Amir_1666 a341bb4daccd09923baad8f71706f568 462 PRINTS PR00364 Disease resistance protein signature 324 338 6.5E-9 T 14-10-2018 Amir_1666 a341bb4daccd09923baad8f71706f568 462 PRINTS PR00364 Disease resistance protein signature 237 251 6.5E-9 T 14-10-2018 Amir_1666 a341bb4daccd09923baad8f71706f568 462 PRINTS PR00364 Disease resistance protein signature 166 181 6.5E-9 T 14-10-2018 Amir_1666 a341bb4daccd09923baad8f71706f568 462 SUPERFAMILY SSF47413 33 78 7.51E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1666 a341bb4daccd09923baad8f71706f568 462 Pfam PF00931 NB-ARC domain 165 338 2.5E-6 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 Amir_1666 a341bb4daccd09923baad8f71706f568 462 Gene3D G3DSA:1.10.260.40 13 97 1.5E-5 T 14-10-2018 Amir_1666 a341bb4daccd09923baad8f71706f568 462 SUPERFAMILY SSF52540 108 387 2.62E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1666 a341bb4daccd09923baad8f71706f568 462 SMART SM00530 18 80 3.8E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_3518 3c54ee52901f99ad0b54b990850ead32 1306 SUPERFAMILY SSF52540 71 598 1.19E-106 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3518 3c54ee52901f99ad0b54b990850ead32 1306 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 10 1301 0.0 T 14-10-2018 IPR010222 RNA helicase HrpA GO:0004004 Amir_3518 3c54ee52901f99ad0b54b990850ead32 1306 Pfam PF00271 Helicase conserved C-terminal domain 286 403 1.2E-8 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_3518 3c54ee52901f99ad0b54b990850ead32 1306 SMART SM00490 304 404 4.7E-13 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_3518 3c54ee52901f99ad0b54b990850ead32 1306 Pfam PF11898 Domain of unknown function (DUF3418) 722 1302 5.0E-218 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal Amir_3518 3c54ee52901f99ad0b54b990850ead32 1306 SMART SM00847 464 556 1.1E-35 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 Amir_3518 3c54ee52901f99ad0b54b990850ead32 1306 Gene3D G3DSA:1.20.120.1080 451 549 9.8E-20 T 14-10-2018 Amir_3518 3c54ee52901f99ad0b54b990850ead32 1306 Pfam PF00270 DEAD/DEAH box helicase 81 230 6.4E-6 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amir_3518 3c54ee52901f99ad0b54b990850ead32 1306 SMART SM00382 89 384 4.4E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3518 3c54ee52901f99ad0b54b990850ead32 1306 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 619 708 8.3E-17 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 Amir_3518 3c54ee52901f99ad0b54b990850ead32 1306 SMART SM00487 72 256 1.2E-26 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_3518 3c54ee52901f99ad0b54b990850ead32 1306 Gene3D G3DSA:3.40.50.300 28 249 1.6E-76 T 14-10-2018 Amir_3518 3c54ee52901f99ad0b54b990850ead32 1306 Pfam PF04408 Helicase associated domain (HA2) 466 560 3.5E-18 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 Amir_3518 3c54ee52901f99ad0b54b990850ead32 1306 Gene3D G3DSA:3.40.50.300 250 420 5.2E-54 T 14-10-2018 Amir_1800 db281ecc75b657763754e24210f8cc67 247 Gene3D G3DSA:3.60.21.10 1 226 2.2E-15 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Amir_1800 db281ecc75b657763754e24210f8cc67 247 PIRSF PIRSF008292 1 235 2.8E-90 T 14-10-2018 IPR016538 Uncharacterised conserved protein UCP008292 Amir_1800 db281ecc75b657763754e24210f8cc67 247 SUPERFAMILY SSF56300 2 224 3.66E-30 T 14-10-2018 Amir_1800 db281ecc75b657763754e24210f8cc67 247 Pfam PF00149 Calcineurin-like phosphoesterase 2 204 5.8E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amir_4324 834025ac66e0a0c9f636a6ac329d7e4e 436 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 256 297 4.9E-6 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_4324 834025ac66e0a0c9f636a6ac329d7e4e 436 Pfam PF17210 SdrD B-like domain 132 244 9.5E-27 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_4324 834025ac66e0a0c9f636a6ac329d7e4e 436 Pfam PF17210 SdrD B-like domain 30 106 4.2E-11 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_4324 834025ac66e0a0c9f636a6ac329d7e4e 436 SUPERFAMILY SSF117074 123 205 3.4E-18 T 14-10-2018 Amir_4324 834025ac66e0a0c9f636a6ac329d7e4e 436 Gene3D G3DSA:2.60.40.10 24 129 5.3E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_4324 834025ac66e0a0c9f636a6ac329d7e4e 436 Gene3D G3DSA:2.60.40.10 130 251 1.3E-30 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_4324 834025ac66e0a0c9f636a6ac329d7e4e 436 SUPERFAMILY SSF117074 28 108 7.98E-15 T 14-10-2018 Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 SUPERFAMILY SSF81296 1129 1226 6.16E-14 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 Gene3D G3DSA:3.20.20.80 60 502 9.6E-102 T 14-10-2018 Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 SUPERFAMILY SSF49452 731 828 2.29E-29 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 SUPERFAMILY SSF51445 68 473 1.06E-82 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 Gene3D G3DSA:2.60.40.1110 895 1000 1.8E-25 T 14-10-2018 Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 Pfam PF11852 Domain of unknown function (DUF3372) 1708 1853 6.0E-32 T 14-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 SUPERFAMILY SSF81296 1014 1118 2.38E-14 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 Gene3D G3DSA:2.60.40.10 1120 1224 4.6E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 Pfam PF00128 Alpha amylase, catalytic domain 108 473 2.7E-71 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 1060 1819 1.9E-263 T 14-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 Gene3D G3DSA:2.60.40.1130 1019 1119 1.1E-11 T 14-10-2018 Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 SUPERFAMILY SSF51011 1769 1854 2.01E-9 T 14-10-2018 Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 Pfam PF03714 Bacterial pullanase-associated domain 734 825 1.7E-22 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 Pfam PF03714 Bacterial pullanase-associated domain 908 999 1.8E-18 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 1129 1210 6.9E-10 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 SMART SM00642 70 525 1.9E-85 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 Gene3D G3DSA:2.60.40.1180 529 613 7.3E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 SUPERFAMILY SSF51445 1224 1768 1.56E-122 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 Gene3D G3DSA:2.60.40.1110 727 829 4.4E-27 T 14-10-2018 Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 Gene3D G3DSA:3.20.20.80 1225 1797 2.4E-205 T 14-10-2018 Amir_1170 0ba5f649955a8ebf7ceed05a551dcc7a 1855 SUPERFAMILY SSF49452 899 999 1.44E-28 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Amir_2444 8656731908f075b55ec5b0333411937f 312 Pfam PF13602 Zinc-binding dehydrogenase 187 309 2.4E-21 T 14-10-2018 Amir_2444 8656731908f075b55ec5b0333411937f 312 Gene3D G3DSA:3.40.50.720 125 280 6.3E-82 T 14-10-2018 Amir_2444 8656731908f075b55ec5b0333411937f 312 SUPERFAMILY SSF51735 117 286 1.28E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2444 8656731908f075b55ec5b0333411937f 312 Gene3D G3DSA:3.90.180.10 8 309 6.3E-82 T 14-10-2018 Amir_2444 8656731908f075b55ec5b0333411937f 312 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 145 166 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Amir_2444 8656731908f075b55ec5b0333411937f 312 SUPERFAMILY SSF50129 1 150 1.83E-31 T 14-10-2018 IPR011032 GroES-like superfamily Amir_2444 8656731908f075b55ec5b0333411937f 312 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 88 1.2E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_2444 8656731908f075b55ec5b0333411937f 312 SMART SM00829 10 309 1.4E-13 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_1731 2e831760d20f1126e61e7495d129bd74 364 Gene3D G3DSA:3.30.360.10 136 300 2.7E-81 T 14-10-2018 Amir_1731 2e831760d20f1126e61e7495d129bd74 364 SUPERFAMILY SSF55347 137 270 9.81E-16 T 14-10-2018 Amir_1731 2e831760d20f1126e61e7495d129bd74 364 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 13 130 2.1E-22 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amir_1731 2e831760d20f1126e61e7495d129bd74 364 Gene3D G3DSA:3.40.50.720 14 333 2.7E-81 T 14-10-2018 Amir_1731 2e831760d20f1126e61e7495d129bd74 364 SUPERFAMILY SSF51735 8 159 8.92E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1119 aaa3200851928e13c11a5d9d394dc282 350 SMART SM00354 8 80 2.3E-8 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1119 aaa3200851928e13c11a5d9d394dc282 350 Pfam PF13377 Periplasmic binding protein-like domain 175 346 1.4E-33 T 14-10-2018 Amir_1119 aaa3200851928e13c11a5d9d394dc282 350 SUPERFAMILY SSF47413 7 67 2.72E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1119 aaa3200851928e13c11a5d9d394dc282 350 Gene3D G3DSA:3.40.50.2300 63 322 7.9E-59 T 14-10-2018 Amir_1119 aaa3200851928e13c11a5d9d394dc282 350 SUPERFAMILY SSF53822 81 340 7.25E-46 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_1119 aaa3200851928e13c11a5d9d394dc282 350 Gene3D G3DSA:3.40.50.2300 167 307 7.9E-59 T 14-10-2018 Amir_1119 aaa3200851928e13c11a5d9d394dc282 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 53 3.0E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1119 aaa3200851928e13c11a5d9d394dc282 350 Gene3D G3DSA:1.10.260.40 1 62 3.2E-15 T 14-10-2018 Amir_2623 6fb817878a83b5504dceb029b01343e5 444 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 7 441 1.3E-108 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Amir_2623 6fb817878a83b5504dceb029b01343e5 444 Gene3D G3DSA:3.20.20.30 4 444 2.4E-109 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_2623 6fb817878a83b5504dceb029b01343e5 444 Pfam PF00296 Luciferase-like monooxygenase 21 395 7.8E-49 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_2623 6fb817878a83b5504dceb029b01343e5 444 PIRSF PIRSF000337 3 444 1.8E-103 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Amir_2623 6fb817878a83b5504dceb029b01343e5 444 SUPERFAMILY SSF51679 4 443 6.93E-93 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_6138 59856698fa1290ae484ffb2990087349 548 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 6 512 1.3E-241 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6138 59856698fa1290ae484ffb2990087349 548 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 95 6.4E-10 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amir_6138 59856698fa1290ae484ffb2990087349 548 Gene3D G3DSA:2.40.30.20 4 96 1.4E-27 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amir_6138 59856698fa1290ae484ffb2990087349 548 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 4 512 48.481 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6138 59856698fa1290ae484ffb2990087349 548 SUPERFAMILY SSF47917 383 511 2.88E-45 T 14-10-2018 Amir_6138 59856698fa1290ae484ffb2990087349 548 Gene3D G3DSA:1.20.150.20 383 513 2.9E-50 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6138 59856698fa1290ae484ffb2990087349 548 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 152 375 1.4E-66 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amir_6138 59856698fa1290ae484ffb2990087349 548 Gene3D G3DSA:3.40.50.300 97 382 8.9E-116 T 14-10-2018 Amir_6138 59856698fa1290ae484ffb2990087349 548 SUPERFAMILY SSF52540 99 381 6.57E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6138 59856698fa1290ae484ffb2990087349 548 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amir_6138 59856698fa1290ae484ffb2990087349 548 SUPERFAMILY SSF50615 14 97 3.14E-23 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amir_6138 59856698fa1290ae484ffb2990087349 548 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 9.5E-46 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_1540 3a9a4a512291f9f756c32da797cedda5 137 SUPERFAMILY SSF88723 5 127 4.21E-19 T 14-10-2018 IPR029060 PIN-like domain superfamily Amir_1540 3a9a4a512291f9f756c32da797cedda5 137 Gene3D G3DSA:3.40.50.1010 4 133 1.1E-24 T 14-10-2018 Amir_1540 3a9a4a512291f9f756c32da797cedda5 137 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 7 131 10.133 T 14-10-2018 IPR022907 VapC family GO:0004540 Amir_1540 3a9a4a512291f9f756c32da797cedda5 137 Pfam PF01850 PIN domain 8 122 3.1E-7 T 14-10-2018 IPR002716 PIN domain Amir_0909 858b7a7de1070c93c53bb77b671de559 447 SUPERFAMILY SSF55931 108 444 2.65E-117 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amir_0909 858b7a7de1070c93c53bb77b671de559 447 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 234 249 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Amir_0909 858b7a7de1070c93c53bb77b671de559 447 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 99 5.6E-25 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Amir_0909 858b7a7de1070c93c53bb77b671de559 447 SUPERFAMILY SSF54368 8 104 5.36E-28 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_0909 858b7a7de1070c93c53bb77b671de559 447 Gene3D G3DSA:3.10.20.70 2 108 2.6E-33 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_0909 858b7a7de1070c93c53bb77b671de559 447 Gene3D G3DSA:3.30.590.10 109 445 1.9E-121 T 14-10-2018 Amir_0909 858b7a7de1070c93c53bb77b671de559 447 SMART SM01230 106 357 5.3E-127 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_0909 858b7a7de1070c93c53bb77b671de559 447 Pfam PF00120 Glutamine synthetase, catalytic domain 107 441 1.5E-127 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF00550 Phosphopantetheine attachment site 3171 3231 6.8E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF00550 Phosphopantetheine attachment site 4226 4288 1.7E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF00550 Phosphopantetheine attachment site 2015 2081 3.1E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF51735 1520 1694 9.54E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF00975 Thioesterase domain 4313 4582 1.3E-25 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF53474 4291 4589 5.73E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF00501 AMP-binding enzyme 2617 3062 3.9E-101 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF00501 AMP-binding enzyme 3718 4114 5.1E-74 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF52151 551 838 5.75E-64 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF47336 3164 3233 1.96E-14 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF47336 4217 4289 5.5E-12 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF14765 Polyketide synthase dehydratase 913 1224 3.1E-49 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SMART SM00823 Phosphopantetheine attachment site 2013 2085 1.4E-24 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SMART SM00823 Phosphopantetheine attachment site 4223 4293 0.06 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SMART SM00823 Phosphopantetheine attachment site 3169 3237 0.04 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SMART SM00826 913 1076 2.6E-69 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SMART SM00824 Thioesterase 4321 4590 2.7E-6 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SMART SM00829 1419 1723 4.8E-135 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SMART SM00825 Beta-ketoacyl synthase 27 454 1.8E-188 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.40.50.12780 2608 3054 1.9E-124 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.30.70.3290 471 898 1.1E-157 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.90.180.10 1438 1722 3.9E-89 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 187 203 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF56801 2578 3181 1.2E-151 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.10.129.110 1123 1230 2.7E-29 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.10.129.110 904 1109 9.0E-64 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 282 399 4.4E-41 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.40.50.12780 3706 4108 8.1E-109 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF52777 3462 3709 1.11E-29 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF00698 Acyl transferase domain 552 869 1.5E-86 T 14-10-2018 IPR014043 Acyl transferase Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 1440 1498 7.7E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.40.50.720 1231 1437 1.7E-22 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.40.50.720 1532 1670 3.9E-89 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2643 3086 7.1E-125 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_4604 30cb80d6c175ba422357ab2257264307 4607 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3738 4132 3.1E-101 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF47336 2005 2097 3.93E-20 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.30.300.30 4109 4211 2.6E-22 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF52777 2347 2584 5.89E-27 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3854 3865 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:1.10.1200.10 1996 2087 4.3E-28 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF55048 676 741 1.7E-12 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF53901 23 398 1.65E-92 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.30.559.10 2171 2362 8.2E-28 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3193 3208 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF00668 Condensation domain 3265 3702 3.6E-36 T 14-10-2018 IPR001242 Condensation domain Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF00668 Condensation domain 2168 2596 4.5E-29 T 14-10-2018 IPR001242 Condensation domain Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.40.366.10 551 855 1.1E-157 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2796 2807 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF51735 1728 1955 2.6E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 25 274 6.8E-80 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.30.559.30 2368 2589 2.3E-30 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF52777 2171 2329 1.67E-25 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 402 521 3.0E-19 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF08659 KR domain 1733 1912 1.4E-56 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF13602 Zinc-binding dehydrogenase 1592 1723 2.5E-17 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF56801 3710 4234 5.89E-117 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Pfam PF13193 AMP-binding enzyme C-terminal domain 3070 3145 7.9E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.40.47.10 16 470 4.5E-175 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF52777 3264 3444 1.22E-24 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.30.300.30 3057 3159 5.3E-30 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1733 1913 3.1E-55 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF50129 1434 1550 6.85E-24 T 14-10-2018 IPR011032 GroES-like superfamily Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.30.559.10 3271 3645 5.2E-61 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:1.10.1200.10 4212 4296 4.2E-16 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:1.10.1200.10 3160 3238 1.6E-20 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SUPERFAMILY SSF51735 1233 1395 9.05E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.40.50.720 1726 1973 1.5E-68 T 14-10-2018 Amir_4604 30cb80d6c175ba422357ab2257264307 4607 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 553 852 2.2E-115 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4604 30cb80d6c175ba422357ab2257264307 4607 Gene3D G3DSA:3.30.559.30 3460 3703 5.2E-61 T 14-10-2018 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SUPERFAMILY SSF47336 958 1064 9.55E-15 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SUPERFAMILY SSF52151 1614 1908 2.33E-61 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Gene3D G3DSA:3.40.47.10 4 427 3.3E-157 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2428 2608 3.9E-55 T 14-10-2018 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SMART SM00825 Beta-ketoacyl synthase 1051 1476 1.4E-208 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SMART SM00825 Beta-ketoacyl synthase 15 415 1.9E-158 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Pfam PF14765 Polyketide synthase dehydratase 1977 2246 1.3E-48 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Gene3D G3DSA:3.30.70.3290 1533 1966 1.3E-139 T 14-10-2018 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SUPERFAMILY SSF51735 2426 2650 4.15E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1426 1582 4.4E-13 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 366 416 3.5E-9 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Pfam PF00698 Acyl transferase domain 583 898 6.8E-80 T 14-10-2018 IPR014043 Acyl transferase Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Pfam PF00698 Acyl transferase domain 1615 1908 9.3E-53 T 14-10-2018 IPR014043 Acyl transferase Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Gene3D G3DSA:3.10.129.110 1971 2254 1.5E-85 T 14-10-2018 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 250 363 4.0E-36 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1307 1423 2.2E-41 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Gene3D G3DSA:3.40.50.720 2255 2674 4.9E-110 T 14-10-2018 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SMART SM00826 1977 2139 4.8E-58 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SMART SM00823 Phosphopantetheine attachment site 960 1032 3.9E-19 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SMART SM00823 Phosphopantetheine attachment site 2704 2776 5.3E-21 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SUPERFAMILY SSF55048 707 772 3.14E-11 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Pfam PF00550 Phosphopantetheine attachment site 2706 2772 1.1E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Pfam PF00550 Phosphopantetheine attachment site 962 1026 1.4E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 584 881 5.0E-103 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1617 1919 1.3E-99 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Gene3D G3DSA:3.40.366.10 1615 1922 1.3E-139 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Gene3D G3DSA:3.40.366.10 582 884 6.8E-146 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1049 1299 1.3E-82 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 13 241 1.5E-64 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SUPERFAMILY SSF53901 10 410 1.0E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1212 1228 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Gene3D G3DSA:3.40.47.10 1049 1497 7.3E-188 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Gene3D G3DSA:3.30.70.3290 482 926 6.8E-146 T 14-10-2018 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SUPERFAMILY SSF47336 2698 2782 5.5E-19 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Gene3D G3DSA:1.10.1200.10 942 1031 2.3E-20 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Gene3D G3DSA:1.10.1200.10 2684 2777 7.5E-28 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SUPERFAMILY SSF52151 582 871 1.26E-59 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SUPERFAMILY SSF53901 1047 1413 8.76E-99 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SUPERFAMILY SSF55048 1752 1815 1.96E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SMART SM01294 961 1028 0.0071 T 14-10-2018 Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 SUPERFAMILY SSF51735 2256 2414 1.14E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4443 00ef5f2346b825f57004ccc135f988e5 2847 Pfam PF08659 KR domain 2428 2606 1.4E-57 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3524 f1a1553db3636c828ada167948a389db 321 Gene3D G3DSA:3.20.20.100 1 320 2.5E-101 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3524 f1a1553db3636c828ada167948a389db 321 Pfam PF00248 Aldo/keto reductase family 15 307 7.9E-63 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_3524 f1a1553db3636c828ada167948a389db 321 SUPERFAMILY SSF51430 2 308 2.23E-88 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_0363 906a0c01671c9b0b21ef2d6a95fe47f5 230 Gene3D G3DSA:3.90.550.10 2 228 8.8E-70 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0363 906a0c01671c9b0b21ef2d6a95fe47f5 230 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 225 3.4E-63 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Amir_0363 906a0c01671c9b0b21ef2d6a95fe47f5 230 SUPERFAMILY SSF53448 3 225 3.96E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0363 906a0c01671c9b0b21ef2d6a95fe47f5 230 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3 225 9.6E-62 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Amir_0363 906a0c01671c9b0b21ef2d6a95fe47f5 230 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Amir_0363 906a0c01671c9b0b21ef2d6a95fe47f5 230 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 225 40.269 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Amir_2727 1cba698d31e85be5fbbc068c4c7e2f7c 503 Gene3D G3DSA:3.60.120.10 11 121 6.3E-7 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Amir_2727 1cba698d31e85be5fbbc068c4c7e2f7c 503 Pfam PF00425 chorismate binding enzyme 228 489 2.1E-67 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Amir_2727 1cba698d31e85be5fbbc068c4c7e2f7c 503 SUPERFAMILY SSF56322 210 498 7.59E-86 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Amir_2727 1cba698d31e85be5fbbc068c4c7e2f7c 503 Gene3D G3DSA:3.60.120.10 201 502 9.8E-104 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Amir_2727 1cba698d31e85be5fbbc068c4c7e2f7c 503 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 224 497 4.7E-75 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 SUPERFAMILY SSF50447 207 304 4.57E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 SUPERFAMILY SSF52540 9 228 2.58E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 SUPERFAMILY SSF50465 305 397 8.92E-37 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 3.1E-56 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 59.046 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 Gene3D G3DSA:3.40.50.300 1 205 1.4E-68 T 14-10-2018 Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 PRINTS PR00315 GTP-binding elongation factor signature 133 142 2.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 PRINTS PR00315 GTP-binding elongation factor signature 60 68 2.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 PRINTS PR00315 GTP-binding elongation factor signature 96 107 2.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 PRINTS PR00315 GTP-binding elongation factor signature 80 90 2.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 Pfam PF03143 Elongation factor Tu C-terminal domain 302 395 9.2E-34 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 3.3E-13 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 Gene3D G3DSA:2.40.30.10 341 396 9.9E-29 T 14-10-2018 Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 Pfam PF03144 Elongation factor Tu domain 2 227 296 4.7E-19 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 397 2.0E-219 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amir_6616 f699f321ffc2893afb1afdb68bca53f3 397 Gene3D G3DSA:2.40.30.10 208 337 1.1E-53 T 14-10-2018 Amir_6612 8a12a1afdc95f2c99a5cb7e62fa91d46 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 6 96 21.256 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Amir_6612 8a12a1afdc95f2c99a5cb7e62fa91d46 99 Pfam PF00276 Ribosomal protein L23 7 89 2.4E-31 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Amir_6612 8a12a1afdc95f2c99a5cb7e62fa91d46 99 ProSitePatterns PS00050 Ribosomal protein L23 signature. 78 93 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6612 8a12a1afdc95f2c99a5cb7e62fa91d46 99 Gene3D G3DSA:3.30.70.330 4 96 1.1E-31 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Amir_6612 8a12a1afdc95f2c99a5cb7e62fa91d46 99 SUPERFAMILY SSF54189 4 92 9.71E-32 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_0994 439e7c8d983452435328e687b5ca66e9 470 SMART SM00155 157 184 0.084 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Amir_0994 439e7c8d983452435328e687b5ca66e9 470 SMART SM00155 355 382 0.0057 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Amir_0994 439e7c8d983452435328e687b5ca66e9 470 Gene3D G3DSA:3.30.870.10 249 409 1.8E-18 T 14-10-2018 Amir_0994 439e7c8d983452435328e687b5ca66e9 470 Gene3D G3DSA:3.30.870.10 47 248 1.9E-29 T 14-10-2018 Amir_0994 439e7c8d983452435328e687b5ca66e9 470 Pfam PF00614 Phospholipase D Active site motif 161 181 8.3E-8 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Amir_0994 439e7c8d983452435328e687b5ca66e9 470 Pfam PF13091 PLD-like domain 275 400 1.9E-10 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Amir_0994 439e7c8d983452435328e687b5ca66e9 470 SUPERFAMILY SSF56024 48 255 7.85E-34 T 14-10-2018 Amir_0994 439e7c8d983452435328e687b5ca66e9 470 SUPERFAMILY SSF56024 266 415 2.69E-22 T 14-10-2018 Amir_6904 e2a394f814649d7dbcd682cc74e31978 329 SUPERFAMILY SSF53850 45 325 3.86E-62 T 14-10-2018 Amir_6904 e2a394f814649d7dbcd682cc74e31978 329 Gene3D G3DSA:3.40.190.10 48 323 1.0E-83 T 14-10-2018 Amir_6904 e2a394f814649d7dbcd682cc74e31978 329 Gene3D G3DSA:3.40.190.10 130 268 1.0E-83 T 14-10-2018 Amir_6904 e2a394f814649d7dbcd682cc74e31978 329 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 323 4.8E-82 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Amir_6904 e2a394f814649d7dbcd682cc74e31978 329 Pfam PF16868 NMT1-like family 48 323 5.8E-69 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Amir_4177 175e892bdf9559a5ba8956043a678b96 430 Pfam PF03211 Pectate lyase 217 404 3.6E-72 T 14-10-2018 IPR004898 Pectate lyase PlyH/PlyE-like GO:0005576|GO:0030570 KEGG: 00040+4.2.2.2 Amir_4177 175e892bdf9559a5ba8956043a678b96 430 Gene3D G3DSA:2.160.20.10 220 430 1.5E-71 T 14-10-2018 IPR012334 Pectin lyase fold Amir_4177 175e892bdf9559a5ba8956043a678b96 430 Pfam PF00652 Ricin-type beta-trefoil lectin domain 49 173 9.3E-19 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4177 175e892bdf9559a5ba8956043a678b96 430 SMART SM00458 46 177 4.7E-15 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4177 175e892bdf9559a5ba8956043a678b96 430 SUPERFAMILY SSF51126 218 391 1.86E-52 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_4177 175e892bdf9559a5ba8956043a678b96 430 SUPERFAMILY SSF50370 43 177 7.98E-28 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_4177 175e892bdf9559a5ba8956043a678b96 430 Gene3D G3DSA:2.80.10.50 132 219 1.6E-8 T 14-10-2018 Amir_4177 175e892bdf9559a5ba8956043a678b96 430 Gene3D G3DSA:2.80.10.50 38 131 1.1E-16 T 14-10-2018 Amir_2520 764309b010113d6d5cc1cb8e31b9ad09 283 Gene3D G3DSA:2.60.120.620 155 270 2.7E-8 T 14-10-2018 Amir_2520 764309b010113d6d5cc1cb8e31b9ad09 283 SUPERFAMILY SSF51197 162 270 7.14E-5 T 14-10-2018 Amir_2520 764309b010113d6d5cc1cb8e31b9ad09 283 SMART SM00702 47 271 0.004 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 Amir_2520 764309b010113d6d5cc1cb8e31b9ad09 283 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 159 267 3.0E-8 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 Amir_5225 08d24415d1e5d7b20166b13038c950ba 181 Pfam PF01327 Polypeptide deformylase 4 150 4.6E-42 T 14-10-2018 IPR023635 Peptide deformylase Amir_5225 08d24415d1e5d7b20166b13038c950ba 181 PRINTS PR01576 Peptide deformylase signature 87 98 4.1E-30 T 14-10-2018 IPR023635 Peptide deformylase Amir_5225 08d24415d1e5d7b20166b13038c950ba 181 PRINTS PR01576 Peptide deformylase signature 33 62 4.1E-30 T 14-10-2018 IPR023635 Peptide deformylase Amir_5225 08d24415d1e5d7b20166b13038c950ba 181 PRINTS PR01576 Peptide deformylase signature 99 117 4.1E-30 T 14-10-2018 IPR023635 Peptide deformylase Amir_5225 08d24415d1e5d7b20166b13038c950ba 181 PRINTS PR01576 Peptide deformylase signature 118 147 4.1E-30 T 14-10-2018 IPR023635 Peptide deformylase Amir_5225 08d24415d1e5d7b20166b13038c950ba 181 SUPERFAMILY SSF56420 3 170 1.96E-53 T 14-10-2018 IPR036821 Peptide deformylase superfamily Amir_5225 08d24415d1e5d7b20166b13038c950ba 181 PIRSF PIRSF004749 1 167 8.3E-42 T 14-10-2018 IPR023635 Peptide deformylase Amir_5225 08d24415d1e5d7b20166b13038c950ba 181 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 9 156 3.8E-36 T 14-10-2018 IPR023635 Peptide deformylase Amir_5225 08d24415d1e5d7b20166b13038c950ba 181 Gene3D G3DSA:3.90.45.10 1 179 5.3E-52 T 14-10-2018 IPR036821 Peptide deformylase superfamily Amir_5225 08d24415d1e5d7b20166b13038c950ba 181 Hamap MF_00163 Peptide deformylase [def]. 2 160 27.224 T 14-10-2018 IPR023635 Peptide deformylase Amir_3757 4b75370672d6a388bede2bfb40b33556 206 Gene3D G3DSA:1.10.357.10 56 200 3.7E-16 T 14-10-2018 Amir_3757 4b75370672d6a388bede2bfb40b33556 206 SUPERFAMILY SSF48498 76 196 1.65E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3757 4b75370672d6a388bede2bfb40b33556 206 SUPERFAMILY SSF46689 6 66 3.03E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3757 4b75370672d6a388bede2bfb40b33556 206 Pfam PF16859 Bacterial transcriptional repressor C-terminal 74 189 4.4E-13 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Amir_3757 4b75370672d6a388bede2bfb40b33556 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 6.7E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3757 4b75370672d6a388bede2bfb40b33556 206 Gene3D G3DSA:1.10.10.60 3 55 1.3E-19 T 14-10-2018 Amir_6750 9ab6e69c5e353db5c865d27e314527f0 394 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 321 2.6E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_6750 9ab6e69c5e353db5c865d27e314527f0 394 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 346 2.6E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_6750 9ab6e69c5e353db5c865d27e314527f0 394 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 365 2.6E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_6750 9ab6e69c5e353db5c865d27e314527f0 394 PRINTS PR00344 Bacterial sensor protein C-terminal signature 293 307 2.6E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_6750 9ab6e69c5e353db5c865d27e314527f0 394 SUPERFAMILY SSF47384 138 209 3.92E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_6750 9ab6e69c5e353db5c865d27e314527f0 394 Gene3D G3DSA:3.30.565.10 218 374 1.3E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6750 9ab6e69c5e353db5c865d27e314527f0 394 Gene3D G3DSA:1.10.287.130 138 210 1.5E-16 T 14-10-2018 Amir_6750 9ab6e69c5e353db5c865d27e314527f0 394 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 256 367 4.5E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_6750 9ab6e69c5e353db5c865d27e314527f0 394 SMART SM00388 145 211 4.3E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_6750 9ab6e69c5e353db5c865d27e314527f0 394 Pfam PF00512 His Kinase A (phospho-acceptor) domain 146 210 1.7E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_6750 9ab6e69c5e353db5c865d27e314527f0 394 SMART SM00387 256 368 2.4E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_6750 9ab6e69c5e353db5c865d27e314527f0 394 SUPERFAMILY SSF55874 201 366 1.44E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6125 18b6421892421fa290d2ff4b2a375163 178 Pfam PF00293 NUDIX domain 41 157 5.0E-9 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_6125 18b6421892421fa290d2ff4b2a375163 178 SUPERFAMILY SSF55811 2 173 2.84E-37 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_6125 18b6421892421fa290d2ff4b2a375163 178 Gene3D G3DSA:3.90.79.10 1 177 9.4E-42 T 14-10-2018 Amir_3552 89dace665efcd185f212aa3eb3bd46e3 315 SUPERFAMILY SSF53474 21 284 4.45E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3552 89dace665efcd185f212aa3eb3bd46e3 315 Gene3D G3DSA:3.40.50.1820 10 287 3.2E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3552 89dace665efcd185f212aa3eb3bd46e3 315 Pfam PF12697 Alpha/beta hydrolase family 27 278 1.3E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_5841 790d65828bea53af8a86c47fa986881e 333 Gene3D G3DSA:3.40.640.10 25 262 3.8E-42 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_5841 790d65828bea53af8a86c47fa986881e 333 Pfam PF00266 Aminotransferase class-V 128 279 2.6E-5 T 14-10-2018 IPR000192 Aminotransferase class V domain Amir_5841 790d65828bea53af8a86c47fa986881e 333 Gene3D G3DSA:3.90.1150.10 15 328 3.8E-42 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_5841 790d65828bea53af8a86c47fa986881e 333 SUPERFAMILY SSF53383 15 332 1.28E-38 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_5059 3390bc2c2f3ef8905f3417d2ab7b359e 475 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 31 185 4.2E-29 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_5059 3390bc2c2f3ef8905f3417d2ab7b359e 475 Gene3D G3DSA:3.40.50.720 7 282 9.9E-86 T 14-10-2018 Amir_5059 3390bc2c2f3ef8905f3417d2ab7b359e 475 SUPERFAMILY SSF48179 284 471 8.84E-37 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_5059 3390bc2c2f3ef8905f3417d2ab7b359e 475 SUPERFAMILY SSF51735 16 282 5.51E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5059 3390bc2c2f3ef8905f3417d2ab7b359e 475 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 219 231 - T 14-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Amir_5059 3390bc2c2f3ef8905f3417d2ab7b359e 475 Gene3D G3DSA:1.10.1040.10 283 475 1.6E-41 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amir_5059 3390bc2c2f3ef8905f3417d2ab7b359e 475 PRINTS PR00084 Mannitol dehydrogenase signature 219 232 9.7E-12 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Amir_5059 3390bc2c2f3ef8905f3417d2ab7b359e 475 PRINTS PR00084 Mannitol dehydrogenase signature 249 264 9.7E-12 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Amir_5059 3390bc2c2f3ef8905f3417d2ab7b359e 475 PRINTS PR00084 Mannitol dehydrogenase signature 32 42 9.7E-12 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Amir_5059 3390bc2c2f3ef8905f3417d2ab7b359e 475 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 218 427 4.3E-52 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 Amir_2133 109966c405be960156da1a7a31c09feb 278 SUPERFAMILY SSF52540 29 216 1.72E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2133 109966c405be960156da1a7a31c09feb 278 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_2133 109966c405be960156da1a7a31c09feb 278 SMART SM00382 54 226 2.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2133 109966c405be960156da1a7a31c09feb 278 Gene3D G3DSA:3.40.50.300 25 240 4.2E-34 T 14-10-2018 Amir_2133 109966c405be960156da1a7a31c09feb 278 Pfam PF00005 ABC transporter 45 169 1.3E-13 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0425 a1820eb52aa62a9f11a6672c41d31d39 547 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 85 511 96.239 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Amir_0425 a1820eb52aa62a9f11a6672c41d31d39 547 Pfam PF01964 Radical SAM ThiC family 86 506 2.2E-198 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Amir_0425 a1820eb52aa62a9f11a6672c41d31d39 547 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 86 509 6.7E-206 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Amir_0425 a1820eb52aa62a9f11a6672c41d31d39 547 Gene3D G3DSA:3.20.20.540 128 442 1.0E-149 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Amir_0425 a1820eb52aa62a9f11a6672c41d31d39 547 Pfam PF13667 ThiC-associated domain 18 80 1.1E-11 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Amir_0619 7299142850367cb7744dce7fd61431af 364 PIRSF PIRSF000808 36 364 1.7E-111 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Amir_0619 7299142850367cb7744dce7fd61431af 364 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 177 194 - T 14-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Amir_0619 7299142850367cb7744dce7fd61431af 364 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 213 361 2.0E-21 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Amir_0619 7299142850367cb7744dce7fd61431af 364 SUPERFAMILY SSF54197 41 202 3.4E-52 T 14-10-2018 IPR036265 HIT-like superfamily Amir_0619 7299142850367cb7744dce7fd61431af 364 Gene3D G3DSA:3.30.428.10 74 201 2.9E-96 T 14-10-2018 IPR036265 HIT-like superfamily Amir_0619 7299142850367cb7744dce7fd61431af 364 SUPERFAMILY SSF54197 206 363 9.28E-37 T 14-10-2018 IPR036265 HIT-like superfamily Amir_0619 7299142850367cb7744dce7fd61431af 364 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 46 362 1.6E-51 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Amir_0619 7299142850367cb7744dce7fd61431af 364 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 43 201 6.6E-38 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Amir_0619 7299142850367cb7744dce7fd61431af 364 Gene3D G3DSA:3.30.428.10 45 361 2.9E-96 T 14-10-2018 IPR036265 HIT-like superfamily Amir_2823 e40f77cbcc1e1e0c5a435c297076320c 510 SUPERFAMILY SSF53649 34 482 1.7E-36 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Amir_2823 e40f77cbcc1e1e0c5a435c297076320c 510 Gene3D G3DSA:3.40.720.10 235 499 1.5E-12 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Amir_2823 e40f77cbcc1e1e0c5a435c297076320c 510 Gene3D G3DSA:3.40.720.10 1 194 1.2E-16 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Amir_2823 e40f77cbcc1e1e0c5a435c297076320c 510 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 41 452 2.8E-21 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 Amir_2713 b6328465d1f17a6b64fe6606b1424af7 838 Gene3D G3DSA:3.90.1200.10 35 119 3.2E-13 T 14-10-2018 Amir_2713 b6328465d1f17a6b64fe6606b1424af7 838 Gene3D G3DSA:1.25.40.10 729 838 8.2E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2713 b6328465d1f17a6b64fe6606b1424af7 838 Gene3D G3DSA:1.25.40.10 472 728 1.3E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2713 b6328465d1f17a6b64fe6606b1424af7 838 Pfam PF01636 Phosphotransferase enzyme family 32 115 2.4E-11 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_2713 b6328465d1f17a6b64fe6606b1424af7 838 SUPERFAMILY SSF52540 178 445 2.28E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2713 b6328465d1f17a6b64fe6606b1424af7 838 PRINTS PR00364 Disease resistance protein signature 290 304 2.7E-6 T 14-10-2018 Amir_2713 b6328465d1f17a6b64fe6606b1424af7 838 PRINTS PR00364 Disease resistance protein signature 378 392 2.7E-6 T 14-10-2018 Amir_2713 b6328465d1f17a6b64fe6606b1424af7 838 PRINTS PR00364 Disease resistance protein signature 211 226 2.7E-6 T 14-10-2018 Amir_2713 b6328465d1f17a6b64fe6606b1424af7 838 Gene3D G3DSA:3.40.50.300 174 331 7.6E-31 T 14-10-2018 Amir_2713 b6328465d1f17a6b64fe6606b1424af7 838 SUPERFAMILY SSF48452 627 821 1.59E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2713 b6328465d1f17a6b64fe6606b1424af7 838 SMART SM00028 751 784 38.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2713 b6328465d1f17a6b64fe6606b1424af7 838 SMART SM00028 631 664 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2713 b6328465d1f17a6b64fe6606b1424af7 838 SMART SM00028 791 824 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2713 b6328465d1f17a6b64fe6606b1424af7 838 SMART SM00028 711 744 280.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2713 b6328465d1f17a6b64fe6606b1424af7 838 Pfam PF00931 NB-ARC domain 208 391 2.1E-8 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 Amir_2713 b6328465d1f17a6b64fe6606b1424af7 838 SUPERFAMILY SSF56112 36 118 1.24E-13 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_3306 4f8befea2b89c6946fe24e0f754a1aaf 189 Gene3D G3DSA:1.10.357.10 6 184 4.2E-17 T 14-10-2018 Amir_3306 4f8befea2b89c6946fe24e0f754a1aaf 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3306 4f8befea2b89c6946fe24e0f754a1aaf 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3306 4f8befea2b89c6946fe24e0f754a1aaf 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3306 4f8befea2b89c6946fe24e0f754a1aaf 189 SUPERFAMILY SSF46689 4 68 7.7E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_1662 9b109af8b4de3ce9bb903985a884d13c 185 Pfam PF00075 RNase H 6 142 1.9E-46 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Amir_1662 9b109af8b4de3ce9bb903985a884d13c 185 Gene3D G3DSA:3.30.420.10 2 160 2.6E-55 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amir_1662 9b109af8b4de3ce9bb903985a884d13c 185 Hamap MF_00042 Ribonuclease H [rnhA]. 3 153 31.305 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 Amir_1662 9b109af8b4de3ce9bb903985a884d13c 185 SUPERFAMILY SSF53098 6 142 5.18E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_3033 b93765d463b3732edfb2c506d30ef3ba 895 Gene3D G3DSA:3.90.1140.10 387 545 9.4E-27 T 14-10-2018 Amir_3033 b93765d463b3732edfb2c506d30ef3ba 895 SUPERFAMILY SSF81301 570 655 1.17E-8 T 14-10-2018 Amir_3033 b93765d463b3732edfb2c506d30ef3ba 895 SUPERFAMILY SSF56219 116 358 7.46E-34 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Amir_3033 b93765d463b3732edfb2c506d30ef3ba 895 Gene3D G3DSA:3.60.10.10 113 358 2.1E-39 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Amir_3033 b93765d463b3732edfb2c506d30ef3ba 895 Gene3D G3DSA:1.10.1410.10 665 806 1.7E-16 T 14-10-2018 Amir_3033 b93765d463b3732edfb2c506d30ef3ba 895 SUPERFAMILY SSF81631 687 800 1.91E-15 T 14-10-2018 Amir_3033 b93765d463b3732edfb2c506d30ef3ba 895 Pfam PF04928 Poly(A) polymerase central domain 677 754 5.7E-5 T 14-10-2018 IPR007012 Poly(A) polymerase, central domain GO:0004652|GO:0043631 Amir_3033 b93765d463b3732edfb2c506d30ef3ba 895 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 120 351 3.4E-16 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Amir_3033 b93765d463b3732edfb2c506d30ef3ba 895 Pfam PF01909 Nucleotidyltransferase domain 564 604 4.4E-6 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Amir_3033 b93765d463b3732edfb2c506d30ef3ba 895 Pfam PF13563 2'-5' RNA ligase superfamily 394 529 1.8E-24 T 14-10-2018 Amir_3033 b93765d463b3732edfb2c506d30ef3ba 895 SUPERFAMILY SSF55144 391 544 4.71E-18 T 14-10-2018 IPR009097 Cyclic phosphodiesterase Amir_4705 104650bba8aa52f6b220e401f30583aa 148 SUPERFAMILY SSF46785 27 136 5.66E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4705 104650bba8aa52f6b220e401f30583aa 148 Gene3D G3DSA:1.10.10.10 15 137 7.3E-42 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4705 104650bba8aa52f6b220e401f30583aa 148 Pfam PF01638 HxlR-like helix-turn-helix 38 124 9.9E-27 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type Amir_4969 fbdad3e5ddb533f501e92ad38d198d59 327 Gene3D G3DSA:1.10.730.10 181 323 1.1E-22 T 14-10-2018 Amir_4969 fbdad3e5ddb533f501e92ad38d198d59 327 SUPERFAMILY SSF47323 190 309 1.7E-22 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_5360 212a439c0c019f465c5da3a3ea93de42 138 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 33 130 6.0E-23 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Amir_5360 212a439c0c019f465c5da3a3ea93de42 138 Gene3D G3DSA:3.30.750.24 26 135 4.3E-29 T 14-10-2018 IPR036513 STAS domain superfamily Amir_5360 212a439c0c019f465c5da3a3ea93de42 138 Pfam PF13466 STAS domain 41 119 1.0E-14 T 14-10-2018 IPR002645 STAS domain Amir_5360 212a439c0c019f465c5da3a3ea93de42 138 SUPERFAMILY SSF52091 33 133 4.71E-21 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3818 d3c85e634297ff477cf80171235e9ac4 378 Pfam PF01494 FAD binding domain 8 347 5.2E-16 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_3818 d3c85e634297ff477cf80171235e9ac4 378 Gene3D G3DSA:3.50.50.60 2 367 5.5E-104 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3818 d3c85e634297ff477cf80171235e9ac4 378 SUPERFAMILY SSF51905 5 360 2.27E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3818 d3c85e634297ff477cf80171235e9ac4 378 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 1.5E-18 T 14-10-2018 Amir_3818 d3c85e634297ff477cf80171235e9ac4 378 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.5E-18 T 14-10-2018 Amir_3818 d3c85e634297ff477cf80171235e9ac4 378 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 1.5E-18 T 14-10-2018 Amir_3818 d3c85e634297ff477cf80171235e9ac4 378 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 1.5E-18 T 14-10-2018 Amir_2057 a24fb13953bdb497dc582aefb7918a63 361 SUPERFAMILY SSF52540 4 239 2.86E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2057 a24fb13953bdb497dc582aefb7918a63 361 SUPERFAMILY SSF50331 235 358 7.48E-14 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Amir_2057 a24fb13953bdb497dc582aefb7918a63 361 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_2057 a24fb13953bdb497dc582aefb7918a63 361 Gene3D G3DSA:3.40.50.300 3 219 9.5E-66 T 14-10-2018 Amir_2057 a24fb13953bdb497dc582aefb7918a63 361 Gene3D G3DSA:2.40.50.140 277 351 9.2E-7 T 14-10-2018 Amir_2057 a24fb13953bdb497dc582aefb7918a63 361 SMART SM00382 28 209 6.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2057 a24fb13953bdb497dc582aefb7918a63 361 Pfam PF00005 ABC transporter 19 159 2.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2057 a24fb13953bdb497dc582aefb7918a63 361 Gene3D G3DSA:2.40.50.940 220 356 9.2E-7 T 14-10-2018 Amir_2057 a24fb13953bdb497dc582aefb7918a63 361 Pfam PF08402 TOBE domain 270 358 1.4E-11 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Amir_5923 566c5da64d171e8950c75fe59e2129ba 246 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 229 1.6E-76 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Amir_5923 566c5da64d171e8950c75fe59e2129ba 246 Gene3D G3DSA:1.10.1270.20 166 245 2.1E-29 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Amir_5923 566c5da64d171e8950c75fe59e2129ba 246 PIRSF PIRSF000386 1 242 6.3E-94 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Amir_5923 566c5da64d171e8950c75fe59e2129ba 246 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 246 103.703 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Amir_5923 566c5da64d171e8950c75fe59e2129ba 246 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 22 223 2.4E-67 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Amir_5923 566c5da64d171e8950c75fe59e2129ba 246 Gene3D G3DSA:3.40.1280.10 1 165 7.9E-67 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Amir_5923 566c5da64d171e8950c75fe59e2129ba 246 SUPERFAMILY SSF75217 1 232 3.34E-90 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Amir_0030 ae18ad797ddba989e836bcb1574935bd 425 Gene3D G3DSA:3.30.70.2520 295 387 4.1E-22 T 14-10-2018 Amir_0030 ae18ad797ddba989e836bcb1574935bd 425 Gene3D G3DSA:3.30.465.10 66 189 9.4E-39 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amir_0030 ae18ad797ddba989e836bcb1574935bd 425 Pfam PF04030 D-arabinono-1,4-lactone oxidase 170 423 6.0E-72 T 14-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 Amir_0030 ae18ad797ddba989e836bcb1574935bd 425 TIGRFAM TIGR01679 bact_FAD_ox: FAD-linked oxidoreductase 5 425 4.7E-108 T 14-10-2018 Amir_0030 ae18ad797ddba989e836bcb1574935bd 425 SUPERFAMILY SSF56176 4 175 2.24E-42 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amir_0030 ae18ad797ddba989e836bcb1574935bd 425 Pfam PF01565 FAD binding domain 18 145 2.9E-23 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Amir_0030 ae18ad797ddba989e836bcb1574935bd 425 Gene3D G3DSA:3.30.43.10 2 63 9.3E-16 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Amir_0030 ae18ad797ddba989e836bcb1574935bd 425 PIRSF PIRSF000136 1 425 1.9E-103 T 14-10-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 Amir_0030 ae18ad797ddba989e836bcb1574935bd 425 Gene3D G3DSA:1.10.45.10 388 425 9.0E-10 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Amir_2174 e632412dd1a0c480cadf32e7ff60a2a5 646 SUPERFAMILY SSF48208 188 612 1.46E-70 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_2174 e632412dd1a0c480cadf32e7ff60a2a5 646 Gene3D G3DSA:1.50.10.10 209 562 4.8E-123 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Amir_2174 e632412dd1a0c480cadf32e7ff60a2a5 646 Gene3D G3DSA:2.70.98.50 9 134 1.1E-25 T 14-10-2018 Amir_2174 e632412dd1a0c480cadf32e7ff60a2a5 646 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 10 126 3.6E-23 T 14-10-2018 IPR027414 Glycosyl hydrolase family 95, N-terminal domain KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807 Amir_5248 5cd44d60e15c19405f277208e0011756 139 SUPERFAMILY SSF48013 4 128 7.98E-39 T 14-10-2018 IPR035926 NusB-like superfamily Amir_5248 5cd44d60e15c19405f277208e0011756 139 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 2 133 22.742 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 Amir_5248 5cd44d60e15c19405f277208e0011756 139 Pfam PF01029 NusB family 6 129 1.4E-34 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Amir_5248 5cd44d60e15c19405f277208e0011756 139 Gene3D G3DSA:1.10.940.10 1 129 7.8E-44 T 14-10-2018 IPR035926 NusB-like superfamily Amir_5248 5cd44d60e15c19405f277208e0011756 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 4 129 7.3E-40 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 Amir_4225 1bf99a361a35ebbf0e6aec684df1de0c 632 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 110 405 2.8E-29 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 Amir_4225 1bf99a361a35ebbf0e6aec684df1de0c 632 Gene3D G3DSA:3.20.20.80 52 431 1.9E-69 T 14-10-2018 Amir_4225 1bf99a361a35ebbf0e6aec684df1de0c 632 SUPERFAMILY SSF51445 54 434 7.16E-48 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_4225 1bf99a361a35ebbf0e6aec684df1de0c 632 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 224 233 - T 14-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 Gene3D G3DSA:2.20.25.90 239 291 1.9E-8 T 14-10-2018 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 21 654 4.0E-168 T 14-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 SMART SM00926 238 292 0.0094 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 Gene3D G3DSA:3.10.20.740 17 145 2.4E-31 T 14-10-2018 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 Gene3D G3DSA:2.40.40.20 702 807 5.0E-6 T 14-10-2018 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 Pfam PF00384 Molybdopterin oxidoreductase 514 646 1.3E-9 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 Pfam PF00384 Molybdopterin oxidoreductase 295 439 1.4E-11 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 Gene3D G3DSA:3.40.50.740 300 370 6.0E-17 T 14-10-2018 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 168 178 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 Pfam PF01568 Molydopterin dinucleotide binding domain 728 792 1.1E-8 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 SUPERFAMILY SSF50692 708 791 2.28E-11 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Amir_6676 cd635458b39c0ead4245f998f032c57f 815 Gene3D G3DSA:3.40.50.740 493 698 5.4E-29 T 14-10-2018 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 SUPERFAMILY SSF53706 241 696 1.12E-74 T 14-10-2018 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 SUPERFAMILY SSF54292 18 94 3.07E-16 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 Gene3D G3DSA:3.30.70.20 155 226 9.1E-9 T 14-10-2018 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 18 95 9.3E-15 T 14-10-2018 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 47 64 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 120 132 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 Gene3D G3DSA:3.40.228.10 371 464 6.0E-17 T 14-10-2018 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 SUPERFAMILY SSF54862 98 234 3.1E-31 T 14-10-2018 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 106 144 1.2E-15 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6676 cd635458b39c0ead4245f998f032c57f 815 SMART SM00929 105 145 7.8E-19 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_2782 873797478806a3cdeffa08a086c3be71 294 Gene3D G3DSA:1.10.10.10 3 88 5.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2782 873797478806a3cdeffa08a086c3be71 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 1.7E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_2782 873797478806a3cdeffa08a086c3be71 294 SUPERFAMILY SSF53850 95 292 9.77E-37 T 14-10-2018 Amir_2782 873797478806a3cdeffa08a086c3be71 294 Gene3D G3DSA:3.40.190.10 174 272 7.6E-39 T 14-10-2018 Amir_2782 873797478806a3cdeffa08a086c3be71 294 SUPERFAMILY SSF46785 3 116 1.03E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2782 873797478806a3cdeffa08a086c3be71 294 Gene3D G3DSA:3.40.190.10 96 278 7.6E-39 T 14-10-2018 Amir_2782 873797478806a3cdeffa08a086c3be71 294 Pfam PF03466 LysR substrate binding domain 93 293 3.6E-38 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_5736 c8b72c916787c40f922f697dccf81c2a 431 Pfam PF10821 Protein of unknown function (DUF2567) 283 427 6.1E-9 T 14-10-2018 IPR021213 Protein of unknown function DUF2567 Amir_4044 864eddf5bf8a0cb6627ce7c314f6c629 647 Gene3D G3DSA:2.60.40.2030 347 467 4.9E-21 T 14-10-2018 IPR038081 CalX-like domain superfamily Amir_4044 864eddf5bf8a0cb6627ce7c314f6c629 647 Gene3D G3DSA:3.40.50.410 81 244 4.7E-12 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_4044 864eddf5bf8a0cb6627ce7c314f6c629 647 SUPERFAMILY SSF141072 341 453 2.49E-28 T 14-10-2018 IPR038081 CalX-like domain superfamily Amir_4044 864eddf5bf8a0cb6627ce7c314f6c629 647 SMART SM00237 334 428 1.8E-11 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Amir_4044 864eddf5bf8a0cb6627ce7c314f6c629 647 Pfam PF03160 Calx-beta domain 348 427 1.5E-15 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Amir_4044 864eddf5bf8a0cb6627ce7c314f6c629 647 SUPERFAMILY SSF53300 83 248 4.45E-15 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_5979 17e356bc5a1b6afe7c45f0f4bb5fb224 63 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 63 17.788 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_5979 17e356bc5a1b6afe7c45f0f4bb5fb224 63 SUPERFAMILY SSF143800 2 62 2.55E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5979 17e356bc5a1b6afe7c45f0f4bb5fb224 63 TIGRFAM TIGR00009 L28: ribosomal protein bL28 2 57 1.6E-22 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_5979 17e356bc5a1b6afe7c45f0f4bb5fb224 63 Pfam PF00830 Ribosomal L28 family 4 59 6.5E-23 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5979 17e356bc5a1b6afe7c45f0f4bb5fb224 63 Gene3D G3DSA:2.30.170.40 3 63 1.4E-19 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 Gene3D G3DSA:3.90.1100.10 31 627 0.0 T 14-10-2018 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 Gene3D G3DSA:2.40.50.150 738 864 0.0 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 ProSitePatterns PS01166 RNA polymerases beta chain signature. 866 878 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 Gene3D G3DSA:2.40.270.10 29 1021 0.0 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 Gene3D G3DSA:2.30.150.10 503 570 0.0 T 14-10-2018 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 Gene3D G3DSA:3.90.1110.10 173 357 0.0 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 Gene3D G3DSA:3.90.1800.10 1030 1084 1.7E-10 T 14-10-2018 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 Pfam PF04563 RNA polymerase beta subunit 91 407 7.4E-22 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 Pfam PF04565 RNA polymerase Rpb2, domain 3 422 490 2.0E-28 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 Pfam PF10385 RNA polymerase beta subunit external 1 domain 500 566 2.9E-25 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 Gene3D G3DSA:2.40.50.100 628 702 0.0 T 14-10-2018 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 242 840 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 Pfam PF04561 RNA polymerase Rpb2, domain 2 168 363 9.5E-29 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 Pfam PF00562 RNA polymerase Rpb2, domain 6 627 1043 7.4E-159 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 SUPERFAMILY SSF64484 25 1130 0.0 T 14-10-2018 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 26 1121 12.302 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6627 c89aedbb0bb90da584374ca86de17b34 1160 Pfam PF04560 RNA polymerase Rpb2, domain 7 1045 1119 1.1E-26 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_2250 c88ec94e46c6e654212a91e173fc9b72 321 Pfam PF13280 WYL domain 147 314 3.6E-32 T 14-10-2018 IPR026881 WYL domain Amir_2250 c88ec94e46c6e654212a91e173fc9b72 321 PIRSF PIRSF016838 1 321 1.5E-121 T 14-10-2018 IPR028349 Protein PafC Amir_3357 144b9ad716d5e44a2dc83f1778b1822a 219 SUPERFAMILY SSF55729 114 213 1.03E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_3357 144b9ad716d5e44a2dc83f1778b1822a 219 Gene3D G3DSA:3.40.630.30 21 217 5.1E-17 T 14-10-2018 Amir_3357 144b9ad716d5e44a2dc83f1778b1822a 219 Pfam PF08445 FR47-like protein 156 208 6.2E-5 T 14-10-2018 IPR013653 FR47-like GO:0016747 Amir_5846 88d44ca4e630b9f414318e54d1b92b77 229 Gene3D G3DSA:1.10.150.240 18 82 4.4E-50 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Amir_5846 88d44ca4e630b9f414318e54d1b92b77 229 SUPERFAMILY SSF56784 3 222 8.99E-30 T 14-10-2018 IPR036412 HAD-like superfamily Amir_5846 88d44ca4e630b9f414318e54d1b92b77 229 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 183 9.5E-17 T 14-10-2018 Amir_5846 88d44ca4e630b9f414318e54d1b92b77 229 Gene3D G3DSA:3.40.50.1000 4 211 4.4E-50 T 14-10-2018 IPR023214 HAD superfamily Amir_6142 dccde064fa5751b8066faf3f063c19f6 283 Pfam PF00119 ATP synthase A chain 57 275 6.7E-51 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6142 dccde064fa5751b8066faf3f063c19f6 283 PRINTS PR00123 ATP synthase A subunit signature 262 277 2.9E-16 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6142 dccde064fa5751b8066faf3f063c19f6 283 PRINTS PR00123 ATP synthase A subunit signature 115 131 2.9E-16 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6142 dccde064fa5751b8066faf3f063c19f6 283 PRINTS PR00123 ATP synthase A subunit signature 200 222 2.9E-16 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6142 dccde064fa5751b8066faf3f063c19f6 283 SUPERFAMILY SSF81336 107 276 4.32E-38 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6142 dccde064fa5751b8066faf3f063c19f6 283 Hamap MF_01393 ATP synthase subunit a [atpB]. 35 282 13.975 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6142 dccde064fa5751b8066faf3f063c19f6 283 Gene3D G3DSA:1.20.120.220 106 283 2.6E-33 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6142 dccde064fa5751b8066faf3f063c19f6 283 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 55 278 8.2E-40 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_2631 077372f6773dfb29b39afe1d36cdb6e2 529 SMART SM00388 258 329 4.0E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2631 077372f6773dfb29b39afe1d36cdb6e2 529 Gene3D G3DSA:1.10.287.130 208 329 4.0E-24 T 14-10-2018 Amir_2631 077372f6773dfb29b39afe1d36cdb6e2 529 SUPERFAMILY SSF158472 204 254 4.71E-6 T 14-10-2018 Amir_2631 077372f6773dfb29b39afe1d36cdb6e2 529 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 328 4.0E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2631 077372f6773dfb29b39afe1d36cdb6e2 529 SMART SM00387 369 478 1.8E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2631 077372f6773dfb29b39afe1d36cdb6e2 529 Pfam PF00672 HAMP domain 204 253 9.4E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_2631 077372f6773dfb29b39afe1d36cdb6e2 529 SUPERFAMILY SSF55874 323 480 1.57E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2631 077372f6773dfb29b39afe1d36cdb6e2 529 SUPERFAMILY SSF47384 241 328 9.61E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_2631 077372f6773dfb29b39afe1d36cdb6e2 529 SMART SM00304 204 257 2.0E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_2631 077372f6773dfb29b39afe1d36cdb6e2 529 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 369 476 5.5E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2631 077372f6773dfb29b39afe1d36cdb6e2 529 Gene3D G3DSA:3.30.565.10 332 481 8.1E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2631 077372f6773dfb29b39afe1d36cdb6e2 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 456 4.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2631 077372f6773dfb29b39afe1d36cdb6e2 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 4.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2631 077372f6773dfb29b39afe1d36cdb6e2 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 475 4.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2631 077372f6773dfb29b39afe1d36cdb6e2 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 4.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 SMART SM00532 10 439 2.4E-126 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 SMART SM00292 587 671 0.0017 T 14-10-2018 IPR001357 BRCT domain Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 Gene3D G3DSA:3.40.50.10190 586 672 1.6E-17 T 14-10-2018 IPR036420 BRCT domain superfamily Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 PIRSF PIRSF001604 5 673 8.6E-190 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 Hamap MF_01588 DNA ligase [ligA]. 9 668 46.705 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 SUPERFAMILY SSF50249 308 386 4.28E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 313 386 4.1E-26 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 Gene3D G3DSA:1.10.150.20 496 575 1.5E-10 T 14-10-2018 Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 Pfam PF12826 Helix-hairpin-helix motif 513 556 7.9E-7 T 14-10-2018 Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 21 662 9.1E-164 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 SUPERFAMILY SSF56091 9 309 4.68E-70 T 14-10-2018 Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 Gene3D G3DSA:1.10.287.610 9 73 2.7E-8 T 14-10-2018 Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 113 142 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 Gene3D G3DSA:1.10.150.20 423 495 7.6E-20 T 14-10-2018 Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 SUPERFAMILY SSF47781 396 573 2.15E-40 T 14-10-2018 IPR010994 RuvA domain 2-like Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 SUPERFAMILY SSF52113 587 666 6.54E-8 T 14-10-2018 IPR036420 BRCT domain superfamily Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 11 309 1.1E-62 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 Gene3D G3DSA:3.30.470.90 75 309 2.2E-59 T 14-10-2018 Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 SMART SM00278 471 490 8.9 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 SMART SM00278 536 555 0.84 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amir_2964 bc4710b7d95c10bb8a226a14e20f40e5 674 Gene3D G3DSA:2.40.50.140 310 397 1.6E-27 T 14-10-2018 Amir_2987 d0bf549685b80f0a9cf64e3f7349b1e4 323 SMART SM00418 252 322 2.3E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_2987 d0bf549685b80f0a9cf64e3f7349b1e4 323 Pfam PF12840 Helix-turn-helix domain 256 305 1.7E-7 T 14-10-2018 Amir_2987 d0bf549685b80f0a9cf64e3f7349b1e4 323 Gene3D G3DSA:1.10.10.10 252 322 2.4E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2987 d0bf549685b80f0a9cf64e3f7349b1e4 323 SUPERFAMILY SSF46785 256 322 4.26E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2252 8cd10d174c8bf7da57de728415c2ef45 362 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 23 254 3.0E-59 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Amir_2252 8cd10d174c8bf7da57de728415c2ef45 362 ProSitePatterns PS01218 TatC family signature. 181 200 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site Amir_2252 8cd10d174c8bf7da57de728415c2ef45 362 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 6 266 15.344 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Amir_2252 8cd10d174c8bf7da57de728415c2ef45 362 Pfam PF00902 Sec-independent protein translocase protein (TatC) 25 248 7.6E-59 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Amir_2252 8cd10d174c8bf7da57de728415c2ef45 362 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 22 49 4.1E-35 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Amir_2252 8cd10d174c8bf7da57de728415c2ef45 362 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 181 209 4.1E-35 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Amir_2252 8cd10d174c8bf7da57de728415c2ef45 362 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 131 157 4.1E-35 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Amir_2252 8cd10d174c8bf7da57de728415c2ef45 362 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 113 131 4.1E-35 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Amir_4615 254593efd296cf9680116d7d85037dd2 392 Gene3D G3DSA:3.30.9.50 40 271 2.1E-57 T 14-10-2018 Amir_4615 254593efd296cf9680116d7d85037dd2 392 SUPERFAMILY SSF51905 4 367 3.0E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4615 254593efd296cf9680116d7d85037dd2 392 Gene3D G3DSA:3.50.50.60 7 340 2.1E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4615 254593efd296cf9680116d7d85037dd2 392 Pfam PF01494 FAD binding domain 115 166 6.0E-5 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_4615 254593efd296cf9680116d7d85037dd2 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 149 164 2.8E-12 T 14-10-2018 Amir_4615 254593efd296cf9680116d7d85037dd2 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 2.8E-12 T 14-10-2018 Amir_4615 254593efd296cf9680116d7d85037dd2 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.8E-12 T 14-10-2018 Amir_4615 254593efd296cf9680116d7d85037dd2 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.8E-12 T 14-10-2018 Amir_0210 372792f9c66bf052f8b6b206eb09ddee 380 ProSitePatterns PS00211 ABC transporters family signature. 171 185 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0210 372792f9c66bf052f8b6b206eb09ddee 380 SUPERFAMILY SSF52540 18 270 1.03E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0210 372792f9c66bf052f8b6b206eb09ddee 380 Gene3D G3DSA:3.40.50.300 16 352 1.7E-102 T 14-10-2018 Amir_0210 372792f9c66bf052f8b6b206eb09ddee 380 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 250 315 4.5E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_0210 372792f9c66bf052f8b6b206eb09ddee 380 SMART SM00382 55 248 1.4E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0210 372792f9c66bf052f8b6b206eb09ddee 380 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 249 337 4.3E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_0210 372792f9c66bf052f8b6b206eb09ddee 380 Pfam PF00005 ABC transporter 47 198 1.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5183 f1c78d805f56af4a03f24cb9eb1e119f 216 Gene3D G3DSA:1.10.10.10 131 209 5.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5183 f1c78d805f56af4a03f24cb9eb1e119f 216 Pfam PF08281 Sigma-70, region 4 151 203 4.0E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_5183 f1c78d805f56af4a03f24cb9eb1e119f 216 SUPERFAMILY SSF88946 38 135 5.1E-17 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5183 f1c78d805f56af4a03f24cb9eb1e119f 216 SUPERFAMILY SSF88659 134 208 1.18E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5183 f1c78d805f56af4a03f24cb9eb1e119f 216 Gene3D G3DSA:1.10.1740.10 34 119 5.5E-14 T 14-10-2018 Amir_5183 f1c78d805f56af4a03f24cb9eb1e119f 216 Pfam PF04542 Sigma-70 region 2 56 118 1.5E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5183 f1c78d805f56af4a03f24cb9eb1e119f 216 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 207 1.2E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_6544 214ad49f4724761e2c6a9333e2e1f58c 97 PRINTS PR00297 10kDa chaperonin signature 5 20 5.9E-31 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amir_6544 214ad49f4724761e2c6a9333e2e1f58c 97 PRINTS PR00297 10kDa chaperonin signature 62 74 5.9E-31 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amir_6544 214ad49f4724761e2c6a9333e2e1f58c 97 PRINTS PR00297 10kDa chaperonin signature 83 96 5.9E-31 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amir_6544 214ad49f4724761e2c6a9333e2e1f58c 97 PRINTS PR00297 10kDa chaperonin signature 27 48 5.9E-31 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amir_6544 214ad49f4724761e2c6a9333e2e1f58c 97 Pfam PF00166 Chaperonin 10 Kd subunit 4 96 3.2E-35 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amir_6544 214ad49f4724761e2c6a9333e2e1f58c 97 SUPERFAMILY SSF50129 3 97 1.32E-34 T 14-10-2018 IPR011032 GroES-like superfamily Amir_6544 214ad49f4724761e2c6a9333e2e1f58c 97 Gene3D G3DSA:2.30.33.40 2 97 9.4E-39 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Amir_6544 214ad49f4724761e2c6a9333e2e1f58c 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 5 29 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 Amir_6544 214ad49f4724761e2c6a9333e2e1f58c 97 Hamap MF_00580 10 kDa chaperonin [groS]. 4 97 25.784 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amir_6544 214ad49f4724761e2c6a9333e2e1f58c 97 SMART SM00883 4 96 3.6E-54 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 SUPERFAMILY SSF52540 8 284 6.91E-110 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 SUPERFAMILY SSF50447 267 406 3.26E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 Gene3D G3DSA:2.40.30.10 297 407 1.4E-40 T 14-10-2018 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 SMART SM00838 606 693 3.9E-56 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 Gene3D G3DSA:3.30.230.10 486 693 7.2E-88 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 Hamap MF_00054_B Elongation factor G [fusA]. 8 697 110.188 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 PRINTS PR00315 GTP-binding elongation factor signature 60 68 3.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 PRINTS PR00315 GTP-binding elongation factor signature 96 107 3.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 PRINTS PR00315 GTP-binding elongation factor signature 80 90 3.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 PRINTS PR00315 GTP-binding elongation factor signature 132 141 3.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 7 697 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 SMART SM00889 482 604 1.2E-70 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 Pfam PF00009 Elongation factor Tu GTP binding domain 11 284 1.2E-68 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 SUPERFAMILY SSF54980 406 483 1.29E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 182 4.3E-33 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 SUPERFAMILY SSF54980 609 695 4.8E-30 T 14-10-2018 IPR035647 EF-G domain III/V-like Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 Pfam PF14492 Elongation Factor G, domain II 406 480 1.7E-35 T 14-10-2018 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 Pfam PF03144 Elongation factor Tu domain 2 326 392 7.8E-12 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 Pfam PF00679 Elongation factor G C-terminus 607 692 2.9E-30 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 Gene3D G3DSA:3.30.70.870 408 485 8.9E-33 T 14-10-2018 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 Pfam PF03764 Elongation factor G, domain IV 481 604 1.4E-46 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 Gene3D G3DSA:3.30.70.240 610 680 7.2E-88 T 14-10-2018 Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 SUPERFAMILY SSF54211 481 605 2.3E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_6617 ba2bfa06b189a012d2914e5b5e6382e6 700 Gene3D G3DSA:3.40.50.300 5 296 1.1E-113 T 14-10-2018 Amir_1431 4a2e90e4e57a670120f03fa7de2767ca 948 Pfam PF02867 Ribonucleotide reductase, barrel domain 160 695 5.8E-140 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_1431 4a2e90e4e57a670120f03fa7de2767ca 948 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 56 139 1.1E-19 T 14-10-2018 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Amir_1431 4a2e90e4e57a670120f03fa7de2767ca 948 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 96 705 2.4E-181 T 14-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Amir_1431 4a2e90e4e57a670120f03fa7de2767ca 948 PRINTS PR01183 Ribonucleotide reductase large chain signature 541 568 5.1E-11 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_1431 4a2e90e4e57a670120f03fa7de2767ca 948 PRINTS PR01183 Ribonucleotide reductase large chain signature 235 254 5.1E-11 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_1431 4a2e90e4e57a670120f03fa7de2767ca 948 PRINTS PR01183 Ribonucleotide reductase large chain signature 362 373 5.1E-11 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_1431 4a2e90e4e57a670120f03fa7de2767ca 948 PRINTS PR01183 Ribonucleotide reductase large chain signature 434 456 5.1E-11 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_1431 4a2e90e4e57a670120f03fa7de2767ca 948 Gene3D G3DSA:3.20.70.20 65 711 7.6E-194 T 14-10-2018 Amir_1431 4a2e90e4e57a670120f03fa7de2767ca 948 SUPERFAMILY SSF51998 160 699 1.59E-129 T 14-10-2018 Amir_0481 7d3e20c5fb90e4b1b2676f36a15ed3db 131 SUPERFAMILY SSF50249 4 70 4.16E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_0481 7d3e20c5fb90e4b1b2676f36a15ed3db 131 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 7.1E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_0481 7d3e20c5fb90e4b1b2676f36a15ed3db 131 Gene3D G3DSA:2.40.50.140 5 66 2.8E-20 T 14-10-2018 Amir_0481 7d3e20c5fb90e4b1b2676f36a15ed3db 131 SMART SM00357 6 68 3.7E-21 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Amir_0481 7d3e20c5fb90e4b1b2676f36a15ed3db 131 PRINTS PR00050 Cold shock protein signature 27 36 6.5E-12 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_0481 7d3e20c5fb90e4b1b2676f36a15ed3db 131 PRINTS PR00050 Cold shock protein signature 41 59 6.5E-12 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_0481 7d3e20c5fb90e4b1b2676f36a15ed3db 131 PRINTS PR00050 Cold shock protein signature 7 22 6.5E-12 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_6555 af6511f68f07457f11926a3ab7d1110c 366 Pfam PF12697 Alpha/beta hydrolase family 84 341 2.6E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_6555 af6511f68f07457f11926a3ab7d1110c 366 Gene3D G3DSA:3.40.50.1820 53 357 2.1E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6555 af6511f68f07457f11926a3ab7d1110c 366 SUPERFAMILY SSF53474 54 348 1.34E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4371 ce44dcc5c5a6be2a81e26665ea1448f2 402 Pfam PF00108 Thiolase, N-terminal domain 5 270 3.2E-44 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Amir_4371 ce44dcc5c5a6be2a81e26665ea1448f2 402 ProSitePatterns PS00737 Thiolases signature 2. 348 364 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Amir_4371 ce44dcc5c5a6be2a81e26665ea1448f2 402 Gene3D G3DSA:3.40.47.10 6 299 6.4E-142 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4371 ce44dcc5c5a6be2a81e26665ea1448f2 402 PIRSF PIRSF000429 2 402 3.9E-110 T 14-10-2018 IPR002155 Thiolase GO:0016747 Amir_4371 ce44dcc5c5a6be2a81e26665ea1448f2 402 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 Amir_4371 ce44dcc5c5a6be2a81e26665ea1448f2 402 Gene3D G3DSA:3.40.47.10 125 397 6.4E-142 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4371 ce44dcc5c5a6be2a81e26665ea1448f2 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Amir_4371 ce44dcc5c5a6be2a81e26665ea1448f2 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 400 9.0E-129 T 14-10-2018 IPR002155 Thiolase GO:0016747 Amir_4371 ce44dcc5c5a6be2a81e26665ea1448f2 402 SUPERFAMILY SSF53901 280 401 8.64E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4371 ce44dcc5c5a6be2a81e26665ea1448f2 402 SUPERFAMILY SSF53901 2 276 4.26E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4371 ce44dcc5c5a6be2a81e26665ea1448f2 402 Pfam PF02803 Thiolase, C-terminal domain 280 401 1.2E-45 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Amir_5466 b4d5b0ead197979bfd0778971371c923 585 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 140 1.6E-8 T 14-10-2018 Amir_5466 b4d5b0ead197979bfd0778971371c923 585 PRINTS PR00775 90kDa heat shock protein signature 1 21 4.8E-12 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amir_5466 b4d5b0ead197979bfd0778971371c923 585 PRINTS PR00775 90kDa heat shock protein signature 22 44 4.8E-12 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amir_5466 b4d5b0ead197979bfd0778971371c923 585 PRINTS PR00775 90kDa heat shock protein signature 104 126 4.8E-12 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amir_5466 b4d5b0ead197979bfd0778971371c923 585 PIRSF PIRSF002583 207 585 2.7E-35 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Amir_5466 b4d5b0ead197979bfd0778971371c923 585 PIRSF PIRSF002583 1 206 3.7E-53 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Amir_5466 b4d5b0ead197979bfd0778971371c923 585 SUPERFAMILY SSF55874 3 197 1.57E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5466 b4d5b0ead197979bfd0778971371c923 585 SUPERFAMILY SSF54211 222 420 3.11E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_5466 b4d5b0ead197979bfd0778971371c923 585 Gene3D G3DSA:3.30.230.80 244 353 2.6E-11 T 14-10-2018 Amir_5466 b4d5b0ead197979bfd0778971371c923 585 Gene3D G3DSA:3.30.565.10 1 203 2.3E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5466 b4d5b0ead197979bfd0778971371c923 585 Pfam PF00183 Hsp90 protein 254 366 1.6E-9 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Amir_4825 ad22e2cc30f5b4832ab91685ab7800fe 446 Pfam PF00202 Aminotransferase class-III 35 437 2.0E-88 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_4825 ad22e2cc30f5b4832ab91685ab7800fe 446 Gene3D G3DSA:3.40.640.10 68 332 6.6E-141 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_4825 ad22e2cc30f5b4832ab91685ab7800fe 446 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 248 285 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_4825 ad22e2cc30f5b4832ab91685ab7800fe 446 PIRSF PIRSF000521 12 144 9.0E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_4825 ad22e2cc30f5b4832ab91685ab7800fe 446 PIRSF PIRSF000521 130 440 1.1E-28 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_4825 ad22e2cc30f5b4832ab91685ab7800fe 446 Gene3D G3DSA:3.90.1150.10 39 432 6.6E-141 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_4825 ad22e2cc30f5b4832ab91685ab7800fe 446 SUPERFAMILY SSF53383 15 439 5.19E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_6112 12465692540d593b53806cafb92749e8 246 SUPERFAMILY SSF53062 1 113 2.22E-26 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Amir_6112 12465692540d593b53806cafb92749e8 246 PRINTS PR00107 Phosphocarrier protein signature 197 212 6.0E-10 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like Amir_6112 12465692540d593b53806cafb92749e8 246 PRINTS PR00107 Phosphocarrier protein signature 212 229 6.0E-10 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like Amir_6112 12465692540d593b53806cafb92749e8 246 PRINTS PR00107 Phosphocarrier protein signature 172 188 6.0E-10 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like Amir_6112 12465692540d593b53806cafb92749e8 246 Pfam PF00381 PTS HPr component phosphorylation site 165 240 6.9E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like Amir_6112 12465692540d593b53806cafb92749e8 246 Pfam PF03610 PTS system fructose IIA component 1 108 3.7E-19 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 Amir_6112 12465692540d593b53806cafb92749e8 246 SUPERFAMILY SSF55594 164 245 3.4E-20 T 14-10-2018 IPR035895 HPr-like superfamily Amir_6112 12465692540d593b53806cafb92749e8 246 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 165 239 1.9E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like Amir_6112 12465692540d593b53806cafb92749e8 246 Gene3D G3DSA:3.30.1340.10 160 241 2.7E-20 T 14-10-2018 IPR035895 HPr-like superfamily Amir_6112 12465692540d593b53806cafb92749e8 246 Gene3D G3DSA:3.40.50.510 1 118 9.3E-34 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Amir_1014 bdd81bf36b6a181eab6414f8c7717131 211 Gene3D G3DSA:1.20.1540.10 20 207 5.0E-14 T 14-10-2018 IPR035952 Rhomboid-like superfamily Amir_1014 bdd81bf36b6a181eab6414f8c7717131 211 Pfam PF01694 Rhomboid family 63 198 3.0E-22 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Amir_1014 bdd81bf36b6a181eab6414f8c7717131 211 SUPERFAMILY SSF144091 29 197 6.41E-27 T 14-10-2018 Amir_2300 fa6230ea72775931e9cf954eddd5d731 334 SUPERFAMILY SSF51658 8 318 2.23E-58 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Amir_2300 fa6230ea72775931e9cf954eddd5d731 334 Gene3D G3DSA:3.20.20.150 2 323 2.6E-99 T 14-10-2018 Amir_2300 fa6230ea72775931e9cf954eddd5d731 334 Pfam PF07582 AP endonuclease family 2 C terminus 275 329 2.6E-24 T 14-10-2018 IPR011418 AP endonuclease, family 2, C-terminal Amir_2300 fa6230ea72775931e9cf954eddd5d731 334 Pfam PF01261 Xylose isomerase-like TIM barrel 22 273 6.2E-36 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Amir_0632 5230b659519a85a163c36153bc70a623 236 Gene3D G3DSA:1.10.10.10 139 197 2.5E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0632 5230b659519a85a163c36153bc70a623 236 SUPERFAMILY SSF46785 139 206 1.34E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0632 5230b659519a85a163c36153bc70a623 236 SUPERFAMILY SSF51206 9 131 2.62E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Amir_0632 5230b659519a85a163c36153bc70a623 236 Pfam PF00027 Cyclic nucleotide-binding domain 23 111 8.0E-16 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_0632 5230b659519a85a163c36153bc70a623 236 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 73 90 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site Amir_0632 5230b659519a85a163c36153bc70a623 236 SMART SM00100 4 126 1.7E-8 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_0632 5230b659519a85a163c36153bc70a623 236 Gene3D G3DSA:2.60.120.10 2 135 1.1E-24 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_3544 ee851a29d095ca0ac35b78d1f5a6329e 543 SUPERFAMILY SSF48452 423 531 4.64E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3544 ee851a29d095ca0ac35b78d1f5a6329e 543 Gene3D G3DSA:3.40.50.300 73 141 2.8E-7 T 14-10-2018 Amir_3544 ee851a29d095ca0ac35b78d1f5a6329e 543 Gene3D G3DSA:1.25.40.10 434 541 1.6E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3544 ee851a29d095ca0ac35b78d1f5a6329e 543 PRINTS PR00364 Disease resistance protein signature 98 113 1.5E-5 T 14-10-2018 Amir_3544 ee851a29d095ca0ac35b78d1f5a6329e 543 PRINTS PR00364 Disease resistance protein signature 223 237 1.5E-5 T 14-10-2018 Amir_3544 ee851a29d095ca0ac35b78d1f5a6329e 543 SUPERFAMILY SSF52540 77 239 1.27E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6765 e4b731d215fb80db5d9d04813cd127f7 291 Gene3D G3DSA:3.30.70.260 3 90 6.7E-23 T 14-10-2018 Amir_6765 e4b731d215fb80db5d9d04813cd127f7 291 PIRSF PIRSF036480 5 291 1.3E-108 T 14-10-2018 Amir_6765 e4b731d215fb80db5d9d04813cd127f7 291 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 265 290 4.1E-56 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Amir_6765 e4b731d215fb80db5d9d04813cd127f7 291 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 243 265 4.1E-56 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Amir_6765 e4b731d215fb80db5d9d04813cd127f7 291 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 94 116 4.1E-56 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Amir_6765 e4b731d215fb80db5d9d04813cd127f7 291 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 42 54 4.1E-56 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Amir_6765 e4b731d215fb80db5d9d04813cd127f7 291 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 10 36 4.1E-56 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Amir_6765 e4b731d215fb80db5d9d04813cd127f7 291 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 116 143 4.1E-56 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Amir_6765 e4b731d215fb80db5d9d04813cd127f7 291 SUPERFAMILY SSF53328 94 291 3.14E-57 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amir_6765 e4b731d215fb80db5d9d04813cd127f7 291 Pfam PF00551 Formyl transferase 94 271 8.5E-39 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amir_6765 e4b731d215fb80db5d9d04813cd127f7 291 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 5 291 46.987 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Amir_6765 e4b731d215fb80db5d9d04813cd127f7 291 Gene3D G3DSA:3.40.50.170 92 291 1.5E-68 T 14-10-2018 Amir_6765 e4b731d215fb80db5d9d04813cd127f7 291 SUPERFAMILY SSF55021 7 88 1.71E-14 T 14-10-2018 Amir_6765 e4b731d215fb80db5d9d04813cd127f7 291 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 11 291 1.2E-98 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Amir_6948 0a51649cb7c561e3729c1ca26e3c1458 217 SUPERFAMILY SSF51064 146 200 1.7E-16 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Amir_6948 0a51649cb7c561e3729c1ca26e3c1458 217 Pfam PF01025 GrpE 62 199 3.8E-33 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Amir_6948 0a51649cb7c561e3729c1ca26e3c1458 217 PRINTS PR00773 GrpE protein signature 179 198 4.6E-24 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Amir_6948 0a51649cb7c561e3729c1ca26e3c1458 217 PRINTS PR00773 GrpE protein signature 77 93 4.6E-24 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Amir_6948 0a51649cb7c561e3729c1ca26e3c1458 217 PRINTS PR00773 GrpE protein signature 105 120 4.6E-24 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Amir_6948 0a51649cb7c561e3729c1ca26e3c1458 217 PRINTS PR00773 GrpE protein signature 152 167 4.6E-24 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Amir_6948 0a51649cb7c561e3729c1ca26e3c1458 217 ProSitePatterns PS01071 grpE protein signature. 155 198 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Amir_6948 0a51649cb7c561e3729c1ca26e3c1458 217 Gene3D G3DSA:3.90.20.20 46 143 6.1E-16 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Amir_6948 0a51649cb7c561e3729c1ca26e3c1458 217 Hamap MF_01151 Protein GrpE [grpE]. 5 200 17.083 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Amir_6948 0a51649cb7c561e3729c1ca26e3c1458 217 Gene3D G3DSA:2.30.22.10 144 207 2.2E-19 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Amir_6948 0a51649cb7c561e3729c1ca26e3c1458 217 SUPERFAMILY SSF58014 62 143 1.18E-16 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Amir_3697 52c2ed0ae639585016a1bd8104a67e00 313 Gene3D G3DSA:3.30.565.10 189 309 2.2E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3697 52c2ed0ae639585016a1bd8104a67e00 313 Pfam PF07730 Histidine kinase 119 182 5.1E-8 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_3697 52c2ed0ae639585016a1bd8104a67e00 313 SUPERFAMILY SSF55874 199 298 4.07E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2662 bc70483bd72ce3411017088a0b2b7363 542 Gene3D G3DSA:2.20.28.20 141 174 1.5E-93 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amir_2662 bc70483bd72ce3411017088a0b2b7363 542 SUPERFAMILY SSF52374 6 385 1.97E-49 T 14-10-2018 Amir_2662 bc70483bd72ce3411017088a0b2b7363 542 Pfam PF09334 tRNA synthetases class I (M) 8 397 6.3E-63 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_2662 bc70483bd72ce3411017088a0b2b7363 542 Gene3D G3DSA:3.40.50.620 8 384 1.5E-93 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 Gene3D G3DSA:3.30.70.250 654 719 3.3E-43 T 14-10-2018 Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 289 2.0E-62 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 Pfam PF14765 Polyketide synthase dehydratase 993 1208 1.2E-17 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 SUPERFAMILY SSF55048 656 717 4.84E-7 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 SUPERFAMILY SSF56214 1343 1424 2.62E-14 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 297 415 3.3E-34 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 Gene3D G3DSA:3.10.129.110 967 1209 1.4E-17 T 14-10-2018 Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 557 831 4.4E-13 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 Gene3D G3DSA:3.40.47.10 4 517 7.1E-153 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 SUPERFAMILY SSF53901 5 461 5.17E-74 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 Gene3D G3DSA:3.90.470.20 1234 1342 1.7E-8 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 SMART SM00825 Beta-ketoacyl synthase 7 465 1.5E-97 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 Gene3D G3DSA:3.40.366.10 596 802 3.3E-43 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 SUPERFAMILY SSF56214 1246 1339 6.67E-9 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 Gene3D G3DSA:3.90.470.20 1344 1438 1.3E-12 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 SUPERFAMILY SSF54637 1134 1203 5.41E-5 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 202 218 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 Pfam PF00698 Acyl transferase domain 604 798 1.7E-16 T 14-10-2018 IPR014043 Acyl transferase Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 420 497 2.1E-8 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 1344 1420 9.4E-12 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Amir_2494 d9bd21f6f13d7c878e4e0505b7d0830e 1453 SUPERFAMILY SSF52151 553 819 9.42E-29 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_1714 64d47ee6a370f8c354a9642eefbdfe49 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 117 1.5E-24 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_1714 64d47ee6a370f8c354a9642eefbdfe49 386 Gene3D G3DSA:2.40.110.10 121 233 6.5E-28 T 14-10-2018 Amir_1714 64d47ee6a370f8c354a9642eefbdfe49 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 378 8.6E-30 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_1714 64d47ee6a370f8c354a9642eefbdfe49 386 Gene3D G3DSA:1.20.140.10 234 382 6.4E-34 T 14-10-2018 Amir_1714 64d47ee6a370f8c354a9642eefbdfe49 386 SUPERFAMILY SSF47203 228 384 4.03E-38 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_1714 64d47ee6a370f8c354a9642eefbdfe49 386 Gene3D G3DSA:1.10.540.10 2 118 2.5E-26 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_1714 64d47ee6a370f8c354a9642eefbdfe49 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 200 3.1E-18 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amir_1714 64d47ee6a370f8c354a9642eefbdfe49 386 SUPERFAMILY SSF56645 4 242 6.28E-58 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_3308 83e419cab807c989ff94e853b349a589 1005 PRINTS PR00364 Disease resistance protein signature 445 459 4.4E-7 T 14-10-2018 Amir_3308 83e419cab807c989ff94e853b349a589 1005 PRINTS PR00364 Disease resistance protein signature 339 353 4.4E-7 T 14-10-2018 Amir_3308 83e419cab807c989ff94e853b349a589 1005 PRINTS PR00364 Disease resistance protein signature 272 287 4.4E-7 T 14-10-2018 Amir_3308 83e419cab807c989ff94e853b349a589 1005 SUPERFAMILY SSF48452 97 250 2.22E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3308 83e419cab807c989ff94e853b349a589 1005 Pfam PF03704 Bacterial transcriptional activator domain 99 233 1.1E-22 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_3308 83e419cab807c989ff94e853b349a589 1005 SUPERFAMILY SSF46894 8 83 5.95E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_3308 83e419cab807c989ff94e853b349a589 1005 Gene3D G3DSA:1.25.40.10 97 251 1.6E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3308 83e419cab807c989ff94e853b349a589 1005 SMART SM01043 98 233 1.5E-26 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_3308 83e419cab807c989ff94e853b349a589 1005 SUPERFAMILY SSF52540 239 508 8.89E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3308 83e419cab807c989ff94e853b349a589 1005 Gene3D G3DSA:1.25.40.10 711 988 4.2E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3308 83e419cab807c989ff94e853b349a589 1005 Gene3D G3DSA:1.10.10.10 2 96 4.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3308 83e419cab807c989ff94e853b349a589 1005 Pfam PF00486 Transcriptional regulatory protein, C terminal 30 81 2.3E-4 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_3308 83e419cab807c989ff94e853b349a589 1005 SMART SM00862 21 94 0.0053 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_6642 3508d5f7795a7d1280b6a82ea1a31a87 136 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 83 111 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amir_6642 3508d5f7795a7d1280b6a82ea1a31a87 136 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 82 134 1.2E-18 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amir_6642 3508d5f7795a7d1280b6a82ea1a31a87 136 Gene3D G3DSA:1.20.5.1030 76 133 2.6E-17 T 14-10-2018 IPR038379 SecE superfamily Amir_6642 3508d5f7795a7d1280b6a82ea1a31a87 136 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 80 136 3.4E-19 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Amir_6642 3508d5f7795a7d1280b6a82ea1a31a87 136 Hamap MF_00422 Protein translocase subunit SecE [secE]. 78 133 13.019 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amir_4236 4ac6c5f61727289a4ba0789fee448caa 535 SMART SM00487 19 214 2.7E-26 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_4236 4ac6c5f61727289a4ba0789fee448caa 535 Gene3D G3DSA:3.40.50.300 3 204 5.4E-69 T 14-10-2018 Amir_4236 4ac6c5f61727289a4ba0789fee448caa 535 SUPERFAMILY SSF52540 63 343 1.25E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4236 4ac6c5f61727289a4ba0789fee448caa 535 SMART SM00490 248 324 1.3E-21 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_4236 4ac6c5f61727289a4ba0789fee448caa 535 Pfam PF00271 Helicase conserved C-terminal domain 235 323 1.0E-13 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_4236 4ac6c5f61727289a4ba0789fee448caa 535 Pfam PF00270 DEAD/DEAH box helicase 25 184 4.6E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amir_4236 4ac6c5f61727289a4ba0789fee448caa 535 Pfam PF16124 RecQ zinc-binding 418 466 3.4E-9 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Amir_4236 4ac6c5f61727289a4ba0789fee448caa 535 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 343 1.8E-103 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Amir_4236 4ac6c5f61727289a4ba0789fee448caa 535 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 137 146 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site Amir_7074 136be74e66574086424e06f7dcb65bc3 934 Gene3D G3DSA:1.10.730.10 728 874 1.7E-199 T 14-10-2018 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 PRINTS PR00985 Leucyl-tRNA synthetase signature 282 301 8.6E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 PRINTS PR00985 Leucyl-tRNA synthetase signature 622 644 8.6E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 PRINTS PR00985 Leucyl-tRNA synthetase signature 147 164 8.6E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 PRINTS PR00985 Leucyl-tRNA synthetase signature 655 665 8.6E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 PRINTS PR00985 Leucyl-tRNA synthetase signature 570 588 8.6E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 PRINTS PR00985 Leucyl-tRNA synthetase signature 220 236 8.6E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 PRINTS PR00985 Leucyl-tRNA synthetase signature 253 266 8.6E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 16 934 21.292 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 SUPERFAMILY SSF52374 21 752 2.21E-107 T 14-10-2018 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 Gene3D G3DSA:3.40.50.620 209 683 1.7E-199 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_7074 136be74e66574086424e06f7dcb65bc3 934 SUPERFAMILY SSF50677 293 485 1.03E-48 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 Gene3D G3DSA:3.40.50.620 51 169 8.3E-42 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_7074 136be74e66574086424e06f7dcb65bc3 934 SUPERFAMILY SSF47323 748 933 4.67E-26 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 Gene3D G3DSA:3.10.330.110 684 727 1.7E-199 T 14-10-2018 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 212 934 1.2E-218 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 Pfam PF09334 tRNA synthetases class I (M) 59 165 1.7E-12 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 63 73 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 Pfam PF08264 Anticodon-binding domain of tRNA 782 899 5.9E-11 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 288 474 1.9E-61 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 Gene3D G3DSA:3.10.20.590 875 934 2.2E-16 T 14-10-2018 Amir_7074 136be74e66574086424e06f7dcb65bc3 934 Gene3D G3DSA:3.90.740.10 302 498 1.7E-199 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Amir_2409 4026122c1b62861e6166a7854f3edb5c 221 Pfam PF00072 Response regulator receiver domain 8 119 2.2E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2409 4026122c1b62861e6166a7854f3edb5c 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2409 4026122c1b62861e6166a7854f3edb5c 221 SMART SM00448 6 119 7.9E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2409 4026122c1b62861e6166a7854f3edb5c 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 7.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2409 4026122c1b62861e6166a7854f3edb5c 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 7.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2409 4026122c1b62861e6166a7854f3edb5c 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 7.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2409 4026122c1b62861e6166a7854f3edb5c 221 Gene3D G3DSA:3.40.50.12740 6 213 7.0E-61 T 14-10-2018 Amir_2409 4026122c1b62861e6166a7854f3edb5c 221 SUPERFAMILY SSF46894 145 213 1.77E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_2409 4026122c1b62861e6166a7854f3edb5c 221 SMART SM00421 151 208 2.4E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2409 4026122c1b62861e6166a7854f3edb5c 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 208 7.7E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2409 4026122c1b62861e6166a7854f3edb5c 221 SUPERFAMILY SSF52172 5 135 1.85E-30 T 14-10-2018 IPR011006 CheY-like superfamily Amir_5363 7006442a5b2eec3ddf3aaa29c10533df 268 SUPERFAMILY SSF88659 122 196 1.61E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5363 7006442a5b2eec3ddf3aaa29c10533df 268 Gene3D G3DSA:1.20.120.1810 8 117 1.5E-16 T 14-10-2018 Amir_5363 7006442a5b2eec3ddf3aaa29c10533df 268 SUPERFAMILY SSF88946 28 118 3.14E-28 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5363 7006442a5b2eec3ddf3aaa29c10533df 268 PRINTS PR00046 Major sigma-70 factor signature 236 251 9.1E-10 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_5363 7006442a5b2eec3ddf3aaa29c10533df 268 PRINTS PR00046 Major sigma-70 factor signature 73 86 9.1E-10 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_5363 7006442a5b2eec3ddf3aaa29c10533df 268 PRINTS PR00046 Major sigma-70 factor signature 251 262 9.1E-10 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_5363 7006442a5b2eec3ddf3aaa29c10533df 268 PRINTS PR00046 Major sigma-70 factor signature 219 231 9.1E-10 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_5363 7006442a5b2eec3ddf3aaa29c10533df 268 SUPERFAMILY SSF88659 186 267 2.8E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5363 7006442a5b2eec3ddf3aaa29c10533df 268 Pfam PF04539 Sigma-70 region 3 133 188 1.0E-12 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Amir_5363 7006442a5b2eec3ddf3aaa29c10533df 268 Gene3D G3DSA:1.10.10.10 119 171 4.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5363 7006442a5b2eec3ddf3aaa29c10533df 268 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 45 264 3.1E-38 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_5363 7006442a5b2eec3ddf3aaa29c10533df 268 Gene3D G3DSA:1.10.10.10 195 268 1.1E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5363 7006442a5b2eec3ddf3aaa29c10533df 268 Pfam PF04545 Sigma-70, region 4 215 264 5.3E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amir_5363 7006442a5b2eec3ddf3aaa29c10533df 268 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 43 266 6.8E-91 T 14-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_5363 7006442a5b2eec3ddf3aaa29c10533df 268 Pfam PF04542 Sigma-70 region 2 49 118 3.3E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6229 216f42a80195d4330770baf84a794816 643 Pfam PF00364 Biotin-requiring enzyme 573 636 4.7E-14 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Amir_6229 216f42a80195d4330770baf84a794816 643 SMART SM00878 337 441 2.4E-54 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_6229 216f42a80195d4330770baf84a794816 643 Pfam PF02785 Biotin carboxylase C-terminal domain 337 441 6.5E-34 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_6229 216f42a80195d4330770baf84a794816 643 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 325 5.0E-79 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_6229 216f42a80195d4330770baf84a794816 643 SUPERFAMILY SSF51230 565 637 3.66E-19 T 14-10-2018 IPR011053 Single hybrid motif Amir_6229 216f42a80195d4330770baf84a794816 643 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_6229 216f42a80195d4330770baf84a794816 643 Gene3D G3DSA:2.40.50.100 571 638 2.6E-19 T 14-10-2018 Amir_6229 216f42a80195d4330770baf84a794816 643 SUPERFAMILY SSF56059 85 341 2.83E-68 T 14-10-2018 Amir_6229 216f42a80195d4330770baf84a794816 643 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 112 2.8E-42 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_6229 216f42a80195d4330770baf84a794816 643 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 595 612 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_6229 216f42a80195d4330770baf84a794816 643 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 155 169 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_6229 216f42a80195d4330770baf84a794816 643 SUPERFAMILY SSF52440 2 115 1.29E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amir_6229 216f42a80195d4330770baf84a794816 643 SUPERFAMILY SSF51246 332 446 1.05E-36 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Amir_6229 216f42a80195d4330770baf84a794816 643 Gene3D G3DSA:3.30.470.130 1 447 2.9E-190 T 14-10-2018 Amir_1847 168d161f56444aff3e654db52b6bc2a1 382 Pfam PF13378 Enolase C-terminal domain-like 151 372 1.2E-47 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Amir_1847 168d161f56444aff3e654db52b6bc2a1 382 Gene3D G3DSA:3.20.20.120 116 378 6.4E-83 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_1847 168d161f56444aff3e654db52b6bc2a1 382 Gene3D G3DSA:3.30.390.10 1 115 2.8E-22 T 14-10-2018 IPR029017 Enolase-like, N-terminal Amir_1847 168d161f56444aff3e654db52b6bc2a1 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 55 123 8.5E-8 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Amir_1847 168d161f56444aff3e654db52b6bc2a1 382 SUPERFAMILY SSF54826 2 124 1.08E-22 T 14-10-2018 Amir_1847 168d161f56444aff3e654db52b6bc2a1 382 SUPERFAMILY SSF51604 111 379 2.36E-59 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_1847 168d161f56444aff3e654db52b6bc2a1 382 SMART SM00922 148 251 1.9E-20 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Amir_6734 9d67992e2ea47c850d79980a10398b1c 78 SUPERFAMILY SSF52833 3 77 4.16E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_6734 9d67992e2ea47c850d79980a10398b1c 78 Gene3D G3DSA:3.40.30.10 1 78 4.6E-23 T 14-10-2018 Amir_6734 9d67992e2ea47c850d79980a10398b1c 78 Pfam PF05768 Glutaredoxin-like domain (DUF836) 5 77 2.2E-16 T 14-10-2018 IPR008554 Glutaredoxin-like Amir_0634 2e993c2f71140946896352783c02de52 1001 SUPERFAMILY SSF52540 467 982 4.61E-115 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0634 2e993c2f71140946896352783c02de52 1001 Pfam PF13245 AAA domain 476 686 2.5E-45 T 14-10-2018 Amir_0634 2e993c2f71140946896352783c02de52 1001 Gene3D G3DSA:3.20.20.140 4 250 7.1E-12 T 14-10-2018 Amir_0634 2e993c2f71140946896352783c02de52 1001 Gene3D G3DSA:3.40.50.300 597 727 1.7E-38 T 14-10-2018 Amir_0634 2e993c2f71140946896352783c02de52 1001 Gene3D G3DSA:3.40.50.300 887 974 2.6E-26 T 14-10-2018 Amir_0634 2e993c2f71140946896352783c02de52 1001 Pfam PF13361 UvrD-like helicase C-terminal domain 707 844 1.8E-6 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Amir_0634 2e993c2f71140946896352783c02de52 1001 Gene3D G3DSA:3.40.50.300 754 859 9.1E-10 T 14-10-2018 Amir_0634 2e993c2f71140946896352783c02de52 1001 SUPERFAMILY SSF89550 4 250 5.49E-18 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Amir_0634 2e993c2f71140946896352783c02de52 1001 Gene3D G3DSA:3.40.50.300 472 572 1.6E-37 T 14-10-2018 Amir_0634 2e993c2f71140946896352783c02de52 1001 Gene3D G3DSA:1.10.10.160 573 588 1.6E-37 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily Amir_0634 2e993c2f71140946896352783c02de52 1001 Pfam PF13361 UvrD-like helicase C-terminal domain 898 965 1.1E-19 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Amir_3371 bf792b02f44b7e8d838dae19621e5878 141 SUPERFAMILY SSF55811 4 122 8.67E-16 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_3371 bf792b02f44b7e8d838dae19621e5878 141 Gene3D G3DSA:3.90.79.10 2 139 2.7E-14 T 14-10-2018 Amir_3371 bf792b02f44b7e8d838dae19621e5878 141 Pfam PF00293 NUDIX domain 9 136 1.4E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_3371 bf792b02f44b7e8d838dae19621e5878 141 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 423 2.9E-200 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 SMART SM01192 139 425 6.6E-209 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 SUPERFAMILY SSF51604 140 421 3.25E-122 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 ProSitePatterns PS00164 Enolase signature. 334 347 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 Hamap MF_00318 Enolase [eno]. 2 411 43.376 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 SUPERFAMILY SSF54826 4 137 1.79E-52 T 14-10-2018 Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 Gene3D G3DSA:3.20.20.120 129 425 1.4E-127 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 Pfam PF03952 Enolase, N-terminal domain 4 134 3.3E-56 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 Gene3D G3DSA:3.30.390.10 1 126 9.0E-52 T 14-10-2018 IPR029017 Enolase-like, N-terminal Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 SMART SM01193 4 134 6.4E-86 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 PRINTS PR00148 Enolase signature 311 322 5.4E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 PRINTS PR00148 Enolase signature 363 380 5.4E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 PRINTS PR00148 Enolase signature 37 51 5.4E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 PRINTS PR00148 Enolase signature 161 174 5.4E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 PRINTS PR00148 Enolase signature 107 123 5.4E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 PRINTS PR00148 Enolase signature 334 348 5.4E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 PIRSF PIRSF001400 1 424 1.7E-183 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_2739 48cc90883ebf94abe8bd8a2b3e179069 426 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 422 2.1E-125 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_0629 fd725654f2111775ef3b76e23c4f27ec 407 Gene3D G3DSA:3.40.980.10 173 316 3.5E-89 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amir_0629 fd725654f2111775ef3b76e23c4f27ec 407 Pfam PF03454 MoeA C-terminal region (domain IV) 331 402 3.5E-21 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0629 fd725654f2111775ef3b76e23c4f27ec 407 Gene3D G3DSA:2.40.340.10 328 400 4.1E-22 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0629 fd725654f2111775ef3b76e23c4f27ec 407 Pfam PF00994 Probable molybdopterin binding domain 179 316 1.6E-16 T 14-10-2018 IPR001453 MoaB/Mog domain Amir_0629 fd725654f2111775ef3b76e23c4f27ec 407 SUPERFAMILY SSF53218 175 322 1.1E-30 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amir_0629 fd725654f2111775ef3b76e23c4f27ec 407 SUPERFAMILY SSF63882 1 174 2.22E-45 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0629 fd725654f2111775ef3b76e23c4f27ec 407 Gene3D G3DSA:3.90.105.10 22 172 3.5E-89 T 14-10-2018 Amir_0629 fd725654f2111775ef3b76e23c4f27ec 407 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 165 4.0E-40 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0629 fd725654f2111775ef3b76e23c4f27ec 407 Gene3D G3DSA:2.170.190.11 44 139 3.5E-89 T 14-10-2018 Amir_0629 fd725654f2111775ef3b76e23c4f27ec 407 SUPERFAMILY SSF63867 326 402 2.75E-18 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0629 fd725654f2111775ef3b76e23c4f27ec 407 SMART SM00852 178 317 4.1E-24 T 14-10-2018 IPR001453 MoaB/Mog domain Amir_2696 228406160d605488d79b9fa96db4fe9b 931 ProSitePatterns PS00622 LuxR-type HTH domain signature. 866 893 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2696 228406160d605488d79b9fa96db4fe9b 931 Gene3D G3DSA:1.10.10.10 829 904 1.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2696 228406160d605488d79b9fa96db4fe9b 931 SUPERFAMILY SSF48452 587 721 1.78E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2696 228406160d605488d79b9fa96db4fe9b 931 Pfam PF00196 Bacterial regulatory proteins, luxR family 851 902 1.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2696 228406160d605488d79b9fa96db4fe9b 931 SMART SM00421 849 906 4.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2696 228406160d605488d79b9fa96db4fe9b 931 Pfam PF13191 AAA ATPase domain 3 156 3.5E-15 T 14-10-2018 Amir_2696 228406160d605488d79b9fa96db4fe9b 931 Gene3D G3DSA:3.40.50.300 1 167 2.6E-7 T 14-10-2018 Amir_2696 228406160d605488d79b9fa96db4fe9b 931 Gene3D G3DSA:1.25.40.10 515 823 5.2E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2696 228406160d605488d79b9fa96db4fe9b 931 SUPERFAMILY SSF46894 840 902 2.79E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_2696 228406160d605488d79b9fa96db4fe9b 931 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 852 866 7.7E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2696 228406160d605488d79b9fa96db4fe9b 931 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 866 882 7.7E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2696 228406160d605488d79b9fa96db4fe9b 931 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 882 894 7.7E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2696 228406160d605488d79b9fa96db4fe9b 931 SUPERFAMILY SSF52540 7 246 1.35E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6668 6feef2f4d23bd50497a9fab662c69066 333 SUPERFAMILY SSF48576 21 332 3.52E-80 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_6668 6feef2f4d23bd50497a9fab662c69066 333 Gene3D G3DSA:1.10.600.10 5 333 2.3E-103 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_6668 6feef2f4d23bd50497a9fab662c69066 333 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Amir_6668 6feef2f4d23bd50497a9fab662c69066 333 Pfam PF00348 Polyprenyl synthetase 46 284 3.3E-59 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Amir_0044 95583474029bebaabc4eebe8b0aabe79 610 ProSitePatterns PS01303 BCCT family of transporters signature. 335 344 - T 14-10-2018 IPR018093 BCCT transporter, conserved site Amir_0044 95583474029bebaabc4eebe8b0aabe79 610 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 28 516 3.9E-175 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Amir_0044 95583474029bebaabc4eebe8b0aabe79 610 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 66 517 5.2E-160 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Amir_4185 f1af991e40bae7822d26915b98f5f07a 518 Gene3D G3DSA:3.60.110.10 245 477 9.6E-18 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amir_4185 f1af991e40bae7822d26915b98f5f07a 518 Pfam PF00795 Carbon-nitrogen hydrolase 288 469 7.5E-18 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Amir_4185 f1af991e40bae7822d26915b98f5f07a 518 SUPERFAMILY SSF56317 223 478 2.49E-37 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amir_4185 f1af991e40bae7822d26915b98f5f07a 518 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 20 486 15.739 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Amir_4185 f1af991e40bae7822d26915b98f5f07a 518 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 72 448 1.1E-72 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Amir_2465 426aa6bee3050ed8913f128f2c02a09c 597 SMART SM00388 364 428 3.0E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2465 426aa6bee3050ed8913f128f2c02a09c 597 SUPERFAMILY SSF55785 213 342 2.62E-9 T 14-10-2018 IPR035965 PAS domain superfamily Amir_2465 426aa6bee3050ed8913f128f2c02a09c 597 Pfam PF13188 PAS domain 227 289 2.2E-5 T 14-10-2018 IPR000014 PAS domain Amir_2465 426aa6bee3050ed8913f128f2c02a09c 597 SUPERFAMILY SSF47384 347 428 4.32E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_2465 426aa6bee3050ed8913f128f2c02a09c 597 Pfam PF00512 His Kinase A (phospho-acceptor) domain 365 427 8.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2465 426aa6bee3050ed8913f128f2c02a09c 597 SMART SM00387 474 586 2.4E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2465 426aa6bee3050ed8913f128f2c02a09c 597 Gene3D G3DSA:3.30.565.10 434 586 4.3E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2465 426aa6bee3050ed8913f128f2c02a09c 597 SUPERFAMILY SSF55785 104 215 2.66E-5 T 14-10-2018 IPR035965 PAS domain superfamily Amir_2465 426aa6bee3050ed8913f128f2c02a09c 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 583 5.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2465 426aa6bee3050ed8913f128f2c02a09c 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 564 5.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2465 426aa6bee3050ed8913f128f2c02a09c 597 Gene3D G3DSA:3.30.450.20 95 213 1.2E-5 T 14-10-2018 Amir_2465 426aa6bee3050ed8913f128f2c02a09c 597 Gene3D G3DSA:1.10.287.130 358 432 1.6E-15 T 14-10-2018 Amir_2465 426aa6bee3050ed8913f128f2c02a09c 597 Gene3D G3DSA:3.30.450.20 219 357 1.7E-10 T 14-10-2018 Amir_2465 426aa6bee3050ed8913f128f2c02a09c 597 SUPERFAMILY SSF55874 418 584 4.16E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2465 426aa6bee3050ed8913f128f2c02a09c 597 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 512 585 8.3E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2004 1906592ee91f94a77a9559cf316e560e 193 SUPERFAMILY SSF46689 11 92 4.99E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2004 1906592ee91f94a77a9559cf316e560e 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 3.4E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2004 1906592ee91f94a77a9559cf316e560e 193 SUPERFAMILY SSF48498 89 191 3.71E-12 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_2004 1906592ee91f94a77a9559cf316e560e 193 Gene3D G3DSA:1.10.357.10 6 193 2.9E-48 T 14-10-2018 Amir_2004 1906592ee91f94a77a9559cf316e560e 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 7.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2004 1906592ee91f94a77a9559cf316e560e 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 7.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3945 779cebd8d60bcfc10428db1a5f956383 295 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 38 55 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Amir_3945 779cebd8d60bcfc10428db1a5f956383 295 PIRSF PIRSF000097 1 279 2.8E-76 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_3945 779cebd8d60bcfc10428db1a5f956383 295 SUPERFAMILY SSF51430 3 275 8.12E-82 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3945 779cebd8d60bcfc10428db1a5f956383 295 Gene3D G3DSA:3.20.20.100 1 285 8.7E-97 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3945 779cebd8d60bcfc10428db1a5f956383 295 PRINTS PR00069 Aldo-keto reductase signature 206 230 5.5E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_3945 779cebd8d60bcfc10428db1a5f956383 295 PRINTS PR00069 Aldo-keto reductase signature 90 108 5.5E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_3945 779cebd8d60bcfc10428db1a5f956383 295 PRINTS PR00069 Aldo-keto reductase signature 157 186 5.5E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_3945 779cebd8d60bcfc10428db1a5f956383 295 PRINTS PR00069 Aldo-keto reductase signature 34 58 5.5E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_3945 779cebd8d60bcfc10428db1a5f956383 295 PRINTS PR00069 Aldo-keto reductase signature 123 140 5.5E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_3945 779cebd8d60bcfc10428db1a5f956383 295 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Amir_3945 779cebd8d60bcfc10428db1a5f956383 295 Pfam PF00248 Aldo/keto reductase family 23 270 7.1E-40 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 Hamap MF_01382 Protein translocase subunit SecA [secA]. 11 727 15.14 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 SMART SM00957 12 387 1.6E-132 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 SUPERFAMILY SSF52540 9 556 1.4E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 TIGRFAM TIGR04221 SecA2_Mycobac: accessory Sec system translocase SecA2 11 770 0.0 T 14-10-2018 IPR026389 Protein translocase subunit SecA, Actinobacteria-type Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 Pfam PF07516 SecA Wing and Scaffold domain 641 722 2.1E-14 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 PRINTS PR00906 SecA protein signature 361 378 1.2E-35 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 PRINTS PR00906 SecA protein signature 66 90 1.2E-35 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 PRINTS PR00906 SecA protein signature 104 118 1.2E-35 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 PRINTS PR00906 SecA protein signature 324 346 1.2E-35 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 PRINTS PR00906 SecA protein signature 173 193 1.2E-35 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 PRINTS PR00906 SecA protein signature 398 411 1.2E-35 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 Gene3D G3DSA:3.90.1440.10 232 353 1.2E-115 T 14-10-2018 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 Gene3D G3DSA:3.40.50.300 29 400 1.2E-115 T 14-10-2018 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 Pfam PF07517 SecA DEAD-like domain 15 386 1.4E-80 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 Gene3D G3DSA:1.10.3060.10 583 732 2.1E-28 T 14-10-2018 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 SMART SM00958 235 343 2.3E-27 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 ProSitePatterns PS01312 SecA family signature. 485 500 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 SUPERFAMILY SSF81767 241 351 5.75E-30 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 SUPERFAMILY SSF52540 404 565 1.36E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 SUPERFAMILY SSF81886 585 734 1.83E-28 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 Pfam PF01043 SecA preprotein cross-linking domain 242 343 2.7E-22 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 Gene3D G3DSA:3.40.50.300 506 574 5.8E-20 T 14-10-2018 Amir_1595 9ee8d681fe3d96ba0e2bc70cdb0ac01f 772 Gene3D G3DSA:3.40.50.300 403 505 3.7E-32 T 14-10-2018 Amir_1940 8352cba472bd6d0e4918768eb8f679e8 306 SMART SM00382 34 209 6.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1940 8352cba472bd6d0e4918768eb8f679e8 306 Gene3D G3DSA:3.40.50.300 2 230 1.0E-59 T 14-10-2018 Amir_1940 8352cba472bd6d0e4918768eb8f679e8 306 SUPERFAMILY SSF52540 6 224 9.01E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1940 8352cba472bd6d0e4918768eb8f679e8 306 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_1940 8352cba472bd6d0e4918768eb8f679e8 306 Pfam PF00005 ABC transporter 26 162 5.0E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5762 db425aa21219a09d75f2ddc83841e12d 466 Gene3D G3DSA:3.40.1190.10 98 314 2.4E-64 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amir_5762 db425aa21219a09d75f2ddc83841e12d 466 Gene3D G3DSA:3.40.50.720 6 97 5.7E-30 T 14-10-2018 Amir_5762 db425aa21219a09d75f2ddc83841e12d 466 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 464 38.167 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_5762 db425aa21219a09d75f2ddc83841e12d 466 SUPERFAMILY SSF53623 95 315 6.41E-53 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amir_5762 db425aa21219a09d75f2ddc83841e12d 466 SUPERFAMILY SSF53244 316 462 1.02E-45 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amir_5762 db425aa21219a09d75f2ddc83841e12d 466 Pfam PF01225 Mur ligase family, catalytic domain 8 110 1.3E-26 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Amir_5762 db425aa21219a09d75f2ddc83841e12d 466 SUPERFAMILY SSF51984 7 95 1.31E-23 T 14-10-2018 Amir_5762 db425aa21219a09d75f2ddc83841e12d 466 Pfam PF02875 Mur ligase family, glutamate ligase domain 317 402 6.9E-25 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Amir_5762 db425aa21219a09d75f2ddc83841e12d 466 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 8 456 1.2E-145 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_5762 db425aa21219a09d75f2ddc83841e12d 466 Pfam PF08245 Mur ligase middle domain 114 297 5.3E-28 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Amir_5762 db425aa21219a09d75f2ddc83841e12d 466 Gene3D G3DSA:3.90.190.20 315 465 7.7E-53 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amir_4573 4e33c1836a29e8775b5949bc8650d25f 235 Gene3D G3DSA:3.40.50.1000 14 198 3.3E-34 T 14-10-2018 IPR023214 HAD superfamily Amir_4573 4e33c1836a29e8775b5949bc8650d25f 235 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 185 3.2E-19 T 14-10-2018 Amir_4573 4e33c1836a29e8775b5949bc8650d25f 235 Gene3D G3DSA:1.10.150.240 26 85 3.3E-34 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Amir_4573 4e33c1836a29e8775b5949bc8650d25f 235 SUPERFAMILY SSF56784 11 213 5.08E-38 T 14-10-2018 IPR036412 HAD-like superfamily Amir_6634 993065d4c3c96a9cc0e72e5891be36d7 260 Pfam PF02405 Permease MlaE 39 249 1.4E-67 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Amir_4163 7e7c34824565c23a60767b1cb3699206 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 67 328 4.7E-30 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Amir_4163 7e7c34824565c23a60767b1cb3699206 328 PIRSF PIRSF017082 1 328 7.8E-97 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Amir_4163 7e7c34824565c23a60767b1cb3699206 328 Gene3D G3DSA:3.40.190.150 36 321 3.1E-68 T 14-10-2018 Amir_4163 7e7c34824565c23a60767b1cb3699206 328 Gene3D G3DSA:3.40.190.10 132 256 3.1E-68 T 14-10-2018 Amir_4163 7e7c34824565c23a60767b1cb3699206 328 SUPERFAMILY SSF53850 120 282 6.73E-9 T 14-10-2018 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SUPERFAMILY SSF53901 30 404 3.16E-102 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Gene3D G3DSA:3.30.70.3290 2215 2608 1.2E-111 T 14-10-2018 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SUPERFAMILY SSF52151 554 835 1.1E-60 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Pfam PF08990 Erythronolide synthase docking 2 26 2.1E-7 T 14-10-2018 IPR015083 Polyketide synthase, docking domain GO:0016740|GO:0048037 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Gene3D G3DSA:3.40.366.10 2277 2563 1.2E-111 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Gene3D G3DSA:3.40.366.10 556 846 8.4E-139 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SUPERFAMILY SSF47336 3271 3349 7.59E-18 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1328 1506 3.0E-54 T 14-10-2018 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3010 3185 7.3E-47 T 14-10-2018 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Pfam PF14765 Polyketide synthase dehydratase 907 1169 2.2E-47 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SUPERFAMILY SSF51735 2798 2998 2.95E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Gene3D G3DSA:1.10.1200.10 1569 1661 1.2E-33 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SUPERFAMILY SSF55048 678 737 1.7E-9 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SMART SM00823 Phosphopantetheine attachment site 1588 1660 1.8E-35 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SMART SM00823 Phosphopantetheine attachment site 3274 3346 8.7E-23 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 197 213 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Gene3D G3DSA:3.10.129.110 897 1174 4.1E-95 T 14-10-2018 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Gene3D G3DSA:3.10.129.110 2613 2878 2.2E-29 T 14-10-2018 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Gene3D G3DSA:3.40.50.720 1175 1557 1.2E-109 T 14-10-2018 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Gene3D G3DSA:3.30.70.3290 475 889 8.4E-139 T 14-10-2018 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Gene3D G3DSA:1.10.1200.10 3258 3349 1.5E-25 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 410 521 1.1E-11 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1923 2037 8.7E-44 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 292 407 1.4E-42 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SUPERFAMILY SSF52151 2276 2552 2.51E-51 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SUPERFAMILY SSF51735 1326 1583 9.95E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Gene3D G3DSA:3.40.47.10 1676 2132 8.2E-182 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SMART SM00825 Beta-ketoacyl synthase 36 460 1.6E-202 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SMART SM00825 Beta-ketoacyl synthase 1680 2091 3.2E-205 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Gene3D G3DSA:3.40.47.10 25 474 4.6E-179 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SUPERFAMILY SSF55048 2404 2462 4.19E-9 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Pfam PF00698 Acyl transferase domain 2278 2578 2.3E-41 T 14-10-2018 IPR014043 Acyl transferase Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Pfam PF00698 Acyl transferase domain 557 861 3.7E-78 T 14-10-2018 IPR014043 Acyl transferase Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1828 1844 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SUPERFAMILY SSF51735 1177 1313 2.95E-13 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SUPERFAMILY SSF53901 1675 2037 1.11E-97 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1615 1630 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 34 284 5.5E-83 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1678 1915 1.0E-79 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SUPERFAMILY SSF51735 3010 3266 3.64E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 558 843 4.1E-95 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 2279 2560 1.5E-82 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Pfam PF00550 Phosphopantetheine attachment site 3277 3342 5.2E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Pfam PF00550 Phosphopantetheine attachment site 1591 1656 3.0E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SMART SM00826 2619 2771 1.2E-9 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SMART SM00826 907 1066 9.6E-65 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SMART SM01294 1589 1656 8.1E-6 T 14-10-2018 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Gene3D G3DSA:3.40.50.720 2879 3232 8.3E-85 T 14-10-2018 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 SUPERFAMILY SSF47336 1583 1693 7.46E-25 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Pfam PF08659 KR domain 3011 3183 1.9E-50 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3180 5f0cb4981afe64e106c2a7c5cc6d0725 3355 Pfam PF08659 KR domain 1328 1505 1.9E-56 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_6922 08246e4a3134b7453da09764b04d0076 192 Pfam PF08281 Sigma-70, region 4 133 185 2.1E-19 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_6922 08246e4a3134b7453da09764b04d0076 192 SUPERFAMILY SSF88659 118 191 1.07E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_6922 08246e4a3134b7453da09764b04d0076 192 SUPERFAMILY SSF88946 37 111 2.94E-14 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6922 08246e4a3134b7453da09764b04d0076 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 37 188 3.1E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_6922 08246e4a3134b7453da09764b04d0076 192 Gene3D G3DSA:1.10.1740.10 35 132 1.7E-11 T 14-10-2018 Amir_6922 08246e4a3134b7453da09764b04d0076 192 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 37 190 1.4E-47 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 Amir_6922 08246e4a3134b7453da09764b04d0076 192 Gene3D G3DSA:1.10.10.10 133 192 1.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6922 08246e4a3134b7453da09764b04d0076 192 Pfam PF04542 Sigma-70 region 2 40 106 7.2E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_0296 ff9d91ae74cbb1f7bcb6c6bed9960eab 677 Gene3D G3DSA:1.10.3470.10 2 334 7.4E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_0296 ff9d91ae74cbb1f7bcb6c6bed9960eab 677 Gene3D G3DSA:1.10.3470.10 349 676 9.6E-86 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_0296 ff9d91ae74cbb1f7bcb6c6bed9960eab 677 SUPERFAMILY SSF81345 3 327 8.37E-57 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_0296 ff9d91ae74cbb1f7bcb6c6bed9960eab 677 Pfam PF01032 FecCD transport family 15 328 7.6E-67 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_0296 ff9d91ae74cbb1f7bcb6c6bed9960eab 677 Pfam PF01032 FecCD transport family 364 671 2.2E-81 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_0296 ff9d91ae74cbb1f7bcb6c6bed9960eab 677 SUPERFAMILY SSF81345 349 671 2.75E-72 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_3147 7797111a583badcf397ad2c73cc71c25 183 Gene3D G3DSA:1.10.357.10 50 182 3.8E-29 T 14-10-2018 Amir_3147 7797111a583badcf397ad2c73cc71c25 183 Pfam PF13305 WHG domain 83 157 2.1E-10 T 14-10-2018 IPR025996 WHG domain Amir_3147 7797111a583badcf397ad2c73cc71c25 183 Gene3D G3DSA:1.10.10.60 1 48 2.6E-15 T 14-10-2018 Amir_3147 7797111a583badcf397ad2c73cc71c25 183 SUPERFAMILY SSF48498 77 180 2.03E-21 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3147 7797111a583badcf397ad2c73cc71c25 183 SUPERFAMILY SSF46689 4 71 3.18E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3147 7797111a583badcf397ad2c73cc71c25 183 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 46 1.3E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3147 7797111a583badcf397ad2c73cc71c25 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 9.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3147 7797111a583badcf397ad2c73cc71c25 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 9.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1883 a6903893941b752f09d0802f65a6488d 321 Gene3D G3DSA:3.40.50.2020 15 308 1.4E-96 T 14-10-2018 Amir_1883 a6903893941b752f09d0802f65a6488d 321 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 12 128 9.1E-39 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Amir_1883 a6903893941b752f09d0802f65a6488d 321 Pfam PF14572 Phosphoribosyl synthetase-associated domain 212 319 2.0E-18 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Amir_1883 a6903893941b752f09d0802f65a6488d 321 SMART SM01400 12 128 3.1E-62 T 14-10-2018 Amir_1883 a6903893941b752f09d0802f65a6488d 321 SUPERFAMILY SSF53271 77 312 1.41E-44 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Amir_1883 a6903893941b752f09d0802f65a6488d 321 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 12 320 2.2E-92 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Amir_1883 a6903893941b752f09d0802f65a6488d 321 Gene3D G3DSA:3.40.50.2020 155 296 1.4E-96 T 14-10-2018 Amir_5337 7101cfed0aeaaf0830069570a2b6a1ab 157 SUPERFAMILY SSF50129 6 44 2.36E-7 T 14-10-2018 IPR011032 GroES-like superfamily Amir_5337 7101cfed0aeaaf0830069570a2b6a1ab 157 Gene3D G3DSA:3.40.50.720 52 100 6.2E-17 T 14-10-2018 Amir_5337 7101cfed0aeaaf0830069570a2b6a1ab 157 Gene3D G3DSA:3.90.180.10 3 37 2.6E-7 T 14-10-2018 Amir_5337 7101cfed0aeaaf0830069570a2b6a1ab 157 Gene3D G3DSA:3.90.180.10 101 154 6.2E-17 T 14-10-2018 Amir_5337 7101cfed0aeaaf0830069570a2b6a1ab 157 Pfam PF13602 Zinc-binding dehydrogenase 52 154 6.8E-13 T 14-10-2018 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 615 36.373 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 PRINTS PR00301 70kDa heat shock protein signature 340 360 3.0E-75 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 PRINTS PR00301 70kDa heat shock protein signature 363 382 3.0E-75 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.0E-75 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 PRINTS PR00301 70kDa heat shock protein signature 115 135 3.0E-75 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.0E-75 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 PRINTS PR00301 70kDa heat shock protein signature 308 324 3.0E-75 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 PRINTS PR00301 70kDa heat shock protein signature 444 460 3.0E-75 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.0E-75 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 PRINTS PR00301 70kDa heat shock protein signature 175 185 3.0E-75 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 311 325 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 Gene3D G3DSA:3.90.640.10 201 289 8.1E-145 T 14-10-2018 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 SUPERFAMILY SSF53067 4 161 7.45E-57 T 14-10-2018 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 Pfam PF00012 Hsp70 protein 77 578 4.1E-218 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 Gene3D G3DSA:1.20.1270.10 482 582 1.8E-30 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 169 182 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 Gene3D G3DSA:3.30.420.40 5 352 8.1E-145 T 14-10-2018 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 SUPERFAMILY SSF100934 482 580 1.1E-15 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 Gene3D G3DSA:2.60.34.10 353 479 1.0E-59 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 SUPERFAMILY SSF100920 359 515 6.28E-60 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 4 578 7.1E-278 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 SUPERFAMILY SSF53067 163 357 1.3E-63 T 14-10-2018 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Amir_6949 00990c7201d23b55a83eb83e792a9fb1 619 Gene3D G3DSA:3.30.420.40 163 340 8.1E-145 T 14-10-2018 Amir_0644 1059a1d2d6525fd465cacac33c4e3433 473 SUPERFAMILY SSF53955 391 473 5.51E-30 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Amir_0644 1059a1d2d6525fd465cacac33c4e3433 473 Pfam PF03990 Domain of unknown function (DUF348) 142 181 5.7E-15 T 14-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 Amir_0644 1059a1d2d6525fd465cacac33c4e3433 473 Pfam PF03990 Domain of unknown function (DUF348) 265 298 1.1E-7 T 14-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 Amir_0644 1059a1d2d6525fd465cacac33c4e3433 473 SMART SM01208 311 389 3.2E-21 T 14-10-2018 IPR011098 G5 domain Amir_0644 1059a1d2d6525fd465cacac33c4e3433 473 Pfam PF06737 Transglycosylase-like domain 394 467 1.1E-30 T 14-10-2018 IPR010618 Transglycosylase-like Amir_0644 1059a1d2d6525fd465cacac33c4e3433 473 Pfam PF07501 G5 domain 318 388 5.7E-16 T 14-10-2018 IPR011098 G5 domain Amir_0644 1059a1d2d6525fd465cacac33c4e3433 473 Gene3D G3DSA:2.20.230.10 309 392 7.5E-17 T 14-10-2018 Amir_0644 1059a1d2d6525fd465cacac33c4e3433 473 Gene3D G3DSA:1.10.530.10 393 473 2.6E-32 T 14-10-2018 Amir_1690 d0838c25d9fcda7681d23a3998127d9d 368 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 368 158.335 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Amir_1690 d0838c25d9fcda7681d23a3998127d9d 368 Gene3D G3DSA:1.10.10.10 286 364 6.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1690 d0838c25d9fcda7681d23a3998127d9d 368 Gene3D G3DSA:1.10.8.60 211 285 7.8E-30 T 14-10-2018 Amir_1690 d0838c25d9fcda7681d23a3998127d9d 368 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 53 355 1.1E-136 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Amir_1690 d0838c25d9fcda7681d23a3998127d9d 368 SMART SM00382 80 213 3.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1690 d0838c25d9fcda7681d23a3998127d9d 368 Gene3D G3DSA:3.40.50.300 49 210 3.4E-36 T 14-10-2018 Amir_1690 d0838c25d9fcda7681d23a3998127d9d 368 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 35 264 7.0E-107 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Amir_1690 d0838c25d9fcda7681d23a3998127d9d 368 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 282 356 2.0E-23 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Amir_1690 d0838c25d9fcda7681d23a3998127d9d 368 SUPERFAMILY SSF46785 285 359 5.99E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1690 d0838c25d9fcda7681d23a3998127d9d 368 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 282 355 9.2E-30 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Amir_1690 d0838c25d9fcda7681d23a3998127d9d 368 SUPERFAMILY SSF52540 49 279 2.6E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1588 6b6f44d0e151de0185f2b584abd92532 234 PIRSF PIRSF000709 9 188 5.1E-18 T 14-10-2018 Amir_1588 6b6f44d0e151de0185f2b584abd92532 234 SMART SM00855 9 176 1.4E-5 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_1588 6b6f44d0e151de0185f2b584abd92532 234 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 9 215 6.4E-30 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_1588 6b6f44d0e151de0185f2b584abd92532 234 Gene3D G3DSA:3.40.50.1240 7 225 3.3E-39 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_1588 6b6f44d0e151de0185f2b584abd92532 234 SUPERFAMILY SSF53254 9 226 5.78E-39 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_3575 7a2e100326c497a7c63b208c8c8e414d 416 Pfam PF05977 Transmembrane secretion effector 13 400 1.1E-26 T 14-10-2018 IPR010290 Transmembrane secretion effector Amir_3575 7a2e100326c497a7c63b208c8c8e414d 416 PRINTS PR01988 Putative bacilysin exporter bacE signature 357 380 7.3E-5 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amir_3575 7a2e100326c497a7c63b208c8c8e414d 416 PRINTS PR01988 Putative bacilysin exporter bacE signature 23 45 7.3E-5 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amir_3575 7a2e100326c497a7c63b208c8c8e414d 416 PRINTS PR01988 Putative bacilysin exporter bacE signature 59 77 7.3E-5 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amir_3575 7a2e100326c497a7c63b208c8c8e414d 416 PRINTS PR01988 Putative bacilysin exporter bacE signature 152 173 7.3E-5 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amir_3575 7a2e100326c497a7c63b208c8c8e414d 416 Gene3D G3DSA:1.20.1250.20 13 409 2.4E-34 T 14-10-2018 Amir_3575 7a2e100326c497a7c63b208c8c8e414d 416 SUPERFAMILY SSF103473 21 411 2.49E-37 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_6264 52a1feb9409909c17651555ca13390c0 391 PIRSF PIRSF001235 1 391 1.1E-107 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Amir_6264 52a1feb9409909c17651555ca13390c0 391 SUPERFAMILY SSF55031 203 309 2.62E-19 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amir_6264 52a1feb9409909c17651555ca13390c0 391 Pfam PF01546 Peptidase family M20/M25/M40 68 387 7.7E-24 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Amir_6264 52a1feb9409909c17651555ca13390c0 391 Gene3D G3DSA:3.30.70.360 201 312 2.3E-106 T 14-10-2018 Amir_6264 52a1feb9409909c17651555ca13390c0 391 Gene3D G3DSA:3.40.630.10 15 383 2.3E-106 T 14-10-2018 Amir_6264 52a1feb9409909c17651555ca13390c0 391 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 3 386 1.1E-79 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Amir_6264 52a1feb9409909c17651555ca13390c0 391 SUPERFAMILY SSF53187 4 390 3.59E-61 T 14-10-2018 Amir_2607 34b52b29da3c6f63eca67d6dd3d6579c 243 Pfam PF03861 ANTAR domain 182 232 2.5E-19 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_2607 34b52b29da3c6f63eca67d6dd3d6579c 243 SMART SM01012 179 234 7.7E-22 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_2607 34b52b29da3c6f63eca67d6dd3d6579c 243 PIRSF PIRSF036625 8 242 1.4E-49 T 14-10-2018 IPR012074 GAF-ANTAR transcription anti-termination regulator, putative Amir_2607 34b52b29da3c6f63eca67d6dd3d6579c 243 Gene3D G3DSA:3.30.450.40 7 181 1.4E-11 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_2607 34b52b29da3c6f63eca67d6dd3d6579c 243 Pfam PF13185 GAF domain 29 167 2.0E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2607 34b52b29da3c6f63eca67d6dd3d6579c 243 SUPERFAMILY SSF52172 161 233 2.53E-9 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2607 34b52b29da3c6f63eca67d6dd3d6579c 243 Gene3D G3DSA:1.10.10.10 182 240 4.3E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2607 34b52b29da3c6f63eca67d6dd3d6579c 243 SUPERFAMILY SSF55781 30 174 2.18E-12 T 14-10-2018 Amir_0977 5651fca6094d4d9b3f96d2bf09d49e43 751 SUPERFAMILY SSF48576 3 335 1.73E-63 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_0977 5651fca6094d4d9b3f96d2bf09d49e43 751 SUPERFAMILY SSF48576 378 706 6.62E-57 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_0977 5651fca6094d4d9b3f96d2bf09d49e43 751 Gene3D G3DSA:1.10.600.10 2 336 1.9E-94 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_0977 5651fca6094d4d9b3f96d2bf09d49e43 751 Gene3D G3DSA:1.10.600.10 379 704 1.4E-74 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_2236 99dada945a04f7b761d44251dad736ad 304 Gene3D G3DSA:3.20.20.100 1 280 1.2E-31 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_2236 99dada945a04f7b761d44251dad736ad 304 SUPERFAMILY SSF51430 35 288 3.8E-26 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_2236 99dada945a04f7b761d44251dad736ad 304 Pfam PF00248 Aldo/keto reductase family 40 287 6.2E-13 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_4600 c0c8825479a6340b65af9a541eea4d8b 73 Pfam PF03621 MbtH-like protein 2 52 1.7E-25 T 14-10-2018 IPR005153 MbtH-like domain Amir_4600 c0c8825479a6340b65af9a541eea4d8b 73 SMART SM00923 2 52 3.2E-27 T 14-10-2018 IPR005153 MbtH-like domain Amir_4600 c0c8825479a6340b65af9a541eea4d8b 73 SUPERFAMILY SSF160582 1 65 4.45E-28 T 14-10-2018 IPR038020 MbtH-like domain superfamily Amir_4600 c0c8825479a6340b65af9a541eea4d8b 73 Gene3D G3DSA:3.90.820.10 1 67 1.1E-31 T 14-10-2018 Amir_0257 07befd5e0d9982e3d1cf55a526d3c021 246 Pfam PF00293 NUDIX domain 66 183 3.3E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_0257 07befd5e0d9982e3d1cf55a526d3c021 246 SUPERFAMILY SSF55811 61 218 1.9E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_0257 07befd5e0d9982e3d1cf55a526d3c021 246 Gene3D G3DSA:3.90.79.10 55 225 1.8E-35 T 14-10-2018 Amir_2380 aac57419fb8d519bca784fe7009979bb 670 Gene3D G3DSA:3.30.565.10 517 670 5.4E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2380 aac57419fb8d519bca784fe7009979bb 670 Pfam PF00512 His Kinase A (phospho-acceptor) domain 442 509 1.8E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2380 aac57419fb8d519bca784fe7009979bb 670 Pfam PF13188 PAS domain 329 365 2.8E-4 T 14-10-2018 IPR000014 PAS domain Amir_2380 aac57419fb8d519bca784fe7009979bb 670 SUPERFAMILY SSF55785 327 419 2.79E-7 T 14-10-2018 IPR035965 PAS domain superfamily Amir_2380 aac57419fb8d519bca784fe7009979bb 670 Pfam PF05231 MASE1 20 302 1.5E-9 T 14-10-2018 IPR007895 MASE1 Amir_2380 aac57419fb8d519bca784fe7009979bb 670 SMART SM00388 441 513 1.4E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2380 aac57419fb8d519bca784fe7009979bb 670 Gene3D G3DSA:1.10.287.130 433 512 3.1E-7 T 14-10-2018 Amir_2380 aac57419fb8d519bca784fe7009979bb 670 SUPERFAMILY SSF47384 427 508 1.67E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_2380 aac57419fb8d519bca784fe7009979bb 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 625 3.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2380 aac57419fb8d519bca784fe7009979bb 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 611 3.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2380 aac57419fb8d519bca784fe7009979bb 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 630 648 3.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2380 aac57419fb8d519bca784fe7009979bb 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 667 3.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2380 aac57419fb8d519bca784fe7009979bb 670 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 558 668 1.1E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2380 aac57419fb8d519bca784fe7009979bb 670 SUPERFAMILY SSF55874 509 668 9.17E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2380 aac57419fb8d519bca784fe7009979bb 670 Gene3D G3DSA:3.30.450.20 315 432 2.3E-8 T 14-10-2018 Amir_2380 aac57419fb8d519bca784fe7009979bb 670 SMART SM00387 557 670 3.4E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 SMART SM00482 644 851 3.7E-110 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 Gene3D G3DSA:3.40.50.1010 9 283 1.5E-88 T 14-10-2018 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 Gene3D G3DSA:1.20.1060.10 502 616 2.1E-32 T 14-10-2018 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 SUPERFAMILY SSF56672 482 886 1.07E-137 T 14-10-2018 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 SMART SM00474 308 477 8.4E-7 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 ProSitePatterns PS00447 DNA polymerase family A signature. 713 732 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 Gene3D G3DSA:3.30.420.10 330 500 2.2E-31 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 TIGRFAM TIGR00593 pola: DNA polymerase I 9 886 1.3E-296 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 SUPERFAMILY SSF53098 319 477 1.67E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 SMART SM00475 7 267 1.5E-126 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 SMART SM00279 179 214 4.2E-7 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 Gene3D G3DSA:3.30.70.370 622 883 1.5E-102 T 14-10-2018 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 SUPERFAMILY SSF47807 177 290 8.67E-26 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 8 175 5.7E-54 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 Pfam PF00476 DNA polymerase family A 509 885 2.0E-144 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 Gene3D G3DSA:1.10.150.20 180 252 1.5E-88 T 14-10-2018 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 Gene3D G3DSA:1.10.150.20 668 811 1.5E-102 T 14-10-2018 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 PRINTS PR00868 DNA-polymerase family A (pol I) signature 659 682 2.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 PRINTS PR00868 DNA-polymerase family A (pol I) signature 689 702 2.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 PRINTS PR00868 DNA-polymerase family A (pol I) signature 750 761 2.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 PRINTS PR00868 DNA-polymerase family A (pol I) signature 713 738 2.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 PRINTS PR00868 DNA-polymerase family A (pol I) signature 834 847 2.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 PRINTS PR00868 DNA-polymerase family A (pol I) signature 613 635 2.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 PRINTS PR00868 DNA-polymerase family A (pol I) signature 636 651 2.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 PRINTS PR00868 DNA-polymerase family A (pol I) signature 772 783 2.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 PRINTS PR00868 DNA-polymerase family A (pol I) signature 804 820 2.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 SUPERFAMILY SSF88723 8 159 1.93E-52 T 14-10-2018 IPR029060 PIN-like domain superfamily Amir_5532 d180a22964237b0d8a804ce0ce188b30 888 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 177 271 2.1E-22 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Amir_4813 c89ea1413bcdae55f7219fedc4e0c750 202 SUPERFAMILY SSF52540 22 194 1.27E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4813 c89ea1413bcdae55f7219fedc4e0c750 202 Pfam PF03029 Conserved hypothetical ATP binding protein 27 192 6.1E-25 T 14-10-2018 IPR004130 GPN-loop GTPase Amir_4813 c89ea1413bcdae55f7219fedc4e0c750 202 Gene3D G3DSA:3.40.50.300 16 198 5.3E-15 T 14-10-2018 Amir_4813 c89ea1413bcdae55f7219fedc4e0c750 202 PRINTS PR00449 Transforming protein P21 ras signature 23 44 8.1E-5 T 14-10-2018 Amir_4813 c89ea1413bcdae55f7219fedc4e0c750 202 PRINTS PR00449 Transforming protein P21 ras signature 170 192 8.1E-5 T 14-10-2018 Amir_1130 166def0378a751c6a85b1c154f3334c1 566 Pfam PF00128 Alpha amylase, catalytic domain 96 348 8.4E-22 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_1130 166def0378a751c6a85b1c154f3334c1 566 SMART SM00642 44 378 1.7E-89 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_1130 166def0378a751c6a85b1c154f3334c1 566 SMART SM00632 387 466 1.7E-35 T 14-10-2018 IPR031319 Alpha-amylase, C-terminal domain Reactome: R-HSA-189085 Amir_1130 166def0378a751c6a85b1c154f3334c1 566 SUPERFAMILY SSF51011 383 465 3.3E-26 T 14-10-2018 Amir_1130 166def0378a751c6a85b1c154f3334c1 566 Gene3D G3DSA:2.60.40.1180 384 466 6.8E-27 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_1130 166def0378a751c6a85b1c154f3334c1 566 PRINTS PR00110 Alpha-amylase signature 295 307 6.2E-22 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Amir_1130 166def0378a751c6a85b1c154f3334c1 566 PRINTS PR00110 Alpha-amylase signature 119 130 6.2E-22 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Amir_1130 166def0378a751c6a85b1c154f3334c1 566 PRINTS PR00110 Alpha-amylase signature 87 104 6.2E-22 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Amir_1130 166def0378a751c6a85b1c154f3334c1 566 PRINTS PR00110 Alpha-amylase signature 237 255 6.2E-22 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Amir_1130 166def0378a751c6a85b1c154f3334c1 566 PRINTS PR00110 Alpha-amylase signature 208 219 6.2E-22 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Amir_1130 166def0378a751c6a85b1c154f3334c1 566 Gene3D G3DSA:2.60.40.10 468 566 1.5E-31 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_1130 166def0378a751c6a85b1c154f3334c1 566 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 390 463 4.8E-10 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Amir_1130 166def0378a751c6a85b1c154f3334c1 566 SUPERFAMILY SSF51445 43 380 2.0E-86 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1130 166def0378a751c6a85b1c154f3334c1 566 SUPERFAMILY SSF49452 477 559 2.45E-27 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Amir_1130 166def0378a751c6a85b1c154f3334c1 566 SMART SM01065 474 566 2.7E-27 T 14-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 Amir_1130 166def0378a751c6a85b1c154f3334c1 566 Pfam PF00686 Starch binding domain 478 561 5.7E-28 T 14-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 Amir_1130 166def0378a751c6a85b1c154f3334c1 566 Gene3D G3DSA:3.20.20.80 42 383 1.2E-144 T 14-10-2018 Amir_6079 d43de617ec4c5d2437fab2797bc97c56 326 Gene3D G3DSA:1.25.40.10 191 239 5.9E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6079 d43de617ec4c5d2437fab2797bc97c56 326 Gene3D G3DSA:3.40.30.10 57 167 1.2E-18 T 14-10-2018 Amir_6079 d43de617ec4c5d2437fab2797bc97c56 326 Gene3D G3DSA:1.25.40.10 246 326 3.5E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6079 d43de617ec4c5d2437fab2797bc97c56 326 Pfam PF00085 Thioredoxin 62 164 1.5E-12 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 Amir_6079 d43de617ec4c5d2437fab2797bc97c56 326 Pfam PF14561 Tetratricopeptide repeat 247 326 2.7E-20 T 14-10-2018 Amir_6079 d43de617ec4c5d2437fab2797bc97c56 326 SUPERFAMILY SSF52833 60 168 6.61E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3026 3041 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2200 2318 4.1E-12 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SMART SM00825 Beta-ketoacyl synthase 31 488 6.5E-227 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SMART SM00825 Beta-ketoacyl synthase 1828 2248 2.5E-209 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Gene3D G3DSA:3.40.47.10 27 533 3.4E-181 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Gene3D G3DSA:3.40.366.10 2352 2651 5.9E-144 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Gene3D G3DSA:3.40.366.10 699 996 1.1E-136 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SUPERFAMILY SSF53901 28 403 2.15E-98 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Gene3D G3DSA:3.30.70.3290 613 1038 1.1E-136 T 14-10-2018 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1463 1637 6.7E-48 T 14-10-2018 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Gene3D G3DSA:3.30.70.3290 2270 2694 5.9E-144 T 14-10-2018 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1986 2002 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SMART SM00826 1057 1211 7.8E-69 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 701 993 5.0E-96 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 2354 2657 8.6E-98 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SUPERFAMILY SSF47336 1718 1841 1.57E-21 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2081 2197 1.4E-42 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 287 404 4.8E-43 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1746 1761 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Pfam PF00698 Acyl transferase domain 2353 2633 2.1E-52 T 14-10-2018 IPR014043 Acyl transferase Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Pfam PF00698 Acyl transferase domain 700 1011 2.4E-77 T 14-10-2018 IPR014043 Acyl transferase Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SUPERFAMILY SSF53901 1824 2195 1.24E-102 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Pfam PF14765 Polyketide synthase dehydratase 1057 1319 1.7E-50 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 192 208 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SUPERFAMILY SSF52151 2351 2640 9.68E-68 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SUPERFAMILY SSF51735 1461 1703 3.85E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SMART SM01294 3001 3067 2.4E-5 T 14-10-2018 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SMART SM01294 1721 1787 1.1E-6 T 14-10-2018 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Gene3D G3DSA:1.10.1200.10 2987 3072 1.7E-27 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SUPERFAMILY SSF52151 697 989 1.31E-59 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Pfam PF08659 KR domain 1464 1635 4.6E-52 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SUPERFAMILY SSF51735 1328 1450 5.51E-17 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SUPERFAMILY SSF47336 2995 3075 5.23E-19 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SMART SM00823 Phosphopantetheine attachment site 1720 1791 2.0E-28 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SMART SM00823 Phosphopantetheine attachment site 3000 3071 9.3E-27 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Gene3D G3DSA:1.10.1200.10 1713 1793 3.3E-27 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Gene3D G3DSA:3.10.129.110 1046 1323 2.9E-93 T 14-10-2018 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 29 279 8.3E-84 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1826 2073 8.9E-89 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Gene3D G3DSA:3.40.47.10 1822 2265 7.0E-182 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Pfam PF00550 Phosphopantetheine attachment site 3003 3066 7.9E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Pfam PF00550 Phosphopantetheine attachment site 1723 1787 6.6E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 Gene3D G3DSA:3.40.50.720 1326 1694 3.8E-93 T 14-10-2018 Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SUPERFAMILY SSF55048 822 883 4.58E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_3198 b63a1a4c3cb7cf519dd2760301c6a4a9 3148 SUPERFAMILY SSF55048 2481 2542 4.84E-12 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_1616 20b1aa65535402e47991d47249462dd0 471 Hamap MF_00195 GTPase Der [der]. 31 463 35.065 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Amir_1616 20b1aa65535402e47991d47249462dd0 471 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 32 460 8.5E-155 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Amir_1616 20b1aa65535402e47991d47249462dd0 471 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 153 2.8E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amir_1616 20b1aa65535402e47991d47249462dd0 471 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 207 364 5.1E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amir_1616 20b1aa65535402e47991d47249462dd0 471 SMART SM00382 30 168 0.46 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1616 20b1aa65535402e47991d47249462dd0 471 SMART SM00382 205 450 2.8 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1616 20b1aa65535402e47991d47249462dd0 471 Gene3D G3DSA:3.40.50.300 206 377 3.1E-40 T 14-10-2018 Amir_1616 20b1aa65535402e47991d47249462dd0 471 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 382 460 2.9E-26 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Amir_1616 20b1aa65535402e47991d47249462dd0 471 Gene3D G3DSA:3.30.300.20 382 463 8.5E-27 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Amir_1616 20b1aa65535402e47991d47249462dd0 471 SUPERFAMILY SSF52540 166 464 3.48E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1616 20b1aa65535402e47991d47249462dd0 471 PIRSF PIRSF006485 30 468 3.5E-160 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Amir_1616 20b1aa65535402e47991d47249462dd0 471 Gene3D G3DSA:3.40.50.300 30 190 5.6E-41 T 14-10-2018 Amir_1616 20b1aa65535402e47991d47249462dd0 471 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 209 229 3.0E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_1616 20b1aa65535402e47991d47249462dd0 471 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 258 273 3.0E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_1616 20b1aa65535402e47991d47249462dd0 471 Pfam PF01926 50S ribosome-binding GTPase 34 148 3.6E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_1616 20b1aa65535402e47991d47249462dd0 471 Pfam PF01926 50S ribosome-binding GTPase 208 326 7.6E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_1616 20b1aa65535402e47991d47249462dd0 471 SUPERFAMILY SSF52540 33 195 4.0E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4261 b8e8d9386e1281affb09126b06c109ba 429 SUPERFAMILY SSF55874 310 428 1.13E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4261 b8e8d9386e1281affb09126b06c109ba 429 Pfam PF07730 Histidine kinase 232 296 5.7E-17 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_4261 b8e8d9386e1281affb09126b06c109ba 429 Gene3D G3DSA:3.30.565.10 308 429 9.7E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6680 005d22b201522c4fbbe57d1c0346de88 252 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 160 221 1.0E-19 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6680 005d22b201522c4fbbe57d1c0346de88 252 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 80 240 28.761 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6680 005d22b201522c4fbbe57d1c0346de88 252 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 112 232 7.6E-43 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6680 005d22b201522c4fbbe57d1c0346de88 252 SUPERFAMILY SSF143243 95 248 2.75E-47 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6680 005d22b201522c4fbbe57d1c0346de88 252 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 110 231 2.6E-42 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6680 005d22b201522c4fbbe57d1c0346de88 252 Gene3D G3DSA:3.30.460.80 62 212 6.5E-48 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_3582 b6854a6eeed5c85a8b2d66ddcf8f9e5c 469 SUPERFAMILY SSF53686 111 398 4.71E-71 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amir_3582 b6854a6eeed5c85a8b2d66ddcf8f9e5c 469 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 122 388 2.3E-66 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amir_3582 b6854a6eeed5c85a8b2d66ddcf8f9e5c 469 Gene3D G3DSA:3.40.50.1100 152 244 1.1E-81 T 14-10-2018 Amir_3582 b6854a6eeed5c85a8b2d66ddcf8f9e5c 469 Gene3D G3DSA:3.40.50.1100 120 398 1.1E-81 T 14-10-2018 Amir_5721 3ce50bb08a61d54e8ad203c3525b13b7 383 Gene3D G3DSA:3.90.1150.10 35 377 2.3E-128 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_5721 3ce50bb08a61d54e8ad203c3525b13b7 383 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 30 382 53.738 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Amir_5721 3ce50bb08a61d54e8ad203c3525b13b7 383 Pfam PF00155 Aminotransferase class I and II 50 371 6.7E-53 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_5721 3ce50bb08a61d54e8ad203c3525b13b7 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 245 254 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Amir_5721 3ce50bb08a61d54e8ad203c3525b13b7 383 Gene3D G3DSA:3.40.640.10 72 295 2.3E-128 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_5721 3ce50bb08a61d54e8ad203c3525b13b7 383 SUPERFAMILY SSF53383 49 377 2.58E-70 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_5721 3ce50bb08a61d54e8ad203c3525b13b7 383 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 32 381 1.6E-98 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Amir_6589 5de14a4068d680693ea948a97dada80c 185 Pfam PF08044 Domain of unknown function (DUF1707) 4 50 1.4E-9 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 Amir_2284 c33a1b8b266c128c969a08519505b4ee 382 Pfam PF00296 Luciferase-like monooxygenase 1 294 7.5E-57 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_2284 c33a1b8b266c128c969a08519505b4ee 382 SUPERFAMILY SSF51679 1 327 6.41E-68 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_2284 c33a1b8b266c128c969a08519505b4ee 382 Gene3D G3DSA:3.20.20.30 1 342 2.5E-64 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_2284 c33a1b8b266c128c969a08519505b4ee 382 TIGRFAM TIGR04036 LLM_CE1758_fam: putative luciferase-like monooxygenase, FMN-dependent, CE1758 family 1 353 9.9E-215 T 14-10-2018 IPR023934 Luciferase-like monooxygenase, FMN-dependent, putative Amir_1826 1b55b4e29ff62f044207a4721e320a5b 771 SUPERFAMILY SSF52279 397 636 2.22E-45 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Amir_1826 1b55b4e29ff62f044207a4721e320a5b 771 SUPERFAMILY SSF51445 4 396 2.84E-88 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1826 1b55b4e29ff62f044207a4721e320a5b 771 Gene3D G3DSA:3.20.20.300 13 369 2.7E-95 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Amir_1826 1b55b4e29ff62f044207a4721e320a5b 771 SMART SM01217 667 736 3.3E-28 T 14-10-2018 IPR026891 Fibronectin type III-like domain Amir_1826 1b55b4e29ff62f044207a4721e320a5b 771 Gene3D G3DSA:2.60.40.10 641 753 7.7E-31 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_1826 1b55b4e29ff62f044207a4721e320a5b 771 Gene3D G3DSA:3.40.50.1700 383 634 7.7E-60 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Amir_1826 1b55b4e29ff62f044207a4721e320a5b 771 Pfam PF14310 Fibronectin type III-like domain 667 736 3.7E-20 T 14-10-2018 IPR026891 Fibronectin type III-like domain Amir_1826 1b55b4e29ff62f044207a4721e320a5b 771 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 397 633 1.1E-44 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 Amir_1826 1b55b4e29ff62f044207a4721e320a5b 771 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 25 353 3.2E-67 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_1826 1b55b4e29ff62f044207a4721e320a5b 771 PRINTS PR00133 Glycosyl hydrolase family 3 signature 202 218 8.6E-19 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_1826 1b55b4e29ff62f044207a4721e320a5b 771 PRINTS PR00133 Glycosyl hydrolase family 3 signature 273 291 8.6E-19 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_1826 1b55b4e29ff62f044207a4721e320a5b 771 PRINTS PR00133 Glycosyl hydrolase family 3 signature 102 118 8.6E-19 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_1826 1b55b4e29ff62f044207a4721e320a5b 771 PRINTS PR00133 Glycosyl hydrolase family 3 signature 171 187 8.6E-19 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_1826 1b55b4e29ff62f044207a4721e320a5b 771 PRINTS PR00133 Glycosyl hydrolase family 3 signature 125 144 8.6E-19 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 SUPERFAMILY SSF117074 931 1005 8.89E-15 T 14-10-2018 Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 SUPERFAMILY SSF117074 703 781 2.75E-14 T 14-10-2018 Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 SUPERFAMILY SSF117074 806 899 5.49E-15 T 14-10-2018 Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 SUPERFAMILY SSF117074 1020 1096 1.7E-14 T 14-10-2018 Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 SUPERFAMILY SSF117074 394 473 5.1E-9 T 14-10-2018 Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 Pfam PF17210 SdrD B-like domain 932 1003 4.0E-11 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 Pfam PF17210 SdrD B-like domain 1026 1093 5.0E-14 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 Pfam PF17210 SdrD B-like domain 818 889 9.4E-11 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 Pfam PF17210 SdrD B-like domain 711 780 1.5E-13 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 Pfam PF17210 SdrD B-like domain 401 472 3.2E-7 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 Gene3D G3DSA:2.60.40.10 613 704 3.1E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 Gene3D G3DSA:2.60.40.10 395 506 1.2E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 Gene3D G3DSA:2.60.40.10 707 815 1.9E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 Gene3D G3DSA:2.60.40.10 816 911 5.9E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 Gene3D G3DSA:2.60.40.10 513 612 1.0E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 Gene3D G3DSA:2.60.40.10 928 1017 4.6E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 Gene3D G3DSA:2.60.40.10 1022 1133 5.2E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 SUPERFAMILY SSF49464 614 689 2.24E-10 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 Pfam PF13620 Carboxypeptidase regulatory-like domain 515 575 1.8E-8 T 14-10-2018 Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 Pfam PF13620 Carboxypeptidase regulatory-like domain 614 667 7.6E-9 T 14-10-2018 Amir_3822 0ddf1cfb03c5b441e528c57cedd9a3b8 1243 SUPERFAMILY SSF49478 515 586 2.94E-11 T 14-10-2018 Amir_1377 90982e2bd8d26df726fa5b3b81d24ee7 93 Gene3D G3DSA:3.30.70.920 1 74 3.7E-19 T 14-10-2018 Amir_1377 90982e2bd8d26df726fa5b3b81d24ee7 93 SUPERFAMILY SSF54909 2 77 9.52E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_1377 90982e2bd8d26df726fa5b3b81d24ee7 93 Pfam PF01037 Lrp/AsnC ligand binding domain 6 76 1.4E-14 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 SMART SM00382 260 388 3.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 SMART SM00760 472 541 6.9E-33 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 24 562 1.1E-150 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 Pfam PF00308 Bacterial dnaA protein 228 445 1.4E-101 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 293 307 3.3E-51 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 261 281 3.3E-51 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 359 386 3.3E-51 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 325 339 3.3E-51 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 522 541 3.3E-51 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 Gene3D G3DSA:1.10.8.60 394 464 1.5E-24 T 14-10-2018 Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 Gene3D G3DSA:1.10.1750.10 468 568 3.6E-34 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 SUPERFAMILY SSF48295 459 564 3.92E-33 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 475 541 9.8E-27 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 ProSitePatterns PS01008 DnaA protein signature. 522 541 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 Gene3D G3DSA:3.40.50.300 216 392 3.4E-52 T 14-10-2018 Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 SUPERFAMILY SSF52540 227 439 1.7E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0001 d50b72caebbe28701fc17a93a13d5b2b 577 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 9 563 32.553 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Amir_1872 65dd107628e0f1ad1373874db80bd85c 980 Gene3D G3DSA:3.20.20.80 387 662 8.5E-45 T 14-10-2018 Amir_1872 65dd107628e0f1ad1373874db80bd85c 980 Gene3D G3DSA:2.60.40.10 289 377 2.1E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_1872 65dd107628e0f1ad1373874db80bd85c 980 SUPERFAMILY SSF51445 373 657 9.29E-55 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1872 65dd107628e0f1ad1373874db80bd85c 980 Pfam PF00703 Glycosyl hydrolases family 2 325 376 2.2E-6 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Amir_1872 65dd107628e0f1ad1373874db80bd85c 980 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 165 283 4.9E-17 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_1872 65dd107628e0f1ad1373874db80bd85c 980 SUPERFAMILY SSF110221 822 979 2.48E-46 T 14-10-2018 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily GO:0046373|GO:0046556 Amir_1872 65dd107628e0f1ad1373874db80bd85c 980 SUPERFAMILY SSF49303 291 377 1.32E-10 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Amir_1872 65dd107628e0f1ad1373874db80bd85c 980 Pfam PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain 678 816 6.2E-48 T 14-10-2018 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain GO:0046373|GO:0046556 Amir_1872 65dd107628e0f1ad1373874db80bd85c 980 Pfam PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain 835 973 2.2E-46 T 14-10-2018 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain GO:0046373|GO:0046556 Amir_1872 65dd107628e0f1ad1373874db80bd85c 980 SUPERFAMILY SSF110221 669 817 5.23E-47 T 14-10-2018 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily GO:0046373|GO:0046556 Amir_1872 65dd107628e0f1ad1373874db80bd85c 980 Gene3D G3DSA:2.60.120.260 119 286 7.8E-40 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_1872 65dd107628e0f1ad1373874db80bd85c 980 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 419 530 1.2E-4 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Amir_1872 65dd107628e0f1ad1373874db80bd85c 980 Gene3D G3DSA:2.80.10.50 822 980 6.7E-54 T 14-10-2018 Amir_1872 65dd107628e0f1ad1373874db80bd85c 980 Gene3D G3DSA:2.80.10.50 664 821 3.4E-55 T 14-10-2018 Amir_1872 65dd107628e0f1ad1373874db80bd85c 980 SUPERFAMILY SSF49785 119 286 2.19E-49 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 SUPERFAMILY SSF55048 743 797 6.41E-5 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1483 1656 1.8E-9 T 14-10-2018 Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 SMART SM00823 Phosphopantetheine attachment site 11 82 2.0E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 SMART SM00823 Phosphopantetheine attachment site 1740 1811 1.0E-11 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 98 343 1.7E-83 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 Pfam PF00550 Phosphopantetheine attachment site 1743 1807 9.8E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 Pfam PF00550 Phosphopantetheine attachment site 13 78 2.9E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 SMART SM00826 984 1142 1.7E-15 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 Pfam PF08659 KR domain 1483 1640 9.0E-28 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 SMART SM00825 Beta-ketoacyl synthase 100 521 9.1E-188 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 Gene3D G3DSA:3.30.70.3290 538 961 3.7E-118 T 14-10-2018 Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 SUPERFAMILY SSF47336 1733 1810 3.8E-15 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 Gene3D G3DSA:1.10.1200.10 1733 1814 1.6E-15 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 Gene3D G3DSA:3.10.129.110 985 1242 1.1E-31 T 14-10-2018 Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 SUPERFAMILY SSF53901 96 517 2.81E-91 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 Pfam PF00698 Acyl transferase domain 621 921 1.5E-68 T 14-10-2018 IPR014043 Acyl transferase Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 SUPERFAMILY SSF52151 621 904 3.92E-60 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 Gene3D G3DSA:3.40.50.720 1250 1721 7.3E-72 T 14-10-2018 Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 623 916 3.8E-82 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 Gene3D G3DSA:1.10.1200.10 1 82 1.5E-18 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 Gene3D G3DSA:3.40.366.10 621 919 3.7E-118 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 SUPERFAMILY SSF47336 5 113 2.49E-12 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 SUPERFAMILY SSF51735 1483 1694 1.17E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 351 468 1.3E-38 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 471 582 8.5E-14 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 SUPERFAMILY SSF51735 1285 1471 4.33E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 Gene3D G3DSA:3.40.47.10 91 537 2.3E-177 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 Pfam PF14765 Polyketide synthase dehydratase 985 1241 1.4E-26 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4853 3216a539749f4ce1fa123a2b639787ba 1819 SMART SM01294 1741 1807 0.0015 T 14-10-2018 Amir_0154 41aa1be060cbbda3b228d87c1f574298 271 Pfam PF00144 Beta-lactamase 16 263 4.6E-33 T 14-10-2018 IPR001466 Beta-lactamase-related Amir_0154 41aa1be060cbbda3b228d87c1f574298 271 Gene3D G3DSA:3.40.710.10 2 271 1.7E-73 T 14-10-2018 Amir_0154 41aa1be060cbbda3b228d87c1f574298 271 SUPERFAMILY SSF56601 8 262 2.35E-52 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_0253 2953e0c0c295fa62dc3ae589e4859e0c 224 Pfam PF13545 Crp-like helix-turn-helix domain 148 221 1.0E-18 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amir_0253 2953e0c0c295fa62dc3ae589e4859e0c 224 Gene3D G3DSA:1.10.10.10 147 224 2.7E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0253 2953e0c0c295fa62dc3ae589e4859e0c 224 SUPERFAMILY SSF46785 145 223 4.21E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0253 2953e0c0c295fa62dc3ae589e4859e0c 224 PRINTS PR00103 cAMP-dependent protein kinase signature 76 85 8.7E-5 T 14-10-2018 Amir_0253 2953e0c0c295fa62dc3ae589e4859e0c 224 PRINTS PR00103 cAMP-dependent protein kinase signature 88 99 8.7E-5 T 14-10-2018 Amir_0253 2953e0c0c295fa62dc3ae589e4859e0c 224 PRINTS PR00103 cAMP-dependent protein kinase signature 46 60 8.7E-5 T 14-10-2018 Amir_0253 2953e0c0c295fa62dc3ae589e4859e0c 224 PRINTS PR00103 cAMP-dependent protein kinase signature 31 45 8.7E-5 T 14-10-2018 Amir_0253 2953e0c0c295fa62dc3ae589e4859e0c 224 SMART SM00100 10 128 1.6E-28 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_0253 2953e0c0c295fa62dc3ae589e4859e0c 224 Gene3D G3DSA:2.60.120.10 1 146 3.8E-47 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_0253 2953e0c0c295fa62dc3ae589e4859e0c 224 Pfam PF00027 Cyclic nucleotide-binding domain 29 114 7.6E-25 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_0253 2953e0c0c295fa62dc3ae589e4859e0c 224 SUPERFAMILY SSF51206 4 142 1.83E-37 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Amir_0253 2953e0c0c295fa62dc3ae589e4859e0c 224 SMART SM00419 167 215 2.2E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amir_0763 8e773df2c765a281b0a260efee38b6c7 312 Gene3D G3DSA:1.10.3720.10 90 303 6.0E-28 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0763 8e773df2c765a281b0a260efee38b6c7 312 SUPERFAMILY SSF161098 96 289 1.83E-30 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0763 8e773df2c765a281b0a260efee38b6c7 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 308 7.5E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0763 8e773df2c765a281b0a260efee38b6c7 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 77 5.4E-11 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Amir_0140 edc66b7ebaa2288f428ad5a9d25b5987 210 SUPERFAMILY SSF55729 9 168 2.28E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_0140 edc66b7ebaa2288f428ad5a9d25b5987 210 Pfam PF13302 Acetyltransferase (GNAT) domain 15 162 7.4E-15 T 14-10-2018 IPR000182 GNAT domain Amir_0140 edc66b7ebaa2288f428ad5a9d25b5987 210 Gene3D G3DSA:3.40.630.30 2 210 1.6E-50 T 14-10-2018 Amir_0735 cb6115a7d921705c5d6d29d34553100c 441 Pfam PF02805 Metal binding domain of Ada 8 71 2.4E-27 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 Amir_0735 cb6115a7d921705c5d6d29d34553100c 441 Pfam PF12833 Helix-turn-helix domain 106 184 2.0E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_0735 cb6115a7d921705c5d6d29d34553100c 441 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 137 179 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amir_0735 cb6115a7d921705c5d6d29d34553100c 441 Gene3D G3DSA:3.40.10.10 1 72 5.4E-28 T 14-10-2018 IPR035451 Ada-like domain superfamily Amir_0735 cb6115a7d921705c5d6d29d34553100c 441 SUPERFAMILY SSF46689 137 186 8.51E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0735 cb6115a7d921705c5d6d29d34553100c 441 Gene3D G3DSA:3.30.310.20 196 311 3.2E-29 T 14-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily Amir_0735 cb6115a7d921705c5d6d29d34553100c 441 SUPERFAMILY SSF55945 197 292 1.88E-27 T 14-10-2018 Amir_0735 cb6115a7d921705c5d6d29d34553100c 441 SUPERFAMILY SSF48150 350 418 1.55E-8 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Amir_0735 cb6115a7d921705c5d6d29d34553100c 441 SMART SM00342 100 183 8.5E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_0735 cb6115a7d921705c5d6d29d34553100c 441 SMART SM01009 196 311 1.8E-50 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal Amir_0735 cb6115a7d921705c5d6d29d34553100c 441 SUPERFAMILY SSF57884 2 84 5.23E-30 T 14-10-2018 IPR035451 Ada-like domain superfamily Amir_0735 cb6115a7d921705c5d6d29d34553100c 441 Gene3D G3DSA:1.10.10.60 84 190 1.5E-16 T 14-10-2018 Amir_0735 cb6115a7d921705c5d6d29d34553100c 441 Pfam PF06029 AlkA N-terminal domain 197 311 2.3E-34 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal Amir_4216 938ea507f4807c2bfe38bbbbe8b2f0a6 152 SUPERFAMILY SSF55729 1 136 2.3E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_4216 938ea507f4807c2bfe38bbbbe8b2f0a6 152 Pfam PF00583 Acetyltransferase (GNAT) family 29 133 1.2E-13 T 14-10-2018 IPR000182 GNAT domain Amir_4216 938ea507f4807c2bfe38bbbbe8b2f0a6 152 Gene3D G3DSA:3.40.630.30 1 149 6.5E-34 T 14-10-2018 Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 Pfam PF00990 Diguanylate cyclase, GGDEF domain 240 391 1.3E-37 T 14-10-2018 IPR000160 GGDEF domain Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 SUPERFAMILY SSF141868 411 651 7.06E-69 T 14-10-2018 IPR035919 EAL domain superfamily Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 Gene3D G3DSA:3.20.20.450 404 655 1.6E-74 T 14-10-2018 IPR035919 EAL domain superfamily Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 SUPERFAMILY SSF55073 245 397 4.24E-43 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 239 394 1.3E-37 T 14-10-2018 IPR000160 GGDEF domain Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 SMART SM00267 229 395 6.4E-55 T 14-10-2018 IPR000160 GGDEF domain Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 Pfam PF13426 PAS domain 19 61 0.48 T 14-10-2018 IPR000014 PAS domain Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 SUPERFAMILY SSF55785 124 231 2.09E-16 T 14-10-2018 IPR035965 PAS domain superfamily Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 Pfam PF08447 PAS fold 136 223 1.5E-11 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 Gene3D G3DSA:3.30.450.20 3 108 3.7E-5 T 14-10-2018 Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 Gene3D G3DSA:2.10.70.100 183 229 3.1E-6 T 14-10-2018 Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 SMART SM00052 405 648 2.1E-68 T 14-10-2018 IPR001633 EAL domain Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 SMART SM00086 186 229 0.0087 T 14-10-2018 IPR001610 PAC motif Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 SUPERFAMILY SSF55785 5 95 6.77E-8 T 14-10-2018 IPR035965 PAS domain superfamily Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 SMART SM00091 4 69 0.022 T 14-10-2018 IPR000014 PAS domain Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 SMART SM00091 113 180 12.0 T 14-10-2018 IPR000014 PAS domain Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 Gene3D G3DSA:3.30.450.20 110 180 2.0E-16 T 14-10-2018 Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 Pfam PF00563 EAL domain 412 643 5.4E-61 T 14-10-2018 IPR001633 EAL domain Amir_3414 caef95db32f6ed13b795a7aa2e18086d 673 Gene3D G3DSA:3.30.70.270 230 397 5.3E-50 T 14-10-2018 Amir_0947 ad321dec41ffcd5f00f44d09e329338d 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 10 133 5.0E-51 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Amir_0947 ad321dec41ffcd5f00f44d09e329338d 161 ProSitePatterns PS01317 SsrA-binding protein. 28 40 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site Amir_0947 ad321dec41ffcd5f00f44d09e329338d 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 149 2.3E-57 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Amir_0947 ad321dec41ffcd5f00f44d09e329338d 161 Gene3D G3DSA:2.40.280.10 3 129 3.6E-49 T 14-10-2018 IPR023620 Small protein B Amir_0947 ad321dec41ffcd5f00f44d09e329338d 161 Pfam PF01668 SmpB protein 10 149 2.4E-60 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Amir_0947 ad321dec41ffcd5f00f44d09e329338d 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 156 71.884 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Amir_0947 ad321dec41ffcd5f00f44d09e329338d 161 SUPERFAMILY SSF74982 4 133 2.75E-52 T 14-10-2018 IPR023620 Small protein B Amir_2900 76df0002c516a566eed62b441d18f560 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 66 5.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2900 76df0002c516a566eed62b441d18f560 201 SUPERFAMILY SSF46689 9 81 2.27E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2900 76df0002c516a566eed62b441d18f560 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 5.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2900 76df0002c516a566eed62b441d18f560 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 5.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2900 76df0002c516a566eed62b441d18f560 201 Pfam PF13305 WHG domain 93 169 2.5E-12 T 14-10-2018 IPR025996 WHG domain Amir_2900 76df0002c516a566eed62b441d18f560 201 Gene3D G3DSA:1.10.357.10 5 194 1.2E-41 T 14-10-2018 Amir_2900 76df0002c516a566eed62b441d18f560 201 SUPERFAMILY SSF48498 94 188 4.22E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_2815 fc610b03f0ab5a148c6590c8e2f17e5c 232 Gene3D G3DSA:3.40.50.150 16 172 6.6E-33 T 14-10-2018 Amir_2815 fc610b03f0ab5a148c6590c8e2f17e5c 232 Pfam PF08241 Methyltransferase domain 49 141 1.3E-20 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_2815 fc610b03f0ab5a148c6590c8e2f17e5c 232 SUPERFAMILY SSF53335 13 166 5.37E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_4535 62e2cf8bd1871808b5aaa44eea9ea324 419 SUPERFAMILY SSF56059 137 324 1.69E-11 T 14-10-2018 Amir_0492 513f0c56fea453b6fc8faaaf1b14a74c 209 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 91 193 2.1E-33 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amir_0492 513f0c56fea453b6fc8faaaf1b14a74c 209 SUPERFAMILY SSF54719 84 197 7.59E-41 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amir_0492 513f0c56fea453b6fc8faaaf1b14a74c 209 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 160 167 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amir_0492 513f0c56fea453b6fc8faaaf1b14a74c 209 SUPERFAMILY SSF46609 3 88 1.7E-26 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amir_0492 513f0c56fea453b6fc8faaaf1b14a74c 209 Gene3D G3DSA:1.10.287.990 21 84 7.9E-22 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amir_0492 513f0c56fea453b6fc8faaaf1b14a74c 209 PIRSF PIRSF000349 1 203 3.0E-69 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amir_0492 513f0c56fea453b6fc8faaaf1b14a74c 209 PRINTS PR01703 Manganese superoxide dismutase signature 67 80 2.4E-17 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amir_0492 513f0c56fea453b6fc8faaaf1b14a74c 209 PRINTS PR01703 Manganese superoxide dismutase signature 120 128 2.4E-17 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amir_0492 513f0c56fea453b6fc8faaaf1b14a74c 209 PRINTS PR01703 Manganese superoxide dismutase signature 158 170 2.4E-17 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amir_0492 513f0c56fea453b6fc8faaaf1b14a74c 209 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 2.4E-17 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amir_0492 513f0c56fea453b6fc8faaaf1b14a74c 209 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 2.4E-17 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amir_0492 513f0c56fea453b6fc8faaaf1b14a74c 209 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 84 1.9E-25 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amir_0492 513f0c56fea453b6fc8faaaf1b14a74c 209 Gene3D G3DSA:2.40.500.20 85 206 8.1E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amir_5660 e579844754d5cf7b59b304d0f4231959 365 Gene3D G3DSA:3.30.1360.120 5 236 1.3E-88 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Amir_5660 e579844754d5cf7b59b304d0f4231959 365 SUPERFAMILY SSF103025 3 281 3.92E-97 T 14-10-2018 Amir_5660 e579844754d5cf7b59b304d0f4231959 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 8 258 9.2E-93 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Amir_5660 e579844754d5cf7b59b304d0f4231959 365 Gene3D G3DSA:4.10.1250.10 238 279 2.3E-15 T 14-10-2018 Amir_5660 e579844754d5cf7b59b304d0f4231959 365 SUPERFAMILY SSF101790 277 364 4.41E-25 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Amir_5660 e579844754d5cf7b59b304d0f4231959 365 Gene3D G3DSA:2.40.30.110 281 364 3.5E-30 T 14-10-2018 Amir_5660 e579844754d5cf7b59b304d0f4231959 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 2 364 43.769 T 14-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Amir_5660 e579844754d5cf7b59b304d0f4231959 365 Gene3D G3DSA:3.30.70.1400 52 138 1.3E-88 T 14-10-2018 Amir_5660 e579844754d5cf7b59b304d0f4231959 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 364 4.5E-109 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Amir_5660 e579844754d5cf7b59b304d0f4231959 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 358 1.0E-25 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Amir_5660 e579844754d5cf7b59b304d0f4231959 365 PIRSF PIRSF006487 1 365 1.6E-101 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 SUPERFAMILY SSF48264 6 405 2.23E-94 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 PRINTS PR00359 B-class P450 signature 296 323 5.5E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 PRINTS PR00359 B-class P450 signature 148 164 5.5E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 PRINTS PR00359 B-class P450 signature 324 339 5.5E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 PRINTS PR00359 B-class P450 signature 165 180 5.5E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 PRINTS PR00359 B-class P450 signature 354 365 5.5E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 PRINTS PR00359 B-class P450 signature 101 112 5.5E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 PRINTS PR00359 B-class P450 signature 202 224 5.5E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 PRINTS PR00359 B-class P450 signature 345 354 5.5E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 PRINTS PR00359 B-class P450 signature 279 290 5.5E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 Gene3D G3DSA:1.10.630.10 18 409 6.4E-120 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 347 356 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 Pfam PF00067 Cytochrome P450 226 375 7.4E-23 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 PRINTS PR00385 P450 superfamily signature 244 261 9.6E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 PRINTS PR00385 P450 superfamily signature 354 365 9.6E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 PRINTS PR00385 P450 superfamily signature 279 290 9.6E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3146 367ce45a3d810320d9b3773ca22d9fbb 410 PRINTS PR00385 P450 superfamily signature 345 354 9.6E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3416 0a2dfb3c8702eadf34ecbf4d07ec35d5 151 SUPERFAMILY SSF50475 14 139 3.04E-27 T 14-10-2018 Amir_3416 0a2dfb3c8702eadf34ecbf4d07ec35d5 151 Gene3D G3DSA:2.30.110.10 8 141 3.2E-33 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_3416 0a2dfb3c8702eadf34ecbf4d07ec35d5 151 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 95 8.3E-12 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amir_3416 0a2dfb3c8702eadf34ecbf4d07ec35d5 151 TIGRFAM TIGR03618 Rv1155_F420: PPOX class probable F420-dependent enzyme 16 140 4.6E-36 T 14-10-2018 IPR019920 F420-binding domain, putative Amir_2280 aae389defd1961a862c790322224d4ec 680 Gene3D G3DSA:3.30.565.10 5 237 4.7E-73 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2280 aae389defd1961a862c790322224d4ec 680 SMART SM00387 32 171 2.1E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2280 aae389defd1961a862c790322224d4ec 680 Gene3D G3DSA:3.40.50.670 437 679 5.9E-84 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amir_2280 aae389defd1961a862c790322224d4ec 680 Gene3D G3DSA:3.30.230.10 238 436 2.4E-44 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amir_2280 aae389defd1961a862c790322224d4ec 680 SUPERFAMILY SSF54211 239 428 9.67E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_2280 aae389defd1961a862c790322224d4ec 680 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 610 666 2.3E-22 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_2280 aae389defd1961a862c790322224d4ec 680 ProSitePatterns PS00177 DNA topoisomerase II signature. 460 468 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amir_2280 aae389defd1961a862c790322224d4ec 680 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 137 5.1E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2280 aae389defd1961a862c790322224d4ec 680 SMART SM00433 36 671 1.2E-205 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amir_2280 aae389defd1961a862c790322224d4ec 680 SUPERFAMILY SSF56719 432 668 1.26E-72 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Amir_2280 aae389defd1961a862c790322224d4ec 680 SUPERFAMILY SSF55874 7 222 4.88E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2280 aae389defd1961a862c790322224d4ec 680 Pfam PF01751 Toprim domain 457 557 1.5E-12 T 14-10-2018 IPR006171 TOPRIM domain Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR00418 DNA topoisomerase II family signature 524 540 6.7E-58 T 14-10-2018 Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR00418 DNA topoisomerase II family signature 71 84 6.7E-58 T 14-10-2018 Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR00418 DNA topoisomerase II family signature 114 128 6.7E-58 T 14-10-2018 Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR00418 DNA topoisomerase II family signature 458 472 6.7E-58 T 14-10-2018 Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR00418 DNA topoisomerase II family signature 610 626 6.7E-58 T 14-10-2018 Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR00418 DNA topoisomerase II family signature 303 316 6.7E-58 T 14-10-2018 Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR00418 DNA topoisomerase II family signature 562 574 6.7E-58 T 14-10-2018 Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR00418 DNA topoisomerase II family signature 542 559 6.7E-58 T 14-10-2018 Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR00418 DNA topoisomerase II family signature 36 51 6.7E-58 T 14-10-2018 Amir_2280 aae389defd1961a862c790322224d4ec 680 Pfam PF00204 DNA gyrase B 238 428 7.3E-45 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR01159 DNA gyrase subunit B signature 647 663 2.2E-28 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR01159 DNA gyrase subunit B signature 348 364 2.2E-28 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR01159 DNA gyrase subunit B signature 196 211 2.2E-28 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR01159 DNA gyrase subunit B signature 237 259 2.2E-28 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR01159 DNA gyrase subunit B signature 508 517 2.2E-28 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR01159 DNA gyrase subunit B signature 7 17 2.2E-28 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR01159 DNA gyrase subunit B signature 631 643 2.2E-28 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_2280 aae389defd1961a862c790322224d4ec 680 PRINTS PR01159 DNA gyrase subunit B signature 412 432 2.2E-28 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_0906 3ee6165824cfe783d5ca3bc74cdad287 1094 Pfam PF01336 OB-fold nucleic acid binding domain 657 730 2.3E-11 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Amir_0906 3ee6165824cfe783d5ca3bc74cdad287 1094 Pfam PF16995 Transmembrane region of lysyl-tRNA synthetase 12 231 3.9E-30 T 14-10-2018 IPR031553 Lysyl-tRNA synthetase, N-terminal transmembrane region KEGG: 00970+6.1.1.6 Amir_0906 3ee6165824cfe783d5ca3bc74cdad287 1094 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 620 1093 35.307 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_0906 3ee6165824cfe783d5ca3bc74cdad287 1094 Pfam PF00152 tRNA synthetases class II (D, K and N) 750 1087 7.2E-72 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_0906 3ee6165824cfe783d5ca3bc74cdad287 1094 SUPERFAMILY SSF50249 614 742 4.93E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_0906 3ee6165824cfe783d5ca3bc74cdad287 1094 SUPERFAMILY SSF55681 749 1089 4.4E-101 T 14-10-2018 Amir_0906 3ee6165824cfe783d5ca3bc74cdad287 1094 PRINTS PR00982 Lysyl-tRNA synthetase signature 974 990 5.8E-31 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_0906 3ee6165824cfe783d5ca3bc74cdad287 1094 PRINTS PR00982 Lysyl-tRNA synthetase signature 831 844 5.8E-31 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_0906 3ee6165824cfe783d5ca3bc74cdad287 1094 PRINTS PR00982 Lysyl-tRNA synthetase signature 802 818 5.8E-31 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_0906 3ee6165824cfe783d5ca3bc74cdad287 1094 PRINTS PR00982 Lysyl-tRNA synthetase signature 786 796 5.8E-31 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_0906 3ee6165824cfe783d5ca3bc74cdad287 1094 PRINTS PR00982 Lysyl-tRNA synthetase signature 849 866 5.8E-31 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_0906 3ee6165824cfe783d5ca3bc74cdad287 1094 Gene3D G3DSA:3.30.930.10 745 1094 2.7E-113 T 14-10-2018 Amir_0906 3ee6165824cfe783d5ca3bc74cdad287 1094 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 617 1090 6.0E-142 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_0906 3ee6165824cfe783d5ca3bc74cdad287 1094 Gene3D G3DSA:2.40.50.140 608 743 8.9E-32 T 14-10-2018 Amir_0906 3ee6165824cfe783d5ca3bc74cdad287 1094 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 250 549 7.2E-100 T 14-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Gene3D G3DSA:3.40.50.720 2284 2734 8.4E-103 T 14-10-2018 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SUPERFAMILY SSF51735 2476 2718 4.55E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SUPERFAMILY SSF52151 1642 1933 2.28E-66 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 381 439 2.7E-10 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3228 3336 2.0E-15 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1492 1607 5.3E-13 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF14765 Polyketide synthase dehydratase 2007 2282 1.8E-56 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SMART SM00825 Beta-ketoacyl synthase 2854 3278 3.2E-225 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SMART SM00825 Beta-ketoacyl synthase 19 431 4.6E-178 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SMART SM00825 Beta-ketoacyl synthase 1118 1542 6.6E-226 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Gene3D G3DSA:3.40.47.10 14 472 1.5E-175 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 3015 3031 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2852 3102 1.5E-92 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 18 255 1.1E-76 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1116 1366 2.0E-91 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Gene3D G3DSA:3.40.47.10 2843 3288 1.4E-191 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Gene3D G3DSA:3.40.47.10 1109 1557 8.6E-192 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SUPERFAMILY SSF47336 3912 4002 9.68E-22 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SUPERFAMILY SSF53901 1113 1487 3.49E-105 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Gene3D G3DSA:3.10.129.110 1996 2283 1.0E-102 T 14-10-2018 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Gene3D G3DSA:3.30.70.3290 3292 3715 5.9E-153 T 14-10-2018 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SUPERFAMILY SSF55048 759 824 2.62E-13 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SUPERFAMILY SSF52151 3370 3653 8.11E-69 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SUPERFAMILY SSF55048 1767 1831 1.23E-11 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Gene3D G3DSA:3.40.366.10 634 937 2.7E-158 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Gene3D G3DSA:3.40.366.10 3372 3672 5.9E-153 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Gene3D G3DSA:3.40.366.10 1644 1944 2.5E-157 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SUPERFAMILY SSF52151 633 921 3.92E-67 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2478 2652 1.2E-39 T 14-10-2018 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1646 1941 2.7E-109 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 636 934 5.0E-118 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 3374 3669 4.7E-113 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SUPERFAMILY SSF47336 2755 2867 1.57E-23 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1279 1295 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF08659 KR domain 2478 2651 2.1E-47 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Gene3D G3DSA:3.40.50.11460 3729 3890 2.0E-11 T 14-10-2018 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Gene3D G3DSA:1.10.1200.10 2739 2833 1.9E-33 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Gene3D G3DSA:1.10.1200.10 3900 3992 1.6E-29 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Gene3D G3DSA:1.10.1200.10 1006 1099 2.9E-30 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SMART SM00823 Phosphopantetheine attachment site 3920 3992 4.7E-28 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SMART SM00823 Phosphopantetheine attachment site 1026 1098 9.2E-24 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SMART SM00823 Phosphopantetheine attachment site 2760 2832 1.2E-30 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SMART SM01294 2761 2828 9.0E-5 T 14-10-2018 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SMART SM01294 3922 3988 8.1E-6 T 14-10-2018 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SMART SM01294 1027 1094 2.2E-5 T 14-10-2018 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SMART SM00826 2007 2166 1.3E-72 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SUPERFAMILY SSF53901 16 378 4.83E-84 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2787 2802 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3110 3225 9.9E-43 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1374 1489 1.2E-42 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 263 378 3.0E-37 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SUPERFAMILY SSF55048 3495 3559 8.11E-11 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Gene3D G3DSA:3.30.70.3290 1560 1989 2.5E-157 T 14-10-2018 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Gene3D G3DSA:3.30.70.3290 551 980 2.7E-158 T 14-10-2018 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF00550 Phosphopantetheine attachment site 2762 2828 9.1E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF00550 Phosphopantetheine attachment site 1029 1094 9.8E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF00550 Phosphopantetheine attachment site 3922 3988 1.0E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SUPERFAMILY SSF51735 2288 2466 2.79E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SUPERFAMILY SSF53901 2848 3224 4.27E-106 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 SUPERFAMILY SSF47336 1021 1131 1.31E-21 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3947 3962 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF00698 Acyl transferase domain 1645 1960 1.5E-54 T 14-10-2018 IPR014043 Acyl transferase Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF00698 Acyl transferase domain 635 951 5.0E-88 T 14-10-2018 IPR014043 Acyl transferase Amir_4699 e26a44e3ff35f455f400898e7425cc58 4080 Pfam PF00698 Acyl transferase domain 3374 3688 4.4E-56 T 14-10-2018 IPR014043 Acyl transferase Amir_2011 b291494b15c687cbc0fc4ceb43f3d35e 293 Gene3D G3DSA:2.40.10.10 188 293 5.2E-32 T 14-10-2018 Amir_2011 b291494b15c687cbc0fc4ceb43f3d35e 293 Gene3D G3DSA:2.40.10.10 79 187 1.6E-36 T 14-10-2018 Amir_2011 b291494b15c687cbc0fc4ceb43f3d35e 293 SUPERFAMILY SSF50494 72 270 1.47E-15 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_2011 b291494b15c687cbc0fc4ceb43f3d35e 293 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 114 119 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 Amir_2352 75eeae509a0caacfd62db7828d89fb45 132 SUPERFAMILY SSF101116 6 120 3.66E-25 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Amir_2352 75eeae509a0caacfd62db7828d89fb45 132 Pfam PF02561 Flagellar protein FliS 9 119 2.1E-27 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Amir_2352 75eeae509a0caacfd62db7828d89fb45 132 Gene3D G3DSA:1.20.120.340 1 121 2.1E-25 T 14-10-2018 Amir_2352 75eeae509a0caacfd62db7828d89fb45 132 TIGRFAM TIGR00208 fliS: flagellar protein FliS 9 120 3.9E-19 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Amir_4691 51eb18c1c94bbf3ddd65b8f654242ba6 383 Gene3D G3DSA:3.40.710.10 44 381 1.7E-86 T 14-10-2018 Amir_4691 51eb18c1c94bbf3ddd65b8f654242ba6 383 SUPERFAMILY SSF56601 20 366 1.94E-67 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_4691 51eb18c1c94bbf3ddd65b8f654242ba6 383 Pfam PF00144 Beta-lactamase 53 371 9.6E-51 T 14-10-2018 IPR001466 Beta-lactamase-related Amir_6707 1c3d71b60d53b796140a608513f5a9a8 99 Pfam PF14012 Protein of unknown function (DUF4229) 11 71 9.5E-14 T 14-10-2018 IPR025323 Protein of unknown function DUF4229 Amir_2615 705462d20e44cbd66f9b6e34c466bf3c 216 Gene3D G3DSA:1.10.357.10 12 205 1.3E-46 T 14-10-2018 Amir_2615 705462d20e44cbd66f9b6e34c466bf3c 216 SUPERFAMILY SSF46689 14 84 2.6E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2615 705462d20e44cbd66f9b6e34c466bf3c 216 SUPERFAMILY SSF48498 91 199 1.25E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_2615 705462d20e44cbd66f9b6e34c466bf3c 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 1.2E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2846 c0f1790a31e00a0507d77ab74df08a82 574 SUPERFAMILY SSF52518 377 563 1.27E-45 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_2846 c0f1790a31e00a0507d77ab74df08a82 574 Gene3D G3DSA:3.40.50.970 2 185 3.5E-53 T 14-10-2018 Amir_2846 c0f1790a31e00a0507d77ab74df08a82 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 178 1.8E-48 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Amir_2846 c0f1790a31e00a0507d77ab74df08a82 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 400 546 3.3E-30 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amir_2846 c0f1790a31e00a0507d77ab74df08a82 574 Gene3D G3DSA:3.40.50.1220 194 367 5.3E-41 T 14-10-2018 Amir_2846 c0f1790a31e00a0507d77ab74df08a82 574 Gene3D G3DSA:3.40.50.970 370 560 2.3E-43 T 14-10-2018 Amir_2846 c0f1790a31e00a0507d77ab74df08a82 574 SUPERFAMILY SSF52518 7 187 1.22E-49 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_2846 c0f1790a31e00a0507d77ab74df08a82 574 SUPERFAMILY SSF52467 162 354 2.55E-37 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amir_2846 c0f1790a31e00a0507d77ab74df08a82 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 336 4.3E-29 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Amir_4987 a3dff2388a8e69805a4c997ff9959319 285 SUPERFAMILY SSF47413 13 68 8.3E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_4987 a3dff2388a8e69805a4c997ff9959319 285 Gene3D G3DSA:1.10.260.40 10 83 5.1E-10 T 14-10-2018 Amir_4987 a3dff2388a8e69805a4c997ff9959319 285 Pfam PF13560 Helix-turn-helix domain 14 72 1.4E-13 T 14-10-2018 Amir_4987 a3dff2388a8e69805a4c997ff9959319 285 SMART SM00530 17 72 3.9E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_6185 22f71dba28d76736f4adebaa407b3120 285 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 224 256 1.1E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_6185 22f71dba28d76736f4adebaa407b3120 285 Gene3D G3DSA:3.40.50.300 3 280 2.6E-76 T 14-10-2018 Amir_6185 22f71dba28d76736f4adebaa407b3120 285 SUPERFAMILY SSF52540 11 243 1.92E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6185 22f71dba28d76736f4adebaa407b3120 285 SMART SM00382 36 222 6.9E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6185 22f71dba28d76736f4adebaa407b3120 285 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_6185 22f71dba28d76736f4adebaa407b3120 285 Pfam PF00005 ABC transporter 28 172 5.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0770 7574b6af8c8127da0dec8c74a8bc7e59 108 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.8E-17 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Amir_0770 7574b6af8c8127da0dec8c74a8bc7e59 108 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.8E-17 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Amir_0770 7574b6af8c8127da0dec8c74a8bc7e59 108 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.8E-17 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Amir_0770 7574b6af8c8127da0dec8c74a8bc7e59 108 SUPERFAMILY SSF54862 3 85 1.51E-21 T 14-10-2018 Amir_0770 7574b6af8c8127da0dec8c74a8bc7e59 108 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amir_0770 7574b6af8c8127da0dec8c74a8bc7e59 108 Pfam PF00037 4Fe-4S binding domain 34 56 1.2E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amir_0770 7574b6af8c8127da0dec8c74a8bc7e59 108 Gene3D G3DSA:3.30.70.20 2 106 2.6E-46 T 14-10-2018 Amir_0808 3d5bcde5674a0a78656ef615a089d30b 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 305 1.2E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0808 3d5bcde5674a0a78656ef615a089d30b 318 SUPERFAMILY SSF161098 33 306 4.11E-48 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0808 3d5bcde5674a0a78656ef615a089d30b 318 Gene3D G3DSA:1.10.3720.10 26 305 9.3E-53 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0709 678f1940a8c02645861ebc1a20710a59 293 Pfam PF02585 GlcNAc-PI de-N-acetylase 8 153 1.3E-27 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 Amir_0709 678f1940a8c02645861ebc1a20710a59 293 Hamap MF_01482 Mycothiol S-conjugate amidase [mca]. 8 288 55.47 T 14-10-2018 IPR017811 Mycothiol S-conjugate amidase Mca GO:0010126 Amir_0709 678f1940a8c02645861ebc1a20710a59 293 Gene3D G3DSA:3.40.50.10320 1 292 8.4E-83 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Amir_0709 678f1940a8c02645861ebc1a20710a59 293 TIGRFAM TIGR03446 mycothiol_Mca: mycothiol conjugate amidase Mca 5 287 1.1E-153 T 14-10-2018 IPR017811 Mycothiol S-conjugate amidase Mca GO:0010126 Amir_0709 678f1940a8c02645861ebc1a20710a59 293 SUPERFAMILY SSF102588 4 288 4.84E-78 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SUPERFAMILY SSF53901 31 409 1.34E-97 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3277 3292 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SUPERFAMILY SSF51735 1200 1378 3.58E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Gene3D G3DSA:3.40.47.10 1746 2196 2.6E-183 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Gene3D G3DSA:3.40.47.10 25 472 2.3E-184 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Pfam PF00550 Phosphopantetheine attachment site 3252 3317 9.1E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Pfam PF00550 Phosphopantetheine attachment site 1665 1731 1.9E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SUPERFAMILY SSF55048 686 747 3.14E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Gene3D G3DSA:3.30.70.3290 483 903 5.2E-154 T 14-10-2018 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SMART SM00825 Beta-ketoacyl synthase 1756 2180 1.1E-219 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SMART SM00825 Beta-ketoacyl synthase 36 462 1.5E-215 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 34 284 1.3E-86 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1754 2004 2.1E-89 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SUPERFAMILY SSF51735 2959 3209 2.0E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Pfam PF08659 KR domain 1389 1560 6.6E-48 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Pfam PF08659 KR domain 2963 3141 7.1E-54 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SMART SM00826 922 1087 2.2E-72 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SUPERFAMILY SSF51735 2775 2951 1.23E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Gene3D G3DSA:3.10.129.110 911 1198 4.0E-98 T 14-10-2018 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 197 213 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SUPERFAMILY SSF53901 1751 2126 2.53E-98 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Gene3D G3DSA:1.10.1200.10 1646 1737 1.1E-35 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Gene3D G3DSA:1.10.1200.10 3232 3325 2.2E-33 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 2279 2572 5.3E-111 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 563 855 1.1E-111 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SMART SM01294 1664 1731 1.3E-5 T 14-10-2018 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SMART SM01294 3251 3318 2.2E-5 T 14-10-2018 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SUPERFAMILY SSF47336 3245 3330 2.49E-20 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SUPERFAMILY SSF55048 2402 2461 1.19E-6 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1917 1933 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Gene3D G3DSA:3.40.50.720 1204 1641 2.5E-108 T 14-10-2018 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Gene3D G3DSA:3.40.50.720 2767 3220 5.9E-128 T 14-10-2018 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 292 409 2.0E-43 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2012 2127 3.7E-41 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SUPERFAMILY SSF47336 1657 1769 2.49E-25 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Pfam PF08990 Erythronolide synthase docking 2 27 7.2E-11 T 14-10-2018 IPR015083 Polyketide synthase, docking domain GO:0016740|GO:0048037 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SUPERFAMILY SSF52151 560 847 4.97E-67 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Gene3D G3DSA:3.40.50.720 2631 2746 4.9E-13 T 14-10-2018 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Gene3D G3DSA:3.30.70.3290 2197 2617 3.8E-153 T 14-10-2018 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1690 1705 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SUPERFAMILY SSF52151 2275 2558 4.71E-68 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 412 532 1.9E-16 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2130 2240 3.3E-13 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Gene3D G3DSA:3.40.366.10 561 858 5.2E-154 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Gene3D G3DSA:3.40.366.10 2277 2575 3.8E-153 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2963 3143 8.9E-45 T 14-10-2018 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1388 1561 1.4E-41 T 14-10-2018 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Pfam PF14765 Polyketide synthase dehydratase 922 1192 2.3E-51 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SMART SM00823 Phosphopantetheine attachment site 3250 3322 3.3E-28 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SMART SM00823 Phosphopantetheine attachment site 1663 1735 8.2E-32 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 SUPERFAMILY SSF51735 1389 1574 3.24E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Pfam PF00698 Acyl transferase domain 561 874 1.3E-79 T 14-10-2018 IPR014043 Acyl transferase Amir_3293 e8f808c7a45da62f6fd6b5a06388e02a 3408 Pfam PF00698 Acyl transferase domain 2277 2591 6.4E-77 T 14-10-2018 IPR014043 Acyl transferase Amir_6649 4115720e8675ab7baccfa544cf4b63b6 871 SUPERFAMILY SSF55073 439 582 2.9E-22 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_6649 4115720e8675ab7baccfa544cf4b63b6 871 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 431 582 3.4E-14 T 14-10-2018 IPR000160 GGDEF domain Amir_6649 4115720e8675ab7baccfa544cf4b63b6 871 SUPERFAMILY SSF55781 288 432 5.23E-13 T 14-10-2018 Amir_6649 4115720e8675ab7baccfa544cf4b63b6 871 Pfam PF01590 GAF domain 289 421 1.3E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_6649 4115720e8675ab7baccfa544cf4b63b6 871 SUPERFAMILY SSF141868 608 854 3.92E-84 T 14-10-2018 IPR035919 EAL domain superfamily Amir_6649 4115720e8675ab7baccfa544cf4b63b6 871 Pfam PF00563 EAL domain 608 841 1.1E-69 T 14-10-2018 IPR001633 EAL domain Amir_6649 4115720e8675ab7baccfa544cf4b63b6 871 SMART SM00267 423 592 8.1E-19 T 14-10-2018 IPR000160 GGDEF domain Amir_6649 4115720e8675ab7baccfa544cf4b63b6 871 Pfam PF00990 Diguanylate cyclase, GGDEF domain 434 584 8.1E-19 T 14-10-2018 IPR000160 GGDEF domain Amir_6649 4115720e8675ab7baccfa544cf4b63b6 871 Gene3D G3DSA:3.20.20.450 604 855 4.6E-93 T 14-10-2018 IPR035919 EAL domain superfamily Amir_6649 4115720e8675ab7baccfa544cf4b63b6 871 Gene3D G3DSA:3.30.450.40 288 432 1.5E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_6649 4115720e8675ab7baccfa544cf4b63b6 871 Gene3D G3DSA:3.30.70.270 436 603 2.9E-30 T 14-10-2018 Amir_6649 4115720e8675ab7baccfa544cf4b63b6 871 SMART SM00065 283 431 7.7E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_6649 4115720e8675ab7baccfa544cf4b63b6 871 SMART SM00052 601 846 6.7E-105 T 14-10-2018 IPR001633 EAL domain Amir_4472 93a1f608261cabf3b74b21db66ce1900 205 SUPERFAMILY SSF48498 85 188 5.93E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4472 93a1f608261cabf3b74b21db66ce1900 205 Gene3D G3DSA:1.10.357.10 1 199 7.6E-42 T 14-10-2018 Amir_4472 93a1f608261cabf3b74b21db66ce1900 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.1E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4472 93a1f608261cabf3b74b21db66ce1900 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.1E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4472 93a1f608261cabf3b74b21db66ce1900 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 63 4.7E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4472 93a1f608261cabf3b74b21db66ce1900 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 61 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_4472 93a1f608261cabf3b74b21db66ce1900 205 SUPERFAMILY SSF46689 8 90 5.99E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 SUPERFAMILY SSF49464 828 914 1.41E-10 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 SUPERFAMILY SSF117074 1699 1793 1.19E-23 T 14-10-2018 Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Gene3D G3DSA:2.60.40.10 597 709 3.8E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 SUPERFAMILY SSF117074 1132 1225 1.05E-10 T 14-10-2018 Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 SUPERFAMILY SSF117074 689 794 1.23E-15 T 14-10-2018 Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 SUPERFAMILY SSF117074 919 999 6.41E-14 T 14-10-2018 Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 SUPERFAMILY SSF117074 1228 1324 6.8E-11 T 14-10-2018 Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Gene3D G3DSA:2.60.40.1120 829 905 3.7E-8 T 14-10-2018 Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 503 537 5.1E-8 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Pfam PF13620 Carboxypeptidase regulatory-like domain 1040 1094 1.9E-8 T 14-10-2018 Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Pfam PF13620 Carboxypeptidase regulatory-like domain 828 894 1.1E-7 T 14-10-2018 Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Gene3D G3DSA:2.60.40.10 1719 1839 2.6E-33 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Gene3D G3DSA:2.60.40.10 1357 1453 3.7E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Gene3D G3DSA:2.60.40.10 1138 1251 6.2E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Gene3D G3DSA:2.60.40.10 710 825 1.4E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Gene3D G3DSA:2.60.40.10 922 1037 2.8E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Gene3D G3DSA:2.60.40.10 1039 1128 1.9E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Gene3D G3DSA:2.60.40.10 1258 1353 1.1E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Gene3D G3DSA:2.60.40.10 1619 1718 7.2E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 SUPERFAMILY SSF49478 1040 1104 8.63E-10 T 14-10-2018 Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 SUPERFAMILY SSF117074 580 672 4.05E-9 T 14-10-2018 Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 SUPERFAMILY SSF117074 1543 1586 8.89E-6 T 14-10-2018 Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 SUPERFAMILY SSF117074 1620 1697 1.06E-13 T 14-10-2018 Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Pfam PF17210 SdrD B-like domain 926 1006 2.4E-14 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Pfam PF17210 SdrD B-like domain 1142 1225 4.2E-13 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Pfam PF17210 SdrD B-like domain 1720 1833 8.4E-33 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Pfam PF17210 SdrD B-like domain 714 794 4.4E-16 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Pfam PF17210 SdrD B-like domain 598 684 9.7E-7 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Pfam PF17210 SdrD B-like domain 1265 1337 1.0E-8 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 Pfam PF17210 SdrD B-like domain 1623 1702 9.5E-13 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1630 1642 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site Amir_0570 a64884119bc788c4eb68e58f9d58c734 2047 SUPERFAMILY SSF117074 1355 1393 4.05E-5 T 14-10-2018 Amir_7088 038b5363a4d1cff692fcd8b807ab6bc2 379 Pfam PF01471 Putative peptidoglycan binding domain 10 66 7.2E-11 T 14-10-2018 IPR002477 Peptidoglycan binding-like Amir_7088 038b5363a4d1cff692fcd8b807ab6bc2 379 Pfam PF01471 Putative peptidoglycan binding domain 87 143 1.0E-16 T 14-10-2018 IPR002477 Peptidoglycan binding-like Amir_7088 038b5363a4d1cff692fcd8b807ab6bc2 379 SUPERFAMILY SSF47090 80 145 1.18E-18 T 14-10-2018 IPR036365 PGBD-like superfamily Amir_7088 038b5363a4d1cff692fcd8b807ab6bc2 379 SMART SM00646 234 349 1.7E-27 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amir_7088 038b5363a4d1cff692fcd8b807ab6bc2 379 Gene3D G3DSA:3.40.630.40 172 354 1.5E-39 T 14-10-2018 Amir_7088 038b5363a4d1cff692fcd8b807ab6bc2 379 SUPERFAMILY SSF53187 173 352 1.6E-41 T 14-10-2018 Amir_7088 038b5363a4d1cff692fcd8b807ab6bc2 379 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 176 349 3.5E-37 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amir_7088 038b5363a4d1cff692fcd8b807ab6bc2 379 Gene3D G3DSA:1.10.101.10 2 71 1.1E-14 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Amir_7088 038b5363a4d1cff692fcd8b807ab6bc2 379 Gene3D G3DSA:1.10.101.10 77 148 2.8E-20 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Amir_7088 038b5363a4d1cff692fcd8b807ab6bc2 379 SUPERFAMILY SSF47090 3 67 1.7E-13 T 14-10-2018 IPR036365 PGBD-like superfamily Amir_4642 1a50e006b47fcac90eb0558fc86d2899 364 SUPERFAMILY SSF53756 2 360 1.61E-50 T 14-10-2018 Amir_4642 1a50e006b47fcac90eb0558fc86d2899 364 Pfam PF13439 Glycosyltransferase Family 4 15 181 8.8E-7 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amir_4642 1a50e006b47fcac90eb0558fc86d2899 364 Gene3D G3DSA:3.40.50.2000 190 343 4.5E-28 T 14-10-2018 Amir_4642 1a50e006b47fcac90eb0558fc86d2899 364 Gene3D G3DSA:3.40.50.2000 1 189 2.8E-10 T 14-10-2018 Amir_4642 1a50e006b47fcac90eb0558fc86d2899 364 Pfam PF00534 Glycosyl transferases group 1 249 340 1.5E-17 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 Gene3D G3DSA:3.40.50.1370 132 293 8.2E-115 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 SUPERFAMILY SSF53671 2 308 3.67E-97 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 Gene3D G3DSA:3.40.50.1370 10 303 8.2E-115 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 259 268 4.6E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 271 294 4.6E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 129 140 4.6E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 47 66 4.6E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 47 54 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 141 4.0E-46 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 285 296 1.0E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 45 59 1.0E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 78 91 1.0E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 222 232 1.0E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 118 132 1.0E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 149 304 1.2E-50 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 307 74.644 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 Amir_5452 00a11f69b08617638eb0ca8878b80adc 310 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 306 9.5E-111 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Amir_1602 e7cf532f87cbb14c65cffb23a5e4f492 180 Gene3D G3DSA:3.30.420.10 1 180 1.1E-37 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amir_1602 e7cf532f87cbb14c65cffb23a5e4f492 180 Pfam PF00929 Exonuclease 9 174 2.8E-13 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Amir_1602 e7cf532f87cbb14c65cffb23a5e4f492 180 SUPERFAMILY SSF53098 4 174 5.9E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_1602 e7cf532f87cbb14c65cffb23a5e4f492 180 SMART SM00479 7 179 6.2E-4 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Amir_5097 ecd11c7ddbdd3ef05c4bcc5ed5f622ec 160 SUPERFAMILY SSF55729 2 130 2.57E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_5097 ecd11c7ddbdd3ef05c4bcc5ed5f622ec 160 Gene3D G3DSA:3.40.630.30 1 139 3.8E-17 T 14-10-2018 Amir_5097 ecd11c7ddbdd3ef05c4bcc5ed5f622ec 160 Pfam PF00583 Acetyltransferase (GNAT) family 50 126 8.0E-8 T 14-10-2018 IPR000182 GNAT domain Amir_5913 4ea11946a78db00d3d56b21e12aeab8c 272 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 40 266 1.2E-80 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Amir_5913 4ea11946a78db00d3d56b21e12aeab8c 272 Gene3D G3DSA:1.20.140.160 111 270 1.9E-44 T 14-10-2018 Amir_5913 4ea11946a78db00d3d56b21e12aeab8c 272 Pfam PF04545 Sigma-70, region 4 215 263 1.0E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amir_5913 4ea11946a78db00d3d56b21e12aeab8c 272 Pfam PF04542 Sigma-70 region 2 40 112 9.2E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5913 4ea11946a78db00d3d56b21e12aeab8c 272 SUPERFAMILY SSF88659 183 268 1.42E-21 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5913 4ea11946a78db00d3d56b21e12aeab8c 272 PIRSF PIRSF000770 15 272 2.8E-57 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_5913 4ea11946a78db00d3d56b21e12aeab8c 272 SUPERFAMILY SSF88946 13 112 4.87E-28 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5913 4ea11946a78db00d3d56b21e12aeab8c 272 SUPERFAMILY SSF88659 113 177 5.23E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5913 4ea11946a78db00d3d56b21e12aeab8c 272 Gene3D G3DSA:1.10.1740.10 23 109 1.3E-30 T 14-10-2018 Amir_5913 4ea11946a78db00d3d56b21e12aeab8c 272 PRINTS PR00046 Major sigma-70 factor signature 67 80 1.1E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_5913 4ea11946a78db00d3d56b21e12aeab8c 272 PRINTS PR00046 Major sigma-70 factor signature 251 262 1.1E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_5913 4ea11946a78db00d3d56b21e12aeab8c 272 PRINTS PR00046 Major sigma-70 factor signature 236 251 1.1E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_5913 4ea11946a78db00d3d56b21e12aeab8c 272 PRINTS PR00046 Major sigma-70 factor signature 219 231 1.1E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_5913 4ea11946a78db00d3d56b21e12aeab8c 272 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 37 265 2.3E-34 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_5913 4ea11946a78db00d3d56b21e12aeab8c 272 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 67 80 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_5913 4ea11946a78db00d3d56b21e12aeab8c 272 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 236 262 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_5117 9e7aec6a3be9bc9b4db1e165efb67f45 320 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 Amir_5117 9e7aec6a3be9bc9b4db1e165efb67f45 320 Gene3D G3DSA:3.40.50.2300 73 289 6.1E-32 T 14-10-2018 Amir_5117 9e7aec6a3be9bc9b4db1e165efb67f45 320 SMART SM00354 1 71 5.8E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_5117 9e7aec6a3be9bc9b4db1e165efb67f45 320 Gene3D G3DSA:1.10.260.40 1 58 8.5E-17 T 14-10-2018 Amir_5117 9e7aec6a3be9bc9b4db1e165efb67f45 320 SUPERFAMILY SSF53822 72 288 1.69E-31 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_5117 9e7aec6a3be9bc9b4db1e165efb67f45 320 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 46 8.5E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_5117 9e7aec6a3be9bc9b4db1e165efb67f45 320 SUPERFAMILY SSF47413 1 58 3.38E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_5117 9e7aec6a3be9bc9b4db1e165efb67f45 320 Gene3D G3DSA:3.40.50.2300 147 263 6.1E-32 T 14-10-2018 Amir_5117 9e7aec6a3be9bc9b4db1e165efb67f45 320 Pfam PF13377 Periplasmic binding protein-like domain 154 305 2.2E-16 T 14-10-2018 Amir_1434 fb80d568873c80f24f5a5539132e8913 235 Gene3D G3DSA:1.10.10.10 30 95 6.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1434 fb80d568873c80f24f5a5539132e8913 235 SUPERFAMILY SSF46785 30 96 1.41E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1434 fb80d568873c80f24f5a5539132e8913 235 Pfam PF00717 Peptidase S24-like 153 219 1.5E-13 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Amir_1434 fb80d568873c80f24f5a5539132e8913 235 Gene3D G3DSA:2.10.109.10 119 235 5.8E-40 T 14-10-2018 Amir_1434 fb80d568873c80f24f5a5539132e8913 235 SUPERFAMILY SSF51306 114 233 1.69E-33 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Amir_1434 fb80d568873c80f24f5a5539132e8913 235 Hamap MF_00015 LexA repressor [lexA]. 30 235 33.554 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Amir_1434 fb80d568873c80f24f5a5539132e8913 235 TIGRFAM TIGR00498 lexA: repressor LexA 30 234 8.7E-75 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Amir_1434 fb80d568873c80f24f5a5539132e8913 235 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 189 201 1.0E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Amir_1434 fb80d568873c80f24f5a5539132e8913 235 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 160 1.0E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Amir_1434 fb80d568873c80f24f5a5539132e8913 235 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 161 172 1.0E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Amir_1434 fb80d568873c80f24f5a5539132e8913 235 Pfam PF01726 LexA DNA binding domain 30 92 1.6E-27 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 Amir_1101 a9d9c6630dc87c3eee5a56a17e97808b 438 SUPERFAMILY SSF140931 164 357 5.23E-42 T 14-10-2018 IPR036597 Fido-like domain superfamily Amir_1101 a9d9c6630dc87c3eee5a56a17e97808b 438 Pfam PF13784 Fic/DOC family N-terminal 100 179 6.2E-27 T 14-10-2018 IPR025758 Fic/DOC N-terminal Amir_1101 a9d9c6630dc87c3eee5a56a17e97808b 438 Pfam PF11972 HTH DNA binding domain 374 413 5.0E-7 T 14-10-2018 IPR021068 HTH DNA binding domain Amir_1101 a9d9c6630dc87c3eee5a56a17e97808b 438 Gene3D G3DSA:1.10.3290.10 120 348 2.8E-52 T 14-10-2018 IPR036597 Fido-like domain superfamily Amir_1101 a9d9c6630dc87c3eee5a56a17e97808b 438 Pfam PF02661 Fic/DOC family 186 292 4.5E-19 T 14-10-2018 IPR003812 Fido domain Amir_1682 89c03702b7af6a4cbaa1e7772f44afaa 334 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_1682 89c03702b7af6a4cbaa1e7772f44afaa 334 SMART SM00382 34 236 4.3E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1682 89c03702b7af6a4cbaa1e7772f44afaa 334 SUPERFAMILY SSF52540 5 256 4.53E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1682 89c03702b7af6a4cbaa1e7772f44afaa 334 Pfam PF00005 ABC transporter 26 186 9.5E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1682 89c03702b7af6a4cbaa1e7772f44afaa 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 302 1.9E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_1682 89c03702b7af6a4cbaa1e7772f44afaa 334 Gene3D G3DSA:3.40.50.300 3 332 1.0E-91 T 14-10-2018 Amir_1682 89c03702b7af6a4cbaa1e7772f44afaa 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 310 2.8E-22 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_4684 e49a7515e27c8f022421cd4805b1d0b8 526 SUPERFAMILY SSF56801 14 521 6.93E-146 T 14-10-2018 Amir_4684 e49a7515e27c8f022421cd4805b1d0b8 526 Pfam PF13193 AMP-binding enzyme C-terminal domain 433 509 5.5E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_4684 e49a7515e27c8f022421cd4805b1d0b8 526 ProSitePatterns PS00455 Putative AMP-binding domain signature. 176 187 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4684 e49a7515e27c8f022421cd4805b1d0b8 526 Gene3D G3DSA:3.40.50.12780 10 417 2.2E-115 T 14-10-2018 Amir_4684 e49a7515e27c8f022421cd4805b1d0b8 526 Gene3D G3DSA:3.30.300.310 420 522 1.8E-28 T 14-10-2018 Amir_4684 e49a7515e27c8f022421cd4805b1d0b8 526 Pfam PF00501 AMP-binding enzyme 21 424 1.3E-102 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 Pfam PF04545 Sigma-70, region 4 265 318 5.1E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 Pfam PF04542 Sigma-70 region 2 97 166 5.3E-22 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 Pfam PF04539 Sigma-70 region 3 176 251 1.3E-25 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 PRINTS PR00046 Major sigma-70 factor signature 269 281 3.5E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 PRINTS PR00046 Major sigma-70 factor signature 290 305 3.5E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 PRINTS PR00046 Major sigma-70 factor signature 145 153 3.5E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 PRINTS PR00046 Major sigma-70 factor signature 121 134 3.5E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 PRINTS PR00046 Major sigma-70 factor signature 305 316 3.5E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 SUPERFAMILY SSF88659 227 322 2.99E-25 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 Gene3D G3DSA:1.10.10.10 170 247 4.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 Pfam PF00140 Sigma-70 factor, region 1.2 32 65 5.6E-14 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 290 316 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 Gene3D G3DSA:1.20.120.1810 31 166 4.5E-51 T 14-10-2018 Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 SUPERFAMILY SSF88659 170 243 2.66E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 93 318 2.0E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 121 134 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 Gene3D G3DSA:1.10.10.10 253 330 1.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1493 d42d8e376d45972970c2b19371fd1c05 330 SUPERFAMILY SSF88946 32 167 4.19E-52 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_4961 d6f5b364e3c2827d29abc8b88e0e28fd 262 Gene3D G3DSA:3.10.129.90 1 261 2.0E-71 T 14-10-2018 Amir_4961 d6f5b364e3c2827d29abc8b88e0e28fd 262 Pfam PF13622 Thioesterase-like superfamily 24 258 2.0E-37 T 14-10-2018 Amir_4961 d6f5b364e3c2827d29abc8b88e0e28fd 262 SUPERFAMILY SSF54637 5 109 1.19E-12 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_4961 d6f5b364e3c2827d29abc8b88e0e28fd 262 SUPERFAMILY SSF54637 157 261 1.17E-5 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_1386 1c53be400959ff7083f59fa8c15e79e3 144 SUPERFAMILY SSF55961 4 142 3.3E-28 T 14-10-2018 Amir_1386 1c53be400959ff7083f59fa8c15e79e3 144 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 5 141 9.7E-16 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase Amir_1386 1c53be400959ff7083f59fa8c15e79e3 144 Gene3D G3DSA:3.30.530.20 2 143 2.0E-35 T 14-10-2018 IPR023393 START-like domain superfamily Amir_0386 4ccc3d6b7407f56ba2510f21c6f8c710 258 SUPERFAMILY SSF52266 5 190 9.01E-36 T 14-10-2018 Amir_0386 4ccc3d6b7407f56ba2510f21c6f8c710 258 Gene3D G3DSA:3.40.50.1110 2 191 9.6E-26 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_0386 4ccc3d6b7407f56ba2510f21c6f8c710 258 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 9 181 5.5E-25 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_3663 4bf606fd72e56d6b96c0dad771dc5a6b 292 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 6.4E-25 T 14-10-2018 IPR000182 GNAT domain Amir_3663 4bf606fd72e56d6b96c0dad771dc5a6b 292 SUPERFAMILY SSF55729 3 164 2.86E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_3663 4bf606fd72e56d6b96c0dad771dc5a6b 292 SUPERFAMILY SSF54593 180 291 2.97E-9 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_3663 4bf606fd72e56d6b96c0dad771dc5a6b 292 Gene3D G3DSA:3.40.630.30 1 169 3.4E-45 T 14-10-2018 Amir_3663 4bf606fd72e56d6b96c0dad771dc5a6b 292 Gene3D G3DSA:3.10.180.10 175 292 1.6E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_4893 af530d6ffaef4ef94b418f265b9dd2d8 280 Gene3D G3DSA:3.40.190.10 158 253 4.5E-22 T 14-10-2018 Amir_4893 af530d6ffaef4ef94b418f265b9dd2d8 280 Gene3D G3DSA:3.40.190.10 102 272 4.5E-22 T 14-10-2018 Amir_4893 af530d6ffaef4ef94b418f265b9dd2d8 280 SUPERFAMILY SSF46785 1 85 2.1E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4893 af530d6ffaef4ef94b418f265b9dd2d8 280 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.1E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4893 af530d6ffaef4ef94b418f265b9dd2d8 280 SUPERFAMILY SSF53850 102 279 3.72E-21 T 14-10-2018 Amir_4893 af530d6ffaef4ef94b418f265b9dd2d8 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4893 af530d6ffaef4ef94b418f265b9dd2d8 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4893 af530d6ffaef4ef94b418f265b9dd2d8 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4893 af530d6ffaef4ef94b418f265b9dd2d8 280 Pfam PF03466 LysR substrate binding domain 102 278 1.0E-20 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_4893 af530d6ffaef4ef94b418f265b9dd2d8 280 Gene3D G3DSA:1.10.10.10 1 83 4.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2275 c451741e7dd08e0641a61ae9816537ba 555 Gene3D G3DSA:3.40.50.12780 9 433 9.6E-119 T 14-10-2018 Amir_2275 c451741e7dd08e0641a61ae9816537ba 555 Gene3D G3DSA:3.30.300.310 436 539 1.2E-21 T 14-10-2018 Amir_2275 c451741e7dd08e0641a61ae9816537ba 555 Pfam PF13193 AMP-binding enzyme C-terminal domain 449 526 1.8E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_2275 c451741e7dd08e0641a61ae9816537ba 555 SUPERFAMILY SSF56801 18 538 9.94E-134 T 14-10-2018 Amir_2275 c451741e7dd08e0641a61ae9816537ba 555 Pfam PF00501 AMP-binding enzyme 42 440 1.9E-78 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_5964 2303caf02f02dc2ef3df8305a12a998c 267 ProSitePatterns PS00517 Ribonuclease III family signature. 49 57 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Amir_5964 2303caf02f02dc2ef3df8305a12a998c 267 Pfam PF00035 Double-stranded RNA binding motif 170 235 2.8E-16 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain Amir_5964 2303caf02f02dc2ef3df8305a12a998c 267 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 25 233 7.2E-68 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Amir_5964 2303caf02f02dc2ef3df8305a12a998c 267 Gene3D G3DSA:1.10.1520.10 10 163 4.3E-45 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Amir_5964 2303caf02f02dc2ef3df8305a12a998c 267 SMART SM00358 170 236 4.8E-24 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain Amir_5964 2303caf02f02dc2ef3df8305a12a998c 267 Hamap MF_00104 Ribonuclease 3 [rnc]. 16 232 29.796 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Amir_5964 2303caf02f02dc2ef3df8305a12a998c 267 SUPERFAMILY SSF54768 124 235 1.54E-25 T 14-10-2018 Amir_5964 2303caf02f02dc2ef3df8305a12a998c 267 SUPERFAMILY SSF69065 14 171 1.74E-44 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Amir_5964 2303caf02f02dc2ef3df8305a12a998c 267 SMART SM00535 27 163 1.1E-50 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Amir_5964 2303caf02f02dc2ef3df8305a12a998c 267 Gene3D G3DSA:3.30.160.20 169 234 4.8E-21 T 14-10-2018 Amir_5964 2303caf02f02dc2ef3df8305a12a998c 267 Pfam PF14622 Ribonuclease-III-like 25 153 6.8E-34 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Amir_5254 6205b4a48c136cda430de592adeba453 171 Hamap MF_00109 Shikimate kinase [aroK]. 2 167 24.683 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Amir_5254 6205b4a48c136cda430de592adeba453 171 ProSitePatterns PS01128 Shikimate kinase signature. 58 83 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Amir_5254 6205b4a48c136cda430de592adeba453 171 Gene3D G3DSA:3.40.50.300 3 170 1.9E-47 T 14-10-2018 Amir_5254 6205b4a48c136cda430de592adeba453 171 SUPERFAMILY SSF52540 2 164 7.23E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5254 6205b4a48c136cda430de592adeba453 171 PRINTS PR01100 Shikimate kinase family signature 75 84 1.8E-12 T 14-10-2018 Amir_5254 6205b4a48c136cda430de592adeba453 171 PRINTS PR01100 Shikimate kinase family signature 57 65 1.8E-12 T 14-10-2018 Amir_5254 6205b4a48c136cda430de592adeba453 171 PRINTS PR01100 Shikimate kinase family signature 5 20 1.8E-12 T 14-10-2018 Amir_5254 6205b4a48c136cda430de592adeba453 171 PRINTS PR01100 Shikimate kinase family signature 95 112 1.8E-12 T 14-10-2018 Amir_5254 6205b4a48c136cda430de592adeba453 171 PRINTS PR01100 Shikimate kinase family signature 29 42 1.8E-12 T 14-10-2018 Amir_5254 6205b4a48c136cda430de592adeba453 171 Pfam PF01202 Shikimate kinase 11 164 4.7E-38 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Amir_5186 9fbd80f4d197f85adacbe08a598e8d3f 697 TIGRFAM TIGR00232 tktlase_bact: transketolase 23 691 5.3E-243 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 Amir_5186 9fbd80f4d197f85adacbe08a598e8d3f 697 Pfam PF02780 Transketolase, C-terminal domain 579 685 8.4E-13 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Amir_5186 9fbd80f4d197f85adacbe08a598e8d3f 697 Pfam PF02779 Transketolase, pyrimidine binding domain 372 552 3.5E-46 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amir_5186 9fbd80f4d197f85adacbe08a598e8d3f 697 SUPERFAMILY SSF52922 563 694 1.96E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_5186 9fbd80f4d197f85adacbe08a598e8d3f 697 SUPERFAMILY SSF52518 363 555 1.46E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_5186 9fbd80f4d197f85adacbe08a598e8d3f 697 SMART SM00861 373 553 7.6E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amir_5186 9fbd80f4d197f85adacbe08a598e8d3f 697 ProSitePatterns PS00801 Transketolase signature 1. 29 49 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_5186 9fbd80f4d197f85adacbe08a598e8d3f 697 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 21 356 2.0E-137 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_5186 9fbd80f4d197f85adacbe08a598e8d3f 697 Gene3D G3DSA:3.40.50.970 353 563 1.1E-82 T 14-10-2018 Amir_5186 9fbd80f4d197f85adacbe08a598e8d3f 697 SUPERFAMILY SSF52518 15 342 3.4E-100 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_5186 9fbd80f4d197f85adacbe08a598e8d3f 697 Gene3D G3DSA:3.40.50.920 568 695 2.2E-42 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_5186 9fbd80f4d197f85adacbe08a598e8d3f 697 ProSitePatterns PS00802 Transketolase signature 2. 495 511 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_5186 9fbd80f4d197f85adacbe08a598e8d3f 697 Gene3D G3DSA:3.40.50.970 1 352 5.3E-115 T 14-10-2018 Amir_4613 b9d76dc2dbb67d872080660ef429e596 427 SUPERFAMILY SSF48208 21 416 2.13E-145 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_4613 b9d76dc2dbb67d872080660ef429e596 427 SMART SM01149 20 414 2.9E-233 T 14-10-2018 IPR008313 Metal-independent alpha-mannosidase Amir_4613 b9d76dc2dbb67d872080660ef429e596 427 Pfam PF06824 Metal-independent alpha-mannosidase (GH125) 25 412 3.5E-127 T 14-10-2018 IPR008313 Metal-independent alpha-mannosidase Amir_4613 b9d76dc2dbb67d872080660ef429e596 427 PIRSF PIRSF028846 1 422 6.9E-153 T 14-10-2018 IPR008313 Metal-independent alpha-mannosidase Amir_4613 b9d76dc2dbb67d872080660ef429e596 427 Gene3D G3DSA:1.50.10.10 2 415 5.5E-140 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Amir_2979 c8c93fc08783034fd53b47711d548a5e 421 Pfam PF07690 Major Facilitator Superfamily 246 413 4.2E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2979 c8c93fc08783034fd53b47711d548a5e 421 Gene3D G3DSA:1.20.1250.20 233 420 2.8E-21 T 14-10-2018 Amir_2979 c8c93fc08783034fd53b47711d548a5e 421 Gene3D G3DSA:1.20.1250.20 28 215 7.9E-18 T 14-10-2018 Amir_2979 c8c93fc08783034fd53b47711d548a5e 421 SUPERFAMILY SSF103473 17 419 1.57E-43 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2979 c8c93fc08783034fd53b47711d548a5e 421 PRINTS PR01035 Tetracycline resistance protein signature 66 85 2.3E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_2979 c8c93fc08783034fd53b47711d548a5e 421 PRINTS PR01035 Tetracycline resistance protein signature 38 54 2.3E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_2979 c8c93fc08783034fd53b47711d548a5e 421 PRINTS PR01035 Tetracycline resistance protein signature 156 178 2.3E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_2979 c8c93fc08783034fd53b47711d548a5e 421 PRINTS PR01035 Tetracycline resistance protein signature 305 326 2.3E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_2979 c8c93fc08783034fd53b47711d548a5e 421 ProSitePatterns PS00216 Sugar transport proteins signature 1. 295 312 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Amir_3695 ea513ba93bad372aca03343dd7dded0f 603 SMART SM00382 380 566 1.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3695 ea513ba93bad372aca03343dd7dded0f 603 Pfam PF00005 ABC transporter 373 520 2.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3695 ea513ba93bad372aca03343dd7dded0f 603 Gene3D G3DSA:1.20.1560.10 11 342 2.5E-33 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_3695 ea513ba93bad372aca03343dd7dded0f 603 SUPERFAMILY SSF52540 348 590 9.67E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3695 ea513ba93bad372aca03343dd7dded0f 603 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3695 ea513ba93bad372aca03343dd7dded0f 603 Pfam PF00664 ABC transporter transmembrane region 46 239 9.9E-17 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_3695 ea513ba93bad372aca03343dd7dded0f 603 SUPERFAMILY SSF90123 29 341 2.49E-33 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_3695 ea513ba93bad372aca03343dd7dded0f 603 Gene3D G3DSA:3.40.50.300 350 599 3.2E-89 T 14-10-2018 Amir_6444 a8022954a3f9f512a5172066acecd787 880 SUPERFAMILY SSF82607 16 85 6.93E-5 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_6444 a8022954a3f9f512a5172066acecd787 880 Pfam PF02575 YbaB/EbfC DNA-binding family 11 85 1.2E-7 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_5296 b0af65792a377fd729db022b603547e1 282 Gene3D G3DSA:3.40.50.150 16 194 3.7E-29 T 14-10-2018 Amir_5296 b0af65792a377fd729db022b603547e1 282 SUPERFAMILY SSF53335 11 239 3.19E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_5296 b0af65792a377fd729db022b603547e1 282 Pfam PF08241 Methyltransferase domain 68 156 2.2E-13 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_3700 9ab320b9dc1118f47ae60456c07bfbf2 186 SUPERFAMILY SSF46689 10 73 3.49E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3700 9ab320b9dc1118f47ae60456c07bfbf2 186 Gene3D G3DSA:1.10.357.10 1 186 1.9E-47 T 14-10-2018 Amir_3700 9ab320b9dc1118f47ae60456c07bfbf2 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.3E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3700 9ab320b9dc1118f47ae60456c07bfbf2 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.3E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3700 9ab320b9dc1118f47ae60456c07bfbf2 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 2.5E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3700 9ab320b9dc1118f47ae60456c07bfbf2 186 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 55 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_2680 6c53b0e022f2d4ae135b45689d79b860 601 Gene3D G3DSA:1.20.1720.10 15 219 5.8E-41 T 14-10-2018 Amir_2680 6c53b0e022f2d4ae135b45689d79b860 601 Gene3D G3DSA:1.20.1250.20 259 502 1.3E-12 T 14-10-2018 Amir_2680 6c53b0e022f2d4ae135b45689d79b860 601 Pfam PF07690 Major Facilitator Superfamily 18 410 4.9E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2680 6c53b0e022f2d4ae135b45689d79b860 601 SUPERFAMILY SSF103473 5 503 3.66E-61 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_1185 c4a1697f93b83545839354a4a07a256c 246 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 1 206 5.1E-55 T 14-10-2018 IPR018768 Domain of unknown function DUF2344 Amir_1185 c4a1697f93b83545839354a4a07a256c 246 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 1 180 2.7E-49 T 14-10-2018 IPR018768 Domain of unknown function DUF2344 Amir_3976 958d3bfea7cc295f9ff1e934899abb3a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.6E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3976 958d3bfea7cc295f9ff1e934899abb3a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.6E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3976 958d3bfea7cc295f9ff1e934899abb3a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.6E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3976 958d3bfea7cc295f9ff1e934899abb3a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.6E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3976 958d3bfea7cc295f9ff1e934899abb3a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.6E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3976 958d3bfea7cc295f9ff1e934899abb3a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.6E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3976 958d3bfea7cc295f9ff1e934899abb3a 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 241 2.5E-61 T 14-10-2018 Amir_3976 958d3bfea7cc295f9ff1e934899abb3a 244 Gene3D G3DSA:3.40.50.720 1 243 1.9E-77 T 14-10-2018 Amir_3976 958d3bfea7cc295f9ff1e934899abb3a 244 SUPERFAMILY SSF51735 5 241 2.41E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3976 958d3bfea7cc295f9ff1e934899abb3a 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 185 0.0093 T 14-10-2018 Amir_3976 958d3bfea7cc295f9ff1e934899abb3a 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.40.47.10 1178 1285 6.5E-23 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SUPERFAMILY SSF51735 2629 2763 6.69E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.30.70.3290 829 909 2.2E-47 T 14-10-2018 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SUPERFAMILY SSF53901 2403 2525 8.06E-13 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SMART SM01294 3063 3127 0.0027 T 14-10-2018 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.40.47.10 2407 2458 4.6E-7 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SUPERFAMILY SSF55048 217 281 1.44E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SUPERFAMILY SSF55048 1614 1675 1.01E-7 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SUPERFAMILY SSF51735 2022 2230 1.32E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.40.50.720 1842 2251 4.2E-91 T 14-10-2018 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.40.47.10 2459 2564 3.0E-7 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.40.50.11460 2598 2763 7.9E-37 T 14-10-2018 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:1.10.1200.10 3046 3134 1.1E-20 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SUPERFAMILY SSF53901 588 755 1.98E-26 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:1.10.1200.10 490 578 7.7E-18 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SUPERFAMILY SSF47336 505 603 4.32E-15 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Pfam PF00550 Phosphopantetheine attachment site 3064 3127 1.8E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Pfam PF00550 Phosphopantetheine attachment site 527 574 3.5E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.40.50.720 2772 3018 6.5E-50 T 14-10-2018 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.30.70.3290 1100 1138 1.2E-18 T 14-10-2018 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SUPERFAMILY SSF51735 2775 2973 2.45E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.40.47.10 2264 2406 2.1E-31 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.40.366.10 910 1026 2.2E-47 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.40.366.10 96 395 4.0E-122 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.40.366.10 1488 1787 6.8E-133 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SMART SM00825 Beta-ketoacyl synthase 2265 2525 5.5E-18 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Pfam PF00698 Acyl transferase domain 97 411 1.5E-66 T 14-10-2018 IPR014043 Acyl transferase Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Pfam PF00698 Acyl transferase domain 1503 1803 9.1E-59 T 14-10-2018 IPR014043 Acyl transferase Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Pfam PF00698 Acyl transferase domain 923 1025 2.0E-20 T 14-10-2018 IPR014043 Acyl transferase Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SMART SM00823 Phosphopantetheine attachment site 508 579 5.9E-16 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SMART SM00823 Phosphopantetheine attachment site 3062 3131 2.7E-19 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SUPERFAMILY SSF53901 2265 2426 1.9E-32 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SUPERFAMILY SSF52151 1488 1768 3.4E-53 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Pfam PF08659 KR domain 2775 2969 6.2E-41 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Pfam PF08659 KR domain 2027 2197 2.4E-34 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SUPERFAMILY SSF52151 96 383 1.1E-52 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.30.70.3290 11 428 4.0E-122 T 14-10-2018 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2292 2411 3.1E-24 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 618 674 2.2E-8 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1289 1338 2.1E-4 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1180 1283 9.4E-14 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 685 729 9.1E-5 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.40.366.10 1051 1099 1.2E-18 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SUPERFAMILY SSF51735 1841 2015 5.9E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.40.47.10 579 732 1.1E-22 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.30.70.3290 1408 1831 6.8E-133 T 14-10-2018 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2027 2199 4.0E-11 T 14-10-2018 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2775 2971 1.6E-30 T 14-10-2018 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1502 1784 3.3E-79 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 98 392 4.6E-88 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SUPERFAMILY SSF53901 1180 1363 7.84E-29 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SUPERFAMILY SSF52151 909 1091 3.4E-25 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 Gene3D G3DSA:3.40.47.10 1286 1371 2.4E-7 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4359 9664ec8e72501bd18be1dc976b84867d 3208 SUPERFAMILY SSF47336 3059 3139 2.49E-18 T 14-10-2018 IPR036736 ACP-like superfamily Amir_6010 c4168944e3b09244aca0a4ef4b4f571a 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.6E-21 T 14-10-2018 Amir_6010 c4168944e3b09244aca0a4ef4b4f571a 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.6E-21 T 14-10-2018 Amir_6010 c4168944e3b09244aca0a4ef4b4f571a 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.6E-21 T 14-10-2018 Amir_6010 c4168944e3b09244aca0a4ef4b4f571a 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 2.6E-21 T 14-10-2018 Amir_6010 c4168944e3b09244aca0a4ef4b4f571a 410 SUPERFAMILY SSF51905 4 365 6.98E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6010 c4168944e3b09244aca0a4ef4b4f571a 410 Pfam PF01494 FAD binding domain 4 346 2.4E-55 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_6010 c4168944e3b09244aca0a4ef4b4f571a 410 Gene3D G3DSA:3.50.50.60 228 362 9.7E-18 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6010 c4168944e3b09244aca0a4ef4b4f571a 410 Gene3D G3DSA:3.50.50.60 1 190 2.2E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0313 a7e1eb98dfd85da5e94aae01ddb582f7 743 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 5 613 36.611 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Amir_0313 a7e1eb98dfd85da5e94aae01ddb582f7 743 Gene3D G3DSA:1.10.8.60 336 413 4.8E-26 T 14-10-2018 Amir_0313 a7e1eb98dfd85da5e94aae01ddb582f7 743 Gene3D G3DSA:3.40.50.300 153 334 3.0E-69 T 14-10-2018 Amir_0313 a7e1eb98dfd85da5e94aae01ddb582f7 743 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 333 1.1E-45 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amir_0313 a7e1eb98dfd85da5e94aae01ddb582f7 743 SUPERFAMILY SSF140990 416 609 6.93E-69 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Amir_0313 a7e1eb98dfd85da5e94aae01ddb582f7 743 Pfam PF01434 Peptidase family M41 398 604 1.2E-78 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Amir_0313 a7e1eb98dfd85da5e94aae01ddb582f7 743 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 115 605 1.4E-228 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Amir_0313 a7e1eb98dfd85da5e94aae01ddb582f7 743 SUPERFAMILY SSF52540 158 405 4.55E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0313 a7e1eb98dfd85da5e94aae01ddb582f7 743 Gene3D G3DSA:1.20.58.760 416 618 1.1E-70 T 14-10-2018 Amir_0313 a7e1eb98dfd85da5e94aae01ddb582f7 743 SMART SM00382 198 337 2.8E-25 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0313 a7e1eb98dfd85da5e94aae01ddb582f7 743 ProSitePatterns PS00674 AAA-protein family signature. 305 323 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Amir_4811 390593643ea3faf680b6ca757f5c1351 1067 SUPERFAMILY SSF52540 191 364 1.74E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4811 390593643ea3faf680b6ca757f5c1351 1067 Pfam PF05729 NACHT domain 202 360 1.3E-15 T 14-10-2018 IPR007111 NACHT nucleoside triphosphatase Amir_4811 390593643ea3faf680b6ca757f5c1351 1067 Gene3D G3DSA:3.40.50.300 157 344 2.5E-9 T 14-10-2018 Amir_4811 390593643ea3faf680b6ca757f5c1351 1067 Pfam PF02194 PXA domain 343 465 7.1E-5 T 14-10-2018 IPR003114 Phox-associated domain Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 Gene3D G3DSA:1.20.1640.10 237 423 1.6E-8 T 14-10-2018 Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 7 426 35.589 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 Gene3D G3DSA:3.30.70.3400 35 119 4.7E-25 T 14-10-2018 Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 Pfam PF07549 SecD/SecF GG Motif 26 48 2.2E-4 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 Pfam PF07549 SecD/SecF GG Motif 466 486 6.9E-5 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 Pfam PF02355 Protein export membrane protein 246 411 1.7E-10 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 Pfam PF02355 Protein export membrane protein 540 716 4.0E-54 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 SUPERFAMILY SSF82866 221 417 6.28E-37 T 14-10-2018 Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 SUPERFAMILY SSF82866 528 719 3.66E-29 T 14-10-2018 Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 189 404 8.6E-61 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 Gene3D G3DSA:3.30.1360.200 123 236 4.9E-20 T 14-10-2018 Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 Gene3D G3DSA:1.20.1640.10 539 718 6.9E-8 T 14-10-2018 Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 411 1.9E-82 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 470 707 3.9E-54 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 442 720 24.079 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 PRINTS PR01755 Bacterial translocase SecF protein signature 577 591 4.5E-22 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 PRINTS PR01755 Bacterial translocase SecF protein signature 625 643 4.5E-22 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 PRINTS PR01755 Bacterial translocase SecF protein signature 469 484 4.5E-22 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amir_1073 532baff9adc9cafc892a41ce39a220f1 753 PRINTS PR01755 Bacterial translocase SecF protein signature 657 672 4.5E-22 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amir_4888 5f193b73fb1f1815d6e5de99d7777869 343 Gene3D G3DSA:3.40.190.10 126 227 3.5E-54 T 14-10-2018 Amir_4888 5f193b73fb1f1815d6e5de99d7777869 343 Pfam PF09084 NMT1/THI5 like 56 262 6.9E-40 T 14-10-2018 IPR015168 SsuA/THI5-like Amir_4888 5f193b73fb1f1815d6e5de99d7777869 343 Gene3D G3DSA:3.40.190.10 56 320 3.5E-54 T 14-10-2018 Amir_4888 5f193b73fb1f1815d6e5de99d7777869 343 SUPERFAMILY SSF53850 44 276 1.16E-42 T 14-10-2018 Amir_4888 5f193b73fb1f1815d6e5de99d7777869 343 SMART SM00062 45 266 9.4E-4 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_5930 9d43da9927e0496e63277ca4621db6b5 518 SMART SM00382 99 303 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5930 9d43da9927e0496e63277ca4621db6b5 518 Gene3D G3DSA:1.20.120.140 5 307 2.4E-121 T 14-10-2018 Amir_5930 9d43da9927e0496e63277ca4621db6b5 518 Gene3D G3DSA:1.10.260.30 313 436 3.8E-38 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Amir_5930 9d43da9927e0496e63277ca4621db6b5 518 SMART SM00963 1 86 1.6E-33 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amir_5930 9d43da9927e0496e63277ca4621db6b5 518 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 428 4.9E-178 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Amir_5930 9d43da9927e0496e63277ca4621db6b5 518 SMART SM00962 100 298 1.3E-108 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amir_5930 9d43da9927e0496e63277ca4621db6b5 518 Pfam PF00448 SRP54-type protein, GTPase domain 100 298 8.9E-70 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amir_5930 9d43da9927e0496e63277ca4621db6b5 518 SUPERFAMILY SSF47446 329 430 4.58E-32 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Amir_5930 9d43da9927e0496e63277ca4621db6b5 518 SUPERFAMILY SSF52540 42 356 2.86E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5930 9d43da9927e0496e63277ca4621db6b5 518 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 7.1E-21 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amir_5930 9d43da9927e0496e63277ca4621db6b5 518 Gene3D G3DSA:3.40.50.300 90 287 2.4E-121 T 14-10-2018 Amir_5930 9d43da9927e0496e63277ca4621db6b5 518 Pfam PF02978 Signal peptide binding domain 330 427 1.2E-28 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Amir_5930 9d43da9927e0496e63277ca4621db6b5 518 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 478 33.442 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Amir_5930 9d43da9927e0496e63277ca4621db6b5 518 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 271 284 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amir_1696 90c4e2e21e498a7eb418f902878bb6ad 396 Pfam PF02355 Protein export membrane protein 135 317 8.3E-57 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Amir_1696 90c4e2e21e498a7eb418f902878bb6ad 396 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 49 308 2.4E-71 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Amir_1696 90c4e2e21e498a7eb418f902878bb6ad 396 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 74 305 3.4E-51 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amir_1696 90c4e2e21e498a7eb418f902878bb6ad 396 Pfam PF07549 SecD/SecF GG Motif 45 68 1.8E-9 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Amir_1696 90c4e2e21e498a7eb418f902878bb6ad 396 PRINTS PR01755 Bacterial translocase SecF protein signature 168 182 3.4E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amir_1696 90c4e2e21e498a7eb418f902878bb6ad 396 PRINTS PR01755 Bacterial translocase SecF protein signature 48 63 3.4E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amir_1696 90c4e2e21e498a7eb418f902878bb6ad 396 PRINTS PR01755 Bacterial translocase SecF protein signature 216 234 3.4E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amir_1696 90c4e2e21e498a7eb418f902878bb6ad 396 PRINTS PR01755 Bacterial translocase SecF protein signature 251 266 3.4E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amir_1696 90c4e2e21e498a7eb418f902878bb6ad 396 Gene3D G3DSA:1.20.1640.10 135 328 2.4E-6 T 14-10-2018 Amir_1696 90c4e2e21e498a7eb418f902878bb6ad 396 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 21 319 24.303 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Amir_1696 90c4e2e21e498a7eb418f902878bb6ad 396 SUPERFAMILY SSF82866 140 316 4.45E-29 T 14-10-2018 Amir_4585 f6c9faada63bc5b6fa6bf10acf29699e 1414 SUPERFAMILY SSF53955 487 684 3.94E-5 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Amir_4585 f6c9faada63bc5b6fa6bf10acf29699e 1414 SUPERFAMILY SSF82171 57 367 8.04E-7 T 14-10-2018 Amir_6653 58cb1eb2cb7a386f39836d950a577a33 163 Gene3D G3DSA:3.30.70.990 11 100 5.2E-60 T 14-10-2018 IPR035570 UPF0234, N-terminal Amir_6653 58cb1eb2cb7a386f39836d950a577a33 163 SUPERFAMILY SSF89963 4 88 1.05E-25 T 14-10-2018 IPR036183 YajQ-like superfamily Amir_6653 58cb1eb2cb7a386f39836d950a577a33 163 Gene3D G3DSA:3.30.70.860 5 163 5.2E-60 T 14-10-2018 IPR035571 UPF0234-like, C-terminal Amir_6653 58cb1eb2cb7a386f39836d950a577a33 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 3 163 24.937 T 14-10-2018 IPR007551 Protein of unknown function DUF520 Amir_6653 58cb1eb2cb7a386f39836d950a577a33 163 Pfam PF04461 Protein of unknown function (DUF520) 4 163 5.3E-60 T 14-10-2018 IPR007551 Protein of unknown function DUF520 Amir_6653 58cb1eb2cb7a386f39836d950a577a33 163 SUPERFAMILY SSF89963 92 163 2.88E-24 T 14-10-2018 IPR036183 YajQ-like superfamily Amir_4452 a6e70e51f20f165734ad6465d4950646 385 Pfam PF00196 Bacterial regulatory proteins, luxR family 330 373 5.1E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4452 a6e70e51f20f165734ad6465d4950646 385 SMART SM00421 329 378 1.7E-4 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4452 a6e70e51f20f165734ad6465d4950646 385 SUPERFAMILY SSF46894 329 384 3.74E-9 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4452 a6e70e51f20f165734ad6465d4950646 385 Gene3D G3DSA:1.10.10.10 260 384 1.7E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4452 a6e70e51f20f165734ad6465d4950646 385 SUPERFAMILY SSF56024 222 309 5.73E-5 T 14-10-2018 Amir_4125 d5eae1ba0f8018e79e4a0cad7b85453a 154 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Amir_4125 d5eae1ba0f8018e79e4a0cad7b85453a 154 Gene3D G3DSA:3.10.20.30 1 75 1.9E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Amir_4125 d5eae1ba0f8018e79e4a0cad7b85453a 154 SUPERFAMILY SSF47741 73 151 1.02E-30 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Amir_4125 d5eae1ba0f8018e79e4a0cad7b85453a 154 Gene3D G3DSA:1.10.150.120 76 153 4.6E-25 T 14-10-2018 Amir_4125 d5eae1ba0f8018e79e4a0cad7b85453a 154 SUPERFAMILY SSF54292 6 80 1.19E-20 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amir_4125 d5eae1ba0f8018e79e4a0cad7b85453a 154 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 53 2.4E-6 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Amir_4125 d5eae1ba0f8018e79e4a0cad7b85453a 154 Pfam PF01799 [2Fe-2S] binding domain 73 145 8.9E-27 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Amir_2467 b46522394f9431c7139b70ffe098426a 1064 SUPERFAMILY SSF49785 299 469 6.56E-46 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_2467 b46522394f9431c7139b70ffe098426a 1064 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 343 465 1.4E-11 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_2467 b46522394f9431c7139b70ffe098426a 1064 Gene3D G3DSA:2.60.120.260 303 469 2.3E-43 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_2467 b46522394f9431c7139b70ffe098426a 1064 SUPERFAMILY SSF49303 473 565 1.78E-14 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Amir_2467 b46522394f9431c7139b70ffe098426a 1064 SMART SM00758 34 176 6.2E-24 T 14-10-2018 IPR011658 PA14 domain Amir_2467 b46522394f9431c7139b70ffe098426a 1064 Pfam PF00703 Glycosyl hydrolases family 2 473 564 6.1E-12 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Amir_2467 b46522394f9431c7139b70ffe098426a 1064 SUPERFAMILY SSF49899 865 1062 8.66E-34 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_2467 b46522394f9431c7139b70ffe098426a 1064 SUPERFAMILY SSF56988 35 200 3.79E-29 T 14-10-2018 Amir_2467 b46522394f9431c7139b70ffe098426a 1064 Gene3D G3DSA:3.90.182.10 27 187 2.4E-16 T 14-10-2018 Amir_2467 b46522394f9431c7139b70ffe098426a 1064 SMART SM00560 922 1055 1.8E-12 T 14-10-2018 IPR006558 LamG-like jellyroll fold Amir_2467 b46522394f9431c7139b70ffe098426a 1064 Gene3D G3DSA:2.60.40.10 471 565 2.6E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2467 b46522394f9431c7139b70ffe098426a 1064 Gene3D G3DSA:2.60.120.200 864 1063 2.1E-35 T 14-10-2018 Amir_2467 b46522394f9431c7139b70ffe098426a 1064 Pfam PF07691 PA14 domain 59 176 1.4E-18 T 14-10-2018 IPR011658 PA14 domain Amir_2467 b46522394f9431c7139b70ffe098426a 1064 Gene3D G3DSA:3.20.20.80 575 838 8.9E-42 T 14-10-2018 Amir_2467 b46522394f9431c7139b70ffe098426a 1064 SUPERFAMILY SSF51445 561 836 1.23E-51 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_2467 b46522394f9431c7139b70ffe098426a 1064 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 906 1058 2.5E-28 T 14-10-2018 Amir_1854 ddc3ba2d2cd8568d8dcb6a7e28d00346 505 SUPERFAMILY SSF52540 4 228 3.13E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1854 ddc3ba2d2cd8568d8dcb6a7e28d00346 505 Pfam PF00005 ABC transporter 21 170 1.7E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1854 ddc3ba2d2cd8568d8dcb6a7e28d00346 505 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_1854 ddc3ba2d2cd8568d8dcb6a7e28d00346 505 SMART SM00382 30 218 1.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1854 ddc3ba2d2cd8568d8dcb6a7e28d00346 505 SMART SM00382 282 476 4.4E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1854 ddc3ba2d2cd8568d8dcb6a7e28d00346 505 Gene3D G3DSA:3.40.50.300 264 501 1.3E-44 T 14-10-2018 Amir_1854 ddc3ba2d2cd8568d8dcb6a7e28d00346 505 Pfam PF00005 ABC transporter 276 427 1.8E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1854 ddc3ba2d2cd8568d8dcb6a7e28d00346 505 Gene3D G3DSA:3.40.50.300 1 245 4.2E-54 T 14-10-2018 Amir_1854 ddc3ba2d2cd8568d8dcb6a7e28d00346 505 SUPERFAMILY SSF52540 268 481 2.17E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0199 3a83207f377de876740889d776f63ea7 532 SUPERFAMILY SSF58104 237 530 2.88E-57 T 14-10-2018 Amir_0199 3a83207f377de876740889d776f63ea7 532 Gene3D G3DSA:1.10.287.950 217 531 4.2E-59 T 14-10-2018 Amir_0199 3a83207f377de876740889d776f63ea7 532 SMART SM00304 276 336 14.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_0199 3a83207f377de876740889d776f63ea7 532 SMART SM00304 217 269 3.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_0199 3a83207f377de876740889d776f63ea7 532 Pfam PF00672 HAMP domain 217 259 1.2E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_0199 3a83207f377de876740889d776f63ea7 532 Pfam PF12729 Four helix bundle sensory module for signal transduction 13 186 2.5E-12 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Amir_0199 3a83207f377de876740889d776f63ea7 532 SMART SM00283 284 531 6.6E-52 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_0199 3a83207f377de876740889d776f63ea7 532 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 498 8.7E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_0199 3a83207f377de876740889d776f63ea7 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 1.4E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_0199 3a83207f377de876740889d776f63ea7 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 452 481 1.4E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_0199 3a83207f377de876740889d776f63ea7 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 1.4E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_0199 3a83207f377de876740889d776f63ea7 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 298 327 1.4E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_4957 5db3097a41e6959e271d64f555a37ecc 518 Gene3D G3DSA:3.40.50.2000 13 192 3.1E-13 T 14-10-2018 Amir_4957 5db3097a41e6959e271d64f555a37ecc 518 SUPERFAMILY SSF53756 11 368 1.41E-61 T 14-10-2018 Amir_4957 5db3097a41e6959e271d64f555a37ecc 518 Gene3D G3DSA:3.40.50.2000 193 351 2.0E-36 T 14-10-2018 Amir_4957 5db3097a41e6959e271d64f555a37ecc 518 Pfam PF13439 Glycosyltransferase Family 4 24 182 1.9E-14 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amir_4957 5db3097a41e6959e271d64f555a37ecc 518 Pfam PF00534 Glycosyl transferases group 1 195 335 3.7E-27 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Amir_6526 abc181dda6fc1ebbcfa727a8cd6d30c4 444 Gene3D G3DSA:3.30.565.10 312 438 8.4E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6526 abc181dda6fc1ebbcfa727a8cd6d30c4 444 SUPERFAMILY SSF55874 343 438 5.48E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6526 abc181dda6fc1ebbcfa727a8cd6d30c4 444 Pfam PF04024 PspC domain 52 105 8.4E-14 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal Amir_6878 d8e001e9a919416594d374f45e74dc5f 79 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 4 74 2.9E-14 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amir_6878 d8e001e9a919416594d374f45e74dc5f 79 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 4 74 6.9E-25 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amir_6878 d8e001e9a919416594d374f45e74dc5f 79 SUPERFAMILY SSF82697 3 76 1.92E-22 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amir_6878 d8e001e9a919416594d374f45e74dc5f 79 Gene3D G3DSA:3.30.1280.10 2 79 8.6E-25 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amir_6878 d8e001e9a919416594d374f45e74dc5f 79 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 76 19.471 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amir_6878 d8e001e9a919416594d374f45e74dc5f 79 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 11 75 4.0E-20 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amir_6199 1e30bf3041c2c7921ca45683572f5050 425 Pfam PF13714 Phosphoenolpyruvate phosphomutase 181 403 3.3E-61 T 14-10-2018 Amir_6199 1e30bf3041c2c7921ca45683572f5050 425 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 158 167 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_6199 1e30bf3041c2c7921ca45683572f5050 425 Gene3D G3DSA:3.20.20.60 168 424 1.0E-58 T 14-10-2018 Amir_6199 1e30bf3041c2c7921ca45683572f5050 425 SUPERFAMILY SSF51621 178 409 1.47E-48 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Amir_0913 0309784c048ff5378a1bf3c35d1db1f2 978 SUPERFAMILY SSF81301 551 819 1.63E-66 T 14-10-2018 Amir_0913 0309784c048ff5378a1bf3c35d1db1f2 978 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 83 966 16.611 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 Amir_0913 0309784c048ff5378a1bf3c35d1db1f2 978 Gene3D G3DSA:1.20.120.330 822 977 5.8E-37 T 14-10-2018 Amir_0913 0309784c048ff5378a1bf3c35d1db1f2 978 Gene3D G3DSA:1.20.120.330 320 476 1.3E-37 T 14-10-2018 Amir_0913 0309784c048ff5378a1bf3c35d1db1f2 978 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 88 307 1.5E-33 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Amir_0913 0309784c048ff5378a1bf3c35d1db1f2 978 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 579 810 2.6E-57 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Amir_0913 0309784c048ff5378a1bf3c35d1db1f2 978 SUPERFAMILY SSF81593 824 976 2.2E-35 T 14-10-2018 Amir_0913 0309784c048ff5378a1bf3c35d1db1f2 978 Pfam PF08335 GlnD PII-uridylyltransferase 328 474 6.2E-32 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Amir_0913 0309784c048ff5378a1bf3c35d1db1f2 978 Pfam PF08335 GlnD PII-uridylyltransferase 833 974 1.1E-20 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Amir_0913 0309784c048ff5378a1bf3c35d1db1f2 978 Gene3D G3DSA:3.30.460.100 95 312 2.6E-52 T 14-10-2018 Amir_0913 0309784c048ff5378a1bf3c35d1db1f2 978 Gene3D G3DSA:3.30.460.100 588 816 5.7E-60 T 14-10-2018 Amir_0913 0309784c048ff5378a1bf3c35d1db1f2 978 SUPERFAMILY SSF81593 320 475 1.1E-33 T 14-10-2018 Amir_0913 0309784c048ff5378a1bf3c35d1db1f2 978 SUPERFAMILY SSF81301 70 314 7.85E-56 T 14-10-2018 Amir_5450 028daff22709a9f5aca591b5665c0f41 315 Pfam PF00764 Arginosuccinate synthase 197 277 4.0E-18 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amir_5450 028daff22709a9f5aca591b5665c0f41 315 Pfam PF00764 Arginosuccinate synthase 5 111 2.3E-18 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amir_5450 028daff22709a9f5aca591b5665c0f41 315 SUPERFAMILY SSF69864 145 279 1.7E-28 T 14-10-2018 Amir_5450 028daff22709a9f5aca591b5665c0f41 315 SUPERFAMILY SSF52402 4 136 2.02E-15 T 14-10-2018 Amir_5450 028daff22709a9f5aca591b5665c0f41 315 Gene3D G3DSA:3.40.50.620 3 134 1.2E-19 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_5450 028daff22709a9f5aca591b5665c0f41 315 Gene3D G3DSA:3.90.1260.10 135 278 1.3E-21 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amir_6411 9f50aae3d9265c91d3db565f2ed9d2f1 579 Gene3D G3DSA:3.50.50.60 33 395 8.8E-127 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6411 9f50aae3d9265c91d3db565f2ed9d2f1 579 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 409 532 1.8E-33 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Amir_6411 9f50aae3d9265c91d3db565f2ed9d2f1 579 Gene3D G3DSA:3.30.9.10 111 353 8.8E-127 T 14-10-2018 Amir_6411 9f50aae3d9265c91d3db565f2ed9d2f1 579 Pfam PF01266 FAD dependent oxidoreductase 33 381 1.3E-48 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Amir_6411 9f50aae3d9265c91d3db565f2ed9d2f1 579 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 61 73 1.4E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Amir_6411 9f50aae3d9265c91d3db565f2ed9d2f1 579 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 376 388 1.4E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Amir_6411 9f50aae3d9265c91d3db565f2ed9d2f1 579 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 107 119 1.4E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Amir_6411 9f50aae3d9265c91d3db565f2ed9d2f1 579 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 346 352 1.4E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Amir_6411 9f50aae3d9265c91d3db565f2ed9d2f1 579 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 45 55 1.4E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Amir_6411 9f50aae3d9265c91d3db565f2ed9d2f1 579 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 32 44 1.4E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Amir_6411 9f50aae3d9265c91d3db565f2ed9d2f1 579 SUPERFAMILY SSF51905 30 331 1.64E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6411 9f50aae3d9265c91d3db565f2ed9d2f1 579 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 37 54 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Amir_6411 9f50aae3d9265c91d3db565f2ed9d2f1 579 Gene3D G3DSA:1.10.8.870 420 563 2.2E-34 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Amir_6648 1658367ba81f76a525dcfa122b524754 54 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 54 9.9E-21 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6648 1658367ba81f76a525dcfa122b524754 54 Gene3D G3DSA:2.20.28.120 2 54 3.4E-24 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6648 1658367ba81f76a525dcfa122b524754 54 SUPERFAMILY SSF57829 4 54 2.87E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Amir_6648 1658367ba81f76a525dcfa122b524754 54 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6648 1658367ba81f76a525dcfa122b524754 54 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 19.734 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6648 1658367ba81f76a525dcfa122b524754 54 Pfam PF00471 Ribosomal protein L33 9 54 4.2E-22 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_3630 db01c5855959f3fe99efb7cf07ddf9f8 291 SUPERFAMILY SSF53335 66 274 1.36E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3630 db01c5855959f3fe99efb7cf07ddf9f8 291 Gene3D G3DSA:3.40.50.150 58 248 6.6E-39 T 14-10-2018 Amir_3630 db01c5855959f3fe99efb7cf07ddf9f8 291 Pfam PF08241 Methyltransferase domain 97 188 1.8E-25 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_1850 13b949674b6bface61a60b99decb5397 496 Gene3D G3DSA:2.40.10.10 254 352 9.0E-70 T 14-10-2018 Amir_1850 13b949674b6bface61a60b99decb5397 496 Gene3D G3DSA:3.30.300.50 32 108 4.0E-5 T 14-10-2018 IPR035070 Streptogrisin prodomain Amir_1850 13b949674b6bface61a60b99decb5397 496 SMART SM00458 371 496 1.8E-26 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_1850 13b949674b6bface61a60b99decb5397 496 Gene3D G3DSA:2.40.10.10 185 363 9.0E-70 T 14-10-2018 Amir_1850 13b949674b6bface61a60b99decb5397 496 Gene3D G3DSA:3.30.300.50 110 175 1.9E-8 T 14-10-2018 IPR035070 Streptogrisin prodomain Amir_1850 13b949674b6bface61a60b99decb5397 496 SUPERFAMILY SSF50370 370 494 1.02E-33 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_1850 13b949674b6bface61a60b99decb5397 496 SUPERFAMILY SSF50494 189 358 1.98E-32 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_1850 13b949674b6bface61a60b99decb5397 496 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 306 329 2.5E-39 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_1850 13b949674b6bface61a60b99decb5397 496 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 330 344 2.5E-39 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_1850 13b949674b6bface61a60b99decb5397 496 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 266 286 2.5E-39 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_1850 13b949674b6bface61a60b99decb5397 496 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 206 220 2.5E-39 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_1850 13b949674b6bface61a60b99decb5397 496 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 287 304 2.5E-39 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_1850 13b949674b6bface61a60b99decb5397 496 Gene3D G3DSA:2.80.10.50 369 495 6.1E-37 T 14-10-2018 Amir_1850 13b949674b6bface61a60b99decb5397 496 Pfam PF00652 Ricin-type beta-trefoil lectin domain 379 493 2.7E-24 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_1850 13b949674b6bface61a60b99decb5397 496 Pfam PF02983 Alpha-lytic protease prodomain 112 166 3.1E-15 T 14-10-2018 IPR004236 Peptidase S1A, alpha-lytic prodomain GO:0005576|GO:0006508|GO:0008236 Amir_5669 ad5723bc4da5b698c984e842d5da4086 684 SUPERFAMILY SSF48179 473 582 2.13E-18 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_5669 ad5723bc4da5b698c984e842d5da4086 684 SUPERFAMILY SSF51735 313 472 7.52E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5669 ad5723bc4da5b698c984e842d5da4086 684 Gene3D G3DSA:1.10.1040.50 475 679 2.2E-57 T 14-10-2018 Amir_5669 ad5723bc4da5b698c984e842d5da4086 684 Gene3D G3DSA:3.90.226.10 1 309 5.2E-97 T 14-10-2018 Amir_5669 ad5723bc4da5b698c984e842d5da4086 684 SUPERFAMILY SSF52096 3 294 6.19E-58 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_5669 ad5723bc4da5b698c984e842d5da4086 684 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 201 2.4E-29 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Amir_5669 ad5723bc4da5b698c984e842d5da4086 684 SUPERFAMILY SSF48179 592 683 3.15E-20 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_5669 ad5723bc4da5b698c984e842d5da4086 684 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 359 471 1.4E-38 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amir_5669 ad5723bc4da5b698c984e842d5da4086 684 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 353 4.0E-8 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amir_5669 ad5723bc4da5b698c984e842d5da4086 684 Gene3D G3DSA:3.40.50.720 310 473 6.5E-54 T 14-10-2018 Amir_5669 ad5723bc4da5b698c984e842d5da4086 684 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 474 569 1.1E-17 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amir_4064 2c995c09fd15ae56953a39a40b2447cc 169 Pfam PF13420 Acetyltransferase (GNAT) domain 8 160 3.0E-20 T 14-10-2018 Amir_4064 2c995c09fd15ae56953a39a40b2447cc 169 Gene3D G3DSA:3.40.630.30 5 168 7.7E-50 T 14-10-2018 Amir_4064 2c995c09fd15ae56953a39a40b2447cc 169 SUPERFAMILY SSF55729 6 167 6.62E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_2355 5965e6fe360229eb535e316380508c99 294 Pfam PF04545 Sigma-70, region 4 188 236 3.1E-12 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amir_2355 5965e6fe360229eb535e316380508c99 294 SUPERFAMILY SSF88946 19 95 2.98E-18 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_2355 5965e6fe360229eb535e316380508c99 294 SUPERFAMILY SSF88659 161 242 4.11E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_2355 5965e6fe360229eb535e316380508c99 294 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 237 1.4E-27 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_2355 5965e6fe360229eb535e316380508c99 294 Pfam PF04542 Sigma-70 region 2 23 95 7.8E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_2355 5965e6fe360229eb535e316380508c99 294 SUPERFAMILY SSF88659 97 157 1.4E-9 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_2355 5965e6fe360229eb535e316380508c99 294 Gene3D G3DSA:1.20.140.160 94 242 1.2E-34 T 14-10-2018 Amir_2355 5965e6fe360229eb535e316380508c99 294 Gene3D G3DSA:1.10.1740.10 7 92 1.0E-19 T 14-10-2018 Amir_2355 5965e6fe360229eb535e316380508c99 294 Pfam PF04539 Sigma-70 region 3 104 174 9.6E-8 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Amir_2355 5965e6fe360229eb535e316380508c99 294 PIRSF PIRSF000770 1 260 6.5E-55 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_2355 5965e6fe360229eb535e316380508c99 294 PRINTS PR00046 Major sigma-70 factor signature 192 204 3.2E-5 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_2355 5965e6fe360229eb535e316380508c99 294 PRINTS PR00046 Major sigma-70 factor signature 50 63 3.2E-5 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_2355 5965e6fe360229eb535e316380508c99 294 PRINTS PR00046 Major sigma-70 factor signature 209 224 3.2E-5 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_2355 5965e6fe360229eb535e316380508c99 294 PRINTS PR00046 Major sigma-70 factor signature 224 235 3.2E-5 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_3407 3ef9c554141df08324768ae9032003ae 192 SUPERFAMILY SSF47413 8 72 6.19E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3407 3ef9c554141df08324768ae9032003ae 192 Pfam PF07883 Cupin domain 106 173 5.5E-11 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Amir_3407 3ef9c554141df08324768ae9032003ae 192 SUPERFAMILY SSF51182 64 173 1.65E-19 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_3407 3ef9c554141df08324768ae9032003ae 192 SMART SM00530 12 67 1.7E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_3407 3ef9c554141df08324768ae9032003ae 192 Gene3D G3DSA:2.60.120.10 82 174 1.4E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_3407 3ef9c554141df08324768ae9032003ae 192 Gene3D G3DSA:1.10.260.40 2 74 2.6E-19 T 14-10-2018 Amir_3407 3ef9c554141df08324768ae9032003ae 192 Pfam PF01381 Helix-turn-helix 13 67 1.9E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 Pfam PF00501 AMP-binding enzyme 465 843 4.3E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 Pfam PF13193 AMP-binding enzyme C-terminal domain 851 921 1.9E-6 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 SMART SM00824 Thioesterase 1039 1253 5.9E-7 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 SUPERFAMILY SSF52777 186 428 3.0E-58 T 14-10-2018 Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 ProSitePatterns PS00455 Putative AMP-binding domain signature. 588 599 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 SUPERFAMILY SSF52777 7 179 7.78E-48 T 14-10-2018 Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 SMART SM00823 Phosphopantetheine attachment site 950 1019 0.0032 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 Gene3D G3DSA:3.30.559.10 6 374 3.4E-135 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 Pfam PF00668 Condensation domain 5 445 4.4E-96 T 14-10-2018 IPR001242 Condensation domain Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 Gene3D G3DSA:1.10.1200.10 936 1020 1.4E-20 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 SUPERFAMILY SSF56801 423 961 4.58E-140 T 14-10-2018 Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 Pfam PF00975 Thioesterase domain 1037 1251 1.0E-22 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 SUPERFAMILY SSF53474 1022 1253 2.48E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 486 867 4.4E-119 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 Gene3D G3DSA:3.30.300.30 838 935 2.4E-26 T 14-10-2018 Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 Pfam PF00550 Phosphopantetheine attachment site 953 1015 9.5E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 Gene3D G3DSA:3.40.50.12780 455 837 5.2E-126 T 14-10-2018 Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 SUPERFAMILY SSF47336 943 1015 2.49E-15 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 PIRSF PIRSF001617 568 691 2.7E-8 T 14-10-2018 Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 PIRSF PIRSF001617 767 813 0.61 T 14-10-2018 Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 PIRSF PIRSF001617 877 1023 6.2E-11 T 14-10-2018 Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 PIRSF PIRSF001617 187 574 2.3E-17 T 14-10-2018 Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 PIRSF PIRSF001617 808 886 4.7E-18 T 14-10-2018 Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 Gene3D G3DSA:3.40.50.1820 1025 1256 3.6E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3891 dc0a63033229ceae8a21cca2e922604c 1256 Gene3D G3DSA:3.30.559.30 183 429 3.4E-135 T 14-10-2018 Amir_3068 b36efec217ac5b4179533380a970f2b5 276 SUPERFAMILY SSF161098 68 256 1.96E-20 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3068 b36efec217ac5b4179533380a970f2b5 276 Gene3D G3DSA:1.10.3720.10 62 270 1.9E-16 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3068 b36efec217ac5b4179533380a970f2b5 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 265 4.7E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 PRINTS PR01165 Cytochrome c oxidase subunit I signature 301 316 1.6E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 PRINTS PR01165 Cytochrome c oxidase subunit I signature 386 405 1.6E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 PRINTS PR01165 Cytochrome c oxidase subunit I signature 144 156 1.6E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 PRINTS PR01165 Cytochrome c oxidase subunit I signature 27 52 1.6E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 PRINTS PR01165 Cytochrome c oxidase subunit I signature 101 125 1.6E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 194 1.6E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 376 1.6E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 PRINTS PR01165 Cytochrome c oxidase subunit I signature 255 276 1.6E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 PRINTS PR01165 Cytochrome c oxidase subunit I signature 205 224 1.6E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 PRINTS PR01165 Cytochrome c oxidase subunit I signature 436 457 1.6E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 PRINTS PR01165 Cytochrome c oxidase subunit I signature 234 255 1.6E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 PRINTS PR01165 Cytochrome c oxidase subunit I signature 74 97 1.6E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 344 1.6E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 29 532 1.7E-215 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 SUPERFAMILY SSF81442 25 534 1.18E-174 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 36 479 4.6E-148 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 Gene3D G3DSA:1.20.210.10 15 541 4.7E-206 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0989 5d72e55d64fecde0d2ad5f019ae881f3 596 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 257 311 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_4601 e8e82b51bf2b98e96263ba88564421d0 304 Pfam PF00561 alpha/beta hydrolase fold 58 196 1.7E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4601 e8e82b51bf2b98e96263ba88564421d0 304 Gene3D G3DSA:3.40.50.1820 47 297 2.8E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4601 e8e82b51bf2b98e96263ba88564421d0 304 SUPERFAMILY SSF53474 53 272 2.26E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0164 682ad133d84c738ea80263b2d21be44f 394 Gene3D G3DSA:3.40.47.10 128 391 6.0E-136 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_0164 682ad133d84c738ea80263b2d21be44f 394 Pfam PF02803 Thiolase, C-terminal domain 272 393 6.8E-35 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Amir_0164 682ad133d84c738ea80263b2d21be44f 394 Pfam PF00108 Thiolase, N-terminal domain 6 264 1.8E-66 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Amir_0164 682ad133d84c738ea80263b2d21be44f 394 PIRSF PIRSF000429 1 394 1.0E-115 T 14-10-2018 IPR002155 Thiolase GO:0016747 Amir_0164 682ad133d84c738ea80263b2d21be44f 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 392 3.0E-124 T 14-10-2018 IPR002155 Thiolase GO:0016747 Amir_0164 682ad133d84c738ea80263b2d21be44f 394 SUPERFAMILY SSF53901 273 392 7.41E-33 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_0164 682ad133d84c738ea80263b2d21be44f 394 Gene3D G3DSA:3.40.47.10 6 277 6.0E-136 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_0164 682ad133d84c738ea80263b2d21be44f 394 ProSitePatterns PS00099 Thiolases active site. 376 389 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 Amir_0164 682ad133d84c738ea80263b2d21be44f 394 SUPERFAMILY SSF53901 1 266 3.76E-71 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_6615 e9f3a1c5044ed9a01a83e8f98eea5fbd 101 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 101 24.573 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6615 e9f3a1c5044ed9a01a83e8f98eea5fbd 101 SUPERFAMILY SSF54999 5 100 9.02E-37 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Amir_6615 e9f3a1c5044ed9a01a83e8f98eea5fbd 101 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 4.8E-46 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6615 e9f3a1c5044ed9a01a83e8f98eea5fbd 101 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.7E-21 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6615 e9f3a1c5044ed9a01a83e8f98eea5fbd 101 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.7E-21 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6615 e9f3a1c5044ed9a01a83e8f98eea5fbd 101 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.7E-21 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6615 e9f3a1c5044ed9a01a83e8f98eea5fbd 101 Gene3D G3DSA:3.30.70.600 1 101 3.0E-36 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Amir_6615 e9f3a1c5044ed9a01a83e8f98eea5fbd 101 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 9.6E-35 T 14-10-2018 IPR027486 Ribosomal protein S10 domain Amir_6615 e9f3a1c5044ed9a01a83e8f98eea5fbd 101 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6615 e9f3a1c5044ed9a01a83e8f98eea5fbd 101 SMART SM01403 7 101 1.5E-55 T 14-10-2018 IPR027486 Ribosomal protein S10 domain Amir_6302 56f1a0e7cc76a3f918d4ef37400706f4 248 Pfam PF00588 SpoU rRNA Methylase family 102 240 4.0E-33 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Amir_6302 56f1a0e7cc76a3f918d4ef37400706f4 248 SUPERFAMILY SSF75217 93 246 1.31E-38 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Amir_6302 56f1a0e7cc76a3f918d4ef37400706f4 248 SMART SM00967 11 88 1.1E-11 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Amir_6302 56f1a0e7cc76a3f918d4ef37400706f4 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 12 86 4.4E-14 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Amir_6302 56f1a0e7cc76a3f918d4ef37400706f4 248 SUPERFAMILY SSF55315 6 82 1.13E-11 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Amir_6302 56f1a0e7cc76a3f918d4ef37400706f4 248 Gene3D G3DSA:3.30.1330.30 3 84 1.9E-8 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Amir_6302 56f1a0e7cc76a3f918d4ef37400706f4 248 Gene3D G3DSA:3.40.1280.10 87 247 9.1E-44 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Amir_4996 a24e9d2732a51613e3a760b28a869e34 405 Pfam PF07730 Histidine kinase 189 252 6.2E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_4996 a24e9d2732a51613e3a760b28a869e34 405 SUPERFAMILY SSF55874 277 395 4.35E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4996 a24e9d2732a51613e3a760b28a869e34 405 Gene3D G3DSA:3.30.565.10 273 396 3.7E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2930 4b1e135236dec8591e3fd120b68193f1 208 Gene3D G3DSA:1.10.10.10 95 208 1.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2930 4b1e135236dec8591e3fd120b68193f1 208 SUPERFAMILY SSF46894 133 208 1.43E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_2930 4b1e135236dec8591e3fd120b68193f1 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 2.8E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2930 4b1e135236dec8591e3fd120b68193f1 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 2.8E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2930 4b1e135236dec8591e3fd120b68193f1 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 2.8E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2930 4b1e135236dec8591e3fd120b68193f1 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 5.9E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2930 4b1e135236dec8591e3fd120b68193f1 208 SMART SM00421 145 202 2.9E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4307 f22d8191b3095ad5467f0c5b97baa008 447 Gene3D G3DSA:3.30.70.2740 326 405 1.2E-12 T 14-10-2018 Amir_4307 f22d8191b3095ad5467f0c5b97baa008 447 Gene3D G3DSA:3.30.465.40 14 230 1.1E-65 T 14-10-2018 Amir_4307 f22d8191b3095ad5467f0c5b97baa008 447 Gene3D G3DSA:1.10.45.10 406 446 1.1E-13 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Amir_4307 f22d8191b3095ad5467f0c5b97baa008 447 SUPERFAMILY SSF55103 215 446 1.96E-54 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Amir_4307 f22d8191b3095ad5467f0c5b97baa008 447 SUPERFAMILY SSF56176 13 212 2.99E-61 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amir_4307 f22d8191b3095ad5467f0c5b97baa008 447 Pfam PF02913 FAD linked oxidases, C-terminal domain 212 444 9.1E-57 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Amir_4307 f22d8191b3095ad5467f0c5b97baa008 447 Pfam PF01565 FAD binding domain 36 174 1.7E-39 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Amir_2461 6076fb9fcac9d707b8ade35183a01049 319 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 150 171 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Amir_2461 6076fb9fcac9d707b8ade35183a01049 319 SUPERFAMILY SSF51735 122 242 1.16E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2461 6076fb9fcac9d707b8ade35183a01049 319 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 98 2.3E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_2461 6076fb9fcac9d707b8ade35183a01049 319 Gene3D G3DSA:3.40.50.720 133 267 1.7E-98 T 14-10-2018 Amir_2461 6076fb9fcac9d707b8ade35183a01049 319 SUPERFAMILY SSF50129 3 154 9.43E-38 T 14-10-2018 IPR011032 GroES-like superfamily Amir_2461 6076fb9fcac9d707b8ade35183a01049 319 Gene3D G3DSA:3.90.180.10 13 315 1.7E-98 T 14-10-2018 Amir_2461 6076fb9fcac9d707b8ade35183a01049 319 Pfam PF13602 Zinc-binding dehydrogenase 192 316 2.4E-25 T 14-10-2018 Amir_2461 6076fb9fcac9d707b8ade35183a01049 319 SMART SM00829 14 316 8.1E-35 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_2570 ec52b14d86fafddd5826c86ba58ca79e 192 Gene3D G3DSA:3.40.630.30 3 190 6.0E-40 T 14-10-2018 Amir_2570 ec52b14d86fafddd5826c86ba58ca79e 192 Pfam PF13302 Acetyltransferase (GNAT) domain 15 157 1.4E-29 T 14-10-2018 IPR000182 GNAT domain Amir_2570 ec52b14d86fafddd5826c86ba58ca79e 192 SUPERFAMILY SSF55729 9 183 2.5E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_4940 64e0268d65dc930b637a61de017a0be0 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4940 64e0268d65dc930b637a61de017a0be0 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4940 64e0268d65dc930b637a61de017a0be0 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4940 64e0268d65dc930b637a61de017a0be0 310 Gene3D G3DSA:3.40.190.10 97 293 3.4E-35 T 14-10-2018 Amir_4940 64e0268d65dc930b637a61de017a0be0 310 Pfam PF03466 LysR substrate binding domain 91 297 1.8E-28 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_4940 64e0268d65dc930b637a61de017a0be0 310 SUPERFAMILY SSF53850 92 300 3.59E-29 T 14-10-2018 Amir_4940 64e0268d65dc930b637a61de017a0be0 310 SUPERFAMILY SSF46785 7 86 5.45E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4940 64e0268d65dc930b637a61de017a0be0 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 4.2E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4940 64e0268d65dc930b637a61de017a0be0 310 Gene3D G3DSA:1.10.10.10 3 86 8.7E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4940 64e0268d65dc930b637a61de017a0be0 310 Gene3D G3DSA:3.40.190.10 170 272 3.4E-35 T 14-10-2018 Amir_1215 5788383ef532d65371c2b4308302f6b5 280 Gene3D G3DSA:3.10.620.30 85 272 3.7E-51 T 14-10-2018 Amir_1215 5788383ef532d65371c2b4308302f6b5 280 SUPERFAMILY SSF54001 9 261 9.95E-40 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amir_1215 5788383ef532d65371c2b4308302f6b5 280 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 83 7.5E-20 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal Amir_1215 5788383ef532d65371c2b4308302f6b5 280 SMART SM00460 168 235 2.2E-21 T 14-10-2018 IPR002931 Transglutaminase-like Amir_1215 5788383ef532d65371c2b4308302f6b5 280 Pfam PF01841 Transglutaminase-like superfamily 126 233 5.6E-25 T 14-10-2018 IPR002931 Transglutaminase-like Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM01294 3508 3575 2.7E-5 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM01294 41 106 2.3E-4 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM01294 5236 5303 1.4E-4 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM01294 1790 1857 3.4E-5 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM01294 6959 7027 2.4E-4 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.30.70.3290 4055 4492 7.0E-152 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00825 Beta-ketoacyl synthase 1884 2308 4.2E-227 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00825 Beta-ketoacyl synthase 3601 4025 1.2E-217 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00825 Beta-ketoacyl synthase 5330 5754 2.0E-212 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00825 Beta-ketoacyl synthase 130 554 1.3E-219 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:1.10.1200.10 3490 3581 1.0E-34 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:1.10.1200.10 15 108 1.4E-28 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF47336 1787 1897 3.53E-23 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF51735 3228 3475 5.65E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 ProSitePatterns PS00012 Phosphopantetheine attachment site. 6986 7001 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF53901 3595 3969 1.82E-101 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF51735 6493 6668 8.54E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 ProSitePatterns PS00012 Phosphopantetheine attachment site. 5262 5277 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.40.366.10 672 982 3.4E-155 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.40.366.10 5856 6157 4.2E-155 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.40.366.10 2420 2720 1.4E-157 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.40.366.10 4141 4441 7.0E-152 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.30.70.3290 5773 6202 4.2E-155 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF55048 5981 6045 7.85E-12 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF55048 4267 4329 9.55E-11 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF51735 4955 5193 3.24E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF52151 4139 4424 2.12E-64 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1816 1831 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.40.47.10 1873 2331 6.4E-190 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.40.47.10 3590 4045 1.1E-183 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.40.47.10 119 583 2.0E-189 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.40.47.10 5321 5772 1.1E-181 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3599 3849 3.6E-85 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5328 5578 7.3E-86 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 128 378 2.6E-88 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1882 2132 8.1E-91 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00826 1046 1209 5.2E-85 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00826 2785 2946 2.2E-81 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00826 6215 6382 2.7E-80 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00826 4511 4672 4.6E-79 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF51735 4783 4947 3.07E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 2045 2061 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF55048 2547 2607 5.89E-8 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.40.50.720 4782 5208 7.2E-116 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.40.50.720 3062 3483 8.2E-116 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3534 3549 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.40.50.720 6490 6935 3.8E-115 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.10.129.110 6204 6489 9.2E-108 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.10.129.110 2774 3061 3.9E-113 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.10.129.110 4500 4781 6.4E-110 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.10.129.110 1036 1331 6.0E-116 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.30.70.3290 2337 2766 1.4E-157 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:1.10.1200.10 5214 5308 2.4E-36 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:1.10.1200.10 6939 7032 2.0E-30 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:1.10.1200.10 1768 1861 4.6E-36 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF47336 3505 3613 4.84E-24 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF52151 2418 2709 2.62E-67 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 2422 2717 2.1E-112 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 4143 4438 2.1E-115 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 674 978 2.8E-112 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5858 6154 1.2E-117 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF08659 KR domain 4959 5130 2.7E-52 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF08659 KR domain 1509 1682 1.7E-56 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF08659 KR domain 6679 6852 9.2E-53 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF08659 KR domain 3233 3404 8.4E-55 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF52151 671 963 1.23E-67 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF00550 Phosphopantetheine attachment site 6961 7027 9.8E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF00550 Phosphopantetheine attachment site 37 102 1.7E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF00550 Phosphopantetheine attachment site 5237 5303 1.1E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF00550 Phosphopantetheine attachment site 1791 1857 2.9E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF00550 Phosphopantetheine attachment site 3509 3575 4.6E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF47336 6950 7039 2.09E-21 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF51735 3062 3219 2.13E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.40.50.720 1502 1747 9.0E-69 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF51735 6677 6922 1.48E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF55048 801 865 2.22E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF53901 1878 2254 2.58E-104 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3232 3406 7.8E-52 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1509 1685 2.9E-53 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4958 5132 3.2E-50 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6678 6854 9.9E-48 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF14765 Polyketide synthase dehydratase 1046 1326 3.5E-54 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF14765 Polyketide synthase dehydratase 2785 3056 5.0E-47 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF14765 Polyketide synthase dehydratase 4511 4776 3.6E-52 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF14765 Polyketide synthase dehydratase 6215 6488 3.6E-55 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF51735 1333 1496 2.56E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF47336 5230 5342 1.24E-22 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3978 4106 5.0E-14 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2260 2364 5.0E-13 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 5707 5822 2.9E-13 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 504 635 6.8E-14 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.40.50.11460 1335 1496 1.3E-42 T 14-10-2018 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 386 501 3.3E-43 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2140 2255 3.6E-43 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3857 3972 2.5E-42 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 5586 5701 5.1E-42 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF53901 5324 5698 6.36E-99 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00823 Phosphopantetheine attachment site 3507 3579 9.9E-33 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00823 Phosphopantetheine attachment site 1789 1861 1.5E-31 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00823 Phosphopantetheine attachment site 35 107 1.4E-21 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00823 Phosphopantetheine attachment site 5235 5307 6.6E-32 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SMART SM00823 Phosphopantetheine attachment site 6959 7031 2.8E-27 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF52151 5855 6140 2.28E-69 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 5491 5507 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF47336 35 142 9.81E-19 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 3762 3778 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF53901 125 491 1.13E-102 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 SUPERFAMILY SSF51735 1505 1754 2.15E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF00698 Acyl transferase domain 673 996 1.0E-48 T 14-10-2018 IPR014043 Acyl transferase Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF00698 Acyl transferase domain 4141 4457 2.6E-81 T 14-10-2018 IPR014043 Acyl transferase Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF00698 Acyl transferase domain 5858 6147 3.9E-59 T 14-10-2018 IPR014043 Acyl transferase Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Pfam PF00698 Acyl transferase domain 2420 2736 7.0E-77 T 14-10-2018 IPR014043 Acyl transferase Amir_2695 c350cb247b4a21bac8b076d115ce4aac 7110 Gene3D G3DSA:3.30.70.3290 585 1027 3.4E-155 T 14-10-2018 Amir_1959 dcddc8f12a9ddbcd57043bdd27fc75ea 213 SUPERFAMILY SSF48498 93 190 4.58E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_1959 dcddc8f12a9ddbcd57043bdd27fc75ea 213 SUPERFAMILY SSF46689 13 91 2.62E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_1959 dcddc8f12a9ddbcd57043bdd27fc75ea 213 Gene3D G3DSA:1.10.357.10 10 194 5.0E-33 T 14-10-2018 Amir_1959 dcddc8f12a9ddbcd57043bdd27fc75ea 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 73 2.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3144 cc7a40047c95b408786482f04259bd8e 501 SUPERFAMILY SSF52091 408 489 5.49E-13 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3144 cc7a40047c95b408786482f04259bd8e 501 Gene3D G3DSA:3.30.750.24 400 494 1.6E-29 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3144 cc7a40047c95b408786482f04259bd8e 501 Pfam PF00916 Sulfate permease family 28 154 1.8E-21 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Amir_3144 cc7a40047c95b408786482f04259bd8e 501 Pfam PF00916 Sulfate permease family 176 348 2.0E-26 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Amir_3144 cc7a40047c95b408786482f04259bd8e 501 Pfam PF01740 STAS domain 410 487 2.2E-7 T 14-10-2018 IPR002645 STAS domain Amir_2845 b43000f4ce515e8b06da7d18d83d3fdb 217 Pfam PF07729 FCD domain 84 206 3.1E-22 T 14-10-2018 IPR011711 GntR, C-terminal Amir_2845 b43000f4ce515e8b06da7d18d83d3fdb 217 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 71 3.8E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2845 b43000f4ce515e8b06da7d18d83d3fdb 217 SMART SM00895 84 207 2.6E-23 T 14-10-2018 IPR011711 GntR, C-terminal Amir_2845 b43000f4ce515e8b06da7d18d83d3fdb 217 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.2E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2845 b43000f4ce515e8b06da7d18d83d3fdb 217 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.2E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2845 b43000f4ce515e8b06da7d18d83d3fdb 217 SUPERFAMILY SSF46785 13 100 3.75E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2845 b43000f4ce515e8b06da7d18d83d3fdb 217 SMART SM00345 17 74 1.3E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2845 b43000f4ce515e8b06da7d18d83d3fdb 217 Gene3D G3DSA:1.20.120.530 78 215 2.4E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_2845 b43000f4ce515e8b06da7d18d83d3fdb 217 SUPERFAMILY SSF48008 79 214 8.89E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_2845 b43000f4ce515e8b06da7d18d83d3fdb 217 Gene3D G3DSA:1.10.10.10 3 75 1.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 SUPERFAMILY SSF51419 49 307 1.15E-71 T 14-10-2018 IPR029066 PLP-binding barrel Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 306 394 6.9E-17 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 Gene3D G3DSA:2.40.37.10 37 433 3.8E-141 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 Gene3D G3DSA:3.20.20.10 57 305 3.8E-141 T 14-10-2018 IPR029066 PLP-binding barrel Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 38 437 38.872 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 295 314 2.4E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 98 110 2.4E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 210 223 2.4E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 394 407 2.4E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 96 2.4E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 58 305 6.2E-58 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 PRINTS PR01181 Diaminopimelate decarboxylase signature 323 341 3.4E-24 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 PRINTS PR01181 Diaminopimelate decarboxylase signature 404 426 3.4E-24 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 PRINTS PR01181 Diaminopimelate decarboxylase signature 182 191 3.4E-24 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 PRINTS PR01181 Diaminopimelate decarboxylase signature 96 113 3.4E-24 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 SUPERFAMILY SSF50621 283 436 2.72E-47 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Amir_3234 ba74f8089eef3f6824b0e3ddc757dae4 437 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 29 437 8.1E-121 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_7055 6546cbe2353160efa8a815585ec4bb28 219 Gene3D G3DSA:3.40.50.12740 4 213 3.5E-57 T 14-10-2018 Amir_7055 6546cbe2353160efa8a815585ec4bb28 219 SMART SM00448 4 117 2.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_7055 6546cbe2353160efa8a815585ec4bb28 219 Pfam PF00072 Response regulator receiver domain 6 118 3.8E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_7055 6546cbe2353160efa8a815585ec4bb28 219 SUPERFAMILY SSF52172 1 123 1.21E-28 T 14-10-2018 IPR011006 CheY-like superfamily Amir_7055 6546cbe2353160efa8a815585ec4bb28 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 5.0E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_7055 6546cbe2353160efa8a815585ec4bb28 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 5.0E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_7055 6546cbe2353160efa8a815585ec4bb28 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 5.0E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_7055 6546cbe2353160efa8a815585ec4bb28 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_7055 6546cbe2353160efa8a815585ec4bb28 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 208 7.9E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_7055 6546cbe2353160efa8a815585ec4bb28 219 SMART SM00421 151 208 1.5E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_7055 6546cbe2353160efa8a815585ec4bb28 219 SUPERFAMILY SSF46894 146 213 8.16E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4448 ff37dddb85d3415e8571602cefc58f3a 165 SUPERFAMILY SSF50475 4 156 2.06E-50 T 14-10-2018 Amir_4448 ff37dddb85d3415e8571602cefc58f3a 165 SMART SM00903 13 156 1.0E-56 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amir_4448 ff37dddb85d3415e8571602cefc58f3a 165 Gene3D G3DSA:2.30.110.10 2 162 3.6E-56 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_4448 ff37dddb85d3415e8571602cefc58f3a 165 Pfam PF01613 Flavin reductase like domain 13 156 5.6E-40 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amir_2046 78f0976e02e24219f668eb94abb27ac5 481 SUPERFAMILY SSF69864 190 437 1.31E-74 T 14-10-2018 Amir_2046 78f0976e02e24219f668eb94abb27ac5 481 Gene3D G3DSA:1.10.287.400 377 440 5.9E-28 T 14-10-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amir_2046 78f0976e02e24219f668eb94abb27ac5 481 Gene3D G3DSA:3.90.1260.10 74 367 1.2E-113 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amir_2046 78f0976e02e24219f668eb94abb27ac5 481 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amir_2046 78f0976e02e24219f668eb94abb27ac5 481 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 5.4E-139 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amir_2046 78f0976e02e24219f668eb94abb27ac5 481 Pfam PF00764 Arginosuccinate synthase 16 404 4.4E-56 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amir_2046 78f0976e02e24219f668eb94abb27ac5 481 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amir_2046 78f0976e02e24219f668eb94abb27ac5 481 Gene3D G3DSA:3.40.50.620 14 191 1.2E-113 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_2046 78f0976e02e24219f668eb94abb27ac5 481 SUPERFAMILY SSF52402 4 185 1.54E-30 T 14-10-2018 Amir_2046 78f0976e02e24219f668eb94abb27ac5 481 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 472 76.839 T 14-10-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amir_4275 d290000b8dbba28ef3ceaf6c691001c7 894 Gene3D G3DSA:1.10.10.10 803 883 3.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4275 d290000b8dbba28ef3ceaf6c691001c7 894 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 831 845 1.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4275 d290000b8dbba28ef3ceaf6c691001c7 894 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 845 861 1.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4275 d290000b8dbba28ef3ceaf6c691001c7 894 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 861 873 1.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4275 d290000b8dbba28ef3ceaf6c691001c7 894 Pfam PF13191 AAA ATPase domain 11 167 2.1E-22 T 14-10-2018 Amir_4275 d290000b8dbba28ef3ceaf6c691001c7 894 ProSitePatterns PS00622 LuxR-type HTH domain signature. 845 872 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4275 d290000b8dbba28ef3ceaf6c691001c7 894 SUPERFAMILY SSF52540 11 226 1.45E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4275 d290000b8dbba28ef3ceaf6c691001c7 894 SMART SM00421 828 885 1.4E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4275 d290000b8dbba28ef3ceaf6c691001c7 894 Pfam PF00196 Bacterial regulatory proteins, luxR family 830 881 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4275 d290000b8dbba28ef3ceaf6c691001c7 894 SUPERFAMILY SSF46894 821 881 5.1E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4204 b3f7af4c6223f807347dc9cd96ec7508 415 Gene3D G3DSA:3.90.1150.10 8 406 4.5E-109 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_4204 b3f7af4c6223f807347dc9cd96ec7508 415 SUPERFAMILY SSF53383 9 410 6.43E-106 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_4204 b3f7af4c6223f807347dc9cd96ec7508 415 PIRSF PIRSF000521 119 158 0.044 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_4204 b3f7af4c6223f807347dc9cd96ec7508 415 PIRSF PIRSF000521 4 126 4.5E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_4204 b3f7af4c6223f807347dc9cd96ec7508 415 PIRSF PIRSF000521 181 413 7.0E-32 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_4204 b3f7af4c6223f807347dc9cd96ec7508 415 Pfam PF00202 Aminotransferase class-III 15 409 2.3E-75 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_4204 b3f7af4c6223f807347dc9cd96ec7508 415 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 6 411 6.5E-187 T 14-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 Amir_4204 b3f7af4c6223f807347dc9cd96ec7508 415 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 231 267 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_4204 b3f7af4c6223f807347dc9cd96ec7508 415 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 6 413 3.5E-130 T 14-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 Amir_4204 b3f7af4c6223f807347dc9cd96ec7508 415 Gene3D G3DSA:3.40.640.10 53 313 4.5E-109 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_3564 ed0b8799cba0ea919f993b85cb2f5a00 1060 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 406 416 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_3564 ed0b8799cba0ea919f993b85cb2f5a00 1060 Pfam PF00082 Subtilase family 199 455 1.7E-62 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_3564 ed0b8799cba0ea919f993b85cb2f5a00 1060 SUPERFAMILY SSF52743 181 464 4.84E-86 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_3564 ed0b8799cba0ea919f993b85cb2f5a00 1060 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 204 215 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_3564 ed0b8799cba0ea919f993b85cb2f5a00 1060 Gene3D G3DSA:3.40.50.200 174 466 1.2E-94 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_3564 ed0b8799cba0ea919f993b85cb2f5a00 1060 PRINTS PR00723 Subtilisin serine protease family (S8) signature 199 218 6.3E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_3564 ed0b8799cba0ea919f993b85cb2f5a00 1060 PRINTS PR00723 Subtilisin serine protease family (S8) signature 405 421 6.3E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_3564 ed0b8799cba0ea919f993b85cb2f5a00 1060 PRINTS PR00723 Subtilisin serine protease family (S8) signature 236 249 6.3E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_3512 333222cbba1006a6562d31853805678b 383 Pfam PF00067 Cytochrome P450 238 330 4.3E-20 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3512 333222cbba1006a6562d31853805678b 383 SUPERFAMILY SSF48264 9 363 1.26E-37 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3512 333222cbba1006a6562d31853805678b 383 Gene3D G3DSA:1.10.630.10 1 352 2.6E-35 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_5238 b1c95a57dbec35943c13415589730a7f 199 ProSitePatterns PS00856 Guanylate kinase-like signature. 49 66 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 Amir_5238 b1c95a57dbec35943c13415589730a7f 199 Gene3D G3DSA:3.30.63.10 46 105 2.8E-61 T 14-10-2018 Amir_5238 b1c95a57dbec35943c13415589730a7f 199 SUPERFAMILY SSF52540 14 193 8.89E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5238 b1c95a57dbec35943c13415589730a7f 199 Pfam PF00625 Guanylate kinase 15 191 1.5E-41 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Amir_5238 b1c95a57dbec35943c13415589730a7f 199 Hamap MF_00328 Guanylate kinase [gmk]. 13 196 33.999 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Amir_5238 b1c95a57dbec35943c13415589730a7f 199 Gene3D G3DSA:3.40.50.300 19 191 2.8E-61 T 14-10-2018 Amir_5238 b1c95a57dbec35943c13415589730a7f 199 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 16 192 3.1E-65 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Amir_5238 b1c95a57dbec35943c13415589730a7f 199 SMART SM00072 14 196 7.1E-65 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Amir_5790 e2ee3bca2771e804055a12b9e2dfcd6f 265 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 103 1.0E-7 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Amir_5790 e2ee3bca2771e804055a12b9e2dfcd6f 265 SUPERFAMILY SSF57716 219 261 4.56E-8 T 14-10-2018 Amir_5790 e2ee3bca2771e804055a12b9e2dfcd6f 265 Gene3D G3DSA:3.20.190.10 2 123 7.7E-24 T 14-10-2018 IPR035937 MutM-like, N-terminal Amir_5790 e2ee3bca2771e804055a12b9e2dfcd6f 265 SMART SM01232 123 213 9.5E-19 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Amir_5790 e2ee3bca2771e804055a12b9e2dfcd6f 265 SUPERFAMILY SSF81624 2 124 7.29E-23 T 14-10-2018 IPR035937 MutM-like, N-terminal Amir_5790 e2ee3bca2771e804055a12b9e2dfcd6f 265 Gene3D G3DSA:1.10.8.50 124 261 7.4E-29 T 14-10-2018 Amir_5790 e2ee3bca2771e804055a12b9e2dfcd6f 265 ProSitePatterns PS01242 Zinc finger FPG-type signature. 232 260 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 Amir_5790 e2ee3bca2771e804055a12b9e2dfcd6f 265 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 123 198 1.5E-10 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Amir_5790 e2ee3bca2771e804055a12b9e2dfcd6f 265 SMART SM00898 2 105 8.8E-14 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Amir_5790 e2ee3bca2771e804055a12b9e2dfcd6f 265 SUPERFAMILY SSF46946 122 196 8.83E-16 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Amir_1427 9d7960f8e56cfa135c6fbd6faf96d7be 249 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 53 61 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Amir_1427 9d7960f8e56cfa135c6fbd6faf96d7be 249 SUPERFAMILY SSF46548 123 220 3.14E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amir_1427 9d7960f8e56cfa135c6fbd6faf96d7be 249 Gene3D G3DSA:1.10.1060.10 107 231 7.2E-16 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amir_1427 9d7960f8e56cfa135c6fbd6faf96d7be 249 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 105 2.4E-26 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_1427 9d7960f8e56cfa135c6fbd6faf96d7be 249 Pfam PF13183 4Fe-4S dicluster domain 140 216 3.8E-14 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amir_1427 9d7960f8e56cfa135c6fbd6faf96d7be 249 SUPERFAMILY SSF54292 6 103 7.47E-23 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amir_1427 9d7960f8e56cfa135c6fbd6faf96d7be 249 Gene3D G3DSA:3.10.20.30 3 103 2.4E-26 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Amir_1427 9d7960f8e56cfa135c6fbd6faf96d7be 249 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 17 219 3.8E-43 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_4068 12ce508cd2560050adc1e2a9adff3818 594 SMART SM00387 479 591 1.1E-46 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4068 12ce508cd2560050adc1e2a9adff3818 594 SMART SM00304 317 369 8.5E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_4068 12ce508cd2560050adc1e2a9adff3818 594 Gene3D G3DSA:1.10.287.130 369 433 1.6E-12 T 14-10-2018 Amir_4068 12ce508cd2560050adc1e2a9adff3818 594 SUPERFAMILY SSF158472 318 362 1.44E-7 T 14-10-2018 Amir_4068 12ce508cd2560050adc1e2a9adff3818 594 Pfam PF00672 HAMP domain 318 362 7.8E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_4068 12ce508cd2560050adc1e2a9adff3818 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 530 2.3E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4068 12ce508cd2560050adc1e2a9adff3818 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 544 2.3E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4068 12ce508cd2560050adc1e2a9adff3818 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 588 2.3E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4068 12ce508cd2560050adc1e2a9adff3818 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 569 2.3E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4068 12ce508cd2560050adc1e2a9adff3818 594 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 590 1.8E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4068 12ce508cd2560050adc1e2a9adff3818 594 SUPERFAMILY SSF47384 353 435 7.46E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_4068 12ce508cd2560050adc1e2a9adff3818 594 Gene3D G3DSA:3.30.565.10 443 592 2.8E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4068 12ce508cd2560050adc1e2a9adff3818 594 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 434 3.8E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_4068 12ce508cd2560050adc1e2a9adff3818 594 SMART SM00388 370 434 3.3E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_4068 12ce508cd2560050adc1e2a9adff3818 594 SUPERFAMILY SSF55874 423 589 9.82E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4068 12ce508cd2560050adc1e2a9adff3818 594 Gene3D G3DSA:1.20.1480.50 293 368 3.0E-8 T 14-10-2018 Amir_3748 d8ce71e6be075e86de3e22c7047d0c79 350 SUPERFAMILY SSF46689 292 339 3.81E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3748 d8ce71e6be075e86de3e22c7047d0c79 350 SMART SM00342 256 338 4.3E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_3748 d8ce71e6be075e86de3e22c7047d0c79 350 Pfam PF12833 Helix-turn-helix domain 262 338 7.5E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_3748 d8ce71e6be075e86de3e22c7047d0c79 350 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 32 213 1.1E-39 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal Amir_3748 d8ce71e6be075e86de3e22c7047d0c79 350 Gene3D G3DSA:1.10.10.60 241 345 1.3E-20 T 14-10-2018 Amir_2365 921596e75c22729a589ef4201c313ac6 147 Gene3D G3DSA:1.10.10.10 7 140 7.9E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2365 921596e75c22729a589ef4201c313ac6 147 Pfam PF12802 MarR family 31 88 2.2E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2365 921596e75c22729a589ef4201c313ac6 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.3E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2365 921596e75c22729a589ef4201c313ac6 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 1.3E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2365 921596e75c22729a589ef4201c313ac6 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 1.3E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2365 921596e75c22729a589ef4201c313ac6 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 1.3E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2365 921596e75c22729a589ef4201c313ac6 147 SUPERFAMILY SSF46785 11 138 3.11E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2365 921596e75c22729a589ef4201c313ac6 147 SMART SM00347 26 125 8.8E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_6265 a555d6f66b4e35051357d051be8bcb60 548 Hamap MF_00577 Urocanate hydratase [hutU]. 1 545 49.558 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amir_6265 a555d6f66b4e35051357d051be8bcb60 548 ProSitePatterns PS01233 Urocanase signature. 431 446 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amir_6265 a555d6f66b4e35051357d051be8bcb60 548 Pfam PF17391 Urocanase N-terminal domain 2 128 3.4E-57 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amir_6265 a555d6f66b4e35051357d051be8bcb60 548 TIGRFAM TIGR01228 hutU: urocanate hydratase 2 543 4.0E-280 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amir_6265 a555d6f66b4e35051357d051be8bcb60 548 Gene3D G3DSA:3.40.1770.10 7 531 9.9E-245 T 14-10-2018 Amir_6265 a555d6f66b4e35051357d051be8bcb60 548 SUPERFAMILY SSF111326 2 543 4.19E-246 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amir_6265 a555d6f66b4e35051357d051be8bcb60 548 Pfam PF01175 Urocanase Rossmann-like domain 131 338 8.1E-84 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amir_6265 a555d6f66b4e35051357d051be8bcb60 548 Pfam PF17392 Urocanase C-terminal domain 341 535 5.6E-95 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amir_6265 a555d6f66b4e35051357d051be8bcb60 548 Gene3D G3DSA:3.40.50.10730 132 338 9.9E-245 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amir_6265 a555d6f66b4e35051357d051be8bcb60 548 PIRSF PIRSF001423 1 547 3.0E-275 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amir_3062 ea3bd5db96482d6d77cff7d24278162e 217 PRINTS PR00088 Haem oxygenase signature 6 31 4.6E-26 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 Amir_3062 ea3bd5db96482d6d77cff7d24278162e 217 PRINTS PR00088 Haem oxygenase signature 66 91 4.6E-26 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 Amir_3062 ea3bd5db96482d6d77cff7d24278162e 217 PRINTS PR00088 Haem oxygenase signature 118 139 4.6E-26 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 Amir_3062 ea3bd5db96482d6d77cff7d24278162e 217 PRINTS PR00088 Haem oxygenase signature 41 66 4.6E-26 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 Amir_3062 ea3bd5db96482d6d77cff7d24278162e 217 PRINTS PR00088 Haem oxygenase signature 192 210 4.6E-26 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 Amir_3062 ea3bd5db96482d6d77cff7d24278162e 217 PIRSF PIRSF000343 2 216 6.4E-61 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 Amir_3062 ea3bd5db96482d6d77cff7d24278162e 217 Gene3D G3DSA:1.20.910.10 1 214 2.7E-61 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Amir_3062 ea3bd5db96482d6d77cff7d24278162e 217 SUPERFAMILY SSF48613 5 209 4.11E-56 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Amir_3062 ea3bd5db96482d6d77cff7d24278162e 217 Pfam PF01126 Heme oxygenase 6 205 3.5E-50 T 14-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 Amir_2120 b262d4409c548c2f0672877296de64de 198 Gene3D G3DSA:1.10.357.10 3 195 6.1E-57 T 14-10-2018 Amir_2120 b262d4409c548c2f0672877296de64de 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_2120 b262d4409c548c2f0672877296de64de 198 SUPERFAMILY SSF48498 100 194 4.97E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_2120 b262d4409c548c2f0672877296de64de 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 7.6E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2120 b262d4409c548c2f0672877296de64de 198 SUPERFAMILY SSF46689 3 74 1.28E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2120 b262d4409c548c2f0672877296de64de 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 9.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2120 b262d4409c548c2f0672877296de64de 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 9.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1351 7397e803ef612f6320d663da243c79b8 456 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 454 1.2E-142 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Amir_1351 7397e803ef612f6320d663da243c79b8 456 SUPERFAMILY SSF51905 3 327 2.89E-61 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1351 7397e803ef612f6320d663da243c79b8 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 6.5E-38 T 14-10-2018 Amir_1351 7397e803ef612f6320d663da243c79b8 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 6.5E-38 T 14-10-2018 Amir_1351 7397e803ef612f6320d663da243c79b8 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.5E-38 T 14-10-2018 Amir_1351 7397e803ef612f6320d663da243c79b8 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 6.5E-38 T 14-10-2018 Amir_1351 7397e803ef612f6320d663da243c79b8 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 6.5E-38 T 14-10-2018 Amir_1351 7397e803ef612f6320d663da243c79b8 456 Gene3D G3DSA:3.50.50.60 144 261 6.8E-110 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1351 7397e803ef612f6320d663da243c79b8 456 Gene3D G3DSA:3.30.390.30 336 454 3.2E-31 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amir_1351 7397e803ef612f6320d663da243c79b8 456 SUPERFAMILY SSF55424 334 454 8.25E-29 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amir_1351 7397e803ef612f6320d663da243c79b8 456 Gene3D G3DSA:3.50.50.60 7 322 6.8E-110 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1351 7397e803ef612f6320d663da243c79b8 456 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 317 6.3E-74 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_1351 7397e803ef612f6320d663da243c79b8 456 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 337 443 2.9E-23 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Amir_1351 7397e803ef612f6320d663da243c79b8 456 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Amir_1351 7397e803ef612f6320d663da243c79b8 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 4.4E-66 T 14-10-2018 Amir_1351 7397e803ef612f6320d663da243c79b8 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 4.4E-66 T 14-10-2018 Amir_1351 7397e803ef612f6320d663da243c79b8 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 4.4E-66 T 14-10-2018 Amir_1351 7397e803ef612f6320d663da243c79b8 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.4E-66 T 14-10-2018 Amir_1351 7397e803ef612f6320d663da243c79b8 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 4.4E-66 T 14-10-2018 Amir_1351 7397e803ef612f6320d663da243c79b8 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 438 4.4E-66 T 14-10-2018 Amir_1351 7397e803ef612f6320d663da243c79b8 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 396 411 4.4E-66 T 14-10-2018 Amir_1351 7397e803ef612f6320d663da243c79b8 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 333 354 4.4E-66 T 14-10-2018 Amir_1351 7397e803ef612f6320d663da243c79b8 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 4.4E-66 T 14-10-2018 Amir_1351 7397e803ef612f6320d663da243c79b8 456 PIRSF PIRSF000350 2 427 1.4E-70 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 Gene3D G3DSA:1.10.1030.10 409 550 1.2E-37 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 Gene3D G3DSA:3.40.50.20 1 116 2.1E-48 T 14-10-2018 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 Gene3D G3DSA:3.40.50.20 555 668 3.5E-47 T 14-10-2018 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 SUPERFAMILY SSF56059 679 954 1.47E-94 T 14-10-2018 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 SUPERFAMILY SSF52440 1 127 1.19E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 424 544 3.7E-37 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1072 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 Gene3D G3DSA:3.30.470.20 671 956 2.4E-105 T 14-10-2018 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 Gene3D G3DSA:3.30.470.20 120 402 1.2E-119 T 14-10-2018 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 Pfam PF02142 MGS-like domain 977 1063 3.0E-19 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 SUPERFAMILY SSF56059 128 400 1.08E-102 T 14-10-2018 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 Gene3D G3DSA:3.40.50.1380 957 1096 8.5E-40 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 715 729 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 4.9E-61 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 4.9E-61 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 4.9E-61 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 4.9E-61 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 4.9E-61 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 4.9E-61 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 4.9E-61 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 SMART SM00851 976 1063 3.4E-31 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 679 881 8.3E-35 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.0E-67 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 SUPERFAMILY SSF52440 559 680 3.17E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1084 12.956 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 SUPERFAMILY SSF48108 396 549 3.01E-41 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 SUPERFAMILY SSF52335 963 1091 1.44E-35 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 844 851 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_5241 41d523a0294a7da7df3f619d89e7e641 1099 SMART SM01096 421 544 4.9E-59 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_2221 c01560f32f282151b430bef2189d932a 256 Gene3D G3DSA:3.10.129.90 15 254 1.9E-14 T 14-10-2018 Amir_2221 c01560f32f282151b430bef2189d932a 256 Pfam PF13622 Thioesterase-like superfamily 22 253 1.6E-33 T 14-10-2018 Amir_2221 c01560f32f282151b430bef2189d932a 256 SUPERFAMILY SSF54637 114 254 2.41E-8 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_5746 35fd69127ed8efe6939e15d41d960156 310 SUPERFAMILY SSF55174 16 67 3.53E-5 T 14-10-2018 Amir_5746 35fd69127ed8efe6939e15d41d960156 310 SUPERFAMILY SSF55120 79 307 5.6E-71 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_5746 35fd69127ed8efe6939e15d41d960156 310 Pfam PF00849 RNA pseudouridylate synthase 91 245 2.1E-33 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_5746 35fd69127ed8efe6939e15d41d960156 310 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 307 2.4E-84 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_5746 35fd69127ed8efe6939e15d41d960156 310 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_5746 35fd69127ed8efe6939e15d41d960156 310 Gene3D G3DSA:3.10.290.10 6 70 1.1E-7 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amir_5746 35fd69127ed8efe6939e15d41d960156 310 Gene3D G3DSA:3.30.2350.10 83 310 1.4E-68 T 14-10-2018 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 Pfam PF13424 Tetratricopeptide repeat 736 801 1.6E-8 T 14-10-2018 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 Gene3D G3DSA:1.25.40.10 96 273 2.2E-44 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 SMART SM00862 17 91 1.0E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 Gene3D G3DSA:1.25.40.10 668 897 1.0E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 SMART SM00028 773 806 170.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 SMART SM00028 733 766 0.0021 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 SMART SM00028 813 846 95.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 SUPERFAMILY SSF52540 274 537 1.75E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5323 d507e557b727240d821058529aa0d8a7 1025 Pfam PF03704 Bacterial transcriptional activator domain 98 242 8.2E-40 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_5323 d507e557b727240d821058529aa0d8a7 1025 SMART SM01043 98 242 3.9E-46 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_5323 d507e557b727240d821058529aa0d8a7 1025 Pfam PF00931 NB-ARC domain 310 539 7.1E-9 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 Gene3D G3DSA:3.40.50.300 274 430 5.1E-26 T 14-10-2018 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 SUPERFAMILY SSF46894 2 91 1.05E-12 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 Gene3D G3DSA:1.10.10.10 1 93 2.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5323 d507e557b727240d821058529aa0d8a7 1025 SUPERFAMILY SSF48452 717 992 5.12E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 Gene3D G3DSA:1.25.40.10 911 985 1.6E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 Pfam PF00486 Transcriptional regulatory protein, C terminal 23 91 2.3E-7 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 PRINTS PR00364 Disease resistance protein signature 311 326 3.5E-9 T 14-10-2018 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 PRINTS PR00364 Disease resistance protein signature 567 583 3.5E-9 T 14-10-2018 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 PRINTS PR00364 Disease resistance protein signature 387 401 3.5E-9 T 14-10-2018 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 PRINTS PR00364 Disease resistance protein signature 470 484 3.5E-9 T 14-10-2018 Amir_5323 d507e557b727240d821058529aa0d8a7 1025 SUPERFAMILY SSF48452 94 262 1.29E-34 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_1523 64560a429402e863fe10eccf9825bdd1 411 Gene3D G3DSA:3.40.50.150 219 409 5.5E-48 T 14-10-2018 Amir_1523 64560a429402e863fe10eccf9825bdd1 411 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 335 408 1.2E-9 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Amir_1523 64560a429402e863fe10eccf9825bdd1 411 Gene3D G3DSA:3.40.50.150 78 139 3.5E-5 T 14-10-2018 Amir_1523 64560a429402e863fe10eccf9825bdd1 411 Gene3D G3DSA:2.40.50.140 2 77 3.9E-21 T 14-10-2018 Amir_1523 64560a429402e863fe10eccf9825bdd1 411 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 392 402 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site Amir_1523 64560a429402e863fe10eccf9825bdd1 411 SUPERFAMILY SSF50249 10 69 2.4E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_1523 64560a429402e863fe10eccf9825bdd1 411 SUPERFAMILY SSF53335 70 409 5.35E-51 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_1789 24a028cf3979fa255a0aeb18ebe2a6a8 343 Gene3D G3DSA:3.40.50.2300 68 320 1.4E-69 T 14-10-2018 Amir_1789 24a028cf3979fa255a0aeb18ebe2a6a8 343 Gene3D G3DSA:1.10.260.40 13 67 6.1E-22 T 14-10-2018 Amir_1789 24a028cf3979fa255a0aeb18ebe2a6a8 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 17 61 4.4E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1789 24a028cf3979fa255a0aeb18ebe2a6a8 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 17 35 - T 14-10-2018 Amir_1789 24a028cf3979fa255a0aeb18ebe2a6a8 343 SUPERFAMILY SSF53822 87 342 8.83E-65 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_1789 24a028cf3979fa255a0aeb18ebe2a6a8 343 SUPERFAMILY SSF47413 16 70 1.64E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1789 24a028cf3979fa255a0aeb18ebe2a6a8 343 SMART SM00354 14 84 1.5E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1789 24a028cf3979fa255a0aeb18ebe2a6a8 343 Pfam PF13377 Periplasmic binding protein-like domain 185 342 2.3E-34 T 14-10-2018 Amir_1789 24a028cf3979fa255a0aeb18ebe2a6a8 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 26 36 3.9E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1789 24a028cf3979fa255a0aeb18ebe2a6a8 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 3.9E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1789 24a028cf3979fa255a0aeb18ebe2a6a8 343 Gene3D G3DSA:3.40.50.2300 176 303 1.4E-69 T 14-10-2018 Amir_2709 45ddb0cd49678e69680be8274752e62f 192 Gene3D G3DSA:1.10.10.60 6 56 3.3E-12 T 14-10-2018 Amir_2709 45ddb0cd49678e69680be8274752e62f 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 7.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2709 45ddb0cd49678e69680be8274752e62f 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 7.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2709 45ddb0cd49678e69680be8274752e62f 192 SUPERFAMILY SSF48498 81 176 2.0E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_2709 45ddb0cd49678e69680be8274752e62f 192 SUPERFAMILY SSF46689 5 75 2.0E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2709 45ddb0cd49678e69680be8274752e62f 192 Gene3D G3DSA:1.10.357.10 57 182 1.7E-16 T 14-10-2018 Amir_2709 45ddb0cd49678e69680be8274752e62f 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 55 7.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_7028 21e2a02938951e3acd9326f7a2faf5d0 386 Pfam PF07690 Major Facilitator Superfamily 14 339 8.2E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_7028 21e2a02938951e3acd9326f7a2faf5d0 386 PRINTS PR01035 Tetracycline resistance protein signature 161 181 1.3E-11 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_7028 21e2a02938951e3acd9326f7a2faf5d0 386 PRINTS PR01035 Tetracycline resistance protein signature 19 35 1.3E-11 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_7028 21e2a02938951e3acd9326f7a2faf5d0 386 PRINTS PR01035 Tetracycline resistance protein signature 133 155 1.3E-11 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_7028 21e2a02938951e3acd9326f7a2faf5d0 386 PRINTS PR01035 Tetracycline resistance protein signature 286 307 1.3E-11 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_7028 21e2a02938951e3acd9326f7a2faf5d0 386 Gene3D G3DSA:1.20.1250.20 4 365 3.6E-49 T 14-10-2018 Amir_7028 21e2a02938951e3acd9326f7a2faf5d0 386 SUPERFAMILY SSF103473 5 367 1.57E-51 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_5673 39b411a991006c43386d995a09c4fa32 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 22 32 3.4E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_5673 39b411a991006c43386d995a09c4fa32 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 3.4E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_5673 39b411a991006c43386d995a09c4fa32 343 Gene3D G3DSA:3.40.50.2300 64 319 8.6E-62 T 14-10-2018 Amir_5673 39b411a991006c43386d995a09c4fa32 343 SUPERFAMILY SSF53822 83 342 4.52E-57 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_5673 39b411a991006c43386d995a09c4fa32 343 Gene3D G3DSA:3.40.50.2300 174 303 8.6E-62 T 14-10-2018 Amir_5673 39b411a991006c43386d995a09c4fa32 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 57 2.1E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_5673 39b411a991006c43386d995a09c4fa32 343 Pfam PF13377 Periplasmic binding protein-like domain 182 342 1.1E-29 T 14-10-2018 Amir_5673 39b411a991006c43386d995a09c4fa32 343 SMART SM00354 10 80 8.0E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_5673 39b411a991006c43386d995a09c4fa32 343 SUPERFAMILY SSF47413 10 68 4.88E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_5673 39b411a991006c43386d995a09c4fa32 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 14-10-2018 Amir_5673 39b411a991006c43386d995a09c4fa32 343 Gene3D G3DSA:1.10.260.40 2 63 2.9E-22 T 14-10-2018 Amir_0521 d1cba5599b1235bc8021cbe6dac48cb0 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.5E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0521 d1cba5599b1235bc8021cbe6dac48cb0 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.5E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0521 d1cba5599b1235bc8021cbe6dac48cb0 188 Pfam PF16859 Bacterial transcriptional repressor C-terminal 70 180 7.0E-22 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Amir_0521 d1cba5599b1235bc8021cbe6dac48cb0 188 Gene3D G3DSA:1.10.10.60 1 50 3.6E-18 T 14-10-2018 Amir_0521 d1cba5599b1235bc8021cbe6dac48cb0 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 1.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0521 d1cba5599b1235bc8021cbe6dac48cb0 188 SUPERFAMILY SSF48498 70 184 2.82E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_0521 d1cba5599b1235bc8021cbe6dac48cb0 188 Gene3D G3DSA:1.10.357.10 51 187 5.2E-22 T 14-10-2018 Amir_0521 d1cba5599b1235bc8021cbe6dac48cb0 188 SUPERFAMILY SSF46689 1 66 2.98E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3683 a05ddf37d25087a7982c35e664012d17 1059 Gene3D G3DSA:3.40.50.12780 446 839 5.1E-112 T 14-10-2018 Amir_3683 a05ddf37d25087a7982c35e664012d17 1059 Pfam PF13193 AMP-binding enzyme C-terminal domain 853 928 1.3E-5 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3683 a05ddf37d25087a7982c35e664012d17 1059 Pfam PF00550 Phosphopantetheine attachment site 958 1021 3.5E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3683 a05ddf37d25087a7982c35e664012d17 1059 Pfam PF00501 AMP-binding enzyme 462 845 2.4E-81 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3683 a05ddf37d25087a7982c35e664012d17 1059 SUPERFAMILY SSF52777 13 184 1.33E-40 T 14-10-2018 Amir_3683 a05ddf37d25087a7982c35e664012d17 1059 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 481 869 6.3E-112 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3683 a05ddf37d25087a7982c35e664012d17 1059 Gene3D G3DSA:3.30.559.30 188 436 5.3E-104 T 14-10-2018 Amir_3683 a05ddf37d25087a7982c35e664012d17 1059 SUPERFAMILY SSF56801 450 969 3.27E-131 T 14-10-2018 Amir_3683 a05ddf37d25087a7982c35e664012d17 1059 Pfam PF00668 Condensation domain 10 441 5.9E-67 T 14-10-2018 IPR001242 Condensation domain Amir_3683 a05ddf37d25087a7982c35e664012d17 1059 Gene3D G3DSA:1.10.1200.10 945 1027 3.4E-20 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3683 a05ddf37d25087a7982c35e664012d17 1059 SUPERFAMILY SSF52777 189 431 3.11E-52 T 14-10-2018 Amir_3683 a05ddf37d25087a7982c35e664012d17 1059 Gene3D G3DSA:3.30.559.10 13 373 5.3E-104 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3683 a05ddf37d25087a7982c35e664012d17 1059 Gene3D G3DSA:3.30.300.30 840 944 4.1E-27 T 14-10-2018 Amir_3683 a05ddf37d25087a7982c35e664012d17 1059 ProSitePatterns PS00455 Putative AMP-binding domain signature. 597 608 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3683 a05ddf37d25087a7982c35e664012d17 1059 SUPERFAMILY SSF47336 949 1021 1.7E-15 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3046 82e569feef5c1d251bc746bb73456d08 676 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 6 206 1.3E-23 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal Amir_3046 82e569feef5c1d251bc746bb73456d08 676 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 540 556 5.8E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3046 82e569feef5c1d251bc746bb73456d08 676 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 587 604 5.8E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3046 82e569feef5c1d251bc746bb73456d08 676 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 419 436 5.8E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3046 82e569feef5c1d251bc746bb73456d08 676 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 634 654 5.8E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3046 82e569feef5c1d251bc746bb73456d08 676 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 492 503 5.8E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3046 82e569feef5c1d251bc746bb73456d08 676 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 566 585 5.8E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3046 82e569feef5c1d251bc746bb73456d08 676 SUPERFAMILY SSF53639 5 211 1.49E-29 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Amir_3046 82e569feef5c1d251bc746bb73456d08 676 SMART SM01007 6 208 1.3E-32 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal Amir_3046 82e569feef5c1d251bc746bb73456d08 676 SUPERFAMILY SSF51735 407 673 1.58E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3046 82e569feef5c1d251bc746bb73456d08 676 Gene3D G3DSA:3.40.225.10 5 213 2.6E-50 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Amir_3046 82e569feef5c1d251bc746bb73456d08 676 Gene3D G3DSA:3.40.50.720 398 673 3.5E-60 T 14-10-2018 Amir_3046 82e569feef5c1d251bc746bb73456d08 676 TIGRFAM TIGR02632 RhaD_aldol-ADH: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase 5 676 0.0 T 14-10-2018 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase Amir_3046 82e569feef5c1d251bc746bb73456d08 676 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 424 670 6.3E-45 T 14-10-2018 Amir_4429 c7fa59caad5711e84720d5d068eb0547 296 Gene3D G3DSA:1.10.10.10 11 96 4.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4429 c7fa59caad5711e84720d5d068eb0547 296 SUPERFAMILY SSF53850 103 275 3.04E-16 T 14-10-2018 Amir_4429 c7fa59caad5711e84720d5d068eb0547 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 5.0E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4429 c7fa59caad5711e84720d5d068eb0547 296 SUPERFAMILY SSF46785 11 95 2.82E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4429 c7fa59caad5711e84720d5d068eb0547 296 Gene3D G3DSA:3.40.190.10 111 286 3.5E-24 T 14-10-2018 Amir_4429 c7fa59caad5711e84720d5d068eb0547 296 Pfam PF03466 LysR substrate binding domain 111 286 1.6E-18 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_4429 c7fa59caad5711e84720d5d068eb0547 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 3.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4429 c7fa59caad5711e84720d5d068eb0547 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 3.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4429 c7fa59caad5711e84720d5d068eb0547 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 3.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4429 c7fa59caad5711e84720d5d068eb0547 296 Gene3D G3DSA:3.40.190.10 168 269 3.5E-24 T 14-10-2018 Amir_2911 7f20f422963228b84310edb102f1af0b 658 Gene3D G3DSA:3.60.40.10 337 576 2.7E-50 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_2911 7f20f422963228b84310edb102f1af0b 658 Gene3D G3DSA:3.30.450.40 181 336 7.9E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_2911 7f20f422963228b84310edb102f1af0b 658 SUPERFAMILY SSF55781 202 343 2.09E-7 T 14-10-2018 Amir_2911 7f20f422963228b84310edb102f1af0b 658 SMART SM00331 360 576 1.4E-32 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_2911 7f20f422963228b84310edb102f1af0b 658 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 390 576 2.0E-37 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_2911 7f20f422963228b84310edb102f1af0b 658 SUPERFAMILY SSF81606 377 575 1.28E-7 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3591 7af650eef886656f0197e3eb5823ffd4 255 Pfam PF02361 Cobalt transport protein 13 217 1.9E-27 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Amir_3591 7af650eef886656f0197e3eb5823ffd4 255 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 22 215 1.0E-36 T 14-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 Amir_1055 46baa314149f1469c9969102bdd06c4a 542 Pfam PF00005 ABC transporter 22 184 5.1E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1055 46baa314149f1469c9969102bdd06c4a 542 SUPERFAMILY SSF52540 362 539 5.75E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1055 46baa314149f1469c9969102bdd06c4a 542 SMART SM00382 29 229 8.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1055 46baa314149f1469c9969102bdd06c4a 542 SMART SM00382 371 538 2.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1055 46baa314149f1469c9969102bdd06c4a 542 Pfam PF12848 ABC transporter 226 330 1.6E-5 T 14-10-2018 IPR032781 ABC-transporter extension domain Amir_1055 46baa314149f1469c9969102bdd06c4a 542 Gene3D G3DSA:3.40.50.300 310 541 7.3E-38 T 14-10-2018 Amir_1055 46baa314149f1469c9969102bdd06c4a 542 Gene3D G3DSA:3.40.50.300 10 286 1.6E-56 T 14-10-2018 Amir_1055 46baa314149f1469c9969102bdd06c4a 542 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_1055 46baa314149f1469c9969102bdd06c4a 542 SUPERFAMILY SSF52540 5 237 8.98E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1055 46baa314149f1469c9969102bdd06c4a 542 Pfam PF00005 ABC transporter 364 492 5.8E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5761 02af1fdbe90371287aa3c3ea082198d4 240 Pfam PF03799 Cell division protein FtsQ 125 223 1.4E-7 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB Amir_5761 02af1fdbe90371287aa3c3ea082198d4 240 Pfam PF08478 POTRA domain, FtsQ-type 55 121 1.7E-15 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type Amir_5761 02af1fdbe90371287aa3c3ea082198d4 240 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 26 240 16.32 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 Amir_3982 3f23bf048dd1a946c0b6cb0a7f76ad1d 341 PIRSF PIRSF006769 239 324 2.1E-12 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Amir_3982 3f23bf048dd1a946c0b6cb0a7f76ad1d 341 PIRSF PIRSF006769 1 251 6.4E-91 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Amir_3982 3f23bf048dd1a946c0b6cb0a7f76ad1d 341 Gene3D G3DSA:3.40.140.10 2 140 6.3E-40 T 14-10-2018 Amir_3982 3f23bf048dd1a946c0b6cb0a7f76ad1d 341 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 101 1.9E-15 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Amir_3982 3f23bf048dd1a946c0b6cb0a7f76ad1d 341 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 90 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Amir_3982 3f23bf048dd1a946c0b6cb0a7f76ad1d 341 Gene3D G3DSA:3.40.430.10 245 328 1.8E-16 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_3982 3f23bf048dd1a946c0b6cb0a7f76ad1d 341 Gene3D G3DSA:3.40.430.10 141 244 3.6E-31 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_3982 3f23bf048dd1a946c0b6cb0a7f76ad1d 341 Pfam PF01872 RibD C-terminal domain 148 309 1.5E-41 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Amir_3982 3f23bf048dd1a946c0b6cb0a7f76ad1d 341 SUPERFAMILY SSF53927 5 143 7.72E-40 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Amir_3982 3f23bf048dd1a946c0b6cb0a7f76ad1d 341 SUPERFAMILY SSF53597 145 326 4.58E-46 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_3982 3f23bf048dd1a946c0b6cb0a7f76ad1d 341 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 323 1.1E-88 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Amir_3338 86dd012fcabd073b67dc8a01b723fac7 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 15 58 3.3E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_3338 86dd012fcabd073b67dc8a01b723fac7 341 Gene3D G3DSA:3.40.50.2300 78 315 2.5E-71 T 14-10-2018 Amir_3338 86dd012fcabd073b67dc8a01b723fac7 341 Pfam PF13377 Periplasmic binding protein-like domain 175 336 4.1E-39 T 14-10-2018 Amir_3338 86dd012fcabd073b67dc8a01b723fac7 341 SMART SM00354 13 78 4.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_3338 86dd012fcabd073b67dc8a01b723fac7 341 SUPERFAMILY SSF53822 69 339 4.87E-72 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_3338 86dd012fcabd073b67dc8a01b723fac7 341 Gene3D G3DSA:1.10.260.40 5 65 1.3E-16 T 14-10-2018 Amir_3338 86dd012fcabd073b67dc8a01b723fac7 341 SUPERFAMILY SSF47413 13 60 2.34E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3338 86dd012fcabd073b67dc8a01b723fac7 341 Gene3D G3DSA:3.40.50.2300 167 296 2.5E-71 T 14-10-2018 Amir_5047 c8facedba7980d335d797badeda9c586 281 Pfam PF00106 short chain dehydrogenase 6 185 2.9E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5047 c8facedba7980d335d797badeda9c586 281 SUPERFAMILY SSF51735 3 250 1.79E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5047 c8facedba7980d335d797badeda9c586 281 Gene3D G3DSA:3.40.50.720 2 280 1.2E-69 T 14-10-2018 Amir_5047 c8facedba7980d335d797badeda9c586 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 7.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5047 c8facedba7980d335d797badeda9c586 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 7.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5047 c8facedba7980d335d797badeda9c586 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 7.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5047 c8facedba7980d335d797badeda9c586 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.4E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5047 c8facedba7980d335d797badeda9c586 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 6.4E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5047 c8facedba7980d335d797badeda9c586 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 6.4E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5047 c8facedba7980d335d797badeda9c586 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 6.4E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5047 c8facedba7980d335d797badeda9c586 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 6.4E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5047 c8facedba7980d335d797badeda9c586 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 6.4E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3075 ad96b7466ea44882c94875385541c266 437 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 238 275 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_3075 ad96b7466ea44882c94875385541c266 437 Pfam PF00202 Aminotransferase class-III 24 430 4.8E-81 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_3075 ad96b7466ea44882c94875385541c266 437 Gene3D G3DSA:3.90.1150.10 26 426 3.8E-123 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_3075 ad96b7466ea44882c94875385541c266 437 Gene3D G3DSA:3.40.640.10 55 321 3.8E-123 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_3075 ad96b7466ea44882c94875385541c266 437 SUPERFAMILY SSF53383 22 431 9.85E-104 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_3075 ad96b7466ea44882c94875385541c266 437 PIRSF PIRSF000521 20 135 1.8E-4 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_3075 ad96b7466ea44882c94875385541c266 437 PIRSF PIRSF000521 185 435 1.3E-15 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_0974 ce019f0b0c6c12ddefb29460588a548d 106 Pfam PF05336 L-rhamnose mutarotase 3 105 2.4E-27 T 14-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 Amir_0974 ce019f0b0c6c12ddefb29460588a548d 106 Gene3D G3DSA:3.30.70.100 1 96 1.4E-27 T 14-10-2018 Amir_0974 ce019f0b0c6c12ddefb29460588a548d 106 SUPERFAMILY SSF54909 1 106 5.23E-31 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_3490 bf71214d5cc16c2b12a85e05adeac336 315 SUPERFAMILY SSF51735 106 233 6.03E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3490 bf71214d5cc16c2b12a85e05adeac336 315 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 83 1.9E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_3490 bf71214d5cc16c2b12a85e05adeac336 315 SMART SM00829 10 313 1.8E-35 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_3490 bf71214d5cc16c2b12a85e05adeac336 315 Gene3D G3DSA:3.90.180.10 11 309 7.1E-97 T 14-10-2018 Amir_3490 bf71214d5cc16c2b12a85e05adeac336 315 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 135 156 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Amir_3490 bf71214d5cc16c2b12a85e05adeac336 315 Gene3D G3DSA:3.40.50.720 118 259 7.1E-97 T 14-10-2018 Amir_3490 bf71214d5cc16c2b12a85e05adeac336 315 SUPERFAMILY SSF50129 1 144 3.8E-37 T 14-10-2018 IPR011032 GroES-like superfamily Amir_3490 bf71214d5cc16c2b12a85e05adeac336 315 Pfam PF00107 Zinc-binding dehydrogenase 146 258 6.9E-24 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 SMART SM00091 569 636 2.3E-8 T 14-10-2018 IPR000014 PAS domain Amir_2370 907f3181ceca24b451b6464be92aac89 1433 SMART SM00387 818 936 2.2E-42 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2370 907f3181ceca24b451b6464be92aac89 1433 Gene3D G3DSA:3.40.50.12740 953 1095 2.5E-26 T 14-10-2018 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 Gene3D G3DSA:3.40.50.12740 1099 1244 2.1E-41 T 14-10-2018 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 SUPERFAMILY SSF52172 951 1076 2.56E-27 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2370 907f3181ceca24b451b6464be92aac89 1433 SUPERFAMILY SSF47226 1303 1412 2.88E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 818 935 1.1E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2370 907f3181ceca24b451b6464be92aac89 1433 Gene3D G3DSA:3.30.450.20 558 681 1.4E-26 T 14-10-2018 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 SUPERFAMILY SSF52172 1098 1222 6.83E-38 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2370 907f3181ceca24b451b6464be92aac89 1433 Pfam PF00989 PAS fold 570 683 3.6E-13 T 14-10-2018 IPR013767 PAS fold GO:0006355 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 SUPERFAMILY SSF47384 692 772 1.43E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 Gene3D G3DSA:1.10.287.130 682 769 2.3E-28 T 14-10-2018 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 Pfam PF02743 Cache domain 281 514 2.4E-23 T 14-10-2018 IPR033479 Double Cache domain 1 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 SUPERFAMILY SSF55785 580 694 9.6E-26 T 14-10-2018 IPR035965 PAS domain superfamily Amir_2370 907f3181ceca24b451b6464be92aac89 1433 Pfam PF00072 Response regulator receiver domain 1102 1214 1.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 Pfam PF00072 Response regulator receiver domain 955 1071 8.3E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 SMART SM00388 706 771 3.7E-26 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 Gene3D G3DSA:3.30.565.10 770 936 1.1E-53 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2370 907f3181ceca24b451b6464be92aac89 1433 Gene3D G3DSA:3.30.450.20 278 429 3.4E-20 T 14-10-2018 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 567 693 2.8E-23 T 14-10-2018 IPR000014 PAS domain Amir_2370 907f3181ceca24b451b6464be92aac89 1433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 706 771 2.0E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 SMART SM00448 953 1071 6.6E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 SMART SM00448 1100 1214 9.4E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 Gene3D G3DSA:1.20.120.160 1303 1412 1.3E-14 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 SUPERFAMILY SSF55874 760 937 2.23E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2370 907f3181ceca24b451b6464be92aac89 1433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 861 875 3.9E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 896 914 3.9E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 879 889 3.9E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2370 907f3181ceca24b451b6464be92aac89 1433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 920 933 3.9E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2323 1b8a6f31263b8d9c818189c0f04436ce 545 Pfam PF12729 Four helix bundle sensory module for signal transduction 27 188 7.7E-10 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Amir_2323 1b8a6f31263b8d9c818189c0f04436ce 545 SUPERFAMILY SSF58104 250 544 9.94E-66 T 14-10-2018 Amir_2323 1b8a6f31263b8d9c818189c0f04436ce 545 Pfam PF00672 HAMP domain 230 278 7.2E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_2323 1b8a6f31263b8d9c818189c0f04436ce 545 SMART SM00304 230 282 1.1E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_2323 1b8a6f31263b8d9c818189c0f04436ce 545 SMART SM00304 415 478 59.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_2323 1b8a6f31263b8d9c818189c0f04436ce 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 349 527 7.1E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_2323 1b8a6f31263b8d9c818189c0f04436ce 545 SMART SM00283 290 544 4.3E-53 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_2323 1b8a6f31263b8d9c818189c0f04436ce 545 Gene3D G3DSA:1.10.287.950 230 545 3.0E-67 T 14-10-2018 Amir_2323 1b8a6f31263b8d9c818189c0f04436ce 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 417 446 4.6E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_2323 1b8a6f31263b8d9c818189c0f04436ce 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 36 61 4.6E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_2323 1b8a6f31263b8d9c818189c0f04436ce 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 388 415 4.6E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_3569 5016ef6cc770167872768ac9eef0c404 484 Gene3D G3DSA:2.115.10.20 1 289 6.7E-92 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3569 5016ef6cc770167872768ac9eef0c404 484 Pfam PF04616 Glycosyl hydrolases family 43 3 274 2.9E-83 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Amir_3569 5016ef6cc770167872768ac9eef0c404 484 SUPERFAMILY SSF49899 289 478 3.96E-23 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_3569 5016ef6cc770167872768ac9eef0c404 484 Gene3D G3DSA:2.60.120.200 290 480 2.2E-32 T 14-10-2018 Amir_3569 5016ef6cc770167872768ac9eef0c404 484 SUPERFAMILY SSF75005 4 289 8.99E-89 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_1851 a891b6d70aac71eb3ad0e7dee76e4e48 132 SUPERFAMILY SSF54593 10 130 1.65E-14 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_1851 a891b6d70aac71eb3ad0e7dee76e4e48 132 Gene3D G3DSA:3.10.180.10 11 131 6.5E-14 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_4013 8ef9c47dcdff9734307e0daf5c50dce0 266 Pfam PF00561 alpha/beta hydrolase fold 22 125 1.9E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4013 8ef9c47dcdff9734307e0daf5c50dce0 266 SUPERFAMILY SSF53474 7 264 1.49E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4013 8ef9c47dcdff9734307e0daf5c50dce0 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 2.4E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4013 8ef9c47dcdff9734307e0daf5c50dce0 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 209 223 2.4E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4013 8ef9c47dcdff9734307e0daf5c50dce0 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 2.4E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4013 8ef9c47dcdff9734307e0daf5c50dce0 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 2.4E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4013 8ef9c47dcdff9734307e0daf5c50dce0 266 Gene3D G3DSA:3.40.50.1820 4 265 3.5E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2191 be36c274743f8c9cb6d7e561859585f3 605 Pfam PF01341 Glycosyl hydrolases family 6 196 554 2.5E-86 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2191 be36c274743f8c9cb6d7e561859585f3 605 PIRSF PIRSF001100 14 605 1.1E-111 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2191 be36c274743f8c9cb6d7e561859585f3 605 Gene3D G3DSA:3.20.20.40 176 605 3.3E-163 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 Amir_2191 be36c274743f8c9cb6d7e561859585f3 605 PRINTS PR00733 Glycosyl hydrolase family 6 signature 531 545 4.2E-27 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2191 be36c274743f8c9cb6d7e561859585f3 605 PRINTS PR00733 Glycosyl hydrolase family 6 signature 357 370 4.2E-27 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2191 be36c274743f8c9cb6d7e561859585f3 605 PRINTS PR00733 Glycosyl hydrolase family 6 signature 467 480 4.2E-27 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2191 be36c274743f8c9cb6d7e561859585f3 605 PRINTS PR00733 Glycosyl hydrolase family 6 signature 196 215 4.2E-27 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2191 be36c274743f8c9cb6d7e561859585f3 605 PRINTS PR00733 Glycosyl hydrolase family 6 signature 285 300 4.2E-27 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2191 be36c274743f8c9cb6d7e561859585f3 605 PRINTS PR00733 Glycosyl hydrolase family 6 signature 508 528 4.2E-27 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2191 be36c274743f8c9cb6d7e561859585f3 605 SUPERFAMILY SSF51989 177 605 2.88E-95 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 Amir_2191 be36c274743f8c9cb6d7e561859585f3 605 SMART SM00637 42 142 8.5E-38 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_2191 be36c274743f8c9cb6d7e561859585f3 605 ProSitePatterns PS00655 Glycosyl hydrolases family 6 signature 1. 258 274 - T 14-10-2018 IPR001524 Glycoside hydrolase, family 6, conserved site GO:0004553|GO:0005975 Amir_2191 be36c274743f8c9cb6d7e561859585f3 605 Pfam PF00553 Cellulose binding domain 42 142 1.2E-26 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_2191 be36c274743f8c9cb6d7e561859585f3 605 Gene3D G3DSA:2.60.40.290 35 145 2.3E-32 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_2191 be36c274743f8c9cb6d7e561859585f3 605 SUPERFAMILY SSF49384 39 143 1.33E-28 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_0874 d0b16a8becfd7f04b99fa82403882c89 289 Gene3D G3DSA:3.30.200.20 18 91 6.1E-10 T 14-10-2018 Amir_0874 d0b16a8becfd7f04b99fa82403882c89 289 PIRSF PIRSF006221 36 287 6.3E-52 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 Amir_0874 d0b16a8becfd7f04b99fa82403882c89 289 Pfam PF03881 Fructosamine kinase 56 281 1.7E-37 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 Amir_0874 d0b16a8becfd7f04b99fa82403882c89 289 SUPERFAMILY SSF56112 39 277 1.75E-36 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_0874 d0b16a8becfd7f04b99fa82403882c89 289 Gene3D G3DSA:1.10.510.10 102 252 5.0E-59 T 14-10-2018 Amir_0874 d0b16a8becfd7f04b99fa82403882c89 289 Gene3D G3DSA:1.20.1270.240 124 276 5.0E-59 T 14-10-2018 Amir_4308 35bf6dfce140cd1006f10c0c8508daab 253 SUPERFAMILY SSF53474 11 232 2.7E-17 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4308 35bf6dfce140cd1006f10c0c8508daab 253 Gene3D G3DSA:3.40.50.1820 6 233 1.8E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4884 f7c03d3ff3825bc117db762ce833ba06 260 Pfam PF09339 IclR helix-turn-helix domain 11 60 1.4E-12 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_4884 f7c03d3ff3825bc117db762ce833ba06 260 SUPERFAMILY SSF55781 93 255 4.51E-35 T 14-10-2018 Amir_4884 f7c03d3ff3825bc117db762ce833ba06 260 Pfam PF01614 Bacterial transcriptional regulator 128 251 2.1E-20 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Amir_4884 f7c03d3ff3825bc117db762ce833ba06 260 SMART SM00346 8 98 3.4E-8 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_4884 f7c03d3ff3825bc117db762ce833ba06 260 Gene3D G3DSA:1.10.10.10 6 82 8.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4884 f7c03d3ff3825bc117db762ce833ba06 260 Gene3D G3DSA:3.30.450.40 90 257 7.6E-37 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_4884 f7c03d3ff3825bc117db762ce833ba06 260 SUPERFAMILY SSF46785 8 80 7.59E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0466 100711e8da69ad5206220a2bf03530a5 157 Gene3D G3DSA:3.30.70.640 1 157 2.3E-59 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0466 100711e8da69ad5206220a2bf03530a5 157 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 149 8.1E-58 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0466 100711e8da69ad5206220a2bf03530a5 157 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 156 33.929 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0466 100711e8da69ad5206220a2bf03530a5 157 SUPERFAMILY SSF55040 11 153 1.31E-52 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0466 100711e8da69ad5206220a2bf03530a5 157 Pfam PF01967 MoaC family 15 148 2.9E-49 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 Pfam PF00575 S1 RNA binding domain 212 283 8.2E-26 T 14-10-2018 IPR003029 S1 domain GO:0003676 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 Pfam PF00575 S1 RNA binding domain 127 194 1.3E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 Pfam PF00575 S1 RNA binding domain 39 111 2.2E-16 T 14-10-2018 IPR003029 S1 domain GO:0003676 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 Pfam PF00575 S1 RNA binding domain 297 369 3.4E-24 T 14-10-2018 IPR003029 S1 domain GO:0003676 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 SUPERFAMILY SSF50249 34 136 4.92E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 SMART SM00316 127 194 1.6E-9 T 14-10-2018 IPR022967 RNA-binding domain, S1 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 SMART SM00316 213 283 3.3E-28 T 14-10-2018 IPR022967 RNA-binding domain, S1 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 SMART SM00316 298 369 6.9E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 SMART SM00316 40 111 5.1E-18 T 14-10-2018 IPR022967 RNA-binding domain, S1 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 Gene3D G3DSA:2.40.50.140 290 373 7.6E-30 T 14-10-2018 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 Gene3D G3DSA:2.40.50.140 210 289 1.8E-30 T 14-10-2018 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 SUPERFAMILY SSF50249 113 197 5.97E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 SUPERFAMILY SSF50249 283 371 9.9E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 PRINTS PR00681 Ribosomal protein S1 signature 42 60 3.4E-87 T 14-10-2018 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 PRINTS PR00681 Ribosomal protein S1 signature 178 198 3.4E-87 T 14-10-2018 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 PRINTS PR00681 Ribosomal protein S1 signature 313 332 3.4E-87 T 14-10-2018 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 PRINTS PR00681 Ribosomal protein S1 signature 108 127 3.4E-87 T 14-10-2018 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 PRINTS PR00681 Ribosomal protein S1 signature 132 148 3.4E-87 T 14-10-2018 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 PRINTS PR00681 Ribosomal protein S1 signature 60 74 3.4E-87 T 14-10-2018 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 PRINTS PR00681 Ribosomal protein S1 signature 352 370 3.4E-87 T 14-10-2018 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 PRINTS PR00681 Ribosomal protein S1 signature 149 166 3.4E-87 T 14-10-2018 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 PRINTS PR00681 Ribosomal protein S1 signature 235 256 3.4E-87 T 14-10-2018 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 Gene3D G3DSA:2.40.50.140 28 123 7.1E-24 T 14-10-2018 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 Gene3D G3DSA:2.40.50.140 124 205 2.4E-10 T 14-10-2018 Amir_5522 785f3cc916e44e1a5e08b020db597dea 495 SUPERFAMILY SSF50249 213 295 1.93E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_2764 64ff7ddc028284470d867789592768f9 683 Gene3D G3DSA:1.25.40.10 502 683 5.6E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2764 64ff7ddc028284470d867789592768f9 683 Gene3D G3DSA:1.25.40.10 270 501 2.6E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2764 64ff7ddc028284470d867789592768f9 683 Pfam PF13181 Tetratricopeptide repeat 638 666 0.096 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2764 64ff7ddc028284470d867789592768f9 683 Pfam PF13432 Tetratricopeptide repeat 448 499 2.3E-7 T 14-10-2018 Amir_2764 64ff7ddc028284470d867789592768f9 683 Pfam PF13432 Tetratricopeptide repeat 576 631 4.7E-6 T 14-10-2018 Amir_2764 64ff7ddc028284470d867789592768f9 683 Pfam PF13432 Tetratricopeptide repeat 506 570 1.7E-7 T 14-10-2018 Amir_2764 64ff7ddc028284470d867789592768f9 683 Pfam PF07721 Tetratricopeptide repeat 394 415 0.0073 T 14-10-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 Amir_2764 64ff7ddc028284470d867789592768f9 683 SUPERFAMILY SSF48452 445 667 3.79E-36 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2764 64ff7ddc028284470d867789592768f9 683 SUPERFAMILY SSF48452 313 489 3.26E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2764 64ff7ddc028284470d867789592768f9 683 SMART SM00028 468 501 0.5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2764 64ff7ddc028284470d867789592768f9 683 SMART SM00028 502 535 0.0034 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2764 64ff7ddc028284470d867789592768f9 683 SMART SM00028 638 670 16.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2764 64ff7ddc028284470d867789592768f9 683 SMART SM00028 434 467 0.012 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2764 64ff7ddc028284470d867789592768f9 683 SMART SM00028 604 637 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2764 64ff7ddc028284470d867789592768f9 683 SMART SM00028 390 423 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2764 64ff7ddc028284470d867789592768f9 683 SMART SM00028 536 569 31.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 Gene3D G3DSA:3.40.50.300 267 427 2.5E-26 T 14-10-2018 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 SMART SM00382 295 432 0.0016 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 SMART SM00028 858 891 16.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 SMART SM00028 778 811 480.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 SMART SM00028 899 932 2.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 SMART SM00028 111 144 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 SUPERFAMILY SSF46894 14 99 4.54E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 Pfam PF00931 NB-ARC domain 286 474 4.3E-11 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 SMART SM00862 26 99 1.1E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 Pfam PF03704 Bacterial transcriptional activator domain 106 251 3.0E-39 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 Gene3D G3DSA:1.25.40.10 660 845 7.7E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 Gene3D G3DSA:1.10.10.10 11 102 1.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 Gene3D G3DSA:1.25.40.10 849 988 9.8E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 Gene3D G3DSA:1.25.40.10 104 266 2.8E-47 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 PRINTS PR00364 Disease resistance protein signature 376 390 1.9E-7 T 14-10-2018 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 PRINTS PR00364 Disease resistance protein signature 461 475 1.9E-7 T 14-10-2018 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 PRINTS PR00364 Disease resistance protein signature 298 313 1.9E-7 T 14-10-2018 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 SUPERFAMILY SSF48452 854 970 3.2E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 Pfam PF00486 Transcriptional regulatory protein, C terminal 33 96 5.7E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 SUPERFAMILY SSF48452 102 268 8.3E-37 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 SUPERFAMILY SSF52540 269 528 3.37E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5275 5a015b922f5821d1da46ba2a83b30326 989 SMART SM01043 106 251 4.4E-47 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_4491 b73b9809b270faa360e08ce4465374e1 423 Pfam PF05977 Transmembrane secretion effector 8 415 1.2E-34 T 14-10-2018 IPR010290 Transmembrane secretion effector Amir_4491 b73b9809b270faa360e08ce4465374e1 423 SUPERFAMILY SSF103473 9 412 1.01E-41 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4491 b73b9809b270faa360e08ce4465374e1 423 Gene3D G3DSA:1.20.1250.20 8 408 7.0E-35 T 14-10-2018 Amir_0276 40e7709b2f946ac3683535b88f0628d7 372 Gene3D G3DSA:3.30.450.90 54 155 1.9E-17 T 14-10-2018 Amir_0276 40e7709b2f946ac3683535b88f0628d7 372 SUPERFAMILY SSF52540 39 336 2.6E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0276 40e7709b2f946ac3683535b88f0628d7 372 Gene3D G3DSA:3.40.50.300 156 370 4.7E-56 T 14-10-2018 Amir_0276 40e7709b2f946ac3683535b88f0628d7 372 Pfam PF00437 Type II/IV secretion system protein 57 330 1.2E-74 T 14-10-2018 IPR001482 Type II/IV secretion system protein Amir_0276 40e7709b2f946ac3683535b88f0628d7 372 TIGRFAM TIGR03819 heli_sec_ATPase: helicase/secretion neighborhood ATPase 5 342 1.2E-149 T 14-10-2018 IPR022399 Helicase/secretion neighbourhood ATPase Amir_2029 34873b7dcdf2915c8497e9a34e2b578e 461 Pfam PF00324 Amino acid permease 19 452 4.0E-77 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Amir_2029 34873b7dcdf2915c8497e9a34e2b578e 461 Gene3D G3DSA:1.20.1740.10 10 460 7.1E-54 T 14-10-2018 Amir_2029 34873b7dcdf2915c8497e9a34e2b578e 461 PIRSF PIRSF006060 1 459 2.6E-59 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amir_4049 78b036a6e677311dcd4ba79704ef5e0f 250 SMART SM00382 45 231 4.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4049 78b036a6e677311dcd4ba79704ef5e0f 250 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_4049 78b036a6e677311dcd4ba79704ef5e0f 250 SUPERFAMILY SSF52540 20 238 6.37E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4049 78b036a6e677311dcd4ba79704ef5e0f 250 Pfam PF00005 ABC transporter 36 182 1.1E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4049 78b036a6e677311dcd4ba79704ef5e0f 250 Gene3D G3DSA:3.40.50.300 17 247 1.4E-63 T 14-10-2018 Amir_0867 2fe7356028d627a49100aa7b29670586 202 Gene3D G3DSA:1.10.10.60 6 59 2.4E-10 T 14-10-2018 Amir_0867 2fe7356028d627a49100aa7b29670586 202 SUPERFAMILY SSF48498 82 197 2.52E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_0867 2fe7356028d627a49100aa7b29670586 202 SUPERFAMILY SSF46689 10 73 2.77E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0867 2fe7356028d627a49100aa7b29670586 202 Pfam PF16859 Bacterial transcriptional repressor C-terminal 82 191 1.9E-21 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Amir_0867 2fe7356028d627a49100aa7b29670586 202 Gene3D G3DSA:1.10.357.10 61 200 8.5E-24 T 14-10-2018 Amir_0867 2fe7356028d627a49100aa7b29670586 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 67 2.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1839 45bde4d9d6915e3b35e4036b6454a1be 528 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 6.7E-7 T 14-10-2018 Amir_1839 45bde4d9d6915e3b35e4036b6454a1be 528 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 186 211 6.7E-7 T 14-10-2018 Amir_1839 45bde4d9d6915e3b35e4036b6454a1be 528 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 158 6.7E-7 T 14-10-2018 Amir_1839 45bde4d9d6915e3b35e4036b6454a1be 528 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 186 204 5.6E-12 T 14-10-2018 Amir_1839 45bde4d9d6915e3b35e4036b6454a1be 528 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.6E-12 T 14-10-2018 Amir_1839 45bde4d9d6915e3b35e4036b6454a1be 528 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 306 322 5.6E-12 T 14-10-2018 Amir_1839 45bde4d9d6915e3b35e4036b6454a1be 528 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 5.6E-12 T 14-10-2018 Amir_1839 45bde4d9d6915e3b35e4036b6454a1be 528 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 336 358 5.6E-12 T 14-10-2018 Amir_1839 45bde4d9d6915e3b35e4036b6454a1be 528 Gene3D G3DSA:3.50.50.60 2 390 1.9E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1839 45bde4d9d6915e3b35e4036b6454a1be 528 SUPERFAMILY SSF51905 138 393 1.12E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1839 45bde4d9d6915e3b35e4036b6454a1be 528 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 241 4.2E-35 T 14-10-2018 Amir_1839 45bde4d9d6915e3b35e4036b6454a1be 528 SUPERFAMILY SSF51905 5 228 2.72E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1929 586aad6286b113e5dcc8e369de0ab069 280 Gene3D G3DSA:1.10.3720.10 2 271 1.9E-54 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1929 586aad6286b113e5dcc8e369de0ab069 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 268 3.3E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_1929 586aad6286b113e5dcc8e369de0ab069 280 SUPERFAMILY SSF161098 7 280 1.42E-52 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0446 3aff603d75dd2eb7173dbe2ae14a66e9 424 Gene3D G3DSA:3.40.190.10 151 418 2.5E-75 T 14-10-2018 Amir_0446 3aff603d75dd2eb7173dbe2ae14a66e9 424 SUPERFAMILY SSF53850 28 423 1.89E-68 T 14-10-2018 Amir_0446 3aff603d75dd2eb7173dbe2ae14a66e9 424 Gene3D G3DSA:3.40.190.10 55 379 2.5E-75 T 14-10-2018 Amir_0446 3aff603d75dd2eb7173dbe2ae14a66e9 424 Pfam PF13416 Bacterial extracellular solute-binding protein 56 364 1.6E-33 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_5682 abac9dfe5d84f463b8d6052d95de8aba 739 SMART SM00947 564 728 7.3E-58 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Amir_5682 abac9dfe5d84f463b8d6052d95de8aba 739 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 576 583 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Amir_5682 abac9dfe5d84f463b8d6052d95de8aba 739 SUPERFAMILY SSF53056 526 732 3.4E-55 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Amir_5682 abac9dfe5d84f463b8d6052d95de8aba 739 Gene3D G3DSA:3.40.1050.10 527 736 8.2E-63 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Amir_5682 abac9dfe5d84f463b8d6052d95de8aba 739 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 617 637 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Amir_5682 abac9dfe5d84f463b8d6052d95de8aba 739 Pfam PF00484 Carbonic anhydrase 572 724 1.5E-47 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Amir_5682 abac9dfe5d84f463b8d6052d95de8aba 739 Pfam PF00916 Sulfate permease family 27 374 1.0E-57 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Amir_6377 0629bb9523e7defda0754dfceab4b4a8 892 Pfam PF13490 Putative zinc-finger 216 250 2.8E-7 T 14-10-2018 IPR027383 Putative zinc-finger Amir_6377 0629bb9523e7defda0754dfceab4b4a8 892 Gene3D G3DSA:1.10.10.10 136 204 1.9E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6377 0629bb9523e7defda0754dfceab4b4a8 892 Gene3D G3DSA:1.10.10.1320 221 271 3.4E-6 T 14-10-2018 Amir_6377 0629bb9523e7defda0754dfceab4b4a8 892 Pfam PF04542 Sigma-70 region 2 49 117 1.5E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6377 0629bb9523e7defda0754dfceab4b4a8 892 SUPERFAMILY SSF88946 27 128 4.71E-17 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6377 0629bb9523e7defda0754dfceab4b4a8 892 Gene3D G3DSA:1.10.1740.10 28 135 1.5E-15 T 14-10-2018 Amir_6377 0629bb9523e7defda0754dfceab4b4a8 892 SUPERFAMILY SSF88659 141 201 8.41E-9 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_6377 0629bb9523e7defda0754dfceab4b4a8 892 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 45 202 1.4E-20 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_0037 7dbb46456dc16c37f55f894c7d92e583 460 Gene3D G3DSA:1.25.40.10 205 356 1.0E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0037 7dbb46456dc16c37f55f894c7d92e583 460 Gene3D G3DSA:1.10.260.40 12 83 8.7E-8 T 14-10-2018 Amir_0037 7dbb46456dc16c37f55f894c7d92e583 460 SUPERFAMILY SSF47413 32 85 1.57E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_0037 7dbb46456dc16c37f55f894c7d92e583 460 SMART SM00028 252 285 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0037 7dbb46456dc16c37f55f894c7d92e583 460 SMART SM00028 212 245 24.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0037 7dbb46456dc16c37f55f894c7d92e583 460 SMART SM00530 32 87 2.3E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_0037 7dbb46456dc16c37f55f894c7d92e583 460 Pfam PF13560 Helix-turn-helix domain 37 84 2.7E-8 T 14-10-2018 Amir_0037 7dbb46456dc16c37f55f894c7d92e583 460 SUPERFAMILY SSF48452 205 415 1.27E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_1578 4761757ba4aafb9aa866bd6876f1f30e 301 SUPERFAMILY SSF103481 199 298 3.92E-9 T 14-10-2018 Amir_1578 4761757ba4aafb9aa866bd6876f1f30e 301 SUPERFAMILY SSF103481 65 156 6.28E-6 T 14-10-2018 Amir_1578 4761757ba4aafb9aa866bd6876f1f30e 301 Pfam PF00892 EamA-like transporter family 164 293 5.1E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amir_5997 22fe55b77eb4bc9131297b349f381c53 375 PIRSF PIRSF001434 51 375 7.3E-91 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amir_5997 22fe55b77eb4bc9131297b349f381c53 375 Gene3D G3DSA:3.40.640.10 30 254 6.6E-57 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_5997 22fe55b77eb4bc9131297b349f381c53 375 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 60 374 1.3E-72 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amir_5997 22fe55b77eb4bc9131297b349f381c53 375 SUPERFAMILY SSF53383 57 374 6.83E-78 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_5997 22fe55b77eb4bc9131297b349f381c53 375 Gene3D G3DSA:3.90.1150.10 255 375 2.8E-25 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_1104 20fff4a19fc9beb3a0d2321a2f66a6ed 79 Pfam PF16827 zinc-finger 6 67 4.1E-24 T 14-10-2018 IPR031795 Putative zinc-finger containing protein Amir_0618 6c86134104548191e4e57cc9f608ef0f 266 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Amir_0618 6c86134104548191e4e57cc9f608ef0f 266 Gene3D G3DSA:1.10.10.10 3 114 8.4E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0618 6c86134104548191e4e57cc9f608ef0f 266 Pfam PF00455 DeoR C terminal sensor domain 78 235 1.5E-48 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain Amir_0618 6c86134104548191e4e57cc9f608ef0f 266 SMART SM01134 74 236 1.8E-61 T 14-10-2018 Amir_0618 6c86134104548191e4e57cc9f608ef0f 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.4E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_0618 6c86134104548191e4e57cc9f608ef0f 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.4E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_0618 6c86134104548191e4e57cc9f608ef0f 266 SMART SM00420 6 58 7.1E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_0618 6c86134104548191e4e57cc9f608ef0f 266 SUPERFAMILY SSF100950 76 236 9.1E-32 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Amir_0618 6c86134104548191e4e57cc9f608ef0f 266 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 6.3E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_0618 6c86134104548191e4e57cc9f608ef0f 266 SUPERFAMILY SSF46785 5 60 4.85E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4183 be48b0ff126147c3355f0571a43025ef 549 Gene3D G3DSA:1.25.40.10 283 407 1.3E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4183 be48b0ff126147c3355f0571a43025ef 549 SMART SM00028 499 532 81.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_4183 be48b0ff126147c3355f0571a43025ef 549 SMART SM00028 459 492 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_4183 be48b0ff126147c3355f0571a43025ef 549 SMART SM00028 379 412 83.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_4183 be48b0ff126147c3355f0571a43025ef 549 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 25 139 5.5E-16 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal Amir_4183 be48b0ff126147c3355f0571a43025ef 549 Gene3D G3DSA:3.40.1700.10 8 144 3.6E-28 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Amir_4183 be48b0ff126147c3355f0571a43025ef 549 SUPERFAMILY SSF143597 19 143 7.32E-17 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Amir_4183 be48b0ff126147c3355f0571a43025ef 549 Pfam PF13424 Tetratricopeptide repeat 421 489 1.9E-8 T 14-10-2018 Amir_4183 be48b0ff126147c3355f0571a43025ef 549 SUPERFAMILY SSF48452 331 536 7.87E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4183 be48b0ff126147c3355f0571a43025ef 549 Gene3D G3DSA:1.25.40.10 408 545 2.0E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6466 b819fa8430cb2ac00c9cb440d52a6984 669 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 76 300 4.6E-39 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Amir_6466 b819fa8430cb2ac00c9cb440d52a6984 669 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 109 120 1.7E-8 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Amir_6466 b819fa8430cb2ac00c9cb440d52a6984 669 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 183 196 1.7E-8 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Amir_6466 b819fa8430cb2ac00c9cb440d52a6984 669 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 157 174 1.7E-8 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Amir_6466 b819fa8430cb2ac00c9cb440d52a6984 669 Gene3D G3DSA:3.40.710.10 48 349 1.1E-83 T 14-10-2018 Amir_6466 b819fa8430cb2ac00c9cb440d52a6984 669 SUPERFAMILY SSF56601 5 318 8.23E-53 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_1614 2e68e9990a6b977a06f47944164b46de 239 TIGRFAM TIGR00017 cmk: cytidylate kinase 9 224 6.6E-57 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Amir_1614 2e68e9990a6b977a06f47944164b46de 239 Pfam PF02224 Cytidylate kinase 10 227 4.4E-61 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Amir_1614 2e68e9990a6b977a06f47944164b46de 239 Gene3D G3DSA:3.40.50.300 5 233 5.2E-72 T 14-10-2018 Amir_1614 2e68e9990a6b977a06f47944164b46de 239 Hamap MF_00238 Cytidylate kinase [cmk]. 8 231 29.816 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Amir_1614 2e68e9990a6b977a06f47944164b46de 239 SUPERFAMILY SSF52540 9 230 1.25E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1206 fc172ad3fd613021ddcae1dde59915a0 322 Gene3D G3DSA:3.40.50.300 2 118 3.0E-9 T 14-10-2018 Amir_1206 fc172ad3fd613021ddcae1dde59915a0 322 Gene3D G3DSA:1.20.272.10 195 317 1.4E-15 T 14-10-2018 Amir_1206 fc172ad3fd613021ddcae1dde59915a0 322 SUPERFAMILY SSF48019 197 313 1.65E-11 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Amir_1206 fc172ad3fd613021ddcae1dde59915a0 322 SUPERFAMILY SSF52540 3 187 4.51E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5802 fee41f1f51a0f0526a09c87d4dfd4017 284 SMART SM00422 4 72 4.6E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_5802 fee41f1f51a0f0526a09c87d4dfd4017 284 Pfam PF13411 MerR HTH family regulatory protein 5 70 1.2E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_5802 fee41f1f51a0f0526a09c87d4dfd4017 284 SUPERFAMILY SSF46955 4 75 1.28E-14 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_5802 fee41f1f51a0f0526a09c87d4dfd4017 284 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 4.1E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_5802 fee41f1f51a0f0526a09c87d4dfd4017 284 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 4.1E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_5802 fee41f1f51a0f0526a09c87d4dfd4017 284 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 4.1E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_5802 fee41f1f51a0f0526a09c87d4dfd4017 284 Gene3D G3DSA:1.10.1660.10 6 190 3.2E-21 T 14-10-2018 Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 PIRSF PIRSF038927 59 753 3.5E-284 T 14-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 Gene3D G3DSA:3.40.50.880 593 752 8.4E-31 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 SUPERFAMILY SSF56634 75 582 3.27E-201 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 SUPERFAMILY SSF52317 601 751 4.01E-8 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 Gene3D G3DSA:2.40.180.10 14 494 1.2E-194 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 Pfam PF00199 Catalase 84 469 4.7E-165 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 414 422 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 Gene3D G3DSA:1.20.1370.20 498 590 3.3E-28 T 14-10-2018 Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 SMART SM01060 84 472 6.6E-249 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 ProSitePatterns PS00438 Catalase proximal active site signature. 120 136 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 PRINTS PR00067 Catalase signature 199 217 3.8E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 PRINTS PR00067 Catalase signature 401 427 3.8E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 PRINTS PR00067 Catalase signature 180 197 3.8E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 PRINTS PR00067 Catalase signature 97 120 3.8E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 PRINTS PR00067 Catalase signature 369 396 3.8E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 PRINTS PR00067 Catalase signature 159 177 3.8E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_2517 5132eda8a0e8ddab8af9d021cecddd8f 755 Pfam PF06628 Catalase-related immune-responsive 503 564 2.5E-20 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_5786 6ea6954d7e02309a571334109ff6c703 442 SUPERFAMILY SSF54368 16 118 5.23E-6 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_5786 6ea6954d7e02309a571334109ff6c703 442 Pfam PF00120 Glutamine synthetase, catalytic domain 121 427 1.8E-69 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_5786 6ea6954d7e02309a571334109ff6c703 442 SMART SM01230 119 359 5.0E-74 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_5786 6ea6954d7e02309a571334109ff6c703 442 Gene3D G3DSA:3.10.20.70 22 112 5.1E-7 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_5786 6ea6954d7e02309a571334109ff6c703 442 SUPERFAMILY SSF55931 120 433 6.38E-79 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amir_5786 6ea6954d7e02309a571334109ff6c703 442 Gene3D G3DSA:3.30.590.10 117 440 2.0E-94 T 14-10-2018 Amir_2262 5fa25f4083d1b65c4be401ef493f91df 430 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 251 414 8.2E-44 T 14-10-2018 IPR000160 GGDEF domain Amir_2262 5fa25f4083d1b65c4be401ef493f91df 430 Gene3D G3DSA:3.30.70.270 247 416 3.9E-49 T 14-10-2018 Amir_2262 5fa25f4083d1b65c4be401ef493f91df 430 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 412 1.2E-39 T 14-10-2018 IPR000160 GGDEF domain Amir_2262 5fa25f4083d1b65c4be401ef493f91df 430 SMART SM00267 244 416 2.7E-47 T 14-10-2018 IPR000160 GGDEF domain Amir_2262 5fa25f4083d1b65c4be401ef493f91df 430 SUPERFAMILY SSF55073 261 413 4.71E-41 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_6309 4cdfce518a7593e58c191d4d0d0bde05 801 Gene3D G3DSA:3.30.565.10 369 520 3.2E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6309 4cdfce518a7593e58c191d4d0d0bde05 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 474 2.8E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_6309 4cdfce518a7593e58c191d4d0d0bde05 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 460 2.8E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_6309 4cdfce518a7593e58c191d4d0d0bde05 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 518 2.8E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_6309 4cdfce518a7593e58c191d4d0d0bde05 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 499 2.8E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_6309 4cdfce518a7593e58c191d4d0d0bde05 801 SUPERFAMILY SSF47384 281 364 8.24E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_6309 4cdfce518a7593e58c191d4d0d0bde05 801 Pfam PF00672 HAMP domain 237 286 3.1E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_6309 4cdfce518a7593e58c191d4d0d0bde05 801 Gene3D G3DSA:1.20.1480.50 204 291 3.0E-12 T 14-10-2018 Amir_6309 4cdfce518a7593e58c191d4d0d0bde05 801 Gene3D G3DSA:1.10.287.130 292 367 3.7E-16 T 14-10-2018 Amir_6309 4cdfce518a7593e58c191d4d0d0bde05 801 SMART SM00388 297 364 1.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_6309 4cdfce518a7593e58c191d4d0d0bde05 801 Pfam PF00512 His Kinase A (phospho-acceptor) domain 298 364 1.4E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_6309 4cdfce518a7593e58c191d4d0d0bde05 801 SMART SM00304 237 289 1.4E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_6309 4cdfce518a7593e58c191d4d0d0bde05 801 SMART SM00387 410 521 6.9E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_6309 4cdfce518a7593e58c191d4d0d0bde05 801 SUPERFAMILY SSF55874 354 523 1.1E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6309 4cdfce518a7593e58c191d4d0d0bde05 801 SUPERFAMILY SSF158472 237 286 2.48E-8 T 14-10-2018 Amir_6309 4cdfce518a7593e58c191d4d0d0bde05 801 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 413 519 2.1E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_6020 bcd08afd57ad35bd2202fcd2564dd2b3 168 Gene3D G3DSA:3.30.70.260 1 79 2.7E-36 T 14-10-2018 Amir_6020 bcd08afd57ad35bd2202fcd2564dd2b3 168 SUPERFAMILY SSF55021 82 161 1.37E-24 T 14-10-2018 Amir_6020 bcd08afd57ad35bd2202fcd2564dd2b3 168 Pfam PF01842 ACT domain 4 69 3.5E-18 T 14-10-2018 IPR002912 ACT domain Amir_6020 bcd08afd57ad35bd2202fcd2564dd2b3 168 SUPERFAMILY SSF55021 2 75 6.55E-24 T 14-10-2018 Amir_6020 bcd08afd57ad35bd2202fcd2564dd2b3 168 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 4 76 1.0E-31 T 14-10-2018 Amir_6020 bcd08afd57ad35bd2202fcd2564dd2b3 168 Pfam PF10369 Small subunit of acetolactate synthase 85 158 5.4E-27 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Amir_6020 bcd08afd57ad35bd2202fcd2564dd2b3 168 Gene3D G3DSA:3.30.70.1150 84 163 1.4E-28 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Amir_6020 bcd08afd57ad35bd2202fcd2564dd2b3 168 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 158 4.4E-62 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Amir_2699 988a13a6806794467e104df50997277f 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 1.1E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2699 988a13a6806794467e104df50997277f 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 1.1E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2699 988a13a6806794467e104df50997277f 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 1.1E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2699 988a13a6806794467e104df50997277f 226 SMART SM00421 148 210 4.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2699 988a13a6806794467e104df50997277f 226 SUPERFAMILY SSF52172 2 167 1.43E-20 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2699 988a13a6806794467e104df50997277f 226 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 196 7.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2699 988a13a6806794467e104df50997277f 226 SMART SM00448 1 120 3.3E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2699 988a13a6806794467e104df50997277f 226 Pfam PF00072 Response regulator receiver domain 3 108 7.2E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2699 988a13a6806794467e104df50997277f 226 Gene3D G3DSA:3.40.50.12740 1 212 1.8E-44 T 14-10-2018 Amir_1446 cef5af59715e117ac1ccc55111bcc279 461 SMART SM00387 351 461 9.1E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_1446 cef5af59715e117ac1ccc55111bcc279 461 Gene3D G3DSA:1.10.287.130 190 309 4.6E-21 T 14-10-2018 Amir_1446 cef5af59715e117ac1ccc55111bcc279 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 307 2.8E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_1446 cef5af59715e117ac1ccc55111bcc279 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 1.6E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_1446 cef5af59715e117ac1ccc55111bcc279 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 1.6E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_1446 cef5af59715e117ac1ccc55111bcc279 461 Gene3D G3DSA:3.30.565.10 311 461 1.0E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1446 cef5af59715e117ac1ccc55111bcc279 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 454 7.2E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_1446 cef5af59715e117ac1ccc55111bcc279 461 SUPERFAMILY SSF55874 298 459 2.36E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1446 cef5af59715e117ac1ccc55111bcc279 461 SUPERFAMILY SSF47384 228 308 4.12E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_1446 cef5af59715e117ac1ccc55111bcc279 461 SMART SM00388 244 308 1.7E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_4885 e83d417c8cc5d7881b2dba00dfe1a1be 260 Gene3D G3DSA:3.40.50.1580 10 257 6.0E-59 T 14-10-2018 Amir_4885 e83d417c8cc5d7881b2dba00dfe1a1be 260 Pfam PF01048 Phosphorylase superfamily 27 247 3.7E-27 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Amir_4885 e83d417c8cc5d7881b2dba00dfe1a1be 260 SUPERFAMILY SSF53167 13 253 8.25E-50 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Amir_2551 926cf1161b8aa1e8d2f5816079911f6f 477 SUPERFAMILY SSF103473 5 458 1.26E-61 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2551 926cf1161b8aa1e8d2f5816079911f6f 477 ProSitePatterns PS00217 Sugar transport proteins signature 2. 107 132 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Amir_2551 926cf1161b8aa1e8d2f5816079911f6f 477 Gene3D G3DSA:1.20.1720.10 12 206 1.0E-50 T 14-10-2018 Amir_2551 926cf1161b8aa1e8d2f5816079911f6f 477 Pfam PF07690 Major Facilitator Superfamily 17 193 5.9E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2551 926cf1161b8aa1e8d2f5816079911f6f 477 Pfam PF07690 Major Facilitator Superfamily 276 454 8.3E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2551 926cf1161b8aa1e8d2f5816079911f6f 477 Gene3D G3DSA:1.20.1250.20 266 461 2.6E-18 T 14-10-2018 Amir_2551 926cf1161b8aa1e8d2f5816079911f6f 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 5.0E-8 T 14-10-2018 Amir_2551 926cf1161b8aa1e8d2f5816079911f6f 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 5.0E-8 T 14-10-2018 Amir_2551 926cf1161b8aa1e8d2f5816079911f6f 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 5.0E-8 T 14-10-2018 Amir_6269 8871b35fabfe96ce3381c9344cba415c 243 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 215 2.6E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_6269 8871b35fabfe96ce3381c9344cba415c 243 Gene3D G3DSA:1.10.3720.10 22 212 7.8E-24 T 14-10-2018 IPR035906 MetI-like superfamily Amir_6269 8871b35fabfe96ce3381c9344cba415c 243 SUPERFAMILY SSF161098 25 204 1.83E-31 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3988 5f868600796ee805649c5315a00c96f6 285 Gene3D G3DSA:3.40.50.720 2 267 1.1E-29 T 14-10-2018 Amir_3988 5f868600796ee805649c5315a00c96f6 285 Pfam PF00106 short chain dehydrogenase 6 164 1.9E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3988 5f868600796ee805649c5315a00c96f6 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3988 5f868600796ee805649c5315a00c96f6 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3988 5f868600796ee805649c5315a00c96f6 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 5.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3988 5f868600796ee805649c5315a00c96f6 285 SUPERFAMILY SSF51735 2 178 2.45E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3670 f02f8f51f5252cb4e92b66ae6c25402b 541 Gene3D G3DSA:3.30.420.350 122 310 4.9E-35 T 14-10-2018 Amir_3670 f02f8f51f5252cb4e92b66ae6c25402b 541 Pfam PF16861 Carbamoyltransferase C-terminus 372 536 6.0E-66 T 14-10-2018 IPR031730 Carbamoyltransferase, C-terminal Amir_3670 f02f8f51f5252cb4e92b66ae6c25402b 541 Gene3D G3DSA:3.30.420.40 19 317 4.9E-35 T 14-10-2018 Amir_3670 f02f8f51f5252cb4e92b66ae6c25402b 541 Gene3D G3DSA:3.90.870.20 336 536 1.3E-74 T 14-10-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily Amir_3670 f02f8f51f5252cb4e92b66ae6c25402b 541 Pfam PF02543 Carbamoyltransferase N-terminus 270 317 5.3E-8 T 14-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 Amir_3670 f02f8f51f5252cb4e92b66ae6c25402b 541 Pfam PF02543 Carbamoyltransferase N-terminus 16 204 1.4E-12 T 14-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 Amir_1306 caa3cdaf91d2d5a5f9d2bb2cd93afb9e 692 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 160 284 1.0E-17 T 14-10-2018 IPR000014 PAS domain Amir_1306 caa3cdaf91d2d5a5f9d2bb2cd93afb9e 692 Pfam PF08448 PAS fold 168 278 2.0E-14 T 14-10-2018 IPR013656 PAS fold-4 Amir_1306 caa3cdaf91d2d5a5f9d2bb2cd93afb9e 692 SMART SM00267 277 444 2.7E-38 T 14-10-2018 IPR000160 GGDEF domain Amir_1306 caa3cdaf91d2d5a5f9d2bb2cd93afb9e 692 Pfam PF00563 EAL domain 460 684 4.1E-25 T 14-10-2018 IPR001633 EAL domain Amir_1306 caa3cdaf91d2d5a5f9d2bb2cd93afb9e 692 SMART SM00091 162 228 3.7E-9 T 14-10-2018 IPR000014 PAS domain Amir_1306 caa3cdaf91d2d5a5f9d2bb2cd93afb9e 692 Gene3D G3DSA:3.20.20.450 457 692 8.5E-34 T 14-10-2018 IPR035919 EAL domain superfamily Amir_1306 caa3cdaf91d2d5a5f9d2bb2cd93afb9e 692 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 284 438 5.8E-28 T 14-10-2018 IPR000160 GGDEF domain Amir_1306 caa3cdaf91d2d5a5f9d2bb2cd93afb9e 692 SUPERFAMILY SSF141868 461 688 5.1E-23 T 14-10-2018 IPR035919 EAL domain superfamily Amir_1306 caa3cdaf91d2d5a5f9d2bb2cd93afb9e 692 SMART SM00052 454 691 1.3E-8 T 14-10-2018 IPR001633 EAL domain Amir_1306 caa3cdaf91d2d5a5f9d2bb2cd93afb9e 692 Gene3D G3DSA:3.30.450.20 148 274 6.5E-22 T 14-10-2018 Amir_1306 caa3cdaf91d2d5a5f9d2bb2cd93afb9e 692 SUPERFAMILY SSF55073 293 445 3.37E-30 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_1306 caa3cdaf91d2d5a5f9d2bb2cd93afb9e 692 Pfam PF00990 Diguanylate cyclase, GGDEF domain 289 438 4.5E-28 T 14-10-2018 IPR000160 GGDEF domain Amir_1306 caa3cdaf91d2d5a5f9d2bb2cd93afb9e 692 Gene3D G3DSA:3.30.70.270 275 442 2.0E-36 T 14-10-2018 Amir_1306 caa3cdaf91d2d5a5f9d2bb2cd93afb9e 692 SUPERFAMILY SSF55785 149 275 9.34E-25 T 14-10-2018 IPR035965 PAS domain superfamily Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Pfam PF08659 KR domain 1384 1562 3.2E-56 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SUPERFAMILY SSF52151 2379 2670 2.35E-65 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Gene3D G3DSA:3.40.366.10 557 856 1.8E-148 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Gene3D G3DSA:3.40.366.10 2380 2678 2.6E-141 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1692 1707 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SUPERFAMILY SSF47336 1659 1770 6.81E-27 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Pfam PF00698 Acyl transferase domain 558 872 1.4E-84 T 14-10-2018 IPR014043 Acyl transferase Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Pfam PF00698 Acyl transferase domain 2382 2694 3.9E-51 T 14-10-2018 IPR014043 Acyl transferase Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SMART SM00825 Beta-ketoacyl synthase 36 462 1.3E-222 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SMART SM00825 Beta-ketoacyl synthase 1757 2183 9.7E-210 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Gene3D G3DSA:3.30.70.3290 2303 2722 2.6E-141 T 14-10-2018 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Gene3D G3DSA:3.40.47.10 1753 2220 7.7E-194 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 412 527 1.6E-15 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2133 2191 2.0E-8 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SUPERFAMILY SSF55048 2506 2565 1.83E-8 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SMART SM00823 Phosphopantetheine attachment site 2817 2889 5.0E-31 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SMART SM00823 Phosphopantetheine attachment site 1665 1737 6.1E-31 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 197 213 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SUPERFAMILY SSF53901 1751 2128 3.88E-101 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SUPERFAMILY SSF53901 30 406 1.29E-100 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 2382 2675 1.1E-103 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 559 853 2.5E-114 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 34 284 1.8E-89 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1755 2005 6.0E-88 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Gene3D G3DSA:3.10.129.110 906 1188 3.4E-100 T 14-10-2018 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Gene3D G3DSA:1.10.1200.10 2796 2889 1.2E-35 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Gene3D G3DSA:1.10.1200.10 1645 1737 5.1E-35 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SUPERFAMILY SSF47336 2809 2896 5.89E-24 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Pfam PF00550 Phosphopantetheine attachment site 1667 1733 2.6E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Pfam PF00550 Phosphopantetheine attachment site 2819 2885 4.1E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SUPERFAMILY SSF52151 556 849 5.75E-64 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Pfam PF14765 Polyketide synthase dehydratase 917 1184 8.8E-49 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SMART SM00826 917 1077 1.8E-67 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2013 2130 8.5E-46 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 292 409 1.5E-44 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Gene3D G3DSA:3.40.47.10 25 478 4.5E-190 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1384 1564 8.5E-54 T 14-10-2018 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2844 2859 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Pfam PF08990 Erythronolide synthase docking 2 27 4.0E-8 T 14-10-2018 IPR015083 Polyketide synthase, docking domain GO:0016740|GO:0048037 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SUPERFAMILY SSF51735 1191 1334 5.12E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SUPERFAMILY SSF51735 1378 1621 5.94E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Gene3D G3DSA:3.30.70.3290 479 899 1.8E-148 T 14-10-2018 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SMART SM01294 1666 1733 2.8E-5 T 14-10-2018 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SMART SM01294 2818 2885 5.9E-8 T 14-10-2018 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 Gene3D G3DSA:3.40.50.720 1189 1633 2.2E-99 T 14-10-2018 Amir_4441 6c020f6ddf0cd9f6dd4a56c424da856e 2966 SUPERFAMILY SSF55048 683 745 1.7E-11 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_1753 eb7c18c985cc75957812515ba991c423 705 Gene3D G3DSA:3.40.50.2000 519 668 7.4E-33 T 14-10-2018 Amir_1753 eb7c18c985cc75957812515ba991c423 705 Gene3D G3DSA:3.90.550.10 2 235 1.7E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_1753 eb7c18c985cc75957812515ba991c423 705 SUPERFAMILY SSF53756 395 634 2.72E-18 T 14-10-2018 Amir_1753 eb7c18c985cc75957812515ba991c423 705 Pfam PF13692 Glycosyl transferases group 1 531 662 5.1E-10 T 14-10-2018 Amir_1753 eb7c18c985cc75957812515ba991c423 705 SUPERFAMILY SSF53448 3 247 3.58E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_1753 eb7c18c985cc75957812515ba991c423 705 Pfam PF00535 Glycosyl transferase family 2 5 120 1.3E-16 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 Gene3D G3DSA:3.20.20.80 348 713 6.7E-76 T 14-10-2018 Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 SMART SM00606 125 262 0.0016 T 14-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 Gene3D G3DSA:2.80.10.50 1007 1127 7.1E-36 T 14-10-2018 Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 SMART SM00458 910 1007 0.31 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 SMART SM00458 1008 1127 1.7E-20 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 SUPERFAMILY SSF51011 683 766 8.63E-19 T 14-10-2018 Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 Pfam PF03422 Carbohydrate binding module (family 6) 155 261 2.9E-9 T 14-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 SUPERFAMILY SSF51445 353 681 5.85E-32 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 Gene3D G3DSA:2.60.120.260 131 272 8.1E-30 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 Gene3D G3DSA:2.60.40.1180 768 887 1.9E-20 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 SUPERFAMILY SSF50370 915 997 2.08E-12 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 Pfam PF01055 Glycosyl hydrolases family 31 345 771 1.3E-76 T 14-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 Pfam PF00652 Ricin-type beta-trefoil lectin domain 1016 1124 1.1E-24 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 Gene3D G3DSA:2.60.40.1180 715 767 3.8E-10 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 SUPERFAMILY SSF49785 130 262 4.82E-19 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 Gene3D G3DSA:2.80.10.50 902 1006 4.6E-13 T 14-10-2018 Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 SUPERFAMILY SSF50370 1016 1126 8.42E-32 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_0110 ecf17a17a21110412ddc6d896de3d331 1128 Pfam PF17137 Domain of unknown function (DUF5110) 789 856 8.8E-14 T 14-10-2018 IPR033403 Domain of unknown function DUF5110 Amir_6015 dee02b555d990a1ca95673de59dfcac9 1092 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 183 194 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_6015 dee02b555d990a1ca95673de59dfcac9 1092 Gene3D G3DSA:3.40.50.200 470 673 4.0E-28 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_6015 dee02b555d990a1ca95673de59dfcac9 1092 SUPERFAMILY SSF52743 161 663 7.86E-62 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_6015 dee02b555d990a1ca95673de59dfcac9 1092 Gene3D G3DSA:3.40.50.200 154 460 1.3E-41 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_6015 dee02b555d990a1ca95673de59dfcac9 1092 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 259 269 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Amir_6015 dee02b555d990a1ca95673de59dfcac9 1092 Pfam PF00082 Subtilase family 178 654 8.2E-40 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_6015 dee02b555d990a1ca95673de59dfcac9 1092 PRINTS PR00723 Subtilisin serine protease family (S8) signature 255 268 5.8E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_6015 dee02b555d990a1ca95673de59dfcac9 1092 PRINTS PR00723 Subtilisin serine protease family (S8) signature 178 197 5.8E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_6015 dee02b555d990a1ca95673de59dfcac9 1092 PRINTS PR00723 Subtilisin serine protease family (S8) signature 599 615 5.8E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_6015 dee02b555d990a1ca95673de59dfcac9 1092 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 600 610 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_4006 742f4a54a9489853be4633cec588c2be 193 Gene3D G3DSA:1.10.10.60 7 55 9.8E-20 T 14-10-2018 Amir_4006 742f4a54a9489853be4633cec588c2be 193 Gene3D G3DSA:1.10.357.10 57 190 1.8E-22 T 14-10-2018 Amir_4006 742f4a54a9489853be4633cec588c2be 193 SUPERFAMILY SSF46689 6 71 6.98E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4006 742f4a54a9489853be4633cec588c2be 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.4E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4006 742f4a54a9489853be4633cec588c2be 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 2.4E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4006 742f4a54a9489853be4633cec588c2be 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 2.9E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4006 742f4a54a9489853be4633cec588c2be 193 Pfam PF16859 Bacterial transcriptional repressor C-terminal 74 183 1.6E-16 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Amir_4006 742f4a54a9489853be4633cec588c2be 193 SUPERFAMILY SSF48498 75 189 3.92E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3076 72dd49f8fe9415af0cf61705e5daf180 432 Pfam PF00202 Aminotransferase class-III 45 426 3.0E-119 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_3076 72dd49f8fe9415af0cf61705e5daf180 432 Gene3D G3DSA:3.90.1150.10 25 423 2.4E-154 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_3076 72dd49f8fe9415af0cf61705e5daf180 432 SUPERFAMILY SSF53383 38 427 9.21E-134 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_3076 72dd49f8fe9415af0cf61705e5daf180 432 PIRSF PIRSF000521 190 430 1.7E-43 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_3076 72dd49f8fe9415af0cf61705e5daf180 432 PIRSF PIRSF000521 145 181 0.005 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_3076 72dd49f8fe9415af0cf61705e5daf180 432 PIRSF PIRSF000521 1 153 8.2E-10 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_3076 72dd49f8fe9415af0cf61705e5daf180 432 Gene3D G3DSA:3.40.640.10 80 333 2.4E-154 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_3076 72dd49f8fe9415af0cf61705e5daf180 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 251 288 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_6731 9725f76643622d6ccfc378e907d45239 256 SUPERFAMILY SSF51735 106 228 1.97E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6731 9725f76643622d6ccfc378e907d45239 256 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 25 233 35.137 T 14-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 Amir_6731 9725f76643622d6ccfc378e907d45239 256 Pfam PF06971 Putative DNA-binding protein N-terminus 30 77 2.4E-18 T 14-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 Amir_6731 9725f76643622d6ccfc378e907d45239 256 SMART SM00881 104 204 1.6E-18 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Amir_6731 9725f76643622d6ccfc378e907d45239 256 Gene3D G3DSA:3.40.50.720 103 232 3.1E-45 T 14-10-2018 Amir_6731 9725f76643622d6ccfc378e907d45239 256 Gene3D G3DSA:1.10.10.10 23 102 8.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6731 9725f76643622d6ccfc378e907d45239 256 SUPERFAMILY SSF46785 31 103 8.43E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6731 9725f76643622d6ccfc378e907d45239 256 Pfam PF02629 CoA binding domain 106 203 6.4E-20 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Amir_0896 1b48f8e2397b6ae3ffebcd2da4ef3fd2 250 SMART SM00382 38 216 2.4E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0896 1b48f8e2397b6ae3ffebcd2da4ef3fd2 250 Pfam PF13476 AAA domain 35 69 2.9E-7 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain Amir_0896 1b48f8e2397b6ae3ffebcd2da4ef3fd2 250 SUPERFAMILY SSF52540 35 213 1.9E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0896 1b48f8e2397b6ae3ffebcd2da4ef3fd2 250 Gene3D G3DSA:3.40.50.300 109 216 4.0E-11 T 14-10-2018 Amir_0896 1b48f8e2397b6ae3ffebcd2da4ef3fd2 250 Gene3D G3DSA:3.40.50.300 28 98 8.4E-8 T 14-10-2018 Amir_5385 73d068f9a907d2b95df109d7b6048caf 251 Gene3D G3DSA:3.10.350.10 196 240 1.8E-8 T 14-10-2018 IPR036779 LysM domain superfamily Amir_5385 73d068f9a907d2b95df109d7b6048caf 251 Pfam PF01476 LysM domain 197 243 3.8E-8 T 14-10-2018 IPR018392 LysM domain Amir_5385 73d068f9a907d2b95df109d7b6048caf 251 SMART SM00257 196 243 5.4E-4 T 14-10-2018 IPR018392 LysM domain Amir_4001 f65eb41c24df620ba64709e8f23c93c8 217 SUPERFAMILY SSF52172 3 136 1.05E-29 T 14-10-2018 IPR011006 CheY-like superfamily Amir_4001 f65eb41c24df620ba64709e8f23c93c8 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 6.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4001 f65eb41c24df620ba64709e8f23c93c8 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 6.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4001 f65eb41c24df620ba64709e8f23c93c8 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 6.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4001 f65eb41c24df620ba64709e8f23c93c8 217 SUPERFAMILY SSF46894 150 216 1.46E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4001 f65eb41c24df620ba64709e8f23c93c8 217 SMART SM00421 153 210 1.5E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4001 f65eb41c24df620ba64709e8f23c93c8 217 Gene3D G3DSA:3.40.50.12740 3 216 1.3E-60 T 14-10-2018 Amir_4001 f65eb41c24df620ba64709e8f23c93c8 217 Pfam PF00072 Response regulator receiver domain 5 118 8.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4001 f65eb41c24df620ba64709e8f23c93c8 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 208 1.9E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4001 f65eb41c24df620ba64709e8f23c93c8 217 SMART SM00448 3 118 2.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4001 f65eb41c24df620ba64709e8f23c93c8 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4892 6392ce30029658624e397862c984edef 318 SMART SM00612 84 133 1.6E-4 T 14-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Amir_4892 6392ce30029658624e397862c984edef 318 SMART SM00612 32 83 1.3 T 14-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Amir_4892 6392ce30029658624e397862c984edef 318 SMART SM00612 196 244 4.5E-6 T 14-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Amir_4892 6392ce30029658624e397862c984edef 318 SMART SM00612 245 293 0.061 T 14-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Amir_4892 6392ce30029658624e397862c984edef 318 Gene3D G3DSA:2.120.10.80 1 146 9.0E-35 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Amir_4892 6392ce30029658624e397862c984edef 318 SUPERFAMILY SSF117281 8 142 3.27E-29 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Amir_4892 6392ce30029658624e397862c984edef 318 Gene3D G3DSA:2.120.10.80 147 307 1.0E-39 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Amir_4892 6392ce30029658624e397862c984edef 318 SUPERFAMILY SSF117281 160 301 2.75E-34 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Amir_4892 6392ce30029658624e397862c984edef 318 Pfam PF01344 Kelch motif 73 120 2.6E-8 T 14-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Amir_4892 6392ce30029658624e397862c984edef 318 Pfam PF01344 Kelch motif 184 231 2.7E-8 T 14-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Amir_4892 6392ce30029658624e397862c984edef 318 Pfam PF13418 Galactose oxidase, central domain 233 280 4.7E-5 T 14-10-2018 Amir_5343 22dd6e7289753d4a6596dc29c43ed021 346 Pfam PF13377 Periplasmic binding protein-like domain 180 337 2.4E-35 T 14-10-2018 Amir_5343 22dd6e7289753d4a6596dc29c43ed021 346 SUPERFAMILY SSF47413 5 64 1.97E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_5343 22dd6e7289753d4a6596dc29c43ed021 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 53 1.6E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_5343 22dd6e7289753d4a6596dc29c43ed021 346 SMART SM00354 5 76 1.7E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_5343 22dd6e7289753d4a6596dc29c43ed021 346 SUPERFAMILY SSF53822 67 340 5.81E-67 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_5343 22dd6e7289753d4a6596dc29c43ed021 346 Gene3D G3DSA:3.40.50.2300 61 317 1.4E-71 T 14-10-2018 Amir_5343 22dd6e7289753d4a6596dc29c43ed021 346 Gene3D G3DSA:3.40.50.2300 171 300 1.4E-71 T 14-10-2018 Amir_5343 22dd6e7289753d4a6596dc29c43ed021 346 Gene3D G3DSA:1.10.260.40 3 60 6.9E-20 T 14-10-2018 Amir_5343 22dd6e7289753d4a6596dc29c43ed021 346 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 14-10-2018 Amir_5472 3b927b259a369dd067fd116d698bb31d 64 Gene3D G3DSA:2.40.50.530 1 63 1.7E-22 T 14-10-2018 Amir_5472 3b927b259a369dd067fd116d698bb31d 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 1.0E-22 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Amir_5472 3b927b259a369dd067fd116d698bb31d 64 SUPERFAMILY SSF143034 2 63 4.19E-21 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5472 3b927b259a369dd067fd116d698bb31d 64 PRINTS PR00064 Ribosomal protein L35 signature 21 35 7.3E-16 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Amir_5472 3b927b259a369dd067fd116d698bb31d 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.3E-16 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Amir_5472 3b927b259a369dd067fd116d698bb31d 64 PRINTS PR00064 Ribosomal protein L35 signature 36 54 7.3E-16 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Amir_5472 3b927b259a369dd067fd116d698bb31d 64 Pfam PF01632 Ribosomal protein L35 2 62 6.3E-23 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5472 3b927b259a369dd067fd116d698bb31d 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 16.81 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Amir_1796 f06bdc7b5621a68b7fd27a7ad1191bc9 460 Gene3D G3DSA:3.30.420.40 1 228 5.1E-83 T 14-10-2018 Amir_1796 f06bdc7b5621a68b7fd27a7ad1191bc9 460 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 236 419 1.4E-24 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Amir_1796 f06bdc7b5621a68b7fd27a7ad1191bc9 460 Gene3D G3DSA:3.30.420.40 229 457 3.3E-69 T 14-10-2018 Amir_1796 f06bdc7b5621a68b7fd27a7ad1191bc9 460 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 122 134 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amir_1796 f06bdc7b5621a68b7fd27a7ad1191bc9 460 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 330 351 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amir_1796 f06bdc7b5621a68b7fd27a7ad1191bc9 460 TIGRFAM TIGR01312 XylB: xylulokinase 6 428 1.8E-115 T 14-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 Amir_1796 f06bdc7b5621a68b7fd27a7ad1191bc9 460 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 211 6.6E-42 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Amir_1796 f06bdc7b5621a68b7fd27a7ad1191bc9 460 PIRSF PIRSF000538 1 453 7.7E-74 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amir_1796 f06bdc7b5621a68b7fd27a7ad1191bc9 460 SUPERFAMILY SSF53067 4 228 2.43E-48 T 14-10-2018 Amir_1796 f06bdc7b5621a68b7fd27a7ad1191bc9 460 SUPERFAMILY SSF53067 230 451 3.79E-44 T 14-10-2018 Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 PIRSF PIRSF000109 2 479 1.9E-203 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 Gene3D G3DSA:1.10.1040.10 185 438 1.1E-101 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 Gene3D G3DSA:1.20.5.320 439 473 2.3E-17 T 14-10-2018 Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 258 270 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 SUPERFAMILY SSF51735 8 181 3.14E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 SMART SM01350 183 471 7.8E-204 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 360 382 4.4E-81 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 254 281 4.4E-81 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 71 100 4.4E-81 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 8 31 4.4E-81 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 124 149 4.4E-81 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 172 200 4.4E-81 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 176 2.4E-51 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 10 471 3.4E-208 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 SUPERFAMILY SSF48179 181 474 2.79E-117 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 Gene3D G3DSA:3.40.50.720 2 184 1.3E-57 T 14-10-2018 Amir_5683 d465d4bc2975da7535815c5a9c0f9d85 479 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 183 470 3.5E-124 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_1468 e07276c718f3205bc72b5edd5f552847 397 PRINTS PR01272 Acetoin utilisation ACUC protein signature 22 42 3.7E-9 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 Amir_1468 e07276c718f3205bc72b5edd5f552847 397 PRINTS PR01272 Acetoin utilisation ACUC protein signature 109 122 3.7E-9 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 Amir_1468 e07276c718f3205bc72b5edd5f552847 397 PRINTS PR01272 Acetoin utilisation ACUC protein signature 88 102 3.7E-9 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 Amir_1468 e07276c718f3205bc72b5edd5f552847 397 SUPERFAMILY SSF52768 10 337 2.97E-103 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily Amir_1468 e07276c718f3205bc72b5edd5f552847 397 PRINTS PR01270 Histone deacetylase superfamily signature 165 180 1.5E-18 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Amir_1468 e07276c718f3205bc72b5edd5f552847 397 PRINTS PR01270 Histone deacetylase superfamily signature 251 261 1.5E-18 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Amir_1468 e07276c718f3205bc72b5edd5f552847 397 PRINTS PR01270 Histone deacetylase superfamily signature 132 155 1.5E-18 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Amir_1468 e07276c718f3205bc72b5edd5f552847 397 Pfam PF00850 Histone deacetylase domain 28 321 5.3E-74 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Amir_1468 e07276c718f3205bc72b5edd5f552847 397 Gene3D G3DSA:3.40.800.20 11 352 8.7E-103 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Amir_4313 75f58966941cfc93d42ea71ba9e82ab7 397 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 23 106 2.2E-5 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_4313 75f58966941cfc93d42ea71ba9e82ab7 397 PIRSF PIRSF016578 134 396 3.8E-23 T 14-10-2018 Amir_4313 75f58966941cfc93d42ea71ba9e82ab7 397 PIRSF PIRSF016578 9 120 1.8E-6 T 14-10-2018 Amir_4313 75f58966941cfc93d42ea71ba9e82ab7 397 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 256 375 1.5E-14 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Amir_4313 75f58966941cfc93d42ea71ba9e82ab7 397 SUPERFAMILY SSF56645 22 232 4.06E-33 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_4313 75f58966941cfc93d42ea71ba9e82ab7 397 SUPERFAMILY SSF47203 251 392 1.61E-20 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_4313 75f58966941cfc93d42ea71ba9e82ab7 397 Gene3D G3DSA:1.10.540.10 16 116 3.2E-16 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_4313 75f58966941cfc93d42ea71ba9e82ab7 397 Gene3D G3DSA:2.40.110.10 138 232 4.4E-19 T 14-10-2018 Amir_4313 75f58966941cfc93d42ea71ba9e82ab7 397 Gene3D G3DSA:1.20.140.10 238 396 6.3E-24 T 14-10-2018 Amir_1439 8863a215c1b3a832fa177db121c416b9 272 SUPERFAMILY SSF54506 131 264 4.71E-25 T 14-10-2018 Amir_1439 8863a215c1b3a832fa177db121c416b9 272 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Amir_1439 8863a215c1b3a832fa177db121c416b9 272 SUPERFAMILY SSF54506 3 124 4.71E-36 T 14-10-2018 Amir_1439 8863a215c1b3a832fa177db121c416b9 272 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 264 8.0E-63 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Amir_1439 8863a215c1b3a832fa177db121c416b9 272 Pfam PF01678 Diaminopimelate epimerase 5 123 2.2E-37 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Amir_1439 8863a215c1b3a832fa177db121c416b9 272 Pfam PF01678 Diaminopimelate epimerase 141 258 3.4E-15 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Amir_1439 8863a215c1b3a832fa177db121c416b9 272 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 266 28.522 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Amir_1439 8863a215c1b3a832fa177db121c416b9 272 Gene3D G3DSA:3.10.310.10 126 262 1.0E-81 T 14-10-2018 Amir_1439 8863a215c1b3a832fa177db121c416b9 272 Gene3D G3DSA:3.10.310.10 5 125 1.0E-81 T 14-10-2018 Amir_2204 a2d868c13c870a02c74c085596bf6e1c 226 Pfam PF12389 Camelysin metallo-endopeptidase 25 220 3.4E-10 T 14-10-2018 IPR022121 Peptidase M73, camelysin Amir_0552 806c42381294001cfc7b9dc096503548 128 Pfam PF01638 HxlR-like helix-turn-helix 26 110 3.2E-26 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type Amir_0552 806c42381294001cfc7b9dc096503548 128 SUPERFAMILY SSF46785 6 112 1.51E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0552 806c42381294001cfc7b9dc096503548 128 Gene3D G3DSA:1.10.10.10 3 123 1.2E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1275 e8b845708f0c461c9deb5b4461a9486b 629 Gene3D G3DSA:3.90.980.10 111 243 3.3E-33 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Amir_1275 e8b845708f0c461c9deb5b4461a9486b 629 Pfam PF08278 DNA primase DnaG DnaB-binding 481 607 1.5E-23 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 Amir_1275 e8b845708f0c461c9deb5b4461a9486b 629 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 254 6.6E-34 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Amir_1275 e8b845708f0c461c9deb5b4461a9486b 629 Hamap MF_00974 DNA primase [dnaG]. 4 613 25.717 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Amir_1275 e8b845708f0c461c9deb5b4461a9486b 629 PIRSF PIRSF002811 2 619 1.2E-144 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Amir_1275 e8b845708f0c461c9deb5b4461a9486b 629 SMART SM00493 262 339 1.8E-12 T 14-10-2018 IPR006171 TOPRIM domain Amir_1275 e8b845708f0c461c9deb5b4461a9486b 629 Pfam PF01807 CHC2 zinc finger 7 101 1.8E-32 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Amir_1275 e8b845708f0c461c9deb5b4461a9486b 629 SMART SM00766 480 608 3.8E-15 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 Amir_1275 e8b845708f0c461c9deb5b4461a9486b 629 Gene3D G3DSA:3.40.1360.10 244 373 1.2E-36 T 14-10-2018 Amir_1275 e8b845708f0c461c9deb5b4461a9486b 629 Gene3D G3DSA:3.90.580.10 1 101 1.7E-35 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Amir_1275 e8b845708f0c461c9deb5b4461a9486b 629 Pfam PF10410 DnaB-helicase binding domain of primase 375 430 2.0E-17 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 Amir_1275 e8b845708f0c461c9deb5b4461a9486b 629 TIGRFAM TIGR01391 dnaG: DNA primase 5 422 2.0E-111 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Amir_1275 e8b845708f0c461c9deb5b4461a9486b 629 SUPERFAMILY SSF56731 117 430 3.4E-92 T 14-10-2018 Amir_1275 e8b845708f0c461c9deb5b4461a9486b 629 SMART SM00400 37 91 5.7E-35 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Amir_1275 e8b845708f0c461c9deb5b4461a9486b 629 Pfam PF13662 Toprim domain 263 334 2.5E-16 T 14-10-2018 IPR006171 TOPRIM domain Amir_1275 e8b845708f0c461c9deb5b4461a9486b 629 SUPERFAMILY SSF57783 4 100 1.07E-31 T 14-10-2018 Amir_4398 f957307e7509d44e44096446f65ef1cd 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 245 3.2E-57 T 14-10-2018 Amir_4398 f957307e7509d44e44096446f65ef1cd 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 182 0.0017 T 14-10-2018 Amir_4398 f957307e7509d44e44096446f65ef1cd 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4398 f957307e7509d44e44096446f65ef1cd 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4398 f957307e7509d44e44096446f65ef1cd 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4398 f957307e7509d44e44096446f65ef1cd 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4398 f957307e7509d44e44096446f65ef1cd 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4398 f957307e7509d44e44096446f65ef1cd 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4398 f957307e7509d44e44096446f65ef1cd 249 SUPERFAMILY SSF51735 5 246 5.88E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4398 f957307e7509d44e44096446f65ef1cd 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_4398 f957307e7509d44e44096446f65ef1cd 249 Gene3D G3DSA:3.40.50.720 1 249 2.4E-75 T 14-10-2018 Amir_6743 d6f74af3e4def427185227d85ab136ab 270 SUPERFAMILY SSF48179 158 265 4.08E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_6743 d6f74af3e4def427185227d85ab136ab 270 Gene3D G3DSA:3.40.50.720 1 161 2.3E-44 T 14-10-2018 Amir_6743 d6f74af3e4def427185227d85ab136ab 270 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 159 263 3.2E-36 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Amir_6743 d6f74af3e4def427185227d85ab136ab 270 SUPERFAMILY SSF51735 3 157 9.21E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6743 d6f74af3e4def427185227d85ab136ab 270 PIRSF PIRSF000193 1 266 3.4E-71 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Amir_6743 d6f74af3e4def427185227d85ab136ab 270 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 219 241 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Amir_6743 d6f74af3e4def427185227d85ab136ab 270 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 263 26.916 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Amir_6743 d6f74af3e4def427185227d85ab136ab 270 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 263 3.2E-79 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Amir_6743 d6f74af3e4def427185227d85ab136ab 270 Gene3D G3DSA:1.10.3730.10 162 267 1.0E-38 T 14-10-2018 Amir_6743 d6f74af3e4def427185227d85ab136ab 270 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 96 2.7E-19 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Amir_6551 2273f367cfa9150475223431fce807c4 450 Pfam PF13193 AMP-binding enzyme C-terminal domain 368 442 1.6E-21 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_6551 2273f367cfa9150475223431fce807c4 450 ProSitePatterns PS00455 Putative AMP-binding domain signature. 122 133 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_6551 2273f367cfa9150475223431fce807c4 450 Pfam PF00501 AMP-binding enzyme 110 358 1.3E-64 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_6551 2273f367cfa9150475223431fce807c4 450 Pfam PF00501 AMP-binding enzyme 12 99 9.6E-16 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_6551 2273f367cfa9150475223431fce807c4 450 SUPERFAMILY SSF56801 11 450 8.63E-131 T 14-10-2018 Amir_6551 2273f367cfa9150475223431fce807c4 450 Gene3D G3DSA:3.40.50.12780 3 353 6.5E-118 T 14-10-2018 Amir_6551 2273f367cfa9150475223431fce807c4 450 Gene3D G3DSA:3.30.300.310 355 450 3.0E-32 T 14-10-2018 Amir_0653 b6aaa64516f6a3ca762a73d2529e3b63 189 Pfam PF01195 Peptidyl-tRNA hydrolase 7 189 1.0E-54 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Amir_0653 b6aaa64516f6a3ca762a73d2529e3b63 189 SUPERFAMILY SSF53178 6 189 5.62E-63 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Amir_0653 b6aaa64516f6a3ca762a73d2529e3b63 189 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 182 32.875 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Amir_0653 b6aaa64516f6a3ca762a73d2529e3b63 189 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Amir_0653 b6aaa64516f6a3ca762a73d2529e3b63 189 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Amir_0653 b6aaa64516f6a3ca762a73d2529e3b63 189 Gene3D G3DSA:3.40.50.1470 3 189 5.7E-68 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Amir_0653 b6aaa64516f6a3ca762a73d2529e3b63 189 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 6 189 9.6E-56 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Amir_6235 c36d0243b287d392c6f2e2a2333d61bd 215 SMART SM00421 149 206 1.1E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6235 c36d0243b287d392c6f2e2a2333d61bd 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6235 c36d0243b287d392c6f2e2a2333d61bd 215 SUPERFAMILY SSF46894 132 212 6.46E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_6235 c36d0243b287d392c6f2e2a2333d61bd 215 Gene3D G3DSA:3.40.50.12740 2 212 7.4E-70 T 14-10-2018 Amir_6235 c36d0243b287d392c6f2e2a2333d61bd 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 205 9.8E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6235 c36d0243b287d392c6f2e2a2333d61bd 215 Pfam PF00072 Response regulator receiver domain 4 113 5.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6235 c36d0243b287d392c6f2e2a2333d61bd 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6235 c36d0243b287d392c6f2e2a2333d61bd 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6235 c36d0243b287d392c6f2e2a2333d61bd 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6235 c36d0243b287d392c6f2e2a2333d61bd 215 SMART SM00448 2 113 7.0E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6235 c36d0243b287d392c6f2e2a2333d61bd 215 SUPERFAMILY SSF52172 2 132 1.99E-32 T 14-10-2018 IPR011006 CheY-like superfamily Amir_0893 8ee8ebc94479f4dc4cc2ee8c98a3e01f 251 Gene3D G3DSA:3.40.50.1980 13 126 2.3E-19 T 14-10-2018 Amir_0893 8ee8ebc94479f4dc4cc2ee8c98a3e01f 251 Gene3D G3DSA:3.40.50.1980 129 246 7.0E-7 T 14-10-2018 Amir_0893 8ee8ebc94479f4dc4cc2ee8c98a3e01f 251 SUPERFAMILY SSF53807 15 247 9.42E-28 T 14-10-2018 Amir_6749 758defab7ddee88798f135a38730da54 226 SMART SM00448 2 112 1.8E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6749 758defab7ddee88798f135a38730da54 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 224 3.5E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_6749 758defab7ddee88798f135a38730da54 226 SUPERFAMILY SSF46894 127 225 8.79E-32 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_6749 758defab7ddee88798f135a38730da54 226 Gene3D G3DSA:1.10.10.10 121 226 7.2E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6749 758defab7ddee88798f135a38730da54 226 Gene3D G3DSA:3.40.50.2300 1 120 4.4E-36 T 14-10-2018 Amir_6749 758defab7ddee88798f135a38730da54 226 Pfam PF00072 Response regulator receiver domain 4 113 3.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6749 758defab7ddee88798f135a38730da54 226 SMART SM00862 148 224 1.2E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_6749 758defab7ddee88798f135a38730da54 226 SUPERFAMILY SSF52172 3 126 6.26E-41 T 14-10-2018 IPR011006 CheY-like superfamily Amir_6775 63a8c2d1db74fa10e24481aa11d43d91 375 Gene3D G3DSA:3.40.50.150 3 251 1.7E-47 T 14-10-2018 Amir_6775 63a8c2d1db74fa10e24481aa11d43d91 375 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 97 215 2.0E-24 T 14-10-2018 Amir_6775 63a8c2d1db74fa10e24481aa11d43d91 375 SUPERFAMILY SSF53335 8 213 2.91E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_5949 b38d8cced759fa8b63b6d206a7650b72 210 Gene3D G3DSA:1.20.120.450 20 156 6.6E-5 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_5949 b38d8cced759fa8b63b6d206a7650b72 210 SUPERFAMILY SSF109854 24 154 1.98E-12 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_5949 b38d8cced759fa8b63b6d206a7650b72 210 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 26 192 8.0E-14 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type Amir_5949 b38d8cced759fa8b63b6d206a7650b72 210 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 27 149 9.6E-11 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 Amir_5441 0492f89aa388dd9b41bd9b7dc3dc2138 268 PIRSF PIRSF005578 1 264 1.5E-94 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 Amir_5441 0492f89aa388dd9b41bd9b7dc3dc2138 268 SMART SM00363 5 68 3.4E-4 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_5441 0492f89aa388dd9b41bd9b7dc3dc2138 268 SUPERFAMILY SSF55174 5 58 6.39E-11 T 14-10-2018 Amir_5441 0492f89aa388dd9b41bd9b7dc3dc2138 268 Gene3D G3DSA:3.40.50.150 65 266 2.8E-70 T 14-10-2018 Amir_5441 0492f89aa388dd9b41bd9b7dc3dc2138 268 Pfam PF01728 FtsJ-like methyltransferase 63 244 1.9E-17 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Amir_5441 0492f89aa388dd9b41bd9b7dc3dc2138 268 Gene3D G3DSA:3.10.290.10 1 64 4.9E-14 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amir_5441 0492f89aa388dd9b41bd9b7dc3dc2138 268 Pfam PF01479 S4 domain 6 47 1.1E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_5441 0492f89aa388dd9b41bd9b7dc3dc2138 268 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 6 239 4.4E-60 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 Amir_5441 0492f89aa388dd9b41bd9b7dc3dc2138 268 SUPERFAMILY SSF53335 62 246 1.41E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_6664 05b725f1ad49230c3666486f7f107aaa 627 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 30 218 3.7E-26 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Amir_6664 05b725f1ad49230c3666486f7f107aaa 627 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 22 615 1.0E-201 T 14-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 Amir_6664 05b725f1ad49230c3666486f7f107aaa 627 Gene3D G3DSA:3.40.50.970 231 433 1.3E-65 T 14-10-2018 Amir_6664 05b725f1ad49230c3666486f7f107aaa 627 SUPERFAMILY SSF52922 523 622 9.26E-16 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_6664 05b725f1ad49230c3666486f7f107aaa 627 SUPERFAMILY SSF53323 24 232 4.71E-17 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amir_6664 05b725f1ad49230c3666486f7f107aaa 627 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 267 483 7.2E-54 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Amir_6664 05b725f1ad49230c3666486f7f107aaa 627 Gene3D G3DSA:3.40.50.920 520 623 4.2E-20 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_6664 05b725f1ad49230c3666486f7f107aaa 627 Gene3D G3DSA:3.40.920.10 18 224 8.9E-15 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amir_6664 05b725f1ad49230c3666486f7f107aaa 627 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 523 587 8.6E-8 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Amir_6664 05b725f1ad49230c3666486f7f107aaa 627 SUPERFAMILY SSF52518 242 506 1.28E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_3920 5fa1f3f790cbaec1317a1f362a307af9 270 SUPERFAMILY SSF54506 31 269 6.67E-13 T 14-10-2018 Amir_3920 5fa1f3f790cbaec1317a1f362a307af9 270 Gene3D G3DSA:3.10.310.10 8 266 6.8E-6 T 14-10-2018 Amir_3920 5fa1f3f790cbaec1317a1f362a307af9 270 Gene3D G3DSA:3.10.310.10 119 257 6.8E-6 T 14-10-2018 Amir_1304 14f1f5d304de61ef8f55b0d7b57989cf 369 Gene3D G3DSA:3.40.50.720 3 359 5.7E-131 T 14-10-2018 Amir_1304 14f1f5d304de61ef8f55b0d7b57989cf 369 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 8.5E-33 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Amir_1304 14f1f5d304de61ef8f55b0d7b57989cf 369 SUPERFAMILY SSF52283 2 168 3.74E-41 T 14-10-2018 Amir_1304 14f1f5d304de61ef8f55b0d7b57989cf 369 Gene3D G3DSA:3.40.50.720 137 314 5.7E-131 T 14-10-2018 Amir_1304 14f1f5d304de61ef8f55b0d7b57989cf 369 SUPERFAMILY SSF51735 137 312 4.36E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1304 14f1f5d304de61ef8f55b0d7b57989cf 369 SMART SM01003 4 137 1.2E-40 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Amir_1304 14f1f5d304de61ef8f55b0d7b57989cf 369 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 362 3.4E-68 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Amir_1304 14f1f5d304de61ef8f55b0d7b57989cf 369 SMART SM01002 146 307 1.9E-74 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Amir_1304 14f1f5d304de61ef8f55b0d7b57989cf 369 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 Amir_5087 94e801a693a732a2830697ec7cc31f92 265 Gene3D G3DSA:3.30.30.40 118 154 4.9E-58 T 14-10-2018 Amir_5087 94e801a693a732a2830697ec7cc31f92 265 SUPERFAMILY SSF100950 5 261 2.51E-69 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Amir_5087 94e801a693a732a2830697ec7cc31f92 265 Gene3D G3DSA:3.40.1080.10 5 261 4.9E-58 T 14-10-2018 Amir_5087 94e801a693a732a2830697ec7cc31f92 265 Pfam PF01144 Coenzyme A transferase 6 222 2.8E-20 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Amir_5087 94e801a693a732a2830697ec7cc31f92 265 SMART SM00882 4 224 6.1E-37 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 SMART SM00436 133 221 1.2E-43 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 Gene3D G3DSA:3.40.50.140 18 163 5.0E-57 T 14-10-2018 Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 Gene3D G3DSA:2.70.20.10 213 510 1.9E-173 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 Gene3D G3DSA:1.10.290.10 301 429 1.9E-173 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 Hamap MF_00952 DNA topoisomerase 1 [topA]. 19 792 54.667 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 Gene3D G3DSA:1.10.460.10 164 603 1.9E-173 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 Pfam PF13368 Topoisomerase C-terminal repeat 647 699 1.2E-8 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 Pfam PF13368 Topoisomerase C-terminal repeat 837 889 4.5E-19 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 Pfam PF13368 Topoisomerase C-terminal repeat 705 766 6.6E-14 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 Pfam PF13368 Topoisomerase C-terminal repeat 771 824 5.9E-18 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 1.4E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 414 430 1.4E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 1.4E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 335 344 1.4E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 107 120 1.4E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 21 666 5.2E-246 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 SUPERFAMILY SSF56712 19 604 8.76E-175 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 Pfam PF01751 Toprim domain 21 142 2.0E-29 T 14-10-2018 IPR006171 TOPRIM domain Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 Pfam PF01131 DNA topoisomerase 158 600 5.6E-118 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 SMART SM00437 293 563 1.0E-117 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 330 344 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Amir_0291 c5dbd2f2e354966577feb8a8a76ee57e 923 SMART SM00493 19 133 1.0E-40 T 14-10-2018 IPR006171 TOPRIM domain Amir_6871 8aec3475f18d156ad82bc805d2868490 720 SMART SM00267 281 452 3.3E-56 T 14-10-2018 IPR000160 GGDEF domain Amir_6871 8aec3475f18d156ad82bc805d2868490 720 Pfam PF00990 Diguanylate cyclase, GGDEF domain 292 447 8.4E-41 T 14-10-2018 IPR000160 GGDEF domain Amir_6871 8aec3475f18d156ad82bc805d2868490 720 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 162 288 1.2E-28 T 14-10-2018 IPR000014 PAS domain Amir_6871 8aec3475f18d156ad82bc805d2868490 720 SUPERFAMILY SSF141868 471 719 1.44E-81 T 14-10-2018 IPR035919 EAL domain superfamily Amir_6871 8aec3475f18d156ad82bc805d2868490 720 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 289 450 1.3E-34 T 14-10-2018 IPR000160 GGDEF domain Amir_6871 8aec3475f18d156ad82bc805d2868490 720 SMART SM00052 462 713 4.1E-107 T 14-10-2018 IPR001633 EAL domain Amir_6871 8aec3475f18d156ad82bc805d2868490 720 SMART SM00086 239 281 8.3E-8 T 14-10-2018 IPR001610 PAC motif Amir_6871 8aec3475f18d156ad82bc805d2868490 720 Pfam PF00563 EAL domain 471 708 8.8E-70 T 14-10-2018 IPR001633 EAL domain Amir_6871 8aec3475f18d156ad82bc805d2868490 720 Pfam PF13426 PAS domain 178 280 7.4E-15 T 14-10-2018 IPR000014 PAS domain Amir_6871 8aec3475f18d156ad82bc805d2868490 720 Gene3D G3DSA:3.20.20.450 465 720 4.1E-96 T 14-10-2018 IPR035919 EAL domain superfamily Amir_6871 8aec3475f18d156ad82bc805d2868490 720 SMART SM00091 166 232 3.5E-11 T 14-10-2018 IPR000014 PAS domain Amir_6871 8aec3475f18d156ad82bc805d2868490 720 SUPERFAMILY SSF55785 154 279 3.7E-30 T 14-10-2018 IPR035965 PAS domain superfamily Amir_6871 8aec3475f18d156ad82bc805d2868490 720 SUPERFAMILY SSF55073 297 454 1.18E-42 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_6871 8aec3475f18d156ad82bc805d2868490 720 Gene3D G3DSA:3.30.450.20 152 279 1.0E-30 T 14-10-2018 Amir_6871 8aec3475f18d156ad82bc805d2868490 720 Gene3D G3DSA:3.30.70.270 286 464 3.0E-54 T 14-10-2018 Amir_6980 f36e12fa1538b0fcf614c6eb2e272173 299 Pfam PF13411 MerR HTH family regulatory protein 4 72 1.0E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6980 f36e12fa1538b0fcf614c6eb2e272173 299 SMART SM00422 4 73 4.0E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6980 f36e12fa1538b0fcf614c6eb2e272173 299 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 2.3E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6980 f36e12fa1538b0fcf614c6eb2e272173 299 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 2.3E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6980 f36e12fa1538b0fcf614c6eb2e272173 299 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 2.3E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6980 f36e12fa1538b0fcf614c6eb2e272173 299 Gene3D G3DSA:1.10.1660.10 1 127 1.1E-20 T 14-10-2018 Amir_6980 f36e12fa1538b0fcf614c6eb2e272173 299 SUPERFAMILY SSF46955 4 106 1.58E-20 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_5494 f61044499b9fee4dc34d4c746b45a6a3 144 Pfam PF12833 Helix-turn-helix domain 29 108 5.3E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_5494 f61044499b9fee4dc34d4c746b45a6a3 144 SUPERFAMILY SSF46689 8 57 1.7E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5494 f61044499b9fee4dc34d4c746b45a6a3 144 Gene3D G3DSA:1.10.10.60 2 112 6.4E-29 T 14-10-2018 Amir_5494 f61044499b9fee4dc34d4c746b45a6a3 144 SMART SM00342 23 106 9.8E-32 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_5494 f61044499b9fee4dc34d4c746b45a6a3 144 SUPERFAMILY SSF46689 59 110 5.38E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3223 76c3f3cc71397e2ec8c78b962a0c19ea 183 Pfam PF04892 VanZ like family 97 166 2.0E-10 T 14-10-2018 IPR006976 VanZ-like Amir_5460 81ea6bc4dd35309c24af8822f9fae06c 79 SUPERFAMILY SSF47413 7 73 7.88E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_5460 81ea6bc4dd35309c24af8822f9fae06c 79 Pfam PF01381 Helix-turn-helix 17 65 1.7E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_5460 81ea6bc4dd35309c24af8822f9fae06c 79 SMART SM00530 10 66 2.5E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_5460 81ea6bc4dd35309c24af8822f9fae06c 79 Gene3D G3DSA:1.10.260.40 7 71 9.3E-29 T 14-10-2018 Amir_2080 c34f577f7a6a7b9dd95b16497a0e4722 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 5.1E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2080 c34f577f7a6a7b9dd95b16497a0e4722 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 5.1E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2080 c34f577f7a6a7b9dd95b16497a0e4722 233 Pfam PF07729 FCD domain 104 222 6.4E-20 T 14-10-2018 IPR011711 GntR, C-terminal Amir_2080 c34f577f7a6a7b9dd95b16497a0e4722 233 SMART SM00895 102 223 1.6E-17 T 14-10-2018 IPR011711 GntR, C-terminal Amir_2080 c34f577f7a6a7b9dd95b16497a0e4722 233 SUPERFAMILY SSF48008 99 231 1.26E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_2080 c34f577f7a6a7b9dd95b16497a0e4722 233 Gene3D G3DSA:1.20.120.530 98 233 5.3E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_2080 c34f577f7a6a7b9dd95b16497a0e4722 233 SMART SM00345 21 82 5.3E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2080 c34f577f7a6a7b9dd95b16497a0e4722 233 SUPERFAMILY SSF46785 11 84 3.16E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2080 c34f577f7a6a7b9dd95b16497a0e4722 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 76 5.1E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2080 c34f577f7a6a7b9dd95b16497a0e4722 233 Gene3D G3DSA:1.10.10.10 13 84 1.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1983 2b3020634cee54ed3ba95e5b8d509b32 345 Gene3D G3DSA:1.10.260.40 9 69 1.4E-15 T 14-10-2018 Amir_1983 2b3020634cee54ed3ba95e5b8d509b32 345 SUPERFAMILY SSF53822 72 343 5.26E-76 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_1983 2b3020634cee54ed3ba95e5b8d509b32 345 Gene3D G3DSA:3.40.50.2300 171 300 7.0E-69 T 14-10-2018 Amir_1983 2b3020634cee54ed3ba95e5b8d509b32 345 SMART SM00354 14 81 1.1E-9 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1983 2b3020634cee54ed3ba95e5b8d509b32 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 17 59 8.1E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1983 2b3020634cee54ed3ba95e5b8d509b32 345 Gene3D G3DSA:3.40.50.2300 81 332 7.0E-69 T 14-10-2018 Amir_1983 2b3020634cee54ed3ba95e5b8d509b32 345 Pfam PF13377 Periplasmic binding protein-like domain 179 340 4.0E-37 T 14-10-2018 Amir_1983 2b3020634cee54ed3ba95e5b8d509b32 345 SUPERFAMILY SSF47413 15 63 2.88E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3667 01c468003471d748283a1781c2b9df7a 617 SUPERFAMILY SSF52540 351 587 2.56E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3667 01c468003471d748283a1781c2b9df7a 617 SUPERFAMILY SSF90123 28 339 5.49E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_3667 01c468003471d748283a1781c2b9df7a 617 SMART SM00382 379 579 5.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3667 01c468003471d748283a1781c2b9df7a 617 Gene3D G3DSA:3.40.50.300 350 595 1.1E-68 T 14-10-2018 Amir_3667 01c468003471d748283a1781c2b9df7a 617 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3667 01c468003471d748283a1781c2b9df7a 617 Gene3D G3DSA:1.20.1560.10 3 337 2.5E-50 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_3667 01c468003471d748283a1781c2b9df7a 617 Pfam PF00664 ABC transporter transmembrane region 43 304 4.5E-33 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_3667 01c468003471d748283a1781c2b9df7a 617 Pfam PF00005 ABC transporter 371 519 2.0E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0027 db716f560558e489fedbdaa3d0cee75e 420 SUPERFAMILY SSF49879 324 417 2.87E-29 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Amir_0027 db716f560558e489fedbdaa3d0cee75e 420 Pfam PF00498 FHA domain 348 410 9.2E-17 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Amir_0027 db716f560558e489fedbdaa3d0cee75e 420 Pfam PF12401 Protein of unknown function (DUF2662) 4 121 7.5E-39 T 14-10-2018 IPR022128 Domain of unknown function DUF3662 Amir_0027 db716f560558e489fedbdaa3d0cee75e 420 SMART SM00240 346 396 1.2E-12 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Amir_0027 db716f560558e489fedbdaa3d0cee75e 420 Gene3D G3DSA:2.60.200.20 315 419 2.0E-28 T 14-10-2018 Amir_0027 db716f560558e489fedbdaa3d0cee75e 420 Gene3D G3DSA:3.30.2320.60 1 131 1.2E-47 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.559.30 3512 3760 4.3E-156 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.300.30 2079 2180 1.5E-38 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.300.30 7732 7834 4.5E-32 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.300.30 6686 6797 2.5E-12 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.300.30 4179 4284 4.0E-36 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.559.10 5430 5799 5.8E-156 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF13193 AMP-binding enzyme C-terminal domain 5238 5307 8.6E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF13193 AMP-binding enzyme C-terminal domain 7745 7820 7.8E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF13193 AMP-binding enzyme C-terminal domain 6260 6301 3.2E-5 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF13193 AMP-binding enzyme C-terminal domain 3148 3223 1.2E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF13193 AMP-binding enzyme C-terminal domain 2092 2167 3.1E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF13193 AMP-binding enzyme C-terminal domain 4193 4268 2.4E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.40.50.1820 7835 8177 3.2E-111 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF53474 7911 8175 2.48E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF52777 5612 5862 5.34E-55 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF53335 6332 6484 2.17E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF52777 2277 2448 4.34E-47 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF47336 2185 2256 3.66E-19 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF47336 5323 5396 4.32E-20 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF52777 2460 2712 6.23E-59 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:1.10.1200.10 2181 2260 6.7E-27 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:1.10.1200.10 5321 5399 8.8E-30 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:1.10.1200.10 6798 6879 8.1E-30 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4990 5001 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF56801 4803 5343 1.44E-141 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF52777 191 410 5.34E-31 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:1.10.1200.10 4285 4360 7.4E-26 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.40.50.12780 638 972 5.7E-80 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 ProSitePatterns PS00012 Phosphopantetheine attachment site. 6832 6847 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.559.30 1406 1658 3.9E-153 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.559.10 2276 2647 2.8E-153 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF56801 3754 4306 4.58E-155 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.559.10 4377 4747 3.1E-155 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00501 AMP-binding enzyme 485 978 3.2E-82 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00501 AMP-binding enzyme 2742 3140 1.4E-96 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00501 AMP-binding enzyme 1687 2084 1.6E-99 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00501 AMP-binding enzyme 3794 4185 1.6E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00501 AMP-binding enzyme 4842 5230 7.3E-95 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00501 AMP-binding enzyme 7354 7737 9.5E-95 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00501 AMP-binding enzyme 5893 6252 7.6E-80 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF47336 1134 1203 2.88E-17 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF52777 1219 1422 2.78E-50 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1165 1180 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.559.10 11 208 4.0E-48 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2878 2889 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF56801 7315 7857 5.23E-151 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF52777 3516 3779 8.67E-59 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.559.10 3333 3702 4.3E-156 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.559.30 4557 4808 3.1E-155 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.40.50.12780 3780 4178 9.2E-133 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.40.50.12780 7345 7731 7.0E-139 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.40.50.12780 4828 5224 1.4E-130 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.40.50.12780 2730 3134 3.7E-141 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.40.50.12780 5881 6246 2.1E-121 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.40.50.12780 1675 2078 1.5E-147 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.559.10 1226 1596 3.9E-153 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF52777 1409 1656 4.78E-56 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.300.30 3135 3234 1.2E-37 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.300.30 5225 5320 4.2E-27 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF47336 4287 4358 1.1E-17 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.559.30 211 425 3.7E-45 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3924 3935 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 ProSitePatterns PS00012 Phosphopantetheine attachment site. 5354 5369 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SMART SM00824 Thioesterase 7935 8179 5.6E-6 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2215 2230 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF47336 7839 7910 2.22E-18 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF56801 1673 2204 6.8E-162 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF52777 5431 5600 1.45E-50 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF13489 Methyltransferase domain 6349 6496 8.8E-9 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 ProSitePatterns PS00012 Phosphopantetheine attachment site. 7869 7884 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.559.30 2457 2709 2.8E-153 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4863 5253 7.7E-127 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3815 4209 2.7E-125 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1708 2108 4.7E-137 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2767 3164 3.9E-137 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 5914 6276 5.7E-114 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 7375 7761 2.6E-124 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF52777 7071 7323 2.78E-59 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.559.30 7069 7320 6.6E-158 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF52777 4372 4573 7.45E-49 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1821 1832 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.559.30 5609 5860 5.8E-156 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SMART SM00823 Phosphopantetheine attachment site 5330 5399 1.4E-7 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SMART SM00823 Phosphopantetheine attachment site 6808 6877 1.6E-7 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SMART SM00823 Phosphopantetheine attachment site 3248 3317 5.3E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SMART SM00823 Phosphopantetheine attachment site 1141 1210 4.9E-6 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SMART SM00823 Phosphopantetheine attachment site 2191 2260 1.5E-7 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SMART SM00823 Phosphopantetheine attachment site 4293 4362 4.6E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SMART SM00823 Phosphopantetheine attachment site 7845 7914 1.0E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 ProSitePatterns PS00455 Putative AMP-binding domain signature. 7483 7494 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF56801 5859 6821 7.98E-141 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.40.50.12780 475 627 9.2E-36 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3272 3287 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00668 Condensation domain 3331 3775 3.7E-89 T 14-10-2018 IPR001242 Condensation domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00668 Condensation domain 4376 4823 2.3E-87 T 14-10-2018 IPR001242 Condensation domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00668 Condensation domain 8 342 2.6E-46 T 14-10-2018 IPR001242 Condensation domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00668 Condensation domain 6891 7336 1.2E-89 T 14-10-2018 IPR001242 Condensation domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00668 Condensation domain 2274 2722 5.4E-85 T 14-10-2018 IPR001242 Condensation domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00668 Condensation domain 5429 5876 2.0E-87 T 14-10-2018 IPR001242 Condensation domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00668 Condensation domain 1224 1669 9.8E-81 T 14-10-2018 IPR001242 Condensation domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF52777 3334 3503 3.0E-47 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4317 4332 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.300.30 6247 6314 3.3E-16 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.40.50.150 6344 6516 3.2E-30 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF56801 468 1154 1.01E-132 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF56801 2727 3261 1.44E-160 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:3.30.559.10 6893 7259 6.6E-158 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF52777 4559 4807 2.78E-59 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF47336 6802 6873 5.37E-20 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF52777 11 185 5.0E-31 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF52777 6894 7060 2.56E-50 T 14-10-2018 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00975 Thioesterase domain 7933 8159 2.6E-29 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 ProSitePatterns PS00455 Putative AMP-binding domain signature. 6015 6026 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00550 Phosphopantetheine attachment site 6810 6873 1.4E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00550 Phosphopantetheine attachment site 5332 5395 4.8E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00550 Phosphopantetheine attachment site 3250 3312 4.0E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00550 Phosphopantetheine attachment site 7847 7910 2.9E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00550 Phosphopantetheine attachment site 1143 1203 2.4E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00550 Phosphopantetheine attachment site 4296 4357 1.2E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Pfam PF00550 Phosphopantetheine attachment site 2193 2255 1.6E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:1.10.1200.10 3235 3322 2.6E-28 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 Gene3D G3DSA:1.10.1200.10 1128 1213 4.3E-26 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3602 3560576104a2ffdec52fd3b919de15e5 8211 SUPERFAMILY SSF47336 3242 3314 3.66E-19 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2456 8bc3db3485d404d96edab00475302c9e 566 SUPERFAMILY SSF52540 5 254 1.33E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2456 8bc3db3485d404d96edab00475302c9e 566 SUPERFAMILY SSF52540 298 540 2.07E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2456 8bc3db3485d404d96edab00475302c9e 566 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 262 0.016 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_2456 8bc3db3485d404d96edab00475302c9e 566 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 521 553 2.2E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_2456 8bc3db3485d404d96edab00475302c9e 566 Gene3D G3DSA:3.40.50.300 3 286 7.6E-83 T 14-10-2018 Amir_2456 8bc3db3485d404d96edab00475302c9e 566 Gene3D G3DSA:3.40.50.300 295 564 4.2E-81 T 14-10-2018 Amir_2456 8bc3db3485d404d96edab00475302c9e 566 Pfam PF00005 ABC transporter 26 182 1.4E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2456 8bc3db3485d404d96edab00475302c9e 566 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_2456 8bc3db3485d404d96edab00475302c9e 566 SMART SM00382 34 232 3.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2456 8bc3db3485d404d96edab00475302c9e 566 SMART SM00382 327 527 9.5E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2456 8bc3db3485d404d96edab00475302c9e 566 Pfam PF00005 ABC transporter 319 470 6.4E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2456 8bc3db3485d404d96edab00475302c9e 566 ProSitePatterns PS00211 ABC transporters family signature. 442 456 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_4901 ea01b95d1c4c116b17a22f57c73622e2 161 Pfam PF00196 Bacterial regulatory proteins, luxR family 100 149 2.6E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4901 ea01b95d1c4c116b17a22f57c73622e2 161 SUPERFAMILY SSF46894 95 149 4.42E-12 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4901 ea01b95d1c4c116b17a22f57c73622e2 161 SMART SM00421 98 155 5.5E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4901 ea01b95d1c4c116b17a22f57c73622e2 161 Gene3D G3DSA:1.10.10.10 38 158 6.6E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3875 0a240da90fdf2e13d3b57e6e396cbb4d 495 Gene3D G3DSA:1.25.10.10 288 447 2.4E-6 T 14-10-2018 IPR011989 Armadillo-like helical Amir_3875 0a240da90fdf2e13d3b57e6e396cbb4d 495 SUPERFAMILY SSF48371 111 388 2.27E-10 T 14-10-2018 IPR016024 Armadillo-type fold Amir_6247 69a6f7c6c2ae0900c622e5244e87711c 127 Gene3D G3DSA:2.40.50.100 2 126 1.7E-45 T 14-10-2018 Amir_6247 69a6f7c6c2ae0900c622e5244e87711c 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 51 80 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Amir_6247 69a6f7c6c2ae0900c622e5244e87711c 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 35.173 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Amir_6247 69a6f7c6c2ae0900c622e5244e87711c 127 Pfam PF01597 Glycine cleavage H-protein 8 124 2.8E-37 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Amir_6247 69a6f7c6c2ae0900c622e5244e87711c 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 125 2.5E-41 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Amir_6247 69a6f7c6c2ae0900c622e5244e87711c 127 SUPERFAMILY SSF51230 4 125 5.5E-38 T 14-10-2018 IPR011053 Single hybrid motif Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 SUPERFAMILY SSF51735 1749 2021 3.74E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 SUPERFAMILY SSF47336 1634 1718 3.14E-18 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Pfam PF00698 Acyl transferase domain 577 891 5.5E-59 T 14-10-2018 IPR014043 Acyl transferase Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Gene3D G3DSA:3.40.366.10 576 876 7.3E-154 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 SUPERFAMILY SSF53901 34 406 6.41E-102 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Gene3D G3DSA:3.40.50.720 1181 1618 3.3E-105 T 14-10-2018 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1368 1540 1.4E-45 T 14-10-2018 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1666 1681 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 SUPERFAMILY SSF51735 1179 1353 4.86E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Pfam PF00550 Phosphopantetheine attachment site 1646 1707 6.7E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 197 213 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Pfam PF08990 Erythronolide synthase docking 5 29 5.7E-10 T 14-10-2018 IPR015083 Polyketide synthase, docking domain GO:0016740|GO:0048037 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 410 527 7.7E-15 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 578 873 1.9E-109 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 SUPERFAMILY SSF52151 574 864 2.62E-71 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 SUPERFAMILY SSF51735 1366 1615 5.0E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Pfam PF14765 Polyketide synthase dehydratase 939 1067 7.0E-13 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 292 407 2.7E-43 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Gene3D G3DSA:3.10.129.110 928 1081 1.6E-34 T 14-10-2018 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Gene3D G3DSA:3.10.129.110 1082 1179 8.5E-16 T 14-10-2018 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 1749 2102 1.9E-96 T 14-10-2018 IPR010080 Thioester reductase-like domain Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Gene3D G3DSA:3.40.47.10 28 476 1.6E-185 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 SMART SM00826 939 1104 4.0E-27 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Pfam PF08659 KR domain 1368 1539 1.3E-49 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 SMART SM01294 1646 1707 0.0015 T 14-10-2018 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Gene3D G3DSA:3.40.50.720 1719 2107 3.9E-105 T 14-10-2018 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 SMART SM00823 Phosphopantetheine attachment site 1641 1711 8.8E-27 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 36 284 1.9E-89 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Gene3D G3DSA:3.30.70.3290 478 920 7.3E-154 T 14-10-2018 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 SMART SM00825 Beta-ketoacyl synthase 38 460 3.8E-209 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 SUPERFAMILY SSF55048 701 765 6.41E-13 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Pfam PF07993 Male sterility protein 1751 1988 1.6E-60 T 14-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 Amir_4698 bebbad67c51a2267451c5d62d77e6e56 2113 Gene3D G3DSA:1.10.1200.10 1622 1711 1.2E-27 T 14-10-2018 IPR036736 ACP-like superfamily Amir_1503 e0853ee28be831dfeba99875b05dfa12 378 Gene3D G3DSA:3.40.50.2300 150 357 8.8E-92 T 14-10-2018 Amir_1503 e0853ee28be831dfeba99875b05dfa12 378 Pfam PF13407 Periplasmic binding protein domain 50 313 1.5E-53 T 14-10-2018 IPR025997 Periplasmic binding protein Amir_1503 e0853ee28be831dfeba99875b05dfa12 378 SUPERFAMILY SSF53822 46 351 1.21E-57 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_1503 e0853ee28be831dfeba99875b05dfa12 378 Gene3D G3DSA:3.40.50.2300 47 339 8.8E-92 T 14-10-2018 Amir_4454 49cd561ed1633d74ab88a41b4959e26d 281 Pfam PF13460 NAD(P)H-binding 10 176 2.0E-15 T 14-10-2018 IPR016040 NAD(P)-binding domain Amir_4454 49cd561ed1633d74ab88a41b4959e26d 281 SUPERFAMILY SSF51735 5 266 4.29E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4454 49cd561ed1633d74ab88a41b4959e26d 281 Gene3D G3DSA:3.40.50.720 7 259 2.6E-61 T 14-10-2018 Amir_4454 49cd561ed1633d74ab88a41b4959e26d 281 Gene3D G3DSA:3.90.25.10 128 261 2.6E-61 T 14-10-2018 Amir_0613 4a60fa15fe7507a9c16466468c39c179 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 4.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_0613 4a60fa15fe7507a9c16466468c39c179 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 459 4.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_0613 4a60fa15fe7507a9c16466468c39c179 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 4.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_0613 4a60fa15fe7507a9c16466468c39c179 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 4.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_0613 4a60fa15fe7507a9c16466468c39c179 476 SUPERFAMILY SSF47384 218 308 1.26E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_0613 4a60fa15fe7507a9c16466468c39c179 476 Gene3D G3DSA:3.30.565.10 309 463 5.4E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0613 4a60fa15fe7507a9c16466468c39c179 476 SUPERFAMILY SSF158472 185 231 2.22E-5 T 14-10-2018 Amir_0613 4a60fa15fe7507a9c16466468c39c179 476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 459 1.0E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0613 4a60fa15fe7507a9c16466468c39c179 476 SMART SM00387 348 462 3.9E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0613 4a60fa15fe7507a9c16466468c39c179 476 SMART SM00388 235 307 2.8E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_0613 4a60fa15fe7507a9c16466468c39c179 476 Pfam PF00672 HAMP domain 182 230 5.2E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_0613 4a60fa15fe7507a9c16466468c39c179 476 SUPERFAMILY SSF55874 309 461 6.94E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0613 4a60fa15fe7507a9c16466468c39c179 476 SMART SM00304 182 234 3.2E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_0613 4a60fa15fe7507a9c16466468c39c179 476 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 306 2.5E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_0613 4a60fa15fe7507a9c16466468c39c179 476 Gene3D G3DSA:1.10.287.130 186 307 3.5E-26 T 14-10-2018 Amir_1520 0454e934fb4c031997864d9e5c2b1dad 218 Pfam PF02080 TrkA-C domain 149 214 4.4E-13 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Amir_1520 0454e934fb4c031997864d9e5c2b1dad 218 Gene3D G3DSA:3.40.50.720 2 133 1.9E-30 T 14-10-2018 Amir_1520 0454e934fb4c031997864d9e5c2b1dad 218 PRINTS PR00335 TrkA potassium uptake protein signature 59 69 9.7E-9 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Amir_1520 0454e934fb4c031997864d9e5c2b1dad 218 PRINTS PR00335 TrkA potassium uptake protein signature 72 86 9.7E-9 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Amir_1520 0454e934fb4c031997864d9e5c2b1dad 218 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 9.7E-9 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Amir_1520 0454e934fb4c031997864d9e5c2b1dad 218 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 9.7E-9 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Amir_1520 0454e934fb4c031997864d9e5c2b1dad 218 SUPERFAMILY SSF51735 1 145 9.77E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1520 0454e934fb4c031997864d9e5c2b1dad 218 SUPERFAMILY SSF116726 132 216 8.37E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amir_1520 0454e934fb4c031997864d9e5c2b1dad 218 Gene3D G3DSA:3.30.70.1450 136 217 1.0E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amir_1520 0454e934fb4c031997864d9e5c2b1dad 218 Pfam PF02254 TrkA-N domain 3 118 1.4E-26 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 298 412 1.2E-31 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 SUPERFAMILY SSF51735 1193 1435 2.43E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 Gene3D G3DSA:3.40.366.20 483 884 3.3E-92 T 14-10-2018 Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 SMART SM00826 1442 1616 9.6E-4 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 SUPERFAMILY SSF53901 2 411 5.6E-61 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 Gene3D G3DSA:3.40.50.720 1031 1426 2.3E-66 T 14-10-2018 Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 SMART SM00825 Beta-ketoacyl synthase 6 464 6.0E-65 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 SUPERFAMILY SSF52151 580 853 4.19E-44 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 421 535 2.6E-7 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 Pfam PF14765 Polyketide synthase dehydratase 1450 1735 7.5E-43 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 Gene3D G3DSA:1.10.1200.10 920 1017 2.6E-12 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 Pfam PF08659 KR domain 1197 1376 2.9E-28 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 583 878 4.4E-33 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 Gene3D G3DSA:3.40.47.10 1 471 1.7E-126 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 SUPERFAMILY SSF54637 1444 1536 3.46E-6 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 SUPERFAMILY SSF55048 689 752 2.62E-12 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 290 4.0E-53 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1195 1378 1.0E-10 T 14-10-2018 Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 Pfam PF00698 Acyl transferase domain 616 836 7.8E-28 T 14-10-2018 IPR014043 Acyl transferase Amir_4083 ef6eeea8336d6caa94f75342de3745e0 1934 Gene3D G3DSA:3.10.129.110 1462 1735 1.1E-30 T 14-10-2018 Amir_4056 665b299efbc02051ab2ba5702220e90d 209 SUPERFAMILY SSF48498 67 203 9.53E-21 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4056 665b299efbc02051ab2ba5702220e90d 209 Gene3D G3DSA:1.10.357.10 56 200 3.9E-23 T 14-10-2018 Amir_4056 665b299efbc02051ab2ba5702220e90d 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 48 9.3E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4056 665b299efbc02051ab2ba5702220e90d 209 Gene3D G3DSA:1.10.10.60 1 55 6.5E-20 T 14-10-2018 Amir_4056 665b299efbc02051ab2ba5702220e90d 209 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 67 194 3.1E-9 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 Amir_4056 665b299efbc02051ab2ba5702220e90d 209 SUPERFAMILY SSF46689 2 55 3.09E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0493 7463ffe1f908c4367667de68188268d0 537 SUPERFAMILY SSF52540 354 525 1.81E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0493 7463ffe1f908c4367667de68188268d0 537 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0493 7463ffe1f908c4367667de68188268d0 537 Gene3D G3DSA:3.40.50.300 312 534 1.5E-37 T 14-10-2018 Amir_0493 7463ffe1f908c4367667de68188268d0 537 Gene3D G3DSA:3.40.50.300 5 284 8.5E-50 T 14-10-2018 Amir_0493 7463ffe1f908c4367667de68188268d0 537 Pfam PF00005 ABC transporter 19 185 3.5E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0493 7463ffe1f908c4367667de68188268d0 537 Pfam PF00005 ABC transporter 364 490 5.7E-14 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0493 7463ffe1f908c4367667de68188268d0 537 SMART SM00382 28 230 2.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0493 7463ffe1f908c4367667de68188268d0 537 SMART SM00382 371 536 5.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0493 7463ffe1f908c4367667de68188268d0 537 SUPERFAMILY SSF52540 4 228 7.53E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6535 384e56aa2248e02c2682fc327ed955fd 503 SMART SM01240 17 489 0.0 T 14-10-2018 Amir_6535 384e56aa2248e02c2682fc327ed955fd 503 SUPERFAMILY SSF54631 73 212 7.42E-30 T 14-10-2018 Amir_6535 384e56aa2248e02c2682fc327ed955fd 503 Pfam PF00571 CBS domain 103 152 2.5E-10 T 14-10-2018 IPR000644 CBS domain Amir_6535 384e56aa2248e02c2682fc327ed955fd 503 Pfam PF00571 CBS domain 159 212 1.1E-7 T 14-10-2018 IPR000644 CBS domain Amir_6535 384e56aa2248e02c2682fc327ed955fd 503 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 18 471 4.8E-185 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Amir_6535 384e56aa2248e02c2682fc327ed955fd 503 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 18 489 5.0E-154 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Amir_6535 384e56aa2248e02c2682fc327ed955fd 503 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 18 502 83.058 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Amir_6535 384e56aa2248e02c2682fc327ed955fd 503 Gene3D G3DSA:3.20.20.70 10 502 3.1E-207 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_6535 384e56aa2248e02c2682fc327ed955fd 503 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 305 317 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Amir_6535 384e56aa2248e02c2682fc327ed955fd 503 PIRSF PIRSF000130 9 503 8.0E-199 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Amir_6535 384e56aa2248e02c2682fc327ed955fd 503 SMART SM00116 106 154 6.1E-9 T 14-10-2018 IPR000644 CBS domain Amir_6535 384e56aa2248e02c2682fc327ed955fd 503 SMART SM00116 167 215 2.0E-7 T 14-10-2018 IPR000644 CBS domain Amir_6535 384e56aa2248e02c2682fc327ed955fd 503 SUPERFAMILY SSF51412 13 493 1.13E-114 T 14-10-2018 Amir_5080 297c4b8811ad37e82e4609643025ff50 249 Pfam PF09339 IclR helix-turn-helix domain 7 58 1.5E-15 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_5080 297c4b8811ad37e82e4609643025ff50 249 Gene3D G3DSA:1.10.10.10 1 73 4.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5080 297c4b8811ad37e82e4609643025ff50 249 Pfam PF01614 Bacterial transcriptional regulator 120 244 2.2E-35 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Amir_5080 297c4b8811ad37e82e4609643025ff50 249 Gene3D G3DSA:3.30.450.40 74 249 4.5E-61 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_5080 297c4b8811ad37e82e4609643025ff50 249 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 2 247 3.1E-99 T 14-10-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 Amir_5080 297c4b8811ad37e82e4609643025ff50 249 SUPERFAMILY SSF46785 5 77 3.52E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5080 297c4b8811ad37e82e4609643025ff50 249 SMART SM00346 5 93 2.1E-30 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_5080 297c4b8811ad37e82e4609643025ff50 249 SUPERFAMILY SSF55781 69 247 9.16E-49 T 14-10-2018 Amir_6899 c89ba29ed48ed42645f0470503caa806 258 Pfam PF14011 EspG family 11 252 4.6E-67 T 14-10-2018 IPR025734 EspG family Amir_6208 a70f64df861a253ba91cc7e0bc10c6e2 226 Pfam PF00072 Response regulator receiver domain 5 113 1.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6208 a70f64df861a253ba91cc7e0bc10c6e2 226 Gene3D G3DSA:3.40.50.2300 1 131 6.8E-36 T 14-10-2018 Amir_6208 a70f64df861a253ba91cc7e0bc10c6e2 226 Gene3D G3DSA:1.10.10.10 132 226 7.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6208 a70f64df861a253ba91cc7e0bc10c6e2 226 SUPERFAMILY SSF52172 2 126 7.54E-41 T 14-10-2018 IPR011006 CheY-like superfamily Amir_6208 a70f64df861a253ba91cc7e0bc10c6e2 226 SMART SM00862 151 222 1.2E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_6208 a70f64df861a253ba91cc7e0bc10c6e2 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 222 1.7E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_6208 a70f64df861a253ba91cc7e0bc10c6e2 226 SUPERFAMILY SSF46894 125 224 3.64E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_6208 a70f64df861a253ba91cc7e0bc10c6e2 226 SMART SM00448 3 113 3.0E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3888 95ed8164ad178d67dc4de2e3cdaa5f10 187 SUPERFAMILY SSF48498 75 179 6.0E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3888 95ed8164ad178d67dc4de2e3cdaa5f10 187 Gene3D G3DSA:1.10.357.10 7 185 9.4E-46 T 14-10-2018 Amir_3888 95ed8164ad178d67dc4de2e3cdaa5f10 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3888 95ed8164ad178d67dc4de2e3cdaa5f10 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3888 95ed8164ad178d67dc4de2e3cdaa5f10 187 SUPERFAMILY SSF46689 3 77 5.99E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3888 95ed8164ad178d67dc4de2e3cdaa5f10 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 1.7E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5738 226b586c024ecc0da77c15afbea94316 347 Hamap MF_01694 Biotin synthase [bioB]. 32 341 36.575 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Amir_5738 226b586c024ecc0da77c15afbea94316 347 Pfam PF04055 Radical SAM superfamily 79 231 5.5E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_5738 226b586c024ecc0da77c15afbea94316 347 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 248 336 8.2E-10 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Amir_5738 226b586c024ecc0da77c15afbea94316 347 Gene3D G3DSA:3.20.20.70 35 342 9.8E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5738 226b586c024ecc0da77c15afbea94316 347 TIGRFAM TIGR00433 bioB: biotin synthase 44 338 3.0E-100 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Amir_5738 226b586c024ecc0da77c15afbea94316 347 SMART SM00876 248 340 1.1E-24 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Amir_5738 226b586c024ecc0da77c15afbea94316 347 SMART SM00729 72 277 5.9E-32 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amir_5738 226b586c024ecc0da77c15afbea94316 347 SUPERFAMILY SSF102114 32 329 1.2E-60 T 14-10-2018 Amir_5738 226b586c024ecc0da77c15afbea94316 347 PIRSF PIRSF001619 16 346 3.0E-99 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Amir_5217 2d4e65494aee5c976ee70938feb4192f 160 Gene3D G3DSA:3.40.50.960 1 157 4.4E-52 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amir_5217 2d4e65494aee5c976ee70938feb4192f 160 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 12 155 25.963 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amir_5217 2d4e65494aee5c976ee70938feb4192f 160 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 17 151 1.6E-46 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amir_5217 2d4e65494aee5c976ee70938feb4192f 160 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 19 150 6.0E-41 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amir_5217 2d4e65494aee5c976ee70938feb4192f 160 SUPERFAMILY SSF52121 11 155 7.06E-48 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amir_3714 2b477538cf9a680d3576fd8062b0591c 178 SUPERFAMILY SSF46689 3 65 4.69E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3714 2b477538cf9a680d3576fd8062b0591c 178 SUPERFAMILY SSF48498 73 175 3.42E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3714 2b477538cf9a680d3576fd8062b0591c 178 Pfam PF16859 Bacterial transcriptional repressor C-terminal 70 166 7.9E-21 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Amir_3714 2b477538cf9a680d3576fd8062b0591c 178 Gene3D G3DSA:1.10.10.60 1 51 2.3E-18 T 14-10-2018 Amir_3714 2b477538cf9a680d3576fd8062b0591c 178 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3714 2b477538cf9a680d3576fd8062b0591c 178 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3714 2b477538cf9a680d3576fd8062b0591c 178 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 1.8E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3714 2b477538cf9a680d3576fd8062b0591c 178 Gene3D G3DSA:1.10.357.10 52 178 1.2E-25 T 14-10-2018 Amir_4282 0e61e41ff6e506f3facb8e46e6792cdd 254 Gene3D G3DSA:1.10.10.10 8 79 1.6E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SUPERFAMILY SSF47336 1433 1543 9.42E-25 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SUPERFAMILY SSF47336 2943 3028 2.49E-19 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1465 1480 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1155 1333 5.8E-45 T 14-10-2018 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2668 2842 3.7E-44 T 14-10-2018 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SUPERFAMILY SSF52151 2053 2330 3.92E-73 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SUPERFAMILY SSF101173 4 34 5.49E-5 T 14-10-2018 IPR036299 Polyketide synthase, docking domain superfmaily Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SMART SM00825 Beta-ketoacyl synthase 1531 1955 3.3E-220 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SMART SM00825 Beta-ketoacyl synthase 36 447 4.5E-209 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SUPERFAMILY SSF53901 31 391 5.91E-103 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Pfam PF08990 Erythronolide synthase docking 2 27 8.5E-11 T 14-10-2018 IPR015083 Polyketide synthase, docking domain GO:0016740|GO:0048037 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SUPERFAMILY SSF55048 673 731 3.01E-11 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SMART SM00823 Phosphopantetheine attachment site 1438 1510 2.3E-33 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SMART SM00823 Phosphopantetheine attachment site 2949 3021 2.7E-28 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1692 1708 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Pfam PF00698 Acyl transferase domain 549 858 8.7E-57 T 14-10-2018 IPR014043 Acyl transferase Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Pfam PF00698 Acyl transferase domain 2055 2326 3.7E-49 T 14-10-2018 IPR014043 Acyl transferase Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Gene3D G3DSA:1.10.1200.10 1418 1511 1.2E-36 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Gene3D G3DSA:3.40.50.720 899 1406 4.4E-154 T 14-10-2018 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Gene3D G3DSA:3.40.50.720 2404 2915 1.3E-148 T 14-10-2018 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SUPERFAMILY SSF55048 2179 2237 1.09E-8 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SUPERFAMILY SSF51735 2450 2656 6.3E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SUPERFAMILY SSF51735 1154 1394 6.4E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Pfam PF08659 KR domain 1156 1331 5.3E-51 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Pfam PF08659 KR domain 2668 2840 1.8E-49 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Gene3D G3DSA:3.30.70.3290 1973 2390 2.1E-150 T 14-10-2018 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 550 840 5.3E-129 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 2056 2342 3.5E-110 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Gene3D G3DSA:3.30.70.3290 465 886 4.7E-162 T 14-10-2018 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1905 1995 1.9E-12 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 399 514 8.4E-12 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1529 1779 3.8E-89 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 34 270 2.8E-82 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SUPERFAMILY SSF53901 1527 1901 3.49E-103 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 183 199 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Gene3D G3DSA:3.40.366.10 2054 2345 2.1E-150 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Gene3D G3DSA:3.40.366.10 548 843 4.7E-162 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Gene3D G3DSA:3.40.47.10 1524 1972 2.4E-191 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Gene3D G3DSA:3.40.47.10 25 462 6.7E-180 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SUPERFAMILY SSF51735 2664 2904 1.01E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SUPERFAMILY SSF52151 547 842 8.11E-79 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SMART SM01294 2950 3017 1.4E-4 T 14-10-2018 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SMART SM01294 1439 1506 1.4E-6 T 14-10-2018 Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2976 2991 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Gene3D G3DSA:1.10.1200.10 2932 3024 5.0E-31 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Pfam PF00550 Phosphopantetheine attachment site 2951 3016 1.5E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Pfam PF00550 Phosphopantetheine attachment site 1440 1506 2.3E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 SUPERFAMILY SSF51735 943 1143 5.51E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1787 1902 5.5E-43 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_2682 bb97a5ae69c531b4b79b071aa994dd4f 3092 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 278 393 3.3E-42 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_5770 caf6f6bd8ea4f9cd0fb66d5f6cf0e963 490 SUPERFAMILY SSF53623 127 337 2.62E-52 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amir_5770 caf6f6bd8ea4f9cd0fb66d5f6cf0e963 490 SUPERFAMILY SSF53244 341 484 4.4E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amir_5770 caf6f6bd8ea4f9cd0fb66d5f6cf0e963 490 Gene3D G3DSA:3.40.1190.10 106 336 2.6E-67 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amir_5770 caf6f6bd8ea4f9cd0fb66d5f6cf0e963 490 Pfam PF08245 Mur ligase middle domain 132 319 1.1E-40 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Amir_5770 caf6f6bd8ea4f9cd0fb66d5f6cf0e963 490 Pfam PF01225 Mur ligase family, catalytic domain 29 82 1.3E-8 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Amir_5770 caf6f6bd8ea4f9cd0fb66d5f6cf0e963 490 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 485 31.398 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_5770 caf6f6bd8ea4f9cd0fb66d5f6cf0e963 490 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 484 3.5E-123 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_5770 caf6f6bd8ea4f9cd0fb66d5f6cf0e963 490 SUPERFAMILY SSF63418 2 77 5.89E-18 T 14-10-2018 IPR035911 MurE/MurF, N-terminal Amir_5770 caf6f6bd8ea4f9cd0fb66d5f6cf0e963 490 Pfam PF02875 Mur ligase family, glutamate ligase domain 341 433 1.6E-23 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Amir_5770 caf6f6bd8ea4f9cd0fb66d5f6cf0e963 490 Gene3D G3DSA:3.40.1390.10 1 81 3.4E-23 T 14-10-2018 Amir_5770 caf6f6bd8ea4f9cd0fb66d5f6cf0e963 490 Gene3D G3DSA:3.90.190.20 339 490 1.1E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amir_1149 b8efe284d766e567b8524def2f1521e5 400 Hamap MF_01812 N-acetyltransferase Eis [eis]. 2 400 32.044 T 14-10-2018 IPR022902 N-acetyltransferase Eis Amir_1149 b8efe284d766e567b8524def2f1521e5 400 Pfam PF13530 Sterol carrier protein domain 177 396 9.2E-47 T 14-10-2018 IPR025559 Enhanced intracellular survival protein domain Amir_1149 b8efe284d766e567b8524def2f1521e5 400 Gene3D G3DSA:3.40.630.30 137 286 1.3E-34 T 14-10-2018 Amir_1149 b8efe284d766e567b8524def2f1521e5 400 Gene3D G3DSA:3.30.1050.10 293 389 3.3E-25 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Amir_1149 b8efe284d766e567b8524def2f1521e5 400 SUPERFAMILY SSF55718 295 400 6.28E-22 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Amir_1149 b8efe284d766e567b8524def2f1521e5 400 Gene3D G3DSA:3.40.630.30 2 132 1.3E-29 T 14-10-2018 Amir_1149 b8efe284d766e567b8524def2f1521e5 400 Pfam PF13527 Acetyltransferase (GNAT) domain 6 129 4.1E-24 T 14-10-2018 Amir_1149 b8efe284d766e567b8524def2f1521e5 400 SUPERFAMILY SSF55729 10 294 7.15E-47 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_4428 a7e9c0fb023e06a616afdb6c375efaa8 312 Gene3D G3DSA:3.90.25.10 162 302 1.1E-76 T 14-10-2018 Amir_4428 a7e9c0fb023e06a616afdb6c375efaa8 312 SUPERFAMILY SSF51735 5 277 1.72E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4428 a7e9c0fb023e06a616afdb6c375efaa8 312 Pfam PF05368 NmrA-like family 5 250 4.8E-34 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 Amir_4428 a7e9c0fb023e06a616afdb6c375efaa8 312 Gene3D G3DSA:3.40.50.720 5 295 1.1E-76 T 14-10-2018 Amir_5469 52a7198af7163b007f491f985f0219f3 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 437 3.5E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5469 52a7198af7163b007f491f985f0219f3 456 SMART SM00387 345 454 5.2E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5469 52a7198af7163b007f491f985f0219f3 456 SUPERFAMILY SSF55874 296 451 1.57E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5469 52a7198af7163b007f491f985f0219f3 456 SMART SM00304 187 240 1.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5469 52a7198af7163b007f491f985f0219f3 456 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 305 1.0E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_5469 52a7198af7163b007f491f985f0219f3 456 SUPERFAMILY SSF47384 224 305 2.35E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_5469 52a7198af7163b007f491f985f0219f3 456 Gene3D G3DSA:1.10.287.130 191 307 3.4E-24 T 14-10-2018 Amir_5469 52a7198af7163b007f491f985f0219f3 456 Gene3D G3DSA:3.30.565.10 313 452 3.6E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5469 52a7198af7163b007f491f985f0219f3 456 SMART SM00388 241 306 7.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_5469 52a7198af7163b007f491f985f0219f3 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 5.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5469 52a7198af7163b007f491f985f0219f3 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 5.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5469 52a7198af7163b007f491f985f0219f3 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 451 5.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5469 52a7198af7163b007f491f985f0219f3 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 5.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_6464 1709319a3cd925a49e3d88572d01a7e1 583 Gene3D G3DSA:4.10.80.40 542 579 1.8E-6 T 14-10-2018 Amir_6464 1709319a3cd925a49e3d88572d01a7e1 583 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 583 3.9E-251 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_6464 1709319a3cd925a49e3d88572d01a7e1 583 Gene3D G3DSA:1.20.58.100 427 541 7.9E-35 T 14-10-2018 Amir_6464 1709319a3cd925a49e3d88572d01a7e1 583 SUPERFAMILY SSF51905 2 429 8.92E-74 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6464 1709319a3cd925a49e3d88572d01a7e1 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 378 385 1.3E-5 T 14-10-2018 Amir_6464 1709319a3cd925a49e3d88572d01a7e1 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.3E-5 T 14-10-2018 Amir_6464 1709319a3cd925a49e3d88572d01a7e1 583 PIRSF PIRSF000171 1 575 1.4E-44 T 14-10-2018 Amir_6464 1709319a3cd925a49e3d88572d01a7e1 583 Gene3D G3DSA:3.50.50.60 7 411 3.8E-158 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6464 1709319a3cd925a49e3d88572d01a7e1 583 Gene3D G3DSA:3.90.700.10 246 349 3.8E-158 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_6464 1709319a3cd925a49e3d88572d01a7e1 583 SUPERFAMILY SSF56425 236 354 2.99E-40 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_6464 1709319a3cd925a49e3d88572d01a7e1 583 SUPERFAMILY SSF46977 446 583 1.44E-47 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_6464 1709319a3cd925a49e3d88572d01a7e1 583 Pfam PF00890 FAD binding domain 7 400 1.3E-113 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_6464 1709319a3cd925a49e3d88572d01a7e1 583 Pfam PF02910 Fumarate reductase flavoprotein C-term 454 583 1.8E-44 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_6464 1709319a3cd925a49e3d88572d01a7e1 583 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 4 583 6.3E-282 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_6464 1709319a3cd925a49e3d88572d01a7e1 583 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 40 49 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_5439 391ca2a4ef91c16a86c75512eaf346c7 592 Gene3D G3DSA:3.40.50.300 1 251 3.8E-36 T 14-10-2018 Amir_5439 391ca2a4ef91c16a86c75512eaf346c7 592 Gene3D G3DSA:3.40.50.300 276 575 8.0E-54 T 14-10-2018 Amir_5439 391ca2a4ef91c16a86c75512eaf346c7 592 SUPERFAMILY SSF52540 5 529 2.73E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5439 391ca2a4ef91c16a86c75512eaf346c7 592 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 574 1.9E-173 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Amir_5439 391ca2a4ef91c16a86c75512eaf346c7 592 SUPERFAMILY SSF52540 2 221 1.27E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5439 391ca2a4ef91c16a86c75512eaf346c7 592 PIRSF PIRSF003128 1 579 1.4E-156 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Amir_5439 391ca2a4ef91c16a86c75512eaf346c7 592 Pfam PF02463 RecF/RecN/SMC N terminal domain 7 534 2.2E-16 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Amir_4633 9aa066a887e47bd2500ab9930e282095 315 Gene3D G3DSA:3.40.50.1100 16 303 2.0E-82 T 14-10-2018 Amir_4633 9aa066a887e47bd2500ab9930e282095 315 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 300 3.1E-62 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amir_4633 9aa066a887e47bd2500ab9930e282095 315 Gene3D G3DSA:3.40.50.1100 48 144 2.0E-82 T 14-10-2018 Amir_4633 9aa066a887e47bd2500ab9930e282095 315 SUPERFAMILY SSF53686 5 303 2.62E-70 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Pfam PF08990 Erythronolide synthase docking 3 27 8.5E-7 T 14-10-2018 IPR015083 Polyketide synthase, docking domain GO:0016740|GO:0048037 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Gene3D G3DSA:3.40.47.10 2050 2477 4.6E-140 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 847 932 1.1E-11 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2309 2416 1.6E-31 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Gene3D G3DSA:3.40.50.11460 1523 1713 6.1E-45 T 14-10-2018 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SUPERFAMILY SSF51735 1718 1828 3.11E-7 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Gene3D G3DSA:3.40.47.10 166 224 3.8E-11 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SUPERFAMILY SSF47336 1910 1998 4.19E-21 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SUPERFAMILY SSF51735 3093 3307 1.09E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SUPERFAMILY SSF55048 1210 1269 4.84E-9 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SUPERFAMILY SSF52151 2573 2857 1.23E-57 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Gene3D G3DSA:3.40.50.720 2916 3344 1.7E-95 T 14-10-2018 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SUPERFAMILY SSF53901 31 253 1.1E-36 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Gene3D G3DSA:3.40.47.10 630 809 2.8E-56 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 51 166 1.6E-28 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 633 745 1.9E-27 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2061 2301 4.2E-62 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 749 804 2.7E-16 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Gene3D G3DSA:3.40.366.10 2574 2872 3.8E-131 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Gene3D G3DSA:3.40.366.10 1084 1381 3.5E-140 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Gene3D G3DSA:3.30.70.3290 998 1420 3.5E-140 T 14-10-2018 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SUPERFAMILY SSF52151 1082 1369 7.06E-58 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Gene3D G3DSA:3.40.366.20 254 611 2.1E-77 T 14-10-2018 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Pfam PF08659 KR domain 1726 1829 1.9E-5 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Pfam PF08659 KR domain 3097 3275 1.1E-52 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SUPERFAMILY SSF53901 2059 2415 8.66E-79 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SUPERFAMILY SSF51735 1524 1709 1.3E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SMART SM01294 1918 1985 4.9E-5 T 14-10-2018 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3097 3277 2.7E-47 T 14-10-2018 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1086 1378 1.3E-89 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 2576 2883 5.8E-87 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 387 573 2.8E-13 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SUPERFAMILY SSF51735 2924 3084 3.35E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SMART SM00823 Phosphopantetheine attachment site 1917 1989 2.9E-27 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Gene3D G3DSA:3.40.47.10 12 165 5.0E-35 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SUPERFAMILY SSF55048 2699 2758 6.93E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 245 327 1.3E-7 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2421 2539 2.3E-13 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 939 1048 5.6E-9 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Pfam PF00698 Acyl transferase domain 385 504 1.0E-28 T 14-10-2018 IPR014043 Acyl transferase Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Pfam PF00698 Acyl transferase domain 2575 2887 1.9E-45 T 14-10-2018 IPR014043 Acyl transferase Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Pfam PF00698 Acyl transferase domain 1084 1397 8.6E-70 T 14-10-2018 IPR014043 Acyl transferase Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SMART SM00825 Beta-ketoacyl synthase 2063 2476 1.6E-135 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SMART SM00825 Beta-ketoacyl synthase 36 265 1.3E-21 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SMART SM00825 Beta-ketoacyl synthase 635 982 5.6E-75 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 2218 2234 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SUPERFAMILY SSF52151 384 562 1.8E-30 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Pfam PF00550 Phosphopantetheine attachment site 1919 1985 7.4E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Gene3D G3DSA:3.40.47.10 814 997 3.5E-35 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Gene3D G3DSA:3.30.70.3290 2491 2912 3.8E-131 T 14-10-2018 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 SUPERFAMILY SSF53901 630 925 3.61E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Gene3D G3DSA:1.10.1200.10 1897 1989 2.2E-31 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4356 3f0c047cf41419ec96b8225f84586941 3400 Gene3D G3DSA:3.40.50.720 1749 1833 4.5E-7 T 14-10-2018 Amir_0598 928544f89a47de1ab53f2ba7f2883f4f 283 Gene3D G3DSA:1.10.443.10 68 279 1.1E-24 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amir_0598 928544f89a47de1ab53f2ba7f2883f4f 283 Pfam PF00589 Phage integrase family 66 263 6.5E-8 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amir_0598 928544f89a47de1ab53f2ba7f2883f4f 283 SUPERFAMILY SSF56349 13 265 1.41E-25 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amir_0676 f012b8175333f78040159fdff95fa9f0 541 Gene3D G3DSA:3.90.76.10 66 201 7.6E-106 T 14-10-2018 Amir_0676 f012b8175333f78040159fdff95fa9f0 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 461 1.0E-65 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Amir_0676 f012b8175333f78040159fdff95fa9f0 541 Gene3D G3DSA:3.10.105.10 302 513 7.6E-106 T 14-10-2018 Amir_0676 f012b8175333f78040159fdff95fa9f0 541 Gene3D G3DSA:3.40.190.10 47 515 7.6E-106 T 14-10-2018 Amir_0676 f012b8175333f78040159fdff95fa9f0 541 PIRSF PIRSF002741 1 531 8.3E-80 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amir_0676 f012b8175333f78040159fdff95fa9f0 541 SUPERFAMILY SSF53850 37 539 8.14E-102 T 14-10-2018 Amir_5339 d8dba95cbe2a14183781550a8ec20dc2 875 Gene3D G3DSA:2.60.40.290 768 875 2.6E-36 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_5339 d8dba95cbe2a14183781550a8ec20dc2 875 Pfam PF02927 Cellulase N-terminal ig-like domain 207 286 3.5E-20 T 14-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 Amir_5339 d8dba95cbe2a14183781550a8ec20dc2 875 SMART SM00637 773 872 2.1E-43 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_5339 d8dba95cbe2a14183781550a8ec20dc2 875 SUPERFAMILY SSF49384 769 873 6.98E-32 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_5339 d8dba95cbe2a14183781550a8ec20dc2 875 Pfam PF00759 Glycosyl hydrolase family 9 300 755 4.1E-101 T 14-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Amir_5339 d8dba95cbe2a14183781550a8ec20dc2 875 SUPERFAMILY SSF49785 52 193 7.01E-32 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5339 d8dba95cbe2a14183781550a8ec20dc2 875 SUPERFAMILY SSF81296 207 294 7.7E-20 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_5339 d8dba95cbe2a14183781550a8ec20dc2 875 Gene3D G3DSA:2.60.40.10 205 294 8.5E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_5339 d8dba95cbe2a14183781550a8ec20dc2 875 Gene3D G3DSA:2.60.120.260 47 194 8.2E-34 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5339 d8dba95cbe2a14183781550a8ec20dc2 875 Pfam PF00553 Cellulose binding domain 773 872 1.7E-28 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_5339 d8dba95cbe2a14183781550a8ec20dc2 875 ProSitePatterns PS00698 Glycosyl hydrolases family 9 active sites signature 2. 732 750 - T 14-10-2018 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Amir_5339 d8dba95cbe2a14183781550a8ec20dc2 875 Pfam PF02018 Carbohydrate binding domain 55 177 9.3E-13 T 14-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 Amir_5339 d8dba95cbe2a14183781550a8ec20dc2 875 SUPERFAMILY SSF48208 301 760 5.67E-128 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_5339 d8dba95cbe2a14183781550a8ec20dc2 875 Gene3D G3DSA:1.50.10.10 299 764 4.3E-188 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Amir_2078 80208bdca23960ae0c32b04fe3386841 452 Gene3D G3DSA:3.40.605.10 4 448 9.8E-169 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_2078 80208bdca23960ae0c32b04fe3386841 452 Gene3D G3DSA:3.40.309.10 235 420 9.8E-169 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_2078 80208bdca23960ae0c32b04fe3386841 452 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 256 267 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Amir_2078 80208bdca23960ae0c32b04fe3386841 452 Pfam PF00171 Aldehyde dehydrogenase family 4 448 2.8E-159 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_2078 80208bdca23960ae0c32b04fe3386841 452 SUPERFAMILY SSF53720 4 450 3.4E-155 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_2078 80208bdca23960ae0c32b04fe3386841 452 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 228 235 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Amir_4058 cb04d90590ae6781b5a4820e49e1c75b 258 Gene3D G3DSA:3.60.15.10 1 258 1.2E-52 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_4058 cb04d90590ae6781b5a4820e49e1c75b 258 Pfam PF00753 Metallo-beta-lactamase superfamily 20 205 1.0E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_4058 cb04d90590ae6781b5a4820e49e1c75b 258 SMART SM00849 19 249 7.9E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_4058 cb04d90590ae6781b5a4820e49e1c75b 258 SUPERFAMILY SSF56281 2 253 1.62E-29 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_5916 b12ca70382ceb08e2aa5aa66db396cc9 506 SUPERFAMILY SSF54211 6 170 4.55E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_5916 b12ca70382ceb08e2aa5aa66db396cc9 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 405 500 1.0E-24 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain Amir_5916 b12ca70382ceb08e2aa5aa66db396cc9 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 500 1.4E-136 T 14-10-2018 IPR004482 Mg chelatase-related protein Amir_5916 b12ca70382ceb08e2aa5aa66db396cc9 506 SUPERFAMILY SSF52540 191 500 1.25E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5916 b12ca70382ceb08e2aa5aa66db396cc9 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 191 395 1.2E-81 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain Amir_5916 b12ca70382ceb08e2aa5aa66db396cc9 506 SMART SM00382 211 393 7.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5916 b12ca70382ceb08e2aa5aa66db396cc9 506 Gene3D G3DSA:3.30.230.10 6 170 2.3E-12 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amir_5916 b12ca70382ceb08e2aa5aa66db396cc9 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 141 3.0E-34 T 14-10-2018 Amir_5916 b12ca70382ceb08e2aa5aa66db396cc9 506 Gene3D G3DSA:3.40.50.300 192 504 7.5E-44 T 14-10-2018 Amir_2377 724bdbd670dec0c89a26d9ed1f2c386e 283 SUPERFAMILY SSF47413 36 89 8.0E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2377 724bdbd670dec0c89a26d9ed1f2c386e 283 Pfam PF13560 Helix-turn-helix domain 15 94 2.0E-14 T 14-10-2018 Amir_2377 724bdbd670dec0c89a26d9ed1f2c386e 283 Gene3D G3DSA:1.10.260.40 37 100 1.8E-8 T 14-10-2018 Amir_2377 724bdbd670dec0c89a26d9ed1f2c386e 283 SMART SM00530 19 91 6.1E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_3763 73c5b70c31ff329fa5658f8d94190f04 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 18 31 6.4E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3763 73c5b70c31ff329fa5658f8d94190f04 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 7 18 6.4E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3763 73c5b70c31ff329fa5658f8d94190f04 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 42 62 6.4E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3763 73c5b70c31ff329fa5658f8d94190f04 132 SMART SM00422 6 75 8.7E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3763 73c5b70c31ff329fa5658f8d94190f04 132 Pfam PF13411 MerR HTH family regulatory protein 7 74 1.9E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3763 73c5b70c31ff329fa5658f8d94190f04 132 SUPERFAMILY SSF46955 7 109 5.49E-19 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_3763 73c5b70c31ff329fa5658f8d94190f04 132 Gene3D G3DSA:1.10.1660.10 7 125 3.0E-23 T 14-10-2018 Amir_6215 8b1743b4678a689118a748cb5ba5abf3 279 SUPERFAMILY SSF53850 99 258 4.81E-16 T 14-10-2018 Amir_6215 8b1743b4678a689118a748cb5ba5abf3 279 Pfam PF03466 LysR substrate binding domain 101 257 1.8E-13 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_6215 8b1743b4678a689118a748cb5ba5abf3 279 Gene3D G3DSA:3.40.190.10 107 154 3.3E-16 T 14-10-2018 Amir_6215 8b1743b4678a689118a748cb5ba5abf3 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_6215 8b1743b4678a689118a748cb5ba5abf3 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_6215 8b1743b4678a689118a748cb5ba5abf3 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_6215 8b1743b4678a689118a748cb5ba5abf3 279 Gene3D G3DSA:3.40.190.10 155 254 3.3E-16 T 14-10-2018 Amir_6215 8b1743b4678a689118a748cb5ba5abf3 279 Gene3D G3DSA:1.10.10.10 1 83 1.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6215 8b1743b4678a689118a748cb5ba5abf3 279 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 9.3E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_6215 8b1743b4678a689118a748cb5ba5abf3 279 SUPERFAMILY SSF46785 2 81 1.49E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0864 0fb95ab61cbb19a4a3ba237589a556f9 462 Pfam PF00675 Insulinase (Peptidase family M16) 83 192 1.8E-7 T 14-10-2018 IPR011765 Peptidase M16, N-terminal Amir_0864 0fb95ab61cbb19a4a3ba237589a556f9 462 Gene3D G3DSA:3.30.830.10 39 248 2.5E-33 T 14-10-2018 Amir_0864 0fb95ab61cbb19a4a3ba237589a556f9 462 SUPERFAMILY SSF63411 46 249 2.2E-32 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amir_0864 0fb95ab61cbb19a4a3ba237589a556f9 462 SUPERFAMILY SSF63411 265 459 1.08E-31 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amir_0864 0fb95ab61cbb19a4a3ba237589a556f9 462 Gene3D G3DSA:3.30.830.10 258 448 5.5E-37 T 14-10-2018 Amir_0864 0fb95ab61cbb19a4a3ba237589a556f9 462 Pfam PF05193 Peptidase M16 inactive domain 203 377 2.9E-16 T 14-10-2018 IPR007863 Peptidase M16, C-terminal Amir_6014 caf481b71946116f0e16b40d6d411269 345 Gene3D G3DSA:3.40.718.10 1 338 8.1E-129 T 14-10-2018 Amir_6014 caf481b71946116f0e16b40d6d411269 345 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 3 317 7.4E-86 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Amir_6014 caf481b71946116f0e16b40d6d411269 345 Hamap MF_01035 3-isopropylmalate dehydrogenase [leuB]. 1 338 57.653 T 14-10-2018 IPR023698 3-isopropylmalate dehydrogenase GO:0003862|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Amir_6014 caf481b71946116f0e16b40d6d411269 345 SMART SM01329 2 334 2.7E-159 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Amir_6014 caf481b71946116f0e16b40d6d411269 345 SUPERFAMILY SSF53659 2 329 2.88E-107 T 14-10-2018 Amir_6014 caf481b71946116f0e16b40d6d411269 345 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 232 251 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Amir_0756 c9a3b902bdb602ecc5cef8872124beda 321 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 318 9.3E-70 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Amir_0756 c9a3b902bdb602ecc5cef8872124beda 321 Pfam PF00579 tRNA synthetases class I (W and Y) 5 275 3.1E-51 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_0756 c9a3b902bdb602ecc5cef8872124beda 321 Gene3D G3DSA:3.40.50.620 4 313 1.4E-97 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_0756 c9a3b902bdb602ecc5cef8872124beda 321 Gene3D G3DSA:1.10.240.10 180 288 1.4E-97 T 14-10-2018 Amir_0756 c9a3b902bdb602ecc5cef8872124beda 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 1.3E-12 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Amir_0756 c9a3b902bdb602ecc5cef8872124beda 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 189 199 1.3E-12 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Amir_0756 c9a3b902bdb602ecc5cef8872124beda 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 60 79 1.3E-12 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Amir_0756 c9a3b902bdb602ecc5cef8872124beda 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 136 157 1.3E-12 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Amir_0756 c9a3b902bdb602ecc5cef8872124beda 321 SUPERFAMILY SSF52374 3 319 6.75E-66 T 14-10-2018 Amir_3929 37f02218769cd70d17c477f4932ac236 410 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 317 394 2.5E-9 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Amir_3929 37f02218769cd70d17c477f4932ac236 410 Gene3D G3DSA:3.30.1360.120 77 406 2.3E-47 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Amir_3929 37f02218769cd70d17c477f4932ac236 410 Pfam PF01571 Aminomethyltransferase folate-binding domain 86 307 4.6E-22 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Amir_3929 37f02218769cd70d17c477f4932ac236 410 PIRSF PIRSF006487 73 408 5.5E-32 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Amir_3929 37f02218769cd70d17c477f4932ac236 410 SUPERFAMILY SSF101790 333 395 3.6E-9 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Amir_3929 37f02218769cd70d17c477f4932ac236 410 SUPERFAMILY SSF103025 87 329 1.83E-31 T 14-10-2018 Amir_5725 9103c424d2487a7873734eedfe2a8445 519 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 420 4.0E-67 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Amir_5725 9103c424d2487a7873734eedfe2a8445 519 PIRSF PIRSF002741 4 511 3.0E-77 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amir_5725 9103c424d2487a7873734eedfe2a8445 519 Gene3D G3DSA:3.40.190.10 51 489 5.3E-111 T 14-10-2018 Amir_5725 9103c424d2487a7873734eedfe2a8445 519 SUPERFAMILY SSF53850 36 498 6.33E-105 T 14-10-2018 Amir_5725 9103c424d2487a7873734eedfe2a8445 519 Gene3D G3DSA:3.10.105.10 257 488 5.3E-111 T 14-10-2018 Amir_2777 281c8990a1f7db247370d81904500f37 608 Pfam PF00005 ABC transporter 359 505 1.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2777 281c8990a1f7db247370d81904500f37 608 Pfam PF00664 ABC transporter transmembrane region 28 294 9.3E-34 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_2777 281c8990a1f7db247370d81904500f37 608 SUPERFAMILY SSF52540 343 573 5.13E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2777 281c8990a1f7db247370d81904500f37 608 Gene3D G3DSA:1.20.1560.10 1 327 3.2E-64 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_2777 281c8990a1f7db247370d81904500f37 608 Gene3D G3DSA:3.40.50.300 337 580 3.0E-76 T 14-10-2018 Amir_2777 281c8990a1f7db247370d81904500f37 608 SMART SM00382 367 551 2.6E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2777 281c8990a1f7db247370d81904500f37 608 SUPERFAMILY SSF90123 14 319 1.31E-58 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_2777 281c8990a1f7db247370d81904500f37 608 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3184 08a12004fc40439e312cc875aa9dfecf 441 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 7.8E-7 T 14-10-2018 Amir_3184 08a12004fc40439e312cc875aa9dfecf 441 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 7.8E-7 T 14-10-2018 Amir_3184 08a12004fc40439e312cc875aa9dfecf 441 Pfam PF04820 Tryptophan halogenase 102 358 1.5E-19 T 14-10-2018 IPR006905 Flavin-dependent halogenase Amir_3184 08a12004fc40439e312cc875aa9dfecf 441 Pfam PF04820 Tryptophan halogenase 5 76 9.9E-10 T 14-10-2018 IPR006905 Flavin-dependent halogenase Amir_3184 08a12004fc40439e312cc875aa9dfecf 441 SUPERFAMILY SSF51905 2 357 2.47E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3184 08a12004fc40439e312cc875aa9dfecf 441 Gene3D G3DSA:3.50.50.60 1 409 1.6E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3126 eca5992b20ae40e01a63db825a285241 147 Pfam PF01565 FAD binding domain 37 87 1.5E-5 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Amir_3126 eca5992b20ae40e01a63db825a285241 147 Pfam PF01565 FAD binding domain 88 141 2.9E-7 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Amir_3126 eca5992b20ae40e01a63db825a285241 147 SUPERFAMILY SSF56176 15 144 5.61E-25 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amir_3126 eca5992b20ae40e01a63db825a285241 147 Gene3D G3DSA:3.30.43.10 11 100 7.3E-22 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Amir_5811 a829f960bd88c4a7ed5d11e9bf889b90 250 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 5 238 26.602 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Amir_5811 a829f960bd88c4a7ed5d11e9bf889b90 250 Gene3D G3DSA:3.30.1360.170 25 232 2.0E-60 T 14-10-2018 Amir_5811 a829f960bd88c4a7ed5d11e9bf889b90 250 SUPERFAMILY SSF69796 28 235 1.7E-61 T 14-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Amir_5811 a829f960bd88c4a7ed5d11e9bf889b90 250 Pfam PF02511 Thymidylate synthase complementing protein 31 224 9.4E-55 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Amir_5811 a829f960bd88c4a7ed5d11e9bf889b90 250 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 8 230 4.4E-59 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Amir_6757 aa56fd709396c54acc077412b24eaf17 417 TIGRFAM TIGR03449 mycothiol_MshA: D-inositol-3-phosphate glycosyltransferase 3 407 1.2E-197 T 14-10-2018 IPR017814 Mycothiol biosynthesis protein, MshA GO:0008375|GO:0010125 Amir_6757 aa56fd709396c54acc077412b24eaf17 417 Gene3D G3DSA:3.40.50.2000 7 404 7.7E-129 T 14-10-2018 Amir_6757 aa56fd709396c54acc077412b24eaf17 417 Gene3D G3DSA:3.40.50.2000 199 388 7.7E-129 T 14-10-2018 Amir_6757 aa56fd709396c54acc077412b24eaf17 417 Pfam PF00534 Glycosyl transferases group 1 209 384 2.2E-31 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Amir_6757 aa56fd709396c54acc077412b24eaf17 417 SUPERFAMILY SSF53756 21 406 6.0E-82 T 14-10-2018 Amir_6757 aa56fd709396c54acc077412b24eaf17 417 Hamap MF_01695 D-inositol-3-phosphate glycosyltransferase [mshA]. 2 412 52.719 T 14-10-2018 IPR017814 Mycothiol biosynthesis protein, MshA GO:0008375|GO:0010125 Amir_6757 aa56fd709396c54acc077412b24eaf17 417 Pfam PF13439 Glycosyltransferase Family 4 22 202 2.8E-33 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amir_2518 631dbbfd30929441f605627013fa7c36 151 Gene3D G3DSA:3.30.1330.40 1 149 7.6E-54 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_2518 631dbbfd30929441f605627013fa7c36 151 SUPERFAMILY SSF55298 3 148 1.57E-48 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_2518 631dbbfd30929441f605627013fa7c36 151 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 5 146 3.1E-26 T 14-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like Amir_4399 0b665d0d491136c4f14c0bab0aaf4726 200 SUPERFAMILY SSF46689 5 81 7.7E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4399 0b665d0d491136c4f14c0bab0aaf4726 200 Gene3D G3DSA:1.10.357.10 72 199 7.0E-31 T 14-10-2018 Amir_4399 0b665d0d491136c4f14c0bab0aaf4726 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 60 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_4399 0b665d0d491136c4f14c0bab0aaf4726 200 SUPERFAMILY SSF48498 87 198 2.89E-25 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4399 0b665d0d491136c4f14c0bab0aaf4726 200 Gene3D G3DSA:1.10.10.60 4 71 5.5E-28 T 14-10-2018 Amir_4399 0b665d0d491136c4f14c0bab0aaf4726 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 62 2.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_7012 e6e02f625a1e8b96ca85aff0ee49e80c 261 ProSitePatterns PS01229 Hypothetical cof family signature 2. 211 233 - T 14-10-2018 Amir_7012 e6e02f625a1e8b96ca85aff0ee49e80c 261 SUPERFAMILY SSF56784 4 261 2.63E-45 T 14-10-2018 IPR036412 HAD-like superfamily Amir_7012 e6e02f625a1e8b96ca85aff0ee49e80c 261 Gene3D G3DSA:3.40.50.1000 187 257 5.6E-29 T 14-10-2018 IPR023214 HAD superfamily Amir_7012 e6e02f625a1e8b96ca85aff0ee49e80c 261 Pfam PF08282 haloacid dehalogenase-like hydrolase 179 257 1.7E-24 T 14-10-2018 Amir_7012 e6e02f625a1e8b96ca85aff0ee49e80c 261 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 96 5.6E-12 T 14-10-2018 Amir_7012 e6e02f625a1e8b96ca85aff0ee49e80c 261 Gene3D G3DSA:3.40.50.1000 2 114 9.7E-14 T 14-10-2018 IPR023214 HAD superfamily Amir_7012 e6e02f625a1e8b96ca85aff0ee49e80c 261 Gene3D G3DSA:3.30.1240.10 176 186 5.6E-29 T 14-10-2018 Amir_3179 465210406a61df6ee11fb9268411ab31 1593 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 198 214 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_3179 465210406a61df6ee11fb9268411ab31 1593 Pfam PF08990 Erythronolide synthase docking 6 29 6.7E-11 T 14-10-2018 IPR015083 Polyketide synthase, docking domain GO:0016740|GO:0048037 Amir_3179 465210406a61df6ee11fb9268411ab31 1593 Pfam PF00550 Phosphopantetheine attachment site 1431 1497 1.2E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3179 465210406a61df6ee11fb9268411ab31 1593 SUPERFAMILY SSF55048 685 735 3.79E-9 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_3179 465210406a61df6ee11fb9268411ab31 1593 Gene3D G3DSA:3.30.70.3290 477 895 2.2E-142 T 14-10-2018 Amir_3179 465210406a61df6ee11fb9268411ab31 1593 SMART SM00825 Beta-ketoacyl synthase 38 463 4.6E-208 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_3179 465210406a61df6ee11fb9268411ab31 1593 Pfam PF08659 KR domain 1147 1325 2.4E-54 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3179 465210406a61df6ee11fb9268411ab31 1593 SUPERFAMILY SSF53901 33 407 1.14E-101 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3179 465210406a61df6ee11fb9268411ab31 1593 SUPERFAMILY SSF52151 556 843 8.37E-68 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3179 465210406a61df6ee11fb9268411ab31 1593 SMART SM01294 1430 1497 1.1E-4 T 14-10-2018 Amir_3179 465210406a61df6ee11fb9268411ab31 1593 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 560 847 2.8E-105 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_3179 465210406a61df6ee11fb9268411ab31 1593 Gene3D G3DSA:1.10.1200.10 1409 1502 8.9E-32 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3179 465210406a61df6ee11fb9268411ab31 1593 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 36 285 1.1E-85 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_3179 465210406a61df6ee11fb9268411ab31 1593 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 415 497 4.9E-11 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3179 465210406a61df6ee11fb9268411ab31 1593 Gene3D G3DSA:3.40.50.720 908 1400 7.4E-149 T 14-10-2018 Amir_3179 465210406a61df6ee11fb9268411ab31 1593 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1147 1327 5.1E-47 T 14-10-2018 Amir_3179 465210406a61df6ee11fb9268411ab31 1593 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1456 1471 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3179 465210406a61df6ee11fb9268411ab31 1593 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 293 410 3.1E-44 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_3179 465210406a61df6ee11fb9268411ab31 1593 Pfam PF00698 Acyl transferase domain 559 865 9.3E-76 T 14-10-2018 IPR014043 Acyl transferase Amir_3179 465210406a61df6ee11fb9268411ab31 1593 SUPERFAMILY SSF47336 1421 1512 1.31E-23 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3179 465210406a61df6ee11fb9268411ab31 1593 Gene3D G3DSA:3.40.47.10 28 475 3.2E-182 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3179 465210406a61df6ee11fb9268411ab31 1593 Gene3D G3DSA:3.40.366.10 558 850 2.2E-142 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_3179 465210406a61df6ee11fb9268411ab31 1593 SUPERFAMILY SSF51735 956 1135 2.76E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3179 465210406a61df6ee11fb9268411ab31 1593 SMART SM00823 Phosphopantetheine attachment site 1429 1501 1.0E-31 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3179 465210406a61df6ee11fb9268411ab31 1593 SUPERFAMILY SSF51735 1142 1386 2.68E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3806 a998fc4d885753fb2f126db919bae6de 334 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 305 320 8.4E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3806 a998fc4d885753fb2f126db919bae6de 334 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 290 305 8.4E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3806 a998fc4d885753fb2f126db919bae6de 334 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 257 272 8.4E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3806 a998fc4d885753fb2f126db919bae6de 334 SUPERFAMILY SSF46785 256 328 2.23E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3806 a998fc4d885753fb2f126db919bae6de 334 Pfam PF12840 Helix-turn-helix domain 258 314 2.1E-12 T 14-10-2018 Amir_3806 a998fc4d885753fb2f126db919bae6de 334 SMART SM00418 255 329 1.9E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3806 a998fc4d885753fb2f126db919bae6de 334 Gene3D G3DSA:1.10.10.10 248 328 3.2E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5856 e0b85dc6ad45dd512272bff148dd1bd1 419 Gene3D G3DSA:3.40.1010.10 325 402 2.7E-6 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amir_5856 e0b85dc6ad45dd512272bff148dd1bd1 419 SUPERFAMILY SSF53790 324 406 3.27E-9 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amir_5856 e0b85dc6ad45dd512272bff148dd1bd1 419 Pfam PF11760 Cobalamin synthesis G N-terminal 37 106 5.4E-13 T 14-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Amir_5856 e0b85dc6ad45dd512272bff148dd1bd1 419 SUPERFAMILY SSF159672 3 199 2.88E-23 T 14-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Amir_5856 e0b85dc6ad45dd512272bff148dd1bd1 419 Gene3D G3DSA:3.40.50.11220 5 105 2.0E-9 T 14-10-2018 Amir_5856 e0b85dc6ad45dd512272bff148dd1bd1 419 Pfam PF01890 Cobalamin synthesis G C-terminus 193 320 7.4E-22 T 14-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 Amir_5856 e0b85dc6ad45dd512272bff148dd1bd1 419 SUPERFAMILY SSF159664 186 321 9.03E-21 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 Amir_5856 e0b85dc6ad45dd512272bff148dd1bd1 419 Gene3D G3DSA:3.30.420.180 182 324 9.1E-28 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 Amir_1992 f95c4ee5bf49c53b9a1618a66594028b 196 Gene3D G3DSA:1.20.120.20 11 163 5.6E-6 T 14-10-2018 Amir_1992 f95c4ee5bf49c53b9a1618a66594028b 196 Pfam PF12277 Protein of unknown function (DUF3618) 9 53 6.2E-13 T 14-10-2018 IPR022062 Protein of unknown function DUF3618 Amir_1992 f95c4ee5bf49c53b9a1618a66594028b 196 SUPERFAMILY SSF58113 12 142 6.54E-5 T 14-10-2018 Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 134 146 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 SMART SM00220 11 274 5.8E-66 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 Pfam PF03793 PASTA domain 471 535 3.8E-11 T 14-10-2018 IPR005543 PASTA domain Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 Pfam PF03793 PASTA domain 604 668 1.7E-8 T 14-10-2018 IPR005543 PASTA domain Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 Pfam PF03793 PASTA domain 540 600 3.4E-11 T 14-10-2018 IPR005543 PASTA domain Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 Pfam PF03793 PASTA domain 395 465 1.1E-8 T 14-10-2018 IPR005543 PASTA domain Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 Gene3D G3DSA:3.30.10.20 600 669 2.6E-11 T 14-10-2018 Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 Gene3D G3DSA:3.30.10.20 391 465 1.2E-11 T 14-10-2018 Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 17 40 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 Gene3D G3DSA:3.30.200.20 1 94 2.6E-35 T 14-10-2018 Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 SMART SM00740 391 466 5.5E-8 T 14-10-2018 IPR005543 PASTA domain Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 SMART SM00740 467 535 1.2E-12 T 14-10-2018 IPR005543 PASTA domain Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 SMART SM00740 601 669 4.3E-4 T 14-10-2018 IPR005543 PASTA domain Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 SMART SM00740 536 600 3.7E-13 T 14-10-2018 IPR005543 PASTA domain Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 Gene3D G3DSA:1.10.510.10 96 283 1.1E-54 T 14-10-2018 Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 Gene3D G3DSA:3.30.10.20 537 599 1.5E-16 T 14-10-2018 Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 Gene3D G3DSA:3.30.10.20 468 535 5.5E-13 T 14-10-2018 Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 Pfam PF00069 Protein kinase domain 11 264 1.5E-51 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_0021 52726ffd12af6eaae4555255cff1b1a4 681 SUPERFAMILY SSF56112 8 278 6.74E-77 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_1772 b4059f285ac6cac7f9058b4d6c55fcc8 580 Gene3D G3DSA:3.90.1150.10 17 353 3.2E-53 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_1772 b4059f285ac6cac7f9058b4d6c55fcc8 580 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 396 486 1.0E-16 T 14-10-2018 IPR013559 YheO-like Amir_1772 b4059f285ac6cac7f9058b4d6c55fcc8 580 SUPERFAMILY SSF53383 16 360 4.18E-52 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_1772 b4059f285ac6cac7f9058b4d6c55fcc8 580 Pfam PF08348 YheO-like PAS domain 386 486 6.0E-28 T 14-10-2018 IPR013559 YheO-like Amir_1772 b4059f285ac6cac7f9058b4d6c55fcc8 580 Pfam PF00266 Aminotransferase class-V 28 329 4.9E-18 T 14-10-2018 IPR000192 Aminotransferase class V domain Amir_1772 b4059f285ac6cac7f9058b4d6c55fcc8 580 Gene3D G3DSA:3.40.640.10 27 271 3.2E-53 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_1772 b4059f285ac6cac7f9058b4d6c55fcc8 580 Pfam PF13309 HTH domain 514 572 2.5E-18 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain Amir_5911 4d2d321a45fcc06acf78dd87d396420c 304 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 42.147 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5911 4d2d321a45fcc06acf78dd87d396420c 304 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 224 8.6E-108 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5911 4d2d321a45fcc06acf78dd87d396420c 304 SUPERFAMILY SSF52313 6 225 4.05E-93 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Amir_5911 4d2d321a45fcc06acf78dd87d396420c 304 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.7E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_5911 4d2d321a45fcc06acf78dd87d396420c 304 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.7E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_5911 4d2d321a45fcc06acf78dd87d396420c 304 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.7E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_5911 4d2d321a45fcc06acf78dd87d396420c 304 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.7E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_5911 4d2d321a45fcc06acf78dd87d396420c 304 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.7E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_5911 4d2d321a45fcc06acf78dd87d396420c 304 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.7E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_5911 4d2d321a45fcc06acf78dd87d396420c 304 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Amir_5911 4d2d321a45fcc06acf78dd87d396420c 304 Gene3D G3DSA:3.40.50.10490 8 219 5.9E-91 T 14-10-2018 Amir_5911 4d2d321a45fcc06acf78dd87d396420c 304 Pfam PF00318 Ribosomal protein S2 9 224 1.2E-95 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_5911 4d2d321a45fcc06acf78dd87d396420c 304 Gene3D G3DSA:1.10.287.610 103 150 5.9E-91 T 14-10-2018 Amir_0928 c9963db8df86d537e23ee08db666eb27 876 Pfam PF00570 HRDC domain 806 872 1.0E-19 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Amir_0928 c9963db8df86d537e23ee08db666eb27 876 Gene3D G3DSA:1.10.486.10 601 657 3.9E-34 T 14-10-2018 Amir_0928 c9963db8df86d537e23ee08db666eb27 876 Pfam PF13361 UvrD-like helicase C-terminal domain 279 400 1.9E-15 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Amir_0928 c9963db8df86d537e23ee08db666eb27 876 SUPERFAMILY SSF47819 796 872 1.96E-20 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Amir_0928 c9963db8df86d537e23ee08db666eb27 876 Gene3D G3DSA:1.10.150.80 798 875 1.2E-19 T 14-10-2018 Amir_0928 c9963db8df86d537e23ee08db666eb27 876 SMART SM00341 802 875 1.1E-9 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Amir_0928 c9963db8df86d537e23ee08db666eb27 876 Gene3D G3DSA:3.40.50.300 658 751 3.9E-34 T 14-10-2018 Amir_0928 c9963db8df86d537e23ee08db666eb27 876 Pfam PF13361 UvrD-like helicase C-terminal domain 624 734 1.3E-21 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Amir_0928 c9963db8df86d537e23ee08db666eb27 876 SUPERFAMILY SSF52540 1 405 4.48E-98 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0928 c9963db8df86d537e23ee08db666eb27 876 Gene3D G3DSA:3.40.50.300 281 385 1.7E-28 T 14-10-2018 Amir_0928 c9963db8df86d537e23ee08db666eb27 876 Gene3D G3DSA:3.40.50.300 8 274 1.1E-73 T 14-10-2018 Amir_0928 c9963db8df86d537e23ee08db666eb27 876 Gene3D G3DSA:1.10.10.160 106 190 1.1E-73 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily Amir_0928 c9963db8df86d537e23ee08db666eb27 876 SUPERFAMILY SSF52540 600 760 1.52E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0928 c9963db8df86d537e23ee08db666eb27 876 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 272 2.4E-46 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Amir_0928 c9963db8df86d537e23ee08db666eb27 876 Gene3D G3DSA:1.10.486.10 386 402 1.7E-28 T 14-10-2018 Amir_4841 972e84779a8fb1f19194feedd584b80a 443 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 335 404 2.5E-6 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Amir_4841 972e84779a8fb1f19194feedd584b80a 443 SUPERFAMILY SSF53756 1 431 1.26E-82 T 14-10-2018 Amir_4841 972e84779a8fb1f19194feedd584b80a 443 Gene3D G3DSA:3.40.50.2000 246 415 4.0E-93 T 14-10-2018 Amir_4841 972e84779a8fb1f19194feedd584b80a 443 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 150 6.5E-9 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_4841 972e84779a8fb1f19194feedd584b80a 443 Gene3D G3DSA:3.40.50.2000 2 416 4.0E-93 T 14-10-2018 Amir_6584 6c7bb98370a86288a2c819fdb049cd10 201 Gene3D G3DSA:1.10.1050.10 6 201 9.6E-74 T 14-10-2018 Amir_6584 6c7bb98370a86288a2c819fdb049cd10 201 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 2.9E-79 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Amir_6584 6c7bb98370a86288a2c819fdb049cd10 201 SUPERFAMILY SSF55174 3 201 9.03E-66 T 14-10-2018 Amir_6584 6c7bb98370a86288a2c819fdb049cd10 201 Pfam PF01479 S4 domain 92 138 1.6E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6584 6c7bb98370a86288a2c819fdb049cd10 201 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 34.828 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Amir_6584 6c7bb98370a86288a2c819fdb049cd10 201 Gene3D G3DSA:3.10.290.10 90 186 9.6E-74 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amir_6584 6c7bb98370a86288a2c819fdb049cd10 201 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 90 4.1E-29 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Amir_6584 6c7bb98370a86288a2c819fdb049cd10 201 SMART SM00363 91 153 4.4E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6584 6c7bb98370a86288a2c819fdb049cd10 201 ProSitePatterns PS00632 Ribosomal protein S4 signature. 89 113 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6584 6c7bb98370a86288a2c819fdb049cd10 201 SMART SM01390 3 90 6.5E-43 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Amir_6139 2b3fd9d10120eb83af426f97ca27c6b1 275 Hamap MF_01416 ATP synthase subunit delta [atpD]. 69 275 15.401 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6139 2b3fd9d10120eb83af426f97ca27c6b1 275 SUPERFAMILY SSF47928 109 184 3.4E-5 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6139 2b3fd9d10120eb83af426f97ca27c6b1 275 PRINTS PR00125 ATP synthase delta subunit signature 103 122 2.3E-11 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6139 2b3fd9d10120eb83af426f97ca27c6b1 275 PRINTS PR00125 ATP synthase delta subunit signature 233 248 2.3E-11 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6139 2b3fd9d10120eb83af426f97ca27c6b1 275 PRINTS PR00125 ATP synthase delta subunit signature 248 266 2.3E-11 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6139 2b3fd9d10120eb83af426f97ca27c6b1 275 Pfam PF00213 ATP synthase delta (OSCP) subunit 109 273 9.1E-36 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6139 2b3fd9d10120eb83af426f97ca27c6b1 275 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 109 273 2.2E-23 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6139 2b3fd9d10120eb83af426f97ca27c6b1 275 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 235 254 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF117074 2405 2497 2.62E-13 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF49464 1252 1339 4.32E-12 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF117074 2625 2709 4.84E-12 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF117074 1124 1214 1.31E-13 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF117074 2964 3040 3.27E-17 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF49452 2744 2800 4.12E-10 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF01345 Domain of unknown function DUF11 501 575 2.3E-6 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 2630 2748 5.6E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 3059 3182 2.6E-29 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 593 708 1.3E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 1779 1886 5.4E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 2537 2629 1.1E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 709 816 3.9E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 817 915 6.6E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 2207 2312 2.5E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 1562 1681 1.0E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 1991 2101 2.6E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 2841 2944 1.5E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 2102 2200 2.3E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 1347 1456 3.6E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 2963 3058 2.5E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 1135 1234 2.6E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 1036 1134 4.8E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 1254 1346 1.6E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 922 1027 1.1E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 1898 1990 6.1E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 2419 2532 2.0E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 2326 2418 1.7E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 1682 1778 2.6E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF13620 Carboxypeptidase regulatory-like domain 1038 1092 4.4E-11 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF13620 Carboxypeptidase regulatory-like domain 2324 2385 6.2E-11 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF13620 Carboxypeptidase regulatory-like domain 2535 2585 9.3E-12 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF13620 Carboxypeptidase regulatory-like domain 1464 1518 4.6E-11 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF13620 Carboxypeptidase regulatory-like domain 2747 2797 2.3E-10 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF13620 Carboxypeptidase regulatory-like domain 1896 1944 2.6E-10 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF13620 Carboxypeptidase regulatory-like domain 825 883 1.2E-8 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF13620 Carboxypeptidase regulatory-like domain 1253 1312 2.4E-10 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF13620 Carboxypeptidase regulatory-like domain 1680 1737 9.1E-12 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF13620 Carboxypeptidase regulatory-like domain 2109 2163 4.0E-8 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF49478 2324 2392 2.55E-11 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.10 1457 1559 1.9E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF117074 2839 2918 4.84E-18 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF49478 2109 2170 5.1E-9 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF117074 1330 1426 1.83E-17 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF117074 2205 2294 4.18E-16 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF117074 1763 1858 2.35E-16 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF117074 690 788 6.15E-16 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF117074 1976 2071 4.97E-13 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF49478 1465 1536 1.41E-12 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF117074 919 1000 4.32E-16 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF17210 SdrD B-like domain 2845 2921 3.2E-15 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF17210 SdrD B-like domain 598 679 9.0E-14 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF17210 SdrD B-like domain 1138 1218 8.5E-14 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF17210 SdrD B-like domain 1566 1643 5.9E-16 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF17210 SdrD B-like domain 2421 2497 1.0E-15 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF17210 SdrD B-like domain 2966 3040 9.1E-15 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF17210 SdrD B-like domain 1350 1425 4.5E-18 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF17210 SdrD B-like domain 2211 2290 3.3E-16 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF17210 SdrD B-like domain 1782 1863 1.1E-16 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF17210 SdrD B-like domain 2633 2713 1.9E-13 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF17210 SdrD B-like domain 924 1003 1.2E-16 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF17210 SdrD B-like domain 712 791 6.1E-16 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF17210 SdrD B-like domain 3064 3163 7.6E-34 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Pfam PF17210 SdrD B-like domain 1994 2075 8.8E-13 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF49464 826 901 1.14E-9 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF117074 3057 3150 1.57E-22 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 503 538 4.5E-10 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3189 3234 3.8E-7 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF49478 1038 1106 3.45E-11 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF49452 2534 2591 8.63E-12 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF49478 1897 1957 9.42E-11 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 Gene3D G3DSA:2.60.40.1120 2749 2810 3.3E-8 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF49478 1681 1743 3.84E-13 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF117074 1559 1642 1.57E-12 T 14-10-2018 Amir_2421 0f4d3a85c95efb416eec976ccd01251f 3373 SUPERFAMILY SSF117074 592 674 3.14E-13 T 14-10-2018 Amir_2267 7d59a4dabeda532c094eea33787264de 561 Pfam PF00270 DEAD/DEAH box helicase 34 202 1.1E-49 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amir_2267 7d59a4dabeda532c094eea33787264de 561 SMART SM00487 29 232 1.4E-63 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_2267 7d59a4dabeda532c094eea33787264de 561 Pfam PF03880 DbpA RNA binding domain 484 555 3.4E-25 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Amir_2267 7d59a4dabeda532c094eea33787264de 561 Gene3D G3DSA:3.40.50.300 233 455 1.8E-50 T 14-10-2018 Amir_2267 7d59a4dabeda532c094eea33787264de 561 SMART SM00490 268 349 3.4E-33 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_2267 7d59a4dabeda532c094eea33787264de 561 Gene3D G3DSA:3.40.50.300 2 218 2.7E-78 T 14-10-2018 Amir_2267 7d59a4dabeda532c094eea33787264de 561 SUPERFAMILY SSF52540 82 370 5.57E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2267 7d59a4dabeda532c094eea33787264de 561 Gene3D G3DSA:3.30.70.330 483 557 8.8E-23 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Amir_2267 7d59a4dabeda532c094eea33787264de 561 Pfam PF00271 Helicase conserved C-terminal domain 241 349 1.1E-28 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_2267 7d59a4dabeda532c094eea33787264de 561 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 160 168 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Amir_6527 931d5bbbcfc57203e3c8a429fcccb5e7 417 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 321 414 2.5E-8 T 14-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF Amir_6527 931d5bbbcfc57203e3c8a429fcccb5e7 417 Pfam PF04024 PspC domain 19 70 1.5E-11 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal Amir_0118 95129731be3ddbf070567763a2ec67f6 416 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 413 38.833 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Amir_0118 95129731be3ddbf070567763a2ec67f6 416 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 219 391 4.8E-25 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_0118 95129731be3ddbf070567763a2ec67f6 416 SUPERFAMILY SSF46589 2 111 5.75E-26 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Amir_0118 95129731be3ddbf070567763a2ec67f6 416 Gene3D G3DSA:1.10.287.40 1 103 2.7E-21 T 14-10-2018 Amir_0118 95129731be3ddbf070567763a2ec67f6 416 PIRSF PIRSF001529 1 416 1.3E-139 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Amir_0118 95129731be3ddbf070567763a2ec67f6 416 SUPERFAMILY SSF55681 114 415 4.04E-87 T 14-10-2018 Amir_0118 95129731be3ddbf070567763a2ec67f6 416 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 106 1.2E-25 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Amir_0118 95129731be3ddbf070567763a2ec67f6 416 PRINTS PR00981 Seryl-tRNA synthetase signature 309 322 1.3E-30 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Amir_0118 95129731be3ddbf070567763a2ec67f6 416 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 1.3E-30 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Amir_0118 95129731be3ddbf070567763a2ec67f6 416 PRINTS PR00981 Seryl-tRNA synthetase signature 326 342 1.3E-30 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Amir_0118 95129731be3ddbf070567763a2ec67f6 416 PRINTS PR00981 Seryl-tRNA synthetase signature 257 269 1.3E-30 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Amir_0118 95129731be3ddbf070567763a2ec67f6 416 PRINTS PR00981 Seryl-tRNA synthetase signature 269 282 1.3E-30 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Amir_0118 95129731be3ddbf070567763a2ec67f6 416 Gene3D G3DSA:3.30.930.10 104 415 1.1E-116 T 14-10-2018 Amir_0118 95129731be3ddbf070567763a2ec67f6 416 TIGRFAM TIGR00414 serS: serine--tRNA ligase 2 408 5.8E-131 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 SUPERFAMILY SSF52777 1312 1555 4.11E-30 T 14-10-2018 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 SUPERFAMILY SSF56801 476 1041 4.19E-151 T 14-10-2018 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 SUPERFAMILY SSF56801 1570 2082 6.02E-141 T 14-10-2018 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Gene3D G3DSA:1.10.1200.10 1024 1095 3.2E-22 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 SUPERFAMILY SSF47336 2061 2134 1.44E-16 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 SUPERFAMILY SSF52777 244 485 2.67E-56 T 14-10-2018 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1596 1986 7.9E-121 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 540 946 1.1E-129 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Pfam PF00668 Condensation domain 1125 1545 1.8E-44 T 14-10-2018 IPR001242 Condensation domain Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Pfam PF00668 Condensation domain 44 158 6.9E-17 T 14-10-2018 IPR001242 Condensation domain Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Pfam PF00668 Condensation domain 186 497 2.0E-60 T 14-10-2018 IPR001242 Condensation domain Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Gene3D G3DSA:3.30.559.30 244 482 8.8E-129 T 14-10-2018 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2093 2108 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 SMART SM00823 Phosphopantetheine attachment site 1031 1099 0.0057 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 SMART SM00823 Phosphopantetheine attachment site 2069 2137 0.0042 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Gene3D G3DSA:3.30.300.30 1957 2055 8.3E-31 T 14-10-2018 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Gene3D G3DSA:1.10.1200.10 2056 2139 1.4E-23 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Gene3D G3DSA:3.40.50.1820 2148 2410 7.3E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Pfam PF00975 Thioesterase domain 2157 2395 1.7E-16 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Pfam PF00550 Phosphopantetheine attachment site 2072 2133 1.6E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Pfam PF00550 Phosphopantetheine attachment site 1033 1094 2.3E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Gene3D G3DSA:3.30.559.30 1318 1543 8.8E-30 T 14-10-2018 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 SUPERFAMILY SSF47336 1025 1093 1.4E-16 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 SUPERFAMILY SSF52777 1121 1325 5.67E-33 T 14-10-2018 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Pfam PF00501 AMP-binding enzyme 1573 1962 1.2E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Pfam PF00501 AMP-binding enzyme 521 922 2.0E-95 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Gene3D G3DSA:3.30.559.10 46 426 8.8E-129 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 SUPERFAMILY SSF53474 2146 2404 7.74E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1714 1725 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Gene3D G3DSA:3.30.559.10 1120 1317 1.3E-44 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Gene3D G3DSA:3.40.50.12780 1562 1956 3.0E-118 T 14-10-2018 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Gene3D G3DSA:3.40.50.12780 507 915 6.0E-132 T 14-10-2018 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1055 1070 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Gene3D G3DSA:3.30.300.30 916 1019 6.8E-32 T 14-10-2018 Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 ProSitePatterns PS00455 Putative AMP-binding domain signature. 658 669 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Pfam PF13193 AMP-binding enzyme C-terminal domain 1970 2041 1.0E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 Pfam PF13193 AMP-binding enzyme C-terminal domain 930 1003 1.5E-14 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3577 d2ffc298aa832a9182400b0b9fea67d7 2412 SUPERFAMILY SSF52777 47 240 3.67E-41 T 14-10-2018 Amir_6748 31ea824021d83184aa4203899dce3feb 339 SUPERFAMILY SSF53067 132 309 2.37E-34 T 14-10-2018 Amir_6748 31ea824021d83184aa4203899dce3feb 339 Gene3D G3DSA:3.30.420.40 8 303 1.7E-74 T 14-10-2018 Amir_6748 31ea824021d83184aa4203899dce3feb 339 SUPERFAMILY SSF53067 5 128 8.63E-29 T 14-10-2018 Amir_6748 31ea824021d83184aa4203899dce3feb 339 Pfam PF02541 Ppx/GppA phosphatase family 20 308 8.8E-72 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Amir_6748 31ea824021d83184aa4203899dce3feb 339 Gene3D G3DSA:3.30.420.150 111 296 1.7E-74 T 14-10-2018 Amir_1565 1e14f016fb0bd5154caef8570dbc5e53 142 SUPERFAMILY SSF51316 13 139 6.8E-52 T 14-10-2018 IPR011057 Mss4-like superfamily Amir_1565 1e14f016fb0bd5154caef8570dbc5e53 142 Gene3D G3DSA:2.170.150.20 2 141 6.3E-55 T 14-10-2018 Amir_1565 1e14f016fb0bd5154caef8570dbc5e53 142 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 14 139 4.3E-46 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Amir_1565 1e14f016fb0bd5154caef8570dbc5e53 142 Pfam PF01641 SelR domain 17 136 3.5E-50 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Amir_0807 a945db2cc915fb27e19fb6e8624a012c 420 Gene3D G3DSA:3.40.190.10 54 369 2.1E-72 T 14-10-2018 Amir_0807 a945db2cc915fb27e19fb6e8624a012c 420 SUPERFAMILY SSF53850 44 407 4.53E-68 T 14-10-2018 Amir_0807 a945db2cc915fb27e19fb6e8624a012c 420 Gene3D G3DSA:3.40.190.10 148 390 2.1E-72 T 14-10-2018 Amir_0807 a945db2cc915fb27e19fb6e8624a012c 420 Pfam PF01547 Bacterial extracellular solute-binding protein 45 332 3.7E-30 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.30.70.3290 3619 4057 9.2E-150 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF47336 5091 5204 2.22E-21 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF51735 760 930 1.45E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00826 2001 2192 2.1E-69 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00826 4074 4235 1.9E-78 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 ProSitePatterns PS00012 Phosphopantetheine attachment site. 5123 5138 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF51735 4819 5033 9.67E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF53901 1104 1480 2.16E-102 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.40.50.12780 5 411 9.5E-116 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF51735 4612 4739 6.78E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF14765 Polyketide synthase dehydratase 2001 2310 4.8E-53 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF14765 Polyketide synthase dehydratase 4074 4345 3.1E-53 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF00698 Acyl transferase domain 3707 4027 8.9E-77 T 14-10-2018 IPR014043 Acyl transferase Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF00698 Acyl transferase domain 1637 1953 2.2E-82 T 14-10-2018 IPR014043 Acyl transferase Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF00698 Acyl transferase domain 5721 6034 7.2E-78 T 14-10-2018 IPR014043 Acyl transferase Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:1.10.1200.10 5078 5171 9.8E-34 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:1.10.1200.10 3039 3131 1.9E-33 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:1.10.1200.10 6588 6676 3.3E-32 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF00501 AMP-binding enzyme 17 418 8.0E-103 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF51735 2253 2453 1.14E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF50129 2470 2605 1.4E-24 T 14-10-2018 IPR011032 GroES-like superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF13602 Zinc-binding dehydrogenase 4684 4811 3.3E-18 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF13602 Zinc-binding dehydrogenase 2658 2765 8.4E-16 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00823 Phosphopantetheine attachment site 6606 6675 1.0E-26 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00823 Phosphopantetheine attachment site 3057 3129 1.1E-29 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00823 Phosphopantetheine attachment site 5096 5168 6.0E-31 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00823 Phosphopantetheine attachment site 1012 1084 1.4E-28 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.30.70.3290 5637 6063 3.5E-156 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF52151 1636 1922 1.26E-68 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3412 3529 2.2E-42 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 5447 5564 5.3E-44 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1364 1479 1.5E-44 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00825 Beta-ketoacyl synthase 3156 3582 9.4E-215 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00825 Beta-ketoacyl synthase 1109 1532 9.2E-213 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00825 Beta-ketoacyl synthase 5191 5617 8.6E-218 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF47336 3053 3168 2.88E-22 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF55048 3833 3894 1.14E-9 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF51735 2568 2742 1.24E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.40.47.10 1098 1542 1.4E-182 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.40.47.10 3146 3599 3.8E-186 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.40.47.10 5180 5629 1.3E-185 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.30.70.3290 1553 1982 1.3E-157 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF52151 5719 6007 6.28E-67 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 2489 2543 2.0E-4 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF52151 3705 3998 2.38E-63 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM01294 5097 5164 3.0E-4 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM01294 6606 6671 1.5E-4 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM01294 1013 1080 5.3E-7 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM01294 3058 3125 1.4E-4 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF51735 6323 6582 1.73E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF51735 4358 4497 1.42E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.40.50.720 525 988 1.1E-64 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.40.366.10 1637 1938 1.3E-157 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.40.366.10 5721 6018 3.5E-156 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.40.366.10 3707 4012 9.2E-150 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 ProSitePatterns PS00012 Phosphopantetheine attachment site. 6630 6645 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5723 6015 1.7E-111 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 3709 4009 7.5E-104 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1639 1935 7.5E-114 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1482 1601 7.2E-14 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 5567 5658 4.4E-11 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3532 3670 3.0E-14 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 4641 4662 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF51735 6120 6316 7.09E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF51735 2773 2993 2.7E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF56801 8 512 3.14E-146 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF08659 KR domain 762 922 1.5E-17 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF08659 KR domain 4821 4999 8.1E-58 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF08659 KR domain 6327 6503 8.9E-51 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF08659 KR domain 2775 2954 1.8E-56 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF53901 5185 5555 3.24E-101 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.40.50.720 2585 2714 3.3E-94 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF50129 4513 4650 1.37E-23 T 14-10-2018 IPR011032 GroES-like superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.90.180.10 4501 4814 3.4E-113 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1107 1356 2.6E-85 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5189 5439 6.8E-88 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3154 3404 1.4E-86 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF51735 524 748 1.97E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.40.50.720 6073 6577 1.0E-139 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF55048 5846 5907 1.14E-9 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.90.180.10 2479 2765 3.3E-94 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF13193 AMP-binding enzyme C-terminal domain 427 501 1.4E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6327 6505 3.9E-45 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4821 5001 1.3E-55 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 762 926 1.9E-10 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2775 2955 1.7E-53 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.40.50.720 2768 3025 2.0E-66 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.40.50.720 4815 5065 8.0E-64 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.10.129.110 1990 2313 3.3E-98 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.10.129.110 4063 4350 7.2E-109 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF47336 1008 1090 2.88E-18 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.30.300.30 412 511 5.4E-25 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00829 4516 4811 8.2E-152 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SMART SM00829 2471 2765 7.5E-155 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1269 1285 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 5352 5368 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF53901 3150 3526 1.2E-99 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:1.10.1200.10 992 1085 3.0E-27 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Gene3D G3DSA:3.40.50.720 2314 2478 2.0E-23 T 14-10-2018 Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF47336 6597 6682 9.81E-21 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3084 3099 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 SUPERFAMILY SSF55048 1760 1825 9.81E-13 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF00550 Phosphopantetheine attachment site 3060 3125 5.3E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF00550 Phosphopantetheine attachment site 1014 1080 1.5E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF00550 Phosphopantetheine attachment site 5098 5164 1.1E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3294 256a194c65648f4f6bd928ff7d8aab07 6768 Pfam PF00550 Phosphopantetheine attachment site 6609 6671 1.5E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_5919 1245329cc0cfc402d672153b0fc7827f 258 Hamap MF_00052_B Ribonuclease HII [rnhB]. 30 211 34.142 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 Amir_5919 1245329cc0cfc402d672153b0fc7827f 258 SUPERFAMILY SSF53098 23 215 5.92E-58 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_5919 1245329cc0cfc402d672153b0fc7827f 258 Gene3D G3DSA:3.30.420.10 12 221 4.5E-62 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amir_5919 1245329cc0cfc402d672153b0fc7827f 258 Pfam PF01351 Ribonuclease HII 32 211 2.0E-35 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain Amir_0306 0ca62b0a0bfc7d3ec768faa2eec943ff 555 Pfam PF07690 Major Facilitator Superfamily 30 429 8.0E-51 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_0306 0ca62b0a0bfc7d3ec768faa2eec943ff 555 PRINTS PR01035 Tetracycline resistance protein signature 150 172 3.4E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_0306 0ca62b0a0bfc7d3ec768faa2eec943ff 555 PRINTS PR01035 Tetracycline resistance protein signature 120 141 3.4E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_0306 0ca62b0a0bfc7d3ec768faa2eec943ff 555 PRINTS PR01035 Tetracycline resistance protein signature 27 43 3.4E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_0306 0ca62b0a0bfc7d3ec768faa2eec943ff 555 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 26 528 1.0E-77 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Amir_0306 0ca62b0a0bfc7d3ec768faa2eec943ff 555 SUPERFAMILY SSF103473 12 529 2.09E-65 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_0306 0ca62b0a0bfc7d3ec768faa2eec943ff 555 Gene3D G3DSA:1.20.1720.10 26 235 1.1E-49 T 14-10-2018 Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 Gene3D G3DSA:2.40.30.10 706 824 5.5E-39 T 14-10-2018 Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 SUPERFAMILY SSF52540 530 696 8.33E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 Gene3D G3DSA:1.10.10.2480 3 64 5.9E-13 T 14-10-2018 Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 SUPERFAMILY SSF50447 935 1033 2.16E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 PRINTS PR00315 GTP-binding elongation factor signature 533 546 2.5E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 PRINTS PR00315 GTP-binding elongation factor signature 637 646 2.5E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 PRINTS PR00315 GTP-binding elongation factor signature 585 595 2.5E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 PRINTS PR00315 GTP-binding elongation factor signature 601 612 2.5E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 SUPERFAMILY SSF50447 708 790 2.55E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 Gene3D G3DSA:2.40.30.10 936 1034 1.0E-29 T 14-10-2018 Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 441 1033 8.7E-228 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 SUPERFAMILY SSF52156 814 941 7.98E-35 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 Gene3D G3DSA:3.40.50.10050 828 935 1.2E-33 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 Gene3D G3DSA:3.40.50.300 527 705 1.4E-66 T 14-10-2018 Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 450 494 1.0E-5 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 4 50 6.0E-13 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 Pfam PF00009 Elongation factor Tu GTP binding domain 534 694 6.1E-33 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 ProSitePatterns PS01176 Initiation factor 2 signature. 986 1008 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 1033 16.89 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 Pfam PF11987 Translation-initiation factor 2 822 924 1.0E-31 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Amir_5834 2b091ec0ca2271f8dbc4b7478e64a789 1034 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 532 691 9.8E-33 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amir_4234 c2aeade3ce0022bd6ac2a7a33eaacb3a 298 Pfam PF04072 Leucine carboxyl methyltransferase 16 194 5.0E-49 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 Amir_4234 c2aeade3ce0022bd6ac2a7a33eaacb3a 298 Gene3D G3DSA:3.40.50.150 3 293 1.4E-73 T 14-10-2018 Amir_4234 c2aeade3ce0022bd6ac2a7a33eaacb3a 298 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 14 273 3.3E-71 T 14-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 Amir_4234 c2aeade3ce0022bd6ac2a7a33eaacb3a 298 SUPERFAMILY SSF53335 12 293 1.33E-66 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_2862 4db105fa977fbefa7b2d438a2dc761d8 492 Gene3D G3DSA:3.40.50.2300 158 462 1.7E-19 T 14-10-2018 Amir_2862 4db105fa977fbefa7b2d438a2dc761d8 492 SUPERFAMILY SSF53822 159 484 6.0E-20 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_2862 4db105fa977fbefa7b2d438a2dc761d8 492 Gene3D G3DSA:3.40.50.2300 217 370 1.7E-19 T 14-10-2018 Amir_3619 a40fdfb94990300c357236d4bd47cc37 328 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 14 309 2.5E-58 T 14-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal Amir_3619 a40fdfb94990300c357236d4bd47cc37 328 SUPERFAMILY SSF55729 125 303 6.36E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_4297 3630440d60982c5619599e3996102604 368 SUPERFAMILY SSF50494 195 362 1.87E-24 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_4297 3630440d60982c5619599e3996102604 368 Gene3D G3DSA:3.30.300.50 122 188 2.1E-5 T 14-10-2018 IPR035070 Streptogrisin prodomain Amir_4297 3630440d60982c5619599e3996102604 368 Gene3D G3DSA:3.30.300.50 41 121 1.5E-10 T 14-10-2018 IPR035070 Streptogrisin prodomain Amir_4297 3630440d60982c5619599e3996102604 368 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 217 222 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 Amir_4297 3630440d60982c5619599e3996102604 368 PIRSF PIRSF001134 1 368 1.3E-91 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_4297 3630440d60982c5619599e3996102604 368 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 292 309 9.4E-28 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_4297 3630440d60982c5619599e3996102604 368 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 311 334 9.4E-28 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_4297 3630440d60982c5619599e3996102604 368 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 271 291 9.4E-28 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_4297 3630440d60982c5619599e3996102604 368 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 336 350 9.4E-28 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_4297 3630440d60982c5619599e3996102604 368 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 215 229 9.4E-28 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_4297 3630440d60982c5619599e3996102604 368 Pfam PF02983 Alpha-lytic protease prodomain 124 175 8.8E-15 T 14-10-2018 IPR004236 Peptidase S1A, alpha-lytic prodomain GO:0005576|GO:0006508|GO:0008236 Amir_4297 3630440d60982c5619599e3996102604 368 Gene3D G3DSA:2.40.10.10 269 359 1.7E-29 T 14-10-2018 Amir_4297 3630440d60982c5619599e3996102604 368 Gene3D G3DSA:2.40.10.10 193 268 6.9E-19 T 14-10-2018 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 PIRSF PIRSF001100 2 339 4.2E-84 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 PIRSF PIRSF001100 341 465 1.3 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 PRINTS PR00733 Glycosyl hydrolase family 6 signature 278 298 2.0E-45 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 PRINTS PR00733 Glycosyl hydrolase family 6 signature 302 316 2.0E-45 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 PRINTS PR00733 Glycosyl hydrolase family 6 signature 231 241 2.0E-45 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 PRINTS PR00733 Glycosyl hydrolase family 6 signature 72 91 2.0E-45 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 PRINTS PR00733 Glycosyl hydrolase family 6 signature 143 158 2.0E-45 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 PRINTS PR00733 Glycosyl hydrolase family 6 signature 200 213 2.0E-45 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 PRINTS PR00733 Glycosyl hydrolase family 6 signature 115 128 2.0E-45 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 PRINTS PR00733 Glycosyl hydrolase family 6 signature 263 276 2.0E-45 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 SMART SM00637 366 464 2.8E-23 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 Gene3D G3DSA:3.20.20.40 50 336 7.5E-108 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 Pfam PF01341 Glycosyl hydrolases family 6 61 317 1.8E-67 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 Pfam PF00553 Cellulose binding domain 366 464 2.2E-20 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 ProSitePatterns PS00655 Glycosyl hydrolases family 6 signature 1. 120 136 - T 14-10-2018 IPR001524 Glycoside hydrolase, family 6, conserved site GO:0004553|GO:0005975 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 Gene3D G3DSA:2.60.40.290 361 465 1.9E-23 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 SUPERFAMILY SSF49384 360 464 6.0E-22 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_2166 e1185949c857a81b24bbbffe6d61aa85 465 SUPERFAMILY SSF51989 52 335 2.62E-88 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 Amir_1911 321baa684b7fbf410a488e9132736995 141 SMART SM00116 47 95 7.9E-7 T 14-10-2018 IPR000644 CBS domain Amir_1911 321baa684b7fbf410a488e9132736995 141 Pfam PF00571 CBS domain 40 94 9.6E-12 T 14-10-2018 IPR000644 CBS domain Amir_1911 321baa684b7fbf410a488e9132736995 141 Pfam PF00571 CBS domain 2 27 1.7E-4 T 14-10-2018 IPR000644 CBS domain Amir_1911 321baa684b7fbf410a488e9132736995 141 SUPERFAMILY SSF54631 2 94 1.77E-23 T 14-10-2018 Amir_1911 321baa684b7fbf410a488e9132736995 141 Gene3D G3DSA:3.10.580.10 1 121 8.6E-25 T 14-10-2018 Amir_3139 63cdf3066bc9a172e8079be178699f33 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 243 6.9E-57 T 14-10-2018 Amir_3139 63cdf3066bc9a172e8079be178699f33 244 SUPERFAMILY SSF51735 5 243 7.83E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3139 63cdf3066bc9a172e8079be178699f33 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.9E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3139 63cdf3066bc9a172e8079be178699f33 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.9E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3139 63cdf3066bc9a172e8079be178699f33 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.9E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3139 63cdf3066bc9a172e8079be178699f33 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.9E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3139 63cdf3066bc9a172e8079be178699f33 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.9E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3139 63cdf3066bc9a172e8079be178699f33 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.9E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3139 63cdf3066bc9a172e8079be178699f33 244 Gene3D G3DSA:3.40.50.720 2 243 9.4E-71 T 14-10-2018 Amir_3139 63cdf3066bc9a172e8079be178699f33 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 9.3E-6 T 14-10-2018 Amir_3139 63cdf3066bc9a172e8079be178699f33 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3139 63cdf3066bc9a172e8079be178699f33 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2599 4170f43a643310d73c6bfb707a5957ca 133 SMART SM00345 20 79 4.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2599 4170f43a643310d73c6bfb707a5957ca 133 Gene3D G3DSA:1.10.10.10 14 126 9.4E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2599 4170f43a643310d73c6bfb707a5957ca 133 SUPERFAMILY SSF46785 9 83 1.39E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2599 4170f43a643310d73c6bfb707a5957ca 133 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 79 7.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5166 3f4137c8ef059132928cd892c2fb24e6 373 Pfam PF06013 Proteins of 100 residues with WXG 104 181 1.7E-6 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like Amir_5166 3f4137c8ef059132928cd892c2fb24e6 373 Gene3D G3DSA:1.10.287.1060 101 178 2.5E-5 T 14-10-2018 Amir_5166 3f4137c8ef059132928cd892c2fb24e6 373 SUPERFAMILY SSF140453 104 185 1.83E-7 T 14-10-2018 IPR036689 ESAT-6-like superfamily Amir_1123 932ea6c6d534d4b103252879814080b6 275 Pfam PF01061 ABC-2 type transporter 23 238 2.2E-36 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Amir_1123 932ea6c6d534d4b103252879814080b6 275 PIRSF PIRSF006648 1 274 2.5E-62 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_1123 932ea6c6d534d4b103252879814080b6 275 PRINTS PR00164 ABC-2 type transport system membrane protein signature 43 64 3.2E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_1123 932ea6c6d534d4b103252879814080b6 275 PRINTS PR00164 ABC-2 type transport system membrane protein signature 217 236 3.2E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_1123 932ea6c6d534d4b103252879814080b6 275 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 3.2E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_0438 f5565a9424ae84cf3910aec7d67a0598 401 SUPERFAMILY SSF63867 327 401 6.54E-17 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0438 f5565a9424ae84cf3910aec7d67a0598 401 SMART SM00852 182 318 1.9E-39 T 14-10-2018 IPR001453 MoaB/Mog domain Amir_0438 f5565a9424ae84cf3910aec7d67a0598 401 Pfam PF03454 MoeA C-terminal region (domain IV) 332 401 2.2E-17 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0438 f5565a9424ae84cf3910aec7d67a0598 401 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 179 314 4.4E-31 T 14-10-2018 IPR001453 MoaB/Mog domain Amir_0438 f5565a9424ae84cf3910aec7d67a0598 401 Gene3D G3DSA:3.90.105.10 29 176 7.6E-124 T 14-10-2018 Amir_0438 f5565a9424ae84cf3910aec7d67a0598 401 Pfam PF00994 Probable molybdopterin binding domain 183 317 6.2E-23 T 14-10-2018 IPR001453 MoaB/Mog domain Amir_0438 f5565a9424ae84cf3910aec7d67a0598 401 Gene3D G3DSA:2.40.340.10 329 396 7.6E-124 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0438 f5565a9424ae84cf3910aec7d67a0598 401 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 169 2.1E-41 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0438 f5565a9424ae84cf3910aec7d67a0598 401 SUPERFAMILY SSF53218 179 324 1.96E-38 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amir_0438 f5565a9424ae84cf3910aec7d67a0598 401 Gene3D G3DSA:3.40.980.10 177 328 7.6E-124 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amir_0438 f5565a9424ae84cf3910aec7d67a0598 401 Gene3D G3DSA:2.170.190.11 51 143 7.6E-124 T 14-10-2018 Amir_0438 f5565a9424ae84cf3910aec7d67a0598 401 SUPERFAMILY SSF63882 9 178 9.16E-47 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_5843 79e39792b159de72bdcdc76e66c933c9 135 SUPERFAMILY SSF111038 3 131 3.01E-29 T 14-10-2018 IPR035917 YjbQ-like superfamily Amir_5843 79e39792b159de72bdcdc76e66c933c9 135 Pfam PF01894 Uncharacterised protein family UPF0047 18 130 3.9E-21 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Amir_5843 79e39792b159de72bdcdc76e66c933c9 135 Gene3D G3DSA:2.60.120.460 2 134 5.2E-27 T 14-10-2018 IPR035917 YjbQ-like superfamily Amir_6611 81dc3c8f97b940f19246f8d02b393fc7 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.5E-32 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6611 81dc3c8f97b940f19246f8d02b393fc7 277 Gene3D G3DSA:4.10.950.10 197 272 1.0E-29 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6611 81dc3c8f97b940f19246f8d02b393fc7 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 4.5E-125 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Amir_6611 81dc3c8f97b940f19246f8d02b393fc7 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.121 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Amir_6611 81dc3c8f97b940f19246f8d02b393fc7 277 SUPERFAMILY SSF50104 127 269 2.35E-55 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Amir_6611 81dc3c8f97b940f19246f8d02b393fc7 277 Gene3D G3DSA:2.40.50.140 1 115 2.9E-46 T 14-10-2018 Amir_6611 81dc3c8f97b940f19246f8d02b393fc7 277 PIRSF PIRSF002158 4 274 6.1E-94 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6611 81dc3c8f97b940f19246f8d02b393fc7 277 Gene3D G3DSA:2.30.30.30 119 196 1.7E-32 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Amir_6611 81dc3c8f97b940f19246f8d02b393fc7 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 1.3E-54 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Amir_6611 81dc3c8f97b940f19246f8d02b393fc7 277 SMART SM01382 125 253 4.0E-88 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Amir_6611 81dc3c8f97b940f19246f8d02b393fc7 277 SUPERFAMILY SSF50249 3 126 1.17E-48 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_6611 81dc3c8f97b940f19246f8d02b393fc7 277 SMART SM01383 42 119 1.8E-40 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6611 81dc3c8f97b940f19246f8d02b393fc7 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_4506 8f896e38f86f773a00884bb8da54307e 622 Pfam PF00501 AMP-binding enzyme 18 398 2.0E-67 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4506 8f896e38f86f773a00884bb8da54307e 622 ProSitePatterns PS00455 Putative AMP-binding domain signature. 145 156 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4506 8f896e38f86f773a00884bb8da54307e 622 SUPERFAMILY SSF56801 8 491 4.19E-112 T 14-10-2018 Amir_4506 8f896e38f86f773a00884bb8da54307e 622 Gene3D G3DSA:3.40.50.12780 12 390 6.1E-88 T 14-10-2018 Amir_4506 8f896e38f86f773a00884bb8da54307e 622 ProSitePatterns PS00012 Phosphopantetheine attachment site. 577 592 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4506 8f896e38f86f773a00884bb8da54307e 622 Pfam PF00550 Phosphopantetheine attachment site 561 618 3.9E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4506 8f896e38f86f773a00884bb8da54307e 622 SUPERFAMILY SSF47336 553 620 7.72E-14 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4506 8f896e38f86f773a00884bb8da54307e 622 Gene3D G3DSA:1.10.1200.10 547 622 8.2E-18 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4506 8f896e38f86f773a00884bb8da54307e 622 SMART SM00823 Phosphopantetheine attachment site 554 622 3.3E-11 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4506 8f896e38f86f773a00884bb8da54307e 622 Pfam PF13193 AMP-binding enzyme C-terminal domain 406 479 6.7E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_4506 8f896e38f86f773a00884bb8da54307e 622 Gene3D G3DSA:3.30.300.30 392 498 1.4E-24 T 14-10-2018 Amir_3136 132b343ce9663c84ba6de8852f7bdfc3 121 SUPERFAMILY SSF142906 25 113 4.58E-9 T 14-10-2018 IPR038056 YjbR-like superfamily Amir_3136 132b343ce9663c84ba6de8852f7bdfc3 121 Pfam PF04237 YjbR 25 100 2.3E-10 T 14-10-2018 IPR007351 Uncharacterised protein YjbR Amir_7087 3f610e058840406f63add06668f0e4c3 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 105 9.0E-39 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Amir_7087 3f610e058840406f63add06668f0e4c3 108 Pfam PF00085 Thioredoxin 5 105 2.7E-33 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 Amir_7087 3f610e058840406f63add06668f0e4c3 108 SUPERFAMILY SSF52833 4 108 5.74E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_7087 3f610e058840406f63add06668f0e4c3 108 PIRSF PIRSF000077 2 108 1.2E-42 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Amir_7087 3f610e058840406f63add06668f0e4c3 108 PRINTS PR00421 Thioredoxin family signature 72 83 2.9E-8 T 14-10-2018 Amir_7087 3f610e058840406f63add06668f0e4c3 108 PRINTS PR00421 Thioredoxin family signature 24 32 2.9E-8 T 14-10-2018 Amir_7087 3f610e058840406f63add06668f0e4c3 108 PRINTS PR00421 Thioredoxin family signature 32 41 2.9E-8 T 14-10-2018 Amir_7087 3f610e058840406f63add06668f0e4c3 108 Gene3D G3DSA:3.40.30.10 2 107 5.3E-37 T 14-10-2018 Amir_7087 3f610e058840406f63add06668f0e4c3 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Amir_4323 40dcaa9c260ecf11dc48a3d168f45b5e 547 Pfam PF00005 ABC transporter 36 192 1.1E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4323 40dcaa9c260ecf11dc48a3d168f45b5e 547 ProSitePatterns PS00211 ABC transporters family signature. 430 444 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_4323 40dcaa9c260ecf11dc48a3d168f45b5e 547 SUPERFAMILY SSF52540 283 535 2.31E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4323 40dcaa9c260ecf11dc48a3d168f45b5e 547 SUPERFAMILY SSF52540 19 263 1.05E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4323 40dcaa9c260ecf11dc48a3d168f45b5e 547 Gene3D G3DSA:3.40.50.300 291 545 3.3E-80 T 14-10-2018 Amir_4323 40dcaa9c260ecf11dc48a3d168f45b5e 547 Gene3D G3DSA:3.40.50.300 17 290 8.4E-75 T 14-10-2018 Amir_4323 40dcaa9c260ecf11dc48a3d168f45b5e 547 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_4323 40dcaa9c260ecf11dc48a3d168f45b5e 547 Pfam PF00005 ABC transporter 307 458 2.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4323 40dcaa9c260ecf11dc48a3d168f45b5e 547 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 280 0.014 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_4323 40dcaa9c260ecf11dc48a3d168f45b5e 547 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 509 540 4.1E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_4323 40dcaa9c260ecf11dc48a3d168f45b5e 547 SMART SM00382 44 241 1.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4323 40dcaa9c260ecf11dc48a3d168f45b5e 547 SMART SM00382 315 507 4.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3711 f6a8a1fa2d9b1c171719140b8a7a2aed 207 SUPERFAMILY SSF48498 80 202 4.89E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3711 f6a8a1fa2d9b1c171719140b8a7a2aed 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 3.7E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3711 f6a8a1fa2d9b1c171719140b8a7a2aed 207 Gene3D G3DSA:1.10.357.10 2 204 1.6E-44 T 14-10-2018 Amir_3711 f6a8a1fa2d9b1c171719140b8a7a2aed 207 SUPERFAMILY SSF46689 4 74 1.13E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3711 f6a8a1fa2d9b1c171719140b8a7a2aed 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 6.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3711 f6a8a1fa2d9b1c171719140b8a7a2aed 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 6.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5859 239c9772da47d19ee95d1f302e08ad1f 465 Gene3D G3DSA:3.40.50.300 41 187 1.3E-21 T 14-10-2018 Amir_5859 239c9772da47d19ee95d1f302e08ad1f 465 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 4 455 1.3E-116 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Amir_5859 239c9772da47d19ee95d1f302e08ad1f 465 SUPERFAMILY SSF52317 259 454 1.16E-29 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_5859 239c9772da47d19ee95d1f302e08ad1f 465 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 262 442 1.9E-25 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Amir_5859 239c9772da47d19ee95d1f302e08ad1f 465 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 1 447 42.148 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Amir_5859 239c9772da47d19ee95d1f302e08ad1f 465 Gene3D G3DSA:3.40.50.880 260 421 4.2E-9 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_5859 239c9772da47d19ee95d1f302e08ad1f 465 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 189 8.1E-19 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Amir_5859 239c9772da47d19ee95d1f302e08ad1f 465 SUPERFAMILY SSF52540 3 196 2.09E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5859 239c9772da47d19ee95d1f302e08ad1f 465 Gene3D G3DSA:3.40.50.300 3 40 1.4E-5 T 14-10-2018 Amir_5490 cab9c76dd008ff0a64d64e042f7d7673 377 Gene3D G3DSA:3.40.640.10 55 271 1.3E-130 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_5490 cab9c76dd008ff0a64d64e042f7d7673 377 Gene3D G3DSA:3.90.1150.10 11 377 1.3E-130 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_5490 cab9c76dd008ff0a64d64e042f7d7673 377 SUPERFAMILY SSF53383 4 377 3.71E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_5490 cab9c76dd008ff0a64d64e042f7d7673 377 Pfam PF00155 Aminotransferase class I and II 43 373 9.5E-37 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_1855 6891fe1eed33cc3f8da0f8a0bcc053f9 326 Gene3D G3DSA:3.40.50.2300 144 281 6.3E-97 T 14-10-2018 Amir_1855 6891fe1eed33cc3f8da0f8a0bcc053f9 326 Pfam PF13407 Periplasmic binding protein domain 47 300 1.8E-44 T 14-10-2018 IPR025997 Periplasmic binding protein Amir_1855 6891fe1eed33cc3f8da0f8a0bcc053f9 326 Gene3D G3DSA:3.40.50.2300 43 298 6.3E-97 T 14-10-2018 Amir_1855 6891fe1eed33cc3f8da0f8a0bcc053f9 326 SUPERFAMILY SSF53822 38 317 3.3E-70 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_3800 8953652aeccfac3d6d0d7df50c31f3f3 583 Pfam PF02779 Transketolase, pyrimidine binding domain 276 434 4.4E-33 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amir_3800 8953652aeccfac3d6d0d7df50c31f3f3 583 SUPERFAMILY SSF52518 18 338 1.48E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_3800 8953652aeccfac3d6d0d7df50c31f3f3 583 ProSitePatterns PS00802 Transketolase signature 2. 382 398 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_3800 8953652aeccfac3d6d0d7df50c31f3f3 583 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 18 204 3.4E-78 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_3800 8953652aeccfac3d6d0d7df50c31f3f3 583 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 205 247 1.3E-9 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_3800 8953652aeccfac3d6d0d7df50c31f3f3 583 Gene3D G3DSA:3.40.50.970 15 256 2.6E-77 T 14-10-2018 Amir_3800 8953652aeccfac3d6d0d7df50c31f3f3 583 Pfam PF02780 Transketolase, C-terminal domain 456 570 1.4E-20 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Amir_3800 8953652aeccfac3d6d0d7df50c31f3f3 583 SUPERFAMILY SSF52922 448 578 3.4E-20 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_3800 8953652aeccfac3d6d0d7df50c31f3f3 583 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 579 35.532 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_3800 8953652aeccfac3d6d0d7df50c31f3f3 583 Gene3D G3DSA:3.40.50.920 451 580 9.2E-26 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_3800 8953652aeccfac3d6d0d7df50c31f3f3 583 SMART SM00861 276 439 2.9E-50 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amir_3800 8953652aeccfac3d6d0d7df50c31f3f3 583 Gene3D G3DSA:3.40.50.970 275 443 1.2E-58 T 14-10-2018 Amir_3800 8953652aeccfac3d6d0d7df50c31f3f3 583 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_3800 8953652aeccfac3d6d0d7df50c31f3f3 583 SUPERFAMILY SSF52518 320 423 5.33E-5 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_1152 0295182d428afa5ce272176808cd570a 450 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 258 418 7.2E-33 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Amir_1152 0295182d428afa5ce272176808cd570a 450 TIGRFAM TIGR00115 tig: trigger factor 12 417 3.0E-115 T 14-10-2018 IPR005215 Trigger factor GO:0015031 Amir_1152 0295182d428afa5ce272176808cd570a 450 Gene3D G3DSA:3.10.50.40 151 243 1.0E-63 T 14-10-2018 Amir_1152 0295182d428afa5ce272176808cd570a 450 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 215 8.8E-6 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Amir_1152 0295182d428afa5ce272176808cd570a 450 PIRSF PIRSF003095 1 445 8.9E-112 T 14-10-2018 IPR005215 Trigger factor GO:0015031 Amir_1152 0295182d428afa5ce272176808cd570a 450 Gene3D G3DSA:1.10.3120.10 117 423 1.0E-63 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Amir_1152 0295182d428afa5ce272176808cd570a 450 Hamap MF_00303 Trigger factor [tig]. 1 424 18.817 T 14-10-2018 IPR005215 Trigger factor GO:0015031 Amir_1152 0295182d428afa5ce272176808cd570a 450 SUPERFAMILY SSF109998 245 434 8.04E-41 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily Amir_1152 0295182d428afa5ce272176808cd570a 450 Pfam PF05697 Bacterial trigger factor protein (TF) 2 145 1.9E-38 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Amir_1152 0295182d428afa5ce272176808cd570a 450 SUPERFAMILY SSF102735 1 128 1.83E-33 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Amir_1152 0295182d428afa5ce272176808cd570a 450 Gene3D G3DSA:3.30.70.1050 1 116 3.4E-32 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Amir_1152 0295182d428afa5ce272176808cd570a 450 SUPERFAMILY SSF54534 133 244 2.95E-21 T 14-10-2018 Amir_4869 3e96da75038122c82539cb8d15b3180f 2290 Gene3D G3DSA:2.170.16.10 2017 2161 2.6E-33 T 14-10-2018 Amir_4869 3e96da75038122c82539cb8d15b3180f 2290 Pfam PF07591 Pretoxin HINT domain 2029 2161 1.2E-14 T 14-10-2018 Amir_4869 3e96da75038122c82539cb8d15b3180f 2290 SUPERFAMILY SSF51294 2019 2162 2.55E-22 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amir_4869 3e96da75038122c82539cb8d15b3180f 2290 Pfam PF05593 RHS Repeat 1260 1295 4.7E-8 T 14-10-2018 IPR031325 RHS repeat Amir_4869 3e96da75038122c82539cb8d15b3180f 2290 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1755 1833 7.6E-16 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 Amir_4869 3e96da75038122c82539cb8d15b3180f 2290 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 2136 2162 7.3E-5 T 14-10-2018 IPR030934 Intein C-terminal splicing region Amir_4869 3e96da75038122c82539cb8d15b3180f 2290 Gene3D G3DSA:2.180.10.10 1224 1833 6.9E-42 T 14-10-2018 Amir_4869 3e96da75038122c82539cb8d15b3180f 2290 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1260 1298 9.6E-8 T 14-10-2018 IPR006530 YD repeat Amir_4869 3e96da75038122c82539cb8d15b3180f 2290 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1306 1332 4.4E-4 T 14-10-2018 IPR006530 YD repeat Amir_4869 3e96da75038122c82539cb8d15b3180f 2290 SMART SM00306 2017 2119 7.8E-8 T 14-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amir_2469 3249945550bf3aa44eab36c56fab9872 224 Gene3D G3DSA:1.10.10.10 1 74 2.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2469 3249945550bf3aa44eab36c56fab9872 224 SMART SM00345 15 73 6.0E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2469 3249945550bf3aa44eab36c56fab9872 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 65 7.0E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2469 3249945550bf3aa44eab36c56fab9872 224 Gene3D G3DSA:1.20.120.530 77 213 4.5E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_2469 3249945550bf3aa44eab36c56fab9872 224 Pfam PF07729 FCD domain 83 208 5.7E-24 T 14-10-2018 IPR011711 GntR, C-terminal Amir_2469 3249945550bf3aa44eab36c56fab9872 224 SUPERFAMILY SSF46785 7 99 4.98E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2469 3249945550bf3aa44eab36c56fab9872 224 SUPERFAMILY SSF48008 79 211 2.09E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_2469 3249945550bf3aa44eab36c56fab9872 224 SMART SM00895 83 209 1.1E-18 T 14-10-2018 IPR011711 GntR, C-terminal Amir_3538 288a1512903fbd7353d1632ee874b779 328 Gene3D G3DSA:3.40.190.10 162 250 1.2E-41 T 14-10-2018 Amir_3538 288a1512903fbd7353d1632ee874b779 328 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 68 275 9.2E-33 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_3538 288a1512903fbd7353d1632ee874b779 328 SUPERFAMILY SSF53850 64 275 1.48E-31 T 14-10-2018 Amir_3538 288a1512903fbd7353d1632ee874b779 328 Gene3D G3DSA:3.40.190.10 63 274 1.2E-41 T 14-10-2018 Amir_3538 288a1512903fbd7353d1632ee874b779 328 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 91 104 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site Amir_3538 288a1512903fbd7353d1632ee874b779 328 SMART SM00062 67 296 3.1E-20 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_2361 f4bdf0df60eb3682c06791db687620bd 563 PRINTS PR00723 Subtilisin serine protease family (S8) signature 207 220 3.1E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_2361 f4bdf0df60eb3682c06791db687620bd 563 PRINTS PR00723 Subtilisin serine protease family (S8) signature 169 188 3.1E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_2361 f4bdf0df60eb3682c06791db687620bd 563 PRINTS PR00723 Subtilisin serine protease family (S8) signature 365 381 3.1E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_2361 f4bdf0df60eb3682c06791db687620bd 563 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 211 221 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Amir_2361 f4bdf0df60eb3682c06791db687620bd 563 Pfam PF01483 Proprotein convertase P-domain 483 563 4.5E-17 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 Amir_2361 f4bdf0df60eb3682c06791db687620bd 563 Gene3D G3DSA:2.60.120.260 478 563 1.1E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_2361 f4bdf0df60eb3682c06791db687620bd 563 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 366 376 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_2361 f4bdf0df60eb3682c06791db687620bd 563 SUPERFAMILY SSF52743 142 407 9.82E-74 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_2361 f4bdf0df60eb3682c06791db687620bd 563 Gene3D G3DSA:3.30.70.80 64 131 1.5E-9 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Amir_2361 f4bdf0df60eb3682c06791db687620bd 563 SUPERFAMILY SSF54897 68 138 1.53E-5 T 14-10-2018 Amir_2361 f4bdf0df60eb3682c06791db687620bd 563 Pfam PF00082 Subtilase family 176 404 4.1E-36 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_2361 f4bdf0df60eb3682c06791db687620bd 563 SUPERFAMILY SSF49785 452 563 9.78E-18 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_2361 f4bdf0df60eb3682c06791db687620bd 563 Gene3D G3DSA:3.40.50.200 140 422 1.8E-88 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_2361 f4bdf0df60eb3682c06791db687620bd 563 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 174 185 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_3696 9e0a7d2d04e4d158895a4f915f49b995 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 209 1.7E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3696 9e0a7d2d04e4d158895a4f915f49b995 217 Gene3D G3DSA:3.40.50.12740 2 215 2.3E-64 T 14-10-2018 Amir_3696 9e0a7d2d04e4d158895a4f915f49b995 217 SUPERFAMILY SSF46894 142 215 1.56E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_3696 9e0a7d2d04e4d158895a4f915f49b995 217 Pfam PF00072 Response regulator receiver domain 4 113 5.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3696 9e0a7d2d04e4d158895a4f915f49b995 217 SUPERFAMILY SSF52172 2 130 1.07E-31 T 14-10-2018 IPR011006 CheY-like superfamily Amir_3696 9e0a7d2d04e4d158895a4f915f49b995 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 5.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3696 9e0a7d2d04e4d158895a4f915f49b995 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 5.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3696 9e0a7d2d04e4d158895a4f915f49b995 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 5.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3696 9e0a7d2d04e4d158895a4f915f49b995 217 SMART SM00448 2 115 5.8E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3696 9e0a7d2d04e4d158895a4f915f49b995 217 SMART SM00421 152 209 1.3E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5228 82c34b017fb0cc7a4d2dbdfdf9bbd8a5 179 SUPERFAMILY SSF88659 116 173 5.42E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5228 82c34b017fb0cc7a4d2dbdfdf9bbd8a5 179 Pfam PF08281 Sigma-70, region 4 120 171 5.3E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_5228 82c34b017fb0cc7a4d2dbdfdf9bbd8a5 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 172 6.6E-20 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_5228 82c34b017fb0cc7a4d2dbdfdf9bbd8a5 179 Pfam PF04542 Sigma-70 region 2 19 87 8.5E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5228 82c34b017fb0cc7a4d2dbdfdf9bbd8a5 179 Gene3D G3DSA:1.10.10.10 114 178 8.1E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5228 82c34b017fb0cc7a4d2dbdfdf9bbd8a5 179 Gene3D G3DSA:1.10.1740.10 4 83 2.0E-16 T 14-10-2018 Amir_5228 82c34b017fb0cc7a4d2dbdfdf9bbd8a5 179 SUPERFAMILY SSF88946 6 101 3.57E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5776 3e6b66acc9adcec2368858d572fdc20b 354 SUPERFAMILY SSF52540 47 315 3.57E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5776 3e6b66acc9adcec2368858d572fdc20b 354 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 71 200 1.7E-63 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Amir_5776 3e6b66acc9adcec2368858d572fdc20b 354 Gene3D G3DSA:3.40.50.300 34 225 4.9E-44 T 14-10-2018 Amir_5776 3e6b66acc9adcec2368858d572fdc20b 354 PIRSF PIRSF002849 18 345 1.6E-130 T 14-10-2018 Amir_5776 3e6b66acc9adcec2368858d572fdc20b 354 Gene3D G3DSA:1.10.8.300 232 340 1.0E-31 T 14-10-2018 Amir_1569 2ceaa191bbfa9b3b22928b741b2c5efa 389 SUPERFAMILY SSF47203 227 381 5.48E-53 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_1569 2ceaa191bbfa9b3b22928b741b2c5efa 389 Gene3D G3DSA:2.40.110.10 124 234 3.2E-37 T 14-10-2018 Amir_1569 2ceaa191bbfa9b3b22928b741b2c5efa 389 Gene3D G3DSA:1.20.140.10 235 388 1.1E-50 T 14-10-2018 Amir_1569 2ceaa191bbfa9b3b22928b741b2c5efa 389 PIRSF PIRSF016578 73 101 3.3 T 14-10-2018 Amir_1569 2ceaa191bbfa9b3b22928b741b2c5efa 389 PIRSF PIRSF016578 134 225 0.0011 T 14-10-2018 Amir_1569 2ceaa191bbfa9b3b22928b741b2c5efa 389 PIRSF PIRSF016578 232 385 3.9E-8 T 14-10-2018 Amir_1569 2ceaa191bbfa9b3b22928b741b2c5efa 389 PIRSF PIRSF016578 32 75 5.1 T 14-10-2018 Amir_1569 2ceaa191bbfa9b3b22928b741b2c5efa 389 SUPERFAMILY SSF56645 1 242 3.14E-70 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_1569 2ceaa191bbfa9b3b22928b741b2c5efa 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amir_1569 2ceaa191bbfa9b3b22928b741b2c5efa 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 127 139 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amir_1569 2ceaa191bbfa9b3b22928b741b2c5efa 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 121 9.0E-21 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_1569 2ceaa191bbfa9b3b22928b741b2c5efa 389 Gene3D G3DSA:1.10.540.10 1 122 6.8E-26 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_1569 2ceaa191bbfa9b3b22928b741b2c5efa 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 378 3.2E-46 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_1569 2ceaa191bbfa9b3b22928b741b2c5efa 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 208 2.4E-22 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amir_3264 fbb6194139a1fca2a978b2fee7ab9f9b 546 Gene3D G3DSA:3.40.50.300 21 229 5.1E-22 T 14-10-2018 Amir_3264 fbb6194139a1fca2a978b2fee7ab9f9b 546 Pfam PF03354 Phage Terminase 73 522 6.1E-46 T 14-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type Amir_4597 a548f7a58f6bc9ec3ac64a867553e021 582 SUPERFAMILY SSF48452 86 249 1.39E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4597 a548f7a58f6bc9ec3ac64a867553e021 582 Pfam PF00931 NB-ARC domain 282 466 2.3E-7 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 Amir_4597 a548f7a58f6bc9ec3ac64a867553e021 582 SMART SM00862 5 81 2.2E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4597 a548f7a58f6bc9ec3ac64a867553e021 582 Gene3D G3DSA:1.25.40.10 86 272 8.7E-38 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4597 a548f7a58f6bc9ec3ac64a867553e021 582 SMART SM01043 88 232 2.5E-35 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_4597 a548f7a58f6bc9ec3ac64a867553e021 582 Pfam PF00486 Transcriptional regulatory protein, C terminal 12 79 2.9E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4597 a548f7a58f6bc9ec3ac64a867553e021 582 Gene3D G3DSA:1.10.10.10 1 82 2.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4597 a548f7a58f6bc9ec3ac64a867553e021 582 Pfam PF03704 Bacterial transcriptional activator domain 88 232 1.7E-32 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_4597 a548f7a58f6bc9ec3ac64a867553e021 582 SUPERFAMILY SSF52540 247 476 2.32E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4597 a548f7a58f6bc9ec3ac64a867553e021 582 SUPERFAMILY SSF46894 5 81 7.09E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4348 615f952ee7bc884d5ec0bbeb97528f18 160 SUPERFAMILY SSF54909 64 140 6.97E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_4348 615f952ee7bc884d5ec0bbeb97528f18 160 Gene3D G3DSA:1.10.10.10 1 54 2.9E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4348 615f952ee7bc884d5ec0bbeb97528f18 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 50 2.6E-9 T 14-10-2018 Amir_4348 615f952ee7bc884d5ec0bbeb97528f18 160 SUPERFAMILY SSF46785 4 64 2.78E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4348 615f952ee7bc884d5ec0bbeb97528f18 160 Pfam PF01037 Lrp/AsnC ligand binding domain 71 140 9.2E-19 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Amir_4348 615f952ee7bc884d5ec0bbeb97528f18 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 9.4E-6 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_4348 615f952ee7bc884d5ec0bbeb97528f18 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 9.4E-6 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_4348 615f952ee7bc884d5ec0bbeb97528f18 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 9.4E-6 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_4348 615f952ee7bc884d5ec0bbeb97528f18 160 Gene3D G3DSA:3.30.70.920 57 144 1.8E-22 T 14-10-2018 Amir_4348 615f952ee7bc884d5ec0bbeb97528f18 160 SMART SM00344 4 110 5.5E-21 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Amir_7069 b73b363ca635cddcf0387c95886bbfc3 543 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 182 193 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Amir_7069 b73b363ca635cddcf0387c95886bbfc3 543 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 59 523 1.1E-104 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 Amir_7069 b73b363ca635cddcf0387c95886bbfc3 543 Gene3D G3DSA:3.50.30.10 8 224 3.4E-51 T 14-10-2018 Amir_7069 b73b363ca635cddcf0387c95886bbfc3 543 SUPERFAMILY SSF52009 123 225 1.15E-28 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Amir_7069 b73b363ca635cddcf0387c95886bbfc3 543 Pfam PF00391 PEP-utilising enzyme, mobile domain 150 221 1.1E-22 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Amir_7069 b73b363ca635cddcf0387c95886bbfc3 543 Pfam PF05524 PEP-utilising enzyme, N-terminal 8 124 1.2E-18 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Amir_7069 b73b363ca635cddcf0387c95886bbfc3 543 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 247 513 2.5E-77 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Amir_7069 b73b363ca635cddcf0387c95886bbfc3 543 SUPERFAMILY SSF47831 34 141 7.45E-20 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Amir_7069 b73b363ca635cddcf0387c95886bbfc3 543 SUPERFAMILY SSF51621 246 522 2.88E-84 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Amir_7069 b73b363ca635cddcf0387c95886bbfc3 543 PIRSF PIRSF000732 1 541 1.4E-143 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 Amir_7069 b73b363ca635cddcf0387c95886bbfc3 543 Gene3D G3DSA:3.20.20.60 242 541 3.2E-91 T 14-10-2018 Amir_7069 b73b363ca635cddcf0387c95886bbfc3 543 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 421 436 3.5E-18 T 14-10-2018 Amir_7069 b73b363ca635cddcf0387c95886bbfc3 543 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 438 453 3.5E-18 T 14-10-2018 Amir_7069 b73b363ca635cddcf0387c95886bbfc3 543 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 474 486 3.5E-18 T 14-10-2018 Amir_7069 b73b363ca635cddcf0387c95886bbfc3 543 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 277 296 3.5E-18 T 14-10-2018 Amir_7069 b73b363ca635cddcf0387c95886bbfc3 543 Gene3D G3DSA:1.10.274.10 25 144 3.4E-51 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Amir_1043 3e7e03fc865f39c3ef586942836c082c 125 Pfam PF12680 SnoaL-like domain 16 111 5.5E-12 T 14-10-2018 IPR037401 SnoaL-like domain Amir_1043 3e7e03fc865f39c3ef586942836c082c 125 SUPERFAMILY SSF54427 13 122 7.4E-16 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_1043 3e7e03fc865f39c3ef586942836c082c 125 Gene3D G3DSA:3.10.450.50 11 125 2.4E-15 T 14-10-2018 Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 Pfam PF05593 RHS Repeat 720 757 7.3E-8 T 14-10-2018 IPR031325 RHS repeat Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 Pfam PF05593 RHS Repeat 1155 1194 1.3E-4 T 14-10-2018 IPR031325 RHS repeat Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 Pfam PF05593 RHS Repeat 867 903 7.4E-7 T 14-10-2018 IPR031325 RHS repeat Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 Pfam PF05593 RHS Repeat 1179 1208 1.1E-5 T 14-10-2018 IPR031325 RHS repeat Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 Pfam PF05593 RHS Repeat 657 694 4.8E-9 T 14-10-2018 IPR031325 RHS repeat Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 Pfam PF05593 RHS Repeat 762 799 5.7E-6 T 14-10-2018 IPR031325 RHS repeat Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 Pfam PF05593 RHS Repeat 807 840 7.8E-6 T 14-10-2018 IPR031325 RHS repeat Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1301 1374 2.1E-21 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 Gene3D G3DSA:2.180.10.10 1093 1374 9.0E-33 T 14-10-2018 Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 SUPERFAMILY SSF63829 647 903 1.5E-5 T 14-10-2018 Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 Gene3D G3DSA:3.90.930.1 706 852 1.5E-9 T 14-10-2018 Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 Gene3D G3DSA:3.90.930.1 556 704 1.3E-6 T 14-10-2018 Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 Gene3D G3DSA:3.90.930.1 854 972 3.4E-10 T 14-10-2018 Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 909 947 2.4E-5 T 14-10-2018 IPR006530 YD repeat Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1171 1195 9.5E-4 T 14-10-2018 IPR006530 YD repeat Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 867 907 2.6E-6 T 14-10-2018 IPR006530 YD repeat Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 553 588 3.0E-4 T 14-10-2018 IPR006530 YD repeat Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 720 759 5.1E-8 T 14-10-2018 IPR006530 YD repeat Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 637 674 0.0015 T 14-10-2018 IPR006530 YD repeat Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 762 801 1.2E-6 T 14-10-2018 IPR006530 YD repeat Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 807 843 1.5E-6 T 14-10-2018 IPR006530 YD repeat Amir_0572 391b49a16d81be202e9ee8a9a9df47ae 1509 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1179 1214 1.3E-7 T 14-10-2018 IPR006530 YD repeat Amir_3074 32ccf3acddde78924c79bae02115948a 109 Gene3D G3DSA:1.10.3730.20 1 108 3.1E-27 T 14-10-2018 Amir_3074 32ccf3acddde78924c79bae02115948a 109 SUPERFAMILY SSF103481 7 104 3.4E-12 T 14-10-2018 Amir_3074 32ccf3acddde78924c79bae02115948a 109 Pfam PF00893 Small Multidrug Resistance protein 3 95 2.1E-21 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Amir_2216 96d96d42938b0049e02ae9bd92830fed 266 SUPERFAMILY SSF51735 2 227 7.08E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2216 96d96d42938b0049e02ae9bd92830fed 266 Gene3D G3DSA:3.40.50.720 2 251 1.8E-63 T 14-10-2018 Amir_2216 96d96d42938b0049e02ae9bd92830fed 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_2216 96d96d42938b0049e02ae9bd92830fed 266 Pfam PF00106 short chain dehydrogenase 7 191 2.6E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2216 96d96d42938b0049e02ae9bd92830fed 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.1E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2216 96d96d42938b0049e02ae9bd92830fed 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2216 96d96d42938b0049e02ae9bd92830fed 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2216 96d96d42938b0049e02ae9bd92830fed 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.1E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2216 96d96d42938b0049e02ae9bd92830fed 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.1E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2216 96d96d42938b0049e02ae9bd92830fed 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2216 96d96d42938b0049e02ae9bd92830fed 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2216 96d96d42938b0049e02ae9bd92830fed 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2216 96d96d42938b0049e02ae9bd92830fed 266 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 189 1.5E-4 T 14-10-2018 Amir_2216 96d96d42938b0049e02ae9bd92830fed 266 PIRSF PIRSF000126 1 256 3.9E-71 T 14-10-2018 Amir_1249 c52dfa62ee43bdf93911d973e0eedf28 654 SMART SM00306 231 330 6.0E-4 T 14-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amir_1249 c52dfa62ee43bdf93911d973e0eedf28 654 SUPERFAMILY SSF51294 237 537 1.92E-13 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amir_1249 c52dfa62ee43bdf93911d973e0eedf28 654 SMART SM00322 11 74 0.0094 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Amir_1249 c52dfa62ee43bdf93911d973e0eedf28 654 Pfam PF02562 PhoH-like protein 118 233 8.0E-50 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 Amir_1249 c52dfa62ee43bdf93911d973e0eedf28 654 Pfam PF02562 PhoH-like protein 531 626 5.1E-35 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 Amir_1249 c52dfa62ee43bdf93911d973e0eedf28 654 SUPERFAMILY SSF52540 537 589 2.13E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1249 c52dfa62ee43bdf93911d973e0eedf28 654 Gene3D G3DSA:3.40.50.300 115 238 1.8E-40 T 14-10-2018 Amir_1249 c52dfa62ee43bdf93911d973e0eedf28 654 Gene3D G3DSA:3.40.50.300 503 626 5.1E-27 T 14-10-2018 Amir_1249 c52dfa62ee43bdf93911d973e0eedf28 654 SUPERFAMILY SSF55608 398 472 5.02E-5 T 14-10-2018 IPR027434 Homing endonuclease Amir_1249 c52dfa62ee43bdf93911d973e0eedf28 654 SUPERFAMILY SSF52540 117 232 8.67E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1249 c52dfa62ee43bdf93911d973e0eedf28 654 Gene3D G3DSA:2.170.16.10 239 310 7.6E-9 T 14-10-2018 Amir_1249 c52dfa62ee43bdf93911d973e0eedf28 654 Gene3D G3DSA:3.10.28.10 385 492 6.3E-13 T 14-10-2018 IPR027434 Homing endonuclease Amir_2649 6a7525958b5ccc8b27c9c6fea80db50f 257 Pfam PF00121 Triosephosphate isomerase 10 238 3.5E-46 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_2649 6a7525958b5ccc8b27c9c6fea80db50f 257 SUPERFAMILY SSF51351 7 248 1.28E-56 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_2649 6a7525958b5ccc8b27c9c6fea80db50f 257 Gene3D G3DSA:3.20.20.70 2 253 8.8E-73 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_7047 1ae8030d6c51a75fc300574219ba02d6 382 Pfam PF00929 Exonuclease 5 150 1.1E-15 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Amir_7047 1ae8030d6c51a75fc300574219ba02d6 382 SUPERFAMILY SSF53098 3 153 1.19E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_7047 1ae8030d6c51a75fc300574219ba02d6 382 Gene3D G3DSA:3.40.50.10190 292 370 1.0E-9 T 14-10-2018 IPR036420 BRCT domain superfamily Amir_7047 1ae8030d6c51a75fc300574219ba02d6 382 SMART SM00479 2 159 2.7E-22 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Amir_7047 1ae8030d6c51a75fc300574219ba02d6 382 Gene3D G3DSA:3.30.420.10 2 155 1.1E-34 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amir_3846 04c003f4549997cb40812c2a85065ba2 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 1.8E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3846 04c003f4549997cb40812c2a85065ba2 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_3846 04c003f4549997cb40812c2a85065ba2 206 SUPERFAMILY SSF46689 4 75 1.49E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3846 04c003f4549997cb40812c2a85065ba2 206 Gene3D G3DSA:1.10.10.60 4 52 2.8E-20 T 14-10-2018 Amir_3846 04c003f4549997cb40812c2a85065ba2 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3846 04c003f4549997cb40812c2a85065ba2 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 7.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3846 04c003f4549997cb40812c2a85065ba2 206 Gene3D G3DSA:1.10.357.10 54 194 4.9E-18 T 14-10-2018 Amir_5106 50f29180141e3acdd70009bee9298755 244 Gene3D G3DSA:3.40.50.1820 3 244 3.9E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5106 50f29180141e3acdd70009bee9298755 244 SUPERFAMILY SSF53474 19 244 5.68E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6973 a2cbfc3f7c0ddfaeac67bbd24a23b90e 490 SUPERFAMILY SSF51735 250 486 9.34E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6973 a2cbfc3f7c0ddfaeac67bbd24a23b90e 490 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 326 337 9.5E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6973 a2cbfc3f7c0ddfaeac67bbd24a23b90e 490 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 397 416 9.5E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6973 a2cbfc3f7c0ddfaeac67bbd24a23b90e 490 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 371 387 9.5E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6973 a2cbfc3f7c0ddfaeac67bbd24a23b90e 490 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 417 434 9.5E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6973 a2cbfc3f7c0ddfaeac67bbd24a23b90e 490 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 255 272 9.5E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6973 a2cbfc3f7c0ddfaeac67bbd24a23b90e 490 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 450 470 9.5E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6973 a2cbfc3f7c0ddfaeac67bbd24a23b90e 490 Gene3D G3DSA:3.40.50.720 249 489 4.1E-59 T 14-10-2018 Amir_6973 a2cbfc3f7c0ddfaeac67bbd24a23b90e 490 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 254 431 3.1E-5 T 14-10-2018 Amir_6973 a2cbfc3f7c0ddfaeac67bbd24a23b90e 490 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 384 412 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_6973 a2cbfc3f7c0ddfaeac67bbd24a23b90e 490 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 377 385 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6973 a2cbfc3f7c0ddfaeac67bbd24a23b90e 490 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 397 416 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6973 a2cbfc3f7c0ddfaeac67bbd24a23b90e 490 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 326 337 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6973 a2cbfc3f7c0ddfaeac67bbd24a23b90e 490 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 260 483 6.1E-43 T 14-10-2018 Amir_4679 685ed8e316cb911d287d7cba4646b513 590 Pfam PF00069 Protein kinase domain 16 260 9.9E-41 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_4679 685ed8e316cb911d287d7cba4646b513 590 Pfam PF14016 Protein of unknown function (DUF4232) 457 585 7.7E-27 T 14-10-2018 IPR025326 Protein of unknown function DUF4232 Amir_4679 685ed8e316cb911d287d7cba4646b513 590 SUPERFAMILY SSF56112 12 344 9.98E-64 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_4679 685ed8e316cb911d287d7cba4646b513 590 SMART SM00220 15 269 2.4E-49 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_4679 685ed8e316cb911d287d7cba4646b513 590 Gene3D G3DSA:1.10.510.10 95 272 1.9E-39 T 14-10-2018 Amir_4679 685ed8e316cb911d287d7cba4646b513 590 Gene3D G3DSA:3.30.200.20 5 93 3.9E-16 T 14-10-2018 Amir_4679 685ed8e316cb911d287d7cba4646b513 590 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 21 43 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_4679 685ed8e316cb911d287d7cba4646b513 590 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 133 145 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_1669 30c7348981aa7529638b3aed9901fa6f 377 SUPERFAMILY SSF63825 24 205 1.46E-9 T 14-10-2018 Amir_6730 59c3aeb052d0923166c922b002be1bcc 438 SUPERFAMILY SSF69075 316 418 8.37E-17 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amir_6730 59c3aeb052d0923166c922b002be1bcc 438 Gene3D G3DSA:3.30.460.30 1 156 6.2E-53 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amir_6730 59c3aeb052d0923166c922b002be1bcc 438 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 418 1.9E-118 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amir_6730 59c3aeb052d0923166c922b002be1bcc 438 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 171 304 3.6E-25 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Amir_6730 59c3aeb052d0923166c922b002be1bcc 438 Gene3D G3DSA:3.40.50.720 160 310 5.7E-35 T 14-10-2018 Amir_6730 59c3aeb052d0923166c922b002be1bcc 438 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 415 25.273 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amir_6730 59c3aeb052d0923166c922b002be1bcc 438 SUPERFAMILY SSF69742 1 156 7.32E-44 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amir_6730 59c3aeb052d0923166c922b002be1bcc 438 PIRSF PIRSF000445 1 431 4.6E-131 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amir_6730 59c3aeb052d0923166c922b002be1bcc 438 SUPERFAMILY SSF51735 160 304 6.42E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6730 59c3aeb052d0923166c922b002be1bcc 438 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 319 417 5.0E-21 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amir_6730 59c3aeb052d0923166c922b002be1bcc 438 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amir_6730 59c3aeb052d0923166c922b002be1bcc 438 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 2.1E-41 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amir_6583 81ab4c6fe5c4aba2688a25baa32c6a7c 350 Gene3D G3DSA:3.30.1360.10 13 216 2.3E-83 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6583 81ab4c6fe5c4aba2688a25baa32c6a7c 350 SUPERFAMILY SSF56553 48 169 1.57E-43 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6583 81ab4c6fe5c4aba2688a25baa32c6a7c 350 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 218 2.6E-19 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6583 81ab4c6fe5c4aba2688a25baa32c6a7c 350 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 57 149 1.4E-25 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6583 81ab4c6fe5c4aba2688a25baa32c6a7c 350 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 19 310 1.1E-113 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6583 81ab4c6fe5c4aba2688a25baa32c6a7c 350 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 243 301 4.5E-26 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6583 81ab4c6fe5c4aba2688a25baa32c6a7c 350 Gene3D G3DSA:2.170.120.12 48 168 2.3E-83 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6583 81ab4c6fe5c4aba2688a25baa32c6a7c 350 Gene3D G3DSA:1.10.150.20 239 311 6.6E-28 T 14-10-2018 Amir_6583 81ab4c6fe5c4aba2688a25baa32c6a7c 350 SUPERFAMILY SSF47789 246 318 1.28E-23 T 14-10-2018 Amir_6583 81ab4c6fe5c4aba2688a25baa32c6a7c 350 SUPERFAMILY SSF55257 13 220 5.1E-25 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6583 81ab4c6fe5c4aba2688a25baa32c6a7c 350 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 250 317 8.0E-30 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6583 81ab4c6fe5c4aba2688a25baa32c6a7c 350 SMART SM00662 18 225 5.7E-97 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6583 81ab4c6fe5c4aba2688a25baa32c6a7c 350 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 3 311 34.72 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_2980 ba10bdea37fb5047fd55ef4ba270be08 271 Pfam PF13560 Helix-turn-helix domain 4 82 2.3E-15 T 14-10-2018 Amir_2980 ba10bdea37fb5047fd55ef4ba270be08 271 SUPERFAMILY SSF47413 27 75 2.7E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2980 ba10bdea37fb5047fd55ef4ba270be08 271 Gene3D G3DSA:1.10.260.40 3 83 1.7E-7 T 14-10-2018 Amir_2980 ba10bdea37fb5047fd55ef4ba270be08 271 SMART SM00530 8 80 1.6E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_5162 b03f099d179cea3671128b12288108a5 312 Gene3D G3DSA:3.40.50.300 2 237 1.4E-57 T 14-10-2018 Amir_5162 b03f099d179cea3671128b12288108a5 312 SMART SM00382 34 211 1.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5162 b03f099d179cea3671128b12288108a5 312 Pfam PF00005 ABC transporter 26 164 8.0E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5162 b03f099d179cea3671128b12288108a5 312 SUPERFAMILY SSF52540 4 228 2.99E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5162 b03f099d179cea3671128b12288108a5 312 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 SUPERFAMILY SSF52540 12 231 7.41E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 17 623 7.0E-271 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 SUPERFAMILY SSF54980 424 538 9.11E-27 T 14-10-2018 IPR035647 EF-G domain III/V-like Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 Pfam PF00009 Elongation factor Tu GTP binding domain 16 220 1.9E-51 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 18 157 7.3E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 SUPERFAMILY SSF50447 172 325 1.81E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 Gene3D G3DSA:3.30.70.240 415 507 5.7E-116 T 14-10-2018 Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 Pfam PF00679 Elongation factor G C-terminus 423 506 6.5E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 Pfam PF03144 Elongation factor Tu domain 2 244 314 3.1E-11 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 Gene3D G3DSA:2.40.50.250 508 623 5.7E-116 T 14-10-2018 Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 Gene3D G3DSA:2.40.30.10 224 324 6.6E-31 T 14-10-2018 Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 PRINTS PR00315 GTP-binding elongation factor signature 19 32 3.3E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 PRINTS PR00315 GTP-binding elongation factor signature 103 114 3.3E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 PRINTS PR00315 GTP-binding elongation factor signature 139 148 3.3E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 PRINTS PR00315 GTP-binding elongation factor signature 63 71 3.3E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 PRINTS PR00315 GTP-binding elongation factor signature 87 97 3.3E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 Gene3D G3DSA:3.30.70.870 332 615 5.7E-116 T 14-10-2018 Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 Gene3D G3DSA:3.40.50.300 14 223 6.4E-57 T 14-10-2018 Amir_0759 5d2aafae0bfceb8f5bcf7e5cdbb9e085 633 SUPERFAMILY SSF54980 327 413 1.44E-10 T 14-10-2018 IPR035647 EF-G domain III/V-like Amir_0062 ab736740802ce76c705075050245ee8b 489 SUPERFAMILY SSF88946 22 114 2.83E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_0062 ab736740802ce76c705075050245ee8b 489 Pfam PF04542 Sigma-70 region 2 40 99 3.1E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_0062 ab736740802ce76c705075050245ee8b 489 Gene3D G3DSA:1.10.1740.10 14 102 7.5E-16 T 14-10-2018 Amir_0062 ab736740802ce76c705075050245ee8b 489 Gene3D G3DSA:1.10.10.10 116 192 4.9E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0062 ab736740802ce76c705075050245ee8b 489 Gene3D G3DSA:1.10.10.1320 205 273 8.2E-6 T 14-10-2018 Amir_0062 ab736740802ce76c705075050245ee8b 489 SUPERFAMILY SSF88659 130 188 7.48E-7 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_0062 ab736740802ce76c705075050245ee8b 489 Pfam PF13490 Putative zinc-finger 204 237 1.0E-6 T 14-10-2018 IPR027383 Putative zinc-finger Amir_0062 ab736740802ce76c705075050245ee8b 489 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 36 188 2.2E-15 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_3907 1a2c2f11d5cfe0c64a0ef5596d82c571 296 Gene3D G3DSA:3.20.20.80 29 296 4.4E-79 T 14-10-2018 Amir_3907 1a2c2f11d5cfe0c64a0ef5596d82c571 296 Pfam PF00704 Glycosyl hydrolases family 18 91 193 4.2E-15 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 Amir_3907 1a2c2f11d5cfe0c64a0ef5596d82c571 296 SUPERFAMILY SSF51445 32 269 5.74E-57 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_3907 1a2c2f11d5cfe0c64a0ef5596d82c571 296 ProSitePatterns PS01095 Chitinases family 18 active site. 148 156 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 Amir_5828 127f998b8a57969f764ca99999c73e5f 299 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 184 3.4E-51 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Amir_5828 127f998b8a57969f764ca99999c73e5f 299 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 295 17.677 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_5828 127f998b8a57969f764ca99999c73e5f 299 Pfam PF09142 tRNA Pseudouridine synthase II, C terminal 241 295 5.3E-18 T 14-10-2018 IPR015225 tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_5828 127f998b8a57969f764ca99999c73e5f 299 SUPERFAMILY SSF55120 11 226 5.6E-72 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_5828 127f998b8a57969f764ca99999c73e5f 299 SUPERFAMILY SSF88697 241 297 3.03E-12 T 14-10-2018 IPR015947 PUA-like superfamily Amir_5828 127f998b8a57969f764ca99999c73e5f 299 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 185 226 3.7E-12 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 Amir_5828 127f998b8a57969f764ca99999c73e5f 299 Gene3D G3DSA:2.30.130.10 233 295 1.2E-23 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 Amir_5828 127f998b8a57969f764ca99999c73e5f 299 Gene3D G3DSA:3.30.2350.10 12 232 1.1E-87 T 14-10-2018 Amir_5828 127f998b8a57969f764ca99999c73e5f 299 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 223 4.3E-69 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_2277 c6b0af0b637e39cd56edd3bd8b223f24 1092 Pfam PF03308 ArgK protein 167 399 2.5E-39 T 14-10-2018 Amir_2277 c6b0af0b637e39cd56edd3bd8b223f24 1092 SUPERFAMILY SSF52540 159 404 5.02E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2277 c6b0af0b637e39cd56edd3bd8b223f24 1092 Hamap MF_02050 Fused isobutyryl-CoA mutase [icmF]. 13 1092 16.581 T 14-10-2018 IPR033669 Fused isobutyryl-CoA mutase GO:0003924|GO:0005525|GO:0006637|GO:0031419|GO:0034784|GO:0047727 Amir_2277 c6b0af0b637e39cd56edd3bd8b223f24 1092 Gene3D G3DSA:3.20.20.240 557 1088 5.1E-179 T 14-10-2018 Amir_2277 c6b0af0b637e39cd56edd3bd8b223f24 1092 SUPERFAMILY SSF51703 513 1088 1.65E-149 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amir_2277 c6b0af0b637e39cd56edd3bd8b223f24 1092 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 14 126 2.3E-16 T 14-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amir_2277 c6b0af0b637e39cd56edd3bd8b223f24 1092 Pfam PF02310 B12 binding domain 16 111 6.5E-11 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amir_2277 c6b0af0b637e39cd56edd3bd8b223f24 1092 SUPERFAMILY SSF52242 11 145 8.5E-41 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amir_2277 c6b0af0b637e39cd56edd3bd8b223f24 1092 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 724 1091 3.9E-91 T 14-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amir_2277 c6b0af0b637e39cd56edd3bd8b223f24 1092 Gene3D G3DSA:3.40.50.280 9 152 4.1E-57 T 14-10-2018 Amir_2277 c6b0af0b637e39cd56edd3bd8b223f24 1092 Pfam PF01642 Methylmalonyl-CoA mutase 570 1086 3.6E-142 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amir_2277 c6b0af0b637e39cd56edd3bd8b223f24 1092 Gene3D G3DSA:3.40.50.300 195 403 3.7E-57 T 14-10-2018 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 SMART SM00387 311 454 5.5E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 SUPERFAMILY SSF47384 207 267 3.92E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 SUPERFAMILY SSF55874 269 452 3.27E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 SUPERFAMILY SSF47226 4 128 8.9E-26 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 207 266 1.1E-14 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 Gene3D G3DSA:3.30.565.10 267 453 1.7E-55 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 Gene3D G3DSA:2.40.50.180 638 698 2.7E-11 T 14-10-2018 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 Gene3D G3DSA:2.40.50.180 477 544 6.2E-38 T 14-10-2018 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 Gene3D G3DSA:2.30.30.40 454 585 6.2E-38 T 14-10-2018 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 SUPERFAMILY SSF50341 453 588 7.72E-30 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 SMART SM00073 1 101 7.9E-19 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 Gene3D G3DSA:1.10.287.560 206 266 1.2E-17 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 Pfam PF01627 Hpt domain 7 98 3.7E-14 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 SMART SM01231 206 266 8.3E-19 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 5.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 451 5.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 5.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 5.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 SUPERFAMILY SSF50341 617 737 7.85E-16 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 453 4.9E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 Pfam PF01584 CheW-like domain 458 591 8.2E-25 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 Pfam PF01584 CheW-like domain 618 738 6.4E-12 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 Gene3D G3DSA:1.20.120.160 1 144 1.4E-34 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 SMART SM00260 446 589 1.9E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Amir_2325 ad7e3ba4f6f2013a28a11b96f6d21ee9 760 SMART SM00260 604 740 0.0012 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Amir_2031 d9f0348c6699e1ac5486f5613358d962 500 SUPERFAMILY SSF90123 57 206 3.66E-8 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_2031 d9f0348c6699e1ac5486f5613358d962 500 SMART SM00382 270 466 5.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2031 d9f0348c6699e1ac5486f5613358d962 500 Pfam PF00005 ABC transporter 261 420 3.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2031 d9f0348c6699e1ac5486f5613358d962 500 ProSitePatterns PS00211 ABC transporters family signature. 391 405 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_2031 d9f0348c6699e1ac5486f5613358d962 500 SUPERFAMILY SSF52540 238 490 3.97E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2031 d9f0348c6699e1ac5486f5613358d962 500 Gene3D G3DSA:3.40.50.300 233 493 1.2E-75 T 14-10-2018 Amir_4419 5320ee43681b787af78d6b546fa369b8 229 Pfam PF03473 MOSC domain 51 161 1.5E-21 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 Amir_4419 5320ee43681b787af78d6b546fa369b8 229 Gene3D G3DSA:2.40.33.20 2 228 1.4E-75 T 14-10-2018 Amir_4419 5320ee43681b787af78d6b546fa369b8 229 SUPERFAMILY SSF50800 4 219 4.71E-67 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Amir_2793 63f0d31c35532d4349fe4ebf76e4cf58 255 Gene3D G3DSA:3.30.450.40 9 186 3.2E-24 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_2793 63f0d31c35532d4349fe4ebf76e4cf58 255 SUPERFAMILY SSF55781 35 183 2.62E-21 T 14-10-2018 Amir_2793 63f0d31c35532d4349fe4ebf76e4cf58 255 Pfam PF03861 ANTAR domain 188 239 3.3E-14 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_2793 63f0d31c35532d4349fe4ebf76e4cf58 255 Gene3D G3DSA:1.10.10.10 187 246 5.3E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2793 63f0d31c35532d4349fe4ebf76e4cf58 255 SUPERFAMILY SSF52172 176 239 2.09E-5 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2793 63f0d31c35532d4349fe4ebf76e4cf58 255 PIRSF PIRSF036625 3 249 1.5E-58 T 14-10-2018 IPR012074 GAF-ANTAR transcription anti-termination regulator, putative Amir_2793 63f0d31c35532d4349fe4ebf76e4cf58 255 SMART SM00065 35 183 0.003 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2793 63f0d31c35532d4349fe4ebf76e4cf58 255 SMART SM01012 185 240 3.2E-14 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_2793 63f0d31c35532d4349fe4ebf76e4cf58 255 Pfam PF13185 GAF domain 35 173 1.7E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_3745 0f7e3f1883f928e87c1a5d9519fc17cb 207 SUPERFAMILY SSF160104 3 191 6.54E-27 T 14-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 Amir_3745 0f7e3f1883f928e87c1a5d9519fc17cb 207 Pfam PF06314 Acetoacetate decarboxylase (ADC) 27 112 7.1E-13 T 14-10-2018 IPR010451 Acetoacetate decarboxylase GO:0016829 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 Amir_3745 0f7e3f1883f928e87c1a5d9519fc17cb 207 Gene3D G3DSA:2.40.400.10 2 192 7.0E-19 T 14-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 Amir_6624 720fea8b1f133f601d663376b2a87c9b 290 Gene3D G3DSA:3.90.1200.10 92 200 2.2E-7 T 14-10-2018 Amir_6624 720fea8b1f133f601d663376b2a87c9b 290 SUPERFAMILY SSF56112 33 251 5.1E-21 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_6624 720fea8b1f133f601d663376b2a87c9b 290 Pfam PF01636 Phosphotransferase enzyme family 104 230 1.9E-8 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_6394 3c211d44be67fd88f5e0a9f5a18bd94d 446 Pfam PF00375 Sodium:dicarboxylate symporter family 15 412 1.5E-102 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Amir_6394 3c211d44be67fd88f5e0a9f5a18bd94d 446 SUPERFAMILY SSF118215 15 412 1.96E-95 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Amir_6394 3c211d44be67fd88f5e0a9f5a18bd94d 446 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 1.1E-28 T 14-10-2018 Amir_6394 3c211d44be67fd88f5e0a9f5a18bd94d 446 PRINTS PR00173 Glutamate-aspartate symporter signature 363 383 1.1E-28 T 14-10-2018 Amir_6394 3c211d44be67fd88f5e0a9f5a18bd94d 446 PRINTS PR00173 Glutamate-aspartate symporter signature 200 219 1.1E-28 T 14-10-2018 Amir_6394 3c211d44be67fd88f5e0a9f5a18bd94d 446 PRINTS PR00173 Glutamate-aspartate symporter signature 53 73 1.1E-28 T 14-10-2018 Amir_6394 3c211d44be67fd88f5e0a9f5a18bd94d 446 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 1.1E-28 T 14-10-2018 Amir_6394 3c211d44be67fd88f5e0a9f5a18bd94d 446 PRINTS PR00173 Glutamate-aspartate symporter signature 227 246 1.1E-28 T 14-10-2018 Amir_6394 3c211d44be67fd88f5e0a9f5a18bd94d 446 PRINTS PR00173 Glutamate-aspartate symporter signature 301 327 1.1E-28 T 14-10-2018 Amir_6394 3c211d44be67fd88f5e0a9f5a18bd94d 446 Gene3D G3DSA:1.10.3860.10 6 419 1.3E-112 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Amir_1485 4286008a3fce18c1becc3aa30f854589 274 Gene3D G3DSA:3.40.50.720 2 230 1.6E-61 T 14-10-2018 Amir_1485 4286008a3fce18c1becc3aa30f854589 274 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 167 5.1E-24 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_1485 4286008a3fce18c1becc3aa30f854589 274 SUPERFAMILY SSF51735 4 233 1.91E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5112 ce976696026741d949082988544708be 630 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 2 524 5.9E-217 T 14-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 Amir_5112 ce976696026741d949082988544708be 630 Gene3D G3DSA:3.20.20.80 81 488 1.2E-165 T 14-10-2018 Amir_5112 ce976696026741d949082988544708be 630 SUPERFAMILY SSF51445 69 493 1.19E-105 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_5112 ce976696026741d949082988544708be 630 SMART SM00642 93 441 7.3E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_5112 ce976696026741d949082988544708be 630 PIRSF PIRSF006337 1 528 1.2E-216 T 14-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 Amir_5112 ce976696026741d949082988544708be 630 Gene3D G3DSA:1.10.10.760 420 460 1.2E-165 T 14-10-2018 Amir_5112 ce976696026741d949082988544708be 630 Pfam PF00128 Alpha amylase, catalytic domain 107 188 4.9E-12 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_5112 ce976696026741d949082988544708be 630 Gene3D G3DSA:2.60.40.10 1 77 3.0E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_5112 ce976696026741d949082988544708be 630 Pfam PF11941 Domain of unknown function (DUF3459) 479 542 3.8E-9 T 14-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) Amir_5112 ce976696026741d949082988544708be 630 SUPERFAMILY SSF81296 1 71 4.2E-13 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_2755 965bdd43016a34ee51f4fc1ff56ae81a 144 Gene3D G3DSA:3.30.450.40 2 142 4.1E-11 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_2755 965bdd43016a34ee51f4fc1ff56ae81a 144 SUPERFAMILY SSF55781 3 139 5.89E-11 T 14-10-2018 Amir_6339 6d6da9f86ced110a4b815a9e8f848038 285 SUPERFAMILY SSF53448 8 240 3.58E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_6339 6d6da9f86ced110a4b815a9e8f848038 285 Gene3D G3DSA:3.90.550.10 3 242 7.2E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_6339 6d6da9f86ced110a4b815a9e8f848038 285 Pfam PF00535 Glycosyl transferase family 2 10 191 4.5E-16 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_6588 2b40ccf80060da414bfd87960cf34569 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 72 2.9E-38 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Amir_6588 2b40ccf80060da414bfd87960cf34569 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 2 73 26.567 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Amir_6588 2b40ccf80060da414bfd87960cf34569 73 SUPERFAMILY SSF50249 4 72 3.94E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_6588 2b40ccf80060da414bfd87960cf34569 73 Pfam PF01176 Translation initiation factor 1A / IF-1 8 71 2.3E-29 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Amir_6588 2b40ccf80060da414bfd87960cf34569 73 Gene3D G3DSA:2.40.50.140 1 73 1.5E-38 T 14-10-2018 Amir_4372 277d5238fa2d9f36fea51a6b3d4b4cbc 721 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 206 6.5E-34 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Amir_4372 277d5238fa2d9f36fea51a6b3d4b4cbc 721 SUPERFAMILY SSF52096 3 306 2.06E-60 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_4372 277d5238fa2d9f36fea51a6b3d4b4cbc 721 SUPERFAMILY SSF51735 321 501 2.49E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4372 277d5238fa2d9f36fea51a6b3d4b4cbc 721 Gene3D G3DSA:3.40.50.720 320 503 1.9E-66 T 14-10-2018 Amir_4372 277d5238fa2d9f36fea51a6b3d4b4cbc 721 SUPERFAMILY SSF48179 502 643 4.34E-17 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_4372 277d5238fa2d9f36fea51a6b3d4b4cbc 721 SUPERFAMILY SSF48179 631 720 8.08E-16 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_4372 277d5238fa2d9f36fea51a6b3d4b4cbc 721 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 323 500 7.3E-61 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amir_4372 277d5238fa2d9f36fea51a6b3d4b4cbc 721 Gene3D G3DSA:1.10.1040.50 504 712 3.0E-60 T 14-10-2018 Amir_4372 277d5238fa2d9f36fea51a6b3d4b4cbc 721 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 503 603 5.7E-18 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amir_4372 277d5238fa2d9f36fea51a6b3d4b4cbc 721 Gene3D G3DSA:3.90.226.10 1 318 7.9E-109 T 14-10-2018 Amir_2428 db79d733a32fa6816923ee0a915afd81 455 SUPERFAMILY SSF56176 3 215 1.07E-70 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amir_2428 db79d733a32fa6816923ee0a915afd81 455 Pfam PF01565 FAD binding domain 39 178 1.2E-44 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Amir_2428 db79d733a32fa6816923ee0a915afd81 455 Gene3D G3DSA:3.30.70.2740 332 414 1.5E-13 T 14-10-2018 Amir_2428 db79d733a32fa6816923ee0a915afd81 455 Pfam PF02913 FAD linked oxidases, C-terminal domain 218 453 1.2E-60 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Amir_2428 db79d733a32fa6816923ee0a915afd81 455 Gene3D G3DSA:3.30.465.40 16 228 5.0E-72 T 14-10-2018 Amir_2428 db79d733a32fa6816923ee0a915afd81 455 SUPERFAMILY SSF55103 219 455 7.85E-61 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Amir_2428 db79d733a32fa6816923ee0a915afd81 455 Gene3D G3DSA:1.10.45.10 415 454 8.7E-15 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Amir_1910 da4f4e7526167580ea8197313eba22b6 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 5.4E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1910 da4f4e7526167580ea8197313eba22b6 218 SUPERFAMILY SSF52172 3 132 9.68E-28 T 14-10-2018 IPR011006 CheY-like superfamily Amir_1910 da4f4e7526167580ea8197313eba22b6 218 SUPERFAMILY SSF46894 137 208 7.14E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_1910 da4f4e7526167580ea8197313eba22b6 218 Gene3D G3DSA:3.40.50.12740 3 209 2.6E-61 T 14-10-2018 Amir_1910 da4f4e7526167580ea8197313eba22b6 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 5.0E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1910 da4f4e7526167580ea8197313eba22b6 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 5.0E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1910 da4f4e7526167580ea8197313eba22b6 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 5.0E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1910 da4f4e7526167580ea8197313eba22b6 218 Pfam PF00072 Response regulator receiver domain 5 116 1.0E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1910 da4f4e7526167580ea8197313eba22b6 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1910 da4f4e7526167580ea8197313eba22b6 218 SMART SM00448 3 116 2.3E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1910 da4f4e7526167580ea8197313eba22b6 218 SMART SM00421 148 205 1.5E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6635 560ef971be6e9fd2ff0c95adad52c006 363 Pfam PF00005 ABC transporter 21 168 1.6E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6635 560ef971be6e9fd2ff0c95adad52c006 363 Gene3D G3DSA:3.40.50.300 5 278 1.9E-57 T 14-10-2018 Amir_6635 560ef971be6e9fd2ff0c95adad52c006 363 SMART SM00382 29 225 5.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6635 560ef971be6e9fd2ff0c95adad52c006 363 SUPERFAMILY SSF52540 7 231 7.1E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6635 560ef971be6e9fd2ff0c95adad52c006 363 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_4728 f2d50da9e5a412ac34566ee9bb48e2f6 221 Pfam PF01791 DeoC/LacD family aldolase 9 206 3.5E-14 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Amir_4728 f2d50da9e5a412ac34566ee9bb48e2f6 221 Gene3D G3DSA:3.20.20.70 2 214 2.1E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_4728 f2d50da9e5a412ac34566ee9bb48e2f6 221 PIRSF PIRSF001357 1 219 8.1E-69 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Amir_4728 f2d50da9e5a412ac34566ee9bb48e2f6 221 SUPERFAMILY SSF51569 3 213 1.78E-69 T 14-10-2018 Amir_4728 f2d50da9e5a412ac34566ee9bb48e2f6 221 SMART SM01133 3 213 5.1E-80 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Amir_4728 f2d50da9e5a412ac34566ee9bb48e2f6 221 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 2 215 32.148 T 14-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 Amir_4728 f2d50da9e5a412ac34566ee9bb48e2f6 221 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 4 207 9.1E-66 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Amir_0197 c4b1707cdfd3f75b381c989ca5fc7ff5 212 SUPERFAMILY SSF48498 84 175 4.15E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_0197 c4b1707cdfd3f75b381c989ca5fc7ff5 212 SUPERFAMILY SSF46689 10 78 4.0E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0197 c4b1707cdfd3f75b381c989ca5fc7ff5 212 Gene3D G3DSA:1.10.357.10 9 190 2.8E-32 T 14-10-2018 Amir_0197 c4b1707cdfd3f75b381c989ca5fc7ff5 212 Pfam PF13305 WHG domain 91 172 5.8E-14 T 14-10-2018 IPR025996 WHG domain Amir_1928 827918672d83eda5a6d37d01442c6783 298 Gene3D G3DSA:1.10.3720.10 55 297 2.2E-49 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1928 827918672d83eda5a6d37d01442c6783 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 288 1.2E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_1928 827918672d83eda5a6d37d01442c6783 298 SUPERFAMILY SSF161098 59 285 2.62E-45 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4168 69c6d7cf88ee892dddde0226862d6de3 312 Pfam PF06675 Protein of unknown function (DUF1177) 39 309 7.4E-132 T 14-10-2018 IPR009561 Protein of unknown function DUF1177 Amir_5689 b4ef41452f1a4676719e32759b43db6b 218 PIRSF PIRSF028451 2 213 4.1E-31 T 14-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 Amir_5689 b4ef41452f1a4676719e32759b43db6b 218 Pfam PF09365 Conserved hypothetical protein (DUF2461) 10 204 3.5E-47 T 14-10-2018 IPR012808 Conserved hypothetical protein CHP02453 Amir_5689 b4ef41452f1a4676719e32759b43db6b 218 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 7 206 2.8E-35 T 14-10-2018 IPR012808 Conserved hypothetical protein CHP02453 Amir_6511 2deb84962d12183c3da9b742ba731afe 224 SUPERFAMILY SSF51261 85 217 1.62E-46 T 14-10-2018 IPR011055 Duplicated hybrid motif Amir_6511 2deb84962d12183c3da9b742ba731afe 224 Pfam PF01551 Peptidase family M23 117 209 5.1E-30 T 14-10-2018 IPR016047 Peptidase M23 Amir_6511 2deb84962d12183c3da9b742ba731afe 224 Gene3D G3DSA:2.70.70.10 61 220 7.8E-43 T 14-10-2018 IPR011055 Duplicated hybrid motif Amir_2320 70859ce974c97d0bb3c8792357eb9902 291 SUPERFAMILY SSF53335 73 260 1.56E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_2320 70859ce974c97d0bb3c8792357eb9902 291 SUPERFAMILY SSF47757 2 72 2.35E-11 T 14-10-2018 Amir_2320 70859ce974c97d0bb3c8792357eb9902 291 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 5.3E-38 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Amir_2320 70859ce974c97d0bb3c8792357eb9902 291 PRINTS PR00996 Glutamate methyltransferase family signature 66 78 5.3E-38 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Amir_2320 70859ce974c97d0bb3c8792357eb9902 291 PRINTS PR00996 Glutamate methyltransferase family signature 226 249 5.3E-38 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Amir_2320 70859ce974c97d0bb3c8792357eb9902 291 PRINTS PR00996 Glutamate methyltransferase family signature 139 155 5.3E-38 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Amir_2320 70859ce974c97d0bb3c8792357eb9902 291 PRINTS PR00996 Glutamate methyltransferase family signature 27 40 5.3E-38 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Amir_2320 70859ce974c97d0bb3c8792357eb9902 291 PRINTS PR00996 Glutamate methyltransferase family signature 207 221 5.3E-38 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Amir_2320 70859ce974c97d0bb3c8792357eb9902 291 Pfam PF01739 CheR methyltransferase, SAM binding domain 73 260 7.7E-55 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Amir_2320 70859ce974c97d0bb3c8792357eb9902 291 Gene3D G3DSA:1.10.155.10 1 71 9.0E-9 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Amir_2320 70859ce974c97d0bb3c8792357eb9902 291 Gene3D G3DSA:3.40.50.150 72 269 5.8E-54 T 14-10-2018 Amir_2320 70859ce974c97d0bb3c8792357eb9902 291 Pfam PF03705 CheR methyltransferase, all-alpha domain 7 57 2.6E-8 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Amir_2320 70859ce974c97d0bb3c8792357eb9902 291 SMART SM00138 5 268 6.7E-84 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Amir_2344 5c290b56a5e769d7049a8188605e4b41 439 SMART SM00382 156 337 2.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2344 5c290b56a5e769d7049a8188605e4b41 439 SUPERFAMILY SSF52540 91 358 9.13E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2344 5c290b56a5e769d7049a8188605e4b41 439 Gene3D G3DSA:3.40.50.12240 14 435 3.2E-137 T 14-10-2018 Amir_2344 5c290b56a5e769d7049a8188605e4b41 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 144 353 5.6E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amir_2344 5c290b56a5e769d7049a8188605e4b41 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 18 433 5.0E-160 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amir_2344 5c290b56a5e769d7049a8188605e4b41 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 344 353 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amir_0762 fca41b473bf15810eb95dc77aa7303d8 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 330 5.4E-35 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0762 fca41b473bf15810eb95dc77aa7303d8 332 SUPERFAMILY SSF161098 93 318 1.29E-15 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2500 e656fe42dff3711c99c846c201cae426 628 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 265 393 3.1E-27 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amir_2500 e656fe42dff3711c99c846c201cae426 628 Gene3D G3DSA:3.40.80.10 251 406 1.4E-41 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amir_2500 e656fe42dff3711c99c846c201cae426 628 SMART SM00644 257 392 1.0E-40 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amir_2500 e656fe42dff3711c99c846c201cae426 628 SUPERFAMILY SSF55846 243 408 4.71E-40 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amir_2500 e656fe42dff3711c99c846c201cae426 628 SUPERFAMILY SSF53955 33 96 3.94E-5 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Amir_0760 a49b7fe4c40b3cbfb17574ff61585fed 566 Gene3D G3DSA:3.90.76.10 81 187 3.1E-166 T 14-10-2018 Amir_0760 a49b7fe4c40b3cbfb17574ff61585fed 566 SUPERFAMILY SSF53850 49 552 7.42E-61 T 14-10-2018 Amir_0760 a49b7fe4c40b3cbfb17574ff61585fed 566 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 111 427 6.8E-36 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Amir_0760 a49b7fe4c40b3cbfb17574ff61585fed 566 Gene3D G3DSA:3.40.190.10 49 549 3.1E-166 T 14-10-2018 Amir_0760 a49b7fe4c40b3cbfb17574ff61585fed 566 Gene3D G3DSA:3.10.105.10 295 533 3.1E-166 T 14-10-2018 Amir_4486 005997632b6dc924901826d95cf68965 1691 Gene3D G3DSA:3.30.559.30 808 1054 2.2E-148 T 14-10-2018 Amir_4486 005997632b6dc924901826d95cf68965 1691 SUPERFAMILY SSF47336 1591 1664 2.09E-20 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4486 005997632b6dc924901826d95cf68965 1691 Gene3D G3DSA:3.40.50.12780 1083 1462 3.0E-115 T 14-10-2018 Amir_4486 005997632b6dc924901826d95cf68965 1691 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1107 1494 1.6E-114 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_4486 005997632b6dc924901826d95cf68965 1691 Gene3D G3DSA:3.40.50.1820 1588 1690 3.3E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4486 005997632b6dc924901826d95cf68965 1691 Gene3D G3DSA:3.30.300.30 1463 1587 9.9E-34 T 14-10-2018 Amir_4486 005997632b6dc924901826d95cf68965 1691 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1622 1637 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4486 005997632b6dc924901826d95cf68965 1691 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1221 1232 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4486 005997632b6dc924901826d95cf68965 1691 Pfam PF13193 AMP-binding enzyme C-terminal domain 1478 1574 1.7E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_4486 005997632b6dc924901826d95cf68965 1691 SUPERFAMILY SSF47336 536 610 6.67E-16 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4486 005997632b6dc924901826d95cf68965 1691 Pfam PF00501 AMP-binding enzyme 1087 1470 1.2E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4486 005997632b6dc924901826d95cf68965 1691 SUPERFAMILY SSF52777 36 205 1.22E-45 T 14-10-2018 Amir_4486 005997632b6dc924901826d95cf68965 1691 Gene3D G3DSA:3.30.559.10 632 998 2.2E-148 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_4486 005997632b6dc924901826d95cf68965 1691 SMART SM00823 Phosphopantetheine attachment site 543 613 0.095 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4486 005997632b6dc924901826d95cf68965 1691 SMART SM00823 Phosphopantetheine attachment site 1598 1667 2.3E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4486 005997632b6dc924901826d95cf68965 1691 Pfam PF00668 Condensation domain 33 464 5.9E-88 T 14-10-2018 IPR001242 Condensation domain Amir_4486 005997632b6dc924901826d95cf68965 1691 Pfam PF00668 Condensation domain 631 1066 2.3E-98 T 14-10-2018 IPR001242 Condensation domain Amir_4486 005997632b6dc924901826d95cf68965 1691 SUPERFAMILY SSF52777 815 1057 2.96E-60 T 14-10-2018 Amir_4486 005997632b6dc924901826d95cf68965 1691 SUPERFAMILY SSF52777 213 455 4.0E-49 T 14-10-2018 Amir_4486 005997632b6dc924901826d95cf68965 1691 Gene3D G3DSA:3.30.559.10 34 396 6.6E-132 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_4486 005997632b6dc924901826d95cf68965 1691 Gene3D G3DSA:1.10.1200.10 531 613 5.1E-22 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4486 005997632b6dc924901826d95cf68965 1691 SUPERFAMILY SSF52777 633 804 5.34E-49 T 14-10-2018 Amir_4486 005997632b6dc924901826d95cf68965 1691 Pfam PF00550 Phosphopantetheine attachment site 545 609 7.9E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4486 005997632b6dc924901826d95cf68965 1691 Pfam PF00550 Phosphopantetheine attachment site 1600 1662 1.2E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4486 005997632b6dc924901826d95cf68965 1691 SUPERFAMILY SSF56801 1047 1611 9.42E-143 T 14-10-2018 Amir_4486 005997632b6dc924901826d95cf68965 1691 Gene3D G3DSA:3.30.559.30 209 452 6.6E-132 T 14-10-2018 Amir_4207 32e5e18c21d7d0fbab267a2926e95c57 359 SUPERFAMILY SSF51905 7 353 6.15E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4207 32e5e18c21d7d0fbab267a2926e95c57 359 Pfam PF01266 FAD dependent oxidoreductase 8 347 5.7E-41 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Amir_4207 32e5e18c21d7d0fbab267a2926e95c57 359 Gene3D G3DSA:3.30.9.10 87 304 3.2E-51 T 14-10-2018 Amir_4207 32e5e18c21d7d0fbab267a2926e95c57 359 Gene3D G3DSA:3.50.50.60 9 350 3.2E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1135 a9ffb594d45884c555604359629bbb6d 127 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 53 77 - T 14-10-2018 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 Amir_1135 a9ffb594d45884c555604359629bbb6d 127 Gene3D G3DSA:1.10.490.10 3 127 9.6E-48 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Amir_1135 a9ffb594d45884c555604359629bbb6d 127 SUPERFAMILY SSF46458 7 124 1.6E-35 T 14-10-2018 IPR009050 Globin-like superfamily Amir_1135 a9ffb594d45884c555604359629bbb6d 127 Pfam PF01152 Bacterial-like globin 6 119 6.9E-35 T 14-10-2018 IPR001486 Truncated hemoglobin GO:0019825 Amir_1399 ca7cc20ae8d2503eaf0990c7771e1075 502 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 11 483 3.1E-157 T 14-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 Amir_1399 ca7cc20ae8d2503eaf0990c7771e1075 502 ProSitePatterns PS00982 Bacterial-type phytoene dehydrogenase signature. 452 472 - T 14-10-2018 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site Amir_1399 ca7cc20ae8d2503eaf0990c7771e1075 502 Pfam PF01593 Flavin containing amine oxidoreductase 18 480 1.6E-40 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Amir_1399 ca7cc20ae8d2503eaf0990c7771e1075 502 SUPERFAMILY SSF51905 10 481 9.36E-64 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1399 ca7cc20ae8d2503eaf0990c7771e1075 502 Gene3D G3DSA:3.50.50.60 191 326 6.1E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1399 ca7cc20ae8d2503eaf0990c7771e1075 502 Gene3D G3DSA:3.50.50.60 8 106 9.0E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0327 da520ae9d7dd688e041f7fa654f290cf 261 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 256 1.9E-72 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Amir_0327 da520ae9d7dd688e041f7fa654f290cf 261 Gene3D G3DSA:3.30.420.40 91 261 2.8E-52 T 14-10-2018 Amir_0327 da520ae9d7dd688e041f7fa654f290cf 261 Pfam PF03309 Type III pantothenate kinase 2 208 3.4E-62 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Amir_0327 da520ae9d7dd688e041f7fa654f290cf 261 SUPERFAMILY SSF53067 2 123 6.39E-27 T 14-10-2018 Amir_0327 da520ae9d7dd688e041f7fa654f290cf 261 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 260 33.193 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Amir_0327 da520ae9d7dd688e041f7fa654f290cf 261 SUPERFAMILY SSF53067 126 259 3.89E-34 T 14-10-2018 Amir_0327 da520ae9d7dd688e041f7fa654f290cf 261 Gene3D G3DSA:3.30.420.40 1 89 1.1E-20 T 14-10-2018 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 252 2.3E-21 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 SUPERFAMILY SSF53738 156 254 1.1E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 441 1.1E-175 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 SUPERFAMILY SSF55957 356 442 1.96E-21 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 372 438 4.1E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 Gene3D G3DSA:3.40.120.10 255 338 3.1E-64 T 14-10-2018 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 443 43.997 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 256 364 3.2E-31 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 134 3.2E-41 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 Gene3D G3DSA:3.40.120.10 172 361 3.1E-64 T 14-10-2018 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 SUPERFAMILY SSF53738 4 179 7.46E-48 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 Gene3D G3DSA:3.40.120.10 3 154 3.6E-46 T 14-10-2018 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 2.9E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 172 191 2.9E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 2.9E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 SUPERFAMILY SSF53738 256 362 5.49E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6563 7ece77012db362302e5e5bb2d5d4625f 444 Gene3D G3DSA:3.30.310.50 369 443 1.4E-24 T 14-10-2018 Amir_2650 c07a834e3ce97a66562dce54aaf4141b 266 Pfam PF01261 Xylose isomerase-like TIM barrel 29 192 6.4E-20 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Amir_2650 c07a834e3ce97a66562dce54aaf4141b 266 SUPERFAMILY SSF51658 11 263 8.9E-30 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Amir_2650 c07a834e3ce97a66562dce54aaf4141b 266 Gene3D G3DSA:3.20.20.150 1 254 2.6E-32 T 14-10-2018 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Pfam PF08990 Erythronolide synthase docking 3 27 2.7E-6 T 14-10-2018 IPR015083 Polyketide synthase, docking domain GO:0016740|GO:0048037 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2121 2238 1.4E-45 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 293 410 1.1E-41 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 198 214 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SUPERFAMILY SSF53901 30 401 1.97E-101 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Gene3D G3DSA:3.40.47.10 1865 2292 4.4E-178 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Gene3D G3DSA:1.10.1200.10 3509 3602 1.4E-33 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Gene3D G3DSA:1.10.1200.10 1762 1854 2.8E-34 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SUPERFAMILY SSF47336 1776 1891 3.4E-23 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SUPERFAMILY SSF52151 2385 2670 7.85E-64 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Pfam PF14765 Polyketide synthase dehydratase 918 1201 4.8E-45 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Pfam PF14765 Polyketide synthase dehydratase 2745 3037 4.5E-40 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SUPERFAMILY SSF51735 1211 1363 1.81E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SUPERFAMILY SSF47336 3522 3608 5.23E-23 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Gene3D G3DSA:3.40.47.10 30 467 8.0E-186 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Gene3D G3DSA:3.40.50.11460 1209 1362 5.6E-34 T 14-10-2018 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 2026 2042 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Pfam PF00550 Phosphopantetheine attachment site 1783 1847 3.0E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Pfam PF00550 Phosphopantetheine attachment site 3532 3597 1.4E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SMART SM00826 918 1098 1.4E-59 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SMART SM00826 2745 2926 1.3E-45 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Pfam PF08659 KR domain 3263 3429 1.2E-50 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Pfam PF08659 KR domain 1505 1678 8.2E-57 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SUPERFAMILY SSF55048 2512 2575 4.32E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 558 852 2.3E-112 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 2388 2680 5.5E-98 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SUPERFAMILY SSF51735 1498 1743 3.71E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SMART SM00823 Phosphopantetheine attachment site 3529 3601 5.3E-31 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SMART SM00823 Phosphopantetheine attachment site 1781 1853 3.3E-31 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Gene3D G3DSA:3.40.366.10 556 855 1.3E-146 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Gene3D G3DSA:3.40.366.10 2386 2683 2.0E-141 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SUPERFAMILY SSF55048 682 744 2.09E-11 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SUPERFAMILY SSF51735 3257 3464 5.68E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Gene3D G3DSA:3.30.70.3290 2306 2726 2.0E-141 T 14-10-2018 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Gene3D G3DSA:3.40.50.720 1482 1761 7.6E-96 T 14-10-2018 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Gene3D G3DSA:3.30.70.3290 476 899 1.3E-146 T 14-10-2018 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SUPERFAMILY SSF52151 554 848 1.33E-63 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1876 2113 5.4E-81 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 34 285 5.2E-88 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SUPERFAMILY SSF51735 3049 3219 2.99E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SMART SM01294 1782 1849 3.5E-6 T 14-10-2018 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SMART SM01294 3530 3597 1.1E-5 T 14-10-2018 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SMART SM00825 Beta-ketoacyl synthase 1878 2291 8.3E-210 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SMART SM00825 Beta-ketoacyl synthase 36 463 3.0E-214 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3556 3571 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1808 1823 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Pfam PF00698 Acyl transferase domain 558 871 3.3E-84 T 14-10-2018 IPR014043 Acyl transferase Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Pfam PF00698 Acyl transferase domain 2388 2668 5.5E-49 T 14-10-2018 IPR014043 Acyl transferase Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SUPERFAMILY SSF53901 1872 2235 1.67E-99 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 413 524 1.2E-16 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2241 2348 4.7E-14 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1504 1680 1.5E-50 T 14-10-2018 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3261 3431 1.0E-44 T 14-10-2018 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Gene3D G3DSA:3.10.129.110 2735 3039 1.7E-80 T 14-10-2018 Amir_4442 3af0c216f147e3db4e2b2000b7d00c3e 3670 Gene3D G3DSA:3.10.129.110 907 1205 5.2E-92 T 14-10-2018 Amir_6957 f48471676a9cf21cdb8411b5d42e51b0 372 Gene3D G3DSA:2.60.40.10 35 166 2.1E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_6957 f48471676a9cf21cdb8411b5d42e51b0 372 SUPERFAMILY SSF117074 33 128 5.89E-13 T 14-10-2018 Amir_6957 f48471676a9cf21cdb8411b5d42e51b0 372 Pfam PF17210 SdrD B-like domain 39 112 5.8E-9 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SUPERFAMILY SSF51735 3470 3681 2.68E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SUPERFAMILY SSF51735 1536 1708 7.89E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Pfam PF14765 Polyketide synthase dehydratase 989 1255 5.7E-58 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Pfam PF14765 Polyketide synthase dehydratase 3015 3290 3.8E-54 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SMART SM00829 1422 1737 2.6E-156 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SMART SM01294 2030 2097 6.3E-7 T 14-10-2018 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SUPERFAMILY SSF47336 3754 3837 7.07E-21 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Gene3D G3DSA:3.40.366.10 2659 2957 1.3E-147 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Gene3D G3DSA:3.40.366.10 621 925 8.7E-156 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 301 418 2.2E-40 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2379 2494 3.9E-42 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Pfam PF00698 Acyl transferase domain 623 922 4.0E-54 T 14-10-2018 IPR014043 Acyl transferase Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Pfam PF00698 Acyl transferase domain 2660 2965 4.3E-75 T 14-10-2018 IPR014043 Acyl transferase Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SUPERFAMILY SSF53901 41 415 7.15E-102 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Gene3D G3DSA:3.40.47.10 43 503 8.8E-182 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SMART SM00826 989 1148 2.5E-74 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SMART SM00826 3015 3175 4.6E-72 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Pfam PF08659 KR domain 1747 1923 7.0E-55 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Pfam PF08659 KR domain 3472 3649 3.2E-51 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Gene3D G3DSA:3.40.50.720 3293 3735 1.1E-105 T 14-10-2018 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2121 2371 1.2E-88 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 43 293 3.0E-88 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SUPERFAMILY SSF52151 619 911 7.32E-67 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Pfam PF13602 Zinc-binding dehydrogenase 1618 1737 4.4E-13 T 14-10-2018 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SUPERFAMILY SSF52151 2657 2940 9.42E-68 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SUPERFAMILY SSF55048 755 816 9.68E-13 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SUPERFAMILY SSF51735 1744 1983 3.39E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SMART SM00825 Beta-ketoacyl synthase 45 471 1.9E-210 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SMART SM00825 Beta-ketoacyl synthase 2123 2547 2.7E-213 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Gene3D G3DSA:1.10.1200.10 2011 2102 3.6E-33 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Gene3D G3DSA:1.10.1200.10 3742 3836 1.4E-30 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Gene3D G3DSA:3.40.50.720 1553 1686 2.3E-93 T 14-10-2018 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SUPERFAMILY SSF47336 2025 2136 6.81E-24 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 1564 1585 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SUPERFAMILY SSF51735 3299 3460 9.05E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1747 1925 3.4E-53 T 14-10-2018 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3472 3651 2.0E-45 T 14-10-2018 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SMART SM00823 Phosphopantetheine attachment site 3760 3832 6.1E-27 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SMART SM00823 Phosphopantetheine attachment site 2029 2101 2.2E-30 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2497 2597 8.4E-12 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 421 585 6.4E-8 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SUPERFAMILY SSF55048 2784 2843 3.79E-8 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Gene3D G3DSA:3.90.180.10 1436 1734 2.3E-93 T 14-10-2018 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 206 222 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Gene3D G3DSA:3.30.70.3290 536 970 8.7E-156 T 14-10-2018 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SUPERFAMILY SSF51735 1260 1403 8.66E-14 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Gene3D G3DSA:3.30.70.3290 2575 3000 1.3E-147 T 14-10-2018 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3787 3802 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Gene3D G3DSA:3.10.129.110 3010 3292 1.8E-98 T 14-10-2018 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Gene3D G3DSA:3.10.129.110 978 1258 1.1E-98 T 14-10-2018 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 2284 2300 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2056 2071 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Pfam PF00550 Phosphopantetheine attachment site 3762 3822 8.4E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Pfam PF00550 Phosphopantetheine attachment site 2031 2097 2.7E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 623 922 4.2E-111 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 2661 2954 2.3E-110 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Gene3D G3DSA:3.40.50.720 1735 1983 6.0E-76 T 14-10-2018 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Gene3D G3DSA:3.40.47.10 2112 2564 2.2E-182 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 Gene3D G3DSA:3.40.50.720 1259 1423 3.0E-23 T 14-10-2018 Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SUPERFAMILY SSF50129 1422 1573 1.73E-22 T 14-10-2018 IPR011032 GroES-like superfamily Amir_3292 79e7d4cba32d2ce05c82bb0931d51455 3874 SUPERFAMILY SSF53901 2117 2490 7.99E-100 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_6096 4b6c9064895285f811b1d93a46adad2a 557 Pfam PF00561 alpha/beta hydrolase fold 121 288 4.1E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_6096 4b6c9064895285f811b1d93a46adad2a 557 Pfam PF08386 TAP-like protein 433 532 8.0E-24 T 14-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal Amir_6096 4b6c9064895285f811b1d93a46adad2a 557 Gene3D G3DSA:3.40.50.1820 383 521 8.3E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6096 4b6c9064895285f811b1d93a46adad2a 557 SUPERFAMILY SSF53474 122 520 1.15E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0404 26f2a858666be43d703a4ae0e7560af8 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 6.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_0404 26f2a858666be43d703a4ae0e7560af8 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 6.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_0404 26f2a858666be43d703a4ae0e7560af8 249 Gene3D G3DSA:3.40.1410.10 81 247 1.5E-61 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Amir_0404 26f2a858666be43d703a4ae0e7560af8 249 Pfam PF07702 UTRA domain 98 238 4.3E-45 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Amir_0404 26f2a858666be43d703a4ae0e7560af8 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 31 77 5.8E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_0404 26f2a858666be43d703a4ae0e7560af8 249 SUPERFAMILY SSF46785 12 82 5.17E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0404 26f2a858666be43d703a4ae0e7560af8 249 Gene3D G3DSA:1.10.10.10 16 80 1.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0404 26f2a858666be43d703a4ae0e7560af8 249 SMART SM00345 21 78 1.3E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_0404 26f2a858666be43d703a4ae0e7560af8 249 SUPERFAMILY SSF64288 66 245 4.71E-55 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Amir_0404 26f2a858666be43d703a4ae0e7560af8 249 SMART SM00866 98 238 5.4E-46 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Amir_3501 15aeb2f9497044fa37497ad189ba9e8d 455 Pfam PF12623 RNA repair, ligase-Pnkp-associating, region of Hen1 1 229 5.6E-100 T 14-10-2018 IPR024740 Hen1, N-terminal Amir_3501 15aeb2f9497044fa37497ad189ba9e8d 455 SUPERFAMILY SSF53335 253 418 3.35E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3501 15aeb2f9497044fa37497ad189ba9e8d 455 TIGRFAM TIGR04074 bacter_Hen1: 3' terminal RNA ribose 2'-O-methyltransferase Hen1 2 449 1.1E-201 T 14-10-2018 IPR024026 3'-RNA ribose 2'-O-methyltransferase, Hen1, bacterial Amir_3501 15aeb2f9497044fa37497ad189ba9e8d 455 Gene3D G3DSA:3.40.50.150 245 454 5.7E-65 T 14-10-2018 Amir_3501 15aeb2f9497044fa37497ad189ba9e8d 455 Gene3D G3DSA:3.30.1610.20 1 218 1.3E-91 T 14-10-2018 IPR038546 Hen1, N-terminal domain superfamily Amir_3501 15aeb2f9497044fa37497ad189ba9e8d 455 Pfam PF13489 Methyltransferase domain 260 418 6.7E-12 T 14-10-2018 Amir_6030 1413ff5397cf9014a84d306054d44623 880 Pfam PF12770 CHAT domain 638 864 5.6E-28 T 14-10-2018 IPR024983 CHAT domain Amir_6030 1413ff5397cf9014a84d306054d44623 880 SUPERFAMILY SSF48452 127 307 1.1E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6030 1413ff5397cf9014a84d306054d44623 880 SMART SM00028 162 195 0.047 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_6030 1413ff5397cf9014a84d306054d44623 880 SMART SM00028 202 235 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_6030 1413ff5397cf9014a84d306054d44623 880 Gene3D G3DSA:1.25.40.10 22 326 2.0E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_1698 1bcf5e9b33c88a0b5eb1bce195143c91 766 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 67 761 3.1E-261 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 Amir_1698 1bcf5e9b33c88a0b5eb1bce195143c91 766 Gene3D G3DSA:1.10.3210.10 40 230 8.4E-78 T 14-10-2018 Amir_1698 1bcf5e9b33c88a0b5eb1bce195143c91 766 SUPERFAMILY SSF81271 416 488 4.58E-22 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Amir_1698 1bcf5e9b33c88a0b5eb1bce195143c91 766 SMART SM00471 82 192 3.6E-12 T 14-10-2018 IPR003607 HD/PDEase domain Amir_1698 1bcf5e9b33c88a0b5eb1bce195143c91 766 Gene3D G3DSA:3.30.70.260 685 765 5.4E-17 T 14-10-2018 Amir_1698 1bcf5e9b33c88a0b5eb1bce195143c91 766 Pfam PF04607 Region found in RelA / SpoT proteins 274 383 2.4E-35 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 Amir_1698 1bcf5e9b33c88a0b5eb1bce195143c91 766 SUPERFAMILY SSF109604 43 229 3.14E-70 T 14-10-2018 Amir_1698 1bcf5e9b33c88a0b5eb1bce195143c91 766 SUPERFAMILY SSF55021 685 763 1.58E-14 T 14-10-2018 Amir_1698 1bcf5e9b33c88a0b5eb1bce195143c91 766 Pfam PF02824 TGS domain 429 488 5.3E-24 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Amir_1698 1bcf5e9b33c88a0b5eb1bce195143c91 766 SUPERFAMILY SSF81301 231 406 1.28E-60 T 14-10-2018 Amir_1698 1bcf5e9b33c88a0b5eb1bce195143c91 766 Gene3D G3DSA:3.30.460.10 232 364 8.5E-44 T 14-10-2018 Amir_1698 1bcf5e9b33c88a0b5eb1bce195143c91 766 Gene3D G3DSA:3.10.20.30 422 493 4.1E-32 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Amir_1698 1bcf5e9b33c88a0b5eb1bce195143c91 766 Pfam PF13291 ACT domain 685 761 4.9E-17 T 14-10-2018 IPR002912 ACT domain Amir_1698 1bcf5e9b33c88a0b5eb1bce195143c91 766 SMART SM00954 274 384 3.2E-58 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 Amir_1698 1bcf5e9b33c88a0b5eb1bce195143c91 766 Pfam PF13328 HD domain 67 214 2.3E-47 T 14-10-2018 IPR003607 HD/PDEase domain Amir_0747 6d96542708bc6e31575cd25a67597a6f 547 SUPERFAMILY SSF161098 284 539 1.57E-39 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0747 6d96542708bc6e31575cd25a67597a6f 547 SUPERFAMILY SSF161098 36 257 7.59E-37 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0747 6d96542708bc6e31575cd25a67597a6f 547 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 261 8.2E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0747 6d96542708bc6e31575cd25a67597a6f 547 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 355 533 1.1E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0747 6d96542708bc6e31575cd25a67597a6f 547 Gene3D G3DSA:1.10.3720.10 284 542 8.8E-41 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0747 6d96542708bc6e31575cd25a67597a6f 547 Gene3D G3DSA:1.10.3720.10 27 268 2.5E-42 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1824 348656b88cc36d458f9a0bbf813cfb0f 347 ProSitePatterns PS00356 LacI-type HTH domain signature. 20 38 - T 14-10-2018 Amir_1824 348656b88cc36d458f9a0bbf813cfb0f 347 Gene3D G3DSA:3.40.50.2300 175 303 1.8E-69 T 14-10-2018 Amir_1824 348656b88cc36d458f9a0bbf813cfb0f 347 Pfam PF13377 Periplasmic binding protein-like domain 182 343 3.1E-39 T 14-10-2018 Amir_1824 348656b88cc36d458f9a0bbf813cfb0f 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 19 62 1.7E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1824 348656b88cc36d458f9a0bbf813cfb0f 347 SUPERFAMILY SSF47413 17 65 8.44E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1824 348656b88cc36d458f9a0bbf813cfb0f 347 Gene3D G3DSA:1.10.260.40 17 73 2.4E-17 T 14-10-2018 Amir_1824 348656b88cc36d458f9a0bbf813cfb0f 347 SUPERFAMILY SSF53822 75 346 4.89E-75 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_1824 348656b88cc36d458f9a0bbf813cfb0f 347 SMART SM00354 17 84 1.7E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1824 348656b88cc36d458f9a0bbf813cfb0f 347 Gene3D G3DSA:3.40.50.2300 82 335 1.8E-69 T 14-10-2018 Amir_5128 146036e262e907f34992c1351184cf42 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 31 48 9.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5128 146036e262e907f34992c1351184cf42 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 212 9.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5128 146036e262e907f34992c1351184cf42 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 105 116 9.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5128 146036e262e907f34992c1351184cf42 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 174 9.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5128 146036e262e907f34992c1351184cf42 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 231 9.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5128 146036e262e907f34992c1351184cf42 270 SUPERFAMILY SSF51735 29 261 1.18E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5128 146036e262e907f34992c1351184cf42 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 105 116 3.6E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5128 146036e262e907f34992c1351184cf42 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 193 212 3.6E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5128 146036e262e907f34992c1351184cf42 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 172 3.6E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5128 146036e262e907f34992c1351184cf42 270 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 30 226 0.0089 T 14-10-2018 Amir_5128 146036e262e907f34992c1351184cf42 270 Gene3D G3DSA:3.40.50.720 26 269 2.5E-69 T 14-10-2018 Amir_5128 146036e262e907f34992c1351184cf42 270 Pfam PF00106 short chain dehydrogenase 31 232 1.9E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1802 5e65e971bcea7b5205147eeea4a2e41b 286 SUPERFAMILY SSF46689 55 105 5.82E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_1802 5e65e971bcea7b5205147eeea4a2e41b 286 SUPERFAMILY SSF46689 3 53 2.69E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_1802 5e65e971bcea7b5205147eeea4a2e41b 286 Pfam PF06445 GyrI-like small molecule binding domain 126 283 4.7E-23 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain Amir_1802 5e65e971bcea7b5205147eeea4a2e41b 286 Gene3D G3DSA:3.20.80.10 126 286 2.9E-30 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amir_1802 5e65e971bcea7b5205147eeea4a2e41b 286 Gene3D G3DSA:1.10.10.60 56 115 1.6E-10 T 14-10-2018 Amir_1802 5e65e971bcea7b5205147eeea4a2e41b 286 Gene3D G3DSA:1.10.10.60 2 55 1.4E-9 T 14-10-2018 Amir_1802 5e65e971bcea7b5205147eeea4a2e41b 286 Pfam PF12833 Helix-turn-helix domain 25 103 4.7E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_1802 5e65e971bcea7b5205147eeea4a2e41b 286 SMART SM00342 19 102 2.9E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_1802 5e65e971bcea7b5205147eeea4a2e41b 286 SUPERFAMILY SSF55136 126 285 4.97E-20 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amir_1802 5e65e971bcea7b5205147eeea4a2e41b 286 SMART SM00871 126 284 6.7E-22 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding Amir_7046 3dc94da5b6a12786a2d6a12ae248eef6 278 SUPERFAMILY SSF47413 30 77 6.33E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_7046 3dc94da5b6a12786a2d6a12ae248eef6 278 Gene3D G3DSA:1.10.260.40 28 90 2.8E-5 T 14-10-2018 Amir_7046 3dc94da5b6a12786a2d6a12ae248eef6 278 Pfam PF13560 Helix-turn-helix domain 5 84 1.1E-18 T 14-10-2018 Amir_7046 3dc94da5b6a12786a2d6a12ae248eef6 278 Gene3D G3DSA:3.30.450.180 103 267 2.9E-7 T 14-10-2018 Amir_7046 3dc94da5b6a12786a2d6a12ae248eef6 278 SMART SM00530 9 81 1.8E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_1600 a796f5bf2af32bd8889c8c530b8de3fd 481 SMART SM00327 313 475 3.2E-8 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_1600 a796f5bf2af32bd8889c8c530b8de3fd 481 SUPERFAMILY SSF53300 316 467 3.71E-15 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_1600 a796f5bf2af32bd8889c8c530b8de3fd 481 Gene3D G3DSA:3.40.50.410 314 475 1.7E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_1600 a796f5bf2af32bd8889c8c530b8de3fd 481 SUPERFAMILY SSF53850 86 286 1.24E-13 T 14-10-2018 Amir_1600 a796f5bf2af32bd8889c8c530b8de3fd 481 Pfam PF13531 Bacterial extracellular solute-binding protein 90 264 2.1E-18 T 14-10-2018 Amir_1600 a796f5bf2af32bd8889c8c530b8de3fd 481 Pfam PF13519 von Willebrand factor type A domain 316 420 2.5E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_5020 703679972f92e466c1b26fa2c07a0813 618 SUPERFAMILY SSF52518 327 440 1.77E-5 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_5020 703679972f92e466c1b26fa2c07a0813 618 Pfam PF02779 Transketolase, pyrimidine binding domain 296 452 2.7E-31 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amir_5020 703679972f92e466c1b26fa2c07a0813 618 SMART SM00861 294 458 9.4E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amir_5020 703679972f92e466c1b26fa2c07a0813 618 Gene3D G3DSA:3.40.50.970 292 464 1.1E-53 T 14-10-2018 Amir_5020 703679972f92e466c1b26fa2c07a0813 618 Pfam PF02780 Transketolase, C-terminal domain 477 582 1.2E-19 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Amir_5020 703679972f92e466c1b26fa2c07a0813 618 SUPERFAMILY SSF52518 29 356 2.15E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_5020 703679972f92e466c1b26fa2c07a0813 618 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 28 594 35.003 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_5020 703679972f92e466c1b26fa2c07a0813 618 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 224 265 5.0E-8 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_5020 703679972f92e466c1b26fa2c07a0813 618 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 29 221 1.7E-79 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_5020 703679972f92e466c1b26fa2c07a0813 618 Gene3D G3DSA:3.40.50.920 467 603 2.2E-24 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_5020 703679972f92e466c1b26fa2c07a0813 618 SUPERFAMILY SSF52922 467 593 1.57E-21 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_5020 703679972f92e466c1b26fa2c07a0813 618 Gene3D G3DSA:3.40.50.970 24 274 8.3E-77 T 14-10-2018 Amir_5020 703679972f92e466c1b26fa2c07a0813 618 ProSitePatterns PS00801 Transketolase signature 1. 54 73 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_3616 9e9bfcdf79888f00bdeaaaf365547188 376 Gene3D G3DSA:2.40.110.10 128 222 2.9E-16 T 14-10-2018 Amir_3616 9e9bfcdf79888f00bdeaaaf365547188 376 Gene3D G3DSA:1.10.540.10 35 113 4.0E-13 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_3616 9e9bfcdf79888f00bdeaaaf365547188 376 Gene3D G3DSA:1.20.140.10 232 366 8.6E-6 T 14-10-2018 Amir_3616 9e9bfcdf79888f00bdeaaaf365547188 376 SUPERFAMILY SSF47203 242 355 4.19E-8 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_3616 9e9bfcdf79888f00bdeaaaf365547188 376 SUPERFAMILY SSF56645 38 222 1.31E-30 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_6848 35fcab3187010b87c59e117e151aa775 323 SUPERFAMILY SSF53613 9 314 4.83E-72 T 14-10-2018 IPR029056 Ribokinase-like Amir_6848 35fcab3187010b87c59e117e151aa775 323 PRINTS PR00990 Ribokinase signature 35 54 3.1E-7 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_6848 35fcab3187010b87c59e117e151aa775 323 PRINTS PR00990 Ribokinase signature 229 240 3.1E-7 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_6848 35fcab3187010b87c59e117e151aa775 323 PRINTS PR00990 Ribokinase signature 190 205 3.1E-7 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_6848 35fcab3187010b87c59e117e151aa775 323 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 9 313 7.1E-109 T 14-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 Amir_6848 35fcab3187010b87c59e117e151aa775 323 Gene3D G3DSA:3.40.1190.20 11 295 2.2E-93 T 14-10-2018 IPR029056 Ribokinase-like Amir_6848 35fcab3187010b87c59e117e151aa775 323 Pfam PF00294 pfkB family carbohydrate kinase 9 306 6.0E-51 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Amir_6848 35fcab3187010b87c59e117e151aa775 323 Gene3D G3DSA:2.20.150.10 16 111 2.2E-93 T 14-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 Amir_4164 0afb666d1fc68a1cc702e05daf668c7c 259 SUPERFAMILY SSF55781 94 250 1.96E-28 T 14-10-2018 Amir_4164 0afb666d1fc68a1cc702e05daf668c7c 259 Gene3D G3DSA:3.30.450.40 81 256 2.6E-36 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_4164 0afb666d1fc68a1cc702e05daf668c7c 259 SMART SM00346 15 105 1.4E-15 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_4164 0afb666d1fc68a1cc702e05daf668c7c 259 Pfam PF01614 Bacterial transcriptional regulator 134 250 5.7E-7 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Amir_4164 0afb666d1fc68a1cc702e05daf668c7c 259 Gene3D G3DSA:1.10.10.10 2 76 3.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4164 0afb666d1fc68a1cc702e05daf668c7c 259 Pfam PF09339 IclR helix-turn-helix domain 17 66 1.3E-12 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_4164 0afb666d1fc68a1cc702e05daf668c7c 259 SUPERFAMILY SSF46785 15 85 1.5E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SUPERFAMILY SSF52777 2819 3017 7.45E-31 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2371 2382 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1275 1286 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SUPERFAMILY SSF47336 593 663 5.76E-14 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SMART SM00823 Phosphopantetheine attachment site 1636 1705 0.0025 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SMART SM00823 Phosphopantetheine attachment site 597 666 0.025 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SMART SM00823 Phosphopantetheine attachment site 2739 2810 0.0016 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SUPERFAMILY SSF56801 1127 1649 1.44E-127 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:1.10.1200.10 2733 2806 1.4E-20 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:3.30.559.10 3274 3623 2.5E-102 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SUPERFAMILY SSF47336 2734 2804 4.45E-13 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:3.40.50.1820 1627 1730 3.2E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SUPERFAMILY SSF56801 31 524 1.31E-126 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:3.30.559.10 675 859 8.1E-44 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 ProSitePatterns PS00012 Phosphopantetheine attachment site. 621 636 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Pfam PF13193 AMP-binding enzyme C-terminal domain 2632 2710 3.3E-10 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Pfam PF13193 AMP-binding enzyme C-terminal domain 1539 1607 4.6E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 515 4.7E-6 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1660 1675 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:3.30.559.30 1961 2214 2.0E-99 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:3.30.559.30 3441 3671 2.5E-102 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:1.10.1200.10 586 668 4.1E-19 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:3.30.559.30 2988 3235 5.5E-42 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1155 1555 5.9E-117 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2258 2648 1.1E-118 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 45 464 1.1E-114 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2766 2781 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:3.30.559.10 1791 2147 2.0E-99 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SUPERFAMILY SSF52777 680 874 9.12E-37 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SUPERFAMILY SSF52777 3004 3232 2.45E-31 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Pfam PF00501 AMP-binding enzyme 1134 1531 6.2E-79 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Pfam PF00501 AMP-binding enzyme 33 440 8.4E-89 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Pfam PF00501 AMP-binding enzyme 2239 2623 1.3E-87 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SUPERFAMILY SSF52777 1965 2201 2.11E-44 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SUPERFAMILY SSF52777 1783 1976 3.45E-38 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Pfam PF00550 Phosphopantetheine attachment site 599 662 2.4E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Pfam PF00550 Phosphopantetheine attachment site 2741 2804 1.1E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Pfam PF00550 Phosphopantetheine attachment site 1641 1698 3.0E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:3.30.559.10 2816 2985 1.3E-33 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:3.30.559.30 862 1109 7.3E-55 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:3.40.50.12780 2225 2618 9.8E-124 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:3.40.50.12780 1124 1524 1.4E-117 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SUPERFAMILY SSF52777 3441 3672 1.45E-44 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SUPERFAMILY SSF56801 2196 2752 1.83E-142 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SUPERFAMILY SSF52777 3267 3455 2.33E-39 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:3.30.300.30 2619 2723 1.1E-26 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:3.30.300.30 1525 1621 7.0E-26 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:3.30.300.30 435 534 1.0E-22 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Gene3D G3DSA:3.40.50.12780 21 432 5.1E-115 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SUPERFAMILY SSF47336 1630 1699 9.29E-16 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 SUPERFAMILY SSF52777 863 1106 4.39E-48 T 14-10-2018 Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Pfam PF00668 Condensation domain 1787 2218 1.5E-61 T 14-10-2018 IPR001242 Condensation domain Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Pfam PF00668 Condensation domain 2825 3147 2.2E-37 T 14-10-2018 IPR001242 Condensation domain Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Pfam PF00668 Condensation domain 683 1109 2.4E-64 T 14-10-2018 IPR001242 Condensation domain Amir_4589 0403b41e88541c4ffa39cc71a8b3d652 3681 Pfam PF00668 Condensation domain 3269 3671 3.7E-66 T 14-10-2018 IPR001242 Condensation domain Amir_6318 37d00f258ccb30f13a3fb87911f7816a 196 SUPERFAMILY SSF55729 9 175 4.95E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_6318 37d00f258ccb30f13a3fb87911f7816a 196 Pfam PF13302 Acetyltransferase (GNAT) domain 17 154 5.3E-11 T 14-10-2018 IPR000182 GNAT domain Amir_6318 37d00f258ccb30f13a3fb87911f7816a 196 Gene3D G3DSA:3.40.630.30 9 186 4.1E-27 T 14-10-2018 Amir_6417 ab328685caecaea390b5a4a5141158f4 328 Pfam PF03308 ArgK protein 22 289 1.2E-110 T 14-10-2018 Amir_6417 ab328685caecaea390b5a4a5141158f4 328 Gene3D G3DSA:1.10.287.130 263 328 4.5E-17 T 14-10-2018 Amir_6417 ab328685caecaea390b5a4a5141158f4 328 Gene3D G3DSA:1.20.5.170 6 50 1.0E-18 T 14-10-2018 Amir_6417 ab328685caecaea390b5a4a5141158f4 328 SUPERFAMILY SSF52540 4 325 1.29E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6417 ab328685caecaea390b5a4a5141158f4 328 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 17 323 3.6E-111 T 14-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amir_6417 ab328685caecaea390b5a4a5141158f4 328 Gene3D G3DSA:3.40.50.300 51 261 7.9E-80 T 14-10-2018 Amir_4294 f1098f00467bd2c02335659df18e6da2 364 Pfam PF01032 FecCD transport family 50 356 1.5E-74 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_4294 f1098f00467bd2c02335659df18e6da2 364 Gene3D G3DSA:1.10.3470.10 36 362 6.0E-82 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_4294 f1098f00467bd2c02335659df18e6da2 364 SUPERFAMILY SSF81345 33 356 4.58E-67 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_1191 5d70e96a419f14cd341c21b0f0738e2b 426 Gene3D G3DSA:1.20.1250.20 17 426 5.7E-63 T 14-10-2018 Amir_1191 5d70e96a419f14cd341c21b0f0738e2b 426 ProSitePatterns PS00216 Sugar transport proteins signature 1. 299 316 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Amir_1191 5d70e96a419f14cd341c21b0f0738e2b 426 SUPERFAMILY SSF103473 18 418 1.11E-63 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_1191 5d70e96a419f14cd341c21b0f0738e2b 426 Pfam PF07690 Major Facilitator Superfamily 30 385 9.0E-31 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_0650 6aa4447fdbdb07bc50c2a27dbac74bc3 590 Pfam PF00005 ABC transporter 20 155 2.2E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0650 6aa4447fdbdb07bc50c2a27dbac74bc3 590 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0650 6aa4447fdbdb07bc50c2a27dbac74bc3 590 Pfam PF00005 ABC transporter 303 437 4.6E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0650 6aa4447fdbdb07bc50c2a27dbac74bc3 590 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0650 6aa4447fdbdb07bc50c2a27dbac74bc3 590 Gene3D G3DSA:3.40.50.300 263 515 2.1E-61 T 14-10-2018 Amir_0650 6aa4447fdbdb07bc50c2a27dbac74bc3 590 Gene3D G3DSA:3.40.50.300 1 236 3.9E-59 T 14-10-2018 Amir_0650 6aa4447fdbdb07bc50c2a27dbac74bc3 590 SUPERFAMILY SSF52540 4 204 7.59E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0650 6aa4447fdbdb07bc50c2a27dbac74bc3 590 SUPERFAMILY SSF52540 271 498 1.41E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0650 6aa4447fdbdb07bc50c2a27dbac74bc3 590 SMART SM00382 311 481 4.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0650 6aa4447fdbdb07bc50c2a27dbac74bc3 590 SMART SM00382 29 207 5.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2036 9f478ead01fcec7ae3552871e85b2a22 388 Gene3D G3DSA:3.30.9.50 41 262 1.9E-67 T 14-10-2018 Amir_2036 9f478ead01fcec7ae3552871e85b2a22 388 Pfam PF01494 FAD binding domain 7 308 3.8E-16 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_2036 9f478ead01fcec7ae3552871e85b2a22 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.2E-12 T 14-10-2018 Amir_2036 9f478ead01fcec7ae3552871e85b2a22 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 1.2E-12 T 14-10-2018 Amir_2036 9f478ead01fcec7ae3552871e85b2a22 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 272 287 1.2E-12 T 14-10-2018 Amir_2036 9f478ead01fcec7ae3552871e85b2a22 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 303 1.2E-12 T 14-10-2018 Amir_2036 9f478ead01fcec7ae3552871e85b2a22 388 SUPERFAMILY SSF51905 5 364 2.76E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2036 9f478ead01fcec7ae3552871e85b2a22 388 Gene3D G3DSA:3.50.50.60 8 332 1.9E-67 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0047 d735b1d3a267b9a266022babd0b3f030 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 9.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0047 d735b1d3a267b9a266022babd0b3f030 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 9.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0047 d735b1d3a267b9a266022babd0b3f030 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 9.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0047 d735b1d3a267b9a266022babd0b3f030 250 Pfam PF00106 short chain dehydrogenase 7 199 6.4E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0047 d735b1d3a267b9a266022babd0b3f030 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 0.0071 T 14-10-2018 Amir_0047 d735b1d3a267b9a266022babd0b3f030 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 5.7E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0047 d735b1d3a267b9a266022babd0b3f030 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.7E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0047 d735b1d3a267b9a266022babd0b3f030 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.7E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0047 d735b1d3a267b9a266022babd0b3f030 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.7E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0047 d735b1d3a267b9a266022babd0b3f030 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.7E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0047 d735b1d3a267b9a266022babd0b3f030 250 SUPERFAMILY SSF51735 6 246 3.14E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0047 d735b1d3a267b9a266022babd0b3f030 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_0047 d735b1d3a267b9a266022babd0b3f030 250 Gene3D G3DSA:3.40.50.720 1 249 2.0E-67 T 14-10-2018 Amir_6883 f795469f93a96ed74cdc9c5e32d0f834 295 Gene3D G3DSA:3.30.470.20 94 238 7.4E-59 T 14-10-2018 Amir_6883 f795469f93a96ed74cdc9c5e32d0f834 295 Gene3D G3DSA:3.30.200.20 1 93 4.2E-30 T 14-10-2018 Amir_6883 f795469f93a96ed74cdc9c5e32d0f834 295 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 10 286 2.9E-73 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 Amir_6883 f795469f93a96ed74cdc9c5e32d0f834 295 Pfam PF01259 SAICAR synthetase 10 259 1.1E-100 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amir_6883 f795469f93a96ed74cdc9c5e32d0f834 295 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 7 286 24.282 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amir_6883 f795469f93a96ed74cdc9c5e32d0f834 295 SUPERFAMILY SSF56104 5 289 2.52E-98 T 14-10-2018 Amir_6883 f795469f93a96ed74cdc9c5e32d0f834 295 ProSitePatterns PS01058 SAICAR synthetase signature 2. 194 202 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 Gene3D G3DSA:3.40.50.300 226 319 3.4E-5 T 14-10-2018 Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 SUPERFAMILY SSF54980 653 732 6.23E-19 T 14-10-2018 IPR035647 EF-G domain III/V-like Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 SMART SM00889 530 648 9.8E-54 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 SMART SM00838 650 737 1.4E-17 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 Pfam PF00009 Elongation factor Tu GTP binding domain 22 322 1.5E-33 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 Pfam PF03764 Elongation factor G, domain IV 530 644 2.3E-38 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 23 154 6.7E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 Pfam PF00679 Elongation factor G C-terminus 650 731 4.4E-19 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 Gene3D G3DSA:2.40.30.10 345 455 3.0E-25 T 14-10-2018 Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 SUPERFAMILY SSF52540 19 323 3.43E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 Gene3D G3DSA:3.30.230.10 534 732 3.4E-72 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 SUPERFAMILY SSF50447 290 450 1.62E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 Gene3D G3DSA:3.30.70.240 654 726 3.4E-72 T 14-10-2018 Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 Gene3D G3DSA:3.40.50.300 24 115 2.7E-41 T 14-10-2018 Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 Gene3D G3DSA:3.30.70.870 456 528 5.0E-17 T 14-10-2018 Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 SUPERFAMILY SSF54980 455 531 1.4E-14 T 14-10-2018 IPR035647 EF-G domain III/V-like Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 Pfam PF03144 Elongation factor Tu domain 2 365 441 1.4E-7 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 SUPERFAMILY SSF54211 530 644 4.05E-34 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 Gene3D G3DSA:3.40.50.300 31 178 2.7E-41 T 14-10-2018 Amir_2107 d4c26de0b5b6747cb6b8cec78328ad64 741 Pfam PF14492 Elongation Factor G, domain II 455 525 6.6E-20 T 14-10-2018 Amir_0283 74f4f3de6b0173fbe80552f7a8ec572c 807 Pfam PF09369 Domain of unknown function (DUF1998) 662 741 4.0E-18 T 14-10-2018 IPR018973 DEAD/DEAH-box helicase, putative Amir_0283 74f4f3de6b0173fbe80552f7a8ec572c 807 Gene3D G3DSA:3.40.50.300 28 242 5.6E-36 T 14-10-2018 Amir_0283 74f4f3de6b0173fbe80552f7a8ec572c 807 SMART SM00490 316 397 2.0E-14 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_0283 74f4f3de6b0173fbe80552f7a8ec572c 807 Pfam PF00270 DEAD/DEAH box helicase 62 227 7.6E-22 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amir_0283 74f4f3de6b0173fbe80552f7a8ec572c 807 TIGRFAM TIGR03817 DECH_helic: helicase/secretion neighborhood putative DEAH-box helicase 23 768 0.0 T 14-10-2018 IPR022307 DEAD/DEAH-box helicase, putative, actinobacteria Amir_0283 74f4f3de6b0173fbe80552f7a8ec572c 807 Gene3D G3DSA:3.40.50.300 276 425 1.2E-16 T 14-10-2018 Amir_0283 74f4f3de6b0173fbe80552f7a8ec572c 807 SMART SM00487 55 256 3.5E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_0283 74f4f3de6b0173fbe80552f7a8ec572c 807 SUPERFAMILY SSF52540 69 406 1.26E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0283 74f4f3de6b0173fbe80552f7a8ec572c 807 Pfam PF00271 Helicase conserved C-terminal domain 289 397 9.7E-10 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 Gene3D G3DSA:3.30.230.70 261 577 4.8E-102 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 SMART SM00322 579 644 1.3E-10 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 SUPERFAMILY SSF46915 266 345 4.71E-19 T 14-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 Gene3D G3DSA:3.30.230.70 4 250 5.4E-88 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 18 719 2.1E-266 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 269 343 7.5E-20 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 SUPERFAMILY SSF55666 153 259 2.45E-26 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 Gene3D G3DSA:2.40.50.140 578 702 3.5E-46 T 14-10-2018 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 SMART SM00316 649 720 3.5E-17 T 14-10-2018 IPR022967 RNA-binding domain, S1 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 Pfam PF00575 S1 RNA binding domain 648 717 2.6E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 TIGRFAM TIGR02696 pppGpp_PNP: guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase 5 718 0.0 T 14-10-2018 IPR014069 Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase GO:0004654|GO:0005737|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 SUPERFAMILY SSF55666 474 573 5.07E-23 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 SUPERFAMILY SSF54791 582 668 2.82E-17 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 PIRSF PIRSF005499 8 747 5.0E-286 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 SUPERFAMILY SSF50249 647 717 1.72E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 SUPERFAMILY SSF54211 319 515 2.08E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 10 723 27.066 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 SUPERFAMILY SSF54211 10 152 2.02E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 Pfam PF00013 KH domain 583 639 5.9E-10 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 Pfam PF01138 3' exoribonuclease family, domain 1 348 480 5.7E-14 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amir_5823 864a9d9cf76eae3bef1b28e6c9df7038 747 Pfam PF01138 3' exoribonuclease family, domain 1 21 152 1.1E-17 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amir_4720 09cdf1e78630e8cf9022b79dbe339276 223 SUPERFAMILY SSF46785 15 82 2.14E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4720 09cdf1e78630e8cf9022b79dbe339276 223 SUPERFAMILY SSF48008 84 217 1.62E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_4720 09cdf1e78630e8cf9022b79dbe339276 223 SMART SM00345 20 78 1.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_4720 09cdf1e78630e8cf9022b79dbe339276 223 Gene3D G3DSA:1.10.10.10 13 79 2.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4720 09cdf1e78630e8cf9022b79dbe339276 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 78 2.9E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_4720 09cdf1e78630e8cf9022b79dbe339276 223 SMART SM00895 88 212 9.5E-10 T 14-10-2018 IPR011711 GntR, C-terminal Amir_4720 09cdf1e78630e8cf9022b79dbe339276 223 Pfam PF07729 FCD domain 88 210 1.2E-18 T 14-10-2018 IPR011711 GntR, C-terminal Amir_4720 09cdf1e78630e8cf9022b79dbe339276 223 Gene3D G3DSA:1.20.120.530 81 214 6.6E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 Pfam PF00140 Sigma-70 factor, region 1.2 133 166 3.7E-16 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 Pfam PF04542 Sigma-70 region 2 202 271 1.5E-22 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 Pfam PF04539 Sigma-70 region 3 281 356 1.4E-28 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 226 239 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 SUPERFAMILY SSF88659 275 348 1.55E-22 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 Gene3D G3DSA:1.10.10.10 275 350 2.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 SUPERFAMILY SSF88659 334 434 2.51E-26 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 198 434 8.5E-114 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 14 435 33.222 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 PRINTS PR00046 Major sigma-70 factor signature 226 239 2.0E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 PRINTS PR00046 Major sigma-70 factor signature 410 421 2.0E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 PRINTS PR00046 Major sigma-70 factor signature 374 386 2.0E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 PRINTS PR00046 Major sigma-70 factor signature 250 258 2.0E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 PRINTS PR00046 Major sigma-70 factor signature 395 410 2.0E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 Gene3D G3DSA:1.10.10.10 358 435 2.7E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 SUPERFAMILY SSF88946 130 272 1.05E-54 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 395 421 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 Pfam PF04545 Sigma-70, region 4 370 423 1.3E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 Gene3D G3DSA:1.10.601.10 167 274 1.2E-52 T 14-10-2018 Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 Gene3D G3DSA:1.10.601.10 131 166 3.3E-9 T 14-10-2018 Amir_1509 5b9bc47c096c52e1addf607128a91e54 435 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 198 423 1.4E-35 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_2621 df59f3e7c14383264e39d98b80b4f9e3 320 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 2 309 3.8E-80 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain Amir_2621 df59f3e7c14383264e39d98b80b4f9e3 320 SUPERFAMILY SSF53590 1 317 9.94E-89 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like Amir_2621 df59f3e7c14383264e39d98b80b4f9e3 320 Gene3D G3DSA:3.90.245.10 1 318 2.8E-97 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like Amir_5771 3c0923ce9ff73eb60453e43e0d49b56b 527 Gene3D G3DSA:3.40.1190.10 137 366 9.0E-79 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amir_5771 3c0923ce9ff73eb60453e43e0d49b56b 527 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 58 519 5.5E-139 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Amir_5771 3c0923ce9ff73eb60453e43e0d49b56b 527 SUPERFAMILY SSF53244 365 524 5.49E-42 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amir_5771 3c0923ce9ff73eb60453e43e0d49b56b 527 SUPERFAMILY SSF53623 137 363 5.89E-64 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amir_5771 3c0923ce9ff73eb60453e43e0d49b56b 527 SUPERFAMILY SSF63418 51 135 3.14E-19 T 14-10-2018 IPR035911 MurE/MurF, N-terminal Amir_5771 3c0923ce9ff73eb60453e43e0d49b56b 527 Gene3D G3DSA:3.40.1390.10 34 136 7.2E-31 T 14-10-2018 Amir_5771 3c0923ce9ff73eb60453e43e0d49b56b 527 Pfam PF08245 Mur ligase middle domain 146 345 9.6E-42 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Amir_5771 3c0923ce9ff73eb60453e43e0d49b56b 527 Pfam PF01225 Mur ligase family, catalytic domain 58 134 8.4E-11 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Amir_5771 3c0923ce9ff73eb60453e43e0d49b56b 527 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 35 522 31.004 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Amir_5771 3c0923ce9ff73eb60453e43e0d49b56b 527 Gene3D G3DSA:3.90.190.20 367 526 5.4E-50 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amir_5771 3c0923ce9ff73eb60453e43e0d49b56b 527 Pfam PF02875 Mur ligase family, glutamate ligase domain 365 450 7.8E-19 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Amir_6453 86a5ad48e95fe15c311d8d0ccc533064 514 SMART SM00382 32 217 2.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6453 86a5ad48e95fe15c311d8d0ccc533064 514 Gene3D G3DSA:3.40.50.300 5 238 1.9E-52 T 14-10-2018 Amir_6453 86a5ad48e95fe15c311d8d0ccc533064 514 SUPERFAMILY SSF52540 256 489 7.48E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6453 86a5ad48e95fe15c311d8d0ccc533064 514 Pfam PF00005 ABC transporter 25 169 1.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6453 86a5ad48e95fe15c311d8d0ccc533064 514 SUPERFAMILY SSF52540 7 226 3.01E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6453 86a5ad48e95fe15c311d8d0ccc533064 514 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_6453 86a5ad48e95fe15c311d8d0ccc533064 514 Pfam PF00005 ABC transporter 274 430 1.2E-13 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6453 86a5ad48e95fe15c311d8d0ccc533064 514 Gene3D G3DSA:3.40.50.300 244 499 4.5E-37 T 14-10-2018 Amir_7025 62596c115811701562159c45e53e6f9d 229 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_7025 62596c115811701562159c45e53e6f9d 229 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 177 0.0034 T 14-10-2018 Amir_7025 62596c115811701562159c45e53e6f9d 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 9.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7025 62596c115811701562159c45e53e6f9d 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 9.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7025 62596c115811701562159c45e53e6f9d 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 9.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7025 62596c115811701562159c45e53e6f9d 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 9.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7025 62596c115811701562159c45e53e6f9d 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 9.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7025 62596c115811701562159c45e53e6f9d 229 Pfam PF00106 short chain dehydrogenase 6 186 4.1E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7025 62596c115811701562159c45e53e6f9d 229 Gene3D G3DSA:3.40.50.720 3 228 2.2E-57 T 14-10-2018 Amir_7025 62596c115811701562159c45e53e6f9d 229 SUPERFAMILY SSF51735 6 218 9.18E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3923 80ee9de3b069c7154db6c7f90850c521 726 Gene3D G3DSA:1.20.910.10 527 696 6.4E-11 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Amir_3923 80ee9de3b069c7154db6c7f90850c521 726 SMART SM01236 547 656 3.4E-33 T 14-10-2018 Amir_3923 80ee9de3b069c7154db6c7f90850c521 726 Pfam PF14518 Iron-containing redox enzyme 540 699 3.4E-19 T 14-10-2018 Amir_0612 829956b13b72406c65d1300c0a6a0702 228 Pfam PF00072 Response regulator receiver domain 3 112 5.8E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0612 829956b13b72406c65d1300c0a6a0702 228 SMART SM00862 148 223 2.9E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_0612 829956b13b72406c65d1300c0a6a0702 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 223 2.9E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_0612 829956b13b72406c65d1300c0a6a0702 228 SUPERFAMILY SSF46894 128 224 1.33E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_0612 829956b13b72406c65d1300c0a6a0702 228 Gene3D G3DSA:1.10.10.10 127 227 4.4E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0612 829956b13b72406c65d1300c0a6a0702 228 SUPERFAMILY SSF52172 1 124 2.42E-44 T 14-10-2018 IPR011006 CheY-like superfamily Amir_0612 829956b13b72406c65d1300c0a6a0702 228 Gene3D G3DSA:3.40.50.2300 1 126 9.5E-42 T 14-10-2018 Amir_0612 829956b13b72406c65d1300c0a6a0702 228 SMART SM00448 1 112 6.0E-47 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5304 0ec0d90bf65587a8bad6a8cc364d47e3 1153 SUPERFAMILY SSF53098 340 500 2.13E-5 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_5304 0ec0d90bf65587a8bad6a8cc364d47e3 1153 Pfam PF13604 AAA domain 758 913 8.8E-13 T 14-10-2018 Amir_5304 0ec0d90bf65587a8bad6a8cc364d47e3 1153 Gene3D G3DSA:3.40.50.300 946 1128 1.3E-30 T 14-10-2018 Amir_5304 0ec0d90bf65587a8bad6a8cc364d47e3 1153 TIGRFAM TIGR03491 TIGR03491: putative RecB family nuclease, TM0106 family 14 500 7.1E-60 T 14-10-2018 IPR019993 RecB family nuclease, TM0106, putative Amir_5304 0ec0d90bf65587a8bad6a8cc364d47e3 1153 Gene3D G3DSA:3.40.50.300 749 925 5.0E-28 T 14-10-2018 Amir_5304 0ec0d90bf65587a8bad6a8cc364d47e3 1153 SMART SM00382 756 938 1.9E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5304 0ec0d90bf65587a8bad6a8cc364d47e3 1153 Pfam PF13087 AAA domain 940 1112 3.9E-21 T 14-10-2018 Amir_5304 0ec0d90bf65587a8bad6a8cc364d47e3 1153 SUPERFAMILY SSF52540 751 1117 1.03E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5304 0ec0d90bf65587a8bad6a8cc364d47e3 1153 Pfam PF13482 RNase_H superfamily 317 499 2.7E-20 T 14-10-2018 IPR038720 YprB, ribonuclease H-like domain Amir_5160 399eae80695aa4795c07a85adfd196ba 800 Pfam PF13579 Glycosyl transferase 4-like domain 428 594 1.6E-19 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amir_5160 399eae80695aa4795c07a85adfd196ba 800 Pfam PF00534 Glycosyl transferases group 1 602 762 2.3E-32 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Amir_5160 399eae80695aa4795c07a85adfd196ba 800 Gene3D G3DSA:3.40.50.2000 410 612 1.6E-32 T 14-10-2018 Amir_5160 399eae80695aa4795c07a85adfd196ba 800 Gene3D G3DSA:3.40.50.2000 613 769 1.0E-41 T 14-10-2018 Amir_5160 399eae80695aa4795c07a85adfd196ba 800 SUPERFAMILY SSF53756 414 788 1.82E-81 T 14-10-2018 Amir_2051 233440533c4e1e1c7d85682f0571b35c 370 SUPERFAMILY SSF54631 254 360 5.12E-5 T 14-10-2018 Amir_2051 233440533c4e1e1c7d85682f0571b35c 370 Gene3D G3DSA:3.40.50.300 4 287 6.0E-77 T 14-10-2018 Amir_2051 233440533c4e1e1c7d85682f0571b35c 370 SMART SM00382 31 227 1.5E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2051 233440533c4e1e1c7d85682f0571b35c 370 SUPERFAMILY SSF52540 5 244 1.56E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2051 233440533c4e1e1c7d85682f0571b35c 370 Pfam PF00005 ABC transporter 23 168 1.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2051 233440533c4e1e1c7d85682f0571b35c 370 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3737 a06c88c094ae81ca90723be3ef38d94e 742 Pfam PF13176 Tetratricopeptide repeat 529 562 0.0013 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_3737 a06c88c094ae81ca90723be3ef38d94e 742 Gene3D G3DSA:3.40.50.300 60 231 3.3E-25 T 14-10-2018 Amir_3737 a06c88c094ae81ca90723be3ef38d94e 742 Pfam PF00931 NB-ARC domain 108 282 2.4E-6 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 Amir_3737 a06c88c094ae81ca90723be3ef38d94e 742 Pfam PF13424 Tetratricopeptide repeat 646 717 2.4E-10 T 14-10-2018 Amir_3737 a06c88c094ae81ca90723be3ef38d94e 742 SUPERFAMILY SSF52540 68 341 3.13E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3737 a06c88c094ae81ca90723be3ef38d94e 742 SMART SM00028 566 599 40.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_3737 a06c88c094ae81ca90723be3ef38d94e 742 SMART SM00028 686 719 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_3737 a06c88c094ae81ca90723be3ef38d94e 742 SMART SM00028 606 639 18.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_3737 a06c88c094ae81ca90723be3ef38d94e 742 SMART SM00028 646 679 0.0092 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_3737 a06c88c094ae81ca90723be3ef38d94e 742 SMART SM00028 526 559 0.18 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_3737 a06c88c094ae81ca90723be3ef38d94e 742 PRINTS PR00364 Disease resistance protein signature 273 287 3.6E-8 T 14-10-2018 Amir_3737 a06c88c094ae81ca90723be3ef38d94e 742 PRINTS PR00364 Disease resistance protein signature 185 199 3.6E-8 T 14-10-2018 Amir_3737 a06c88c094ae81ca90723be3ef38d94e 742 PRINTS PR00364 Disease resistance protein signature 106 121 3.6E-8 T 14-10-2018 Amir_3737 a06c88c094ae81ca90723be3ef38d94e 742 Gene3D G3DSA:1.25.40.10 624 739 2.2E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3737 a06c88c094ae81ca90723be3ef38d94e 742 Gene3D G3DSA:1.25.40.10 448 623 1.4E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3737 a06c88c094ae81ca90723be3ef38d94e 742 SUPERFAMILY SSF48452 507 716 8.35E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0366 0fe3818cfde269b3c3f5153edce11092 462 TIGRFAM TIGR00416 sms: DNA repair protein RadA 8 430 3.6E-152 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Amir_0366 0fe3818cfde269b3c3f5153edce11092 462 SMART SM00382 88 242 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0366 0fe3818cfde269b3c3f5153edce11092 462 PRINTS PR01874 DNA repair protein radA signature 211 239 1.5E-82 T 14-10-2018 Amir_0366 0fe3818cfde269b3c3f5153edce11092 462 PRINTS PR01874 DNA repair protein radA signature 246 272 1.5E-82 T 14-10-2018 Amir_0366 0fe3818cfde269b3c3f5153edce11092 462 PRINTS PR01874 DNA repair protein radA signature 172 196 1.5E-82 T 14-10-2018 Amir_0366 0fe3818cfde269b3c3f5153edce11092 462 PRINTS PR01874 DNA repair protein radA signature 320 343 1.5E-82 T 14-10-2018 Amir_0366 0fe3818cfde269b3c3f5153edce11092 462 PRINTS PR01874 DNA repair protein radA signature 14 38 1.5E-82 T 14-10-2018 Amir_0366 0fe3818cfde269b3c3f5153edce11092 462 PRINTS PR01874 DNA repair protein radA signature 80 108 1.5E-82 T 14-10-2018 Amir_0366 0fe3818cfde269b3c3f5153edce11092 462 PRINTS PR01874 DNA repair protein radA signature 122 139 1.5E-82 T 14-10-2018 Amir_0366 0fe3818cfde269b3c3f5153edce11092 462 Gene3D G3DSA:3.40.50.300 66 277 6.7E-39 T 14-10-2018 Amir_0366 0fe3818cfde269b3c3f5153edce11092 462 Hamap MF_01498 DNA repair protein RadA [radA]. 25 451 42.625 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Amir_0366 0fe3818cfde269b3c3f5153edce11092 462 SUPERFAMILY SSF54211 253 449 2.16E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_0366 0fe3818cfde269b3c3f5153edce11092 462 Pfam PF13541 Subunit ChlI of Mg-chelatase 367 426 5.0E-8 T 14-10-2018 Amir_0366 0fe3818cfde269b3c3f5153edce11092 462 Gene3D G3DSA:3.30.230.10 328 429 1.1E-11 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amir_0366 0fe3818cfde269b3c3f5153edce11092 462 SUPERFAMILY SSF52540 72 289 1.84E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0366 0fe3818cfde269b3c3f5153edce11092 462 Pfam PF13481 AAA domain 81 220 5.6E-13 T 14-10-2018 Amir_5863 9c303eb59232e7b025cb4d8a8f9e32cf 222 SUPERFAMILY SSF48498 88 172 4.71E-12 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_5863 9c303eb59232e7b025cb4d8a8f9e32cf 222 Pfam PF13305 WHG domain 92 170 1.5E-13 T 14-10-2018 IPR025996 WHG domain Amir_5863 9c303eb59232e7b025cb4d8a8f9e32cf 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 7.9E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5863 9c303eb59232e7b025cb4d8a8f9e32cf 222 Gene3D G3DSA:1.10.357.10 2 197 1.5E-55 T 14-10-2018 Amir_5863 9c303eb59232e7b025cb4d8a8f9e32cf 222 SUPERFAMILY SSF46689 6 78 2.24E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_7020 819a04f403125ac146617d68a2aa04aa 306 SMART SM00382 26 204 2.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_7020 819a04f403125ac146617d68a2aa04aa 306 SUPERFAMILY SSF52540 2 221 1.48E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_7020 819a04f403125ac146617d68a2aa04aa 306 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_7020 819a04f403125ac146617d68a2aa04aa 306 Pfam PF00005 ABC transporter 18 156 7.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_7020 819a04f403125ac146617d68a2aa04aa 306 Gene3D G3DSA:3.40.50.300 1 227 4.9E-55 T 14-10-2018 Amir_2922 5c99f07879c4f692836e6e40ce46d3d7 326 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Amir_2922 5c99f07879c4f692836e6e40ce46d3d7 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 26 317 2.4E-6 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Amir_2922 5c99f07879c4f692836e6e40ce46d3d7 326 SUPERFAMILY SSF52283 20 134 1.39E-9 T 14-10-2018 Amir_2922 5c99f07879c4f692836e6e40ce46d3d7 326 Gene3D G3DSA:3.40.50.720 99 285 6.4E-87 T 14-10-2018 Amir_2922 5c99f07879c4f692836e6e40ce46d3d7 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 125 286 3.3E-42 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Amir_2922 5c99f07879c4f692836e6e40ce46d3d7 326 Gene3D G3DSA:3.40.50.720 10 308 6.4E-87 T 14-10-2018 Amir_2922 5c99f07879c4f692836e6e40ce46d3d7 326 SUPERFAMILY SSF51735 100 287 2.28E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1607 8d18fc00d51c0f97ade51c4f72a7fe3c 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 183 7.7E-6 T 14-10-2018 Amir_1607 8d18fc00d51c0f97ade51c4f72a7fe3c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1607 8d18fc00d51c0f97ade51c4f72a7fe3c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1607 8d18fc00d51c0f97ade51c4f72a7fe3c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 2.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1607 8d18fc00d51c0f97ade51c4f72a7fe3c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1607 8d18fc00d51c0f97ade51c4f72a7fe3c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1607 8d18fc00d51c0f97ade51c4f72a7fe3c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1607 8d18fc00d51c0f97ade51c4f72a7fe3c 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_1607 8d18fc00d51c0f97ade51c4f72a7fe3c 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 248 1.5E-58 T 14-10-2018 Amir_1607 8d18fc00d51c0f97ade51c4f72a7fe3c 251 SUPERFAMILY SSF51735 3 248 1.28E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1607 8d18fc00d51c0f97ade51c4f72a7fe3c 251 Gene3D G3DSA:3.40.50.720 2 250 9.1E-77 T 14-10-2018 Amir_1607 8d18fc00d51c0f97ade51c4f72a7fe3c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1607 8d18fc00d51c0f97ade51c4f72a7fe3c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1607 8d18fc00d51c0f97ade51c4f72a7fe3c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6004 dcc2e727eca5390834dc925bd93b7296 285 PRINTS PR01727 Prokaryotic integration host factor signature 39 54 6.0E-14 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Amir_6004 dcc2e727eca5390834dc925bd93b7296 285 PRINTS PR01727 Prokaryotic integration host factor signature 73 87 6.0E-14 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Amir_6004 dcc2e727eca5390834dc925bd93b7296 285 PRINTS PR01727 Prokaryotic integration host factor signature 57 70 6.0E-14 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Amir_6004 dcc2e727eca5390834dc925bd93b7296 285 Gene3D G3DSA:4.10.520.10 1 98 9.7E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Amir_6004 dcc2e727eca5390834dc925bd93b7296 285 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 45 64 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Amir_6004 dcc2e727eca5390834dc925bd93b7296 285 SMART SM00411 1 89 1.5E-34 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Amir_6004 dcc2e727eca5390834dc925bd93b7296 285 Pfam PF00216 Bacterial DNA-binding protein 1 88 1.9E-25 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Amir_6004 dcc2e727eca5390834dc925bd93b7296 285 SUPERFAMILY SSF47729 1 92 1.91E-25 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Amir_3143 8fe567227515d4d0a9ece851b72ef207 230 Gene3D G3DSA:1.10.357.10 80 218 2.0E-31 T 14-10-2018 Amir_3143 8fe567227515d4d0a9ece851b72ef207 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 44 82 2.7E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3143 8fe567227515d4d0a9ece851b72ef207 230 Gene3D G3DSA:1.10.10.60 29 78 1.4E-17 T 14-10-2018 Amir_3143 8fe567227515d4d0a9ece851b72ef207 230 SUPERFAMILY SSF46689 30 110 1.6E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3134 b8cdc6e82992ac9f646a45882f736b9e 875 Gene3D G3DSA:3.90.1150.10 441 856 1.5E-119 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_3134 b8cdc6e82992ac9f646a45882f736b9e 875 Pfam PF03109 ABC1 family 96 213 6.0E-26 T 14-10-2018 IPR004147 UbiB domain Amir_3134 b8cdc6e82992ac9f646a45882f736b9e 875 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 668 704 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_3134 b8cdc6e82992ac9f646a45882f736b9e 875 Gene3D G3DSA:3.40.640.10 500 760 1.5E-119 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_3134 b8cdc6e82992ac9f646a45882f736b9e 875 SMART SM00220 107 369 0.0099 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_3134 b8cdc6e82992ac9f646a45882f736b9e 875 Pfam PF00202 Aminotransferase class-III 463 784 5.7E-45 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_3134 b8cdc6e82992ac9f646a45882f736b9e 875 SUPERFAMILY SSF56112 78 349 2.14E-25 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_3134 b8cdc6e82992ac9f646a45882f736b9e 875 SUPERFAMILY SSF53383 439 867 8.76E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_6204 75013d9fc9f3772d945b803259dfa368 350 Gene3D G3DSA:1.10.10.10 2 73 3.6E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6204 75013d9fc9f3772d945b803259dfa368 350 ProSitePatterns PS01125 ROK family signature. 210 237 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_6204 75013d9fc9f3772d945b803259dfa368 350 SUPERFAMILY SSF53067 79 344 4.22E-41 T 14-10-2018 Amir_6204 75013d9fc9f3772d945b803259dfa368 350 Gene3D G3DSA:3.30.420.40 204 266 2.9E-19 T 14-10-2018 Amir_6204 75013d9fc9f3772d945b803259dfa368 350 Gene3D G3DSA:3.30.420.40 326 338 2.3E-5 T 14-10-2018 Amir_6204 75013d9fc9f3772d945b803259dfa368 350 Pfam PF00480 ROK family 87 260 1.2E-30 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_6204 75013d9fc9f3772d945b803259dfa368 350 Gene3D G3DSA:3.30.420.40 75 203 5.9E-30 T 14-10-2018 Amir_6204 75013d9fc9f3772d945b803259dfa368 350 SUPERFAMILY SSF46785 7 68 4.49E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6204 75013d9fc9f3772d945b803259dfa368 350 Gene3D G3DSA:3.30.420.40 270 325 2.3E-5 T 14-10-2018 Amir_6204 75013d9fc9f3772d945b803259dfa368 350 Pfam PF12802 MarR family 18 56 1.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_1324 6d7fdcb37fce5e7e2a8aa987a53cdf92 411 PIRSF PIRSF000447 4 411 3.9E-139 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Amir_1324 6d7fdcb37fce5e7e2a8aa987a53cdf92 411 SUPERFAMILY SSF53901 6 254 1.91E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_1324 6d7fdcb37fce5e7e2a8aa987a53cdf92 411 Gene3D G3DSA:3.40.47.10 1 258 3.2E-74 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_1324 6d7fdcb37fce5e7e2a8aa987a53cdf92 411 SUPERFAMILY SSF53901 216 409 2.35E-64 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_1324 6d7fdcb37fce5e7e2a8aa987a53cdf92 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 247 7.8E-55 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_1324 6d7fdcb37fce5e7e2a8aa987a53cdf92 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 257 368 5.5E-31 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_1324 6d7fdcb37fce5e7e2a8aa987a53cdf92 411 SMART SM00825 Beta-ketoacyl synthase 7 408 5.6E-15 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_1324 6d7fdcb37fce5e7e2a8aa987a53cdf92 411 Gene3D G3DSA:3.40.47.10 262 411 4.5E-45 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 Gene3D G3DSA:3.30.450.20 397 516 6.2E-25 T 14-10-2018 Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 Pfam PF00989 PAS fold 406 456 6.3E-11 T 14-10-2018 IPR013767 PAS fold GO:0006355 Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 Gene3D G3DSA:3.60.40.10 517 759 1.0E-57 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 SMART SM00065 251 401 7.6E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 Gene3D G3DSA:3.30.450.20 124 231 1.2E-22 T 14-10-2018 Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 SUPERFAMILY SSF55781 254 393 4.14E-23 T 14-10-2018 Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 SUPERFAMILY SSF55785 392 510 1.09E-21 T 14-10-2018 IPR035965 PAS domain superfamily Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 SUPERFAMILY SSF81606 562 757 1.33E-10 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 Pfam PF01590 GAF domain 254 387 1.4E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 SUPERFAMILY SSF55874 793 883 8.17E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 Gene3D G3DSA:3.30.565.10 760 884 2.7E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 Pfam PF08447 PAS fold 139 222 4.2E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 401 518 1.9E-22 T 14-10-2018 IPR000014 PAS domain Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 115 234 3.5E-7 T 14-10-2018 IPR000014 PAS domain Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 Pfam PF13581 Histidine kinase-like ATPase domain 769 880 1.1E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 575 757 2.3E-46 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 SUPERFAMILY SSF52091 911 1001 3.53E-10 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 Pfam PF13466 STAS domain 919 1001 7.1E-15 T 14-10-2018 IPR002645 STAS domain Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 Gene3D G3DSA:3.30.450.40 232 396 5.9E-19 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 SMART SM00086 187 229 0.044 T 14-10-2018 IPR001610 PAC motif Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 SMART SM00086 476 512 4.2 T 14-10-2018 IPR001610 PAC motif Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 SUPERFAMILY SSF55785 120 227 5.59E-17 T 14-10-2018 IPR035965 PAS domain superfamily Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 SMART SM00091 115 184 6.1E-9 T 14-10-2018 IPR000014 PAS domain Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 SMART SM00091 405 471 7.8E-13 T 14-10-2018 IPR000014 PAS domain Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 SMART SM00331 548 758 3.6E-35 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3736 2dec3bb8c063d2511e96a5a4299f340b 1017 Gene3D G3DSA:3.30.750.24 905 1004 5.6E-13 T 14-10-2018 IPR036513 STAS domain superfamily Amir_5198 49e63b4b86651cb1db172de899c46b3c 388 SUPERFAMILY SSF53748 11 387 8.01E-140 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5198 49e63b4b86651cb1db172de899c46b3c 388 Pfam PF00162 Phosphoglycerate kinase 12 377 1.8E-138 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5198 49e63b4b86651cb1db172de899c46b3c 388 Gene3D G3DSA:3.40.50.1260 12 383 2.0E-141 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5198 49e63b4b86651cb1db172de899c46b3c 388 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 387 39.965 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5198 49e63b4b86651cb1db172de899c46b3c 388 Gene3D G3DSA:3.40.50.1260 163 377 2.0E-141 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5198 49e63b4b86651cb1db172de899c46b3c 388 PIRSF PIRSF000724 1 388 1.5E-128 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5198 49e63b4b86651cb1db172de899c46b3c 388 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 16 26 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5198 49e63b4b86651cb1db172de899c46b3c 388 PRINTS PR00477 Phosphoglycerate kinase family signature 306 331 2.3E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5198 49e63b4b86651cb1db172de899c46b3c 388 PRINTS PR00477 Phosphoglycerate kinase family signature 99 114 2.3E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5198 49e63b4b86651cb1db172de899c46b3c 388 PRINTS PR00477 Phosphoglycerate kinase family signature 131 153 2.3E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5198 49e63b4b86651cb1db172de899c46b3c 388 PRINTS PR00477 Phosphoglycerate kinase family signature 363 380 2.3E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5198 49e63b4b86651cb1db172de899c46b3c 388 PRINTS PR00477 Phosphoglycerate kinase family signature 32 54 2.3E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5198 49e63b4b86651cb1db172de899c46b3c 388 PRINTS PR00477 Phosphoglycerate kinase family signature 161 183 2.3E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5198 49e63b4b86651cb1db172de899c46b3c 388 PRINTS PR00477 Phosphoglycerate kinase family signature 11 27 2.3E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5198 49e63b4b86651cb1db172de899c46b3c 388 PRINTS PR00477 Phosphoglycerate kinase family signature 339 350 2.3E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5198 49e63b4b86651cb1db172de899c46b3c 388 PRINTS PR00477 Phosphoglycerate kinase family signature 184 203 2.3E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_2487 053f563a21393cc863a15d8ff8b91bc7 377 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 128 140 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_2487 053f563a21393cc863a15d8ff8b91bc7 377 PIRSF PIRSF000654 24 258 9.1E-24 T 14-10-2018 Amir_2487 053f563a21393cc863a15d8ff8b91bc7 377 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 16 40 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_2487 053f563a21393cc863a15d8ff8b91bc7 377 SUPERFAMILY SSF56112 7 351 4.67E-68 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_2487 053f563a21393cc863a15d8ff8b91bc7 377 Pfam PF00069 Protein kinase domain 10 257 1.6E-40 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_2487 053f563a21393cc863a15d8ff8b91bc7 377 Gene3D G3DSA:1.10.510.10 92 275 2.0E-44 T 14-10-2018 Amir_2487 053f563a21393cc863a15d8ff8b91bc7 377 Gene3D G3DSA:3.30.200.20 4 89 9.4E-27 T 14-10-2018 Amir_2487 053f563a21393cc863a15d8ff8b91bc7 377 SMART SM00220 10 270 1.4E-50 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_5760 19e6ac0d2dd1aa449edb48836d62da4e 404 SMART SM00865 204 321 9.3E-57 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Amir_5760 19e6ac0d2dd1aa449edb48836d62da4e 404 ProSitePatterns PS01134 FtsZ protein signature 1. 41 75 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Amir_5760 19e6ac0d2dd1aa449edb48836d62da4e 404 Gene3D G3DSA:3.40.50.1440 1 217 5.3E-81 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Amir_5760 19e6ac0d2dd1aa449edb48836d62da4e 404 PRINTS PR00423 Cell division protein FtsZ signature 123 144 2.3E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Amir_5760 19e6ac0d2dd1aa449edb48836d62da4e 404 PRINTS PR00423 Cell division protein FtsZ signature 95 115 2.3E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Amir_5760 19e6ac0d2dd1aa449edb48836d62da4e 404 PRINTS PR00423 Cell division protein FtsZ signature 186 208 2.3E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Amir_5760 19e6ac0d2dd1aa449edb48836d62da4e 404 PRINTS PR00423 Cell division protein FtsZ signature 209 230 2.3E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Amir_5760 19e6ac0d2dd1aa449edb48836d62da4e 404 SMART SM00864 10 202 2.4E-109 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Amir_5760 19e6ac0d2dd1aa449edb48836d62da4e 404 SUPERFAMILY SSF52490 9 205 1.96E-66 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Amir_5760 19e6ac0d2dd1aa449edb48836d62da4e 404 Pfam PF12327 FtsZ family, C-terminal domain 219 313 1.5E-35 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Amir_5760 19e6ac0d2dd1aa449edb48836d62da4e 404 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 316 5.4E-128 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Amir_5760 19e6ac0d2dd1aa449edb48836d62da4e 404 Gene3D G3DSA:3.30.1330.20 218 326 1.9E-39 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 Amir_5760 19e6ac0d2dd1aa449edb48836d62da4e 404 SUPERFAMILY SSF55307 201 315 3.66E-43 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Amir_5760 19e6ac0d2dd1aa449edb48836d62da4e 404 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 6 347 38.347 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Amir_5760 19e6ac0d2dd1aa449edb48836d62da4e 404 ProSitePatterns PS01135 FtsZ protein signature 2. 94 115 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Amir_5760 19e6ac0d2dd1aa449edb48836d62da4e 404 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 11 169 1.4E-38 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Amir_0504 fbd3459a2a8dfc8d86e3134f24115be9 237 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 37 226 1.2E-81 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 Amir_0504 fbd3459a2a8dfc8d86e3134f24115be9 237 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 39 209 3.0E-32 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Amir_0504 fbd3459a2a8dfc8d86e3134f24115be9 237 Gene3D G3DSA:3.40.50.300 36 231 8.5E-45 T 14-10-2018 Amir_0504 fbd3459a2a8dfc8d86e3134f24115be9 237 Hamap MF_01389 Urease accessory protein UreG [ureG]. 35 233 42.805 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 Amir_0504 fbd3459a2a8dfc8d86e3134f24115be9 237 SUPERFAMILY SSF52540 29 228 2.04E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0504 fbd3459a2a8dfc8d86e3134f24115be9 237 PIRSF PIRSF005624 28 237 5.6E-43 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 Amir_6780 2ad1c884ae0d86c5c647669723bd65b7 155 Pfam PF07336 Putative stress-induced transcription regulator 3 98 2.9E-5 T 14-10-2018 IPR010852 Putative stress-induced transcription regulator Amir_6780 2ad1c884ae0d86c5c647669723bd65b7 155 SUPERFAMILY SSF160904 2 148 1.57E-30 T 14-10-2018 Amir_6780 2ad1c884ae0d86c5c647669723bd65b7 155 Pfam PF11706 CGNR zinc finger 106 149 2.8E-16 T 14-10-2018 IPR021005 Zinc finger, CGNR Amir_6780 2ad1c884ae0d86c5c647669723bd65b7 155 Gene3D G3DSA:1.10.3300.10 76 150 6.4E-18 T 14-10-2018 IPR023286 ABATE domain superfamily Amir_1058 72fac77058a8684a53cadd1bffb80fb1 322 SMART SM00342 232 315 2.0E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_1058 72fac77058a8684a53cadd1bffb80fb1 322 SUPERFAMILY SSF46689 269 319 1.08E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_1058 72fac77058a8684a53cadd1bffb80fb1 322 Pfam PF01965 DJ-1/PfpI family 4 177 1.4E-19 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Amir_1058 72fac77058a8684a53cadd1bffb80fb1 322 SUPERFAMILY SSF46689 220 266 7.77E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_1058 72fac77058a8684a53cadd1bffb80fb1 322 Pfam PF12833 Helix-turn-helix domain 238 316 2.5E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_1058 72fac77058a8684a53cadd1bffb80fb1 322 SUPERFAMILY SSF52317 3 198 9.99E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_1058 72fac77058a8684a53cadd1bffb80fb1 322 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 269 311 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amir_1058 72fac77058a8684a53cadd1bffb80fb1 322 Gene3D G3DSA:1.10.10.60 217 321 2.1E-26 T 14-10-2018 Amir_1058 72fac77058a8684a53cadd1bffb80fb1 322 Gene3D G3DSA:3.40.50.880 2 210 8.6E-56 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_4284 96811f53f03efb18be3011eee6ed5546 654 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 446 603 6.7E-31 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 106 353 1.5E-37 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 SUPERFAMILY SSF81665 84 326 9.68E-12 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 Gene3D G3DSA:2.70.150.20 126 237 1.6E-34 T 14-10-2018 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 Pfam PF00702 haloacid dehalogenase-like hydrolase 331 551 1.6E-43 T 14-10-2018 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 570 595 5.9E-7 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 510 526 5.9E-7 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 538 554 5.9E-7 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 Pfam PF00122 E1-E2 ATPase 133 311 3.3E-47 T 14-10-2018 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 538 557 4.1E-22 T 14-10-2018 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 485 495 4.1E-22 T 14-10-2018 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 332 346 4.1E-22 T 14-10-2018 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 182 196 4.1E-22 T 14-10-2018 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 562 574 4.1E-22 T 14-10-2018 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 462 473 4.1E-22 T 14-10-2018 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 SUPERFAMILY SSF81653 135 231 2.09E-24 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 334 340 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 ProSitePatterns PS01229 Hypothetical cof family signature 2. 538 560 - T 14-10-2018 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 Gene3D G3DSA:3.40.50.1000 313 590 1.9E-79 T 14-10-2018 IPR023214 HAD superfamily Amir_4284 96811f53f03efb18be3011eee6ed5546 654 Gene3D G3DSA:3.40.1110.10 343 469 1.9E-79 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Amir_4284 96811f53f03efb18be3011eee6ed5546 654 SUPERFAMILY SSF56784 331 638 1.03E-50 T 14-10-2018 IPR036412 HAD-like superfamily Amir_4284 96811f53f03efb18be3011eee6ed5546 654 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 82 641 5.1E-172 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amir_5824 eae66a10a36d6bc904618874c09f7b59 89 Pfam PF00312 Ribosomal protein S15 8 88 5.0E-36 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_5824 eae66a10a36d6bc904618874c09f7b59 89 SMART SM01387 8 88 6.5E-49 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_5824 eae66a10a36d6bc904618874c09f7b59 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 3.0E-20 T 14-10-2018 Amir_5824 eae66a10a36d6bc904618874c09f7b59 89 Gene3D G3DSA:1.10.287.10 1 89 1.0E-32 T 14-10-2018 Amir_5824 eae66a10a36d6bc904618874c09f7b59 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 7.2E-39 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5824 eae66a10a36d6bc904618874c09f7b59 89 SUPERFAMILY SSF47060 3 89 2.33E-34 T 14-10-2018 IPR009068 S15/NS1, RNA-binding Amir_5824 eae66a10a36d6bc904618874c09f7b59 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 23.048 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5824 eae66a10a36d6bc904618874c09f7b59 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_4144 7d673bb07a9bb9fe0107bb18a131f2a5 329 SUPERFAMILY SSF51182 40 312 8.09E-63 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_4144 7d673bb07a9bb9fe0107bb18a131f2a5 329 Pfam PF05726 Pirin C-terminal cupin domain 193 297 6.6E-14 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 Amir_4144 7d673bb07a9bb9fe0107bb18a131f2a5 329 Pfam PF02678 Pirin 42 141 3.5E-29 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Amir_4144 7d673bb07a9bb9fe0107bb18a131f2a5 329 Gene3D G3DSA:2.60.120.10 35 273 5.8E-60 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_4144 7d673bb07a9bb9fe0107bb18a131f2a5 329 PIRSF PIRSF006232 20 309 7.3E-73 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Amir_1059 46c900933ac957465d445fab7e84f145 253 SMART SM00420 6 58 1.8E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_1059 46c900933ac957465d445fab7e84f145 253 SUPERFAMILY SSF46785 5 60 3.57E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1059 46c900933ac957465d445fab7e84f145 253 Gene3D G3DSA:1.10.10.10 8 57 1.1E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1059 46c900933ac957465d445fab7e84f145 253 Pfam PF00455 DeoR C terminal sensor domain 75 233 5.6E-49 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain Amir_1059 46c900933ac957465d445fab7e84f145 253 SMART SM01134 73 234 3.7E-67 T 14-10-2018 Amir_1059 46c900933ac957465d445fab7e84f145 253 SUPERFAMILY SSF100950 74 235 9.0E-29 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Amir_1059 46c900933ac957465d445fab7e84f145 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 8.0E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_1059 46c900933ac957465d445fab7e84f145 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.6E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_1059 46c900933ac957465d445fab7e84f145 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.6E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_3517 6dabe732b9d597d94556b4d0e0c25b5b 305 Gene3D G3DSA:1.10.10.60 196 304 8.5E-26 T 14-10-2018 Amir_3517 6dabe732b9d597d94556b4d0e0c25b5b 305 SMART SM00342 218 300 1.3E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_3517 6dabe732b9d597d94556b4d0e0c25b5b 305 Pfam PF14525 AraC-binding-like domain 25 182 1.8E-17 T 14-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like Amir_3517 6dabe732b9d597d94556b4d0e0c25b5b 305 Pfam PF12833 Helix-turn-helix domain 224 302 1.8E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_3517 6dabe732b9d597d94556b4d0e0c25b5b 305 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 254 296 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amir_3517 6dabe732b9d597d94556b4d0e0c25b5b 305 SUPERFAMILY SSF46689 254 303 2.6E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3103 e21ee0ac039d6dec1eac672b2e0a7b16 401 Gene3D G3DSA:3.30.300.10 15 286 2.4E-166 T 14-10-2018 Amir_3103 e21ee0ac039d6dec1eac672b2e0a7b16 401 Gene3D G3DSA:3.30.300.10 106 389 2.4E-166 T 14-10-2018 Amir_3103 e21ee0ac039d6dec1eac672b2e0a7b16 401 SUPERFAMILY SSF55973 8 113 4.71E-45 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_3103 e21ee0ac039d6dec1eac672b2e0a7b16 401 Pfam PF02772 S-adenosylmethionine synthetase, central domain 128 247 1.8E-42 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_3103 e21ee0ac039d6dec1eac672b2e0a7b16 401 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 6 399 55.468 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_3103 e21ee0ac039d6dec1eac672b2e0a7b16 401 Gene3D G3DSA:3.30.300.10 9 249 2.4E-166 T 14-10-2018 Amir_3103 e21ee0ac039d6dec1eac672b2e0a7b16 401 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 249 387 3.5E-65 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_3103 e21ee0ac039d6dec1eac672b2e0a7b16 401 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 130 140 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_3103 e21ee0ac039d6dec1eac672b2e0a7b16 401 SUPERFAMILY SSF55973 249 398 8.24E-65 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_3103 e21ee0ac039d6dec1eac672b2e0a7b16 401 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 9 398 2.7E-164 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_3103 e21ee0ac039d6dec1eac672b2e0a7b16 401 PIRSF PIRSF000497 2 400 8.1E-162 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_3103 e21ee0ac039d6dec1eac672b2e0a7b16 401 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 9 105 2.3E-41 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_3103 e21ee0ac039d6dec1eac672b2e0a7b16 401 SUPERFAMILY SSF55973 124 248 4.32E-45 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_3103 e21ee0ac039d6dec1eac672b2e0a7b16 401 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 275 283 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_4091 2330221fe6db78a7e0fc6edd8bcacb74 392 SUPERFAMILY SSF56645 8 208 6.54E-31 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_4091 2330221fe6db78a7e0fc6edd8bcacb74 392 SUPERFAMILY SSF47203 233 371 7.23E-9 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_4091 2330221fe6db78a7e0fc6edd8bcacb74 392 Gene3D G3DSA:1.20.140.10 212 391 1.9E-29 T 14-10-2018 Amir_4091 2330221fe6db78a7e0fc6edd8bcacb74 392 Gene3D G3DSA:2.40.110.10 114 207 2.5E-25 T 14-10-2018 Amir_4091 2330221fe6db78a7e0fc6edd8bcacb74 392 PIRSF PIRSF016578 1 392 3.5E-109 T 14-10-2018 Amir_4091 2330221fe6db78a7e0fc6edd8bcacb74 392 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 241 370 7.4E-19 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Amir_4091 2330221fe6db78a7e0fc6edd8bcacb74 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 18 85 1.5E-6 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_4091 2330221fe6db78a7e0fc6edd8bcacb74 392 Gene3D G3DSA:1.10.540.10 4 112 8.5E-27 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_5985 c642567b8e98f67ab0902334bbd7b2ec 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 40 150 4.5E-20 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Amir_5985 c642567b8e98f67ab0902334bbd7b2ec 321 Gene3D G3DSA:3.90.650.10 158 320 4.6E-47 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amir_5985 c642567b8e98f67ab0902334bbd7b2ec 321 SUPERFAMILY SSF56042 155 311 2.54E-29 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amir_5985 c642567b8e98f67ab0902334bbd7b2ec 321 SUPERFAMILY SSF55326 13 149 1.79E-33 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amir_5985 c642567b8e98f67ab0902334bbd7b2ec 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 16 319 6.1E-81 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Amir_5985 c642567b8e98f67ab0902334bbd7b2ec 321 PIRSF PIRSF005303 10 320 5.6E-86 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Amir_5985 c642567b8e98f67ab0902334bbd7b2ec 321 Gene3D G3DSA:3.30.1330.10 11 151 5.1E-44 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amir_5985 c642567b8e98f67ab0902334bbd7b2ec 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 15 320 26.762 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Amir_5502 50658634def954cf5a667c53b7a2399c 275 SUPERFAMILY SSF50494 19 266 4.61E-64 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_5502 50658634def954cf5a667c53b7a2399c 275 Gene3D G3DSA:2.40.10.10 62 265 3.3E-71 T 14-10-2018 Amir_5502 50658634def954cf5a667c53b7a2399c 275 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 224 235 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site Amir_5502 50658634def954cf5a667c53b7a2399c 275 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 223 235 3.3E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_5502 50658634def954cf5a667c53b7a2399c 275 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 77 92 3.3E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_5502 50658634def954cf5a667c53b7a2399c 275 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 133 147 3.3E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_5502 50658634def954cf5a667c53b7a2399c 275 Gene3D G3DSA:2.40.10.10 50 263 3.3E-71 T 14-10-2018 Amir_5502 50658634def954cf5a667c53b7a2399c 275 SMART SM00020 49 269 9.0E-68 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_5502 50658634def954cf5a667c53b7a2399c 275 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 87 92 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 Amir_5502 50658634def954cf5a667c53b7a2399c 275 Pfam PF00089 Trypsin 50 266 1.4E-53 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_6685 d01f1795f9a98e36b781a208ff529e73 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 96 112 1.8E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_6685 d01f1795f9a98e36b781a208ff529e73 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 219 243 1.8E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_6685 d01f1795f9a98e36b781a208ff529e73 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 145 168 1.8E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_6685 d01f1795f9a98e36b781a208ff529e73 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 53 73 1.8E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_6685 d01f1795f9a98e36b781a208ff529e73 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 188 209 1.8E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_6685 d01f1795f9a98e36b781a208ff529e73 274 SUPERFAMILY SSF56655 21 267 9.16E-47 T 14-10-2018 Amir_6685 d01f1795f9a98e36b781a208ff529e73 274 Pfam PF00459 Inositol monophosphatase family 22 263 4.8E-41 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_6685 d01f1795f9a98e36b781a208ff529e73 274 Gene3D G3DSA:3.40.190.80 159 272 2.8E-14 T 14-10-2018 Amir_6685 d01f1795f9a98e36b781a208ff529e73 274 Gene3D G3DSA:3.30.540.10 16 154 4.8E-31 T 14-10-2018 Amir_6268 3e3258cbde24dddf98e643b19afaf2cf 294 SUPERFAMILY SSF53850 36 291 2.99E-41 T 14-10-2018 Amir_6268 3e3258cbde24dddf98e643b19afaf2cf 294 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 36 290 3.4E-39 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Amir_6268 3e3258cbde24dddf98e643b19afaf2cf 294 Gene3D G3DSA:3.40.190.10 38 291 8.7E-65 T 14-10-2018 Amir_6268 3e3258cbde24dddf98e643b19afaf2cf 294 Gene3D G3DSA:3.40.190.120 135 235 8.7E-65 T 14-10-2018 Amir_4688 52912511276eda4ec1cb348f636dd2bd 419 SMART SM00387 329 419 0.0015 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4688 52912511276eda4ec1cb348f636dd2bd 419 Pfam PF13796 Putative sensor 31 200 3.9E-15 T 14-10-2018 IPR025828 Putative sensor domain Amir_4688 52912511276eda4ec1cb348f636dd2bd 419 SUPERFAMILY SSF55874 326 416 2.86E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4688 52912511276eda4ec1cb348f636dd2bd 419 Gene3D G3DSA:3.30.565.10 300 417 3.3E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4688 52912511276eda4ec1cb348f636dd2bd 419 Pfam PF07730 Histidine kinase 229 295 3.8E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_2123 f79e8db4bf91e84735f7742bd5fdbb6d 442 SUPERFAMILY SSF56436 169 431 8.48E-79 T 14-10-2018 IPR016187 C-type lectin fold Amir_2123 f79e8db4bf91e84735f7742bd5fdbb6d 442 SUPERFAMILY SSF109854 5 141 8.85E-20 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_2123 f79e8db4bf91e84735f7742bd5fdbb6d 442 Hamap MF_02035 Hercynine oxygenase [egtB]. 1 431 51.746 T 14-10-2018 IPR032890 Hercynine oxygenase, Actinobacteria GO:0016491|GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 Amir_2123 f79e8db4bf91e84735f7742bd5fdbb6d 442 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 12 428 1.2E-133 T 14-10-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 Amir_2123 f79e8db4bf91e84735f7742bd5fdbb6d 442 Gene3D G3DSA:3.90.1580.10 169 441 3.3E-61 T 14-10-2018 Amir_2123 f79e8db4bf91e84735f7742bd5fdbb6d 442 Pfam PF03781 Sulfatase-modifying factor enzyme 1 172 429 3.3E-65 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Amir_2123 f79e8db4bf91e84735f7742bd5fdbb6d 442 Gene3D G3DSA:1.20.120.450 2 146 1.8E-6 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_2123 f79e8db4bf91e84735f7742bd5fdbb6d 442 Pfam PF12867 DinB superfamily 14 145 1.2E-26 T 14-10-2018 IPR024775 DinB-like domain Amir_3395 258a15e0f1be4268c8539a10bb50a2c7 434 Pfam PF00756 Putative esterase 193 425 1.9E-10 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Amir_3395 258a15e0f1be4268c8539a10bb50a2c7 434 Gene3D G3DSA:3.40.50.1820 157 430 1.6E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3395 258a15e0f1be4268c8539a10bb50a2c7 434 SUPERFAMILY SSF53474 173 429 1.2E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2824 a2025c4b11d25d23f7f16446f072ef51 302 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_2824 a2025c4b11d25d23f7f16446f072ef51 302 SUPERFAMILY SSF52540 7 228 1.78E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2824 a2025c4b11d25d23f7f16446f072ef51 302 Gene3D G3DSA:3.40.50.300 6 244 3.4E-63 T 14-10-2018 Amir_2824 a2025c4b11d25d23f7f16446f072ef51 302 SMART SM00382 32 224 7.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2824 a2025c4b11d25d23f7f16446f072ef51 302 Pfam PF00005 ABC transporter 24 167 3.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2374 4cc0019fdd4bf1ae3921832a060c4ddb 174 SMART SM00754 60 174 9.0E-22 T 14-10-2018 IPR010895 CHRD Amir_2374 4cc0019fdd4bf1ae3921832a060c4ddb 174 Pfam PF07452 CHRD domain 64 172 9.3E-23 T 14-10-2018 IPR010895 CHRD Amir_4695 2400a2470e15d7ba1adac74d5bbdfdbf 517 Pfam PF00202 Aminotransferase class-III 25 504 2.0E-58 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_4695 2400a2470e15d7ba1adac74d5bbdfdbf 517 Gene3D G3DSA:3.40.640.10 190 392 4.2E-56 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_4695 2400a2470e15d7ba1adac74d5bbdfdbf 517 PIRSF PIRSF000521 172 509 1.3E-23 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_4695 2400a2470e15d7ba1adac74d5bbdfdbf 517 PIRSF PIRSF000521 16 152 3.9E-4 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_4695 2400a2470e15d7ba1adac74d5bbdfdbf 517 Gene3D G3DSA:3.90.1150.10 41 61 6.4E-15 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_4695 2400a2470e15d7ba1adac74d5bbdfdbf 517 SUPERFAMILY SSF53383 27 506 4.82E-71 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_4695 2400a2470e15d7ba1adac74d5bbdfdbf 517 Gene3D G3DSA:3.40.640.10 62 136 6.4E-15 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_4695 2400a2470e15d7ba1adac74d5bbdfdbf 517 Gene3D G3DSA:3.90.1150.10 393 497 4.2E-56 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_2726 cdc9b0e293f29ac075c2094c90e62992 558 Gene3D G3DSA:3.40.50.980 36 193 3.0E-44 T 14-10-2018 Amir_2726 cdc9b0e293f29ac075c2094c90e62992 558 Pfam PF00501 AMP-binding enzyme 46 456 3.5E-84 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_2726 cdc9b0e293f29ac075c2094c90e62992 558 Gene3D G3DSA:3.40.50.980 197 368 1.1E-54 T 14-10-2018 Amir_2726 cdc9b0e293f29ac075c2094c90e62992 558 SUPERFAMILY SSF56801 22 553 5.1E-134 T 14-10-2018 Amir_2726 cdc9b0e293f29ac075c2094c90e62992 558 ProSitePatterns PS00455 Putative AMP-binding domain signature. 202 213 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_2726 cdc9b0e293f29ac075c2094c90e62992 558 Gene3D G3DSA:2.30.38.10 369 450 3.0E-26 T 14-10-2018 Amir_2726 cdc9b0e293f29ac075c2094c90e62992 558 Pfam PF13193 AMP-binding enzyme C-terminal domain 465 542 3.9E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_2726 cdc9b0e293f29ac075c2094c90e62992 558 Gene3D G3DSA:3.30.300.310 452 556 3.4E-29 T 14-10-2018 Amir_6341 8511f4ca141c31b9840f8ea5f3fc9d4c 354 SUPERFAMILY SSF53756 7 339 7.85E-60 T 14-10-2018 Amir_6341 8511f4ca141c31b9840f8ea5f3fc9d4c 354 Pfam PF00534 Glycosyl transferases group 1 180 323 2.5E-21 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Amir_6341 8511f4ca141c31b9840f8ea5f3fc9d4c 354 Gene3D G3DSA:3.40.50.2000 14 338 1.2E-43 T 14-10-2018 Amir_6341 8511f4ca141c31b9840f8ea5f3fc9d4c 354 Pfam PF13439 Glycosyltransferase Family 4 16 167 3.5E-9 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amir_6341 8511f4ca141c31b9840f8ea5f3fc9d4c 354 Gene3D G3DSA:3.40.50.2000 168 327 1.2E-43 T 14-10-2018 Amir_0444 7d63133f101d834467799870894b17b1 201 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 36 193 6.7E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_0444 7d63133f101d834467799870894b17b1 201 SUPERFAMILY SSF88659 126 195 1.94E-6 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_0444 7d63133f101d834467799870894b17b1 201 SUPERFAMILY SSF88946 23 119 8.16E-17 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_0444 7d63133f101d834467799870894b17b1 201 Gene3D G3DSA:1.10.1740.10 17 103 3.9E-13 T 14-10-2018 Amir_0444 7d63133f101d834467799870894b17b1 201 Pfam PF04542 Sigma-70 region 2 40 102 4.3E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_0444 7d63133f101d834467799870894b17b1 201 Gene3D G3DSA:1.10.10.10 108 200 5.4E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0679 00ca3955df1c661c1018d6cc590cbbf8 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 4.7E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_0679 00ca3955df1c661c1018d6cc590cbbf8 327 SUPERFAMILY SSF52540 4 254 1.7E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0679 00ca3955df1c661c1018d6cc590cbbf8 327 Gene3D G3DSA:3.40.50.300 1 326 4.3E-98 T 14-10-2018 Amir_0679 00ca3955df1c661c1018d6cc590cbbf8 327 Pfam PF00005 ABC transporter 24 183 8.2E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0679 00ca3955df1c661c1018d6cc590cbbf8 327 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0679 00ca3955df1c661c1018d6cc590cbbf8 327 SMART SM00382 33 233 9.9E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0679 00ca3955df1c661c1018d6cc590cbbf8 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 2.3E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_2886 3192bfd1b9d0ddd42cfb3c8d02c8a798 295 SUPERFAMILY SSF52266 41 288 7.5E-58 T 14-10-2018 Amir_2886 3192bfd1b9d0ddd42cfb3c8d02c8a798 295 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 45 280 1.0E-27 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_2886 3192bfd1b9d0ddd42cfb3c8d02c8a798 295 Gene3D G3DSA:3.40.50.1110 39 289 3.7E-59 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_1251 bdaa72898643807391f8dae590534cc6 435 Pfam PF01595 Domain of unknown function DUF21 11 188 5.4E-32 T 14-10-2018 IPR002550 CNNM, transmembrane domain Amir_1251 bdaa72898643807391f8dae590534cc6 435 SUPERFAMILY SSF54631 190 327 1.01E-33 T 14-10-2018 Amir_1251 bdaa72898643807391f8dae590534cc6 435 SMART SM00116 276 324 5.6 T 14-10-2018 IPR000644 CBS domain Amir_1251 bdaa72898643807391f8dae590534cc6 435 SMART SM00116 212 261 2.8 T 14-10-2018 IPR000644 CBS domain Amir_1251 bdaa72898643807391f8dae590534cc6 435 SUPERFAMILY SSF56176 339 430 3.82E-15 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amir_1251 bdaa72898643807391f8dae590534cc6 435 Pfam PF00571 CBS domain 205 259 2.6E-5 T 14-10-2018 IPR000644 CBS domain Amir_1251 bdaa72898643807391f8dae590534cc6 435 Pfam PF00571 CBS domain 270 324 1.6E-7 T 14-10-2018 IPR000644 CBS domain Amir_1251 bdaa72898643807391f8dae590534cc6 435 Gene3D G3DSA:3.30.465.10 332 419 4.0E-19 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amir_1251 bdaa72898643807391f8dae590534cc6 435 Gene3D G3DSA:3.10.580.10 182 331 1.1E-54 T 14-10-2018 Amir_1251 bdaa72898643807391f8dae590534cc6 435 Pfam PF03471 Transporter associated domain 342 418 2.3E-12 T 14-10-2018 IPR005170 Transporter-associated domain Amir_1251 bdaa72898643807391f8dae590534cc6 435 SMART SM01091 340 422 2.8E-19 T 14-10-2018 IPR005170 Transporter-associated domain Amir_5849 0e0361b08d3cf8d3d0c0def3575e2749 255 Pfam PF03883 Peroxide stress protein YaaA 2 231 2.2E-35 T 14-10-2018 IPR005583 Peroxide stress protein YaaA Amir_2094 8e49228819aafe108c2e8a3f1b5c59ac 375 SUPERFAMILY SSF53756 4 363 6.73E-77 T 14-10-2018 Amir_2094 8e49228819aafe108c2e8a3f1b5c59ac 375 Gene3D G3DSA:3.40.50.2000 11 359 5.6E-121 T 14-10-2018 Amir_2094 8e49228819aafe108c2e8a3f1b5c59ac 375 Pfam PF13692 Glycosyl transferases group 1 190 328 1.7E-25 T 14-10-2018 Amir_2094 8e49228819aafe108c2e8a3f1b5c59ac 375 Pfam PF13439 Glycosyltransferase Family 4 14 173 2.2E-30 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amir_2094 8e49228819aafe108c2e8a3f1b5c59ac 375 Gene3D G3DSA:3.40.50.2000 171 346 5.6E-121 T 14-10-2018 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 SUPERFAMILY SSF56059 84 359 3.36E-68 T 14-10-2018 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 SUPERFAMILY SSF51246 334 451 3.92E-37 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 SUPERFAMILY SSF51569 517 829 1.36E-77 T 14-10-2018 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 Pfam PF02785 Biotin carboxylase C-terminal domain 339 446 7.4E-34 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 Pfam PF00364 Biotin-requiring enzyme 1066 1124 4.9E-15 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 4 1125 0.0 T 14-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 Gene3D G3DSA:3.20.20.70 476 989 1.1E-228 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 Gene3D G3DSA:3.10.600.10 459 1040 1.1E-228 T 14-10-2018 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 SUPERFAMILY SSF51230 1049 1125 8.38E-18 T 14-10-2018 IPR011053 Single hybrid motif Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 322 2.3E-70 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 Gene3D G3DSA:2.40.50.100 1049 1124 1.1E-20 T 14-10-2018 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 Gene3D G3DSA:3.30.470.130 1 454 4.2E-184 T 14-10-2018 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 111 8.5E-40 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 SMART SM00878 339 446 2.2E-53 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 Pfam PF00682 HMGL-like 525 796 4.0E-32 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1081 1098 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 SUPERFAMILY SSF52440 1 112 5.97E-41 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 Pfam PF02436 Conserved carboxylase domain 821 1008 2.2E-53 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 PIRSF PIRSF001594 1 1125 0.0 T 14-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Amir_5973 ba2c500d5cd94aa55422e10aacf33267 1125 SUPERFAMILY SSF89000 826 991 6.67E-40 T 14-10-2018 Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 Gene3D G3DSA:3.20.20.60 3 334 2.6E-167 T 14-10-2018 Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 Pfam PF00224 Pyruvate kinase, barrel domain 3 337 2.1E-119 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 Gene3D G3DSA:3.40.1380.20 335 464 2.6E-167 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 PRINTS PR01050 Pyruvate kinase family signature 243 267 4.7E-64 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 PRINTS PR01050 Pyruvate kinase family signature 268 292 4.7E-64 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 PRINTS PR01050 Pyruvate kinase family signature 216 242 4.7E-64 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 PRINTS PR01050 Pyruvate kinase family signature 312 328 4.7E-64 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 PRINTS PR01050 Pyruvate kinase family signature 185 199 4.7E-64 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 PRINTS PR01050 Pyruvate kinase family signature 293 311 4.7E-64 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 PRINTS PR01050 Pyruvate kinase family signature 60 76 4.7E-64 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 SUPERFAMILY SSF51621 2 337 6.28E-94 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 466 9.4E-25 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 Gene3D G3DSA:2.40.33.10 71 167 2.6E-167 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 467 8.4E-169 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 SUPERFAMILY SSF52935 322 468 4.97E-36 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 SUPERFAMILY SSF50800 71 165 1.33E-26 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Amir_5687 76fc1cbcfc64fda2f069761252fb1c7d 474 ProSitePatterns PS00110 Pyruvate kinase active site signature. 214 226 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amir_5204 077aa3a0b85e425d76a2faf60d237e89 350 Gene3D G3DSA:3.40.50.12300 3 316 1.7E-95 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily Amir_5204 077aa3a0b85e425d76a2faf60d237e89 350 SUPERFAMILY SSF142338 4 310 4.84E-82 T 14-10-2018 Amir_5204 077aa3a0b85e425d76a2faf60d237e89 350 Hamap MF_00973 Gluconeogenesis factor. 1 316 31.718 T 14-10-2018 IPR010119 Gluconeogenesis factor Amir_5204 077aa3a0b85e425d76a2faf60d237e89 350 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 6 275 4.1E-85 T 14-10-2018 IPR010119 Gluconeogenesis factor Amir_5204 077aa3a0b85e425d76a2faf60d237e89 350 Pfam PF01933 Uncharacterised protein family UPF0052 6 271 1.4E-72 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 Amir_5948 c69273f2a90cd20a87f5a6d7308e47c4 312 SUPERFAMILY SSF55729 185 302 2.3E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_5948 c69273f2a90cd20a87f5a6d7308e47c4 312 Pfam PF00583 Acetyltransferase (GNAT) family 211 297 6.6E-11 T 14-10-2018 IPR000182 GNAT domain Amir_5948 c69273f2a90cd20a87f5a6d7308e47c4 312 Gene3D G3DSA:3.40.630.30 183 307 3.9E-14 T 14-10-2018 Amir_4501 35360412d03f795fc022c016f5d8253f 527 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 7.7E-22 T 14-10-2018 Amir_4501 35360412d03f795fc022c016f5d8253f 527 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 7.7E-22 T 14-10-2018 Amir_4501 35360412d03f795fc022c016f5d8253f 527 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 7.7E-22 T 14-10-2018 Amir_4501 35360412d03f795fc022c016f5d8253f 527 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 7.7E-22 T 14-10-2018 Amir_4501 35360412d03f795fc022c016f5d8253f 527 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 7.7E-22 T 14-10-2018 Amir_4501 35360412d03f795fc022c016f5d8253f 527 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 1.6E-9 T 14-10-2018 IPR000362 Fumarate lyase family Amir_4501 35360412d03f795fc022c016f5d8253f 527 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 1.6E-9 T 14-10-2018 IPR000362 Fumarate lyase family Amir_4501 35360412d03f795fc022c016f5d8253f 527 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.6E-9 T 14-10-2018 IPR000362 Fumarate lyase family Amir_4501 35360412d03f795fc022c016f5d8253f 527 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 1.6E-9 T 14-10-2018 IPR000362 Fumarate lyase family Amir_4501 35360412d03f795fc022c016f5d8253f 527 Pfam PF00206 Lyase 103 294 4.6E-22 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Amir_4501 35360412d03f795fc022c016f5d8253f 527 Gene3D G3DSA:1.10.40.30 366 444 1.7E-94 T 14-10-2018 Amir_4501 35360412d03f795fc022c016f5d8253f 527 SUPERFAMILY SSF48557 30 460 1.57E-71 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Amir_4501 35360412d03f795fc022c016f5d8253f 527 Gene3D G3DSA:1.20.200.10 108 457 1.7E-94 T 14-10-2018 Amir_1495 001fc4c5bc08d084e00b2470879f7393 498 Gene3D G3DSA:3.40.50.150 139 290 3.8E-25 T 14-10-2018 Amir_1495 001fc4c5bc08d084e00b2470879f7393 498 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 224 230 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Amir_1495 001fc4c5bc08d084e00b2470879f7393 498 Pfam PF05175 Methyltransferase small domain 148 233 1.5E-13 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Amir_1495 001fc4c5bc08d084e00b2470879f7393 498 SUPERFAMILY SSF53335 153 309 1.34E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_1527 541fe427f4401c36970211a773d4da12 343 Gene3D G3DSA:3.30.565.10 191 342 1.7E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1527 541fe427f4401c36970211a773d4da12 343 SUPERFAMILY SSF47384 104 186 6.28E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_1527 541fe427f4401c36970211a773d4da12 343 SMART SM00388 121 188 5.7E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_1527 541fe427f4401c36970211a773d4da12 343 Pfam PF00512 His Kinase A (phospho-acceptor) domain 121 187 8.5E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_1527 541fe427f4401c36970211a773d4da12 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 320 1.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_1527 541fe427f4401c36970211a773d4da12 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 1.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_1527 541fe427f4401c36970211a773d4da12 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 339 1.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_1527 541fe427f4401c36970211a773d4da12 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 179 193 1.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_1527 541fe427f4401c36970211a773d4da12 343 SMART SM00387 231 342 2.6E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_1527 541fe427f4401c36970211a773d4da12 343 Pfam PF00672 HAMP domain 68 117 3.0E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_1527 541fe427f4401c36970211a773d4da12 343 SUPERFAMILY SSF55874 195 339 6.29E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1527 541fe427f4401c36970211a773d4da12 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 231 340 1.3E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_1527 541fe427f4401c36970211a773d4da12 343 Gene3D G3DSA:1.10.287.130 71 187 2.3E-28 T 14-10-2018 Amir_1527 541fe427f4401c36970211a773d4da12 343 SMART SM00304 67 120 7.6E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_1527 541fe427f4401c36970211a773d4da12 343 SUPERFAMILY SSF158472 68 117 1.7E-8 T 14-10-2018 Amir_1861 c9b2334083933d0f55bb499e9f5d433f 554 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 276 5.9E-10 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Amir_1861 c9b2334083933d0f55bb499e9f5d433f 554 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 7 535 5.7E-247 T 14-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 Amir_1861 c9b2334083933d0f55bb499e9f5d433f 554 Gene3D G3DSA:3.30.420.40 1 280 2.7E-65 T 14-10-2018 Amir_1861 c9b2334083933d0f55bb499e9f5d433f 554 SUPERFAMILY SSF53067 282 532 1.0E-58 T 14-10-2018 Amir_1861 c9b2334083933d0f55bb499e9f5d433f 554 Gene3D G3DSA:3.30.420.40 282 546 1.2E-76 T 14-10-2018 Amir_1861 c9b2334083933d0f55bb499e9f5d433f 554 PIRSF PIRSF000538 4 534 2.6E-60 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amir_1861 c9b2334083933d0f55bb499e9f5d433f 554 SUPERFAMILY SSF53067 6 280 3.89E-36 T 14-10-2018 Amir_1861 c9b2334083933d0f55bb499e9f5d433f 554 Hamap MF_00520 Ribulokinase [araB]. 4 543 48.187 T 14-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 Amir_1861 c9b2334083933d0f55bb499e9f5d433f 554 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 289 486 5.5E-42 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Amir_6280 58e531afd56fc1d61dcca81ad3a086d8 198 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 176 6.0E-53 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Amir_6280 58e531afd56fc1d61dcca81ad3a086d8 198 SUPERFAMILY SSF51182 1 195 1.07E-67 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_6280 58e531afd56fc1d61dcca81ad3a086d8 198 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 174 7.7E-57 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Amir_6280 58e531afd56fc1d61dcca81ad3a086d8 198 Gene3D G3DSA:2.60.120.10 1 198 1.2E-68 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_5700 0a980aa1c28c7f3d59d10460c1c4bc1d 261 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 239 6.7E-63 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Amir_5700 0a980aa1c28c7f3d59d10460c1c4bc1d 261 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Amir_5700 0a980aa1c28c7f3d59d10460c1c4bc1d 261 Gene3D G3DSA:3.20.20.70 1 258 6.3E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5700 0a980aa1c28c7f3d59d10460c1c4bc1d 261 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 257 31.79 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Amir_5700 0a980aa1c28c7f3d59d10460c1c4bc1d 261 Pfam PF00290 Tryptophan synthase alpha chain 8 239 1.2E-70 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Amir_5700 0a980aa1c28c7f3d59d10460c1c4bc1d 261 SUPERFAMILY SSF51366 3 245 5.89E-80 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Amir_3368 35a2e3aaae1133c0572a6fa7386e9b8e 782 Gene3D G3DSA:3.40.50.970 1 380 6.1E-149 T 14-10-2018 Amir_3368 35a2e3aaae1133c0572a6fa7386e9b8e 782 Gene3D G3DSA:3.40.50.920 600 782 9.4E-63 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_3368 35a2e3aaae1133c0572a6fa7386e9b8e 782 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 393 569 2.0E-75 T 14-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 Amir_3368 35a2e3aaae1133c0572a6fa7386e9b8e 782 Pfam PF09363 XFP C-terminal domain 580 780 1.8E-70 T 14-10-2018 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 Amir_3368 35a2e3aaae1133c0572a6fa7386e9b8e 782 SUPERFAMILY SSF52518 370 583 1.53E-22 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_3368 35a2e3aaae1133c0572a6fa7386e9b8e 782 Gene3D G3DSA:3.40.50.970 381 599 2.2E-90 T 14-10-2018 Amir_3368 35a2e3aaae1133c0572a6fa7386e9b8e 782 ProSitePatterns PS60002 Phosphoketolase signature 1. 140 146 - T 14-10-2018 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 Amir_3368 35a2e3aaae1133c0572a6fa7386e9b8e 782 SUPERFAMILY SSF52922 595 721 1.29E-5 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_3368 35a2e3aaae1133c0572a6fa7386e9b8e 782 SUPERFAMILY SSF52518 6 361 9.39E-56 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_3368 35a2e3aaae1133c0572a6fa7386e9b8e 782 Pfam PF09364 XFP N-terminal domain 10 377 1.6E-144 T 14-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal Amir_3368 35a2e3aaae1133c0572a6fa7386e9b8e 782 PIRSF PIRSF017245 2 782 1.2E-297 T 14-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 Amir_3368 35a2e3aaae1133c0572a6fa7386e9b8e 782 ProSitePatterns PS60003 Phosphoketolase signature 2. 153 171 - T 14-10-2018 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 Amir_3440 e95f748eddf69f06659842c39ccb1479 336 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Amir_3440 e95f748eddf69f06659842c39ccb1479 336 Pfam PF08279 HTH domain 7 62 4.5E-13 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Amir_3440 e95f748eddf69f06659842c39ccb1479 336 Pfam PF13280 WYL domain 143 322 7.1E-15 T 14-10-2018 IPR026881 WYL domain Amir_3440 e95f748eddf69f06659842c39ccb1479 336 SUPERFAMILY SSF46785 6 62 1.25E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3440 e95f748eddf69f06659842c39ccb1479 336 Gene3D G3DSA:1.10.10.10 4 65 5.4E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3440 e95f748eddf69f06659842c39ccb1479 336 SMART SM00420 7 63 7.9E-4 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_5465 5c3d23c5b03695b2e66e37b876f56d53 355 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 25 351 44.831 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Amir_5465 5c3d23c5b03695b2e66e37b876f56d53 355 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 68 349 4.0E-87 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Amir_5465 5c3d23c5b03695b2e66e37b876f56d53 355 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 37 104 1.4E-15 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Amir_5465 5c3d23c5b03695b2e66e37b876f56d53 355 SUPERFAMILY SSF46589 31 115 7.85E-14 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Amir_5465 5c3d23c5b03695b2e66e37b876f56d53 355 SUPERFAMILY SSF55681 109 351 1.55E-77 T 14-10-2018 Amir_5465 5c3d23c5b03695b2e66e37b876f56d53 355 Pfam PF01409 tRNA synthetases class II core domain (F) 109 350 4.0E-100 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Amir_5465 5c3d23c5b03695b2e66e37b876f56d53 355 Gene3D G3DSA:3.30.930.10 24 353 3.9E-108 T 14-10-2018 Amir_1756 9bfb9383976fc622e1fb8a1827ff7e71 261 SUPERFAMILY SSF52096 4 256 7.05E-54 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_1756 9bfb9383976fc622e1fb8a1827ff7e71 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 248 2.8E-30 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Amir_1756 9bfb9383976fc622e1fb8a1827ff7e71 261 Gene3D G3DSA:3.90.226.10 4 261 3.0E-55 T 14-10-2018 Amir_0423 2e8c8c33ae3de0bad21fc32ece68017b 184 SUPERFAMILY SSF46689 2 78 9.48E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0423 2e8c8c33ae3de0bad21fc32ece68017b 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 3.2E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0423 2e8c8c33ae3de0bad21fc32ece68017b 184 Gene3D G3DSA:1.10.357.10 1 184 2.0E-44 T 14-10-2018 Amir_0423 2e8c8c33ae3de0bad21fc32ece68017b 184 SUPERFAMILY SSF48498 78 174 3.81E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_6503 7d78fdfe87d227dcd03dc366e36e6015 523 SMART SM00798 141 458 8.2E-178 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amir_6503 7d78fdfe87d227dcd03dc366e36e6015 523 Pfam PF01808 AICARFT/IMPCHase bienzyme 142 457 1.1E-110 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amir_6503 7d78fdfe87d227dcd03dc366e36e6015 523 SMART SM00851 22 136 2.2E-47 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Amir_6503 7d78fdfe87d227dcd03dc366e36e6015 523 Pfam PF02142 MGS-like domain 22 135 2.3E-24 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Amir_6503 7d78fdfe87d227dcd03dc366e36e6015 523 Gene3D G3DSA:3.40.50.1380 2 203 8.8E-84 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Amir_6503 7d78fdfe87d227dcd03dc366e36e6015 523 Gene3D G3DSA:3.40.140.20 394 523 2.1E-51 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amir_6503 7d78fdfe87d227dcd03dc366e36e6015 523 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 11 523 2.4E-167 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amir_6503 7d78fdfe87d227dcd03dc366e36e6015 523 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 10 523 41.515 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amir_6503 7d78fdfe87d227dcd03dc366e36e6015 523 SUPERFAMILY SSF52335 10 198 2.49E-63 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Amir_6503 7d78fdfe87d227dcd03dc366e36e6015 523 PIRSF PIRSF000414 5 523 7.6E-190 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amir_6503 7d78fdfe87d227dcd03dc366e36e6015 523 Gene3D G3DSA:3.40.140.20 214 369 1.4E-55 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amir_6503 7d78fdfe87d227dcd03dc366e36e6015 523 SUPERFAMILY SSF53927 216 523 7.32E-113 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Amir_6002 1951e0711271690fe17e49ff3ca425c8 712 Pfam PF13089 Polyphosphate kinase N-terminal domain 35 141 3.2E-37 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 Amir_6002 1951e0711271690fe17e49ff3ca425c8 712 SUPERFAMILY SSF56024 532 706 7.18E-62 T 14-10-2018 Amir_6002 1951e0711271690fe17e49ff3ca425c8 712 SUPERFAMILY SSF140356 32 136 2.49E-37 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 Amir_6002 1951e0711271690fe17e49ff3ca425c8 712 Gene3D G3DSA:3.30.870.10 531 710 3.8E-58 T 14-10-2018 Amir_6002 1951e0711271690fe17e49ff3ca425c8 712 SUPERFAMILY SSF56024 351 526 3.08E-56 T 14-10-2018 Amir_6002 1951e0711271690fe17e49ff3ca425c8 712 Hamap MF_00347 Polyphosphate kinase [ppk]. 32 710 28.768 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Amir_6002 1951e0711271690fe17e49ff3ca425c8 712 PIRSF PIRSF015589 17 711 1.1E-271 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Amir_6002 1951e0711271690fe17e49ff3ca425c8 712 SUPERFAMILY SSF143724 138 339 5.49E-66 T 14-10-2018 Amir_6002 1951e0711271690fe17e49ff3ca425c8 712 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 34 705 5.1E-250 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Amir_6002 1951e0711271690fe17e49ff3ca425c8 712 Gene3D G3DSA:3.30.870.10 345 530 2.0E-74 T 14-10-2018 Amir_6002 1951e0711271690fe17e49ff3ca425c8 712 Pfam PF02503 Polyphosphate kinase middle domain 153 349 1.2E-68 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 Amir_6002 1951e0711271690fe17e49ff3ca425c8 712 Pfam PF13090 Polyphosphate kinase C-terminal domain 360 704 1.7E-148 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 Amir_6002 1951e0711271690fe17e49ff3ca425c8 712 Gene3D G3DSA:3.30.1840.10 27 340 9.5E-115 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 Amir_6491 14118b8087f03c0e77b1ba4fcf28d6d6 264 Gene3D G3DSA:3.40.190.80 155 261 1.0E-17 T 14-10-2018 Amir_6491 14118b8087f03c0e77b1ba4fcf28d6d6 264 SUPERFAMILY SSF56655 11 261 2.62E-33 T 14-10-2018 Amir_6491 14118b8087f03c0e77b1ba4fcf28d6d6 264 Pfam PF00459 Inositol monophosphatase family 16 260 6.6E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_6491 14118b8087f03c0e77b1ba4fcf28d6d6 264 Gene3D G3DSA:3.30.540.10 12 145 6.5E-17 T 14-10-2018 Amir_6491 14118b8087f03c0e77b1ba4fcf28d6d6 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 88 104 4.6E-7 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_6491 14118b8087f03c0e77b1ba4fcf28d6d6 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 48 68 4.6E-7 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_6491 14118b8087f03c0e77b1ba4fcf28d6d6 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 173 194 4.6E-7 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_6491 14118b8087f03c0e77b1ba4fcf28d6d6 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 4.6E-7 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_5906 017d1ec69ec6b59107ffc3da8829a7d2 271 SUPERFAMILY SSF54593 20 173 4.4E-13 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_5906 017d1ec69ec6b59107ffc3da8829a7d2 271 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 20 242 1.0E-4 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amir_5906 017d1ec69ec6b59107ffc3da8829a7d2 271 SUPERFAMILY SSF54593 134 248 3.03E-9 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_5906 017d1ec69ec6b59107ffc3da8829a7d2 271 Gene3D G3DSA:3.10.180.10 127 253 3.7E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_5906 017d1ec69ec6b59107ffc3da8829a7d2 271 Gene3D G3DSA:3.10.180.10 6 118 1.1E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_0003 e553841bac93d8fa83abff108614d855 304 Gene3D G3DSA:1.10.1040.10 162 292 3.8E-47 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amir_0003 e553841bac93d8fa83abff108614d855 304 SMART SM01350 162 289 6.7E-4 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_0003 e553841bac93d8fa83abff108614d855 304 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 50 79 4.0E-33 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_0003 e553841bac93d8fa83abff108614d855 304 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 226 253 4.0E-33 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_0003 e553841bac93d8fa83abff108614d855 304 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 103 128 4.0E-33 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_0003 e553841bac93d8fa83abff108614d855 304 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 15 4.0E-33 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_0003 e553841bac93d8fa83abff108614d855 304 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 151 179 4.0E-33 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_0003 e553841bac93d8fa83abff108614d855 304 SUPERFAMILY SSF51735 2 144 1.92E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0003 e553841bac93d8fa83abff108614d855 304 Gene3D G3DSA:3.40.50.720 1 161 3.1E-43 T 14-10-2018 Amir_0003 e553841bac93d8fa83abff108614d855 304 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 230 242 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_0003 e553841bac93d8fa83abff108614d855 304 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 2 292 7.5E-105 T 14-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 Amir_0003 e553841bac93d8fa83abff108614d855 304 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 162 272 2.9E-22 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amir_0003 e553841bac93d8fa83abff108614d855 304 SUPERFAMILY SSF48179 160 291 1.7E-39 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_0003 e553841bac93d8fa83abff108614d855 304 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 143 7.3E-35 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Amir_4865 f48c66f6f04621cb43fab87ccc3659da 477 Gene3D G3DSA:1.20.1250.20 261 462 2.4E-24 T 14-10-2018 Amir_4865 f48c66f6f04621cb43fab87ccc3659da 477 SUPERFAMILY SSF103473 6 468 3.53E-67 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4865 f48c66f6f04621cb43fab87ccc3659da 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 402 421 5.1E-12 T 14-10-2018 Amir_4865 f48c66f6f04621cb43fab87ccc3659da 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 5.1E-12 T 14-10-2018 Amir_4865 f48c66f6f04621cb43fab87ccc3659da 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 339 359 5.1E-12 T 14-10-2018 Amir_4865 f48c66f6f04621cb43fab87ccc3659da 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 5.1E-12 T 14-10-2018 Amir_4865 f48c66f6f04621cb43fab87ccc3659da 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 5.1E-12 T 14-10-2018 Amir_4865 f48c66f6f04621cb43fab87ccc3659da 477 Pfam PF07690 Major Facilitator Superfamily 15 411 3.5E-47 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_4865 f48c66f6f04621cb43fab87ccc3659da 477 Gene3D G3DSA:1.20.1720.10 12 233 8.6E-43 T 14-10-2018 Amir_6837 8ad5ac8abc0463ce8f6639473ae0a9ab 364 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 214 278 4.1E-19 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site Amir_6837 8ad5ac8abc0463ce8f6639473ae0a9ab 364 SUPERFAMILY SSF103025 23 267 5.02E-61 T 14-10-2018 Amir_6837 8ad5ac8abc0463ce8f6639473ae0a9ab 364 Gene3D G3DSA:3.30.1360.120 14 344 8.3E-69 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Amir_6837 8ad5ac8abc0463ce8f6639473ae0a9ab 364 Pfam PF01571 Aminomethyltransferase folate-binding domain 23 242 1.7E-33 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Amir_6837 8ad5ac8abc0463ce8f6639473ae0a9ab 364 PIRSF PIRSF006487 15 349 9.0E-22 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Amir_6837 8ad5ac8abc0463ce8f6639473ae0a9ab 364 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 252 342 3.2E-6 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Amir_6206 61fc3067eeae94661414cae20ee9f869 536 SUPERFAMILY SSF49384 30 134 1.19E-28 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_6206 61fc3067eeae94661414cae20ee9f869 536 Pfam PF00553 Cellulose binding domain 35 133 2.8E-27 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_6206 61fc3067eeae94661414cae20ee9f869 536 ProSitePatterns PS01095 Chitinases family 18 active site. 302 310 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 Amir_6206 61fc3067eeae94661414cae20ee9f869 536 Pfam PF00704 Glycosyl hydrolases family 18 171 521 2.3E-74 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 Amir_6206 61fc3067eeae94661414cae20ee9f869 536 Gene3D G3DSA:2.60.40.290 27 136 1.2E-30 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_6206 61fc3067eeae94661414cae20ee9f869 536 Gene3D G3DSA:3.20.20.80 172 524 2.9E-134 T 14-10-2018 Amir_6206 61fc3067eeae94661414cae20ee9f869 536 Gene3D G3DSA:3.10.50.10 436 496 2.9E-134 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily Amir_6206 61fc3067eeae94661414cae20ee9f869 536 SUPERFAMILY SSF54556 433 492 6.57E-14 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily Amir_6206 61fc3067eeae94661414cae20ee9f869 536 SUPERFAMILY SSF51445 163 535 3.6E-80 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_6206 61fc3067eeae94661414cae20ee9f869 536 SMART SM00636 168 521 2.0E-111 T 14-10-2018 IPR011583 Chitinase II GO:0008061 Amir_6206 61fc3067eeae94661414cae20ee9f869 536 SMART SM00637 34 133 5.8E-39 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_4405 d6abd9e53fc283436a92d3c2d883d656 434 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 382 427 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amir_4405 d6abd9e53fc283436a92d3c2d883d656 434 Gene3D G3DSA:1.10.10.60 329 434 5.2E-32 T 14-10-2018 Amir_4405 d6abd9e53fc283436a92d3c2d883d656 434 SUPERFAMILY SSF46689 328 380 2.24E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4405 d6abd9e53fc283436a92d3c2d883d656 434 Pfam PF12833 Helix-turn-helix domain 351 432 1.1E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4405 d6abd9e53fc283436a92d3c2d883d656 434 SMART SM00342 345 431 1.0E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4405 d6abd9e53fc283436a92d3c2d883d656 434 SUPERFAMILY SSF46689 381 432 4.4E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3106 a38e5e8446f7883da69676aa1723f6ef 548 SUPERFAMILY SSF50370 419 546 6.29E-40 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_3106 a38e5e8446f7883da69676aa1723f6ef 548 Gene3D G3DSA:2.80.10.50 418 548 9.4E-42 T 14-10-2018 Amir_3106 a38e5e8446f7883da69676aa1723f6ef 548 SUPERFAMILY SSF51011 319 414 8.35E-18 T 14-10-2018 Amir_3106 a38e5e8446f7883da69676aa1723f6ef 548 Gene3D G3DSA:2.60.40.1180 330 415 6.6E-23 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_3106 a38e5e8446f7883da69676aa1723f6ef 548 Pfam PF00652 Ricin-type beta-trefoil lectin domain 423 545 2.1E-29 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3106 a38e5e8446f7883da69676aa1723f6ef 548 SMART SM00458 420 548 1.4E-24 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3106 a38e5e8446f7883da69676aa1723f6ef 548 Gene3D G3DSA:3.20.20.70 39 329 1.4E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_3106 a38e5e8446f7883da69676aa1723f6ef 548 PRINTS PR00740 Glycosyl hydrolase family 27 signature 73 88 5.1E-47 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_3106 a38e5e8446f7883da69676aa1723f6ef 548 PRINTS PR00740 Glycosyl hydrolase family 27 signature 37 56 5.1E-47 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_3106 a38e5e8446f7883da69676aa1723f6ef 548 PRINTS PR00740 Glycosyl hydrolase family 27 signature 261 280 5.1E-47 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_3106 a38e5e8446f7883da69676aa1723f6ef 548 PRINTS PR00740 Glycosyl hydrolase family 27 signature 282 303 5.1E-47 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_3106 a38e5e8446f7883da69676aa1723f6ef 548 PRINTS PR00740 Glycosyl hydrolase family 27 signature 184 202 5.1E-47 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_3106 a38e5e8446f7883da69676aa1723f6ef 548 PRINTS PR00740 Glycosyl hydrolase family 27 signature 155 172 5.1E-47 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_3106 a38e5e8446f7883da69676aa1723f6ef 548 Pfam PF16499 Alpha galactosidase A 42 326 4.3E-73 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_3106 a38e5e8446f7883da69676aa1723f6ef 548 ProSitePatterns PS00512 Alpha-galactosidase signature. 78 94 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_3106 a38e5e8446f7883da69676aa1723f6ef 548 SUPERFAMILY SSF51445 36 327 5.97E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_6105 daba129c81521126eaaefa17373c7711 146 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 127 2.2E-22 T 14-10-2018 Amir_6105 daba129c81521126eaaefa17373c7711 146 SUPERFAMILY SSF54593 8 143 3.49E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_6105 daba129c81521126eaaefa17373c7711 146 Gene3D G3DSA:3.10.180.10 5 144 8.9E-40 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_6105 daba129c81521126eaaefa17373c7711 146 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 11 142 4.4E-40 T 14-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 Amir_1639 32b2cba935382cf5ab5cd9eb28b202bb 654 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 175 326 6.9E-12 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_1639 32b2cba935382cf5ab5cd9eb28b202bb 654 Gene3D G3DSA:3.40.50.1110 158 338 2.1E-16 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_1639 32b2cba935382cf5ab5cd9eb28b202bb 654 SUPERFAMILY SSF52266 19 335 3.45E-20 T 14-10-2018 Amir_4408 25f7fb51f7d898fa5d331e94ccfc2213 393 SUPERFAMILY SSF53756 22 382 4.11E-83 T 14-10-2018 Amir_4408 25f7fb51f7d898fa5d331e94ccfc2213 393 Gene3D G3DSA:3.40.50.2000 1 380 1.5E-109 T 14-10-2018 Amir_4408 25f7fb51f7d898fa5d331e94ccfc2213 393 Pfam PF13439 Glycosyltransferase Family 4 21 190 2.1E-30 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amir_4408 25f7fb51f7d898fa5d331e94ccfc2213 393 Pfam PF00534 Glycosyl transferases group 1 197 359 1.4E-32 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Amir_4408 25f7fb51f7d898fa5d331e94ccfc2213 393 Gene3D G3DSA:3.40.50.2000 187 363 1.5E-109 T 14-10-2018 Amir_1142 0709879b82a430eda002a72fa3a46d00 852 TIGRFAM TIGR02412 pepN_strep_liv: aminopeptidase N 5 848 0.0 T 14-10-2018 IPR012778 Peptidase M1, aminopeptidase GO:0004177|GO:0006508 KEGG: 00480+3.4.11.2 Amir_1142 0709879b82a430eda002a72fa3a46d00 852 Gene3D G3DSA:2.60.40.1730 18 203 1.1E-29 T 14-10-2018 Amir_1142 0709879b82a430eda002a72fa3a46d00 852 Pfam PF11838 ERAP1-like C-terminal domain 533 840 1.7E-63 T 14-10-2018 IPR024571 ERAP1-like C-terminal domain Amir_1142 0709879b82a430eda002a72fa3a46d00 852 SUPERFAMILY SSF63737 6 202 2.48E-40 T 14-10-2018 Amir_1142 0709879b82a430eda002a72fa3a46d00 852 Pfam PF01433 Peptidase family M1 domain 217 450 4.3E-57 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amir_1142 0709879b82a430eda002a72fa3a46d00 852 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 185 200 4.2E-23 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amir_1142 0709879b82a430eda002a72fa3a46d00 852 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 268 278 4.2E-23 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amir_1142 0709879b82a430eda002a72fa3a46d00 852 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 321 333 4.2E-23 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amir_1142 0709879b82a430eda002a72fa3a46d00 852 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 302 317 4.2E-23 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amir_1142 0709879b82a430eda002a72fa3a46d00 852 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 137 152 4.2E-23 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amir_1142 0709879b82a430eda002a72fa3a46d00 852 SUPERFAMILY SSF55486 216 460 8.06E-76 T 14-10-2018 Amir_1142 0709879b82a430eda002a72fa3a46d00 852 Gene3D G3DSA:1.10.390.60 211 455 5.8E-69 T 14-10-2018 Amir_6702 5ddc5bcdd4060fd360b164a681b7f92a 544 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 7 415 1.4E-110 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Amir_6702 5ddc5bcdd4060fd360b164a681b7f92a 544 Gene3D G3DSA:3.40.50.1220 206 348 1.2E-26 T 14-10-2018 Amir_6702 5ddc5bcdd4060fd360b164a681b7f92a 544 SUPERFAMILY SSF52518 351 525 4.16E-19 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_6702 5ddc5bcdd4060fd360b164a681b7f92a 544 SUPERFAMILY SSF52518 8 184 3.58E-28 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_6702 5ddc5bcdd4060fd360b164a681b7f92a 544 PIRSF PIRSF004983 1 544 3.1E-139 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Amir_6702 5ddc5bcdd4060fd360b164a681b7f92a 544 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 1 539 33.425 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Amir_6702 5ddc5bcdd4060fd360b164a681b7f92a 544 Gene3D G3DSA:3.40.50.970 2 194 6.2E-62 T 14-10-2018 Amir_6702 5ddc5bcdd4060fd360b164a681b7f92a 544 Gene3D G3DSA:3.40.50.970 351 539 2.8E-69 T 14-10-2018 Amir_6702 5ddc5bcdd4060fd360b164a681b7f92a 544 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 398 511 5.7E-7 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amir_6702 5ddc5bcdd4060fd360b164a681b7f92a 544 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 8 171 8.8E-27 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 SUPERFAMILY SSF52777 2179 2380 7.67E-28 T 14-10-2018 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 SUPERFAMILY SSF52777 246 482 5.11E-49 T 14-10-2018 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1044 1059 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 SUPERFAMILY SSF52777 2366 2610 2.56E-45 T 14-10-2018 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 ProSitePatterns PS00455 Putative AMP-binding domain signature. 650 661 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Gene3D G3DSA:3.40.50.1820 1011 1113 1.0E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 SMART SM00823 Phosphopantetheine attachment site 2093 2162 5.8E-8 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 SMART SM00823 Phosphopantetheine attachment site 1019 1089 0.56 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 SUPERFAMILY SSF47336 1012 1085 1.28E-12 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Gene3D G3DSA:3.30.300.30 905 1010 2.2E-32 T 14-10-2018 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Gene3D G3DSA:3.40.50.12780 498 903 2.2E-117 T 14-10-2018 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Gene3D G3DSA:3.40.50.12780 1568 1970 3.6E-119 T 14-10-2018 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 SUPERFAMILY SSF52777 1296 1542 1.33E-42 T 14-10-2018 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Pfam PF00550 Phosphopantetheine attachment site 1021 1084 4.4E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Pfam PF00550 Phosphopantetheine attachment site 2097 2158 8.2E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Gene3D G3DSA:3.30.559.30 239 478 8.3E-109 T 14-10-2018 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Gene3D G3DSA:3.30.300.30 1974 2080 2.3E-30 T 14-10-2018 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 SUPERFAMILY SSF47336 2089 2198 6.81E-18 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Gene3D G3DSA:3.30.559.30 2364 2614 2.9E-89 T 14-10-2018 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Gene3D G3DSA:3.30.559.30 1294 1547 1.1E-84 T 14-10-2018 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 SUPERFAMILY SSF52777 1111 1309 2.89E-26 T 14-10-2018 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Gene3D G3DSA:3.30.559.10 2180 2363 4.9E-60 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Gene3D G3DSA:3.30.559.10 1114 1291 2.1E-55 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Pfam PF00668 Condensation domain 1116 1539 1.1E-30 T 14-10-2018 IPR001242 Condensation domain Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Pfam PF00668 Condensation domain 2220 2609 6.9E-33 T 14-10-2018 IPR001242 Condensation domain Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Pfam PF00668 Condensation domain 64 480 2.3E-74 T 14-10-2018 IPR001242 Condensation domain Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1599 2002 6.6E-118 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 529 935 2.1E-111 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Pfam PF00501 AMP-binding enzyme 508 911 3.3E-83 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Pfam PF00501 AMP-binding enzyme 1581 1977 2.2E-90 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Gene3D G3DSA:1.10.1200.10 2081 2165 1.2E-23 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Pfam PF13193 AMP-binding enzyme C-terminal domain 1986 2061 2.1E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Pfam PF13193 AMP-binding enzyme C-terminal domain 919 993 1.3E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 SUPERFAMILY SSF56801 1569 2105 1.96E-141 T 14-10-2018 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 SUPERFAMILY SSF56801 501 1032 1.14E-138 T 14-10-2018 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 SUPERFAMILY SSF52777 63 235 5.11E-42 T 14-10-2018 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 Gene3D G3DSA:3.30.559.10 63 425 8.3E-109 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3675 9f1ee5950f40d1be1aaf635ce1984565 2619 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1719 1730 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_6257 7f53725531372ae1c271e92283036274 351 SUPERFAMILY SSF47413 4 66 3.49E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_6257 7f53725531372ae1c271e92283036274 351 Pfam PF13560 Helix-turn-helix domain 8 60 2.9E-13 T 14-10-2018 Amir_6257 7f53725531372ae1c271e92283036274 351 Gene3D G3DSA:1.10.260.40 3 67 2.3E-13 T 14-10-2018 Amir_6257 7f53725531372ae1c271e92283036274 351 SMART SM00530 8 63 3.5E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_6257 7f53725531372ae1c271e92283036274 351 Pfam PF06114 IrrE N-terminal-like domain 168 268 4.7E-11 T 14-10-2018 IPR010359 IrrE N-terminal-like domain Amir_5261 d5b0cc863f455db2be2b4606963769a1 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Amir_5261 d5b0cc863f455db2be2b4606963769a1 90 Pfam PF00381 PTS HPr component phosphorylation site 3 84 2.1E-26 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like Amir_5261 d5b0cc863f455db2be2b4606963769a1 90 Gene3D G3DSA:3.30.1340.10 1 88 3.0E-26 T 14-10-2018 IPR035895 HPr-like superfamily Amir_5261 d5b0cc863f455db2be2b4606963769a1 90 SUPERFAMILY SSF55594 1 89 6.54E-23 T 14-10-2018 IPR035895 HPr-like superfamily Amir_5261 d5b0cc863f455db2be2b4606963769a1 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 83 2.5E-25 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like Amir_5261 d5b0cc863f455db2be2b4606963769a1 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 3.8E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like Amir_5261 d5b0cc863f455db2be2b4606963769a1 90 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.8E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like Amir_5261 d5b0cc863f455db2be2b4606963769a1 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 3.8E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like Amir_6040 18accd3856257b8daa6f89dc372d9435 295 Gene3D G3DSA:3.40.190.10 167 267 2.8E-34 T 14-10-2018 Amir_6040 18accd3856257b8daa6f89dc372d9435 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_6040 18accd3856257b8daa6f89dc372d9435 295 SUPERFAMILY SSF53850 95 291 1.25E-36 T 14-10-2018 Amir_6040 18accd3856257b8daa6f89dc372d9435 295 SUPERFAMILY SSF46785 5 113 5.05E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6040 18accd3856257b8daa6f89dc372d9435 295 Gene3D G3DSA:3.40.190.10 95 278 2.8E-34 T 14-10-2018 Amir_6040 18accd3856257b8daa6f89dc372d9435 295 Gene3D G3DSA:1.10.10.10 2 88 4.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6040 18accd3856257b8daa6f89dc372d9435 295 Pfam PF03466 LysR substrate binding domain 91 290 4.2E-40 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_5455 96c06dd56b397f16da8dbefd7a524246 390 Gene3D G3DSA:3.10.20.340 265 390 5.7E-41 T 14-10-2018 Amir_5455 96c06dd56b397f16da8dbefd7a524246 390 Pfam PF01960 ArgJ family 15 390 8.4E-130 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amir_5455 96c06dd56b397f16da8dbefd7a524246 390 SUPERFAMILY SSF56266 10 386 2.62E-125 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amir_5455 96c06dd56b397f16da8dbefd7a524246 390 Gene3D G3DSA:3.60.70.12 1 185 1.2E-66 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amir_5455 96c06dd56b397f16da8dbefd7a524246 390 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 390 133.815 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amir_5455 96c06dd56b397f16da8dbefd7a524246 390 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 5 389 1.6E-112 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amir_5455 96c06dd56b397f16da8dbefd7a524246 390 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 21 388 6.0E-116 T 14-10-2018 Amir_5455 96c06dd56b397f16da8dbefd7a524246 390 Gene3D G3DSA:3.30.2330.10 186 264 3.9E-26 T 14-10-2018 Amir_3102 17b0af5b59582f273cfd96e33dc5c849 491 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 17 490 1.5E-144 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Amir_3102 17b0af5b59582f273cfd96e33dc5c849 491 PIRSF PIRSF001109 7 491 7.7E-189 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Amir_3102 17b0af5b59582f273cfd96e33dc5c849 491 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 89 103 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Amir_3102 17b0af5b59582f273cfd96e33dc5c849 491 SUPERFAMILY SSF52283 16 491 5.5E-111 T 14-10-2018 Amir_3102 17b0af5b59582f273cfd96e33dc5c849 491 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 13 483 48.099 T 14-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 Amir_3102 17b0af5b59582f273cfd96e33dc5c849 491 SMART SM00996 17 490 0.0 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Amir_3102 17b0af5b59582f273cfd96e33dc5c849 491 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 18 483 6.1E-190 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Amir_3102 17b0af5b59582f273cfd96e33dc5c849 491 Gene3D G3DSA:3.40.50.1480 20 491 2.7E-236 T 14-10-2018 Amir_3102 17b0af5b59582f273cfd96e33dc5c849 491 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 271 287 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Amir_3102 17b0af5b59582f273cfd96e33dc5c849 491 SMART SM00997 249 411 4.8E-106 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Amir_3102 17b0af5b59582f273cfd96e33dc5c849 491 Gene3D G3DSA:3.40.50.720 252 412 2.7E-236 T 14-10-2018 Amir_3102 17b0af5b59582f273cfd96e33dc5c849 491 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 249 411 2.0E-79 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Amir_3102 17b0af5b59582f273cfd96e33dc5c849 491 SUPERFAMILY SSF51735 249 411 3.11E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2317 a8c307cb9a3a5624787f5bc10d805fd0 120 SMART SM00448 1 115 3.3E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2317 a8c307cb9a3a5624787f5bc10d805fd0 120 Pfam PF00072 Response regulator receiver domain 3 114 3.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2317 a8c307cb9a3a5624787f5bc10d805fd0 120 SUPERFAMILY SSF52172 1 119 2.13E-34 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2317 a8c307cb9a3a5624787f5bc10d805fd0 120 Gene3D G3DSA:3.40.50.2300 1 120 7.2E-32 T 14-10-2018 Amir_4745 ccb5b7eb519e493d065e728111ddaea8 183 Gene3D G3DSA:1.10.1740.10 10 95 7.2E-25 T 14-10-2018 Amir_4745 ccb5b7eb519e493d065e728111ddaea8 183 Gene3D G3DSA:1.10.10.10 117 183 2.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4745 ccb5b7eb519e493d065e728111ddaea8 183 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 182 1.9E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_4745 ccb5b7eb519e493d065e728111ddaea8 183 Pfam PF04542 Sigma-70 region 2 29 98 3.5E-8 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_4745 ccb5b7eb519e493d065e728111ddaea8 183 SUPERFAMILY SSF88946 6 115 3.4E-22 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_4745 ccb5b7eb519e493d065e728111ddaea8 183 Pfam PF08281 Sigma-70, region 4 127 177 2.8E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_4745 ccb5b7eb519e493d065e728111ddaea8 183 SUPERFAMILY SSF88659 120 182 3.27E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_2398 990f0f26f02462e802884043a36a52f0 121 Pfam PF01479 S4 domain 5 50 1.2E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_2398 990f0f26f02462e802884043a36a52f0 121 Gene3D G3DSA:3.10.290.10 1 100 4.9E-27 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amir_2398 990f0f26f02462e802884043a36a52f0 121 SMART SM00363 4 65 6.2E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_2398 990f0f26f02462e802884043a36a52f0 121 PIRSF PIRSF016821 1 121 6.7E-46 T 14-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 Amir_2398 990f0f26f02462e802884043a36a52f0 121 SUPERFAMILY SSF55174 3 85 1.7E-20 T 14-10-2018 Amir_3135 1a0a15af3b566199b5a92c2e1cd6e4f9 288 Gene3D G3DSA:1.10.1040.10 165 285 3.0E-20 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amir_3135 1a0a15af3b566199b5a92c2e1cd6e4f9 288 PIRSF PIRSF000103 4 284 5.5E-20 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Amir_3135 1a0a15af3b566199b5a92c2e1cd6e4f9 288 SUPERFAMILY SSF51735 9 155 2.57E-14 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3135 1a0a15af3b566199b5a92c2e1cd6e4f9 288 Gene3D G3DSA:3.40.50.720 5 159 4.8E-23 T 14-10-2018 Amir_3135 1a0a15af3b566199b5a92c2e1cd6e4f9 288 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 63 2.6E-7 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Amir_3434 b4f8719febd7e14a6f7c076b1ac45c74 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 68 1.0E-4 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3434 b4f8719febd7e14a6f7c076b1ac45c74 221 SUPERFAMILY SSF46689 9 90 2.19E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3434 b4f8719febd7e14a6f7c076b1ac45c74 221 Gene3D G3DSA:1.10.357.10 17 194 2.1E-45 T 14-10-2018 Amir_0958 55d31941c32615d70012b461beb51508 1067 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 118 181 5.8E-11 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 Amir_0958 55d31941c32615d70012b461beb51508 1067 SUPERFAMILY SSF52540 255 540 3.04E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0958 55d31941c32615d70012b461beb51508 1067 Gene3D G3DSA:3.90.1570.50 111 189 1.6E-6 T 14-10-2018 Amir_0958 55d31941c32615d70012b461beb51508 1067 Gene3D G3DSA:3.40.50.300 540 779 4.0E-17 T 14-10-2018 Amir_0958 55d31941c32615d70012b461beb51508 1067 Gene3D G3DSA:3.40.50.300 284 466 7.3E-17 T 14-10-2018 Amir_0958 55d31941c32615d70012b461beb51508 1067 Pfam PF04851 Type III restriction enzyme, res subunit 284 457 4.5E-6 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Amir_0958 55d31941c32615d70012b461beb51508 1067 SMART SM00487 279 540 3.4E-5 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_1274 3e06f3dfb3a7b614e8f13ddac5fbda05 329 Pfam PF08281 Sigma-70, region 4 122 172 2.6E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_1274 3e06f3dfb3a7b614e8f13ddac5fbda05 329 Gene3D G3DSA:1.10.10.10 121 178 5.8E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1274 3e06f3dfb3a7b614e8f13ddac5fbda05 329 SUPERFAMILY SSF54427 186 300 3.21E-13 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_1274 3e06f3dfb3a7b614e8f13ddac5fbda05 329 SUPERFAMILY SSF88659 120 173 3.05E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_1274 3e06f3dfb3a7b614e8f13ddac5fbda05 329 SUPERFAMILY SSF88946 17 99 7.06E-16 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_1274 3e06f3dfb3a7b614e8f13ddac5fbda05 329 Gene3D G3DSA:1.10.1740.10 13 91 1.3E-10 T 14-10-2018 Amir_1274 3e06f3dfb3a7b614e8f13ddac5fbda05 329 Pfam PF04542 Sigma-70 region 2 21 86 2.7E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_1274 3e06f3dfb3a7b614e8f13ddac5fbda05 329 Gene3D G3DSA:3.10.450.50 183 303 7.7E-7 T 14-10-2018 Amir_1274 3e06f3dfb3a7b614e8f13ddac5fbda05 329 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 172 4.2E-17 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_2066 c6c7baf4964a97756e69765a692c91b9 818 Pfam PF00672 HAMP domain 367 406 2.6E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_2066 c6c7baf4964a97756e69765a692c91b9 818 SUPERFAMILY SSF55874 509 634 1.44E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2066 c6c7baf4964a97756e69765a692c91b9 818 Pfam PF08376 Nitrate and nitrite sensing 68 288 6.1E-19 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein Amir_2066 c6c7baf4964a97756e69765a692c91b9 818 SMART SM00387 526 636 7.6E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2066 c6c7baf4964a97756e69765a692c91b9 818 Gene3D G3DSA:3.30.565.10 486 635 1.9E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2066 c6c7baf4964a97756e69765a692c91b9 818 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 529 632 2.7E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4229 14f51bcb2e1a0e4b46dd5a8fd395a154 258 Gene3D G3DSA:1.10.1660.10 6 251 7.3E-21 T 14-10-2018 Amir_4229 14f51bcb2e1a0e4b46dd5a8fd395a154 258 SUPERFAMILY SSF46955 4 101 3.44E-18 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_4229 14f51bcb2e1a0e4b46dd5a8fd395a154 258 SMART SM00422 3 72 1.3E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4229 14f51bcb2e1a0e4b46dd5a8fd395a154 258 Pfam PF00376 MerR family regulatory protein 4 41 5.3E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6826 22cd164cf1b8a25001a7ad7cee856a92 140 Gene3D G3DSA:3.40.30.10 38 132 9.8E-11 T 14-10-2018 Amir_6826 22cd164cf1b8a25001a7ad7cee856a92 140 SUPERFAMILY SSF52833 47 131 1.56E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_6826 22cd164cf1b8a25001a7ad7cee856a92 140 Pfam PF00085 Thioredoxin 48 128 1.4E-5 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 Amir_4281 079f81c770c3b7bd399d2bae8b77f80f 332 Gene3D G3DSA:3.40.50.1820 27 301 3.7E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4281 079f81c770c3b7bd399d2bae8b77f80f 332 SUPERFAMILY SSF53474 25 296 8.19E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4281 079f81c770c3b7bd399d2bae8b77f80f 332 Pfam PF12146 Serine aminopeptidase, S33 59 285 6.9E-8 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Amir_1322 d475e7fc13c51ce2b31e6e5e815de422 854 Pfam PF00069 Protein kinase domain 236 409 4.1E-8 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_1322 d475e7fc13c51ce2b31e6e5e815de422 854 Gene3D G3DSA:1.10.510.10 312 425 2.2E-19 T 14-10-2018 Amir_1322 d475e7fc13c51ce2b31e6e5e815de422 854 SUPERFAMILY SSF158745 511 701 3.27E-15 T 14-10-2018 Amir_1322 d475e7fc13c51ce2b31e6e5e815de422 854 Gene3D G3DSA:3.30.200.20 224 311 2.2E-19 T 14-10-2018 Amir_1322 d475e7fc13c51ce2b31e6e5e815de422 854 SUPERFAMILY SSF56112 225 418 4.1E-20 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_1322 d475e7fc13c51ce2b31e6e5e815de422 854 SUPERFAMILY SSF158745 722 827 3.66E-5 T 14-10-2018 Amir_1322 d475e7fc13c51ce2b31e6e5e815de422 854 SMART SM00220 225 517 0.0012 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_1322 d475e7fc13c51ce2b31e6e5e815de422 854 SMART SM01260 518 841 7.2E-6 T 14-10-2018 IPR007822 Lanthionine synthetase C-like Amir_2954 5b995c91b3871cc1acf7a5e1ec970ffc 1146 Pfam PF00486 Transcriptional regulatory protein, C terminal 29 102 2.5E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2954 5b995c91b3871cc1acf7a5e1ec970ffc 1146 Gene3D G3DSA:1.10.10.10 3 104 1.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2954 5b995c91b3871cc1acf7a5e1ec970ffc 1146 Pfam PF13191 AAA ATPase domain 282 444 1.0E-16 T 14-10-2018 Amir_2954 5b995c91b3871cc1acf7a5e1ec970ffc 1146 SMART SM01043 109 253 4.0E-39 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_2954 5b995c91b3871cc1acf7a5e1ec970ffc 1146 Gene3D G3DSA:1.25.40.10 108 279 3.5E-42 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2954 5b995c91b3871cc1acf7a5e1ec970ffc 1146 Gene3D G3DSA:1.25.40.10 615 929 4.7E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2954 5b995c91b3871cc1acf7a5e1ec970ffc 1146 SUPERFAMILY SSF48452 720 888 4.55E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2954 5b995c91b3871cc1acf7a5e1ec970ffc 1146 SUPERFAMILY SSF46894 9 102 2.78E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_2954 5b995c91b3871cc1acf7a5e1ec970ffc 1146 SMART SM00862 22 102 1.9E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2954 5b995c91b3871cc1acf7a5e1ec970ffc 1146 SUPERFAMILY SSF52540 277 519 2.86E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2954 5b995c91b3871cc1acf7a5e1ec970ffc 1146 SUPERFAMILY SSF48452 105 274 3.76E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2954 5b995c91b3871cc1acf7a5e1ec970ffc 1146 Pfam PF03704 Bacterial transcriptional activator domain 110 250 3.0E-36 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_4241 6a2e1dbb34d0de4d6d1aaaba285aaa07 422 Gene3D G3DSA:3.40.190.10 38 420 5.3E-65 T 14-10-2018 Amir_4241 6a2e1dbb34d0de4d6d1aaaba285aaa07 422 SUPERFAMILY SSF53850 44 412 3.89E-59 T 14-10-2018 Amir_4241 6a2e1dbb34d0de4d6d1aaaba285aaa07 422 Pfam PF01547 Bacterial extracellular solute-binding protein 54 324 2.2E-33 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_0643 39665ef4fd447113cdd734bd1255900f 256 Pfam PF01026 TatD related DNase 2 252 5.4E-69 T 14-10-2018 IPR001130 TatD family GO:0016788 Amir_0643 39665ef4fd447113cdd734bd1255900f 256 PIRSF PIRSF005902 1 256 9.0E-70 T 14-10-2018 IPR001130 TatD family GO:0016788 Amir_0643 39665ef4fd447113cdd734bd1255900f 256 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Amir_0643 39665ef4fd447113cdd734bd1255900f 256 SUPERFAMILY SSF51556 2 254 3.5E-78 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_0643 39665ef4fd447113cdd734bd1255900f 256 Gene3D G3DSA:3.20.20.140 1 254 3.0E-82 T 14-10-2018 Amir_0643 39665ef4fd447113cdd734bd1255900f 256 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 253 3.3E-79 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Amir_6626 76caaaf24f648f8ba6f6fd4055eee327 1298 Gene3D G3DSA:1.10.132.30 718 852 8.4E-48 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6626 76caaaf24f648f8ba6f6fd4055eee327 1298 Gene3D G3DSA:1.10.150.390 1197 1260 3.1E-29 T 14-10-2018 Amir_6626 76caaaf24f648f8ba6f6fd4055eee327 1298 Pfam PF04983 RNA polymerase Rpb1, domain 3 564 721 4.4E-23 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6626 76caaaf24f648f8ba6f6fd4055eee327 1298 Pfam PF04998 RNA polymerase Rpb1, domain 5 828 1196 1.2E-62 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6626 76caaaf24f648f8ba6f6fd4055eee327 1298 Gene3D G3DSA:1.10.1790.20 1010 1195 5.6E-65 T 14-10-2018 Amir_6626 76caaaf24f648f8ba6f6fd4055eee327 1298 Pfam PF05000 RNA polymerase Rpb1, domain 4 758 819 1.7E-7 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6626 76caaaf24f648f8ba6f6fd4055eee327 1298 SUPERFAMILY SSF64484 5 1249 0.0 T 14-10-2018 Amir_6626 76caaaf24f648f8ba6f6fd4055eee327 1298 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1258 17.412 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6626 76caaaf24f648f8ba6f6fd4055eee327 1298 Gene3D G3DSA:1.10.40.90 449 491 1.7E-23 T 14-10-2018 Amir_6626 76caaaf24f648f8ba6f6fd4055eee327 1298 Gene3D G3DSA:1.10.274.100 565 717 4.8E-36 T 14-10-2018 Amir_6626 76caaaf24f648f8ba6f6fd4055eee327 1298 Pfam PF00623 RNA polymerase Rpb1, domain 2 468 560 2.7E-28 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6626 76caaaf24f648f8ba6f6fd4055eee327 1298 Pfam PF00623 RNA polymerase Rpb1, domain 2 419 464 2.4E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6626 76caaaf24f648f8ba6f6fd4055eee327 1298 Pfam PF04997 RNA polymerase Rpb1, domain 1 7 417 1.7E-82 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6626 76caaaf24f648f8ba6f6fd4055eee327 1298 SMART SM00663 310 589 1.9E-173 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6626 76caaaf24f648f8ba6f6fd4055eee327 1298 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1248 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_6626 76caaaf24f648f8ba6f6fd4055eee327 1298 Gene3D G3DSA:2.40.50.100 1026 1096 5.6E-65 T 14-10-2018 Amir_2403 1582efbdf313dc40fc493a48abaf9e33 379 Gene3D G3DSA:3.40.50.2300 60 306 1.9E-73 T 14-10-2018 Amir_2403 1582efbdf313dc40fc493a48abaf9e33 379 Gene3D G3DSA:1.10.260.40 2 59 4.6E-21 T 14-10-2018 Amir_2403 1582efbdf313dc40fc493a48abaf9e33 379 SMART SM00354 6 76 1.4E-23 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_2403 1582efbdf313dc40fc493a48abaf9e33 379 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 1.1E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_2403 1582efbdf313dc40fc493a48abaf9e33 379 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 1.1E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_2403 1582efbdf313dc40fc493a48abaf9e33 379 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 14-10-2018 Amir_2403 1582efbdf313dc40fc493a48abaf9e33 379 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 51 4.2E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_2403 1582efbdf313dc40fc493a48abaf9e33 379 SUPERFAMILY SSF47413 6 65 8.44E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2403 1582efbdf313dc40fc493a48abaf9e33 379 SUPERFAMILY SSF53822 66 332 2.17E-67 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_2403 1582efbdf313dc40fc493a48abaf9e33 379 Pfam PF13377 Periplasmic binding protein-like domain 169 330 9.3E-43 T 14-10-2018 Amir_2403 1582efbdf313dc40fc493a48abaf9e33 379 Gene3D G3DSA:3.40.50.2300 160 289 1.9E-73 T 14-10-2018 Amir_0845 4fcb63cd272ec6e71a9fc7ec4b5efc4a 456 Gene3D G3DSA:1.10.287.130 154 269 1.1E-24 T 14-10-2018 Amir_0845 4fcb63cd272ec6e71a9fc7ec4b5efc4a 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 311 421 1.4E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0845 4fcb63cd272ec6e71a9fc7ec4b5efc4a 456 SMART SM00387 310 424 4.5E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0845 4fcb63cd272ec6e71a9fc7ec4b5efc4a 456 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 1.6E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_0845 4fcb63cd272ec6e71a9fc7ec4b5efc4a 456 Gene3D G3DSA:3.30.565.10 284 427 4.3E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0845 4fcb63cd272ec6e71a9fc7ec4b5efc4a 456 SMART SM00304 150 203 2.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_0845 4fcb63cd272ec6e71a9fc7ec4b5efc4a 456 SUPERFAMILY SSF55874 258 424 1.57E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0845 4fcb63cd272ec6e71a9fc7ec4b5efc4a 456 SUPERFAMILY SSF47384 188 269 5.49E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_0845 4fcb63cd272ec6e71a9fc7ec4b5efc4a 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 4.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_0845 4fcb63cd272ec6e71a9fc7ec4b5efc4a 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 421 4.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_0845 4fcb63cd272ec6e71a9fc7ec4b5efc4a 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 400 4.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_0845 4fcb63cd272ec6e71a9fc7ec4b5efc4a 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 375 4.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_0845 4fcb63cd272ec6e71a9fc7ec4b5efc4a 456 Pfam PF00672 HAMP domain 150 199 7.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_0845 4fcb63cd272ec6e71a9fc7ec4b5efc4a 456 SMART SM00388 204 269 2.9E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_0845 4fcb63cd272ec6e71a9fc7ec4b5efc4a 456 SUPERFAMILY SSF158472 150 200 2.62E-5 T 14-10-2018 Amir_5035 f86d2fb914410fc07cbc719ff375e3da 145 Pfam PF00072 Response regulator receiver domain 10 130 3.0E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5035 f86d2fb914410fc07cbc719ff375e3da 145 SMART SM00448 8 130 2.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5035 f86d2fb914410fc07cbc719ff375e3da 145 SUPERFAMILY SSF52172 9 134 1.12E-33 T 14-10-2018 IPR011006 CheY-like superfamily Amir_5035 f86d2fb914410fc07cbc719ff375e3da 145 Gene3D G3DSA:3.40.50.2300 3 145 7.7E-37 T 14-10-2018 Amir_0233 c84017c60139137ebd74fe369ea66e69 319 Gene3D G3DSA:3.60.21.10 46 252 1.8E-12 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Amir_0233 c84017c60139137ebd74fe369ea66e69 319 SUPERFAMILY SSF56300 43 296 6.14E-25 T 14-10-2018 Amir_0233 c84017c60139137ebd74fe369ea66e69 319 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 48 231 1.4E-8 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Amir_0667 0c132b5017a1a9e0e1ef43a2eeb0fc70 328 Gene3D G3DSA:1.10.287.1080 256 322 1.5E-6 T 14-10-2018 Amir_0667 0c132b5017a1a9e0e1ef43a2eeb0fc70 328 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 118 193 2.4E-25 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Amir_0667 0c132b5017a1a9e0e1ef43a2eeb0fc70 328 Gene3D G3DSA:1.10.287.1080 95 220 1.1E-41 T 14-10-2018 Amir_0667 0c132b5017a1a9e0e1ef43a2eeb0fc70 328 TIGRFAM TIGR00444 mazG: MazG family protein 102 249 2.2E-44 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG Amir_0667 0c132b5017a1a9e0e1ef43a2eeb0fc70 328 SUPERFAMILY SSF101386 99 196 5.56E-23 T 14-10-2018 Amir_6927 be8886f77d46ef24eb558acaa1db1dfa 461 Gene3D G3DSA:3.30.465.40 4 234 1.1E-73 T 14-10-2018 Amir_6927 be8886f77d46ef24eb558acaa1db1dfa 461 SUPERFAMILY SSF55103 220 458 1.57E-57 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Amir_6927 be8886f77d46ef24eb558acaa1db1dfa 461 Pfam PF01565 FAD binding domain 40 179 3.1E-43 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Amir_6927 be8886f77d46ef24eb558acaa1db1dfa 461 SUPERFAMILY SSF56176 2 216 2.06E-76 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amir_6927 be8886f77d46ef24eb558acaa1db1dfa 461 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 453 7.5E-61 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Amir_6927 be8886f77d46ef24eb558acaa1db1dfa 461 Gene3D G3DSA:3.30.70.2740 332 414 9.0E-12 T 14-10-2018 Amir_6927 be8886f77d46ef24eb558acaa1db1dfa 461 Gene3D G3DSA:1.10.45.10 415 454 1.5E-11 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Amir_0007 249abad2a34cf02a902ba6208808c0c8 840 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 821 23.396 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Amir_0007 249abad2a34cf02a902ba6208808c0c8 840 Gene3D G3DSA:1.10.268.10 382 470 2.1E-197 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Amir_0007 249abad2a34cf02a902ba6208808c0c8 840 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 18 819 0.0 T 14-10-2018 Amir_0007 249abad2a34cf02a902ba6208808c0c8 840 Gene3D G3DSA:3.90.199.10 40 499 2.1E-197 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Amir_0007 249abad2a34cf02a902ba6208808c0c8 840 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 516 563 2.4E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amir_0007 249abad2a34cf02a902ba6208808c0c8 840 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 566 613 8.7E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amir_0007 249abad2a34cf02a902ba6208808c0c8 840 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 670 718 3.1E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amir_0007 249abad2a34cf02a902ba6208808c0c8 840 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 773 817 8.7E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amir_0007 249abad2a34cf02a902ba6208808c0c8 840 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 623 666 6.1E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amir_0007 249abad2a34cf02a902ba6208808c0c8 840 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 724 770 2.0E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amir_0007 249abad2a34cf02a902ba6208808c0c8 840 Gene3D G3DSA:2.120.10.90 513 821 9.0E-126 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Amir_0007 249abad2a34cf02a902ba6208808c0c8 840 SUPERFAMILY SSF56719 14 501 3.14E-166 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Amir_0007 249abad2a34cf02a902ba6208808c0c8 840 SMART SM00434 19 477 5.5E-254 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amir_0007 249abad2a34cf02a902ba6208808c0c8 840 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 40 476 6.0E-147 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amir_0007 249abad2a34cf02a902ba6208808c0c8 840 SUPERFAMILY SSF101904 511 827 3.79E-101 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Amir_0007 249abad2a34cf02a902ba6208808c0c8 840 Gene3D G3DSA:3.30.1360.40 248 345 2.1E-197 T 14-10-2018 Amir_0771 959ecdcb33b9c7d6578a366d3393ce7d 363 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 219 232 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Amir_0771 959ecdcb33b9c7d6578a366d3393ce7d 363 Gene3D G3DSA:3.40.640.10 41 268 1.4E-81 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_0771 959ecdcb33b9c7d6578a366d3393ce7d 363 Gene3D G3DSA:3.90.1150.10 15 354 1.4E-81 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_0771 959ecdcb33b9c7d6578a366d3393ce7d 363 Pfam PF00155 Aminotransferase class I and II 29 361 2.0E-44 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_0771 959ecdcb33b9c7d6578a366d3393ce7d 363 TIGRFAM TIGR03539 DapC_actino: succinyldiaminopimelate transaminase 7 361 5.8E-172 T 14-10-2018 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ Amir_0771 959ecdcb33b9c7d6578a366d3393ce7d 363 SUPERFAMILY SSF53383 20 363 1.39E-77 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 Gene3D G3DSA:3.40.50.300 158 349 1.3E-70 T 14-10-2018 Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 SUPERFAMILY SSF52540 158 547 2.2E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 633 651 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 Pfam PF07724 AAA domain (Cdc48 subfamily) 598 759 8.7E-54 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 318 1.4E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 67 4.1E-10 T 14-10-2018 IPR004176 Clp, N-terminal Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 146 3.1E-15 T 14-10-2018 IPR004176 Clp, N-terminal Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 Gene3D G3DSA:3.40.50.300 552 764 1.8E-84 T 14-10-2018 Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 666 6.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 710 724 6.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 677 695 6.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 603 621 6.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 846 4.8E-26 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 7 852 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 Gene3D G3DSA:1.10.8.60 766 859 3.1E-28 T 14-10-2018 Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 SUPERFAMILY SSF52540 548 850 2.21E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 SUPERFAMILY SSF81923 7 157 5.0E-36 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 SMART SM01086 766 857 4.3E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 Gene3D G3DSA:3.40.50.300 350 546 7.8E-73 T 14-10-2018 Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 Gene3D G3DSA:1.10.1780.10 1 151 1.0E-32 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 SMART SM00382 599 748 1.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6943 b189d4f8dbeb3293d5f765ca80f3820c 860 SMART SM00382 199 345 1.3E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0611 446768a1a336f3e79bf196c589d99944 378 Pfam PF13530 Sterol carrier protein domain 167 369 6.2E-27 T 14-10-2018 IPR025559 Enhanced intracellular survival protein domain Amir_0611 446768a1a336f3e79bf196c589d99944 378 Gene3D G3DSA:3.40.630.30 1 124 9.1E-32 T 14-10-2018 Amir_0611 446768a1a336f3e79bf196c589d99944 378 Gene3D G3DSA:3.30.1050.10 274 368 6.9E-21 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Amir_0611 446768a1a336f3e79bf196c589d99944 378 Gene3D G3DSA:3.40.630.30 125 270 5.0E-8 T 14-10-2018 Amir_0611 446768a1a336f3e79bf196c589d99944 378 SUPERFAMILY SSF55718 273 378 1.77E-15 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Amir_0611 446768a1a336f3e79bf196c589d99944 378 Pfam PF13527 Acetyltransferase (GNAT) domain 3 121 2.7E-24 T 14-10-2018 Amir_0611 446768a1a336f3e79bf196c589d99944 378 SUPERFAMILY SSF55729 3 272 2.12E-46 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_5067 a4dcd6e2e75ac403df84b5f4ba6b3810 549 Pfam PF00005 ABC transporter 337 480 2.9E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5067 a4dcd6e2e75ac403df84b5f4ba6b3810 549 Gene3D G3DSA:1.20.1560.10 2 314 2.3E-54 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_5067 a4dcd6e2e75ac403df84b5f4ba6b3810 549 SUPERFAMILY SSF52540 336 542 4.3E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5067 a4dcd6e2e75ac403df84b5f4ba6b3810 549 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_5067 a4dcd6e2e75ac403df84b5f4ba6b3810 549 Pfam PF00664 ABC transporter transmembrane region 21 283 7.1E-24 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_5067 a4dcd6e2e75ac403df84b5f4ba6b3810 549 SUPERFAMILY SSF90123 7 314 1.14E-53 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_5067 a4dcd6e2e75ac403df84b5f4ba6b3810 549 Gene3D G3DSA:3.40.50.300 332 548 3.6E-52 T 14-10-2018 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SUPERFAMILY SSF58104 763 886 3.14E-11 T 14-10-2018 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SUPERFAMILY SSF55874 1144 1312 1.44E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Pfam PF00072 Response regulator receiver domain 1358 1470 1.3E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1088 1155 3.9E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Gene3D G3DSA:3.30.565.10 1154 1315 7.3E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Gene3D G3DSA:3.40.50.12740 1356 1478 5.5E-34 T 14-10-2018 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SMART SM00388 1087 1155 9.1E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Gene3D G3DSA:1.10.287.130 1052 1153 1.4E-24 T 14-10-2018 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Pfam PF13185 GAF domain 910 1042 9.9E-19 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SUPERFAMILY SSF58104 579 759 1.1E-12 T 14-10-2018 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SUPERFAMILY SSF47384 1073 1156 2.16E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SMART SM00065 911 1054 4.4E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Gene3D G3DSA:2.60.120.260 373 464 7.9E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Gene3D G3DSA:2.60.120.260 282 372 1.6E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Gene3D G3DSA:2.60.120.260 187 281 1.8E-7 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Gene3D G3DSA:2.60.120.260 465 557 3.3E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Gene3D G3DSA:2.60.120.260 742 844 1.3E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Gene3D G3DSA:2.60.120.260 558 648 4.7E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Gene3D G3DSA:2.60.120.260 649 741 1.4E-7 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SUPERFAMILY SSF58104 119 392 3.92E-16 T 14-10-2018 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1238 1252 3.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1256 1266 3.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1273 1291 3.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1297 1310 3.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SMART SM00304 467 519 9.6E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SMART SM00304 99 151 8.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SMART SM00304 283 335 2.1E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SMART SM00304 191 243 2.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SMART SM00304 6 58 60.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SMART SM00304 743 795 4.4E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SMART SM00304 651 703 5.7E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SMART SM00304 559 611 1.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SMART SM00304 375 427 1.1E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SMART SM00304 835 887 1.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Gene3D G3DSA:3.30.450.40 883 1048 2.5E-25 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SUPERFAMILY SSF55781 874 1042 1.73E-30 T 14-10-2018 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SMART SM00387 1202 1313 1.4E-41 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SUPERFAMILY SSF58104 395 575 1.1E-13 T 14-10-2018 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Pfam PF00672 HAMP domain 102 147 3.9E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Pfam PF00672 HAMP domain 378 422 2.0E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SMART SM00448 1356 1470 1.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1202 1312 9.9E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5091 c69870a443ea1b136960d74c19cd458a 1479 SUPERFAMILY SSF52172 1347 1475 6.4E-33 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2010 7235180ccab9ad7b6764c83c9ec89fb6 214 SUPERFAMILY SSF46894 143 210 2.62E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_2010 7235180ccab9ad7b6764c83c9ec89fb6 214 Pfam PF00072 Response regulator receiver domain 5 116 5.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2010 7235180ccab9ad7b6764c83c9ec89fb6 214 SMART SM00448 3 116 2.9E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2010 7235180ccab9ad7b6764c83c9ec89fb6 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 3.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2010 7235180ccab9ad7b6764c83c9ec89fb6 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 3.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2010 7235180ccab9ad7b6764c83c9ec89fb6 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 3.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2010 7235180ccab9ad7b6764c83c9ec89fb6 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2010 7235180ccab9ad7b6764c83c9ec89fb6 214 SMART SM00421 152 209 6.6E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2010 7235180ccab9ad7b6764c83c9ec89fb6 214 SUPERFAMILY SSF52172 3 132 3.13E-32 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2010 7235180ccab9ad7b6764c83c9ec89fb6 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 207 2.5E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2010 7235180ccab9ad7b6764c83c9ec89fb6 214 Gene3D G3DSA:3.40.50.12740 3 213 4.7E-64 T 14-10-2018 Amir_4822 5449dfc43ad18ad9d55bf8ce8a704fb7 261 Pfam PF01261 Xylose isomerase-like TIM barrel 24 213 9.2E-24 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Amir_4822 5449dfc43ad18ad9d55bf8ce8a704fb7 261 SUPERFAMILY SSF51658 6 258 4.06E-39 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Amir_4822 5449dfc43ad18ad9d55bf8ce8a704fb7 261 Gene3D G3DSA:3.20.20.150 2 254 1.8E-42 T 14-10-2018 Amir_0610 ef96bc0670d51ab1b9869aaa25446d43 276 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 4 178 5.2E-51 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amir_0610 ef96bc0670d51ab1b9869aaa25446d43 276 SUPERFAMILY SSF51735 4 180 2.27E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0610 ef96bc0670d51ab1b9869aaa25446d43 276 Gene3D G3DSA:1.10.1040.10 184 276 1.6E-30 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amir_0610 ef96bc0670d51ab1b9869aaa25446d43 276 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 181 276 2.3E-26 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amir_0610 ef96bc0670d51ab1b9869aaa25446d43 276 Gene3D G3DSA:3.40.50.720 2 183 1.5E-54 T 14-10-2018 Amir_0610 ef96bc0670d51ab1b9869aaa25446d43 276 SUPERFAMILY SSF48179 180 276 6.12E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_0610 ef96bc0670d51ab1b9869aaa25446d43 276 PIRSF PIRSF000105 2 276 4.2E-69 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 Amir_0513 0e77a49540137eb208db7bbace73d992 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 200 2.8E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0513 0e77a49540137eb208db7bbace73d992 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 6.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0513 0e77a49540137eb208db7bbace73d992 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 6.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0513 0e77a49540137eb208db7bbace73d992 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 6.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0513 0e77a49540137eb208db7bbace73d992 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0513 0e77a49540137eb208db7bbace73d992 209 SUPERFAMILY SSF46894 135 207 8.84E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_0513 0e77a49540137eb208db7bbace73d992 209 SMART SM00448 12 122 2.2E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0513 0e77a49540137eb208db7bbace73d992 209 Gene3D G3DSA:3.40.50.12740 12 207 2.6E-68 T 14-10-2018 Amir_0513 0e77a49540137eb208db7bbace73d992 209 SUPERFAMILY SSF52172 12 139 8.68E-35 T 14-10-2018 IPR011006 CheY-like superfamily Amir_0513 0e77a49540137eb208db7bbace73d992 209 SMART SM00421 144 201 4.0E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0513 0e77a49540137eb208db7bbace73d992 209 Pfam PF00072 Response regulator receiver domain 14 123 1.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0268 5e01fd4f4f2456b34e67e84dfccc515b 308 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 189 206 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 Amir_0268 5e01fd4f4f2456b34e67e84dfccc515b 308 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 8 299 34.892 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 Amir_0268 5e01fd4f4f2456b34e67e84dfccc515b 308 SUPERFAMILY SSF53697 14 253 1.0E-58 T 14-10-2018 Amir_0268 5e01fd4f4f2456b34e67e84dfccc515b 308 Gene3D G3DSA:3.40.50.10490 10 222 3.4E-71 T 14-10-2018 Amir_0268 5e01fd4f4f2456b34e67e84dfccc515b 308 Gene3D G3DSA:1.10.8.1080 223 301 1.6E-21 T 14-10-2018 Amir_0268 5e01fd4f4f2456b34e67e84dfccc515b 308 Pfam PF13580 SIS domain 52 166 5.1E-9 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Amir_0957 9418f1697812f4a9b9e9ee922835bd1b 523 SMART SM00220 10 278 1.0E-60 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_0957 9418f1697812f4a9b9e9ee922835bd1b 523 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 135 147 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_0957 9418f1697812f4a9b9e9ee922835bd1b 523 SUPERFAMILY SSF56112 6 278 2.16E-72 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_0957 9418f1697812f4a9b9e9ee922835bd1b 523 Pfam PF00069 Protein kinase domain 10 265 2.8E-46 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_0957 9418f1697812f4a9b9e9ee922835bd1b 523 Gene3D G3DSA:1.25.40.10 338 522 6.2E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0957 9418f1697812f4a9b9e9ee922835bd1b 523 Gene3D G3DSA:3.30.200.20 2 95 1.0E-25 T 14-10-2018 Amir_0957 9418f1697812f4a9b9e9ee922835bd1b 523 Gene3D G3DSA:1.10.510.10 97 278 7.3E-47 T 14-10-2018 Amir_0957 9418f1697812f4a9b9e9ee922835bd1b 523 SUPERFAMILY SSF48452 341 487 2.28E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 Pfam PF13424 Tetratricopeptide repeat 808 879 3.0E-13 T 14-10-2018 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 Pfam PF13424 Tetratricopeptide repeat 728 795 5.4E-10 T 14-10-2018 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 SMART SM00862 15 95 3.1E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 Pfam PF13176 Tetratricopeptide repeat 930 957 0.0016 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 Pfam PF03704 Bacterial transcriptional activator domain 102 246 3.7E-32 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 Gene3D G3DSA:1.25.40.10 705 981 6.7E-58 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 Gene3D G3DSA:1.25.40.10 982 1052 3.1E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 SMART SM01043 102 246 7.8E-38 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 SMART SM00028 728 761 0.47 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 SMART SM00028 808 841 0.018 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 SMART SM00028 928 961 0.061 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 SMART SM00028 888 921 81.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 SMART SM00028 848 881 14.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 SMART SM00028 1001 1034 47.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 SMART SM00028 768 801 6.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 Gene3D G3DSA:3.40.50.300 259 411 5.6E-22 T 14-10-2018 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 Pfam PF00486 Transcriptional regulatory protein, C terminal 23 95 4.3E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 PRINTS PR00364 Disease resistance protein signature 367 381 5.5E-8 T 14-10-2018 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 PRINTS PR00364 Disease resistance protein signature 473 487 5.5E-8 T 14-10-2018 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 PRINTS PR00364 Disease resistance protein signature 289 304 5.5E-8 T 14-10-2018 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 Gene3D G3DSA:1.10.10.10 1 97 2.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 SUPERFAMILY SSF48452 98 264 3.11E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 SUPERFAMILY SSF46894 4 95 7.65E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 SUPERFAMILY SSF48452 843 960 1.28E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 Gene3D G3DSA:1.25.40.10 100 258 1.2E-37 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 SUPERFAMILY SSF48452 724 883 1.04E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 SUPERFAMILY SSF52540 258 543 4.47E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2936 759d3e0a6cbadb69e6bc5d4e31006f4b 1054 SUPERFAMILY SSF48452 924 1034 2.32E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0302 10e43adb1e546d82f6519e76f33cbb6d 319 SMART SM00894 282 318 1.6E-19 T 14-10-2018 IPR008613 Excalibur calcium-binding domain Amir_0302 10e43adb1e546d82f6519e76f33cbb6d 319 Gene3D G3DSA:2.40.50.90 128 231 1.8E-6 T 14-10-2018 IPR035437 SNase-like, OB-fold superfamily Amir_0302 10e43adb1e546d82f6519e76f33cbb6d 319 SUPERFAMILY SSF50199 126 229 1.7E-9 T 14-10-2018 Amir_0302 10e43adb1e546d82f6519e76f33cbb6d 319 Pfam PF05901 Excalibur calcium-binding domain 283 318 2.0E-13 T 14-10-2018 IPR008613 Excalibur calcium-binding domain Amir_0755 bdf7f4ee2bcd5e9b44c3babc4499d142 267 SUPERFAMILY SSF55811 139 264 2.3E-28 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_0755 bdf7f4ee2bcd5e9b44c3babc4499d142 267 PRINTS PR00502 NUDIX hydrolase family signature 183 198 2.9E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_0755 bdf7f4ee2bcd5e9b44c3babc4499d142 267 PRINTS PR00502 NUDIX hydrolase family signature 169 183 2.9E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_0755 bdf7f4ee2bcd5e9b44c3babc4499d142 267 Gene3D G3DSA:3.90.79.10 139 265 1.8E-30 T 14-10-2018 Amir_0755 bdf7f4ee2bcd5e9b44c3babc4499d142 267 Pfam PF00293 NUDIX domain 141 259 8.8E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_2312 c3ae8fc4d23b4d12fbef90251c33f22e 549 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 487 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2312 c3ae8fc4d23b4d12fbef90251c33f22e 549 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 524 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2312 c3ae8fc4d23b4d12fbef90251c33f22e 549 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 543 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2312 c3ae8fc4d23b4d12fbef90251c33f22e 549 Gene3D G3DSA:3.30.450.20 81 204 8.1E-8 T 14-10-2018 Amir_2312 c3ae8fc4d23b4d12fbef90251c33f22e 549 Pfam PF00512 His Kinase A (phospho-acceptor) domain 326 390 6.7E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2312 c3ae8fc4d23b4d12fbef90251c33f22e 549 SMART SM00388 325 391 4.7E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2312 c3ae8fc4d23b4d12fbef90251c33f22e 549 Gene3D G3DSA:3.30.565.10 397 546 5.8E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2312 c3ae8fc4d23b4d12fbef90251c33f22e 549 SMART SM00387 436 546 2.1E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2312 c3ae8fc4d23b4d12fbef90251c33f22e 549 SUPERFAMILY SSF55874 380 544 1.7E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2312 c3ae8fc4d23b4d12fbef90251c33f22e 549 SUPERFAMILY SSF47384 311 392 9.22E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_2312 c3ae8fc4d23b4d12fbef90251c33f22e 549 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 436 543 7.0E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2312 c3ae8fc4d23b4d12fbef90251c33f22e 549 Pfam PF08447 PAS fold 109 158 5.1E-6 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Amir_2312 c3ae8fc4d23b4d12fbef90251c33f22e 549 SUPERFAMILY SSF55785 82 188 4.01E-9 T 14-10-2018 IPR035965 PAS domain superfamily Amir_2312 c3ae8fc4d23b4d12fbef90251c33f22e 549 SUPERFAMILY SSF55785 179 303 9.16E-5 T 14-10-2018 IPR035965 PAS domain superfamily Amir_2312 c3ae8fc4d23b4d12fbef90251c33f22e 549 Gene3D G3DSA:1.10.287.130 311 393 5.2E-21 T 14-10-2018 Amir_3533 6d474d3d56840af075077d2594f56657 1064 Pfam PF13191 AAA ATPase domain 5 153 4.8E-21 T 14-10-2018 Amir_3533 6d474d3d56840af075077d2594f56657 1064 SUPERFAMILY SSF52540 4 193 1.89E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3533 6d474d3d56840af075077d2594f56657 1064 Gene3D G3DSA:3.40.50.300 1 165 1.7E-7 T 14-10-2018 Amir_3533 6d474d3d56840af075077d2594f56657 1064 SMART SM00421 952 1009 3.8E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3533 6d474d3d56840af075077d2594f56657 1064 Gene3D G3DSA:1.10.10.10 901 1025 5.6E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3533 6d474d3d56840af075077d2594f56657 1064 SUPERFAMILY SSF46894 943 1006 2.31E-12 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_3533 6d474d3d56840af075077d2594f56657 1064 Gene3D G3DSA:1.25.40.10 508 694 2.9E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3533 6d474d3d56840af075077d2594f56657 1064 Pfam PF00196 Bacterial regulatory proteins, luxR family 955 1005 3.0E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1718 903844f8df402aaca887b57f23a4fe9d 397 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 339 349 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_1718 903844f8df402aaca887b57f23a4fe9d 397 SUPERFAMILY SSF54897 45 115 6.23E-16 T 14-10-2018 Amir_1718 903844f8df402aaca887b57f23a4fe9d 397 Gene3D G3DSA:3.40.50.200 118 394 1.6E-83 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_1718 903844f8df402aaca887b57f23a4fe9d 397 Pfam PF00082 Subtilase family 152 376 2.5E-32 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_1718 903844f8df402aaca887b57f23a4fe9d 397 SUPERFAMILY SSF52743 98 390 1.57E-69 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_1718 903844f8df402aaca887b57f23a4fe9d 397 PRINTS PR00723 Subtilisin serine protease family (S8) signature 147 166 1.1E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1718 903844f8df402aaca887b57f23a4fe9d 397 PRINTS PR00723 Subtilisin serine protease family (S8) signature 338 354 1.1E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1718 903844f8df402aaca887b57f23a4fe9d 397 PRINTS PR00723 Subtilisin serine protease family (S8) signature 185 198 1.1E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1718 903844f8df402aaca887b57f23a4fe9d 397 Pfam PF05922 Peptidase inhibitor I9 47 114 7.4E-11 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Amir_1718 903844f8df402aaca887b57f23a4fe9d 397 Gene3D G3DSA:3.30.70.80 37 114 3.0E-23 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Amir_1718 903844f8df402aaca887b57f23a4fe9d 397 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 152 163 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_3279 074506f0580e5e84d574f3bd7eb381b3 288 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 10 184 1.1E-45 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amir_3279 074506f0580e5e84d574f3bd7eb381b3 288 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 283 4.3E-29 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amir_3279 074506f0580e5e84d574f3bd7eb381b3 288 SUPERFAMILY SSF48179 186 285 3.06E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_3279 074506f0580e5e84d574f3bd7eb381b3 288 PIRSF PIRSF000105 5 288 7.8E-81 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 Amir_3279 074506f0580e5e84d574f3bd7eb381b3 288 Gene3D G3DSA:3.40.50.720 4 185 2.1E-48 T 14-10-2018 Amir_3279 074506f0580e5e84d574f3bd7eb381b3 288 Gene3D G3DSA:1.10.1040.10 189 288 5.2E-28 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amir_3279 074506f0580e5e84d574f3bd7eb381b3 288 SUPERFAMILY SSF51735 11 186 2.18E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5731 2c006cebd5f2259213a2e6f231085659 229 SUPERFAMILY SSF55811 9 137 1.07E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_5731 2c006cebd5f2259213a2e6f231085659 229 Gene3D G3DSA:1.10.10.10 139 217 1.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5731 2c006cebd5f2259213a2e6f231085659 229 Gene3D G3DSA:3.90.79.10 6 138 7.4E-28 T 14-10-2018 Amir_5731 2c006cebd5f2259213a2e6f231085659 229 Pfam PF00293 NUDIX domain 10 117 2.9E-7 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_5731 2c006cebd5f2259213a2e6f231085659 229 SUPERFAMILY SSF46785 141 212 1.96E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2667 6e0a513faf22a2768f9bd3e3047c9e2a 435 Gene3D G3DSA:1.20.1530.20 16 425 4.3E-91 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Amir_2667 6e0a513faf22a2768f9bd3e3047c9e2a 435 Pfam PF00999 Sodium/hydrogen exchanger family 24 414 1.7E-49 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Amir_2708 6f2ffb7e26e97dc0204ee752af04a667 257 SMART SM00382 29 212 3.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2708 6f2ffb7e26e97dc0204ee752af04a667 257 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_2708 6f2ffb7e26e97dc0204ee752af04a667 257 Pfam PF00005 ABC transporter 21 168 3.3E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2708 6f2ffb7e26e97dc0204ee752af04a667 257 Gene3D G3DSA:3.40.50.300 3 251 1.8E-67 T 14-10-2018 Amir_2708 6f2ffb7e26e97dc0204ee752af04a667 257 SUPERFAMILY SSF52540 8 225 1.92E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3770 8514494b1cb54504f8cc4e8f496b3f74 420 Pfam PF13347 MFS/sugar transport protein 11 410 2.5E-72 T 14-10-2018 Amir_3770 8514494b1cb54504f8cc4e8f496b3f74 420 Gene3D G3DSA:1.20.1250.20 213 418 9.6E-11 T 14-10-2018 Amir_3770 8514494b1cb54504f8cc4e8f496b3f74 420 Gene3D G3DSA:1.20.1250.20 5 197 6.6E-12 T 14-10-2018 Amir_3770 8514494b1cb54504f8cc4e8f496b3f74 420 SUPERFAMILY SSF103473 7 409 1.12E-32 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_3323 438b0db6b9a5b000ad55520535340126 208 SUPERFAMILY SSF109854 2 123 4.12E-12 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_3323 438b0db6b9a5b000ad55520535340126 208 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 9 92 3.6E-8 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 Amir_3323 438b0db6b9a5b000ad55520535340126 208 Gene3D G3DSA:1.20.120.450 3 98 6.5E-9 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_3323 438b0db6b9a5b000ad55520535340126 208 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 9 186 6.7E-23 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type Amir_0088 c031a154a737a124c2dbafec3a500176 400 Pfam PF04209 homogentisate 1,2-dioxygenase 123 380 1.3E-14 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 Amir_0088 c031a154a737a124c2dbafec3a500176 400 SUPERFAMILY SSF51182 6 394 7.54E-91 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_0088 c031a154a737a124c2dbafec3a500176 400 Gene3D G3DSA:2.60.120.10 276 371 4.5E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_0088 c031a154a737a124c2dbafec3a500176 400 Gene3D G3DSA:2.60.120.10 97 184 7.2E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 555 959 1.9E-113 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 Pfam PF13193 AMP-binding enzyme C-terminal domain 943 1020 3.8E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 Gene3D G3DSA:1.10.10.1830 14 67 7.2E-14 T 14-10-2018 Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 Pfam PF00501 AMP-binding enzyme 534 934 1.2E-81 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 Gene3D G3DSA:3.30.559.30 261 504 1.2E-123 T 14-10-2018 Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 SUPERFAMILY SSF47336 1043 1121 9.55E-14 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 Pfam PF00668 Condensation domain 79 506 3.5E-78 T 14-10-2018 IPR001242 Condensation domain Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 SUPERFAMILY SSF56801 529 1032 2.62E-122 T 14-10-2018 Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 Gene3D G3DSA:3.40.50.12780 526 929 5.7E-115 T 14-10-2018 Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 Gene3D G3DSA:3.30.559.10 79 450 1.2E-123 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 ProSitePatterns PS00455 Putative AMP-binding domain signature. 672 683 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 SUPERFAMILY SSF52777 263 509 1.56E-48 T 14-10-2018 Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 Pfam PF00550 Phosphopantetheine attachment site 1047 1112 4.2E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 SUPERFAMILY SSF52777 80 257 2.56E-45 T 14-10-2018 Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 Gene3D G3DSA:3.30.300.30 930 1039 2.2E-27 T 14-10-2018 Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 Gene3D G3DSA:1.10.1200.10 1040 1123 2.1E-17 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3681 0dd180d7bcb6cc2ee4b6ee300328a143 1142 SMART SM00823 Phosphopantetheine attachment site 1044 1116 4.6E-5 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_5425 52fff567ab2f0dd049f956efeb5d98cd 246 SUPERFAMILY SSF55174 7 65 3.14E-12 T 14-10-2018 Amir_5425 52fff567ab2f0dd049f956efeb5d98cd 246 SUPERFAMILY SSF55120 57 244 2.7E-45 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_5425 52fff567ab2f0dd049f956efeb5d98cd 246 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 108 122 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Amir_5425 52fff567ab2f0dd049f956efeb5d98cd 246 Pfam PF00849 RNA pseudouridylate synthase 72 203 3.0E-22 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_5425 52fff567ab2f0dd049f956efeb5d98cd 246 SMART SM00363 9 70 2.6E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_5425 52fff567ab2f0dd049f956efeb5d98cd 246 Gene3D G3DSA:3.10.290.10 3 66 1.4E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amir_5425 52fff567ab2f0dd049f956efeb5d98cd 246 Gene3D G3DSA:3.30.2350.10 67 246 5.0E-50 T 14-10-2018 Amir_5425 52fff567ab2f0dd049f956efeb5d98cd 246 Pfam PF01479 S4 domain 9 52 2.3E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_5425 52fff567ab2f0dd049f956efeb5d98cd 246 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 75 233 1.2E-42 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Amir_1254 bc9e11b732d40e4cfe8bec6003d6b36f 298 Pfam PF07650 KH domain 208 287 1.6E-15 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_1254 bc9e11b732d40e4cfe8bec6003d6b36f 298 SUPERFAMILY SSF52540 10 213 4.76E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1254 bc9e11b732d40e4cfe8bec6003d6b36f 298 SUPERFAMILY SSF54814 182 298 7.85E-35 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Amir_1254 bc9e11b732d40e4cfe8bec6003d6b36f 298 Gene3D G3DSA:3.30.300.20 185 298 4.9E-40 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Amir_1254 bc9e11b732d40e4cfe8bec6003d6b36f 298 Hamap MF_00367 GTPase Era [era]. 4 298 35.063 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_1254 bc9e11b732d40e4cfe8bec6003d6b36f 298 TIGRFAM TIGR00436 era: GTP-binding protein Era 7 281 9.3E-71 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_1254 bc9e11b732d40e4cfe8bec6003d6b36f 298 Pfam PF01926 50S ribosome-binding GTPase 9 124 1.8E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_1254 bc9e11b732d40e4cfe8bec6003d6b36f 298 Gene3D G3DSA:3.40.50.300 4 183 5.5E-44 T 14-10-2018 Amir_1254 bc9e11b732d40e4cfe8bec6003d6b36f 298 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 168 7.5E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amir_1088 669e08b79057ec6174420001cb1bcb98 471 Gene3D G3DSA:3.30.450.40 19 202 7.6E-49 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_1088 669e08b79057ec6174420001cb1bcb98 471 SMART SM00862 303 367 0.0017 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_1088 669e08b79057ec6174420001cb1bcb98 471 Pfam PF01590 GAF domain 83 199 1.8E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 Gene3D G3DSA:3.40.50.720 1716 2103 6.8E-96 T 14-10-2018 Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 SUPERFAMILY SSF52151 563 850 2.88E-62 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1354 1534 4.5E-61 T 14-10-2018 Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 Pfam PF00698 Acyl transferase domain 566 878 6.3E-54 T 14-10-2018 IPR014043 Acyl transferase Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 Gene3D G3DSA:3.30.70.3290 482 912 4.0E-145 T 14-10-2018 Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 SUPERFAMILY SSF53901 30 404 2.31E-101 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 34 282 9.6E-91 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 SMART SM00823 Phosphopantetheine attachment site 1637 1707 1.5E-21 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 SUPERFAMILY SSF51735 1180 1343 3.82E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 566 865 2.0E-100 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1662 1677 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 Gene3D G3DSA:3.40.366.10 564 868 4.0E-145 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 Gene3D G3DSA:3.40.50.720 1180 1604 2.3E-120 T 14-10-2018 Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 290 407 7.7E-42 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 410 530 7.2E-15 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 SUPERFAMILY SSF47336 1630 1710 1.96E-15 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 Pfam PF08659 KR domain 1354 1532 7.9E-63 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 Gene3D G3DSA:3.40.47.10 26 476 2.4E-187 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 SUPERFAMILY SSF51735 1349 1590 1.96E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 Gene3D G3DSA:1.10.1200.10 1617 1707 5.3E-24 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 Pfam PF08990 Erythronolide synthase docking 3 27 1.1E-10 T 14-10-2018 IPR015083 Polyketide synthase, docking domain GO:0016740|GO:0048037 Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 Pfam PF07993 Male sterility protein 1746 1978 4.9E-58 T 14-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 Gene3D G3DSA:3.10.129.110 919 1179 4.9E-51 T 14-10-2018 Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 SUPERFAMILY SSF55048 692 755 1.7E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 SMART SM00826 930 1072 2.9E-31 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 Pfam PF00550 Phosphopantetheine attachment site 1640 1702 4.6E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 SMART SM00825 Beta-ketoacyl synthase 36 460 3.3E-215 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 1744 2097 2.3E-89 T 14-10-2018 IPR010080 Thioester reductase-like domain Amir_4440 2f7d90e66b1d446d18757f56f56eb404 2107 SUPERFAMILY SSF51735 1744 2027 5.29E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2525 b276c3856b5b195e7ffb53524935a962 200 SUPERFAMILY SSF46689 13 87 7.48E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2525 b276c3856b5b195e7ffb53524935a962 200 Gene3D G3DSA:1.10.10.60 12 61 3.3E-21 T 14-10-2018 Amir_2525 b276c3856b5b195e7ffb53524935a962 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 37 68 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_2525 b276c3856b5b195e7ffb53524935a962 200 Gene3D G3DSA:1.10.357.10 63 200 5.5E-25 T 14-10-2018 Amir_2525 b276c3856b5b195e7ffb53524935a962 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 66 2.8E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 Pfam PF01588 Putative tRNA binding domain 47 148 1.1E-17 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 SMART SM00873 216 389 1.3E-84 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 SUPERFAMILY SSF50249 45 198 1.66E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 SUPERFAMILY SSF54991 730 824 4.45E-24 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 Gene3D G3DSA:3.30.56.10 7 184 6.9E-57 T 14-10-2018 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 Gene3D G3DSA:2.40.50.140 41 158 6.9E-57 T 14-10-2018 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 SMART SM00896 731 824 1.1E-37 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 Gene3D G3DSA:3.50.40.10 202 397 3.8E-74 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 Pfam PF03483 B3/4 domain 216 385 3.4E-65 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 Pfam PF03147 Ferredoxin-fold anticodon binding domain 731 824 1.3E-22 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 2 824 2.4E-172 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 Pfam PF03484 tRNA synthetase B5 domain 409 478 7.4E-11 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 SMART SM00874 405 478 5.9E-19 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 SUPERFAMILY SSF46955 407 482 7.78E-13 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 Gene3D G3DSA:3.30.70.380 733 825 1.0E-24 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 SUPERFAMILY SSF55681 474 719 6.46E-41 T 14-10-2018 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 818 39.303 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 Gene3D G3DSA:3.30.930.10 493 720 8.9E-52 T 14-10-2018 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 SUPERFAMILY SSF56037 202 401 1.67E-67 T 14-10-2018 Amir_5464 bf421e16c3abb570a6c30f445f6cb4b8 825 Gene3D G3DSA:3.30.56.10 405 482 3.0E-14 T 14-10-2018 Amir_0209 1505aa0ae22460d9f320c70d636ea151 331 SUPERFAMILY SSF52540 3 253 9.02E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0209 1505aa0ae22460d9f320c70d636ea151 331 SMART SM00382 33 231 5.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0209 1505aa0ae22460d9f320c70d636ea151 331 Gene3D G3DSA:3.40.50.300 1 327 5.1E-93 T 14-10-2018 Amir_0209 1505aa0ae22460d9f320c70d636ea151 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 318 2.0E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_0209 1505aa0ae22460d9f320c70d636ea151 331 Pfam PF00005 ABC transporter 25 182 1.9E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0209 1505aa0ae22460d9f320c70d636ea151 331 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0209 1505aa0ae22460d9f320c70d636ea151 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 299 1.2E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_2443 eb2a97415ba0149275d36f8d212ed6d1 229 SUPERFAMILY SSF48498 105 209 3.42E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_2443 eb2a97415ba0149275d36f8d212ed6d1 229 Pfam PF00440 Bacterial regulatory proteins, tetR family 41 86 7.7E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2443 eb2a97415ba0149275d36f8d212ed6d1 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 61 84 1.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2443 eb2a97415ba0149275d36f8d212ed6d1 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 54 1.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2443 eb2a97415ba0149275d36f8d212ed6d1 229 Gene3D G3DSA:1.10.357.10 21 215 2.5E-47 T 14-10-2018 Amir_2443 eb2a97415ba0149275d36f8d212ed6d1 229 SUPERFAMILY SSF46689 29 107 1.95E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3164 848142aa4e55cfeff8fc3871464a3106 114 Gene3D G3DSA:3.30.750.24 2 114 1.2E-27 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3164 848142aa4e55cfeff8fc3871464a3106 114 SUPERFAMILY SSF52091 10 110 7.26E-19 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3164 848142aa4e55cfeff8fc3871464a3106 114 Pfam PF01740 STAS domain 12 109 2.5E-12 T 14-10-2018 IPR002645 STAS domain Amir_3164 848142aa4e55cfeff8fc3871464a3106 114 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 9 108 4.5E-16 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Amir_1828 51aec240aca3cbb1bf797f7daf807a62 320 Gene3D G3DSA:3.40.50.1820 1 320 2.7E-81 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1828 51aec240aca3cbb1bf797f7daf807a62 320 SUPERFAMILY SSF53474 2 320 4.19E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1828 51aec240aca3cbb1bf797f7daf807a62 320 Pfam PF05448 Acetyl xylan esterase (AXE1) 1 314 1.0E-85 T 14-10-2018 IPR008391 Acetyl xylan esterase Amir_5691 988668c41fa5d2b1269423876f7e41cf 453 SUPERFAMILY SSF48371 174 332 3.17E-12 T 14-10-2018 IPR016024 Armadillo-type fold Amir_5691 988668c41fa5d2b1269423876f7e41cf 453 SUPERFAMILY SSF48371 53 200 4.43E-5 T 14-10-2018 IPR016024 Armadillo-type fold Amir_5691 988668c41fa5d2b1269423876f7e41cf 453 Gene3D G3DSA:1.25.10.10 275 449 1.2E-9 T 14-10-2018 IPR011989 Armadillo-like helical Amir_5691 988668c41fa5d2b1269423876f7e41cf 453 Gene3D G3DSA:1.25.10.10 149 274 5.8E-18 T 14-10-2018 IPR011989 Armadillo-like helical Amir_5004 82f12222d3bb70f10b5a30a4a8b62f37 162 Gene3D G3DSA:1.10.10.10 7 68 2.9E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5004 82f12222d3bb70f10b5a30a4a8b62f37 162 SMART SM00344 15 121 9.4E-32 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Amir_5004 82f12222d3bb70f10b5a30a4a8b62f37 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 15 62 4.4E-14 T 14-10-2018 Amir_5004 82f12222d3bb70f10b5a30a4a8b62f37 162 SUPERFAMILY SSF46785 15 74 2.27E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5004 82f12222d3bb70f10b5a30a4a8b62f37 162 Pfam PF01037 Lrp/AsnC ligand binding domain 84 151 3.6E-15 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Amir_5004 82f12222d3bb70f10b5a30a4a8b62f37 162 Gene3D G3DSA:3.30.70.920 69 155 4.6E-19 T 14-10-2018 Amir_5004 82f12222d3bb70f10b5a30a4a8b62f37 162 SUPERFAMILY SSF54909 77 155 4.56E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_5004 82f12222d3bb70f10b5a30a4a8b62f37 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 15 31 6.4E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_5004 82f12222d3bb70f10b5a30a4a8b62f37 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 42 61 6.4E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_5004 82f12222d3bb70f10b5a30a4a8b62f37 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 42 6.4E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_0275 e2039b8abaa45c37d17ea740754844cf 371 SUPERFAMILY SSF52540 142 352 2.02E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0275 e2039b8abaa45c37d17ea740754844cf 371 Gene3D G3DSA:3.40.50.300 140 369 1.5E-25 T 14-10-2018 Amir_0275 e2039b8abaa45c37d17ea740754844cf 371 TIGRFAM TIGR03815 CpaE_hom_Actino: helicase/secretion neighborhood CpaE-like protein 37 368 1.5E-95 T 14-10-2018 IPR022521 Conserved hypothetical protein CHP03815, CpaE-like Amir_0624 4619fdb3f169a460069570ab09b04cff 176 SUPERFAMILY SSF81330 10 122 4.32E-28 T 14-10-2018 IPR036019 Gated mechanosensitive channel Amir_0624 4619fdb3f169a460069570ab09b04cff 176 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 14-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site Amir_0624 4619fdb3f169a460069570ab09b04cff 176 Gene3D G3DSA:1.10.1200.120 1 129 2.6E-39 T 14-10-2018 IPR036019 Gated mechanosensitive channel Amir_0624 4619fdb3f169a460069570ab09b04cff 176 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 2 125 6.0E-38 T 14-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L Amir_0624 4619fdb3f169a460069570ab09b04cff 176 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 1.9E-8 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Amir_0624 4619fdb3f169a460069570ab09b04cff 176 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 88 97 1.9E-8 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Amir_0624 4619fdb3f169a460069570ab09b04cff 176 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 78 86 1.9E-8 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Amir_0624 4619fdb3f169a460069570ab09b04cff 176 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 2 126 2.6E-31 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Amir_0624 4619fdb3f169a460069570ab09b04cff 176 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 127 21.25 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Amir_0324 6ffdf37a36033762e2e93b48e51f44d0 297 Pfam PF10727 Rossmann-like domain 5 126 1.5E-45 T 14-10-2018 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain Amir_0324 6ffdf37a36033762e2e93b48e51f44d0 297 Gene3D G3DSA:1.10.1040.20 178 278 8.7E-16 T 14-10-2018 IPR037108 TM1727-like, C-terminal domain superfamily Amir_0324 6ffdf37a36033762e2e93b48e51f44d0 297 Gene3D G3DSA:3.40.50.720 10 176 3.6E-31 T 14-10-2018 Amir_0324 6ffdf37a36033762e2e93b48e51f44d0 297 SUPERFAMILY SSF51735 13 176 2.02E-20 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0324 6ffdf37a36033762e2e93b48e51f44d0 297 SUPERFAMILY SSF48179 179 278 1.05E-25 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_0324 6ffdf37a36033762e2e93b48e51f44d0 297 Pfam PF10728 Domain of unknown function (DUF2520) 147 272 6.6E-39 T 14-10-2018 IPR018931 Domain of unknown function DUF2520 Amir_5544 2ecf7e5282b1ee1f6f380ecf4cf101b2 154 Gene3D G3DSA:3.40.50.720 15 150 1.2E-35 T 14-10-2018 Amir_5544 2ecf7e5282b1ee1f6f380ecf4cf101b2 154 SUPERFAMILY SSF51735 21 147 1.13E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5544 2ecf7e5282b1ee1f6f380ecf4cf101b2 154 Pfam PF13380 CoA binding domain 32 146 7.7E-38 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Amir_5544 2ecf7e5282b1ee1f6f380ecf4cf101b2 154 SMART SM00881 28 120 1.6E-21 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Amir_0235 332f379345da3ed4fb9d41bd87340f60 830 Gene3D G3DSA:3.40.710.10 288 704 5.5E-70 T 14-10-2018 Amir_0235 332f379345da3ed4fb9d41bd87340f60 830 Gene3D G3DSA:3.30.10.20 714 774 1.2E-15 T 14-10-2018 Amir_0235 332f379345da3ed4fb9d41bd87340f60 830 Pfam PF00912 Transglycosylase 66 253 2.5E-60 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_0235 332f379345da3ed4fb9d41bd87340f60 830 SUPERFAMILY SSF56601 235 706 1.67E-72 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_0235 332f379345da3ed4fb9d41bd87340f60 830 SMART SM00740 710 773 2.9E-11 T 14-10-2018 IPR005543 PASTA domain Amir_0235 332f379345da3ed4fb9d41bd87340f60 830 Pfam PF00905 Penicillin binding protein transpeptidase domain 360 642 2.4E-23 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Amir_0235 332f379345da3ed4fb9d41bd87340f60 830 SUPERFAMILY SSF53955 55 275 8.72E-69 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Amir_0235 332f379345da3ed4fb9d41bd87340f60 830 Pfam PF03793 PASTA domain 715 773 6.5E-10 T 14-10-2018 IPR005543 PASTA domain Amir_0235 332f379345da3ed4fb9d41bd87340f60 830 Gene3D G3DSA:1.10.3810.10 59 269 6.4E-70 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_5783 69ed8b3634521265195daa54b9a4a00f 212 SUPERFAMILY SSF46785 138 211 8.06E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5783 69ed8b3634521265195daa54b9a4a00f 212 SMART SM00419 155 203 7.1E-8 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amir_5783 69ed8b3634521265195daa54b9a4a00f 212 Pfam PF13545 Crp-like helix-turn-helix domain 140 208 7.3E-18 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amir_5783 69ed8b3634521265195daa54b9a4a00f 212 Pfam PF00027 Cyclic nucleotide-binding domain 23 108 1.3E-17 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_5783 69ed8b3634521265195daa54b9a4a00f 212 SUPERFAMILY SSF51206 5 130 2.23E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Amir_5783 69ed8b3634521265195daa54b9a4a00f 212 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 161 177 6.5E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amir_5783 69ed8b3634521265195daa54b9a4a00f 212 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 177 192 6.5E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amir_5783 69ed8b3634521265195daa54b9a4a00f 212 Gene3D G3DSA:2.60.120.10 3 136 1.7E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_5783 69ed8b3634521265195daa54b9a4a00f 212 Gene3D G3DSA:1.10.10.10 138 212 1.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5783 69ed8b3634521265195daa54b9a4a00f 212 SMART SM00100 4 121 2.3E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_6532 e0b2c28a145591df26f6984de99d4bdf 562 Gene3D G3DSA:3.50.50.60 437 524 4.8E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6532 e0b2c28a145591df26f6984de99d4bdf 562 Gene3D G3DSA:3.50.50.60 186 349 2.6E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6532 e0b2c28a145591df26f6984de99d4bdf 562 Pfam PF05199 GMC oxidoreductase 463 520 5.8E-15 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Amir_6532 e0b2c28a145591df26f6984de99d4bdf 562 SUPERFAMILY SSF51905 9 524 1.21E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6532 e0b2c28a145591df26f6984de99d4bdf 562 Gene3D G3DSA:3.50.50.60 8 164 4.2E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6532 e0b2c28a145591df26f6984de99d4bdf 562 Pfam PF00732 GMC oxidoreductase 11 278 8.3E-15 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Amir_3037 7b810d1c84ef23642476e59d2c0938a9 467 Gene3D G3DSA:3.40.50.10420 154 289 1.6E-10 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Amir_3037 7b810d1c84ef23642476e59d2c0938a9 467 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 313 324 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amir_3037 7b810d1c84ef23642476e59d2c0938a9 467 SUPERFAMILY SSF46548 288 392 6.8E-14 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amir_3037 7b810d1c84ef23642476e59d2c0938a9 467 SUPERFAMILY SSF100950 69 295 8.79E-33 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Amir_3037 7b810d1c84ef23642476e59d2c0938a9 467 Pfam PF13183 4Fe-4S dicluster domain 311 377 2.8E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amir_3037 7b810d1c84ef23642476e59d2c0938a9 467 Pfam PF02589 LUD domain 75 291 5.4E-49 T 14-10-2018 IPR003741 LUD domain Amir_3037 7b810d1c84ef23642476e59d2c0938a9 467 Pfam PF11870 Domain of unknown function (DUF3390) 398 467 5.1E-11 T 14-10-2018 IPR024569 4Fe-4S binding protein, C-terminal Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 Pfam PF00550 Phosphopantetheine attachment site 581 644 2.0E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 Pfam PF00550 Phosphopantetheine attachment site 1641 1704 3.3E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 SUPERFAMILY SSF56801 1103 1651 1.2E-117 T 14-10-2018 Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 Gene3D G3DSA:3.30.300.30 1529 1626 1.1E-25 T 14-10-2018 Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 Gene3D G3DSA:3.30.559.10 661 1036 2.1E-79 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 Pfam PF13193 AMP-binding enzyme C-terminal domain 1543 1611 1.2E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 SUPERFAMILY SSF52777 861 1104 5.0E-38 T 14-10-2018 Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 Gene3D G3DSA:3.40.50.12780 1115 1528 2.1E-90 T 14-10-2018 Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 Pfam PF00668 Condensation domain 661 1086 8.1E-50 T 14-10-2018 IPR001242 Condensation domain Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 SUPERFAMILY SSF52777 661 834 1.45E-34 T 14-10-2018 Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 ProSitePatterns PS00455 Putative AMP-binding domain signature. 156 167 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 Gene3D G3DSA:3.30.559.30 837 1086 2.1E-79 T 14-10-2018 Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 SUPERFAMILY SSF47336 1636 1704 1.44E-13 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 Pfam PF00501 AMP-binding enzyme 13 412 1.3E-72 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 Pfam PF00501 AMP-binding enzyme 1124 1535 3.7E-65 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 SUPERFAMILY SSF56801 8 509 1.31E-101 T 14-10-2018 Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 SUPERFAMILY SSF47336 576 654 1.44E-11 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 Gene3D G3DSA:3.30.300.30 407 521 8.0E-28 T 14-10-2018 Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 Gene3D G3DSA:1.10.1200.10 1631 1714 3.4E-18 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 Gene3D G3DSA:1.10.1200.10 569 650 2.2E-10 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 SMART SM00823 Phosphopantetheine attachment site 579 648 3.3E-5 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 SMART SM00823 Phosphopantetheine attachment site 1639 1708 2.5E-10 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4912 a4087e0998c752cd39c3b8ffd0b0aa06 1715 Gene3D G3DSA:3.40.50.12780 7 404 1.0E-117 T 14-10-2018 Amir_6762 c7ac3476a9d98c8f73cc5ccaae26b22a 165 Pfam PF10698 Protein of unknown function (DUF2505) 9 161 3.9E-47 T 14-10-2018 IPR019639 Protein of unknown function DUF2505 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.50.720 5196 5282 4.8E-8 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF52151 3465 3674 9.42E-52 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF51735 4709 4899 1.1E-9 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.47.10 3930 3980 1.3E-5 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF55048 4313 4366 1.05E-7 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3345 3436 4.3E-14 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 4076 4168 1.4E-7 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 359 475 2.6E-13 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF53901 929 1262 1.58E-74 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF51735 2817 2965 2.45E-14 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF01370 NAD dependent epimerase/dehydratase family 5200 5276 8.6E-7 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SMART SM01294 3747 3813 0.0012 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.366.20 3392 3585 6.0E-58 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF51735 2353 2510 2.68E-11 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF52151 4194 4443 9.68E-49 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1066 1082 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2818 2976 1.4E-9 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF52151 1539 1784 2.25E-45 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF08659 KR domain 2818 2967 8.9E-16 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.366.10 1536 1784 5.8E-92 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.366.10 4447 4457 2.5E-8 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.366.10 499 753 2.0E-109 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.366.10 3593 3689 3.8E-30 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.366.10 4194 4443 1.7E-94 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SMART SM00823 Phosphopantetheine attachment site 3746 3817 7.6E-17 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.47.10 3039 3213 1.5E-47 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF51735 5008 5131 1.87E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:1.10.1200.10 3743 3818 1.9E-19 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.10.129.110 4509 4770 5.6E-49 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.10.129.110 2155 2353 8.2E-29 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.30.70.3290 1463 1535 5.8E-92 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.30.70.3290 3690 3728 3.8E-30 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.30.70.3290 4120 4193 1.7E-94 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.30.70.3290 424 498 2.0E-109 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.30.70.3290 4458 4496 2.5E-8 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.47.10 928 1307 1.3E-113 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.10.129.110 1854 2010 1.1E-24 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.50.720 5283 5383 4.8E-13 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SMART SM00826 4519 4663 1.2E-33 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SMART SM00826 1862 2249 7.3E-24 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF14765 Polyketide synthase dehydratase 2199 2346 1.8E-12 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF14765 Polyketide synthase dehydratase 4519 4767 8.2E-17 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF14765 Polyketide synthase dehydratase 1862 1992 6.3E-14 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.30.70.3290 767 808 3.6E-9 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.47.10 13 420 2.8E-132 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.47.10 3214 3390 1.8E-36 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 3469 3686 1.3E-27 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1539 1812 3.0E-62 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 4196 4468 4.9E-54 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 501 780 8.6E-74 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1155 1265 1.3E-27 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 245 356 1.1E-26 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3248 3335 1.1E-14 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.366.10 1786 1801 6.9E-11 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF00550 Phosphopantetheine attachment site 3752 3813 3.5E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF51735 2623 2749 2.3E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF47336 3747 3850 1.1E-15 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF50129 4915 5041 8.65E-22 T 14-10-2018 IPR011032 GroES-like superfamily Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.50.720 2814 3009 5.1E-19 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SMART SM00829 2527 2809 1.9E-84 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SMART SM00829 4915 5190 4.8E-66 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.30.70.3290 1802 1843 6.9E-11 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF51735 5199 5391 7.58E-13 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.47.10 3981 4044 4.3E-8 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF00698 Acyl transferase domain 501 747 7.1E-50 T 14-10-2018 IPR014043 Acyl transferase Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF00698 Acyl transferase domain 3469 3591 1.2E-29 T 14-10-2018 IPR014043 Acyl transferase Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF00698 Acyl transferase domain 1540 1781 5.9E-43 T 14-10-2018 IPR014043 Acyl transferase Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF00698 Acyl transferase domain 4196 4442 1.4E-40 T 14-10-2018 IPR014043 Acyl transferase Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.40.47.10 3819 3929 6.1E-23 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF55048 1654 1712 1.24E-8 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF53901 3039 3370 3.71E-53 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3930 4020 6.2E-5 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 23 234 1.3E-53 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 931 1147 2.6E-56 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3835 3927 1.4E-15 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3041 3209 4.4E-37 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SMART SM00825 Beta-ketoacyl synthase 3043 3376 3.3E-60 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SMART SM00825 Beta-ketoacyl synthase 3837 4105 2.9E-18 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SMART SM00825 Beta-ketoacyl synthase 24 410 1.4E-113 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SMART SM00825 Beta-ketoacyl synthase 933 1449 5.9E-98 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF55048 620 680 1.02E-7 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.90.180.10 4904 5194 9.1E-71 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 Gene3D G3DSA:3.90.180.10 2510 2813 1.2E-76 T 14-10-2018 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF53901 20 353 1.97E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF50129 2532 2651 3.62E-21 T 14-10-2018 IPR011032 GroES-like superfamily Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF53901 3834 4102 9.79E-32 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4019 1f13dfe89288b6b7594a4c665d3855e2 5526 SUPERFAMILY SSF52151 499 785 8.89E-58 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3975 ee1700bfdd07a5767c86f91ef92f9247 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 5.5E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3975 ee1700bfdd07a5767c86f91ef92f9247 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 5.5E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3975 ee1700bfdd07a5767c86f91ef92f9247 203 Gene3D G3DSA:1.10.357.10 65 194 1.2E-17 T 14-10-2018 Amir_3975 ee1700bfdd07a5767c86f91ef92f9247 203 Gene3D G3DSA:1.10.10.60 1 64 7.1E-18 T 14-10-2018 Amir_3975 ee1700bfdd07a5767c86f91ef92f9247 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 3.6E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3975 ee1700bfdd07a5767c86f91ef92f9247 203 SUPERFAMILY SSF48498 80 192 4.13E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3975 ee1700bfdd07a5767c86f91ef92f9247 203 SUPERFAMILY SSF46689 2 76 2.87E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5905 5507ebe3deacf618f074e067b8fb5a8f 245 SUPERFAMILY SSF53335 39 197 4.49E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_5905 5507ebe3deacf618f074e067b8fb5a8f 245 Pfam PF08241 Methyltransferase domain 56 150 8.3E-16 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_5905 5507ebe3deacf618f074e067b8fb5a8f 245 Gene3D G3DSA:3.40.50.150 17 241 1.9E-29 T 14-10-2018 Amir_2237 7667299263b94c1a46ef092fd432b095 169 ProSitePatterns PS00893 Nudix box signature. 66 87 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_2237 7667299263b94c1a46ef092fd432b095 169 Gene3D G3DSA:3.90.79.10 1 163 4.1E-42 T 14-10-2018 Amir_2237 7667299263b94c1a46ef092fd432b095 169 SUPERFAMILY SSF55811 2 161 5.63E-37 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_2237 7667299263b94c1a46ef092fd432b095 169 PIRSF PIRSF017340 1 164 7.6E-48 T 14-10-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 Amir_2237 7667299263b94c1a46ef092fd432b095 169 Pfam PF00293 NUDIX domain 29 146 4.0E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_2745 326738652442c636b7d373ebc3c9565c 522 SMART SM00283 318 518 2.6E-12 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_2745 326738652442c636b7d373ebc3c9565c 522 Gene3D G3DSA:3.30.450.40 20 187 2.6E-22 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_2745 326738652442c636b7d373ebc3c9565c 522 Gene3D G3DSA:3.30.450.40 210 333 1.4E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_2745 326738652442c636b7d373ebc3c9565c 522 SUPERFAMILY SSF55781 47 186 4.58E-17 T 14-10-2018 Amir_2745 326738652442c636b7d373ebc3c9565c 522 SUPERFAMILY SSF55781 198 359 7.2E-17 T 14-10-2018 Amir_2745 326738652442c636b7d373ebc3c9565c 522 SMART SM00065 214 365 1.8E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2745 326738652442c636b7d373ebc3c9565c 522 SMART SM00065 42 193 6.4E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2745 326738652442c636b7d373ebc3c9565c 522 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 383 504 4.7E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_2745 326738652442c636b7d373ebc3c9565c 522 Pfam PF13185 GAF domain 44 184 2.5E-16 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2745 326738652442c636b7d373ebc3c9565c 522 Pfam PF13185 GAF domain 212 355 4.6E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2745 326738652442c636b7d373ebc3c9565c 522 SUPERFAMILY SSF58104 347 519 5.62E-44 T 14-10-2018 Amir_2745 326738652442c636b7d373ebc3c9565c 522 Gene3D G3DSA:1.10.287.950 334 520 7.7E-42 T 14-10-2018 Amir_2112 cb84ff5e7e1701a0dc1f539d3c5bfd5e 177 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 3 175 7.6E-21 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type Amir_2112 cb84ff5e7e1701a0dc1f539d3c5bfd5e 177 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 3 119 3.4E-14 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 Amir_2112 cb84ff5e7e1701a0dc1f539d3c5bfd5e 177 TIGRFAM TIGR03086 TIGR03086: TIGR03086 family protein 3 175 1.1E-44 T 14-10-2018 IPR017520 Conserved hypothetical protein CHP03086 Amir_2112 cb84ff5e7e1701a0dc1f539d3c5bfd5e 177 Gene3D G3DSA:1.20.120.450 1 124 2.7E-9 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_2112 cb84ff5e7e1701a0dc1f539d3c5bfd5e 177 SUPERFAMILY SSF109854 3 125 3.16E-17 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 644 710 1.5E-9 T 14-10-2018 IPR001357 BRCT domain Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 Gene3D G3DSA:3.30.470.90 110 359 2.4E-100 T 14-10-2018 Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 Pfam PF12826 Helix-hairpin-helix motif 559 622 8.2E-15 T 14-10-2018 Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 SMART SM00532 45 491 2.3E-257 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 53 710 5.4E-230 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 450 477 2.1E-7 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 Gene3D G3DSA:2.40.50.140 360 431 2.8E-29 T 14-10-2018 Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 SUPERFAMILY SSF47781 445 632 3.48E-43 T 14-10-2018 IPR010994 RuvA domain 2-like Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 363 440 1.1E-30 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 46 360 9.7E-119 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 Gene3D G3DSA:1.10.287.610 36 109 3.5E-26 T 14-10-2018 Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 Gene3D G3DSA:1.10.150.20 475 553 7.0E-10 T 14-10-2018 Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 Gene3D G3DSA:2.20.70.80 433 472 8.8E-8 T 14-10-2018 Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 Hamap MF_01588 DNA ligase [ligA]. 44 715 48.424 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 PIRSF PIRSF001604 40 719 1.4E-225 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 SUPERFAMILY SSF50249 359 442 2.06E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 SUPERFAMILY SSF52113 644 717 9.35E-15 T 14-10-2018 IPR036420 BRCT domain superfamily Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 Gene3D G3DSA:1.10.150.20 554 630 2.2E-22 T 14-10-2018 Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 Gene3D G3DSA:3.40.50.10190 631 717 1.0E-20 T 14-10-2018 IPR036420 BRCT domain superfamily Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 SMART SM00292 641 718 7.0E-10 T 14-10-2018 IPR001357 BRCT domain Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 SUPERFAMILY SSF56091 44 358 8.64E-112 T 14-10-2018 Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 155 184 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site Amir_6038 dc4f0ef22dbedeb6bf31c7c63d099c66 816 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 373 388 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site Amir_0397 7a12990a71905cd7ea2e73e1f60514de 274 SUPERFAMILY SSF51556 2 274 7.99E-61 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_0397 7a12990a71905cd7ea2e73e1f60514de 274 Gene3D G3DSA:3.20.20.140 1 274 5.8E-78 T 14-10-2018 Amir_0397 7a12990a71905cd7ea2e73e1f60514de 274 Pfam PF04909 Amidohydrolase 3 274 5.9E-39 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_3511 970f1f88c174caf18cdc1f4d460f1f31 161 SMART SM00347 43 146 4.9E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_3511 970f1f88c174caf18cdc1f4d460f1f31 161 Gene3D G3DSA:1.10.10.10 2 161 8.3E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3511 970f1f88c174caf18cdc1f4d460f1f31 161 SUPERFAMILY SSF46785 10 159 1.48E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3511 970f1f88c174caf18cdc1f4d460f1f31 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 122 3.3E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_3511 970f1f88c174caf18cdc1f4d460f1f31 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 102 3.3E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_3511 970f1f88c174caf18cdc1f4d460f1f31 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 136 156 3.3E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_3511 970f1f88c174caf18cdc1f4d460f1f31 161 Pfam PF12802 MarR family 50 109 1.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0378 08e48cb3c45cbb2ac8c0fea1a7fe13ff 469 SUPERFAMILY SSF47384 235 313 5.1E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_0378 08e48cb3c45cbb2ac8c0fea1a7fe13ff 469 SMART SM00388 247 314 1.4E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_0378 08e48cb3c45cbb2ac8c0fea1a7fe13ff 469 SMART SM00304 180 239 2.7E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_0378 08e48cb3c45cbb2ac8c0fea1a7fe13ff 469 SUPERFAMILY SSF55874 304 469 6.42E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0378 08e48cb3c45cbb2ac8c0fea1a7fe13ff 469 Gene3D G3DSA:1.10.287.130 184 316 4.2E-25 T 14-10-2018 Amir_0378 08e48cb3c45cbb2ac8c0fea1a7fe13ff 469 Gene3D G3DSA:3.30.565.10 326 469 1.4E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0378 08e48cb3c45cbb2ac8c0fea1a7fe13ff 469 Pfam PF00672 HAMP domain 180 234 2.7E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_0378 08e48cb3c45cbb2ac8c0fea1a7fe13ff 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 468 7.0E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0378 08e48cb3c45cbb2ac8c0fea1a7fe13ff 469 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 313 1.1E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_0378 08e48cb3c45cbb2ac8c0fea1a7fe13ff 469 SMART SM00387 360 469 1.5E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0378 08e48cb3c45cbb2ac8c0fea1a7fe13ff 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 9.9E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_0378 08e48cb3c45cbb2ac8c0fea1a7fe13ff 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 9.9E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_0378 08e48cb3c45cbb2ac8c0fea1a7fe13ff 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 9.9E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_0378 08e48cb3c45cbb2ac8c0fea1a7fe13ff 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 9.9E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2113 2a734748f990f3961394e60878d2cd60 182 SUPERFAMILY SSF46689 2 69 1.69E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2113 2a734748f990f3961394e60878d2cd60 182 SUPERFAMILY SSF48498 79 177 3.87E-23 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_2113 2a734748f990f3961394e60878d2cd60 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 1.2E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2113 2a734748f990f3961394e60878d2cd60 182 Gene3D G3DSA:1.10.357.10 1 181 5.6E-52 T 14-10-2018 Amir_2113 2a734748f990f3961394e60878d2cd60 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 3.9E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2113 2a734748f990f3961394e60878d2cd60 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 3.9E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4635 2b938de2ceb475cb752b83194a160b39 137 Pfam PF10901 Protein of unknown function (DUF2690) 35 112 2.5E-5 T 14-10-2018 IPR021224 Protein of unknown function DUF2690 Amir_6592 979bc0b777be7042fc414a6d0921e23d 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 1.6E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_6592 979bc0b777be7042fc414a6d0921e23d 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 197 209 1.6E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_6592 979bc0b777be7042fc414a6d0921e23d 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 1.6E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_6592 979bc0b777be7042fc414a6d0921e23d 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 166 178 1.6E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_6592 979bc0b777be7042fc414a6d0921e23d 258 Pfam PF00557 Metallopeptidase family M24 11 246 4.1E-41 T 14-10-2018 IPR000994 Peptidase M24 Amir_6592 979bc0b777be7042fc414a6d0921e23d 258 SUPERFAMILY SSF55920 1 253 3.93E-75 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Amir_6592 979bc0b777be7042fc414a6d0921e23d 258 Gene3D G3DSA:3.90.230.10 1 257 4.7E-90 T 14-10-2018 Amir_6592 979bc0b777be7042fc414a6d0921e23d 258 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 172 190 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_6592 979bc0b777be7042fc414a6d0921e23d 258 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 254 5.0E-84 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_6592 979bc0b777be7042fc414a6d0921e23d 258 Hamap MF_01974 Methionine aminopeptidase [map]. 2 255 37.692 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_5001 bc15cd624e6f436744c22421e64577bd 443 Gene3D G3DSA:3.30.559.10 208 440 2.1E-71 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_5001 bc15cd624e6f436744c22421e64577bd 443 SUPERFAMILY SSF47005 160 197 4.05E-9 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Amir_5001 bc15cd624e6f436744c22421e64577bd 443 Pfam PF00364 Biotin-requiring enzyme 3 73 4.0E-15 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Amir_5001 bc15cd624e6f436744c22421e64577bd 443 Gene3D G3DSA:2.40.50.100 2 75 6.2E-20 T 14-10-2018 Amir_5001 bc15cd624e6f436744c22421e64577bd 443 Gene3D G3DSA:4.10.320.10 160 199 1.7E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Amir_5001 bc15cd624e6f436744c22421e64577bd 443 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Amir_5001 bc15cd624e6f436744c22421e64577bd 443 SUPERFAMILY SSF51230 3 92 3.14E-22 T 14-10-2018 IPR011053 Single hybrid motif Amir_5001 bc15cd624e6f436744c22421e64577bd 443 Pfam PF02817 e3 binding domain 162 195 2.6E-12 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Amir_5001 bc15cd624e6f436744c22421e64577bd 443 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 222 440 9.7E-65 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Amir_5001 bc15cd624e6f436744c22421e64577bd 443 SUPERFAMILY SSF52777 221 441 3.78E-66 T 14-10-2018 Amir_0720 98c9060292a3210cde73575e82404ab5 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 6 462 79.085 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Amir_0720 98c9060292a3210cde73575e82404ab5 464 PRINTS PR00149 Fumarate lyase superfamily signature 130 148 1.8E-29 T 14-10-2018 IPR000362 Fumarate lyase family Amir_0720 98c9060292a3210cde73575e82404ab5 464 PRINTS PR00149 Fumarate lyase superfamily signature 313 329 1.8E-29 T 14-10-2018 IPR000362 Fumarate lyase family Amir_0720 98c9060292a3210cde73575e82404ab5 464 PRINTS PR00149 Fumarate lyase superfamily signature 267 294 1.8E-29 T 14-10-2018 IPR000362 Fumarate lyase family Amir_0720 98c9060292a3210cde73575e82404ab5 464 PRINTS PR00149 Fumarate lyase superfamily signature 176 194 1.8E-29 T 14-10-2018 IPR000362 Fumarate lyase family Amir_0720 98c9060292a3210cde73575e82404ab5 464 Gene3D G3DSA:1.10.40.30 404 459 1.1E-25 T 14-10-2018 Amir_0720 98c9060292a3210cde73575e82404ab5 464 Pfam PF00206 Lyase 14 338 1.3E-96 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Amir_0720 98c9060292a3210cde73575e82404ab5 464 Gene3D G3DSA:1.10.275.10 7 134 5.5E-51 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Amir_0720 98c9060292a3210cde73575e82404ab5 464 ProSitePatterns PS00163 Fumarate lyases signature. 313 322 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Amir_0720 98c9060292a3210cde73575e82404ab5 464 PRINTS PR00145 Argininosuccinate lyase family signature 129 151 4.0E-6 T 14-10-2018 Amir_0720 98c9060292a3210cde73575e82404ab5 464 PRINTS PR00145 Argininosuccinate lyase family signature 171 191 4.0E-6 T 14-10-2018 Amir_0720 98c9060292a3210cde73575e82404ab5 464 PRINTS PR00145 Argininosuccinate lyase family signature 313 329 4.0E-6 T 14-10-2018 Amir_0720 98c9060292a3210cde73575e82404ab5 464 SUPERFAMILY SSF48557 6 459 5.18E-140 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Amir_0720 98c9060292a3210cde73575e82404ab5 464 Pfam PF10415 Fumarase C C-terminus 404 460 7.1E-21 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Amir_0720 98c9060292a3210cde73575e82404ab5 464 Gene3D G3DSA:1.20.200.10 135 403 5.0E-104 T 14-10-2018 Amir_5260 9e007aa0f2acfb31b613c1c3a3c8851f 432 Pfam PF02378 Phosphotransferase system, EIIC 25 329 3.2E-70 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Amir_1894 9aa9582ab9c2d31d1f84cb87fb90cf10 413 Gene3D G3DSA:3.40.50.1110 30 394 2.7E-32 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_1894 9aa9582ab9c2d31d1f84cb87fb90cf10 413 SUPERFAMILY SSF52266 35 392 2.83E-19 T 14-10-2018 Amir_6324 904208ace681695bbe15a1d5088d0674 407 SUPERFAMILY SSF51182 3 400 2.76E-99 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_6324 904208ace681695bbe15a1d5088d0674 407 PRINTS PR00714 Phosphomannose isomerase type I signature 82 103 1.0E-61 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Amir_6324 904208ace681695bbe15a1d5088d0674 407 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 1.0E-61 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Amir_6324 904208ace681695bbe15a1d5088d0674 407 PRINTS PR00714 Phosphomannose isomerase type I signature 245 264 1.0E-61 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Amir_6324 904208ace681695bbe15a1d5088d0674 407 PRINTS PR00714 Phosphomannose isomerase type I signature 283 302 1.0E-61 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Amir_6324 904208ace681695bbe15a1d5088d0674 407 PRINTS PR00714 Phosphomannose isomerase type I signature 127 150 1.0E-61 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Amir_6324 904208ace681695bbe15a1d5088d0674 407 PRINTS PR00714 Phosphomannose isomerase type I signature 229 244 1.0E-61 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Amir_6324 904208ace681695bbe15a1d5088d0674 407 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 1.0E-61 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Amir_6324 904208ace681695bbe15a1d5088d0674 407 PRINTS PR00714 Phosphomannose isomerase type I signature 264 283 1.0E-61 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Amir_6324 904208ace681695bbe15a1d5088d0674 407 Gene3D G3DSA:2.60.120.10 310 393 3.4E-132 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_6324 904208ace681695bbe15a1d5088d0674 407 Pfam PF01238 Phosphomannose isomerase type I 4 363 1.0E-63 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Amir_6324 904208ace681695bbe15a1d5088d0674 407 PIRSF PIRSF001480 1 406 1.2E-99 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Amir_6324 904208ace681695bbe15a1d5088d0674 407 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 396 3.0E-70 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Amir_6324 904208ace681695bbe15a1d5088d0674 407 Gene3D G3DSA:1.10.441.10 151 309 3.4E-132 T 14-10-2018 Amir_6324 904208ace681695bbe15a1d5088d0674 407 Gene3D G3DSA:2.60.120.10 6 284 3.4E-132 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_0733 b65356c38675270e135540cd055d796f 962 Gene3D G3DSA:3.40.50.300 737 961 4.6E-25 T 14-10-2018 Amir_0733 b65356c38675270e135540cd055d796f 962 Pfam PF13558 Putative exonuclease SbcCD, C subunit 861 920 1.4E-11 T 14-10-2018 Amir_0733 b65356c38675270e135540cd055d796f 962 Gene3D G3DSA:3.40.50.300 1 340 2.9E-35 T 14-10-2018 Amir_0733 b65356c38675270e135540cd055d796f 962 Pfam PF13476 AAA domain 5 182 9.8E-24 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain Amir_0733 b65356c38675270e135540cd055d796f 962 SUPERFAMILY SSF52540 2 950 1.3E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6662 880fc34cbd317e1ae8f30d6fae232a35 149 SUPERFAMILY SSF54909 64 147 1.61E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_6662 880fc34cbd317e1ae8f30d6fae232a35 149 SMART SM00344 4 111 3.2E-33 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Amir_6662 880fc34cbd317e1ae8f30d6fae232a35 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Amir_6662 880fc34cbd317e1ae8f30d6fae232a35 149 Gene3D G3DSA:3.30.70.920 55 144 2.7E-17 T 14-10-2018 Amir_6662 880fc34cbd317e1ae8f30d6fae232a35 149 Gene3D G3DSA:1.10.10.10 2 54 8.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6662 880fc34cbd317e1ae8f30d6fae232a35 149 Pfam PF13404 AsnC-type helix-turn-helix domain 5 44 2.5E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_6662 880fc34cbd317e1ae8f30d6fae232a35 149 Pfam PF01037 Lrp/AsnC ligand binding domain 70 141 6.2E-13 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Amir_6662 880fc34cbd317e1ae8f30d6fae232a35 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.8E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_6662 880fc34cbd317e1ae8f30d6fae232a35 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.8E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_6662 880fc34cbd317e1ae8f30d6fae232a35 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.8E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_6662 880fc34cbd317e1ae8f30d6fae232a35 149 SUPERFAMILY SSF46785 4 64 1.04E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6288 5da9f118a28f65b4fdc13f3ef41c3a48 325 Pfam PF00781 Diacylglycerol kinase catalytic domain 14 136 5.5E-25 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Amir_6288 5da9f118a28f65b4fdc13f3ef41c3a48 325 Gene3D G3DSA:3.40.50.10330 10 136 1.9E-31 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Amir_6288 5da9f118a28f65b4fdc13f3ef41c3a48 325 SUPERFAMILY SSF111331 13 325 2.22E-56 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Amir_6288 5da9f118a28f65b4fdc13f3ef41c3a48 325 SMART SM00046 13 142 4.3E-12 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Amir_6288 5da9f118a28f65b4fdc13f3ef41c3a48 325 Gene3D G3DSA:2.60.200.40 151 315 1.4E-19 T 14-10-2018 Amir_1277 74b846df26679a9c38393ea2d8a9e32e 76 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 10 65 4.8E-13 T 14-10-2018 IPR018691 Protein of unknown function DUF2188 Amir_4484 738a311a41f816e43749cca063e3b5be 140 SUPERFAMILY SSF54427 4 132 2.48E-19 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_4484 738a311a41f816e43749cca063e3b5be 140 Gene3D G3DSA:3.10.450.50 4 138 1.5E-27 T 14-10-2018 Amir_4484 738a311a41f816e43749cca063e3b5be 140 Pfam PF12680 SnoaL-like domain 10 120 1.6E-11 T 14-10-2018 IPR037401 SnoaL-like domain Amir_3621 1910d4c2e81aa778597465a6e9475745 567 Pfam PF00171 Aldehyde dehydrogenase family 174 342 1.5E-12 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_3621 1910d4c2e81aa778597465a6e9475745 567 SUPERFAMILY SSF53720 141 480 6.54E-26 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_3621 1910d4c2e81aa778597465a6e9475745 567 Gene3D G3DSA:3.40.309.10 282 465 4.4E-8 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_4159 a46baff660c941c30832174513812ece 275 SUPERFAMILY SSF48256 13 254 3.53E-50 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Amir_4159 a46baff660c941c30832174513812ece 275 Gene3D G3DSA:1.10.580.10 9 62 3.1E-7 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Amir_4159 a46baff660c941c30832174513812ece 275 Gene3D G3DSA:1.10.230.10 112 220 4.2E-30 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Amir_4159 a46baff660c941c30832174513812ece 275 Pfam PF00285 Citrate synthase, C-terminal domain 16 61 3.9E-5 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Amir_4159 a46baff660c941c30832174513812ece 275 Pfam PF00285 Citrate synthase, C-terminal domain 61 251 5.0E-28 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Amir_4159 a46baff660c941c30832174513812ece 275 Gene3D G3DSA:1.10.580.10 63 246 4.2E-30 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Amir_4402 59a831d349709001abe9e5bb8304a7ca 223 SUPERFAMILY SSF46785 9 79 3.27E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4402 59a831d349709001abe9e5bb8304a7ca 223 Gene3D G3DSA:1.20.120.530 83 221 1.2E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_4402 59a831d349709001abe9e5bb8304a7ca 223 Gene3D G3DSA:1.10.10.10 10 76 2.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4402 59a831d349709001abe9e5bb8304a7ca 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 6.4E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_4402 59a831d349709001abe9e5bb8304a7ca 223 SUPERFAMILY SSF48008 84 220 3.4E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_4402 59a831d349709001abe9e5bb8304a7ca 223 SMART SM00345 17 75 1.9E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_4402 59a831d349709001abe9e5bb8304a7ca 223 Pfam PF07729 FCD domain 85 213 1.9E-24 T 14-10-2018 IPR011711 GntR, C-terminal Amir_4402 59a831d349709001abe9e5bb8304a7ca 223 SMART SM00895 85 214 9.4E-16 T 14-10-2018 IPR011711 GntR, C-terminal Amir_0020 c202dd9667c3ea2d0b17d4e1e7062d58 213 SUPERFAMILY SSF52317 1 188 1.92E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_0020 c202dd9667c3ea2d0b17d4e1e7062d58 213 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 2.8E-6 T 14-10-2018 Amir_0020 c202dd9667c3ea2d0b17d4e1e7062d58 213 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 43 57 2.8E-6 T 14-10-2018 Amir_0020 c202dd9667c3ea2d0b17d4e1e7062d58 213 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 3.2E-13 T 14-10-2018 Amir_0020 c202dd9667c3ea2d0b17d4e1e7062d58 213 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 3.2E-13 T 14-10-2018 Amir_0020 c202dd9667c3ea2d0b17d4e1e7062d58 213 PRINTS PR00096 Glutamine amidotransferase superfamily signature 46 55 3.2E-13 T 14-10-2018 Amir_0020 c202dd9667c3ea2d0b17d4e1e7062d58 213 PRINTS PR00097 Anthranilate synthase component II signature 3 17 1.5E-34 T 14-10-2018 Amir_0020 c202dd9667c3ea2d0b17d4e1e7062d58 213 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.5E-34 T 14-10-2018 Amir_0020 c202dd9667c3ea2d0b17d4e1e7062d58 213 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.5E-34 T 14-10-2018 Amir_0020 c202dd9667c3ea2d0b17d4e1e7062d58 213 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.5E-34 T 14-10-2018 Amir_0020 c202dd9667c3ea2d0b17d4e1e7062d58 213 PRINTS PR00097 Anthranilate synthase component II signature 46 55 1.5E-34 T 14-10-2018 Amir_0020 c202dd9667c3ea2d0b17d4e1e7062d58 213 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.5E-34 T 14-10-2018 Amir_0020 c202dd9667c3ea2d0b17d4e1e7062d58 213 Pfam PF00117 Glutamine amidotransferase class-I 5 185 8.7E-49 T 14-10-2018 IPR017926 Glutamine amidotransferase Amir_0020 c202dd9667c3ea2d0b17d4e1e7062d58 213 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 185 8.0E-62 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amir_0020 c202dd9667c3ea2d0b17d4e1e7062d58 213 Gene3D G3DSA:3.40.50.880 1 191 6.3E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_1699 a931025131cad367803d2247b08903fd 281 Gene3D G3DSA:2.40.100.10 124 280 8.3E-50 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Amir_1699 a931025131cad367803d2247b08903fd 281 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 130 278 3.4E-31 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amir_1699 a931025131cad367803d2247b08903fd 281 SUPERFAMILY SSF50891 128 278 8.04E-44 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Amir_1699 a931025131cad367803d2247b08903fd 281 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 208 223 5.9E-9 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amir_1699 a931025131cad367803d2247b08903fd 281 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 223 235 5.9E-9 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amir_1699 a931025131cad367803d2247b08903fd 281 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 141 156 5.9E-9 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amir_4719 4186c2417440575a24728ba214b49c6c 564 SUPERFAMILY SSF53850 38 545 4.16E-103 T 14-10-2018 Amir_4719 4186c2417440575a24728ba214b49c6c 564 Gene3D G3DSA:3.10.105.10 314 531 1.4E-69 T 14-10-2018 Amir_4719 4186c2417440575a24728ba214b49c6c 564 PIRSF PIRSF002741 2 555 2.5E-74 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amir_4719 4186c2417440575a24728ba214b49c6c 564 Gene3D G3DSA:3.40.190.10 22 313 1.2E-50 T 14-10-2018 Amir_4719 4186c2417440575a24728ba214b49c6c 564 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 91 472 1.3E-78 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Amir_2529 29fc0ac047279c59db60bd003139cf09 1118 SUPERFAMILY SSF56300 777 1017 3.01E-25 T 14-10-2018 Amir_2529 29fc0ac047279c59db60bd003139cf09 1118 Gene3D G3DSA:3.60.21.10 765 1033 3.5E-20 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Amir_2529 29fc0ac047279c59db60bd003139cf09 1118 Pfam PF09992 Phosphodiester glycosidase 234 405 9.5E-34 T 14-10-2018 IPR018711 Phosphodiester glycosidase Amir_2529 29fc0ac047279c59db60bd003139cf09 1118 Pfam PF00149 Calcineurin-like phosphoesterase 780 972 1.5E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amir_7094 b26471b5ac076f6e27f151b137415d4b 223 Pfam PF02527 rRNA small subunit methyltransferase G 18 192 4.3E-51 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Amir_7094 b26471b5ac076f6e27f151b137415d4b 223 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 9 205 24.34 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Amir_7094 b26471b5ac076f6e27f151b137415d4b 223 Gene3D G3DSA:3.40.50.150 7 223 1.8E-59 T 14-10-2018 Amir_7094 b26471b5ac076f6e27f151b137415d4b 223 SUPERFAMILY SSF53335 15 210 6.78E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_7094 b26471b5ac076f6e27f151b137415d4b 223 PIRSF PIRSF003078 3 211 6.4E-48 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Amir_7094 b26471b5ac076f6e27f151b137415d4b 223 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 22 193 7.3E-41 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Amir_0297 4184fc2f1bf6ded0db869c4b3816dc6d 323 Gene3D G3DSA:3.40.50.1980 144 323 6.7E-37 T 14-10-2018 Amir_0297 4184fc2f1bf6ded0db869c4b3816dc6d 323 Gene3D G3DSA:3.40.50.1980 34 141 2.6E-24 T 14-10-2018 Amir_0297 4184fc2f1bf6ded0db869c4b3816dc6d 323 SUPERFAMILY SSF53807 38 318 5.89E-50 T 14-10-2018 Amir_0297 4184fc2f1bf6ded0db869c4b3816dc6d 323 Pfam PF01497 Periplasmic binding protein 57 297 1.3E-27 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Amir_4239 b3bdc85b9e375f48149c4a367b1b7505 268 Gene3D G3DSA:1.10.3720.10 5 259 3.1E-45 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4239 b3bdc85b9e375f48149c4a367b1b7505 268 SUPERFAMILY SSF161098 12 266 4.02E-48 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4239 b3bdc85b9e375f48149c4a367b1b7505 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 262 1.3E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Gene3D G3DSA:3.30.559.10 1061 1427 4.6E-146 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 479 885 2.9E-117 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1528 1927 1.3E-124 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1648 1659 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Pfam PF00501 AMP-binding enzyme 463 862 3.4E-87 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Pfam PF00501 AMP-binding enzyme 1515 1903 2.2E-92 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 SUPERFAMILY SSF52777 184 427 9.89E-48 T 14-10-2018 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 ProSitePatterns PS00012 Phosphopantetheine attachment site. 999 1014 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2031 2046 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 ProSitePatterns PS00455 Putative AMP-binding domain signature. 589 600 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Gene3D G3DSA:3.30.300.30 857 961 4.6E-33 T 14-10-2018 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 SUPERFAMILY SSF52777 17 178 9.78E-45 T 14-10-2018 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Gene3D G3DSA:3.30.559.30 1237 1480 4.6E-146 T 14-10-2018 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Pfam PF13193 AMP-binding enzyme C-terminal domain 1914 1982 5.3E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Pfam PF13193 AMP-binding enzyme C-terminal domain 870 948 1.9E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Gene3D G3DSA:3.40.50.12780 1511 1897 3.8E-125 T 14-10-2018 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Gene3D G3DSA:3.40.50.12780 459 856 3.8E-117 T 14-10-2018 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Pfam PF00668 Condensation domain 1060 1497 5.4E-94 T 14-10-2018 IPR001242 Condensation domain Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Pfam PF00668 Condensation domain 15 434 2.1E-82 T 14-10-2018 IPR001242 Condensation domain Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 SUPERFAMILY SSF56801 1514 2020 8.11E-142 T 14-10-2018 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 SUPERFAMILY SSF47336 2000 2072 7.07E-19 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Gene3D G3DSA:3.30.559.30 182 429 1.7E-124 T 14-10-2018 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 SUPERFAMILY SSF52777 1240 1485 3.22E-58 T 14-10-2018 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Pfam PF00550 Phosphopantetheine attachment site 2010 2071 6.5E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Pfam PF00550 Phosphopantetheine attachment site 977 1036 4.0E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 SMART SM00823 Phosphopantetheine attachment site 2007 2076 8.5E-6 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 SMART SM00823 Phosphopantetheine attachment site 975 1044 0.015 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Gene3D G3DSA:3.30.559.10 16 374 1.7E-124 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Gene3D G3DSA:3.30.300.30 1898 1993 1.7E-25 T 14-10-2018 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 SUPERFAMILY SSF47336 968 1037 4.19E-18 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 SUPERFAMILY SSF52777 1062 1233 6.89E-46 T 14-10-2018 Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Gene3D G3DSA:1.10.1200.10 962 1044 2.4E-25 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 Gene3D G3DSA:1.10.1200.10 1994 2078 1.5E-27 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3578 0d68e0a72df16bdb7f3a484b8c967e84 2098 SUPERFAMILY SSF56801 461 988 1.44E-140 T 14-10-2018 Amir_4844 ab932abf06d22c206184d37702c61b0e 434 SUPERFAMILY SSF53756 2 426 2.79E-79 T 14-10-2018 Amir_4844 ab932abf06d22c206184d37702c61b0e 434 Gene3D G3DSA:3.40.50.2000 242 410 1.4E-97 T 14-10-2018 Amir_4844 ab932abf06d22c206184d37702c61b0e 434 Gene3D G3DSA:3.40.50.2000 2 412 1.4E-97 T 14-10-2018 Amir_4844 ab932abf06d22c206184d37702c61b0e 434 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 266 392 2.1E-5 T 14-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 Amir_4844 ab932abf06d22c206184d37702c61b0e 434 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 51 1.5E-7 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_4211 826e2349cd5d85fd6332e0bd7c1368fc 429 Gene3D G3DSA:3.50.50.60 20 397 9.5E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4211 826e2349cd5d85fd6332e0bd7c1368fc 429 Pfam PF01494 FAD binding domain 23 197 5.5E-13 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_4211 826e2349cd5d85fd6332e0bd7c1368fc 429 SUPERFAMILY SSF51905 22 368 2.01E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4211 826e2349cd5d85fd6332e0bd7c1368fc 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 316 1.6E-8 T 14-10-2018 Amir_4211 826e2349cd5d85fd6332e0bd7c1368fc 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 173 188 1.6E-8 T 14-10-2018 Amir_4211 826e2349cd5d85fd6332e0bd7c1368fc 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 23 45 1.6E-8 T 14-10-2018 Amir_4211 826e2349cd5d85fd6332e0bd7c1368fc 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 316 332 1.6E-8 T 14-10-2018 Amir_5806 c5864d610d4a02b5c7ada6dc2e900cd2 559 Hamap MF_01491 Ribonuclease J [rnj]. 11 559 40.247 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 Amir_5806 c5864d610d4a02b5c7ada6dc2e900cd2 559 PIRSF PIRSF004803 10 559 2.7E-193 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 Amir_5806 c5864d610d4a02b5c7ada6dc2e900cd2 559 Gene3D G3DSA:3.60.15.10 17 442 9.8E-170 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_5806 c5864d610d4a02b5c7ada6dc2e900cd2 559 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 17 557 1.1E-145 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 Amir_5806 c5864d610d4a02b5c7ada6dc2e900cd2 559 Gene3D G3DSA:3.10.20.580 456 559 1.4E-16 T 14-10-2018 Amir_5806 c5864d610d4a02b5c7ada6dc2e900cd2 559 SUPERFAMILY SSF56281 16 430 1.52E-92 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_5806 c5864d610d4a02b5c7ada6dc2e900cd2 559 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 368 414 3.1E-9 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Amir_5806 c5864d610d4a02b5c7ada6dc2e900cd2 559 Pfam PF00753 Metallo-beta-lactamase superfamily 25 180 2.3E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_5806 c5864d610d4a02b5c7ada6dc2e900cd2 559 SMART SM00849 28 222 3.1E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_5806 c5864d610d4a02b5c7ada6dc2e900cd2 559 Gene3D G3DSA:3.40.50.10710 214 372 9.8E-170 T 14-10-2018 Amir_4414 7f256c48a0e7fad2fdd7ea477d8429bf 53 SUPERFAMILY SSF57829 1 33 1.59E-8 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Amir_4414 7f256c48a0e7fad2fdd7ea477d8429bf 53 Pfam PF01783 Ribosomal L32p protein family 2 47 3.8E-11 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_4414 7f256c48a0e7fad2fdd7ea477d8429bf 53 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 53 13.116 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_4414 7f256c48a0e7fad2fdd7ea477d8429bf 53 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 31 3.3E-10 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6209 6d71ea2f4d7d85f311533d531eae032d 343 SMART SM00388 124 188 2.2E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_6209 6d71ea2f4d7d85f311533d531eae032d 343 Pfam PF00512 His Kinase A (phospho-acceptor) domain 125 188 2.1E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_6209 6d71ea2f4d7d85f311533d531eae032d 343 Gene3D G3DSA:1.10.8.500 71 119 4.5E-8 T 14-10-2018 Amir_6209 6d71ea2f4d7d85f311533d531eae032d 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 232 336 2.6E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_6209 6d71ea2f4d7d85f311533d531eae032d 343 SMART SM00304 71 123 3.1E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_6209 6d71ea2f4d7d85f311533d531eae032d 343 Pfam PF00672 HAMP domain 73 117 1.5E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_6209 6d71ea2f4d7d85f311533d531eae032d 343 SUPERFAMILY SSF158472 73 119 3.27E-10 T 14-10-2018 Amir_6209 6d71ea2f4d7d85f311533d531eae032d 343 SUPERFAMILY SSF47384 107 188 1.0E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_6209 6d71ea2f4d7d85f311533d531eae032d 343 Gene3D G3DSA:1.10.287.130 120 187 2.6E-19 T 14-10-2018 Amir_6209 6d71ea2f4d7d85f311533d531eae032d 343 SUPERFAMILY SSF55874 178 337 2.62E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6209 6d71ea2f4d7d85f311533d531eae032d 343 SMART SM00387 231 338 7.1E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_6209 6d71ea2f4d7d85f311533d531eae032d 343 Gene3D G3DSA:3.30.565.10 192 336 2.7E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6209 6d71ea2f4d7d85f311533d531eae032d 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 6.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_6209 6d71ea2f4d7d85f311533d531eae032d 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 318 6.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_6209 6d71ea2f4d7d85f311533d531eae032d 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 6.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_3993 cd85f1c8b2630b5edd84b7fbb095821b 177 Pfam PF06271 RDD family 17 153 1.1E-16 T 14-10-2018 IPR010432 RDD Amir_5435 eefb92bf838c0d05d25ea39456c306e0 589 Hamap MF_01227 CTP synthase [pyrG]. 34 574 49.85 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Amir_5435 eefb92bf838c0d05d25ea39456c306e0 589 Pfam PF00117 Glutamine amidotransferase class-I 338 569 9.5E-47 T 14-10-2018 IPR017926 Glutamine amidotransferase Amir_5435 eefb92bf838c0d05d25ea39456c306e0 589 TIGRFAM TIGR00337 PyrG: CTP synthase 33 569 1.7E-226 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Amir_5435 eefb92bf838c0d05d25ea39456c306e0 589 SUPERFAMILY SSF52540 34 303 1.98E-117 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5435 eefb92bf838c0d05d25ea39456c306e0 589 SUPERFAMILY SSF52317 325 573 1.06E-73 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_5435 eefb92bf838c0d05d25ea39456c306e0 589 Pfam PF06418 CTP synthase N-terminus 35 303 3.0E-121 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Amir_5435 eefb92bf838c0d05d25ea39456c306e0 589 Gene3D G3DSA:3.40.50.300 27 322 2.7E-132 T 14-10-2018 Amir_5435 eefb92bf838c0d05d25ea39456c306e0 589 Gene3D G3DSA:3.40.50.880 323 576 3.1E-98 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_4703 ff1431553c0779d0caac1043c2c3cf05 393 SUPERFAMILY SSF56645 16 205 3.66E-28 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_4703 ff1431553c0779d0caac1043c2c3cf05 393 PIRSF PIRSF016578 1 393 6.9E-99 T 14-10-2018 Amir_4703 ff1431553c0779d0caac1043c2c3cf05 393 Gene3D G3DSA:1.10.540.10 3 113 1.5E-25 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_4703 ff1431553c0779d0caac1043c2c3cf05 393 Gene3D G3DSA:2.40.110.10 116 206 1.4E-24 T 14-10-2018 Amir_4703 ff1431553c0779d0caac1043c2c3cf05 393 SUPERFAMILY SSF47203 232 368 9.84E-10 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_4703 ff1431553c0779d0caac1043c2c3cf05 393 Gene3D G3DSA:1.20.140.10 215 392 4.5E-33 T 14-10-2018 Amir_4703 ff1431553c0779d0caac1043c2c3cf05 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 19 96 2.1E-5 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_4703 ff1431553c0779d0caac1043c2c3cf05 393 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 240 369 1.2E-23 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Amir_6219 850d100993fbab4e1e7d17f36661b943 596 Gene3D G3DSA:1.20.1260.20 28 186 5.2E-8 T 14-10-2018 IPR038332 PPE superfamily Amir_6219 850d100993fbab4e1e7d17f36661b943 596 SUPERFAMILY SSF140459 36 129 3.14E-6 T 14-10-2018 Amir_6952 409774e1bad46326eee901fa153018de 109 SUPERFAMILY SSF103481 5 106 1.01E-15 T 14-10-2018 Amir_6952 409774e1bad46326eee901fa153018de 109 Pfam PF00893 Small Multidrug Resistance protein 3 94 1.2E-24 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Amir_6952 409774e1bad46326eee901fa153018de 109 Gene3D G3DSA:1.10.3730.20 1 108 2.6E-31 T 14-10-2018 Amir_0848 c557d3f0d66d2f6b7a898f71924285a3 479 SUPERFAMILY SSF53187 19 468 2.8E-55 T 14-10-2018 Amir_0848 c557d3f0d66d2f6b7a898f71924285a3 479 Gene3D G3DSA:3.30.70.360 217 389 1.7E-132 T 14-10-2018 Amir_0848 c557d3f0d66d2f6b7a898f71924285a3 479 Pfam PF07687 Peptidase dimerisation domain 208 369 2.0E-19 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Amir_0848 c557d3f0d66d2f6b7a898f71924285a3 479 Pfam PF01546 Peptidase family M20/M25/M40 95 465 1.0E-29 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Amir_0848 c557d3f0d66d2f6b7a898f71924285a3 479 Gene3D G3DSA:3.40.630.10 29 461 1.7E-132 T 14-10-2018 Amir_4228 0f32ab4dc89e2a3da10543f5019b7047 536 Gene3D G3DSA:3.30.750.24 415 530 5.3E-23 T 14-10-2018 IPR036513 STAS domain superfamily Amir_4228 0f32ab4dc89e2a3da10543f5019b7047 536 SUPERFAMILY SSF52091 428 525 1.12E-14 T 14-10-2018 IPR036513 STAS domain superfamily Amir_4228 0f32ab4dc89e2a3da10543f5019b7047 536 Pfam PF01740 STAS domain 429 510 9.8E-12 T 14-10-2018 IPR002645 STAS domain Amir_4228 0f32ab4dc89e2a3da10543f5019b7047 536 Pfam PF00916 Sulfate permease family 17 375 3.2E-67 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Amir_0350 b58debf7ce061bc9703ba447e8f55345 297 SUPERFAMILY SSF161098 21 297 4.71E-68 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0350 b58debf7ce061bc9703ba447e8f55345 297 Gene3D G3DSA:1.10.3720.10 17 284 1.5E-59 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0350 b58debf7ce061bc9703ba447e8f55345 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 287 5.1E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0185 b6db7d11f1ffeec764bef7756bdaed74 311 SMART SM00530 11 66 2.1E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_0185 b6db7d11f1ffeec764bef7756bdaed74 311 SUPERFAMILY SSF56436 107 301 3.2E-53 T 14-10-2018 IPR016187 C-type lectin fold Amir_0185 b6db7d11f1ffeec764bef7756bdaed74 311 Gene3D G3DSA:3.90.1580.10 105 301 7.6E-50 T 14-10-2018 Amir_0185 b6db7d11f1ffeec764bef7756bdaed74 311 Pfam PF13560 Helix-turn-helix domain 9 56 5.0E-9 T 14-10-2018 Amir_0185 b6db7d11f1ffeec764bef7756bdaed74 311 Pfam PF03781 Sulfatase-modifying factor enzyme 1 119 300 3.4E-39 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Amir_0185 b6db7d11f1ffeec764bef7756bdaed74 311 SUPERFAMILY SSF47413 9 48 3.58E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_0185 b6db7d11f1ffeec764bef7756bdaed74 311 Gene3D G3DSA:1.10.260.40 11 72 5.9E-11 T 14-10-2018 Amir_2354 a681adb463497fb14c56a3201e4b9e95 386 SUPERFAMILY SSF64518 1 386 3.92E-93 T 14-10-2018 Amir_2354 a681adb463497fb14c56a3201e4b9e95 386 Gene3D G3DSA:1.10.8.410 336 386 6.6E-26 T 14-10-2018 Amir_2354 a681adb463497fb14c56a3201e4b9e95 386 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.0E-40 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Amir_2354 a681adb463497fb14c56a3201e4b9e95 386 Gene3D G3DSA:3.30.70.2120 174 283 5.5E-69 T 14-10-2018 Amir_2354 a681adb463497fb14c56a3201e4b9e95 386 PRINTS PR00207 Flagellin signature 37 54 7.9E-22 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Amir_2354 a681adb463497fb14c56a3201e4b9e95 386 PRINTS PR00207 Flagellin signature 112 135 7.9E-22 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Amir_2354 a681adb463497fb14c56a3201e4b9e95 386 PRINTS PR00207 Flagellin signature 76 95 7.9E-22 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Amir_2354 a681adb463497fb14c56a3201e4b9e95 386 Gene3D G3DSA:1.20.1330.10 44 335 5.5E-69 T 14-10-2018 Amir_2354 a681adb463497fb14c56a3201e4b9e95 386 Pfam PF00700 Bacterial flagellin C-terminal helical region 300 385 4.6E-30 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Amir_0308 7745987b2cac37f5852eb2487d0d6603 1016 Gene3D G3DSA:3.40.710.10 809 1001 4.5E-55 T 14-10-2018 Amir_0308 7745987b2cac37f5852eb2487d0d6603 1016 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 883 897 5.9E-21 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amir_0308 7745987b2cac37f5852eb2487d0d6603 1016 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 969 982 5.9E-21 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amir_0308 7745987b2cac37f5852eb2487d0d6603 1016 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 665 684 5.9E-21 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amir_0308 7745987b2cac37f5852eb2487d0d6603 1016 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 898 912 5.9E-21 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amir_0308 7745987b2cac37f5852eb2487d0d6603 1016 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 826 848 5.9E-21 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amir_0308 7745987b2cac37f5852eb2487d0d6603 1016 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 794 992 1.0E-46 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amir_0308 7745987b2cac37f5852eb2487d0d6603 1016 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 794 1009 1.1E-50 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amir_0308 7745987b2cac37f5852eb2487d0d6603 1016 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 631 784 5.6E-24 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amir_0308 7745987b2cac37f5852eb2487d0d6603 1016 Gene3D G3DSA:3.40.710.10 624 697 1.0E-5 T 14-10-2018 Amir_0308 7745987b2cac37f5852eb2487d0d6603 1016 SUPERFAMILY SSF56601 622 1009 5.46E-50 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_5315 92cf1afc095cc351f729392bb9f378e0 965 Gene3D G3DSA:3.40.50.300 1 182 4.5E-7 T 14-10-2018 Amir_5315 92cf1afc095cc351f729392bb9f378e0 965 Pfam PF13191 AAA ATPase domain 8 173 2.3E-19 T 14-10-2018 Amir_5315 92cf1afc095cc351f729392bb9f378e0 965 SMART SM00421 903 960 3.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5315 92cf1afc095cc351f729392bb9f378e0 965 SUPERFAMILY SSF52540 8 248 1.36E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5315 92cf1afc095cc351f729392bb9f378e0 965 Pfam PF00196 Bacterial regulatory proteins, luxR family 907 947 1.4E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5315 92cf1afc095cc351f729392bb9f378e0 965 SUPERFAMILY SSF46894 902 961 1.29E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_5315 92cf1afc095cc351f729392bb9f378e0 965 Gene3D G3DSA:1.10.10.10 840 964 4.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5943 a748d9b5d8c9923e6242c2a7c98a248a 257 Pfam PF09339 IclR helix-turn-helix domain 17 67 9.1E-18 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_5943 a748d9b5d8c9923e6242c2a7c98a248a 257 SUPERFAMILY SSF46785 15 86 3.42E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5943 a748d9b5d8c9923e6242c2a7c98a248a 257 Gene3D G3DSA:3.30.450.40 88 255 7.4E-53 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_5943 a748d9b5d8c9923e6242c2a7c98a248a 257 Pfam PF01614 Bacterial transcriptional regulator 130 249 1.5E-26 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Amir_5943 a748d9b5d8c9923e6242c2a7c98a248a 257 SUPERFAMILY SSF55781 72 251 4.64E-47 T 14-10-2018 Amir_5943 a748d9b5d8c9923e6242c2a7c98a248a 257 Gene3D G3DSA:1.10.10.10 8 83 5.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5943 a748d9b5d8c9923e6242c2a7c98a248a 257 SMART SM00346 15 102 3.1E-20 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_0908 06b35899f25b9f8874e3fc84f75f363f 571 SUPERFAMILY SSF56317 1 249 8.63E-62 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amir_0908 06b35899f25b9f8874e3fc84f75f363f 571 Pfam PF00795 Carbon-nitrogen hydrolase 5 250 1.4E-31 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Amir_0908 06b35899f25b9f8874e3fc84f75f363f 571 Gene3D G3DSA:3.40.50.620 294 571 3.4E-107 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_0908 06b35899f25b9f8874e3fc84f75f363f 571 Gene3D G3DSA:3.60.110.10 2 291 7.5E-100 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amir_0908 06b35899f25b9f8874e3fc84f75f363f 571 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 36 51 - T 14-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 Amir_0908 06b35899f25b9f8874e3fc84f75f363f 571 SUPERFAMILY SSF52402 285 553 4.68E-73 T 14-10-2018 Amir_0908 06b35899f25b9f8874e3fc84f75f363f 571 PIRSF PIRSF006630 1 571 2.7E-202 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Amir_0908 06b35899f25b9f8874e3fc84f75f363f 571 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 4 570 29.319 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Amir_0908 06b35899f25b9f8874e3fc84f75f363f 571 Pfam PF02540 NAD synthase 297 544 2.1E-68 T 14-10-2018 IPR022310 NAD/GMP synthase Amir_0908 06b35899f25b9f8874e3fc84f75f363f 571 TIGRFAM TIGR00552 nadE: NAD+ synthetase 300 550 5.9E-57 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Amir_5778 dfb10417fff3dc4cdcac83f190c64f83 815 Gene3D G3DSA:3.10.620.30 412 557 8.2E-22 T 14-10-2018 Amir_5778 dfb10417fff3dc4cdcac83f190c64f83 815 Pfam PF01841 Transglutaminase-like superfamily 427 543 5.2E-25 T 14-10-2018 IPR002931 Transglutaminase-like Amir_5778 dfb10417fff3dc4cdcac83f190c64f83 815 SMART SM00460 476 545 5.9E-20 T 14-10-2018 IPR002931 Transglutaminase-like Amir_5778 dfb10417fff3dc4cdcac83f190c64f83 815 SUPERFAMILY SSF54001 374 546 9.67E-30 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amir_5951 91cf138ff1086ac2285f8cbddfcab083 244 SUPERFAMILY SSF69593 20 194 4.18E-35 T 14-10-2018 Amir_5951 91cf138ff1086ac2285f8cbddfcab083 244 SMART SM00563 38 152 1.5E-29 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_5951 91cf138ff1086ac2285f8cbddfcab083 244 Pfam PF01553 Acyltransferase 23 149 3.4E-25 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_1174 081af3e324f50f1bcd53265efb40be14 278 PIRSF PIRSF006648 2 277 1.8E-25 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_1174 081af3e324f50f1bcd53265efb40be14 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 199 218 4.7E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_1174 081af3e324f50f1bcd53265efb40be14 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 219 238 4.7E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_1174 081af3e324f50f1bcd53265efb40be14 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 47 68 4.7E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_1174 081af3e324f50f1bcd53265efb40be14 278 Pfam PF01061 ABC-2 type transporter 33 241 6.1E-16 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 Pfam PF00330 Aconitase family (aconitate hydratase) 72 605 7.6E-179 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 Gene3D G3DSA:3.20.19.10 696 940 5.5E-102 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 SUPERFAMILY SSF53732 12 670 7.98E-222 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 ProSitePatterns PS01244 Aconitase family signature 2. 536 549 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 Pfam PF00694 Aconitase C-terminal domain 735 864 7.8E-43 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 PRINTS PR00415 Aconitase family signature 278 291 1.9E-42 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 PRINTS PR00415 Aconitase family signature 292 305 1.9E-42 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 PRINTS PR00415 Aconitase family signature 536 549 1.9E-42 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 PRINTS PR00415 Aconitase family signature 216 231 1.9E-42 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 PRINTS PR00415 Aconitase family signature 474 485 1.9E-42 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 PRINTS PR00415 Aconitase family signature 371 385 1.9E-42 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 PRINTS PR00415 Aconitase family signature 173 181 1.9E-42 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 PRINTS PR00415 Aconitase family signature 149 162 1.9E-42 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 PRINTS PR00415 Aconitase family signature 202 215 1.9E-42 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 Gene3D G3DSA:3.30.499.20 16 371 4.8E-155 T 14-10-2018 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 SUPERFAMILY SSF52016 674 938 1.31E-82 T 14-10-2018 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 Gene3D G3DSA:1.10.1440.20 635 695 1.6E-19 T 14-10-2018 Amir_2132 b9dd0fd9813af4c9f365af959406f91c 941 ProSitePatterns PS00450 Aconitase family signature 1. 470 486 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Amir_0389 d7c145e60cf17d13aac9706b6d6f4a98 330 Gene3D G3DSA:3.20.20.30 1 330 4.9E-79 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_0389 d7c145e60cf17d13aac9706b6d6f4a98 330 Pfam PF00296 Luciferase-like monooxygenase 14 294 7.3E-49 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_0389 d7c145e60cf17d13aac9706b6d6f4a98 330 SUPERFAMILY SSF51679 1 326 1.19E-74 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_5935 cc59a2215bc8179ef3dcd3dbfe936034 518 SUPERFAMILY SSF53474 84 456 4.2E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5935 cc59a2215bc8179ef3dcd3dbfe936034 518 Pfam PF08386 TAP-like protein 390 483 3.0E-19 T 14-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal Amir_5935 cc59a2215bc8179ef3dcd3dbfe936034 518 Pfam PF00561 alpha/beta hydrolase fold 87 275 7.4E-25 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_3009 7afcca0efd166c3def405a2f16544e7f 555 Pfam PF16657 Maltogenic Amylase, C-terminal domain 488 530 8.5E-10 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal Amir_3009 7afcca0efd166c3def405a2f16544e7f 555 Gene3D G3DSA:3.90.400.10 105 181 3.4E-196 T 14-10-2018 Amir_3009 7afcca0efd166c3def405a2f16544e7f 555 SUPERFAMILY SSF51011 488 554 6.24E-15 T 14-10-2018 Amir_3009 7afcca0efd166c3def405a2f16544e7f 555 SMART SM00642 13 427 5.6E-161 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_3009 7afcca0efd166c3def405a2f16544e7f 555 SUPERFAMILY SSF51445 4 484 4.23E-151 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_3009 7afcca0efd166c3def405a2f16544e7f 555 Gene3D G3DSA:2.60.40.1180 489 554 2.6E-13 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_3009 7afcca0efd166c3def405a2f16544e7f 555 Pfam PF00128 Alpha amylase, catalytic domain 28 384 4.5E-114 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_3009 7afcca0efd166c3def405a2f16544e7f 555 Gene3D G3DSA:3.20.20.80 4 480 3.4E-196 T 14-10-2018 Amir_5624 df7346f7058c3c91bc0d688b4745a7e3 63 Pfam PF04327 Cysteine protease Prp 10 54 5.1E-7 T 14-10-2018 IPR007422 Cysteine protease Prp Amir_5624 df7346f7058c3c91bc0d688b4745a7e3 63 Gene3D G3DSA:3.30.70.1490 2 63 4.9E-7 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily Amir_5624 df7346f7058c3c91bc0d688b4745a7e3 63 SUPERFAMILY SSF118010 9 60 1.83E-7 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily Amir_5902 539489421343d3b8bccbfa6ad92e5265 368 Gene3D G3DSA:1.10.150.530 18 74 2.1E-9 T 14-10-2018 Amir_5902 539489421343d3b8bccbfa6ad92e5265 368 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 20 366 4.8E-97 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Amir_5902 539489421343d3b8bccbfa6ad92e5265 368 SMART SM00729 117 342 0.0024 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amir_5902 539489421343d3b8bccbfa6ad92e5265 368 Pfam PF04055 Radical SAM superfamily 122 294 1.3E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_5902 539489421343d3b8bccbfa6ad92e5265 368 Gene3D G3DSA:3.20.20.70 81 355 1.3E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5902 539489421343d3b8bccbfa6ad92e5265 368 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 17 368 65.788 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Amir_5902 539489421343d3b8bccbfa6ad92e5265 368 PIRSF PIRSF006004 12 368 4.9E-118 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 Amir_5902 539489421343d3b8bccbfa6ad92e5265 368 SUPERFAMILY SSF102114 112 339 1.15E-17 T 14-10-2018 Amir_5705 4d60443122feae59c7c1e1f051b868ad 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 69 1.6E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5705 4d60443122feae59c7c1e1f051b868ad 220 Gene3D G3DSA:1.10.357.10 74 201 6.9E-41 T 14-10-2018 Amir_5705 4d60443122feae59c7c1e1f051b868ad 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 5.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5705 4d60443122feae59c7c1e1f051b868ad 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 5.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5705 4d60443122feae59c7c1e1f051b868ad 220 Gene3D G3DSA:1.10.10.60 12 72 1.8E-22 T 14-10-2018 Amir_5705 4d60443122feae59c7c1e1f051b868ad 220 SUPERFAMILY SSF48498 94 200 2.96E-28 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_5705 4d60443122feae59c7c1e1f051b868ad 220 SUPERFAMILY SSF46689 11 91 9.75E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_1951 fdbd64ad8a37ef0229062a2f2d9cfe89 132 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 4 38 5.3E-10 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Amir_1951 fdbd64ad8a37ef0229062a2f2d9cfe89 132 Pfam PF12728 Helix-turn-helix domain 4 52 5.0E-9 T 14-10-2018 Amir_1951 fdbd64ad8a37ef0229062a2f2d9cfe89 132 Gene3D G3DSA:1.10.1660.10 2 54 5.9E-10 T 14-10-2018 Amir_1951 fdbd64ad8a37ef0229062a2f2d9cfe89 132 Pfam PF03459 TOBE domain 65 125 6.9E-11 T 14-10-2018 IPR005116 Transport-associated OB, type 1 Amir_1951 fdbd64ad8a37ef0229062a2f2d9cfe89 132 SUPERFAMILY SSF50331 11 127 7.65E-17 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Amir_1951 fdbd64ad8a37ef0229062a2f2d9cfe89 132 Gene3D G3DSA:2.40.50.100 63 127 5.5E-17 T 14-10-2018 Amir_1120 04db387d61bcb93c774aef852b9ed6e5 396 Pfam PF07690 Major Facilitator Superfamily 9 316 5.6E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_1120 04db387d61bcb93c774aef852b9ed6e5 396 Gene3D G3DSA:1.20.1250.20 191 382 2.4E-21 T 14-10-2018 Amir_1120 04db387d61bcb93c774aef852b9ed6e5 396 Gene3D G3DSA:1.20.1250.20 5 185 2.9E-8 T 14-10-2018 Amir_1120 04db387d61bcb93c774aef852b9ed6e5 396 SUPERFAMILY SSF103473 6 382 3.79E-35 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2368 7e856203bc14670f677f2263658379af 403 PIRSF PIRSF036883 1 368 3.6E-57 T 14-10-2018 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative Amir_2368 7e856203bc14670f677f2263658379af 403 Pfam PF00072 Response regulator receiver domain 7 117 2.0E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2368 7e856203bc14670f677f2263658379af 403 SUPERFAMILY SSF109604 136 367 1.52E-41 T 14-10-2018 Amir_2368 7e856203bc14670f677f2263658379af 403 Gene3D G3DSA:3.40.50.2300 1 130 1.4E-27 T 14-10-2018 Amir_2368 7e856203bc14670f677f2263658379af 403 Gene3D G3DSA:1.10.3210.10 132 378 4.4E-49 T 14-10-2018 Amir_2368 7e856203bc14670f677f2263658379af 403 SUPERFAMILY SSF52172 5 139 1.71E-27 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2368 7e856203bc14670f677f2263658379af 403 Pfam PF08668 HDOD domain 142 333 1.4E-39 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD Amir_2368 7e856203bc14670f677f2263658379af 403 SMART SM00448 5 117 7.2E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3486 3eb44f420bfb9837414e05e9f8c5f1bf 314 SUPERFAMILY SSF46785 5 63 9.53E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3486 3eb44f420bfb9837414e05e9f8c5f1bf 314 Pfam PF08279 HTH domain 7 62 5.2E-16 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Amir_3486 3eb44f420bfb9837414e05e9f8c5f1bf 314 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Amir_3486 3eb44f420bfb9837414e05e9f8c5f1bf 314 Gene3D G3DSA:1.10.10.10 3 65 3.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3486 3eb44f420bfb9837414e05e9f8c5f1bf 314 PIRSF PIRSF016838 1 314 1.3E-20 T 14-10-2018 IPR028349 Protein PafC Amir_3486 3eb44f420bfb9837414e05e9f8c5f1bf 314 Pfam PF13280 WYL domain 139 308 5.2E-28 T 14-10-2018 IPR026881 WYL domain Amir_1857 4d381f25e2ddbcbac743d82f54630522 826 Gene3D G3DSA:2.60.120.560 586 760 1.5E-17 T 14-10-2018 Amir_1857 4d381f25e2ddbcbac743d82f54630522 826 SUPERFAMILY SSF49899 634 722 1.98E-8 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_1857 4d381f25e2ddbcbac743d82f54630522 826 Gene3D G3DSA:2.60.120.260 63 211 1.3E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_1857 4d381f25e2ddbcbac743d82f54630522 826 Gene3D G3DSA:3.20.20.80 212 537 3.0E-83 T 14-10-2018 Amir_1857 4d381f25e2ddbcbac743d82f54630522 826 SUPERFAMILY SSF49785 64 214 3.23E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_1857 4d381f25e2ddbcbac743d82f54630522 826 SUPERFAMILY SSF51445 200 542 1.23E-66 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1857 4d381f25e2ddbcbac743d82f54630522 826 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 464 814 2.4E-41 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 Amir_1857 4d381f25e2ddbcbac743d82f54630522 826 SMART SM00813 464 814 7.7E-51 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 Amir_1857 4d381f25e2ddbcbac743d82f54630522 826 Pfam PF02018 Carbohydrate binding domain 64 199 1.8E-9 T 14-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 Amir_6114 e8f0b0833221575584c3e38fe4c294bc 333 Gene3D G3DSA:3.40.50.10440 11 183 1.0E-63 T 14-10-2018 Amir_6114 e8f0b0833221575584c3e38fe4c294bc 333 Pfam PF02733 Dak1 domain 17 327 3.7E-125 T 14-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amir_6114 e8f0b0833221575584c3e38fe4c294bc 333 SUPERFAMILY SSF82549 11 332 6.54E-121 T 14-10-2018 Amir_6114 e8f0b0833221575584c3e38fe4c294bc 333 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 329 1.1E-142 T 14-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 Amir_6114 e8f0b0833221575584c3e38fe4c294bc 333 Gene3D G3DSA:3.30.1180.20 185 333 4.6E-50 T 14-10-2018 Amir_3418 e8433e630819a63dfbd149a446f463bd 185 Pfam PF13302 Acetyltransferase (GNAT) domain 18 160 1.7E-19 T 14-10-2018 IPR000182 GNAT domain Amir_3418 e8433e630819a63dfbd149a446f463bd 185 SUPERFAMILY SSF55729 10 169 2.05E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_3418 e8433e630819a63dfbd149a446f463bd 185 Gene3D G3DSA:3.40.630.30 6 175 3.0E-33 T 14-10-2018 Amir_5920 53267b0705273e4a0267b9c25692ef39 299 Pfam PF00717 Peptidase S24-like 67 113 5.2E-6 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Amir_5920 53267b0705273e4a0267b9c25692ef39 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 204 217 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Amir_5920 53267b0705273e4a0267b9c25692ef39 299 Pfam PF10502 Signal peptidase, peptidase S26 119 242 1.4E-7 T 14-10-2018 IPR019533 Peptidase S26 Amir_5920 53267b0705273e4a0267b9c25692ef39 299 Gene3D G3DSA:2.10.109.10 133 254 3.3E-21 T 14-10-2018 Amir_5920 53267b0705273e4a0267b9c25692ef39 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 199 218 2.1E-18 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amir_5920 53267b0705273e4a0267b9c25692ef39 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 148 160 2.1E-18 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amir_5920 53267b0705273e4a0267b9c25692ef39 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 60 76 2.1E-18 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amir_5920 53267b0705273e4a0267b9c25692ef39 299 SUPERFAMILY SSF51306 59 251 6.28E-38 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Amir_5920 53267b0705273e4a0267b9c25692ef39 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 46 244 6.2E-34 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amir_5920 53267b0705273e4a0267b9c25692ef39 299 Gene3D G3DSA:2.10.109.10 60 111 5.2E-5 T 14-10-2018 Amir_3285 0c8a5d9adf50bbd5b779601f0b943285 309 Pfam PF00480 ROK family 6 286 3.9E-37 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_3285 0c8a5d9adf50bbd5b779601f0b943285 309 Gene3D G3DSA:3.30.420.40 6 285 9.0E-53 T 14-10-2018 Amir_3285 0c8a5d9adf50bbd5b779601f0b943285 309 Gene3D G3DSA:3.30.420.40 120 273 9.0E-53 T 14-10-2018 Amir_3285 0c8a5d9adf50bbd5b779601f0b943285 309 SUPERFAMILY SSF53067 5 290 2.9E-38 T 14-10-2018 Amir_5281 20ab8cc5cc3fd4aca8f5973b4010fdbd 391 Gene3D G3DSA:3.30.565.10 241 386 3.0E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5281 20ab8cc5cc3fd4aca8f5973b4010fdbd 391 Pfam PF06580 Histidine kinase 186 264 7.1E-23 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Amir_5281 20ab8cc5cc3fd4aca8f5973b4010fdbd 391 SMART SM00387 275 385 5.5E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5281 20ab8cc5cc3fd4aca8f5973b4010fdbd 391 Gene3D G3DSA:3.30.450.40 54 189 7.6E-6 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_5281 20ab8cc5cc3fd4aca8f5973b4010fdbd 391 SUPERFAMILY SSF55781 64 180 6.38E-6 T 14-10-2018 Amir_5281 20ab8cc5cc3fd4aca8f5973b4010fdbd 391 Pfam PF13492 GAF domain 96 172 1.6E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_5281 20ab8cc5cc3fd4aca8f5973b4010fdbd 391 SUPERFAMILY SSF55874 242 382 2.36E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5281 20ab8cc5cc3fd4aca8f5973b4010fdbd 391 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 284 383 4.5E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_6432 4b36747b0a11e30bc6953190f46d547f 327 SUPERFAMILY SSF51735 2 156 5.14E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6432 4b36747b0a11e30bc6953190f46d547f 327 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 123 1.4E-24 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amir_6432 4b36747b0a11e30bc6953190f46d547f 327 Gene3D G3DSA:3.30.360.10 124 319 5.3E-46 T 14-10-2018 Amir_6432 4b36747b0a11e30bc6953190f46d547f 327 Gene3D G3DSA:3.40.50.720 2 123 2.6E-38 T 14-10-2018 Amir_6432 4b36747b0a11e30bc6953190f46d547f 327 SUPERFAMILY SSF55347 130 292 3.43E-33 T 14-10-2018 Amir_2522 32e8b2e7261fe42feb5d096be368971f 958 Pfam PF14559 Tetratricopeptide repeat 832 900 4.3E-7 T 14-10-2018 Amir_2522 32e8b2e7261fe42feb5d096be368971f 958 SUPERFAMILY SSF48452 831 903 1.0E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2522 32e8b2e7261fe42feb5d096be368971f 958 Gene3D G3DSA:1.25.40.10 707 878 7.3E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2522 32e8b2e7261fe42feb5d096be368971f 958 SUPERFAMILY SSF52540 272 479 2.04E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2522 32e8b2e7261fe42feb5d096be368971f 958 SUPERFAMILY SSF48452 730 811 1.77E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2522 32e8b2e7261fe42feb5d096be368971f 958 Gene3D G3DSA:3.40.50.300 261 420 1.3E-18 T 14-10-2018 Amir_2522 32e8b2e7261fe42feb5d096be368971f 958 Pfam PF13424 Tetratricopeptide repeat 738 802 1.3E-7 T 14-10-2018 Amir_2522 32e8b2e7261fe42feb5d096be368971f 958 SUPERFAMILY SSF53474 7 207 2.06E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3727 965e93cbb3e3b0b76aaba7643aca1500 810 SUPERFAMILY SSF52540 514 782 9.18E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3727 965e93cbb3e3b0b76aaba7643aca1500 810 Pfam PF00005 ABC transporter 522 729 5.4E-12 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3727 965e93cbb3e3b0b76aaba7643aca1500 810 SUPERFAMILY SSF52540 38 474 1.07E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3727 965e93cbb3e3b0b76aaba7643aca1500 810 SMART SM00382 57 468 2.5 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3727 965e93cbb3e3b0b76aaba7643aca1500 810 SMART SM00382 531 775 0.39 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3727 965e93cbb3e3b0b76aaba7643aca1500 810 Gene3D G3DSA:3.40.50.300 39 491 6.6E-154 T 14-10-2018 Amir_3727 965e93cbb3e3b0b76aaba7643aca1500 810 Gene3D G3DSA:1.20.1580.10 598 636 1.6E-102 T 14-10-2018 Amir_3727 965e93cbb3e3b0b76aaba7643aca1500 810 Gene3D G3DSA:3.40.50.300 516 805 1.6E-102 T 14-10-2018 Amir_3727 965e93cbb3e3b0b76aaba7643aca1500 810 Gene3D G3DSA:1.20.1580.10 125 391 6.6E-154 T 14-10-2018 Amir_3727 965e93cbb3e3b0b76aaba7643aca1500 810 Gene3D G3DSA:1.10.8.280 205 313 6.6E-154 T 14-10-2018 Amir_2597 9329baa7fdf9e9db1aa377b9ffca722b 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 68 1.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2597 9329baa7fdf9e9db1aa377b9ffca722b 218 Gene3D G3DSA:1.10.357.10 19 214 1.1E-31 T 14-10-2018 Amir_2597 9329baa7fdf9e9db1aa377b9ffca722b 218 SUPERFAMILY SSF46689 11 89 6.67E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4649 8806e2de9e10ec6ee3d82afdf8088ea0 426 Pfam PF07690 Major Facilitator Superfamily 40 261 7.0E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_4649 8806e2de9e10ec6ee3d82afdf8088ea0 426 Gene3D G3DSA:1.20.1250.20 32 215 1.8E-25 T 14-10-2018 Amir_4649 8806e2de9e10ec6ee3d82afdf8088ea0 426 SUPERFAMILY SSF103473 34 405 4.45E-47 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4649 8806e2de9e10ec6ee3d82afdf8088ea0 426 Gene3D G3DSA:1.20.1250.20 224 412 1.2E-15 T 14-10-2018 Amir_6366 eea8487acd4492e6e583bef76f3db4f9 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 384 1.3E-50 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_6366 eea8487acd4492e6e583bef76f3db4f9 387 Gene3D G3DSA:1.10.540.10 13 124 1.5E-39 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_6366 eea8487acd4492e6e583bef76f3db4f9 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amir_6366 eea8487acd4492e6e583bef76f3db4f9 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 223 1.0E-28 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amir_6366 eea8487acd4492e6e583bef76f3db4f9 387 SUPERFAMILY SSF47203 234 386 5.39E-59 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_6366 eea8487acd4492e6e583bef76f3db4f9 387 Gene3D G3DSA:2.40.110.10 125 239 3.8E-41 T 14-10-2018 Amir_6366 eea8487acd4492e6e583bef76f3db4f9 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 122 4.6E-31 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_6366 eea8487acd4492e6e583bef76f3db4f9 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 128 140 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amir_6366 eea8487acd4492e6e583bef76f3db4f9 387 SUPERFAMILY SSF56645 7 247 2.23E-76 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_6366 eea8487acd4492e6e583bef76f3db4f9 387 PIRSF PIRSF016578 6 105 1.7E-7 T 14-10-2018 Amir_6366 eea8487acd4492e6e583bef76f3db4f9 387 PIRSF PIRSF016578 129 386 2.1E-15 T 14-10-2018 Amir_6366 eea8487acd4492e6e583bef76f3db4f9 387 Gene3D G3DSA:1.20.140.10 240 387 2.4E-56 T 14-10-2018 Amir_2195 5cdada5a4ff1700b12a894e2aae33355 156 PRINTS PR00502 NUDIX hydrolase family signature 61 76 3.9E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_2195 5cdada5a4ff1700b12a894e2aae33355 156 PRINTS PR00502 NUDIX hydrolase family signature 47 61 3.9E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_2195 5cdada5a4ff1700b12a894e2aae33355 156 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_2195 5cdada5a4ff1700b12a894e2aae33355 156 SUPERFAMILY SSF55811 26 134 2.44E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_2195 5cdada5a4ff1700b12a894e2aae33355 156 Gene3D G3DSA:3.90.79.10 24 139 4.6E-24 T 14-10-2018 Amir_2195 5cdada5a4ff1700b12a894e2aae33355 156 Pfam PF00293 NUDIX domain 29 131 4.7E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_2254 df51dc783dc10218b82d8597fe4e7481 996 Gene3D G3DSA:1.10.3380.30 799 988 8.9E-14 T 14-10-2018 Amir_2254 df51dc783dc10218b82d8597fe4e7481 996 Pfam PF00271 Helicase conserved C-terminal domain 354 433 2.0E-4 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_2254 df51dc783dc10218b82d8597fe4e7481 996 Gene3D G3DSA:3.40.50.300 7 208 5.1E-65 T 14-10-2018 Amir_2254 df51dc783dc10218b82d8597fe4e7481 996 Pfam PF00270 DEAD/DEAH box helicase 37 184 3.2E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amir_2254 df51dc783dc10218b82d8597fe4e7481 996 SMART SM00487 31 213 2.0E-32 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_2254 df51dc783dc10218b82d8597fe4e7481 996 SMART SM00490 343 433 4.1E-13 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_2254 df51dc783dc10218b82d8597fe4e7481 996 SMART SM01142 820 995 2.1E-65 T 14-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal Amir_2254 df51dc783dc10218b82d8597fe4e7481 996 Gene3D G3DSA:3.40.50.300 209 464 1.1E-55 T 14-10-2018 Amir_2254 df51dc783dc10218b82d8597fe4e7481 996 SUPERFAMILY SSF52540 45 446 5.58E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2254 df51dc783dc10218b82d8597fe4e7481 996 Pfam PF08148 DSHCT (NUC185) domain 824 991 7.6E-39 T 14-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal Amir_2811 e55c9b3918cea02da2ff271adb5938c5 217 Pfam PF00072 Response regulator receiver domain 14 114 2.9E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2811 e55c9b3918cea02da2ff271adb5938c5 217 SMART SM00448 1 114 2.6E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2811 e55c9b3918cea02da2ff271adb5938c5 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2811 e55c9b3918cea02da2ff271adb5938c5 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 7.6E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2811 e55c9b3918cea02da2ff271adb5938c5 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 7.6E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2811 e55c9b3918cea02da2ff271adb5938c5 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 7.6E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2811 e55c9b3918cea02da2ff271adb5938c5 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 206 8.1E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2811 e55c9b3918cea02da2ff271adb5938c5 217 Gene3D G3DSA:3.40.50.12740 10 214 1.0E-58 T 14-10-2018 Amir_2811 e55c9b3918cea02da2ff271adb5938c5 217 SUPERFAMILY SSF52172 15 179 5.52E-26 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2811 e55c9b3918cea02da2ff271adb5938c5 217 SMART SM00421 151 208 5.5E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4495 852aa36e5e006d72f1fdebed4fc96376 559 Pfam PF00550 Phosphopantetheine attachment site 488 552 3.2E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4495 852aa36e5e006d72f1fdebed4fc96376 559 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 112 401 9.5E-97 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_4495 852aa36e5e006d72f1fdebed4fc96376 559 Gene3D G3DSA:3.40.50.1820 475 559 8.6E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4495 852aa36e5e006d72f1fdebed4fc96376 559 SMART SM00823 Phosphopantetheine attachment site 487 556 6.5E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4495 852aa36e5e006d72f1fdebed4fc96376 559 Gene3D G3DSA:3.30.300.30 372 472 1.0E-31 T 14-10-2018 Amir_4495 852aa36e5e006d72f1fdebed4fc96376 559 SUPERFAMILY SSF47336 479 552 3.14E-19 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4495 852aa36e5e006d72f1fdebed4fc96376 559 Pfam PF00501 AMP-binding enzyme 114 377 3.6E-66 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4495 852aa36e5e006d72f1fdebed4fc96376 559 Pfam PF00501 AMP-binding enzyme 8 96 3.8E-17 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4495 852aa36e5e006d72f1fdebed4fc96376 559 SUPERFAMILY SSF56801 2 499 1.03E-139 T 14-10-2018 Amir_4495 852aa36e5e006d72f1fdebed4fc96376 559 Pfam PF13193 AMP-binding enzyme C-terminal domain 385 458 1.9E-13 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_4495 852aa36e5e006d72f1fdebed4fc96376 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 124 135 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4495 852aa36e5e006d72f1fdebed4fc96376 559 Gene3D G3DSA:3.40.50.12780 1 371 5.3E-124 T 14-10-2018 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3273 3313 5.0E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 784 833 1.5E-5 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2416 2446 2.4E-4 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1286 1334 1.1E-6 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1919 1957 1.2E-6 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 678 714 1.7E-5 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 916 959 2.1E-10 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1668 1713 3.4E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 536 586 2.9E-10 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 388 432 4.5E-10 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3751 3801 1.1E-13 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1040 1084 9.9E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1416 1456 3.0E-6 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1540 1589 2.2E-7 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3515 3555 1.7E-7 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 Gene3D G3DSA:2.60.40.740 370 512 4.3E-8 T 14-10-2018 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 Pfam PF01345 Domain of unknown function DUF11 1282 1375 4.4E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 Pfam PF01345 Domain of unknown function DUF11 784 862 5.1E-7 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 Pfam PF01345 Domain of unknown function DUF11 534 617 3.1E-11 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 Pfam PF01345 Domain of unknown function DUF11 1038 1119 1.7E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 Pfam PF01345 Domain of unknown function DUF11 3515 3601 1.7E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 Pfam PF01345 Domain of unknown function DUF11 667 737 2.8E-6 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 Pfam PF01345 Domain of unknown function DUF11 912 990 3.8E-11 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 Pfam PF01345 Domain of unknown function DUF11 3271 3344 6.9E-10 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 Pfam PF01345 Domain of unknown function DUF11 1412 1499 7.2E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 Pfam PF01345 Domain of unknown function DUF11 377 501 2.2E-12 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 Pfam PF01345 Domain of unknown function DUF11 1919 1997 9.4E-8 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 Pfam PF01345 Domain of unknown function DUF11 3749 3839 1.2E-14 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 Pfam PF01345 Domain of unknown function DUF11 1539 1629 8.0E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 Pfam PF01345 Domain of unknown function DUF11 2409 2486 3.8E-7 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_2481 5279bd6dbdfdb080d03e083c5d5128b2 3921 Pfam PF01345 Domain of unknown function DUF11 1664 1756 2.7E-8 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Amir_1411 7b9331c606e214c3802f30db134a210f 212 SMART SM00895 81 204 3.2E-5 T 14-10-2018 IPR011711 GntR, C-terminal Amir_1411 7b9331c606e214c3802f30db134a210f 212 Gene3D G3DSA:1.10.10.10 8 73 8.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1411 7b9331c606e214c3802f30db134a210f 212 SUPERFAMILY SSF46785 6 75 2.35E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1411 7b9331c606e214c3802f30db134a210f 212 SMART SM00345 13 71 8.8E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1411 7b9331c606e214c3802f30db134a210f 212 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.1E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1411 7b9331c606e214c3802f30db134a210f 212 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.1E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1411 7b9331c606e214c3802f30db134a210f 212 Gene3D G3DSA:1.20.120.530 75 209 4.7E-15 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_1411 7b9331c606e214c3802f30db134a210f 212 SUPERFAMILY SSF48008 79 208 1.46E-15 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_1411 7b9331c606e214c3802f30db134a210f 212 Pfam PF07729 FCD domain 85 200 5.2E-15 T 14-10-2018 IPR011711 GntR, C-terminal Amir_1411 7b9331c606e214c3802f30db134a210f 212 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 4.8E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_6104 930de47ae380c54a76c2d5569cb4e486 397 SUPERFAMILY SSF53901 6 271 1.08E-82 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_6104 930de47ae380c54a76c2d5569cb4e486 397 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Amir_6104 930de47ae380c54a76c2d5569cb4e486 397 Pfam PF02803 Thiolase, C-terminal domain 272 392 5.5E-41 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Amir_6104 930de47ae380c54a76c2d5569cb4e486 397 Pfam PF00108 Thiolase, N-terminal domain 6 264 7.6E-97 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Amir_6104 930de47ae380c54a76c2d5569cb4e486 397 PIRSF PIRSF000429 2 395 5.6E-116 T 14-10-2018 IPR002155 Thiolase GO:0016747 Amir_6104 930de47ae380c54a76c2d5569cb4e486 397 Gene3D G3DSA:3.40.47.10 127 391 9.5E-139 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_6104 930de47ae380c54a76c2d5569cb4e486 397 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 391 1.6E-131 T 14-10-2018 IPR002155 Thiolase GO:0016747 Amir_6104 930de47ae380c54a76c2d5569cb4e486 397 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 Amir_6104 930de47ae380c54a76c2d5569cb4e486 397 SUPERFAMILY SSF53901 273 392 2.11E-35 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_6104 930de47ae380c54a76c2d5569cb4e486 397 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Amir_6104 930de47ae380c54a76c2d5569cb4e486 397 Gene3D G3DSA:3.40.47.10 6 277 9.5E-139 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_6429 98a75e778e6b8c47174094e76b567dde 207 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 205 3.1E-72 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Amir_6429 98a75e778e6b8c47174094e76b567dde 207 SUPERFAMILY SSF53271 3 205 2.49E-59 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Amir_6429 98a75e778e6b8c47174094e76b567dde 207 Gene3D G3DSA:3.40.50.2020 1 206 5.9E-69 T 14-10-2018 Amir_6429 98a75e778e6b8c47174094e76b567dde 207 Pfam PF14681 Uracil phosphoribosyltransferase 5 206 2.5E-60 T 14-10-2018 Amir_6429 98a75e778e6b8c47174094e76b567dde 207 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 207 39.648 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Amir_6240 e38943fe90c0a9f7e4d42fb32c0e1630 429 Gene3D G3DSA:3.90.1150.10 291 429 3.5E-51 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_6240 e38943fe90c0a9f7e4d42fb32c0e1630 429 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 422 1.4E-140 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amir_6240 e38943fe90c0a9f7e4d42fb32c0e1630 429 PIRSF PIRSF001434 1 426 1.0E-129 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amir_6240 e38943fe90c0a9f7e4d42fb32c0e1630 429 SUPERFAMILY SSF53383 3 422 6.46E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_6240 e38943fe90c0a9f7e4d42fb32c0e1630 429 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 5 422 3.1E-195 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 Amir_6240 e38943fe90c0a9f7e4d42fb32c0e1630 429 Gene3D G3DSA:3.40.640.10 4 287 1.4E-100 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_6240 e38943fe90c0a9f7e4d42fb32c0e1630 429 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amir_4169 c6b6f4601db80eac1236061c838707a9 213 Gene3D G3DSA:3.40.50.1860 7 206 1.6E-69 T 14-10-2018 Amir_4169 c6b6f4601db80eac1236061c838707a9 213 Gene3D G3DSA:3.40.50.1860 101 201 1.6E-69 T 14-10-2018 Amir_2058 532ea3d133a7642b112049ad5259e262 480 SUPERFAMILY SSF75011 148 452 6.54E-9 T 14-10-2018 Amir_2058 532ea3d133a7642b112049ad5259e262 480 Pfam PF08309 LVIVD repeat 425 454 0.72 T 14-10-2018 IPR013211 LVIVD Amir_5245 c853d505c96df19660e357b66d105289 311 Gene3D G3DSA:3.40.50.1370 136 291 6.3E-85 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Amir_5245 c853d505c96df19660e357b66d105289 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amir_5245 c853d505c96df19660e357b66d105289 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 306 37.957 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amir_5245 c853d505c96df19660e357b66d105289 311 SUPERFAMILY SSF53671 2 305 1.28E-90 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Amir_5245 c853d505c96df19660e357b66d105289 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 135 152 3.7E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amir_5245 c853d505c96df19660e357b66d105289 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 77 86 3.7E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amir_5245 c853d505c96df19660e357b66d105289 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.7E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amir_5245 c853d505c96df19660e357b66d105289 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 299 3.7E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amir_5245 c853d505c96df19660e357b66d105289 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 220 229 3.7E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amir_5245 c853d505c96df19660e357b66d105289 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 261 266 3.7E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amir_5245 c853d505c96df19660e357b66d105289 311 Gene3D G3DSA:3.40.50.1370 3 301 6.3E-85 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Amir_5245 c853d505c96df19660e357b66d105289 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 302 5.5E-20 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Amir_5245 c853d505c96df19660e357b66d105289 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 304 1.4E-80 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amir_5245 c853d505c96df19660e357b66d105289 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 149 1.0E-37 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Amir_5245 c853d505c96df19660e357b66d105289 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 2.6E-18 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amir_5245 c853d505c96df19660e357b66d105289 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 2.6E-18 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amir_5245 c853d505c96df19660e357b66d105289 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 2.6E-18 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amir_5245 c853d505c96df19660e357b66d105289 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 2.6E-18 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 SUPERFAMILY SSF63380 372 468 2.15E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 Gene3D G3DSA:2.30.110.10 160 276 1.0E-14 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 Gene3D G3DSA:3.10.20.30 601 698 3.2E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 PRINTS PR00410 Phenol hydroxylase reductase family signature 565 573 2.6E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 PRINTS PR00410 Phenol hydroxylase reductase family signature 461 470 2.6E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 PRINTS PR00410 Phenol hydroxylase reductase family signature 477 496 2.6E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 PRINTS PR00410 Phenol hydroxylase reductase family signature 399 411 2.6E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 Pfam PF00970 Oxidoreductase FAD-binding domain 383 467 1.7E-10 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 SUPERFAMILY SSF50475 161 277 1.83E-12 T 14-10-2018 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 SUPERFAMILY SSF54292 587 696 1.44E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 161 252 5.3E-9 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 Gene3D G3DSA:2.40.30.10 368 461 1.1E-24 T 14-10-2018 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 Pfam PF00175 Oxidoreductase NAD-binding domain 478 576 1.8E-12 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 399 409 1.6E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 477 496 1.6E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 418 425 1.6E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 514 525 1.6E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 Gene3D G3DSA:3.40.50.80 467 600 3.6E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 623 685 1.9E-9 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Amir_4465 d07626e0b95b6dab3d29b46d6b4cd5c9 699 SUPERFAMILY SSF52343 457 595 5.11E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amir_0628 091165f8b70588e590ce7f253e15d004 293 SUPERFAMILY SSF53448 6 282 7.89E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0628 091165f8b70588e590ce7f253e15d004 293 Pfam PF00483 Nucleotidyl transferase 7 269 5.9E-28 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Amir_0628 091165f8b70588e590ce7f253e15d004 293 Gene3D G3DSA:3.90.550.10 1 292 9.8E-82 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:3.40.47.10 1725 2161 2.4E-184 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:3.40.47.10 29 476 4.0E-187 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM00823 Phosphopantetheine attachment site 5038 5110 1.3E-26 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM00823 Phosphopantetheine attachment site 3322 3394 1.0E-31 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM00823 Phosphopantetheine attachment site 1644 1716 1.7E-31 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:3.40.50.720 2878 3288 2.6E-110 T 14-10-2018 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:3.40.50.720 1197 1603 2.3E-100 T 14-10-2018 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:3.10.129.110 2595 2877 2.1E-107 T 14-10-2018 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:3.10.129.110 911 1196 2.5E-106 T 14-10-2018 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:3.10.129.110 4277 4564 7.7E-102 T 14-10-2018 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF00550 Phosphopantetheine attachment site 3324 3390 3.0E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF00550 Phosphopantetheine attachment site 1647 1712 7.7E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF00550 Phosphopantetheine attachment site 5041 5106 4.5E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF51735 1193 1343 1.1E-20 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM00825 Beta-ketoacyl synthase 41 467 1.3E-214 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM00825 Beta-ketoacyl synthase 1736 2146 2.9E-219 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM00825 Beta-ketoacyl synthase 3416 3826 1.4E-217 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM00824 Thioesterase 5187 5397 6.0E-91 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM00826 2606 2767 1.1E-79 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM00826 922 1085 3.8E-78 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM00826 4288 4451 1.7E-75 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2096 2215 2.8E-10 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 417 531 1.5E-12 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3776 3898 1.3E-14 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF51735 1367 1597 8.44E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1978 2093 4.8E-45 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3658 3773 1.8E-44 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 297 414 2.7E-42 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1367 1541 5.7E-46 T 14-10-2018 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3045 3219 7.6E-51 T 14-10-2018 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4757 4935 2.0E-51 T 14-10-2018 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF53901 3410 3771 6.22E-104 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF55048 4057 4115 1.31E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF51735 2821 3034 1.18E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF55048 690 748 1.7E-11 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:3.40.50.1820 5129 5398 4.0E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1883 1899 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF52151 564 856 1.49E-77 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF00975 Thioesterase domain 5189 5392 4.7E-25 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF53474 5069 5396 6.8E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF51735 3044 3286 7.66E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF53901 36 415 5.03E-100 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 202 218 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 ProSitePatterns PS00012 Phosphopantetheine attachment site. 5065 5080 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF00698 Acyl transferase domain 2250 2557 5.3E-59 T 14-10-2018 IPR014043 Acyl transferase Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF00698 Acyl transferase domain 3933 4239 9.8E-56 T 14-10-2018 IPR014043 Acyl transferase Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF00698 Acyl transferase domain 566 873 5.9E-57 T 14-10-2018 IPR014043 Acyl transferase Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF52151 2248 2540 1.39E-76 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF53901 1730 2091 1.36E-105 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF55048 2374 2432 4.05E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 567 855 3.5E-133 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 2251 2539 1.5E-128 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 3934 4221 2.1E-124 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF47336 5034 5121 8.9E-20 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF47336 3318 3429 1.1E-23 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:3.40.50.720 4567 5011 1.1E-124 T 14-10-2018 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1671 1686 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF52151 3931 4209 1.91E-74 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:3.30.70.3290 3849 4269 3.3E-160 T 14-10-2018 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:3.30.70.3290 484 903 1.2E-162 T 14-10-2018 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:1.10.1200.10 5017 5111 2.3E-29 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:1.10.1200.10 3302 3395 7.1E-32 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:3.40.366.10 3932 4224 3.3E-160 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:3.40.366.10 2249 2542 2.6E-160 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:3.40.366.10 565 858 1.2E-162 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3414 3650 5.5E-83 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 39 289 6.0E-90 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1734 1970 2.8E-85 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:3.40.47.10 3410 3832 5.2E-179 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF08659 KR domain 4758 4933 7.7E-55 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF08659 KR domain 1367 1539 4.0E-51 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF08659 KR domain 3045 3217 1.2E-53 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF14765 Polyketide synthase dehydratase 4288 4559 8.8E-51 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF14765 Polyketide synthase dehydratase 2606 2874 2.0E-54 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF14765 Polyketide synthase dehydratase 922 1191 1.8E-50 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF51735 4564 4743 3.78E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF51735 4755 5008 3.92E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:1.10.1200.10 1627 1719 2.6E-35 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Gene3D G3DSA:3.30.70.3290 2164 2587 2.6E-160 T 14-10-2018 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 3563 3579 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 Pfam PF08990 Erythronolide synthase docking 7 32 1.9E-13 T 14-10-2018 IPR015083 Polyketide synthase, docking domain GO:0016740|GO:0048037 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM01294 3323 3390 1.0E-6 T 14-10-2018 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM01294 5039 5106 6.8E-7 T 14-10-2018 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SMART SM01294 1645 1712 1.0E-5 T 14-10-2018 Amir_2684 e1c479b4a20f64266456cb8d62ed0ea4 5400 SUPERFAMILY SSF47336 1638 1749 2.88E-26 T 14-10-2018 IPR036736 ACP-like superfamily Amir_1020 7d5347b18d77093e172c627825f14556 254 SUPERFAMILY SSF54211 2 183 1.72E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_1020 7d5347b18d77093e172c627825f14556 254 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 3 238 2.4E-106 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Amir_1020 7d5347b18d77093e172c627825f14556 254 Pfam PF03725 3' exoribonuclease family, domain 2 160 225 1.4E-9 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amir_1020 7d5347b18d77093e172c627825f14556 254 Hamap MF_00564 Ribonuclease PH [rph]. 12 239 42.528 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Amir_1020 7d5347b18d77093e172c627825f14556 254 SUPERFAMILY SSF55666 156 244 1.18E-21 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amir_1020 7d5347b18d77093e172c627825f14556 254 ProSitePatterns PS01277 Ribonuclease PH signature. 117 130 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site Amir_1020 7d5347b18d77093e172c627825f14556 254 Pfam PF01138 3' exoribonuclease family, domain 1 12 141 1.1E-21 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amir_1020 7d5347b18d77093e172c627825f14556 254 Gene3D G3DSA:3.30.230.70 15 254 1.4E-59 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amir_1865 5861952af1dcdaed4e9fc12e853e35dd 508 Gene3D G3DSA:3.40.50.300 257 507 3.6E-42 T 14-10-2018 Amir_1865 5861952af1dcdaed4e9fc12e853e35dd 508 Gene3D G3DSA:3.40.50.300 4 237 1.9E-55 T 14-10-2018 Amir_1865 5861952af1dcdaed4e9fc12e853e35dd 508 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_1865 5861952af1dcdaed4e9fc12e853e35dd 508 SUPERFAMILY SSF52540 5 233 4.15E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1865 5861952af1dcdaed4e9fc12e853e35dd 508 SMART SM00382 287 482 2.8E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1865 5861952af1dcdaed4e9fc12e853e35dd 508 SMART SM00382 30 220 7.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1865 5861952af1dcdaed4e9fc12e853e35dd 508 SUPERFAMILY SSF52540 247 495 4.07E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1865 5861952af1dcdaed4e9fc12e853e35dd 508 Pfam PF00005 ABC transporter 279 434 2.0E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1865 5861952af1dcdaed4e9fc12e853e35dd 508 Pfam PF00005 ABC transporter 21 172 1.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3195 15f22f3c474d41a09d4b09e908bf36ab 144 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_3195 15f22f3c474d41a09d4b09e908bf36ab 144 Pfam PF01220 Dehydroquinase class II 4 138 4.4E-44 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_3195 15f22f3c474d41a09d4b09e908bf36ab 144 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 17 123 3.0E-48 T 14-10-2018 Amir_3195 15f22f3c474d41a09d4b09e908bf36ab 144 Gene3D G3DSA:3.40.50.9100 2 144 6.2E-49 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_3195 15f22f3c474d41a09d4b09e908bf36ab 144 SUPERFAMILY SSF52304 3 142 4.84E-49 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_3195 15f22f3c474d41a09d4b09e908bf36ab 144 PIRSF PIRSF001399 1 144 8.7E-47 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_3195 15f22f3c474d41a09d4b09e908bf36ab 144 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 144 50.354 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2295 2454 1.1E-17 T 14-10-2018 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Gene3D G3DSA:3.40.50.12780 1 377 2.7E-104 T 14-10-2018 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Gene3D G3DSA:3.40.50.12780 949 1332 4.8E-83 T 14-10-2018 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 ProSitePatterns PS00455 Putative AMP-binding domain signature. 128 139 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 SUPERFAMILY SSF47336 1450 1542 6.02E-11 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Pfam PF00975 Thioesterase domain 2613 2825 3.9E-19 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 ProSitePatterns PS00012 Phosphopantetheine attachment site. 511 526 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 SMART SM00825 Beta-ketoacyl synthase 1530 1931 1.4E-137 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 SUPERFAMILY SSF56801 4 500 3.27E-116 T 14-10-2018 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 SMART SM00823 Phosphopantetheine attachment site 1448 1515 0.0045 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 SMART SM00823 Phosphopantetheine attachment site 487 552 0.38 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 SMART SM00823 Phosphopantetheine attachment site 2525 2581 0.0086 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 SUPERFAMILY SSF56801 950 1421 2.35E-100 T 14-10-2018 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1887 1976 1.8E-16 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Pfam PF00550 Phosphopantetheine attachment site 489 549 3.0E-6 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Pfam PF00550 Phosphopantetheine attachment site 1450 1511 4.2E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Pfam PF00550 Phosphopantetheine attachment site 2527 2577 3.5E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 SUPERFAMILY SSF52777 742 941 3.89E-32 T 14-10-2018 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1768 1882 1.8E-35 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Gene3D G3DSA:3.30.559.30 722 939 1.9E-62 T 14-10-2018 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Pfam PF00501 AMP-binding enzyme 10 383 9.7E-71 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Pfam PF00501 AMP-binding enzyme 961 1337 2.4E-62 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Gene3D G3DSA:1.10.1200.10 1443 1518 3.3E-11 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Gene3D G3DSA:1.10.1200.10 477 558 8.6E-10 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 SUPERFAMILY SSF47336 2526 2605 5.23E-10 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Gene3D G3DSA:3.40.47.10 1524 1931 9.8E-141 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Pfam PF13193 AMP-binding enzyme C-terminal domain 391 461 4.4E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Pfam PF13193 AMP-binding enzyme C-terminal domain 1347 1414 2.5E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Gene3D G3DSA:3.30.559.10 572 887 1.9E-62 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Gene3D G3DSA:3.30.300.30 1333 1427 9.2E-20 T 14-10-2018 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 SUPERFAMILY SSF47336 483 541 8.9E-9 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2549 2564 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 SUPERFAMILY SSF53901 1525 1927 2.07E-75 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 SUPERFAMILY SSF51735 2294 2507 4.74E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Gene3D G3DSA:3.40.50.1820 2601 2827 7.1E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1673 1689 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 SUPERFAMILY SSF52777 574 717 1.78E-27 T 14-10-2018 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Gene3D G3DSA:3.40.50.720 2059 2518 1.5E-54 T 14-10-2018 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Pfam PF00668 Condensation domain 569 638 2.9E-9 T 14-10-2018 IPR001242 Condensation domain Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Pfam PF00668 Condensation domain 656 939 8.7E-21 T 14-10-2018 IPR001242 Condensation domain Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 SUPERFAMILY SSF53474 2598 2825 4.75E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Gene3D G3DSA:3.30.70.3290 1940 2056 1.9E-14 T 14-10-2018 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Pfam PF08659 KR domain 2295 2453 1.3E-20 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Gene3D G3DSA:3.30.300.30 378 471 1.3E-23 T 14-10-2018 Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Gene3D G3DSA:1.10.1200.10 2519 2597 1.4E-8 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3892 97d13ba3e0ab1c0fd5dc03a74618c1f5 2827 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1528 1760 1.0E-56 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_5676 895e9a65bb9c309d80d9a857de692e81 953 SMART SM00382 31 221 0.0042 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5676 895e9a65bb9c309d80d9a857de692e81 953 Pfam PF13191 AAA ATPase domain 9 187 9.3E-26 T 14-10-2018 Amir_5676 895e9a65bb9c309d80d9a857de692e81 953 Gene3D G3DSA:1.25.40.10 485 660 1.1E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5676 895e9a65bb9c309d80d9a857de692e81 953 SUPERFAMILY SSF46894 884 950 3.74E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_5676 895e9a65bb9c309d80d9a857de692e81 953 SMART SM00421 886 943 7.4E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5676 895e9a65bb9c309d80d9a857de692e81 953 Pfam PF00196 Bacterial regulatory proteins, luxR family 888 943 1.2E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5676 895e9a65bb9c309d80d9a857de692e81 953 SUPERFAMILY SSF48452 466 634 3.31E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5676 895e9a65bb9c309d80d9a857de692e81 953 SUPERFAMILY SSF52540 23 255 2.57E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5676 895e9a65bb9c309d80d9a857de692e81 953 ProSitePatterns PS00622 LuxR-type HTH domain signature. 903 930 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5676 895e9a65bb9c309d80d9a857de692e81 953 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 903 919 4.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5676 895e9a65bb9c309d80d9a857de692e81 953 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 919 931 4.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5676 895e9a65bb9c309d80d9a857de692e81 953 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 889 903 4.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5676 895e9a65bb9c309d80d9a857de692e81 953 Gene3D G3DSA:1.10.10.10 885 949 2.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1962 8809b71acc1def87d556efa2b1ff00cb 292 Gene3D G3DSA:3.30.1600.10 48 210 1.8E-77 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily Amir_1962 8809b71acc1def87d556efa2b1ff00cb 292 SUPERFAMILY SSF52467 28 286 1.36E-73 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amir_1962 8809b71acc1def87d556efa2b1ff00cb 292 Pfam PF02146 Sir2 family 39 240 6.4E-45 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 Amir_1962 8809b71acc1def87d556efa2b1ff00cb 292 Hamap MF_01967 NAD-dependent protein deacetylase [cobB]. 16 285 61.621 T 14-10-2018 IPR026587 Sirtuin, class II Reactome: R-HSA-2151201 Amir_1962 8809b71acc1def87d556efa2b1ff00cb 292 Gene3D G3DSA:3.40.50.1220 33 279 1.8E-77 T 14-10-2018 Amir_4131 89d346296cb44bf5608feedc0cbe5820 635 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 41 289 1.0E-6 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 Amir_4131 89d346296cb44bf5608feedc0cbe5820 635 SUPERFAMILY SSF51445 5 329 1.2E-43 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_4131 89d346296cb44bf5608feedc0cbe5820 635 Gene3D G3DSA:3.20.20.80 4 312 1.6E-41 T 14-10-2018 Amir_4131 89d346296cb44bf5608feedc0cbe5820 635 Gene3D G3DSA:3.40.50.880 343 575 4.1E-11 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_6072 b98d0d015c1defb0bb5485e858933573 659 Gene3D G3DSA:1.20.58.280 93 174 4.7E-59 T 14-10-2018 Amir_6072 b98d0d015c1defb0bb5485e858933573 659 SUPERFAMILY SSF51445 191 560 6.53E-82 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_6072 b98d0d015c1defb0bb5485e858933573 659 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 1 655 44.906 T 14-10-2018 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 Amir_6072 b98d0d015c1defb0bb5485e858933573 659 SMART SM00642 199 553 3.7E-4 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_6072 b98d0d015c1defb0bb5485e858933573 659 Gene3D G3DSA:2.60.40.1180 565 658 2.6E-33 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_6072 b98d0d015c1defb0bb5485e858933573 659 Gene3D G3DSA:3.20.20.80 194 564 1.2E-162 T 14-10-2018 Amir_6072 b98d0d015c1defb0bb5485e858933573 659 Pfam PF11896 Domain of unknown function (DUF3416) 3 193 9.6E-60 T 14-10-2018 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 Amir_6072 b98d0d015c1defb0bb5485e858933573 659 Gene3D G3DSA:2.60.40.10 4 193 4.7E-59 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_4071 aaf16be1941110370d66dae59dc0f892 252 Gene3D G3DSA:3.40.50.300 28 251 6.9E-68 T 14-10-2018 Amir_4071 aaf16be1941110370d66dae59dc0f892 252 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_4071 aaf16be1941110370d66dae59dc0f892 252 SMART SM00382 56 243 4.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4071 aaf16be1941110370d66dae59dc0f892 252 SUPERFAMILY SSF52540 30 248 4.93E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4071 aaf16be1941110370d66dae59dc0f892 252 Pfam PF00005 ABC transporter 47 195 2.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2573 8bdebd0e19927a54f475ab4e56fd1746 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 269 1.6E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_2573 8bdebd0e19927a54f475ab4e56fd1746 283 Gene3D G3DSA:1.10.3720.10 3 273 1.4E-59 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2573 8bdebd0e19927a54f475ab4e56fd1746 283 SUPERFAMILY SSF161098 5 282 8.5E-57 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2099 2d0c77cac85e501a2c100108f9b24963 463 SUPERFAMILY SSF51556 56 384 4.16E-111 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_2099 2d0c77cac85e501a2c100108f9b24963 463 Gene3D G3DSA:2.30.40.10 4 457 2.7E-177 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_2099 2d0c77cac85e501a2c100108f9b24963 463 Pfam PF01979 Amidohydrolase family 52 438 6.3E-27 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_2099 2d0c77cac85e501a2c100108f9b24963 463 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 4 456 2.6E-177 T 14-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 Amir_2099 2d0c77cac85e501a2c100108f9b24963 463 SUPERFAMILY SSF51338 2 72 7.56E-10 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_2099 2d0c77cac85e501a2c100108f9b24963 463 Gene3D G3DSA:3.20.20.140 56 425 2.7E-177 T 14-10-2018 Amir_2099 2d0c77cac85e501a2c100108f9b24963 463 SUPERFAMILY SSF51338 362 457 9.99E-35 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_1691 5193f546143301d84aebf0bf7c20fc34 198 SUPERFAMILY SSF46929 148 196 5.76E-9 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily Amir_1691 5193f546143301d84aebf0bf7c20fc34 198 SUPERFAMILY SSF47781 65 134 1.85E-18 T 14-10-2018 IPR010994 RuvA domain 2-like Amir_1691 5193f546143301d84aebf0bf7c20fc34 198 SUPERFAMILY SSF50249 2 62 4.85E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_1691 5193f546143301d84aebf0bf7c20fc34 198 Pfam PF01330 RuvA N terminal domain 2 61 2.5E-16 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 Amir_1691 5193f546143301d84aebf0bf7c20fc34 198 Gene3D G3DSA:1.10.150.20 66 146 2.8E-22 T 14-10-2018 Amir_1691 5193f546143301d84aebf0bf7c20fc34 198 Gene3D G3DSA:2.40.50.140 1 64 2.3E-23 T 14-10-2018 Amir_1691 5193f546143301d84aebf0bf7c20fc34 198 Gene3D G3DSA:1.10.8.10 148 198 5.8E-19 T 14-10-2018 Amir_1691 5193f546143301d84aebf0bf7c20fc34 198 Pfam PF07499 RuvA, C-terminal domain 149 194 3.6E-12 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 Amir_1691 5193f546143301d84aebf0bf7c20fc34 198 SMART SM00278 107 126 2.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amir_1691 5193f546143301d84aebf0bf7c20fc34 198 SMART SM00278 72 91 210.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amir_1691 5193f546143301d84aebf0bf7c20fc34 198 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 195 27.769 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Amir_1691 5193f546143301d84aebf0bf7c20fc34 198 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 191 6.5E-37 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Amir_1691 5193f546143301d84aebf0bf7c20fc34 198 Pfam PF14520 Helix-hairpin-helix domain 71 129 6.1E-14 T 14-10-2018 Amir_2765 aae7550012c92e4639090f00cfd3e91b 410 Gene3D G3DSA:3.30.420.40 97 394 1.6E-71 T 14-10-2018 Amir_2765 aae7550012c92e4639090f00cfd3e91b 410 Gene3D G3DSA:1.10.10.10 15 85 1.5E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2765 aae7550012c92e4639090f00cfd3e91b 410 SUPERFAMILY SSF46785 23 81 8.93E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2765 aae7550012c92e4639090f00cfd3e91b 410 Pfam PF00480 ROK family 92 399 6.9E-50 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_2765 aae7550012c92e4639090f00cfd3e91b 410 Gene3D G3DSA:3.30.420.40 218 385 1.6E-71 T 14-10-2018 Amir_2765 aae7550012c92e4639090f00cfd3e91b 410 Pfam PF12802 MarR family 28 74 7.8E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2765 aae7550012c92e4639090f00cfd3e91b 410 SUPERFAMILY SSF53067 91 400 5.76E-47 T 14-10-2018 Amir_5954 1fcbb16a3b42e5e4120e6dad17a82cb5 162 Gene3D G3DSA:1.10.10.10 89 161 2.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5954 1fcbb16a3b42e5e4120e6dad17a82cb5 162 Gene3D G3DSA:1.10.1740.10 2 74 1.4E-7 T 14-10-2018 Amir_5954 1fcbb16a3b42e5e4120e6dad17a82cb5 162 SUPERFAMILY SSF88659 91 154 1.1E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5954 1fcbb16a3b42e5e4120e6dad17a82cb5 162 SUPERFAMILY SSF88946 3 73 2.12E-10 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5954 1fcbb16a3b42e5e4120e6dad17a82cb5 162 Pfam PF04545 Sigma-70, region 4 103 152 2.4E-9 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amir_5954 1fcbb16a3b42e5e4120e6dad17a82cb5 162 Pfam PF04542 Sigma-70 region 2 11 74 2.2E-6 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_1089 51c9591b0ca6a4e8567fb0c46202b6b5 507 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Amir_1089 51c9591b0ca6a4e8567fb0c46202b6b5 507 Pfam PF00171 Aldehyde dehydrogenase family 35 494 3.1E-161 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_1089 51c9591b0ca6a4e8567fb0c46202b6b5 507 SUPERFAMILY SSF53720 14 499 6.54E-161 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_1089 51c9591b0ca6a4e8567fb0c46202b6b5 507 Gene3D G3DSA:3.40.309.10 266 468 1.1E-160 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_1089 51c9591b0ca6a4e8567fb0c46202b6b5 507 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 262 269 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Amir_1089 51c9591b0ca6a4e8567fb0c46202b6b5 507 Gene3D G3DSA:3.40.605.10 35 493 1.1E-160 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_3447 503286a79a6122c7797549e502566cae 324 Pfam PF00589 Phage integrase family 123 299 2.8E-18 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amir_3447 503286a79a6122c7797549e502566cae 324 SUPERFAMILY SSF56349 8 306 6.77E-36 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amir_3447 503286a79a6122c7797549e502566cae 324 Gene3D G3DSA:1.10.443.10 119 306 4.0E-31 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amir_3447 503286a79a6122c7797549e502566cae 324 Gene3D G3DSA:1.10.150.130 1 110 5.2E-7 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Amir_1724 88697d337f4bc58d381b08c0344fc5da 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 239 2.6E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_1724 88697d337f4bc58d381b08c0344fc5da 243 Gene3D G3DSA:3.40.50.2300 4 142 7.0E-36 T 14-10-2018 Amir_1724 88697d337f4bc58d381b08c0344fc5da 243 SUPERFAMILY SSF52172 13 138 4.55E-40 T 14-10-2018 IPR011006 CheY-like superfamily Amir_1724 88697d337f4bc58d381b08c0344fc5da 243 SMART SM00448 18 129 3.2E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1724 88697d337f4bc58d381b08c0344fc5da 243 Gene3D G3DSA:1.10.10.10 143 243 1.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1724 88697d337f4bc58d381b08c0344fc5da 243 Pfam PF00072 Response regulator receiver domain 20 129 7.7E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1724 88697d337f4bc58d381b08c0344fc5da 243 SUPERFAMILY SSF46894 143 240 3.4E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_1724 88697d337f4bc58d381b08c0344fc5da 243 SMART SM00862 165 239 1.1E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_0878 33fc2d1922d21053e69754fb2ef7711e 347 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 203 216 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Amir_0878 33fc2d1922d21053e69754fb2ef7711e 347 Pfam PF00155 Aminotransferase class I and II 33 340 7.0E-25 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_0878 33fc2d1922d21053e69754fb2ef7711e 347 SUPERFAMILY SSF53383 20 341 4.03E-56 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_0878 33fc2d1922d21053e69754fb2ef7711e 347 Gene3D G3DSA:3.40.640.10 35 251 2.0E-77 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_0878 33fc2d1922d21053e69754fb2ef7711e 347 Gene3D G3DSA:3.90.1150.10 23 341 2.0E-77 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_0525 041e4af1db6f50b1d15d04aff1b41f7d 381 PIRSF PIRSF016578 3 195 2.4E-7 T 14-10-2018 Amir_0525 041e4af1db6f50b1d15d04aff1b41f7d 381 PIRSF PIRSF016578 209 379 4.0E-10 T 14-10-2018 Amir_0525 041e4af1db6f50b1d15d04aff1b41f7d 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amir_0525 041e4af1db6f50b1d15d04aff1b41f7d 381 Gene3D G3DSA:1.10.540.10 4 122 1.8E-27 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_0525 041e4af1db6f50b1d15d04aff1b41f7d 381 SUPERFAMILY SSF47203 229 379 3.38E-55 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_0525 041e4af1db6f50b1d15d04aff1b41f7d 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 120 8.9E-24 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_0525 041e4af1db6f50b1d15d04aff1b41f7d 381 SUPERFAMILY SSF56645 8 243 1.23E-64 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_0525 041e4af1db6f50b1d15d04aff1b41f7d 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 7.1E-48 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_0525 041e4af1db6f50b1d15d04aff1b41f7d 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 126 138 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amir_0525 041e4af1db6f50b1d15d04aff1b41f7d 381 Gene3D G3DSA:2.40.110.10 123 235 5.5E-34 T 14-10-2018 Amir_0525 041e4af1db6f50b1d15d04aff1b41f7d 381 Gene3D G3DSA:1.20.140.10 236 381 4.3E-53 T 14-10-2018 Amir_0525 041e4af1db6f50b1d15d04aff1b41f7d 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 217 1.5E-21 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amir_3610 be1b9a65a6d4fa9b8c35f622b20d0abe 724 Pfam PF03995 Peptidase inhibitor family I36 622 696 1.4E-6 T 14-10-2018 Amir_3610 be1b9a65a6d4fa9b8c35f622b20d0abe 724 Gene3D G3DSA:3.40.190.10 154 475 8.0E-52 T 14-10-2018 Amir_3610 be1b9a65a6d4fa9b8c35f622b20d0abe 724 Pfam PF13416 Bacterial extracellular solute-binding protein 173 459 3.0E-14 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_3610 be1b9a65a6d4fa9b8c35f622b20d0abe 724 SUPERFAMILY SSF53850 152 499 3.73E-44 T 14-10-2018 Amir_3610 be1b9a65a6d4fa9b8c35f622b20d0abe 724 Gene3D G3DSA:3.40.190.10 250 511 8.0E-52 T 14-10-2018 Amir_6522 4dc961408f2908d89299da1eacf3cec8 300 SUPERFAMILY SSF53850 89 298 1.18E-40 T 14-10-2018 Amir_6522 4dc961408f2908d89299da1eacf3cec8 300 SUPERFAMILY SSF46785 1 111 1.1E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6522 4dc961408f2908d89299da1eacf3cec8 300 Gene3D G3DSA:1.10.10.10 1 93 1.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6522 4dc961408f2908d89299da1eacf3cec8 300 Pfam PF03466 LysR substrate binding domain 88 297 1.7E-44 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_6522 4dc961408f2908d89299da1eacf3cec8 300 Gene3D G3DSA:3.40.190.10 94 284 5.7E-47 T 14-10-2018 Amir_6522 4dc961408f2908d89299da1eacf3cec8 300 Gene3D G3DSA:3.40.190.10 169 271 5.7E-47 T 14-10-2018 Amir_6522 4dc961408f2908d89299da1eacf3cec8 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.0E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_1974 7a85eb747f69dee50a19b6340ea6f901 260 Pfam PF08241 Methyltransferase domain 51 144 3.3E-16 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_1974 7a85eb747f69dee50a19b6340ea6f901 260 Gene3D G3DSA:3.40.50.150 3 227 4.2E-33 T 14-10-2018 Amir_1974 7a85eb747f69dee50a19b6340ea6f901 260 SUPERFAMILY SSF53335 11 200 1.61E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_5743 512c0d03bdf5ed0d492f7471ba56e14c 1176 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 315 757 4.8E-158 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5743 512c0d03bdf5ed0d492f7471ba56e14c 1176 Gene3D G3DSA:3.20.20.140 2 291 6.9E-92 T 14-10-2018 Amir_5743 512c0d03bdf5ed0d492f7471ba56e14c 1176 SMART SM00481 6 73 1.0E-29 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Amir_5743 512c0d03bdf5ed0d492f7471ba56e14c 1176 Gene3D G3DSA:1.10.150.870 801 907 1.5E-5 T 14-10-2018 Amir_5743 512c0d03bdf5ed0d492f7471ba56e14c 1176 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1054 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5743 512c0d03bdf5ed0d492f7471ba56e14c 1176 Gene3D G3DSA:1.10.10.1600 448 537 3.0E-18 T 14-10-2018 Amir_5743 512c0d03bdf5ed0d492f7471ba56e14c 1176 Pfam PF14579 Helix-hairpin-helix motif 830 917 2.2E-27 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5743 512c0d03bdf5ed0d492f7471ba56e14c 1176 SUPERFAMILY SSF89550 5 267 1.1E-29 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Amir_5743 512c0d03bdf5ed0d492f7471ba56e14c 1176 Pfam PF02811 PHP domain 7 193 5.3E-44 T 14-10-2018 IPR004013 PHP domain GO:0003824 Amir_0213 43a9d3d7483d92e14deb5c275769c6f7 598 SUPERFAMILY SSF51569 58 366 1.57E-96 T 14-10-2018 Amir_0213 43a9d3d7483d92e14deb5c275769c6f7 598 Pfam PF08502 LeuA allosteric (dimerisation) domain 468 596 1.9E-31 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amir_0213 43a9d3d7483d92e14deb5c275769c6f7 598 Gene3D G3DSA:3.20.20.70 46 422 4.2E-161 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_0213 43a9d3d7483d92e14deb5c275769c6f7 598 SMART SM00917 468 597 3.5E-34 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amir_0213 43a9d3d7483d92e14deb5c275769c6f7 598 Gene3D G3DSA:3.30.160.270 423 596 9.7E-64 T 14-10-2018 Amir_0213 43a9d3d7483d92e14deb5c275769c6f7 598 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 39 598 1.6E-274 T 14-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amir_0213 43a9d3d7483d92e14deb5c275769c6f7 598 SUPERFAMILY SSF110921 491 596 4.45E-36 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amir_0213 43a9d3d7483d92e14deb5c275769c6f7 598 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 40 598 55.474 T 14-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amir_0213 43a9d3d7483d92e14deb5c275769c6f7 598 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 279 292 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amir_0213 43a9d3d7483d92e14deb5c275769c6f7 598 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 76 92 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amir_0213 43a9d3d7483d92e14deb5c275769c6f7 598 SUPERFAMILY SSF89000 434 483 7.45E-16 T 14-10-2018 Amir_0213 43a9d3d7483d92e14deb5c275769c6f7 598 Pfam PF00682 HMGL-like 69 349 5.4E-78 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Amir_2171 37b2b440875e50de50f872da3f9c4172 324 Gene3D G3DSA:1.10.3720.10 75 318 2.7E-54 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2171 37b2b440875e50de50f872da3f9c4172 324 SUPERFAMILY SSF161098 81 306 2.35E-46 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2171 37b2b440875e50de50f872da3f9c4172 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 302 1.4E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_2040 1b9dc2726d8cdcce00fc24b2860df09f 1222 Pfam PF00384 Molybdopterin oxidoreductase 113 822 4.2E-144 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_2040 1b9dc2726d8cdcce00fc24b2860df09f 1222 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 15 1216 0.0 T 14-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Amir_2040 1b9dc2726d8cdcce00fc24b2860df09f 1222 Pfam PF01568 Molydopterin dinucleotide binding domain 1076 1185 5.7E-21 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Amir_2040 1b9dc2726d8cdcce00fc24b2860df09f 1222 Gene3D G3DSA:3.40.50.12440 49 1222 0.0 T 14-10-2018 Amir_2040 1b9dc2726d8cdcce00fc24b2860df09f 1222 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 53 71 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Amir_2040 1b9dc2726d8cdcce00fc24b2860df09f 1222 SUPERFAMILY SSF50692 1067 1216 1.92E-43 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Amir_2040 1b9dc2726d8cdcce00fc24b2860df09f 1222 SMART SM00926 48 110 5.0E-5 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_2040 1b9dc2726d8cdcce00fc24b2860df09f 1222 SUPERFAMILY SSF53706 15 1054 0.0 T 14-10-2018 Amir_4782 137417aa47e3b915d86a4e0546b84039 327 SUPERFAMILY SSF53807 47 321 2.24E-41 T 14-10-2018 Amir_4782 137417aa47e3b915d86a4e0546b84039 327 Gene3D G3DSA:3.40.50.1980 28 149 2.1E-14 T 14-10-2018 Amir_4782 137417aa47e3b915d86a4e0546b84039 327 Gene3D G3DSA:3.40.50.1980 155 325 4.7E-59 T 14-10-2018 Amir_4782 137417aa47e3b915d86a4e0546b84039 327 Pfam PF01497 Periplasmic binding protein 50 300 3.0E-29 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Amir_4764 0ad11cb9dcc67f3221093c04cc963f2c 181 Gene3D G3DSA:1.10.357.10 1 180 1.0E-49 T 14-10-2018 Amir_4764 0ad11cb9dcc67f3221093c04cc963f2c 181 Pfam PF13305 WHG domain 83 161 6.3E-19 T 14-10-2018 IPR025996 WHG domain Amir_4764 0ad11cb9dcc67f3221093c04cc963f2c 181 SUPERFAMILY SSF46689 3 73 2.14E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4764 0ad11cb9dcc67f3221093c04cc963f2c 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 2.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4764 0ad11cb9dcc67f3221093c04cc963f2c 181 SUPERFAMILY SSF48498 76 177 6.78E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 Gene3D G3DSA:3.40.50.1000 417 681 6.8E-76 T 14-10-2018 IPR023214 HAD superfamily Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 SUPERFAMILY SSF81653 241 333 3.14E-24 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 201 732 2.0E-144 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 159 731 5.7E-162 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 211 714 5.9E-79 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 PRINTS PR00943 Copper-transporting ATPase signature 359 373 7.9E-7 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 PRINTS PR00943 Copper-transporting ATPase signature 144 163 7.9E-7 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 PRINTS PR00943 Copper-transporting ATPase signature 663 677 7.9E-7 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 PRINTS PR00943 Copper-transporting ATPase signature 606 623 7.9E-7 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 PRINTS PR00943 Copper-transporting ATPase signature 419 434 7.9E-7 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 PRINTS PR00943 Copper-transporting ATPase signature 26 40 7.9E-7 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 Gene3D G3DSA:2.70.150.20 230 340 9.4E-34 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 SUPERFAMILY SSF55008 12 76 4.71E-17 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 ProSitePatterns PS01047 Heavy-metal-associated domain. 16 44 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 Pfam PF00403 Heavy-metal-associated domain 16 72 4.0E-11 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 Gene3D G3DSA:3.30.70.100 12 76 4.2E-18 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 SUPERFAMILY SSF56784 434 729 5.21E-50 T 14-10-2018 IPR036412 HAD-like superfamily Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 Pfam PF00122 E1-E2 ATPase 237 414 4.7E-53 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 Gene3D G3DSA:3.40.1110.10 447 561 6.8E-76 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 648 2.2E-27 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 436 450 2.2E-27 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 576 586 2.2E-27 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 286 300 2.2E-27 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 652 664 2.2E-27 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 554 565 2.2E-27 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 Pfam PF00702 haloacid dehalogenase-like hydrolase 432 643 7.0E-35 T 14-10-2018 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 SUPERFAMILY SSF81665 337 428 3.79E-12 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Amir_2769 0cafec1d0c18d66f0a7bcd709975bb78 739 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 438 444 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Amir_6418 c6749bd9f749d49f10b72143a9886b95 729 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 596 724 2.1E-62 T 14-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amir_6418 c6749bd9f749d49f10b72143a9886b95 729 Pfam PF01642 Methylmalonyl-CoA mutase 40 557 2.0E-231 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amir_6418 c6749bd9f749d49f10b72143a9886b95 729 SUPERFAMILY SSF52242 562 725 5.89E-59 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amir_6418 c6749bd9f749d49f10b72143a9886b95 729 Gene3D G3DSA:3.40.50.280 563 726 2.0E-55 T 14-10-2018 Amir_6418 c6749bd9f749d49f10b72143a9886b95 729 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 39 564 1.7E-274 T 14-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amir_6418 c6749bd9f749d49f10b72143a9886b95 729 Pfam PF02310 B12 binding domain 599 715 5.1E-15 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amir_6418 c6749bd9f749d49f10b72143a9886b95 729 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 382 407 - T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amir_6418 c6749bd9f749d49f10b72143a9886b95 729 Gene3D G3DSA:3.20.20.240 39 559 1.4E-238 T 14-10-2018 Amir_6418 c6749bd9f749d49f10b72143a9886b95 729 SUPERFAMILY SSF51703 20 559 1.54E-219 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amir_1506 c2a4b8e44a8064f21630e593f1a609ae 390 SUPERFAMILY SSF53067 87 384 3.73E-41 T 14-10-2018 Amir_1506 c2a4b8e44a8064f21630e593f1a609ae 390 Gene3D G3DSA:1.10.10.10 3 79 2.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1506 c2a4b8e44a8064f21630e593f1a609ae 390 Pfam PF00480 ROK family 88 382 9.1E-50 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_1506 c2a4b8e44a8064f21630e593f1a609ae 390 Gene3D G3DSA:3.30.420.40 95 379 2.2E-67 T 14-10-2018 Amir_1506 c2a4b8e44a8064f21630e593f1a609ae 390 Gene3D G3DSA:3.30.420.40 208 369 2.2E-67 T 14-10-2018 Amir_1506 c2a4b8e44a8064f21630e593f1a609ae 390 SUPERFAMILY SSF46785 13 77 1.52E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4861 2d560ef412d37a9858b9e875a72c3fab 85 Pfam PF00550 Phosphopantetheine attachment site 9 75 7.2E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4861 2d560ef412d37a9858b9e875a72c3fab 85 SUPERFAMILY SSF47336 1 78 4.45E-19 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4861 2d560ef412d37a9858b9e875a72c3fab 85 Gene3D G3DSA:1.10.1200.10 1 85 5.9E-21 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4861 2d560ef412d37a9858b9e875a72c3fab 85 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 36 77 1.0E-6 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Amir_4861 2d560ef412d37a9858b9e875a72c3fab 85 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 14.92 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Amir_4033 c554c83279415966ca1b1054fc3a66ed 527 SUPERFAMILY SSF51905 7 363 2.29E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4033 c554c83279415966ca1b1054fc3a66ed 527 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.4E-9 T 14-10-2018 Amir_4033 c554c83279415966ca1b1054fc3a66ed 527 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 1.4E-9 T 14-10-2018 Amir_4033 c554c83279415966ca1b1054fc3a66ed 527 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.4E-9 T 14-10-2018 Amir_4033 c554c83279415966ca1b1054fc3a66ed 527 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 6.9E-8 T 14-10-2018 Amir_4033 c554c83279415966ca1b1054fc3a66ed 527 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 6.9E-8 T 14-10-2018 Amir_4033 c554c83279415966ca1b1054fc3a66ed 527 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 280 294 6.9E-8 T 14-10-2018 Amir_4033 c554c83279415966ca1b1054fc3a66ed 527 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 6.9E-8 T 14-10-2018 Amir_4033 c554c83279415966ca1b1054fc3a66ed 527 Gene3D G3DSA:3.50.50.60 11 362 3.2E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4033 c554c83279415966ca1b1054fc3a66ed 527 Gene3D G3DSA:3.50.50.60 155 286 3.2E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4033 c554c83279415966ca1b1054fc3a66ed 527 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 10 328 1.6E-53 T 14-10-2018 Amir_5675 8127d7c39a119ef89870b5e73637336e 250 Pfam PF00005 ABC transporter 34 179 5.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5675 8127d7c39a119ef89870b5e73637336e 250 Gene3D G3DSA:3.40.50.300 12 247 1.1E-65 T 14-10-2018 Amir_5675 8127d7c39a119ef89870b5e73637336e 250 SMART SM00382 42 228 1.3E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5675 8127d7c39a119ef89870b5e73637336e 250 SUPERFAMILY SSF52540 14 231 4.83E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0495 56bca76e5b2242d6837c8e85830221ea 497 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 195 254 8.2E-6 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Amir_0495 56bca76e5b2242d6837c8e85830221ea 497 Gene3D G3DSA:3.30.590.20 40 469 1.5E-59 T 14-10-2018 Amir_0495 56bca76e5b2242d6837c8e85830221ea 497 SUPERFAMILY SSF55931 36 466 4.22E-53 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amir_0495 56bca76e5b2242d6837c8e85830221ea 497 PIRSF PIRSF012666 1 497 1.3E-209 T 14-10-2018 IPR016602 Uncharacterised conserved protein UCP012666 Amir_3809 d045199604f67320824ef187ed9347a1 492 PRINTS PR00419 Adrenodoxin reductase family signature 11 33 2.4E-6 T 14-10-2018 Amir_3809 d045199604f67320824ef187ed9347a1 492 PRINTS PR00419 Adrenodoxin reductase family signature 34 47 2.4E-6 T 14-10-2018 Amir_3809 d045199604f67320824ef187ed9347a1 492 Pfam PF01593 Flavin containing amine oxidoreductase 19 488 6.8E-38 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Amir_3809 d045199604f67320824ef187ed9347a1 492 SUPERFAMILY SSF51905 11 488 4.03E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3809 d045199604f67320824ef187ed9347a1 492 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 12 490 8.1E-146 T 14-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 Amir_3809 d045199604f67320824ef187ed9347a1 492 Gene3D G3DSA:3.50.50.60 9 124 1.6E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3809 d045199604f67320824ef187ed9347a1 492 Gene3D G3DSA:3.50.50.60 201 328 2.6E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1060 c26d7f6d7c7f2a334cda01ab004cd301 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 240 253 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Amir_1060 c26d7f6d7c7f2a334cda01ab004cd301 308 PRINTS PR00990 Ribokinase signature 31 50 3.3E-6 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_1060 c26d7f6d7c7f2a334cda01ab004cd301 308 PRINTS PR00990 Ribokinase signature 167 182 3.3E-6 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_1060 c26d7f6d7c7f2a334cda01ab004cd301 308 PRINTS PR00990 Ribokinase signature 211 222 3.3E-6 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_1060 c26d7f6d7c7f2a334cda01ab004cd301 308 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 288 1.3E-85 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Amir_1060 c26d7f6d7c7f2a334cda01ab004cd301 308 SUPERFAMILY SSF53613 2 286 1.01E-52 T 14-10-2018 IPR029056 Ribokinase-like Amir_1060 c26d7f6d7c7f2a334cda01ab004cd301 308 Pfam PF00294 pfkB family carbohydrate kinase 22 283 4.8E-36 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Amir_1060 c26d7f6d7c7f2a334cda01ab004cd301 308 PIRSF PIRSF000535 1 297 2.0E-63 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Amir_1060 c26d7f6d7c7f2a334cda01ab004cd301 308 Gene3D G3DSA:3.40.1190.20 1 299 5.7E-88 T 14-10-2018 IPR029056 Ribokinase-like Amir_1440 41ca67b7f624422e98a1a27414484aca 300 Gene3D G3DSA:1.10.20.140 111 180 2.0E-88 T 14-10-2018 Amir_1440 41ca67b7f624422e98a1a27414484aca 300 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 4 296 27.318 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Amir_1440 41ca67b7f624422e98a1a27414484aca 300 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 5 286 4.4E-73 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Amir_1440 41ca67b7f624422e98a1a27414484aca 300 Pfam PF01715 IPP transferase 37 279 5.1E-72 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Amir_1440 41ca67b7f624422e98a1a27414484aca 300 SUPERFAMILY SSF52540 5 144 3.06E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1440 41ca67b7f624422e98a1a27414484aca 300 Gene3D G3DSA:3.40.50.300 8 284 2.0E-88 T 14-10-2018 Amir_6071 efaf81ebc03d5b70636d5759ccf7bb99 835 SUPERFAMILY SSF53756 4 730 1.26E-193 T 14-10-2018 Amir_6071 efaf81ebc03d5b70636d5759ccf7bb99 835 Pfam PF11897 Protein of unknown function (DUF3417) 13 125 1.6E-30 T 14-10-2018 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Amir_6071 efaf81ebc03d5b70636d5759ccf7bb99 835 Gene3D G3DSA:3.40.50.2000 272 432 7.3E-14 T 14-10-2018 Amir_6071 efaf81ebc03d5b70636d5759ccf7bb99 835 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 587 599 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Amir_6071 efaf81ebc03d5b70636d5759ccf7bb99 835 PIRSF PIRSF000460 1 783 7.9E-250 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Amir_6071 efaf81ebc03d5b70636d5759ccf7bb99 835 Pfam PF00343 Carbohydrate phosphorylase 130 175 3.6E-5 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Amir_6071 efaf81ebc03d5b70636d5759ccf7bb99 835 Pfam PF00343 Carbohydrate phosphorylase 281 609 5.1E-15 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Amir_6071 efaf81ebc03d5b70636d5759ccf7bb99 835 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 113 697 5.2E-228 T 14-10-2018 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Amir_6071 efaf81ebc03d5b70636d5759ccf7bb99 835 Gene3D G3DSA:3.40.50.2000 112 218 2.4E-10 T 14-10-2018 Amir_6071 efaf81ebc03d5b70636d5759ccf7bb99 835 Gene3D G3DSA:3.40.50.2000 439 624 8.8E-35 T 14-10-2018 Amir_6482 b4f03a33fd772a2ca94a4e8c66529b7d 591 Gene3D G3DSA:3.30.200.20 14 97 3.4E-20 T 14-10-2018 Amir_6482 b4f03a33fd772a2ca94a4e8c66529b7d 591 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 23 46 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_6482 b4f03a33fd772a2ca94a4e8c66529b7d 591 SMART SM00220 17 278 1.3E-52 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_6482 b4f03a33fd772a2ca94a4e8c66529b7d 591 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 137 149 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_6482 b4f03a33fd772a2ca94a4e8c66529b7d 591 Gene3D G3DSA:1.10.510.10 99 277 1.2E-39 T 14-10-2018 Amir_6482 b4f03a33fd772a2ca94a4e8c66529b7d 591 Pfam PF00069 Protein kinase domain 19 218 9.8E-42 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_6482 b4f03a33fd772a2ca94a4e8c66529b7d 591 SUPERFAMILY SSF56112 20 362 1.95E-68 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_4490 1e032f39ed1379ad9114600cc06fafc1 502 Gene3D G3DSA:3.40.50.12780 12 399 1.4E-94 T 14-10-2018 Amir_4490 1e032f39ed1379ad9114600cc06fafc1 502 SUPERFAMILY SSF56801 18 495 6.02E-111 T 14-10-2018 Amir_4490 1e032f39ed1379ad9114600cc06fafc1 502 Pfam PF00501 AMP-binding enzyme 21 405 8.4E-67 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4490 1e032f39ed1379ad9114600cc06fafc1 502 Pfam PF13193 AMP-binding enzyme C-terminal domain 413 488 1.3E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_4490 1e032f39ed1379ad9114600cc06fafc1 502 Gene3D G3DSA:3.30.300.30 400 500 2.5E-25 T 14-10-2018 Amir_4490 1e032f39ed1379ad9114600cc06fafc1 502 ProSitePatterns PS00455 Putative AMP-binding domain signature. 147 158 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_5480 b1c97f5fb974a987225510ac04207d6c 429 Gene3D G3DSA:2.40.37.20 39 429 1.6E-131 T 14-10-2018 Amir_5480 b1c97f5fb974a987225510ac04207d6c 429 SUPERFAMILY SSF51419 55 276 1.52E-21 T 14-10-2018 IPR029066 PLP-binding barrel Amir_5480 b1c97f5fb974a987225510ac04207d6c 429 Pfam PF01168 Alanine racemase, N-terminal domain 55 269 5.9E-13 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_5480 b1c97f5fb974a987225510ac04207d6c 429 SMART SM01119 320 417 5.8E-34 T 14-10-2018 IPR026956 D-serine dehydratase-like domain Amir_5480 b1c97f5fb974a987225510ac04207d6c 429 Pfam PF14031 Putative serine dehydratase domain 320 416 6.2E-14 T 14-10-2018 IPR026956 D-serine dehydratase-like domain Amir_5480 b1c97f5fb974a987225510ac04207d6c 429 Gene3D G3DSA:3.20.20.10 57 300 1.6E-131 T 14-10-2018 IPR029066 PLP-binding barrel Amir_2660 02d1ebd9ffb04682961e8471377ee502 448 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 6 345 1.2E-92 T 14-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase Amir_2660 02d1ebd9ffb04682961e8471377ee502 448 SUPERFAMILY SSF51905 189 344 1.48E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2660 02d1ebd9ffb04682961e8471377ee502 448 SUPERFAMILY SSF51905 8 236 3.83E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2660 02d1ebd9ffb04682961e8471377ee502 448 Gene3D G3DSA:3.50.50.60 1 425 2.7E-127 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 ProSitePatterns PS00433 Phosphofructokinase signature. 270 288 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 181 198 9.6E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 143 161 9.6E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 163 179 9.6E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 125 142 9.6E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 98 114 9.6E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 10 29 9.6E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 266 288 9.6E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 36 49 9.6E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 216 228 9.6E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 6 346 44.144 T 14-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 Pfam PF00365 Phosphofructokinase 7 301 1.5E-103 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 SUPERFAMILY SSF53784 3 338 7.32E-123 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 Gene3D G3DSA:3.40.50.460 145 282 2.6E-112 T 14-10-2018 Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 TIGRFAM TIGR02483 PFK_mixed: phosphofructokinase 7 326 7.3E-151 T 14-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 Gene3D G3DSA:3.40.50.450 8 327 2.6E-112 T 14-10-2018 Amir_1394 ccc3cfd032dfcf40850376664aed3fbe 346 PIRSF PIRSF000532 4 344 5.0E-122 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Amir_5416 8db092dac0f1976334c5339ce6d065d4 195 SUPERFAMILY SSF52540 16 190 2.06E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5416 8db092dac0f1976334c5339ce6d065d4 195 Pfam PF03029 Conserved hypothetical ATP binding protein 21 188 8.2E-27 T 14-10-2018 IPR004130 GPN-loop GTPase Amir_5416 8db092dac0f1976334c5339ce6d065d4 195 Gene3D G3DSA:3.40.50.300 10 191 6.4E-18 T 14-10-2018 Amir_2501 374e505600a997432651d953b54cdfae 154 SMART SM00754 33 152 1.2E-10 T 14-10-2018 IPR010895 CHRD Amir_2501 374e505600a997432651d953b54cdfae 154 Pfam PF07452 CHRD domain 37 150 3.1E-17 T 14-10-2018 IPR010895 CHRD Amir_1005 96242f759bdd1c5d58084cc4bb777fa7 99 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 2 99 17.613 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Amir_1005 96242f759bdd1c5d58084cc4bb777fa7 99 SUPERFAMILY SSF54736 22 97 3.92E-24 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Amir_1005 96242f759bdd1c5d58084cc4bb777fa7 99 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 93 1.2E-22 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 Amir_1005 96242f759bdd1c5d58084cc4bb777fa7 99 Gene3D G3DSA:3.30.1390.10 2 96 3.2E-19 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Amir_3708 8e9d4859caffc76c0f1361c6fb245128 521 SMART SM00642 18 426 2.7E-89 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_3708 8e9d4859caffc76c0f1361c6fb245128 521 SUPERFAMILY SSF51011 438 514 5.12E-7 T 14-10-2018 Amir_3708 8e9d4859caffc76c0f1361c6fb245128 521 Gene3D G3DSA:3.20.20.80 10 407 2.3E-166 T 14-10-2018 Amir_3708 8e9d4859caffc76c0f1361c6fb245128 521 Pfam PF00128 Alpha amylase, catalytic domain 33 385 3.5E-67 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_3708 8e9d4859caffc76c0f1361c6fb245128 521 Gene3D G3DSA:2.60.40.1180 436 516 2.9E-7 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_3708 8e9d4859caffc76c0f1361c6fb245128 521 Gene3D G3DSA:3.90.400.10 108 177 2.3E-166 T 14-10-2018 Amir_3708 8e9d4859caffc76c0f1361c6fb245128 521 SUPERFAMILY SSF51445 9 433 7.79E-109 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_3733 0b59c17ea4d121d291dbbb9faa3bf358 271 SUPERFAMILY SSF56747 5 161 4.71E-30 T 14-10-2018 Amir_3733 0b59c17ea4d121d291dbbb9faa3bf358 271 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 7 153 4.8E-41 T 14-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal Amir_3733 0b59c17ea4d121d291dbbb9faa3bf358 271 SMART SM00943 7 154 4.2E-44 T 14-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal Amir_6903 47047bb8f18931122695634b9bbab3a4 419 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 2 411 1.3E-143 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amir_6903 47047bb8f18931122695634b9bbab3a4 419 Gene3D G3DSA:3.30.470.20 183 321 4.8E-53 T 14-10-2018 Amir_6903 47047bb8f18931122695634b9bbab3a4 419 Gene3D G3DSA:3.90.600.10 322 412 2.6E-26 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amir_6903 47047bb8f18931122695634b9bbab3a4 419 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 411 39.078 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amir_6903 47047bb8f18931122695634b9bbab3a4 419 SMART SM01210 322 411 9.2E-40 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amir_6903 47047bb8f18931122695634b9bbab3a4 419 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 287 2.8E-67 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amir_6903 47047bb8f18931122695634b9bbab3a4 419 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 281 288 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amir_6903 47047bb8f18931122695634b9bbab3a4 419 SUPERFAMILY SSF51246 320 411 4.63E-24 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Amir_6903 47047bb8f18931122695634b9bbab3a4 419 Gene3D G3DSA:3.40.50.20 1 93 2.8E-30 T 14-10-2018 Amir_6903 47047bb8f18931122695634b9bbab3a4 419 SMART SM01209 101 287 3.2E-108 T 14-10-2018 Amir_6903 47047bb8f18931122695634b9bbab3a4 419 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 2 100 3.7E-29 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amir_6903 47047bb8f18931122695634b9bbab3a4 419 Gene3D G3DSA:3.30.1490.20 121 182 1.2E-10 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amir_6903 47047bb8f18931122695634b9bbab3a4 419 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 323 409 3.6E-27 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amir_6903 47047bb8f18931122695634b9bbab3a4 419 SUPERFAMILY SSF56059 102 309 4.47E-52 T 14-10-2018 Amir_6903 47047bb8f18931122695634b9bbab3a4 419 SUPERFAMILY SSF52440 2 101 5.61E-30 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amir_3384 a3b330b97425abd25b48427ef570802e 735 Pfam PF01968 Hydantoinase/oxoprolinase 215 523 1.7E-68 T 14-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Amir_3384 a3b330b97425abd25b48427ef570802e 735 SUPERFAMILY SSF53067 29 518 6.83E-11 T 14-10-2018 Amir_3384 a3b330b97425abd25b48427ef570802e 735 Gene3D G3DSA:3.30.420.40 26 138 7.5E-6 T 14-10-2018 Amir_3384 a3b330b97425abd25b48427ef570802e 735 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 28 196 3.7E-25 T 14-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Amir_6005 3576c692f85ee74280835831cfe1f511 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 191 38.251 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Amir_6005 3576c692f85ee74280835831cfe1f511 200 Pfam PF00694 Aconitase C-terminal domain 1 115 1.1E-22 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Amir_6005 3576c692f85ee74280835831cfe1f511 200 Gene3D G3DSA:3.20.19.10 1 168 1.0E-65 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Amir_6005 3576c692f85ee74280835831cfe1f511 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 180 9.6E-54 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Amir_6005 3576c692f85ee74280835831cfe1f511 200 SUPERFAMILY SSF52016 1 188 5.49E-51 T 14-10-2018 Amir_0892 09629750552c3d900a46e3e514d28a00 222 TIGRFAM TIGR01915 npdG: NADPH-dependent F420 reductase 7 219 2.0E-73 T 14-10-2018 IPR010185 NADPH-dependent F420 reductase GO:0006740|GO:0016651|GO:0050661|GO:0055114|GO:0070967 Amir_0892 09629750552c3d900a46e3e514d28a00 222 SUPERFAMILY SSF51735 8 216 5.12E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0892 09629750552c3d900a46e3e514d28a00 222 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 9 105 4.2E-20 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Amir_0892 09629750552c3d900a46e3e514d28a00 222 Gene3D G3DSA:3.40.50.720 7 219 5.0E-53 T 14-10-2018 Amir_0594 dd146d3ff0820ff59be7ff098ebd0c96 525 SMART SM00487 119 328 1.3E-10 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_0594 dd146d3ff0820ff59be7ff098ebd0c96 525 Pfam PF04851 Type III restriction enzyme, res subunit 122 289 4.0E-17 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Amir_0594 dd146d3ff0820ff59be7ff098ebd0c96 525 Gene3D G3DSA:3.40.50.300 114 310 3.7E-21 T 14-10-2018 Amir_0594 dd146d3ff0820ff59be7ff098ebd0c96 525 SMART SM00490 404 487 0.0043 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_0594 dd146d3ff0820ff59be7ff098ebd0c96 525 Gene3D G3DSA:3.40.50.300 323 506 3.1E-26 T 14-10-2018 Amir_0594 dd146d3ff0820ff59be7ff098ebd0c96 525 SUPERFAMILY SSF52540 134 490 3.52E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0594 dd146d3ff0820ff59be7ff098ebd0c96 525 Pfam PF00271 Helicase conserved C-terminal domain 380 486 1.3E-10 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_0542 533e1773c11644528523c7965fc320a7 932 Pfam PF01580 FtsK/SpoIIIE family 371 566 1.3E-20 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Amir_0542 533e1773c11644528523c7965fc320a7 932 SUPERFAMILY SSF52540 360 591 3.83E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0542 533e1773c11644528523c7965fc320a7 932 Gene3D G3DSA:3.40.50.300 358 653 2.1E-50 T 14-10-2018 Amir_0542 533e1773c11644528523c7965fc320a7 932 Gene3D G3DSA:3.40.50.300 133 314 1.0E-7 T 14-10-2018 Amir_2183 e019963f0db8cb35188bfbf80f825132 221 Pfam PF14317 YcxB-like protein 152 213 1.2E-6 T 14-10-2018 IPR025588 YcxB-like protein Amir_6161 00457231917df442a306b7b4045747be 1426 Pfam PF07971 Glycosyl hydrolase family 92 612 1136 5.4E-155 T 14-10-2018 IPR012939 Glycosyl hydrolase family 92 Amir_6161 00457231917df442a306b7b4045747be 1426 Gene3D G3DSA:1.20.1610.10 835 1010 5.2E-258 T 14-10-2018 Amir_6161 00457231917df442a306b7b4045747be 1426 Gene3D G3DSA:1.20.1050.60 741 834 5.2E-258 T 14-10-2018 Amir_6161 00457231917df442a306b7b4045747be 1426 SUPERFAMILY SSF48208 638 1119 4.59E-18 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_6161 00457231917df442a306b7b4045747be 1426 Gene3D G3DSA:2.70.98.10 404 740 5.2E-258 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Amir_6161 00457231917df442a306b7b4045747be 1426 Gene3D G3DSA:2.60.120.260 1163 1282 3.9E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_6161 00457231917df442a306b7b4045747be 1426 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 399 1139 1.2E-151 T 14-10-2018 IPR005887 Alpha-1,2-mannosidase, putative Amir_6161 00457231917df442a306b7b4045747be 1426 Gene3D G3DSA:3.30.2080.10 672 1140 5.2E-258 T 14-10-2018 Amir_6161 00457231917df442a306b7b4045747be 1426 Pfam PF00754 F5/8 type C domain 96 216 2.0E-12 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain Amir_6161 00457231917df442a306b7b4045747be 1426 SUPERFAMILY SSF49785 100 211 3.83E-15 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_6161 00457231917df442a306b7b4045747be 1426 Gene3D G3DSA:2.60.120.260 84 224 2.1E-19 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5473 1503521e8a33fda1a00b3f585a659624 204 ProSitePatterns PS00938 Initiation factor 3 signature. 68 81 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 Amir_5473 1503521e8a33fda1a00b3f585a659624 204 SUPERFAMILY SSF54364 15 88 1.7E-28 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Amir_5473 1503521e8a33fda1a00b3f585a659624 204 Gene3D G3DSA:3.30.110.10 89 188 2.5E-33 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Amir_5473 1503521e8a33fda1a00b3f585a659624 204 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 17 85 4.1E-30 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Amir_5473 1503521e8a33fda1a00b3f585a659624 204 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 5 180 29.68 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Amir_5473 1503521e8a33fda1a00b3f585a659624 204 SUPERFAMILY SSF55200 95 179 3.27E-30 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Amir_5473 1503521e8a33fda1a00b3f585a659624 204 Gene3D G3DSA:3.10.20.80 11 88 1.9E-31 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Amir_5473 1503521e8a33fda1a00b3f585a659624 204 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 94 177 9.2E-34 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Amir_5473 1503521e8a33fda1a00b3f585a659624 204 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 17 179 1.5E-61 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Amir_5555 06037369864598cfdb49a7da8635765f 155 Pfam PF13560 Helix-turn-helix domain 12 75 1.5E-7 T 14-10-2018 Amir_5555 06037369864598cfdb49a7da8635765f 155 SUPERFAMILY SSF47413 11 77 8.94E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_5555 06037369864598cfdb49a7da8635765f 155 Gene3D G3DSA:1.10.260.40 2 74 1.6E-9 T 14-10-2018 Amir_5555 06037369864598cfdb49a7da8635765f 155 SMART SM00530 15 76 2.4E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_3996 52767f7275dc53e937b111b4bd713b07 145 Gene3D G3DSA:3.60.20.10 1 59 7.3E-10 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_3996 52767f7275dc53e937b111b4bd713b07 145 Pfam PF06267 Family of unknown function (DUF1028) 1 57 3.2E-10 T 14-10-2018 IPR010430 Protein of unknown function DUF1028 Amir_3996 52767f7275dc53e937b111b4bd713b07 145 SUPERFAMILY SSF56235 1 56 4.48E-8 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_3904 cf588e730bac2bf3d782706e53d7b4a1 284 Pfam PF13560 Helix-turn-helix domain 5 80 2.4E-15 T 14-10-2018 Amir_3904 cf588e730bac2bf3d782706e53d7b4a1 284 Gene3D G3DSA:3.30.450.180 104 279 7.7E-7 T 14-10-2018 Amir_3904 cf588e730bac2bf3d782706e53d7b4a1 284 Gene3D G3DSA:1.10.260.40 2 81 1.1E-10 T 14-10-2018 Amir_3904 cf588e730bac2bf3d782706e53d7b4a1 284 SMART SM00530 9 79 3.5E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_3904 cf588e730bac2bf3d782706e53d7b4a1 284 SUPERFAMILY SSF47413 28 77 1.27E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1811 6fc628ceb6eee3e37fbba048c2836110 442 Gene3D G3DSA:3.50.50.100 1 397 1.7E-103 T 14-10-2018 Amir_1811 6fc628ceb6eee3e37fbba048c2836110 442 SUPERFAMILY SSF51905 5 343 2.02E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1811 6fc628ceb6eee3e37fbba048c2836110 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 163 188 2.2E-5 T 14-10-2018 Amir_1811 6fc628ceb6eee3e37fbba048c2836110 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 2.2E-5 T 14-10-2018 Amir_1811 6fc628ceb6eee3e37fbba048c2836110 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.2E-5 T 14-10-2018 Amir_1811 6fc628ceb6eee3e37fbba048c2836110 442 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 332 3.9E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_1811 6fc628ceb6eee3e37fbba048c2836110 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 163 181 3.1E-10 T 14-10-2018 Amir_1811 6fc628ceb6eee3e37fbba048c2836110 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 3.1E-10 T 14-10-2018 Amir_1811 6fc628ceb6eee3e37fbba048c2836110 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.1E-10 T 14-10-2018 Amir_1811 6fc628ceb6eee3e37fbba048c2836110 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 3.1E-10 T 14-10-2018 Amir_6470 1aa8f414e428cf6f7d122db1129f744f 339 Pfam PF00579 tRNA synthetases class I (W and Y) 12 290 3.4E-83 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_6470 1aa8f414e428cf6f7d122db1129f744f 339 Gene3D G3DSA:1.10.240.10 196 304 2.4E-130 T 14-10-2018 Amir_6470 1aa8f414e428cf6f7d122db1129f744f 339 Gene3D G3DSA:3.40.50.620 15 335 2.4E-130 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_6470 1aa8f414e428cf6f7d122db1129f744f 339 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 12 336 1.8E-109 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Amir_6470 1aa8f414e428cf6f7d122db1129f744f 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 205 215 1.2E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Amir_6470 1aa8f414e428cf6f7d122db1129f744f 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 26 42 1.2E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Amir_6470 1aa8f414e428cf6f7d122db1129f744f 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 76 95 1.2E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Amir_6470 1aa8f414e428cf6f7d122db1129f744f 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 1.2E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Amir_6470 1aa8f414e428cf6f7d122db1129f744f 339 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 12 337 41.626 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 Amir_6470 1aa8f414e428cf6f7d122db1129f744f 339 SUPERFAMILY SSF52374 13 336 3.09E-98 T 14-10-2018 Amir_6470 1aa8f414e428cf6f7d122db1129f744f 339 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 21 31 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_0817 9d14bbe54979efa3d9510b893a849979 355 Pfam PF10094 Uncharacterized protein conserved in bacteria (DUF2332) 8 353 5.9E-102 T 14-10-2018 IPR011200 Uncharacterised conserved protein UCP012608 Amir_5586 0a557160106c97517a9ca99ae9db3e29 247 SUPERFAMILY SSF53271 44 245 3.02E-15 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Amir_5586 0a557160106c97517a9ca99ae9db3e29 247 Pfam PF00156 Phosphoribosyl transferase domain 198 243 2.4E-8 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Amir_5586 0a557160106c97517a9ca99ae9db3e29 247 Gene3D G3DSA:3.40.50.2020 163 246 1.3E-11 T 14-10-2018 Amir_3558 10eb183842804d68a4ea9507df7b1812 167 Pfam PF04542 Sigma-70 region 2 9 74 2.9E-6 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_3558 10eb183842804d68a4ea9507df7b1812 167 SUPERFAMILY SSF88946 5 80 7.85E-11 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_3558 10eb183842804d68a4ea9507df7b1812 167 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 4 160 9.7E-44 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 Amir_3558 10eb183842804d68a4ea9507df7b1812 167 SUPERFAMILY SSF88659 94 157 2.43E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_3558 10eb183842804d68a4ea9507df7b1812 167 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 158 8.4E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_3558 10eb183842804d68a4ea9507df7b1812 167 Gene3D G3DSA:1.10.10.10 87 162 1.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3558 10eb183842804d68a4ea9507df7b1812 167 Gene3D G3DSA:1.10.1740.10 2 77 2.4E-9 T 14-10-2018 Amir_3558 10eb183842804d68a4ea9507df7b1812 167 Pfam PF08281 Sigma-70, region 4 102 155 1.2E-18 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_6216 171e61685054c857dbe975a60b36988a 255 Gene3D G3DSA:3.40.50.720 10 208 2.7E-49 T 14-10-2018 Amir_6216 171e61685054c857dbe975a60b36988a 255 SUPERFAMILY SSF51735 16 207 4.08E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6216 171e61685054c857dbe975a60b36988a 255 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 16 104 1.3E-15 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Amir_4042 63c7249773e917989ac1bc6373026b07 379 SMART SM00922 157 254 1.3E-27 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Amir_4042 63c7249773e917989ac1bc6373026b07 379 SUPERFAMILY SSF51604 125 366 3.28E-71 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_4042 63c7249773e917989ac1bc6373026b07 379 Gene3D G3DSA:3.20.20.120 130 362 6.8E-155 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_4042 63c7249773e917989ac1bc6373026b07 379 SUPERFAMILY SSF54826 9 138 4.27E-28 T 14-10-2018 Amir_4042 63c7249773e917989ac1bc6373026b07 379 Pfam PF13378 Enolase C-terminal domain-like 166 364 1.8E-64 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Amir_4042 63c7249773e917989ac1bc6373026b07 379 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 43 137 9.6E-15 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Amir_4042 63c7249773e917989ac1bc6373026b07 379 Gene3D G3DSA:3.30.390.10 10 365 6.8E-155 T 14-10-2018 IPR029017 Enolase-like, N-terminal Amir_4042 63c7249773e917989ac1bc6373026b07 379 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 204 235 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Amir_4117 b847d94026374280193ca9282a506e0a 655 Pfam PF07593 ASPIC and UnbV 575 633 1.4E-12 T 14-10-2018 IPR011519 ASPIC/UnbV Amir_4117 b847d94026374280193ca9282a506e0a 655 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 295 369 5.4E-7 T 14-10-2018 Amir_4117 b847d94026374280193ca9282a506e0a 655 SUPERFAMILY SSF69318 70 543 3.66E-52 T 14-10-2018 Amir_6888 6afceed18ba3bb8d4d9bf5c5cdbfe391 476 Pfam PF10397 Adenylosuccinate lyase C-terminus 369 453 1.3E-12 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amir_6888 6afceed18ba3bb8d4d9bf5c5cdbfe391 476 Gene3D G3DSA:1.20.200.10 13 450 5.1E-143 T 14-10-2018 Amir_6888 6afceed18ba3bb8d4d9bf5c5cdbfe391 476 PRINTS PR00149 Fumarate lyase superfamily signature 97 115 9.9E-11 T 14-10-2018 IPR000362 Fumarate lyase family Amir_6888 6afceed18ba3bb8d4d9bf5c5cdbfe391 476 PRINTS PR00149 Fumarate lyase superfamily signature 236 263 9.9E-11 T 14-10-2018 IPR000362 Fumarate lyase family Amir_6888 6afceed18ba3bb8d4d9bf5c5cdbfe391 476 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 9.9E-11 T 14-10-2018 IPR000362 Fumarate lyase family Amir_6888 6afceed18ba3bb8d4d9bf5c5cdbfe391 476 PRINTS PR00149 Fumarate lyase superfamily signature 142 160 9.9E-11 T 14-10-2018 IPR000362 Fumarate lyase family Amir_6888 6afceed18ba3bb8d4d9bf5c5cdbfe391 476 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Amir_6888 6afceed18ba3bb8d4d9bf5c5cdbfe391 476 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 10 453 3.0E-126 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amir_6888 6afceed18ba3bb8d4d9bf5c5cdbfe391 476 SUPERFAMILY SSF48557 9 454 2.8E-80 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Amir_6888 6afceed18ba3bb8d4d9bf5c5cdbfe391 476 Gene3D G3DSA:1.10.40.30 366 442 5.1E-143 T 14-10-2018 Amir_6888 6afceed18ba3bb8d4d9bf5c5cdbfe391 476 Gene3D G3DSA:1.10.275.60 24 233 5.1E-143 T 14-10-2018 Amir_6888 6afceed18ba3bb8d4d9bf5c5cdbfe391 476 SMART SM00998 368 454 4.4E-19 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amir_6888 6afceed18ba3bb8d4d9bf5c5cdbfe391 476 Pfam PF00206 Lyase 35 303 5.4E-21 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Amir_5287 169d12ca72be80e5c8f3df0aab2c2f95 493 SUPERFAMILY SSF55931 38 459 3.92E-56 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amir_5287 169d12ca72be80e5c8f3df0aab2c2f95 493 PIRSF PIRSF012666 1 492 6.5E-220 T 14-10-2018 IPR016602 Uncharacterised conserved protein UCP012666 Amir_5287 169d12ca72be80e5c8f3df0aab2c2f95 493 Gene3D G3DSA:3.30.590.20 39 466 1.3E-57 T 14-10-2018 Amir_0559 55332e67860e054b9a9759122bca8848 788 Gene3D G3DSA:1.10.10.10 654 786 1.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0559 55332e67860e054b9a9759122bca8848 788 ProSitePatterns PS00622 LuxR-type HTH domain signature. 743 770 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0559 55332e67860e054b9a9759122bca8848 788 Pfam PF00196 Bacterial regulatory proteins, luxR family 729 780 2.3E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0559 55332e67860e054b9a9759122bca8848 788 Gene3D G3DSA:1.25.40.10 308 595 3.5E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0559 55332e67860e054b9a9759122bca8848 788 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 729 743 2.2E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0559 55332e67860e054b9a9759122bca8848 788 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 759 771 2.2E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0559 55332e67860e054b9a9759122bca8848 788 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 743 759 2.2E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0559 55332e67860e054b9a9759122bca8848 788 SUPERFAMILY SSF46894 723 782 1.02E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_0559 55332e67860e054b9a9759122bca8848 788 SUPERFAMILY SSF52540 9 76 3.6E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0559 55332e67860e054b9a9759122bca8848 788 SMART SM00421 726 783 6.2E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3220 92c2a8890f8bc382bbeeb4019ed9c4bb 206 Pfam PF16316 Domain of unknown function (DUF4956) 10 179 5.2E-54 T 14-10-2018 IPR032531 Protein of unknown function DUF4956 Amir_2000 a5725800ebc3189b03cf2c183202a186 382 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 33 376 2.1E-96 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Amir_2000 a5725800ebc3189b03cf2c183202a186 382 SUPERFAMILY SSF56796 30 378 1.31E-94 T 14-10-2018 Amir_2000 a5725800ebc3189b03cf2c183202a186 382 PIRSF PIRSF001455 24 381 1.1E-93 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Amir_2000 a5725800ebc3189b03cf2c183202a186 382 Pfam PF01761 3-dehydroquinate synthase 87 334 8.2E-87 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Amir_2000 a5725800ebc3189b03cf2c183202a186 382 Gene3D G3DSA:1.20.1090.10 192 382 4.9E-52 T 14-10-2018 Amir_2000 a5725800ebc3189b03cf2c183202a186 382 Gene3D G3DSA:3.40.50.1970 13 191 1.9E-55 T 14-10-2018 Amir_0776 ca604db77dfd55c31d451dfb05fedc20 517 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 62 292 2.2E-27 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 Amir_0776 ca604db77dfd55c31d451dfb05fedc20 517 Gene3D G3DSA:3.40.50.1820 36 219 1.5E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0776 ca604db77dfd55c31d451dfb05fedc20 517 SMART SM00939 311 512 1.4E-12 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 Amir_0776 ca604db77dfd55c31d451dfb05fedc20 517 SUPERFAMILY SSF53474 10 330 1.74E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0776 ca604db77dfd55c31d451dfb05fedc20 517 SUPERFAMILY SSF49785 339 515 6.16E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_0776 ca604db77dfd55c31d451dfb05fedc20 517 Gene3D G3DSA:2.60.120.260 371 517 2.8E-7 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_0776 ca604db77dfd55c31d451dfb05fedc20 517 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 323 494 3.3E-6 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 Amir_0776 ca604db77dfd55c31d451dfb05fedc20 517 Gene3D G3DSA:3.40.50.1820 231 370 8.0E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3732 ee24d8006551d6784472ed3eb1379bf4 283 SUPERFAMILY SSF100950 80 238 4.33E-24 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Amir_3732 ee24d8006551d6784472ed3eb1379bf4 283 Pfam PF00455 DeoR C terminal sensor domain 79 235 6.1E-42 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain Amir_3732 ee24d8006551d6784472ed3eb1379bf4 283 Gene3D G3DSA:1.10.10.10 3 61 2.0E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3732 ee24d8006551d6784472ed3eb1379bf4 283 SMART SM01134 76 237 6.2E-54 T 14-10-2018 Amir_3732 ee24d8006551d6784472ed3eb1379bf4 283 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Amir_3732 ee24d8006551d6784472ed3eb1379bf4 283 SUPERFAMILY SSF46785 7 62 1.11E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3732 ee24d8006551d6784472ed3eb1379bf4 283 Pfam PF08220 DeoR-like helix-turn-helix domain 9 63 1.5E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_3732 ee24d8006551d6784472ed3eb1379bf4 283 SMART SM00420 9 61 1.2E-11 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 SUPERFAMILY SSF56719 411 651 1.99E-83 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 SUPERFAMILY SSF54211 238 408 6.83E-60 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 Gene3D G3DSA:3.30.230.10 237 409 4.2E-74 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 8 657 6.1E-292 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 SMART SM00433 37 650 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 Gene3D G3DSA:3.40.50.670 415 657 3.4E-99 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 176 2.4E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 588 645 1.7E-28 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 Pfam PF01751 Toprim domain 436 547 4.1E-16 T 14-10-2018 IPR006171 TOPRIM domain Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR01159 DNA gyrase subunit B signature 197 210 2.0E-70 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR01159 DNA gyrase subunit B signature 626 642 2.0E-70 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR01159 DNA gyrase subunit B signature 237 259 2.0E-70 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR01159 DNA gyrase subunit B signature 377 391 2.0E-70 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR01159 DNA gyrase subunit B signature 182 197 2.0E-70 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR01159 DNA gyrase subunit B signature 8 18 2.0E-70 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR01159 DNA gyrase subunit B signature 610 622 2.0E-70 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR01159 DNA gyrase subunit B signature 329 345 2.0E-70 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR01159 DNA gyrase subunit B signature 487 496 2.0E-70 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR01159 DNA gyrase subunit B signature 391 411 2.0E-70 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 Gene3D G3DSA:3.30.565.10 4 220 2.1E-84 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 5 657 91.712 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR00418 DNA topoisomerase II family signature 437 451 1.3E-69 T 14-10-2018 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR00418 DNA topoisomerase II family signature 521 538 1.3E-69 T 14-10-2018 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR00418 DNA topoisomerase II family signature 541 553 1.3E-69 T 14-10-2018 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR00418 DNA topoisomerase II family signature 115 129 1.3E-69 T 14-10-2018 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR00418 DNA topoisomerase II family signature 37 52 1.3E-69 T 14-10-2018 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR00418 DNA topoisomerase II family signature 285 298 1.3E-69 T 14-10-2018 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR00418 DNA topoisomerase II family signature 72 85 1.3E-69 T 14-10-2018 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR00418 DNA topoisomerase II family signature 503 519 1.3E-69 T 14-10-2018 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 PRINTS PR00418 DNA topoisomerase II family signature 589 605 1.3E-69 T 14-10-2018 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 ProSitePatterns PS00177 DNA topoisomerase II signature. 439 447 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 SUPERFAMILY SSF55874 8 212 1.03E-68 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 Pfam PF00204 DNA gyrase B 238 407 1.0E-62 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amir_0006 8f7f04613b24bb19e15a1abd7786d0e6 657 SMART SM00387 33 177 5.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_6654 c9debdbdf54addc05f269251c5ebfbd9 292 Gene3D G3DSA:3.90.550.10 1 292 2.6E-77 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_6654 c9debdbdf54addc05f269251c5ebfbd9 292 SUPERFAMILY SSF53448 2 286 3.15E-83 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_6654 c9debdbdf54addc05f269251c5ebfbd9 292 Pfam PF00483 Nucleotidyl transferase 2 237 2.9E-61 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Amir_6654 c9debdbdf54addc05f269251c5ebfbd9 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 9.5E-139 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Amir_1444 af2e29ac226e320eae6990cc5985abdc 491 Gene3D G3DSA:3.40.50.12160 5 135 1.6E-34 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Amir_1444 af2e29ac226e320eae6990cc5985abdc 491 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 5 445 66.682 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Amir_1444 af2e29ac226e320eae6990cc5985abdc 491 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 6 417 1.5E-141 T 14-10-2018 Amir_1444 af2e29ac226e320eae6990cc5985abdc 491 Gene3D G3DSA:3.80.30.20 146 380 3.0E-87 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amir_1444 af2e29ac226e320eae6990cc5985abdc 491 Pfam PF04055 Radical SAM superfamily 152 323 7.7E-29 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_1444 af2e29ac226e320eae6990cc5985abdc 491 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 440 7.0E-148 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Amir_1444 af2e29ac226e320eae6990cc5985abdc 491 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 152 172 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Amir_1444 af2e29ac226e320eae6990cc5985abdc 491 Pfam PF00919 Uncharacterized protein family UPF0004 6 105 4.9E-29 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Amir_1444 af2e29ac226e320eae6990cc5985abdc 491 SUPERFAMILY SSF102114 133 370 1.31E-55 T 14-10-2018 Amir_1444 af2e29ac226e320eae6990cc5985abdc 491 SMART SM00729 148 366 1.0E-55 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amir_1818 8ac57b5da6f8b148caa50841fc7eb4f7 244 SUPERFAMILY SSF52091 4 115 9.22E-9 T 14-10-2018 IPR036513 STAS domain superfamily Amir_1818 8ac57b5da6f8b148caa50841fc7eb4f7 244 SUPERFAMILY SSF55874 155 242 5.86E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1818 8ac57b5da6f8b148caa50841fc7eb4f7 244 Gene3D G3DSA:3.30.565.10 124 243 9.1E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1818 8ac57b5da6f8b148caa50841fc7eb4f7 244 Gene3D G3DSA:3.30.750.24 1 118 9.9E-13 T 14-10-2018 IPR036513 STAS domain superfamily Amir_6024 a09c6eb6f77d1e562a94a3ea1fa59a96 614 SUPERFAMILY SSF143975 4 422 1.83E-136 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amir_6024 a09c6eb6f77d1e562a94a3ea1fa59a96 614 Pfam PF00920 Dehydratase family 34 608 1.3E-215 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amir_6024 a09c6eb6f77d1e562a94a3ea1fa59a96 614 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 611 45.294 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amir_6024 a09c6eb6f77d1e562a94a3ea1fa59a96 614 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 611 1.1E-239 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amir_6024 a09c6eb6f77d1e562a94a3ea1fa59a96 614 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amir_6024 a09c6eb6f77d1e562a94a3ea1fa59a96 614 Gene3D G3DSA:3.50.30.80 423 574 7.7E-55 T 14-10-2018 Amir_6024 a09c6eb6f77d1e562a94a3ea1fa59a96 614 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 511 522 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amir_6024 a09c6eb6f77d1e562a94a3ea1fa59a96 614 SUPERFAMILY SSF52016 423 612 1.33E-58 T 14-10-2018 Amir_4963 e5b2e72b6a3c1194a77e8e7ecda7ad13 877 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 449 659 1.9E-27 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 Amir_4963 e5b2e72b6a3c1194a77e8e7ecda7ad13 877 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 334 351 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 Amir_4963 e5b2e72b6a3c1194a77e8e7ecda7ad13 877 SUPERFAMILY SSF52279 449 659 2.35E-39 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Amir_4963 e5b2e72b6a3c1194a77e8e7ecda7ad13 877 PRINTS PR00133 Glycosyl hydrolase family 3 signature 334 352 5.8E-23 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4963 e5b2e72b6a3c1194a77e8e7ecda7ad13 877 PRINTS PR00133 Glycosyl hydrolase family 3 signature 218 234 5.8E-23 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4963 e5b2e72b6a3c1194a77e8e7ecda7ad13 877 PRINTS PR00133 Glycosyl hydrolase family 3 signature 172 191 5.8E-23 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4963 e5b2e72b6a3c1194a77e8e7ecda7ad13 877 PRINTS PR00133 Glycosyl hydrolase family 3 signature 257 273 5.8E-23 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4963 e5b2e72b6a3c1194a77e8e7ecda7ad13 877 PRINTS PR00133 Glycosyl hydrolase family 3 signature 148 164 5.8E-23 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4963 e5b2e72b6a3c1194a77e8e7ecda7ad13 877 Gene3D G3DSA:2.60.120.430 692 877 1.7E-6 T 14-10-2018 Amir_4963 e5b2e72b6a3c1194a77e8e7ecda7ad13 877 Gene3D G3DSA:3.20.20.300 71 434 1.1E-124 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Amir_4963 e5b2e72b6a3c1194a77e8e7ecda7ad13 877 Gene3D G3DSA:3.40.50.1700 435 663 1.3E-64 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Amir_4963 e5b2e72b6a3c1194a77e8e7ecda7ad13 877 SUPERFAMILY SSF51445 70 447 5.26E-106 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_4963 e5b2e72b6a3c1194a77e8e7ecda7ad13 877 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 85 411 9.0E-77 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4824 9559903f5845ad64a669ef410a6a6e25 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 71 1.1E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4824 9559903f5845ad64a669ef410a6a6e25 308 SUPERFAMILY SSF46785 5 118 1.51E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4824 9559903f5845ad64a669ef410a6a6e25 308 Gene3D G3DSA:1.10.10.10 11 97 2.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4824 9559903f5845ad64a669ef410a6a6e25 308 SUPERFAMILY SSF53850 97 300 1.78E-34 T 14-10-2018 Amir_4824 9559903f5845ad64a669ef410a6a6e25 308 Gene3D G3DSA:3.40.190.10 100 285 6.4E-35 T 14-10-2018 Amir_4824 9559903f5845ad64a669ef410a6a6e25 308 Gene3D G3DSA:3.40.190.10 177 274 6.4E-35 T 14-10-2018 Amir_4824 9559903f5845ad64a669ef410a6a6e25 308 Pfam PF03466 LysR substrate binding domain 96 298 9.3E-38 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_1891 92bcd8883a80cda4704bc254fb3b21e8 382 Pfam PF00534 Glycosyl transferases group 1 195 342 2.6E-30 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Amir_1891 92bcd8883a80cda4704bc254fb3b21e8 382 SUPERFAMILY SSF53756 19 365 6.63E-75 T 14-10-2018 Amir_1891 92bcd8883a80cda4704bc254fb3b21e8 382 Pfam PF13439 Glycosyltransferase Family 4 22 179 2.5E-30 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amir_1891 92bcd8883a80cda4704bc254fb3b21e8 382 Gene3D G3DSA:3.40.50.2000 5 362 6.5E-92 T 14-10-2018 Amir_1891 92bcd8883a80cda4704bc254fb3b21e8 382 Gene3D G3DSA:3.40.50.2000 175 346 6.5E-92 T 14-10-2018 Amir_3186 e8db7b3ad96b379e85e53d5f458798cf 90 Pfam PF00550 Phosphopantetheine attachment site 12 80 1.8E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3186 e8db7b3ad96b379e85e53d5f458798cf 90 SUPERFAMILY SSF47336 12 86 1.44E-13 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3186 e8db7b3ad96b379e85e53d5f458798cf 90 Gene3D G3DSA:1.10.1200.10 6 86 2.3E-16 T 14-10-2018 IPR036736 ACP-like superfamily Amir_6347 003f3527a371b50638f187949c2f37c4 330 Gene3D G3DSA:3.40.50.720 2 307 2.9E-127 T 14-10-2018 Amir_6347 003f3527a371b50638f187949c2f37c4 330 SUPERFAMILY SSF51735 1 323 2.22E-102 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6347 003f3527a371b50638f187949c2f37c4 330 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 322 1.4E-136 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Amir_6347 003f3527a371b50638f187949c2f37c4 330 Gene3D G3DSA:3.90.25.10 193 315 2.9E-127 T 14-10-2018 Amir_6347 003f3527a371b50638f187949c2f37c4 330 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 307 4.5E-83 T 14-10-2018 IPR016040 NAD(P)-binding domain Amir_1220 402f0977616b18d7ec008f63d98d2d17 510 SUPERFAMILY SSF51445 215 499 1.33E-53 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1220 402f0977616b18d7ec008f63d98d2d17 510 Gene3D G3DSA:2.60.120.260 33 164 1.3E-21 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_1220 402f0977616b18d7ec008f63d98d2d17 510 SUPERFAMILY SSF49785 33 163 3.12E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_1220 402f0977616b18d7ec008f63d98d2d17 510 ProSitePatterns PS01095 Chitinases family 18 active site. 330 338 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 Amir_1220 402f0977616b18d7ec008f63d98d2d17 510 SMART SM00636 218 491 1.7E-5 T 14-10-2018 IPR011583 Chitinase II GO:0008061 Amir_1220 402f0977616b18d7ec008f63d98d2d17 510 Gene3D G3DSA:3.20.20.80 216 509 1.1E-75 T 14-10-2018 Amir_1220 402f0977616b18d7ec008f63d98d2d17 510 Pfam PF02018 Carbohydrate binding domain 33 148 3.2E-11 T 14-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 Amir_1220 402f0977616b18d7ec008f63d98d2d17 510 Pfam PF00704 Glycosyl hydrolases family 18 221 491 1.1E-24 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 Amir_6367 f270ae0c3c026078ad863db553b7bc11 173 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 158 6.3E-66 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Amir_6367 f270ae0c3c026078ad863db553b7bc11 173 SMART SM01001 2 151 7.0E-96 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Amir_6367 f270ae0c3c026078ad863db553b7bc11 173 Gene3D G3DSA:3.40.50.7700 1 165 8.9E-74 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Amir_6367 f270ae0c3c026078ad863db553b7bc11 173 PIRSF PIRSF001338 1 162 5.9E-68 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Amir_6367 f270ae0c3c026078ad863db553b7bc11 173 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 155 33.077 T 14-10-2018 IPR033747 Class I PurE Amir_6367 f270ae0c3c026078ad863db553b7bc11 173 Pfam PF00731 AIR carboxylase 3 148 1.3E-66 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Amir_6367 f270ae0c3c026078ad863db553b7bc11 173 SUPERFAMILY SSF52255 3 161 8.37E-66 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Amir_6293 3132fcf11ea84484353b74663add396a 160 SUPERFAMILY SSF55826 8 158 1.83E-44 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Amir_6293 3132fcf11ea84484353b74663add396a 160 Pfam PF04073 Aminoacyl-tRNA editing domain 37 150 1.9E-27 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Amir_6293 3132fcf11ea84484353b74663add396a 160 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 8 159 4.6E-53 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Amir_6293 3132fcf11ea84484353b74663add396a 160 Gene3D G3DSA:3.90.960.10 2 160 2.3E-59 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Amir_6293 3132fcf11ea84484353b74663add396a 160 PIRSF PIRSF006181 4 160 1.2E-50 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Amir_0876 d4339a02fee08d94c7e26f902b855eca 218 Gene3D G3DSA:3.30.40.60 157 215 5.8E-11 T 14-10-2018 Amir_0876 d4339a02fee08d94c7e26f902b855eca 218 SMART SM00507 165 215 7.0E-9 T 14-10-2018 IPR003615 HNH nuclease Amir_0876 d4339a02fee08d94c7e26f902b855eca 218 Pfam PF14279 HNH endonuclease 178 213 1.7E-6 T 14-10-2018 IPR029471 HNH endonuclease 5 Amir_0608 e836fd5590cdcdb612f74ae72de7eca2 217 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Amir_0608 e836fd5590cdcdb612f74ae72de7eca2 217 SMART SM00855 5 165 3.8E-16 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_0608 e836fd5590cdcdb612f74ae72de7eca2 217 SUPERFAMILY SSF53254 1 202 4.19E-40 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_0608 e836fd5590cdcdb612f74ae72de7eca2 217 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 203 1.5E-35 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_0608 e836fd5590cdcdb612f74ae72de7eca2 217 Gene3D G3DSA:3.40.50.1240 3 199 6.4E-43 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_2760 da084b0d8c71648daeaed1e2ab7e1756 822 Pfam PF02687 FtsX-like permease family 725 811 3.7E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amir_3281 f8bd3c08b558e52d6394f57702028980 395 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 107 5.7E-12 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_3281 f8bd3c08b558e52d6394f57702028980 395 Gene3D G3DSA:1.10.540.10 7 109 1.3E-20 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_3281 f8bd3c08b558e52d6394f57702028980 395 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 111 202 2.5E-19 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amir_3281 f8bd3c08b558e52d6394f57702028980 395 SUPERFAMILY SSF47203 221 364 1.58E-32 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_3281 f8bd3c08b558e52d6394f57702028980 395 SUPERFAMILY SSF56645 9 214 4.58E-51 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_3281 f8bd3c08b558e52d6394f57702028980 395 Gene3D G3DSA:1.20.140.10 217 365 6.7E-34 T 14-10-2018 Amir_3281 f8bd3c08b558e52d6394f57702028980 395 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 220 363 3.7E-30 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_3281 f8bd3c08b558e52d6394f57702028980 395 Gene3D G3DSA:2.40.110.10 110 215 7.0E-27 T 14-10-2018 Amir_2103 6c59149967b7ac432fca2ca7673ff768 536 Gene3D G3DSA:1.10.10.2840 403 536 3.4E-8 T 14-10-2018 Amir_2103 6c59149967b7ac432fca2ca7673ff768 536 Pfam PF07905 Purine catabolism regulatory protein-like family 8 129 5.4E-36 T 14-10-2018 IPR012914 Purine catabolism PurC-like domain Amir_2103 6c59149967b7ac432fca2ca7673ff768 536 Pfam PF13556 PucR C-terminal helix-turn-helix domain 473 530 5.8E-13 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Amir_3853 c985e8be33ce87e630d80b2b433d2724 112 Pfam PF13466 STAS domain 18 97 1.2E-18 T 14-10-2018 IPR002645 STAS domain Amir_3853 c985e8be33ce87e630d80b2b433d2724 112 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 4 102 2.0E-19 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Amir_3853 c985e8be33ce87e630d80b2b433d2724 112 SUPERFAMILY SSF52091 4 103 1.55E-21 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3853 c985e8be33ce87e630d80b2b433d2724 112 Gene3D G3DSA:3.30.750.24 1 111 1.8E-27 T 14-10-2018 IPR036513 STAS domain superfamily Amir_6173 3e9876250b614a080f6a9e288fe355ec 158 Pfam PF06445 GyrI-like small molecule binding domain 4 154 9.3E-17 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain Amir_6173 3e9876250b614a080f6a9e288fe355ec 158 Gene3D G3DSA:3.20.80.10 2 157 1.3E-42 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amir_6173 3e9876250b614a080f6a9e288fe355ec 158 SUPERFAMILY SSF55136 4 156 4.88E-18 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amir_6173 3e9876250b614a080f6a9e288fe355ec 158 SMART SM00871 3 157 4.1E-16 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding Amir_6639 e8662a30a9fbe73126225a17b50df9b6 238 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 2 226 2.0E-101 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Amir_6639 e8662a30a9fbe73126225a17b50df9b6 238 PIRSF PIRSF002155 1 226 1.1E-74 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6639 e8662a30a9fbe73126225a17b50df9b6 238 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 138 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6639 e8662a30a9fbe73126225a17b50df9b6 238 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 5.2E-52 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Amir_6639 e8662a30a9fbe73126225a17b50df9b6 238 SUPERFAMILY SSF56808 5 226 1.06E-82 T 14-10-2018 IPR023674 Ribosomal protein L1-like Amir_6639 e8662a30a9fbe73126225a17b50df9b6 238 Gene3D G3DSA:3.30.190.20 20 224 2.0E-81 T 14-10-2018 Amir_6639 e8662a30a9fbe73126225a17b50df9b6 238 Gene3D G3DSA:3.40.50.790 67 158 2.0E-81 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Amir_6639 e8662a30a9fbe73126225a17b50df9b6 238 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 228 42.356 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Amir_5298 277cb4bc01018fee334f2209ad3954e0 309 Gene3D G3DSA:1.10.10.60 189 296 1.2E-23 T 14-10-2018 Amir_5298 277cb4bc01018fee334f2209ad3954e0 309 Pfam PF12852 Cupin 2 178 3.2E-33 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain Amir_5298 277cb4bc01018fee334f2209ad3954e0 309 SUPERFAMILY SSF46689 192 243 2.69E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5298 277cb4bc01018fee334f2209ad3954e0 309 SUPERFAMILY SSF46689 246 293 2.33E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5298 277cb4bc01018fee334f2209ad3954e0 309 SMART SM00342 210 292 3.6E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_5298 277cb4bc01018fee334f2209ad3954e0 309 Pfam PF12833 Helix-turn-helix domain 216 292 1.9E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_5298 277cb4bc01018fee334f2209ad3954e0 309 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 247 288 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amir_6009 0827f48e66e48801e8cbb4563029e284 496 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 326 1.7E-80 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Amir_6009 0827f48e66e48801e8cbb4563029e284 496 Gene3D G3DSA:1.10.10.350 397 496 5.2E-27 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Amir_6009 0827f48e66e48801e8cbb4563029e284 496 PRINTS PR00987 Glutamyl-tRNA synthetase signature 27 38 1.9E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Amir_6009 0827f48e66e48801e8cbb4563029e284 496 PRINTS PR00987 Glutamyl-tRNA synthetase signature 42 55 1.9E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Amir_6009 0827f48e66e48801e8cbb4563029e284 496 PRINTS PR00987 Glutamyl-tRNA synthetase signature 213 221 1.9E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Amir_6009 0827f48e66e48801e8cbb4563029e284 496 PRINTS PR00987 Glutamyl-tRNA synthetase signature 197 207 1.9E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Amir_6009 0827f48e66e48801e8cbb4563029e284 496 PRINTS PR00987 Glutamyl-tRNA synthetase signature 13 25 1.9E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Amir_6009 0827f48e66e48801e8cbb4563029e284 496 Gene3D G3DSA:3.90.800.10 79 198 7.0E-89 T 14-10-2018 Amir_6009 0827f48e66e48801e8cbb4563029e284 496 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 9 493 31.155 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Amir_6009 0827f48e66e48801e8cbb4563029e284 496 Gene3D G3DSA:3.40.50.620 10 251 7.0E-89 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_6009 0827f48e66e48801e8cbb4563029e284 496 Gene3D G3DSA:1.10.1160.10 255 338 8.3E-30 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 Amir_6009 0827f48e66e48801e8cbb4563029e284 496 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 9 491 1.3E-127 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Amir_6009 0827f48e66e48801e8cbb4563029e284 496 SUPERFAMILY SSF48163 323 493 1.83E-36 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Amir_6009 0827f48e66e48801e8cbb4563029e284 496 SUPERFAMILY SSF52374 10 322 2.95E-100 T 14-10-2018 Amir_5447 4b89364398fa2821daeea75b52e50030 173 ProSitePatterns PS00018 EF-hand calcium-binding domain. 137 149 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site Amir_5447 4b89364398fa2821daeea75b52e50030 173 SUPERFAMILY SSF47473 3 164 2.26E-24 T 14-10-2018 IPR011992 EF-hand domain pair Amir_5447 4b89364398fa2821daeea75b52e50030 173 SMART SM00054 9 37 11.0 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Amir_5447 4b89364398fa2821daeea75b52e50030 173 SMART SM00054 94 122 0.64 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Amir_5447 4b89364398fa2821daeea75b52e50030 173 SMART SM00054 128 156 0.1 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Amir_5447 4b89364398fa2821daeea75b52e50030 173 Gene3D G3DSA:1.10.238.10 1 173 2.8E-37 T 14-10-2018 Amir_5447 4b89364398fa2821daeea75b52e50030 173 ProSitePatterns PS00018 EF-hand calcium-binding domain. 18 30 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site Amir_5447 4b89364398fa2821daeea75b52e50030 173 Pfam PF13202 EF hand 12 31 8.3E-4 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Amir_5447 4b89364398fa2821daeea75b52e50030 173 Pfam PF13202 EF hand 97 118 2.6E-4 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Amir_5447 4b89364398fa2821daeea75b52e50030 173 Pfam PF13202 EF hand 131 151 6.3E-4 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Amir_5447 4b89364398fa2821daeea75b52e50030 173 ProSitePatterns PS00018 EF-hand calcium-binding domain. 103 115 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site Amir_6153 7853d688ecdc652fcb5c2bb2062f3d4d 709 SMART SM00382 453 638 1.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6153 7853d688ecdc652fcb5c2bb2062f3d4d 709 Pfam PF07498 Rho termination factor, N-terminal domain 43 79 4.7E-10 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Amir_6153 7853d688ecdc652fcb5c2bb2062f3d4d 709 Pfam PF07497 Rho termination factor, RNA-binding domain 336 411 1.7E-28 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Amir_6153 7853d688ecdc652fcb5c2bb2062f3d4d 709 TIGRFAM TIGR00767 rho: transcription termination factor Rho 42 700 1.8E-195 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Amir_6153 7853d688ecdc652fcb5c2bb2062f3d4d 709 Hamap MF_01884 Transcription termination factor Rho [rho]. 329 702 196.211 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Amir_6153 7853d688ecdc652fcb5c2bb2062f3d4d 709 Gene3D G3DSA:3.40.50.300 417 700 2.9E-119 T 14-10-2018 Amir_6153 7853d688ecdc652fcb5c2bb2062f3d4d 709 SUPERFAMILY SSF52540 373 654 2.12E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6153 7853d688ecdc652fcb5c2bb2062f3d4d 709 SUPERFAMILY SSF68912 42 80 9.02E-5 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Amir_6153 7853d688ecdc652fcb5c2bb2062f3d4d 709 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 442 646 4.0E-20 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amir_6153 7853d688ecdc652fcb5c2bb2062f3d4d 709 SMART SM00959 42 84 6.7E-11 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Amir_6153 7853d688ecdc652fcb5c2bb2062f3d4d 709 Gene3D G3DSA:2.40.50.140 263 415 3.1E-30 T 14-10-2018 Amir_6153 7853d688ecdc652fcb5c2bb2062f3d4d 709 SMART SM00357 337 404 8.5E-6 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Amir_6153 7853d688ecdc652fcb5c2bb2062f3d4d 709 SUPERFAMILY SSF50249 336 411 8.39E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_2127 8a9a05ebf923bb443eb7214a700ba14d 287 Gene3D G3DSA:1.10.260.40 2 68 1.0E-7 T 14-10-2018 Amir_2127 8a9a05ebf923bb443eb7214a700ba14d 287 SMART SM00530 14 69 1.7E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_2127 8a9a05ebf923bb443eb7214a700ba14d 287 Pfam PF13560 Helix-turn-helix domain 10 72 1.2E-16 T 14-10-2018 Amir_2127 8a9a05ebf923bb443eb7214a700ba14d 287 SUPERFAMILY SSF47413 9 64 2.82E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3593 5e547764fe1fd3d937ecf4fe2b13159b 180 SUPERFAMILY SSF52540 4 179 2.13E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3593 5e547764fe1fd3d937ecf4fe2b13159b 180 Gene3D G3DSA:3.40.50.300 2 117 3.5E-9 T 14-10-2018 Amir_2197 23e4ac6724bcdf9ec5ffc315e3a089a4 522 SMART SM00283 266 520 3.5E-55 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_2197 23e4ac6724bcdf9ec5ffc315e3a089a4 522 Pfam PF05227 CHASE3 domain 46 162 2.5E-7 T 14-10-2018 IPR007891 CHASE3 Amir_2197 23e4ac6724bcdf9ec5ffc315e3a089a4 522 Pfam PF00672 HAMP domain 206 252 2.7E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_2197 23e4ac6724bcdf9ec5ffc315e3a089a4 522 Gene3D G3DSA:1.10.287.950 206 521 6.1E-66 T 14-10-2018 Amir_2197 23e4ac6724bcdf9ec5ffc315e3a089a4 522 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 489 2.0E-31 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_2197 23e4ac6724bcdf9ec5ffc315e3a089a4 522 SUPERFAMILY SSF58104 226 519 1.44E-63 T 14-10-2018 Amir_2197 23e4ac6724bcdf9ec5ffc315e3a089a4 522 Gene3D G3DSA:1.20.1440.210 49 170 4.0E-6 T 14-10-2018 Amir_2197 23e4ac6724bcdf9ec5ffc315e3a089a4 522 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 183 203 1.6E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_2197 23e4ac6724bcdf9ec5ffc315e3a089a4 522 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 1.6E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_2197 23e4ac6724bcdf9ec5ffc315e3a089a4 522 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 391 1.6E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_2197 23e4ac6724bcdf9ec5ffc315e3a089a4 522 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 422 1.6E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_2197 23e4ac6724bcdf9ec5ffc315e3a089a4 522 SMART SM00304 206 258 3.0E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_2197 23e4ac6724bcdf9ec5ffc315e3a089a4 522 SMART SM00304 321 377 100.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_6202 aeaf0626e9bdcd8d93bb8f7741e889e4 277 SMART SM00418 8 87 5.0E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_6202 aeaf0626e9bdcd8d93bb8f7741e889e4 277 Pfam PF12840 Helix-turn-helix domain 9 67 3.7E-10 T 14-10-2018 Amir_6202 aeaf0626e9bdcd8d93bb8f7741e889e4 277 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 2.1E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_6202 aeaf0626e9bdcd8d93bb8f7741e889e4 277 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 2.1E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_6202 aeaf0626e9bdcd8d93bb8f7741e889e4 277 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 2.1E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_6202 aeaf0626e9bdcd8d93bb8f7741e889e4 277 Gene3D G3DSA:1.10.10.10 1 93 1.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6202 aeaf0626e9bdcd8d93bb8f7741e889e4 277 SUPERFAMILY SSF46785 3 88 3.92E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5511 5ad8022839bd7dedcc58734d5feb4274 227 SUPERFAMILY SSF51206 3 130 3.93E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Amir_5511 5ad8022839bd7dedcc58734d5feb4274 227 SMART SM00100 1 118 2.4E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_5511 5ad8022839bd7dedcc58734d5feb4274 227 Pfam PF00027 Cyclic nucleotide-binding domain 19 104 3.8E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_5511 5ad8022839bd7dedcc58734d5feb4274 227 Gene3D G3DSA:2.60.120.10 1 133 7.9E-24 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_5511 5ad8022839bd7dedcc58734d5feb4274 227 SUPERFAMILY SSF46785 138 213 2.89E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5511 5ad8022839bd7dedcc58734d5feb4274 227 Pfam PF13545 Crp-like helix-turn-helix domain 138 211 1.7E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amir_5511 5ad8022839bd7dedcc58734d5feb4274 227 Gene3D G3DSA:1.10.10.10 137 218 5.9E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4393 dced17a6c202de0cf41d87d79ca3f6a2 246 Pfam PF12833 Helix-turn-helix domain 165 245 1.9E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4393 dced17a6c202de0cf41d87d79ca3f6a2 246 SMART SM00342 158 243 5.8E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4393 dced17a6c202de0cf41d87d79ca3f6a2 246 Gene3D G3DSA:1.10.10.60 148 246 1.1E-22 T 14-10-2018 Amir_4393 dced17a6c202de0cf41d87d79ca3f6a2 246 SUPERFAMILY SSF46689 196 245 2.69E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4154 e58d8dc9a5d22575c101bffc23431dac 643 Pfam PF05099 Tellurite resistance protein TerB 481 599 7.6E-16 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal Amir_4154 e58d8dc9a5d22575c101bffc23431dac 643 Pfam PF13208 TerB N-terminal domain 73 278 4.8E-56 T 14-10-2018 IPR025266 TerB, N-terminal Amir_4154 e58d8dc9a5d22575c101bffc23431dac 643 Gene3D G3DSA:1.10.3680.10 475 601 1.8E-15 T 14-10-2018 IPR029024 TerB-like Amir_4154 e58d8dc9a5d22575c101bffc23431dac 643 SUPERFAMILY SSF158682 481 601 4.05E-23 T 14-10-2018 IPR029024 TerB-like Amir_1571 3753888b1b42162b7053476ea5589c1e 330 Gene3D G3DSA:3.90.920.30 21 296 2.4E-89 T 14-10-2018 Amir_1571 3753888b1b42162b7053476ea5589c1e 330 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 14 258 1.2E-67 T 14-10-2018 IPR014145 DNA ligase D, polymerase domain Amir_4608 d5f31c0612d822133b738ca54ecf125d 344 SUPERFAMILY SSF47413 7 62 1.86E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_4608 d5f31c0612d822133b738ca54ecf125d 344 SUPERFAMILY SSF53822 82 324 3.4E-37 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_4608 d5f31c0612d822133b738ca54ecf125d 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 4.2E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_4608 d5f31c0612d822133b738ca54ecf125d 344 Gene3D G3DSA:1.10.260.40 1 64 3.1E-20 T 14-10-2018 Amir_4608 d5f31c0612d822133b738ca54ecf125d 344 Gene3D G3DSA:3.40.50.2300 82 314 1.3E-41 T 14-10-2018 Amir_4608 d5f31c0612d822133b738ca54ecf125d 344 Gene3D G3DSA:3.40.50.2300 171 294 1.3E-41 T 14-10-2018 Amir_4608 d5f31c0612d822133b738ca54ecf125d 344 SMART SM00354 8 78 3.1E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_4608 d5f31c0612d822133b738ca54ecf125d 344 Pfam PF13377 Periplasmic binding protein-like domain 179 333 4.0E-24 T 14-10-2018 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 SUPERFAMILY SSF48452 94 263 9.49E-41 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 SUPERFAMILY SSF48452 955 1067 7.59E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 Gene3D G3DSA:3.40.50.300 263 425 8.5E-30 T 14-10-2018 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 SUPERFAMILY SSF52540 270 534 2.63E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 Gene3D G3DSA:1.10.10.10 1 95 2.0E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 Pfam PF00486 Transcriptional regulatory protein, C terminal 28 87 4.3E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 Pfam PF00931 NB-ARC domain 285 540 1.4E-13 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 SUPERFAMILY SSF48452 714 869 3.51E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 Pfam PF03704 Bacterial transcriptional activator domain 99 244 3.0E-42 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 SMART SM00862 19 92 1.0E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 Gene3D G3DSA:1.25.40.10 875 1087 3.9E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 SUPERFAMILY SSF46894 6 91 4.54E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 SMART SM00028 999 1032 150.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 SMART SM00028 194 227 140.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 SMART SM00028 759 792 0.047 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 SMART SM00028 718 751 61.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 SMART SM00028 799 832 69.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 SMART SM00028 879 912 36.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 Pfam PF13424 Tetratricopeptide repeat 718 788 1.8E-7 T 14-10-2018 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 SUPERFAMILY SSF48452 839 987 1.2E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 PRINTS PR00364 Disease resistance protein signature 376 390 2.2E-9 T 14-10-2018 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 PRINTS PR00364 Disease resistance protein signature 464 478 2.2E-9 T 14-10-2018 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 PRINTS PR00364 Disease resistance protein signature 298 313 2.2E-9 T 14-10-2018 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 Gene3D G3DSA:1.25.40.10 695 874 1.4E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 SMART SM01043 99 244 1.4E-46 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_0205 345d26bd7f3e1c277809617d41d6f265 1088 Gene3D G3DSA:1.25.40.10 97 262 4.8E-48 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6454 9cd56894a70ca703f0eb440efdd461b4 382 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 78 349 2.0E-53 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 Amir_6454 9cd56894a70ca703f0eb440efdd461b4 382 SUPERFAMILY SSF53822 87 295 6.94E-6 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_6454 9cd56894a70ca703f0eb440efdd461b4 382 Gene3D G3DSA:3.40.50.2300 74 341 1.8E-92 T 14-10-2018 Amir_6454 9cd56894a70ca703f0eb440efdd461b4 382 Gene3D G3DSA:3.40.50.2300 178 374 1.8E-92 T 14-10-2018 Amir_1907 2bce850f86b30e65c0f50b5b8f3aab19 566 Gene3D G3DSA:3.30.565.10 442 565 1.5E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1907 2bce850f86b30e65c0f50b5b8f3aab19 566 SMART SM00065 55 202 4.2E-18 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_1907 2bce850f86b30e65c0f50b5b8f3aab19 566 SMART SM00065 223 368 4.8E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_1907 2bce850f86b30e65c0f50b5b8f3aab19 566 SUPERFAMILY SSF55781 205 386 1.31E-13 T 14-10-2018 Amir_1907 2bce850f86b30e65c0f50b5b8f3aab19 566 Pfam PF07730 Histidine kinase 376 438 2.1E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_1907 2bce850f86b30e65c0f50b5b8f3aab19 566 SUPERFAMILY SSF55874 477 565 1.57E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1907 2bce850f86b30e65c0f50b5b8f3aab19 566 SMART SM00387 478 566 2.7E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_1907 2bce850f86b30e65c0f50b5b8f3aab19 566 Gene3D G3DSA:3.30.450.40 224 375 1.2E-21 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_1907 2bce850f86b30e65c0f50b5b8f3aab19 566 SUPERFAMILY SSF55781 37 218 1.79E-37 T 14-10-2018 Amir_1907 2bce850f86b30e65c0f50b5b8f3aab19 566 Pfam PF13185 GAF domain 55 193 1.6E-17 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_1907 2bce850f86b30e65c0f50b5b8f3aab19 566 Gene3D G3DSA:3.30.450.40 52 202 9.9E-55 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_1907 2bce850f86b30e65c0f50b5b8f3aab19 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 484 530 1.3E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_1907 2bce850f86b30e65c0f50b5b8f3aab19 566 Pfam PF13492 GAF domain 231 359 1.3E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_1981 e574950722d621dbd427a285160bc8be 332 SUPERFAMILY SSF161098 91 316 3.53E-50 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1981 e574950722d621dbd427a285160bc8be 332 Gene3D G3DSA:1.10.3720.10 85 331 5.2E-59 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1981 e574950722d621dbd427a285160bc8be 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 325 3.3E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_1586 3c187b5ee9ca9ba4122e0b3714fef860 409 Gene3D G3DSA:3.90.1150.10 22 398 5.7E-134 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_1586 3c187b5ee9ca9ba4122e0b3714fef860 409 Gene3D G3DSA:3.40.640.10 67 317 5.7E-134 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_1586 3c187b5ee9ca9ba4122e0b3714fef860 409 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 232 269 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_1586 3c187b5ee9ca9ba4122e0b3714fef860 409 PIRSF PIRSF000521 184 409 1.5E-25 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_1586 3c187b5ee9ca9ba4122e0b3714fef860 409 PIRSF PIRSF000521 3 173 3.9E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_1586 3c187b5ee9ca9ba4122e0b3714fef860 409 SUPERFAMILY SSF53383 13 408 3.26E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_1586 3c187b5ee9ca9ba4122e0b3714fef860 409 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 15 407 4.0E-140 T 14-10-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Amir_1586 3c187b5ee9ca9ba4122e0b3714fef860 409 Pfam PF00202 Aminotransferase class-III 26 407 2.1E-110 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_6334 ae1b451980cf2e15978cbc2c5e7a7723 461 Pfam PF00881 Nitroreductase family 277 443 3.9E-26 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amir_6334 ae1b451980cf2e15978cbc2c5e7a7723 461 Pfam PF01996 F420-0:Gamma-glutamyl ligase 105 236 1.8E-32 T 14-10-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 Amir_6334 ae1b451980cf2e15978cbc2c5e7a7723 461 Pfam PF01996 F420-0:Gamma-glutamyl ligase 37 83 8.6E-7 T 14-10-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 Amir_6334 ae1b451980cf2e15978cbc2c5e7a7723 461 Gene3D G3DSA:3.90.1660.10 77 259 1.8E-65 T 14-10-2018 Amir_6334 ae1b451980cf2e15978cbc2c5e7a7723 461 SUPERFAMILY SSF55469 272 452 1.7E-35 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_6334 ae1b451980cf2e15978cbc2c5e7a7723 461 TIGRFAM TIGR01916 F420_cofE: coenzyme F420-0:L-glutamate ligase 30 259 1.5E-77 T 14-10-2018 IPR008225 Coenzyme F420:L-glutamate ligase GO:0043773|GO:0046872|GO:0051188 KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 Amir_6334 ae1b451980cf2e15978cbc2c5e7a7723 461 TIGRFAM TIGR03553 F420_FbiB_CTERM: F420 biosynthesis protein FbiB, C-terminal domain 272 455 8.5E-90 T 14-10-2018 IPR019943 Coenzyme F420 biosynthesis protein FbiB, C-terminal GO:0016881 KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 Amir_6334 ae1b451980cf2e15978cbc2c5e7a7723 461 Gene3D G3DSA:3.40.109.10 260 456 9.7E-50 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_6334 ae1b451980cf2e15978cbc2c5e7a7723 461 Hamap MF_01259 Coenzyme F420:L-glutamate ligase [fbiB]. 34 461 50.303 T 14-10-2018 IPR023661 Coenzyme F420:L-glutamate ligase, Actinobacteria GO:0043773|GO:0046872|GO:0051188 KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 Amir_6334 ae1b451980cf2e15978cbc2c5e7a7723 461 Gene3D G3DSA:3.30.1330.100 33 245 1.8E-65 T 14-10-2018 Amir_6334 ae1b451980cf2e15978cbc2c5e7a7723 461 SUPERFAMILY SSF144010 30 264 1.57E-65 T 14-10-2018 Amir_1144 8549d61779256c22f6ba3a18f8c95315 258 Gene3D G3DSA:3.90.1560.10 19 246 1.9E-22 T 14-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 Amir_1144 8549d61779256c22f6ba3a18f8c95315 258 SUPERFAMILY SSF142823 8 242 1.44E-29 T 14-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 Amir_1144 8549d61779256c22f6ba3a18f8c95315 258 Pfam PF04029 2-phosphosulpholactate phosphatase 79 238 7.5E-12 T 14-10-2018 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 Amir_0902 06151fadc85eab70ef1c5d4fda1af36e 292 Gene3D G3DSA:1.10.260.40 5 76 1.1E-8 T 14-10-2018 Amir_0902 06151fadc85eab70ef1c5d4fda1af36e 292 Pfam PF13560 Helix-turn-helix domain 13 74 1.0E-8 T 14-10-2018 Amir_0902 06151fadc85eab70ef1c5d4fda1af36e 292 SMART SM00530 16 71 3.8E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_0902 06151fadc85eab70ef1c5d4fda1af36e 292 SUPERFAMILY SSF47413 11 67 1.49E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2637 d4aafc17fa520327bb68a9168394477b 897 SUPERFAMILY SSF47741 84 148 5.76E-24 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Amir_2637 d4aafc17fa520327bb68a9168394477b 897 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 170 282 4.5E-30 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Amir_2637 d4aafc17fa520327bb68a9168394477b 897 Gene3D G3DSA:3.30.365.10 516 885 1.8E-97 T 14-10-2018 Amir_2637 d4aafc17fa520327bb68a9168394477b 897 Gene3D G3DSA:3.30.365.10 169 429 2.5E-121 T 14-10-2018 Amir_2637 d4aafc17fa520327bb68a9168394477b 897 Gene3D G3DSA:3.30.365.10 3 152 3.8E-51 T 14-10-2018 Amir_2637 d4aafc17fa520327bb68a9168394477b 897 SMART SM01008 170 282 6.7E-46 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Amir_2637 d4aafc17fa520327bb68a9168394477b 897 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Amir_2637 d4aafc17fa520327bb68a9168394477b 897 SUPERFAMILY SSF54292 4 77 2.23E-18 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amir_2637 d4aafc17fa520327bb68a9168394477b 897 SUPERFAMILY SSF54665 154 301 1.7E-39 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Amir_2637 d4aafc17fa520327bb68a9168394477b 897 Gene3D G3DSA:3.30.365.10 283 505 2.5E-121 T 14-10-2018 Amir_2637 d4aafc17fa520327bb68a9168394477b 897 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 301 830 4.1E-153 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Amir_2637 d4aafc17fa520327bb68a9168394477b 897 Pfam PF01799 [2Fe-2S] binding domain 72 141 3.6E-25 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Amir_2637 d4aafc17fa520327bb68a9168394477b 897 Gene3D G3DSA:3.90.1170.50 185 282 2.5E-121 T 14-10-2018 Amir_2637 d4aafc17fa520327bb68a9168394477b 897 Gene3D G3DSA:3.30.365.10 596 745 1.8E-97 T 14-10-2018 Amir_2637 d4aafc17fa520327bb68a9168394477b 897 SUPERFAMILY SSF56003 285 892 8.9E-176 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Amir_5056 3b825cf098947d14228430ecd79387b9 320 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Amir_5056 3b825cf098947d14228430ecd79387b9 320 PRINTS PR00990 Ribokinase signature 30 49 9.2E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_5056 3b825cf098947d14228430ecd79387b9 320 PRINTS PR00990 Ribokinase signature 184 199 9.2E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_5056 3b825cf098947d14228430ecd79387b9 320 PRINTS PR00990 Ribokinase signature 225 236 9.2E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_5056 3b825cf098947d14228430ecd79387b9 320 SUPERFAMILY SSF53613 4 307 3.12E-81 T 14-10-2018 IPR029056 Ribokinase-like Amir_5056 3b825cf098947d14228430ecd79387b9 320 Gene3D G3DSA:3.40.1190.20 5 312 2.7E-89 T 14-10-2018 IPR029056 Ribokinase-like Amir_5056 3b825cf098947d14228430ecd79387b9 320 Pfam PF00294 pfkB family carbohydrate kinase 6 302 2.9E-57 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Amir_5374 786e60559d718362399b1d21b048d65f 218 Pfam PF07730 Histidine kinase 16 80 1.9E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_5374 786e60559d718362399b1d21b048d65f 218 SUPERFAMILY SSF55874 88 215 6.02E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5374 786e60559d718362399b1d21b048d65f 218 SMART SM00387 121 218 4.3E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5374 786e60559d718362399b1d21b048d65f 218 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 123 216 8.9E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5374 786e60559d718362399b1d21b048d65f 218 PRINTS PR00344 Bacterial sensor protein C-terminal signature 178 196 3.2E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5374 786e60559d718362399b1d21b048d65f 218 PRINTS PR00344 Bacterial sensor protein C-terminal signature 156 170 3.2E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5374 786e60559d718362399b1d21b048d65f 218 PRINTS PR00344 Bacterial sensor protein C-terminal signature 202 215 3.2E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5374 786e60559d718362399b1d21b048d65f 218 Gene3D G3DSA:3.30.565.10 85 216 8.0E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4852 e8074692ee898e1cb9122d1602dfd701 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 231 2.3E-58 T 14-10-2018 Amir_4852 e8074692ee898e1cb9122d1602dfd701 234 SUPERFAMILY SSF51735 4 232 3.17E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4852 e8074692ee898e1cb9122d1602dfd701 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 159 4.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4852 e8074692ee898e1cb9122d1602dfd701 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 120 128 4.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4852 e8074692ee898e1cb9122d1602dfd701 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 67 78 4.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4852 e8074692ee898e1cb9122d1602dfd701 234 Gene3D G3DSA:3.40.50.720 2 233 9.2E-80 T 14-10-2018 Amir_4852 e8074692ee898e1cb9122d1602dfd701 234 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 127 155 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_4852 e8074692ee898e1cb9122d1602dfd701 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 2.2E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4852 e8074692ee898e1cb9122d1602dfd701 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.2E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4852 e8074692ee898e1cb9122d1602dfd701 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 2.2E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4852 e8074692ee898e1cb9122d1602dfd701 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 2.2E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4852 e8074692ee898e1cb9122d1602dfd701 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 2.2E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4852 e8074692ee898e1cb9122d1602dfd701 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 214 2.2E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4852 e8074692ee898e1cb9122d1602dfd701 234 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 175 2.6E-7 T 14-10-2018 Amir_2185 8040a72ad6002dbb819a8a7ff3847a45 237 SUPERFAMILY SSF51735 1 229 2.84E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2185 8040a72ad6002dbb819a8a7ff3847a45 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.0E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2185 8040a72ad6002dbb819a8a7ff3847a45 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.0E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2185 8040a72ad6002dbb819a8a7ff3847a45 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.0E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2185 8040a72ad6002dbb819a8a7ff3847a45 237 Pfam PF00106 short chain dehydrogenase 6 193 3.0E-55 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2185 8040a72ad6002dbb819a8a7ff3847a45 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2185 8040a72ad6002dbb819a8a7ff3847a45 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2185 8040a72ad6002dbb819a8a7ff3847a45 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2185 8040a72ad6002dbb819a8a7ff3847a45 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2185 8040a72ad6002dbb819a8a7ff3847a45 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2185 8040a72ad6002dbb819a8a7ff3847a45 237 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 0.0032 T 14-10-2018 Amir_2185 8040a72ad6002dbb819a8a7ff3847a45 237 Gene3D G3DSA:3.40.50.720 1 237 1.7E-67 T 14-10-2018 Amir_2185 8040a72ad6002dbb819a8a7ff3847a45 237 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_1918 ec431da08cf64df769f4b716665c1fe1 789 Gene3D G3DSA:3.40.50.920 605 789 3.6E-81 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_1918 ec431da08cf64df769f4b716665c1fe1 789 ProSitePatterns PS60002 Phosphoketolase signature 1. 143 149 - T 14-10-2018 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 Amir_1918 ec431da08cf64df769f4b716665c1fe1 789 ProSitePatterns PS60003 Phosphoketolase signature 2. 156 174 - T 14-10-2018 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 Amir_1918 ec431da08cf64df769f4b716665c1fe1 789 Gene3D G3DSA:3.40.50.970 1 384 9.5E-176 T 14-10-2018 Amir_1918 ec431da08cf64df769f4b716665c1fe1 789 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 398 574 8.5E-87 T 14-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 Amir_1918 ec431da08cf64df769f4b716665c1fe1 789 PIRSF PIRSF017245 2 789 0.0 T 14-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 Amir_1918 ec431da08cf64df769f4b716665c1fe1 789 SUPERFAMILY SSF52518 375 590 1.41E-23 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_1918 ec431da08cf64df769f4b716665c1fe1 789 SUPERFAMILY SSF52518 11 368 2.95E-73 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_1918 ec431da08cf64df769f4b716665c1fe1 789 Pfam PF09364 XFP N-terminal domain 10 383 4.2E-185 T 14-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal Amir_1918 ec431da08cf64df769f4b716665c1fe1 789 Gene3D G3DSA:3.40.50.970 385 604 7.6E-100 T 14-10-2018 Amir_1918 ec431da08cf64df769f4b716665c1fe1 789 Pfam PF09363 XFP C-terminal domain 585 787 4.7E-92 T 14-10-2018 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 Amir_1918 ec431da08cf64df769f4b716665c1fe1 789 Hamap MF_01403 Probable phosphoketolase. 4 789 40.714 T 14-10-2018 IPR023962 Probable phosphoketolase Amir_0522 f6024a5862490d456104d71d85ec2549 472 Gene3D G3DSA:1.20.1740.10 25 466 3.7E-82 T 14-10-2018 Amir_0522 f6024a5862490d456104d71d85ec2549 472 PIRSF PIRSF006060 3 464 3.4E-77 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amir_0522 f6024a5862490d456104d71d85ec2549 472 Pfam PF13520 Amino acid permease 34 427 1.9E-42 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amir_6180 a6db69926a5d58b6495a4db8c89f0851 812 SUPERFAMILY SSF51445 287 632 3.31E-101 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_6180 a6db69926a5d58b6495a4db8c89f0851 812 Gene3D G3DSA:2.60.40.10 190 288 8.5E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_6180 a6db69926a5d58b6495a4db8c89f0851 812 Gene3D G3DSA:2.60.120.260 3 189 1.2E-58 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_6180 a6db69926a5d58b6495a4db8c89f0851 812 Gene3D G3DSA:3.20.20.80 289 630 3.9E-113 T 14-10-2018 Amir_6180 a6db69926a5d58b6495a4db8c89f0851 812 SUPERFAMILY SSF49303 192 290 1.64E-13 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Amir_6180 a6db69926a5d58b6495a4db8c89f0851 812 SUPERFAMILY SSF49785 4 189 1.84E-49 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_6180 a6db69926a5d58b6495a4db8c89f0851 812 SUPERFAMILY SSF49303 727 791 2.16E-5 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Amir_4862 eb838f9f5dce59033151fe1249d1acd2 599 Gene3D G3DSA:3.40.50.300 325 574 1.7E-78 T 14-10-2018 Amir_4862 eb838f9f5dce59033151fe1249d1acd2 599 Gene3D G3DSA:1.20.1560.10 1 313 8.2E-62 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_4862 eb838f9f5dce59033151fe1249d1acd2 599 SUPERFAMILY SSF52540 329 564 2.51E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4862 eb838f9f5dce59033151fe1249d1acd2 599 Pfam PF00005 ABC transporter 350 496 1.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4862 eb838f9f5dce59033151fe1249d1acd2 599 Pfam PF00664 ABC transporter transmembrane region 14 275 1.8E-31 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_4862 eb838f9f5dce59033151fe1249d1acd2 599 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_4862 eb838f9f5dce59033151fe1249d1acd2 599 SUPERFAMILY SSF90123 2 311 1.31E-59 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_4862 eb838f9f5dce59033151fe1249d1acd2 599 SMART SM00382 358 542 1.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4929 e915ac7ce7ba74c9c19aa0ec7fc7f246 395 Pfam PF07690 Major Facilitator Superfamily 23 355 5.7E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_4929 e915ac7ce7ba74c9c19aa0ec7fc7f246 395 SUPERFAMILY SSF103473 19 392 5.36E-38 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4929 e915ac7ce7ba74c9c19aa0ec7fc7f246 395 Gene3D G3DSA:1.20.1250.20 15 390 6.3E-35 T 14-10-2018 Amir_6330 21cc5d677d7a0ad05a571c8b7bd2d676 1299 SUPERFAMILY SSF53448 13 295 1.76E-26 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_6330 21cc5d677d7a0ad05a571c8b7bd2d676 1299 Pfam PF13641 Glycosyltransferase like family 2 134 295 4.2E-10 T 14-10-2018 Amir_6330 21cc5d677d7a0ad05a571c8b7bd2d676 1299 Gene3D G3DSA:3.90.550.10 129 299 6.0E-17 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_1788 abc9d5f524e2faa58c90de6ec8b5a850 472 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site Amir_1788 abc9d5f524e2faa58c90de6ec8b5a850 472 Gene3D G3DSA:3.20.20.80 1 463 1.5E-185 T 14-10-2018 Amir_1788 abc9d5f524e2faa58c90de6ec8b5a850 472 TIGRFAM TIGR03356 BGL: beta-galactosidase 6 454 3.2E-185 T 14-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 Amir_1788 abc9d5f524e2faa58c90de6ec8b5a850 472 SUPERFAMILY SSF51445 5 465 3.79E-168 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1788 abc9d5f524e2faa58c90de6ec8b5a850 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 432 444 3.4E-22 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_1788 abc9d5f524e2faa58c90de6ec8b5a850 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 366 374 3.4E-22 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_1788 abc9d5f524e2faa58c90de6ec8b5a850 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 408 425 3.4E-22 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_1788 abc9d5f524e2faa58c90de6ec8b5a850 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 287 301 3.4E-22 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_1788 abc9d5f524e2faa58c90de6ec8b5a850 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 387 398 3.4E-22 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_1788 abc9d5f524e2faa58c90de6ec8b5a850 472 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 366 374 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site Amir_1788 abc9d5f524e2faa58c90de6ec8b5a850 472 Pfam PF00232 Glycosyl hydrolase family 1 5 461 2.2E-168 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_5454 323e7a1a4dd5af453135185ff4b1922c 300 TIGRFAM TIGR00761 argB: acetylglutamate kinase 30 268 5.4E-74 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amir_5454 323e7a1a4dd5af453135185ff4b1922c 300 Pfam PF00696 Amino acid kinase family 30 270 5.5E-41 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Amir_5454 323e7a1a4dd5af453135185ff4b1922c 300 Hamap MF_00082 Acetylglutamate kinase [argB]. 28 286 45.996 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amir_5454 323e7a1a4dd5af453135185ff4b1922c 300 SUPERFAMILY SSF53633 8 294 1.7E-84 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amir_5454 323e7a1a4dd5af453135185ff4b1922c 300 PIRSF PIRSF000728 14 293 1.8E-99 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amir_5454 323e7a1a4dd5af453135185ff4b1922c 300 Gene3D G3DSA:3.40.1160.10 7 299 2.2E-99 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amir_5454 323e7a1a4dd5af453135185ff4b1922c 300 PRINTS PR00474 Glutamate 5-kinase family signature 243 263 8.7E-8 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amir_5454 323e7a1a4dd5af453135185ff4b1922c 300 PRINTS PR00474 Glutamate 5-kinase family signature 192 219 8.7E-8 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amir_5454 323e7a1a4dd5af453135185ff4b1922c 300 PRINTS PR00474 Glutamate 5-kinase family signature 60 74 8.7E-8 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amir_1435 86ea78c430336fe57eea8800e6153750 362 SUPERFAMILY SSF63829 40 265 1.44E-8 T 14-10-2018 Amir_3275 1b29a9cdded3610d43aadd5f72c0bc82 271 SUPERFAMILY SSF53335 14 239 1.4E-51 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3275 1b29a9cdded3610d43aadd5f72c0bc82 271 SMART SM00828 Methyltransferase in polyketide synthase (PKS) enzymes. 52 243 0.0032 T 14-10-2018 IPR020803 Polyketide synthase, methyltransferase domain Amir_3275 1b29a9cdded3610d43aadd5f72c0bc82 271 Pfam PF08241 Methyltransferase domain 76 174 6.7E-25 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_3275 1b29a9cdded3610d43aadd5f72c0bc82 271 Gene3D G3DSA:3.40.50.150 4 271 5.1E-59 T 14-10-2018 Amir_5294 702a2f75824d260a7ab8f297e2dfbedb 190 Pfam PF00293 NUDIX domain 29 160 2.0E-20 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_5294 702a2f75824d260a7ab8f297e2dfbedb 190 SUPERFAMILY SSF55811 2 169 5.96E-47 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_5294 702a2f75824d260a7ab8f297e2dfbedb 190 PIRSF PIRSF018427 1 185 6.3E-55 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 Amir_5294 702a2f75824d260a7ab8f297e2dfbedb 190 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 2 175 34.359 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 Amir_5294 702a2f75824d260a7ab8f297e2dfbedb 190 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 4 163 1.2E-45 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 Amir_5294 702a2f75824d260a7ab8f297e2dfbedb 190 Gene3D G3DSA:3.90.79.10 1 171 4.8E-52 T 14-10-2018 Amir_1098 01aa6a45ffc401e0abce4246bf09f7a7 205 Pfam PF00574 Clp protease 22 196 4.3E-74 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Amir_1098 01aa6a45ffc401e0abce4246bf09f7a7 205 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 116 129 - T 14-10-2018 IPR033135 ClpP, histidine active site Amir_1098 01aa6a45ffc401e0abce4246bf09f7a7 205 Gene3D G3DSA:3.90.226.10 5 202 1.5E-70 T 14-10-2018 Amir_1098 01aa6a45ffc401e0abce4246bf09f7a7 205 SUPERFAMILY SSF52096 23 198 3.13E-62 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_1098 01aa6a45ffc401e0abce4246bf09f7a7 205 PRINTS PR00127 Clp protease catalytic subunit P signature 94 111 6.6E-42 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1098 01aa6a45ffc401e0abce4246bf09f7a7 205 PRINTS PR00127 Clp protease catalytic subunit P signature 63 83 6.6E-42 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1098 01aa6a45ffc401e0abce4246bf09f7a7 205 PRINTS PR00127 Clp protease catalytic subunit P signature 115 134 6.6E-42 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1098 01aa6a45ffc401e0abce4246bf09f7a7 205 PRINTS PR00127 Clp protease catalytic subunit P signature 23 38 6.6E-42 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1098 01aa6a45ffc401e0abce4246bf09f7a7 205 PRINTS PR00127 Clp protease catalytic subunit P signature 172 191 6.6E-42 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1098 01aa6a45ffc401e0abce4246bf09f7a7 205 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 8 197 38.854 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_2454 2d83bfeec31c29209cdf11037b3c0e67 168 ProSitePatterns PS01117 MarR-type HTH domain signature. 92 126 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Amir_2454 2d83bfeec31c29209cdf11037b3c0e67 168 SMART SM00347 50 153 2.6E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2454 2d83bfeec31c29209cdf11037b3c0e67 168 Gene3D G3DSA:1.10.10.10 4 168 1.2E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2454 2d83bfeec31c29209cdf11037b3c0e67 168 Pfam PF12802 MarR family 57 117 1.4E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2454 2d83bfeec31c29209cdf11037b3c0e67 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 77 93 1.4E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2454 2d83bfeec31c29209cdf11037b3c0e67 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 109 1.4E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2454 2d83bfeec31c29209cdf11037b3c0e67 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 129 1.4E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2454 2d83bfeec31c29209cdf11037b3c0e67 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 143 163 1.4E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2454 2d83bfeec31c29209cdf11037b3c0e67 168 SUPERFAMILY SSF46785 19 167 7.8E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2575 48a493d0dcd8392e2f75f22a443fbc4f 512 SUPERFAMILY SSF51011 366 507 1.8E-21 T 14-10-2018 Amir_2575 48a493d0dcd8392e2f75f22a443fbc4f 512 Gene3D G3DSA:3.20.20.80 17 385 2.4E-189 T 14-10-2018 Amir_2575 48a493d0dcd8392e2f75f22a443fbc4f 512 SUPERFAMILY SSF51445 17 383 2.3E-100 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_2575 48a493d0dcd8392e2f75f22a443fbc4f 512 SMART SM00813 290 502 2.2E-55 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 Amir_2575 48a493d0dcd8392e2f75f22a443fbc4f 512 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 290 502 9.8E-32 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 Amir_2575 48a493d0dcd8392e2f75f22a443fbc4f 512 Gene3D G3DSA:2.60.40.1180 8 506 2.4E-189 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_0970 e8bde2256e6906d6e13c4a3aecea8408 428 Gene3D G3DSA:3.40.190.10 37 373 2.0E-107 T 14-10-2018 Amir_0970 e8bde2256e6906d6e13c4a3aecea8408 428 Pfam PF01547 Bacterial extracellular solute-binding protein 48 334 1.2E-27 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_0970 e8bde2256e6906d6e13c4a3aecea8408 428 SUPERFAMILY SSF53850 23 427 3.16E-53 T 14-10-2018 Amir_0970 e8bde2256e6906d6e13c4a3aecea8408 428 Gene3D G3DSA:3.40.190.10 146 420 2.0E-107 T 14-10-2018 Amir_4494 7edfe83e13f9c4a56cb030ade4d12f8b 427 Gene3D G3DSA:1.10.630.10 5 418 3.1E-111 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4494 7edfe83e13f9c4a56cb030ade4d12f8b 427 PRINTS PR00359 B-class P450 signature 160 175 2.4E-35 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4494 7edfe83e13f9c4a56cb030ade4d12f8b 427 PRINTS PR00359 B-class P450 signature 98 109 2.4E-35 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4494 7edfe83e13f9c4a56cb030ade4d12f8b 427 PRINTS PR00359 B-class P450 signature 283 294 2.4E-35 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4494 7edfe83e13f9c4a56cb030ade4d12f8b 427 PRINTS PR00359 B-class P450 signature 358 369 2.4E-35 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4494 7edfe83e13f9c4a56cb030ade4d12f8b 427 PRINTS PR00359 B-class P450 signature 349 358 2.4E-35 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4494 7edfe83e13f9c4a56cb030ade4d12f8b 427 PRINTS PR00359 B-class P450 signature 328 343 2.4E-35 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4494 7edfe83e13f9c4a56cb030ade4d12f8b 427 PRINTS PR00359 B-class P450 signature 300 327 2.4E-35 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4494 7edfe83e13f9c4a56cb030ade4d12f8b 427 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 351 360 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_4494 7edfe83e13f9c4a56cb030ade4d12f8b 427 SUPERFAMILY SSF48264 25 409 5.89E-73 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4494 7edfe83e13f9c4a56cb030ade4d12f8b 427 Pfam PF00067 Cytochrome P450 284 377 6.3E-16 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_6603 7b7d349bce0be6a29328688cf5004055 104 Gene3D G3DSA:2.30.30.30 1 104 2.0E-35 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Amir_6603 7b7d349bce0be6a29328688cf5004055 104 SUPERFAMILY SSF50104 1 99 8.21E-31 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Amir_6603 7b7d349bce0be6a29328688cf5004055 104 Pfam PF00467 KOW motif 5 36 3.3E-8 T 14-10-2018 IPR005824 KOW Amir_6603 7b7d349bce0be6a29328688cf5004055 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6603 7b7d349bce0be6a29328688cf5004055 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 104 2.9E-25 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6603 7b7d349bce0be6a29328688cf5004055 104 SMART SM00739 2 29 3.5E-5 T 14-10-2018 IPR005824 KOW Amir_6603 7b7d349bce0be6a29328688cf5004055 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 98 21.458 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6603 7b7d349bce0be6a29328688cf5004055 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 104 4.7E-37 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5038 1b1d42b5d38c69ae956d12820067c0ff 287 SMART SM00530 15 70 7.1E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_5038 1b1d42b5d38c69ae956d12820067c0ff 287 SUPERFAMILY SSF47413 10 66 1.01E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_5038 1b1d42b5d38c69ae956d12820067c0ff 287 Pfam PF13560 Helix-turn-helix domain 12 69 8.5E-8 T 14-10-2018 Amir_5038 1b1d42b5d38c69ae956d12820067c0ff 287 Gene3D G3DSA:1.10.260.40 1 78 7.1E-7 T 14-10-2018 Amir_4306 ba27913299e56d701d7f466e7652997a 272 SMART SM00450 148 266 4.8E-14 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_4306 ba27913299e56d701d7f466e7652997a 272 SMART SM00450 3 127 1.4E-21 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_4306 ba27913299e56d701d7f466e7652997a 272 Gene3D G3DSA:3.40.250.10 1 145 9.5E-42 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_4306 ba27913299e56d701d7f466e7652997a 272 SUPERFAMILY SSF52821 2 143 2.62E-38 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_4306 ba27913299e56d701d7f466e7652997a 272 Gene3D G3DSA:3.40.250.10 153 271 2.1E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_4306 ba27913299e56d701d7f466e7652997a 272 SUPERFAMILY SSF52821 147 271 2.88E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_4306 ba27913299e56d701d7f466e7652997a 272 Pfam PF00581 Rhodanese-like domain 163 262 5.0E-11 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_4306 ba27913299e56d701d7f466e7652997a 272 Pfam PF00581 Rhodanese-like domain 6 122 1.2E-16 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_4306 ba27913299e56d701d7f466e7652997a 272 ProSitePatterns PS00380 Rhodanese signature 1. 35 46 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Amir_2395 80f7256b8263bde42e8be53cf4b95217 261 SUPERFAMILY SSF51735 11 259 1.06E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2395 80f7256b8263bde42e8be53cf4b95217 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2395 80f7256b8263bde42e8be53cf4b95217 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2395 80f7256b8263bde42e8be53cf4b95217 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2395 80f7256b8263bde42e8be53cf4b95217 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2395 80f7256b8263bde42e8be53cf4b95217 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2395 80f7256b8263bde42e8be53cf4b95217 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2395 80f7256b8263bde42e8be53cf4b95217 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 1.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2395 80f7256b8263bde42e8be53cf4b95217 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 1.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2395 80f7256b8263bde42e8be53cf4b95217 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2395 80f7256b8263bde42e8be53cf4b95217 261 Gene3D G3DSA:3.40.50.720 9 260 8.8E-65 T 14-10-2018 Amir_2395 80f7256b8263bde42e8be53cf4b95217 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_2395 80f7256b8263bde42e8be53cf4b95217 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 256 4.9E-49 T 14-10-2018 Amir_2728 76d346997c0f939f0349db270d83b832 256 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 16 254 1.3E-98 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 Amir_2728 76d346997c0f939f0349db270d83b832 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_2728 76d346997c0f939f0349db270d83b832 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 253 8.3E-51 T 14-10-2018 Amir_2728 76d346997c0f939f0349db270d83b832 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 102 122 1.2E-50 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 Amir_2728 76d346997c0f939f0349db270d83b832 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 232 251 1.2E-50 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 Amir_2728 76d346997c0f939f0349db270d83b832 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 20 37 1.2E-50 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 Amir_2728 76d346997c0f939f0349db270d83b832 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 82 99 1.2E-50 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 Amir_2728 76d346997c0f939f0349db270d83b832 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 206 225 1.2E-50 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 Amir_2728 76d346997c0f939f0349db270d83b832 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 167 190 1.2E-50 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 Amir_2728 76d346997c0f939f0349db270d83b832 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2728 76d346997c0f939f0349db270d83b832 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 8.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2728 76d346997c0f939f0349db270d83b832 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 8.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2728 76d346997c0f939f0349db270d83b832 256 SUPERFAMILY SSF51735 13 254 4.65E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2728 76d346997c0f939f0349db270d83b832 256 Gene3D G3DSA:3.40.50.720 5 256 2.3E-70 T 14-10-2018 Amir_3466 2c707d05ddfe49261c257bcf6fe05ad2 596 Gene3D G3DSA:3.40.190.10 12 284 2.7E-66 T 14-10-2018 Amir_3466 2c707d05ddfe49261c257bcf6fe05ad2 596 PIRSF PIRSF002741 5 538 8.9E-94 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amir_3466 2c707d05ddfe49261c257bcf6fe05ad2 596 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 447 2.6E-82 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Amir_3466 2c707d05ddfe49261c257bcf6fe05ad2 596 Gene3D G3DSA:3.10.105.10 291 511 2.9E-55 T 14-10-2018 Amir_3466 2c707d05ddfe49261c257bcf6fe05ad2 596 SUPERFAMILY SSF53850 28 534 8.69E-120 T 14-10-2018 Amir_4758 dd81fe4c66aef718b586fb049bfb6d99 824 Gene3D G3DSA:2.60.120.380 673 759 6.0E-9 T 14-10-2018 Amir_4758 dd81fe4c66aef718b586fb049bfb6d99 824 SMART SM00631 246 542 6.8E-39 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Amir_4758 dd81fe4c66aef718b586fb049bfb6d99 824 Pfam PF00246 Zinc carboxypeptidase 256 532 9.0E-44 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Amir_4758 dd81fe4c66aef718b586fb049bfb6d99 824 Gene3D G3DSA:3.40.630.10 241 547 3.0E-66 T 14-10-2018 Amir_4758 dd81fe4c66aef718b586fb049bfb6d99 824 SUPERFAMILY SSF53187 244 533 3.84E-50 T 14-10-2018 Amir_6857 a95e7d2f84f02e4ba148eefb4a00fe3a 274 SMART SM00530 18 72 0.0016 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_6857 a95e7d2f84f02e4ba148eefb4a00fe3a 274 Pfam PF13560 Helix-turn-helix domain 18 67 1.5E-6 T 14-10-2018 Amir_2214 3e537a437613a66c918986e31982b555 195 Gene3D G3DSA:1.10.357.10 1 187 7.9E-44 T 14-10-2018 Amir_2214 3e537a437613a66c918986e31982b555 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2214 3e537a437613a66c918986e31982b555 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2214 3e537a437613a66c918986e31982b555 195 SUPERFAMILY SSF48498 94 186 6.45E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_2214 3e537a437613a66c918986e31982b555 195 SUPERFAMILY SSF46689 4 77 2.43E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2214 3e537a437613a66c918986e31982b555 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 7.2E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2214 3e537a437613a66c918986e31982b555 195 Pfam PF13305 WHG domain 94 164 2.8E-7 T 14-10-2018 IPR025996 WHG domain Amir_5310 34a31fd78615a58783368c019f1e4aef 253 Gene3D G3DSA:1.10.10.10 1 70 2.8E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5310 34a31fd78615a58783368c019f1e4aef 253 Pfam PF00455 DeoR C terminal sensor domain 77 233 2.3E-44 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain Amir_5310 34a31fd78615a58783368c019f1e4aef 253 SMART SM01134 73 234 6.8E-56 T 14-10-2018 Amir_5310 34a31fd78615a58783368c019f1e4aef 253 SMART SM00420 6 58 5.5E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_5310 34a31fd78615a58783368c019f1e4aef 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.9E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_5310 34a31fd78615a58783368c019f1e4aef 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.9E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_5310 34a31fd78615a58783368c019f1e4aef 253 SUPERFAMILY SSF46785 4 62 2.73E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5310 34a31fd78615a58783368c019f1e4aef 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 1.5E-13 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_5310 34a31fd78615a58783368c019f1e4aef 253 SUPERFAMILY SSF100950 75 234 5.76E-24 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Amir_0406 3ba2db53119468b7b68946fc58165b66 254 SUPERFAMILY SSF53213 1 254 6.28E-79 T 14-10-2018 Amir_0406 3ba2db53119468b7b68946fc58165b66 254 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 25 237 2.4E-36 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 Amir_0406 3ba2db53119468b7b68946fc58165b66 254 Gene3D G3DSA:3.40.830.10 1 254 7.3E-70 T 14-10-2018 Amir_0406 3ba2db53119468b7b68946fc58165b66 254 PIRSF PIRSF006157 1 254 5.9E-79 T 14-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 Amir_0682 f1f92a9a35d8d2ccb0373d2bb1ef850f 276 Pfam PF03167 Uracil DNA glycosylase superfamily 90 267 3.9E-24 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amir_0682 f1f92a9a35d8d2ccb0373d2bb1ef850f 276 Gene3D G3DSA:3.40.470.10 47 276 1.4E-64 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amir_0682 f1f92a9a35d8d2ccb0373d2bb1ef850f 276 SUPERFAMILY SSF52141 58 271 8.18E-42 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amir_0682 f1f92a9a35d8d2ccb0373d2bb1ef850f 276 SMART SM00987 90 267 1.8E-30 T 14-10-2018 Amir_0682 f1f92a9a35d8d2ccb0373d2bb1ef850f 276 SMART SM00986 90 267 1.8E-30 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amir_1868 53043d7eb066d326e75654f2665c9fd0 744 Pfam PF00553 Cellulose binding domain 36 135 1.3E-32 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_1868 53043d7eb066d326e75654f2665c9fd0 744 Gene3D G3DSA:2.60.40.290 29 138 2.4E-34 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_1868 53043d7eb066d326e75654f2665c9fd0 744 SUPERFAMILY SSF69318 268 531 2.22E-10 T 14-10-2018 Amir_1868 53043d7eb066d326e75654f2665c9fd0 744 Gene3D G3DSA:2.60.40.10 172 260 3.6E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_1868 53043d7eb066d326e75654f2665c9fd0 744 SUPERFAMILY SSF49384 33 137 5.65E-31 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_1868 53043d7eb066d326e75654f2665c9fd0 744 SMART SM00637 36 135 4.6E-42 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_6831 56b40ab38e71c538974f5731641a5737 211 SUPERFAMILY SSF50814 51 209 1.81E-45 T 14-10-2018 IPR012674 Calycin Amir_6831 56b40ab38e71c538974f5731641a5737 211 Hamap MF_01297 UPF0678 fatty acid-binding protein-like protein . 47 210 34.491 T 14-10-2018 IPR022939 Uncharacterised protein family UPF0678 Amir_6831 56b40ab38e71c538974f5731641a5737 211 Pfam PF08768 Domain of unknown function (DUF1794) 57 208 2.7E-53 T 14-10-2018 IPR014878 Domain of unknown function DUF1794 Amir_6831 56b40ab38e71c538974f5731641a5737 211 Gene3D G3DSA:2.40.128.20 17 211 7.5E-82 T 14-10-2018 IPR012674 Calycin Amir_4694 ca07a17abad58705e87b3da024949245 833 Gene3D G3DSA:3.30.70.1230 395 559 2.9E-11 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_4694 ca07a17abad58705e87b3da024949245 833 SMART SM01043 101 246 4.3E-47 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_4694 ca07a17abad58705e87b3da024949245 833 SUPERFAMILY SSF52540 555 786 8.8E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4694 ca07a17abad58705e87b3da024949245 833 SUPERFAMILY SSF48452 96 264 3.46E-39 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4694 ca07a17abad58705e87b3da024949245 833 SUPERFAMILY SSF55073 383 531 6.75E-13 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_4694 ca07a17abad58705e87b3da024949245 833 SUPERFAMILY SSF46894 4 94 6.24E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4694 ca07a17abad58705e87b3da024949245 833 Pfam PF00486 Transcriptional regulatory protein, C terminal 23 94 1.7E-4 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4694 ca07a17abad58705e87b3da024949245 833 SMART SM00862 15 94 6.4E-4 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4694 ca07a17abad58705e87b3da024949245 833 Gene3D G3DSA:1.10.10.10 1 97 1.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4694 ca07a17abad58705e87b3da024949245 833 Gene3D G3DSA:1.25.40.10 99 278 4.7E-47 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4694 ca07a17abad58705e87b3da024949245 833 Pfam PF03704 Bacterial transcriptional activator domain 101 246 5.1E-44 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_4694 ca07a17abad58705e87b3da024949245 833 Pfam PF13191 AAA ATPase domain 563 743 9.3E-11 T 14-10-2018 Amir_2778 117a8128145b7fde2b860e8971a03f70 317 SUPERFAMILY SSF51679 6 308 5.74E-49 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_2778 117a8128145b7fde2b860e8971a03f70 317 Pfam PF00296 Luciferase-like monooxygenase 16 295 1.2E-43 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_2778 117a8128145b7fde2b860e8971a03f70 317 Gene3D G3DSA:3.20.20.30 5 316 6.0E-62 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_1235 d0093dee7feb204d50b549d1b3ff17d9 444 Gene3D G3DSA:2.40.30.10 310 414 5.3E-29 T 14-10-2018 Amir_1235 d0093dee7feb204d50b549d1b3ff17d9 444 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 5 414 1.6E-164 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Amir_1235 d0093dee7feb204d50b549d1b3ff17d9 444 Gene3D G3DSA:3.40.50.300 2 216 7.7E-65 T 14-10-2018 Amir_1235 d0093dee7feb204d50b549d1b3ff17d9 444 SUPERFAMILY SSF52540 3 212 4.64E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1235 d0093dee7feb204d50b549d1b3ff17d9 444 Gene3D G3DSA:2.40.30.10 219 308 9.3E-24 T 14-10-2018 Amir_1235 d0093dee7feb204d50b549d1b3ff17d9 444 SUPERFAMILY SSF50447 217 308 1.56E-19 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amir_1235 d0093dee7feb204d50b549d1b3ff17d9 444 PRINTS PR00315 GTP-binding elongation factor signature 65 73 9.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_1235 d0093dee7feb204d50b549d1b3ff17d9 444 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_1235 d0093dee7feb204d50b549d1b3ff17d9 444 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_1235 d0093dee7feb204d50b549d1b3ff17d9 444 PRINTS PR00315 GTP-binding elongation factor signature 138 147 9.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_1235 d0093dee7feb204d50b549d1b3ff17d9 444 PRINTS PR00315 GTP-binding elongation factor signature 6 19 9.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_1235 d0093dee7feb204d50b549d1b3ff17d9 444 Pfam PF00009 Elongation factor Tu GTP binding domain 5 203 8.1E-38 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_1235 d0093dee7feb204d50b549d1b3ff17d9 444 SUPERFAMILY SSF50465 311 414 1.94E-26 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Amir_1235 d0093dee7feb204d50b549d1b3ff17d9 444 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Amir_0657 de28b4b62fc0ca331b9b6e58d1592115 491 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 8 465 39.615 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Amir_0657 de28b4b62fc0ca331b9b6e58d1592115 491 Gene3D G3DSA:3.90.550.10 4 265 2.9E-73 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0657 de28b4b62fc0ca331b9b6e58d1592115 491 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 10 465 1.6E-164 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Amir_0657 de28b4b62fc0ca331b9b6e58d1592115 491 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 330 364 3.6E-4 T 14-10-2018 IPR001451 Hexapeptide repeat Amir_0657 de28b4b62fc0ca331b9b6e58d1592115 491 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 408 441 1.6E-5 T 14-10-2018 IPR001451 Hexapeptide repeat Amir_0657 de28b4b62fc0ca331b9b6e58d1592115 491 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 280 312 1.1E-4 T 14-10-2018 IPR001451 Hexapeptide repeat Amir_0657 de28b4b62fc0ca331b9b6e58d1592115 491 SUPERFAMILY SSF53448 11 266 4.12E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0657 de28b4b62fc0ca331b9b6e58d1592115 491 Gene3D G3DSA:2.160.10.10 266 453 1.2E-50 T 14-10-2018 Amir_0657 de28b4b62fc0ca331b9b6e58d1592115 491 Pfam PF12804 MobA-like NTP transferase domain 12 145 2.8E-19 T 14-10-2018 IPR025877 MobA-like NTP transferase Amir_0657 de28b4b62fc0ca331b9b6e58d1592115 491 SUPERFAMILY SSF51161 262 451 5.89E-39 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Amir_6290 b89cdf9f6db73a5e5b063b2126e8f682 492 Pfam PF12282 Signal transduction histidine kinase 4 146 4.6E-54 T 14-10-2018 IPR022066 Signal transduction histidine kinase, N-terminal Amir_6290 b89cdf9f6db73a5e5b063b2126e8f682 492 SUPERFAMILY SSF55874 353 488 6.02E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6290 b89cdf9f6db73a5e5b063b2126e8f682 492 Gene3D G3DSA:3.30.450.20 132 282 1.6E-40 T 14-10-2018 Amir_6290 b89cdf9f6db73a5e5b063b2126e8f682 492 Pfam PF08448 PAS fold 173 282 1.7E-10 T 14-10-2018 IPR013656 PAS fold-4 Amir_6290 b89cdf9f6db73a5e5b063b2126e8f682 492 Gene3D G3DSA:3.30.565.10 352 492 2.3E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6290 b89cdf9f6db73a5e5b063b2126e8f682 492 Gene3D G3DSA:3.30.450.280 1 131 4.9E-45 T 14-10-2018 IPR038424 Signal transduction histidine kinase, N-terminal domain superfamily Amir_6290 b89cdf9f6db73a5e5b063b2126e8f682 492 SMART SM00387 390 490 7.1E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_6290 b89cdf9f6db73a5e5b063b2126e8f682 492 Pfam PF07568 Histidine kinase 296 366 3.5E-24 T 14-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain Amir_6290 b89cdf9f6db73a5e5b063b2126e8f682 492 SUPERFAMILY SSF55785 175 287 5.58E-7 T 14-10-2018 IPR035965 PAS domain superfamily Amir_6290 b89cdf9f6db73a5e5b063b2126e8f682 492 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 394 489 1.9E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5924 019173abf1639c51567bf7c9e54924c4 172 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 2 168 22.63 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Amir_5924 019173abf1639c51567bf7c9e54924c4 172 SUPERFAMILY SSF50346 98 168 1.92E-15 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Amir_5924 019173abf1639c51567bf7c9e54924c4 172 Pfam PF01782 RimM N-terminal domain 4 83 3.7E-21 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 Amir_5924 019173abf1639c51567bf7c9e54924c4 172 Pfam PF05239 PRC-barrel domain 95 169 5.9E-11 T 14-10-2018 IPR027275 PRC-barrel domain Amir_5924 019173abf1639c51567bf7c9e54924c4 172 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 3 168 6.2E-38 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Amir_5924 019173abf1639c51567bf7c9e54924c4 172 Gene3D G3DSA:2.30.30.240 94 172 8.2E-12 T 14-10-2018 Amir_5924 019173abf1639c51567bf7c9e54924c4 172 Gene3D G3DSA:2.40.30.60 2 90 7.8E-22 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Amir_5924 019173abf1639c51567bf7c9e54924c4 172 SUPERFAMILY SSF50447 3 90 8.95E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 SUPERFAMILY SSF143517 1018 1178 5.62E-32 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 SUPERFAMILY SSF52540 547 804 3.65E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 Pfam PF03461 TRCF domain 1031 1113 1.8E-23 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 SUPERFAMILY SSF141259 489 569 3.27E-19 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 SUPERFAMILY SSF52540 37 362 7.77E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 Gene3D G3DSA:3.30.2060.10 143 230 4.4E-61 T 14-10-2018 Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 160 1103 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 SMART SM01058 496 597 3.4E-49 T 14-10-2018 IPR003711 CarD-like/TRCF domain Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 SMART SM00982 1030 1127 9.1E-36 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 SMART SM00487 621 811 2.8E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 SUPERFAMILY SSF52540 803 1011 1.77E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 Gene3D G3DSA:2.30.30.840 500 562 6.6E-227 T 14-10-2018 Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 Pfam PF02559 CarD-like/TRCF domain 497 596 2.4E-32 T 14-10-2018 IPR003711 CarD-like/TRCF domain Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 SUPERFAMILY SSF52540 380 482 4.88E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 Pfam PF00271 Helicase conserved C-terminal domain 831 930 1.9E-14 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 Gene3D G3DSA:3.40.50.300 497 1010 6.6E-227 T 14-10-2018 Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 Gene3D G3DSA:3.40.50.300 563 802 6.6E-227 T 14-10-2018 Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 Gene3D G3DSA:3.90.1150.50 1026 1144 7.8E-25 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 Gene3D G3DSA:3.40.50.11180 52 310 4.4E-61 T 14-10-2018 Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 SMART SM00490 847 931 2.0E-15 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 Pfam PF00270 DEAD/DEAH box helicase 646 787 3.5E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amir_0665 e9ee3dbd360859523ca58ab8049986d7 1187 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 45 1143 27.29 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Amir_0396 983f4574e94f35f10709128e2d2e5a5e 309 SUPERFAMILY SSF51430 9 308 1.57E-64 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_0396 983f4574e94f35f10709128e2d2e5a5e 309 Pfam PF00248 Aldo/keto reductase family 10 308 1.5E-55 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_0396 983f4574e94f35f10709128e2d2e5a5e 309 Gene3D G3DSA:3.20.20.100 6 306 9.0E-71 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3133 0581d0a4d32e47a84ab6e9c451933381 347 Gene3D G3DSA:3.40.47.10 210 345 1.4E-12 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3133 0581d0a4d32e47a84ab6e9c451933381 347 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 259 344 5.9E-10 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Amir_3133 0581d0a4d32e47a84ab6e9c451933381 347 Gene3D G3DSA:3.40.47.10 1 198 1.5E-34 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3133 0581d0a4d32e47a84ab6e9c451933381 347 SUPERFAMILY SSF53901 43 345 3.08E-27 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_0604 a910c55b547e6daf42e5ccb3c398b2db 77 PRINTS PR00974 Ribosomal protein S18 family signature 40 47 8.1E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0604 a910c55b547e6daf42e5ccb3c398b2db 77 PRINTS PR00974 Ribosomal protein S18 family signature 48 62 8.1E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0604 a910c55b547e6daf42e5ccb3c398b2db 77 PRINTS PR00974 Ribosomal protein S18 family signature 30 40 8.1E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0604 a910c55b547e6daf42e5ccb3c398b2db 77 PRINTS PR00974 Ribosomal protein S18 family signature 62 72 8.1E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0604 a910c55b547e6daf42e5ccb3c398b2db 77 SUPERFAMILY SSF46911 1 75 3.66E-25 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0604 a910c55b547e6daf42e5ccb3c398b2db 77 Gene3D G3DSA:4.10.640.10 2 76 1.8E-25 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0604 a910c55b547e6daf42e5ccb3c398b2db 77 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 23 74 5.0E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0604 a910c55b547e6daf42e5ccb3c398b2db 77 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 6 75 19.118 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0604 a910c55b547e6daf42e5ccb3c398b2db 77 TIGRFAM TIGR00165 S18: ribosomal protein bS18 9 72 1.4E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0604 a910c55b547e6daf42e5ccb3c398b2db 77 Pfam PF01084 Ribosomal protein S18 22 70 9.8E-23 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0459 6bb1283a18b01d5854b0f65e40ae6357 139 SUPERFAMILY SSF103196 3 128 3.84E-35 T 14-10-2018 Amir_0459 6bb1283a18b01d5854b0f65e40ae6357 139 Gene3D G3DSA:3.30.450.30 9 132 7.0E-45 T 14-10-2018 Amir_0459 6bb1283a18b01d5854b0f65e40ae6357 139 SMART SM00960 11 101 4.2E-34 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain Amir_0459 6bb1283a18b01d5854b0f65e40ae6357 139 Pfam PF03259 Roadblock/LC7 domain 12 101 6.8E-25 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain Amir_3463 38542d6f1a3666cd17facfd3630762dc 546 Gene3D G3DSA:3.40.50.300 281 540 3.2E-77 T 14-10-2018 Amir_3463 38542d6f1a3666cd17facfd3630762dc 546 Gene3D G3DSA:3.40.50.300 8 280 1.7E-79 T 14-10-2018 Amir_3463 38542d6f1a3666cd17facfd3630762dc 546 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 269 0.007 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_3463 38542d6f1a3666cd17facfd3630762dc 546 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 500 532 3.8E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_3463 38542d6f1a3666cd17facfd3630762dc 546 Pfam PF00005 ABC transporter 299 449 7.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3463 38542d6f1a3666cd17facfd3630762dc 546 Pfam PF00005 ABC transporter 31 185 2.3E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3463 38542d6f1a3666cd17facfd3630762dc 546 SUPERFAMILY SSF52540 282 520 6.09E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3463 38542d6f1a3666cd17facfd3630762dc 546 SMART SM00382 39 243 6.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3463 38542d6f1a3666cd17facfd3630762dc 546 SMART SM00382 307 498 2.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3463 38542d6f1a3666cd17facfd3630762dc 546 SUPERFAMILY SSF52540 10 256 2.08E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3463 38542d6f1a3666cd17facfd3630762dc 546 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3463 38542d6f1a3666cd17facfd3630762dc 546 ProSitePatterns PS00211 ABC transporters family signature. 421 435 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 SUPERFAMILY SSF88946 50 186 2.92E-51 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 Gene3D G3DSA:1.20.120.1810 46 93 2.6E-7 T 14-10-2018 Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 Pfam PF00140 Sigma-70 factor, region 1.2 50 83 7.1E-15 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 112 337 5.7E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 SUPERFAMILY SSF88659 189 263 2.06E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 Pfam PF04545 Sigma-70, region 4 284 337 7.3E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 309 335 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 SUPERFAMILY SSF88659 248 347 7.66E-24 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 140 153 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 PRINTS PR00046 Major sigma-70 factor signature 140 153 4.4E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 PRINTS PR00046 Major sigma-70 factor signature 309 324 4.4E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 PRINTS PR00046 Major sigma-70 factor signature 164 172 4.4E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 PRINTS PR00046 Major sigma-70 factor signature 288 300 4.4E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 PRINTS PR00046 Major sigma-70 factor signature 324 335 4.4E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 Pfam PF04542 Sigma-70 region 2 116 186 4.1E-22 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 Pfam PF04539 Sigma-70 region 3 196 271 8.1E-21 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 Gene3D G3DSA:1.10.10.10 266 349 9.0E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 Gene3D G3DSA:1.10.10.10 189 264 9.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3204 2a2b498e1cf83a37b75c32c1aff25dca 349 Gene3D G3DSA:1.10.601.10 94 188 2.0E-49 T 14-10-2018 Amir_2209 cbf6ce9674c6c9a895b2a488080a1ec9 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 369 1.4E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2209 cbf6ce9674c6c9a895b2a488080a1ec9 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 348 1.4E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2209 cbf6ce9674c6c9a895b2a488080a1ec9 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 334 1.4E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2209 cbf6ce9674c6c9a895b2a488080a1ec9 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 388 1.4E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2209 cbf6ce9674c6c9a895b2a488080a1ec9 399 Pfam PF00512 His Kinase A (phospho-acceptor) domain 172 239 1.8E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2209 cbf6ce9674c6c9a895b2a488080a1ec9 399 SMART SM00388 171 239 8.4E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2209 cbf6ce9674c6c9a895b2a488080a1ec9 399 Pfam PF01590 GAF domain 26 155 5.8E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2209 cbf6ce9674c6c9a895b2a488080a1ec9 399 SUPERFAMILY SSF47384 157 240 2.16E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_2209 cbf6ce9674c6c9a895b2a488080a1ec9 399 Gene3D G3DSA:3.30.565.10 237 389 4.5E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2209 cbf6ce9674c6c9a895b2a488080a1ec9 399 SUPERFAMILY SSF55874 228 389 2.89E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2209 cbf6ce9674c6c9a895b2a488080a1ec9 399 Gene3D G3DSA:3.30.450.40 10 167 2.9E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_2209 cbf6ce9674c6c9a895b2a488080a1ec9 399 SMART SM00387 283 391 1.5E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2209 cbf6ce9674c6c9a895b2a488080a1ec9 399 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 283 389 6.0E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2209 cbf6ce9674c6c9a895b2a488080a1ec9 399 SMART SM00065 25 166 9.8E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2209 cbf6ce9674c6c9a895b2a488080a1ec9 399 SUPERFAMILY SSF55781 27 156 7.36E-23 T 14-10-2018 Amir_2209 cbf6ce9674c6c9a895b2a488080a1ec9 399 Gene3D G3DSA:1.10.287.130 168 236 2.8E-21 T 14-10-2018 Amir_2638 b10d641c5dffb452f201c02a19fc7a2a 477 Gene3D G3DSA:3.50.50.60 1 153 2.3E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2638 b10d641c5dffb452f201c02a19fc7a2a 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 6.9E-5 T 14-10-2018 Amir_2638 b10d641c5dffb452f201c02a19fc7a2a 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 6.9E-5 T 14-10-2018 Amir_2638 b10d641c5dffb452f201c02a19fc7a2a 477 SUPERFAMILY SSF51905 1 383 6.48E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2638 b10d641c5dffb452f201c02a19fc7a2a 477 Pfam PF13450 NAD(P)-binding Rossmann-like domain 9 62 1.7E-8 T 14-10-2018 Amir_2638 b10d641c5dffb452f201c02a19fc7a2a 477 Gene3D G3DSA:3.50.50.60 154 240 3.5E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2638 b10d641c5dffb452f201c02a19fc7a2a 477 Pfam PF00743 Flavin-binding monooxygenase-like 82 213 1.2E-10 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 Amir_2638 b10d641c5dffb452f201c02a19fc7a2a 477 Gene3D G3DSA:3.50.50.60 307 427 1.0E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1810 4015f950e072931f81b513750651f54a 238 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 9 211 1.0E-51 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase Amir_1810 4015f950e072931f81b513750651f54a 238 Gene3D G3DSA:3.40.50.1000 11 215 9.6E-52 T 14-10-2018 IPR023214 HAD superfamily Amir_1810 4015f950e072931f81b513750651f54a 238 SUPERFAMILY SSF56784 8 237 1.48E-38 T 14-10-2018 IPR036412 HAD-like superfamily Amir_1810 4015f950e072931f81b513750651f54a 238 Pfam PF00702 haloacid dehalogenase-like hydrolase 9 204 1.2E-15 T 14-10-2018 Amir_1810 4015f950e072931f81b513750651f54a 238 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 99 205 6.8E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_1810 4015f950e072931f81b513750651f54a 238 Gene3D G3DSA:1.10.150.240 22 112 9.6E-52 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Amir_2891 780902fe21874bb669f71466b7c74fea 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 71 7.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2891 780902fe21874bb669f71466b7c74fea 236 Gene3D G3DSA:1.10.357.10 15 219 2.7E-31 T 14-10-2018 Amir_2891 780902fe21874bb669f71466b7c74fea 236 SUPERFAMILY SSF46689 12 93 4.77E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_6326 12985709c919e783f5d8a4b4a2900c33 63 Gene3D G3DSA:2.20.25.10 10 59 2.0E-11 T 14-10-2018 Amir_6326 12985709c919e783f5d8a4b4a2900c33 63 SUPERFAMILY SSF158997 2 59 2.22E-12 T 14-10-2018 Amir_6326 12985709c919e783f5d8a4b4a2900c33 63 Pfam PF03966 Trm112p-like protein 4 48 2.6E-5 T 14-10-2018 IPR005651 Trm112-like Amir_0086 b05a784b7e7effe06ca400daaa57eadd 252 Pfam PF10615 Protein of unknown function (DUF2470) 168 239 3.1E-7 T 14-10-2018 IPR019595 Domain of unknown function DUF2470 Amir_0086 b05a784b7e7effe06ca400daaa57eadd 252 Gene3D G3DSA:3.20.180.10 157 244 3.3E-14 T 14-10-2018 IPR037119 Haem oxygenase HugZ-like superfamily Amir_0086 b05a784b7e7effe06ca400daaa57eadd 252 SUPERFAMILY SSF50475 56 248 2.2E-19 T 14-10-2018 Amir_2574 cf5063711114693e5f79fa6d57c6c3ee 449 SUPERFAMILY SSF53850 54 436 8.28E-69 T 14-10-2018 Amir_2574 cf5063711114693e5f79fa6d57c6c3ee 449 Pfam PF01547 Bacterial extracellular solute-binding protein 58 343 2.2E-34 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_2574 cf5063711114693e5f79fa6d57c6c3ee 449 Gene3D G3DSA:3.40.190.10 162 426 2.0E-113 T 14-10-2018 Amir_2574 cf5063711114693e5f79fa6d57c6c3ee 449 Gene3D G3DSA:3.40.190.10 68 368 2.0E-113 T 14-10-2018 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 1.5E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 1.5E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 1.5E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 1.5E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 1.5E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 268 286 1.5E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 1.5E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 1.5E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 233 254 1.5E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 6 305 4.3E-119 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 Gene3D G3DSA:3.50.50.60 121 244 1.6E-117 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 SUPERFAMILY SSF51905 6 305 3.73E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 4.0E-33 T 14-10-2018 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 4.0E-33 T 14-10-2018 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.0E-33 T 14-10-2018 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 4.0E-33 T 14-10-2018 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 4.0E-33 T 14-10-2018 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 294 9.9E-46 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_7086 bf06a70dcb500abe17ca4f9291257f4e 331 Gene3D G3DSA:3.50.50.60 8 304 1.6E-117 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6017 18ffb00ea4ce21f8972a52861199f136 532 Pfam PF01842 ACT domain 460 516 9.6E-9 T 14-10-2018 IPR002912 ACT domain Amir_6017 18ffb00ea4ce21f8972a52861199f136 532 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 9 529 5.3E-183 T 14-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 Amir_6017 18ffb00ea4ce21f8972a52861199f136 532 Gene3D G3DSA:3.30.1330.90 319 457 2.7E-42 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Amir_6017 18ffb00ea4ce21f8972a52861199f136 532 SUPERFAMILY SSF51735 103 285 8.71E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6017 18ffb00ea4ce21f8972a52861199f136 532 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Amir_6017 18ffb00ea4ce21f8972a52861199f136 532 SUPERFAMILY SSF143548 325 453 7.32E-30 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Amir_6017 18ffb00ea4ce21f8972a52861199f136 532 Gene3D G3DSA:3.40.50.720 101 282 1.3E-119 T 14-10-2018 Amir_6017 18ffb00ea4ce21f8972a52861199f136 532 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 316 2.1E-32 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Amir_6017 18ffb00ea4ce21f8972a52861199f136 532 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 284 2.2E-61 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Amir_6017 18ffb00ea4ce21f8972a52861199f136 532 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Amir_6017 18ffb00ea4ce21f8972a52861199f136 532 Gene3D G3DSA:3.30.70.260 458 532 2.4E-20 T 14-10-2018 Amir_6017 18ffb00ea4ce21f8972a52861199f136 532 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Amir_6017 18ffb00ea4ce21f8972a52861199f136 532 Gene3D G3DSA:3.40.50.720 10 308 1.3E-119 T 14-10-2018 Amir_6017 18ffb00ea4ce21f8972a52861199f136 532 SUPERFAMILY SSF55021 456 527 4.2E-12 T 14-10-2018 Amir_6017 18ffb00ea4ce21f8972a52861199f136 532 SUPERFAMILY SSF52283 6 137 3.78E-36 T 14-10-2018 Amir_4887 16a1e3cf2ae6252188e8b556237634c0 267 Gene3D G3DSA:1.10.3720.10 68 260 1.8E-20 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4887 16a1e3cf2ae6252188e8b556237634c0 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 258 5.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_4887 16a1e3cf2ae6252188e8b556237634c0 267 SUPERFAMILY SSF161098 69 250 6.8E-26 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3276 9ab5f2cd31deb88ae08d3293327d6cc7 407 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 349 358 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_3276 9ab5f2cd31deb88ae08d3293327d6cc7 407 SUPERFAMILY SSF48264 19 407 1.96E-84 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3276 9ab5f2cd31deb88ae08d3293327d6cc7 407 PRINTS PR00359 B-class P450 signature 279 290 3.4E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3276 9ab5f2cd31deb88ae08d3293327d6cc7 407 PRINTS PR00359 B-class P450 signature 143 159 3.4E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3276 9ab5f2cd31deb88ae08d3293327d6cc7 407 PRINTS PR00359 B-class P450 signature 297 324 3.4E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3276 9ab5f2cd31deb88ae08d3293327d6cc7 407 PRINTS PR00359 B-class P450 signature 356 367 3.4E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3276 9ab5f2cd31deb88ae08d3293327d6cc7 407 PRINTS PR00359 B-class P450 signature 160 175 3.4E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3276 9ab5f2cd31deb88ae08d3293327d6cc7 407 PRINTS PR00359 B-class P450 signature 347 356 3.4E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3276 9ab5f2cd31deb88ae08d3293327d6cc7 407 PRINTS PR00359 B-class P450 signature 96 107 3.4E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3276 9ab5f2cd31deb88ae08d3293327d6cc7 407 PRINTS PR00359 B-class P450 signature 197 219 3.4E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3276 9ab5f2cd31deb88ae08d3293327d6cc7 407 Gene3D G3DSA:1.10.630.10 13 407 1.9E-107 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3276 9ab5f2cd31deb88ae08d3293327d6cc7 407 PRINTS PR00385 P450 superfamily signature 347 356 5.3E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3276 9ab5f2cd31deb88ae08d3293327d6cc7 407 PRINTS PR00385 P450 superfamily signature 279 290 5.3E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3276 9ab5f2cd31deb88ae08d3293327d6cc7 407 PRINTS PR00385 P450 superfamily signature 356 367 5.3E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3276 9ab5f2cd31deb88ae08d3293327d6cc7 407 PRINTS PR00385 P450 superfamily signature 242 259 5.3E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3276 9ab5f2cd31deb88ae08d3293327d6cc7 407 Pfam PF00067 Cytochrome P450 277 374 2.1E-17 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1004 f4d97724a1248c5430ee845f7c0a93c6 437 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 147 315 3.2E-7 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Amir_1004 f4d97724a1248c5430ee845f7c0a93c6 437 Gene3D G3DSA:3.20.20.70 162 314 1.8E-48 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_1004 f4d97724a1248c5430ee845f7c0a93c6 437 SUPERFAMILY SSF54675 12 145 1.51E-39 T 14-10-2018 Amir_1004 f4d97724a1248c5430ee845f7c0a93c6 437 Gene3D G3DSA:3.20.140.10 8 161 7.9E-43 T 14-10-2018 Amir_1004 f4d97724a1248c5430ee845f7c0a93c6 437 SUPERFAMILY SSF51690 147 433 3.14E-85 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Amir_1004 f4d97724a1248c5430ee845f7c0a93c6 437 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 17 427 2.1E-133 T 14-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 Amir_1004 f4d97724a1248c5430ee845f7c0a93c6 437 PIRSF PIRSF000484 9 434 1.4E-96 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Amir_1004 f4d97724a1248c5430ee845f7c0a93c6 437 Gene3D G3DSA:3.20.140.10 315 430 1.4E-5 T 14-10-2018 Amir_1216 0dcbb678be0808db212296e88adb44b6 613 SUPERFAMILY SSF50447 175 297 1.34E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amir_1216 0dcbb678be0808db212296e88adb44b6 613 TIGRFAM TIGR01393 lepA: elongation factor 4 14 605 7.0E-293 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 Amir_1216 0dcbb678be0808db212296e88adb44b6 613 Gene3D G3DSA:3.30.70.3380 378 488 1.8E-38 T 14-10-2018 Amir_1216 0dcbb678be0808db212296e88adb44b6 613 Gene3D G3DSA:3.30.70.2570 489 563 4.4E-32 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily Amir_1216 0dcbb678be0808db212296e88adb44b6 613 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Amir_1216 0dcbb678be0808db212296e88adb44b6 613 Gene3D G3DSA:3.30.70.870 296 377 1.9E-34 T 14-10-2018 Amir_1216 0dcbb678be0808db212296e88adb44b6 613 Gene3D G3DSA:2.40.30.10 196 295 4.4E-33 T 14-10-2018 Amir_1216 0dcbb678be0808db212296e88adb44b6 613 SUPERFAMILY SSF54980 301 380 1.8E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like Amir_1216 0dcbb678be0808db212296e88adb44b6 613 PRINTS PR00315 GTP-binding elongation factor signature 17 30 3.7E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_1216 0dcbb678be0808db212296e88adb44b6 613 PRINTS PR00315 GTP-binding elongation factor signature 100 111 3.7E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_1216 0dcbb678be0808db212296e88adb44b6 613 PRINTS PR00315 GTP-binding elongation factor signature 60 68 3.7E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_1216 0dcbb678be0808db212296e88adb44b6 613 PRINTS PR00315 GTP-binding elongation factor signature 84 94 3.7E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_1216 0dcbb678be0808db212296e88adb44b6 613 PRINTS PR00315 GTP-binding elongation factor signature 136 145 3.7E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_1216 0dcbb678be0808db212296e88adb44b6 613 SMART SM00838 407 491 0.0017 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Amir_1216 0dcbb678be0808db212296e88adb44b6 613 Hamap MF_00071 Elongation factor 4 [lepA]. 1 607 285.397 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 Amir_1216 0dcbb678be0808db212296e88adb44b6 613 Pfam PF00679 Elongation factor G C-terminus 408 494 1.2E-21 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Amir_1216 0dcbb678be0808db212296e88adb44b6 613 SUPERFAMILY SSF54980 408 503 1.53E-22 T 14-10-2018 IPR035647 EF-G domain III/V-like Amir_1216 0dcbb678be0808db212296e88adb44b6 613 Pfam PF06421 GTP-binding protein LepA C-terminus 498 602 2.1E-48 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Amir_1216 0dcbb678be0808db212296e88adb44b6 613 Pfam PF00009 Elongation factor Tu GTP binding domain 15 191 7.6E-51 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amir_1216 0dcbb678be0808db212296e88adb44b6 613 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 186 7.7E-18 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amir_1216 0dcbb678be0808db212296e88adb44b6 613 Gene3D G3DSA:3.40.50.300 13 195 1.2E-68 T 14-10-2018 Amir_1216 0dcbb678be0808db212296e88adb44b6 613 SUPERFAMILY SSF52540 8 215 4.18E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4322 3664335d0d97ce64ed248d1c0da25069 280 SUPERFAMILY SSF161098 81 276 3.01E-21 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4322 3664335d0d97ce64ed248d1c0da25069 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 277 1.1E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_4322 3664335d0d97ce64ed248d1c0da25069 280 Gene3D G3DSA:1.10.3720.10 76 279 2.8E-19 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0115 2b9729d9d0fe920fd790a38a5435333b 387 SUPERFAMILY SSF52440 175 283 3.74E-33 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amir_0115 2b9729d9d0fe920fd790a38a5435333b 387 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 385 1.8E-145 T 14-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain Amir_0115 2b9729d9d0fe920fd790a38a5435333b 387 SUPERFAMILY SSF56059 8 384 2.4E-71 T 14-10-2018 Amir_0115 2b9729d9d0fe920fd790a38a5435333b 387 Gene3D G3DSA:3.30.1490.330 267 344 4.3E-24 T 14-10-2018 Amir_5753 4a1497556ac178342254fc315ec62ac7 1037 Pfam PF08264 Anticodon-binding domain of tRNA 692 829 2.6E-23 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Amir_5753 4a1497556ac178342254fc315ec62ac7 1037 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 25 641 2.3E-186 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_5753 4a1497556ac178342254fc315ec62ac7 1037 Gene3D G3DSA:3.90.740.10 209 403 1.3E-230 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Amir_5753 4a1497556ac178342254fc315ec62ac7 1037 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 3.3E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Amir_5753 4a1497556ac178342254fc315ec62ac7 1037 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 3.3E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Amir_5753 4a1497556ac178342254fc315ec62ac7 1037 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 3.3E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Amir_5753 4a1497556ac178342254fc315ec62ac7 1037 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 231 254 3.3E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Amir_5753 4a1497556ac178342254fc315ec62ac7 1037 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 397 412 3.3E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Amir_5753 4a1497556ac178342254fc315ec62ac7 1037 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 11 839 1.6E-249 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Amir_5753 4a1497556ac178342254fc315ec62ac7 1037 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 9 1030 13.935 T 14-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amir_5753 4a1497556ac178342254fc315ec62ac7 1037 SUPERFAMILY SSF52374 11 645 3.58E-124 T 14-10-2018 Amir_5753 4a1497556ac178342254fc315ec62ac7 1037 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_5753 4a1497556ac178342254fc315ec62ac7 1037 Gene3D G3DSA:1.10.730.10 649 823 1.4E-40 T 14-10-2018 Amir_5753 4a1497556ac178342254fc315ec62ac7 1037 Gene3D G3DSA:3.40.50.620 21 633 1.3E-230 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_5753 4a1497556ac178342254fc315ec62ac7 1037 SUPERFAMILY SSF47323 662 891 3.55E-44 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_5753 4a1497556ac178342254fc315ec62ac7 1037 SUPERFAMILY SSF50677 212 399 1.36E-52 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Amir_3383 af0ffefe1e9ddcf3217868a78592d85b 530 SUPERFAMILY SSF51905 6 510 3.63E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3383 af0ffefe1e9ddcf3217868a78592d85b 530 Pfam PF12831 FAD dependent oxidoreductase 7 510 7.0E-108 T 14-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal Amir_3383 af0ffefe1e9ddcf3217868a78592d85b 530 Gene3D G3DSA:3.40.50.720 2 87 9.4E-11 T 14-10-2018 Amir_0029 a0ea15d3c93c4c1e57f0e3ba05edf3d9 211 Gene3D G3DSA:3.40.50.720 1 211 1.7E-46 T 14-10-2018 Amir_0029 a0ea15d3c93c4c1e57f0e3ba05edf3d9 211 SUPERFAMILY SSF51735 1 205 5.52E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0029 a0ea15d3c93c4c1e57f0e3ba05edf3d9 211 Pfam PF13460 NAD(P)H-binding 7 191 9.4E-46 T 14-10-2018 IPR016040 NAD(P)-binding domain Amir_3603 14f69465bc8c36d66526550ca4ec1b61 962 Pfam PF00664 ABC transporter transmembrane region 441 662 2.5E-12 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_3603 14f69465bc8c36d66526550ca4ec1b61 962 SMART SM00382 746 932 6.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3603 14f69465bc8c36d66526550ca4ec1b61 962 Pfam PF00005 ABC transporter 737 886 1.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3603 14f69465bc8c36d66526550ca4ec1b61 962 Gene3D G3DSA:3.40.50.300 715 958 4.1E-99 T 14-10-2018 Amir_3603 14f69465bc8c36d66526550ca4ec1b61 962 SUPERFAMILY SSF90123 383 706 5.89E-38 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_3603 14f69465bc8c36d66526550ca4ec1b61 962 ProSitePatterns PS00211 ABC transporters family signature. 858 872 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3603 14f69465bc8c36d66526550ca4ec1b61 962 SUPERFAMILY SSF52540 714 957 2.13E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3603 14f69465bc8c36d66526550ca4ec1b61 962 Gene3D G3DSA:1.20.1560.10 381 702 5.1E-36 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 Gene3D G3DSA:3.40.50.720 1938 2384 5.3E-72 T 14-10-2018 Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 SUPERFAMILY SSF52151 1227 1523 2.88E-55 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 964 1081 5.2E-39 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1231 1553 9.2E-39 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 SUPERFAMILY SSF51412 18 197 9.15E-15 T 14-10-2018 Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 SUPERFAMILY SSF47336 1779 1871 6.67E-12 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 Gene3D G3DSA:3.40.366.20 1151 1553 4.3E-82 T 14-10-2018 Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 Gene3D G3DSA:3.40.47.10 686 1150 3.8E-160 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 Pfam PF03060 Nitronate monooxygenase 93 194 1.2E-9 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 Pfam PF03060 Nitronate monooxygenase 333 542 1.4E-7 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 SUPERFAMILY SSF53901 691 1131 5.07E-81 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 Pfam PF00550 Phosphopantetheine attachment site 1786 1835 2.7E-4 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 Pfam PF00550 Phosphopantetheine attachment site 1688 1757 4.6E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 SUPERFAMILY SSF47336 1681 1780 8.64E-16 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1091 1156 3.2E-7 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 SUPERFAMILY SSF51735 2111 2360 1.34E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 Pfam PF08659 KR domain 2112 2333 6.5E-36 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 Gene3D G3DSA:1.10.1200.10 1673 1767 1.7E-24 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 Gene3D G3DSA:1.10.1200.10 1772 1865 3.0E-22 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 SMART SM00825 Beta-ketoacyl synthase 694 1134 1.4E-116 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 SUPERFAMILY SSF51735 1933 2080 5.12E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 Gene3D G3DSA:3.20.20.70 15 285 4.3E-32 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 Gene3D G3DSA:3.20.20.70 329 685 4.0E-63 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 SUPERFAMILY SSF51412 333 559 1.19E-13 T 14-10-2018 Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 693 956 4.9E-71 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2112 2335 1.8E-28 T 14-10-2018 Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 Pfam PF00698 Acyl transferase domain 1230 1505 4.6E-40 T 14-10-2018 IPR014043 Acyl transferase Amir_2493 6e7fa2d9a196bf2ee0f6f34b8ee829c2 2386 SUPERFAMILY SSF55048 1358 1419 3.14E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_0355 0e41188ec4004c407f8e6cb61cfde1c1 485 SUPERFAMILY SSF55073 286 461 1.02E-37 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_0355 0e41188ec4004c407f8e6cb61cfde1c1 485 SMART SM00267 269 461 7.9E-43 T 14-10-2018 IPR000160 GGDEF domain Amir_0355 0e41188ec4004c407f8e6cb61cfde1c1 485 Pfam PF00990 Diguanylate cyclase, GGDEF domain 409 457 1.2E-4 T 14-10-2018 IPR000160 GGDEF domain Amir_0355 0e41188ec4004c407f8e6cb61cfde1c1 485 Pfam PF00990 Diguanylate cyclase, GGDEF domain 280 391 2.5E-28 T 14-10-2018 IPR000160 GGDEF domain Amir_0355 0e41188ec4004c407f8e6cb61cfde1c1 485 Gene3D G3DSA:3.30.70.270 273 464 8.8E-47 T 14-10-2018 Amir_0355 0e41188ec4004c407f8e6cb61cfde1c1 485 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 278 399 5.2E-32 T 14-10-2018 IPR000160 GGDEF domain Amir_0699 0101c65688d3da893e867215e227cb6d 406 Pfam PF02803 Thiolase, C-terminal domain 283 404 2.7E-47 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Amir_0699 0101c65688d3da893e867215e227cb6d 406 SUPERFAMILY SSF53901 283 404 2.66E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_0699 0101c65688d3da893e867215e227cb6d 406 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 403 3.3E-134 T 14-10-2018 IPR002155 Thiolase GO:0016747 Amir_0699 0101c65688d3da893e867215e227cb6d 406 SUPERFAMILY SSF53901 3 282 2.23E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_0699 0101c65688d3da893e867215e227cb6d 406 Gene3D G3DSA:3.40.47.10 2 405 1.6E-132 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_0699 0101c65688d3da893e867215e227cb6d 406 PIRSF PIRSF000429 1 406 5.0E-126 T 14-10-2018 IPR002155 Thiolase GO:0016747 Amir_0699 0101c65688d3da893e867215e227cb6d 406 Pfam PF00108 Thiolase, N-terminal domain 5 273 2.1E-57 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Amir_0699 0101c65688d3da893e867215e227cb6d 406 ProSitePatterns PS00737 Thiolases signature 2. 351 367 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 Gene3D G3DSA:3.30.450.20 11 126 8.0E-16 T 14-10-2018 Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 129 2.8E-13 T 14-10-2018 IPR000014 PAS domain Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 Pfam PF00072 Response regulator receiver domain 418 529 3.2E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 SMART SM00091 12 78 4.2E-6 T 14-10-2018 IPR000014 PAS domain Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 SUPERFAMILY SSF47384 147 230 6.28E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 SUPERFAMILY SSF55874 223 398 1.44E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 SUPERFAMILY SSF52172 415 538 5.12E-27 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 Pfam PF00989 PAS fold 14 125 4.5E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 SMART SM00387 273 396 8.5E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 Gene3D G3DSA:1.10.287.130 151 230 1.3E-17 T 14-10-2018 Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 SUPERFAMILY SSF55785 12 125 2.62E-14 T 14-10-2018 IPR035965 PAS domain superfamily Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 SMART SM00448 416 529 1.3E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 393 3.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 374 3.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 353 3.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 339 3.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 Gene3D G3DSA:3.30.565.10 233 404 1.4E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 Gene3D G3DSA:3.40.50.2300 414 542 2.7E-24 T 14-10-2018 Amir_2362 4f1d7d7ab621baf1e74667a28839ff90 546 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 274 395 1.0E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5230 3ace0c13689f175f955969cadbf77dbd 142 SUPERFAMILY SSF88946 6 73 1.8E-6 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5230 3ace0c13689f175f955969cadbf77dbd 142 SUPERFAMILY SSF88659 84 136 2.83E-7 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5230 3ace0c13689f175f955969cadbf77dbd 142 Gene3D G3DSA:1.10.1740.10 2 74 7.4E-7 T 14-10-2018 Amir_5230 3ace0c13689f175f955969cadbf77dbd 142 Gene3D G3DSA:1.10.10.10 82 141 8.3E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5230 3ace0c13689f175f955969cadbf77dbd 142 Pfam PF08281 Sigma-70, region 4 85 135 8.7E-8 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_6358 0992b5907984ad5721247ca7fe58796a 127 SUPERFAMILY SSF46785 6 78 2.02E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6358 0992b5907984ad5721247ca7fe58796a 127 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 3.3E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_6358 0992b5907984ad5721247ca7fe58796a 127 Gene3D G3DSA:1.10.10.10 8 125 5.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6358 0992b5907984ad5721247ca7fe58796a 127 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 6.8E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_6358 0992b5907984ad5721247ca7fe58796a 127 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 6.8E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_6358 0992b5907984ad5721247ca7fe58796a 127 SMART SM00345 15 74 3.5E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_4749 f423564f917107d1274bf3ebd7d85d2b 373 SUPERFAMILY SSF52283 18 180 2.98E-45 T 14-10-2018 Amir_4749 f423564f917107d1274bf3ebd7d85d2b 373 Gene3D G3DSA:3.40.50.720 150 328 1.6E-131 T 14-10-2018 Amir_4749 f423564f917107d1274bf3ebd7d85d2b 373 SMART SM01003 20 150 2.7E-56 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Amir_4749 f423564f917107d1274bf3ebd7d85d2b 373 Gene3D G3DSA:3.40.50.720 19 369 1.6E-131 T 14-10-2018 Amir_4749 f423564f917107d1274bf3ebd7d85d2b 373 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 154 369 1.2E-63 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Amir_4749 f423564f917107d1274bf3ebd7d85d2b 373 SUPERFAMILY SSF51735 150 325 8.26E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4749 f423564f917107d1274bf3ebd7d85d2b 373 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 20 150 7.0E-39 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Amir_4749 f423564f917107d1274bf3ebd7d85d2b 373 SMART SM01002 159 321 2.9E-73 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.30.559.30 189 398 3.3E-47 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF52777 3028 3198 2.56E-48 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.30.559.10 3027 3391 1.3E-150 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF52777 1147 1371 2.45E-46 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.30.559.10 1994 2350 4.1E-115 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF52777 172 386 9.34E-32 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SMART SM00823 Phosphopantetheine attachment site 2938 3007 2.2E-10 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SMART SM00823 Phosphopantetheine attachment site 903 970 3.6E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SMART SM00823 Phosphopantetheine attachment site 1894 1961 3.7E-5 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SMART SM00823 Phosphopantetheine attachment site 3981 4049 5.3E-12 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.30.559.10 6 188 9.7E-43 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF52777 1983 2179 1.45E-35 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF47336 899 964 1.96E-13 T 14-10-2018 IPR036736 ACP-like superfamily Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:1.10.1200.10 897 966 1.4E-19 T 14-10-2018 IPR036736 ACP-like superfamily Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.30.559.10 998 1317 3.0E-92 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF56801 3441 3994 5.1E-146 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF47336 1888 1956 1.22E-16 T 14-10-2018 IPR036736 ACP-like superfamily Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.30.559.30 2165 2415 4.1E-115 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF52777 6 165 9.56E-26 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 ProSitePatterns PS00012 Phosphopantetheine attachment site. 926 941 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF56801 388 916 1.05E-142 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2962 2977 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF52777 4226 4444 1.89E-35 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3622 3633 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF47336 2931 3001 5.1E-19 T 14-10-2018 IPR036736 ACP-like superfamily Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.30.559.30 4223 4444 1.4E-74 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 446 822 9.5E-121 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2459 2858 4.5E-108 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3503 3896 1.2E-122 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1422 1817 1.1E-128 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1918 1933 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF13193 AMP-binding enzyme C-terminal domain 3880 3956 1.3E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF13193 AMP-binding enzyme C-terminal domain 806 878 3.9E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF13193 AMP-binding enzyme C-terminal domain 1801 1868 5.5E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF13193 AMP-binding enzyme C-terminal domain 2842 2913 6.2E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.40.50.12780 3469 3866 1.2E-130 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.40.50.12780 2424 2828 1.0E-124 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.40.50.12780 1388 1787 1.2E-139 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.40.50.12780 413 792 2.9E-129 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF52777 993 1161 1.56E-24 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF47336 3976 4045 1.7E-16 T 14-10-2018 IPR036736 ACP-like superfamily Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF00501 AMP-binding enzyme 1403 1793 1.1E-96 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF00501 AMP-binding enzyme 3482 3872 3.0E-90 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF00501 AMP-binding enzyme 426 798 2.6E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF00501 AMP-binding enzyme 2439 2834 1.0E-85 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1534 1545 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.30.559.30 1147 1378 3.0E-92 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF56801 1362 1907 2.49E-146 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.30.559.30 3202 3448 1.3E-150 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF52777 4063 4238 1.33E-25 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 ProSitePatterns PS00455 Putative AMP-binding domain signature. 548 559 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.40.50.1820 1884 1993 3.1E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.30.559.10 4082 4389 1.4E-74 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF52777 2164 2402 3.78E-51 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4004 4019 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF56801 2398 2951 1.31E-134 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF00550 Phosphopantetheine attachment site 2940 3001 7.8E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF00550 Phosphopantetheine attachment site 1896 1956 2.1E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF00550 Phosphopantetheine attachment site 906 964 1.1E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF00550 Phosphopantetheine attachment site 3983 4044 1.2E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 SUPERFAMILY SSF52777 3205 3469 8.45E-60 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:1.10.1200.10 3968 4054 8.2E-24 T 14-10-2018 IPR036736 ACP-like superfamily Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:1.10.1200.10 2926 3008 8.7E-27 T 14-10-2018 IPR036736 ACP-like superfamily Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2571 2582 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF00668 Condensation domain 3025 3461 1.2E-95 T 14-10-2018 IPR001242 Condensation domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF00668 Condensation domain 4082 4359 4.7E-36 T 14-10-2018 IPR001242 Condensation domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF00668 Condensation domain 1985 2418 9.2E-61 T 14-10-2018 IPR001242 Condensation domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF00668 Condensation domain 3 407 1.3E-36 T 14-10-2018 IPR001242 Condensation domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Pfam PF00668 Condensation domain 993 1381 2.7E-47 T 14-10-2018 IPR001242 Condensation domain Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.30.300.30 2829 2925 1.3E-29 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.30.300.30 1788 1883 4.5E-25 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.30.300.30 793 891 1.9E-30 T 14-10-2018 Amir_5064 4f5a9f8fe588a9d8596175d1dbd4e567 4449 Gene3D G3DSA:3.30.300.30 3867 3967 7.5E-30 T 14-10-2018 Amir_1693 5191cc362ab790d2bfdb5e318f5a0ee2 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 359 508 3.2E-39 T 14-10-2018 IPR000160 GGDEF domain Amir_1693 5191cc362ab790d2bfdb5e318f5a0ee2 527 SUPERFAMILY SSF55073 364 512 1.65E-39 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_1693 5191cc362ab790d2bfdb5e318f5a0ee2 527 Gene3D G3DSA:3.30.70.270 345 513 3.7E-51 T 14-10-2018 Amir_1693 5191cc362ab790d2bfdb5e318f5a0ee2 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 355 511 6.8E-36 T 14-10-2018 IPR000160 GGDEF domain Amir_1693 5191cc362ab790d2bfdb5e318f5a0ee2 527 SMART SM00267 348 514 7.2E-53 T 14-10-2018 IPR000160 GGDEF domain Amir_3157 1d6297606de505044524deec326a49d0 950 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 271 344 1.6E-22 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_3157 1d6297606de505044524deec326a49d0 950 Pfam PF02867 Ribonucleotide reductase, barrel domain 348 881 1.1E-172 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_3157 1d6297606de505044524deec326a49d0 950 SUPERFAMILY SSF51998 347 886 5.19E-172 T 14-10-2018 Amir_3157 1d6297606de505044524deec326a49d0 950 PRINTS PR01183 Ribonucleotide reductase large chain signature 423 442 2.4E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_3157 1d6297606de505044524deec326a49d0 950 PRINTS PR01183 Ribonucleotide reductase large chain signature 595 618 2.4E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_3157 1d6297606de505044524deec326a49d0 950 PRINTS PR01183 Ribonucleotide reductase large chain signature 661 684 2.4E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_3157 1d6297606de505044524deec326a49d0 950 PRINTS PR01183 Ribonucleotide reductase large chain signature 736 763 2.4E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_3157 1d6297606de505044524deec326a49d0 950 PRINTS PR01183 Ribonucleotide reductase large chain signature 558 569 2.4E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_3157 1d6297606de505044524deec326a49d0 950 PRINTS PR01183 Ribonucleotide reductase large chain signature 633 655 2.4E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_3157 1d6297606de505044524deec326a49d0 950 Pfam PF03477 ATP cone domain 127 211 1.6E-7 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Amir_3157 1d6297606de505044524deec326a49d0 950 Pfam PF03477 ATP cone domain 16 112 2.1E-14 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Amir_3157 1d6297606de505044524deec326a49d0 950 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 726 747 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_3157 1d6297606de505044524deec326a49d0 950 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 275 884 1.8E-203 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_3157 1d6297606de505044524deec326a49d0 950 Gene3D G3DSA:3.20.70.20 201 892 1.5E-237 T 14-10-2018 Amir_3157 1d6297606de505044524deec326a49d0 950 SUPERFAMILY SSF48168 132 346 3.66E-62 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_1076 e0a9e5f4adc9fc1567f8aded1ada04bc 231 Pfam PF12833 Helix-turn-helix domain 153 224 9.4E-12 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_1076 e0a9e5f4adc9fc1567f8aded1ada04bc 231 SMART SM00342 147 229 6.4E-7 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_1076 e0a9e5f4adc9fc1567f8aded1ada04bc 231 Gene3D G3DSA:1.10.10.60 134 228 1.2E-13 T 14-10-2018 Amir_0800 d51f8aa54d5b45984be5536433c3ea30 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 109 2.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0800 d51f8aa54d5b45984be5536433c3ea30 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 129 2.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0800 d51f8aa54d5b45984be5536433c3ea30 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 77 93 2.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0800 d51f8aa54d5b45984be5536433c3ea30 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 144 164 2.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0800 d51f8aa54d5b45984be5536433c3ea30 167 Gene3D G3DSA:1.10.10.10 25 167 1.6E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0800 d51f8aa54d5b45984be5536433c3ea30 167 SUPERFAMILY SSF46785 23 166 6.41E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0800 d51f8aa54d5b45984be5536433c3ea30 167 Pfam PF12802 MarR family 58 117 9.2E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0800 d51f8aa54d5b45984be5536433c3ea30 167 SMART SM00347 51 153 1.7E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_6917 b2dd6719533d262ffc10d554012331a8 344 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 86 97 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Amir_6917 b2dd6719533d262ffc10d554012331a8 344 PIRSF PIRSF001359 6 341 1.8E-66 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Amir_6917 b2dd6719533d262ffc10d554012331a8 344 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 158 169 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Amir_6917 b2dd6719533d262ffc10d554012331a8 344 SUPERFAMILY SSF51569 4 340 7.18E-101 T 14-10-2018 Amir_6917 b2dd6719533d262ffc10d554012331a8 344 Pfam PF01116 Fructose-bisphosphate aldolase class-II 9 340 2.0E-82 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Amir_6917 b2dd6719533d262ffc10d554012331a8 344 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 3 338 2.4E-143 T 14-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Amir_6917 b2dd6719533d262ffc10d554012331a8 344 Gene3D G3DSA:3.20.20.70 1 344 6.1E-131 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_6917 b2dd6719533d262ffc10d554012331a8 344 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 10 340 6.0E-77 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Amir_6817 b5d3fa3b296211b4ebea3ef102dc8bed 565 SUPERFAMILY SSF140459 93 264 5.23E-10 T 14-10-2018 Amir_6817 b5d3fa3b296211b4ebea3ef102dc8bed 565 Pfam PF00823 PPE family 106 248 2.8E-9 T 14-10-2018 IPR000030 PPE family Amir_6817 b5d3fa3b296211b4ebea3ef102dc8bed 565 Gene3D G3DSA:1.20.1260.20 98 266 4.5E-12 T 14-10-2018 IPR038332 PPE superfamily Amir_6817 b5d3fa3b296211b4ebea3ef102dc8bed 565 PRINTS PR01228 Eggshell protein signature 430 445 1.4E-5 T 14-10-2018 Amir_6817 b5d3fa3b296211b4ebea3ef102dc8bed 565 PRINTS PR01228 Eggshell protein signature 362 373 1.4E-5 T 14-10-2018 Amir_6817 b5d3fa3b296211b4ebea3ef102dc8bed 565 PRINTS PR01228 Eggshell protein signature 495 513 1.4E-5 T 14-10-2018 Amir_6817 b5d3fa3b296211b4ebea3ef102dc8bed 565 PRINTS PR01228 Eggshell protein signature 457 467 1.4E-5 T 14-10-2018 Amir_1579 632d3c91e247483e11f539ad7febb6df 358 Pfam PF01068 ATP dependent DNA ligase domain 11 199 9.4E-29 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Amir_1579 632d3c91e247483e11f539ad7febb6df 358 SUPERFAMILY SSF56091 6 199 9.25E-39 T 14-10-2018 Amir_1579 632d3c91e247483e11f539ad7febb6df 358 Gene3D G3DSA:3.30.470.30 8 199 6.9E-38 T 14-10-2018 Amir_1579 632d3c91e247483e11f539ad7febb6df 358 Gene3D G3DSA:2.40.50.140 201 335 1.0E-24 T 14-10-2018 Amir_1579 632d3c91e247483e11f539ad7febb6df 358 SUPERFAMILY SSF50249 202 334 1.71E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_1579 632d3c91e247483e11f539ad7febb6df 358 Pfam PF04679 ATP dependent DNA ligase C terminal region 222 328 7.1E-15 T 14-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Amir_2478 c8c20139f30350fde4acd93c8bb32efc 396 Gene3D G3DSA:1.10.101.10 224 293 8.7E-12 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Amir_2478 c8c20139f30350fde4acd93c8bb32efc 396 SUPERFAMILY SSF53955 316 381 5.07E-8 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Amir_2478 c8c20139f30350fde4acd93c8bb32efc 396 SUPERFAMILY SSF47090 232 291 1.52E-11 T 14-10-2018 IPR036365 PGBD-like superfamily Amir_2478 c8c20139f30350fde4acd93c8bb32efc 396 Gene3D G3DSA:1.10.530.10 294 396 3.7E-5 T 14-10-2018 Amir_2478 c8c20139f30350fde4acd93c8bb32efc 396 Pfam PF13560 Helix-turn-helix domain 9 72 2.2E-10 T 14-10-2018 Amir_2478 c8c20139f30350fde4acd93c8bb32efc 396 Pfam PF01471 Putative peptidoglycan binding domain 239 290 3.5E-7 T 14-10-2018 IPR002477 Peptidoglycan binding-like Amir_5390 c82929e815be78561ef6c9734157aa86 147 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 9 146 3.6E-32 T 14-10-2018 IPR011747 Conserved hypothetical protein CHP02241 Amir_5390 c82929e815be78561ef6c9734157aa86 147 Pfam PF06841 T4-like virus tail tube protein gp19 12 145 8.3E-30 T 14-10-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 Amir_3334 ffd80e26c720ae8ba90058826dd75ef5 299 SUPERFAMILY SSF51735 11 295 9.68E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3334 ffd80e26c720ae8ba90058826dd75ef5 299 Gene3D G3DSA:3.40.50.720 1 299 2.2E-82 T 14-10-2018 Amir_3334 ffd80e26c720ae8ba90058826dd75ef5 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3334 ffd80e26c720ae8ba90058826dd75ef5 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 2.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3334 ffd80e26c720ae8ba90058826dd75ef5 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 2.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3334 ffd80e26c720ae8ba90058826dd75ef5 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 2.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3334 ffd80e26c720ae8ba90058826dd75ef5 299 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 1.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3334 ffd80e26c720ae8ba90058826dd75ef5 299 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 1.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3334 ffd80e26c720ae8ba90058826dd75ef5 299 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3334 ffd80e26c720ae8ba90058826dd75ef5 299 Pfam PF00106 short chain dehydrogenase 17 215 1.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3565 9b0993e9102b12c49d41852c3b9c6e7d 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3565 9b0993e9102b12c49d41852c3b9c6e7d 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3565 9b0993e9102b12c49d41852c3b9c6e7d 189 Gene3D G3DSA:1.10.357.10 9 189 5.3E-61 T 14-10-2018 Amir_3565 9b0993e9102b12c49d41852c3b9c6e7d 189 SUPERFAMILY SSF48498 77 184 3.26E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3565 9b0993e9102b12c49d41852c3b9c6e7d 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 1.7E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3565 9b0993e9102b12c49d41852c3b9c6e7d 189 SUPERFAMILY SSF46689 3 79 9.23E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_7045 f9a70aecea0af21a183a0d7f14e76ac9 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7045 f9a70aecea0af21a183a0d7f14e76ac9 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7045 f9a70aecea0af21a183a0d7f14e76ac9 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7045 f9a70aecea0af21a183a0d7f14e76ac9 250 Gene3D G3DSA:3.40.50.720 2 250 1.1E-82 T 14-10-2018 Amir_7045 f9a70aecea0af21a183a0d7f14e76ac9 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 247 3.1E-64 T 14-10-2018 Amir_7045 f9a70aecea0af21a183a0d7f14e76ac9 250 SUPERFAMILY SSF51735 9 248 1.46E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_7045 f9a70aecea0af21a183a0d7f14e76ac9 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_7045 f9a70aecea0af21a183a0d7f14e76ac9 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 186 2.4E-4 T 14-10-2018 Amir_7045 f9a70aecea0af21a183a0d7f14e76ac9 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7045 f9a70aecea0af21a183a0d7f14e76ac9 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7045 f9a70aecea0af21a183a0d7f14e76ac9 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7045 f9a70aecea0af21a183a0d7f14e76ac9 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7045 f9a70aecea0af21a183a0d7f14e76ac9 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7045 f9a70aecea0af21a183a0d7f14e76ac9 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2681 b88ac643953d77f93fad22d21132a342 1816 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 410 533 4.5E-14 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2681 b88ac643953d77f93fad22d21132a342 1816 Gene3D G3DSA:3.40.50.720 1203 1644 6.3E-127 T 14-10-2018 Amir_2681 b88ac643953d77f93fad22d21132a342 1816 Gene3D G3DSA:3.40.366.10 566 854 2.0E-159 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_2681 b88ac643953d77f93fad22d21132a342 1816 SUPERFAMILY SSF53901 29 406 1.76E-105 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2681 b88ac643953d77f93fad22d21132a342 1816 SUPERFAMILY SSF47336 1660 1741 2.09E-22 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2681 b88ac643953d77f93fad22d21132a342 1816 Gene3D G3DSA:3.40.47.10 25 484 6.8E-190 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2681 b88ac643953d77f93fad22d21132a342 1816 Pfam PF00698 Acyl transferase domain 567 843 8.4E-60 T 14-10-2018 IPR014043 Acyl transferase Amir_2681 b88ac643953d77f93fad22d21132a342 1816 Gene3D G3DSA:1.10.1200.10 1651 1743 3.6E-34 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2681 b88ac643953d77f93fad22d21132a342 1816 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 197 213 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_2681 b88ac643953d77f93fad22d21132a342 1816 SMART SM00826 918 1081 9.6E-81 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2681 b88ac643953d77f93fad22d21132a342 1816 Pfam PF14765 Polyketide synthase dehydratase 918 1190 7.5E-52 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2681 b88ac643953d77f93fad22d21132a342 1816 Gene3D G3DSA:3.10.129.110 907 1196 8.9E-113 T 14-10-2018 Amir_2681 b88ac643953d77f93fad22d21132a342 1816 SUPERFAMILY SSF51735 1382 1633 9.66E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2681 b88ac643953d77f93fad22d21132a342 1816 SMART SM00823 Phosphopantetheine attachment site 1668 1740 3.6E-31 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2681 b88ac643953d77f93fad22d21132a342 1816 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1695 1710 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_2681 b88ac643953d77f93fad22d21132a342 1816 SUPERFAMILY SSF55048 691 749 1.31E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_2681 b88ac643953d77f93fad22d21132a342 1816 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 292 407 2.2E-44 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_2681 b88ac643953d77f93fad22d21132a342 1816 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 568 851 2.6E-123 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_2681 b88ac643953d77f93fad22d21132a342 1816 SMART SM00825 Beta-ketoacyl synthase 36 460 9.1E-222 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_2681 b88ac643953d77f93fad22d21132a342 1816 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 34 284 2.7E-88 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_2681 b88ac643953d77f93fad22d21132a342 1816 SMART SM01294 1669 1736 9.9E-5 T 14-10-2018 Amir_2681 b88ac643953d77f93fad22d21132a342 1816 SUPERFAMILY SSF51735 1199 1373 9.84E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2681 b88ac643953d77f93fad22d21132a342 1816 SUPERFAMILY SSF52151 564 840 5.75E-80 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_2681 b88ac643953d77f93fad22d21132a342 1816 Pfam PF08990 Erythronolide synthase docking 3 27 8.2E-11 T 14-10-2018 IPR015083 Polyketide synthase, docking domain GO:0016740|GO:0048037 Amir_2681 b88ac643953d77f93fad22d21132a342 1816 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1387 1565 7.4E-54 T 14-10-2018 Amir_2681 b88ac643953d77f93fad22d21132a342 1816 Pfam PF08659 KR domain 1387 1563 6.5E-56 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2681 b88ac643953d77f93fad22d21132a342 1816 Gene3D G3DSA:3.30.70.3290 489 899 2.0E-159 T 14-10-2018 Amir_2681 b88ac643953d77f93fad22d21132a342 1816 Pfam PF00550 Phosphopantetheine attachment site 1670 1735 5.6E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3957 bc98c58caa6d10bd12229b2785dbf955 289 Gene3D G3DSA:1.10.10.10 208 283 1.4E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3957 bc98c58caa6d10bd12229b2785dbf955 289 SUPERFAMILY SSF51206 77 179 3.54E-18 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Amir_3957 bc98c58caa6d10bd12229b2785dbf955 289 SUPERFAMILY SSF46785 211 282 8.51E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3957 bc98c58caa6d10bd12229b2785dbf955 289 SMART SM00419 228 276 7.8E-8 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amir_3957 bc98c58caa6d10bd12229b2785dbf955 289 Pfam PF00027 Cyclic nucleotide-binding domain 98 177 2.1E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_3957 bc98c58caa6d10bd12229b2785dbf955 289 Pfam PF13545 Crp-like helix-turn-helix domain 215 281 1.4E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amir_3957 bc98c58caa6d10bd12229b2785dbf955 289 SMART SM00100 74 192 5.9E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_3957 bc98c58caa6d10bd12229b2785dbf955 289 Gene3D G3DSA:2.60.120.10 73 207 2.5E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_0080 1fd808682315bcdaf8eeed0e678ded19 108 Gene3D G3DSA:3.20.170.20 1 107 1.4E-24 T 14-10-2018 Amir_0080 1fd808682315bcdaf8eeed0e678ded19 108 Pfam PF06108 Protein of unknown function (DUF952) 5 91 2.7E-18 T 14-10-2018 IPR009297 Protein of unknown function DUF952 Amir_0080 1fd808682315bcdaf8eeed0e678ded19 108 SUPERFAMILY SSF56399 2 105 7.19E-21 T 14-10-2018 Amir_6513 8043bc9ec44ad9d7c3cf60e45f3420c8 781 Gene3D G3DSA:1.10.486.10 403 588 3.1E-117 T 14-10-2018 Amir_6513 8043bc9ec44ad9d7c3cf60e45f3420c8 781 SUPERFAMILY SSF52540 18 682 2.42E-171 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6513 8043bc9ec44ad9d7c3cf60e45f3420c8 781 Pfam PF00580 UvrD/REP helicase N-terminal domain 23 291 1.4E-76 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Amir_6513 8043bc9ec44ad9d7c3cf60e45f3420c8 781 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 19 767 6.1E-291 T 14-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 Amir_6513 8043bc9ec44ad9d7c3cf60e45f3420c8 781 Pfam PF13361 UvrD-like helicase C-terminal domain 298 654 8.7E-62 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Amir_6513 8043bc9ec44ad9d7c3cf60e45f3420c8 781 Gene3D G3DSA:3.40.50.300 23 293 2.4E-98 T 14-10-2018 Amir_6513 8043bc9ec44ad9d7c3cf60e45f3420c8 781 Gene3D G3DSA:3.40.50.300 300 673 3.1E-117 T 14-10-2018 Amir_6513 8043bc9ec44ad9d7c3cf60e45f3420c8 781 Gene3D G3DSA:1.10.10.160 124 203 2.4E-98 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily Amir_2012 1274604338b65a617fa5de00bc9b4c11 514 Pfam PF05922 Peptidase inhibitor I9 64 106 2.1E-4 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Amir_2012 1274604338b65a617fa5de00bc9b4c11 514 PRINTS PR00723 Subtilisin serine protease family (S8) signature 178 191 7.1E-15 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_2012 1274604338b65a617fa5de00bc9b4c11 514 PRINTS PR00723 Subtilisin serine protease family (S8) signature 142 161 7.1E-15 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_2012 1274604338b65a617fa5de00bc9b4c11 514 PRINTS PR00723 Subtilisin serine protease family (S8) signature 334 350 7.1E-15 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_2012 1274604338b65a617fa5de00bc9b4c11 514 Gene3D G3DSA:3.40.50.200 115 389 1.6E-80 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_2012 1274604338b65a617fa5de00bc9b4c11 514 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 147 158 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_2012 1274604338b65a617fa5de00bc9b4c11 514 Pfam PF00082 Subtilase family 139 369 3.2E-34 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_2012 1274604338b65a617fa5de00bc9b4c11 514 SUPERFAMILY SSF54897 44 109 4.31E-9 T 14-10-2018 Amir_2012 1274604338b65a617fa5de00bc9b4c11 514 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 182 192 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Amir_2012 1274604338b65a617fa5de00bc9b4c11 514 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 335 345 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_2012 1274604338b65a617fa5de00bc9b4c11 514 Gene3D G3DSA:3.30.70.80 39 110 1.3E-15 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Amir_2012 1274604338b65a617fa5de00bc9b4c11 514 SUPERFAMILY SSF52743 115 376 1.18E-67 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_0298 c2962a89b4a7a9d14e300d97a402911a 272 SMART SM00382 32 224 5.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0298 c2962a89b4a7a9d14e300d97a402911a 272 Gene3D G3DSA:3.40.50.300 2 261 3.4E-60 T 14-10-2018 Amir_0298 c2962a89b4a7a9d14e300d97a402911a 272 Pfam PF00005 ABC transporter 24 175 3.5E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0298 c2962a89b4a7a9d14e300d97a402911a 272 SUPERFAMILY SSF52540 8 238 9.78E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0298 c2962a89b4a7a9d14e300d97a402911a 272 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3579 fac49d13248f907eb965c6115e49d2a8 67 SUPERFAMILY SSF160582 3 64 3.4E-27 T 14-10-2018 IPR038020 MbtH-like domain superfamily Amir_3579 fac49d13248f907eb965c6115e49d2a8 67 SMART SM00923 1 49 1.2E-19 T 14-10-2018 IPR005153 MbtH-like domain Amir_3579 fac49d13248f907eb965c6115e49d2a8 67 Gene3D G3DSA:3.90.820.10 1 67 1.5E-29 T 14-10-2018 Amir_3579 fac49d13248f907eb965c6115e49d2a8 67 Pfam PF03621 MbtH-like protein 3 49 1.1E-20 T 14-10-2018 IPR005153 MbtH-like domain Amir_5102 69b8a0d9e01f2e4a23612eebbbb71bc8 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 14-10-2018 Amir_5102 69b8a0d9e01f2e4a23612eebbbb71bc8 326 Gene3D G3DSA:1.10.260.40 2 61 2.7E-23 T 14-10-2018 Amir_5102 69b8a0d9e01f2e4a23612eebbbb71bc8 326 Gene3D G3DSA:3.40.50.2300 62 304 4.6E-65 T 14-10-2018 Amir_5102 69b8a0d9e01f2e4a23612eebbbb71bc8 326 SUPERFAMILY SSF53822 64 314 1.31E-56 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_5102 69b8a0d9e01f2e4a23612eebbbb71bc8 326 SUPERFAMILY SSF47413 7 65 9.38E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_5102 69b8a0d9e01f2e4a23612eebbbb71bc8 326 Gene3D G3DSA:3.40.50.2300 162 287 4.6E-65 T 14-10-2018 Amir_5102 69b8a0d9e01f2e4a23612eebbbb71bc8 326 Pfam PF13377 Periplasmic binding protein-like domain 172 325 4.2E-33 T 14-10-2018 Amir_5102 69b8a0d9e01f2e4a23612eebbbb71bc8 326 SMART SM00354 7 77 2.5E-27 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_5102 69b8a0d9e01f2e4a23612eebbbb71bc8 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 3.5E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_7033 7bd39cb123e00ab0300bd534ac70de4e 134 Pfam PF17249 Family of unknown function (DUF5318) 2 129 7.9E-70 T 14-10-2018 IPR035169 Protein of unknown function DUF5318 Amir_1392 16774690a60b71483e04fcbc564ef554 245 Pfam PF01553 Acyltransferase 24 152 8.7E-23 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_1392 16774690a60b71483e04fcbc564ef554 245 SUPERFAMILY SSF69593 4 223 1.03E-51 T 14-10-2018 Amir_1392 16774690a60b71483e04fcbc564ef554 245 SMART SM00563 36 155 8.8E-33 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_3766 2d4df5949b255852993b9a8f0ad8c362 571 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 129 141 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_3766 2d4df5949b255852993b9a8f0ad8c362 571 Pfam PF00069 Protein kinase domain 10 258 5.3E-48 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_3766 2d4df5949b255852993b9a8f0ad8c362 571 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 16 39 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_3766 2d4df5949b255852993b9a8f0ad8c362 571 Gene3D G3DSA:3.30.200.20 1 89 2.0E-30 T 14-10-2018 Amir_3766 2d4df5949b255852993b9a8f0ad8c362 571 Gene3D G3DSA:1.10.510.10 92 274 5.5E-42 T 14-10-2018 Amir_3766 2d4df5949b255852993b9a8f0ad8c362 571 SMART SM00220 10 261 4.4E-65 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_3766 2d4df5949b255852993b9a8f0ad8c362 571 SUPERFAMILY SSF56112 6 272 8.23E-73 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_3516 57f06f7672a46a35952e0f291af79d10 340 SUPERFAMILY SSF51735 128 305 3.2E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3516 57f06f7672a46a35952e0f291af79d10 340 Gene3D G3DSA:3.90.180.10 23 336 1.3E-106 T 14-10-2018 Amir_3516 57f06f7672a46a35952e0f291af79d10 340 Gene3D G3DSA:3.40.50.720 132 308 1.3E-106 T 14-10-2018 Amir_3516 57f06f7672a46a35952e0f291af79d10 340 Pfam PF16884 N-terminal domain of oxidoreductase 7 112 8.0E-31 T 14-10-2018 Amir_3516 57f06f7672a46a35952e0f291af79d10 340 Pfam PF00107 Zinc-binding dehydrogenase 163 284 6.3E-16 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_3516 57f06f7672a46a35952e0f291af79d10 340 SUPERFAMILY SSF50129 5 141 3.43E-27 T 14-10-2018 IPR011032 GroES-like superfamily Amir_6523 74283eea801695f5a205681f386fc169 313 SUPERFAMILY SSF103481 196 288 8.76E-16 T 14-10-2018 Amir_6523 74283eea801695f5a205681f386fc169 313 SUPERFAMILY SSF103481 40 142 1.44E-10 T 14-10-2018 Amir_6523 74283eea801695f5a205681f386fc169 313 Pfam PF00892 EamA-like transporter family 150 285 2.8E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amir_6523 74283eea801695f5a205681f386fc169 313 Pfam PF00892 EamA-like transporter family 13 139 1.3E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amir_2241 1aae965256e753480c1b012fdcb64dd7 282 TIGRFAM TIGR03690 20S_bact_beta: proteasome, beta subunit 51 276 3.0E-109 T 14-10-2018 IPR022483 Peptidase T1A, proteasome beta-subunit, actinobacteria GO:0004298|GO:0005839|GO:0010498 Amir_2241 1aae965256e753480c1b012fdcb64dd7 282 Hamap MF_02113_B Proteasome subunit beta [prcB]. 10 282 49.137 T 14-10-2018 IPR022483 Peptidase T1A, proteasome beta-subunit, actinobacteria GO:0004298|GO:0005839|GO:0010498 Amir_2241 1aae965256e753480c1b012fdcb64dd7 282 SUPERFAMILY SSF56235 41 269 1.97E-54 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_2241 1aae965256e753480c1b012fdcb64dd7 282 Pfam PF00227 Proteasome subunit 53 238 2.8E-31 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Amir_2241 1aae965256e753480c1b012fdcb64dd7 282 Gene3D G3DSA:3.60.20.10 56 282 3.7E-87 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_0530 27e485ef10ad02481816c8b7768715f9 214 SUPERFAMILY SSF46894 140 195 6.12E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_0530 27e485ef10ad02481816c8b7768715f9 214 SMART SM00421 147 209 7.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0530 27e485ef10ad02481816c8b7768715f9 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 9.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0530 27e485ef10ad02481816c8b7768715f9 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 9.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0530 27e485ef10ad02481816c8b7768715f9 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 9.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0530 27e485ef10ad02481816c8b7768715f9 214 SMART SM00448 1 121 1.3E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0530 27e485ef10ad02481816c8b7768715f9 214 Pfam PF00072 Response regulator receiver domain 3 98 2.1E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0530 27e485ef10ad02481816c8b7768715f9 214 Gene3D G3DSA:1.10.10.10 144 214 3.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0530 27e485ef10ad02481816c8b7768715f9 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 194 2.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0530 27e485ef10ad02481816c8b7768715f9 214 Gene3D G3DSA:3.40.50.2300 1 143 2.0E-24 T 14-10-2018 Amir_0530 27e485ef10ad02481816c8b7768715f9 214 SUPERFAMILY SSF52172 2 132 1.04E-21 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2647 82fcb6286da5d171e2b6b5fe2826c50f 567 SUPERFAMILY SSF101473 363 563 4.45E-42 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amir_2647 82fcb6286da5d171e2b6b5fe2826c50f 567 Gene3D G3DSA:3.30.1180.20 183 330 2.1E-42 T 14-10-2018 Amir_2647 82fcb6286da5d171e2b6b5fe2826c50f 567 SMART SM01120 391 562 2.5E-46 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amir_2647 82fcb6286da5d171e2b6b5fe2826c50f 567 Gene3D G3DSA:1.25.40.340 362 565 1.4E-44 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amir_2647 82fcb6286da5d171e2b6b5fe2826c50f 567 Gene3D G3DSA:3.40.50.10440 12 181 3.1E-47 T 14-10-2018 Amir_2647 82fcb6286da5d171e2b6b5fe2826c50f 567 Pfam PF02734 DAK2 domain 392 561 9.0E-39 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amir_2647 82fcb6286da5d171e2b6b5fe2826c50f 567 Pfam PF02733 Dak1 domain 18 325 1.5E-103 T 14-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amir_2647 82fcb6286da5d171e2b6b5fe2826c50f 567 SUPERFAMILY SSF82549 11 328 3.14E-100 T 14-10-2018 Amir_1585 e6015fa10e606260612406855edf18d7 345 Gene3D G3DSA:2.130.10.10 7 345 2.0E-111 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_1585 e6015fa10e606260612406855edf18d7 345 SUPERFAMILY SSF51004 31 338 2.49E-38 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily Amir_1585 e6015fa10e606260612406855edf18d7 345 Pfam PF10282 Lactonase, 7-bladed beta-propeller 11 345 1.3E-102 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller Amir_5411 95d729d0aef85b8665b49897da3ad57a 873 Pfam PF13424 Tetratricopeptide repeat 119 189 1.1E-10 T 14-10-2018 Amir_5411 95d729d0aef85b8665b49897da3ad57a 873 Pfam PF13424 Tetratricopeptide repeat 41 111 6.6E-8 T 14-10-2018 Amir_5411 95d729d0aef85b8665b49897da3ad57a 873 Gene3D G3DSA:1.25.40.10 113 233 2.6E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5411 95d729d0aef85b8665b49897da3ad57a 873 SUPERFAMILY SSF48452 19 229 3.79E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5411 95d729d0aef85b8665b49897da3ad57a 873 Gene3D G3DSA:1.25.40.10 8 112 1.5E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5411 95d729d0aef85b8665b49897da3ad57a 873 Pfam PF12770 CHAT domain 626 853 9.0E-37 T 14-10-2018 IPR024983 CHAT domain Amir_5411 95d729d0aef85b8665b49897da3ad57a 873 SMART SM00028 157 190 33.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5411 95d729d0aef85b8665b49897da3ad57a 873 SMART SM00028 41 74 85.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5411 95d729d0aef85b8665b49897da3ad57a 873 SMART SM00028 117 150 19.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5411 95d729d0aef85b8665b49897da3ad57a 873 SMART SM00028 81 114 68.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_6607 be5d9a15a3355fec306f5e6e87304d33 139 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.3E-37 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6607 be5d9a15a3355fec306f5e6e87304d33 139 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.3E-37 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6607 be5d9a15a3355fec306f5e6e87304d33 139 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.3E-37 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6607 be5d9a15a3355fec306f5e6e87304d33 139 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.3E-37 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6607 be5d9a15a3355fec306f5e6e87304d33 139 SUPERFAMILY SSF54686 2 137 3.27E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Amir_6607 be5d9a15a3355fec306f5e6e87304d33 139 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6607 be5d9a15a3355fec306f5e6e87304d33 139 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 2.4E-53 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6607 be5d9a15a3355fec306f5e6e87304d33 139 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.486 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6607 be5d9a15a3355fec306f5e6e87304d33 139 Gene3D G3DSA:3.90.1170.10 2 137 2.0E-49 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Amir_6607 be5d9a15a3355fec306f5e6e87304d33 139 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6607 be5d9a15a3355fec306f5e6e87304d33 139 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 4.8E-47 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Amir_3794 1a426bee1bbe80b46230c3f642c1199c 477 Gene3D G3DSA:1.10.300.10 146 249 1.7E-64 T 14-10-2018 Amir_3794 1a426bee1bbe80b46230c3f642c1199c 477 Pfam PF00709 Adenylosuccinate synthetase 47 468 3.2E-82 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Amir_3794 1a426bee1bbe80b46230c3f642c1199c 477 Gene3D G3DSA:3.40.440.10 48 303 1.7E-64 T 14-10-2018 Amir_3794 1a426bee1bbe80b46230c3f642c1199c 477 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 477 51.348 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Amir_3794 1a426bee1bbe80b46230c3f642c1199c 477 Gene3D G3DSA:3.90.170.10 319 471 2.4E-11 T 14-10-2018 Amir_3794 1a426bee1bbe80b46230c3f642c1199c 477 SMART SM00788 46 471 6.7E-21 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Amir_3794 1a426bee1bbe80b46230c3f642c1199c 477 SUPERFAMILY SSF52540 45 472 1.59E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3794 1a426bee1bbe80b46230c3f642c1199c 477 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 53 60 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Amir_6665 c4cacd91816cd4fc1da9aea67d882fe5 347 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 67 214 7.0E-30 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amir_6665 c4cacd91816cd4fc1da9aea67d882fe5 347 SUPERFAMILY SSF52518 22 347 6.33E-81 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_6665 c4cacd91816cd4fc1da9aea67d882fe5 347 Gene3D G3DSA:3.40.50.970 43 218 7.6E-25 T 14-10-2018 Amir_0219 08319f50a7b7849d6bc2cf95299c373a 476 Gene3D G3DSA:3.30.420.40 4 239 6.9E-63 T 14-10-2018 Amir_0219 08319f50a7b7849d6bc2cf95299c373a 476 PIRSF PIRSF000538 4 476 1.2E-109 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amir_0219 08319f50a7b7849d6bc2cf95299c373a 476 SUPERFAMILY SSF53067 7 241 3.77E-51 T 14-10-2018 Amir_0219 08319f50a7b7849d6bc2cf95299c373a 476 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 343 363 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amir_0219 08319f50a7b7849d6bc2cf95299c373a 476 SUPERFAMILY SSF53067 241 475 2.22E-54 T 14-10-2018 Amir_0219 08319f50a7b7849d6bc2cf95299c373a 476 Gene3D G3DSA:3.30.420.40 240 476 3.9E-64 T 14-10-2018 Amir_0219 08319f50a7b7849d6bc2cf95299c373a 476 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 238 6.8E-42 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Amir_0219 08319f50a7b7849d6bc2cf95299c373a 476 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 247 427 2.5E-29 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Amir_2853 814baff63bb60bf7f58cbb8c59d21986 365 Pfam PF08402 TOBE domain 283 355 4.4E-10 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Amir_2853 814baff63bb60bf7f58cbb8c59d21986 365 Pfam PF00005 ABC transporter 33 178 5.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2853 814baff63bb60bf7f58cbb8c59d21986 365 SMART SM00382 42 228 1.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2853 814baff63bb60bf7f58cbb8c59d21986 365 SUPERFAMILY SSF50331 273 362 6.8E-8 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Amir_2853 814baff63bb60bf7f58cbb8c59d21986 365 Gene3D G3DSA:3.40.50.300 16 274 3.8E-73 T 14-10-2018 Amir_2853 814baff63bb60bf7f58cbb8c59d21986 365 SUPERFAMILY SSF52540 18 257 3.43E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2853 814baff63bb60bf7f58cbb8c59d21986 365 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_5382 d2f51b0e82b8f91a1274a8f47f4b89f5 135 Pfam PF04965 Gene 25-like lysozyme 25 114 1.4E-24 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD Amir_5382 d2f51b0e82b8f91a1274a8f47f4b89f5 135 SUPERFAMILY SSF160719 20 127 1.12E-35 T 14-10-2018 Amir_5382 d2f51b0e82b8f91a1274a8f47f4b89f5 135 Gene3D G3DSA:3.10.450.40 1 127 3.7E-48 T 14-10-2018 Amir_3297 39d34dbc2bbaafb1d1357310092b3039 908 Gene3D G3DSA:1.25.40.10 521 816 1.7E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3297 39d34dbc2bbaafb1d1357310092b3039 908 SUPERFAMILY SSF48452 359 685 2.07E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3297 39d34dbc2bbaafb1d1357310092b3039 908 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 848 862 5.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3297 39d34dbc2bbaafb1d1357310092b3039 908 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 862 878 5.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3297 39d34dbc2bbaafb1d1357310092b3039 908 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 878 890 5.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3297 39d34dbc2bbaafb1d1357310092b3039 908 ProSitePatterns PS00622 LuxR-type HTH domain signature. 862 889 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3297 39d34dbc2bbaafb1d1357310092b3039 908 SUPERFAMILY SSF52540 10 179 3.93E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3297 39d34dbc2bbaafb1d1357310092b3039 908 Pfam PF00196 Bacterial regulatory proteins, luxR family 847 898 2.0E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3297 39d34dbc2bbaafb1d1357310092b3039 908 Pfam PF13191 AAA ATPase domain 14 162 2.5E-12 T 14-10-2018 Amir_3297 39d34dbc2bbaafb1d1357310092b3039 908 SUPERFAMILY SSF46894 836 898 5.78E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_3297 39d34dbc2bbaafb1d1357310092b3039 908 Gene3D G3DSA:1.10.10.10 828 899 4.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3297 39d34dbc2bbaafb1d1357310092b3039 908 SMART SM00421 845 902 1.7E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6253 27554f39a3a5cf468d87870126e8a435 1242 SUPERFAMILY SSF52777 121 365 4.89E-54 T 14-10-2018 Amir_6253 27554f39a3a5cf468d87870126e8a435 1242 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 133 365 9.8E-53 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Amir_6253 27554f39a3a5cf468d87870126e8a435 1242 Gene3D G3DSA:3.40.50.970 476 843 4.4E-144 T 14-10-2018 Amir_6253 27554f39a3a5cf468d87870126e8a435 1242 SMART SM00861 902 1095 9.7E-50 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amir_6253 27554f39a3a5cf468d87870126e8a435 1242 Pfam PF02779 Transketolase, pyrimidine binding domain 902 1094 1.6E-54 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amir_6253 27554f39a3a5cf468d87870126e8a435 1242 Gene3D G3DSA:3.40.50.11610 1038 1239 1.8E-162 T 14-10-2018 Amir_6253 27554f39a3a5cf468d87870126e8a435 1242 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 1100 1241 1.6E-46 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Amir_6253 27554f39a3a5cf468d87870126e8a435 1242 PIRSF PIRSF000157 2 1242 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Amir_6253 27554f39a3a5cf468d87870126e8a435 1242 Gene3D G3DSA:1.10.287.1150 394 475 9.0E-29 T 14-10-2018 Amir_6253 27554f39a3a5cf468d87870126e8a435 1242 SUPERFAMILY SSF52518 889 1102 1.37E-45 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_6253 27554f39a3a5cf468d87870126e8a435 1242 Gene3D G3DSA:3.40.50.12470 861 1117 1.8E-162 T 14-10-2018 Amir_6253 27554f39a3a5cf468d87870126e8a435 1242 Gene3D G3DSA:3.30.559.10 116 373 9.0E-53 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_6253 27554f39a3a5cf468d87870126e8a435 1242 SUPERFAMILY SSF52518 431 847 1.47E-87 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_6253 27554f39a3a5cf468d87870126e8a435 1242 Pfam PF00676 Dehydrogenase E1 component 517 841 2.0E-59 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Amir_6253 27554f39a3a5cf468d87870126e8a435 1242 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 9 43 1.8E-12 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Amir_6253 27554f39a3a5cf468d87870126e8a435 1242 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 399 1240 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Amir_6481 a92a1e53ba39bddb84d1caae9738ed61 383 Pfam PF08378 Nuclease-related domain 223 291 2.6E-6 T 14-10-2018 IPR011528 Nuclease-related domain, NERD Amir_6481 a92a1e53ba39bddb84d1caae9738ed61 383 SMART SM00271 17 71 7.6E-19 T 14-10-2018 IPR001623 DnaJ domain Amir_6481 a92a1e53ba39bddb84d1caae9738ed61 383 SUPERFAMILY SSF46565 17 89 1.09E-22 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Amir_6481 a92a1e53ba39bddb84d1caae9738ed61 383 Pfam PF00226 DnaJ domain 18 76 2.8E-17 T 14-10-2018 IPR001623 DnaJ domain Amir_6481 a92a1e53ba39bddb84d1caae9738ed61 383 ProSitePatterns PS00636 Nt-dnaJ domain signature. 56 75 - T 14-10-2018 IPR018253 DnaJ domain, conserved site Amir_6481 a92a1e53ba39bddb84d1caae9738ed61 383 PRINTS PR00625 DnaJ domain signature 71 90 3.1E-8 T 14-10-2018 IPR001623 DnaJ domain Amir_6481 a92a1e53ba39bddb84d1caae9738ed61 383 PRINTS PR00625 DnaJ domain signature 38 53 3.1E-8 T 14-10-2018 IPR001623 DnaJ domain Amir_6481 a92a1e53ba39bddb84d1caae9738ed61 383 PRINTS PR00625 DnaJ domain signature 20 38 3.1E-8 T 14-10-2018 IPR001623 DnaJ domain Amir_6481 a92a1e53ba39bddb84d1caae9738ed61 383 Gene3D G3DSA:1.10.287.110 15 105 3.0E-20 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Amir_4800 cf4a5c6e9fa1abf0bdc47b6718a396e7 922 SUPERFAMILY SSF48452 680 900 7.59E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4800 cf4a5c6e9fa1abf0bdc47b6718a396e7 922 Gene3D G3DSA:1.10.10.10 1 91 8.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4800 cf4a5c6e9fa1abf0bdc47b6718a396e7 922 PRINTS PR00364 Disease resistance protein signature 399 413 7.5E-6 T 14-10-2018 Amir_4800 cf4a5c6e9fa1abf0bdc47b6718a396e7 922 PRINTS PR00364 Disease resistance protein signature 243 258 7.5E-6 T 14-10-2018 Amir_4800 cf4a5c6e9fa1abf0bdc47b6718a396e7 922 PRINTS PR00364 Disease resistance protein signature 309 323 7.5E-6 T 14-10-2018 Amir_4800 cf4a5c6e9fa1abf0bdc47b6718a396e7 922 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 87 8.1E-8 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4800 cf4a5c6e9fa1abf0bdc47b6718a396e7 922 Gene3D G3DSA:1.25.40.10 660 837 1.3E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4800 cf4a5c6e9fa1abf0bdc47b6718a396e7 922 SUPERFAMILY SSF52540 213 466 4.78E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4800 cf4a5c6e9fa1abf0bdc47b6718a396e7 922 SUPERFAMILY SSF48452 99 225 3.64E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4800 cf4a5c6e9fa1abf0bdc47b6718a396e7 922 Gene3D G3DSA:1.25.40.10 92 230 4.1E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4800 cf4a5c6e9fa1abf0bdc47b6718a396e7 922 SUPERFAMILY SSF46894 2 88 3.68E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4800 cf4a5c6e9fa1abf0bdc47b6718a396e7 922 SMART SM01043 92 209 1.4E-17 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_4800 cf4a5c6e9fa1abf0bdc47b6718a396e7 922 Pfam PF03704 Bacterial transcriptional activator domain 106 206 1.2E-16 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_4800 cf4a5c6e9fa1abf0bdc47b6718a396e7 922 SMART SM00862 16 88 3.5E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2257 1a86f0e62d04ed969f49f7ed1f3ca840 349 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 39 213 2.5E-46 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Amir_2257 1a86f0e62d04ed969f49f7ed1f3ca840 349 Gene3D G3DSA:1.10.150.20 222 299 1.6E-63 T 14-10-2018 Amir_2257 1a86f0e62d04ed969f49f7ed1f3ca840 349 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 224 310 5.2E-19 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Amir_2257 1a86f0e62d04ed969f49f7ed1f3ca840 349 SUPERFAMILY SSF47807 224 336 3.74E-20 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Amir_2257 1a86f0e62d04ed969f49f7ed1f3ca840 349 Gene3D G3DSA:3.40.50.1010 39 328 1.6E-63 T 14-10-2018 Amir_2257 1a86f0e62d04ed969f49f7ed1f3ca840 349 SMART SM00279 221 256 1.4E-9 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Amir_2257 1a86f0e62d04ed969f49f7ed1f3ca840 349 SMART SM00475 37 314 2.2E-75 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Amir_2257 1a86f0e62d04ed969f49f7ed1f3ca840 349 SUPERFAMILY SSF88723 37 183 2.4E-37 T 14-10-2018 IPR029060 PIN-like domain superfamily Amir_4897 ec31727e68dcf709d166fb2c6b5c31e6 151 SUPERFAMILY SSF46785 9 148 3.07E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4897 ec31727e68dcf709d166fb2c6b5c31e6 151 Pfam PF12802 MarR family 39 97 7.1E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4897 ec31727e68dcf709d166fb2c6b5c31e6 151 Gene3D G3DSA:1.10.10.10 5 150 3.4E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4897 ec31727e68dcf709d166fb2c6b5c31e6 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 9.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4897 ec31727e68dcf709d166fb2c6b5c31e6 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 9.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4897 ec31727e68dcf709d166fb2c6b5c31e6 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 9.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4897 ec31727e68dcf709d166fb2c6b5c31e6 151 SMART SM00347 34 134 2.6E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2912 04daa582b0367d96dfb79cafed4807c1 141 Gene3D G3DSA:3.40.50.2300 8 141 2.5E-29 T 14-10-2018 Amir_2912 04daa582b0367d96dfb79cafed4807c1 141 Pfam PF00072 Response regulator receiver domain 14 127 4.9E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2912 04daa582b0367d96dfb79cafed4807c1 141 SMART SM00448 11 129 1.9E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2912 04daa582b0367d96dfb79cafed4807c1 141 SUPERFAMILY SSF52172 13 137 6.26E-27 T 14-10-2018 IPR011006 CheY-like superfamily Amir_0855 5b9879b2051663f599cea3dfd35a0009 247 Pfam PF00106 short chain dehydrogenase 6 209 1.7E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0855 5b9879b2051663f599cea3dfd35a0009 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.6E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0855 5b9879b2051663f599cea3dfd35a0009 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 189 1.6E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0855 5b9879b2051663f599cea3dfd35a0009 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 1.6E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0855 5b9879b2051663f599cea3dfd35a0009 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.6E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0855 5b9879b2051663f599cea3dfd35a0009 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.6E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0855 5b9879b2051663f599cea3dfd35a0009 247 Gene3D G3DSA:3.40.50.720 1 247 5.2E-66 T 14-10-2018 Amir_0855 5b9879b2051663f599cea3dfd35a0009 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0855 5b9879b2051663f599cea3dfd35a0009 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 170 189 1.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0855 5b9879b2051663f599cea3dfd35a0009 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0855 5b9879b2051663f599cea3dfd35a0009 247 SUPERFAMILY SSF51735 4 240 9.11E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6166 97bf1f3a651eae2443c1c10ef9059643 1036 SMART SM00382 299 447 1.4E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6166 97bf1f3a651eae2443c1c10ef9059643 1036 Pfam PF03704 Bacterial transcriptional activator domain 101 242 3.6E-33 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_6166 97bf1f3a651eae2443c1c10ef9059643 1036 Gene3D G3DSA:3.40.50.300 277 442 8.9E-11 T 14-10-2018 Amir_6166 97bf1f3a651eae2443c1c10ef9059643 1036 SUPERFAMILY SSF52540 265 485 2.67E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6166 97bf1f3a651eae2443c1c10ef9059643 1036 Gene3D G3DSA:1.10.10.10 1 98 2.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6166 97bf1f3a651eae2443c1c10ef9059643 1036 SUPERFAMILY SSF48452 100 264 4.74E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6166 97bf1f3a651eae2443c1c10ef9059643 1036 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 96 1.5E-6 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_6166 97bf1f3a651eae2443c1c10ef9059643 1036 SUPERFAMILY SSF46894 2 96 2.83E-12 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_6166 97bf1f3a651eae2443c1c10ef9059643 1036 SMART SM01043 101 242 2.0E-45 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_6166 97bf1f3a651eae2443c1c10ef9059643 1036 SMART SM00862 18 96 1.5E-6 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_6166 97bf1f3a651eae2443c1c10ef9059643 1036 Gene3D G3DSA:1.25.40.10 99 262 4.4E-42 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6166 97bf1f3a651eae2443c1c10ef9059643 1036 Pfam PF13191 AAA ATPase domain 276 405 3.6E-17 T 14-10-2018 Amir_5643 c00801bdf4bb38453029777213ffeecd 335 SUPERFAMILY SSF51445 2 204 2.88E-32 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_5643 c00801bdf4bb38453029777213ffeecd 335 Pfam PF01183 Glycosyl hydrolases family 25 5 164 8.1E-19 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 Amir_5643 c00801bdf4bb38453029777213ffeecd 335 Gene3D G3DSA:3.20.20.80 1 206 8.7E-35 T 14-10-2018 Amir_5643 c00801bdf4bb38453029777213ffeecd 335 SMART SM00641 2 104 2.2E-9 T 14-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup Amir_1458 dcb696fa9d9044a7996811bb3c2cf561 410 Gene3D G3DSA:3.90.110.10 157 408 3.9E-64 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Amir_1458 dcb696fa9d9044a7996811bb3c2cf561 410 SUPERFAMILY SSF51735 3 166 3.63E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1458 dcb696fa9d9044a7996811bb3c2cf561 410 PRINTS PR00732 Glycosyl hydrolase family 4 signature 153 164 2.1E-25 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amir_1458 dcb696fa9d9044a7996811bb3c2cf561 410 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 119 2.1E-25 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amir_1458 dcb696fa9d9044a7996811bb3c2cf561 410 PRINTS PR00732 Glycosyl hydrolase family 4 signature 85 98 2.1E-25 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amir_1458 dcb696fa9d9044a7996811bb3c2cf561 410 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 2.1E-25 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amir_1458 dcb696fa9d9044a7996811bb3c2cf561 410 PRINTS PR00732 Glycosyl hydrolase family 4 signature 128 145 2.1E-25 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amir_1458 dcb696fa9d9044a7996811bb3c2cf561 410 Pfam PF02056 Family 4 glycosyl hydrolase 28 173 2.3E-37 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amir_1458 dcb696fa9d9044a7996811bb3c2cf561 410 Gene3D G3DSA:3.40.50.720 2 156 3.0E-46 T 14-10-2018 Amir_1458 dcb696fa9d9044a7996811bb3c2cf561 410 SUPERFAMILY SSF56327 157 405 4.68E-51 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Amir_1458 dcb696fa9d9044a7996811bb3c2cf561 410 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 128 158 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 Amir_1458 dcb696fa9d9044a7996811bb3c2cf561 410 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 181 386 2.5E-37 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 Amir_5772 5fe270661e4a14bb686325817f8f183d 635 Pfam PF00905 Penicillin binding protein transpeptidase domain 301 611 4.6E-80 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Amir_5772 5fe270661e4a14bb686325817f8f183d 635 SUPERFAMILY SSF56519 76 273 6.93E-26 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Amir_5772 5fe270661e4a14bb686325817f8f183d 635 SUPERFAMILY SSF56601 275 621 8.37E-88 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_5772 5fe270661e4a14bb686325817f8f183d 635 Pfam PF03717 Penicillin-binding Protein dimerisation domain 77 247 5.8E-13 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Amir_5772 5fe270661e4a14bb686325817f8f183d 635 Gene3D G3DSA:3.40.710.10 336 529 7.7E-102 T 14-10-2018 Amir_5772 5fe270661e4a14bb686325817f8f183d 635 Gene3D G3DSA:3.90.1310.30 71 274 1.0E-27 T 14-10-2018 Amir_5772 5fe270661e4a14bb686325817f8f183d 635 Gene3D G3DSA:3.30.450.330 276 615 7.7E-102 T 14-10-2018 Amir_1035 021f668335db88916934d00fde5b7c04 159 SMART SM00530 15 72 1.1E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_1035 021f668335db88916934d00fde5b7c04 159 SUPERFAMILY SSF47413 7 73 1.07E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1035 021f668335db88916934d00fde5b7c04 159 Gene3D G3DSA:1.10.260.40 5 74 4.5E-14 T 14-10-2018 Amir_1035 021f668335db88916934d00fde5b7c04 159 Pfam PF13560 Helix-turn-helix domain 12 70 3.0E-9 T 14-10-2018 Amir_6252 da85e596583a6d66914d43068468d4ed 1436 SUPERFAMILY SSF52540 368 608 5.76E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6252 da85e596583a6d66914d43068468d4ed 1436 Gene3D G3DSA:1.20.1560.10 814 1137 2.9E-82 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_6252 da85e596583a6d66914d43068468d4ed 1436 Gene3D G3DSA:1.20.1560.10 25 360 1.8E-67 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_6252 da85e596583a6d66914d43068468d4ed 1436 Gene3D G3DSA:3.40.50.300 374 617 1.2E-79 T 14-10-2018 Amir_6252 da85e596583a6d66914d43068468d4ed 1436 Pfam PF00005 ABC transporter 392 541 9.0E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6252 da85e596583a6d66914d43068468d4ed 1436 Gene3D G3DSA:3.40.50.300 1142 1390 3.9E-84 T 14-10-2018 Amir_6252 da85e596583a6d66914d43068468d4ed 1436 Pfam PF00005 ABC transporter 1170 1319 1.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6252 da85e596583a6d66914d43068468d4ed 1436 ProSitePatterns PS00211 ABC transporters family signature. 513 527 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_6252 da85e596583a6d66914d43068468d4ed 1436 SUPERFAMILY SSF52540 1144 1387 1.44E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6252 da85e596583a6d66914d43068468d4ed 1436 SMART SM00382 401 587 3.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6252 da85e596583a6d66914d43068468d4ed 1436 SMART SM00382 1179 1365 1.2E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6252 da85e596583a6d66914d43068468d4ed 1436 SUPERFAMILY SSF90123 821 1138 3.27E-76 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_6252 da85e596583a6d66914d43068468d4ed 1436 SUPERFAMILY SSF90123 48 355 9.03E-63 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_6252 da85e596583a6d66914d43068468d4ed 1436 Pfam PF00664 ABC transporter transmembrane region 64 329 2.8E-35 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_6252 da85e596583a6d66914d43068468d4ed 1436 Pfam PF00664 ABC transporter transmembrane region 838 1107 1.5E-39 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 866 2.1E-244 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 887 163.676 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 SMART SM00863 660 704 1.5E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 660 704 6.6E-14 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 SUPERFAMILY SSF55186 559 719 8.89E-40 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 Gene3D G3DSA:2.40.30.130 478 559 2.3E-12 T 14-10-2018 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 SUPERFAMILY SSF55681 2 248 1.66E-88 T 14-10-2018 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 Gene3D G3DSA:3.30.54.20 631 685 9.9E-36 T 14-10-2018 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 SUPERFAMILY SSF101353 249 464 7.45E-55 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 Gene3D G3DSA:3.30.930.10 1 245 8.5E-92 T 14-10-2018 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 Gene3D G3DSA:3.10.310.40 775 883 1.6E-20 T 14-10-2018 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 SUPERFAMILY SSF50447 460 559 9.19E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 Pfam PF01411 tRNA synthetases class II (A) 5 562 8.0E-194 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 Gene3D G3DSA:3.30.980.10 571 705 9.9E-36 T 14-10-2018 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 PRINTS PR00980 Alanyl-tRNA synthetase signature 303 316 4.4E-26 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 PRINTS PR00980 Alanyl-tRNA synthetase signature 279 295 4.4E-26 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 PRINTS PR00980 Alanyl-tRNA synthetase signature 229 242 4.4E-26 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 PRINTS PR00980 Alanyl-tRNA synthetase signature 196 207 4.4E-26 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 PRINTS PR00980 Alanyl-tRNA synthetase signature 69 80 4.4E-26 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Amir_5265 6272232ca0694c7042eb86c8cbbb8fa8 890 Pfam PF02272 DHHA1 domain 740 881 1.6E-20 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Amir_2895 0948678a5fe3e8741aba17914cbf03b9 401 Gene3D G3DSA:1.10.630.10 4 401 5.5E-120 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2895 0948678a5fe3e8741aba17914cbf03b9 401 SUPERFAMILY SSF48264 14 401 1.57E-88 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2895 0948678a5fe3e8741aba17914cbf03b9 401 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 343 352 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_2895 0948678a5fe3e8741aba17914cbf03b9 401 PRINTS PR00385 P450 superfamily signature 341 350 2.5E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2895 0948678a5fe3e8741aba17914cbf03b9 401 PRINTS PR00385 P450 superfamily signature 350 361 2.5E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2895 0948678a5fe3e8741aba17914cbf03b9 401 PRINTS PR00385 P450 superfamily signature 239 256 2.5E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2895 0948678a5fe3e8741aba17914cbf03b9 401 PRINTS PR00385 P450 superfamily signature 274 285 2.5E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2895 0948678a5fe3e8741aba17914cbf03b9 401 PRINTS PR00359 B-class P450 signature 320 335 3.3E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2895 0948678a5fe3e8741aba17914cbf03b9 401 PRINTS PR00359 B-class P450 signature 341 350 3.3E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2895 0948678a5fe3e8741aba17914cbf03b9 401 PRINTS PR00359 B-class P450 signature 292 319 3.3E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2895 0948678a5fe3e8741aba17914cbf03b9 401 PRINTS PR00359 B-class P450 signature 350 361 3.3E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2895 0948678a5fe3e8741aba17914cbf03b9 401 PRINTS PR00359 B-class P450 signature 137 153 3.3E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2895 0948678a5fe3e8741aba17914cbf03b9 401 PRINTS PR00359 B-class P450 signature 154 169 3.3E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2895 0948678a5fe3e8741aba17914cbf03b9 401 PRINTS PR00359 B-class P450 signature 192 214 3.3E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2895 0948678a5fe3e8741aba17914cbf03b9 401 PRINTS PR00359 B-class P450 signature 274 285 3.3E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2895 0948678a5fe3e8741aba17914cbf03b9 401 Pfam PF00067 Cytochrome P450 186 370 1.3E-20 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_6719 1ad50ec208501807ac64007fb29b6509 431 Pfam PF00202 Aminotransferase class-III 35 418 1.1E-84 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_6719 1ad50ec208501807ac64007fb29b6509 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 422 6.6E-180 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Amir_6719 1ad50ec208501807ac64007fb29b6509 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_6719 1ad50ec208501807ac64007fb29b6509 431 Gene3D G3DSA:3.40.640.10 71 318 2.5E-159 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_6719 1ad50ec208501807ac64007fb29b6509 431 SUPERFAMILY SSF53383 4 422 5.84E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_6719 1ad50ec208501807ac64007fb29b6509 431 Gene3D G3DSA:3.90.1150.10 9 419 2.5E-159 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_6719 1ad50ec208501807ac64007fb29b6509 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 426 96.563 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Amir_5533 e80d1eb3e1c0fc87f1f5caaa6f34643d 136 Pfam PF03061 Thioesterase superfamily 48 124 6.2E-17 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Amir_5533 e80d1eb3e1c0fc87f1f5caaa6f34643d 136 Gene3D G3DSA:3.10.129.10 2 136 2.2E-45 T 14-10-2018 Amir_5533 e80d1eb3e1c0fc87f1f5caaa6f34643d 136 SUPERFAMILY SSF54637 1 132 4.64E-30 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_5533 e80d1eb3e1c0fc87f1f5caaa6f34643d 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 131 3.8E-30 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 Amir_2278 7f51a3800bb0234285f1751494726397 247 Gene3D G3DSA:1.25.40.10 174 246 1.9E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2278 7f51a3800bb0234285f1751494726397 247 SUPERFAMILY SSF48452 137 241 1.01E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2278 7f51a3800bb0234285f1751494726397 247 Pfam PF07721 Tetratricopeptide repeat 140 164 0.022 T 14-10-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 Amir_2278 7f51a3800bb0234285f1751494726397 247 Gene3D G3DSA:1.25.40.10 28 117 6.6E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2278 7f51a3800bb0234285f1751494726397 247 Gene3D G3DSA:1.25.40.10 118 170 2.6E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2278 7f51a3800bb0234285f1751494726397 247 Pfam PF13432 Tetratricopeptide repeat 41 91 0.0015 T 14-10-2018 Amir_2278 7f51a3800bb0234285f1751494726397 247 Pfam PF13432 Tetratricopeptide repeat 98 136 7.3E-6 T 14-10-2018 Amir_2278 7f51a3800bb0234285f1751494726397 247 Pfam PF13432 Tetratricopeptide repeat 198 244 2.3E-6 T 14-10-2018 Amir_2278 7f51a3800bb0234285f1751494726397 247 SMART SM00028 217 247 210.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2278 7f51a3800bb0234285f1751494726397 247 SMART SM00028 37 70 22.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2278 7f51a3800bb0234285f1751494726397 247 SMART SM00028 139 172 22.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2278 7f51a3800bb0234285f1751494726397 247 SMART SM00028 105 138 0.0051 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2278 7f51a3800bb0234285f1751494726397 247 SMART SM00028 71 104 0.0056 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_2278 7f51a3800bb0234285f1751494726397 247 SUPERFAMILY SSF48452 34 169 7.59E-29 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6641 c7c515e04d6fbf53fa3deef918be1900 266 ProSitePatterns PS01014 Transcription termination factor nusG signature. 249 258 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Amir_6641 c7c515e04d6fbf53fa3deef918be1900 266 Pfam PF02357 Transcription termination factor nusG 83 185 1.0E-25 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amir_6641 c7c515e04d6fbf53fa3deef918be1900 266 PRINTS PR00338 Transcription termination factor NUSG signature 224 239 5.7E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Amir_6641 c7c515e04d6fbf53fa3deef918be1900 266 PRINTS PR00338 Transcription termination factor NUSG signature 242 258 5.7E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Amir_6641 c7c515e04d6fbf53fa3deef918be1900 266 PRINTS PR00338 Transcription termination factor NUSG signature 136 148 5.7E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Amir_6641 c7c515e04d6fbf53fa3deef918be1900 266 SUPERFAMILY SSF82679 83 187 1.7E-37 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amir_6641 c7c515e04d6fbf53fa3deef918be1900 266 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 84 266 1.5E-65 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Amir_6641 c7c515e04d6fbf53fa3deef918be1900 266 Gene3D G3DSA:2.30.30.30 205 266 3.1E-25 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Amir_6641 c7c515e04d6fbf53fa3deef918be1900 266 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 81 266 24.121 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Amir_6641 c7c515e04d6fbf53fa3deef918be1900 266 SMART SM00738 81 189 4.0E-51 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amir_6641 c7c515e04d6fbf53fa3deef918be1900 266 Gene3D G3DSA:3.30.70.940 78 195 1.1E-41 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amir_6641 c7c515e04d6fbf53fa3deef918be1900 266 SUPERFAMILY SSF50104 210 266 5.31E-17 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Amir_6641 c7c515e04d6fbf53fa3deef918be1900 266 SMART SM00739 212 239 0.0084 T 14-10-2018 IPR005824 KOW Amir_5514 bd56afc69c4edb12ea74a4804cc6dfbb 968 ProSitePatterns PS00211 ABC transporters family signature. 803 817 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_5514 bd56afc69c4edb12ea74a4804cc6dfbb 968 SMART SM00382 699 880 1.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5514 bd56afc69c4edb12ea74a4804cc6dfbb 968 Pfam PF00005 ABC transporter 691 831 9.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5514 bd56afc69c4edb12ea74a4804cc6dfbb 968 SUPERFAMILY SSF49785 469 624 2.76E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5514 bd56afc69c4edb12ea74a4804cc6dfbb 968 SMART SM00939 390 634 7.6E-6 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 Amir_5514 bd56afc69c4edb12ea74a4804cc6dfbb 968 SUPERFAMILY SSF52540 668 893 6.09E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5514 bd56afc69c4edb12ea74a4804cc6dfbb 968 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 59 348 1.2E-17 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 Amir_5514 bd56afc69c4edb12ea74a4804cc6dfbb 968 Gene3D G3DSA:2.60.120.260 424 633 6.3E-13 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5514 bd56afc69c4edb12ea74a4804cc6dfbb 968 Gene3D G3DSA:3.40.50.300 668 899 3.2E-58 T 14-10-2018 Amir_5514 bd56afc69c4edb12ea74a4804cc6dfbb 968 SUPERFAMILY SSF53474 58 399 7.28E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5526 44fdff9c424000f2212d3c61cdceaf57 631 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 414 617 3.0E-63 T 14-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal Amir_5526 44fdff9c424000f2212d3c61cdceaf57 631 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 352 378 1.5E-5 T 14-10-2018 IPR023908 xxxLxxG heptad repeat Amir_5526 44fdff9c424000f2212d3c61cdceaf57 631 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 206 229 2.0E-7 T 14-10-2018 IPR023908 xxxLxxG heptad repeat Amir_5526 44fdff9c424000f2212d3c61cdceaf57 631 Pfam PF12698 ABC-2 family transporter protein 426 611 1.8E-9 T 14-10-2018 Amir_5526 44fdff9c424000f2212d3c61cdceaf57 631 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 9 171 2.7E-48 T 14-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal Amir_5526 44fdff9c424000f2212d3c61cdceaf57 631 SUPERFAMILY SSF58104 193 391 3.92E-7 T 14-10-2018 Amir_5526 44fdff9c424000f2212d3c61cdceaf57 631 Gene3D G3DSA:1.10.287.950 175 339 5.7E-6 T 14-10-2018 Amir_2371 4663a1dd07db909e0c55c6f52a709936 382 Gene3D G3DSA:1.10.3210.10 138 249 1.2E-6 T 14-10-2018 Amir_2371 4663a1dd07db909e0c55c6f52a709936 382 Pfam PF00072 Response regulator receiver domain 6 120 5.0E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2371 4663a1dd07db909e0c55c6f52a709936 382 SUPERFAMILY SSF52172 1 140 9.25E-24 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2371 4663a1dd07db909e0c55c6f52a709936 382 Gene3D G3DSA:3.40.50.2300 1 137 4.2E-24 T 14-10-2018 Amir_2371 4663a1dd07db909e0c55c6f52a709936 382 SMART SM00448 4 120 8.1E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6321 3540f4ddc54887357962078f5bd4cf54 490 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 248 410 1.6E-79 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Amir_6321 3540f4ddc54887357962078f5bd4cf54 490 SMART SM00997 248 410 2.4E-106 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Amir_6321 3540f4ddc54887357962078f5bd4cf54 490 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 270 286 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Amir_6321 3540f4ddc54887357962078f5bd4cf54 490 PIRSF PIRSF001109 6 490 5.9E-189 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Amir_6321 3540f4ddc54887357962078f5bd4cf54 490 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 88 102 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Amir_6321 3540f4ddc54887357962078f5bd4cf54 490 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 16 489 1.2E-144 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Amir_6321 3540f4ddc54887357962078f5bd4cf54 490 Gene3D G3DSA:3.40.50.1480 19 490 2.1E-236 T 14-10-2018 Amir_6321 3540f4ddc54887357962078f5bd4cf54 490 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 17 482 4.3E-190 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Amir_6321 3540f4ddc54887357962078f5bd4cf54 490 SMART SM00996 16 489 0.0 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Amir_6321 3540f4ddc54887357962078f5bd4cf54 490 Gene3D G3DSA:3.40.50.720 251 411 2.1E-236 T 14-10-2018 Amir_6321 3540f4ddc54887357962078f5bd4cf54 490 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 12 482 48.164 T 14-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 Amir_6321 3540f4ddc54887357962078f5bd4cf54 490 SUPERFAMILY SSF51735 248 410 2.05E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6321 3540f4ddc54887357962078f5bd4cf54 490 SUPERFAMILY SSF52283 15 490 6.23E-111 T 14-10-2018 Amir_4088 21446615d7ce1958ec0e87b2f4a5bb42 309 Gene3D G3DSA:3.40.50.1820 36 308 4.8E-72 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4088 21446615d7ce1958ec0e87b2f4a5bb42 309 PRINTS PR00412 Epoxide hydrolase signature 127 140 4.8E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4088 21446615d7ce1958ec0e87b2f4a5bb42 309 PRINTS PR00412 Epoxide hydrolase signature 64 82 4.8E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4088 21446615d7ce1958ec0e87b2f4a5bb42 309 PRINTS PR00412 Epoxide hydrolase signature 284 306 4.8E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4088 21446615d7ce1958ec0e87b2f4a5bb42 309 Pfam PF12697 Alpha/beta hydrolase family 60 301 4.0E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4088 21446615d7ce1958ec0e87b2f4a5bb42 309 SUPERFAMILY SSF53474 36 306 4.43E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_7039 1f50313721dbc91e3e1abc42a444547e 118 Pfam PF01250 Ribosomal protein S6 6 95 2.1E-23 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7039 1f50313721dbc91e3e1abc42a444547e 118 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 4 98 19.832 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Amir_7039 1f50313721dbc91e3e1abc42a444547e 118 TIGRFAM TIGR00166 S6: ribosomal protein bS6 4 97 2.0E-21 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7039 1f50313721dbc91e3e1abc42a444547e 118 Gene3D G3DSA:3.30.70.60 4 104 1.1E-27 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Amir_7039 1f50313721dbc91e3e1abc42a444547e 118 SUPERFAMILY SSF54995 2 99 3.4E-29 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_4302 fcf7fc30acb5f4fb797bce936971125c 281 Pfam PF01936 NYN domain 6 147 3.3E-12 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type Amir_4302 fcf7fc30acb5f4fb797bce936971125c 281 Gene3D G3DSA:3.40.50.1010 55 152 1.2E-5 T 14-10-2018 Amir_4636 537ee14ffebf555048ec7fd487fb79c1 320 SUPERFAMILY SSF55781 33 172 8.5E-6 T 14-10-2018 Amir_4636 537ee14ffebf555048ec7fd487fb79c1 320 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 261 275 2.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4636 537ee14ffebf555048ec7fd487fb79c1 320 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 291 303 2.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4636 537ee14ffebf555048ec7fd487fb79c1 320 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 275 291 2.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4636 537ee14ffebf555048ec7fd487fb79c1 320 Gene3D G3DSA:1.10.10.10 235 317 3.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4636 537ee14ffebf555048ec7fd487fb79c1 320 SMART SM00421 258 315 1.8E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4636 537ee14ffebf555048ec7fd487fb79c1 320 SUPERFAMILY SSF46894 246 317 1.16E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4636 537ee14ffebf555048ec7fd487fb79c1 320 Gene3D G3DSA:3.30.450.40 12 180 2.8E-5 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_4636 537ee14ffebf555048ec7fd487fb79c1 320 Pfam PF00196 Bacterial regulatory proteins, luxR family 260 312 4.5E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5399 a2cf4365cf898541c5c6fdcb2b07826b 243 Pfam PF04542 Sigma-70 region 2 31 100 1.6E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5399 a2cf4365cf898541c5c6fdcb2b07826b 243 Pfam PF04545 Sigma-70, region 4 190 238 2.3E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amir_5399 a2cf4365cf898541c5c6fdcb2b07826b 243 Gene3D G3DSA:1.10.10.10 164 242 2.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5399 a2cf4365cf898541c5c6fdcb2b07826b 243 SUPERFAMILY SSF88659 174 241 1.55E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5399 a2cf4365cf898541c5c6fdcb2b07826b 243 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 25 239 3.1E-76 T 14-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_5399 a2cf4365cf898541c5c6fdcb2b07826b 243 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 239 8.0E-32 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_5399 a2cf4365cf898541c5c6fdcb2b07826b 243 Pfam PF04539 Sigma-70 region 3 114 169 2.6E-8 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Amir_5399 a2cf4365cf898541c5c6fdcb2b07826b 243 Gene3D G3DSA:1.10.10.10 101 153 2.0E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5399 a2cf4365cf898541c5c6fdcb2b07826b 243 PRINTS PR00046 Major sigma-70 factor signature 210 225 1.1E-6 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_5399 a2cf4365cf898541c5c6fdcb2b07826b 243 PRINTS PR00046 Major sigma-70 factor signature 55 68 1.1E-6 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_5399 a2cf4365cf898541c5c6fdcb2b07826b 243 PRINTS PR00046 Major sigma-70 factor signature 225 236 1.1E-6 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_5399 a2cf4365cf898541c5c6fdcb2b07826b 243 PRINTS PR00046 Major sigma-70 factor signature 193 205 1.1E-6 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_5399 a2cf4365cf898541c5c6fdcb2b07826b 243 Gene3D G3DSA:1.20.120.1810 3 99 4.9E-18 T 14-10-2018 Amir_5399 a2cf4365cf898541c5c6fdcb2b07826b 243 SUPERFAMILY SSF88946 9 100 9.68E-27 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5399 a2cf4365cf898541c5c6fdcb2b07826b 243 SUPERFAMILY SSF88659 104 167 4.8E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_6846 4e488b236b954137305d959b8956a8c6 616 Gene3D G3DSA:3.40.50.970 389 581 2.0E-27 T 14-10-2018 Amir_6846 4e488b236b954137305d959b8956a8c6 616 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 434 572 4.6E-22 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amir_6846 4e488b236b954137305d959b8956a8c6 616 Gene3D G3DSA:3.40.50.1220 214 382 4.6E-36 T 14-10-2018 Amir_6846 4e488b236b954137305d959b8956a8c6 616 Gene3D G3DSA:3.40.50.970 1 201 6.7E-28 T 14-10-2018 Amir_6846 4e488b236b954137305d959b8956a8c6 616 SUPERFAMILY SSF52518 1 208 3.09E-28 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_6846 4e488b236b954137305d959b8956a8c6 616 SUPERFAMILY SSF52518 391 580 2.76E-29 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_6846 4e488b236b954137305d959b8956a8c6 616 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 218 350 2.1E-30 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Amir_6846 4e488b236b954137305d959b8956a8c6 616 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 2 593 1.2E-223 T 14-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 Amir_6846 4e488b236b954137305d959b8956a8c6 616 SUPERFAMILY SSF52467 179 378 7.41E-40 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amir_6846 4e488b236b954137305d959b8956a8c6 616 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 194 1.1E-34 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Amir_6507 ab4575fa4893efad719228ddea37b27e 296 Pfam PF02629 CoA binding domain 6 103 1.1E-25 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Amir_6507 ab4575fa4893efad719228ddea37b27e 296 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 292 39.523 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Amir_6507 ab4575fa4893efad719228ddea37b27e 296 SUPERFAMILY SSF51735 1 128 7.19E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6507 ab4575fa4893efad719228ddea37b27e 296 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 240 253 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Amir_6507 ab4575fa4893efad719228ddea37b27e 296 PIRSF PIRSF001553 1 295 4.9E-115 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Amir_6507 ab4575fa4893efad719228ddea37b27e 296 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 158 185 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Amir_6507 ab4575fa4893efad719228ddea37b27e 296 SMART SM00881 4 104 8.7E-31 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Amir_6507 ab4575fa4893efad719228ddea37b27e 296 Pfam PF00549 CoA-ligase 158 275 1.6E-14 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amir_6507 ab4575fa4893efad719228ddea37b27e 296 SUPERFAMILY SSF52210 129 290 6.54E-45 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amir_6507 ab4575fa4893efad719228ddea37b27e 296 Gene3D G3DSA:3.40.50.261 130 293 1.1E-60 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amir_6507 ab4575fa4893efad719228ddea37b27e 296 PRINTS PR01798 Succinyl-CoA synthase signature 181 199 2.3E-34 T 14-10-2018 Amir_6507 ab4575fa4893efad719228ddea37b27e 296 PRINTS PR01798 Succinyl-CoA synthase signature 86 103 2.3E-34 T 14-10-2018 Amir_6507 ab4575fa4893efad719228ddea37b27e 296 PRINTS PR01798 Succinyl-CoA synthase signature 212 225 2.3E-34 T 14-10-2018 Amir_6507 ab4575fa4893efad719228ddea37b27e 296 PRINTS PR01798 Succinyl-CoA synthase signature 244 261 2.3E-34 T 14-10-2018 Amir_6507 ab4575fa4893efad719228ddea37b27e 296 Gene3D G3DSA:3.40.50.720 1 129 2.5E-46 T 14-10-2018 Amir_6507 ab4575fa4893efad719228ddea37b27e 296 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 291 4.1E-125 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Amir_2969 ef0082d0160db5c1a91aac68831bc6d8 172 Gene3D G3DSA:3.30.565.10 19 153 1.7E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2969 ef0082d0160db5c1a91aac68831bc6d8 172 SUPERFAMILY SSF55874 61 141 5.55E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2969 ef0082d0160db5c1a91aac68831bc6d8 172 Pfam PF07730 Histidine kinase 34 90 4.0E-6 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_3911 90201cb3c2b45da3999ecdcf02e272af 289 Pfam PF01032 FecCD transport family 3 281 1.2E-82 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_3911 90201cb3c2b45da3999ecdcf02e272af 289 Gene3D G3DSA:1.10.3470.10 1 288 4.7E-87 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_3911 90201cb3c2b45da3999ecdcf02e272af 289 SUPERFAMILY SSF81345 3 282 4.97E-70 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_3021 9e0a11d647ff4cd1f7a37abf9f3ef598 1314 SMART SM00773 4 71 2.4E-13 T 14-10-2018 IPR008893 WGR domain Amir_3021 9e0a11d647ff4cd1f7a37abf9f3ef598 1314 Pfam PF05406 WGR domain 8 66 8.7E-16 T 14-10-2018 IPR008893 WGR domain Amir_3021 9e0a11d647ff4cd1f7a37abf9f3ef598 1314 Gene3D G3DSA:2.20.140.10 2 70 2.1E-21 T 14-10-2018 IPR036930 WGR domain superfamily Amir_3021 9e0a11d647ff4cd1f7a37abf9f3ef598 1314 Pfam PF13569 Domain of unknown function (DUF4132) 1042 1225 1.3E-44 T 14-10-2018 IPR025406 Domain of unknown function DUF4132 Amir_3021 9e0a11d647ff4cd1f7a37abf9f3ef598 1314 SUPERFAMILY SSF142921 23 67 6.67E-10 T 14-10-2018 IPR036930 WGR domain superfamily Amir_6498 668815723086b40dc9ecc657db3a2312 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 6 285 35.691 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_6498 668815723086b40dc9ecc657db3a2312 288 Gene3D G3DSA:3.40.50.10860 11 279 5.9E-107 T 14-10-2018 Amir_6498 668815723086b40dc9ecc657db3a2312 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 9 121 2.3E-33 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_6498 668815723086b40dc9ecc657db3a2312 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 36 58 2.2E-63 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_6498 668815723086b40dc9ecc657db3a2312 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 77 104 2.2E-63 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_6498 668815723086b40dc9ecc657db3a2312 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 258 276 2.2E-63 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_6498 668815723086b40dc9ecc657db3a2312 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 208 237 2.2E-63 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_6498 668815723086b40dc9ecc657db3a2312 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 112 133 2.2E-63 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_6498 668815723086b40dc9ecc657db3a2312 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 157 177 2.2E-63 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_6498 668815723086b40dc9ecc657db3a2312 288 SUPERFAMILY SSF51735 125 284 5.99E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6498 668815723086b40dc9ecc657db3a2312 288 SUPERFAMILY SSF53223 5 124 2.59E-34 T 14-10-2018 Amir_6498 668815723086b40dc9ecc657db3a2312 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 126 283 2.6E-59 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_6498 668815723086b40dc9ecc657db3a2312 288 Gene3D G3DSA:3.40.50.720 9 261 5.9E-107 T 14-10-2018 Amir_4453 5e5789ef5910df31fd4b70dedbb93202 443 PRINTS PR00757 Flavin-containing amine oxidase signature 19 38 2.4E-9 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Amir_4453 5e5789ef5910df31fd4b70dedbb93202 443 PRINTS PR00757 Flavin-containing amine oxidase signature 420 437 2.4E-9 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Amir_4453 5e5789ef5910df31fd4b70dedbb93202 443 PRINTS PR00757 Flavin-containing amine oxidase signature 369 388 2.4E-9 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Amir_4453 5e5789ef5910df31fd4b70dedbb93202 443 Gene3D G3DSA:3.50.50.60 19 436 2.6E-106 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4453 5e5789ef5910df31fd4b70dedbb93202 443 Gene3D G3DSA:3.90.660.10 95 381 2.6E-106 T 14-10-2018 Amir_4453 5e5789ef5910df31fd4b70dedbb93202 443 SUPERFAMILY SSF51905 16 439 1.75E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4453 5e5789ef5910df31fd4b70dedbb93202 443 Pfam PF01593 Flavin containing amine oxidoreductase 27 437 1.1E-41 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Amir_4160 05d4ed9ace894920969cd43d973b1fd0 407 Pfam PF02515 CoA-transferase family III 11 384 9.9E-127 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 Amir_4160 05d4ed9ace894920969cd43d973b1fd0 407 Gene3D G3DSA:3.40.50.10540 10 401 2.2E-128 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Amir_4160 05d4ed9ace894920969cd43d973b1fd0 407 Gene3D G3DSA:3.30.1540.10 236 333 2.2E-128 T 14-10-2018 Amir_4160 05d4ed9ace894920969cd43d973b1fd0 407 SUPERFAMILY SSF89796 7 407 2.22E-132 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 Pfam PF00512 His Kinase A (phospho-acceptor) domain 328 391 2.6E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 Gene3D G3DSA:3.40.50.2300 599 737 5.6E-37 T 14-10-2018 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 SUPERFAMILY SSF55781 182 318 6.98E-15 T 14-10-2018 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 Pfam PF13185 GAF domain 176 305 6.3E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 Pfam PF13581 Histidine kinase-like ATPase domain 1250 1365 3.5E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 SMART SM00331 1027 1242 1.1E-33 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 Gene3D G3DSA:3.30.450.20 738 866 1.6E-14 T 14-10-2018 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 Pfam PF00072 Response regulator receiver domain 610 721 1.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 SMART SM00387 437 548 1.8E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 SMART SM00388 327 391 7.8E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 SUPERFAMILY SSF55874 382 546 2.75E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 444 547 4.3E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 Gene3D G3DSA:3.30.450.20 37 162 3.1E-20 T 14-10-2018 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 SMART SM00448 608 721 4.6E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 SUPERFAMILY SSF52172 607 738 5.27E-38 T 14-10-2018 IPR011006 CheY-like superfamily Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 SMART SM00065 177 315 3.4E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 1057 1242 5.0E-43 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 SUPERFAMILY SSF55874 1275 1362 4.45E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 Pfam PF00989 PAS fold 739 852 1.9E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 SUPERFAMILY SSF55785 730 853 1.15E-14 T 14-10-2018 IPR035965 PAS domain superfamily Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 Gene3D G3DSA:3.30.565.10 396 547 7.1E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 545 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 501 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 487 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 526 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 Gene3D G3DSA:3.30.450.40 163 315 1.9E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 SUPERFAMILY SSF47384 312 392 2.35E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 Gene3D G3DSA:3.30.565.10 1244 1370 1.5E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 735 856 7.0E-12 T 14-10-2018 IPR000014 PAS domain Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 SMART SM00091 736 803 0.0047 T 14-10-2018 IPR000014 PAS domain Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 Gene3D G3DSA:3.60.40.10 1030 1242 4.0E-52 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 Pfam PF08448 PAS fold 53 156 2.7E-7 T 14-10-2018 IPR013656 PAS fold-4 Amir_3954 4450828450ad60ce5b57ec9afbb54845 1370 Gene3D G3DSA:1.10.287.130 316 393 8.8E-21 T 14-10-2018 Amir_2720 e49c97cc78675ad2e36fc92e4a93c91f 261 Gene3D G3DSA:3.40.50.300 4 253 1.0E-65 T 14-10-2018 Amir_2720 e49c97cc78675ad2e36fc92e4a93c91f 261 Pfam PF00005 ABC transporter 23 169 3.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2720 e49c97cc78675ad2e36fc92e4a93c91f 261 SMART SM00382 29 225 6.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2720 e49c97cc78675ad2e36fc92e4a93c91f 261 SUPERFAMILY SSF52540 5 230 5.64E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2720 e49c97cc78675ad2e36fc92e4a93c91f 261 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_5483 85f9205f5cb74751530c93594c610585 954 Gene3D G3DSA:1.20.1580.10 93 505 2.7E-260 T 14-10-2018 Amir_5483 85f9205f5cb74751530c93594c610585 954 Gene3D G3DSA:3.40.50.300 8 608 2.7E-260 T 14-10-2018 Amir_5483 85f9205f5cb74751530c93594c610585 954 Gene3D G3DSA:1.10.8.280 294 411 2.7E-260 T 14-10-2018 Amir_5483 85f9205f5cb74751530c93594c610585 954 Pfam PF00005 ABC transporter 636 872 2.2E-8 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5483 85f9205f5cb74751530c93594c610585 954 Gene3D G3DSA:3.40.50.300 629 948 2.8E-143 T 14-10-2018 Amir_5483 85f9205f5cb74751530c93594c610585 954 ProSitePatterns PS00211 ABC transporters family signature. 842 856 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_5483 85f9205f5cb74751530c93594c610585 954 SUPERFAMILY SSF52540 12 582 2.48E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5483 85f9205f5cb74751530c93594c610585 954 SUPERFAMILY SSF52540 627 921 1.33E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5483 85f9205f5cb74751530c93594c610585 954 Hamap MF_00205 UvrABC system protein A [uvrA]. 4 952 22.726 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Amir_5483 85f9205f5cb74751530c93594c610585 954 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 7 937 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Amir_5483 85f9205f5cb74751530c93594c610585 954 Gene3D G3DSA:3.30.190.20 133 246 2.7E-260 T 14-10-2018 Amir_5483 85f9205f5cb74751530c93594c610585 954 Gene3D G3DSA:1.20.1580.10 704 842 2.8E-143 T 14-10-2018 Amir_5483 85f9205f5cb74751530c93594c610585 954 ProSitePatterns PS00211 ABC transporters family signature. 500 514 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_5991 ef45561e778b34e435d3a5c2c2af61e3 456 Gene3D G3DSA:1.10.10.10 7 81 1.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5991 ef45561e778b34e435d3a5c2c2af61e3 456 SMART SM00345 22 81 7.4E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5991 ef45561e778b34e435d3a5c2c2af61e3 456 Gene3D G3DSA:3.40.640.10 91 449 1.0E-79 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_5991 ef45561e778b34e435d3a5c2c2af61e3 456 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 81 1.6E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5991 ef45561e778b34e435d3a5c2c2af61e3 456 SUPERFAMILY SSF53383 76 452 6.93E-66 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_5991 ef45561e778b34e435d3a5c2c2af61e3 456 SUPERFAMILY SSF46785 11 85 2.21E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5991 ef45561e778b34e435d3a5c2c2af61e3 456 Pfam PF00155 Aminotransferase class I and II 136 404 9.3E-11 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_5991 ef45561e778b34e435d3a5c2c2af61e3 456 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 2.6E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5991 ef45561e778b34e435d3a5c2c2af61e3 456 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 2.6E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5998 0d02d1aef98afe4e831e3242855a3188 333 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 180 319 1.2E-48 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amir_5998 0d02d1aef98afe4e831e3242855a3188 333 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 323 36.254 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amir_5998 0d02d1aef98afe4e831e3242855a3188 333 SUPERFAMILY SSF48179 179 332 6.8E-51 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_5998 0d02d1aef98afe4e831e3242855a3188 333 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 188 209 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amir_5998 0d02d1aef98afe4e831e3242855a3188 333 SUPERFAMILY SSF51735 3 179 5.91E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5998 0d02d1aef98afe4e831e3242855a3188 333 Gene3D G3DSA:1.10.1040.10 189 333 1.4E-47 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amir_5998 0d02d1aef98afe4e831e3242855a3188 333 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 159 1.1E-50 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amir_5998 0d02d1aef98afe4e831e3242855a3188 333 PIRSF PIRSF000114 1 333 2.1E-98 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amir_5998 0d02d1aef98afe4e831e3242855a3188 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 238 255 4.8E-45 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amir_5998 0d02d1aef98afe4e831e3242855a3188 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 4.8E-45 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amir_5998 0d02d1aef98afe4e831e3242855a3188 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 173 197 4.8E-45 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amir_5998 0d02d1aef98afe4e831e3242855a3188 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 4.8E-45 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amir_5998 0d02d1aef98afe4e831e3242855a3188 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 198 222 4.8E-45 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amir_5998 0d02d1aef98afe4e831e3242855a3188 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 4.8E-45 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amir_5998 0d02d1aef98afe4e831e3242855a3188 333 Gene3D G3DSA:3.40.50.720 1 187 7.7E-61 T 14-10-2018 Amir_2576 3c6b73c5e1be5585b31dc5698f8fb839 579 Gene3D G3DSA:2.60.120.260 346 476 6.8E-87 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_2576 3c6b73c5e1be5585b31dc5698f8fb839 579 PIRSF PIRSF006336 2 578 1.0E-177 T 14-10-2018 IPR026283 Beta-galactosidase 1-like GO:0004565 Amir_2576 3c6b73c5e1be5585b31dc5698f8fb839 579 Gene3D G3DSA:2.60.120.260 272 558 6.8E-87 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_2576 3c6b73c5e1be5585b31dc5698f8fb839 579 ProSitePatterns PS01182 Glycosyl hydrolases family 35 putative active site. 147 159 - T 14-10-2018 IPR019801 Glycoside hydrolase, family 35, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_2576 3c6b73c5e1be5585b31dc5698f8fb839 579 SUPERFAMILY SSF49785 437 561 3.77E-27 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_2576 3c6b73c5e1be5585b31dc5698f8fb839 579 Pfam PF01301 Glycosyl hydrolases family 35 11 324 1.5E-112 T 14-10-2018 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_2576 3c6b73c5e1be5585b31dc5698f8fb839 579 SUPERFAMILY SSF51445 9 327 7.33E-101 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_2576 3c6b73c5e1be5585b31dc5698f8fb839 579 PRINTS PR00742 Glycosyl hydrolase family 35 signature 293 309 3.7E-57 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_2576 3c6b73c5e1be5585b31dc5698f8fb839 579 PRINTS PR00742 Glycosyl hydrolase family 35 signature 35 53 3.7E-57 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_2576 3c6b73c5e1be5585b31dc5698f8fb839 579 PRINTS PR00742 Glycosyl hydrolase family 35 signature 267 282 3.7E-57 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_2576 3c6b73c5e1be5585b31dc5698f8fb839 579 PRINTS PR00742 Glycosyl hydrolase family 35 signature 90 109 3.7E-57 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_2576 3c6b73c5e1be5585b31dc5698f8fb839 579 PRINTS PR00742 Glycosyl hydrolase family 35 signature 14 31 3.7E-57 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_2576 3c6b73c5e1be5585b31dc5698f8fb839 579 PRINTS PR00742 Glycosyl hydrolase family 35 signature 145 160 3.7E-57 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_2576 3c6b73c5e1be5585b31dc5698f8fb839 579 PRINTS PR00742 Glycosyl hydrolase family 35 signature 231 246 3.7E-57 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_2576 3c6b73c5e1be5585b31dc5698f8fb839 579 PRINTS PR00742 Glycosyl hydrolase family 35 signature 517 533 3.7E-57 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_2576 3c6b73c5e1be5585b31dc5698f8fb839 579 Gene3D G3DSA:3.20.20.80 2 271 1.1E-100 T 14-10-2018 Amir_6915 d0f07bbcb808802f9a8c35c216870bd8 137 Pfam PF11349 Protein of unknown function (DUF3151) 9 132 1.4E-55 T 14-10-2018 IPR014487 Protein of unknown function DUF3151 Amir_6915 d0f07bbcb808802f9a8c35c216870bd8 137 PIRSF PIRSF017349 1 137 4.5E-55 T 14-10-2018 IPR014487 Protein of unknown function DUF3151 Amir_1498 a17f08f46de9dcfbb1cbb117f012a879 300 PRINTS PR00990 Ribokinase signature 218 229 2.2E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_1498 a17f08f46de9dcfbb1cbb117f012a879 300 PRINTS PR00990 Ribokinase signature 181 196 2.2E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_1498 a17f08f46de9dcfbb1cbb117f012a879 300 PRINTS PR00990 Ribokinase signature 36 55 2.2E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_1498 a17f08f46de9dcfbb1cbb117f012a879 300 PRINTS PR00990 Ribokinase signature 107 120 2.2E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_1498 a17f08f46de9dcfbb1cbb117f012a879 300 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 41 65 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Amir_1498 a17f08f46de9dcfbb1cbb117f012a879 300 SUPERFAMILY SSF53613 7 293 7.79E-68 T 14-10-2018 IPR029056 Ribokinase-like Amir_1498 a17f08f46de9dcfbb1cbb117f012a879 300 Gene3D G3DSA:3.40.1190.20 7 298 1.0E-69 T 14-10-2018 IPR029056 Ribokinase-like Amir_1498 a17f08f46de9dcfbb1cbb117f012a879 300 Pfam PF00294 pfkB family carbohydrate kinase 8 293 8.8E-53 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Amir_1498 a17f08f46de9dcfbb1cbb117f012a879 300 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 247 260 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Amir_5262 63e391ad0092c634588f3632c286972a 285 SUPERFAMILY SSF53223 8 107 1.38E-22 T 14-10-2018 Amir_5262 63e391ad0092c634588f3632c286972a 285 Gene3D G3DSA:3.40.50.10860 12 265 3.2E-75 T 14-10-2018 Amir_5262 63e391ad0092c634588f3632c286972a 285 TIGRFAM TIGR01809 Shik-DH-AROM: shikimate-5-dehydrogenase 7 273 1.6E-61 T 14-10-2018 IPR010110 Shikimate dehydrogenase, AroM-type GO:0004764|GO:0005737|GO:0055114 KEGG: 00400+1.1.1.25+4.2.1.10+2.7.1.71+2.5.1.19+4.2.3.4|MetaCyc: PWY-6163|MetaCyc: PWY-6164|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_5262 63e391ad0092c634588f3632c286972a 285 SUPERFAMILY SSF51735 108 276 1.35E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5262 63e391ad0092c634588f3632c286972a 285 Gene3D G3DSA:3.40.50.720 108 251 3.2E-75 T 14-10-2018 Amir_5262 63e391ad0092c634588f3632c286972a 285 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 13 95 6.8E-20 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Amir_1570 402f728a70e93f6702463d020dec4b7a 383 Gene3D G3DSA:2.40.110.10 121 234 2.6E-39 T 14-10-2018 Amir_1570 402f728a70e93f6702463d020dec4b7a 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 117 1.7E-33 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_1570 402f728a70e93f6702463d020dec4b7a 383 Gene3D G3DSA:1.10.540.10 1 120 2.8E-39 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_1570 402f728a70e93f6702463d020dec4b7a 383 PIRSF PIRSF016578 3 380 4.5E-26 T 14-10-2018 Amir_1570 402f728a70e93f6702463d020dec4b7a 383 Gene3D G3DSA:1.20.140.10 235 383 8.2E-59 T 14-10-2018 Amir_1570 402f728a70e93f6702463d020dec4b7a 383 SUPERFAMILY SSF47203 226 378 1.1E-59 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_1570 402f728a70e93f6702463d020dec4b7a 383 SUPERFAMILY SSF56645 2 241 1.96E-79 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_1570 402f728a70e93f6702463d020dec4b7a 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amir_1570 402f728a70e93f6702463d020dec4b7a 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 376 2.7E-53 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_1570 402f728a70e93f6702463d020dec4b7a 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 216 6.3E-28 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amir_4618 f57a0740ec4993b1e8805ee4cabcb5a4 412 SUPERFAMILY SSF103473 11 392 3.92E-30 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4618 f57a0740ec4993b1e8805ee4cabcb5a4 412 Gene3D G3DSA:1.20.1250.20 4 392 2.2E-29 T 14-10-2018 Amir_0470 ad383cf1b5a29e2ee57d35956d71da23 87 Gene3D G3DSA:3.10.20.30 4 87 4.3E-15 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Amir_0470 ad383cf1b5a29e2ee57d35956d71da23 87 SUPERFAMILY SSF54285 3 85 3.92E-10 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Amir_0470 ad383cf1b5a29e2ee57d35956d71da23 87 Pfam PF02597 ThiS family 6 87 7.0E-8 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Amir_3088 193c2805e4e1dd1acfcafd88ee4b7ff5 180 Gene3D G3DSA:1.10.10.10 33 177 1.7E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3088 193c2805e4e1dd1acfcafd88ee4b7ff5 180 Pfam PF12802 MarR family 65 124 3.4E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_3088 193c2805e4e1dd1acfcafd88ee4b7ff5 180 PRINTS PR00598 Bacterial regulatory protein MarR family signature 152 172 8.0E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_3088 193c2805e4e1dd1acfcafd88ee4b7ff5 180 PRINTS PR00598 Bacterial regulatory protein MarR family signature 102 117 8.0E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_3088 193c2805e4e1dd1acfcafd88ee4b7ff5 180 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 137 8.0E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_3088 193c2805e4e1dd1acfcafd88ee4b7ff5 180 SMART SM00347 59 162 3.3E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_3088 193c2805e4e1dd1acfcafd88ee4b7ff5 180 SUPERFAMILY SSF46785 30 174 1.03E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0697 1d935f02f3a93ddde0d555089dd43226 269 PIRSF PIRSF009160 1 269 8.4E-85 T 14-10-2018 IPR010539 Protein of unknown function UCP009160 Amir_0697 1d935f02f3a93ddde0d555089dd43226 269 Pfam PF12811 Bax inhibitor 1 like 41 268 3.7E-87 T 14-10-2018 IPR010539 Protein of unknown function UCP009160 Amir_2565 b32a1f709e9d7880cfd91b70c94b872b 364 Pfam PF01168 Alanine racemase, N-terminal domain 11 227 2.6E-24 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_2565 b32a1f709e9d7880cfd91b70c94b872b 364 Pfam PF14031 Putative serine dehydratase domain 243 349 1.7E-17 T 14-10-2018 IPR026956 D-serine dehydratase-like domain Amir_2565 b32a1f709e9d7880cfd91b70c94b872b 364 SUPERFAMILY SSF51419 11 235 6.87E-27 T 14-10-2018 IPR029066 PLP-binding barrel Amir_2565 b32a1f709e9d7880cfd91b70c94b872b 364 Gene3D G3DSA:2.40.37.20 5 349 1.7E-107 T 14-10-2018 Amir_2565 b32a1f709e9d7880cfd91b70c94b872b 364 Gene3D G3DSA:3.20.20.10 12 225 1.7E-107 T 14-10-2018 IPR029066 PLP-binding barrel Amir_2565 b32a1f709e9d7880cfd91b70c94b872b 364 SMART SM01119 243 350 9.5E-29 T 14-10-2018 IPR026956 D-serine dehydratase-like domain Amir_1469 782616ea999cce2bb897745ff68613b4 902 SUPERFAMILY SSF52210 323 482 4.06E-37 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amir_1469 782616ea999cce2bb897745ff68613b4 902 Gene3D G3DSA:3.30.1490.20 695 765 1.2E-60 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amir_1469 782616ea999cce2bb897745ff68613b4 902 Gene3D G3DSA:3.40.50.720 197 321 4.3E-44 T 14-10-2018 Amir_1469 782616ea999cce2bb897745ff68613b4 902 Gene3D G3DSA:3.30.470.20 679 879 1.2E-60 T 14-10-2018 Amir_1469 782616ea999cce2bb897745ff68613b4 902 Pfam PF13380 CoA binding domain 201 327 1.2E-23 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Amir_1469 782616ea999cce2bb897745ff68613b4 902 Gene3D G3DSA:3.40.630.30 12 196 6.2E-50 T 14-10-2018 Amir_1469 782616ea999cce2bb897745ff68613b4 902 SUPERFAMILY SSF56059 678 876 1.79E-23 T 14-10-2018 Amir_1469 782616ea999cce2bb897745ff68613b4 902 Pfam PF13549 ATP-grasp domain 677 881 2.1E-55 T 14-10-2018 Amir_1469 782616ea999cce2bb897745ff68613b4 902 Gene3D G3DSA:3.40.50.261 323 482 4.6E-52 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amir_1469 782616ea999cce2bb897745ff68613b4 902 Gene3D G3DSA:3.40.50.261 514 649 6.6E-15 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amir_1469 782616ea999cce2bb897745ff68613b4 902 SUPERFAMILY SSF51735 192 328 6.67E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1469 782616ea999cce2bb897745ff68613b4 902 Pfam PF00583 Acetyltransferase (GNAT) family 52 155 3.6E-11 T 14-10-2018 IPR000182 GNAT domain Amir_1469 782616ea999cce2bb897745ff68613b4 902 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 345 478 1.0E-44 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Amir_1469 782616ea999cce2bb897745ff68613b4 902 SUPERFAMILY SSF55729 24 161 4.63E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_1469 782616ea999cce2bb897745ff68613b4 902 SUPERFAMILY SSF52210 485 645 1.83E-17 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amir_1469 782616ea999cce2bb897745ff68613b4 902 SMART SM00881 197 292 3.9E-36 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Amir_6101 e4551919782a437a918dccc688679831 284 SUPERFAMILY SSF54001 16 268 1.02E-42 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amir_6101 e4551919782a437a918dccc688679831 284 Pfam PF00797 N-acetyltransferase 23 261 1.3E-37 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 Amir_6101 e4551919782a437a918dccc688679831 284 Gene3D G3DSA:3.30.2140.10 10 257 2.6E-60 T 14-10-2018 Amir_6101 e4551919782a437a918dccc688679831 284 Gene3D G3DSA:2.40.128.150 85 186 2.6E-60 T 14-10-2018 Amir_6032 ed97ea32e11ecf07ba39f1e34468a726 501 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 17 495 2.6E-138 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Amir_6032 ed97ea32e11ecf07ba39f1e34468a726 501 SUPERFAMILY SSF55931 19 321 6.02E-109 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amir_6032 ed97ea32e11ecf07ba39f1e34468a726 501 SMART SM00845 352 499 2.1E-52 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Amir_6032 ed97ea32e11ecf07ba39f1e34468a726 501 SUPERFAMILY SSF89095 351 497 5.62E-27 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Amir_6032 ed97ea32e11ecf07ba39f1e34468a726 501 Pfam PF02637 GatB domain 352 496 2.4E-37 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Amir_6032 ed97ea32e11ecf07ba39f1e34468a726 501 Gene3D G3DSA:1.10.10.410 439 498 2.5E-15 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Amir_6032 ed97ea32e11ecf07ba39f1e34468a726 501 Gene3D G3DSA:1.10.150.380 322 437 1.3E-17 T 14-10-2018 Amir_6032 ed97ea32e11ecf07ba39f1e34468a726 501 Pfam PF02934 GatB/GatE catalytic domain 20 314 3.4E-102 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 Amir_6032 ed97ea32e11ecf07ba39f1e34468a726 501 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 16 500 35.016 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Amir_6419 07aec0951297724cad84d835c4eee28f 593 Gene3D G3DSA:3.20.20.240 41 462 8.8E-152 T 14-10-2018 Amir_6419 07aec0951297724cad84d835c4eee28f 593 SUPERFAMILY SSF51703 9 500 6.28E-140 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amir_6419 07aec0951297724cad84d835c4eee28f 593 Gene3D G3DSA:3.40.50.280 463 593 4.1E-45 T 14-10-2018 Amir_6419 07aec0951297724cad84d835c4eee28f 593 Pfam PF01642 Methylmalonyl-CoA mutase 43 504 3.5E-118 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amir_4357 e45805fab526178c7e42850a87738ac4 822 SUPERFAMILY SSF51735 607 787 5.12E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4357 e45805fab526178c7e42850a87738ac4 822 Gene3D G3DSA:3.40.366.10 505 549 1.5E-16 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4357 e45805fab526178c7e42850a87738ac4 822 SMART SM00825 Beta-ketoacyl synthase 32 285 1.1E-19 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4357 e45805fab526178c7e42850a87738ac4 822 Gene3D G3DSA:3.40.50.11460 607 792 4.2E-42 T 14-10-2018 Amir_4357 e45805fab526178c7e42850a87738ac4 822 Gene3D G3DSA:3.30.70.3290 304 387 1.1E-51 T 14-10-2018 Amir_4357 e45805fab526178c7e42850a87738ac4 822 Gene3D G3DSA:3.40.47.10 230 288 3.2E-6 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4357 e45805fab526178c7e42850a87738ac4 822 Gene3D G3DSA:3.40.47.10 166 229 6.0E-10 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4357 e45805fab526178c7e42850a87738ac4 822 Gene3D G3DSA:3.40.47.10 12 162 9.2E-32 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4357 e45805fab526178c7e42850a87738ac4 822 SUPERFAMILY SSF52151 388 547 5.49E-27 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4357 e45805fab526178c7e42850a87738ac4 822 Pfam PF08990 Erythronolide synthase docking 3 20 1.3E-6 T 14-10-2018 IPR015083 Polyketide synthase, docking domain GO:0016740|GO:0048037 Amir_4357 e45805fab526178c7e42850a87738ac4 822 SUPERFAMILY SSF53901 27 251 1.67E-31 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4357 e45805fab526178c7e42850a87738ac4 822 Gene3D G3DSA:3.30.70.3290 550 591 1.5E-16 T 14-10-2018 Amir_4357 e45805fab526178c7e42850a87738ac4 822 Gene3D G3DSA:3.40.366.10 388 499 1.1E-51 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4357 e45805fab526178c7e42850a87738ac4 822 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 45 159 1.7E-26 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4357 e45805fab526178c7e42850a87738ac4 822 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 390 706 8.6E-6 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4357 e45805fab526178c7e42850a87738ac4 822 Pfam PF00698 Acyl transferase domain 388 499 8.6E-21 T 14-10-2018 IPR014043 Acyl transferase Amir_4357 e45805fab526178c7e42850a87738ac4 822 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 249 352 1.5E-7 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2372 44a3fa9617de05452a9d22a291d1bfe1 225 Gene3D G3DSA:1.10.10.10 1 74 7.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2372 44a3fa9617de05452a9d22a291d1bfe1 225 SMART SM00895 82 205 3.3E-17 T 14-10-2018 IPR011711 GntR, C-terminal Amir_2372 44a3fa9617de05452a9d22a291d1bfe1 225 SMART SM00345 15 72 5.3E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2372 44a3fa9617de05452a9d22a291d1bfe1 225 SUPERFAMILY SSF48008 78 213 4.45E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_2372 44a3fa9617de05452a9d22a291d1bfe1 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 68 1.3E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2372 44a3fa9617de05452a9d22a291d1bfe1 225 Pfam PF07729 FCD domain 82 204 1.5E-20 T 14-10-2018 IPR011711 GntR, C-terminal Amir_2372 44a3fa9617de05452a9d22a291d1bfe1 225 SUPERFAMILY SSF46785 4 76 5.13E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2372 44a3fa9617de05452a9d22a291d1bfe1 225 Gene3D G3DSA:1.20.120.530 76 218 4.8E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_2923 85d6e8f0fb620333c7d4e0bb3e5d5337 362 SUPERFAMILY SSF46785 5 58 2.33E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2923 85d6e8f0fb620333c7d4e0bb3e5d5337 362 Gene3D G3DSA:3.40.50.2300 184 352 1.6E-56 T 14-10-2018 Amir_2923 85d6e8f0fb620333c7d4e0bb3e5d5337 362 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Amir_2923 85d6e8f0fb620333c7d4e0bb3e5d5337 362 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.9E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_2923 85d6e8f0fb620333c7d4e0bb3e5d5337 362 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.9E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_2923 85d6e8f0fb620333c7d4e0bb3e5d5337 362 Gene3D G3DSA:3.40.50.2300 80 347 1.6E-56 T 14-10-2018 Amir_2923 85d6e8f0fb620333c7d4e0bb3e5d5337 362 SUPERFAMILY SSF53822 80 358 5.81E-40 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_2923 85d6e8f0fb620333c7d4e0bb3e5d5337 362 Pfam PF13377 Periplasmic binding protein-like domain 192 355 3.2E-36 T 14-10-2018 Amir_2923 85d6e8f0fb620333c7d4e0bb3e5d5337 362 SMART SM00420 6 58 6.5E-13 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_2923 85d6e8f0fb620333c7d4e0bb3e5d5337 362 Gene3D G3DSA:1.10.10.10 8 58 6.8E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2923 85d6e8f0fb620333c7d4e0bb3e5d5337 362 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 7.5E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:1.10.1200.10 2813 2901 2.6E-29 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:1.10.1200.10 4447 4535 3.4E-28 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF14765 Polyketide synthase dehydratase 3796 4067 2.8E-41 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF14765 Polyketide synthase dehydratase 1846 2113 4.8E-52 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.40.50.720 2373 2527 3.3E-88 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.90.180.10 2283 2557 3.3E-88 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 987 1228 1.5E-80 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2921 3171 6.1E-84 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.40.50.12780 5 402 5.5E-113 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SUPERFAMILY SSF47336 2826 2935 3.53E-22 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4221 4391 1.1E-50 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2567 2745 3.7E-47 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SMART SM00826 3796 3958 4.8E-56 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SMART SM00826 1846 2004 2.2E-68 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SUPERFAMILY SSF47336 4454 4538 5.23E-17 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF00698 Acyl transferase domain 1503 1806 4.7E-75 T 14-10-2018 IPR014043 Acyl transferase Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF00698 Acyl transferase domain 3452 3753 1.4E-45 T 14-10-2018 IPR014043 Acyl transferase Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF08659 KR domain 2567 2743 1.7E-51 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF08659 KR domain 4221 4390 3.4E-47 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SUPERFAMILY SSF51735 4071 4208 2.01E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.40.366.10 3451 3737 3.9E-126 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.40.366.10 1502 1790 1.0E-145 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SUPERFAMILY SSF52151 1500 1776 1.28E-67 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:1.10.1200.10 876 967 1.6E-22 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SMART SM01294 2829 2896 4.1E-6 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2855 2870 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 3084 3100 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SMART SM00825 Beta-ketoacyl synthase 989 1403 2.5E-199 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SMART SM00825 Beta-ketoacyl synthase 2923 3346 3.4E-204 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 2279 2335 1.9E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.40.50.720 4071 4446 3.1E-91 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.40.50.720 508 754 2.1E-16 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SMART SM00829 2260 2557 5.9E-149 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.30.70.3290 3373 3782 3.9E-126 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SUPERFAMILY SSF52151 3450 3730 1.18E-57 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SUPERFAMILY SSF53901 2917 3292 8.82E-98 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.10.129.110 1835 2117 4.1E-94 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.10.129.110 3788 4070 3.6E-81 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SUPERFAMILY SSF56801 8 500 1.28E-148 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.30.70.3290 1417 1834 1.0E-145 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 3453 3734 4.5E-85 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1504 1787 6.6E-105 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SUPERFAMILY SSF53901 984 1350 7.44E-97 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SUPERFAMILY SSF47336 886 972 1.3E-14 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1363 1442 4.7E-10 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3307 3393 5.4E-8 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 ProSitePatterns PS00455 Putative AMP-binding domain signature. 162 173 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SUPERFAMILY SSF51735 2363 2532 8.13E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SUPERFAMILY SSF51735 4219 4435 1.89E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF13602 Zinc-binding dehydrogenase 2438 2557 1.6E-14 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF00501 AMP-binding enzyme 15 409 2.5E-97 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.30.300.30 403 501 6.4E-25 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SMART SM00823 Phosphopantetheine attachment site 4463 4535 3.7E-22 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SMART SM00823 Phosphopantetheine attachment site 2828 2900 2.6E-30 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SMART SM00823 Phosphopantetheine attachment site 893 964 4.3E-17 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SUPERFAMILY SSF55048 3575 3629 1.18E-7 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SUPERFAMILY SSF51735 2057 2240 3.86E-14 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1141 1157 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SUPERFAMILY SSF51735 2565 2814 6.72E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.40.50.720 2119 2282 7.6E-15 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.40.50.720 2560 2812 2.9E-62 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.40.50.720 773 870 1.9E-8 T 14-10-2018 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF00550 Phosphopantetheine attachment site 4468 4531 4.2E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF00550 Phosphopantetheine attachment site 2830 2896 8.0E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF00550 Phosphopantetheine attachment site 914 960 3.4E-6 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4490 4505 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF13193 AMP-binding enzyme C-terminal domain 418 491 2.3E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SUPERFAMILY SSF55048 1624 1674 5.1E-9 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 SUPERFAMILY SSF50129 2273 2395 6.45E-25 T 14-10-2018 IPR011032 GroES-like superfamily Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.40.47.10 2913 3363 1.2E-178 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1236 1352 9.4E-43 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3180 3295 6.6E-43 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_3197 4e8188488b3a75485c10aa9fdfc6593e 4575 Gene3D G3DSA:3.40.47.10 976 1404 6.3E-174 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4014 b96c1f47e8d0a2d5fb6f4edeea0c9f34 166 SUPERFAMILY SSF46894 59 144 4.79E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4014 b96c1f47e8d0a2d5fb6f4edeea0c9f34 166 Gene3D G3DSA:1.10.10.10 56 148 9.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4014 b96c1f47e8d0a2d5fb6f4edeea0c9f34 166 SMART SM00862 71 144 2.1E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4014 b96c1f47e8d0a2d5fb6f4edeea0c9f34 166 Pfam PF00486 Transcriptional regulatory protein, C terminal 72 143 9.9E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_3207 bae2a12389765dba4856c50fc4aec1bc 191 Pfam PF01872 RibD C-terminal domain 2 182 4.2E-11 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Amir_3207 bae2a12389765dba4856c50fc4aec1bc 191 SUPERFAMILY SSF53597 2 190 4.71E-29 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_3207 bae2a12389765dba4856c50fc4aec1bc 191 Gene3D G3DSA:3.40.430.10 2 188 5.4E-37 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 349 358 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 PRINTS PR00359 B-class P450 signature 198 220 7.0E-56 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 PRINTS PR00359 B-class P450 signature 280 291 7.0E-56 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 PRINTS PR00359 B-class P450 signature 144 160 7.0E-56 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 PRINTS PR00359 B-class P450 signature 356 367 7.0E-56 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 PRINTS PR00359 B-class P450 signature 97 108 7.0E-56 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 PRINTS PR00359 B-class P450 signature 161 176 7.0E-56 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 PRINTS PR00359 B-class P450 signature 298 325 7.0E-56 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 PRINTS PR00359 B-class P450 signature 326 341 7.0E-56 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 PRINTS PR00359 B-class P450 signature 347 356 7.0E-56 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 SUPERFAMILY SSF48264 25 407 4.45E-91 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 Gene3D G3DSA:1.10.630.10 20 407 2.5E-118 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 Pfam PF00067 Cytochrome P450 224 372 5.3E-18 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 PRINTS PR00385 P450 superfamily signature 243 260 1.5E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 PRINTS PR00385 P450 superfamily signature 280 291 1.5E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 PRINTS PR00385 P450 superfamily signature 347 356 1.5E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2894 c2b8266639d7457d98b5a54bb6e19e1c 407 PRINTS PR00385 P450 superfamily signature 356 367 1.5E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1034 6c3668b332e45c466288e2d803175216 394 Gene3D G3DSA:3.40.1190.10 27 267 7.2E-38 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amir_1034 6c3668b332e45c466288e2d803175216 394 SUPERFAMILY SSF53623 27 263 2.44E-34 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amir_1034 6c3668b332e45c466288e2d803175216 394 Pfam PF08245 Mur ligase middle domain 42 246 2.6E-17 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Amir_1034 6c3668b332e45c466288e2d803175216 394 Pfam PF08353 Domain of unknown function (DUF1727) 284 383 1.6E-26 T 14-10-2018 IPR013564 Domain of unknown function DUF1727 Amir_5768 5b4e85bc6a3873aee6ef8e7df0a7beac 450 SUPERFAMILY SSF53623 107 304 6.02E-44 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amir_5768 5b4e85bc6a3873aee6ef8e7df0a7beac 450 Gene3D G3DSA:3.40.50.720 4 92 6.1E-15 T 14-10-2018 Amir_5768 5b4e85bc6a3873aee6ef8e7df0a7beac 450 Gene3D G3DSA:3.40.1190.10 93 306 1.0E-44 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amir_5768 5b4e85bc6a3873aee6ef8e7df0a7beac 450 Pfam PF08245 Mur ligase middle domain 114 232 3.1E-20 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Amir_5768 5b4e85bc6a3873aee6ef8e7df0a7beac 450 SUPERFAMILY SSF51984 5 93 7.06E-14 T 14-10-2018 Amir_5768 5b4e85bc6a3873aee6ef8e7df0a7beac 450 Gene3D G3DSA:3.90.190.20 312 450 1.6E-39 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amir_5768 5b4e85bc6a3873aee6ef8e7df0a7beac 450 SUPERFAMILY SSF53244 308 448 5.95E-37 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amir_5768 5b4e85bc6a3873aee6ef8e7df0a7beac 450 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 448 31.18 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amir_5768 5b4e85bc6a3873aee6ef8e7df0a7beac 450 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 112 135 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Amir_5768 5b4e85bc6a3873aee6ef8e7df0a7beac 450 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 446 8.8E-111 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amir_2271 5cf3b373a16ad2a53a921ed14e0d920d 180 SMART SM00867 13 177 4.4E-63 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Amir_2271 5cf3b373a16ad2a53a921ed14e0d920d 180 SUPERFAMILY SSF101874 12 179 3.53E-54 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Amir_2271 5cf3b373a16ad2a53a921ed14e0d920d 180 Gene3D G3DSA:2.40.128.110 11 179 1.1E-51 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Amir_2271 5cf3b373a16ad2a53a921ed14e0d920d 180 Pfam PF04264 YceI-like domain 14 175 3.9E-48 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Amir_5852 f6e4139fab89dec9e7b3ebe35c9cb4a3 387 Gene3D G3DSA:1.10.510.10 280 383 5.2E-15 T 14-10-2018 Amir_5852 f6e4139fab89dec9e7b3ebe35c9cb4a3 387 Pfam PF01163 RIO1 family 212 367 2.0E-31 T 14-10-2018 Amir_5852 f6e4139fab89dec9e7b3ebe35c9cb4a3 387 Gene3D G3DSA:3.30.200.20 163 274 7.6E-6 T 14-10-2018 Amir_5852 f6e4139fab89dec9e7b3ebe35c9cb4a3 387 SMART SM00090 150 382 6.0E-8 T 14-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 Amir_5852 f6e4139fab89dec9e7b3ebe35c9cb4a3 387 SUPERFAMILY SSF56112 165 345 1.28E-15 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_6236 92b4916042556d911751141ce2b76219 387 SUPERFAMILY SSF55874 290 378 3.3E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6236 92b4916042556d911751141ce2b76219 387 Gene3D G3DSA:3.30.565.10 246 378 8.5E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6236 92b4916042556d911751141ce2b76219 387 SMART SM00387 289 380 2.2E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_6236 92b4916042556d911751141ce2b76219 387 Pfam PF07730 Histidine kinase 192 256 2.0E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_2059 26ae41b542ccca20301d959e8dc4a9a3 208 Gene3D G3DSA:1.20.1260.10 51 207 2.4E-48 T 14-10-2018 IPR012347 Ferritin-like Amir_2059 26ae41b542ccca20301d959e8dc4a9a3 208 Pfam PF03713 Domain of unknown function (DUF305) 60 206 4.6E-45 T 14-10-2018 IPR005183 Domain of unknown function DUF305 Amir_5947 9df511ddbacece363553e0b64e95654a 509 Gene3D G3DSA:1.20.1730.10 23 494 1.1E-85 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Amir_5947 9df511ddbacece363553e0b64e95654a 509 Pfam PF00474 Sodium:solute symporter family 33 435 6.8E-25 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Amir_6381 ef80f1176f4a9ff540da02fe9eb153b3 424 SMART SM00388 201 265 7.9E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_6381 ef80f1176f4a9ff540da02fe9eb153b3 424 SUPERFAMILY SSF55874 266 407 3.41E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6381 ef80f1176f4a9ff540da02fe9eb153b3 424 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 261 2.9E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_6381 ef80f1176f4a9ff540da02fe9eb153b3 424 SMART SM00387 307 408 9.3E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_6381 ef80f1176f4a9ff540da02fe9eb153b3 424 SMART SM00304 148 200 0.0094 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_6381 ef80f1176f4a9ff540da02fe9eb153b3 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 356 3.7E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_6381 ef80f1176f4a9ff540da02fe9eb153b3 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 388 3.7E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_6381 ef80f1176f4a9ff540da02fe9eb153b3 424 SUPERFAMILY SSF47384 184 262 5.1E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_6381 ef80f1176f4a9ff540da02fe9eb153b3 424 Gene3D G3DSA:1.10.287.130 152 264 9.9E-17 T 14-10-2018 Amir_6381 ef80f1176f4a9ff540da02fe9eb153b3 424 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 310 406 2.5E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_6381 ef80f1176f4a9ff540da02fe9eb153b3 424 Gene3D G3DSA:3.30.565.10 265 411 5.7E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 Gene3D G3DSA:1.10.630.10 2 400 2.5E-136 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 340 349 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 Pfam PF00067 Cytochrome P450 268 368 2.0E-21 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 PRINTS PR00359 B-class P450 signature 289 316 7.2E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 PRINTS PR00359 B-class P450 signature 317 332 7.2E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 PRINTS PR00359 B-class P450 signature 338 347 7.2E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 PRINTS PR00359 B-class P450 signature 91 102 7.2E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 PRINTS PR00359 B-class P450 signature 154 169 7.2E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 PRINTS PR00359 B-class P450 signature 137 153 7.2E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 PRINTS PR00359 B-class P450 signature 271 282 7.2E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 PRINTS PR00359 B-class P450 signature 190 212 7.2E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 PRINTS PR00359 B-class P450 signature 347 358 7.2E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 SUPERFAMILY SSF48264 4 399 4.58E-100 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 PRINTS PR00385 P450 superfamily signature 347 358 3.4E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 PRINTS PR00385 P450 superfamily signature 338 347 3.4E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 PRINTS PR00385 P450 superfamily signature 236 253 3.4E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4235 dfd5dd0f680efa5bd8052a75f71a34b8 400 PRINTS PR00385 P450 superfamily signature 271 282 3.4E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_6245 8c2eafde70277990d3a41afd3e512d8e 163 Gene3D G3DSA:3.40.30.10 1 162 6.4E-60 T 14-10-2018 Amir_6245 8c2eafde70277990d3a41afd3e512d8e 163 PRINTS PR01011 Glutathione peroxidase family signature 21 38 9.9E-20 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Amir_6245 8c2eafde70277990d3a41afd3e512d8e 163 PRINTS PR01011 Glutathione peroxidase family signature 56 72 9.9E-20 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Amir_6245 8c2eafde70277990d3a41afd3e512d8e 163 PRINTS PR01011 Glutathione peroxidase family signature 122 131 9.9E-20 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Amir_6245 8c2eafde70277990d3a41afd3e512d8e 163 PIRSF PIRSF000303 1 163 9.4E-63 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Amir_6245 8c2eafde70277990d3a41afd3e512d8e 163 SUPERFAMILY SSF52833 1 160 4.59E-55 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_6245 8c2eafde70277990d3a41afd3e512d8e 163 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 Amir_6245 8c2eafde70277990d3a41afd3e512d8e 163 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 14-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 Amir_6245 8c2eafde70277990d3a41afd3e512d8e 163 Pfam PF00255 Glutathione peroxidase 3 109 2.5E-41 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Amir_4637 bbe67eddedf7ddb64b70e04347f9c7c5 309 SUPERFAMILY SSF50129 1 149 2.43E-36 T 14-10-2018 IPR011032 GroES-like superfamily Amir_4637 bbe67eddedf7ddb64b70e04347f9c7c5 309 Gene3D G3DSA:3.40.50.720 128 260 2.4E-76 T 14-10-2018 Amir_4637 bbe67eddedf7ddb64b70e04347f9c7c5 309 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 93 6.3E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_4637 bbe67eddedf7ddb64b70e04347f9c7c5 309 Gene3D G3DSA:3.90.180.10 8 306 2.4E-76 T 14-10-2018 Amir_4637 bbe67eddedf7ddb64b70e04347f9c7c5 309 Pfam PF13602 Zinc-binding dehydrogenase 188 307 4.3E-14 T 14-10-2018 Amir_4637 bbe67eddedf7ddb64b70e04347f9c7c5 309 SUPERFAMILY SSF51735 118 240 3.13E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4637 bbe67eddedf7ddb64b70e04347f9c7c5 309 SMART SM00829 10 307 1.7E-13 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_1188 812e26c73969d31f41bd575f7e6a09da 87 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 3.0E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_1188 812e26c73969d31f41bd575f7e6a09da 87 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 27.937 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_1188 812e26c73969d31f41bd575f7e6a09da 87 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_1188 812e26c73969d31f41bd575f7e6a09da 87 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.5E-36 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_1188 812e26c73969d31f41bd575f7e6a09da 87 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.5E-36 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_1188 812e26c73969d31f41bd575f7e6a09da 87 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.5E-36 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_1188 812e26c73969d31f41bd575f7e6a09da 87 SUPERFAMILY SSF110324 2 81 4.88E-32 T 14-10-2018 Amir_1188 812e26c73969d31f41bd575f7e6a09da 87 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 70 2.0E-16 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_1188 812e26c73969d31f41bd575f7e6a09da 87 Pfam PF01016 Ribosomal L27 protein 2 80 5.3E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_1188 812e26c73969d31f41bd575f7e6a09da 87 Gene3D G3DSA:2.40.50.100 21 87 1.8E-28 T 14-10-2018 Amir_4599 9b992567580645cba33e6fca513055c1 445 SUPERFAMILY SSF48264 4 445 1.7E-110 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4599 9b992567580645cba33e6fca513055c1 445 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 387 396 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_4599 9b992567580645cba33e6fca513055c1 445 Gene3D G3DSA:1.10.630.10 4 443 2.3E-125 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4599 9b992567580645cba33e6fca513055c1 445 PRINTS PR00385 P450 superfamily signature 258 275 1.5E-13 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4599 9b992567580645cba33e6fca513055c1 445 PRINTS PR00385 P450 superfamily signature 310 321 1.5E-13 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4599 9b992567580645cba33e6fca513055c1 445 PRINTS PR00385 P450 superfamily signature 394 405 1.5E-13 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4599 9b992567580645cba33e6fca513055c1 445 PRINTS PR00385 P450 superfamily signature 385 394 1.5E-13 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4599 9b992567580645cba33e6fca513055c1 445 Pfam PF00067 Cytochrome P450 6 420 2.0E-81 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4599 9b992567580645cba33e6fca513055c1 445 PRINTS PR00463 E-class P450 group I signature 349 373 2.3E-25 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4599 9b992567580645cba33e6fca513055c1 445 PRINTS PR00463 E-class P450 group I signature 309 327 2.3E-25 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4599 9b992567580645cba33e6fca513055c1 445 PRINTS PR00463 E-class P450 group I signature 384 394 2.3E-25 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4599 9b992567580645cba33e6fca513055c1 445 PRINTS PR00463 E-class P450 group I signature 267 293 2.3E-25 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4599 9b992567580645cba33e6fca513055c1 445 PRINTS PR00463 E-class P450 group I signature 11 30 2.3E-25 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4599 9b992567580645cba33e6fca513055c1 445 PRINTS PR00463 E-class P450 group I signature 394 417 2.3E-25 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4599 9b992567580645cba33e6fca513055c1 445 PRINTS PR00463 E-class P450 group I signature 247 264 2.3E-25 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2534 7b5cc1556f99cf3274837221e7da5a90 404 Pfam PF01547 Bacterial extracellular solute-binding protein 57 158 1.5E-4 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_2534 7b5cc1556f99cf3274837221e7da5a90 404 SUPERFAMILY SSF53850 34 391 1.14E-28 T 14-10-2018 Amir_2534 7b5cc1556f99cf3274837221e7da5a90 404 Gene3D G3DSA:3.40.190.10 137 359 3.2E-22 T 14-10-2018 Amir_2534 7b5cc1556f99cf3274837221e7da5a90 404 Gene3D G3DSA:3.40.190.10 59 339 3.2E-22 T 14-10-2018 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Gene3D G3DSA:3.30.559.30 192 436 5.2E-22 T 14-10-2018 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Gene3D G3DSA:3.30.559.30 1255 1512 1.3E-33 T 14-10-2018 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 ProSitePatterns PS00012 Phosphopantetheine attachment site. 995 1010 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Pfam PF00668 Condensation domain 10 312 3.9E-25 T 14-10-2018 IPR001242 Condensation domain Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Pfam PF00668 Condensation domain 1066 1510 2.0E-59 T 14-10-2018 IPR001242 Condensation domain Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Gene3D G3DSA:3.40.50.1820 2023 2108 3.3E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Pfam PF13193 AMP-binding enzyme C-terminal domain 1931 2005 1.1E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Pfam PF13193 AMP-binding enzyme C-terminal domain 858 944 6.2E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 SUPERFAMILY SSF52777 188 416 2.56E-16 T 14-10-2018 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Gene3D G3DSA:3.30.559.10 1059 1254 2.2E-44 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Gene3D G3DSA:1.10.1200.10 963 1040 2.7E-19 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1551 1947 4.8E-117 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 473 874 6.9E-121 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Pfam PF00501 AMP-binding enzyme 1530 1923 4.8E-85 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Pfam PF00501 AMP-binding enzyme 452 850 7.2E-84 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 SUPERFAMILY SSF52777 8 183 2.22E-23 T 14-10-2018 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 SUPERFAMILY SSF47336 963 1035 1.44E-13 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 SMART SM00823 Phosphopantetheine attachment site 2030 2099 1.4E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 SMART SM00823 Phosphopantetheine attachment site 971 1039 0.66 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1666 1677 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 SUPERFAMILY SSF56801 1518 2043 1.1E-143 T 14-10-2018 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 SUPERFAMILY SSF52777 1254 1494 7.45E-28 T 14-10-2018 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 SUPERFAMILY SSF52777 1062 1266 5.11E-38 T 14-10-2018 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Gene3D G3DSA:3.40.50.12780 444 842 1.5E-118 T 14-10-2018 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Gene3D G3DSA:3.40.50.12780 1521 1915 3.9E-118 T 14-10-2018 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Pfam PF00550 Phosphopantetheine attachment site 2032 2094 1.2E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Pfam PF00550 Phosphopantetheine attachment site 974 1034 2.9E-5 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Gene3D G3DSA:3.30.559.10 2 191 6.9E-28 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Gene3D G3DSA:3.30.300.30 844 962 4.0E-32 T 14-10-2018 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 Gene3D G3DSA:3.30.300.30 1917 2022 1.2E-35 T 14-10-2018 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 SUPERFAMILY SSF56801 437 984 6.93E-142 T 14-10-2018 Amir_3684 6e84b23fa0b4e1118ebdcf9b0d7496b0 2109 SUPERFAMILY SSF47336 2023 2095 1.44E-18 T 14-10-2018 IPR036736 ACP-like superfamily Amir_0649 dd5729e2d9c4264f961a06bed8f118a8 321 Pfam PF08544 GHMP kinases C terminal 213 285 6.1E-9 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain Amir_0649 dd5729e2d9c4264f961a06bed8f118a8 321 Pfam PF00288 GHMP kinases N terminal domain 98 154 2.6E-10 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Amir_0649 dd5729e2d9c4264f961a06bed8f118a8 321 Gene3D G3DSA:3.30.70.890 171 311 2.8E-45 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Amir_0649 dd5729e2d9c4264f961a06bed8f118a8 321 SUPERFAMILY SSF55060 173 293 7.19E-24 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Amir_0649 dd5729e2d9c4264f961a06bed8f118a8 321 SUPERFAMILY SSF54211 8 167 3.57E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_0649 dd5729e2d9c4264f961a06bed8f118a8 321 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 10 280 2.3E-52 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Amir_0649 dd5729e2d9c4264f961a06bed8f118a8 321 Gene3D G3DSA:3.30.230.10 3 169 1.7E-60 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amir_0649 dd5729e2d9c4264f961a06bed8f118a8 321 PIRSF PIRSF010376 8 306 9.0E-79 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Amir_0649 dd5729e2d9c4264f961a06bed8f118a8 321 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 9 298 30.787 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Amir_6390 c7d2515a40bed49f0081d5cb278a4da0 543 SUPERFAMILY SSF52096 19 270 2.32E-77 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_6390 c7d2515a40bed49f0081d5cb278a4da0 543 Pfam PF01039 Carboxyl transferase domain 42 541 1.1E-194 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Amir_6390 c7d2515a40bed49f0081d5cb278a4da0 543 Gene3D G3DSA:3.90.226.10 279 543 8.0E-95 T 14-10-2018 Amir_6390 c7d2515a40bed49f0081d5cb278a4da0 543 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 143 161 3.0E-5 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Amir_6390 c7d2515a40bed49f0081d5cb278a4da0 543 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 109 123 3.0E-5 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Amir_6390 c7d2515a40bed49f0081d5cb278a4da0 543 Gene3D G3DSA:3.90.226.10 8 272 9.9E-96 T 14-10-2018 Amir_6390 c7d2515a40bed49f0081d5cb278a4da0 543 SUPERFAMILY SSF52096 257 543 1.39E-89 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_0099 ffb1dcd930e3e5118c995374e52c5058 199 SUPERFAMILY SSF52949 19 193 1.68E-15 T 14-10-2018 Amir_0099 ffb1dcd930e3e5118c995374e52c5058 199 Gene3D G3DSA:3.40.220.10 6 195 2.3E-25 T 14-10-2018 Amir_0099 ffb1dcd930e3e5118c995374e52c5058 199 Pfam PF01661 Macro domain 61 183 2.5E-5 T 14-10-2018 IPR002589 Macro domain Amir_3857 74c948bb716bbb9c05a316a5b34f820e 178 Pfam PF01252 Signal peptidase (SPase) II 20 152 4.9E-29 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amir_3857 74c948bb716bbb9c05a316a5b34f820e 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 7.1E-16 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amir_3857 74c948bb716bbb9c05a316a5b34f820e 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 133 149 7.1E-16 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amir_3857 74c948bb716bbb9c05a316a5b34f820e 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 55 63 7.1E-16 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amir_3857 74c948bb716bbb9c05a316a5b34f820e 178 TIGRFAM TIGR00077 lspA: signal peptidase II 16 154 1.0E-25 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amir_3857 74c948bb716bbb9c05a316a5b34f820e 178 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 11 158 13.318 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amir_3857 74c948bb716bbb9c05a316a5b34f820e 178 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amir_1432 2490687caac302cd2190ee52264f2553 151 Pfam PF03477 ATP cone domain 47 132 9.1E-15 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Amir_1432 2490687caac302cd2190ee52264f2553 151 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 2 144 1.2E-47 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Amir_1432 2490687caac302cd2190ee52264f2553 151 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 150 75.835 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Amir_2347 17cbb6d67aa3b2e997023db39341e735 559 PIRSF PIRSF004862 4 558 5.5E-129 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amir_2347 17cbb6d67aa3b2e997023db39341e735 559 Pfam PF01514 Secretory protein of YscJ/FliF family 32 221 4.2E-66 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF Amir_2347 17cbb6d67aa3b2e997023db39341e735 559 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 17 556 3.6E-80 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amir_2347 17cbb6d67aa3b2e997023db39341e735 559 Pfam PF08345 Flagellar M-ring protein C-terminal 255 413 5.5E-32 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal Amir_2347 17cbb6d67aa3b2e997023db39341e735 559 PRINTS PR01009 Flagellar M-ring protein signature 349 373 4.9E-23 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amir_2347 17cbb6d67aa3b2e997023db39341e735 559 PRINTS PR01009 Flagellar M-ring protein signature 122 140 4.9E-23 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amir_2347 17cbb6d67aa3b2e997023db39341e735 559 PRINTS PR01009 Flagellar M-ring protein signature 268 286 4.9E-23 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amir_2347 17cbb6d67aa3b2e997023db39341e735 559 PRINTS PR01009 Flagellar M-ring protein signature 197 215 4.9E-23 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amir_2347 17cbb6d67aa3b2e997023db39341e735 559 PRINTS PR01009 Flagellar M-ring protein signature 154 168 4.9E-23 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amir_2347 17cbb6d67aa3b2e997023db39341e735 559 Gene3D G3DSA:3.30.300.30 121 223 2.8E-12 T 14-10-2018 Amir_2434 5d398886a47c0dbf6a632f8ea78bfe34 296 Pfam PF03537 Glycoside-hydrolase family GH114 43 288 2.9E-72 T 14-10-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain Amir_2434 5d398886a47c0dbf6a632f8ea78bfe34 296 SUPERFAMILY SSF51445 79 282 1.49E-31 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_4864 0c3cda7e168493518520f55d4797aec8 685 Gene3D G3DSA:1.20.1720.10 34 243 1.0E-49 T 14-10-2018 Amir_4864 0c3cda7e168493518520f55d4797aec8 685 SUPERFAMILY SSF46785 530 653 9.86E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4864 0c3cda7e168493518520f55d4797aec8 685 SUPERFAMILY SSF103473 19 513 1.11E-64 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4864 0c3cda7e168493518520f55d4797aec8 685 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 33 445 6.8E-76 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Amir_4864 0c3cda7e168493518520f55d4797aec8 685 Gene3D G3DSA:1.10.10.10 528 679 1.3E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4864 0c3cda7e168493518520f55d4797aec8 685 Pfam PF07690 Major Facilitator Superfamily 37 430 1.2E-46 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_1030 2516b3d5b8be473c3c591490b2dc2cd7 204 Pfam PF16859 Bacterial transcriptional repressor C-terminal 85 195 3.6E-33 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Amir_1030 2516b3d5b8be473c3c591490b2dc2cd7 204 Gene3D G3DSA:1.10.357.10 66 203 4.2E-35 T 14-10-2018 Amir_1030 2516b3d5b8be473c3c591490b2dc2cd7 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 71 2.0E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1030 2516b3d5b8be473c3c591490b2dc2cd7 204 Gene3D G3DSA:1.10.10.60 12 65 9.9E-21 T 14-10-2018 Amir_1030 2516b3d5b8be473c3c591490b2dc2cd7 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 39 70 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_1030 2516b3d5b8be473c3c591490b2dc2cd7 204 SUPERFAMILY SSF46689 17 81 9.98E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_1030 2516b3d5b8be473c3c591490b2dc2cd7 204 SUPERFAMILY SSF48498 85 201 1.14E-23 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_1051 f2be389102ea2f9dbfc0ad3140798262 141 Pfam PF03852 DNA mismatch endonuclease Vsr 11 73 2.8E-18 T 14-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 Amir_1051 f2be389102ea2f9dbfc0ad3140798262 141 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 11 120 5.6E-33 T 14-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 Amir_1051 f2be389102ea2f9dbfc0ad3140798262 141 SUPERFAMILY SSF52980 7 131 2.68E-34 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Amir_1051 f2be389102ea2f9dbfc0ad3140798262 141 Gene3D G3DSA:3.40.960.10 21 138 1.0E-38 T 14-10-2018 Amir_2773 7f96555b3a3129f0c71b0f6888a65a20 192 Gene3D G3DSA:1.10.10.10 121 185 1.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2773 7f96555b3a3129f0c71b0f6888a65a20 192 Pfam PF08281 Sigma-70, region 4 129 178 3.8E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_2773 7f96555b3a3129f0c71b0f6888a65a20 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 179 2.5E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_2773 7f96555b3a3129f0c71b0f6888a65a20 192 SUPERFAMILY SSF88659 123 182 6.32E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_2773 7f96555b3a3129f0c71b0f6888a65a20 192 Pfam PF04542 Sigma-70 region 2 36 99 8.7E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_2773 7f96555b3a3129f0c71b0f6888a65a20 192 Gene3D G3DSA:1.10.1740.10 7 96 5.8E-28 T 14-10-2018 Amir_2773 7f96555b3a3129f0c71b0f6888a65a20 192 SUPERFAMILY SSF88946 10 109 5.49E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5271 edad4b5e069d85a325641e2cd35d29e1 254 SUPERFAMILY SSF53335 29 254 8.82E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_5271 edad4b5e069d85a325641e2cd35d29e1 254 Gene3D G3DSA:3.40.50.150 20 253 9.2E-67 T 14-10-2018 Amir_5271 edad4b5e069d85a325641e2cd35d29e1 254 Pfam PF13649 Methyltransferase domain 51 144 5.4E-11 T 14-10-2018 Amir_0714 6110c8049c62911a21d5435ab5eeedb5 259 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 29 258 7.5E-63 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Amir_0714 6110c8049c62911a21d5435ab5eeedb5 259 Gene3D G3DSA:3.40.1180.10 13 259 2.1E-82 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Amir_0714 6110c8049c62911a21d5435ab5eeedb5 259 Pfam PF01255 Putative undecaprenyl diphosphate synthase 35 258 7.0E-69 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Amir_0714 6110c8049c62911a21d5435ab5eeedb5 259 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 204 221 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Amir_0714 6110c8049c62911a21d5435ab5eeedb5 259 SUPERFAMILY SSF64005 24 253 1.57E-71 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Amir_0714 6110c8049c62911a21d5435ab5eeedb5 259 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 28 259 35.358 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Amir_3894 ce6b8e694c626c72fecc944f8c1b9630 403 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 347 356 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_3894 ce6b8e694c626c72fecc944f8c1b9630 403 SUPERFAMILY SSF48264 12 397 1.96E-74 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3894 ce6b8e694c626c72fecc944f8c1b9630 403 PRINTS PR00359 B-class P450 signature 291 318 4.0E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3894 ce6b8e694c626c72fecc944f8c1b9630 403 PRINTS PR00359 B-class P450 signature 354 365 4.0E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3894 ce6b8e694c626c72fecc944f8c1b9630 403 PRINTS PR00359 B-class P450 signature 161 176 4.0E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3894 ce6b8e694c626c72fecc944f8c1b9630 403 PRINTS PR00359 B-class P450 signature 196 218 4.0E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3894 ce6b8e694c626c72fecc944f8c1b9630 403 PRINTS PR00359 B-class P450 signature 144 160 4.0E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3894 ce6b8e694c626c72fecc944f8c1b9630 403 PRINTS PR00359 B-class P450 signature 273 284 4.0E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3894 ce6b8e694c626c72fecc944f8c1b9630 403 PRINTS PR00359 B-class P450 signature 319 334 4.0E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3894 ce6b8e694c626c72fecc944f8c1b9630 403 PRINTS PR00359 B-class P450 signature 345 354 4.0E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3894 ce6b8e694c626c72fecc944f8c1b9630 403 PRINTS PR00359 B-class P450 signature 99 110 4.0E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3894 ce6b8e694c626c72fecc944f8c1b9630 403 Pfam PF00067 Cytochrome P450 273 375 1.2E-12 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3894 ce6b8e694c626c72fecc944f8c1b9630 403 Gene3D G3DSA:1.10.630.10 2 403 1.9E-107 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_6965 3d3997a016a26ecf9b175147af00aa11 892 Pfam PF04294 VanW like protein 684 815 1.4E-38 T 14-10-2018 IPR007391 Vancomycin resistance VanW Amir_6965 3d3997a016a26ecf9b175147af00aa11 892 Pfam PF12229 Putative peptidoglycan binding domain 574 645 9.4E-11 T 14-10-2018 IPR022029 Putative peptidoglycan binding domain Amir_3629 cb78d6e62ec39b5f62013ccedd3b1f78 424 SUPERFAMILY SSF103473 39 413 1.83E-33 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_3629 cb78d6e62ec39b5f62013ccedd3b1f78 424 Pfam PF07690 Major Facilitator Superfamily 41 379 8.5E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_3629 cb78d6e62ec39b5f62013ccedd3b1f78 424 Gene3D G3DSA:1.20.1250.20 9 414 3.1E-34 T 14-10-2018 Amir_6266 0f03d8fc7de1e75f3f3a4441d9beffd8 503 Gene3D G3DSA:1.20.200.10 199 502 5.2E-112 T 14-10-2018 Amir_6266 0f03d8fc7de1e75f3f3a4441d9beffd8 503 Pfam PF00221 Aromatic amino acid lyase 11 473 5.0E-181 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 Amir_6266 0f03d8fc7de1e75f3f3a4441d9beffd8 503 SUPERFAMILY SSF48557 3 499 6.67E-180 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Amir_6266 0f03d8fc7de1e75f3f3a4441d9beffd8 503 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 Amir_6266 0f03d8fc7de1e75f3f3a4441d9beffd8 503 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 498 1.8E-196 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amir_6266 0f03d8fc7de1e75f3f3a4441d9beffd8 503 Gene3D G3DSA:1.10.275.10 1 198 1.2E-64 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Amir_3026 7db94c8981b26923812437841e6e3a4b 610 Gene3D G3DSA:1.20.1560.10 21 356 6.4E-56 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_3026 7db94c8981b26923812437841e6e3a4b 610 SMART SM00382 393 582 1.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3026 7db94c8981b26923812437841e6e3a4b 610 Pfam PF00005 ABC transporter 384 537 1.9E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3026 7db94c8981b26923812437841e6e3a4b 610 SUPERFAMILY SSF90123 44 359 1.7E-57 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_3026 7db94c8981b26923812437841e6e3a4b 610 Pfam PF00664 ABC transporter transmembrane region 57 325 1.8E-31 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_3026 7db94c8981b26923812437841e6e3a4b 610 SUPERFAMILY SSF52540 363 606 1.14E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3026 7db94c8981b26923812437841e6e3a4b 610 Gene3D G3DSA:3.40.50.300 365 610 2.9E-62 T 14-10-2018 Amir_7084 dde956d3ec673276820d7093c47e1ab3 203 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 176 4.9E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_7084 dde956d3ec673276820d7093c47e1ab3 203 Pfam PF04542 Sigma-70 region 2 26 92 9.0E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_7084 dde956d3ec673276820d7093c47e1ab3 203 Pfam PF08281 Sigma-70, region 4 122 173 1.0E-17 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_7084 dde956d3ec673276820d7093c47e1ab3 203 SUPERFAMILY SSF88659 113 178 9.59E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_7084 dde956d3ec673276820d7093c47e1ab3 203 Gene3D G3DSA:1.10.10.10 118 178 1.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_7084 dde956d3ec673276820d7093c47e1ab3 203 Gene3D G3DSA:1.10.1740.10 2 117 1.5E-31 T 14-10-2018 Amir_7084 dde956d3ec673276820d7093c47e1ab3 203 SUPERFAMILY SSF88946 6 107 1.24E-29 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6836 8aad7f4c71e3f98a3888e609614e5963 144 Pfam PF01475 Ferric uptake regulator family 17 131 3.0E-23 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Amir_6836 8aad7f4c71e3f98a3888e609614e5963 144 Gene3D G3DSA:1.10.10.10 7 88 2.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6836 8aad7f4c71e3f98a3888e609614e5963 144 SUPERFAMILY SSF46785 11 138 2.82E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6836 8aad7f4c71e3f98a3888e609614e5963 144 Gene3D G3DSA:3.30.1490.190 89 144 2.5E-14 T 14-10-2018 Amir_4551 83716e4315792771899ff0d52590cfa0 292 SUPERFAMILY SSF56112 88 251 3.88E-6 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_4937 00e383b38d4d5bdfe2689ee5ed02a773 530 Gene3D G3DSA:1.20.1530.20 3 410 4.1E-9 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Amir_4937 00e383b38d4d5bdfe2689ee5ed02a773 530 Pfam PF00999 Sodium/hydrogen exchanger family 9 403 4.4E-58 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Amir_4937 00e383b38d4d5bdfe2689ee5ed02a773 530 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 8 521 6.0E-122 T 14-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 Amir_1900 b0d83b06527c6b956ee30d985064200f 328 Gene3D G3DSA:3.40.50.300 15 299 1.3E-101 T 14-10-2018 Amir_1900 b0d83b06527c6b956ee30d985064200f 328 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 52 278 2.5E-100 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related Amir_1900 b0d83b06527c6b956ee30d985064200f 328 SUPERFAMILY SSF52540 82 270 6.71E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1900 b0d83b06527c6b956ee30d985064200f 328 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 52 279 1.7E-113 T 14-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 Amir_1900 b0d83b06527c6b956ee30d985064200f 328 PIRSF PIRSF028756 25 302 1.9E-116 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 Amir_2594 f5ca005f1c9cda3ece8d5a97d1960670 212 SUPERFAMILY SSF52833 6 211 1.06E-42 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_2594 f5ca005f1c9cda3ece8d5a97d1960670 212 Pfam PF01323 DSBA-like thioredoxin domain 7 206 3.3E-39 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Amir_2594 f5ca005f1c9cda3ece8d5a97d1960670 212 Gene3D G3DSA:3.40.30.10 4 210 2.8E-70 T 14-10-2018 Amir_1202 bb14091f4c2b39326dc12d96b9a2fc30 242 Pfam PF10531 SLBB domain 113 165 1.1E-11 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_1202 bb14091f4c2b39326dc12d96b9a2fc30 242 Pfam PF12836 Helix-hairpin-helix motif 181 241 4.2E-20 T 14-10-2018 Amir_1202 bb14091f4c2b39326dc12d96b9a2fc30 242 SUPERFAMILY SSF47781 170 240 6.89E-25 T 14-10-2018 IPR010994 RuvA domain 2-like Amir_1202 bb14091f4c2b39326dc12d96b9a2fc30 242 SMART SM00278 220 239 910.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amir_1202 bb14091f4c2b39326dc12d96b9a2fc30 242 SMART SM00278 66 85 710.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amir_1202 bb14091f4c2b39326dc12d96b9a2fc30 242 SMART SM00278 190 209 0.0018 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amir_1202 bb14091f4c2b39326dc12d96b9a2fc30 242 Gene3D G3DSA:1.10.150.320 169 242 1.2E-22 T 14-10-2018 Amir_2791 da3983103c9c386d4ddd44cee327375c 179 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 3 16 3.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2791 da3983103c9c386d4ddd44cee327375c 179 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 47 3.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2791 da3983103c9c386d4ddd44cee327375c 179 SUPERFAMILY SSF46689 2 65 6.31E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2791 da3983103c9c386d4ddd44cee327375c 179 Gene3D G3DSA:1.10.357.10 1 174 2.8E-22 T 14-10-2018 Amir_2791 da3983103c9c386d4ddd44cee327375c 179 Pfam PF00440 Bacterial regulatory proteins, tetR family 3 49 1.6E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 SUPERFAMILY SSF47384 212 293 7.46E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 SUPERFAMILY SSF158472 176 225 3.66E-6 T 14-10-2018 Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 293 1.0E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 Pfam PF00672 HAMP domain 176 217 1.5E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 Gene3D G3DSA:1.20.1480.50 139 228 2.1E-9 T 14-10-2018 Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 SMART SM00304 176 228 1.6E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 441 3.5E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 SMART SM00388 229 294 3.5E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 SUPERFAMILY SSF55874 283 441 8.77E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 SUPERFAMILY SSF103190 85 142 2.63E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 Gene3D G3DSA:3.30.565.10 298 446 5.1E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 Gene3D G3DSA:1.10.287.130 229 294 1.8E-15 T 14-10-2018 Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 440 1.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 1.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 1.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 1.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4137 0020ad598cc02354adb9821b211ed7c9 448 SMART SM00387 337 443 4.4E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4104 7fff98d0a23c43958ce68728d62b4636 250 Gene3D G3DSA:1.10.10.60 61 111 1.7E-14 T 14-10-2018 Amir_4104 7fff98d0a23c43958ce68728d62b4636 250 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 86 102 9.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amir_4104 7fff98d0a23c43958ce68728d62b4636 250 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 71 86 9.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amir_4104 7fff98d0a23c43958ce68728d62b4636 250 Gene3D G3DSA:1.10.10.60 2 60 1.2E-12 T 14-10-2018 Amir_4104 7fff98d0a23c43958ce68728d62b4636 250 SMART SM00342 19 102 1.2E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4104 7fff98d0a23c43958ce68728d62b4636 250 SUPERFAMILY SSF46689 3 52 2.51E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4104 7fff98d0a23c43958ce68728d62b4636 250 SUPERFAMILY SSF117074 148 220 7.85E-7 T 14-10-2018 Amir_4104 7fff98d0a23c43958ce68728d62b4636 250 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 56 98 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amir_4104 7fff98d0a23c43958ce68728d62b4636 250 Pfam PF12833 Helix-turn-helix domain 31 103 1.7E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4104 7fff98d0a23c43958ce68728d62b4636 250 SUPERFAMILY SSF46689 55 103 4.44E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0620 62ea56e89d48d9bfb832284269f09005 674 Pfam PF13365 Trypsin-like peptidase domain 400 544 9.9E-35 T 14-10-2018 Amir_0620 62ea56e89d48d9bfb832284269f09005 674 Gene3D G3DSA:2.30.42.10 587 673 3.9E-25 T 14-10-2018 Amir_0620 62ea56e89d48d9bfb832284269f09005 674 Gene3D G3DSA:2.40.10.10 372 463 3.9E-28 T 14-10-2018 Amir_0620 62ea56e89d48d9bfb832284269f09005 674 SUPERFAMILY SSF50494 364 597 3.07E-56 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_0620 62ea56e89d48d9bfb832284269f09005 674 Pfam PF13180 PDZ domain 590 659 4.3E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Amir_0620 62ea56e89d48d9bfb832284269f09005 674 PRINTS PR00834 HtrA/DegQ protease family signature 433 453 3.6E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_0620 62ea56e89d48d9bfb832284269f09005 674 PRINTS PR00834 HtrA/DegQ protease family signature 618 630 3.6E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_0620 62ea56e89d48d9bfb832284269f09005 674 PRINTS PR00834 HtrA/DegQ protease family signature 474 498 3.6E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_0620 62ea56e89d48d9bfb832284269f09005 674 PRINTS PR00834 HtrA/DegQ protease family signature 409 421 3.6E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_0620 62ea56e89d48d9bfb832284269f09005 674 PRINTS PR00834 HtrA/DegQ protease family signature 515 532 3.6E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_0620 62ea56e89d48d9bfb832284269f09005 674 PRINTS PR00834 HtrA/DegQ protease family signature 537 554 3.6E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_0620 62ea56e89d48d9bfb832284269f09005 674 SMART SM00228 589 660 3.3E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Amir_0620 62ea56e89d48d9bfb832284269f09005 674 Gene3D G3DSA:2.40.10.10 464 586 4.6E-46 T 14-10-2018 Amir_0620 62ea56e89d48d9bfb832284269f09005 674 SUPERFAMILY SSF50156 559 661 3.46E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Amir_5791 0614faa7b8f1e51ef620f239398aafff 342 Pfam PF01180 Dihydroorotate dehydrogenase 49 339 1.5E-86 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Amir_5791 0614faa7b8f1e51ef620f239398aafff 342 PIRSF PIRSF000164 17 341 2.2E-97 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Amir_5791 0614faa7b8f1e51ef620f239398aafff 342 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 84 103 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Amir_5791 0614faa7b8f1e51ef620f239398aafff 342 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 5 339 1.2E-116 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Amir_5791 0614faa7b8f1e51ef620f239398aafff 342 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 295 315 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Amir_5791 0614faa7b8f1e51ef620f239398aafff 342 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 3 339 46.784 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Amir_5791 0614faa7b8f1e51ef620f239398aafff 342 Gene3D G3DSA:3.20.20.70 2 338 1.9E-124 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5791 0614faa7b8f1e51ef620f239398aafff 342 SUPERFAMILY SSF51395 4 339 7.33E-93 T 14-10-2018 Amir_3070 6320da90665c8df0fe6f8d41e7da9c28 212 SMART SM00382 29 207 2.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3070 6320da90665c8df0fe6f8d41e7da9c28 212 SUPERFAMILY SSF52540 3 204 4.36E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3070 6320da90665c8df0fe6f8d41e7da9c28 212 Pfam PF00005 ABC transporter 21 158 1.5E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3070 6320da90665c8df0fe6f8d41e7da9c28 212 Gene3D G3DSA:3.40.50.300 2 209 4.7E-49 T 14-10-2018 Amir_3070 6320da90665c8df0fe6f8d41e7da9c28 212 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0385 ad30b1ae9e6a288da806105370a35651 940 Pfam PF00486 Transcriptional regulatory protein, C terminal 34 99 1.3E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_0385 ad30b1ae9e6a288da806105370a35651 940 SMART SM01043 108 244 1.1E-43 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_0385 ad30b1ae9e6a288da806105370a35651 940 SUPERFAMILY SSF48452 752 924 3.79E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0385 ad30b1ae9e6a288da806105370a35651 940 Pfam PF03704 Bacterial transcriptional activator domain 103 244 5.8E-38 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_0385 ad30b1ae9e6a288da806105370a35651 940 Gene3D G3DSA:1.10.10.10 3 103 2.9E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0385 ad30b1ae9e6a288da806105370a35651 940 SUPERFAMILY SSF52540 270 543 7.66E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0385 ad30b1ae9e6a288da806105370a35651 940 PRINTS PR00364 Disease resistance protein signature 384 398 1.0E-7 T 14-10-2018 Amir_0385 ad30b1ae9e6a288da806105370a35651 940 PRINTS PR00364 Disease resistance protein signature 472 486 1.0E-7 T 14-10-2018 Amir_0385 ad30b1ae9e6a288da806105370a35651 940 PRINTS PR00364 Disease resistance protein signature 304 319 1.0E-7 T 14-10-2018 Amir_0385 ad30b1ae9e6a288da806105370a35651 940 SUPERFAMILY SSF48452 103 262 2.38E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0385 ad30b1ae9e6a288da806105370a35651 940 Pfam PF00931 NB-ARC domain 304 550 2.5E-9 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 Amir_0385 ad30b1ae9e6a288da806105370a35651 940 Gene3D G3DSA:1.25.40.10 104 262 1.1E-43 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0385 ad30b1ae9e6a288da806105370a35651 940 Gene3D G3DSA:1.25.40.10 698 940 1.1E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0385 ad30b1ae9e6a288da806105370a35651 940 SUPERFAMILY SSF46894 10 101 2.04E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_0385 ad30b1ae9e6a288da806105370a35651 940 Gene3D G3DSA:3.40.50.300 266 427 1.3E-24 T 14-10-2018 Amir_0385 ad30b1ae9e6a288da806105370a35651 940 SMART SM00862 23 101 1.1E-12 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_3187 b47d1edb4ec4ba3e5e172ae5ad4172dd 371 SUPERFAMILY SSF47203 224 367 3.7E-35 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_3187 b47d1edb4ec4ba3e5e172ae5ad4172dd 371 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 114 126 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amir_3187 b47d1edb4ec4ba3e5e172ae5ad4172dd 371 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 109 5.0E-13 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_3187 b47d1edb4ec4ba3e5e172ae5ad4172dd 371 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 224 366 6.5E-32 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_3187 b47d1edb4ec4ba3e5e172ae5ad4172dd 371 Gene3D G3DSA:2.40.110.10 111 218 1.5E-24 T 14-10-2018 Amir_3187 b47d1edb4ec4ba3e5e172ae5ad4172dd 371 Gene3D G3DSA:1.20.140.10 219 369 1.8E-37 T 14-10-2018 Amir_3187 b47d1edb4ec4ba3e5e172ae5ad4172dd 371 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 112 205 5.6E-18 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amir_3187 b47d1edb4ec4ba3e5e172ae5ad4172dd 371 SUPERFAMILY SSF56645 8 217 3.27E-48 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_3187 b47d1edb4ec4ba3e5e172ae5ad4172dd 371 Gene3D G3DSA:1.10.540.10 5 110 7.8E-20 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_2556 589e4f98338af6e8492bf457e6f5fe95 382 SUPERFAMILY SSF50370 248 379 2.35E-21 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_2556 589e4f98338af6e8492bf457e6f5fe95 382 Pfam PF13620 Carboxypeptidase regulatory-like domain 46 100 1.2E-11 T 14-10-2018 Amir_2556 589e4f98338af6e8492bf457e6f5fe95 382 Pfam PF00652 Ricin-type beta-trefoil lectin domain 248 337 4.9E-10 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_2556 589e4f98338af6e8492bf457e6f5fe95 382 SMART SM00458 245 382 3.0E-12 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_2556 589e4f98338af6e8492bf457e6f5fe95 382 Gene3D G3DSA:2.60.40.10 19 110 2.8E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2556 589e4f98338af6e8492bf457e6f5fe95 382 Gene3D G3DSA:2.60.40.10 117 239 3.3E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2556 589e4f98338af6e8492bf457e6f5fe95 382 SUPERFAMILY SSF49478 24 94 3.88E-11 T 14-10-2018 Amir_2556 589e4f98338af6e8492bf457e6f5fe95 382 Gene3D G3DSA:2.80.10.50 246 381 9.9E-24 T 14-10-2018 Amir_2556 589e4f98338af6e8492bf457e6f5fe95 382 Pfam PF17210 SdrD B-like domain 120 235 1.9E-12 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2556 589e4f98338af6e8492bf457e6f5fe95 382 SUPERFAMILY SSF117074 116 195 3.4E-10 T 14-10-2018 Amir_5018 c1ad967179f307f797796c6a695e9489 346 Gene3D G3DSA:1.10.600.10 10 346 2.9E-106 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_5018 c1ad967179f307f797796c6a695e9489 346 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 99 113 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Amir_5018 c1ad967179f307f797796c6a695e9489 346 Pfam PF00348 Polyprenyl synthetase 61 280 1.3E-52 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Amir_5018 c1ad967179f307f797796c6a695e9489 346 SUPERFAMILY SSF48576 35 344 3.2E-72 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_3989 1da433eaff83dea9c7383ca00de4e9bc 350 PIRSF PIRSF015753 7 319 2.0E-107 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 Amir_3989 1da433eaff83dea9c7383ca00de4e9bc 350 Pfam PF13409 Glutathione S-transferase, N-terminal domain 58 152 2.3E-11 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Amir_3989 1da433eaff83dea9c7383ca00de4e9bc 350 SUPERFAMILY SSF52833 35 107 3.35E-5 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_3989 1da433eaff83dea9c7383ca00de4e9bc 350 Gene3D G3DSA:1.20.1050.10 174 348 1.3E-73 T 14-10-2018 Amir_3989 1da433eaff83dea9c7383ca00de4e9bc 350 Gene3D G3DSA:3.40.30.130 4 173 4.6E-54 T 14-10-2018 Amir_3989 1da433eaff83dea9c7383ca00de4e9bc 350 Pfam PF13410 Glutathione S-transferase, C-terminal domain 199 268 3.0E-12 T 14-10-2018 Amir_3989 1da433eaff83dea9c7383ca00de4e9bc 350 SUPERFAMILY SSF47616 167 334 3.76E-34 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Amir_1282 d167e8fdfbc56c7474b6b7fdf0c692cf 136 Gene3D G3DSA:3.90.79.10 2 135 2.7E-27 T 14-10-2018 Amir_1282 d167e8fdfbc56c7474b6b7fdf0c692cf 136 Pfam PF00293 NUDIX domain 13 128 8.2E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_1282 d167e8fdfbc56c7474b6b7fdf0c692cf 136 SUPERFAMILY SSF55811 7 130 5.42E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_1282 d167e8fdfbc56c7474b6b7fdf0c692cf 136 PRINTS PR00502 NUDIX hydrolase family signature 30 44 1.3E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_1282 d167e8fdfbc56c7474b6b7fdf0c692cf 136 PRINTS PR00502 NUDIX hydrolase family signature 44 59 1.3E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_2776 f457a2bc4c693fac414824c003614745 206 Gene3D G3DSA:1.10.357.10 18 206 4.3E-50 T 14-10-2018 Amir_2776 f457a2bc4c693fac414824c003614745 206 SUPERFAMILY SSF46689 28 92 7.48E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2776 f457a2bc4c693fac414824c003614745 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 80 7.7E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6295 e784b68ca61232404f2764e937fab281 253 Gene3D G3DSA:3.90.1680.10 1 237 7.4E-71 T 14-10-2018 IPR036590 SOS response associated peptidase-like Amir_6295 e784b68ca61232404f2764e937fab281 253 Pfam PF02586 SOS response associated peptidase (SRAP) 2 225 7.6E-69 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) Amir_6295 e784b68ca61232404f2764e937fab281 253 SUPERFAMILY SSF143081 2 237 1.11E-66 T 14-10-2018 IPR036590 SOS response associated peptidase-like Amir_3510 02f8cc0f4bf6264e865fffb47e931e63 323 SUPERFAMILY SSF81606 79 320 1.96E-47 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3510 02f8cc0f4bf6264e865fffb47e931e63 323 SMART SM00332 66 317 3.1E-11 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3510 02f8cc0f4bf6264e865fffb47e931e63 323 SMART SM00331 83 319 7.7E-9 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3510 02f8cc0f4bf6264e865fffb47e931e63 323 Gene3D G3DSA:3.60.40.10 70 321 1.6E-53 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3510 02f8cc0f4bf6264e865fffb47e931e63 323 Pfam PF13672 Protein phosphatase 2C 87 286 3.6E-15 T 14-10-2018 Amir_6983 3454c93409e74875af69b9e595c547e1 397 SUPERFAMILY SSF52518 38 387 6.45E-93 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_6983 3454c93409e74875af69b9e595c547e1 397 Pfam PF00676 Dehydrogenase E1 component 71 345 7.5E-73 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Amir_6983 3454c93409e74875af69b9e595c547e1 397 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 41 384 4.5E-129 T 14-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Amir_6983 3454c93409e74875af69b9e595c547e1 397 Gene3D G3DSA:3.40.50.970 16 385 3.0E-113 T 14-10-2018 Amir_3659 184f5700aeb028df2a46eb7a5b9c90ff 280 Pfam PF13359 DDE superfamily endonuclease 125 274 2.5E-28 T 14-10-2018 IPR027806 Harbinger transposase-derived nuclease domain Amir_3659 184f5700aeb028df2a46eb7a5b9c90ff 280 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 55 106 4.8E-19 T 14-10-2018 IPR027805 Transposase, Helix-turn-helix domain Amir_0183 184f5700aeb028df2a46eb7a5b9c90ff 280 Pfam PF13359 DDE superfamily endonuclease 125 274 2.5E-28 T 14-10-2018 IPR027806 Harbinger transposase-derived nuclease domain Amir_0183 184f5700aeb028df2a46eb7a5b9c90ff 280 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 55 106 4.8E-19 T 14-10-2018 IPR027805 Transposase, Helix-turn-helix domain Amir_6087 184f5700aeb028df2a46eb7a5b9c90ff 280 Pfam PF13359 DDE superfamily endonuclease 125 274 2.5E-28 T 14-10-2018 IPR027806 Harbinger transposase-derived nuclease domain Amir_6087 184f5700aeb028df2a46eb7a5b9c90ff 280 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 55 106 4.8E-19 T 14-10-2018 IPR027805 Transposase, Helix-turn-helix domain Amir_3271 184f5700aeb028df2a46eb7a5b9c90ff 280 Pfam PF13359 DDE superfamily endonuclease 125 274 2.5E-28 T 14-10-2018 IPR027806 Harbinger transposase-derived nuclease domain Amir_3271 184f5700aeb028df2a46eb7a5b9c90ff 280 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 55 106 4.8E-19 T 14-10-2018 IPR027805 Transposase, Helix-turn-helix domain Amir_0583 184f5700aeb028df2a46eb7a5b9c90ff 280 Pfam PF13359 DDE superfamily endonuclease 125 274 2.5E-28 T 14-10-2018 IPR027806 Harbinger transposase-derived nuclease domain Amir_0583 184f5700aeb028df2a46eb7a5b9c90ff 280 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 55 106 4.8E-19 T 14-10-2018 IPR027805 Transposase, Helix-turn-helix domain Amir_0310 d951df32f2e6877f4cdf4967f85be0ee 308 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 16 295 19.809 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Amir_0310 d951df32f2e6877f4cdf4967f85be0ee 308 Gene3D G3DSA:3.40.50.620 21 227 2.8E-60 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_0310 d951df32f2e6877f4cdf4967f85be0ee 308 SUPERFAMILY SSF82829 205 300 3.14E-12 T 14-10-2018 Amir_0310 d951df32f2e6877f4cdf4967f85be0ee 308 SUPERFAMILY SSF52402 25 227 3.67E-45 T 14-10-2018 Amir_0310 d951df32f2e6877f4cdf4967f85be0ee 308 Pfam PF01171 PP-loop family 28 192 4.4E-32 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Amir_0310 d951df32f2e6877f4cdf4967f85be0ee 308 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 27 196 1.5E-36 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Amir_0310 d951df32f2e6877f4cdf4967f85be0ee 308 Pfam PF09179 TilS substrate binding domain 238 301 1.0E-13 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Amir_7082 67384e7604d43502f7d78eabed471b85 521 PRINTS PR01806 Virulence factor MviN signature 256 282 8.9E-23 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amir_7082 67384e7604d43502f7d78eabed471b85 521 PRINTS PR01806 Virulence factor MviN signature 354 373 8.9E-23 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amir_7082 67384e7604d43502f7d78eabed471b85 521 PRINTS PR01806 Virulence factor MviN signature 24 43 8.9E-23 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amir_7082 67384e7604d43502f7d78eabed471b85 521 PRINTS PR01806 Virulence factor MviN signature 121 145 8.9E-23 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amir_7082 67384e7604d43502f7d78eabed471b85 521 PRINTS PR01806 Virulence factor MviN signature 43 59 8.9E-23 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amir_7082 67384e7604d43502f7d78eabed471b85 521 PRINTS PR01806 Virulence factor MviN signature 145 166 8.9E-23 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amir_7082 67384e7604d43502f7d78eabed471b85 521 Pfam PF03023 MviN-like protein 21 460 3.8E-84 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amir_3927 6b33e1a96d3ef792498a9b2c4b4e5fda 436 SMART SM00458 297 434 2.3E-16 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3927 6b33e1a96d3ef792498a9b2c4b4e5fda 436 Gene3D G3DSA:2.80.10.50 350 391 3.0E-15 T 14-10-2018 Amir_3927 6b33e1a96d3ef792498a9b2c4b4e5fda 436 Gene3D G3DSA:2.80.10.50 299 349 1.9E-14 T 14-10-2018 Amir_3927 6b33e1a96d3ef792498a9b2c4b4e5fda 436 SUPERFAMILY SSF50370 297 431 1.4E-45 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_3927 6b33e1a96d3ef792498a9b2c4b4e5fda 436 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 299 375 1.7E-24 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3927 6b33e1a96d3ef792498a9b2c4b4e5fda 436 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 381 432 8.0E-11 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3927 6b33e1a96d3ef792498a9b2c4b4e5fda 436 Pfam PF04616 Glycosyl hydrolases family 43 77 210 5.9E-12 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Amir_3927 6b33e1a96d3ef792498a9b2c4b4e5fda 436 SUPERFAMILY SSF75005 77 288 1.75E-21 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3927 6b33e1a96d3ef792498a9b2c4b4e5fda 436 Gene3D G3DSA:2.80.10.50 392 435 8.6E-11 T 14-10-2018 Amir_3927 6b33e1a96d3ef792498a9b2c4b4e5fda 436 Gene3D G3DSA:2.115.10.20 74 298 6.0E-17 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_6374 525482ac08ee1979957193ac4e5d9f44 61 Pfam PF04149 Domain of unknown function (DUF397) 5 56 2.2E-17 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_5758 438c5f401d6675fb1777e60326dbb888 231 PIRSF PIRSF004848 1 231 2.7E-60 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Amir_5758 438c5f401d6675fb1777e60326dbb888 231 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 8 226 4.0E-42 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Amir_5758 438c5f401d6675fb1777e60326dbb888 231 Gene3D G3DSA:3.20.20.10 1 229 2.3E-71 T 14-10-2018 IPR029066 PLP-binding barrel Amir_5758 438c5f401d6675fb1777e60326dbb888 231 Pfam PF01168 Alanine racemase, N-terminal domain 10 226 1.0E-19 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_5758 438c5f401d6675fb1777e60326dbb888 231 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 9 225 25.575 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Amir_5758 438c5f401d6675fb1777e60326dbb888 231 SUPERFAMILY SSF51419 4 224 1.83E-63 T 14-10-2018 IPR029066 PLP-binding barrel Amir_3317 1f3b77055be475f1eea462cd73bf3bc4 429 Gene3D G3DSA:1.10.8.620 273 326 1.0E-91 T 14-10-2018 Amir_3317 1f3b77055be475f1eea462cd73bf3bc4 429 Gene3D G3DSA:3.40.710.10 134 394 1.0E-91 T 14-10-2018 Amir_3317 1f3b77055be475f1eea462cd73bf3bc4 429 SUPERFAMILY SSF56601 134 414 1.28E-26 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_3317 1f3b77055be475f1eea462cd73bf3bc4 429 Pfam PF13354 Beta-lactamase enzyme family 165 346 1.6E-21 T 14-10-2018 Amir_4315 c9c916e7d3bfd9b555a1b22904e357a3 232 SUPERFAMILY SSF52317 8 186 1.8E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_4315 c9c916e7d3bfd9b555a1b22904e357a3 232 Pfam PF01965 DJ-1/PfpI family 8 166 2.5E-24 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Amir_4315 c9c916e7d3bfd9b555a1b22904e357a3 232 Gene3D G3DSA:3.40.50.880 1 229 1.2E-66 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_1389 4d7ab4f48db53d8e056bfb3a808b5bb4 325 Pfam PF00480 ROK family 3 311 1.5E-78 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_1389 4d7ab4f48db53d8e056bfb3a808b5bb4 325 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 4 311 3.9E-78 T 14-10-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 Amir_1389 4d7ab4f48db53d8e056bfb3a808b5bb4 325 Gene3D G3DSA:3.30.420.40 4 306 6.2E-100 T 14-10-2018 Amir_1389 4d7ab4f48db53d8e056bfb3a808b5bb4 325 ProSitePatterns PS01125 ROK family signature. 129 156 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_1389 4d7ab4f48db53d8e056bfb3a808b5bb4 325 Gene3D G3DSA:3.30.420.40 121 293 6.2E-100 T 14-10-2018 Amir_1389 4d7ab4f48db53d8e056bfb3a808b5bb4 325 SUPERFAMILY SSF53067 3 312 8.65E-62 T 14-10-2018 Amir_2832 b32bc3ecc46f8f56d967a5c4aa7b668d 417 SUPERFAMILY SSF53850 33 405 1.59E-66 T 14-10-2018 Amir_2832 b32bc3ecc46f8f56d967a5c4aa7b668d 417 Pfam PF13416 Bacterial extracellular solute-binding protein 47 356 5.5E-32 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_2832 b32bc3ecc46f8f56d967a5c4aa7b668d 417 Gene3D G3DSA:3.40.190.10 18 413 3.4E-71 T 14-10-2018 Amir_1420 0662871e52c6621723bf43e9d4b92635 167 Hamap MF_01114 Regulatory protein RecX [recX]. 2 154 14.278 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Amir_1420 0662871e52c6621723bf43e9d4b92635 167 Pfam PF02631 RecX family 29 149 2.7E-29 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Amir_1420 0662871e52c6621723bf43e9d4b92635 167 Gene3D G3DSA:1.10.10.10 53 98 1.6E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5278 b402cafb7f70dce7350bbe27ba4ab669 281 Pfam PF04397 LytTr DNA-binding domain 182 273 7.6E-22 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Amir_5278 b402cafb7f70dce7350bbe27ba4ab669 281 SMART SM00448 23 139 4.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5278 b402cafb7f70dce7350bbe27ba4ab669 281 Gene3D G3DSA:3.40.50.2300 19 152 1.3E-29 T 14-10-2018 Amir_5278 b402cafb7f70dce7350bbe27ba4ab669 281 SUPERFAMILY SSF52172 21 150 3.84E-29 T 14-10-2018 IPR011006 CheY-like superfamily Amir_5278 b402cafb7f70dce7350bbe27ba4ab669 281 Gene3D G3DSA:2.40.50.1020 171 280 3.9E-8 T 14-10-2018 Amir_5278 b402cafb7f70dce7350bbe27ba4ab669 281 Pfam PF00072 Response regulator receiver domain 25 139 1.4E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5278 b402cafb7f70dce7350bbe27ba4ab669 281 SMART SM00850 179 274 3.9E-27 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Amir_0777 f5b201ccfac375cdf77034b9b8466c44 286 SUPERFAMILY SSF51717 5 276 1.09E-76 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_0777 f5b201ccfac375cdf77034b9b8466c44 286 Pfam PF00809 Pterin binding enzyme 16 257 1.0E-65 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_0777 f5b201ccfac375cdf77034b9b8466c44 286 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 15 271 1.1E-80 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Amir_0777 f5b201ccfac375cdf77034b9b8466c44 286 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 15 30 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_0777 f5b201ccfac375cdf77034b9b8466c44 286 Gene3D G3DSA:3.20.20.20 2 286 9.6E-86 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 534 848 2.4E-60 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 SUPERFAMILY SSF55048 662 722 5.1E-6 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 Gene3D G3DSA:3.40.50.720 875 1312 9.7E-38 T 14-10-2018 Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 Gene3D G3DSA:3.40.366.10 532 833 2.9E-117 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 268 386 2.8E-40 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 173 189 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 SUPERFAMILY SSF53901 6 432 7.85E-78 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 Pfam PF00698 Acyl transferase domain 534 803 8.7E-42 T 14-10-2018 IPR014043 Acyl transferase Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 Gene3D G3DSA:1.10.1200.10 1313 1388 5.0E-22 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 SUPERFAMILY SSF52151 531 813 4.19E-57 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 11 260 2.0E-65 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 Pfam PF08659 KR domain 1071 1239 1.5E-14 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1343 1358 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 SUPERFAMILY SSF47336 1313 1385 5.37E-18 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 SMART SM00823 Phosphopantetheine attachment site 1319 1388 2.0E-6 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 Pfam PF00550 Phosphopantetheine attachment site 1321 1384 2.9E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 389 499 3.2E-14 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 Gene3D G3DSA:3.40.47.10 3 454 3.7E-155 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 SUPERFAMILY SSF51735 1069 1252 6.06E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 SMART SM00825 Beta-ketoacyl synthase 12 438 1.1E-162 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 Gene3D G3DSA:3.30.70.3290 455 874 2.9E-117 T 14-10-2018 Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 SUPERFAMILY SSF51735 901 1060 4.33E-8 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4911 eec27c2d195be420d8450c874fa55cb5 1466 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1069 1240 1.6E-4 T 14-10-2018 Amir_6689 7407f51b382c0d3f0fa54ae15e3b6a60 170 Pfam PF01883 Iron-sulfur cluster assembly protein 16 71 1.5E-11 T 14-10-2018 IPR002744 MIP18 family-like Amir_6689 7407f51b382c0d3f0fa54ae15e3b6a60 170 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 18 170 4.9E-56 T 14-10-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit Amir_6689 7407f51b382c0d3f0fa54ae15e3b6a60 170 SUPERFAMILY SSF117916 12 101 2.75E-19 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Amir_6689 7407f51b382c0d3f0fa54ae15e3b6a60 170 Gene3D G3DSA:3.30.300.130 9 101 9.5E-19 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Amir_0935 afdc188fb1490212aaccdcfd2ab1c5aa 368 Pfam PF00899 ThiF family 140 353 4.7E-6 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Amir_0935 afdc188fb1490212aaccdcfd2ab1c5aa 368 Gene3D G3DSA:3.40.50.720 134 353 1.7E-18 T 14-10-2018 Amir_0935 afdc188fb1490212aaccdcfd2ab1c5aa 368 SUPERFAMILY SSF69572 139 274 5.1E-12 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Amir_0935 afdc188fb1490212aaccdcfd2ab1c5aa 368 TIGRFAM TIGR03882 cyclo_dehyd_2: bacteriocin biosynthesis cyclodehydratase domain 240 355 4.3E-11 T 14-10-2018 IPR022291 Bacteriocin biosynthesis, cyclodehydratase domain Amir_1045 c6bb2f1a3cfc7521d7d826af7c92ae99 587 Gene3D G3DSA:2.40.110.10 153 264 5.6E-11 T 14-10-2018 Amir_1045 c6bb2f1a3cfc7521d7d826af7c92ae99 587 SUPERFAMILY SSF56645 33 256 5.76E-25 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_1045 c6bb2f1a3cfc7521d7d826af7c92ae99 587 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 262 409 3.2E-19 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_1045 c6bb2f1a3cfc7521d7d826af7c92ae99 587 Gene3D G3DSA:1.20.140.10 265 411 3.8E-22 T 14-10-2018 Amir_1045 c6bb2f1a3cfc7521d7d826af7c92ae99 587 SUPERFAMILY SSF47203 261 415 4.03E-28 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_6597 538d2cf94ccc00173264dd553b0d7835 201 Pfam PF03719 Ribosomal protein S5, C-terminal domain 111 181 1.9E-27 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Amir_6597 538d2cf94ccc00173264dd553b0d7835 201 ProSitePatterns PS00585 Ribosomal protein S5 signature. 52 84 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site Amir_6597 538d2cf94ccc00173264dd553b0d7835 201 SUPERFAMILY SSF54768 35 100 1.05E-22 T 14-10-2018 Amir_6597 538d2cf94ccc00173264dd553b0d7835 201 Pfam PF00333 Ribosomal protein S5, N-terminal domain 37 99 3.5E-28 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Amir_6597 538d2cf94ccc00173264dd553b0d7835 201 Gene3D G3DSA:3.30.160.20 28 96 3.5E-29 T 14-10-2018 Amir_6597 538d2cf94ccc00173264dd553b0d7835 201 SUPERFAMILY SSF54211 103 182 1.92E-24 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_6597 538d2cf94ccc00173264dd553b0d7835 201 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 4 187 34.436 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Amir_6597 538d2cf94ccc00173264dd553b0d7835 201 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 36 187 1.7E-67 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Amir_6597 538d2cf94ccc00173264dd553b0d7835 201 Gene3D G3DSA:3.30.230.10 101 190 1.4E-34 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amir_6228 87c7b68ca1fa60ebd89fd3997104fedf 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amir_6228 87c7b68ca1fa60ebd89fd3997104fedf 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 221 1.8E-21 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amir_6228 87c7b68ca1fa60ebd89fd3997104fedf 383 Gene3D G3DSA:2.40.110.10 122 239 5.8E-36 T 14-10-2018 Amir_6228 87c7b68ca1fa60ebd89fd3997104fedf 383 SUPERFAMILY SSF47203 231 381 4.83E-52 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_6228 87c7b68ca1fa60ebd89fd3997104fedf 383 PIRSF PIRSF016578 9 107 4.1E-4 T 14-10-2018 Amir_6228 87c7b68ca1fa60ebd89fd3997104fedf 383 PIRSF PIRSF016578 132 382 9.1E-10 T 14-10-2018 Amir_6228 87c7b68ca1fa60ebd89fd3997104fedf 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 381 1.2E-49 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_6228 87c7b68ca1fa60ebd89fd3997104fedf 383 Gene3D G3DSA:1.10.540.10 1 121 2.6E-42 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_6228 87c7b68ca1fa60ebd89fd3997104fedf 383 SUPERFAMILY SSF56645 2 246 1.7E-80 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_6228 87c7b68ca1fa60ebd89fd3997104fedf 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 340 359 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amir_6228 87c7b68ca1fa60ebd89fd3997104fedf 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 8.2E-37 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_6228 87c7b68ca1fa60ebd89fd3997104fedf 383 Gene3D G3DSA:1.20.140.10 240 383 1.1E-52 T 14-10-2018 Amir_3152 08501116db3409e2e83316ce3849ef80 391 Pfam PF00149 Calcineurin-like phosphoesterase 165 332 2.5E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amir_3152 08501116db3409e2e83316ce3849ef80 391 Gene3D G3DSA:3.60.21.10 164 352 2.6E-19 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Amir_3152 08501116db3409e2e83316ce3849ef80 391 SUPERFAMILY SSF56300 165 389 1.28E-36 T 14-10-2018 Amir_0182 83f503efb73c165b8f127e30e6627350 117 Gene3D G3DSA:1.10.260.40 6 107 1.2E-7 T 14-10-2018 Amir_0182 83f503efb73c165b8f127e30e6627350 117 Pfam PF13560 Helix-turn-helix domain 19 69 7.8E-7 T 14-10-2018 Amir_0182 83f503efb73c165b8f127e30e6627350 117 SMART SM00530 11 67 0.0013 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_0182 83f503efb73c165b8f127e30e6627350 117 SUPERFAMILY SSF47413 5 72 8.44E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2818 625c525e90c1a0d06aa6ad2eebfe706b 318 SUPERFAMILY SSF55729 177 289 1.35E-6 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_2818 625c525e90c1a0d06aa6ad2eebfe706b 318 Gene3D G3DSA:3.40.630.30 170 295 1.3E-6 T 14-10-2018 Amir_0702 7e5e11679560a42ae6b3b8ee09617b8d 383 SUPERFAMILY SSF53383 12 382 1.51E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_0702 7e5e11679560a42ae6b3b8ee09617b8d 383 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 11 382 6.0E-148 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amir_0702 7e5e11679560a42ae6b3b8ee09617b8d 383 PIRSF PIRSF001434 1 383 1.9E-148 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amir_0702 7e5e11679560a42ae6b3b8ee09617b8d 383 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 195 209 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amir_0702 7e5e11679560a42ae6b3b8ee09617b8d 383 Gene3D G3DSA:3.90.1150.10 254 383 5.3E-54 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_0702 7e5e11679560a42ae6b3b8ee09617b8d 383 Gene3D G3DSA:3.40.640.10 2 253 2.3E-101 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_2244 f3c73bab4dd81c4f20ad2b25c4dae713 197 SUPERFAMILY SSF46689 5 77 1.05E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2244 f3c73bab4dd81c4f20ad2b25c4dae713 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 2.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2244 f3c73bab4dd81c4f20ad2b25c4dae713 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.7E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2244 f3c73bab4dd81c4f20ad2b25c4dae713 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.7E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2244 f3c73bab4dd81c4f20ad2b25c4dae713 197 Gene3D G3DSA:1.10.357.10 2 191 1.4E-34 T 14-10-2018 Amir_4536 c278643adb3bb0e9a4ad2a51df514a4b 98 Gene3D G3DSA:1.10.1200.10 17 96 8.8E-15 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4536 c278643adb3bb0e9a4ad2a51df514a4b 98 SUPERFAMILY SSF47336 20 95 4.32E-13 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4536 c278643adb3bb0e9a4ad2a51df514a4b 98 Pfam PF00550 Phosphopantetheine attachment site 20 86 6.0E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2498 735597655135567def673fe804e7e610 595 SMART SM00382 363 549 3.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2498 735597655135567def673fe804e7e610 595 Gene3D G3DSA:3.40.50.300 330 580 3.6E-84 T 14-10-2018 Amir_2498 735597655135567def673fe804e7e610 595 SUPERFAMILY SSF52540 334 574 2.71E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2498 735597655135567def673fe804e7e610 595 SUPERFAMILY SSF90123 10 324 6.8E-59 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_2498 735597655135567def673fe804e7e610 595 Pfam PF00664 ABC transporter transmembrane region 24 287 3.9E-36 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_2498 735597655135567def673fe804e7e610 595 Gene3D G3DSA:1.20.1560.10 2 322 3.3E-64 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_2498 735597655135567def673fe804e7e610 595 Pfam PF00005 ABC transporter 354 503 4.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2498 735597655135567def673fe804e7e610 595 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_6259 2e7012f307965528b4ab25581b0f9b17 790 Gene3D G3DSA:1.25.40.10 462 669 4.1E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6259 2e7012f307965528b4ab25581b0f9b17 790 Pfam PF13424 Tetratricopeptide repeat 589 657 1.2E-8 T 14-10-2018 Amir_6259 2e7012f307965528b4ab25581b0f9b17 790 PRINTS PR00364 Disease resistance protein signature 159 173 3.1E-8 T 14-10-2018 Amir_6259 2e7012f307965528b4ab25581b0f9b17 790 PRINTS PR00364 Disease resistance protein signature 81 96 3.1E-8 T 14-10-2018 Amir_6259 2e7012f307965528b4ab25581b0f9b17 790 PRINTS PR00364 Disease resistance protein signature 247 261 3.1E-8 T 14-10-2018 Amir_6259 2e7012f307965528b4ab25581b0f9b17 790 Gene3D G3DSA:3.40.50.300 43 204 6.9E-28 T 14-10-2018 Amir_6259 2e7012f307965528b4ab25581b0f9b17 790 SUPERFAMILY SSF48452 666 762 1.78E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6259 2e7012f307965528b4ab25581b0f9b17 790 SUPERFAMILY SSF52540 43 316 1.76E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6259 2e7012f307965528b4ab25581b0f9b17 790 Pfam PF00931 NB-ARC domain 70 259 2.2E-7 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 Amir_6259 2e7012f307965528b4ab25581b0f9b17 790 Gene3D G3DSA:1.25.40.10 670 790 5.3E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6259 2e7012f307965528b4ab25581b0f9b17 790 SUPERFAMILY SSF48452 494 659 2.78E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0879 359579d03c377542e1bf6f0f9216569b 380 Gene3D G3DSA:3.30.70.120 132 235 3.8E-33 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Amir_0879 359579d03c377542e1bf6f0f9216569b 380 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 352 6.0E-67 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Amir_0879 359579d03c377542e1bf6f0f9216569b 380 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 6 358 3.0E-45 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Amir_0879 359579d03c377542e1bf6f0f9216569b 380 PIRSF PIRSF037489 1 371 4.7E-132 T 14-10-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria Amir_0879 359579d03c377542e1bf6f0f9216569b 380 Gene3D G3DSA:3.40.1390.30 2 117 3.3E-31 T 14-10-2018 Amir_0879 359579d03c377542e1bf6f0f9216569b 380 SUPERFAMILY SSF102705 1 369 4.84E-109 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Amir_4505 854e8225bda6a2277b86e603b9d9b749 427 Gene3D G3DSA:3.30.559.30 188 425 9.0E-122 T 14-10-2018 Amir_4505 854e8225bda6a2277b86e603b9d9b749 427 SUPERFAMILY SSF52777 190 424 2.56E-57 T 14-10-2018 Amir_4505 854e8225bda6a2277b86e603b9d9b749 427 SUPERFAMILY SSF52777 10 201 3.0E-38 T 14-10-2018 Amir_4505 854e8225bda6a2277b86e603b9d9b749 427 Gene3D G3DSA:3.30.559.10 14 374 9.0E-122 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_4505 854e8225bda6a2277b86e603b9d9b749 427 Pfam PF00668 Condensation domain 10 424 8.9E-74 T 14-10-2018 IPR001242 Condensation domain Amir_1409 f6be6021ce1e105380a980ed24dd90ec 531 Gene3D G3DSA:3.60.21.70 125 454 1.3E-17 T 14-10-2018 IPR038607 PhoD-like superfamily Amir_1409 f6be6021ce1e105380a980ed24dd90ec 531 SUPERFAMILY SSF56300 117 446 5.37E-12 T 14-10-2018 Amir_1409 f6be6021ce1e105380a980ed24dd90ec 531 Pfam PF09423 PhoD-like phosphatase 134 450 6.1E-15 T 14-10-2018 IPR018946 Alkaline phosphatase D-related Amir_2632 f302aa19d2adc8cbf1fd2b9aadf3ae88 229 SMART SM00862 149 224 2.8E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2632 f302aa19d2adc8cbf1fd2b9aadf3ae88 229 SUPERFAMILY SSF52172 2 182 2.42E-42 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2632 f302aa19d2adc8cbf1fd2b9aadf3ae88 229 Gene3D G3DSA:3.40.50.2300 1 130 1.2E-38 T 14-10-2018 Amir_2632 f302aa19d2adc8cbf1fd2b9aadf3ae88 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 3.1E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2632 f302aa19d2adc8cbf1fd2b9aadf3ae88 229 SMART SM00448 1 112 7.7E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2632 f302aa19d2adc8cbf1fd2b9aadf3ae88 229 Gene3D G3DSA:1.10.10.10 131 228 7.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2632 f302aa19d2adc8cbf1fd2b9aadf3ae88 229 Pfam PF00072 Response regulator receiver domain 3 113 2.6E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4339 6bb55dc03efe8d0f0729d83f9300eb29 434 Gene3D G3DSA:3.30.9.50 54 286 1.1E-60 T 14-10-2018 Amir_4339 6bb55dc03efe8d0f0729d83f9300eb29 434 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 18 40 1.1E-11 T 14-10-2018 Amir_4339 6bb55dc03efe8d0f0729d83f9300eb29 434 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 311 1.1E-11 T 14-10-2018 Amir_4339 6bb55dc03efe8d0f0729d83f9300eb29 434 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 162 177 1.1E-11 T 14-10-2018 Amir_4339 6bb55dc03efe8d0f0729d83f9300eb29 434 Gene3D G3DSA:3.50.50.60 21 357 1.1E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4339 6bb55dc03efe8d0f0729d83f9300eb29 434 SUPERFAMILY SSF51905 18 383 1.37E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4339 6bb55dc03efe8d0f0729d83f9300eb29 434 Pfam PF01494 FAD binding domain 126 332 4.2E-12 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_6154 69a11a6e401fae0c860a41b24f26ba4a 295 PRINTS PR00958 Homoserine kinase signature 131 144 3.7E-33 T 14-10-2018 Amir_6154 69a11a6e401fae0c860a41b24f26ba4a 295 PRINTS PR00958 Homoserine kinase signature 98 113 3.7E-33 T 14-10-2018 Amir_6154 69a11a6e401fae0c860a41b24f26ba4a 295 PRINTS PR00958 Homoserine kinase signature 16 31 3.7E-33 T 14-10-2018 Amir_6154 69a11a6e401fae0c860a41b24f26ba4a 295 PRINTS PR00958 Homoserine kinase signature 247 262 3.7E-33 T 14-10-2018 Amir_6154 69a11a6e401fae0c860a41b24f26ba4a 295 PRINTS PR00958 Homoserine kinase signature 170 187 3.7E-33 T 14-10-2018 Amir_6154 69a11a6e401fae0c860a41b24f26ba4a 295 Pfam PF08544 GHMP kinases C terminal 223 263 4.2E-5 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain Amir_6154 69a11a6e401fae0c860a41b24f26ba4a 295 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 91 102 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 Amir_6154 69a11a6e401fae0c860a41b24f26ba4a 295 Gene3D G3DSA:3.30.70.890 161 263 3.6E-76 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Amir_6154 69a11a6e401fae0c860a41b24f26ba4a 295 Gene3D G3DSA:3.30.230.10 10 160 3.6E-76 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amir_6154 69a11a6e401fae0c860a41b24f26ba4a 295 PIRSF PIRSF000676 5 276 2.1E-72 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Amir_6154 69a11a6e401fae0c860a41b24f26ba4a 295 TIGRFAM TIGR00191 thrB: homoserine kinase 9 265 3.7E-61 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Amir_6154 69a11a6e401fae0c860a41b24f26ba4a 295 Pfam PF00288 GHMP kinases N terminal domain 85 144 1.9E-11 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Amir_6154 69a11a6e401fae0c860a41b24f26ba4a 295 SUPERFAMILY SSF55060 166 267 1.34E-21 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Amir_6154 69a11a6e401fae0c860a41b24f26ba4a 295 Hamap MF_00384 Homoserine kinase [thrB]. 11 292 27.855 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Amir_6154 69a11a6e401fae0c860a41b24f26ba4a 295 SUPERFAMILY SSF54211 9 150 1.37E-26 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_5075 0497f8a0bb30b56baf598eb98ad0bc4f 288 SUPERFAMILY SSF46785 7 95 1.11E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5075 0497f8a0bb30b56baf598eb98ad0bc4f 288 Gene3D G3DSA:3.40.190.10 96 274 1.6E-60 T 14-10-2018 Amir_5075 0497f8a0bb30b56baf598eb98ad0bc4f 288 Pfam PF03466 LysR substrate binding domain 111 282 3.3E-8 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_5075 0497f8a0bb30b56baf598eb98ad0bc4f 288 SUPERFAMILY SSF53850 95 283 2.71E-14 T 14-10-2018 Amir_5075 0497f8a0bb30b56baf598eb98ad0bc4f 288 Gene3D G3DSA:3.40.190.10 158 253 1.6E-60 T 14-10-2018 Amir_5075 0497f8a0bb30b56baf598eb98ad0bc4f 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 2.0E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_5075 0497f8a0bb30b56baf598eb98ad0bc4f 288 Gene3D G3DSA:1.10.10.10 2 95 1.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5075 0497f8a0bb30b56baf598eb98ad0bc4f 288 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 6 284 2.5E-91 T 14-10-2018 IPR017685 HTH-type transcriptional regulator ArgP Amir_2435 2e254786d5636b09ee773dca536fc3ab 253 SUPERFAMILY SSF46785 4 64 8.32E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2435 2e254786d5636b09ee773dca536fc3ab 253 SMART SM01134 72 234 1.2E-44 T 14-10-2018 Amir_2435 2e254786d5636b09ee773dca536fc3ab 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.2E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_2435 2e254786d5636b09ee773dca536fc3ab 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.2E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_2435 2e254786d5636b09ee773dca536fc3ab 253 SUPERFAMILY SSF100950 76 233 3.35E-19 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Amir_2435 2e254786d5636b09ee773dca536fc3ab 253 Pfam PF00455 DeoR C terminal sensor domain 75 232 1.3E-39 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain Amir_2435 2e254786d5636b09ee773dca536fc3ab 253 Gene3D G3DSA:1.10.10.10 4 97 7.2E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2435 2e254786d5636b09ee773dca536fc3ab 253 Pfam PF08220 DeoR-like helix-turn-helix domain 7 59 5.0E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_2435 2e254786d5636b09ee773dca536fc3ab 253 SMART SM00420 6 58 2.6E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_2149 d2bf53bfb243dbe2d86c0acc40d46229 295 Gene3D G3DSA:3.40.190.10 31 292 2.9E-53 T 14-10-2018 Amir_2149 d2bf53bfb243dbe2d86c0acc40d46229 295 Gene3D G3DSA:3.40.190.10 98 230 2.9E-53 T 14-10-2018 Amir_2149 d2bf53bfb243dbe2d86c0acc40d46229 295 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 8 292 2.7E-45 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Amir_2149 d2bf53bfb243dbe2d86c0acc40d46229 295 Pfam PF16868 NMT1-like family 54 292 1.3E-33 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Amir_2149 d2bf53bfb243dbe2d86c0acc40d46229 295 SUPERFAMILY SSF53850 30 292 4.0E-41 T 14-10-2018 Amir_5912 fe9b0e580b289166783b632548b13ffa 331 Gene3D G3DSA:2.70.70.10 97 235 1.2E-15 T 14-10-2018 IPR011055 Duplicated hybrid motif Amir_5912 fe9b0e580b289166783b632548b13ffa 331 PRINTS PR01217 Proline rich extensin signature 12 24 7.1E-10 T 14-10-2018 Amir_5912 fe9b0e580b289166783b632548b13ffa 331 PRINTS PR01217 Proline rich extensin signature 77 93 7.1E-10 T 14-10-2018 Amir_5912 fe9b0e580b289166783b632548b13ffa 331 PRINTS PR01217 Proline rich extensin signature 56 77 7.1E-10 T 14-10-2018 Amir_5912 fe9b0e580b289166783b632548b13ffa 331 PRINTS PR01217 Proline rich extensin signature 121 146 7.1E-10 T 14-10-2018 Amir_5912 fe9b0e580b289166783b632548b13ffa 331 Pfam PF01551 Peptidase family M23 132 217 3.1E-13 T 14-10-2018 IPR016047 Peptidase M23 Amir_5912 fe9b0e580b289166783b632548b13ffa 331 SUPERFAMILY SSF51261 109 200 3.87E-11 T 14-10-2018 IPR011055 Duplicated hybrid motif Amir_3442 fc15690e69145416bee67b6f34e8841e 249 SUPERFAMILY SSF46785 7 63 1.55E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3442 fc15690e69145416bee67b6f34e8841e 249 SUPERFAMILY SSF100950 77 231 2.3E-28 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Amir_3442 fc15690e69145416bee67b6f34e8841e 249 Pfam PF08220 DeoR-like helix-turn-helix domain 8 62 1.8E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_3442 fc15690e69145416bee67b6f34e8841e 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 8.5E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_3442 fc15690e69145416bee67b6f34e8841e 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 8.5E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_3442 fc15690e69145416bee67b6f34e8841e 249 SMART SM01134 73 233 9.5E-53 T 14-10-2018 Amir_3442 fc15690e69145416bee67b6f34e8841e 249 Gene3D G3DSA:1.10.10.10 7 53 7.7E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3442 fc15690e69145416bee67b6f34e8841e 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Amir_3442 fc15690e69145416bee67b6f34e8841e 249 Pfam PF00455 DeoR C terminal sensor domain 77 231 2.0E-41 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain Amir_3442 fc15690e69145416bee67b6f34e8841e 249 SMART SM00420 8 60 8.1E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_2016 82ddbcf71bcb3920073fcb23d3887eee 225 Gene3D G3DSA:1.10.10.10 145 213 1.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2016 82ddbcf71bcb3920073fcb23d3887eee 225 Gene3D G3DSA:1.10.1740.10 33 115 8.4E-29 T 14-10-2018 Amir_2016 82ddbcf71bcb3920073fcb23d3887eee 225 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 47 207 1.0E-26 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_2016 82ddbcf71bcb3920073fcb23d3887eee 225 SUPERFAMILY SSF88659 151 209 1.87E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_2016 82ddbcf71bcb3920073fcb23d3887eee 225 Pfam PF08281 Sigma-70, region 4 154 205 5.9E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_2016 82ddbcf71bcb3920073fcb23d3887eee 225 Pfam PF04542 Sigma-70 region 2 51 118 3.1E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_2016 82ddbcf71bcb3920073fcb23d3887eee 225 SUPERFAMILY SSF88946 33 132 3.45E-27 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_3710 64a8e4df4fb25087dd05a5e146792130 258 Gene3D G3DSA:3.40.50.300 112 218 7.4E-8 T 14-10-2018 Amir_3710 64a8e4df4fb25087dd05a5e146792130 258 Gene3D G3DSA:3.40.50.300 40 108 6.1E-6 T 14-10-2018 Amir_3710 64a8e4df4fb25087dd05a5e146792130 258 SUPERFAMILY SSF52540 45 222 1.14E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3710 64a8e4df4fb25087dd05a5e146792130 258 SMART SM00382 48 239 0.0015 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5797 deae9884188c5d4f5f19df555ae76fde 138 SMART SM00530 12 67 7.4E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_5797 deae9884188c5d4f5f19df555ae76fde 138 Pfam PF13560 Helix-turn-helix domain 8 70 3.8E-12 T 14-10-2018 Amir_5797 deae9884188c5d4f5f19df555ae76fde 138 Gene3D G3DSA:1.10.260.40 3 72 1.9E-16 T 14-10-2018 Amir_5797 deae9884188c5d4f5f19df555ae76fde 138 SUPERFAMILY SSF47413 3 70 6.76E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_4295 2e217f0dfac2505ad27f5437d591e42b 347 Gene3D G3DSA:1.10.3470.10 19 346 5.9E-92 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_4295 2e217f0dfac2505ad27f5437d591e42b 347 Pfam PF01032 FecCD transport family 33 341 4.2E-86 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_4295 2e217f0dfac2505ad27f5437d591e42b 347 SUPERFAMILY SSF81345 17 341 1.31E-79 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_6447 d34fbd143bfadd1b6e4b73f25d1be8cf 408 Gene3D G3DSA:3.90.20.10 224 347 4.7E-5 T 14-10-2018 Amir_6447 d34fbd143bfadd1b6e4b73f25d1be8cf 408 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 84 318 0.008 T 14-10-2018 Amir_6447 d34fbd143bfadd1b6e4b73f25d1be8cf 408 SUPERFAMILY SSF58113 141 272 4.97E-10 T 14-10-2018 Amir_6447 d34fbd143bfadd1b6e4b73f25d1be8cf 408 Gene3D G3DSA:3.90.20.10 64 202 9.5E-9 T 14-10-2018 Amir_2873 4ea38fafb30307cb39061c0868768a00 364 Pfam PF01497 Periplasmic binding protein 107 335 4.0E-29 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Amir_2873 4ea38fafb30307cb39061c0868768a00 364 Gene3D G3DSA:3.40.50.1980 218 360 6.6E-42 T 14-10-2018 Amir_2873 4ea38fafb30307cb39061c0868768a00 364 SUPERFAMILY SSF53807 97 359 2.12E-38 T 14-10-2018 Amir_2873 4ea38fafb30307cb39061c0868768a00 364 Gene3D G3DSA:3.40.50.1980 92 217 9.2E-26 T 14-10-2018 Amir_0218 f10e262d1f2277748276ea427e058e35 355 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 119 2.3E-28 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Amir_0218 f10e262d1f2277748276ea427e058e35 355 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 7 351 8.6E-112 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amir_0218 f10e262d1f2277748276ea427e058e35 355 SUPERFAMILY SSF51735 7 158 1.61E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0218 f10e262d1f2277748276ea427e058e35 355 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 142 338 2.5E-45 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amir_0218 f10e262d1f2277748276ea427e058e35 355 PIRSF PIRSF000148 5 355 2.7E-106 T 14-10-2018 Amir_0218 f10e262d1f2277748276ea427e058e35 355 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 352 31.845 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amir_0218 f10e262d1f2277748276ea427e058e35 355 Gene3D G3DSA:3.30.360.10 130 335 3.6E-123 T 14-10-2018 Amir_0218 f10e262d1f2277748276ea427e058e35 355 SUPERFAMILY SSF55347 131 339 1.54E-64 T 14-10-2018 Amir_0218 f10e262d1f2277748276ea427e058e35 355 SMART SM00859 6 122 9.2E-36 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Amir_0218 f10e262d1f2277748276ea427e058e35 355 Gene3D G3DSA:3.40.50.720 8 349 3.6E-123 T 14-10-2018 Amir_2243 9bb9449df981767981b2e006d255e52f 184 Gene3D G3DSA:3.40.50.720 1 182 1.2E-44 T 14-10-2018 Amir_2243 9bb9449df981767981b2e006d255e52f 184 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 113 3.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2243 9bb9449df981767981b2e006d255e52f 184 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 82 3.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2243 9bb9449df981767981b2e006d255e52f 184 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 21 32 3.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2243 9bb9449df981767981b2e006d255e52f 184 SUPERFAMILY SSF51735 1 172 1.22E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2243 9bb9449df981767981b2e006d255e52f 184 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 84 1.5E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2243 9bb9449df981767981b2e006d255e52f 184 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 131 1.5E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2243 9bb9449df981767981b2e006d255e52f 184 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 32 1.5E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2243 9bb9449df981767981b2e006d255e52f 184 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 113 1.5E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2243 9bb9449df981767981b2e006d255e52f 184 Pfam PF00106 short chain dehydrogenase 1 135 2.5E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2243 9bb9449df981767981b2e006d255e52f 184 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 81 109 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_1155 90e7e630f397725bc3bf33dbddc45acc 196 Pfam PF06821 Serine hydrolase 6 184 1.3E-33 T 14-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 Amir_1155 90e7e630f397725bc3bf33dbddc45acc 196 Gene3D G3DSA:3.40.50.1820 2 193 4.0E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1155 90e7e630f397725bc3bf33dbddc45acc 196 SUPERFAMILY SSF53474 4 186 2.03E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2560 c6ed3366efa6053f83283fba7f60d6a8 656 Gene3D G3DSA:2.60.40.1180 418 511 4.0E-9 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_2560 c6ed3366efa6053f83283fba7f60d6a8 656 Gene3D G3DSA:3.20.20.80 44 417 3.9E-68 T 14-10-2018 Amir_2560 c6ed3366efa6053f83283fba7f60d6a8 656 SUPERFAMILY SSF50370 525 652 6.61E-22 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_2560 c6ed3366efa6053f83283fba7f60d6a8 656 Gene3D G3DSA:2.80.10.50 525 654 1.4E-16 T 14-10-2018 Amir_2560 c6ed3366efa6053f83283fba7f60d6a8 656 Pfam PF14587 O-Glycosyl hydrolase family 30 42 271 1.0E-15 T 14-10-2018 IPR039514 Endo-beta-1,6-galactanase-like GO:0004553 Amir_2560 c6ed3366efa6053f83283fba7f60d6a8 656 SUPERFAMILY SSF51445 46 421 1.69E-32 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_2560 c6ed3366efa6053f83283fba7f60d6a8 656 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 556 641 1.6E-13 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4620 c1a317e9bad01686baa3464d91f90db3 194 SUPERFAMILY SSF48498 82 192 3.77E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4620 c1a317e9bad01686baa3464d91f90db3 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 69 6.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4620 c1a317e9bad01686baa3464d91f90db3 194 Gene3D G3DSA:1.10.357.10 63 193 2.5E-17 T 14-10-2018 Amir_4620 c1a317e9bad01686baa3464d91f90db3 194 SUPERFAMILY SSF46689 15 78 1.9E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4620 c1a317e9bad01686baa3464d91f90db3 194 Gene3D G3DSA:1.10.10.60 14 62 5.0E-17 T 14-10-2018 Amir_4620 c1a317e9bad01686baa3464d91f90db3 194 Pfam PF16859 Bacterial transcriptional repressor C-terminal 82 186 6.3E-16 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Amir_4620 c1a317e9bad01686baa3464d91f90db3 194 ProSitePatterns PS01081 TetR-type HTH domain signature. 36 67 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_5635 f5f39af8b5fbb58bb47d2e185a78314f 1371 Pfam PF10145 Phage-related minor tail protein 86 286 5.9E-41 T 14-10-2018 IPR010090 Phage tail tape measure protein Amir_5635 f5f39af8b5fbb58bb47d2e185a78314f 1371 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 45 369 1.3E-50 T 14-10-2018 IPR010090 Phage tail tape measure protein Amir_2841 7593c90bb76f0cb7978a2cf3728a7da0 125 Pfam PF13411 MerR HTH family regulatory protein 2 66 1.0E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_2841 7593c90bb76f0cb7978a2cf3728a7da0 125 SMART SM00422 1 69 2.3E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_2841 7593c90bb76f0cb7978a2cf3728a7da0 125 SUPERFAMILY SSF46955 2 110 1.68E-22 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_2841 7593c90bb76f0cb7978a2cf3728a7da0 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 2.0E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_2841 7593c90bb76f0cb7978a2cf3728a7da0 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.0E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_2841 7593c90bb76f0cb7978a2cf3728a7da0 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.0E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_2841 7593c90bb76f0cb7978a2cf3728a7da0 125 Gene3D G3DSA:1.10.1660.10 2 123 2.4E-24 T 14-10-2018 Amir_2001 dc4f2aa3515efdec0195e4f9de5bc663 659 Pfam PF07582 AP endonuclease family 2 C terminus 606 656 2.0E-9 T 14-10-2018 IPR011418 AP endonuclease, family 2, C-terminal Amir_2001 dc4f2aa3515efdec0195e4f9de5bc663 659 SUPERFAMILY SSF51658 360 650 9.67E-41 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Amir_2001 dc4f2aa3515efdec0195e4f9de5bc663 659 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 109 243 5.6E-10 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Amir_2001 dc4f2aa3515efdec0195e4f9de5bc663 659 SUPERFAMILY SSF53067 113 283 4.02E-26 T 14-10-2018 Amir_2001 dc4f2aa3515efdec0195e4f9de5bc663 659 Gene3D G3DSA:3.30.420.40 17 288 1.4E-33 T 14-10-2018 Amir_2001 dc4f2aa3515efdec0195e4f9de5bc663 659 Gene3D G3DSA:3.30.420.40 110 284 1.4E-33 T 14-10-2018 Amir_2001 dc4f2aa3515efdec0195e4f9de5bc663 659 Pfam PF01261 Xylose isomerase-like TIM barrel 361 584 5.7E-25 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Amir_2001 dc4f2aa3515efdec0195e4f9de5bc663 659 Gene3D G3DSA:3.20.20.150 357 649 2.9E-55 T 14-10-2018 Amir_1460 18c0bea75531cc7b0742e9ca368c7506 607 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 32 44 4.3E-17 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 Amir_1460 18c0bea75531cc7b0742e9ca368c7506 607 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 83 99 4.3E-17 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 Amir_1460 18c0bea75531cc7b0742e9ca368c7506 607 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 560 575 4.3E-17 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 Amir_1460 18c0bea75531cc7b0742e9ca368c7506 607 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 48 58 4.3E-17 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 Amir_1460 18c0bea75531cc7b0742e9ca368c7506 607 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 241 257 4.3E-17 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 Amir_1460 18c0bea75531cc7b0742e9ca368c7506 607 SUPERFAMILY SSF49785 461 597 1.13E-36 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_1460 18c0bea75531cc7b0742e9ca368c7506 607 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 62 362 5.8E-64 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 Amir_1460 18c0bea75531cc7b0742e9ca368c7506 607 SUPERFAMILY SSF53474 30 412 7.73E-73 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1460 18c0bea75531cc7b0742e9ca368c7506 607 Gene3D G3DSA:2.60.120.260 446 595 2.9E-41 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_1460 18c0bea75531cc7b0742e9ca368c7506 607 SMART SM00939 377 592 7.0E-47 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 Amir_1460 18c0bea75531cc7b0742e9ca368c7506 607 Gene3D G3DSA:3.40.50.1820 300 425 5.7E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1460 18c0bea75531cc7b0742e9ca368c7506 607 Gene3D G3DSA:3.40.50.1820 46 277 6.1E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1460 18c0bea75531cc7b0742e9ca368c7506 607 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 389 589 5.7E-42 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 Amir_1463 bf4c1d5d961f44dbccceaf08d9170727 320 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 318 3.8E-114 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Amir_1463 bf4c1d5d961f44dbccceaf08d9170727 320 Gene3D G3DSA:3.90.25.10 170 299 1.4E-116 T 14-10-2018 Amir_1463 bf4c1d5d961f44dbccceaf08d9170727 320 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 246 5.7E-58 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_1463 bf4c1d5d961f44dbccceaf08d9170727 320 SUPERFAMILY SSF51735 2 315 3.82E-89 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1463 bf4c1d5d961f44dbccceaf08d9170727 320 Gene3D G3DSA:3.40.50.720 4 246 1.4E-116 T 14-10-2018 Amir_1791 f1c1b89ca5f59442c7694ad266b7d86a 913 Gene3D G3DSA:2.60.40.290 803 912 3.3E-36 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_1791 f1c1b89ca5f59442c7694ad266b7d86a 913 SMART SM00637 810 910 7.5E-48 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_1791 f1c1b89ca5f59442c7694ad266b7d86a 913 SUPERFAMILY SSF110296 471 774 1.57E-34 T 14-10-2018 Amir_1791 f1c1b89ca5f59442c7694ad266b7d86a 913 SUPERFAMILY SSF110296 58 462 1.83E-79 T 14-10-2018 Amir_1791 f1c1b89ca5f59442c7694ad266b7d86a 913 SUPERFAMILY SSF49384 805 910 6.49E-34 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_1791 f1c1b89ca5f59442c7694ad266b7d86a 913 Gene3D G3DSA:2.130.10.10 67 479 2.1E-295 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_1791 f1c1b89ca5f59442c7694ad266b7d86a 913 Pfam PF00553 Cellulose binding domain 810 910 4.7E-32 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_1791 f1c1b89ca5f59442c7694ad266b7d86a 913 Gene3D G3DSA:2.130.10.10 58 770 2.1E-295 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_0799 067db5aeeb651e371c5bfd61c1c6d6ed 381 Pfam PF01883 Iron-sulfur cluster assembly protein 11 83 2.6E-19 T 14-10-2018 IPR002744 MIP18 family-like Amir_0799 067db5aeeb651e371c5bfd61c1c6d6ed 381 Gene3D G3DSA:3.40.50.300 111 361 2.7E-70 T 14-10-2018 Amir_0799 067db5aeeb651e371c5bfd61c1c6d6ed 381 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 117 362 5.1E-89 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Amir_0799 067db5aeeb651e371c5bfd61c1c6d6ed 381 SUPERFAMILY SSF52540 116 365 9.22E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0799 067db5aeeb651e371c5bfd61c1c6d6ed 381 ProSitePatterns PS01215 Mrp family signature. 221 237 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 Amir_0799 067db5aeeb651e371c5bfd61c1c6d6ed 381 Hamap MF_02040 Iron-sulfur cluster carrier protein. 108 363 33.87 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Amir_0799 067db5aeeb651e371c5bfd61c1c6d6ed 381 Gene3D G3DSA:3.30.300.130 8 101 2.0E-21 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Amir_0799 067db5aeeb651e371c5bfd61c1c6d6ed 381 SUPERFAMILY SSF117916 10 100 5.56E-23 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Amir_2258 f925a920aff6ce8e5a888d602d8af4a4 376 Pfam PF00557 Metallopeptidase family M24 155 357 1.6E-57 T 14-10-2018 IPR000994 Peptidase M24 Amir_2258 f925a920aff6ce8e5a888d602d8af4a4 376 SUPERFAMILY SSF55920 146 374 6.41E-71 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Amir_2258 f925a920aff6ce8e5a888d602d8af4a4 376 Gene3D G3DSA:3.90.230.10 145 376 1.4E-76 T 14-10-2018 Amir_2258 f925a920aff6ce8e5a888d602d8af4a4 376 Pfam PF01321 Creatinase/Prolidase N-terminal domain 16 147 4.0E-12 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Amir_2258 f925a920aff6ce8e5a888d602d8af4a4 376 SUPERFAMILY SSF53092 7 145 5.23E-19 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Amir_2258 f925a920aff6ce8e5a888d602d8af4a4 376 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 304 316 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Amir_2258 f925a920aff6ce8e5a888d602d8af4a4 376 Gene3D G3DSA:3.40.350.10 4 144 1.6E-33 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Amir_6972 f2d48a75dfbed337b85cebd0fa310090 421 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 420 1.5E-113 T 14-10-2018 IPR002155 Thiolase GO:0016747 Amir_6972 f2d48a75dfbed337b85cebd0fa310090 421 SUPERFAMILY SSF53901 300 421 1.68E-29 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_6972 f2d48a75dfbed337b85cebd0fa310090 421 PIRSF PIRSF000429 2 421 1.4E-99 T 14-10-2018 IPR002155 Thiolase GO:0016747 Amir_6972 f2d48a75dfbed337b85cebd0fa310090 421 SUPERFAMILY SSF53901 7 280 4.32E-56 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_6972 f2d48a75dfbed337b85cebd0fa310090 421 Gene3D G3DSA:3.40.47.10 1 421 1.7E-99 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_6972 f2d48a75dfbed337b85cebd0fa310090 421 Pfam PF02803 Thiolase, C-terminal domain 291 421 1.9E-28 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Amir_6972 f2d48a75dfbed337b85cebd0fa310090 421 Pfam PF00108 Thiolase, N-terminal domain 7 273 6.3E-46 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Amir_5467 d0f674c8f3750dff4b38a9de417ac6f0 943 Gene3D G3DSA:1.25.40.10 480 659 6.5E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5467 d0f674c8f3750dff4b38a9de417ac6f0 943 SUPERFAMILY SSF48452 589 790 1.24E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5467 d0f674c8f3750dff4b38a9de417ac6f0 943 Gene3D G3DSA:1.25.40.10 660 744 2.0E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5467 d0f674c8f3750dff4b38a9de417ac6f0 943 SMART SM00028 551 584 350.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5467 d0f674c8f3750dff4b38a9de417ac6f0 943 SMART SM00028 667 700 250.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5467 d0f674c8f3750dff4b38a9de417ac6f0 943 SMART SM00028 708 741 0.048 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5467 d0f674c8f3750dff4b38a9de417ac6f0 943 SMART SM00028 767 800 220.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5467 d0f674c8f3750dff4b38a9de417ac6f0 943 Gene3D G3DSA:1.25.40.10 745 932 7.9E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2175 b6788253220e2e57d33b3f7e2e6af015 102 Pfam PF03091 CutA1 divalent ion tolerance protein 1 99 1.6E-35 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 Amir_2175 b6788253220e2e57d33b3f7e2e6af015 102 SUPERFAMILY SSF54913 2 100 3.04E-35 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Amir_2175 b6788253220e2e57d33b3f7e2e6af015 102 Gene3D G3DSA:3.30.70.120 1 102 7.5E-37 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Amir_5285 caf0055a365353b08632d6e73db60400 281 Pfam PF00149 Calcineurin-like phosphoesterase 6 240 2.8E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amir_5285 caf0055a365353b08632d6e73db60400 281 SUPERFAMILY SSF56300 6 263 3.95E-24 T 14-10-2018 Amir_5285 caf0055a365353b08632d6e73db60400 281 Gene3D G3DSA:3.60.21.10 6 258 4.9E-11 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Amir_0376 a095d1517009e6e17cd1f9b09c59694f 520 SMART SM00283 317 517 3.4E-11 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_0376 a095d1517009e6e17cd1f9b09c59694f 520 Gene3D G3DSA:3.30.450.40 209 332 3.7E-20 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_0376 a095d1517009e6e17cd1f9b09c59694f 520 SMART SM00065 213 364 3.2E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_0376 a095d1517009e6e17cd1f9b09c59694f 520 SMART SM00065 41 192 0.0033 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_0376 a095d1517009e6e17cd1f9b09c59694f 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 382 503 1.2E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_0376 a095d1517009e6e17cd1f9b09c59694f 520 SUPERFAMILY SSF55781 44 191 4.58E-17 T 14-10-2018 Amir_0376 a095d1517009e6e17cd1f9b09c59694f 520 SUPERFAMILY SSF58104 338 518 2.22E-43 T 14-10-2018 Amir_0376 a095d1517009e6e17cd1f9b09c59694f 520 Gene3D G3DSA:3.30.450.40 15 194 4.4E-20 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_0376 a095d1517009e6e17cd1f9b09c59694f 520 Gene3D G3DSA:1.10.287.950 333 519 9.6E-41 T 14-10-2018 Amir_0376 a095d1517009e6e17cd1f9b09c59694f 520 Pfam PF13185 GAF domain 211 354 4.9E-16 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_0376 a095d1517009e6e17cd1f9b09c59694f 520 Pfam PF13185 GAF domain 41 183 5.8E-17 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_0376 a095d1517009e6e17cd1f9b09c59694f 520 SUPERFAMILY SSF55781 198 358 9.38E-19 T 14-10-2018 Amir_4964 41e856717494139459408a415caa65c7 794 Pfam PF01095 Pectinesterase 200 483 1.0E-49 T 14-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 Amir_4964 41e856717494139459408a415caa65c7 794 SUPERFAMILY SSF51126 194 489 9.82E-65 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_4964 41e856717494139459408a415caa65c7 794 Gene3D G3DSA:2.80.10.50 52 100 1.1E-10 T 14-10-2018 Amir_4964 41e856717494139459408a415caa65c7 794 Gene3D G3DSA:2.80.10.50 101 191 3.7E-23 T 14-10-2018 Amir_4964 41e856717494139459408a415caa65c7 794 Gene3D G3DSA:2.160.20.10 500 792 4.6E-82 T 14-10-2018 IPR012334 Pectin lyase fold Amir_4964 41e856717494139459408a415caa65c7 794 SUPERFAMILY SSF50370 56 192 6.37E-39 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_4964 41e856717494139459408a415caa65c7 794 SMART SM00656 518 732 1.4E-10 T 14-10-2018 IPR002022 Pectate lyase Amir_4964 41e856717494139459408a415caa65c7 794 Gene3D G3DSA:2.160.20.10 193 495 2.9E-86 T 14-10-2018 IPR012334 Pectin lyase fold Amir_4964 41e856717494139459408a415caa65c7 794 SMART SM00710 316 337 8800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_4964 41e856717494139459408a415caa65c7 794 SMART SM00710 259 291 9600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_4964 41e856717494139459408a415caa65c7 794 SMART SM00710 693 715 1500.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_4964 41e856717494139459408a415caa65c7 794 SMART SM00710 620 641 1800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_4964 41e856717494139459408a415caa65c7 794 SMART SM00710 585 619 1.5 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_4964 41e856717494139459408a415caa65c7 794 SUPERFAMILY SSF51126 506 790 3.93E-66 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_4964 41e856717494139459408a415caa65c7 794 Pfam PF00652 Ricin-type beta-trefoil lectin domain 62 188 7.6E-20 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4964 41e856717494139459408a415caa65c7 794 ProSitePatterns PS00503 Pectinesterase signature 2. 348 357 - T 14-10-2018 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 Amir_4964 41e856717494139459408a415caa65c7 794 SMART SM00458 58 191 4.0E-24 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4964 41e856717494139459408a415caa65c7 794 Pfam PF00544 Pectate lyase 557 724 7.3E-20 T 14-10-2018 IPR002022 Pectate lyase Amir_4011 2c73dc2ec34c4f019ba1ccd254f68df6 213 SUPERFAMILY SSF49329 87 209 1.57E-11 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Amir_4011 2c73dc2ec34c4f019ba1ccd254f68df6 213 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 83 207 7.3E-11 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Amir_4011 2c73dc2ec34c4f019ba1ccd254f68df6 213 Gene3D G3DSA:2.60.40.200 57 210 6.3E-14 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Amir_0295 c98eab1d3c2cf20b2fbddf1df937910a 297 Gene3D G3DSA:3.90.550.10 3 209 4.0E-26 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0295 c98eab1d3c2cf20b2fbddf1df937910a 297 SUPERFAMILY SSF53448 26 188 7.82E-18 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Gene3D G3DSA:3.60.21.10 195 306 2.4E-9 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Gene3D G3DSA:2.130.10.10 1619 1754 3.5E-21 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SUPERFAMILY SSF50978 1422 1698 1.19E-75 T 14-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SUPERFAMILY SSF50494 5 182 1.18E-16 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Gene3D G3DSA:2.130.10.10 1493 1618 4.8E-44 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1395 1409 - T 14-10-2018 IPR019775 WD40 repeat, conserved site Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1518 1532 - T 14-10-2018 IPR019775 WD40 repeat, conserved site Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SUPERFAMILY SSF141571 1033 1107 4.19E-15 T 14-10-2018 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF00400 WD domain, G-beta repeat 1289 1325 2.5E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF00400 WD domain, G-beta repeat 1424 1448 0.016 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF00400 WD domain, G-beta repeat 1662 1694 4.2E-6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF00400 WD domain, G-beta repeat 1576 1612 9.3E-6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF00400 WD domain, G-beta repeat 1457 1489 0.0023 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF00400 WD domain, G-beta repeat 1335 1366 0.012 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF00400 WD domain, G-beta repeat 1618 1660 0.002 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF00400 WD domain, G-beta repeat 1371 1408 2.4E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF00400 WD domain, G-beta repeat 1538 1572 1.5E-8 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF00400 WD domain, G-beta repeat 1247 1284 0.2 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF00400 WD domain, G-beta repeat 1495 1531 3.3E-7 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF00400 WD domain, G-beta repeat 1170 1202 7.1E-7 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF00400 WD domain, G-beta repeat 1207 1243 2.7E-6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Gene3D G3DSA:2.40.10.120 8 188 2.8E-8 T 14-10-2018 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SUPERFAMILY SSF50978 1173 1489 1.52E-78 T 14-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Gene3D G3DSA:2.130.10.10 1246 1492 7.9E-72 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SUPERFAMILY SSF52540 626 805 6.1E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Gene3D G3DSA:2.130.10.10 1104 1245 2.0E-32 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF00149 Calcineurin-like phosphoesterase 204 319 5.0E-5 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF00805 Pentapeptide repeats (8 copies) 1033 1061 7.1E-4 T 14-10-2018 IPR001646 Pentapeptide repeat Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF00805 Pentapeptide repeats (8 copies) 1066 1096 1.2E-5 T 14-10-2018 IPR001646 Pentapeptide repeat Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Pfam PF05729 NACHT domain 639 797 7.0E-10 T 14-10-2018 IPR007111 NACHT nucleoside triphosphatase Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 Gene3D G3DSA:2.160.20.100 1023 1103 1.8E-16 T 14-10-2018 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SUPERFAMILY SSF56300 217 399 7.12E-13 T 14-10-2018 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SMART SM00320 1369 1408 8.1E-8 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SMART SM00320 1656 1695 8.5E-10 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SMART SM00320 1328 1367 2.1E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SMART SM00320 1122 1161 240.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SMART SM00320 1451 1490 9.0E-7 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SMART SM00320 1287 1326 1.8E-7 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SMART SM00320 1533 1572 1.9E-11 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SMART SM00320 1246 1285 2.7E-6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SMART SM00320 1164 1203 1.1E-8 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SMART SM00320 1492 1531 3.6E-11 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SMART SM00320 1574 1613 2.3E-9 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SMART SM00320 1615 1654 0.0011 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SMART SM00320 1410 1449 8.9E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6431 6d4aac09503b068cbb35933bc9ed142b 1766 SMART SM00320 1205 1244 7.1E-9 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_6430 2b13930cf28f5ba2ae4f7c8c8dc6e1c1 998 Pfam PF13365 Trypsin-like peptidase domain 16 115 4.2E-8 T 14-10-2018 Amir_6430 2b13930cf28f5ba2ae4f7c8c8dc6e1c1 998 Gene3D G3DSA:2.160.20.100 902 989 2.2E-12 T 14-10-2018 Amir_6430 2b13930cf28f5ba2ae4f7c8c8dc6e1c1 998 Pfam PF00805 Pentapeptide repeats (8 copies) 912 943 9.4E-6 T 14-10-2018 IPR001646 Pentapeptide repeat Amir_6430 2b13930cf28f5ba2ae4f7c8c8dc6e1c1 998 SUPERFAMILY SSF52540 507 714 1.47E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6430 2b13930cf28f5ba2ae4f7c8c8dc6e1c1 998 Gene3D G3DSA:2.40.10.10 42 140 2.8E-6 T 14-10-2018 Amir_6430 2b13930cf28f5ba2ae4f7c8c8dc6e1c1 998 SUPERFAMILY SSF141571 912 972 4.19E-11 T 14-10-2018 Amir_6430 2b13930cf28f5ba2ae4f7c8c8dc6e1c1 998 SUPERFAMILY SSF56300 170 300 6.58E-7 T 14-10-2018 Amir_6430 2b13930cf28f5ba2ae4f7c8c8dc6e1c1 998 SUPERFAMILY SSF50494 20 149 5.95E-10 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_6430 2b13930cf28f5ba2ae4f7c8c8dc6e1c1 998 Pfam PF05729 NACHT domain 523 676 5.0E-10 T 14-10-2018 IPR007111 NACHT nucleoside triphosphatase Amir_3059 57138bbc27fb6882c326993366d7e4b0 417 Gene3D G3DSA:1.10.630.10 24 416 3.8E-101 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3059 57138bbc27fb6882c326993366d7e4b0 417 SUPERFAMILY SSF48264 25 415 3.14E-71 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3059 57138bbc27fb6882c326993366d7e4b0 417 Pfam PF00067 Cytochrome P450 224 276 1.5E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3059 57138bbc27fb6882c326993366d7e4b0 417 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 355 364 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_3059 57138bbc27fb6882c326993366d7e4b0 417 PRINTS PR00359 B-class P450 signature 156 172 2.8E-33 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3059 57138bbc27fb6882c326993366d7e4b0 417 PRINTS PR00359 B-class P450 signature 353 362 2.8E-33 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3059 57138bbc27fb6882c326993366d7e4b0 417 PRINTS PR00359 B-class P450 signature 211 233 2.8E-33 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3059 57138bbc27fb6882c326993366d7e4b0 417 PRINTS PR00359 B-class P450 signature 362 373 2.8E-33 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3059 57138bbc27fb6882c326993366d7e4b0 417 PRINTS PR00359 B-class P450 signature 309 336 2.8E-33 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3059 57138bbc27fb6882c326993366d7e4b0 417 PRINTS PR00359 B-class P450 signature 110 121 2.8E-33 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2253 37e9eaa669df419a28771e10e1597bbc 312 Gene3D G3DSA:3.40.50.10330 8 135 3.1E-22 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Amir_2253 37e9eaa669df419a28771e10e1597bbc 312 Pfam PF00781 Diacylglycerol kinase catalytic domain 16 136 1.1E-20 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Amir_2253 37e9eaa669df419a28771e10e1597bbc 312 SUPERFAMILY SSF111331 15 298 5.89E-62 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Amir_2253 37e9eaa669df419a28771e10e1597bbc 312 SMART SM00046 15 136 3.4E-5 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Amir_2253 37e9eaa669df419a28771e10e1597bbc 312 Gene3D G3DSA:2.60.200.40 136 293 6.0E-36 T 14-10-2018 Amir_5247 a610392990b03c632eef297e5c038cd8 162 Gene3D G3DSA:1.10.260.40 1 70 1.3E-32 T 14-10-2018 Amir_5247 a610392990b03c632eef297e5c038cd8 162 Pfam PF01381 Helix-turn-helix 12 68 7.4E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_5247 a610392990b03c632eef297e5c038cd8 162 SUPERFAMILY SSF47413 4 71 2.03E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_5247 a610392990b03c632eef297e5c038cd8 162 Gene3D G3DSA:1.10.10.1930 75 162 1.3E-33 T 14-10-2018 IPR038099 BldD-like, C-terminal domain superfamily Amir_5247 a610392990b03c632eef297e5c038cd8 162 SMART SM00530 11 68 3.3E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_4955 071c08da69e31d5cc0e508e94456f34a 218 SUPERFAMILY SSF48498 112 206 5.17E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4955 071c08da69e31d5cc0e508e94456f34a 218 Gene3D G3DSA:1.10.357.10 39 213 2.1E-43 T 14-10-2018 Amir_4955 071c08da69e31d5cc0e508e94456f34a 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 66 89 3.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4955 071c08da69e31d5cc0e508e94456f34a 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 58 3.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4955 071c08da69e31d5cc0e508e94456f34a 218 SUPERFAMILY SSF46689 44 107 1.33E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4955 071c08da69e31d5cc0e508e94456f34a 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 45 89 1.2E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6003 b03b4cd1032807a24913f780606b70b1 314 SUPERFAMILY SSF53254 135 282 2.14E-16 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_6003 b03b4cd1032807a24913f780606b70b1 314 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_6003 b03b4cd1032807a24913f780606b70b1 314 SMART SM00855 136 251 5.2E-8 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_6003 b03b4cd1032807a24913f780606b70b1 314 SUPERFAMILY SSF55811 7 129 3.11E-28 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_6003 b03b4cd1032807a24913f780606b70b1 314 Pfam PF00293 NUDIX domain 10 125 1.1E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_6003 b03b4cd1032807a24913f780606b70b1 314 Gene3D G3DSA:3.40.50.1240 135 295 1.1E-28 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_6003 b03b4cd1032807a24913f780606b70b1 314 Gene3D G3DSA:3.90.79.10 8 131 2.9E-31 T 14-10-2018 Amir_6003 b03b4cd1032807a24913f780606b70b1 314 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_6003 b03b4cd1032807a24913f780606b70b1 314 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_6003 b03b4cd1032807a24913f780606b70b1 314 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 137 217 1.4E-10 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_3398 f49a4b89d62bfe30cee8adb012e68ccb 130 SUPERFAMILY SSF54637 13 126 7.65E-11 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_3398 f49a4b89d62bfe30cee8adb012e68ccb 130 Gene3D G3DSA:3.10.129.10 5 130 6.4E-21 T 14-10-2018 Amir_5429 a2ebff0da7da05b87efd1383975f9060 322 Pfam PF13614 AAA domain 72 248 9.2E-62 T 14-10-2018 IPR025669 AAA domain Amir_5429 a2ebff0da7da05b87efd1383975f9060 322 Gene3D G3DSA:3.40.50.300 66 322 1.0E-82 T 14-10-2018 Amir_5429 a2ebff0da7da05b87efd1383975f9060 322 SUPERFAMILY SSF52540 71 321 1.44E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3232 eb361ba7d0f30364ef308e8ce77daf0e 33 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 10 33 9.1E-11 T 14-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 Amir_3232 eb361ba7d0f30364ef308e8ce77daf0e 33 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 10 33 1.3E-10 T 14-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 Amir_2767 52690e1647eb9a820465a41397b78580 715 SUPERFAMILY SSF48452 500 694 8.53E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2767 52690e1647eb9a820465a41397b78580 715 SUPERFAMILY SSF52540 47 305 2.25E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2767 52690e1647eb9a820465a41397b78580 715 PRINTS PR00364 Disease resistance protein signature 158 172 1.6E-7 T 14-10-2018 Amir_2767 52690e1647eb9a820465a41397b78580 715 PRINTS PR00364 Disease resistance protein signature 245 259 1.6E-7 T 14-10-2018 Amir_2767 52690e1647eb9a820465a41397b78580 715 PRINTS PR00364 Disease resistance protein signature 80 95 1.6E-7 T 14-10-2018 Amir_2767 52690e1647eb9a820465a41397b78580 715 Gene3D G3DSA:1.25.40.10 499 712 2.2E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2767 52690e1647eb9a820465a41397b78580 715 Gene3D G3DSA:3.40.50.300 43 202 2.7E-22 T 14-10-2018 Amir_2767 52690e1647eb9a820465a41397b78580 715 Pfam PF14938 Soluble NSF attachment protein, SNAP 552 690 2.9E-6 T 14-10-2018 Amir_3805 925d49f2140e1b66e283c892cb121c14 407 PRINTS PR00409 Phthalate dioxygenase reductase family signature 247 261 9.6E-8 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 Amir_3805 925d49f2140e1b66e283c892cb121c14 407 PRINTS PR00409 Phthalate dioxygenase reductase family signature 269 288 9.6E-8 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 Amir_3805 925d49f2140e1b66e283c892cb121c14 407 PRINTS PR00409 Phthalate dioxygenase reductase family signature 355 363 9.6E-8 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 Amir_3805 925d49f2140e1b66e283c892cb121c14 407 Pfam PF00042 Globin 7 104 1.2E-8 T 14-10-2018 IPR000971 Globin GO:0020037 Amir_3805 925d49f2140e1b66e283c892cb121c14 407 Gene3D G3DSA:2.40.30.10 154 260 6.6E-23 T 14-10-2018 Amir_3805 925d49f2140e1b66e283c892cb121c14 407 Gene3D G3DSA:1.10.490.10 1 147 3.6E-51 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Amir_3805 925d49f2140e1b66e283c892cb121c14 407 SUPERFAMILY SSF46458 1 132 2.49E-34 T 14-10-2018 IPR009050 Globin-like superfamily Amir_3805 925d49f2140e1b66e283c892cb121c14 407 Gene3D G3DSA:3.40.50.80 261 393 1.3E-27 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amir_3805 925d49f2140e1b66e283c892cb121c14 407 SUPERFAMILY SSF52343 263 388 1.57E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amir_3805 925d49f2140e1b66e283c892cb121c14 407 Pfam PF00175 Oxidoreductase NAD-binding domain 272 369 9.6E-10 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Amir_3805 925d49f2140e1b66e283c892cb121c14 407 SUPERFAMILY SSF63380 157 260 6.27E-19 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 379 4.6E-38 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 SUPERFAMILY SSF52151 521 801 9.16E-51 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 Gene3D G3DSA:3.30.70.3290 445 863 1.9E-112 T 14-10-2018 Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 Pfam PF00698 Acyl transferase domain 523 784 1.8E-36 T 14-10-2018 IPR014043 Acyl transferase Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 SUPERFAMILY SSF55048 640 700 1.96E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 SUPERFAMILY SSF51735 887 1100 2.36E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 524 812 6.1E-65 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 Gene3D G3DSA:3.40.47.10 9 432 1.7E-148 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 Pfam PF00550 Phosphopantetheine attachment site 1415 1477 1.9E-17 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 Gene3D G3DSA:3.40.366.10 522 818 1.9E-112 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 Pfam PF08659 KR domain 1113 1302 7.2E-40 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 SMART SM00823 Phosphopantetheine attachment site 1412 1481 3.0E-13 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1113 1303 3.0E-31 T 14-10-2018 Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 SUPERFAMILY SSF47336 1404 1477 2.75E-20 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 Gene3D G3DSA:3.40.50.720 864 1392 3.3E-90 T 14-10-2018 Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 382 495 7.4E-20 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 12 253 1.1E-62 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 Gene3D G3DSA:3.40.50.1820 1401 1497 8.9E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 SUPERFAMILY SSF53901 9 428 3.52E-77 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 166 182 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 SMART SM00825 Beta-ketoacyl synthase 14 432 6.4E-156 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_3682 d8ffb2c186ef161fa473e88eee899981 1497 SUPERFAMILY SSF51735 1111 1329 9.03E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4700 fab8b180921425161380f1e4609d07d4 179 Pfam PF01613 Flavin reductase like domain 30 178 4.4E-36 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amir_4700 fab8b180921425161380f1e4609d07d4 179 SMART SM00903 30 177 3.5E-53 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amir_4700 fab8b180921425161380f1e4609d07d4 179 SUPERFAMILY SSF50475 21 178 2.4E-48 T 14-10-2018 Amir_4700 fab8b180921425161380f1e4609d07d4 179 Gene3D G3DSA:2.30.110.10 12 179 7.0E-53 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_1011 670a0eddeb40a6030e4a0e3fa935995f 316 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Amir_1011 670a0eddeb40a6030e4a0e3fa935995f 316 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 286 2.8E-63 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amir_1011 670a0eddeb40a6030e4a0e3fa935995f 316 SUPERFAMILY SSF53686 4 296 6.42E-82 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amir_1011 670a0eddeb40a6030e4a0e3fa935995f 316 Gene3D G3DSA:3.40.50.1100 40 159 4.0E-98 T 14-10-2018 Amir_1011 670a0eddeb40a6030e4a0e3fa935995f 316 Gene3D G3DSA:3.40.50.1100 8 295 4.0E-98 T 14-10-2018 Amir_1011 670a0eddeb40a6030e4a0e3fa935995f 316 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 299 4.0E-104 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Amir_1562 4d0966c4f0f344a7bfda83c0ada50031 288 TIGRFAM TIGR04222 near_uncomplex: TIGR04222 domain 7 177 3.2E-18 T 14-10-2018 IPR026467 Ser/Gly rich, Cys interspersed, C-terminal domain Amir_3615 7dcf78b2f37cec6ac8efb198ea07f649 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 233 270 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_3615 7dcf78b2f37cec6ac8efb198ea07f649 426 Gene3D G3DSA:3.40.640.10 74 318 5.1E-113 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_3615 7dcf78b2f37cec6ac8efb198ea07f649 426 Gene3D G3DSA:3.90.1150.10 18 415 5.1E-113 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_3615 7dcf78b2f37cec6ac8efb198ea07f649 426 SUPERFAMILY SSF53383 37 417 2.89E-94 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_3615 7dcf78b2f37cec6ac8efb198ea07f649 426 Pfam PF00202 Aminotransferase class-III 45 415 1.0E-78 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_1906 bd8435802295f2eda5d4341cc5b7cf08 349 Gene3D G3DSA:3.40.109.10 17 114 4.0E-35 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_1906 bd8435802295f2eda5d4341cc5b7cf08 349 SUPERFAMILY SSF55469 19 93 7.85E-10 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_1906 bd8435802295f2eda5d4341cc5b7cf08 349 Pfam PF00881 Nitroreductase family 132 314 1.2E-5 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amir_1906 bd8435802295f2eda5d4341cc5b7cf08 349 SUPERFAMILY SSF55469 122 329 3.14E-12 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_1906 bd8435802295f2eda5d4341cc5b7cf08 349 Gene3D G3DSA:3.40.109.10 119 337 1.8E-56 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_3492 2ce849e4b4eb8201742118598826b5bd 157 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_3492 2ce849e4b4eb8201742118598826b5bd 157 SUPERFAMILY SSF55811 13 132 1.49E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_3492 2ce849e4b4eb8201742118598826b5bd 157 Pfam PF00293 NUDIX domain 12 124 6.8E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_3492 2ce849e4b4eb8201742118598826b5bd 157 Gene3D G3DSA:3.90.79.10 10 130 1.0E-19 T 14-10-2018 Amir_5535 4fe12cf1c286b2333b63f865e6244815 234 Gene3D G3DSA:3.40.50.300 1 234 5.5E-63 T 14-10-2018 Amir_5535 4fe12cf1c286b2333b63f865e6244815 234 SMART SM00382 27 210 5.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5535 4fe12cf1c286b2333b63f865e6244815 234 Pfam PF00005 ABC transporter 18 161 2.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5535 4fe12cf1c286b2333b63f865e6244815 234 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_5535 4fe12cf1c286b2333b63f865e6244815 234 SUPERFAMILY SSF52540 2 231 9.02E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5535 4fe12cf1c286b2333b63f865e6244815 234 PIRSF PIRSF039137 1 234 7.8E-107 T 14-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 SUPERFAMILY SSF55785 116 208 4.54E-8 T 14-10-2018 IPR035965 PAS domain superfamily Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 Gene3D G3DSA:3.30.450.20 231 353 2.4E-9 T 14-10-2018 Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 SUPERFAMILY SSF55785 344 469 4.54E-13 T 14-10-2018 IPR035965 PAS domain superfamily Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 Pfam PF00989 PAS fold 117 163 2.8E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 SUPERFAMILY SSF47384 477 558 3.53E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 SMART SM00091 97 169 3.0 T 14-10-2018 IPR000014 PAS domain Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 SMART SM00091 359 429 0.89 T 14-10-2018 IPR000014 PAS domain Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 SMART SM00091 232 299 5.3 T 14-10-2018 IPR000014 PAS domain Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 Gene3D G3DSA:3.30.450.20 354 476 1.8E-13 T 14-10-2018 Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 114 199 7.9E-7 T 14-10-2018 IPR000014 PAS domain Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 Pfam PF00512 His Kinase A (phospho-acceptor) domain 492 558 9.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 Gene3D G3DSA:3.30.450.20 114 220 4.2E-10 T 14-10-2018 Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 SMART SM00388 491 558 2.8E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 Pfam PF08448 PAS fold 366 472 3.3E-5 T 14-10-2018 IPR013656 PAS fold-4 Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 Pfam PF08448 PAS fold 240 347 5.8E-6 T 14-10-2018 IPR013656 PAS fold-4 Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 Gene3D G3DSA:1.10.287.130 478 560 6.9E-18 T 14-10-2018 Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 Gene3D G3DSA:3.30.565.10 564 719 2.0E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 SUPERFAMILY SSF55785 235 347 8.72E-8 T 14-10-2018 IPR035965 PAS domain superfamily Amir_2366 f1b3f27d435257d48dfec3e07920220d 722 SUPERFAMILY SSF55874 547 716 5.33E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4141 e24230d0535e5f8be926fd94c5154e15 782 Gene3D G3DSA:1.10.510.10 137 297 2.1E-7 T 14-10-2018 Amir_4141 e24230d0535e5f8be926fd94c5154e15 782 SUPERFAMILY SSF56112 57 227 1.91E-13 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_5430 64c06bb9e6116f3f555caeb06ff8a840 110 SUPERFAMILY SSF46785 8 93 1.54E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5430 64c06bb9e6116f3f555caeb06ff8a840 110 SMART SM00418 16 93 3.6E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_5430 64c06bb9e6116f3f555caeb06ff8a840 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 9.0E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_5430 64c06bb9e6116f3f555caeb06ff8a840 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 9.0E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_5430 64c06bb9e6116f3f555caeb06ff8a840 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 9.0E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_5430 64c06bb9e6116f3f555caeb06ff8a840 110 Gene3D G3DSA:1.10.10.10 5 109 8.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5430 64c06bb9e6116f3f555caeb06ff8a840 110 Pfam PF12840 Helix-turn-helix domain 17 69 2.8E-10 T 14-10-2018 Amir_6807 c10c61715709ae6cc60e7de2efdca7ab 361 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amir_6807 c10c61715709ae6cc60e7de2efdca7ab 361 SUPERFAMILY SSF50129 3 192 8.37E-52 T 14-10-2018 IPR011032 GroES-like superfamily Amir_6807 c10c61715709ae6cc60e7de2efdca7ab 361 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 152 4.2E-22 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_6807 c10c61715709ae6cc60e7de2efdca7ab 361 Gene3D G3DSA:3.40.50.720 173 300 1.4E-114 T 14-10-2018 Amir_6807 c10c61715709ae6cc60e7de2efdca7ab 361 SUPERFAMILY SSF51735 158 321 2.24E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6807 c10c61715709ae6cc60e7de2efdca7ab 361 Pfam PF00107 Zinc-binding dehydrogenase 196 314 4.2E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_6807 c10c61715709ae6cc60e7de2efdca7ab 361 SMART SM00829 14 354 2.6E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_6807 c10c61715709ae6cc60e7de2efdca7ab 361 Gene3D G3DSA:3.90.180.10 9 351 1.4E-114 T 14-10-2018 Amir_2626 7f414102f4c92cf307bed1f3b08c2626 381 Gene3D G3DSA:3.40.190.10 150 246 1.1E-37 T 14-10-2018 Amir_2626 7f414102f4c92cf307bed1f3b08c2626 381 SUPERFAMILY SSF53850 69 279 6.79E-16 T 14-10-2018 Amir_2626 7f414102f4c92cf307bed1f3b08c2626 381 Gene3D G3DSA:3.40.190.10 72 342 1.1E-37 T 14-10-2018 Amir_2626 7f414102f4c92cf307bed1f3b08c2626 381 Pfam PF09084 NMT1/THI5 like 79 281 5.2E-27 T 14-10-2018 IPR015168 SsuA/THI5-like Amir_3345 ae5fcfc09f1aab22868048627cc3f052 262 Pfam PF12697 Alpha/beta hydrolase family 26 252 4.7E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_3345 ae5fcfc09f1aab22868048627cc3f052 262 SUPERFAMILY SSF53474 6 259 1.44E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3345 ae5fcfc09f1aab22868048627cc3f052 262 Gene3D G3DSA:3.40.50.1820 3 262 1.3E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6415 7204a1190981d4ad78a0f5b190a6ddad 391 Pfam PF07687 Peptidase dimerisation domain 169 262 1.2E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Amir_6415 7204a1190981d4ad78a0f5b190a6ddad 391 Gene3D G3DSA:3.40.630.10 22 363 1.9E-121 T 14-10-2018 Amir_6415 7204a1190981d4ad78a0f5b190a6ddad 391 SUPERFAMILY SSF53187 9 372 4.89E-59 T 14-10-2018 Amir_6415 7204a1190981d4ad78a0f5b190a6ddad 391 Pfam PF01546 Peptidase family M20/M25/M40 84 328 8.5E-9 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Amir_6415 7204a1190981d4ad78a0f5b190a6ddad 391 SUPERFAMILY SSF55031 170 274 4.34E-20 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amir_6415 7204a1190981d4ad78a0f5b190a6ddad 391 PIRSF PIRSF037226 2 385 3.3E-139 T 14-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted Amir_6415 7204a1190981d4ad78a0f5b190a6ddad 391 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 346 8.8E-58 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Amir_6415 7204a1190981d4ad78a0f5b190a6ddad 391 Gene3D G3DSA:3.30.70.360 166 283 1.9E-121 T 14-10-2018 Amir_2301 7c91525ea7dc69e731195626a7663467 413 Gene3D G3DSA:3.30.43.10 1 63 1.0E-21 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Amir_2301 7c91525ea7dc69e731195626a7663467 413 Gene3D G3DSA:3.30.465.10 70 276 1.9E-82 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amir_2301 7c91525ea7dc69e731195626a7663467 413 Gene3D G3DSA:3.30.70.2520 278 371 1.0E-34 T 14-10-2018 Amir_2301 7c91525ea7dc69e731195626a7663467 413 SUPERFAMILY SSF56176 3 171 1.07E-29 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amir_2301 7c91525ea7dc69e731195626a7663467 413 Gene3D G3DSA:1.10.45.10 374 407 6.6E-6 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Amir_2301 7c91525ea7dc69e731195626a7663467 413 Pfam PF01565 FAD binding domain 17 142 2.1E-17 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Amir_2301 7c91525ea7dc69e731195626a7663467 413 Gene3D G3DSA:3.30.70.2530 174 259 1.9E-82 T 14-10-2018 Amir_2301 7c91525ea7dc69e731195626a7663467 413 Pfam PF04030 D-arabinono-1,4-lactone oxidase 280 403 3.5E-19 T 14-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 Amir_2301 7c91525ea7dc69e731195626a7663467 413 PIRSF PIRSF000136 277 410 1.2E-7 T 14-10-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 Amir_2301 7c91525ea7dc69e731195626a7663467 413 PIRSF PIRSF000136 1 230 4.6E-35 T 14-10-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 Amir_0307 82ddaa2ec3f020bc2cea52ddcc62c9cc 167 Gene3D G3DSA:3.90.80.10 1 162 4.3E-65 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Amir_0307 82ddaa2ec3f020bc2cea52ddcc62c9cc 167 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 1 158 32.141 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Amir_0307 82ddaa2ec3f020bc2cea52ddcc62c9cc 167 SUPERFAMILY SSF50324 3 158 1.96E-56 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Amir_0307 82ddaa2ec3f020bc2cea52ddcc62c9cc 167 Pfam PF00719 Inorganic pyrophosphatase 5 157 1.8E-52 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Amir_0307 82ddaa2ec3f020bc2cea52ddcc62c9cc 167 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 52 58 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Amir_1210 8c99ab6efa5ecaa5e77b520339059eeb 87 SUPERFAMILY SSF47598 5 52 3.28E-9 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Amir_1210 8c99ab6efa5ecaa5e77b520339059eeb 87 Gene3D G3DSA:1.10.1220.10 1 49 2.9E-6 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Amir_3896 48cc167388d470800869bf71627745d8 483 SUPERFAMILY SSF56601 3 333 1.22E-53 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_3896 48cc167388d470800869bf71627745d8 483 Gene3D G3DSA:3.40.710.10 2 338 1.3E-56 T 14-10-2018 Amir_3896 48cc167388d470800869bf71627745d8 483 Pfam PF00144 Beta-lactamase 15 333 1.7E-44 T 14-10-2018 IPR001466 Beta-lactamase-related Amir_4511 d7a73604e028961d28302ff53fd92e55 226 SMART SM00421 154 211 6.5E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4511 d7a73604e028961d28302ff53fd92e55 226 SUPERFAMILY SSF46894 141 217 1.9E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4511 d7a73604e028961d28302ff53fd92e55 226 SUPERFAMILY SSF52172 3 129 2.7E-33 T 14-10-2018 IPR011006 CheY-like superfamily Amir_4511 d7a73604e028961d28302ff53fd92e55 226 Pfam PF00072 Response regulator receiver domain 5 119 3.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4511 d7a73604e028961d28302ff53fd92e55 226 SMART SM00448 3 118 5.0E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4511 d7a73604e028961d28302ff53fd92e55 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 9.7E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4511 d7a73604e028961d28302ff53fd92e55 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 9.7E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4511 d7a73604e028961d28302ff53fd92e55 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 9.7E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4511 d7a73604e028961d28302ff53fd92e55 226 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4511 d7a73604e028961d28302ff53fd92e55 226 Gene3D G3DSA:3.40.50.12740 3 217 2.3E-66 T 14-10-2018 Amir_4511 d7a73604e028961d28302ff53fd92e55 226 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 211 3.3E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6947 7ea933d2637112230d5f41601b1392f3 398 SUPERFAMILY SSF49493 141 289 1.09E-19 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Amir_6947 7ea933d2637112230d5f41601b1392f3 398 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 10 377 2.9E-117 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Amir_6947 7ea933d2637112230d5f41601b1392f3 398 Gene3D G3DSA:2.60.260.20 145 277 2.2E-33 T 14-10-2018 Amir_6947 7ea933d2637112230d5f41601b1392f3 398 Pfam PF01556 DnaJ C terminal domain 148 360 1.6E-37 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal Amir_6947 7ea933d2637112230d5f41601b1392f3 398 SUPERFAMILY SSF49493 287 371 1.1E-19 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Amir_6947 7ea933d2637112230d5f41601b1392f3 398 SMART SM00271 9 67 2.3E-25 T 14-10-2018 IPR001623 DnaJ domain Amir_6947 7ea933d2637112230d5f41601b1392f3 398 SUPERFAMILY SSF46565 9 114 9.94E-29 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Amir_6947 7ea933d2637112230d5f41601b1392f3 398 Gene3D G3DSA:2.10.230.10 175 235 2.2E-33 T 14-10-2018 Amir_6947 7ea933d2637112230d5f41601b1392f3 398 Pfam PF00684 DnaJ central domain 175 235 2.8E-11 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Amir_6947 7ea933d2637112230d5f41601b1392f3 398 Gene3D G3DSA:1.10.287.110 7 118 3.3E-28 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Amir_6947 7ea933d2637112230d5f41601b1392f3 398 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 7 398 36.548 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Amir_6947 7ea933d2637112230d5f41601b1392f3 398 PRINTS PR00625 DnaJ domain signature 47 67 8.9E-22 T 14-10-2018 IPR001623 DnaJ domain Amir_6947 7ea933d2637112230d5f41601b1392f3 398 PRINTS PR00625 DnaJ domain signature 67 86 8.9E-22 T 14-10-2018 IPR001623 DnaJ domain Amir_6947 7ea933d2637112230d5f41601b1392f3 398 PRINTS PR00625 DnaJ domain signature 30 45 8.9E-22 T 14-10-2018 IPR001623 DnaJ domain Amir_6947 7ea933d2637112230d5f41601b1392f3 398 PRINTS PR00625 DnaJ domain signature 12 30 8.9E-22 T 14-10-2018 IPR001623 DnaJ domain Amir_6947 7ea933d2637112230d5f41601b1392f3 398 SUPERFAMILY SSF57938 162 237 3.14E-18 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Amir_6947 7ea933d2637112230d5f41601b1392f3 398 Gene3D G3DSA:2.60.260.20 282 388 2.7E-26 T 14-10-2018 Amir_6947 7ea933d2637112230d5f41601b1392f3 398 Pfam PF00226 DnaJ domain 10 72 1.3E-24 T 14-10-2018 IPR001623 DnaJ domain Amir_1331 851de3c92a1d8573121b889ae50c4576 448 SUPERFAMILY SSF53850 47 421 8.89E-52 T 14-10-2018 Amir_1331 851de3c92a1d8573121b889ae50c4576 448 Pfam PF01547 Bacterial extracellular solute-binding protein 59 359 5.3E-21 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_1331 851de3c92a1d8573121b889ae50c4576 448 Gene3D G3DSA:3.40.190.10 173 429 4.6E-62 T 14-10-2018 Amir_1331 851de3c92a1d8573121b889ae50c4576 448 Gene3D G3DSA:3.40.190.10 63 396 4.6E-62 T 14-10-2018 Amir_0176 dab424eaa35701693b794ddcae5467e9 91 SUPERFAMILY SSF57938 26 65 1.57E-5 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Amir_2414 0f7e8a653b81fc3849a161d4e01b2423 325 Gene3D G3DSA:3.40.109.10 2 104 5.6E-40 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_2414 0f7e8a653b81fc3849a161d4e01b2423 325 SUPERFAMILY SSF55469 5 322 1.0E-12 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_2414 0f7e8a653b81fc3849a161d4e01b2423 325 Gene3D G3DSA:3.40.109.10 105 324 2.7E-44 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_0421 c2cdf26ff159e232ac281359e9ee5440 189 SUPERFAMILY SSF48498 81 179 2.95E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_0421 c2cdf26ff159e232ac281359e9ee5440 189 SUPERFAMILY SSF46689 6 78 7.98E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0421 c2cdf26ff159e232ac281359e9ee5440 189 Gene3D G3DSA:1.10.357.10 1 189 2.5E-59 T 14-10-2018 Amir_0421 c2cdf26ff159e232ac281359e9ee5440 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 6.1E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0421 c2cdf26ff159e232ac281359e9ee5440 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 7.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0421 c2cdf26ff159e232ac281359e9ee5440 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 7.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1350 8aff835e45ff73cb80d4d7d5acd3a075 573 SUPERFAMILY SSF52777 328 564 8.45E-73 T 14-10-2018 Amir_1350 8aff835e45ff73cb80d4d7d5acd3a075 573 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 336 564 4.9E-69 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Amir_1350 8aff835e45ff73cb80d4d7d5acd3a075 573 Gene3D G3DSA:4.10.320.10 267 308 2.3E-15 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Amir_1350 8aff835e45ff73cb80d4d7d5acd3a075 573 Pfam PF02817 e3 binding domain 266 300 2.7E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Amir_1350 8aff835e45ff73cb80d4d7d5acd3a075 573 SUPERFAMILY SSF51230 1 95 1.44E-27 T 14-10-2018 IPR011053 Single hybrid motif Amir_1350 8aff835e45ff73cb80d4d7d5acd3a075 573 TIGRFAM TIGR02927 SucB_Actino: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 1 573 2.1E-262 T 14-10-2018 IPR014276 2-oxoglutarate dehydrogenase, E2 component KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 Amir_1350 8aff835e45ff73cb80d4d7d5acd3a075 573 SUPERFAMILY SSF51230 126 218 1.83E-26 T 14-10-2018 IPR011053 Single hybrid motif Amir_1350 8aff835e45ff73cb80d4d7d5acd3a075 573 Gene3D G3DSA:2.40.50.100 2 101 1.3E-28 T 14-10-2018 Amir_1350 8aff835e45ff73cb80d4d7d5acd3a075 573 Gene3D G3DSA:2.40.50.100 121 227 1.2E-25 T 14-10-2018 Amir_1350 8aff835e45ff73cb80d4d7d5acd3a075 573 Pfam PF00364 Biotin-requiring enzyme 127 199 5.2E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Amir_1350 8aff835e45ff73cb80d4d7d5acd3a075 573 Pfam PF00364 Biotin-requiring enzyme 5 76 4.3E-22 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Amir_1350 8aff835e45ff73cb80d4d7d5acd3a075 573 SUPERFAMILY SSF47005 260 304 7.32E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Amir_1350 8aff835e45ff73cb80d4d7d5acd3a075 573 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Amir_1350 8aff835e45ff73cb80d4d7d5acd3a075 573 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 150 179 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Amir_1350 8aff835e45ff73cb80d4d7d5acd3a075 573 Gene3D G3DSA:3.30.559.10 315 569 1.2E-77 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_2759 2abe3747e0b1a5ebc88b832cda4232ad 256 SMART SM00382 47 233 5.8E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2759 2abe3747e0b1a5ebc88b832cda4232ad 256 Gene3D G3DSA:3.40.50.300 17 253 1.4E-68 T 14-10-2018 Amir_2759 2abe3747e0b1a5ebc88b832cda4232ad 256 Pfam PF00005 ABC transporter 38 184 6.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2759 2abe3747e0b1a5ebc88b832cda4232ad 256 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_2759 2abe3747e0b1a5ebc88b832cda4232ad 256 SUPERFAMILY SSF52540 20 237 1.5E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4730 a507756930d704d5a4662ac9854e528b 433 SMART SM00941 340 414 1.4E-30 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_4730 a507756930d704d5a4662ac9854e528b 433 SUPERFAMILY SSF52418 76 322 7.72E-80 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_4730 a507756930d704d5a4662ac9854e528b 433 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 413 2.0E-19 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_4730 a507756930d704d5a4662ac9854e528b 433 PIRSF PIRSF000478 6 423 2.7E-148 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_4730 a507756930d704d5a4662ac9854e528b 433 Gene3D G3DSA:1.20.970.10 6 73 5.4E-23 T 14-10-2018 Amir_4730 a507756930d704d5a4662ac9854e528b 433 SUPERFAMILY SSF54680 327 418 1.26E-22 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_4730 a507756930d704d5a4662ac9854e528b 433 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 10 413 7.9E-159 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_4730 a507756930d704d5a4662ac9854e528b 433 Pfam PF02885 Glycosyl transferase family, helical bundle domain 11 72 4.4E-17 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_4730 a507756930d704d5a4662ac9854e528b 433 SUPERFAMILY SSF47648 7 75 1.31E-20 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_4730 a507756930d704d5a4662ac9854e528b 433 Gene3D G3DSA:3.40.1030.10 84 325 8.1E-130 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_4730 a507756930d704d5a4662ac9854e528b 433 Pfam PF00591 Glycosyl transferase family, a/b domain 83 294 1.3E-28 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_4730 a507756930d704d5a4662ac9854e528b 433 Gene3D G3DSA:3.90.1170.30 326 415 8.1E-130 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_4730 a507756930d704d5a4662ac9854e528b 433 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 116 131 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_4212 c02de76aacc89aed67a5ce7bf05c13c4 241 SMART SM00450 124 221 7.8E-13 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_4212 c02de76aacc89aed67a5ce7bf05c13c4 241 SUPERFAMILY SSF52821 121 228 2.36E-22 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_4212 c02de76aacc89aed67a5ce7bf05c13c4 241 Gene3D G3DSA:3.40.250.10 107 224 2.6E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_4212 c02de76aacc89aed67a5ce7bf05c13c4 241 ProSitePatterns PS00380 Rhodanese signature 1. 149 160 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Amir_4212 c02de76aacc89aed67a5ce7bf05c13c4 241 Pfam PF00581 Rhodanese-like domain 127 217 2.0E-11 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_4212 c02de76aacc89aed67a5ce7bf05c13c4 241 Gene3D G3DSA:1.10.1200.10 5 105 2.2E-7 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4212 c02de76aacc89aed67a5ce7bf05c13c4 241 SUPERFAMILY SSF47336 7 98 5.89E-7 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2077 25818bd8104bbf10dae82fa58c9870c6 233 SUPERFAMILY SSF52317 31 228 9.7E-36 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_2077 25818bd8104bbf10dae82fa58c9870c6 233 Gene3D G3DSA:3.40.50.880 5 231 4.6E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_2077 25818bd8104bbf10dae82fa58c9870c6 233 Pfam PF07722 Peptidase C26 8 212 4.6E-56 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 Amir_4962 8215e9d16bf50d0cc10a1d01bedd5ef5 196 Gene3D G3DSA:1.10.10.60 6 52 1.1E-16 T 14-10-2018 Amir_4962 8215e9d16bf50d0cc10a1d01bedd5ef5 196 Gene3D G3DSA:1.10.357.10 54 187 2.3E-33 T 14-10-2018 Amir_4962 8215e9d16bf50d0cc10a1d01bedd5ef5 196 SUPERFAMILY SSF46689 3 77 8.21E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4962 8215e9d16bf50d0cc10a1d01bedd5ef5 196 SUPERFAMILY SSF48498 84 187 3.85E-21 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4962 8215e9d16bf50d0cc10a1d01bedd5ef5 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 60 2.9E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4962 8215e9d16bf50d0cc10a1d01bedd5ef5 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.3E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4962 8215e9d16bf50d0cc10a1d01bedd5ef5 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.3E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6090 d7368459e6b1a86b72bbaafe27c42db3 347 ProSitePatterns PS00356 LacI-type HTH domain signature. 21 39 - T 14-10-2018 Amir_6090 d7368459e6b1a86b72bbaafe27c42db3 347 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 20 30 1.1E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_6090 d7368459e6b1a86b72bbaafe27c42db3 347 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 30 40 1.1E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_6090 d7368459e6b1a86b72bbaafe27c42db3 347 Pfam PF13377 Periplasmic binding protein-like domain 186 342 2.7E-29 T 14-10-2018 Amir_6090 d7368459e6b1a86b72bbaafe27c42db3 347 SUPERFAMILY SSF53822 77 337 6.09E-59 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_6090 d7368459e6b1a86b72bbaafe27c42db3 347 Gene3D G3DSA:3.40.50.2300 80 335 6.9E-64 T 14-10-2018 Amir_6090 d7368459e6b1a86b72bbaafe27c42db3 347 SMART SM00354 18 89 1.0E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_6090 d7368459e6b1a86b72bbaafe27c42db3 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 20 65 4.5E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_6090 d7368459e6b1a86b72bbaafe27c42db3 347 Gene3D G3DSA:3.40.50.2300 178 340 6.9E-64 T 14-10-2018 Amir_6090 d7368459e6b1a86b72bbaafe27c42db3 347 Gene3D G3DSA:1.10.260.40 16 75 6.6E-22 T 14-10-2018 Amir_6090 d7368459e6b1a86b72bbaafe27c42db3 347 SUPERFAMILY SSF47413 17 76 1.36E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2563 01aa153522c2a888c6b8a1e015c8efb2 259 SUPERFAMILY SSF51126 47 220 2.9E-55 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_2563 01aa153522c2a888c6b8a1e015c8efb2 259 Pfam PF03211 Pectate lyase 33 234 1.2E-82 T 14-10-2018 IPR004898 Pectate lyase PlyH/PlyE-like GO:0005576|GO:0030570 KEGG: 00040+4.2.2.2 Amir_2563 01aa153522c2a888c6b8a1e015c8efb2 259 Gene3D G3DSA:2.160.20.10 43 258 3.1E-76 T 14-10-2018 IPR012334 Pectin lyase fold Amir_4936 b8fa15a92693af72bce2b08f0207bddc 278 Gene3D G3DSA:1.10.530.10 176 277 5.4E-10 T 14-10-2018 Amir_4936 b8fa15a92693af72bce2b08f0207bddc 278 SUPERFAMILY SSF53955 186 275 3.75E-15 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Amir_4936 b8fa15a92693af72bce2b08f0207bddc 278 Pfam PF01464 Transglycosylase SLT domain 185 264 8.5E-13 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 Amir_3742 f9e5fb2eb1ade426e8246a097d753308 137 SUPERFAMILY SSF55874 25 132 1.16E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3742 f9e5fb2eb1ade426e8246a097d753308 137 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 39 132 4.0E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_3742 f9e5fb2eb1ade426e8246a097d753308 137 Gene3D G3DSA:3.30.565.10 12 136 1.2E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3742 f9e5fb2eb1ade426e8246a097d753308 137 SMART SM00387 38 137 6.9E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4232 e8da0d3ee3d3349604c7a51cb66c5f62 159 Pfam PF16571 FBP C-terminal treble-clef zinc-finger 8 157 3.1E-59 T 14-10-2018 IPR032330 Elongation factor G-binding protein, C-terminal treble-clef zinc-finger Amir_0433 5c63c1c7ac11dba0ae127391253d47d2 174 SUPERFAMILY SSF88946 2 91 1.88E-11 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_0433 5c63c1c7ac11dba0ae127391253d47d2 174 Gene3D G3DSA:1.10.10.10 82 156 2.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0433 5c63c1c7ac11dba0ae127391253d47d2 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 155 1.3E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_0433 5c63c1c7ac11dba0ae127391253d47d2 174 Pfam PF04545 Sigma-70, region 4 104 153 6.2E-13 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amir_0433 5c63c1c7ac11dba0ae127391253d47d2 174 Pfam PF04542 Sigma-70 region 2 18 75 3.2E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_0433 5c63c1c7ac11dba0ae127391253d47d2 174 Gene3D G3DSA:1.10.1740.10 2 78 8.6E-9 T 14-10-2018 Amir_0433 5c63c1c7ac11dba0ae127391253d47d2 174 SUPERFAMILY SSF88659 99 156 5.61E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_0433 5c63c1c7ac11dba0ae127391253d47d2 174 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 3 155 1.7E-42 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 Amir_5120 8955b6ead052f7f36063ea5ce3d0533b 288 Pfam PF01551 Peptidase family M23 182 277 2.2E-30 T 14-10-2018 IPR016047 Peptidase M23 Amir_5120 8955b6ead052f7f36063ea5ce3d0533b 288 Gene3D G3DSA:2.70.70.10 133 284 1.4E-44 T 14-10-2018 IPR011055 Duplicated hybrid motif Amir_5120 8955b6ead052f7f36063ea5ce3d0533b 288 SUPERFAMILY SSF51261 132 281 9.94E-49 T 14-10-2018 IPR011055 Duplicated hybrid motif Amir_4172 b237b771929da831ec367cf5ccb26216 249 Gene3D G3DSA:1.10.10.10 4 77 1.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4172 b237b771929da831ec367cf5ccb26216 249 Gene3D G3DSA:3.30.450.40 78 241 3.8E-32 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_4172 b237b771929da831ec367cf5ccb26216 249 Pfam PF01614 Bacterial transcriptional regulator 124 240 5.8E-14 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Amir_4172 b237b771929da831ec367cf5ccb26216 249 Pfam PF09339 IclR helix-turn-helix domain 7 57 1.7E-11 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_4172 b237b771929da831ec367cf5ccb26216 249 SUPERFAMILY SSF55781 63 245 5.56E-32 T 14-10-2018 Amir_4172 b237b771929da831ec367cf5ccb26216 249 SUPERFAMILY SSF46785 7 78 3.14E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4172 b237b771929da831ec367cf5ccb26216 249 SMART SM00346 5 95 1.4E-8 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_3837 1437a75b0eff54657a1022e2abbed50d 290 Gene3D G3DSA:3.20.20.150 18 270 2.1E-49 T 14-10-2018 Amir_3837 1437a75b0eff54657a1022e2abbed50d 290 Pfam PF01261 Xylose isomerase-like TIM barrel 40 235 6.8E-29 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Amir_3837 1437a75b0eff54657a1022e2abbed50d 290 SUPERFAMILY SSF51658 34 277 2.35E-42 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Amir_6691 5afe00554b595b6f59c0063d04223273 96 Gene3D G3DSA:3.10.20.520 2 66 2.2E-31 T 14-10-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B Amir_6691 5afe00554b595b6f59c0063d04223273 96 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 7 95 9.7E-45 T 14-10-2018 IPR009359 Phenylacetic acid degradation B Amir_6691 5afe00554b595b6f59c0063d04223273 96 PIRSF PIRSF030200 1 96 5.8E-44 T 14-10-2018 IPR009359 Phenylacetic acid degradation B Amir_6691 5afe00554b595b6f59c0063d04223273 96 Pfam PF06243 Phenylacetic acid degradation B 7 92 4.7E-39 T 14-10-2018 IPR009359 Phenylacetic acid degradation B Amir_0019 f0b44ef83d91c29efec4d41564bd5be7 448 SUPERFAMILY SSF51971 307 442 2.12E-6 T 14-10-2018 Amir_0019 f0b44ef83d91c29efec4d41564bd5be7 448 Gene3D G3DSA:3.40.50.720 7 442 1.0E-143 T 14-10-2018 Amir_0019 f0b44ef83d91c29efec4d41564bd5be7 448 PIRSF PIRSF000362 1 448 3.5E-163 T 14-10-2018 IPR021163 Ferredoxin-NADP+ reductase, adrenodoxin-type GO:0016491|GO:0055114 Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Amir_0019 f0b44ef83d91c29efec4d41564bd5be7 448 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 178 7.7E-10 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_0019 f0b44ef83d91c29efec4d41564bd5be7 448 Gene3D G3DSA:3.50.50.60 48 322 1.0E-143 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0019 f0b44ef83d91c29efec4d41564bd5be7 448 PRINTS PR00419 Adrenodoxin reductase family signature 31 44 1.8E-21 T 14-10-2018 Amir_0019 f0b44ef83d91c29efec4d41564bd5be7 448 PRINTS PR00419 Adrenodoxin reductase family signature 74 84 1.8E-21 T 14-10-2018 Amir_0019 f0b44ef83d91c29efec4d41564bd5be7 448 PRINTS PR00419 Adrenodoxin reductase family signature 6 28 1.8E-21 T 14-10-2018 Amir_0019 f0b44ef83d91c29efec4d41564bd5be7 448 PRINTS PR00419 Adrenodoxin reductase family signature 145 159 1.8E-21 T 14-10-2018 Amir_0019 f0b44ef83d91c29efec4d41564bd5be7 448 SUPERFAMILY SSF51971 4 317 1.59E-58 T 14-10-2018 Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 115 8.7E-32 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 Gene3D G3DSA:2.40.50.100 588 655 2.3E-16 T 14-10-2018 Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 SUPERFAMILY SSF56059 88 335 5.13E-59 T 14-10-2018 Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 SUPERFAMILY SSF52440 2 118 1.53E-31 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 SUPERFAMILY SSF51246 335 450 6.28E-36 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 SUPERFAMILY SSF52096 1293 1499 4.62E-22 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 158 172 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 Pfam PF02785 Biotin carboxylase C-terminal domain 340 449 2.4E-35 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 SMART SM00878 340 448 3.7E-51 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 Pfam PF00364 Biotin-requiring enzyme 589 654 3.1E-9 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 292 299 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 328 4.8E-62 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 Pfam PF01039 Carboxyl transferase domain 1332 1821 8.8E-32 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 Gene3D G3DSA:3.90.226.10 1515 1826 3.0E-58 T 14-10-2018 Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 Gene3D G3DSA:3.30.470.130 1 452 1.9E-169 T 14-10-2018 Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 Pfam PF08326 Acetyl-CoA carboxylase, central region 1047 1207 4.1E-16 T 14-10-2018 IPR013537 Acetyl-CoA carboxylase, central domain GO:0003989|GO:0005524|GO:0006633 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-163765|Reactome: R-HSA-196780|Reactome: R-HSA-200425|Reactome: R-HSA-2426168 Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 Gene3D G3DSA:3.90.226.10 1254 1505 2.8E-34 T 14-10-2018 Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 SUPERFAMILY SSF51230 582 655 1.07E-15 T 14-10-2018 IPR011053 Single hybrid motif Amir_4238 8c49c3cdbe2b991467a35da57e2d9b9e 1827 SUPERFAMILY SSF52096 1514 1825 1.16E-38 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_5255 4d3d64f83254602c7558787a14770ed7 399 ProSitePatterns PS00789 Chorismate synthase signature 3. 344 360 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amir_5255 4d3d64f83254602c7558787a14770ed7 399 SUPERFAMILY SSF103263 2 392 5.23E-131 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amir_5255 4d3d64f83254602c7558787a14770ed7 399 Gene3D G3DSA:3.60.150.10 1 398 6.5E-151 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amir_5255 4d3d64f83254602c7558787a14770ed7 399 TIGRFAM TIGR00033 aroC: chorismate synthase 2 375 1.1E-118 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amir_5255 4d3d64f83254602c7558787a14770ed7 399 ProSitePatterns PS00788 Chorismate synthase signature 2. 134 150 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amir_5255 4d3d64f83254602c7558787a14770ed7 399 Pfam PF01264 Chorismate synthase 2 370 1.1E-111 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amir_5255 4d3d64f83254602c7558787a14770ed7 399 ProSitePatterns PS00787 Chorismate synthase signature 1. 8 23 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amir_5255 4d3d64f83254602c7558787a14770ed7 399 PIRSF PIRSF001456 1 390 2.9E-119 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amir_5255 4d3d64f83254602c7558787a14770ed7 399 Hamap MF_00300 Chorismate synthase [aroC]. 2 377 33.456 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1157 1171 - T 14-10-2018 IPR019775 WD40 repeat, conserved site Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 PRINTS PR00320 G protein beta WD-40 repeat signature 1020 1034 3.2E-8 T 14-10-2018 IPR020472 G-protein beta WD-40 repeat Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 PRINTS PR00320 G protein beta WD-40 repeat signature 708 722 3.2E-8 T 14-10-2018 IPR020472 G-protein beta WD-40 repeat Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 PRINTS PR00320 G protein beta WD-40 repeat signature 844 858 3.2E-8 T 14-10-2018 IPR020472 G-protein beta WD-40 repeat Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Pfam PF00400 WD domain, G-beta repeat 735 767 9.6E-8 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Pfam PF00400 WD domain, G-beta repeat 687 721 5.4E-6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Pfam PF00400 WD domain, G-beta repeat 873 903 1.5E-7 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Pfam PF00400 WD domain, G-beta repeat 1001 1033 0.021 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Pfam PF00400 WD domain, G-beta repeat 791 813 0.0011 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Pfam PF00400 WD domain, G-beta repeat 1183 1215 1.7E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Pfam PF00400 WD domain, G-beta repeat 822 857 3.5E-6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Pfam PF00400 WD domain, G-beta repeat 969 995 0.011 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Pfam PF00400 WD domain, G-beta repeat 920 949 1.0E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Pfam PF00400 WD domain, G-beta repeat 1137 1170 3.7E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Pfam PF00400 WD domain, G-beta repeat 1276 1306 1.0E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Pfam PF00400 WD domain, G-beta repeat 1229 1261 1.7E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Gene3D G3DSA:2.130.10.10 957 1038 2.3E-17 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Gene3D G3DSA:2.130.10.10 819 956 2.9E-44 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SUPERFAMILY SSF52540 143 379 8.8E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SMART SM00320 682 721 2.8E-8 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SMART SM00320 1131 1170 3.6E-6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SMART SM00320 1222 1261 5.3E-7 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SMART SM00320 1267 1307 3.4E-6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SMART SM00320 996 1033 1.4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SMART SM00320 864 903 9.9E-8 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SMART SM00320 1176 1215 3.3E-8 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SMART SM00320 773 813 3.1E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SMART SM00320 819 857 5.5E-10 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SMART SM00320 1093 1124 490.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SMART SM00320 910 949 1.9E-7 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SMART SM00320 728 767 1.0E-9 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SMART SM00320 1042 1080 7.4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SMART SM00320 956 995 0.0054 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 936 950 - T 14-10-2018 IPR019775 WD40 repeat, conserved site Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Gene3D G3DSA:2.130.10.10 672 818 4.4E-44 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Pfam PF13191 AAA ATPase domain 147 307 2.4E-8 T 14-10-2018 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 844 858 - T 14-10-2018 IPR019775 WD40 repeat, conserved site Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SUPERFAMILY SSF50978 682 997 5.13E-76 T 14-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1202 1216 - T 14-10-2018 IPR019775 WD40 repeat, conserved site Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 754 768 - T 14-10-2018 IPR019775 WD40 repeat, conserved site Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 890 904 - T 14-10-2018 IPR019775 WD40 repeat, conserved site Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 SUPERFAMILY SSF50998 999 1309 2.71E-60 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 800 814 - T 14-10-2018 IPR019775 WD40 repeat, conserved site Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1248 1262 - T 14-10-2018 IPR019775 WD40 repeat, conserved site Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1020 1034 - T 14-10-2018 IPR019775 WD40 repeat, conserved site Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Gene3D G3DSA:2.130.10.10 1039 1222 1.2E-38 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 Gene3D G3DSA:2.130.10.10 1223 1324 1.4E-21 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 708 722 - T 14-10-2018 IPR019775 WD40 repeat, conserved site Amir_0561 c0a96af97da541a5a9784cff85b70754 1344 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1111 1125 - T 14-10-2018 IPR019775 WD40 repeat, conserved site Amir_6798 0086caccbabcb2ae041511c5ce310081 739 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 208 710 6.1E-81 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 ProSitePatterns PS01229 Hypothetical cof family signature 2. 629 651 - T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 SUPERFAMILY SSF81665 173 704 2.62E-13 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 Pfam PF00702 haloacid dehalogenase-like hydrolase 430 643 2.3E-45 T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 Gene3D G3DSA:2.70.150.20 227 339 1.2E-33 T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 SUPERFAMILY SSF55008 5 76 1.06E-19 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 ProSitePatterns PS01047 Heavy-metal-associated domain. 15 43 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 Pfam PF00122 E1-E2 ATPase 237 412 2.2E-50 T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 Gene3D G3DSA:3.40.50.1000 415 681 1.4E-82 T 14-10-2018 IPR023214 HAD superfamily Amir_6798 0086caccbabcb2ae041511c5ce310081 739 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 199 732 1.3E-152 T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 652 664 3.0E-23 T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 554 565 3.0E-23 T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 284 298 3.0E-23 T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 576 586 3.0E-23 T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 648 3.0E-23 T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 434 448 3.0E-23 T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 203 731 6.6E-113 T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 Gene3D G3DSA:3.30.70.100 2 79 1.7E-20 T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 SUPERFAMILY SSF56784 432 729 4.28E-56 T 14-10-2018 IPR036412 HAD-like superfamily Amir_6798 0086caccbabcb2ae041511c5ce310081 739 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 436 442 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 PRINTS PR00943 Copper-transporting ATPase signature 204 223 2.5E-5 T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 PRINTS PR00943 Copper-transporting ATPase signature 357 371 2.5E-5 T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 PRINTS PR00943 Copper-transporting ATPase signature 417 432 2.5E-5 T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 PRINTS PR00943 Copper-transporting ATPase signature 606 623 2.5E-5 T 14-10-2018 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 Pfam PF00403 Heavy-metal-associated domain 13 70 3.4E-13 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 154 731 1.7E-173 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 Gene3D G3DSA:3.40.1110.10 445 561 1.4E-82 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Amir_6798 0086caccbabcb2ae041511c5ce310081 739 SUPERFAMILY SSF81653 240 334 1.44E-23 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Amir_0095 77eb90c49401ba96e241e3ced27866e5 1021 Pfam PF00664 ABC transporter transmembrane region 33 283 8.1E-20 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_0095 77eb90c49401ba96e241e3ced27866e5 1021 Gene3D G3DSA:1.20.1560.10 8 328 6.7E-35 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_0095 77eb90c49401ba96e241e3ced27866e5 1021 Pfam PF00005 ABC transporter 847 975 4.3E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0095 77eb90c49401ba96e241e3ced27866e5 1021 Gene3D G3DSA:1.20.1560.10 533 775 1.8E-9 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_0095 77eb90c49401ba96e241e3ced27866e5 1021 SUPERFAMILY SSF52540 331 513 6.25E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0095 77eb90c49401ba96e241e3ced27866e5 1021 Pfam PF00005 ABC transporter 355 475 2.5E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0095 77eb90c49401ba96e241e3ced27866e5 1021 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 28 513 1.6E-137 T 14-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 Amir_0095 77eb90c49401ba96e241e3ced27866e5 1021 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 533 1005 1.1E-118 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 Amir_0095 77eb90c49401ba96e241e3ced27866e5 1021 SUPERFAMILY SSF90123 23 328 1.57E-39 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_0095 77eb90c49401ba96e241e3ced27866e5 1021 SUPERFAMILY SSF52540 821 1018 4.21E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0095 77eb90c49401ba96e241e3ced27866e5 1021 SMART SM00382 854 1021 6.9E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0095 77eb90c49401ba96e241e3ced27866e5 1021 SMART SM00382 363 541 9.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0095 77eb90c49401ba96e241e3ced27866e5 1021 Gene3D G3DSA:3.40.50.300 806 1021 4.2E-58 T 14-10-2018 Amir_0095 77eb90c49401ba96e241e3ced27866e5 1021 Gene3D G3DSA:3.40.50.300 331 532 7.7E-49 T 14-10-2018 Amir_0095 77eb90c49401ba96e241e3ced27866e5 1021 SUPERFAMILY SSF90123 536 773 4.71E-20 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_0095 77eb90c49401ba96e241e3ced27866e5 1021 ProSitePatterns PS00211 ABC transporters family signature. 947 961 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_1758 999d520aafa6076faac5831c6f1b6d85 181 Gene3D G3DSA:1.10.10.10 98 174 1.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1758 999d520aafa6076faac5831c6f1b6d85 181 Gene3D G3DSA:3.30.70.1060 8 92 2.1E-9 T 14-10-2018 Amir_1758 999d520aafa6076faac5831c6f1b6d85 181 SUPERFAMILY SSF54909 8 90 3.22E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_1758 999d520aafa6076faac5831c6f1b6d85 181 Pfam PF00196 Bacterial regulatory proteins, luxR family 118 171 7.9E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1758 999d520aafa6076faac5831c6f1b6d85 181 SUPERFAMILY SSF46894 111 172 2.55E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_1758 999d520aafa6076faac5831c6f1b6d85 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 161 9.5E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1758 999d520aafa6076faac5831c6f1b6d85 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 133 149 9.5E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1758 999d520aafa6076faac5831c6f1b6d85 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 119 133 9.5E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1758 999d520aafa6076faac5831c6f1b6d85 181 SMART SM00421 116 173 1.1E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1758 999d520aafa6076faac5831c6f1b6d85 181 Pfam PF03795 YCII-related domain 17 88 1.5E-10 T 14-10-2018 IPR005545 YCII-related Amir_6548 8bc3db43b3e4d76c6a5af6fa5ad67ad8 232 Gene3D G3DSA:3.30.420.40 3 216 2.6E-41 T 14-10-2018 Amir_6548 8bc3db43b3e4d76c6a5af6fa5ad67ad8 232 Gene3D G3DSA:3.30.420.40 100 187 2.6E-41 T 14-10-2018 Amir_6548 8bc3db43b3e4d76c6a5af6fa5ad67ad8 232 SUPERFAMILY SSF53067 118 214 2.33E-11 T 14-10-2018 Amir_6548 8bc3db43b3e4d76c6a5af6fa5ad67ad8 232 SUPERFAMILY SSF53067 2 106 9.71E-21 T 14-10-2018 Amir_6548 8bc3db43b3e4d76c6a5af6fa5ad67ad8 232 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 216 3.1E-51 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 Amir_6548 8bc3db43b3e4d76c6a5af6fa5ad67ad8 232 Pfam PF00814 Glycoprotease family 37 154 2.7E-26 T 14-10-2018 IPR000905 Gcp-like domain Amir_6052 02a47c78df2592f2ba32e53c778693ef 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 5 278 1.4E-61 T 14-10-2018 IPR003797 DegV Amir_6052 02a47c78df2592f2ba32e53c778693ef 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 5 277 9.6E-65 T 14-10-2018 IPR003797 DegV Amir_6052 02a47c78df2592f2ba32e53c778693ef 280 Gene3D G3DSA:3.40.50.10170 2 151 1.9E-38 T 14-10-2018 Amir_6052 02a47c78df2592f2ba32e53c778693ef 280 SUPERFAMILY SSF82549 4 277 2.51E-60 T 14-10-2018 Amir_6052 02a47c78df2592f2ba32e53c778693ef 280 Gene3D G3DSA:3.30.1180.10 154 278 1.4E-31 T 14-10-2018 Amir_1554 b6138390e3f6a2aafa90caae6d3b9997 232 SUPERFAMILY SSF54909 5 228 6.97E-73 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_1554 b6138390e3f6a2aafa90caae6d3b9997 232 Pfam PF06778 Chlorite dismutase 34 221 1.9E-72 T 14-10-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase Amir_1554 b6138390e3f6a2aafa90caae6d3b9997 232 Gene3D G3DSA:3.30.70.1100 128 231 2.0E-35 T 14-10-2018 Amir_2150 00d4270caf3e58cb00ffa48df71a25cd 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 453 7.9E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2150 00d4270caf3e58cb00ffa48df71a25cd 456 SUPERFAMILY SSF55874 340 452 3.67E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2150 00d4270caf3e58cb00ffa48df71a25cd 456 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 296 9.8E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2150 00d4270caf3e58cb00ffa48df71a25cd 456 Gene3D G3DSA:1.10.287.130 183 299 3.1E-20 T 14-10-2018 Amir_2150 00d4270caf3e58cb00ffa48df71a25cd 456 SMART SM00387 349 454 3.2E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2150 00d4270caf3e58cb00ffa48df71a25cd 456 Gene3D G3DSA:3.30.565.10 320 452 1.2E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2150 00d4270caf3e58cb00ffa48df71a25cd 456 SMART SM00304 179 232 2.3E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_2150 00d4270caf3e58cb00ffa48df71a25cd 456 SMART SM00388 233 297 3.2E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2150 00d4270caf3e58cb00ffa48df71a25cd 456 SUPERFAMILY SSF47384 216 296 4.32E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_2150 00d4270caf3e58cb00ffa48df71a25cd 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 4.4E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2150 00d4270caf3e58cb00ffa48df71a25cd 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 4.4E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_6508 d199451e543118db67aa30fddcb8e398 389 Gene3D G3DSA:3.30.470.20 3 220 6.2E-80 T 14-10-2018 Amir_6508 d199451e543118db67aa30fddcb8e398 389 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 38.414 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Amir_6508 d199451e543118db67aa30fddcb8e398 389 SUPERFAMILY SSF52210 231 385 1.18E-41 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amir_6508 d199451e543118db67aa30fddcb8e398 389 Gene3D G3DSA:3.30.1490.20 21 96 6.2E-80 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amir_6508 d199451e543118db67aa30fddcb8e398 389 Pfam PF08442 ATP-grasp domain 2 194 1.9E-69 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Amir_6508 d199451e543118db67aa30fddcb8e398 389 PIRSF PIRSF001554 1 388 1.2E-139 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Amir_6508 d199451e543118db67aa30fddcb8e398 389 Gene3D G3DSA:3.40.50.261 232 387 1.1E-47 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amir_6508 d199451e543118db67aa30fddcb8e398 389 SUPERFAMILY SSF56059 3 228 5.4E-68 T 14-10-2018 Amir_6508 d199451e543118db67aa30fddcb8e398 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 2 385 4.0E-128 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Amir_6508 d199451e543118db67aa30fddcb8e398 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 249 273 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amir_6508 d199451e543118db67aa30fddcb8e398 389 Pfam PF00549 CoA-ligase 256 378 3.5E-13 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amir_1023 71242de1059684bfd672fbb46047486d 157 PIRSF PIRSF000239 1 157 2.5E-18 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amir_1023 71242de1059684bfd672fbb46047486d 157 Gene3D G3DSA:3.40.30.10 7 156 5.6E-48 T 14-10-2018 Amir_1023 71242de1059684bfd672fbb46047486d 157 Pfam PF00578 AhpC/TSA family 9 136 1.1E-37 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amir_1023 71242de1059684bfd672fbb46047486d 157 SUPERFAMILY SSF52833 5 156 2.8E-48 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_5657 bf1f690d7a4a27dfff3b2e0050cb1c74 693 SUPERFAMILY SSF53474 451 692 3.0E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5657 bf1f690d7a4a27dfff3b2e0050cb1c74 693 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 109 400 3.3E-36 T 14-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 Amir_5657 bf1f690d7a4a27dfff3b2e0050cb1c74 693 SUPERFAMILY SSF82171 20 395 1.44E-33 T 14-10-2018 Amir_5657 bf1f690d7a4a27dfff3b2e0050cb1c74 693 Pfam PF00326 Prolyl oligopeptidase family 495 692 1.4E-46 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Amir_5657 bf1f690d7a4a27dfff3b2e0050cb1c74 693 Gene3D G3DSA:3.40.50.1820 446 692 4.1E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5657 bf1f690d7a4a27dfff3b2e0050cb1c74 693 Gene3D G3DSA:2.140.10.30 10 443 5.5E-87 T 14-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily Amir_1426 11d2f633634a324f17f1ba7709b92ae8 623 Gene3D G3DSA:3.90.700.10 253 395 2.9E-150 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_1426 11d2f633634a324f17f1ba7709b92ae8 623 PIRSF PIRSF000171 1 602 4.9E-39 T 14-10-2018 Amir_1426 11d2f633634a324f17f1ba7709b92ae8 623 SUPERFAMILY SSF56425 243 389 3.89E-34 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_1426 11d2f633634a324f17f1ba7709b92ae8 623 Gene3D G3DSA:3.50.50.60 10 441 2.9E-150 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1426 11d2f633634a324f17f1ba7709b92ae8 623 SUPERFAMILY SSF46977 475 620 4.32E-40 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_1426 11d2f633634a324f17f1ba7709b92ae8 623 Pfam PF00890 FAD binding domain 10 429 5.2E-92 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_1426 11d2f633634a324f17f1ba7709b92ae8 623 Gene3D G3DSA:1.20.58.100 456 570 5.8E-29 T 14-10-2018 Amir_1426 11d2f633634a324f17f1ba7709b92ae8 623 SUPERFAMILY SSF51905 4 470 5.11E-71 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1426 11d2f633634a324f17f1ba7709b92ae8 623 Pfam PF02910 Fumarate reductase flavoprotein C-term 484 601 1.0E-22 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_1426 11d2f633634a324f17f1ba7709b92ae8 623 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 393 415 7.4E-9 T 14-10-2018 Amir_1426 11d2f633634a324f17f1ba7709b92ae8 623 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 7.4E-9 T 14-10-2018 Amir_1333 84360c56320064b43d509d02294b0851 919 SUPERFAMILY SSF52518 496 724 3.09E-88 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_1333 84360c56320064b43d509d02294b0851 919 SUPERFAMILY SSF52518 75 491 1.15E-130 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_1333 84360c56320064b43d509d02294b0851 919 Gene3D G3DSA:3.40.50.970 495 729 3.5E-105 T 14-10-2018 Amir_1333 84360c56320064b43d509d02294b0851 919 SUPERFAMILY SSF52922 726 905 2.57E-55 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_1333 84360c56320064b43d509d02294b0851 919 Gene3D G3DSA:3.40.50.920 731 912 2.7E-65 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_1333 84360c56320064b43d509d02294b0851 919 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 24 909 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Amir_1333 84360c56320064b43d509d02294b0851 919 PIRSF PIRSF000156 15 913 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Amir_1333 84360c56320064b43d509d02294b0851 919 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 155 323 2.3E-9 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_1333 84360c56320064b43d509d02294b0851 919 Gene3D G3DSA:3.40.50.970 74 494 2.2E-133 T 14-10-2018 Amir_6728 85b10df7259031278bd4beba0a0be30b 510 SUPERFAMILY SSF69618 238 489 6.15E-71 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amir_6728 85b10df7259031278bd4beba0a0be30b 510 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 203 1.6E-35 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Amir_6728 85b10df7259031278bd4beba0a0be30b 510 Gene3D G3DSA:3.30.950.10 120 234 1.3E-16 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Amir_6728 85b10df7259031278bd4beba0a0be30b 510 Gene3D G3DSA:3.40.50.10090 241 481 1.2E-50 T 14-10-2018 Amir_6728 85b10df7259031278bd4beba0a0be30b 510 SUPERFAMILY SSF53790 5 241 7.72E-46 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amir_6728 85b10df7259031278bd4beba0a0be30b 510 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 14 28 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Amir_6728 85b10df7259031278bd4beba0a0be30b 510 Pfam PF02602 Uroporphyrinogen-III synthase HemD 252 482 1.9E-65 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amir_6728 85b10df7259031278bd4beba0a0be30b 510 Gene3D G3DSA:3.40.1010.10 1 116 3.3E-23 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amir_6728 85b10df7259031278bd4beba0a0be30b 510 Gene3D G3DSA:3.40.50.10090 270 410 1.2E-50 T 14-10-2018 Amir_6657 a04dd397c393507811cdcac3aba46dea 196 Gene3D G3DSA:3.30.460.80 4 127 1.1E-14 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6657 a04dd397c393507811cdcac3aba46dea 196 SUPERFAMILY SSF143243 16 185 6.41E-33 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6657 a04dd397c393507811cdcac3aba46dea 196 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 28 146 4.0E-27 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6657 a04dd397c393507811cdcac3aba46dea 196 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 92 149 1.0E-10 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_3359 25a95409588dbcb5e988597aa850f0e8 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 134 7.6E-23 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_3359 25a95409588dbcb5e988597aa850f0e8 330 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amir_3359 25a95409588dbcb5e988597aa850f0e8 330 SMART SM00829 12 328 1.1E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_3359 25a95409588dbcb5e988597aa850f0e8 330 Pfam PF00107 Zinc-binding dehydrogenase 177 294 2.8E-13 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_3359 25a95409588dbcb5e988597aa850f0e8 330 SUPERFAMILY SSF51735 140 298 4.6E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3359 25a95409588dbcb5e988597aa850f0e8 330 SUPERFAMILY SSF50129 5 164 9.43E-40 T 14-10-2018 IPR011032 GroES-like superfamily Amir_3359 25a95409588dbcb5e988597aa850f0e8 330 Gene3D G3DSA:3.90.180.10 24 328 7.3E-99 T 14-10-2018 Amir_3359 25a95409588dbcb5e988597aa850f0e8 330 Gene3D G3DSA:3.40.50.720 151 300 7.3E-99 T 14-10-2018 Amir_2892 f51f79fe8c9389615fdffca3e90a8f0b 66 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 5 60 3.2E-13 T 14-10-2018 Amir_2892 f51f79fe8c9389615fdffca3e90a8f0b 66 PRINTS PR00352 3Fe-4S ferredoxin signature 5 16 6.3E-7 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Amir_2892 f51f79fe8c9389615fdffca3e90a8f0b 66 PRINTS PR00352 3Fe-4S ferredoxin signature 48 60 6.3E-7 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Amir_2892 f51f79fe8c9389615fdffca3e90a8f0b 66 PRINTS PR00352 3Fe-4S ferredoxin signature 16 26 6.3E-7 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Amir_2892 f51f79fe8c9389615fdffca3e90a8f0b 66 Gene3D G3DSA:3.30.70.20 1 64 3.0E-19 T 14-10-2018 Amir_2892 f51f79fe8c9389615fdffca3e90a8f0b 66 SUPERFAMILY SSF54862 2 62 2.1E-14 T 14-10-2018 Amir_6244 20f1f3854a4f8b678190d77d256c4bb7 139 ProDom PD004028 INHIBITOR PROTEASE SERINE DIRECT SEQUENCING SUBTILISIN PRECURSOR SIGNAL INHIBITOR-LIKE INHIBITOR 56 126 2.0E-10 T 14-10-2018 IPR023549 Subtilisin inhibitor GO:0004867 Amir_6244 20f1f3854a4f8b678190d77d256c4bb7 139 Pfam PF00720 Subtilisin inhibitor-like 39 122 7.8E-25 T 14-10-2018 IPR023549 Subtilisin inhibitor GO:0004867 Amir_6244 20f1f3854a4f8b678190d77d256c4bb7 139 Gene3D G3DSA:3.30.350.10 35 136 8.9E-28 T 14-10-2018 IPR036819 Subtilisin inhibitor-like superfamily GO:0004867 Amir_6244 20f1f3854a4f8b678190d77d256c4bb7 139 SUPERFAMILY SSF55399 38 136 3.66E-21 T 14-10-2018 IPR036819 Subtilisin inhibitor-like superfamily GO:0004867 Amir_5161 5e35bd43e3337121fa384dcf8ce4d3b5 203 Pfam PF06197 Protein of unknown function (DUF998) 12 194 7.8E-27 T 14-10-2018 IPR009339 Protein of unknown function DUF998 Amir_5028 e4625b52f5a4e18414ebcf5526949488 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 5.6E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5028 e4625b52f5a4e18414ebcf5526949488 194 SUPERFAMILY SSF48498 81 192 3.56E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_5028 e4625b52f5a4e18414ebcf5526949488 194 SUPERFAMILY SSF46689 6 83 6.67E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5028 e4625b52f5a4e18414ebcf5526949488 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 9.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5028 e4625b52f5a4e18414ebcf5526949488 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 9.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5028 e4625b52f5a4e18414ebcf5526949488 194 Gene3D G3DSA:1.10.357.10 12 193 1.0E-44 T 14-10-2018 Amir_3796 acfcffac7d7f1cdc0a5114aa15c9b97f 597 Gene3D G3DSA:2.60.40.1180 383 467 2.3E-20 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_3796 acfcffac7d7f1cdc0a5114aa15c9b97f 597 Pfam PF16499 Alpha galactosidase A 95 379 8.4E-76 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_3796 acfcffac7d7f1cdc0a5114aa15c9b97f 597 SUPERFAMILY SSF51011 372 466 1.6E-13 T 14-10-2018 Amir_3796 acfcffac7d7f1cdc0a5114aa15c9b97f 597 Gene3D G3DSA:3.20.20.70 93 382 9.9E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_3796 acfcffac7d7f1cdc0a5114aa15c9b97f 597 SMART SM00458 472 597 1.0E-16 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3796 acfcffac7d7f1cdc0a5114aa15c9b97f 597 Pfam PF00652 Ricin-type beta-trefoil lectin domain 474 594 1.3E-21 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3796 acfcffac7d7f1cdc0a5114aa15c9b97f 597 SUPERFAMILY SSF50370 471 596 1.02E-29 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_3796 acfcffac7d7f1cdc0a5114aa15c9b97f 597 Gene3D G3DSA:2.80.10.50 468 597 1.2E-29 T 14-10-2018 Amir_3796 acfcffac7d7f1cdc0a5114aa15c9b97f 597 PRINTS PR00740 Glycosyl hydrolase family 27 signature 90 109 4.1E-48 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_3796 acfcffac7d7f1cdc0a5114aa15c9b97f 597 PRINTS PR00740 Glycosyl hydrolase family 27 signature 335 356 4.1E-48 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_3796 acfcffac7d7f1cdc0a5114aa15c9b97f 597 PRINTS PR00740 Glycosyl hydrolase family 27 signature 237 255 4.1E-48 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_3796 acfcffac7d7f1cdc0a5114aa15c9b97f 597 PRINTS PR00740 Glycosyl hydrolase family 27 signature 126 141 4.1E-48 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_3796 acfcffac7d7f1cdc0a5114aa15c9b97f 597 PRINTS PR00740 Glycosyl hydrolase family 27 signature 314 333 4.1E-48 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_3796 acfcffac7d7f1cdc0a5114aa15c9b97f 597 PRINTS PR00740 Glycosyl hydrolase family 27 signature 208 225 4.1E-48 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_3796 acfcffac7d7f1cdc0a5114aa15c9b97f 597 SUPERFAMILY SSF51445 86 379 1.32E-80 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_5357 a589ae7fa2c8bd8339d7345f587dc2dd 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Amir_5357 a589ae7fa2c8bd8339d7345f587dc2dd 126 SUPERFAMILY SSF51230 2 125 3.27E-43 T 14-10-2018 IPR011053 Single hybrid motif Amir_5357 a589ae7fa2c8bd8339d7345f587dc2dd 126 Pfam PF01597 Glycine cleavage H-protein 6 126 2.3E-44 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Amir_5357 a589ae7fa2c8bd8339d7345f587dc2dd 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 3 125 38.658 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Amir_5357 a589ae7fa2c8bd8339d7345f587dc2dd 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 125 1.4E-50 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Amir_5357 a589ae7fa2c8bd8339d7345f587dc2dd 126 Gene3D G3DSA:2.40.50.100 1 126 4.3E-50 T 14-10-2018 Amir_6732 51cb3fd38e3cf2de097bb44df754011e 216 SMART SM00554 117 214 5.2E-23 T 14-10-2018 IPR000782 FAS1 domain Amir_6732 51cb3fd38e3cf2de097bb44df754011e 216 Gene3D G3DSA:2.30.180.10 56 215 1.8E-42 T 14-10-2018 IPR036378 FAS1 domain superfamily Amir_6732 51cb3fd38e3cf2de097bb44df754011e 216 Pfam PF02469 Fasciclin domain 93 213 3.4E-29 T 14-10-2018 IPR000782 FAS1 domain Amir_6732 51cb3fd38e3cf2de097bb44df754011e 216 SUPERFAMILY SSF82153 80 214 1.24E-30 T 14-10-2018 IPR036378 FAS1 domain superfamily Amir_0194 071ad56527339dc783c70c538847076b 401 SMART SM00530 11 66 5.0E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_0194 071ad56527339dc783c70c538847076b 401 Gene3D G3DSA:1.10.260.40 7 89 7.6E-13 T 14-10-2018 Amir_0194 071ad56527339dc783c70c538847076b 401 SUPERFAMILY SSF47413 8 66 5.35E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_0194 071ad56527339dc783c70c538847076b 401 Pfam PF13560 Helix-turn-helix domain 14 64 2.2E-10 T 14-10-2018 Amir_5149 fb7a54a8fb6e4e893deae7c10721b023 147 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 3 139 9.6E-49 T 14-10-2018 Amir_5149 fb7a54a8fb6e4e893deae7c10721b023 147 SUPERFAMILY SSF82649 2 141 1.44E-46 T 14-10-2018 Amir_5149 fb7a54a8fb6e4e893deae7c10721b023 147 Gene3D G3DSA:3.90.1010.10 1 146 7.4E-48 T 14-10-2018 Amir_5149 fb7a54a8fb6e4e893deae7c10721b023 147 Pfam PF01592 NifU-like N terminal domain 6 127 5.1E-28 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Amir_0136 f035eea3704e6bf6f561eb599496c039 399 SUPERFAMILY SSF53383 3 398 2.39E-65 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_0136 f035eea3704e6bf6f561eb599496c039 399 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 395 2.8E-121 T 14-10-2018 IPR011340 Cysteine desulfurase-related Amir_0136 f035eea3704e6bf6f561eb599496c039 399 Pfam PF00266 Aminotransferase class-V 21 391 1.1E-38 T 14-10-2018 IPR000192 Aminotransferase class V domain Amir_0136 f035eea3704e6bf6f561eb599496c039 399 Gene3D G3DSA:3.40.640.10 28 284 1.3E-119 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_0136 f035eea3704e6bf6f561eb599496c039 399 Gene3D G3DSA:3.90.1150.10 18 395 1.3E-119 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_5412 bbc62b2b40755d2cb3f868c29459efa4 404 PRINTS PR00723 Subtilisin serine protease family (S8) signature 358 374 1.0E-10 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_5412 bbc62b2b40755d2cb3f868c29459efa4 404 PRINTS PR00723 Subtilisin serine protease family (S8) signature 193 206 1.0E-10 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_5412 bbc62b2b40755d2cb3f868c29459efa4 404 PRINTS PR00723 Subtilisin serine protease family (S8) signature 146 165 1.0E-10 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_5412 bbc62b2b40755d2cb3f868c29459efa4 404 Pfam PF00082 Subtilase family 146 389 3.8E-15 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_5412 bbc62b2b40755d2cb3f868c29459efa4 404 Gene3D G3DSA:3.40.50.200 140 402 3.1E-43 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_5412 bbc62b2b40755d2cb3f868c29459efa4 404 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 359 369 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_5412 bbc62b2b40755d2cb3f868c29459efa4 404 SUPERFAMILY SSF52743 143 399 3.01E-40 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_0536 256bf8d61ba68d56e886a1974ea41be6 102 Pfam PF10824 Excreted virulence factor EspC, type VII ESX diderm 1 93 1.3E-6 T 14-10-2018 IPR022536 ESX-1 secretion-associated protein EspC GO:0009306 Amir_5685 3a8669c4faf6d8db112778aa7295bd78 462 Gene3D G3DSA:1.20.1340.10 1 81 9.3E-34 T 14-10-2018 Amir_5685 3a8669c4faf6d8db112778aa7295bd78 462 Gene3D G3DSA:3.40.640.10 82 370 3.9E-97 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_5685 3a8669c4faf6d8db112778aa7295bd78 462 SUPERFAMILY SSF53383 1 462 5.55E-132 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_5685 3a8669c4faf6d8db112778aa7295bd78 462 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 73 92 2.6E-51 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Amir_5685 3a8669c4faf6d8db112778aa7295bd78 462 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 113 132 2.6E-51 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Amir_5685 3a8669c4faf6d8db112778aa7295bd78 462 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 343 358 2.6E-51 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Amir_5685 3a8669c4faf6d8db112778aa7295bd78 462 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 29 46 2.6E-51 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Amir_5685 3a8669c4faf6d8db112778aa7295bd78 462 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 47 66 2.6E-51 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Amir_5685 3a8669c4faf6d8db112778aa7295bd78 462 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 6 25 2.6E-51 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Amir_5685 3a8669c4faf6d8db112778aa7295bd78 462 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 386 405 2.6E-51 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Amir_5685 3a8669c4faf6d8db112778aa7295bd78 462 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 94 112 2.6E-51 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Amir_5685 3a8669c4faf6d8db112778aa7295bd78 462 Gene3D G3DSA:3.90.1150.10 371 462 4.5E-23 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_5685 3a8669c4faf6d8db112778aa7295bd78 462 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 35 401 3.8E-99 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Amir_5276 93c172a7a952dc93803634d0a49fe5d7 205 SUPERFAMILY SSF53955 39 113 1.69E-31 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Amir_5276 93c172a7a952dc93803634d0a49fe5d7 205 Pfam PF06737 Transglycosylase-like domain 39 111 2.6E-33 T 14-10-2018 IPR010618 Transglycosylase-like Amir_5276 93c172a7a952dc93803634d0a49fe5d7 205 Gene3D G3DSA:3.10.350.10 157 203 4.1E-12 T 14-10-2018 IPR036779 LysM domain superfamily Amir_5276 93c172a7a952dc93803634d0a49fe5d7 205 SMART SM00257 157 205 7.8E-7 T 14-10-2018 IPR018392 LysM domain Amir_5276 93c172a7a952dc93803634d0a49fe5d7 205 Pfam PF01476 LysM domain 158 204 4.3E-8 T 14-10-2018 IPR018392 LysM domain Amir_5276 93c172a7a952dc93803634d0a49fe5d7 205 SUPERFAMILY SSF54106 158 204 8.89E-6 T 14-10-2018 Amir_5276 93c172a7a952dc93803634d0a49fe5d7 205 Gene3D G3DSA:1.10.530.10 18 116 4.8E-36 T 14-10-2018 Amir_5527 161d048f99a9c018f58afb7003fe8736 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 1.0E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5527 161d048f99a9c018f58afb7003fe8736 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 1.0E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5527 161d048f99a9c018f58afb7003fe8736 203 Gene3D G3DSA:1.10.10.60 3 65 1.0E-18 T 14-10-2018 Amir_5527 161d048f99a9c018f58afb7003fe8736 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 71 7.3E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5527 161d048f99a9c018f58afb7003fe8736 203 Gene3D G3DSA:1.10.357.10 66 203 9.7E-17 T 14-10-2018 Amir_5527 161d048f99a9c018f58afb7003fe8736 203 SUPERFAMILY SSF48498 92 199 5.4E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_5527 161d048f99a9c018f58afb7003fe8736 203 SUPERFAMILY SSF46689 12 90 4.39E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0789 e5374efb3d785687308ab5b73b00f098 455 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 303 310 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Amir_0789 e5374efb3d785687308ab5b73b00f098 455 Gene3D G3DSA:3.40.220.10 45 134 1.6E-6 T 14-10-2018 Amir_0789 e5374efb3d785687308ab5b73b00f098 455 PRINTS PR00481 Cytosol aminopeptidase signature 218 235 1.4E-48 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Amir_0789 e5374efb3d785687308ab5b73b00f098 455 PRINTS PR00481 Cytosol aminopeptidase signature 240 261 1.4E-48 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Amir_0789 e5374efb3d785687308ab5b73b00f098 455 PRINTS PR00481 Cytosol aminopeptidase signature 299 319 1.4E-48 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Amir_0789 e5374efb3d785687308ab5b73b00f098 455 PRINTS PR00481 Cytosol aminopeptidase signature 328 343 1.4E-48 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Amir_0789 e5374efb3d785687308ab5b73b00f098 455 PRINTS PR00481 Cytosol aminopeptidase signature 277 298 1.4E-48 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Amir_0789 e5374efb3d785687308ab5b73b00f098 455 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 143 447 1.0E-111 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Amir_0789 e5374efb3d785687308ab5b73b00f098 455 Gene3D G3DSA:3.40.630.10 135 452 4.6E-119 T 14-10-2018 Amir_0789 e5374efb3d785687308ab5b73b00f098 455 SUPERFAMILY SSF53187 138 451 5.65E-106 T 14-10-2018 Amir_0944 6dbbcf914c8cb9ea7787e4be6d7b1cff 367 SUPERFAMILY SSF75620 28 364 1.1E-121 T 14-10-2018 Amir_0944 6dbbcf914c8cb9ea7787e4be6d7b1cff 367 SMART SM00937 83 193 3.1E-45 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Amir_0944 6dbbcf914c8cb9ea7787e4be6d7b1cff 367 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 243 259 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Amir_0944 6dbbcf914c8cb9ea7787e4be6d7b1cff 367 Gene3D G3DSA:3.30.160.20 224 317 7.3E-90 T 14-10-2018 Amir_0944 6dbbcf914c8cb9ea7787e4be6d7b1cff 367 Pfam PF03462 PCRF domain 29 218 2.0E-55 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Amir_0944 6dbbcf914c8cb9ea7787e4be6d7b1cff 367 Gene3D G3DSA:3.30.70.1660 128 355 7.3E-90 T 14-10-2018 Amir_0944 6dbbcf914c8cb9ea7787e4be6d7b1cff 367 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 4 361 5.9E-155 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Amir_0944 6dbbcf914c8cb9ea7787e4be6d7b1cff 367 Gene3D G3DSA:1.20.58.410 2 114 2.5E-28 T 14-10-2018 Amir_0944 6dbbcf914c8cb9ea7787e4be6d7b1cff 367 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 362 36.918 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Amir_0944 6dbbcf914c8cb9ea7787e4be6d7b1cff 367 Pfam PF00472 RF-1 domain 228 334 2.1E-38 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Amir_0394 9b2238c5d0559938c9b0563ba95d867b 470 SMART SM00922 233 329 1.5E-24 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Amir_0394 9b2238c5d0559938c9b0563ba95d867b 470 SUPERFAMILY SSF54826 39 173 2.19E-35 T 14-10-2018 Amir_0394 9b2238c5d0559938c9b0563ba95d867b 470 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 279 310 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Amir_0394 9b2238c5d0559938c9b0563ba95d867b 470 Gene3D G3DSA:3.20.20.120 166 467 1.8E-109 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_0394 9b2238c5d0559938c9b0563ba95d867b 470 SUPERFAMILY SSF51604 218 464 2.75E-68 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_0394 9b2238c5d0559938c9b0563ba95d867b 470 Pfam PF13378 Enolase C-terminal domain-like 236 450 3.5E-60 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Amir_0394 9b2238c5d0559938c9b0563ba95d867b 470 Gene3D G3DSA:3.30.390.10 37 165 7.8E-48 T 14-10-2018 IPR029017 Enolase-like, N-terminal Amir_0394 9b2238c5d0559938c9b0563ba95d867b 470 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 71 170 9.6E-7 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Amir_4785 a8fe3edcfaaad16f21589119e5ac5101 267 Pfam PF13649 Methyltransferase domain 41 135 2.3E-18 T 14-10-2018 Amir_4785 a8fe3edcfaaad16f21589119e5ac5101 267 Gene3D G3DSA:3.40.50.150 3 218 9.0E-34 T 14-10-2018 Amir_4785 a8fe3edcfaaad16f21589119e5ac5101 267 SUPERFAMILY SSF53335 4 208 1.34E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3415 f2bfce82223b2efba7f624bc75f574b5 219 Gene3D G3DSA:3.10.180.10 94 209 5.3E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_3415 f2bfce82223b2efba7f624bc75f574b5 219 SUPERFAMILY SSF54593 6 208 4.75E-10 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_3415 f2bfce82223b2efba7f624bc75f574b5 219 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 198 1.8E-4 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amir_5048 18fbe65c6dbc0d1bc0731173db2b94e8 245 SUPERFAMILY SSF51735 1 241 4.23E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5048 18fbe65c6dbc0d1bc0731173db2b94e8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.1E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5048 18fbe65c6dbc0d1bc0731173db2b94e8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.1E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5048 18fbe65c6dbc0d1bc0731173db2b94e8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 1.1E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5048 18fbe65c6dbc0d1bc0731173db2b94e8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.1E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5048 18fbe65c6dbc0d1bc0731173db2b94e8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.1E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5048 18fbe65c6dbc0d1bc0731173db2b94e8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5048 18fbe65c6dbc0d1bc0731173db2b94e8 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 3.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5048 18fbe65c6dbc0d1bc0731173db2b94e8 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 3.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5048 18fbe65c6dbc0d1bc0731173db2b94e8 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 3.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5048 18fbe65c6dbc0d1bc0731173db2b94e8 245 Gene3D G3DSA:3.40.50.720 1 241 5.4E-72 T 14-10-2018 Amir_5048 18fbe65c6dbc0d1bc0731173db2b94e8 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 172 0.0038 T 14-10-2018 Amir_5048 18fbe65c6dbc0d1bc0731173db2b94e8 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_5048 18fbe65c6dbc0d1bc0731173db2b94e8 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 239 2.3E-53 T 14-10-2018 Amir_5453 a355b92f6aee21befe7a481bd1931d95 387 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 11 383 4.5E-139 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Amir_5453 a355b92f6aee21befe7a481bd1931d95 387 SUPERFAMILY SSF53383 10 385 9.14E-126 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_5453 a355b92f6aee21befe7a481bd1931d95 387 PIRSF PIRSF000521 162 387 3.3E-30 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_5453 a355b92f6aee21befe7a481bd1931d95 387 PIRSF PIRSF000521 116 148 0.7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_5453 a355b92f6aee21befe7a481bd1931d95 387 PIRSF PIRSF000521 5 123 3.2E-10 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_5453 a355b92f6aee21befe7a481bd1931d95 387 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 10 387 66.051 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Amir_5453 a355b92f6aee21befe7a481bd1931d95 387 Pfam PF00202 Aminotransferase class-III 17 381 2.3E-109 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_5453 a355b92f6aee21befe7a481bd1931d95 387 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 213 250 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_5453 a355b92f6aee21befe7a481bd1931d95 387 Gene3D G3DSA:3.90.1150.10 20 373 2.3E-141 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_5453 a355b92f6aee21befe7a481bd1931d95 387 Gene3D G3DSA:3.40.640.10 54 295 2.3E-141 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_1817 ec30a1c46091328c13826d2011db6c96 287 Gene3D G3DSA:3.40.50.280 173 283 1.4E-18 T 14-10-2018 Amir_1817 ec30a1c46091328c13826d2011db6c96 287 SUPERFAMILY SSF46955 8 73 1.1E-12 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_1817 ec30a1c46091328c13826d2011db6c96 287 Gene3D G3DSA:1.10.1660.10 3 76 8.4E-21 T 14-10-2018 Amir_1817 ec30a1c46091328c13826d2011db6c96 287 Pfam PF13411 MerR HTH family regulatory protein 10 70 4.1E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_1817 ec30a1c46091328c13826d2011db6c96 287 Pfam PF02310 B12 binding domain 177 265 4.4E-7 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amir_1817 ec30a1c46091328c13826d2011db6c96 287 SMART SM00422 7 76 6.9E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_1817 ec30a1c46091328c13826d2011db6c96 287 SUPERFAMILY SSF52242 172 269 2.67E-6 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amir_3039 008b077764d527131239ab735c7b4ebb 251 SMART SM00345 20 83 4.4E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_3039 008b077764d527131239ab735c7b4ebb 251 SUPERFAMILY SSF46785 19 76 5.76E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3039 008b077764d527131239ab735c7b4ebb 251 Gene3D G3DSA:1.20.120.530 90 242 9.6E-31 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_3039 008b077764d527131239ab735c7b4ebb 251 Pfam PF07729 FCD domain 109 233 1.1E-19 T 14-10-2018 IPR011711 GntR, C-terminal Amir_3039 008b077764d527131239ab735c7b4ebb 251 SUPERFAMILY SSF48008 106 239 2.28E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_3039 008b077764d527131239ab735c7b4ebb 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 76 7.9E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_3039 008b077764d527131239ab735c7b4ebb 251 Gene3D G3DSA:1.10.10.10 19 87 5.8E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3039 008b077764d527131239ab735c7b4ebb 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 5.7E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_3039 008b077764d527131239ab735c7b4ebb 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 5.7E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_3039 008b077764d527131239ab735c7b4ebb 251 SMART SM00895 108 234 1.6E-16 T 14-10-2018 IPR011711 GntR, C-terminal Amir_4382 3cdce8110fb5ee7160be1662b0f4f38a 330 SUPERFAMILY SSF53335 107 328 3.22E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_4382 3cdce8110fb5ee7160be1662b0f4f38a 330 Pfam PF00891 O-methyltransferase 106 312 8.5E-37 T 14-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 Amir_4382 3cdce8110fb5ee7160be1662b0f4f38a 330 SUPERFAMILY SSF46785 10 86 2.85E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4382 3cdce8110fb5ee7160be1662b0f4f38a 330 Gene3D G3DSA:1.10.10.10 1 96 2.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4382 3cdce8110fb5ee7160be1662b0f4f38a 330 PIRSF PIRSF005739 2 328 4.7E-35 T 14-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 Amir_4382 3cdce8110fb5ee7160be1662b0f4f38a 330 Gene3D G3DSA:3.40.50.150 100 329 2.0E-56 T 14-10-2018 Amir_4368 08aaa90e551c52431fca88afaa4f08a7 380 Gene3D G3DSA:1.10.540.10 4 121 4.9E-28 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_4368 08aaa90e551c52431fca88afaa4f08a7 380 Gene3D G3DSA:2.40.110.10 122 232 7.3E-34 T 14-10-2018 Amir_4368 08aaa90e551c52431fca88afaa4f08a7 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 377 5.6E-47 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_4368 08aaa90e551c52431fca88afaa4f08a7 380 PIRSF PIRSF016578 7 82 12.0 T 14-10-2018 Amir_4368 08aaa90e551c52431fca88afaa4f08a7 380 PIRSF PIRSF016578 131 376 1.2E-19 T 14-10-2018 Amir_4368 08aaa90e551c52431fca88afaa4f08a7 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 119 7.5E-23 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_4368 08aaa90e551c52431fca88afaa4f08a7 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 216 4.1E-22 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amir_4368 08aaa90e551c52431fca88afaa4f08a7 380 SUPERFAMILY SSF47203 227 377 5.64E-50 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_4368 08aaa90e551c52431fca88afaa4f08a7 380 Gene3D G3DSA:1.20.140.10 233 378 4.1E-50 T 14-10-2018 Amir_4368 08aaa90e551c52431fca88afaa4f08a7 380 SUPERFAMILY SSF56645 1 225 3.66E-58 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_2310 383c412e8809bf398f0f3b63e0ce05cb 383 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 6 283 2.8E-42 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Amir_2310 383c412e8809bf398f0f3b63e0ce05cb 383 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 383 66.761 T 14-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Amir_2310 383c412e8809bf398f0f3b63e0ce05cb 383 SUPERFAMILY SSF55931 4 342 5.2E-76 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amir_2310 383c412e8809bf398f0f3b63e0ce05cb 383 Gene3D G3DSA:3.30.590.20 2 355 3.0E-93 T 14-10-2018 Amir_2310 383c412e8809bf398f0f3b63e0ce05cb 383 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 5 287 1.9E-71 T 14-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Amir_1081 f0fbb7a3ab6be13e0b9b9fce6c02d57d 307 PIRSF PIRSF000196 1 307 2.3E-110 T 14-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 Amir_1081 f0fbb7a3ab6be13e0b9b9fce6c02d57d 307 Gene3D G3DSA:3.20.20.530 22 305 5.7E-94 T 14-10-2018 Amir_1081 f0fbb7a3ab6be13e0b9b9fce6c02d57d 307 SUPERFAMILY SSF51730 35 302 8.24E-72 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like Amir_1081 f0fbb7a3ab6be13e0b9b9fce6c02d57d 307 Pfam PF01619 Proline dehydrogenase 51 298 6.5E-33 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 Amir_4623 def67bff21ff742b85598eb7deeae119 297 Pfam PF06445 GyrI-like small molecule binding domain 140 279 4.1E-10 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain Amir_4623 def67bff21ff742b85598eb7deeae119 297 Pfam PF13411 MerR HTH family regulatory protein 6 73 4.3E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4623 def67bff21ff742b85598eb7deeae119 297 SMART SM00422 5 75 2.7E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4623 def67bff21ff742b85598eb7deeae119 297 SUPERFAMILY SSF46955 5 133 5.49E-19 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_4623 def67bff21ff742b85598eb7deeae119 297 Gene3D G3DSA:3.20.80.10 138 286 3.4E-17 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amir_4623 def67bff21ff742b85598eb7deeae119 297 Gene3D G3DSA:1.10.1660.10 2 137 6.5E-23 T 14-10-2018 Amir_4623 def67bff21ff742b85598eb7deeae119 297 SUPERFAMILY SSF55136 139 272 8.37E-9 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amir_4623 def67bff21ff742b85598eb7deeae119 297 SMART SM00871 138 286 3.3E-7 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding Amir_3040 7e6293e06d9a1a0cd24c09135d397fad 339 SUPERFAMILY SSF47413 9 65 6.28E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3040 7e6293e06d9a1a0cd24c09135d397fad 339 SUPERFAMILY SSF53822 69 336 1.67E-65 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_3040 7e6293e06d9a1a0cd24c09135d397fad 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 14-10-2018 Amir_3040 7e6293e06d9a1a0cd24c09135d397fad 339 Gene3D G3DSA:3.40.50.2300 167 333 1.0E-71 T 14-10-2018 Amir_3040 7e6293e06d9a1a0cd24c09135d397fad 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 55 2.6E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_3040 7e6293e06d9a1a0cd24c09135d397fad 339 SMART SM00354 8 78 2.4E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_3040 7e6293e06d9a1a0cd24c09135d397fad 339 Gene3D G3DSA:1.10.260.40 2 65 3.6E-20 T 14-10-2018 Amir_3040 7e6293e06d9a1a0cd24c09135d397fad 339 Pfam PF13377 Periplasmic binding protein-like domain 175 336 1.1E-35 T 14-10-2018 Amir_3040 7e6293e06d9a1a0cd24c09135d397fad 339 Gene3D G3DSA:3.40.50.2300 75 328 1.0E-71 T 14-10-2018 Amir_6069 d61f50bff56db6fbf1d920c8bdc92e07 204 Pfam PF00581 Rhodanese-like domain 103 190 2.2E-7 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_6069 d61f50bff56db6fbf1d920c8bdc92e07 204 SUPERFAMILY SSF52821 102 199 2.23E-16 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_6069 d61f50bff56db6fbf1d920c8bdc92e07 204 SMART SM00450 61 194 7.8E-11 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_6069 d61f50bff56db6fbf1d920c8bdc92e07 204 Gene3D G3DSA:3.40.250.10 44 197 5.1E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_5104 f963af693106f91f54ebf906e91b1c01 284 Pfam PF00106 short chain dehydrogenase 9 185 5.3E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5104 f963af693106f91f54ebf906e91b1c01 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.5E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5104 f963af693106f91f54ebf906e91b1c01 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.5E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5104 f963af693106f91f54ebf906e91b1c01 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.5E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5104 f963af693106f91f54ebf906e91b1c01 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 9.0E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5104 f963af693106f91f54ebf906e91b1c01 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.0E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5104 f963af693106f91f54ebf906e91b1c01 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 9.0E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5104 f963af693106f91f54ebf906e91b1c01 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 9.0E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5104 f963af693106f91f54ebf906e91b1c01 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 9.0E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5104 f963af693106f91f54ebf906e91b1c01 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_5104 f963af693106f91f54ebf906e91b1c01 284 SUPERFAMILY SSF51735 8 256 1.49E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5104 f963af693106f91f54ebf906e91b1c01 284 Gene3D G3DSA:3.40.50.720 8 266 1.8E-70 T 14-10-2018 Amir_0700 e128668d8c6252d518a4e5068ed56b45 456 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 296 5.7E-69 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amir_0700 e128668d8c6252d518a4e5068ed56b45 456 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Amir_0700 e128668d8c6252d518a4e5068ed56b45 456 Gene3D G3DSA:3.40.50.1100 45 149 1.4E-119 T 14-10-2018 Amir_0700 e128668d8c6252d518a4e5068ed56b45 456 SUPERFAMILY SSF53686 2 317 8.38E-98 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amir_0700 e128668d8c6252d518a4e5068ed56b45 456 Gene3D G3DSA:3.40.50.1100 9 303 1.4E-119 T 14-10-2018 Amir_0700 e128668d8c6252d518a4e5068ed56b45 456 Pfam PF00571 CBS domain 406 454 7.0E-6 T 14-10-2018 IPR000644 CBS domain Amir_0700 e128668d8c6252d518a4e5068ed56b45 456 Pfam PF00571 CBS domain 326 391 4.1E-8 T 14-10-2018 IPR000644 CBS domain Amir_0700 e128668d8c6252d518a4e5068ed56b45 456 SMART SM00116 409 454 0.099 T 14-10-2018 IPR000644 CBS domain Amir_0700 e128668d8c6252d518a4e5068ed56b45 456 SMART SM00116 339 392 7.2E-6 T 14-10-2018 IPR000644 CBS domain Amir_0700 e128668d8c6252d518a4e5068ed56b45 456 SUPERFAMILY SSF54631 325 455 1.39E-19 T 14-10-2018 Amir_0700 e128668d8c6252d518a4e5068ed56b45 456 Gene3D G3DSA:3.10.580.10 319 456 5.8E-20 T 14-10-2018 Amir_0700 e128668d8c6252d518a4e5068ed56b45 456 TIGRFAM TIGR01137 cysta_beta: cystathionine beta-synthase 5 454 8.5E-200 T 14-10-2018 IPR005857 Cystathionine beta-synthase GO:0004122|GO:0005737|GO:0019343 KEGG: 00260+4.2.1.22|KEGG: 00270+4.2.1.22|MetaCyc: PWY-801 Amir_6276 0eb5aa6e6110a6f090ef17ab9fc140cb 102 Pfam PF10824 Excreted virulence factor EspC, type VII ESX diderm 7 96 7.3E-7 T 14-10-2018 IPR022536 ESX-1 secretion-associated protein EspC GO:0009306 Amir_4341 59aa3940f6c7dc938267c3a44943649f 345 Gene3D G3DSA:1.10.1780.10 193 345 7.4E-15 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Amir_4341 59aa3940f6c7dc938267c3a44943649f 345 Gene3D G3DSA:1.10.1780.10 9 150 1.7E-11 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Amir_4341 59aa3940f6c7dc938267c3a44943649f 345 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 39 0.081 T 14-10-2018 IPR004176 Clp, N-terminal Amir_4341 59aa3940f6c7dc938267c3a44943649f 345 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 309 344 0.0021 T 14-10-2018 IPR004176 Clp, N-terminal Amir_4341 59aa3940f6c7dc938267c3a44943649f 345 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 242 261 1.5 T 14-10-2018 IPR004176 Clp, N-terminal Amir_1874 514b53a8bf09803d13b184208129c7e2 374 SUPERFAMILY SSF48452 196 358 2.53E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_1874 514b53a8bf09803d13b184208129c7e2 374 Gene3D G3DSA:1.25.40.10 163 368 1.7E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3685 32fc3dc3687858cff35e675c682929d3 824 PIRSF PIRSF001227 24 174 2.9E-17 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 Amir_3685 32fc3dc3687858cff35e675c682929d3 824 PIRSF PIRSF001227 712 822 1.1E-8 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 Amir_3685 32fc3dc3687858cff35e675c682929d3 824 PIRSF PIRSF001227 211 660 3.9E-37 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 Amir_3685 32fc3dc3687858cff35e675c682929d3 824 Gene3D G3DSA:1.10.1400.10 540 746 4.1E-175 T 14-10-2018 Amir_3685 32fc3dc3687858cff35e675c682929d3 824 SUPERFAMILY SSF56235 59 820 1.65E-142 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_3685 32fc3dc3687858cff35e675c682929d3 824 Gene3D G3DSA:2.30.120.10 328 405 4.1E-175 T 14-10-2018 Amir_3685 32fc3dc3687858cff35e675c682929d3 824 Gene3D G3DSA:3.60.20.10 253 810 4.1E-175 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_3685 32fc3dc3687858cff35e675c682929d3 824 Gene3D G3DSA:1.10.439.10 58 223 6.7E-52 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 Amir_3685 32fc3dc3687858cff35e675c682929d3 824 Pfam PF01804 Penicillin amidase 67 811 5.5E-127 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 Amir_3775 d5dfaaec03ca24cf28a7b4d6b7d286ed 108 SUPERFAMILY SSF140453 5 100 3.53E-7 T 14-10-2018 IPR036689 ESAT-6-like superfamily Amir_3775 d5dfaaec03ca24cf28a7b4d6b7d286ed 108 Gene3D G3DSA:1.10.287.1060 3 101 4.0E-9 T 14-10-2018 Amir_3515 5812f1d3da64167cbe558de527e1b0c8 316 SUPERFAMILY SSF56112 52 285 5.69E-17 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_3515 5812f1d3da64167cbe558de527e1b0c8 316 Pfam PF01636 Phosphotransferase enzyme family 70 246 1.8E-10 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_0208 9962bd84e763995327a9a6c860838291 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 309 3.9E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0208 9962bd84e763995327a9a6c860838291 310 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 72 1.1E-11 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Amir_0208 9962bd84e763995327a9a6c860838291 310 SUPERFAMILY SSF161098 101 291 1.7E-28 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0208 9962bd84e763995327a9a6c860838291 310 Gene3D G3DSA:1.10.3720.10 96 309 7.8E-25 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3078 6789aea70ff2382a6e6bc0e8cded56b9 744 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 5 741 33.077 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Amir_3078 6789aea70ff2382a6e6bc0e8cded56b9 744 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 10 740 1.5E-298 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Amir_3078 6789aea70ff2382a6e6bc0e8cded56b9 744 SUPERFAMILY SSF51726 7 378 1.57E-89 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Amir_3078 6789aea70ff2382a6e6bc0e8cded56b9 744 Gene3D G3DSA:3.20.20.210 374 739 3.1E-303 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Amir_3078 6789aea70ff2382a6e6bc0e8cded56b9 744 PIRSF PIRSF000382 4 744 2.6E-293 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Amir_3078 6789aea70ff2382a6e6bc0e8cded56b9 744 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 414 736 2.2E-139 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Amir_3078 6789aea70ff2382a6e6bc0e8cded56b9 744 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 7 305 2.0E-107 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Amir_3078 6789aea70ff2382a6e6bc0e8cded56b9 744 Gene3D G3DSA:3.20.20.210 9 507 3.1E-303 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Amir_3078 6789aea70ff2382a6e6bc0e8cded56b9 744 SUPERFAMILY SSF51726 401 740 4.84E-104 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Amir_2138 da0d5f6f5aedc09164322354218a0a92 191 Gene3D G3DSA:3.10.200.10 3 114 3.5E-15 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Amir_2138 da0d5f6f5aedc09164322354218a0a92 191 SUPERFAMILY SSF51069 6 187 3.4E-33 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Amir_2138 da0d5f6f5aedc09164322354218a0a92 191 SMART SM01057 3 187 8.7E-11 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain Amir_2138 da0d5f6f5aedc09164322354218a0a92 191 Gene3D G3DSA:3.10.200.10 115 189 8.6E-15 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Amir_2138 da0d5f6f5aedc09164322354218a0a92 191 Pfam PF00194 Eukaryotic-type carbonic anhydrase 118 178 3.4E-11 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain Amir_2138 da0d5f6f5aedc09164322354218a0a92 191 Pfam PF00194 Eukaryotic-type carbonic anhydrase 7 94 1.7E-7 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain Amir_5718 ad82bbb01b345bbf941eb4acec6d0c60 174 Gene3D G3DSA:1.10.10.970 6 71 3.7E-17 T 14-10-2018 Amir_5718 ad82bbb01b345bbf941eb4acec6d0c60 174 SUPERFAMILY SSF56399 7 172 1.22E-54 T 14-10-2018 Amir_5718 ad82bbb01b345bbf941eb4acec6d0c60 174 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 7 163 1.5E-36 T 14-10-2018 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 Amir_5718 ad82bbb01b345bbf941eb4acec6d0c60 174 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 5 171 30.674 T 14-10-2018 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 Amir_5718 ad82bbb01b345bbf941eb4acec6d0c60 174 Gene3D G3DSA:3.20.170.30 91 174 5.7E-29 T 14-10-2018 Amir_5648 e2328d11c3f45747f53b65a2c13a29fb 93 Gene3D G3DSA:1.20.58.1000 4 93 2.8E-35 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily Amir_5648 e2328d11c3f45747f53b65a2c13a29fb 93 Pfam PF02583 Metal-sensitive transcriptional repressor 7 88 8.4E-32 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 Amir_4790 207a56bc48d30a5d1d8d30025e7212ca 316 Gene3D G3DSA:1.10.132.120 90 301 1.1E-56 T 14-10-2018 Amir_4790 207a56bc48d30a5d1d8d30025e7212ca 316 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 141 155 1.2E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Amir_4790 207a56bc48d30a5d1d8d30025e7212ca 316 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 225 239 1.2E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Amir_4790 207a56bc48d30a5d1d8d30025e7212ca 316 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 276 287 1.2E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Amir_4790 207a56bc48d30a5d1d8d30025e7212ca 316 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 118 137 1.2E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Amir_4790 207a56bc48d30a5d1d8d30025e7212ca 316 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 162 178 1.2E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Amir_4790 207a56bc48d30a5d1d8d30025e7212ca 316 SUPERFAMILY SSF55869 22 83 6.67E-20 T 14-10-2018 IPR035447 DNA topoisomerase I, N-terminal Amir_4790 207a56bc48d30a5d1d8d30025e7212ca 316 Gene3D G3DSA:3.30.66.10 12 89 6.7E-31 T 14-10-2018 IPR035447 DNA topoisomerase I, N-terminal Amir_4790 207a56bc48d30a5d1d8d30025e7212ca 316 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 82 279 4.3E-22 T 14-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 Amir_4790 207a56bc48d30a5d1d8d30025e7212ca 316 Gene3D G3DSA:3.90.15.10 113 226 1.1E-56 T 14-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 Amir_4790 207a56bc48d30a5d1d8d30025e7212ca 316 SUPERFAMILY SSF56349 78 295 3.53E-52 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amir_0139 a21d8a9ff24d4c99d4b2d8137115b772 324 Pfam PF13602 Zinc-binding dehydrogenase 183 321 1.4E-21 T 14-10-2018 Amir_0139 a21d8a9ff24d4c99d4b2d8137115b772 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 87 3.3E-9 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_0139 a21d8a9ff24d4c99d4b2d8137115b772 324 Gene3D G3DSA:3.40.50.720 120 256 3.1E-97 T 14-10-2018 Amir_0139 a21d8a9ff24d4c99d4b2d8137115b772 324 SMART SM00829 10 321 6.1E-32 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_0139 a21d8a9ff24d4c99d4b2d8137115b772 324 SUPERFAMILY SSF51735 111 264 2.45E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0139 a21d8a9ff24d4c99d4b2d8137115b772 324 SUPERFAMILY SSF50129 1 140 2.74E-39 T 14-10-2018 IPR011032 GroES-like superfamily Amir_0139 a21d8a9ff24d4c99d4b2d8137115b772 324 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 322 1.1E-128 T 14-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 Amir_0139 a21d8a9ff24d4c99d4b2d8137115b772 324 Gene3D G3DSA:3.90.180.10 13 321 3.1E-97 T 14-10-2018 Amir_0139 a21d8a9ff24d4c99d4b2d8137115b772 324 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Amir_6520 b860bf273ad3a613af82b20db17f8fcf 466 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 41 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_6520 b860bf273ad3a613af82b20db17f8fcf 466 SUPERFAMILY SSF56112 8 450 2.43E-76 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_6520 b860bf273ad3a613af82b20db17f8fcf 466 SMART SM00220 12 267 1.9E-61 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_6520 b860bf273ad3a613af82b20db17f8fcf 466 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 135 147 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_6520 b860bf273ad3a613af82b20db17f8fcf 466 Pfam PF00069 Protein kinase domain 12 264 1.1E-49 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_6520 b860bf273ad3a613af82b20db17f8fcf 466 Gene3D G3DSA:1.10.510.10 91 275 3.6E-45 T 14-10-2018 Amir_6520 b860bf273ad3a613af82b20db17f8fcf 466 PIRSF PIRSF000654 15 276 4.6E-22 T 14-10-2018 Amir_6520 b860bf273ad3a613af82b20db17f8fcf 466 Gene3D G3DSA:3.30.200.20 2 90 6.8E-30 T 14-10-2018 Amir_3547 7681ffcc4fbefdc63883ffbe7c491a8a 399 Gene3D G3DSA:1.20.1250.20 208 397 1.5E-15 T 14-10-2018 Amir_3547 7681ffcc4fbefdc63883ffbe7c491a8a 399 SUPERFAMILY SSF103473 16 388 4.45E-51 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_3547 7681ffcc4fbefdc63883ffbe7c491a8a 399 Gene3D G3DSA:1.20.1250.20 17 205 7.7E-22 T 14-10-2018 Amir_3547 7681ffcc4fbefdc63883ffbe7c491a8a 399 Pfam PF07690 Major Facilitator Superfamily 22 275 1.2E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_4867 ea6ceef1de2b3a42e7f829231286c8ea 653 Gene3D G3DSA:3.50.50.60 469 646 1.1E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4867 ea6ceef1de2b3a42e7f829231286c8ea 653 Gene3D G3DSA:3.50.50.60 113 397 1.1E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4867 ea6ceef1de2b3a42e7f829231286c8ea 653 SUPERFAMILY SSF51905 118 370 2.59E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4867 ea6ceef1de2b3a42e7f829231286c8ea 653 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 119 141 2.7E-5 T 14-10-2018 Amir_4867 ea6ceef1de2b3a42e7f829231286c8ea 653 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 296 321 2.7E-5 T 14-10-2018 Amir_4867 ea6ceef1de2b3a42e7f829231286c8ea 653 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 119 330 8.1E-10 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_4867 ea6ceef1de2b3a42e7f829231286c8ea 653 SUPERFAMILY SSF51905 431 642 3.3E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3376 9a18c2456ed6c7c821d50f80ff7b2da7 586 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 426 445 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Amir_3376 9a18c2456ed6c7c821d50f80ff7b2da7 586 SUPERFAMILY SSF52467 156 356 1.77E-36 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amir_3376 9a18c2456ed6c7c821d50f80ff7b2da7 586 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 200 329 6.1E-23 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Amir_3376 9a18c2456ed6c7c821d50f80ff7b2da7 586 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 389 543 5.6E-25 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amir_3376 9a18c2456ed6c7c821d50f80ff7b2da7 586 SUPERFAMILY SSF52518 365 562 9.29E-47 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_3376 9a18c2456ed6c7c821d50f80ff7b2da7 586 Gene3D G3DSA:3.40.50.970 1 178 6.7E-54 T 14-10-2018 Amir_3376 9a18c2456ed6c7c821d50f80ff7b2da7 586 Gene3D G3DSA:3.40.50.970 346 566 2.0E-48 T 14-10-2018 Amir_3376 9a18c2456ed6c7c821d50f80ff7b2da7 586 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 172 5.5E-45 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Amir_3376 9a18c2456ed6c7c821d50f80ff7b2da7 586 SUPERFAMILY SSF52518 4 178 3.05E-45 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_3376 9a18c2456ed6c7c821d50f80ff7b2da7 586 Gene3D G3DSA:3.40.50.1220 187 342 3.9E-40 T 14-10-2018 Amir_2151 d02ffa411b9fa083c56e4d897fe53414 217 SUPERFAMILY SSF52172 2 181 1.01E-33 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2151 d02ffa411b9fa083c56e4d897fe53414 217 SMART SM00448 1 109 1.1E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2151 d02ffa411b9fa083c56e4d897fe53414 217 Gene3D G3DSA:3.40.50.2300 1 114 2.2E-29 T 14-10-2018 Amir_2151 d02ffa411b9fa083c56e4d897fe53414 217 Gene3D G3DSA:1.10.10.10 115 216 1.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2151 d02ffa411b9fa083c56e4d897fe53414 217 Pfam PF00072 Response regulator receiver domain 3 109 1.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2151 d02ffa411b9fa083c56e4d897fe53414 217 SMART SM00862 143 215 1.7E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2151 d02ffa411b9fa083c56e4d897fe53414 217 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 215 4.1E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_1723 6da196fff5939f8a07e8ca609297426d 494 SMART SM00304 203 265 1.0E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_1723 6da196fff5939f8a07e8ca609297426d 494 Gene3D G3DSA:1.10.287.130 207 340 2.1E-23 T 14-10-2018 Amir_1723 6da196fff5939f8a07e8ca609297426d 494 SMART SM00387 383 494 4.1E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_1723 6da196fff5939f8a07e8ca609297426d 494 SUPERFAMILY SSF47384 262 341 1.67E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_1723 6da196fff5939f8a07e8ca609297426d 494 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 383 493 6.9E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_1723 6da196fff5939f8a07e8ca609297426d 494 Gene3D G3DSA:3.30.565.10 350 494 1.2E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1723 6da196fff5939f8a07e8ca609297426d 494 Pfam PF00512 His Kinase A (phospho-acceptor) domain 275 340 9.0E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_1723 6da196fff5939f8a07e8ca609297426d 494 Pfam PF00672 HAMP domain 203 259 3.7E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_1723 6da196fff5939f8a07e8ca609297426d 494 SUPERFAMILY SSF55874 329 492 5.5E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1723 6da196fff5939f8a07e8ca609297426d 494 SMART SM00388 273 340 3.8E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_1723 6da196fff5939f8a07e8ca609297426d 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 474 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_1723 6da196fff5939f8a07e8ca609297426d 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 449 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_1723 6da196fff5939f8a07e8ca609297426d 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 435 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_1723 6da196fff5939f8a07e8ca609297426d 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 492 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_0282 7e898f8d91e1039e4421be7bfd484c0d 201 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 20 170 1.0E-9 T 14-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal Amir_0282 7e898f8d91e1039e4421be7bfd484c0d 201 SMART SM00943 19 175 2.5E-5 T 14-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal Amir_4436 f09d88843084d70ed6beaf7181067990 480 PRINTS PR00757 Flavin-containing amine oxidase signature 405 424 1.6E-7 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Amir_4436 f09d88843084d70ed6beaf7181067990 480 PRINTS PR00757 Flavin-containing amine oxidase signature 456 473 1.6E-7 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Amir_4436 f09d88843084d70ed6beaf7181067990 480 PRINTS PR00757 Flavin-containing amine oxidase signature 54 73 1.6E-7 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Amir_4436 f09d88843084d70ed6beaf7181067990 480 SUPERFAMILY SSF51905 51 474 4.23E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4436 f09d88843084d70ed6beaf7181067990 480 Gene3D G3DSA:3.90.660.10 130 423 4.0E-106 T 14-10-2018 Amir_4436 f09d88843084d70ed6beaf7181067990 480 Gene3D G3DSA:3.50.50.60 54 467 4.0E-106 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4436 f09d88843084d70ed6beaf7181067990 480 Pfam PF01593 Flavin containing amine oxidoreductase 62 470 5.2E-42 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Amir_4926 ea1c44488e61a6ca852cc50534937ce8 395 Pfam PF13556 PucR C-terminal helix-turn-helix domain 328 385 1.0E-17 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Amir_4926 ea1c44488e61a6ca852cc50534937ce8 395 Gene3D G3DSA:1.10.10.2840 266 391 2.5E-23 T 14-10-2018 Amir_3648 b931c4377405b93a54ecb3a2806a75e3 283 Gene3D G3DSA:1.10.260.40 12 74 6.4E-8 T 14-10-2018 Amir_3648 b931c4377405b93a54ecb3a2806a75e3 283 SUPERFAMILY SSF47413 12 69 2.63E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3648 b931c4377405b93a54ecb3a2806a75e3 283 Pfam PF13560 Helix-turn-helix domain 16 73 7.9E-11 T 14-10-2018 Amir_3648 b931c4377405b93a54ecb3a2806a75e3 283 SMART SM00530 19 73 3.6E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_5069 33e313ba13d37bdf8ea42c18e46eaec1 214 SMART SM00849 14 204 1.8E-34 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_5069 33e313ba13d37bdf8ea42c18e46eaec1 214 Gene3D G3DSA:3.60.15.10 5 214 7.1E-48 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_5069 33e313ba13d37bdf8ea42c18e46eaec1 214 SUPERFAMILY SSF56281 15 211 8.78E-48 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_5069 33e313ba13d37bdf8ea42c18e46eaec1 214 Pfam PF00753 Metallo-beta-lactamase superfamily 14 204 1.7E-28 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 Pfam PF00975 Thioesterase domain 1710 1917 6.9E-23 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 Pfam PF13193 AMP-binding enzyme C-terminal domain 450 528 2.4E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 Pfam PF00550 Phosphopantetheine attachment site 554 614 8.6E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 Pfam PF00550 Phosphopantetheine attachment site 1622 1685 2.0E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 Gene3D G3DSA:3.40.50.1820 1698 1923 1.5E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 SUPERFAMILY SSF47336 1612 1686 6.02E-15 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1257 1268 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 Gene3D G3DSA:3.30.300.30 1508 1607 3.7E-20 T 14-10-2018 Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 Gene3D G3DSA:3.30.559.10 660 1028 6.1E-123 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 SMART SM00823 Phosphopantetheine attachment site 1619 1690 0.0024 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 SMART SM00823 Phosphopantetheine attachment site 552 620 0.0015 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 SUPERFAMILY SSF56801 1076 1632 4.19E-128 T 14-10-2018 Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 61 466 1.8E-132 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1141 1536 2.4E-109 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 Gene3D G3DSA:3.30.559.30 841 1093 6.1E-123 T 14-10-2018 Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 Gene3D G3DSA:3.40.50.12780 30 434 7.7E-137 T 14-10-2018 Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 Pfam PF00668 Condensation domain 656 1096 7.7E-91 T 14-10-2018 IPR001242 Condensation domain Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 Gene3D G3DSA:3.30.300.30 436 540 1.2E-29 T 14-10-2018 Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 SUPERFAMILY SSF52777 660 837 5.34E-47 T 14-10-2018 Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 Gene3D G3DSA:1.10.1200.10 541 622 5.5E-23 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 Gene3D G3DSA:1.10.1200.10 1608 1691 4.0E-21 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 SUPERFAMILY SSF47336 546 614 1.01E-15 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 SUPERFAMILY SSF52777 842 1080 8.34E-52 T 14-10-2018 Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 Pfam PF00501 AMP-binding enzyme 1121 1513 1.2E-75 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 Pfam PF00501 AMP-binding enzyme 41 442 2.8E-98 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 SUPERFAMILY SSF53474 1696 1921 1.08E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 Gene3D G3DSA:3.40.50.12780 1107 1507 3.0E-112 T 14-10-2018 Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 ProSitePatterns PS00012 Phosphopantetheine attachment site. 576 591 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4588 0cb674697be9f789e18e2ebb91378b81 1925 SUPERFAMILY SSF56801 6 564 5.36E-152 T 14-10-2018 Amir_3366 ceda8b4810a8b469c87b66d78745c37e 309 Pfam PF12852 Cupin 20 188 5.0E-30 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain Amir_3366 ceda8b4810a8b469c87b66d78745c37e 309 SMART SM00342 220 302 1.3E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_3366 ceda8b4810a8b469c87b66d78745c37e 309 Gene3D G3DSA:1.10.10.60 202 306 3.5E-23 T 14-10-2018 Amir_3366 ceda8b4810a8b469c87b66d78745c37e 309 SUPERFAMILY SSF46689 256 304 7.17E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3366 ceda8b4810a8b469c87b66d78745c37e 309 Pfam PF12833 Helix-turn-helix domain 226 302 2.6E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_3366 ceda8b4810a8b469c87b66d78745c37e 309 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 286 302 1.0E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amir_3366 ceda8b4810a8b469c87b66d78745c37e 309 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 286 1.0E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amir_3366 ceda8b4810a8b469c87b66d78745c37e 309 SUPERFAMILY SSF46689 206 254 1.51E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_6769 47b25343e8af9318151773efed48f5da 254 Gene3D G3DSA:1.10.490.50 163 252 6.0E-16 T 14-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain Amir_6769 47b25343e8af9318151773efed48f5da 254 SUPERFAMILY SSF46955 3 111 3.15E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_6769 47b25343e8af9318151773efed48f5da 254 SUPERFAMILY SSF89082 165 250 1.57E-16 T 14-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain Amir_6769 47b25343e8af9318151773efed48f5da 254 Pfam PF13411 MerR HTH family regulatory protein 4 70 9.6E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6769 47b25343e8af9318151773efed48f5da 254 SMART SM00422 3 72 2.1E-22 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6769 47b25343e8af9318151773efed48f5da 254 Gene3D G3DSA:1.10.1660.10 1 140 1.3E-34 T 14-10-2018 Amir_6769 47b25343e8af9318151773efed48f5da 254 Pfam PF07739 TipAS antibiotic-recognition domain 131 248 3.3E-26 T 14-10-2018 IPR012925 TipAS antibiotic-recognition domain Amir_3978 60856c826807e92d842756d9d5c8ca81 400 Pfam PF07690 Major Facilitator Superfamily 21 277 1.7E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_3978 60856c826807e92d842756d9d5c8ca81 400 Gene3D G3DSA:1.20.1250.20 15 201 1.5E-17 T 14-10-2018 Amir_3978 60856c826807e92d842756d9d5c8ca81 400 Gene3D G3DSA:1.20.1250.20 218 399 3.6E-13 T 14-10-2018 Amir_3978 60856c826807e92d842756d9d5c8ca81 400 SUPERFAMILY SSF103473 8 397 8.5E-37 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_6580 1db025b5dd26bfa942d78d1c608a4f9b 519 Pfam PF00082 Subtilase family 148 379 1.6E-36 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_6580 1db025b5dd26bfa942d78d1c608a4f9b 519 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 190 200 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Amir_6580 1db025b5dd26bfa942d78d1c608a4f9b 519 SUPERFAMILY SSF54897 51 116 3.68E-13 T 14-10-2018 Amir_6580 1db025b5dd26bfa942d78d1c608a4f9b 519 PRINTS PR00723 Subtilisin serine protease family (S8) signature 340 356 1.5E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_6580 1db025b5dd26bfa942d78d1c608a4f9b 519 PRINTS PR00723 Subtilisin serine protease family (S8) signature 186 199 1.5E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_6580 1db025b5dd26bfa942d78d1c608a4f9b 519 PRINTS PR00723 Subtilisin serine protease family (S8) signature 148 167 1.5E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_6580 1db025b5dd26bfa942d78d1c608a4f9b 519 SUPERFAMILY SSF52743 125 387 1.13E-71 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_6580 1db025b5dd26bfa942d78d1c608a4f9b 519 Pfam PF01483 Proprotein convertase P-domain 441 519 1.2E-16 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 Amir_6580 1db025b5dd26bfa942d78d1c608a4f9b 519 Gene3D G3DSA:2.60.120.260 411 519 5.2E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_6580 1db025b5dd26bfa942d78d1c608a4f9b 519 Gene3D G3DSA:3.30.70.80 43 116 9.0E-20 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Amir_6580 1db025b5dd26bfa942d78d1c608a4f9b 519 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 153 164 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_6580 1db025b5dd26bfa942d78d1c608a4f9b 519 Gene3D G3DSA:3.40.50.200 121 396 3.9E-85 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_6580 1db025b5dd26bfa942d78d1c608a4f9b 519 SUPERFAMILY SSF49785 421 519 8.5E-18 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_6580 1db025b5dd26bfa942d78d1c608a4f9b 519 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 341 351 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_6580 1db025b5dd26bfa942d78d1c608a4f9b 519 Pfam PF05922 Peptidase inhibitor I9 71 116 2.4E-8 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Amir_2606 276a5de432f2315d66a10aecd83ee157 128 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 12 110 3.3E-15 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Amir_2606 276a5de432f2315d66a10aecd83ee157 128 SUPERFAMILY SSF52091 13 118 4.08E-16 T 14-10-2018 IPR036513 STAS domain superfamily Amir_2606 276a5de432f2315d66a10aecd83ee157 128 Gene3D G3DSA:3.30.750.24 7 123 7.2E-25 T 14-10-2018 IPR036513 STAS domain superfamily Amir_2606 276a5de432f2315d66a10aecd83ee157 128 Pfam PF01740 STAS domain 15 107 2.0E-10 T 14-10-2018 IPR002645 STAS domain Amir_0422 65904b340178b340a5bf2c62f22a6e69 334 Gene3D G3DSA:3.90.180.10 12 330 4.1E-92 T 14-10-2018 Amir_0422 65904b340178b340a5bf2c62f22a6e69 334 SUPERFAMILY SSF51735 126 280 1.3E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0422 65904b340178b340a5bf2c62f22a6e69 334 SUPERFAMILY SSF50129 5 150 2.13E-38 T 14-10-2018 IPR011032 GroES-like superfamily Amir_0422 65904b340178b340a5bf2c62f22a6e69 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 97 3.4E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_0422 65904b340178b340a5bf2c62f22a6e69 334 Gene3D G3DSA:3.40.50.720 137 282 4.1E-92 T 14-10-2018 Amir_0422 65904b340178b340a5bf2c62f22a6e69 334 Pfam PF13602 Zinc-binding dehydrogenase 211 331 4.0E-25 T 14-10-2018 Amir_0422 65904b340178b340a5bf2c62f22a6e69 334 SMART SM00829 14 331 1.8E-13 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_2750 bbfc1744c10517c2d9f11fc64d298375 2447 SMART SM00758 775 922 1.2E-10 T 14-10-2018 IPR011658 PA14 domain Amir_2750 bbfc1744c10517c2d9f11fc64d298375 2447 SUPERFAMILY SSF49899 1393 1598 1.31E-29 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_2750 bbfc1744c10517c2d9f11fc64d298375 2447 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2203 2293 1.1E-11 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 Amir_2750 bbfc1744c10517c2d9f11fc64d298375 2447 Gene3D G3DSA:2.60.40.10 615 727 3.2E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2750 bbfc1744c10517c2d9f11fc64d298375 2447 ProDom PD039135 WALL-ASSOCIATED REPEAT PROTEIN CELL WALL HYDROLASE PRECURSOR SIGNAL TRANSMEMBRANE RETICULOCYTE 110 284 3.0E-5 T 14-10-2018 Amir_2750 bbfc1744c10517c2d9f11fc64d298375 2447 Pfam PF07691 PA14 domain 1299 1384 2.9E-5 T 14-10-2018 IPR011658 PA14 domain Amir_2750 bbfc1744c10517c2d9f11fc64d298375 2447 Pfam PF07691 PA14 domain 777 905 7.2E-17 T 14-10-2018 IPR011658 PA14 domain Amir_2750 bbfc1744c10517c2d9f11fc64d298375 2447 Gene3D G3DSA:2.180.10.10 1762 2293 9.5E-22 T 14-10-2018 Amir_2750 bbfc1744c10517c2d9f11fc64d298375 2447 SUPERFAMILY SSF56988 777 1100 6.15E-29 T 14-10-2018 Amir_2750 bbfc1744c10517c2d9f11fc64d298375 2447 Gene3D G3DSA:2.60.120.200 1391 1599 3.7E-29 T 14-10-2018 Amir_2750 bbfc1744c10517c2d9f11fc64d298375 2447 SMART SM00560 1457 1594 7.0E-4 T 14-10-2018 IPR006558 LamG-like jellyroll fold Amir_2750 bbfc1744c10517c2d9f11fc64d298375 2447 Gene3D G3DSA:3.90.182.10 766 955 2.7E-15 T 14-10-2018 Amir_2750 bbfc1744c10517c2d9f11fc64d298375 2447 Gene3D G3DSA:3.90.182.10 1291 1390 6.7E-6 T 14-10-2018 Amir_2750 bbfc1744c10517c2d9f11fc64d298375 2447 SUPERFAMILY SSF56988 1300 1388 9.55E-9 T 14-10-2018 Amir_2750 bbfc1744c10517c2d9f11fc64d298375 2447 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 1444 1597 2.3E-27 T 14-10-2018 Amir_6577 a89390e925ab8d66c5b88ec14107b009 442 Pfam PF11203 Putative type VII ESX secretion system translocon, EccE 247 349 2.9E-24 T 14-10-2018 IPR021368 Type VII secretion system protein EccE Amir_6577 a89390e925ab8d66c5b88ec14107b009 442 TIGRFAM TIGR03923 T7SS_EccE: type VII secretion protein EccE 68 440 2.1E-52 T 14-10-2018 IPR021368 Type VII secretion system protein EccE Amir_0856 9ca0ee120a5365f05cff721d1e172659 301 SUPERFAMILY SSF46785 9 89 7.04E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0856 9ca0ee120a5365f05cff721d1e172659 301 Gene3D G3DSA:1.10.10.10 7 92 4.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0856 9ca0ee120a5365f05cff721d1e172659 301 Gene3D G3DSA:3.40.190.10 106 279 1.3E-12 T 14-10-2018 Amir_0856 9ca0ee120a5365f05cff721d1e172659 301 Gene3D G3DSA:3.40.190.10 169 261 1.3E-12 T 14-10-2018 Amir_0856 9ca0ee120a5365f05cff721d1e172659 301 SUPERFAMILY SSF53850 105 284 7.14E-16 T 14-10-2018 Amir_0856 9ca0ee120a5365f05cff721d1e172659 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 3.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_0856 9ca0ee120a5365f05cff721d1e172659 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 3.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_0856 9ca0ee120a5365f05cff721d1e172659 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 3.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_0856 9ca0ee120a5365f05cff721d1e172659 301 Pfam PF03466 LysR substrate binding domain 105 283 4.3E-15 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_0856 9ca0ee120a5365f05cff721d1e172659 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 3.0E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_1671 63729db2521b232e6f14d5743a94ac16 248 Pfam PF00005 ABC transporter 20 172 6.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1671 63729db2521b232e6f14d5743a94ac16 248 Gene3D G3DSA:3.40.50.300 1 240 1.4E-58 T 14-10-2018 Amir_1671 63729db2521b232e6f14d5743a94ac16 248 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 4 242 6.8E-99 T 14-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD Amir_1671 63729db2521b232e6f14d5743a94ac16 248 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 223 241 6.2E-6 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Amir_1671 63729db2521b232e6f14d5743a94ac16 248 SUPERFAMILY SSF52540 4 241 2.24E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1671 63729db2521b232e6f14d5743a94ac16 248 SMART SM00382 29 219 5.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6422 50ce3a73b62a551124d5e2963f5ec2c0 542 Gene3D G3DSA:3.40.120.10 322 438 2.7E-25 T 14-10-2018 Amir_6422 50ce3a73b62a551124d5e2963f5ec2c0 542 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 150 159 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6422 50ce3a73b62a551124d5e2963f5ec2c0 542 Gene3D G3DSA:3.40.120.10 44 200 5.1E-45 T 14-10-2018 Amir_6422 50ce3a73b62a551124d5e2963f5ec2c0 542 Gene3D G3DSA:3.30.310.50 451 519 3.3E-5 T 14-10-2018 Amir_6422 50ce3a73b62a551124d5e2963f5ec2c0 542 SUPERFAMILY SSF53738 302 438 1.06E-25 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6422 50ce3a73b62a551124d5e2963f5ec2c0 542 SUPERFAMILY SSF53738 212 309 2.0E-21 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6422 50ce3a73b62a551124d5e2963f5ec2c0 542 SUPERFAMILY SSF55957 440 512 3.14E-10 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6422 50ce3a73b62a551124d5e2963f5ec2c0 542 SUPERFAMILY SSF53738 42 234 9.03E-42 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6422 50ce3a73b62a551124d5e2963f5ec2c0 542 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 323 430 7.8E-16 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6422 50ce3a73b62a551124d5e2963f5ec2c0 542 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 54 189 4.9E-38 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6422 50ce3a73b62a551124d5e2963f5ec2c0 542 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 223 309 5.3E-23 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6422 50ce3a73b62a551124d5e2963f5ec2c0 542 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 481 522 6.4E-9 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6422 50ce3a73b62a551124d5e2963f5ec2c0 542 Gene3D G3DSA:3.40.120.10 211 321 7.0E-22 T 14-10-2018 Amir_6422 50ce3a73b62a551124d5e2963f5ec2c0 542 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 227 246 7.2E-9 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6422 50ce3a73b62a551124d5e2963f5ec2c0 542 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 149 163 7.2E-9 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6422 50ce3a73b62a551124d5e2963f5ec2c0 542 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 294 309 7.2E-9 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_5142 2f7a98ebd185fcd78ba617e0a48283e2 522 SMART SM00471 60 262 5.0E-12 T 14-10-2018 IPR003607 HD/PDEase domain Amir_5142 2f7a98ebd185fcd78ba617e0a48283e2 522 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 27 508 1.6E-58 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 Amir_5142 2f7a98ebd185fcd78ba617e0a48283e2 522 SUPERFAMILY SSF109604 27 275 1.23E-47 T 14-10-2018 Amir_5142 2f7a98ebd185fcd78ba617e0a48283e2 522 Pfam PF01966 HD domain 64 129 1.1E-9 T 14-10-2018 IPR006674 HD domain Amir_5142 2f7a98ebd185fcd78ba617e0a48283e2 522 Gene3D G3DSA:1.10.3210.10 2 312 2.0E-64 T 14-10-2018 Amir_1734 0e359b7bdd94cc7016e56212124ce3a6 371 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 10 366 3.3E-115 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Amir_1734 0e359b7bdd94cc7016e56212124ce3a6 371 Gene3D G3DSA:3.40.640.10 1 250 6.2E-96 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_1734 0e359b7bdd94cc7016e56212124ce3a6 371 SUPERFAMILY SSF53383 2 368 4.03E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_1734 0e359b7bdd94cc7016e56212124ce3a6 371 PIRSF PIRSF000390 1 371 2.7E-108 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Amir_1734 0e359b7bdd94cc7016e56212124ce3a6 371 Gene3D G3DSA:3.90.1150.10 251 370 1.2E-24 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 TIGRFAM TIGR00492 alr: alanine racemase 28 386 6.9E-96 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 Gene3D G3DSA:2.40.37.10 32 387 9.7E-129 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 Pfam PF00842 Alanine racemase, C-terminal domain 260 387 6.1E-43 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 SUPERFAMILY SSF50621 253 387 9.77E-46 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 Hamap MF_01201 Alanine racemase. 25 388 32.795 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 Pfam PF01168 Alanine racemase, N-terminal domain 32 250 2.7E-68 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 Gene3D G3DSA:3.20.20.10 34 245 9.7E-129 T 14-10-2018 IPR029066 PLP-binding barrel Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 SMART SM01005 260 388 9.9E-58 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 PRINTS PR00992 Alanine racemase signature 50 66 2.9E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 PRINTS PR00992 Alanine racemase signature 314 331 2.9E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 PRINTS PR00992 Alanine racemase signature 86 104 2.9E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 PRINTS PR00992 Alanine racemase signature 223 250 2.9E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 PRINTS PR00992 Alanine racemase signature 293 308 2.9E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 PRINTS PR00992 Alanine racemase signature 181 192 2.9E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 PRINTS PR00992 Alanine racemase signature 369 382 2.9E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 PRINTS PR00992 Alanine racemase signature 276 291 2.9E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 PRINTS PR00992 Alanine racemase signature 147 159 2.9E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 55 65 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_6556 d6235e87bb23a0bda4403dda39ba7356 388 SUPERFAMILY SSF51419 32 261 5.23E-65 T 14-10-2018 IPR029066 PLP-binding barrel Amir_0836 f9990a41e7e8cc8852276f1ff9379ed4 495 Gene3D G3DSA:3.50.50.60 109 246 5.5E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0836 f9990a41e7e8cc8852276f1ff9379ed4 495 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 298 9.6E-50 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_0836 f9990a41e7e8cc8852276f1ff9379ed4 495 SUPERFAMILY SSF51905 151 307 7.9E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0836 f9990a41e7e8cc8852276f1ff9379ed4 495 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 467 3.9E-12 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Amir_0836 f9990a41e7e8cc8852276f1ff9379ed4 495 SUPERFAMILY SSF51905 3 196 8.91E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0836 f9990a41e7e8cc8852276f1ff9379ed4 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.8E-19 T 14-10-2018 Amir_0836 f9990a41e7e8cc8852276f1ff9379ed4 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 1.8E-19 T 14-10-2018 Amir_0836 f9990a41e7e8cc8852276f1ff9379ed4 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 1.8E-19 T 14-10-2018 Amir_0836 f9990a41e7e8cc8852276f1ff9379ed4 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.8E-19 T 14-10-2018 Amir_0836 f9990a41e7e8cc8852276f1ff9379ed4 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.8E-19 T 14-10-2018 Amir_0836 f9990a41e7e8cc8852276f1ff9379ed4 495 Gene3D G3DSA:3.50.50.60 5 282 5.5E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0836 f9990a41e7e8cc8852276f1ff9379ed4 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.9E-9 T 14-10-2018 Amir_0836 f9990a41e7e8cc8852276f1ff9379ed4 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 177 1.9E-9 T 14-10-2018 Amir_0836 f9990a41e7e8cc8852276f1ff9379ed4 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 1.9E-9 T 14-10-2018 Amir_0836 f9990a41e7e8cc8852276f1ff9379ed4 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.9E-9 T 14-10-2018 Amir_0836 f9990a41e7e8cc8852276f1ff9379ed4 495 Gene3D G3DSA:1.10.10.1100 416 481 1.6E-9 T 14-10-2018 Amir_5893 f64bb5c7562548a36c09fcc8bfc272be 218 SMART SM00448 2 115 5.1E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5893 f64bb5c7562548a36c09fcc8bfc272be 218 Gene3D G3DSA:3.40.50.12740 2 214 2.1E-66 T 14-10-2018 Amir_5893 f64bb5c7562548a36c09fcc8bfc272be 218 Pfam PF00072 Response regulator receiver domain 4 115 1.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5893 f64bb5c7562548a36c09fcc8bfc272be 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 1.2E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5893 f64bb5c7562548a36c09fcc8bfc272be 218 SUPERFAMILY SSF46894 143 214 8.84E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_5893 f64bb5c7562548a36c09fcc8bfc272be 218 SMART SM00421 152 209 6.8E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5893 f64bb5c7562548a36c09fcc8bfc272be 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5893 f64bb5c7562548a36c09fcc8bfc272be 218 SUPERFAMILY SSF52172 2 133 4.55E-34 T 14-10-2018 IPR011006 CheY-like superfamily Amir_5893 f64bb5c7562548a36c09fcc8bfc272be 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 8.5E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5893 f64bb5c7562548a36c09fcc8bfc272be 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 8.5E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5893 f64bb5c7562548a36c09fcc8bfc272be 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 8.5E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0537 61f0def73b0282f4df837351aeed4d95 594 Gene3D G3DSA:1.10.287.1060 85 169 7.9E-5 T 14-10-2018 Amir_0537 61f0def73b0282f4df837351aeed4d95 594 SUPERFAMILY SSF140453 86 171 2.22E-6 T 14-10-2018 IPR036689 ESAT-6-like superfamily Amir_2658 cdaa06a3a0815c7177d4c07a3bcba3fd 328 Gene3D G3DSA:3.30.9.10 81 271 1.1E-21 T 14-10-2018 Amir_2658 cdaa06a3a0815c7177d4c07a3bcba3fd 328 SUPERFAMILY SSF51905 1 237 3.5E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2658 cdaa06a3a0815c7177d4c07a3bcba3fd 328 Pfam PF01266 FAD dependent oxidoreductase 3 323 5.8E-26 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Amir_2658 cdaa06a3a0815c7177d4c07a3bcba3fd 328 Gene3D G3DSA:3.50.50.60 5 202 1.1E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1050 dda0bd4f0c6a1637b1f262eacfd2d708 361 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 62 74 - T 14-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 Amir_1050 dda0bd4f0c6a1637b1f262eacfd2d708 361 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 1 178 4.5E-42 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Amir_1050 dda0bd4f0c6a1637b1f262eacfd2d708 361 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 325 343 - T 14-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 Amir_1050 dda0bd4f0c6a1637b1f262eacfd2d708 361 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 141 154 3.4E-6 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Amir_1050 dda0bd4f0c6a1637b1f262eacfd2d708 361 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 100 114 3.4E-6 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Amir_1050 dda0bd4f0c6a1637b1f262eacfd2d708 361 SUPERFAMILY SSF53335 2 343 1.51E-82 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_1050 dda0bd4f0c6a1637b1f262eacfd2d708 361 Gene3D G3DSA:3.40.50.150 1 181 2.2E-56 T 14-10-2018 Amir_1050 dda0bd4f0c6a1637b1f262eacfd2d708 361 Gene3D G3DSA:3.90.120.10 207 336 1.1E-22 T 14-10-2018 Amir_1050 dda0bd4f0c6a1637b1f262eacfd2d708 361 Pfam PF00145 C-5 cytosine-specific DNA methylase 1 342 4.9E-57 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Amir_0766 834614f5f1047ba5fae417d513bac27e 283 Gene3D G3DSA:3.40.50.10320 3 283 1.4E-100 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Amir_0766 834614f5f1047ba5fae417d513bac27e 283 SUPERFAMILY SSF102588 6 269 4.45E-63 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Amir_0766 834614f5f1047ba5fae417d513bac27e 283 TIGRFAM TIGR03445 mycothiol_MshB: N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase 10 281 1.9E-103 T 14-10-2018 IPR017810 Mycothiol biosynthesis protein, MshB GO:0035595 Amir_0766 834614f5f1047ba5fae417d513bac27e 283 Pfam PF02585 GlcNAc-PI de-N-acetylase 10 160 3.3E-26 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 Amir_0766 834614f5f1047ba5fae417d513bac27e 283 Hamap MF_01696 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase [mshB]. 9 281 40.54 T 14-10-2018 IPR017810 Mycothiol biosynthesis protein, MshB GO:0035595 Amir_3903 ab4a1e57a883990f607504d9e2b64597 314 SUPERFAMILY SSF51735 118 245 2.39E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3903 ab4a1e57a883990f607504d9e2b64597 314 SMART SM00829 10 309 3.0E-13 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_3903 ab4a1e57a883990f607504d9e2b64597 314 SUPERFAMILY SSF50129 1 149 3.04E-38 T 14-10-2018 IPR011032 GroES-like superfamily Amir_3903 ab4a1e57a883990f607504d9e2b64597 314 Pfam PF13602 Zinc-binding dehydrogenase 188 309 1.9E-14 T 14-10-2018 Amir_3903 ab4a1e57a883990f607504d9e2b64597 314 Gene3D G3DSA:3.90.180.10 8 308 1.6E-77 T 14-10-2018 Amir_3903 ab4a1e57a883990f607504d9e2b64597 314 Gene3D G3DSA:3.40.50.720 128 260 1.6E-77 T 14-10-2018 Amir_3903 ab4a1e57a883990f607504d9e2b64597 314 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 88 2.0E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_2771 a0fbe1f9aa319a18d350d15644fde601 243 Gene3D G3DSA:3.40.30.10 59 242 1.8E-40 T 14-10-2018 Amir_2771 a0fbe1f9aa319a18d350d15644fde601 243 SUPERFAMILY SSF52833 69 220 9.14E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_2771 a0fbe1f9aa319a18d350d15644fde601 243 Pfam PF13462 Thioredoxin 71 220 2.4E-24 T 14-10-2018 IPR012336 Thioredoxin-like fold Amir_5722 b78d55e2ee859aa013d9b22b3f40bbc4 438 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 35 435 9.5E-136 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amir_5722 b78d55e2ee859aa013d9b22b3f40bbc4 438 Gene3D G3DSA:3.40.50.1980 28 236 2.5E-58 T 14-10-2018 Amir_5722 b78d55e2ee859aa013d9b22b3f40bbc4 438 PRINTS PR00083 Histidinol dehydrogenase signature 35 59 9.4E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amir_5722 b78d55e2ee859aa013d9b22b3f40bbc4 438 PRINTS PR00083 Histidinol dehydrogenase signature 208 233 9.4E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amir_5722 b78d55e2ee859aa013d9b22b3f40bbc4 438 PRINTS PR00083 Histidinol dehydrogenase signature 136 162 9.4E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amir_5722 b78d55e2ee859aa013d9b22b3f40bbc4 438 PRINTS PR00083 Histidinol dehydrogenase signature 259 278 9.4E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amir_5722 b78d55e2ee859aa013d9b22b3f40bbc4 438 PRINTS PR00083 Histidinol dehydrogenase signature 329 354 9.4E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amir_5722 b78d55e2ee859aa013d9b22b3f40bbc4 438 PRINTS PR00083 Histidinol dehydrogenase signature 370 388 9.4E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amir_5722 b78d55e2ee859aa013d9b22b3f40bbc4 438 PRINTS PR00083 Histidinol dehydrogenase signature 173 199 9.4E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amir_5722 b78d55e2ee859aa013d9b22b3f40bbc4 438 PRINTS PR00083 Histidinol dehydrogenase signature 237 258 9.4E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amir_5722 b78d55e2ee859aa013d9b22b3f40bbc4 438 Gene3D G3DSA:3.40.50.1980 237 380 3.9E-48 T 14-10-2018 Amir_5722 b78d55e2ee859aa013d9b22b3f40bbc4 438 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 237 269 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 Amir_5722 b78d55e2ee859aa013d9b22b3f40bbc4 438 PIRSF PIRSF000099 2 438 2.4E-146 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amir_5722 b78d55e2ee859aa013d9b22b3f40bbc4 438 SUPERFAMILY SSF53720 27 435 1.08E-67 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_5722 b78d55e2ee859aa013d9b22b3f40bbc4 438 Pfam PF00815 Histidinol dehydrogenase 22 436 3.2E-151 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amir_5722 b78d55e2ee859aa013d9b22b3f40bbc4 438 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 436 37.781 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amir_2542 fc0755d0a405e948f39c90b786ddf2a7 155 Gene3D G3DSA:3.30.70.920 54 137 4.0E-17 T 14-10-2018 Amir_2542 fc0755d0a405e948f39c90b786ddf2a7 155 SUPERFAMILY SSF54909 62 148 1.61E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_2542 fc0755d0a405e948f39c90b786ddf2a7 155 SUPERFAMILY SSF46785 1 60 5.97E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2542 fc0755d0a405e948f39c90b786ddf2a7 155 Gene3D G3DSA:1.10.10.10 4 53 8.8E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2542 fc0755d0a405e948f39c90b786ddf2a7 155 SMART SM00344 1 110 2.4E-18 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Amir_2542 fc0755d0a405e948f39c90b786ddf2a7 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.0E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_2542 fc0755d0a405e948f39c90b786ddf2a7 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.0E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_2542 fc0755d0a405e948f39c90b786ddf2a7 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.0E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_2542 fc0755d0a405e948f39c90b786ddf2a7 155 Pfam PF01037 Lrp/AsnC ligand binding domain 68 139 1.9E-13 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Amir_2542 fc0755d0a405e948f39c90b786ddf2a7 155 Pfam PF13404 AsnC-type helix-turn-helix domain 2 42 5.6E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_6297 b47e396b1c36e04992933df07afca3d2 335 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 72 326 2.3E-44 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Amir_6297 b47e396b1c36e04992933df07afca3d2 335 Gene3D G3DSA:1.10.40.50 266 334 5.3E-6 T 14-10-2018 Amir_6297 b47e396b1c36e04992933df07afca3d2 335 Gene3D G3DSA:3.40.50.300 100 265 1.2E-36 T 14-10-2018 Amir_6297 b47e396b1c36e04992933df07afca3d2 335 Pfam PF03193 RsgA GTPase 97 265 2.9E-41 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 Amir_6297 b47e396b1c36e04992933df07afca3d2 335 SUPERFAMILY SSF52540 115 287 1.83E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6297 b47e396b1c36e04992933df07afca3d2 335 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 35 332 25.236 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Amir_5122 dcd07ba2c5b1290a167776975a49ffc1 347 SUPERFAMILY SSF53613 10 298 2.49E-49 T 14-10-2018 IPR029056 Ribokinase-like Amir_5122 dcd07ba2c5b1290a167776975a49ffc1 347 Gene3D G3DSA:3.40.1190.20 7 315 2.5E-53 T 14-10-2018 IPR029056 Ribokinase-like Amir_5122 dcd07ba2c5b1290a167776975a49ffc1 347 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Amir_5122 dcd07ba2c5b1290a167776975a49ffc1 347 Pfam PF00294 pfkB family carbohydrate kinase 44 295 1.3E-25 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Amir_5252 7fed7b4a80e04e0e67fbfa1ea8e53016 146 PIRSF PIRSF001399 1 145 7.4E-59 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_5252 7fed7b4a80e04e0e67fbfa1ea8e53016 146 Gene3D G3DSA:3.40.50.9100 1 144 1.7E-61 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_5252 7fed7b4a80e04e0e67fbfa1ea8e53016 146 SUPERFAMILY SSF52304 2 142 3.66E-57 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_5252 7fed7b4a80e04e0e67fbfa1ea8e53016 146 ProSitePatterns PS01029 Dehydroquinase class II signature. 6 23 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_5252 7fed7b4a80e04e0e67fbfa1ea8e53016 146 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 140 1.0E-49 T 14-10-2018 Amir_5252 7fed7b4a80e04e0e67fbfa1ea8e53016 146 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 141 5.0E-60 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_5252 7fed7b4a80e04e0e67fbfa1ea8e53016 146 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 146 64.607 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_5252 7fed7b4a80e04e0e67fbfa1ea8e53016 146 Pfam PF01220 Dehydroquinase class II 3 138 9.1E-56 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_5175 d4ebc6b64e22dbd6487f4f7debb6f899 286 SUPERFAMILY SSF56059 86 272 5.18E-10 T 14-10-2018 Amir_1787 8f065f30d542c49d93ae99fc56882ef2 272 Gene3D G3DSA:1.10.3720.10 2 263 2.8E-54 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1787 8f065f30d542c49d93ae99fc56882ef2 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 258 2.6E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_1787 8f065f30d542c49d93ae99fc56882ef2 272 SUPERFAMILY SSF161098 4 272 1.4E-60 T 14-10-2018 IPR035906 MetI-like superfamily Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 SUPERFAMILY SSF47323 421 550 3.86E-34 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 Pfam PF05746 DALR anticodon binding domain 427 550 1.1E-36 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 SMART SM01016 4 93 2.0E-30 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 31 550 6.0E-127 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 Gene3D G3DSA:3.30.1360.70 5 111 7.0E-23 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 Gene3D G3DSA:3.40.50.620 122 421 1.9E-148 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 Hamap MF_00123 Arginine--tRNA ligase [argS]. 8 550 25.8 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 18 93 1.4E-21 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 SUPERFAMILY SSF52374 116 438 2.68E-82 T 14-10-2018 Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 SMART SM00836 427 550 2.2E-51 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 PRINTS PR01038 Arginyl-tRNA synthetase signature 137 153 1.5E-22 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 PRINTS PR01038 Arginyl-tRNA synthetase signature 122 137 1.5E-22 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 PRINTS PR01038 Arginyl-tRNA synthetase signature 296 317 1.5E-22 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 PRINTS PR01038 Arginyl-tRNA synthetase signature 161 174 1.5E-22 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 Pfam PF00750 tRNA synthetases class I (R) 120 389 5.4E-15 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 SUPERFAMILY SSF55190 8 113 2.22E-23 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 132 141 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_6158 3cd1a5fc95dbf70f0443dd7493f26d94 550 Gene3D G3DSA:1.10.730.10 422 550 1.9E-148 T 14-10-2018 Amir_1930 3a8f67ade61e529bb4641161cbc621ab 500 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 291 486 1.4E-34 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 Amir_1930 3a8f67ade61e529bb4641161cbc621ab 500 Gene3D G3DSA:3.20.20.80 18 381 1.2E-204 T 14-10-2018 Amir_1930 3a8f67ade61e529bb4641161cbc621ab 500 SUPERFAMILY SSF51011 369 493 1.04E-26 T 14-10-2018 Amir_1930 3a8f67ade61e529bb4641161cbc621ab 500 Gene3D G3DSA:2.60.40.1180 8 491 1.2E-204 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_1930 3a8f67ade61e529bb4641161cbc621ab 500 SUPERFAMILY SSF51445 18 380 1.57E-103 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1930 3a8f67ade61e529bb4641161cbc621ab 500 SMART SM00813 291 486 9.2E-56 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 Amir_5326 f073df5a3ff123460530938c6ad91701 654 Gene3D G3DSA:3.40.50.300 356 619 1.3E-83 T 14-10-2018 Amir_5326 f073df5a3ff123460530938c6ad91701 654 ProSitePatterns PS00211 ABC transporters family signature. 518 532 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_5326 f073df5a3ff123460530938c6ad91701 654 SUPERFAMILY SSF90123 30 350 5.89E-68 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_5326 f073df5a3ff123460530938c6ad91701 654 SUPERFAMILY SSF52540 356 617 2.09E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5326 f073df5a3ff123460530938c6ad91701 654 Gene3D G3DSA:1.20.1560.10 9 347 1.6E-73 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_5326 f073df5a3ff123460530938c6ad91701 654 Pfam PF00005 ABC transporter 398 546 1.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5326 f073df5a3ff123460530938c6ad91701 654 Pfam PF00664 ABC transporter transmembrane region 46 314 1.7E-38 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_5326 f073df5a3ff123460530938c6ad91701 654 SMART SM00382 406 598 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4471 082100c5d23e814fb80c1aaaf248df40 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 6 71 2.3E-10 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Amir_4471 082100c5d23e814fb80c1aaaf248df40 98 SUPERFAMILY SSF54909 2 91 8.05E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_4471 082100c5d23e814fb80c1aaaf248df40 98 Gene3D G3DSA:3.30.70.100 1 97 6.0E-16 T 14-10-2018 Amir_4127 f5e42b52d08c34cc9cfe7c158abfd33e 885 Gene3D G3DSA:3.40.50.300 686 882 2.1E-40 T 14-10-2018 Amir_4127 f5e42b52d08c34cc9cfe7c158abfd33e 885 SUPERFAMILY SSF52540 449 655 6.92E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4127 f5e42b52d08c34cc9cfe7c158abfd33e 885 SMART SM00487 452 641 7.5E-23 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_4127 f5e42b52d08c34cc9cfe7c158abfd33e 885 SUPERFAMILY SSF52540 566 846 2.66E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4127 f5e42b52d08c34cc9cfe7c158abfd33e 885 Gene3D G3DSA:3.40.50.10810 433 667 1.6E-45 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Amir_4127 f5e42b52d08c34cc9cfe7c158abfd33e 885 SMART SM00490 731 812 2.5E-8 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_4127 f5e42b52d08c34cc9cfe7c158abfd33e 885 Pfam PF00176 SNF2 family N-terminal domain 475 679 3.0E-30 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Amir_4127 f5e42b52d08c34cc9cfe7c158abfd33e 885 Pfam PF00271 Helicase conserved C-terminal domain 702 812 8.7E-12 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_0894 e8543e18c296bcf3fe93edb1457860d1 311 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 6 309 9.4E-114 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 Amir_0894 e8543e18c296bcf3fe93edb1457860d1 311 Gene3D G3DSA:3.40.50.1820 1 311 1.5E-101 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0894 e8543e18c296bcf3fe93edb1457860d1 311 PIRSF PIRSF006431 1 311 1.5E-129 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 Amir_0894 e8543e18c296bcf3fe93edb1457860d1 311 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 34 42 3.6E-14 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Amir_0894 e8543e18c296bcf3fe93edb1457860d1 311 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 60 71 3.6E-14 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Amir_0894 e8543e18c296bcf3fe93edb1457860d1 311 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 107 121 3.6E-14 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Amir_0894 e8543e18c296bcf3fe93edb1457860d1 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 121 134 8.3E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_0894 e8543e18c296bcf3fe93edb1457860d1 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 8.3E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_0894 e8543e18c296bcf3fe93edb1457860d1 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 8.3E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_0894 e8543e18c296bcf3fe93edb1457860d1 311 SUPERFAMILY SSF53474 2 293 5.59E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0894 e8543e18c296bcf3fe93edb1457860d1 311 Pfam PF00561 alpha/beta hydrolase fold 32 292 7.2E-31 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_5355 cab59ac97c3275a7b11191717b265799 313 SMART SM00422 12 86 5.8E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_5355 cab59ac97c3275a7b11191717b265799 313 Gene3D G3DSA:1.10.1660.10 23 193 9.8E-18 T 14-10-2018 Amir_5355 cab59ac97c3275a7b11191717b265799 313 SUPERFAMILY SSF46955 23 89 2.56E-13 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_5355 cab59ac97c3275a7b11191717b265799 313 Pfam PF00376 MerR family regulatory protein 15 54 1.1E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_5072 a6895c22cd351e37b155f0f54eac4350 451 SMART SM00633 83 348 1.1E-121 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_5072 a6895c22cd351e37b155f0f54eac4350 451 SUPERFAMILY SSF49384 353 445 6.77E-24 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_5072 a6895c22cd351e37b155f0f54eac4350 451 Gene3D G3DSA:2.60.40.290 352 451 3.2E-25 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_5072 a6895c22cd351e37b155f0f54eac4350 451 PRINTS PR00134 Glycosyl hydrolase family 10 signature 200 211 7.5E-19 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_5072 a6895c22cd351e37b155f0f54eac4350 451 PRINTS PR00134 Glycosyl hydrolase family 10 signature 114 126 7.5E-19 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_5072 a6895c22cd351e37b155f0f54eac4350 451 PRINTS PR00134 Glycosyl hydrolase family 10 signature 229 241 7.5E-19 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_5072 a6895c22cd351e37b155f0f54eac4350 451 PRINTS PR00134 Glycosyl hydrolase family 10 signature 156 167 7.5E-19 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_5072 a6895c22cd351e37b155f0f54eac4350 451 Pfam PF00331 Glycosyl hydrolase family 10 41 346 5.2E-107 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_5072 a6895c22cd351e37b155f0f54eac4350 451 Gene3D G3DSA:3.20.20.80 38 351 1.3E-117 T 14-10-2018 Amir_5072 a6895c22cd351e37b155f0f54eac4350 451 Pfam PF00553 Cellulose binding domain 356 445 5.0E-21 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_5072 a6895c22cd351e37b155f0f54eac4350 451 SUPERFAMILY SSF51445 37 348 3.55E-113 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_5072 a6895c22cd351e37b155f0f54eac4350 451 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 262 272 - T 14-10-2018 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_5072 a6895c22cd351e37b155f0f54eac4350 451 SMART SM00637 356 448 6.5E-31 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_6679 40a48fe459ee814efbcf62006f152ff6 483 SUPERFAMILY SSF56762 92 483 2.49E-120 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6679 40a48fe459ee814efbcf62006f152ff6 483 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 197 483 1.2E-107 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6679 40a48fe459ee814efbcf62006f152ff6 483 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 119 130 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6679 40a48fe459ee814efbcf62006f152ff6 483 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 74 483 47.158 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6679 40a48fe459ee814efbcf62006f152ff6 483 Gene3D G3DSA:1.10.645.20 81 483 2.3E-161 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6679 40a48fe459ee814efbcf62006f152ff6 483 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 82 483 6.4E-166 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_2788 702960496175b9fba03e2fbd3173e00f 169 Pfam PF04545 Sigma-70, region 4 112 161 3.2E-10 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amir_2788 702960496175b9fba03e2fbd3173e00f 169 SUPERFAMILY SSF88659 97 163 2.62E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_2788 702960496175b9fba03e2fbd3173e00f 169 Gene3D G3DSA:1.10.10.10 105 165 8.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0802 c1a2b99a5b2839e733725ad280e718b9 416 SMART SM00924 177 280 1.4E-31 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Amir_0802 c1a2b99a5b2839e733725ad280e718b9 416 SMART SM00116 356 404 0.0022 T 14-10-2018 IPR000644 CBS domain Amir_0802 c1a2b99a5b2839e733725ad280e718b9 416 SUPERFAMILY SSF158791 165 275 1.24E-28 T 14-10-2018 Amir_0802 c1a2b99a5b2839e733725ad280e718b9 416 SUPERFAMILY SSF50346 10 86 8.16E-10 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Amir_0802 c1a2b99a5b2839e733725ad280e718b9 416 Pfam PF00571 CBS domain 352 404 2.4E-5 T 14-10-2018 IPR000644 CBS domain Amir_0802 c1a2b99a5b2839e733725ad280e718b9 416 Gene3D G3DSA:3.10.580.10 277 405 9.4E-27 T 14-10-2018 Amir_0802 c1a2b99a5b2839e733725ad280e718b9 416 SUPERFAMILY SSF54631 279 410 1.26E-24 T 14-10-2018 Amir_0802 c1a2b99a5b2839e733725ad280e718b9 416 Pfam PF03448 MgtE intracellular N domain 177 276 8.3E-25 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Amir_0802 c1a2b99a5b2839e733725ad280e718b9 416 Gene3D G3DSA:1.25.60.10 159 275 1.5E-25 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily Amir_1840 fe18cf034e9cd45ef140a6a2accfdd56 615 Pfam PF00245 Alkaline phosphatase 39 385 6.2E-55 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Amir_1840 fe18cf034e9cd45ef140a6a2accfdd56 615 SMART SM00098 39 460 1.9E-13 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Amir_1840 fe18cf034e9cd45ef140a6a2accfdd56 615 PRINTS PR00113 Alkaline phosphatase signature 206 216 9.9E-18 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Amir_1840 fe18cf034e9cd45ef140a6a2accfdd56 615 PRINTS PR00113 Alkaline phosphatase signature 38 58 9.9E-18 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Amir_1840 fe18cf034e9cd45ef140a6a2accfdd56 615 PRINTS PR00113 Alkaline phosphatase signature 303 332 9.9E-18 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Amir_1840 fe18cf034e9cd45ef140a6a2accfdd56 615 SUPERFAMILY SSF53649 20 460 3.14E-87 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Amir_1840 fe18cf034e9cd45ef140a6a2accfdd56 615 Gene3D G3DSA:3.40.720.10 24 458 1.9E-102 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Amir_1471 3cdda6056ce4f5065e05f47acb4c60b9 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 43 89 3.9E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1471 3cdda6056ce4f5065e05f47acb4c60b9 257 Gene3D G3DSA:3.40.1410.10 93 257 2.8E-46 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Amir_1471 3cdda6056ce4f5065e05f47acb4c60b9 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 63 3.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1471 3cdda6056ce4f5065e05f47acb4c60b9 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 63 79 3.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1471 3cdda6056ce4f5065e05f47acb4c60b9 257 SMART SM00345 32 89 2.4E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1471 3cdda6056ce4f5065e05f47acb4c60b9 257 Pfam PF07702 UTRA domain 109 248 8.5E-35 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Amir_1471 3cdda6056ce4f5065e05f47acb4c60b9 257 SUPERFAMILY SSF64288 77 253 4.08E-46 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Amir_1471 3cdda6056ce4f5065e05f47acb4c60b9 257 Gene3D G3DSA:1.10.10.10 26 92 1.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1471 3cdda6056ce4f5065e05f47acb4c60b9 257 SMART SM00866 109 249 3.0E-34 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Amir_1471 3cdda6056ce4f5065e05f47acb4c60b9 257 SUPERFAMILY SSF46785 24 99 1.22E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4187 3cee8c665ff2814845bf60114cb0bb47 312 Pfam PF00106 short chain dehydrogenase 17 215 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4187 3cee8c665ff2814845bf60114cb0bb47 312 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 162 190 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_4187 3cee8c665ff2814845bf60114cb0bb47 312 SUPERFAMILY SSF51735 12 260 5.79E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4187 3cee8c665ff2814845bf60114cb0bb47 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 9.0E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4187 3cee8c665ff2814845bf60114cb0bb47 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 9.0E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4187 3cee8c665ff2814845bf60114cb0bb47 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 215 9.0E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4187 3cee8c665ff2814845bf60114cb0bb47 312 Gene3D G3DSA:3.40.50.720 6 311 1.7E-64 T 14-10-2018 Amir_3754 d760d219a67764d168adb0925a8c6bb2 613 Pfam PF00664 ABC transporter transmembrane region 40 321 8.3E-58 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_3754 d760d219a67764d168adb0925a8c6bb2 613 SUPERFAMILY SSF90123 22 352 3.14E-86 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_3754 d760d219a67764d168adb0925a8c6bb2 613 Gene3D G3DSA:1.20.1560.10 13 354 1.6E-99 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_3754 d760d219a67764d168adb0925a8c6bb2 613 SMART SM00382 392 578 3.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3754 d760d219a67764d168adb0925a8c6bb2 613 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3754 d760d219a67764d168adb0925a8c6bb2 613 Gene3D G3DSA:3.40.50.300 363 612 2.4E-90 T 14-10-2018 Amir_3754 d760d219a67764d168adb0925a8c6bb2 613 SUPERFAMILY SSF52540 361 603 1.66E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3754 d760d219a67764d168adb0925a8c6bb2 613 Pfam PF00005 ABC transporter 384 532 7.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3944 5e74929a4bd769a94eed97b0b5559d26 466 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 49 137 4.2E-24 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3944 5e74929a4bd769a94eed97b0b5559d26 466 Gene3D G3DSA:2.115.10.20 154 453 3.0E-78 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3944 5e74929a4bd769a94eed97b0b5559d26 466 Gene3D G3DSA:2.80.10.50 13 151 2.2E-40 T 14-10-2018 Amir_3944 5e74929a4bd769a94eed97b0b5559d26 466 SUPERFAMILY SSF75005 159 462 3.71E-57 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3944 5e74929a4bd769a94eed97b0b5559d26 466 SUPERFAMILY SSF50370 12 150 3.2E-44 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_3944 5e74929a4bd769a94eed97b0b5559d26 466 Pfam PF04616 Glycosyl hydrolases family 43 160 445 2.6E-53 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Amir_3944 5e74929a4bd769a94eed97b0b5559d26 466 SMART SM00458 13 150 1.4E-6 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_1233 a9bc115213197d362c563cfbb94100b7 262 SMART SM00382 46 228 2.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1233 a9bc115213197d362c563cfbb94100b7 262 Gene3D G3DSA:3.40.50.300 16 257 3.0E-58 T 14-10-2018 Amir_1233 a9bc115213197d362c563cfbb94100b7 262 SUPERFAMILY SSF52540 18 243 2.9E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1233 a9bc115213197d362c563cfbb94100b7 262 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_1233 a9bc115213197d362c563cfbb94100b7 262 Pfam PF00005 ABC transporter 37 178 9.6E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1549 4126edacec98369964c1a004649f0317 238 SUPERFAMILY SSF46894 171 237 7.48E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_1549 4126edacec98369964c1a004649f0317 238 Pfam PF00196 Bacterial regulatory proteins, luxR family 177 231 2.1E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1549 4126edacec98369964c1a004649f0317 238 SMART SM00448 31 143 5.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1549 4126edacec98369964c1a004649f0317 238 Gene3D G3DSA:3.40.50.12740 32 237 5.6E-50 T 14-10-2018 Amir_1549 4126edacec98369964c1a004649f0317 238 SUPERFAMILY SSF52172 32 152 1.01E-24 T 14-10-2018 IPR011006 CheY-like superfamily Amir_1549 4126edacec98369964c1a004649f0317 238 Pfam PF00072 Response regulator receiver domain 33 136 1.1E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1549 4126edacec98369964c1a004649f0317 238 SMART SM00421 174 231 6.1E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1549 4126edacec98369964c1a004649f0317 238 ProSitePatterns PS00622 LuxR-type HTH domain signature. 191 218 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1549 4126edacec98369964c1a004649f0317 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 219 1.8E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1549 4126edacec98369964c1a004649f0317 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 191 1.8E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1549 4126edacec98369964c1a004649f0317 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 207 1.8E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5195 ad72f1f6abd220ac7c270fa1205d2cc6 98 Hamap MF_01483 RNA polymerase-binding protein RbpA [rbpA]. 1 97 25.107 T 14-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 Amir_5195 ad72f1f6abd220ac7c270fa1205d2cc6 98 Gene3D G3DSA:2.20.28.270 13 58 5.4E-11 T 14-10-2018 IPR038638 RbpA superfamily Amir_5195 ad72f1f6abd220ac7c270fa1205d2cc6 98 ProSitePatterns PS00202 Rubredoxin signature. 35 45 - T 14-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 Amir_5195 ad72f1f6abd220ac7c270fa1205d2cc6 98 Pfam PF13397 RNA polymerase-binding protein 1 92 3.5E-36 T 14-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 Amir_6224 1f605b759ffdab68b3e0e25b2d14687b 283 Pfam PF13365 Trypsin-like peptidase domain 107 247 2.6E-33 T 14-10-2018 Amir_6224 1f605b759ffdab68b3e0e25b2d14687b 283 Gene3D G3DSA:2.40.10.10 75 167 1.3E-27 T 14-10-2018 Amir_6224 1f605b759ffdab68b3e0e25b2d14687b 283 PRINTS PR00834 HtrA/DegQ protease family signature 116 128 8.9E-41 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_6224 1f605b759ffdab68b3e0e25b2d14687b 283 PRINTS PR00834 HtrA/DegQ protease family signature 178 202 8.9E-41 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_6224 1f605b759ffdab68b3e0e25b2d14687b 283 PRINTS PR00834 HtrA/DegQ protease family signature 240 257 8.9E-41 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_6224 1f605b759ffdab68b3e0e25b2d14687b 283 PRINTS PR00834 HtrA/DegQ protease family signature 137 157 8.9E-41 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_6224 1f605b759ffdab68b3e0e25b2d14687b 283 PRINTS PR00834 HtrA/DegQ protease family signature 218 235 8.9E-41 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_6224 1f605b759ffdab68b3e0e25b2d14687b 283 Gene3D G3DSA:2.40.10.10 168 283 1.7E-41 T 14-10-2018 Amir_6224 1f605b759ffdab68b3e0e25b2d14687b 283 SUPERFAMILY SSF50494 81 281 6.26E-58 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_3738 d49f83ab22ef4951aadc5bab3b2e52f6 121 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 8 109 9.7E-22 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Amir_3738 d49f83ab22ef4951aadc5bab3b2e52f6 121 SUPERFAMILY SSF52091 9 114 3.34E-19 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3738 d49f83ab22ef4951aadc5bab3b2e52f6 121 Pfam PF01740 STAS domain 9 110 4.3E-15 T 14-10-2018 IPR002645 STAS domain Amir_3738 d49f83ab22ef4951aadc5bab3b2e52f6 121 Gene3D G3DSA:3.30.750.24 3 120 1.0E-25 T 14-10-2018 IPR036513 STAS domain superfamily Amir_1248 33a5348dcfe08df9522565eecc17ec69 263 Gene3D G3DSA:3.40.630.30 1 121 2.2E-17 T 14-10-2018 Amir_1248 33a5348dcfe08df9522565eecc17ec69 263 SUPERFAMILY SSF55729 4 210 9.22E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_1248 33a5348dcfe08df9522565eecc17ec69 263 Pfam PF13673 Acetyltransferase (GNAT) domain 41 120 3.0E-11 T 14-10-2018 IPR000182 GNAT domain Amir_0096 60b03c509535d86dc81ffd202e2a6f73 372 SMART SM00387 283 372 7.7E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0096 60b03c509535d86dc81ffd202e2a6f73 372 Gene3D G3DSA:3.30.450.40 25 176 2.1E-21 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_0096 60b03c509535d86dc81ffd202e2a6f73 372 Gene3D G3DSA:3.30.565.10 244 371 3.1E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0096 60b03c509535d86dc81ffd202e2a6f73 372 SMART SM00065 25 169 1.2E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_0096 60b03c509535d86dc81ffd202e2a6f73 372 SUPERFAMILY SSF55874 248 371 5.11E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0096 60b03c509535d86dc81ffd202e2a6f73 372 SUPERFAMILY SSF55781 25 167 1.2E-17 T 14-10-2018 Amir_0096 60b03c509535d86dc81ffd202e2a6f73 372 Pfam PF13185 GAF domain 25 159 5.3E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_0096 60b03c509535d86dc81ffd202e2a6f73 372 Pfam PF07730 Histidine kinase 176 238 4.2E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_0096 60b03c509535d86dc81ffd202e2a6f73 372 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 287 333 1.0E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_3605 93ec9bdf31cd097f12cded87d74381e7 163 SUPERFAMILY SSF55399 68 163 2.62E-15 T 14-10-2018 IPR036819 Subtilisin inhibitor-like superfamily GO:0004867 Amir_3605 93ec9bdf31cd097f12cded87d74381e7 163 Gene3D G3DSA:3.30.350.10 63 163 8.1E-23 T 14-10-2018 IPR036819 Subtilisin inhibitor-like superfamily GO:0004867 Amir_3605 93ec9bdf31cd097f12cded87d74381e7 163 Pfam PF00720 Subtilisin inhibitor-like 74 147 8.1E-13 T 14-10-2018 IPR023549 Subtilisin inhibitor GO:0004867 Amir_3605 93ec9bdf31cd097f12cded87d74381e7 163 ProDom PD004028 INHIBITOR PROTEASE SERINE DIRECT SEQUENCING SUBTILISIN PRECURSOR SIGNAL INHIBITOR-LIKE INHIBITOR 70 153 5.0E-8 T 14-10-2018 IPR023549 Subtilisin inhibitor GO:0004867 Amir_0678 ec0f4a102685c967ac6dbf423d7b8501 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 307 4.6E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0678 ec0f4a102685c967ac6dbf423d7b8501 307 Gene3D G3DSA:1.10.3720.10 91 303 1.7E-20 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0678 ec0f4a102685c967ac6dbf423d7b8501 307 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 60 6.2E-6 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Amir_0678 ec0f4a102685c967ac6dbf423d7b8501 307 SUPERFAMILY SSF161098 95 288 8.11E-22 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0191 b20e1d1458e1236cc9ba4e50b3ba0dee 404 TIGRFAM TIGR04188 methyltr_grsp: methyltransferase, ATP-grasp peptide maturase system 16 376 3.6E-131 T 14-10-2018 IPR026448 Methyltransferase, ATP-grasp peptide maturase system Amir_0191 b20e1d1458e1236cc9ba4e50b3ba0dee 404 SUPERFAMILY SSF53335 8 217 1.52E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_0191 b20e1d1458e1236cc9ba4e50b3ba0dee 404 Gene3D G3DSA:3.40.50.150 9 248 5.2E-54 T 14-10-2018 Amir_0191 b20e1d1458e1236cc9ba4e50b3ba0dee 404 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 89 228 1.8E-28 T 14-10-2018 Amir_0191 b20e1d1458e1236cc9ba4e50b3ba0dee 404 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 170 185 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Amir_5114 530873a60596ca79c038bd2d1ca160aa 708 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 6 703 0.0 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 Amir_5114 530873a60596ca79c038bd2d1ca160aa 708 Gene3D G3DSA:3.20.20.80 138 582 7.1E-185 T 14-10-2018 Amir_5114 530873a60596ca79c038bd2d1ca160aa 708 Gene3D G3DSA:2.60.40.10 1 136 9.9E-43 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_5114 530873a60596ca79c038bd2d1ca160aa 708 SUPERFAMILY SSF51445 135 576 3.0E-134 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_5114 530873a60596ca79c038bd2d1ca160aa 708 Gene3D G3DSA:2.60.40.1180 589 704 1.6E-21 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_5114 530873a60596ca79c038bd2d1ca160aa 708 Pfam PF00128 Alpha amylase, catalytic domain 311 531 1.7E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_5114 530873a60596ca79c038bd2d1ca160aa 708 Pfam PF00128 Alpha amylase, catalytic domain 188 277 2.0E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_5114 530873a60596ca79c038bd2d1ca160aa 708 SUPERFAMILY SSF51011 590 703 5.4E-27 T 14-10-2018 Amir_5114 530873a60596ca79c038bd2d1ca160aa 708 SMART SM00642 132 568 6.1E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_5114 530873a60596ca79c038bd2d1ca160aa 708 SUPERFAMILY SSF81296 5 147 3.92E-42 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_5114 530873a60596ca79c038bd2d1ca160aa 708 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 96 2.9E-16 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Amir_0881 278228516f1e45de1940aa4b575b9296 391 SMART SM00855 192 346 3.5E-18 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_0881 278228516f1e45de1940aa4b575b9296 391 Gene3D G3DSA:3.40.50.1240 191 391 1.1E-58 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_0881 278228516f1e45de1940aa4b575b9296 391 Gene3D G3DSA:3.30.420.10 1 135 1.7E-42 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amir_0881 278228516f1e45de1940aa4b575b9296 391 Pfam PF13456 Reverse transcriptase-like 7 129 1.1E-26 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Amir_0881 278228516f1e45de1940aa4b575b9296 391 SUPERFAMILY SSF53254 190 390 7.2E-54 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_0881 278228516f1e45de1940aa4b575b9296 391 SUPERFAMILY SSF53098 3 127 5.82E-32 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_0881 278228516f1e45de1940aa4b575b9296 391 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 193 385 1.2E-59 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_0881 278228516f1e45de1940aa4b575b9296 391 PIRSF PIRSF036922 1 391 1.8E-175 T 14-10-2018 IPR014636 RNase H, phosphoglycerate mutase domain-containing Amir_0312 542464d3956dc9e6791686947441ed16 564 SUPERFAMILY SSF53850 107 352 1.85E-9 T 14-10-2018 Amir_0312 542464d3956dc9e6791686947441ed16 564 SUPERFAMILY SSF53300 361 543 4.45E-20 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_0312 542464d3956dc9e6791686947441ed16 564 Pfam PF13531 Bacterial extracellular solute-binding protein 49 311 3.8E-34 T 14-10-2018 Amir_0312 542464d3956dc9e6791686947441ed16 564 SMART SM00327 357 560 6.0E-11 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_0312 542464d3956dc9e6791686947441ed16 564 Gene3D G3DSA:3.40.50.410 359 558 7.5E-32 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_0312 542464d3956dc9e6791686947441ed16 564 Pfam PF00092 von Willebrand factor type A domain 362 545 3.2E-8 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_1944 7c7c8309c32ee8511f42ca0be202d439 279 Pfam PF13560 Helix-turn-helix domain 9 71 1.1E-13 T 14-10-2018 Amir_1944 7c7c8309c32ee8511f42ca0be202d439 279 SMART SM00530 13 68 4.5E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_1944 7c7c8309c32ee8511f42ca0be202d439 279 SUPERFAMILY SSF47413 7 68 2.17E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1944 7c7c8309c32ee8511f42ca0be202d439 279 Gene3D G3DSA:1.10.260.40 5 81 4.6E-14 T 14-10-2018 Amir_4880 a7bdbb2a9dc7aef707229a97a6238c87 117 PRINTS PR00502 NUDIX hydrolase family signature 13 27 2.0E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_4880 a7bdbb2a9dc7aef707229a97a6238c87 117 PRINTS PR00502 NUDIX hydrolase family signature 27 42 2.0E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_4880 a7bdbb2a9dc7aef707229a97a6238c87 117 SUPERFAMILY SSF55811 11 96 7.18E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_4880 a7bdbb2a9dc7aef707229a97a6238c87 117 ProSitePatterns PS00893 Nudix box signature. 18 39 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_4880 a7bdbb2a9dc7aef707229a97a6238c87 117 Pfam PF00293 NUDIX domain 4 107 9.4E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_4880 a7bdbb2a9dc7aef707229a97a6238c87 117 Gene3D G3DSA:3.90.79.10 1 112 3.2E-22 T 14-10-2018 Amir_3750 2f6086aabd1b92bfcc0ca424875b699d 319 SUPERFAMILY SSF75005 16 318 2.43E-72 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3750 2f6086aabd1b92bfcc0ca424875b699d 319 Gene3D G3DSA:2.115.10.20 24 318 5.0E-85 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3750 2f6086aabd1b92bfcc0ca424875b699d 319 PIRSF PIRSF026534 2 319 1.0E-101 T 14-10-2018 IPR016840 Glycoside hydrolase, family 43, endo-1, 5-alpha-L-arabinosidase GO:0046558 Amir_3750 2f6086aabd1b92bfcc0ca424875b699d 319 Pfam PF04616 Glycosyl hydrolases family 43 40 316 1.8E-50 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Amir_4857 70ff12b62d38d64e68d22297e880e87c 419 SUPERFAMILY SSF53901 11 258 2.74E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4857 70ff12b62d38d64e68d22297e880e87c 419 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 375 1.7E-35 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_4857 70ff12b62d38d64e68d22297e880e87c 419 SMART SM00825 Beta-ketoacyl synthase 13 419 2.7E-12 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_4857 70ff12b62d38d64e68d22297e880e87c 419 PIRSF PIRSF000447 9 419 2.8E-140 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Amir_4857 70ff12b62d38d64e68d22297e880e87c 419 SUPERFAMILY SSF53901 220 417 3.35E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4857 70ff12b62d38d64e68d22297e880e87c 419 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 11 253 3.5E-46 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_4857 70ff12b62d38d64e68d22297e880e87c 419 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 11 414 1.1E-150 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Amir_4857 70ff12b62d38d64e68d22297e880e87c 419 Gene3D G3DSA:3.40.47.10 263 406 1.2E-49 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4857 70ff12b62d38d64e68d22297e880e87c 419 Gene3D G3DSA:3.40.47.10 3 262 1.2E-72 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_4857 70ff12b62d38d64e68d22297e880e87c 419 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 161 177 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_3282 99e74110ba347d36725d9f2d88dc78f5 363 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 10 118 1.1E-16 T 14-10-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC Amir_3282 99e74110ba347d36725d9f2d88dc78f5 363 Gene3D G3DSA:3.40.50.1000 8 153 5.6E-35 T 14-10-2018 IPR023214 HAD superfamily Amir_3282 99e74110ba347d36725d9f2d88dc78f5 363 SUPERFAMILY SSF56784 8 113 1.76E-16 T 14-10-2018 IPR036412 HAD-like superfamily Amir_3282 99e74110ba347d36725d9f2d88dc78f5 363 Gene3D G3DSA:3.40.630.30 184 324 5.0E-6 T 14-10-2018 Amir_3282 99e74110ba347d36725d9f2d88dc78f5 363 TIGRFAM TIGR01686 FkbH: FkbH domain 7 315 5.9E-105 T 14-10-2018 IPR010037 FkbH domain Amir_3282 99e74110ba347d36725d9f2d88dc78f5 363 SUPERFAMILY SSF55729 186 316 4.5E-6 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_1830 9ad079b33526da87e47be3ba3678b3bd 543 SUPERFAMILY SSF49265 340 443 1.8E-14 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 Amir_1830 9ad079b33526da87e47be3ba3678b3bd 543 SUPERFAMILY SSF51445 37 332 4.59E-72 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1830 9ad079b33526da87e47be3ba3678b3bd 543 SMART SM00637 440 540 1.1E-38 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_1830 9ad079b33526da87e47be3ba3678b3bd 543 Gene3D G3DSA:3.20.20.80 24 334 2.0E-81 T 14-10-2018 Amir_1830 9ad079b33526da87e47be3ba3678b3bd 543 Gene3D G3DSA:2.60.40.290 435 543 3.5E-33 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_1830 9ad079b33526da87e47be3ba3678b3bd 543 Gene3D G3DSA:2.60.40.10 341 431 6.7E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_1830 9ad079b33526da87e47be3ba3678b3bd 543 Pfam PF00041 Fibronectin type III domain 345 419 1.4E-6 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 Amir_1830 9ad079b33526da87e47be3ba3678b3bd 543 SUPERFAMILY SSF49384 438 540 6.63E-30 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_1830 9ad079b33526da87e47be3ba3678b3bd 543 Pfam PF00553 Cellulose binding domain 440 540 3.1E-27 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_1830 9ad079b33526da87e47be3ba3678b3bd 543 SMART SM00060 343 420 1.0E-6 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 Amir_1830 9ad079b33526da87e47be3ba3678b3bd 543 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 46 292 2.1E-31 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 Amir_6405 9c687b2676f8a6c4f05069315484a356 225 Pfam PF00072 Response regulator receiver domain 5 119 1.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6405 9c687b2676f8a6c4f05069315484a356 225 Gene3D G3DSA:3.40.50.12740 3 218 2.7E-67 T 14-10-2018 Amir_6405 9c687b2676f8a6c4f05069315484a356 225 SUPERFAMILY SSF52172 3 127 6.69E-33 T 14-10-2018 IPR011006 CheY-like superfamily Amir_6405 9c687b2676f8a6c4f05069315484a356 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 3.7E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6405 9c687b2676f8a6c4f05069315484a356 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 3.7E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6405 9c687b2676f8a6c4f05069315484a356 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 3.7E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6405 9c687b2676f8a6c4f05069315484a356 225 SUPERFAMILY SSF46894 139 219 2.28E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_6405 9c687b2676f8a6c4f05069315484a356 225 SMART SM00421 155 212 5.6E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6405 9c687b2676f8a6c4f05069315484a356 225 SMART SM00448 3 118 3.5E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6405 9c687b2676f8a6c4f05069315484a356 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 212 9.1E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4109 c6027c0ed5b495dc49ff5efef45d8621 174 Pfam PF01613 Flavin reductase like domain 22 171 2.2E-40 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amir_4109 c6027c0ed5b495dc49ff5efef45d8621 174 SUPERFAMILY SSF50475 18 172 5.89E-50 T 14-10-2018 Amir_4109 c6027c0ed5b495dc49ff5efef45d8621 174 SMART SM00903 22 170 2.0E-62 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amir_4109 c6027c0ed5b495dc49ff5efef45d8621 174 Gene3D G3DSA:2.30.110.10 8 173 9.1E-57 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_1062 6a3710887486bd5c98b9fae7801ed917 477 SUPERFAMILY SSF52794 2 98 4.01E-30 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Amir_1062 6a3710887486bd5c98b9fae7801ed917 477 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 131 467 2.0E-104 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 Amir_1062 6a3710887486bd5c98b9fae7801ed917 477 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 88 7.0E-19 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Amir_1062 6a3710887486bd5c98b9fae7801ed917 477 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 86 7.5E-29 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 Amir_1062 6a3710887486bd5c98b9fae7801ed917 477 Pfam PF02378 Phosphotransferase system, EIIC 138 413 2.3E-9 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Amir_1062 6a3710887486bd5c98b9fae7801ed917 477 Gene3D G3DSA:3.40.50.2300 1 104 2.3E-34 T 14-10-2018 Amir_2706 23e5f1e7e8acccc8e9d74beb21ae0ac0 356 SUPERFAMILY SSF53807 67 349 3.81E-44 T 14-10-2018 Amir_2706 23e5f1e7e8acccc8e9d74beb21ae0ac0 356 Gene3D G3DSA:3.40.50.1980 47 163 7.5E-35 T 14-10-2018 Amir_2706 23e5f1e7e8acccc8e9d74beb21ae0ac0 356 Pfam PF01497 Periplasmic binding protein 72 328 2.4E-36 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Amir_2706 23e5f1e7e8acccc8e9d74beb21ae0ac0 356 Gene3D G3DSA:3.40.50.1980 175 353 4.1E-54 T 14-10-2018 Amir_2842 dc56e9c3d9a2f6f0cb8e6a9f81228f79 492 SMART SM00421 408 465 1.9E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2842 dc56e9c3d9a2f6f0cb8e6a9f81228f79 492 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 441 453 7.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2842 dc56e9c3d9a2f6f0cb8e6a9f81228f79 492 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 411 425 7.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2842 dc56e9c3d9a2f6f0cb8e6a9f81228f79 492 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 425 441 7.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2842 dc56e9c3d9a2f6f0cb8e6a9f81228f79 492 Gene3D G3DSA:1.10.10.10 400 475 1.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2842 dc56e9c3d9a2f6f0cb8e6a9f81228f79 492 ProSitePatterns PS00622 LuxR-type HTH domain signature. 425 452 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2842 dc56e9c3d9a2f6f0cb8e6a9f81228f79 492 SUPERFAMILY SSF46894 399 471 9.86E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_2842 dc56e9c3d9a2f6f0cb8e6a9f81228f79 492 Gene3D G3DSA:3.30.565.10 280 397 3.6E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2842 dc56e9c3d9a2f6f0cb8e6a9f81228f79 492 Pfam PF00196 Bacterial regulatory proteins, luxR family 411 465 9.8E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0269 c0372cc679c29a62ea662fb741ae8423 304 Gene3D G3DSA:1.10.10.10 4 87 3.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0269 c0372cc679c29a62ea662fb741ae8423 304 Pfam PF01418 Helix-turn-helix domain, rpiR family 11 82 3.6E-19 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Amir_0269 c0372cc679c29a62ea662fb741ae8423 304 Pfam PF01380 SIS domain 137 264 2.2E-23 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Amir_0269 c0372cc679c29a62ea662fb741ae8423 304 SUPERFAMILY SSF46689 11 82 1.77E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0269 c0372cc679c29a62ea662fb741ae8423 304 Gene3D G3DSA:3.40.50.10490 104 287 1.2E-46 T 14-10-2018 Amir_0269 c0372cc679c29a62ea662fb741ae8423 304 SUPERFAMILY SSF53697 108 286 2.67E-42 T 14-10-2018 Amir_1129 1980f9baa6c94200ec1240d29ab96484 1651 SUPERFAMILY SSF53223 792 989 2.3E-23 T 14-10-2018 Amir_1129 1980f9baa6c94200ec1240d29ab96484 1651 PIRSF PIRSF036761 16 1651 0.0 T 14-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 Amir_1129 1980f9baa6c94200ec1240d29ab96484 1651 SUPERFAMILY SSF51735 978 1246 2.17E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1129 1980f9baa6c94200ec1240d29ab96484 1651 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 89 1647 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 Amir_4750 98ae8e9acbed66c040964fc93d48066a 214 Pfam PF00583 Acetyltransferase (GNAT) family 30 140 1.2E-9 T 14-10-2018 IPR000182 GNAT domain Amir_4750 98ae8e9acbed66c040964fc93d48066a 214 Gene3D G3DSA:3.40.630.30 18 152 2.7E-21 T 14-10-2018 Amir_4750 98ae8e9acbed66c040964fc93d48066a 214 SUPERFAMILY SSF55729 20 160 3.9E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_6640 282687670c516b3ea1809b43edf94b36 144 Pfam PF03946 Ribosomal protein L11, N-terminal domain 12 69 9.0E-29 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal Amir_6640 282687670c516b3ea1809b43edf94b36 144 ProSitePatterns PS00359 Ribosomal protein L11 signature. 129 144 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6640 282687670c516b3ea1809b43edf94b36 144 Pfam PF00298 Ribosomal protein L11, RNA binding domain 74 142 2.1E-25 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Amir_6640 282687670c516b3ea1809b43edf94b36 144 SMART SM00649 12 143 4.4E-85 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Amir_6640 282687670c516b3ea1809b43edf94b36 144 Gene3D G3DSA:1.10.10.250 76 143 1.9E-30 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Amir_6640 282687670c516b3ea1809b43edf94b36 144 Gene3D G3DSA:3.30.1550.10 5 75 1.4E-33 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Amir_6640 282687670c516b3ea1809b43edf94b36 144 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 6 143 3.3E-62 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6640 282687670c516b3ea1809b43edf94b36 144 SUPERFAMILY SSF54747 5 75 2.49E-29 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Amir_6640 282687670c516b3ea1809b43edf94b36 144 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 8 144 32.046 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Amir_6640 282687670c516b3ea1809b43edf94b36 144 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 39 76 6.0E-15 T 14-10-2018 Amir_6640 282687670c516b3ea1809b43edf94b36 144 SUPERFAMILY SSF46906 70 143 9.55E-27 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Amir_6801 87637f7095d6884ef203796c1863dbf8 275 SUPERFAMILY SSF53850 5 258 3.03E-51 T 14-10-2018 Amir_6801 87637f7095d6884ef203796c1863dbf8 275 Gene3D G3DSA:3.40.190.10 35 253 1.0E-58 T 14-10-2018 Amir_6801 87637f7095d6884ef203796c1863dbf8 275 SMART SM00062 38 262 3.7E-56 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_6801 87637f7095d6884ef203796c1863dbf8 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 260 4.2E-47 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_6801 87637f7095d6884ef203796c1863dbf8 275 Gene3D G3DSA:3.40.190.10 128 220 1.0E-58 T 14-10-2018 Amir_3369 c636a83ca9b8be2fdcfdd2f4543d71f0 363 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 174 191 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_3369 c636a83ca9b8be2fdcfdd2f4543d71f0 363 Pfam PF00871 Acetokinase family 48 354 5.9E-83 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_3369 c636a83ca9b8be2fdcfdd2f4543d71f0 363 SUPERFAMILY SSF53067 128 362 2.98E-63 T 14-10-2018 Amir_3369 c636a83ca9b8be2fdcfdd2f4543d71f0 363 SUPERFAMILY SSF53067 1 166 4.01E-44 T 14-10-2018 Amir_3369 c636a83ca9b8be2fdcfdd2f4543d71f0 363 Hamap MF_00020 Acetate kinase [ackA]. 1 363 117.987 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_3369 c636a83ca9b8be2fdcfdd2f4543d71f0 363 PRINTS PR00471 Acetate kinase family signature 344 356 4.4E-30 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_3369 c636a83ca9b8be2fdcfdd2f4543d71f0 363 PRINTS PR00471 Acetate kinase family signature 270 283 4.4E-30 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_3369 c636a83ca9b8be2fdcfdd2f4543d71f0 363 PRINTS PR00471 Acetate kinase family signature 144 157 4.4E-30 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_3369 c636a83ca9b8be2fdcfdd2f4543d71f0 363 PRINTS PR00471 Acetate kinase family signature 174 195 4.4E-30 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_3369 c636a83ca9b8be2fdcfdd2f4543d71f0 363 PRINTS PR00471 Acetate kinase family signature 292 308 4.4E-30 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_3369 c636a83ca9b8be2fdcfdd2f4543d71f0 363 PRINTS PR00471 Acetate kinase family signature 4 15 4.4E-30 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_3369 c636a83ca9b8be2fdcfdd2f4543d71f0 363 PIRSF PIRSF000722 1 43 0.093 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_3369 c636a83ca9b8be2fdcfdd2f4543d71f0 363 PIRSF PIRSF000722 37 363 4.6E-94 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_3369 c636a83ca9b8be2fdcfdd2f4543d71f0 363 Gene3D G3DSA:3.30.420.40 167 363 8.8E-57 T 14-10-2018 Amir_3369 c636a83ca9b8be2fdcfdd2f4543d71f0 363 Gene3D G3DSA:3.30.420.40 1 166 1.8E-46 T 14-10-2018 Amir_4877 03b17e69c9f725fce51b24afb1ac7733 856 SUPERFAMILY SSF52540 287 478 2.58E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4877 03b17e69c9f725fce51b24afb1ac7733 856 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 306 380 1.3E-4 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amir_4877 03b17e69c9f725fce51b24afb1ac7733 856 Gene3D G3DSA:3.40.50.300 288 414 1.1E-6 T 14-10-2018 Amir_4877 03b17e69c9f725fce51b24afb1ac7733 856 Gene3D G3DSA:3.30.70.1230 21 157 4.8E-5 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_4877 03b17e69c9f725fce51b24afb1ac7733 856 SMART SM00382 302 425 2.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6760 09c2857526134b5abf0d87416d1608b1 331 Gene3D G3DSA:2.40.10.10 207 304 1.3E-10 T 14-10-2018 Amir_6760 09c2857526134b5abf0d87416d1608b1 331 SUPERFAMILY SSF50494 133 311 1.65E-14 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_6760 09c2857526134b5abf0d87416d1608b1 331 Gene3D G3DSA:2.40.10.10 203 313 1.3E-10 T 14-10-2018 Amir_5952 fe5bf2fb217fe2a68df0f15a825a5bc9 1194 Gene3D G3DSA:3.40.50.300 4 268 1.8E-56 T 14-10-2018 Amir_5952 fe5bf2fb217fe2a68df0f15a825a5bc9 1194 Gene3D G3DSA:1.20.1060.20 510 656 2.2E-20 T 14-10-2018 Amir_5952 fe5bf2fb217fe2a68df0f15a825a5bc9 1194 PIRSF PIRSF005719 4 1194 8.8E-251 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein Amir_5952 fe5bf2fb217fe2a68df0f15a825a5bc9 1194 Gene3D G3DSA:3.30.70.1620 573 652 2.2E-20 T 14-10-2018 Amir_5952 fe5bf2fb217fe2a68df0f15a825a5bc9 1194 SUPERFAMILY SSF52540 5 1182 9.15E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5952 fe5bf2fb217fe2a68df0f15a825a5bc9 1194 Pfam PF06470 SMC proteins Flexible Hinge Domain 513 624 1.8E-17 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 Amir_5952 fe5bf2fb217fe2a68df0f15a825a5bc9 1194 SUPERFAMILY SSF75553 468 669 9.02E-26 T 14-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 Amir_5952 fe5bf2fb217fe2a68df0f15a825a5bc9 1194 Hamap MF_01894 Chromosome partition protein Smc [smc]. 4 1190 22.133 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Amir_5952 fe5bf2fb217fe2a68df0f15a825a5bc9 1194 SMART SM00968 513 625 6.4E-18 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 Amir_5952 fe5bf2fb217fe2a68df0f15a825a5bc9 1194 Pfam PF02463 RecF/RecN/SMC N terminal domain 6 1181 6.5E-71 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Amir_5952 fe5bf2fb217fe2a68df0f15a825a5bc9 1194 Gene3D G3DSA:3.40.50.300 1036 1193 1.3E-42 T 14-10-2018 Amir_5952 fe5bf2fb217fe2a68df0f15a825a5bc9 1194 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 6 1188 9.1E-288 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Amir_3019 3d8839833a2d90e8dc6309fa2b15aa8a 207 Gene3D G3DSA:1.10.357.10 16 207 8.7E-26 T 14-10-2018 Amir_3019 3d8839833a2d90e8dc6309fa2b15aa8a 207 SUPERFAMILY SSF46689 22 91 2.14E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3019 3d8839833a2d90e8dc6309fa2b15aa8a 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 32 78 1.7E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3943 7ac80e25729a327a04df920787d6b2ae 412 Gene3D G3DSA:1.20.1250.20 23 397 1.7E-12 T 14-10-2018 Amir_3943 7ac80e25729a327a04df920787d6b2ae 412 SUPERFAMILY SSF103473 16 395 2.35E-17 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2880 2891534809e5d9952a96f119b52811f6 366 Pfam PF06030 Bacterial protein of unknown function (DUF916) 43 142 1.3E-7 T 14-10-2018 IPR010317 Protein of unknown function DUF916, cell surface putative Amir_1695 b873ef334b151d94ec2e2b9f18bf49c0 632 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 606 41.17 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Amir_1695 b873ef334b151d94ec2e2b9f18bf49c0 632 Pfam PF02355 Protein export membrane protein 419 595 6.3E-11 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Amir_1695 b873ef334b151d94ec2e2b9f18bf49c0 632 Gene3D G3DSA:3.30.1360.200 311 411 3.0E-31 T 14-10-2018 Amir_1695 b873ef334b151d94ec2e2b9f18bf49c0 632 SUPERFAMILY SSF82866 397 597 5.89E-29 T 14-10-2018 Amir_1695 b873ef334b151d94ec2e2b9f18bf49c0 632 Gene3D G3DSA:3.30.70.3400 40 124 4.5E-16 T 14-10-2018 Amir_1695 b873ef334b151d94ec2e2b9f18bf49c0 632 Gene3D G3DSA:1.20.1640.10 412 604 9.4E-9 T 14-10-2018 Amir_1695 b873ef334b151d94ec2e2b9f18bf49c0 632 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 40 591 5.5E-118 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Amir_1695 b873ef334b151d94ec2e2b9f18bf49c0 632 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 350 583 1.6E-67 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amir_4509 7bb4af35a07ee452117b84214f71b344 723 Pfam PF03176 MMPL family 468 686 2.6E-35 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Amir_4509 7bb4af35a07ee452117b84214f71b344 723 Pfam PF03176 MMPL family 45 358 8.0E-68 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Amir_4509 7bb4af35a07ee452117b84214f71b344 723 Gene3D G3DSA:1.20.1640.10 496 684 8.0E-8 T 14-10-2018 Amir_4509 7bb4af35a07ee452117b84214f71b344 723 SUPERFAMILY SSF82866 467 686 3.92E-32 T 14-10-2018 Amir_4509 7bb4af35a07ee452117b84214f71b344 723 Gene3D G3DSA:1.20.1640.10 153 344 5.1E-7 T 14-10-2018 Amir_4509 7bb4af35a07ee452117b84214f71b344 723 SUPERFAMILY SSF82866 121 334 7.98E-28 T 14-10-2018 Amir_3379 40a537d319f6a82e240d6a45371e7370 415 SUPERFAMILY SSF103473 16 410 4.84E-35 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_3379 40a537d319f6a82e240d6a45371e7370 415 Pfam PF07690 Major Facilitator Superfamily 38 260 2.2E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_3379 40a537d319f6a82e240d6a45371e7370 415 Gene3D G3DSA:1.20.1250.20 19 409 8.7E-32 T 14-10-2018 Amir_1393 b0817195cda4826109ecf6d3a97ec3c0 170 SUPERFAMILY SSF53098 3 156 1.64E-5 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_1393 b0817195cda4826109ecf6d3a97ec3c0 170 Pfam PF16473 3' exoribonuclease, RNase T-like 1 158 7.7E-18 T 14-10-2018 IPR033390 3'-5' exoribonuclease Rv2179c-like domain Amir_1393 b0817195cda4826109ecf6d3a97ec3c0 170 Hamap MF_00977 3'-5' exoribonuclease. 1 162 42.446 T 14-10-2018 IPR030853 3-5 exoribonuclease, actinobacteria GO:0000287|GO:0008408 Amir_1393 b0817195cda4826109ecf6d3a97ec3c0 170 Gene3D G3DSA:3.30.420.10 1 170 1.3E-62 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amir_3265 27b2099e8868fea957d3d20ccb470867 153 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 38 142 3.1E-17 T 14-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family Amir_3265 27b2099e8868fea957d3d20ccb470867 153 Pfam PF05119 Phage terminase, small subunit 46 137 7.0E-20 T 14-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family Amir_6565 c2263178f2a906c946ff0a6f5abe5a01 147 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 Amir_6565 c2263178f2a906c946ff0a6f5abe5a01 147 PIRSF PIRSF002181 3 147 1.5E-48 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Amir_6565 c2263178f2a906c946ff0a6f5abe5a01 147 SUPERFAMILY SSF52161 4 143 5.36E-57 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Amir_6565 c2263178f2a906c946ff0a6f5abe5a01 147 Pfam PF00572 Ribosomal protein L13 15 138 3.5E-54 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Amir_6565 c2263178f2a906c946ff0a6f5abe5a01 147 Gene3D G3DSA:3.90.1180.10 1 142 1.2E-59 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Amir_6565 c2263178f2a906c946ff0a6f5abe5a01 147 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 143 27.727 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Amir_6565 c2263178f2a906c946ff0a6f5abe5a01 147 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 141 2.4E-60 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_2717 2f7b4e39b704c6da2cd4e349ddb39f25 353 SUPERFAMILY SSF51569 33 351 3.14E-98 T 14-10-2018 Amir_2717 2f7b4e39b704c6da2cd4e349ddb39f25 353 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 38 352 1.0E-106 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Amir_2717 2f7b4e39b704c6da2cd4e349ddb39f25 353 Gene3D G3DSA:3.20.20.70 19 353 1.5E-116 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_2717 2f7b4e39b704c6da2cd4e349ddb39f25 353 Pfam PF00793 DAHP synthetase I family 48 341 2.9E-68 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Amir_2717 2f7b4e39b704c6da2cd4e349ddb39f25 353 PIRSF PIRSF001361 28 353 3.6E-114 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Amir_5807 60c00e81daa86544a7587bea8701933b 298 Gene3D G3DSA:3.20.20.70 5 297 5.5E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5807 60c00e81daa86544a7587bea8701933b 298 SMART SM01130 12 295 1.0E-116 T 14-10-2018 IPR002220 DapA-like GO:0016829 Amir_5807 60c00e81daa86544a7587bea8701933b 298 Pfam PF00701 Dihydrodipicolinate synthetase family 13 294 7.7E-80 T 14-10-2018 IPR002220 DapA-like GO:0016829 Amir_5807 60c00e81daa86544a7587bea8701933b 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 139 156 3.9E-25 T 14-10-2018 IPR002220 DapA-like GO:0016829 Amir_5807 60c00e81daa86544a7587bea8701933b 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 114 130 3.9E-25 T 14-10-2018 IPR002220 DapA-like GO:0016829 Amir_5807 60c00e81daa86544a7587bea8701933b 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 46 67 3.9E-25 T 14-10-2018 IPR002220 DapA-like GO:0016829 Amir_5807 60c00e81daa86544a7587bea8701933b 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 82 100 3.9E-25 T 14-10-2018 IPR002220 DapA-like GO:0016829 Amir_5807 60c00e81daa86544a7587bea8701933b 298 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 144 174 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Amir_5807 60c00e81daa86544a7587bea8701933b 298 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 49 66 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_5807 60c00e81daa86544a7587bea8701933b 298 SUPERFAMILY SSF51569 12 294 1.26E-91 T 14-10-2018 Amir_5807 60c00e81daa86544a7587bea8701933b 298 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 16 292 2.9E-77 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_5807 60c00e81daa86544a7587bea8701933b 298 PIRSF PIRSF001365 10 298 1.0E-82 T 14-10-2018 IPR002220 DapA-like GO:0016829 Amir_5807 60c00e81daa86544a7587bea8701933b 298 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 12 296 55.016 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_5715 6e6ff0ac5f337e91eadc907d6ba8e12d 296 Pfam PF02779 Transketolase, pyrimidine binding domain 6 157 1.9E-20 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amir_5715 6e6ff0ac5f337e91eadc907d6ba8e12d 296 SUPERFAMILY SSF52518 4 164 5.4E-32 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_5715 6e6ff0ac5f337e91eadc907d6ba8e12d 296 Gene3D G3DSA:3.40.50.970 2 169 4.6E-36 T 14-10-2018 Amir_5715 6e6ff0ac5f337e91eadc907d6ba8e12d 296 SUPERFAMILY SSF52922 173 292 1.57E-11 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_5715 6e6ff0ac5f337e91eadc907d6ba8e12d 296 SMART SM00861 4 160 2.3E-25 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amir_5715 6e6ff0ac5f337e91eadc907d6ba8e12d 296 Gene3D G3DSA:3.40.50.920 172 295 3.3E-10 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_5496 b55f1cee06fd78bf89322640f6c1ec94 185 Gene3D G3DSA:1.20.58.500 46 139 2.7E-14 T 14-10-2018 Amir_5496 b55f1cee06fd78bf89322640f6c1ec94 185 SUPERFAMILY SSF140663 31 138 9.81E-29 T 14-10-2018 IPR023203 TTHA0068-like superfamily Amir_5496 b55f1cee06fd78bf89322640f6c1ec94 185 Pfam PF03745 Domain of unknown function (DUF309) 49 107 1.2E-21 T 14-10-2018 IPR005500 Protein of unknown function DUF309 Amir_4370 9eafa724f87bfa643a9c81da6f7fb8f1 601 Gene3D G3DSA:3.40.50.12780 8 349 2.3E-53 T 14-10-2018 Amir_4370 9eafa724f87bfa643a9c81da6f7fb8f1 601 SUPERFAMILY SSF56801 14 600 5.89E-107 T 14-10-2018 Amir_4370 9eafa724f87bfa643a9c81da6f7fb8f1 601 Pfam PF00501 AMP-binding enzyme 22 472 5.0E-81 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4370 9eafa724f87bfa643a9c81da6f7fb8f1 601 Gene3D G3DSA:3.40.50.12780 350 465 5.6E-28 T 14-10-2018 Amir_4370 9eafa724f87bfa643a9c81da6f7fb8f1 601 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4370 9eafa724f87bfa643a9c81da6f7fb8f1 601 Gene3D G3DSA:3.30.300.30 468 597 5.6E-6 T 14-10-2018 Amir_1497 f1e6aa5a5ad23f6dbc5cbe53ef34d71c 106 Pfam PF11298 Protein of unknown function (DUF3099) 9 77 1.9E-31 T 14-10-2018 IPR021449 Protein of unknown function DUF3099 Amir_4124 11ce7142068a09f129b16a2589981f24 671 Gene3D G3DSA:3.30.365.10 309 397 1.5E-37 T 14-10-2018 Amir_4124 11ce7142068a09f129b16a2589981f24 671 Gene3D G3DSA:3.90.1170.50 163 268 4.4E-11 T 14-10-2018 Amir_4124 11ce7142068a09f129b16a2589981f24 671 Gene3D G3DSA:3.30.365.10 526 670 5.3E-28 T 14-10-2018 Amir_4124 11ce7142068a09f129b16a2589981f24 671 SUPERFAMILY SSF56003 298 667 1.51E-81 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Amir_4124 11ce7142068a09f129b16a2589981f24 671 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 30 155 4.7E-15 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Amir_4124 11ce7142068a09f129b16a2589981f24 671 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 299 507 4.7E-14 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Amir_4124 11ce7142068a09f129b16a2589981f24 671 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 539 621 1.5E-10 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Amir_4124 11ce7142068a09f129b16a2589981f24 671 Gene3D G3DSA:3.30.365.10 299 503 1.5E-37 T 14-10-2018 Amir_4124 11ce7142068a09f129b16a2589981f24 671 SUPERFAMILY SSF56003 5 222 6.28E-35 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Amir_4124 11ce7142068a09f129b16a2589981f24 671 Gene3D G3DSA:3.30.365.10 28 162 3.3E-22 T 14-10-2018 Amir_4124 11ce7142068a09f129b16a2589981f24 671 SMART SM01008 188 272 1.2E-11 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Amir_0506 e75a98f83bdf4e674853bee8c82b88a3 565 Gene3D G3DSA:3.20.20.140 135 565 3.7E-283 T 14-10-2018 Amir_0506 e75a98f83bdf4e674853bee8c82b88a3 565 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 3.7E-33 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0506 e75a98f83bdf4e674853bee8c82b88a3 565 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 3.7E-33 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0506 e75a98f83bdf4e674853bee8c82b88a3 565 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 340 356 3.7E-33 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0506 e75a98f83bdf4e674853bee8c82b88a3 565 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 301 318 3.7E-33 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0506 e75a98f83bdf4e674853bee8c82b88a3 565 Pfam PF01979 Amidohydrolase family 131 453 1.2E-67 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_0506 e75a98f83bdf4e674853bee8c82b88a3 565 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 565 9.2E-262 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0506 e75a98f83bdf4e674853bee8c82b88a3 565 SUPERFAMILY SSF51338 424 477 4.75E-5 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_0506 e75a98f83bdf4e674853bee8c82b88a3 565 Gene3D G3DSA:2.30.40.10 4 480 3.7E-283 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_0506 e75a98f83bdf4e674853bee8c82b88a3 565 Hamap MF_01953 Urease subunit alpha [ureC]. 2 565 54.184 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0506 e75a98f83bdf4e674853bee8c82b88a3 565 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 124 4.3E-51 T 14-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0506 e75a98f83bdf4e674853bee8c82b88a3 565 SUPERFAMILY SSF51338 3 181 1.22E-56 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_0506 e75a98f83bdf4e674853bee8c82b88a3 565 SUPERFAMILY SSF51556 135 565 2.21E-181 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_0506 e75a98f83bdf4e674853bee8c82b88a3 565 ProSitePatterns PS00145 Urease active site. 323 339 - T 14-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0506 e75a98f83bdf4e674853bee8c82b88a3 565 ProSitePatterns PS01120 Urease nickel ligands signature. 133 146 - T 14-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_2555 11b76f0c4fb35cf2804bb1319891b2d1 718 Gene3D G3DSA:3.30.70.270 293 464 1.1E-44 T 14-10-2018 Amir_2555 11b76f0c4fb35cf2804bb1319891b2d1 718 SUPERFAMILY SSF141868 474 705 5.36E-78 T 14-10-2018 IPR035919 EAL domain superfamily Amir_2555 11b76f0c4fb35cf2804bb1319891b2d1 718 SMART SM00052 467 711 1.6E-94 T 14-10-2018 IPR001633 EAL domain Amir_2555 11b76f0c4fb35cf2804bb1319891b2d1 718 Pfam PF00563 EAL domain 474 705 1.1E-67 T 14-10-2018 IPR001633 EAL domain Amir_2555 11b76f0c4fb35cf2804bb1319891b2d1 718 Gene3D G3DSA:3.20.20.450 470 714 7.8E-88 T 14-10-2018 IPR035919 EAL domain superfamily Amir_2555 11b76f0c4fb35cf2804bb1319891b2d1 718 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 297 454 7.8E-30 T 14-10-2018 IPR000160 GGDEF domain Amir_2555 11b76f0c4fb35cf2804bb1319891b2d1 718 SUPERFAMILY SSF55073 305 457 5.57E-37 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_2555 11b76f0c4fb35cf2804bb1319891b2d1 718 Pfam PF00990 Diguanylate cyclase, GGDEF domain 302 451 2.7E-34 T 14-10-2018 IPR000160 GGDEF domain Amir_2555 11b76f0c4fb35cf2804bb1319891b2d1 718 SMART SM00267 289 457 1.7E-49 T 14-10-2018 IPR000160 GGDEF domain Amir_3183 06a8bf973cc026a2d5f009c2127e23d6 511 Pfam PF01494 FAD binding domain 5 343 2.2E-71 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_3183 06a8bf973cc026a2d5f009c2127e23d6 511 SUPERFAMILY SSF51905 6 376 4.07E-61 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3183 06a8bf973cc026a2d5f009c2127e23d6 511 Gene3D G3DSA:3.30.70.2450 182 269 5.7E-98 T 14-10-2018 Amir_3183 06a8bf973cc026a2d5f009c2127e23d6 511 Gene3D G3DSA:3.40.30.120 404 504 6.9E-13 T 14-10-2018 Amir_3183 06a8bf973cc026a2d5f009c2127e23d6 511 Gene3D G3DSA:3.50.50.60 7 345 5.7E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3183 06a8bf973cc026a2d5f009c2127e23d6 511 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 3.2E-41 T 14-10-2018 Amir_3183 06a8bf973cc026a2d5f009c2127e23d6 511 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 3.2E-41 T 14-10-2018 Amir_3183 06a8bf973cc026a2d5f009c2127e23d6 511 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 331 347 3.2E-41 T 14-10-2018 Amir_3183 06a8bf973cc026a2d5f009c2127e23d6 511 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 313 331 3.2E-41 T 14-10-2018 Amir_3183 06a8bf973cc026a2d5f009c2127e23d6 511 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.2E-41 T 14-10-2018 Amir_3183 06a8bf973cc026a2d5f009c2127e23d6 511 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 3.2E-41 T 14-10-2018 Amir_2265 f2db13b10ec49bec3edbb95786f3a574 708 Pfam PF10592 AIPR protein 248 499 7.0E-41 T 14-10-2018 IPR018891 Abortive bacteriophage infection, resistance Amir_7002 cc7bfb97132c415b85adea99ee7c9480 288 SMART SM00530 16 71 1.8E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_7002 cc7bfb97132c415b85adea99ee7c9480 288 SUPERFAMILY SSF47413 9 68 4.79E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_7002 cc7bfb97132c415b85adea99ee7c9480 288 Gene3D G3DSA:1.10.260.40 4 73 2.9E-7 T 14-10-2018 Amir_7002 cc7bfb97132c415b85adea99ee7c9480 288 Pfam PF13560 Helix-turn-helix domain 12 72 8.7E-11 T 14-10-2018 Amir_5105 134bb79c2ef1fc26447d0512f733e987 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 4.5E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5105 134bb79c2ef1fc26447d0512f733e987 197 SUPERFAMILY SSF48498 88 189 8.67E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_5105 134bb79c2ef1fc26447d0512f733e987 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.7E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5105 134bb79c2ef1fc26447d0512f733e987 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.7E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5105 134bb79c2ef1fc26447d0512f733e987 197 Gene3D G3DSA:1.10.357.10 3 192 1.1E-36 T 14-10-2018 Amir_5105 134bb79c2ef1fc26447d0512f733e987 197 SUPERFAMILY SSF46689 4 73 1.1E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5105 134bb79c2ef1fc26447d0512f733e987 197 Pfam PF13305 WHG domain 100 168 7.1E-7 T 14-10-2018 IPR025996 WHG domain Amir_4771 2af020b0e605d881bd4b38c666495bda 287 TIGRFAM TIGR03770 anch_rpt_perm: anchored repeat-type ABC transporter, permease subunit 13 269 6.1E-114 T 14-10-2018 IPR022392 Anchored repeat-type ABC transporter, permease subunit Amir_4771 2af020b0e605d881bd4b38c666495bda 287 Pfam PF00950 ABC 3 transport family 13 268 6.1E-70 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Amir_4771 2af020b0e605d881bd4b38c666495bda 287 SUPERFAMILY SSF81345 7 264 1.09E-40 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_4771 2af020b0e605d881bd4b38c666495bda 287 Gene3D G3DSA:1.10.3470.10 38 273 1.1E-5 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_1383 b3a17af3d1073609afab6222456d9632 602 Pfam PF00501 AMP-binding enzyme 23 470 2.3E-95 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_1383 b3a17af3d1073609afab6222456d9632 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_1383 b3a17af3d1073609afab6222456d9632 602 SUPERFAMILY SSF56801 16 600 3.66E-118 T 14-10-2018 Amir_1383 b3a17af3d1073609afab6222456d9632 602 Gene3D G3DSA:3.40.50.12780 4 325 9.0E-56 T 14-10-2018 Amir_1383 b3a17af3d1073609afab6222456d9632 602 Gene3D G3DSA:3.40.50.12780 326 468 1.1E-38 T 14-10-2018 Amir_0317 edd2894923c6b25ffbfe558d0eb729c5 158 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 129 4.2E-37 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Amir_0317 edd2894923c6b25ffbfe558d0eb729c5 158 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 2.4E-31 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Amir_0317 edd2894923c6b25ffbfe558d0eb729c5 158 SUPERFAMILY SSF55083 3 148 8.37E-46 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Amir_0317 edd2894923c6b25ffbfe558d0eb729c5 158 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 84 95 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Amir_0317 edd2894923c6b25ffbfe558d0eb729c5 158 Gene3D G3DSA:3.30.70.560 1 154 2.5E-45 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Amir_1990 46448e54ed6d84415be95674f8547049 243 PIRSF PIRSF000706 1 243 3.6E-50 T 14-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 Amir_1990 46448e54ed6d84415be95674f8547049 243 Gene3D G3DSA:3.90.1200.10 68 243 1.3E-45 T 14-10-2018 Amir_1990 46448e54ed6d84415be95674f8547049 243 Gene3D G3DSA:3.30.200.20 1 67 2.9E-10 T 14-10-2018 Amir_1990 46448e54ed6d84415be95674f8547049 243 Pfam PF01636 Phosphotransferase enzyme family 16 220 4.5E-21 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_1990 46448e54ed6d84415be95674f8547049 243 SUPERFAMILY SSF56112 26 243 1.33E-30 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_3190 283689a3e06e1a1816562ca7d34601d9 919 Pfam PF00486 Transcriptional regulatory protein, C terminal 23 82 1.6E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_3190 283689a3e06e1a1816562ca7d34601d9 919 SUPERFAMILY SSF48452 96 264 1.52E-38 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3190 283689a3e06e1a1816562ca7d34601d9 919 SUPERFAMILY SSF46894 2 94 4.54E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_3190 283689a3e06e1a1816562ca7d34601d9 919 Gene3D G3DSA:1.10.10.10 1 97 3.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3190 283689a3e06e1a1816562ca7d34601d9 919 SMART SM01043 101 246 2.1E-49 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_3190 283689a3e06e1a1816562ca7d34601d9 919 Gene3D G3DSA:1.25.40.10 99 270 2.5E-50 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3190 283689a3e06e1a1816562ca7d34601d9 919 Pfam PF13191 AAA ATPase domain 500 680 4.4E-18 T 14-10-2018 Amir_3190 283689a3e06e1a1816562ca7d34601d9 919 SMART SM00862 15 94 6.2E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_3190 283689a3e06e1a1816562ca7d34601d9 919 SUPERFAMILY SSF55073 331 473 4.08E-11 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_3190 283689a3e06e1a1816562ca7d34601d9 919 Gene3D G3DSA:3.30.70.1230 322 481 2.4E-8 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_3190 283689a3e06e1a1816562ca7d34601d9 919 Pfam PF03704 Bacterial transcriptional activator domain 101 246 4.3E-49 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_3190 283689a3e06e1a1816562ca7d34601d9 919 SUPERFAMILY SSF52540 498 759 6.82E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 Gene3D G3DSA:3.40.50.300 35 245 8.6E-95 T 14-10-2018 Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 Gene3D G3DSA:3.40.50.620 253 390 6.6E-13 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 37 246 4.1E-94 T 14-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 759 896 1.6E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 SUPERFAMILY SSF55874 703 896 4.85E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 PRINTS PR00344 Bacterial sensor protein C-terminal signature 825 839 8.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 PRINTS PR00344 Bacterial sensor protein C-terminal signature 858 876 8.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 PRINTS PR00344 Bacterial sensor protein C-terminal signature 843 853 8.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 PRINTS PR00344 Bacterial sensor protein C-terminal signature 882 895 8.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 SUPERFAMILY SSF52402 267 393 6.28E-16 T 14-10-2018 Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 SUPERFAMILY SSF52540 43 173 3.29E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 SMART SM00387 755 898 4.6E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 SUPERFAMILY SSF47384 634 714 9.81E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 Gene3D G3DSA:1.10.287.130 637 712 5.4E-15 T 14-10-2018 Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 Pfam PF00582 Universal stress protein family 266 391 6.5E-11 T 14-10-2018 IPR006016 UspA Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 Gene3D G3DSA:1.20.120.620 413 517 1.2E-15 T 14-10-2018 IPR038318 KdpD, transmembrane domain superfamily Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 Pfam PF00512 His Kinase A (phospho-acceptor) domain 647 713 1.8E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 SMART SM00388 646 714 2.1E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_1955 66f47dddbbc9044af8c2c33620e26906 902 Pfam PF13493 Domain of unknown function (DUF4118) 417 523 4.9E-25 T 14-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain Amir_4128 a270510fd7636e2f849c3d79bfd7a40b 1131 SMART SM00490 511 596 2.4E-23 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_4128 a270510fd7636e2f849c3d79bfd7a40b 1131 Pfam PF00176 SNF2 family N-terminal domain 124 289 4.6E-11 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Amir_4128 a270510fd7636e2f849c3d79bfd7a40b 1131 Gene3D G3DSA:3.40.50.300 423 626 5.7E-41 T 14-10-2018 Amir_4128 a270510fd7636e2f849c3d79bfd7a40b 1131 SMART SM00487 99 298 7.4E-18 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_4128 a270510fd7636e2f849c3d79bfd7a40b 1131 SUPERFAMILY SSF52540 93 292 6.55E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4128 a270510fd7636e2f849c3d79bfd7a40b 1131 SUPERFAMILY SSF52540 221 637 2.0E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4128 a270510fd7636e2f849c3d79bfd7a40b 1131 Pfam PF13020 Domain of unknown function (DUF3883) 1007 1091 5.5E-12 T 14-10-2018 IPR024975 Domain of unknown function DUF3883 Amir_4128 a270510fd7636e2f849c3d79bfd7a40b 1131 Pfam PF00271 Helicase conserved C-terminal domain 494 596 4.8E-20 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_4128 a270510fd7636e2f849c3d79bfd7a40b 1131 Gene3D G3DSA:3.40.50.10810 100 384 2.7E-59 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Amir_2847 82d5e65102833453dfac87239de4787a 505 SUPERFAMILY SSF53187 25 411 3.14E-68 T 14-10-2018 Amir_2847 82d5e65102833453dfac87239de4787a 505 Gene3D G3DSA:3.40.630.10 32 396 8.4E-116 T 14-10-2018 Amir_2847 82d5e65102833453dfac87239de4787a 505 Pfam PF01546 Peptidase family M20/M25/M40 90 408 1.7E-24 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Amir_2847 82d5e65102833453dfac87239de4787a 505 SUPERFAMILY SSF55031 204 309 2.36E-26 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amir_2847 82d5e65102833453dfac87239de4787a 505 Pfam PF07687 Peptidase dimerisation domain 205 299 7.5E-11 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Amir_2847 82d5e65102833453dfac87239de4787a 505 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 32 394 2.0E-88 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Amir_2847 82d5e65102833453dfac87239de4787a 505 Gene3D G3DSA:3.30.70.360 200 314 8.4E-116 T 14-10-2018 Amir_0904 7a0336f7d6b419c51973957744dea940 287 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 26 286 40.459 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Amir_0904 7a0336f7d6b419c51973957744dea940 287 Pfam PF02548 Ketopantoate hydroxymethyltransferase 25 281 1.4E-104 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Amir_0904 7a0336f7d6b419c51973957744dea940 287 SUPERFAMILY SSF51621 25 285 1.37E-99 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Amir_0904 7a0336f7d6b419c51973957744dea940 287 PIRSF PIRSF000388 18 287 1.5E-105 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Amir_0904 7a0336f7d6b419c51973957744dea940 287 Gene3D G3DSA:3.20.20.60 23 286 6.4E-107 T 14-10-2018 Amir_0904 7a0336f7d6b419c51973957744dea940 287 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 25 287 8.2E-83 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Amir_5666 7cb0643198e5ffd763531c81f98ab9cd 381 SUPERFAMILY SSF47203 231 381 1.34E-49 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_5666 7cb0643198e5ffd763531c81f98ab9cd 381 SUPERFAMILY SSF56645 6 245 9.56E-84 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_5666 7cb0643198e5ffd763531c81f98ab9cd 381 Gene3D G3DSA:1.20.140.10 237 381 4.6E-47 T 14-10-2018 Amir_5666 7cb0643198e5ffd763531c81f98ab9cd 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 121 2.6E-33 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_5666 7cb0643198e5ffd763531c81f98ab9cd 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 221 2.4E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amir_5666 7cb0643198e5ffd763531c81f98ab9cd 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 127 139 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amir_5666 7cb0643198e5ffd763531c81f98ab9cd 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 381 7.7E-45 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_5666 7cb0643198e5ffd763531c81f98ab9cd 381 PIRSF PIRSF016578 1 381 3.9E-15 T 14-10-2018 Amir_5666 7cb0643198e5ffd763531c81f98ab9cd 381 Gene3D G3DSA:1.10.540.10 4 123 1.2E-35 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_5666 7cb0643198e5ffd763531c81f98ab9cd 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 340 359 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amir_5666 7cb0643198e5ffd763531c81f98ab9cd 381 Gene3D G3DSA:2.40.110.10 124 236 5.6E-41 T 14-10-2018 Amir_6585 bbb26562fcf5cff9849e9b25de87bbcf 135 SUPERFAMILY SSF53137 20 135 5.82E-49 T 14-10-2018 Amir_6585 bbb26562fcf5cff9849e9b25de87bbcf 135 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 4 135 34.118 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Amir_6585 bbb26562fcf5cff9849e9b25de87bbcf 135 ProSitePatterns PS00054 Ribosomal protein S11 signature. 103 125 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site Amir_6585 bbb26562fcf5cff9849e9b25de87bbcf 135 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 16 132 9.3E-59 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6585 bbb26562fcf5cff9849e9b25de87bbcf 135 Gene3D G3DSA:3.30.420.80 9 135 4.9E-54 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Amir_6585 bbb26562fcf5cff9849e9b25de87bbcf 135 PIRSF PIRSF002131 5 135 5.5E-53 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Amir_6585 bbb26562fcf5cff9849e9b25de87bbcf 135 Pfam PF00411 Ribosomal protein S11 25 134 3.3E-48 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Amir_6021 fcd48a5fe96054c7306fa02d8a1654de 611 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 35 598 5.4E-232 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Amir_6021 fcd48a5fe96054c7306fa02d8a1654de 611 SUPERFAMILY SSF52518 401 608 8.22E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_6021 fcd48a5fe96054c7306fa02d8a1654de 611 Gene3D G3DSA:3.40.50.970 395 603 1.9E-67 T 14-10-2018 Amir_6021 fcd48a5fe96054c7306fa02d8a1654de 611 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 224 359 2.6E-47 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Amir_6021 fcd48a5fe96054c7306fa02d8a1654de 611 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 459 478 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Amir_6021 fcd48a5fe96054c7306fa02d8a1654de 611 SUPERFAMILY SSF52467 217 390 1.85E-61 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amir_6021 fcd48a5fe96054c7306fa02d8a1654de 611 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 35 200 1.0E-55 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Amir_6021 fcd48a5fe96054c7306fa02d8a1654de 611 SUPERFAMILY SSF52518 31 215 8.97E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_6021 fcd48a5fe96054c7306fa02d8a1654de 611 Gene3D G3DSA:3.40.50.970 30 207 2.7E-69 T 14-10-2018 Amir_6021 fcd48a5fe96054c7306fa02d8a1654de 611 Gene3D G3DSA:3.40.50.1220 218 389 6.6E-62 T 14-10-2018 Amir_6021 fcd48a5fe96054c7306fa02d8a1654de 611 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 422 575 1.7E-50 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amir_6065 31da9ea927a30aec6042d55245901f52 259 SUPERFAMILY SSF52096 4 255 2.05E-81 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_6065 31da9ea927a30aec6042d55245901f52 259 Gene3D G3DSA:3.90.226.10 1 198 2.2E-72 T 14-10-2018 Amir_6065 31da9ea927a30aec6042d55245901f52 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 251 5.7E-66 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Amir_6065 31da9ea927a30aec6042d55245901f52 259 Gene3D G3DSA:1.10.12.10 199 259 4.4E-15 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Amir_7075 ae83b4fc3ccd0c23388ae28a2c635f97 176 Pfam PF13630 SdpI/YhfL protein family 70 136 8.9E-10 T 14-10-2018 IPR025962 SdpI/YhfL protein family Amir_3141 60a28c586f6987f43ab495653b73a18d 261 Pfam PF01791 DeoC/LacD family aldolase 38 225 2.7E-25 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Amir_3141 60a28c586f6987f43ab495653b73a18d 261 SUPERFAMILY SSF51569 11 244 3.66E-35 T 14-10-2018 Amir_3141 60a28c586f6987f43ab495653b73a18d 261 SMART SM01133 12 229 1.0E-10 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Amir_3141 60a28c586f6987f43ab495653b73a18d 261 PIRSF PIRSF038992 5 255 7.4E-47 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Amir_3141 60a28c586f6987f43ab495653b73a18d 261 Gene3D G3DSA:3.20.20.70 3 249 1.9E-50 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5808 fa8bc0b6fe6d088046d061696a5c215b 206 TIGRFAM TIGR03085 TIGR03085: TIGR03085 family protein 4 199 5.0E-68 T 14-10-2018 IPR017519 Conserved hypothetical protein CHP03085 Amir_5808 fa8bc0b6fe6d088046d061696a5c215b 206 SUPERFAMILY SSF109854 3 112 7.78E-7 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_5808 fa8bc0b6fe6d088046d061696a5c215b 206 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 4 182 7.1E-34 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type Amir_6933 5facd80a9481aaa54289e4d913298fa3 235 SUPERFAMILY SSF75217 86 227 4.19E-30 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Amir_6933 5facd80a9481aaa54289e4d913298fa3 235 SMART SM00967 6 84 0.008 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Amir_6933 5facd80a9481aaa54289e4d913298fa3 235 Pfam PF00588 SpoU rRNA Methylase family 95 224 3.0E-25 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Amir_6933 5facd80a9481aaa54289e4d913298fa3 235 Gene3D G3DSA:3.40.1280.10 89 233 8.0E-31 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Amir_4605 938ef5da20fa3c62ee0a498c3eb22715 469 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 410 419 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_4605 938ef5da20fa3c62ee0a498c3eb22715 469 Pfam PF00067 Cytochrome P450 51 444 7.3E-48 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4605 938ef5da20fa3c62ee0a498c3eb22715 469 PRINTS PR00465 E-class P450 group IV signature 401 417 9.7E-16 T 14-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4605 938ef5da20fa3c62ee0a498c3eb22715 469 PRINTS PR00465 E-class P450 group IV signature 417 435 9.7E-16 T 14-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4605 938ef5da20fa3c62ee0a498c3eb22715 469 PRINTS PR00465 E-class P450 group IV signature 71 94 9.7E-16 T 14-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4605 938ef5da20fa3c62ee0a498c3eb22715 469 PRINTS PR00465 E-class P450 group IV signature 378 396 9.7E-16 T 14-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4605 938ef5da20fa3c62ee0a498c3eb22715 469 PRINTS PR00465 E-class P450 group IV signature 329 345 9.7E-16 T 14-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4605 938ef5da20fa3c62ee0a498c3eb22715 469 SUPERFAMILY SSF48264 46 465 1.01E-82 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4605 938ef5da20fa3c62ee0a498c3eb22715 469 Gene3D G3DSA:1.10.630.10 42 469 8.3E-90 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1190 105e32bae2634230ed9a85fce5e1d66a 376 ProSitePatterns PS00902 Glutamate 5-kinase signature. 220 237 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Amir_1190 105e32bae2634230ed9a85fce5e1d66a 376 Hamap MF_00456 Glutamate 5-kinase [proB]. 18 269 35.196 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Amir_1190 105e32bae2634230ed9a85fce5e1d66a 376 SMART SM00359 287 366 1.6E-12 T 14-10-2018 IPR002478 PUA domain GO:0003723 Amir_1190 105e32bae2634230ed9a85fce5e1d66a 376 Gene3D G3DSA:3.40.1160.10 7 275 4.2E-79 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amir_1190 105e32bae2634230ed9a85fce5e1d66a 376 TIGRFAM TIGR01027 proB: glutamate 5-kinase 19 372 5.3E-126 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Amir_1190 105e32bae2634230ed9a85fce5e1d66a 376 PRINTS PR00474 Glutamate 5-kinase family signature 161 188 4.8E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amir_1190 105e32bae2634230ed9a85fce5e1d66a 376 PRINTS PR00474 Glutamate 5-kinase family signature 222 242 4.8E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amir_1190 105e32bae2634230ed9a85fce5e1d66a 376 PRINTS PR00474 Glutamate 5-kinase family signature 89 117 4.8E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amir_1190 105e32bae2634230ed9a85fce5e1d66a 376 PRINTS PR00474 Glutamate 5-kinase family signature 55 69 4.8E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amir_1190 105e32bae2634230ed9a85fce5e1d66a 376 PRINTS PR00474 Glutamate 5-kinase family signature 129 150 4.8E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amir_1190 105e32bae2634230ed9a85fce5e1d66a 376 SUPERFAMILY SSF53633 19 266 2.75E-57 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amir_1190 105e32bae2634230ed9a85fce5e1d66a 376 Pfam PF01472 PUA domain 287 354 2.2E-16 T 14-10-2018 IPR002478 PUA domain GO:0003723 Amir_1190 105e32bae2634230ed9a85fce5e1d66a 376 SUPERFAMILY SSF88697 287 372 5.97E-17 T 14-10-2018 IPR015947 PUA-like superfamily Amir_1190 105e32bae2634230ed9a85fce5e1d66a 376 Gene3D G3DSA:2.30.130.10 276 373 3.0E-24 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 Amir_1190 105e32bae2634230ed9a85fce5e1d66a 376 Pfam PF00696 Amino acid kinase family 19 246 9.1E-41 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Amir_1190 105e32bae2634230ed9a85fce5e1d66a 376 PIRSF PIRSF000729 13 375 1.5E-117 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Amir_6571 a94bad781597ce4273b3f5ac2bc94ebc 1333 Pfam PF01580 FtsK/SpoIIIE family 451 576 1.8E-21 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Amir_6571 a94bad781597ce4273b3f5ac2bc94ebc 1333 Pfam PF01580 FtsK/SpoIIIE family 811 1046 1.2E-56 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Amir_6571 a94bad781597ce4273b3f5ac2bc94ebc 1333 TIGRFAM TIGR03925 T7SS_EccC_b: type VII secretion protein EccCb 754 1328 6.9E-233 T 14-10-2018 IPR023837 EccCb-like, Actinobacteria Amir_6571 a94bad781597ce4273b3f5ac2bc94ebc 1333 SUPERFAMILY SSF52540 784 1020 2.75E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6571 a94bad781597ce4273b3f5ac2bc94ebc 1333 SUPERFAMILY SSF52540 441 699 3.8E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6571 a94bad781597ce4273b3f5ac2bc94ebc 1333 Gene3D G3DSA:3.40.50.300 205 363 3.1E-12 T 14-10-2018 Amir_6571 a94bad781597ce4273b3f5ac2bc94ebc 1333 Gene3D G3DSA:3.40.50.300 776 1083 7.8E-92 T 14-10-2018 Amir_6571 a94bad781597ce4273b3f5ac2bc94ebc 1333 Gene3D G3DSA:3.40.50.300 1092 1331 1.4E-51 T 14-10-2018 Amir_6571 a94bad781597ce4273b3f5ac2bc94ebc 1333 TIGRFAM TIGR03924 T7SS_EccC_a: type VII secretion protein EccCa 24 698 5.1E-280 T 14-10-2018 IPR023836 EccCa-like, Actinobacteria Amir_2466 8853a8ffc70ab82556b7cb201911d44d 120 SUPERFAMILY SSF52091 10 113 1.31E-16 T 14-10-2018 IPR036513 STAS domain superfamily Amir_2466 8853a8ffc70ab82556b7cb201911d44d 120 Pfam PF01740 STAS domain 12 100 6.3E-6 T 14-10-2018 IPR002645 STAS domain Amir_2466 8853a8ffc70ab82556b7cb201911d44d 120 Gene3D G3DSA:3.30.750.24 5 118 3.2E-21 T 14-10-2018 IPR036513 STAS domain superfamily Amir_4462 1e2b93a36afda287d877a9bd6b4f8f4c 277 Gene3D G3DSA:3.40.50.1820 1 273 3.4E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4462 1e2b93a36afda287d877a9bd6b4f8f4c 277 PRINTS PR00412 Epoxide hydrolase signature 249 271 4.7E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4462 1e2b93a36afda287d877a9bd6b4f8f4c 277 PRINTS PR00412 Epoxide hydrolase signature 105 118 4.7E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4462 1e2b93a36afda287d877a9bd6b4f8f4c 277 PRINTS PR00412 Epoxide hydrolase signature 28 46 4.7E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4462 1e2b93a36afda287d877a9bd6b4f8f4c 277 PRINTS PR00412 Epoxide hydrolase signature 48 63 4.7E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4462 1e2b93a36afda287d877a9bd6b4f8f4c 277 SUPERFAMILY SSF53474 3 272 3.36E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4462 1e2b93a36afda287d877a9bd6b4f8f4c 277 Pfam PF12697 Alpha/beta hydrolase family 24 266 6.7E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4528 a9fe15c5b0469088b6521cec3e0610b9 282 SUPERFAMILY SSF109854 12 161 5.19E-13 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_4528 a9fe15c5b0469088b6521cec3e0610b9 282 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 17 217 1.6E-16 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type Amir_4528 a9fe15c5b0469088b6521cec3e0610b9 282 Gene3D G3DSA:1.20.120.450 5 160 2.4E-6 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_4528 a9fe15c5b0469088b6521cec3e0610b9 282 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 17 157 3.1E-11 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 Amir_6410 b0cd37860bce179d04b3420c42942906 246 SUPERFAMILY SSF81338 7 243 1.7E-59 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Amir_6410 b0cd37860bce179d04b3420c42942906 246 Gene3D G3DSA:1.20.1080.10 4 245 2.0E-69 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Amir_6410 b0cd37860bce179d04b3420c42942906 246 ProSitePatterns PS00221 MIP family signature. 64 72 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 Amir_6410 b0cd37860bce179d04b3420c42942906 246 PRINTS PR00783 Major intrinsic protein family signature 177 199 2.4E-34 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Amir_6410 b0cd37860bce179d04b3420c42942906 246 PRINTS PR00783 Major intrinsic protein family signature 83 102 2.4E-34 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Amir_6410 b0cd37860bce179d04b3420c42942906 246 PRINTS PR00783 Major intrinsic protein family signature 46 70 2.4E-34 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Amir_6410 b0cd37860bce179d04b3420c42942906 246 PRINTS PR00783 Major intrinsic protein family signature 5 24 2.4E-34 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Amir_6410 b0cd37860bce179d04b3420c42942906 246 PRINTS PR00783 Major intrinsic protein family signature 224 244 2.4E-34 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Amir_6410 b0cd37860bce179d04b3420c42942906 246 PRINTS PR00783 Major intrinsic protein family signature 138 156 2.4E-34 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Amir_6410 b0cd37860bce179d04b3420c42942906 246 Pfam PF00230 Major intrinsic protein 7 241 4.1E-38 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Amir_2025 bece07ef0ba83a53c7212d69a4cebd26 418 SUPERFAMILY SSF53383 17 407 1.66E-67 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_2025 bece07ef0ba83a53c7212d69a4cebd26 418 Pfam PF00266 Aminotransferase class-V 94 335 1.6E-23 T 14-10-2018 IPR000192 Aminotransferase class V domain Amir_2025 bece07ef0ba83a53c7212d69a4cebd26 418 PIRSF PIRSF038800 9 413 1.2E-110 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 Amir_2025 bece07ef0ba83a53c7212d69a4cebd26 418 Gene3D G3DSA:3.90.1150.10 21 407 1.8E-117 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_2025 bece07ef0ba83a53c7212d69a4cebd26 418 Gene3D G3DSA:3.40.640.10 52 314 1.8E-117 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_0706 76d9a788000f923a99fc21b204bd50d0 173 Gene3D G3DSA:1.10.10.10 13 66 3.4E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0706 76d9a788000f923a99fc21b204bd50d0 173 SUPERFAMILY SSF46785 17 89 2.38E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0706 76d9a788000f923a99fc21b204bd50d0 173 Pfam PF01037 Lrp/AsnC ligand binding domain 92 153 3.7E-15 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Amir_0706 76d9a788000f923a99fc21b204bd50d0 173 SUPERFAMILY SSF54909 77 161 1.15E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_0706 76d9a788000f923a99fc21b204bd50d0 173 Pfam PF13404 AsnC-type helix-turn-helix domain 18 57 6.1E-7 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_0706 76d9a788000f923a99fc21b204bd50d0 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 44 2.6E-6 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_0706 76d9a788000f923a99fc21b204bd50d0 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 44 63 2.6E-6 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_0706 76d9a788000f923a99fc21b204bd50d0 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 33 2.6E-6 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_0706 76d9a788000f923a99fc21b204bd50d0 173 SMART SM00344 17 123 5.3E-15 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Amir_0706 76d9a788000f923a99fc21b204bd50d0 173 Gene3D G3DSA:3.30.70.920 70 157 3.2E-20 T 14-10-2018 Amir_3010 618a0472991afb0d32ad325594da8736 128 Gene3D G3DSA:3.10.450.50 1 123 4.4E-42 T 14-10-2018 Amir_3010 618a0472991afb0d32ad325594da8736 128 Pfam PF12680 SnoaL-like domain 4 96 3.2E-11 T 14-10-2018 IPR037401 SnoaL-like domain Amir_3010 618a0472991afb0d32ad325594da8736 128 SUPERFAMILY SSF54427 4 103 5.63E-23 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_3002 d6b600ce513dba91f0bd93c083b7e874 372 Gene3D G3DSA:3.30.420.10 93 258 9.7E-27 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amir_3002 d6b600ce513dba91f0bd93c083b7e874 372 SUPERFAMILY SSF53098 93 249 1.01E-24 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_3002 d6b600ce513dba91f0bd93c083b7e874 372 Pfam PF00929 Exonuclease 94 241 2.1E-11 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Amir_3002 d6b600ce513dba91f0bd93c083b7e874 372 SMART SM00479 92 254 1.8E-13 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Amir_2589 0366c8f5d8e0fa6d2842cb3f4b8363db 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 46 8.3E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2589 0366c8f5d8e0fa6d2842cb3f4b8363db 196 SUPERFAMILY SSF46689 3 52 9.23E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2589 0366c8f5d8e0fa6d2842cb3f4b8363db 196 Gene3D G3DSA:1.10.357.10 1 196 9.8E-42 T 14-10-2018 Amir_2589 0366c8f5d8e0fa6d2842cb3f4b8363db 196 SUPERFAMILY SSF48498 61 194 2.67E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_2589 0366c8f5d8e0fa6d2842cb3f4b8363db 196 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 59 132 8.8E-8 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 Amir_0986 dd97d018f950237f6293b452ab9daf63 206 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 16 196 1.8E-31 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal Amir_0986 dd97d018f950237f6293b452ab9daf63 206 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 206 70.659 T 14-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 Amir_0986 dd97d018f950237f6293b452ab9daf63 206 Gene3D G3DSA:3.40.225.10 12 205 4.9E-41 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Amir_0986 dd97d018f950237f6293b452ab9daf63 206 SUPERFAMILY SSF53639 15 200 1.69E-35 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Amir_0986 dd97d018f950237f6293b452ab9daf63 206 SMART SM01007 15 199 2.8E-36 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal Amir_0986 dd97d018f950237f6293b452ab9daf63 206 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 18 202 4.5E-47 T 14-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 Amir_3286 6f12c4f64a59fff7bb9155cc344a976a 165 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 165 47.274 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_3286 6f12c4f64a59fff7bb9155cc344a976a 165 SUPERFAMILY SSF52304 25 164 5.63E-47 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_3286 6f12c4f64a59fff7bb9155cc344a976a 165 Pfam PF01220 Dehydroquinase class II 26 160 6.8E-45 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_3286 6f12c4f64a59fff7bb9155cc344a976a 165 PIRSF PIRSF001399 23 165 8.6E-46 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_3286 6f12c4f64a59fff7bb9155cc344a976a 165 ProSitePatterns PS01029 Dehydroquinase class II signature. 29 46 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_3286 6f12c4f64a59fff7bb9155cc344a976a 165 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 27 142 2.0E-46 T 14-10-2018 Amir_3286 6f12c4f64a59fff7bb9155cc344a976a 165 Gene3D G3DSA:3.40.50.9100 19 165 3.1E-48 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amir_2714 3e9271a48a55d1ac186361fb4494c4a4 183 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 9.6E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2714 3e9271a48a55d1ac186361fb4494c4a4 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2714 3e9271a48a55d1ac186361fb4494c4a4 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 4.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2714 3e9271a48a55d1ac186361fb4494c4a4 183 SUPERFAMILY SSF46689 2 77 3.06E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2714 3e9271a48a55d1ac186361fb4494c4a4 183 Gene3D G3DSA:1.10.357.10 1 183 1.5E-47 T 14-10-2018 Amir_4403 af711336546776b8b1c89ae3da933eec 174 SUPERFAMILY SSF49777 14 169 2.62E-48 T 14-10-2018 IPR036610 PEBP-like superfamily Amir_4403 af711336546776b8b1c89ae3da933eec 174 Gene3D G3DSA:3.90.280.10 1 172 3.0E-54 T 14-10-2018 IPR036610 PEBP-like superfamily Amir_4403 af711336546776b8b1c89ae3da933eec 174 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 31 167 3.1E-35 T 14-10-2018 IPR005247 YbhB/YbcL Amir_4403 af711336546776b8b1c89ae3da933eec 174 Pfam PF01161 Phosphatidylethanolamine-binding protein 37 169 4.2E-37 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein Amir_2251 255b7bb519648486fadd6ff1dde812a4 114 Pfam PF02416 mttA/Hcf106 family 4 54 5.3E-18 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Amir_2251 255b7bb519648486fadd6ff1dde812a4 114 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 49 3.1E-17 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Amir_2251 255b7bb519648486fadd6ff1dde812a4 114 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 86 20.573 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Amir_6670 fafd696c990749d4e2d5ef7096b20e31 520 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 508 1.7E-169 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6670 fafd696c990749d4e2d5ef7096b20e31 520 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 167 191 2.8E-35 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6670 fafd696c990749d4e2d5ef7096b20e31 520 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 137 156 2.8E-35 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6670 fafd696c990749d4e2d5ef7096b20e31 520 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 244 268 2.8E-35 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6670 fafd696c990749d4e2d5ef7096b20e31 520 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 332 351 2.8E-35 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6670 fafd696c990749d4e2d5ef7096b20e31 520 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 384 410 2.8E-35 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6670 fafd696c990749d4e2d5ef7096b20e31 520 Pfam PF00361 Proton-conducting membrane transporter 131 425 4.1E-62 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_1617 95a853ee0755eddce9994110f422e2dd 214 SUPERFAMILY SSF52172 3 132 4.13E-29 T 14-10-2018 IPR011006 CheY-like superfamily Amir_1617 95a853ee0755eddce9994110f422e2dd 214 SUPERFAMILY SSF46894 142 211 1.63E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_1617 95a853ee0755eddce9994110f422e2dd 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 5.5E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1617 95a853ee0755eddce9994110f422e2dd 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 5.5E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1617 95a853ee0755eddce9994110f422e2dd 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 5.5E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1617 95a853ee0755eddce9994110f422e2dd 214 Gene3D G3DSA:3.40.50.12740 3 211 9.5E-59 T 14-10-2018 Amir_1617 95a853ee0755eddce9994110f422e2dd 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 205 1.6E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1617 95a853ee0755eddce9994110f422e2dd 214 SMART SM00421 150 207 6.4E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1617 95a853ee0755eddce9994110f422e2dd 214 Pfam PF00072 Response regulator receiver domain 6 116 5.1E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1617 95a853ee0755eddce9994110f422e2dd 214 SMART SM00448 3 116 3.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2608 f23dc8904bc4ccaf9eebc2c1edd446dc 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 252 8.0E-56 T 14-10-2018 Amir_2608 f23dc8904bc4ccaf9eebc2c1edd446dc 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2608 f23dc8904bc4ccaf9eebc2c1edd446dc 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2608 f23dc8904bc4ccaf9eebc2c1edd446dc 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2608 f23dc8904bc4ccaf9eebc2c1edd446dc 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_2608 f23dc8904bc4ccaf9eebc2c1edd446dc 254 Gene3D G3DSA:3.40.50.720 6 253 2.3E-71 T 14-10-2018 Amir_2608 f23dc8904bc4ccaf9eebc2c1edd446dc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2608 f23dc8904bc4ccaf9eebc2c1edd446dc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2608 f23dc8904bc4ccaf9eebc2c1edd446dc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 4.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2608 f23dc8904bc4ccaf9eebc2c1edd446dc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2608 f23dc8904bc4ccaf9eebc2c1edd446dc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2608 f23dc8904bc4ccaf9eebc2c1edd446dc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 4.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2608 f23dc8904bc4ccaf9eebc2c1edd446dc 254 SUPERFAMILY SSF51735 11 253 2.08E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2383 1a7d0225853f318f5bf6a3603c0c301d 152 Gene3D G3DSA:1.10.10.10 1 60 2.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2383 1a7d0225853f318f5bf6a3603c0c301d 152 SUPERFAMILY SSF46785 6 66 9.89E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2383 1a7d0225853f318f5bf6a3603c0c301d 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.5E-18 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_2383 1a7d0225853f318f5bf6a3603c0c301d 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.5E-18 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_2383 1a7d0225853f318f5bf6a3603c0c301d 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.5E-18 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_2383 1a7d0225853f318f5bf6a3603c0c301d 152 SMART SM00344 7 116 1.4E-37 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Amir_2383 1a7d0225853f318f5bf6a3603c0c301d 152 Gene3D G3DSA:3.30.70.920 61 143 2.6E-16 T 14-10-2018 Amir_2383 1a7d0225853f318f5bf6a3603c0c301d 152 Pfam PF01037 Lrp/AsnC ligand binding domain 75 142 6.0E-12 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Amir_2383 1a7d0225853f318f5bf6a3603c0c301d 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 1.5E-19 T 14-10-2018 Amir_2383 1a7d0225853f318f5bf6a3603c0c301d 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Amir_2383 1a7d0225853f318f5bf6a3603c0c301d 152 SUPERFAMILY SSF54909 71 151 1.18E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_1178 e839045c1ea04a4953582fc46cdfa740 1104 SMART SM00028 533 566 61.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_1178 e839045c1ea04a4953582fc46cdfa740 1104 SMART SM00028 981 1014 0.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_1178 e839045c1ea04a4953582fc46cdfa740 1104 Gene3D G3DSA:3.40.50.300 13 162 8.4E-6 T 14-10-2018 Amir_1178 e839045c1ea04a4953582fc46cdfa740 1104 SUPERFAMILY SSF48452 535 1011 9.62E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_1178 e839045c1ea04a4953582fc46cdfa740 1104 Gene3D G3DSA:1.10.10.10 1038 1098 1.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1178 e839045c1ea04a4953582fc46cdfa740 1104 SMART SM00421 1039 1096 5.5E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1178 e839045c1ea04a4953582fc46cdfa740 1104 Pfam PF13191 AAA ATPase domain 21 159 9.0E-14 T 14-10-2018 Amir_1178 e839045c1ea04a4953582fc46cdfa740 1104 Pfam PF00196 Bacterial regulatory proteins, luxR family 1042 1092 3.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1178 e839045c1ea04a4953582fc46cdfa740 1104 SUPERFAMILY SSF46894 1033 1094 1.29E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_1178 e839045c1ea04a4953582fc46cdfa740 1104 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 1042 1056 3.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1178 e839045c1ea04a4953582fc46cdfa740 1104 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 1072 1084 3.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1178 e839045c1ea04a4953582fc46cdfa740 1104 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 1056 1072 3.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1178 e839045c1ea04a4953582fc46cdfa740 1104 Gene3D G3DSA:1.25.40.10 681 1030 1.4E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_1178 e839045c1ea04a4953582fc46cdfa740 1104 SUPERFAMILY SSF52540 20 238 8.65E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5379 bf7376c9690cd000e72bc0c58f1cb0a4 373 SUPERFAMILY SSF49785 242 370 3.04E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5379 bf7376c9690cd000e72bc0c58f1cb0a4 373 Gene3D G3DSA:2.60.120.260 238 373 6.1E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_0602 0f7b10fcd7f42bd9b33ab956ea97e69d 637 SMART SM00267 310 484 6.7E-43 T 14-10-2018 IPR000160 GGDEF domain Amir_0602 0f7b10fcd7f42bd9b33ab956ea97e69d 637 SUPERFAMILY SSF55073 326 483 5.26E-37 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_0602 0f7b10fcd7f42bd9b33ab956ea97e69d 637 Gene3D G3DSA:3.30.70.270 319 485 4.0E-45 T 14-10-2018 Amir_0602 0f7b10fcd7f42bd9b33ab956ea97e69d 637 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 319 483 8.1E-38 T 14-10-2018 IPR000160 GGDEF domain Amir_0602 0f7b10fcd7f42bd9b33ab956ea97e69d 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 321 480 1.9E-33 T 14-10-2018 IPR000160 GGDEF domain Amir_0602 0f7b10fcd7f42bd9b33ab956ea97e69d 637 Gene3D G3DSA:1.25.40.10 7 318 9.1E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0602 0f7b10fcd7f42bd9b33ab956ea97e69d 637 SUPERFAMILY SSF48452 17 124 4.03E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5649 5f54590658aeba7fb35f91737130b383 113 ProDom PD026347 LSR2-LIKE LSR2 ANTIGEN IMMUNE PRECURSOR RESPONSE SIGNAL PLASMID LYSYL GP61 1 107 1.0E-20 T 14-10-2018 IPR024412 Lsr2 Amir_5649 5f54590658aeba7fb35f91737130b383 113 Gene3D G3DSA:3.30.60.230 1 60 9.6E-26 T 14-10-2018 Amir_5649 5f54590658aeba7fb35f91737130b383 113 Gene3D G3DSA:1.20.890.50 77 113 8.5E-12 T 14-10-2018 Amir_5649 5f54590658aeba7fb35f91737130b383 113 Pfam PF11774 Lsr2 2 110 7.1E-40 T 14-10-2018 IPR024412 Lsr2 Amir_4103 82876058f65136f9e8abc09895b3623b 342 Gene3D G3DSA:1.20.1290.10 33 167 3.4E-11 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amir_4103 82876058f65136f9e8abc09895b3623b 342 SUPERFAMILY SSF69118 18 168 9.12E-23 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amir_4103 82876058f65136f9e8abc09895b3623b 342 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 79 108 1.5E-7 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Amir_4103 82876058f65136f9e8abc09895b3623b 342 SUPERFAMILY SSF69118 222 330 2.24E-5 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amir_4103 82876058f65136f9e8abc09895b3623b 342 Pfam PF02627 Carboxymuconolactone decarboxylase family 64 106 3.5E-5 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Amir_0418 2327a539b0bc7ad0472d8d5447ba3bcb 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0418 2327a539b0bc7ad0472d8d5447ba3bcb 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0418 2327a539b0bc7ad0472d8d5447ba3bcb 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 195 0.0079 T 14-10-2018 Amir_0418 2327a539b0bc7ad0472d8d5447ba3bcb 245 Gene3D G3DSA:3.40.50.720 2 244 3.3E-80 T 14-10-2018 Amir_0418 2327a539b0bc7ad0472d8d5447ba3bcb 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 241 3.4E-61 T 14-10-2018 Amir_0418 2327a539b0bc7ad0472d8d5447ba3bcb 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.1E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0418 2327a539b0bc7ad0472d8d5447ba3bcb 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.1E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0418 2327a539b0bc7ad0472d8d5447ba3bcb 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 2.1E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0418 2327a539b0bc7ad0472d8d5447ba3bcb 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.1E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0418 2327a539b0bc7ad0472d8d5447ba3bcb 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.1E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0418 2327a539b0bc7ad0472d8d5447ba3bcb 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.1E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0418 2327a539b0bc7ad0472d8d5447ba3bcb 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_0418 2327a539b0bc7ad0472d8d5447ba3bcb 245 SUPERFAMILY SSF51735 6 242 2.1E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4723 df23c2bc73fb55363b2bdd5a7151b3d4 310 PIRSF PIRSF001365 4 306 5.8E-68 T 14-10-2018 IPR002220 DapA-like GO:0016829 Amir_4723 df23c2bc73fb55363b2bdd5a7151b3d4 310 PRINTS PR00146 Dihydrodipicolinate synthase signature 47 68 1.1E-6 T 14-10-2018 IPR002220 DapA-like GO:0016829 Amir_4723 df23c2bc73fb55363b2bdd5a7151b3d4 310 PRINTS PR00146 Dihydrodipicolinate synthase signature 115 131 1.1E-6 T 14-10-2018 IPR002220 DapA-like GO:0016829 Amir_4723 df23c2bc73fb55363b2bdd5a7151b3d4 310 PRINTS PR00146 Dihydrodipicolinate synthase signature 139 156 1.1E-6 T 14-10-2018 IPR002220 DapA-like GO:0016829 Amir_4723 df23c2bc73fb55363b2bdd5a7151b3d4 310 SMART SM01130 7 298 2.0E-90 T 14-10-2018 IPR002220 DapA-like GO:0016829 Amir_4723 df23c2bc73fb55363b2bdd5a7151b3d4 310 SUPERFAMILY SSF51569 6 296 1.47E-77 T 14-10-2018 Amir_4723 df23c2bc73fb55363b2bdd5a7151b3d4 310 Gene3D G3DSA:3.20.20.70 2 299 2.8E-80 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_4723 df23c2bc73fb55363b2bdd5a7151b3d4 310 Pfam PF00701 Dihydrodipicolinate synthetase family 9 294 1.2E-45 T 14-10-2018 IPR002220 DapA-like GO:0016829 Amir_2577 7a6e96edb171675c238fbd55c90d8b54 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 19 63 1.3E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_2577 7a6e96edb171675c238fbd55c90d8b54 346 Gene3D G3DSA:1.10.260.40 10 73 8.5E-22 T 14-10-2018 Amir_2577 7a6e96edb171675c238fbd55c90d8b54 346 SUPERFAMILY SSF53822 75 325 1.54E-52 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_2577 7a6e96edb171675c238fbd55c90d8b54 346 SMART SM00354 16 86 1.4E-24 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_2577 7a6e96edb171675c238fbd55c90d8b54 346 Gene3D G3DSA:3.40.50.2300 93 332 6.3E-64 T 14-10-2018 Amir_2577 7a6e96edb171675c238fbd55c90d8b54 346 Pfam PF13377 Periplasmic binding protein-like domain 183 341 3.8E-38 T 14-10-2018 Amir_2577 7a6e96edb171675c238fbd55c90d8b54 346 Gene3D G3DSA:3.40.50.2300 174 333 6.3E-64 T 14-10-2018 Amir_2577 7a6e96edb171675c238fbd55c90d8b54 346 SUPERFAMILY SSF47413 16 72 4.02E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1853 8d7a510211b7fa12ef5b8029abc353e1 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 303 1.1E-39 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amir_4707 ed92b6c66d0748a5723d4b80ecfc49cf 395 PIRSF PIRSF016578 1 395 1.4E-89 T 14-10-2018 Amir_4707 ed92b6c66d0748a5723d4b80ecfc49cf 395 SUPERFAMILY SSF47203 235 381 4.4E-8 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_4707 ed92b6c66d0748a5723d4b80ecfc49cf 395 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 105 1.2E-10 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_4707 ed92b6c66d0748a5723d4b80ecfc49cf 395 Gene3D G3DSA:1.20.140.10 228 393 3.2E-27 T 14-10-2018 Amir_4707 ed92b6c66d0748a5723d4b80ecfc49cf 395 SUPERFAMILY SSF56645 9 210 5.24E-28 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_4707 ed92b6c66d0748a5723d4b80ecfc49cf 395 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 244 372 6.8E-18 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Amir_4707 ed92b6c66d0748a5723d4b80ecfc49cf 395 Gene3D G3DSA:2.40.110.10 113 209 3.9E-21 T 14-10-2018 Amir_4707 ed92b6c66d0748a5723d4b80ecfc49cf 395 Gene3D G3DSA:1.10.540.10 1 111 1.2E-29 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_6285 7c68b006b17471e95763c100bc993d89 263 SUPERFAMILY SSF53335 14 246 2.67E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_6285 7c68b006b17471e95763c100bc993d89 263 Pfam PF04672 S-adenosyl methyltransferase 11 260 1.5E-79 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type Amir_6285 7c68b006b17471e95763c100bc993d89 263 Gene3D G3DSA:3.40.50.150 2 262 1.2E-91 T 14-10-2018 Amir_6285 7c68b006b17471e95763c100bc993d89 263 PIRSF PIRSF017393 2 263 8.5E-85 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type Amir_6944 2d0fde7fab17d669a57dccde6b8ea532 131 SUPERFAMILY SSF54593 9 121 1.51E-12 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_6944 2d0fde7fab17d669a57dccde6b8ea532 131 Gene3D G3DSA:3.10.180.10 4 130 2.5E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_6881 ecf06077585fb661a487aba184c277de 207 Gene3D G3DSA:3.60.15.10 1 183 4.8E-30 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_6881 ecf06077585fb661a487aba184c277de 207 SUPERFAMILY SSF56281 2 178 2.75E-25 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_6881 ecf06077585fb661a487aba184c277de 207 Pfam PF13483 Beta-lactamase superfamily domain 2 172 2.3E-21 T 14-10-2018 Amir_6881 ecf06077585fb661a487aba184c277de 207 SMART SM00849 7 172 3.0E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_2851 0e098644a46171c20332b62307ca46af 273 SUPERFAMILY SSF161098 5 258 4.49E-52 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2851 0e098644a46171c20332b62307ca46af 273 Gene3D G3DSA:1.10.3720.10 4 259 3.1E-50 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2851 0e098644a46171c20332b62307ca46af 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 251 6.2E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0325 8d92c3e200dc9a6949436bbbc5abb964 296 SUPERFAMILY SSF52374 12 291 3.61E-99 T 14-10-2018 Amir_0325 8d92c3e200dc9a6949436bbbc5abb964 296 Pfam PF02569 Pantoate-beta-alanine ligase 17 287 3.1E-93 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Amir_0325 8d92c3e200dc9a6949436bbbc5abb964 296 Gene3D G3DSA:3.40.50.620 5 189 6.2E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_0325 8d92c3e200dc9a6949436bbbc5abb964 296 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 19 288 1.1E-80 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Amir_0325 8d92c3e200dc9a6949436bbbc5abb964 296 Gene3D G3DSA:3.30.1300.10 190 295 8.0E-36 T 14-10-2018 Amir_0325 8d92c3e200dc9a6949436bbbc5abb964 296 Hamap MF_00158 Pantothenate synthetase [panC]. 16 289 37.569 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Amir_3691 67c95ab104f77799800295d92665dc26 171 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 41 118 1.8E-7 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amir_3691 67c95ab104f77799800295d92665dc26 171 SUPERFAMILY SSF50475 38 159 4.12E-17 T 14-10-2018 Amir_3691 67c95ab104f77799800295d92665dc26 171 Gene3D G3DSA:2.30.110.10 32 166 4.2E-16 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_5068 c964187191c239658671ab2fb71007d9 666 SMART SM00382 424 605 3.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5068 c964187191c239658671ab2fb71007d9 666 SUPERFAMILY SSF52540 394 628 1.92E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5068 c964187191c239658671ab2fb71007d9 666 Gene3D G3DSA:1.20.1560.10 8 333 2.1E-55 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_5068 c964187191c239658671ab2fb71007d9 666 SUPERFAMILY SSF90123 21 327 8.89E-56 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_5068 c964187191c239658671ab2fb71007d9 666 Pfam PF00664 ABC transporter transmembrane region 32 299 1.3E-30 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_5068 c964187191c239658671ab2fb71007d9 666 Pfam PF00005 ABC transporter 416 559 1.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5068 c964187191c239658671ab2fb71007d9 666 Gene3D G3DSA:3.40.50.300 391 635 9.7E-62 T 14-10-2018 Amir_5814 8b3d6f158fb0685a83dc3b135dd24923 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 6.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5814 8b3d6f158fb0685a83dc3b135dd24923 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 6.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5814 8b3d6f158fb0685a83dc3b135dd24923 195 Gene3D G3DSA:1.10.357.10 1 188 4.8E-56 T 14-10-2018 Amir_5814 8b3d6f158fb0685a83dc3b135dd24923 195 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 53 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_5814 8b3d6f158fb0685a83dc3b135dd24923 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 9.9E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5814 8b3d6f158fb0685a83dc3b135dd24923 195 SUPERFAMILY SSF48498 82 191 1.02E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_5814 8b3d6f158fb0685a83dc3b135dd24923 195 SUPERFAMILY SSF46689 4 83 6.48E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_6981 984972db3a0fab6acf73847becb90dbf 450 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 220 446 1.6E-81 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Amir_6981 984972db3a0fab6acf73847becb90dbf 450 Gene3D G3DSA:3.30.559.10 205 447 1.8E-84 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_6981 984972db3a0fab6acf73847becb90dbf 450 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Amir_6981 984972db3a0fab6acf73847becb90dbf 450 SUPERFAMILY SSF47005 160 202 2.35E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Amir_6981 984972db3a0fab6acf73847becb90dbf 450 SUPERFAMILY SSF52777 210 446 1.29E-82 T 14-10-2018 Amir_6981 984972db3a0fab6acf73847becb90dbf 450 Gene3D G3DSA:4.10.320.10 165 204 1.2E-14 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Amir_6981 984972db3a0fab6acf73847becb90dbf 450 Pfam PF00364 Biotin-requiring enzyme 5 78 7.6E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Amir_6981 984972db3a0fab6acf73847becb90dbf 450 SUPERFAMILY SSF51230 4 96 1.96E-26 T 14-10-2018 IPR011053 Single hybrid motif Amir_6981 984972db3a0fab6acf73847becb90dbf 450 Gene3D G3DSA:2.40.50.100 2 98 1.5E-23 T 14-10-2018 Amir_6981 984972db3a0fab6acf73847becb90dbf 450 Pfam PF02817 e3 binding domain 165 200 3.6E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Amir_2296 6c9f231a40f3dc1f486984b7d5176518 209 Gene3D G3DSA:3.40.50.150 6 208 1.3E-50 T 14-10-2018 Amir_2296 6c9f231a40f3dc1f486984b7d5176518 209 Pfam PF13649 Methyltransferase domain 49 139 1.3E-20 T 14-10-2018 Amir_2296 6c9f231a40f3dc1f486984b7d5176518 209 SUPERFAMILY SSF53335 4 209 3.38E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_4340 a84309515e5e24e2ae778af64ebba89d 399 Gene3D G3DSA:1.20.1250.20 6 198 1.3E-19 T 14-10-2018 Amir_4340 a84309515e5e24e2ae778af64ebba89d 399 Gene3D G3DSA:1.20.1250.20 206 390 1.6E-16 T 14-10-2018 Amir_4340 a84309515e5e24e2ae778af64ebba89d 399 Pfam PF07690 Major Facilitator Superfamily 31 351 1.1E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_4340 a84309515e5e24e2ae778af64ebba89d 399 SUPERFAMILY SSF103473 3 392 1.44E-44 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_5900 b13bfabe24c08aa5eb546e6e18aea747 476 Gene3D G3DSA:1.10.510.10 88 270 1.4E-42 T 14-10-2018 Amir_5900 b13bfabe24c08aa5eb546e6e18aea747 476 SUPERFAMILY SSF56112 4 316 2.02E-70 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_5900 b13bfabe24c08aa5eb546e6e18aea747 476 SMART SM00220 8 255 1.0E-57 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_5900 b13bfabe24c08aa5eb546e6e18aea747 476 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 120 132 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_5900 b13bfabe24c08aa5eb546e6e18aea747 476 Pfam PF00069 Protein kinase domain 8 247 2.7E-47 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_5900 b13bfabe24c08aa5eb546e6e18aea747 476 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 14 37 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_5900 b13bfabe24c08aa5eb546e6e18aea747 476 Gene3D G3DSA:3.30.200.20 1 84 5.0E-27 T 14-10-2018 Amir_5520 007dc90d06e5d27c7a3da6f536e35f51 394 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 192 23.995 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Amir_5520 007dc90d06e5d27c7a3da6f536e35f51 394 Gene3D G3DSA:3.40.50.300 1 195 1.9E-62 T 14-10-2018 Amir_5520 007dc90d06e5d27c7a3da6f536e35f51 394 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 178 5.9E-39 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Amir_5520 007dc90d06e5d27c7a3da6f536e35f51 394 SUPERFAMILY SSF81301 213 385 1.18E-39 T 14-10-2018 Amir_5520 007dc90d06e5d27c7a3da6f536e35f51 394 SUPERFAMILY SSF52540 2 194 1.55E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5520 007dc90d06e5d27c7a3da6f536e35f51 394 Pfam PF01121 Dephospho-CoA kinase 4 178 3.2E-54 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Amir_5520 007dc90d06e5d27c7a3da6f536e35f51 394 Pfam PF04229 GrpB protein 211 380 2.5E-43 T 14-10-2018 IPR007344 GrpB/Dephospho-CoA kinase Amir_5520 007dc90d06e5d27c7a3da6f536e35f51 394 Gene3D G3DSA:3.30.460.10 210 387 1.2E-35 T 14-10-2018 Amir_4845 66b58b5249b8dc082b57c749b4c834e9 405 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 343 352 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_4845 66b58b5249b8dc082b57c749b4c834e9 405 Gene3D G3DSA:1.10.630.10 2 405 3.5E-102 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4845 66b58b5249b8dc082b57c749b4c834e9 405 Pfam PF00067 Cytochrome P450 48 392 9.2E-22 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4845 66b58b5249b8dc082b57c749b4c834e9 405 PRINTS PR00359 B-class P450 signature 292 319 3.8E-37 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4845 66b58b5249b8dc082b57c749b4c834e9 405 PRINTS PR00359 B-class P450 signature 130 146 3.8E-37 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4845 66b58b5249b8dc082b57c749b4c834e9 405 PRINTS PR00359 B-class P450 signature 341 350 3.8E-37 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4845 66b58b5249b8dc082b57c749b4c834e9 405 PRINTS PR00359 B-class P450 signature 81 92 3.8E-37 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4845 66b58b5249b8dc082b57c749b4c834e9 405 PRINTS PR00359 B-class P450 signature 275 286 3.8E-37 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4845 66b58b5249b8dc082b57c749b4c834e9 405 PRINTS PR00359 B-class P450 signature 147 162 3.8E-37 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4845 66b58b5249b8dc082b57c749b4c834e9 405 PRINTS PR00359 B-class P450 signature 320 335 3.8E-37 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4845 66b58b5249b8dc082b57c749b4c834e9 405 PRINTS PR00359 B-class P450 signature 350 361 3.8E-37 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4845 66b58b5249b8dc082b57c749b4c834e9 405 SUPERFAMILY SSF48264 19 404 1.44E-84 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_0440 0f65b306f288df54c5165d56838d8676 68 PIRSF PIRSF002599 1 68 6.9E-22 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 Amir_0440 0f65b306f288df54c5165d56838d8676 68 SUPERFAMILY SSF50249 2 66 5.83E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_0440 0f65b306f288df54c5165d56838d8676 68 Gene3D G3DSA:2.40.50.140 2 67 1.9E-28 T 14-10-2018 Amir_0440 0f65b306f288df54c5165d56838d8676 68 PRINTS PR00050 Cold shock protein signature 24 33 3.2E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_0440 0f65b306f288df54c5165d56838d8676 68 PRINTS PR00050 Cold shock protein signature 39 57 3.2E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_0440 0f65b306f288df54c5165d56838d8676 68 PRINTS PR00050 Cold shock protein signature 4 19 3.2E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_0440 0f65b306f288df54c5165d56838d8676 68 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 7.1E-27 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_0440 0f65b306f288df54c5165d56838d8676 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 14-10-2018 IPR019844 Cold-shock conserved site Amir_0440 0f65b306f288df54c5165d56838d8676 68 SMART SM00357 3 67 3.5E-27 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Amir_6530 78c522cf92a747bed8c9e87e50ca0a08 238 SUPERFAMILY SSF56112 10 181 2.19E-26 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_6530 78c522cf92a747bed8c9e87e50ca0a08 238 Pfam PF01636 Phosphotransferase enzyme family 113 167 1.9E-12 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_6530 78c522cf92a747bed8c9e87e50ca0a08 238 Gene3D G3DSA:3.90.1200.10 104 185 1.1E-10 T 14-10-2018 Amir_6194 fa982675afb4260c034c5396696d6cf9 261 Gene3D G3DSA:3.40.50.150 72 261 2.7E-47 T 14-10-2018 Amir_6194 fa982675afb4260c034c5396696d6cf9 261 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 41 248 1.0E-41 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Amir_6194 fa982675afb4260c034c5396696d6cf9 261 Gene3D G3DSA:1.10.8.10 10 71 1.1E-5 T 14-10-2018 Amir_6194 fa982675afb4260c034c5396696d6cf9 261 SUPERFAMILY SSF53335 39 253 3.73E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_6194 fa982675afb4260c034c5396696d6cf9 261 TIGRFAM TIGR03704 PrmC_rel_meth: putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific 14 259 2.0E-107 T 14-10-2018 IPR022446 Conserved hypothetical protein CHP03704, protein-(glutamine-N5) methyltransferase Amir_6194 fa982675afb4260c034c5396696d6cf9 261 Pfam PF05175 Methyltransferase small domain 69 173 6.8E-11 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Amir_4198 4d1ea3ae80f36b65f2b54acb643135f7 487 Gene3D G3DSA:2.80.10.50 35 92 8.3E-14 T 14-10-2018 Amir_4198 4d1ea3ae80f36b65f2b54acb643135f7 487 Gene3D G3DSA:2.80.10.50 140 192 1.1E-9 T 14-10-2018 Amir_4198 4d1ea3ae80f36b65f2b54acb643135f7 487 Gene3D G3DSA:2.80.10.50 93 139 3.7E-13 T 14-10-2018 Amir_4198 4d1ea3ae80f36b65f2b54acb643135f7 487 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 88 164 9.5E-20 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4198 4d1ea3ae80f36b65f2b54acb643135f7 487 Pfam PF01095 Pectinesterase 196 479 1.7E-50 T 14-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 Amir_4198 4d1ea3ae80f36b65f2b54acb643135f7 487 SMART SM00458 50 187 9.0E-21 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4198 4d1ea3ae80f36b65f2b54acb643135f7 487 SUPERFAMILY SSF50370 48 188 1.61E-41 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_4198 4d1ea3ae80f36b65f2b54acb643135f7 487 ProSitePatterns PS00503 Pectinesterase signature 2. 344 353 - T 14-10-2018 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 Amir_4198 4d1ea3ae80f36b65f2b54acb643135f7 487 Gene3D G3DSA:2.160.20.10 193 487 6.6E-87 T 14-10-2018 IPR012334 Pectin lyase fold Amir_4198 4d1ea3ae80f36b65f2b54acb643135f7 487 SUPERFAMILY SSF51126 189 485 4.26E-65 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_2173 273a8dd3b737ce19c61cee6dee523ee4 660 PIRSF PIRSF001084 4 660 3.3E-232 T 14-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_2173 273a8dd3b737ce19c61cee6dee523ee4 660 SUPERFAMILY SSF52317 390 584 1.51E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_2173 273a8dd3b737ce19c61cee6dee523ee4 660 Gene3D G3DSA:2.60.40.1180 592 659 3.8E-8 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_2173 273a8dd3b737ce19c61cee6dee523ee4 660 Pfam PF02449 Beta-galactosidase 16 381 3.3E-143 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_2173 273a8dd3b737ce19c61cee6dee523ee4 660 SUPERFAMILY SSF51445 12 384 5.2E-114 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_2173 273a8dd3b737ce19c61cee6dee523ee4 660 Gene3D G3DSA:3.20.20.80 5 388 4.0E-135 T 14-10-2018 Amir_2173 273a8dd3b737ce19c61cee6dee523ee4 660 Pfam PF08533 Beta-galactosidase C-terminal domain 594 658 6.2E-8 T 14-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_2173 273a8dd3b737ce19c61cee6dee523ee4 660 Pfam PF08532 Beta-galactosidase trimerisation domain 392 584 9.5E-47 T 14-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_2173 273a8dd3b737ce19c61cee6dee523ee4 660 Gene3D G3DSA:3.40.50.880 390 587 2.6E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_5169 fc0d0713949838adf2b49f1663fd46fc 152 Gene3D G3DSA:1.10.10.10 2 89 9.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5169 fc0d0713949838adf2b49f1663fd46fc 152 SMART SM00418 28 102 0.0041 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_5169 fc0d0713949838adf2b49f1663fd46fc 152 SUPERFAMILY SSF46785 31 106 1.69E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5169 fc0d0713949838adf2b49f1663fd46fc 152 Pfam PF01022 Bacterial regulatory protein, arsR family 37 75 1.1E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_1236 8052f50f12983a0b34b4b49cf602f54c 299 SUPERFAMILY SSF52402 3 207 4.19E-63 T 14-10-2018 Amir_1236 8052f50f12983a0b34b4b49cf602f54c 299 PIRSF PIRSF002936 1 299 3.9E-132 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Amir_1236 8052f50f12983a0b34b4b49cf602f54c 299 Gene3D G3DSA:3.40.50.620 7 209 4.7E-56 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_1236 8052f50f12983a0b34b4b49cf602f54c 299 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 8 299 3.1E-138 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Amir_1236 8052f50f12983a0b34b4b49cf602f54c 299 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 253 5.1E-46 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Amir_0816 a6df29649a48188acb7ae6743a902551 367 Pfam PF01544 CorA-like Mg2+ transporter protein 69 363 9.7E-63 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Amir_0816 a6df29649a48188acb7ae6743a902551 367 Gene3D G3DSA:1.20.58.340 290 367 1.5E-23 T 14-10-2018 Amir_0816 a6df29649a48188acb7ae6743a902551 367 SUPERFAMILY SSF144083 302 364 1.57E-19 T 14-10-2018 Amir_0816 a6df29649a48188acb7ae6743a902551 367 SUPERFAMILY SSF143865 37 299 1.7E-67 T 14-10-2018 Amir_0816 a6df29649a48188acb7ae6743a902551 367 Gene3D G3DSA:1.20.58.340 179 289 3.0E-30 T 14-10-2018 Amir_0816 a6df29649a48188acb7ae6743a902551 367 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 61 367 1.0E-60 T 14-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 Amir_0816 a6df29649a48188acb7ae6743a902551 367 Gene3D G3DSA:3.30.460.20 47 178 4.0E-31 T 14-10-2018 Amir_4076 6644082cb44b0a75bfab3b391b382e8c 516 Gene3D G3DSA:3.30.410.40 147 451 1.2E-150 T 14-10-2018 Amir_4076 6644082cb44b0a75bfab3b391b382e8c 516 Pfam PF05199 GMC oxidoreductase 370 508 4.0E-34 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Amir_4076 6644082cb44b0a75bfab3b391b382e8c 516 Pfam PF00732 GMC oxidoreductase 7 295 1.1E-61 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Amir_4076 6644082cb44b0a75bfab3b391b382e8c 516 SUPERFAMILY SSF54373 334 457 3.92E-20 T 14-10-2018 Amir_4076 6644082cb44b0a75bfab3b391b382e8c 516 PIRSF PIRSF000137 3 354 6.2E-66 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Amir_4076 6644082cb44b0a75bfab3b391b382e8c 516 PIRSF PIRSF000137 326 516 2.1E-42 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Amir_4076 6644082cb44b0a75bfab3b391b382e8c 516 Gene3D G3DSA:3.50.50.60 7 511 1.2E-150 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4076 6644082cb44b0a75bfab3b391b382e8c 516 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 256 270 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Amir_4076 6644082cb44b0a75bfab3b391b382e8c 516 SUPERFAMILY SSF51905 6 515 3.11E-68 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5129 a01dce1d4f1c269166428dc8c161d90d 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 4.0E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_5129 a01dce1d4f1c269166428dc8c161d90d 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 4.0E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_5129 a01dce1d4f1c269166428dc8c161d90d 254 SMART SM00420 9 61 1.5E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_5129 a01dce1d4f1c269166428dc8c161d90d 254 Pfam PF08220 DeoR-like helix-turn-helix domain 9 60 1.1E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_5129 a01dce1d4f1c269166428dc8c161d90d 254 SUPERFAMILY SSF100950 77 235 1.57E-23 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Amir_5129 a01dce1d4f1c269166428dc8c161d90d 254 Gene3D G3DSA:1.10.10.10 6 64 8.2E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5129 a01dce1d4f1c269166428dc8c161d90d 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Amir_5129 a01dce1d4f1c269166428dc8c161d90d 254 SUPERFAMILY SSF46785 7 71 1.32E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5129 a01dce1d4f1c269166428dc8c161d90d 254 SMART SM01134 75 235 6.3E-57 T 14-10-2018 Amir_5129 a01dce1d4f1c269166428dc8c161d90d 254 Pfam PF00455 DeoR C terminal sensor domain 77 233 2.2E-41 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain Amir_0939 e95638f7c6a8e443269abd6f0291ab53 386 Gene3D G3DSA:2.30.42.10 159 244 1.1E-15 T 14-10-2018 Amir_0939 e95638f7c6a8e443269abd6f0291ab53 386 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 282 370 1.3E-10 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Amir_0939 e95638f7c6a8e443269abd6f0291ab53 386 Pfam PF13180 PDZ domain 181 248 9.7E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Amir_0939 e95638f7c6a8e443269abd6f0291ab53 386 SUPERFAMILY SSF50156 180 283 2.23E-19 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Amir_0939 e95638f7c6a8e443269abd6f0291ab53 386 SMART SM00228 165 239 6.5E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Amir_0939 e95638f7c6a8e443269abd6f0291ab53 386 Gene3D G3DSA:3.30.230.10 245 380 1.2E-22 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amir_0939 e95638f7c6a8e443269abd6f0291ab53 386 SUPERFAMILY SSF54211 269 374 7.59E-21 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_5206 843b4964a8b91136676f72e8d17c89c2 649 Gene3D G3DSA:4.10.860.10 207 245 1.9E-7 T 14-10-2018 Amir_5206 843b4964a8b91136676f72e8d17c89c2 649 Pfam PF02151 UvrB/uvrC motif 210 242 5.8E-10 T 14-10-2018 IPR001943 UVR domain GO:0005515 Amir_5206 843b4964a8b91136676f72e8d17c89c2 649 Gene3D G3DSA:1.10.150.20 580 639 4.8E-22 T 14-10-2018 Amir_5206 843b4964a8b91136676f72e8d17c89c2 649 Pfam PF14520 Helix-hairpin-helix domain 587 638 2.4E-8 T 14-10-2018 Amir_5206 843b4964a8b91136676f72e8d17c89c2 649 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 637 30.035 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Amir_5206 843b4964a8b91136676f72e8d17c89c2 649 SMART SM00278 618 637 0.48 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amir_5206 843b4964a8b91136676f72e8d17c89c2 649 SMART SM00278 586 605 9.2 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amir_5206 843b4964a8b91136676f72e8d17c89c2 649 Gene3D G3DSA:3.30.420.340 394 579 9.2E-50 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily Amir_5206 843b4964a8b91136676f72e8d17c89c2 649 SUPERFAMILY SSF82771 17 101 5.49E-23 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Amir_5206 843b4964a8b91136676f72e8d17c89c2 649 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 401 572 2.4E-47 T 14-10-2018 IPR001162 UvrC family homology region Amir_5206 843b4964a8b91136676f72e8d17c89c2 649 SMART SM00465 17 99 2.1E-22 T 14-10-2018 IPR000305 GIY-YIG endonuclease Amir_5206 843b4964a8b91136676f72e8d17c89c2 649 Pfam PF01541 GIY-YIG catalytic domain 19 92 1.2E-10 T 14-10-2018 IPR000305 GIY-YIG endonuclease Amir_5206 843b4964a8b91136676f72e8d17c89c2 649 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 13 619 5.3E-149 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Amir_5206 843b4964a8b91136676f72e8d17c89c2 649 Gene3D G3DSA:3.40.1440.10 6 103 8.7E-29 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Amir_5206 843b4964a8b91136676f72e8d17c89c2 649 SUPERFAMILY SSF46600 195 247 6.93E-14 T 14-10-2018 IPR036876 UVR domain superfamily Amir_5206 843b4964a8b91136676f72e8d17c89c2 649 SUPERFAMILY SSF47781 531 639 3.5E-24 T 14-10-2018 IPR010994 RuvA domain 2-like Amir_6115 e0d86715be69ca0c0bca1a275f3350ab 501 Pfam PF00171 Aldehyde dehydrogenase family 19 466 8.6E-130 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_6115 e0d86715be69ca0c0bca1a275f3350ab 501 PIRSF PIRSF036492 26 499 1.8E-90 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 Amir_6115 e0d86715be69ca0c0bca1a275f3350ab 501 SUPERFAMILY SSF53720 14 468 4.71E-132 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_6115 e0d86715be69ca0c0bca1a275f3350ab 501 Gene3D G3DSA:3.40.309.10 250 436 2.2E-142 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_6115 e0d86715be69ca0c0bca1a275f3350ab 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Amir_6115 e0d86715be69ca0c0bca1a275f3350ab 501 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Amir_6115 e0d86715be69ca0c0bca1a275f3350ab 501 Gene3D G3DSA:3.40.605.10 20 462 2.2E-142 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_1001 d1b4e78f9a2d3625e9c632939ef73e33 390 Gene3D G3DSA:3.40.50.2000 6 358 1.8E-119 T 14-10-2018 Amir_1001 d1b4e78f9a2d3625e9c632939ef73e33 390 SUPERFAMILY SSF53756 1 370 2.28E-102 T 14-10-2018 Amir_1001 d1b4e78f9a2d3625e9c632939ef73e33 390 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 25 367 1.7E-92 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_1001 d1b4e78f9a2d3625e9c632939ef73e33 390 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 367 1.7E-106 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 Amir_1001 d1b4e78f9a2d3625e9c632939ef73e33 390 Gene3D G3DSA:3.40.50.2000 191 353 1.8E-119 T 14-10-2018 Amir_0375 51977cf9c75eb4357e60c42df263ad81 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 19 44 6.6E-31 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_0375 51977cf9c75eb4357e60c42df263ad81 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 416 445 6.6E-31 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_0375 51977cf9c75eb4357e60c42df263ad81 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 414 6.6E-31 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_0375 51977cf9c75eb4357e60c42df263ad81 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 205 225 6.6E-31 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_0375 51977cf9c75eb4357e60c42df263ad81 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 464 493 6.6E-31 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_0375 51977cf9c75eb4357e60c42df263ad81 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 310 339 6.6E-31 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_0375 51977cf9c75eb4357e60c42df263ad81 544 SMART SM00304 417 477 120.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_0375 51977cf9c75eb4357e60c42df263ad81 544 SMART SM00304 229 281 6.9E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_0375 51977cf9c75eb4357e60c42df263ad81 544 SUPERFAMILY SSF58104 249 542 5.89E-65 T 14-10-2018 Amir_0375 51977cf9c75eb4357e60c42df263ad81 544 SMART SM00283 289 543 3.3E-60 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_0375 51977cf9c75eb4357e60c42df263ad81 544 Pfam PF00672 HAMP domain 229 277 2.2E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_0375 51977cf9c75eb4357e60c42df263ad81 544 Pfam PF12729 Four helix bundle sensory module for signal transduction 18 200 6.7E-11 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Amir_0375 51977cf9c75eb4357e60c42df263ad81 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 348 511 1.1E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_0375 51977cf9c75eb4357e60c42df263ad81 544 Gene3D G3DSA:1.10.287.950 229 544 1.0E-66 T 14-10-2018 Amir_0751 82e51205c2d06d5b4244ef56c819c7c5 342 SUPERFAMILY SSF52540 28 250 7.48E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0751 82e51205c2d06d5b4244ef56c819c7c5 342 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0751 82e51205c2d06d5b4244ef56c819c7c5 342 Gene3D G3DSA:3.40.50.300 29 296 1.4E-56 T 14-10-2018 Amir_0751 82e51205c2d06d5b4244ef56c819c7c5 342 Pfam PF00005 ABC transporter 44 188 2.1E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0751 82e51205c2d06d5b4244ef56c819c7c5 342 SMART SM00382 52 245 3.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0144 983b02ed036eb3877ee1a1bd8855a996 155 SUPERFAMILY SSF46785 4 151 4.8E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0144 983b02ed036eb3877ee1a1bd8855a996 155 Pfam PF12802 MarR family 38 99 1.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0144 983b02ed036eb3877ee1a1bd8855a996 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 126 146 1.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0144 983b02ed036eb3877ee1a1bd8855a996 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 1.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0144 983b02ed036eb3877ee1a1bd8855a996 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 1.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0144 983b02ed036eb3877ee1a1bd8855a996 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 1.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0144 983b02ed036eb3877ee1a1bd8855a996 155 SMART SM00347 33 136 5.4E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0144 983b02ed036eb3877ee1a1bd8855a996 155 Gene3D G3DSA:1.10.10.10 7 154 2.5E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6462 515bab073b7b3cb56fa2d44273d67557 140 Gene3D G3DSA:1.20.1300.10 20 131 1.9E-17 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_6462 515bab073b7b3cb56fa2d44273d67557 140 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 19 122 1.8E-27 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_6462 515bab073b7b3cb56fa2d44273d67557 140 SUPERFAMILY SSF81343 18 124 1.22E-26 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_6462 515bab073b7b3cb56fa2d44273d67557 140 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 19 121 1.9E-21 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_0655 27018c495f9d77cd532c14a4caffc083 197 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 180 25.775 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Amir_0655 27018c495f9d77cd532c14a4caffc083 197 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 176 6.2E-51 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Amir_0655 27018c495f9d77cd532c14a4caffc083 197 Gene3D G3DSA:2.40.240.10 2 95 9.1E-27 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amir_0655 27018c495f9d77cd532c14a4caffc083 197 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 11 91 1.0E-19 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Amir_0655 27018c495f9d77cd532c14a4caffc083 197 SUPERFAMILY SSF50715 11 176 9.59E-49 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amir_0655 27018c495f9d77cd532c14a4caffc083 197 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 177 1.3E-19 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain Amir_0655 27018c495f9d77cd532c14a4caffc083 197 Gene3D G3DSA:2.170.120.20 96 179 3.7E-17 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal Amir_0655 27018c495f9d77cd532c14a4caffc083 197 Pfam PF01386 Ribosomal L25p family 6 92 1.4E-24 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Amir_3692 f6e8354efa9b406ae5aa9a17b110007d 397 PRINTS PR00385 P450 superfamily signature 337 346 1.8E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3692 f6e8354efa9b406ae5aa9a17b110007d 397 PRINTS PR00385 P450 superfamily signature 234 251 1.8E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3692 f6e8354efa9b406ae5aa9a17b110007d 397 PRINTS PR00385 P450 superfamily signature 269 280 1.8E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3692 f6e8354efa9b406ae5aa9a17b110007d 397 PRINTS PR00385 P450 superfamily signature 346 357 1.8E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3692 f6e8354efa9b406ae5aa9a17b110007d 397 Gene3D G3DSA:1.10.630.10 21 397 7.6E-95 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3692 f6e8354efa9b406ae5aa9a17b110007d 397 PRINTS PR00359 B-class P450 signature 192 214 9.7E-33 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3692 f6e8354efa9b406ae5aa9a17b110007d 397 PRINTS PR00359 B-class P450 signature 154 169 9.7E-33 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3692 f6e8354efa9b406ae5aa9a17b110007d 397 PRINTS PR00359 B-class P450 signature 269 280 9.7E-33 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3692 f6e8354efa9b406ae5aa9a17b110007d 397 PRINTS PR00359 B-class P450 signature 90 101 9.7E-33 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3692 f6e8354efa9b406ae5aa9a17b110007d 397 PRINTS PR00359 B-class P450 signature 289 316 9.7E-33 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3692 f6e8354efa9b406ae5aa9a17b110007d 397 PRINTS PR00359 B-class P450 signature 337 346 9.7E-33 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3692 f6e8354efa9b406ae5aa9a17b110007d 397 PRINTS PR00359 B-class P450 signature 346 357 9.7E-33 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3692 f6e8354efa9b406ae5aa9a17b110007d 397 PRINTS PR00359 B-class P450 signature 137 153 9.7E-33 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3692 f6e8354efa9b406ae5aa9a17b110007d 397 SUPERFAMILY SSF48264 29 397 9.43E-79 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3692 f6e8354efa9b406ae5aa9a17b110007d 397 Pfam PF00067 Cytochrome P450 187 367 4.4E-15 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3692 f6e8354efa9b406ae5aa9a17b110007d 397 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 339 348 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_0368 b4a0beb3e53707dc4c520d6a4e6619e0 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0368 b4a0beb3e53707dc4c520d6a4e6619e0 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0368 b4a0beb3e53707dc4c520d6a4e6619e0 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0368 b4a0beb3e53707dc4c520d6a4e6619e0 283 SUPERFAMILY SSF51735 6 250 6.67E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0368 b4a0beb3e53707dc4c520d6a4e6619e0 283 Gene3D G3DSA:3.40.50.720 4 281 2.0E-73 T 14-10-2018 Amir_0368 b4a0beb3e53707dc4c520d6a4e6619e0 283 Pfam PF00106 short chain dehydrogenase 8 191 4.9E-54 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0368 b4a0beb3e53707dc4c520d6a4e6619e0 283 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_0368 b4a0beb3e53707dc4c520d6a4e6619e0 283 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 184 0.0027 T 14-10-2018 Amir_0368 b4a0beb3e53707dc4c520d6a4e6619e0 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0368 b4a0beb3e53707dc4c520d6a4e6619e0 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0368 b4a0beb3e53707dc4c520d6a4e6619e0 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0368 b4a0beb3e53707dc4c520d6a4e6619e0 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0368 b4a0beb3e53707dc4c520d6a4e6619e0 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1934 6fbb3046838b3420551fbaf6db6e1848 274 PRINTS PR01438 Universal stress protein signature 132 150 1.9E-10 T 14-10-2018 IPR006015 Universal stress protein A Amir_1934 6fbb3046838b3420551fbaf6db6e1848 274 PRINTS PR01438 Universal stress protein signature 246 268 1.9E-10 T 14-10-2018 IPR006015 Universal stress protein A Amir_1934 6fbb3046838b3420551fbaf6db6e1848 274 Pfam PF00582 Universal stress protein family 5 126 8.6E-9 T 14-10-2018 IPR006016 UspA Amir_1934 6fbb3046838b3420551fbaf6db6e1848 274 Pfam PF00582 Universal stress protein family 134 268 2.0E-24 T 14-10-2018 IPR006016 UspA Amir_1934 6fbb3046838b3420551fbaf6db6e1848 274 SUPERFAMILY SSF52402 4 129 4.86E-14 T 14-10-2018 Amir_1934 6fbb3046838b3420551fbaf6db6e1848 274 SUPERFAMILY SSF52402 134 268 1.26E-26 T 14-10-2018 Amir_1934 6fbb3046838b3420551fbaf6db6e1848 274 Gene3D G3DSA:3.40.50.12370 2 270 5.5E-74 T 14-10-2018 Amir_3508 108c22ec151aefd8eeae60c6798bf336 319 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 88 307 4.2E-55 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_3508 108c22ec151aefd8eeae60c6798bf336 319 SMART SM00062 87 309 1.1E-66 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_3508 108c22ec151aefd8eeae60c6798bf336 319 Gene3D G3DSA:3.40.190.10 175 271 2.9E-76 T 14-10-2018 Amir_3508 108c22ec151aefd8eeae60c6798bf336 319 SUPERFAMILY SSF53850 77 309 8.58E-61 T 14-10-2018 Amir_3508 108c22ec151aefd8eeae60c6798bf336 319 Gene3D G3DSA:3.40.190.10 88 306 2.9E-76 T 14-10-2018 Amir_3508 108c22ec151aefd8eeae60c6798bf336 319 SMART SM00079 87 308 0.0013 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Amir_4833 57e835d438976d22b1738d1aa445da1d 181 Pfam PF08002 Protein of unknown function (DUF1697) 4 139 1.4E-38 T 14-10-2018 IPR012545 Protein of unknown function DUF1697 Amir_4833 57e835d438976d22b1738d1aa445da1d 181 Gene3D G3DSA:3.30.70.1280 2 91 2.0E-22 T 14-10-2018 Amir_4833 57e835d438976d22b1738d1aa445da1d 181 PIRSF PIRSF008502 2 180 2.0E-39 T 14-10-2018 IPR012545 Protein of unknown function DUF1697 Amir_4833 57e835d438976d22b1738d1aa445da1d 181 SUPERFAMILY SSF160379 4 178 7.45E-47 T 14-10-2018 Amir_6550 4db636ef6edbc5d08ddcda292d644ace 101 SUPERFAMILY SSF52833 2 101 1.25E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_6550 4db636ef6edbc5d08ddcda292d644ace 101 Gene3D G3DSA:3.40.30.10 4 101 4.0E-22 T 14-10-2018 Amir_6550 4db636ef6edbc5d08ddcda292d644ace 101 PIRSF PIRSF000077 1 101 9.1E-25 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Amir_6550 4db636ef6edbc5d08ddcda292d644ace 101 Pfam PF00085 Thioredoxin 2 98 1.5E-21 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 Amir_5667 7930691fa05c00a210f481ec67c71a21 190 Pfam PF00583 Acetyltransferase (GNAT) family 67 153 1.9E-14 T 14-10-2018 IPR000182 GNAT domain Amir_5667 7930691fa05c00a210f481ec67c71a21 190 Gene3D G3DSA:3.40.630.30 9 163 5.8E-22 T 14-10-2018 Amir_5667 7930691fa05c00a210f481ec67c71a21 190 SUPERFAMILY SSF55729 15 164 6.18E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_1151 4538b2f02d7996efb8d8b25f919abd19 302 SUPERFAMILY SSF46785 1 109 8.8E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1151 4538b2f02d7996efb8d8b25f919abd19 302 Pfam PF03466 LysR substrate binding domain 86 291 1.2E-43 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_1151 4538b2f02d7996efb8d8b25f919abd19 302 SUPERFAMILY SSF53850 86 296 9.41E-43 T 14-10-2018 Amir_1151 4538b2f02d7996efb8d8b25f919abd19 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 8.4E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_1151 4538b2f02d7996efb8d8b25f919abd19 302 Gene3D G3DSA:3.40.190.290 91 299 8.2E-34 T 14-10-2018 Amir_1151 4538b2f02d7996efb8d8b25f919abd19 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_1151 4538b2f02d7996efb8d8b25f919abd19 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_1151 4538b2f02d7996efb8d8b25f919abd19 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_1151 4538b2f02d7996efb8d8b25f919abd19 302 Gene3D G3DSA:1.10.10.10 1 90 1.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0128 1f70b0b724c37f4e5d5fb9f8d0e51210 394 Pfam PF13450 NAD(P)-binding Rossmann-like domain 10 79 5.1E-18 T 14-10-2018 Amir_0128 1f70b0b724c37f4e5d5fb9f8d0e51210 394 SUPERFAMILY SSF54373 254 325 1.31E-24 T 14-10-2018 Amir_0128 1f70b0b724c37f4e5d5fb9f8d0e51210 394 Gene3D G3DSA:3.40.50.720 3 97 5.6E-33 T 14-10-2018 Amir_0128 1f70b0b724c37f4e5d5fb9f8d0e51210 394 Gene3D G3DSA:3.40.50.720 122 267 8.1E-27 T 14-10-2018 Amir_0128 1f70b0b724c37f4e5d5fb9f8d0e51210 394 Gene3D G3DSA:3.40.50.720 318 386 1.1E-19 T 14-10-2018 Amir_0128 1f70b0b724c37f4e5d5fb9f8d0e51210 394 SUPERFAMILY SSF51971 6 376 1.18E-48 T 14-10-2018 Amir_0128 1f70b0b724c37f4e5d5fb9f8d0e51210 394 Pfam PF03275 UDP-galactopyranose mutase 154 361 1.3E-83 T 14-10-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 Amir_0128 1f70b0b724c37f4e5d5fb9f8d0e51210 394 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 6 379 2.4E-105 T 14-10-2018 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 Amir_1396 cd4693027cea556f59144355909a5108 843 Gene3D G3DSA:3.30.10.20 716 781 1.1E-16 T 14-10-2018 Amir_1396 cd4693027cea556f59144355909a5108 843 Gene3D G3DSA:3.30.10.20 583 645 7.5E-13 T 14-10-2018 Amir_1396 cd4693027cea556f59144355909a5108 843 SUPERFAMILY SSF54184 785 841 1.44E-7 T 14-10-2018 Amir_1396 cd4693027cea556f59144355909a5108 843 SUPERFAMILY SSF56112 15 364 2.8E-76 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_1396 cd4693027cea556f59144355909a5108 843 Pfam PF00069 Protein kinase domain 18 260 1.1E-43 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_1396 cd4693027cea556f59144355909a5108 843 Gene3D G3DSA:3.30.10.20 648 715 8.3E-12 T 14-10-2018 Amir_1396 cd4693027cea556f59144355909a5108 843 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 136 148 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_1396 cd4693027cea556f59144355909a5108 843 SMART SM00220 17 266 7.6E-57 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_1396 cd4693027cea556f59144355909a5108 843 Gene3D G3DSA:3.30.200.20 6 96 5.1E-29 T 14-10-2018 Amir_1396 cd4693027cea556f59144355909a5108 843 Pfam PF03793 PASTA domain 649 713 1.2E-9 T 14-10-2018 IPR005543 PASTA domain Amir_1396 cd4693027cea556f59144355909a5108 843 Pfam PF03793 PASTA domain 584 643 1.1E-8 T 14-10-2018 IPR005543 PASTA domain Amir_1396 cd4693027cea556f59144355909a5108 843 Pfam PF03793 PASTA domain 785 841 2.2E-12 T 14-10-2018 IPR005543 PASTA domain Amir_1396 cd4693027cea556f59144355909a5108 843 Pfam PF03793 PASTA domain 720 782 3.5E-15 T 14-10-2018 IPR005543 PASTA domain Amir_1396 cd4693027cea556f59144355909a5108 843 Gene3D G3DSA:3.30.10.20 782 842 4.1E-14 T 14-10-2018 Amir_1396 cd4693027cea556f59144355909a5108 843 Gene3D G3DSA:1.10.510.10 98 279 1.8E-45 T 14-10-2018 Amir_1396 cd4693027cea556f59144355909a5108 843 SMART SM00740 578 644 2.9E-9 T 14-10-2018 IPR005543 PASTA domain Amir_1396 cd4693027cea556f59144355909a5108 843 SMART SM00740 785 843 1.4E-8 T 14-10-2018 IPR005543 PASTA domain Amir_1396 cd4693027cea556f59144355909a5108 843 SMART SM00740 645 713 4.9E-5 T 14-10-2018 IPR005543 PASTA domain Amir_1396 cd4693027cea556f59144355909a5108 843 SMART SM00740 714 782 1.8E-13 T 14-10-2018 IPR005543 PASTA domain Amir_2168 91da683654e2a1aeedb95ffc9607c21a 875 Gene3D G3DSA:3.40.50.1700 368 654 3.2E-183 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Amir_2168 91da683654e2a1aeedb95ffc9607c21a 875 SUPERFAMILY SSF51445 33 373 1.02E-71 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_2168 91da683654e2a1aeedb95ffc9607c21a 875 Gene3D G3DSA:3.20.20.300 48 690 3.2E-183 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Amir_2168 91da683654e2a1aeedb95ffc9607c21a 875 Gene3D G3DSA:2.60.40.10 692 795 4.8E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2168 91da683654e2a1aeedb95ffc9607c21a 875 Pfam PF14310 Fibronectin type III-like domain 716 784 3.6E-16 T 14-10-2018 IPR026891 Fibronectin type III-like domain Amir_2168 91da683654e2a1aeedb95ffc9607c21a 875 PRINTS PR00133 Glycosyl hydrolase family 3 signature 184 200 2.4E-7 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_2168 91da683654e2a1aeedb95ffc9607c21a 875 PRINTS PR00133 Glycosyl hydrolase family 3 signature 96 115 2.4E-7 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_2168 91da683654e2a1aeedb95ffc9607c21a 875 SUPERFAMILY SSF52279 375 690 2.48E-43 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Amir_2168 91da683654e2a1aeedb95ffc9607c21a 875 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 81 336 1.8E-35 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_2168 91da683654e2a1aeedb95ffc9607c21a 875 Gene3D G3DSA:2.60.120.380 449 548 3.2E-183 T 14-10-2018 Amir_2168 91da683654e2a1aeedb95ffc9607c21a 875 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 375 687 2.0E-53 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 Amir_2168 91da683654e2a1aeedb95ffc9607c21a 875 SUPERFAMILY SSF50405 435 504 1.03E-8 T 14-10-2018 IPR008999 Actin-crosslinking Amir_2168 91da683654e2a1aeedb95ffc9607c21a 875 SMART SM01217 716 784 2.6E-22 T 14-10-2018 IPR026891 Fibronectin type III-like domain Amir_2207 54dad4b0bbbcd2e9bcd754e0601bf498 244 Gene3D G3DSA:3.40.50.2300 15 143 2.6E-36 T 14-10-2018 Amir_2207 54dad4b0bbbcd2e9bcd754e0601bf498 244 SMART SM00862 163 239 3.8E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2207 54dad4b0bbbcd2e9bcd754e0601bf498 244 SUPERFAMILY SSF46894 140 239 7.37E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_2207 54dad4b0bbbcd2e9bcd754e0601bf498 244 SMART SM00448 18 128 3.7E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2207 54dad4b0bbbcd2e9bcd754e0601bf498 244 Pfam PF00072 Response regulator receiver domain 20 128 6.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2207 54dad4b0bbbcd2e9bcd754e0601bf498 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 238 2.1E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2207 54dad4b0bbbcd2e9bcd754e0601bf498 244 Gene3D G3DSA:1.10.10.10 144 244 9.2E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2207 54dad4b0bbbcd2e9bcd754e0601bf498 244 SUPERFAMILY SSF52172 15 139 4.98E-40 T 14-10-2018 IPR011006 CheY-like superfamily Amir_6350 d0bc6ac55f9bc6a6e10ef87671dc5e5d 230 TIGRFAM TIGR03089 TIGR03089: TIGR03089 family protein 12 225 1.7E-52 T 14-10-2018 IPR017523 Conserved hypothetical protein CHP03089 Amir_6350 d0bc6ac55f9bc6a6e10ef87671dc5e5d 230 SUPERFAMILY SSF56801 2 225 1.44E-17 T 14-10-2018 Amir_6350 d0bc6ac55f9bc6a6e10ef87671dc5e5d 230 Gene3D G3DSA:3.40.50.12780 9 108 4.5E-8 T 14-10-2018 Amir_2152 5328eea8f60204aef16c068a5208c8b9 244 PIRSF PIRSF036625 1 244 4.2E-49 T 14-10-2018 IPR012074 GAF-ANTAR transcription anti-termination regulator, putative Amir_2152 5328eea8f60204aef16c068a5208c8b9 244 SMART SM01012 182 237 2.3E-22 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_2152 5328eea8f60204aef16c068a5208c8b9 244 Gene3D G3DSA:1.10.10.10 184 244 4.0E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2152 5328eea8f60204aef16c068a5208c8b9 244 SUPERFAMILY SSF55781 34 181 3.69E-21 T 14-10-2018 Amir_2152 5328eea8f60204aef16c068a5208c8b9 244 SMART SM00065 30 180 1.2E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2152 5328eea8f60204aef16c068a5208c8b9 244 Pfam PF13185 GAF domain 30 170 1.3E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2152 5328eea8f60204aef16c068a5208c8b9 244 Pfam PF03861 ANTAR domain 185 237 1.2E-19 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_2152 5328eea8f60204aef16c068a5208c8b9 244 Gene3D G3DSA:3.30.450.40 5 183 4.3E-26 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_4761 7d046c6b83445a664ad5b5a2c07802a9 313 Pfam PF04072 Leucine carboxyl methyltransferase 23 202 1.5E-48 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 Amir_4761 7d046c6b83445a664ad5b5a2c07802a9 313 SUPERFAMILY SSF53335 19 266 2.24E-60 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_4761 7d046c6b83445a664ad5b5a2c07802a9 313 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 21 279 1.4E-70 T 14-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 Amir_4761 7d046c6b83445a664ad5b5a2c07802a9 313 Gene3D G3DSA:3.40.50.150 9 298 1.4E-70 T 14-10-2018 Amir_0439 bd0178191396fdd9d3eabbbb1203be47 202 SUPERFAMILY SSF51219 4 198 6.8E-32 T 14-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily Amir_0439 bd0178191396fdd9d3eabbbb1203be47 202 Pfam PF01987 Mitochondrial biogenesis AIM24 10 196 1.3E-25 T 14-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 Amir_0439 bd0178191396fdd9d3eabbbb1203be47 202 Gene3D G3DSA:3.60.160.10 1 202 2.2E-28 T 14-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily Amir_3202 5736f310c063d1fe336d6baaad9a1f54 193 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 80 182 1.5E-6 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal Amir_3202 5736f310c063d1fe336d6baaad9a1f54 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 53 2.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3202 5736f310c063d1fe336d6baaad9a1f54 193 SUPERFAMILY SSF48498 78 191 1.42E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3202 5736f310c063d1fe336d6baaad9a1f54 193 SUPERFAMILY SSF46689 3 78 1.08E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3202 5736f310c063d1fe336d6baaad9a1f54 193 Gene3D G3DSA:1.10.357.10 1 191 8.5E-29 T 14-10-2018 Amir_4028 64b108bdc4cf92be78e1d621b672eb44 493 SMART SM00220 18 272 4.1E-55 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_4028 64b108bdc4cf92be78e1d621b672eb44 493 Pfam PF00069 Protein kinase domain 19 269 5.4E-48 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_4028 64b108bdc4cf92be78e1d621b672eb44 493 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 141 153 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_4028 64b108bdc4cf92be78e1d621b672eb44 493 Gene3D G3DSA:3.30.200.20 8 101 4.3E-26 T 14-10-2018 Amir_4028 64b108bdc4cf92be78e1d621b672eb44 493 SUPERFAMILY SSF56112 11 275 4.86E-66 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_4028 64b108bdc4cf92be78e1d621b672eb44 493 Gene3D G3DSA:1.10.510.10 102 282 1.2E-41 T 14-10-2018 Amir_4028 64b108bdc4cf92be78e1d621b672eb44 493 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 24 47 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_0866 d5268f9d60171b2c59f957f5da94c6ad 405 Pfam PF00480 ROK family 84 381 3.3E-48 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_0866 d5268f9d60171b2c59f957f5da94c6ad 405 SUPERFAMILY SSF53067 81 383 6.48E-50 T 14-10-2018 Amir_0866 d5268f9d60171b2c59f957f5da94c6ad 405 SUPERFAMILY SSF46785 10 73 2.0E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0866 d5268f9d60171b2c59f957f5da94c6ad 405 Gene3D G3DSA:3.30.420.40 210 367 8.3E-39 T 14-10-2018 Amir_0866 d5268f9d60171b2c59f957f5da94c6ad 405 Gene3D G3DSA:3.30.420.40 78 209 2.4E-27 T 14-10-2018 Amir_0866 d5268f9d60171b2c59f957f5da94c6ad 405 Gene3D G3DSA:1.10.10.10 2 77 6.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4614 b49ed832ff620e0862d11d3d796e4bb4 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 1.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4614 b49ed832ff620e0862d11d3d796e4bb4 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4614 b49ed832ff620e0862d11d3d796e4bb4 222 Gene3D G3DSA:1.10.357.10 3 196 1.6E-49 T 14-10-2018 Amir_4614 b49ed832ff620e0862d11d3d796e4bb4 222 SUPERFAMILY SSF48498 86 191 9.1E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4614 b49ed832ff620e0862d11d3d796e4bb4 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 1.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4614 b49ed832ff620e0862d11d3d796e4bb4 222 SUPERFAMILY SSF46689 7 86 1.45E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0333 e7e461cef1fe9f511e77491cafe26a7c 282 SUPERFAMILY SSF52540 12 238 2.97E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0333 e7e461cef1fe9f511e77491cafe26a7c 282 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0333 e7e461cef1fe9f511e77491cafe26a7c 282 SMART SM00382 36 225 6.5E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0333 e7e461cef1fe9f511e77491cafe26a7c 282 Pfam PF00005 ABC transporter 28 175 3.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0333 e7e461cef1fe9f511e77491cafe26a7c 282 Gene3D G3DSA:3.40.50.300 12 265 2.0E-70 T 14-10-2018 Amir_4513 709557654e97a601208073f13162d9df 382 Pfam PF00672 HAMP domain 86 134 6.9E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_4513 709557654e97a601208073f13162d9df 382 Gene3D G3DSA:1.10.287.130 89 204 7.2E-26 T 14-10-2018 Amir_4513 709557654e97a601208073f13162d9df 382 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 360 2.4E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4513 709557654e97a601208073f13162d9df 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 339 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4513 709557654e97a601208073f13162d9df 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 358 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4513 709557654e97a601208073f13162d9df 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 299 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4513 709557654e97a601208073f13162d9df 382 SMART SM00304 85 138 5.0E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_4513 709557654e97a601208073f13162d9df 382 SUPERFAMILY SSF47384 122 204 7.26E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_4513 709557654e97a601208073f13162d9df 382 SMART SM00387 245 361 4.1E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4513 709557654e97a601208073f13162d9df 382 Gene3D G3DSA:3.30.565.10 205 364 1.5E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4513 709557654e97a601208073f13162d9df 382 SUPERFAMILY SSF158472 86 135 9.68E-9 T 14-10-2018 Amir_4513 709557654e97a601208073f13162d9df 382 Pfam PF00512 His Kinase A (phospho-acceptor) domain 140 203 8.8E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_4513 709557654e97a601208073f13162d9df 382 SUPERFAMILY SSF55874 204 361 2.49E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4513 709557654e97a601208073f13162d9df 382 SMART SM00388 139 203 2.3E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_0465 18bd362b3390aff4669df1215b1f15ab 467 SUPERFAMILY SSF53223 86 235 4.75E-56 T 14-10-2018 Amir_0465 18bd362b3390aff4669df1215b1f15ab 467 Gene3D G3DSA:3.40.50.720 235 466 1.1E-70 T 14-10-2018 Amir_0465 18bd362b3390aff4669df1215b1f15ab 467 PIRSF PIRSF000106 27 467 3.0E-80 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Amir_0465 18bd362b3390aff4669df1215b1f15ab 467 PRINTS PR00072 Malic enzyme signature 264 280 5.5E-6 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Amir_0465 18bd362b3390aff4669df1215b1f15ab 467 PRINTS PR00072 Malic enzyme signature 233 249 5.5E-6 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Amir_0465 18bd362b3390aff4669df1215b1f15ab 467 PRINTS PR00072 Malic enzyme signature 154 176 5.5E-6 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Amir_0465 18bd362b3390aff4669df1215b1f15ab 467 SMART SM00919 237 459 3.9E-102 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Amir_0465 18bd362b3390aff4669df1215b1f15ab 467 Pfam PF00390 Malic enzyme, N-terminal domain 93 191 2.6E-24 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Amir_0465 18bd362b3390aff4669df1215b1f15ab 467 Gene3D G3DSA:3.40.50.10380 78 234 3.8E-71 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Amir_0465 18bd362b3390aff4669df1215b1f15ab 467 Pfam PF03949 Malic enzyme, NAD binding domain 239 458 3.5E-22 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Amir_0465 18bd362b3390aff4669df1215b1f15ab 467 SMART SM01274 92 225 2.6E-84 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Amir_0465 18bd362b3390aff4669df1215b1f15ab 467 SUPERFAMILY SSF51735 237 465 4.61E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4664 043d1b6ea3a5c534d6a2120269e5b984 285 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 49 242 3.8E-17 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_4664 043d1b6ea3a5c534d6a2120269e5b984 285 SUPERFAMILY SSF52266 45 257 2.83E-49 T 14-10-2018 Amir_4664 043d1b6ea3a5c534d6a2120269e5b984 285 Gene3D G3DSA:3.40.50.1110 44 267 2.6E-63 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 893 943 5.4 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 1065 1093 0.12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 Gene3D G3DSA:2.120.10.90 842 1125 9.0E-47 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 Gene3D G3DSA:3.30.1360.40 567 667 5.5E-158 T 14-10-2018 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 SUPERFAMILY SSF56719 401 821 4.19E-129 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 SUPERFAMILY SSF51294 88 404 3.66E-22 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 383 405 1.1E-4 T 14-10-2018 IPR030934 Intein C-terminal splicing region Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 401 799 3.6E-120 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 47 88 7.8E-13 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 SMART SM00305 364 410 4.5E-6 T 14-10-2018 IPR003586 Hint domain C-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 Gene3D G3DSA:1.10.268.10 704 792 5.5E-158 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 SUPERFAMILY SSF101904 841 1107 2.49E-41 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 SMART SM00434 382 799 5.4E-172 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 Gene3D G3DSA:2.170.16.10 91 189 5.7E-9 T 14-10-2018 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 PRINTS PR00379 Intein signature 284 296 1.3E-6 T 14-10-2018 IPR006142 Intein GO:0016539 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 PRINTS PR00379 Intein signature 197 209 1.3E-6 T 14-10-2018 IPR006142 Intein GO:0016539 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 PRINTS PR00379 Intein signature 399 408 1.3E-6 T 14-10-2018 IPR006142 Intein GO:0016539 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 PRINTS PR00379 Intein signature 142 155 1.3E-6 T 14-10-2018 IPR006142 Intein GO:0016539 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 PRINTS PR00379 Intein signature 310 325 1.3E-6 T 14-10-2018 IPR006142 Intein GO:0016539 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 SMART SM00306 86 184 2.3E-4 T 14-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 SUPERFAMILY SSF56719 22 88 1.12E-21 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 Gene3D G3DSA:3.90.199.10 401 820 5.5E-158 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Amir_2281 12ba2684a4186ac7a1524a1af791349e 1143 Gene3D G3DSA:3.90.199.10 21 90 4.6E-23 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Amir_6205 ca8ac275618e9adae6e0cdf3e55344d4 378 Pfam PF00144 Beta-lactamase 57 344 4.0E-60 T 14-10-2018 IPR001466 Beta-lactamase-related Amir_6205 ca8ac275618e9adae6e0cdf3e55344d4 378 Gene3D G3DSA:3.40.710.10 40 363 1.3E-102 T 14-10-2018 Amir_6205 ca8ac275618e9adae6e0cdf3e55344d4 378 SUPERFAMILY SSF56601 45 342 2.47E-74 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_6100 6f7dd0bbbef4f0b0857c462daa6da5d5 134 Gene3D G3DSA:2.30.110.10 4 133 4.7E-26 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_6100 6f7dd0bbbef4f0b0857c462daa6da5d5 134 SUPERFAMILY SSF50475 7 130 3.57E-17 T 14-10-2018 Amir_6100 6f7dd0bbbef4f0b0857c462daa6da5d5 134 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 12 121 3.1E-22 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related Amir_2882 8170ea27ff35a52b3930018919eb2077 198 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 3 192 3.6E-42 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Amir_2882 8170ea27ff35a52b3930018919eb2077 198 Gene3D G3DSA:3.20.20.70 1 197 4.9E-62 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_2882 8170ea27ff35a52b3930018919eb2077 198 SUPERFAMILY SSF51366 1 195 1.1E-49 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Amir_2882 8170ea27ff35a52b3930018919eb2077 198 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 198 33.335 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Amir_1727 86bdf3b40bf8c4280cbff5b461eda789 200 Gene3D G3DSA:3.40.470.10 21 185 5.4E-57 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amir_1727 86bdf3b40bf8c4280cbff5b461eda789 200 Pfam PF03167 Uracil DNA glycosylase superfamily 24 179 2.4E-19 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amir_1727 86bdf3b40bf8c4280cbff5b461eda789 200 SUPERFAMILY SSF52141 20 180 8.72E-40 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amir_2850 f7eefe841a690244c27dc866cdc88b9f 690 Gene3D G3DSA:3.30.420.40 4 97 1.2E-5 T 14-10-2018 Amir_2850 f7eefe841a690244c27dc866cdc88b9f 690 SUPERFAMILY SSF53067 8 70 1.3E-5 T 14-10-2018 Amir_2850 f7eefe841a690244c27dc866cdc88b9f 690 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 10 188 4.8E-45 T 14-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Amir_2850 f7eefe841a690244c27dc866cdc88b9f 690 Pfam PF01968 Hydantoinase/oxoprolinase 209 497 2.4E-78 T 14-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Amir_7090 fa3e9ca6c0f46cd515d992c8dea1bb0b 438 Pfam PF00155 Aminotransferase class I and II 73 405 3.0E-34 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_7090 fa3e9ca6c0f46cd515d992c8dea1bb0b 438 Gene3D G3DSA:3.40.640.10 81 303 1.9E-132 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_7090 fa3e9ca6c0f46cd515d992c8dea1bb0b 438 Gene3D G3DSA:3.90.1150.10 34 409 1.9E-132 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_7090 fa3e9ca6c0f46cd515d992c8dea1bb0b 438 SUPERFAMILY SSF53383 21 411 4.81E-107 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_4149 612520ad48bf6f1c3f7656b11d6e03e2 320 Pfam PF17210 SdrD B-like domain 62 174 1.7E-13 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_4149 612520ad48bf6f1c3f7656b11d6e03e2 320 SUPERFAMILY SSF50370 184 319 1.41E-21 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_4149 612520ad48bf6f1c3f7656b11d6e03e2 320 Gene3D G3DSA:2.80.10.50 183 319 7.6E-20 T 14-10-2018 Amir_4149 612520ad48bf6f1c3f7656b11d6e03e2 320 Gene3D G3DSA:2.60.40.10 58 182 1.6E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_4149 612520ad48bf6f1c3f7656b11d6e03e2 320 SUPERFAMILY SSF117074 53 130 5.49E-12 T 14-10-2018 Amir_4149 612520ad48bf6f1c3f7656b11d6e03e2 320 SMART SM00458 178 320 4.9E-5 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4149 612520ad48bf6f1c3f7656b11d6e03e2 320 Pfam PF00652 Ricin-type beta-trefoil lectin domain 183 274 4.9E-9 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_0477 3e1b904ccd24c70277767d32491a1ba7 332 Gene3D G3DSA:3.30.360.10 123 323 1.2E-56 T 14-10-2018 Amir_0477 3e1b904ccd24c70277767d32491a1ba7 332 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 120 8.9E-26 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amir_0477 3e1b904ccd24c70277767d32491a1ba7 332 Gene3D G3DSA:3.40.50.720 1 122 5.8E-41 T 14-10-2018 Amir_0477 3e1b904ccd24c70277767d32491a1ba7 332 SUPERFAMILY SSF55347 129 287 8.01E-38 T 14-10-2018 Amir_0477 3e1b904ccd24c70277767d32491a1ba7 332 SUPERFAMILY SSF51735 4 157 3.76E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2976 ef1d91daf64f8a7e9f2cc3567b5a4b8c 162 SUPERFAMILY SSF55811 15 142 3.52E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_2976 ef1d91daf64f8a7e9f2cc3567b5a4b8c 162 ProSitePatterns PS00893 Nudix box signature. 51 72 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_2976 ef1d91daf64f8a7e9f2cc3567b5a4b8c 162 Gene3D G3DSA:3.90.79.10 1 149 3.0E-39 T 14-10-2018 Amir_2976 ef1d91daf64f8a7e9f2cc3567b5a4b8c 162 Pfam PF00293 NUDIX domain 23 134 2.2E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_4795 5c1690af1cff73e12b9cb16b183570ad 297 SUPERFAMILY SSF51735 1 284 4.27E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4795 5c1690af1cff73e12b9cb16b183570ad 297 Gene3D G3DSA:3.40.50.720 1 262 9.7E-38 T 14-10-2018 Amir_4795 5c1690af1cff73e12b9cb16b183570ad 297 Pfam PF13460 NAD(P)H-binding 7 110 4.5E-10 T 14-10-2018 IPR016040 NAD(P)-binding domain Amir_0002 752e23af87c26380c5f3c230b7d055c9 378 PIRSF PIRSF000804 1 377 1.5E-99 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Amir_0002 752e23af87c26380c5f3c230b7d055c9 378 Gene3D G3DSA:3.10.150.10 254 378 4.6E-44 T 14-10-2018 Amir_0002 752e23af87c26380c5f3c230b7d055c9 378 SUPERFAMILY SSF55979 1 123 1.43E-22 T 14-10-2018 Amir_0002 752e23af87c26380c5f3c230b7d055c9 378 Gene3D G3DSA:3.10.150.10 1 126 2.2E-42 T 14-10-2018 Amir_0002 752e23af87c26380c5f3c230b7d055c9 378 SUPERFAMILY SSF55979 251 376 9.07E-30 T 14-10-2018 Amir_0002 752e23af87c26380c5f3c230b7d055c9 378 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 251 361 2.7E-32 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Amir_0002 752e23af87c26380c5f3c230b7d055c9 378 SMART SM00480 17 372 1.1E-118 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Amir_0002 752e23af87c26380c5f3c230b7d055c9 378 Gene3D G3DSA:3.10.150.10 129 253 9.2E-33 T 14-10-2018 Amir_0002 752e23af87c26380c5f3c230b7d055c9 378 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 376 1.1E-98 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Amir_0002 752e23af87c26380c5f3c230b7d055c9 378 Pfam PF02767 DNA polymerase III beta subunit, central domain 132 249 3.4E-30 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Amir_0002 752e23af87c26380c5f3c230b7d055c9 378 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 123 5.0E-32 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Amir_0002 752e23af87c26380c5f3c230b7d055c9 378 SUPERFAMILY SSF55979 132 250 1.18E-21 T 14-10-2018 Amir_0823 a745fec62f159f7bbf29bca92a15e4e6 492 SUPERFAMILY SSF50998 146 485 7.2E-12 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Amir_0823 a745fec62f159f7bbf29bca92a15e4e6 492 Pfam PF13360 PQQ-like domain 149 253 1.9E-4 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Amir_6759 a1655b3f7b2e9c858ec5ae8fdd57fd30 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 6.4E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6759 a1655b3f7b2e9c858ec5ae8fdd57fd30 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 6.4E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6759 a1655b3f7b2e9c858ec5ae8fdd57fd30 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 6.4E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6759 a1655b3f7b2e9c858ec5ae8fdd57fd30 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 6.4E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6759 a1655b3f7b2e9c858ec5ae8fdd57fd30 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 6.4E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6759 a1655b3f7b2e9c858ec5ae8fdd57fd30 243 Pfam PF00106 short chain dehydrogenase 5 186 1.3E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6759 a1655b3f7b2e9c858ec5ae8fdd57fd30 243 Gene3D G3DSA:3.40.50.720 1 243 7.6E-61 T 14-10-2018 Amir_6759 a1655b3f7b2e9c858ec5ae8fdd57fd30 243 SUPERFAMILY SSF51735 3 231 2.93E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0903 092185491d4ef7e5b55e44a9f4e351ad 64 Pfam PF04149 Domain of unknown function (DUF397) 9 61 7.5E-18 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_2837 61a9acac29731fbbdc197014d71ad970 348 SUPERFAMILY SSF75005 14 311 1.1E-67 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_2837 61a9acac29731fbbdc197014d71ad970 348 Gene3D G3DSA:2.115.10.20 23 323 8.4E-91 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_2837 61a9acac29731fbbdc197014d71ad970 348 Pfam PF04616 Glycosyl hydrolases family 43 27 311 4.2E-45 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Amir_4905 0f605d501f52b302c618b4af8f4b411b 349 Gene3D G3DSA:1.10.3470.10 18 347 1.2E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_4905 0f605d501f52b302c618b4af8f4b411b 349 SUPERFAMILY SSF81345 15 343 1.02E-59 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_4905 0f605d501f52b302c618b4af8f4b411b 349 Pfam PF01032 FecCD transport family 35 343 4.2E-75 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_6754 916934591b2b81e8900871ee0359d3a5 517 SUPERFAMILY SSF56801 15 515 2.09E-151 T 14-10-2018 Amir_6754 916934591b2b81e8900871ee0359d3a5 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 430 505 3.4E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_6754 916934591b2b81e8900871ee0359d3a5 517 Gene3D G3DSA:3.30.300.30 417 516 5.3E-30 T 14-10-2018 Amir_6754 916934591b2b81e8900871ee0359d3a5 517 Gene3D G3DSA:3.40.50.12780 1 416 4.0E-136 T 14-10-2018 Amir_6754 916934591b2b81e8900871ee0359d3a5 517 Pfam PF00501 AMP-binding enzyme 27 421 2.3E-110 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_6754 916934591b2b81e8900871ee0359d3a5 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_2670 ed7dd2f1f8b3bd0aa0e3713975f9ee10 166 Pfam PF04213 Htaa 16 161 4.7E-21 T 14-10-2018 IPR007331 Htaa Amir_3741 f1fc4f293f1fdfab853f691952c33e0f 339 SMART SM00331 151 339 1.7E-10 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3741 f1fc4f293f1fdfab853f691952c33e0f 339 SUPERFAMILY SSF55874 30 137 8.8E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3741 f1fc4f293f1fdfab853f691952c33e0f 339 Gene3D G3DSA:3.60.40.10 153 338 6.4E-42 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3741 f1fc4f293f1fdfab853f691952c33e0f 339 Pfam PF13581 Histidine kinase-like ATPase domain 22 137 1.7E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_3741 f1fc4f293f1fdfab853f691952c33e0f 339 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 177 319 8.2E-15 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3741 f1fc4f293f1fdfab853f691952c33e0f 339 Gene3D G3DSA:3.30.565.10 13 144 4.7E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3741 f1fc4f293f1fdfab853f691952c33e0f 339 SUPERFAMILY SSF81606 158 337 4.19E-11 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_5674 33b99e8097465bca735e29ce972adcec 838 Pfam PF02687 FtsX-like permease family 286 381 3.2E-16 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amir_5674 33b99e8097465bca735e29ce972adcec 838 Pfam PF02687 FtsX-like permease family 739 830 7.9E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amir_5674 33b99e8097465bca735e29ce972adcec 838 Pfam PF12704 MacB-like periplasmic core domain 486 680 3.1E-9 T 14-10-2018 IPR025857 MacB-like periplasmic core domain Amir_5674 33b99e8097465bca735e29ce972adcec 838 Pfam PF12704 MacB-like periplasmic core domain 17 225 9.7E-15 T 14-10-2018 IPR025857 MacB-like periplasmic core domain Amir_6929 4d797e747f2e55903e532fccf6eca428 211 Pfam PF01078 Magnesium chelatase, subunit ChlI 6 48 7.2E-5 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain Amir_6929 4d797e747f2e55903e532fccf6eca428 211 SUPERFAMILY SSF52540 22 179 7.16E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6929 4d797e747f2e55903e532fccf6eca428 211 Gene3D G3DSA:3.40.50.300 51 211 2.8E-43 T 14-10-2018 Amir_6929 4d797e747f2e55903e532fccf6eca428 211 Gene3D G3DSA:3.40.50.300 6 50 4.8E-7 T 14-10-2018 Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 553 851 6.8E-103 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 Gene3D G3DSA:3.40.50.720 909 1418 2.7E-146 T 14-10-2018 Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 Gene3D G3DSA:3.40.366.10 551 854 2.3E-151 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 184 200 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 Gene3D G3DSA:3.30.70.3290 465 898 2.3E-151 T 14-10-2018 Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 Gene3D G3DSA:1.10.1200.10 1432 1524 1.4E-31 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 SMART SM00825 Beta-ketoacyl synthase 37 447 1.9E-207 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 Gene3D G3DSA:3.40.47.10 26 464 2.9E-182 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 SMART SM01294 1450 1517 7.0E-7 T 14-10-2018 Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 SUPERFAMILY SSF51735 955 1160 1.26E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 SUPERFAMILY SSF55048 677 742 7.59E-12 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 SUPERFAMILY SSF51735 1170 1393 3.86E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 35 271 1.7E-82 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 SUPERFAMILY SSF53901 32 391 6.98E-104 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 Pfam PF00698 Acyl transferase domain 551 868 3.0E-79 T 14-10-2018 IPR014043 Acyl transferase Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 397 509 1.2E-16 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1172 1346 4.8E-38 T 14-10-2018 Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 SUPERFAMILY SSF47336 1442 1527 3.8E-21 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 SMART SM00823 Phosphopantetheine attachment site 1449 1521 1.2E-27 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 279 394 5.7E-43 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 Pfam PF08990 Erythronolide synthase docking 3 28 1.3E-10 T 14-10-2018 IPR015083 Polyketide synthase, docking domain GO:0016740|GO:0048037 Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 SUPERFAMILY SSF101173 3 35 6.93E-6 T 14-10-2018 IPR036299 Polyketide synthase, docking domain superfmaily Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 SUPERFAMILY SSF52151 549 839 5.23E-63 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 Pfam PF08659 KR domain 1172 1344 1.7E-48 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2683 9d244aebf13e107bcd50f4d8850e6955 1601 Pfam PF00550 Phosphopantetheine attachment site 1451 1517 4.4E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4166 076856349856214d152910d9c1509b06 306 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 132 284 1.3E-53 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Amir_4166 076856349856214d152910d9c1509b06 306 SUPERFAMILY SSF51735 95 285 1.16E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4166 076856349856214d152910d9c1509b06 306 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Amir_4166 076856349856214d152910d9c1509b06 306 SUPERFAMILY SSF52283 1 114 4.73E-25 T 14-10-2018 Amir_4166 076856349856214d152910d9c1509b06 306 Gene3D G3DSA:3.40.50.720 92 282 3.6E-97 T 14-10-2018 Amir_4166 076856349856214d152910d9c1509b06 306 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 34 304 1.5E-24 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Amir_4166 076856349856214d152910d9c1509b06 306 Gene3D G3DSA:3.40.50.720 3 305 3.6E-97 T 14-10-2018 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 SUPERFAMILY SSF56784 340 631 1.03E-49 T 14-10-2018 IPR036412 HAD-like superfamily Amir_3097 3665217c06e6ce97df0ef97291b88175 670 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 94 633 2.1E-166 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 344 350 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 SUPERFAMILY SSF81665 96 336 9.42E-12 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 Pfam PF00702 haloacid dehalogenase-like hydrolase 340 545 8.5E-39 T 14-10-2018 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 118 608 5.0E-74 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 SUPERFAMILY SSF81653 145 243 5.23E-22 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 Gene3D G3DSA:2.70.150.20 137 248 1.0E-29 T 14-10-2018 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 Gene3D G3DSA:3.40.1110.10 353 464 8.6E-84 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 Gene3D G3DSA:3.40.50.1000 323 583 8.6E-84 T 14-10-2018 IPR023214 HAD superfamily Amir_3097 3665217c06e6ce97df0ef97291b88175 670 PRINTS PR00941 Cadmium-transporting ATPase signature 209 225 9.7E-7 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 PRINTS PR00941 Cadmium-transporting ATPase signature 148 164 9.7E-7 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 PRINTS PR00941 Cadmium-transporting ATPase signature 228 242 9.7E-7 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 PRINTS PR00941 Cadmium-transporting ATPase signature 128 148 9.7E-7 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 Pfam PF00122 E1-E2 ATPase 144 322 1.5E-43 T 14-10-2018 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 479 489 5.4E-27 T 14-10-2018 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 531 550 5.4E-27 T 14-10-2018 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 555 567 5.4E-27 T 14-10-2018 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 342 356 5.4E-27 T 14-10-2018 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 457 468 5.4E-27 T 14-10-2018 Amir_3097 3665217c06e6ce97df0ef97291b88175 670 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 193 207 5.4E-27 T 14-10-2018 Amir_3163 f528655185c49899de98fd8a3aedb8de 241 Gene3D G3DSA:3.40.50.1110 35 236 2.5E-63 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_3163 f528655185c49899de98fd8a3aedb8de 241 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 44 216 1.0E-21 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_3163 f528655185c49899de98fd8a3aedb8de 241 SUPERFAMILY SSF52266 33 226 2.4E-36 T 14-10-2018 Amir_0549 a890c1573b34f08908bd6b738feebe15 275 PIRSF PIRSF016184 1 273 1.6E-60 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Amir_0549 a890c1573b34f08908bd6b738feebe15 275 Pfam PF02567 Phenazine biosynthesis-like protein 7 271 3.6E-62 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Amir_0549 a890c1573b34f08908bd6b738feebe15 275 Gene3D G3DSA:3.10.310.10 9 112 2.9E-67 T 14-10-2018 Amir_0549 a890c1573b34f08908bd6b738feebe15 275 Gene3D G3DSA:3.10.310.10 113 266 2.9E-67 T 14-10-2018 Amir_0549 a890c1573b34f08908bd6b738feebe15 275 SUPERFAMILY SSF54506 4 270 2.62E-57 T 14-10-2018 Amir_0549 a890c1573b34f08908bd6b738feebe15 275 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 269 5.0E-45 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Amir_5885 f6965ee3cf7b6e716cf175c6a46f0328 285 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 44 284 3.7E-89 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_5885 f6965ee3cf7b6e716cf175c6a46f0328 285 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 202 220 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_5885 f6965ee3cf7b6e716cf175c6a46f0328 285 SUPERFAMILY SSF55920 5 284 4.32E-87 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Amir_5885 f6965ee3cf7b6e716cf175c6a46f0328 285 Hamap MF_01974 Methionine aminopeptidase [map]. 39 285 39.26 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_5885 f6965ee3cf7b6e716cf175c6a46f0328 285 PRINTS PR00599 Methionine aminopeptidase-1 signature 126 142 1.5E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_5885 f6965ee3cf7b6e716cf175c6a46f0328 285 PRINTS PR00599 Methionine aminopeptidase-1 signature 227 239 1.5E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_5885 f6965ee3cf7b6e716cf175c6a46f0328 285 PRINTS PR00599 Methionine aminopeptidase-1 signature 104 117 1.5E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_5885 f6965ee3cf7b6e716cf175c6a46f0328 285 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 1.5E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_5885 f6965ee3cf7b6e716cf175c6a46f0328 285 Gene3D G3DSA:3.90.230.10 3 285 3.9E-115 T 14-10-2018 Amir_5885 f6965ee3cf7b6e716cf175c6a46f0328 285 Pfam PF00557 Metallopeptidase family M24 48 276 6.0E-51 T 14-10-2018 IPR000994 Peptidase M24 Amir_0390 46b414b48b396fe61635dbd137f5ee11 293 Gene3D G3DSA:3.40.190.290 91 292 7.9E-40 T 14-10-2018 Amir_0390 46b414b48b396fe61635dbd137f5ee11 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.4E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_0390 46b414b48b396fe61635dbd137f5ee11 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_0390 46b414b48b396fe61635dbd137f5ee11 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_0390 46b414b48b396fe61635dbd137f5ee11 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_0390 46b414b48b396fe61635dbd137f5ee11 293 SUPERFAMILY SSF53850 91 291 4.89E-36 T 14-10-2018 Amir_0390 46b414b48b396fe61635dbd137f5ee11 293 Pfam PF03466 LysR substrate binding domain 107 291 5.5E-37 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_0390 46b414b48b396fe61635dbd137f5ee11 293 Gene3D G3DSA:1.10.10.10 1 84 3.3E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0390 46b414b48b396fe61635dbd137f5ee11 293 SUPERFAMILY SSF46785 2 86 2.45E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2538 10855b8198622c1aa775ee208cebcd4f 154 Gene3D G3DSA:1.10.10.10 3 151 6.8E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2538 10855b8198622c1aa775ee208cebcd4f 154 SUPERFAMILY SSF46785 4 151 9.49E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2538 10855b8198622c1aa775ee208cebcd4f 154 Pfam PF01047 MarR family 48 100 3.2E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2538 10855b8198622c1aa775ee208cebcd4f 154 SMART SM00347 32 137 2.0E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2538 10855b8198622c1aa775ee208cebcd4f 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 1.2E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2538 10855b8198622c1aa775ee208cebcd4f 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 1.2E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2538 10855b8198622c1aa775ee208cebcd4f 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 147 1.2E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0094 690260fb786cd9bdff434d2269c5974b 342 Gene3D G3DSA:3.40.50.10140 14 152 6.2E-18 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily Amir_0094 690260fb786cd9bdff434d2269c5974b 342 SMART SM00255 21 175 0.002 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 Amir_0094 690260fb786cd9bdff434d2269c5974b 342 Pfam PF13676 TIR domain 24 121 1.1E-11 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 Amir_0094 690260fb786cd9bdff434d2269c5974b 342 SUPERFAMILY SSF52200 21 126 8.5E-13 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily Amir_1367 94ca05a7e8b9cac6ab8a5a767ca27274 311 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 46 258 2.7E-45 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_1367 94ca05a7e8b9cac6ab8a5a767ca27274 311 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 37 111 1.3E-4 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_1367 94ca05a7e8b9cac6ab8a5a767ca27274 311 SUPERFAMILY SSF49503 124 281 1.33E-35 T 14-10-2018 IPR008972 Cupredoxin Amir_1367 94ca05a7e8b9cac6ab8a5a767ca27274 311 PRINTS PR01166 Cytochrome c oxidase subunit II signature 127 146 9.2E-6 T 14-10-2018 Amir_1367 94ca05a7e8b9cac6ab8a5a767ca27274 311 PRINTS PR01166 Cytochrome c oxidase subunit II signature 105 125 9.2E-6 T 14-10-2018 Amir_1367 94ca05a7e8b9cac6ab8a5a767ca27274 311 PRINTS PR01166 Cytochrome c oxidase subunit II signature 230 247 9.2E-6 T 14-10-2018 Amir_1367 94ca05a7e8b9cac6ab8a5a767ca27274 311 SUPERFAMILY SSF81464 24 121 6.05E-19 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_1367 94ca05a7e8b9cac6ab8a5a767ca27274 311 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 187 241 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_1367 94ca05a7e8b9cac6ab8a5a767ca27274 311 Gene3D G3DSA:1.10.287.90 44 120 3.0E-13 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_1367 94ca05a7e8b9cac6ab8a5a767ca27274 311 Gene3D G3DSA:2.60.40.2600 127 303 1.1E-38 T 14-10-2018 Amir_1367 94ca05a7e8b9cac6ab8a5a767ca27274 311 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 132 247 2.4E-17 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_5331 87d89c75d6b4db3caae16199baf28c61 292 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 75 2.6E-11 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_5331 87d89c75d6b4db3caae16199baf28c61 292 SUPERFAMILY SSF51735 1 276 1.44E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5331 87d89c75d6b4db3caae16199baf28c61 292 Gene3D G3DSA:3.40.50.720 2 272 5.1E-36 T 14-10-2018 Amir_5295 3d4b355c0f1566da0d97390702ff89ef 189 Gene3D G3DSA:1.10.357.10 4 189 2.5E-16 T 14-10-2018 Amir_5295 3d4b355c0f1566da0d97390702ff89ef 189 SUPERFAMILY SSF46689 7 75 2.57E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5295 3d4b355c0f1566da0d97390702ff89ef 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 57 1.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4190 d429875c8da419bbf1e59ff4119a598d 158 SMART SM00347 25 127 7.5E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4190 d429875c8da419bbf1e59ff4119a598d 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 9.0E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4190 d429875c8da419bbf1e59ff4119a598d 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 9.0E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4190 d429875c8da419bbf1e59ff4119a598d 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 9.0E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4190 d429875c8da419bbf1e59ff4119a598d 158 Gene3D G3DSA:1.10.10.10 7 142 1.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4190 d429875c8da419bbf1e59ff4119a598d 158 Pfam PF13463 Winged helix DNA-binding domain 36 100 8.2E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4190 d429875c8da419bbf1e59ff4119a598d 158 SUPERFAMILY SSF46785 19 141 3.1E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4954 a5120591cab18918ad167e85d183c24c 305 SUPERFAMILY SSF103481 40 141 6.28E-13 T 14-10-2018 Amir_4954 a5120591cab18918ad167e85d183c24c 305 Pfam PF00892 EamA-like transporter family 12 138 6.5E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amir_4954 a5120591cab18918ad167e85d183c24c 305 SUPERFAMILY SSF103481 186 286 5.1E-9 T 14-10-2018 Amir_3933 947981da8130ec72c34573bb592392b5 579 Gene3D G3DSA:3.30.420.350 108 335 1.2E-67 T 14-10-2018 Amir_3933 947981da8130ec72c34573bb592392b5 579 Pfam PF02543 Carbamoyltransferase N-terminus 3 76 7.7E-9 T 14-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 Amir_3933 947981da8130ec72c34573bb592392b5 579 Pfam PF02543 Carbamoyltransferase N-terminus 101 341 1.4E-30 T 14-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 Amir_3933 947981da8130ec72c34573bb592392b5 579 Gene3D G3DSA:3.90.870.20 358 561 1.7E-78 T 14-10-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily Amir_3933 947981da8130ec72c34573bb592392b5 579 SUPERFAMILY SSF53067 3 348 1.51E-14 T 14-10-2018 Amir_3933 947981da8130ec72c34573bb592392b5 579 Pfam PF16861 Carbamoyltransferase C-terminus 393 562 3.3E-67 T 14-10-2018 IPR031730 Carbamoyltransferase, C-terminal Amir_3933 947981da8130ec72c34573bb592392b5 579 Gene3D G3DSA:3.30.420.40 10 342 1.2E-67 T 14-10-2018 Amir_1510 7ddfc809f302a7814f889b21858af077 253 Gene3D G3DSA:3.30.420.40 111 250 2.3E-37 T 14-10-2018 Amir_1510 7ddfc809f302a7814f889b21858af077 253 Gene3D G3DSA:3.30.420.40 4 110 5.0E-21 T 14-10-2018 Amir_1510 7ddfc809f302a7814f889b21858af077 253 SUPERFAMILY SSF53067 7 248 6.74E-34 T 14-10-2018 Amir_1510 7ddfc809f302a7814f889b21858af077 253 Pfam PF00480 ROK family 8 166 1.7E-15 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_2410 75149dd0a4b2f035404145aa39190629 343 Pfam PF07730 Histidine kinase 154 217 2.0E-10 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_2410 75149dd0a4b2f035404145aa39190629 343 SUPERFAMILY SSF55874 248 340 2.48E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2410 75149dd0a4b2f035404145aa39190629 343 Gene3D G3DSA:3.30.565.10 220 341 6.4E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2933 5abeb8fcf639f4189bd6559955d7344f 689 SUPERFAMILY SSF52540 423 661 5.09E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2933 5abeb8fcf639f4189bd6559955d7344f 689 Gene3D G3DSA:3.40.50.300 419 613 2.1E-38 T 14-10-2018 Amir_2933 5abeb8fcf639f4189bd6559955d7344f 689 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 473 597 6.9E-23 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amir_2933 5abeb8fcf639f4189bd6559955d7344f 689 SMART SM00382 468 600 5.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1237 83fb2af9cf17cd94f8f0aff8fa40f49a 231 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 42 206 3.0E-39 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Amir_1237 83fb2af9cf17cd94f8f0aff8fa40f49a 231 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 24 230 1.1E-55 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Amir_1237 83fb2af9cf17cd94f8f0aff8fa40f49a 231 PIRSF PIRSF000857 3 231 3.5E-83 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Amir_1237 83fb2af9cf17cd94f8f0aff8fa40f49a 231 SUPERFAMILY SSF52402 16 195 4.49E-37 T 14-10-2018 Amir_1237 83fb2af9cf17cd94f8f0aff8fa40f49a 231 Gene3D G3DSA:3.40.50.620 4 231 1.2E-60 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_5306 42ca74d8238dec62228aea3a739c3726 329 SUPERFAMILY SSF50129 2 169 1.52E-54 T 14-10-2018 IPR011032 GroES-like superfamily Amir_5306 42ca74d8238dec62228aea3a739c3726 329 SMART SM00829 8 327 6.4E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_5306 42ca74d8238dec62228aea3a739c3726 329 Gene3D G3DSA:3.40.50.720 148 276 1.1E-97 T 14-10-2018 Amir_5306 42ca74d8238dec62228aea3a739c3726 329 SUPERFAMILY SSF51735 138 299 9.28E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5306 42ca74d8238dec62228aea3a739c3726 329 Gene3D G3DSA:3.90.180.10 14 308 1.1E-97 T 14-10-2018 Amir_5306 42ca74d8238dec62228aea3a739c3726 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 130 7.3E-34 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_5306 42ca74d8238dec62228aea3a739c3726 329 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amir_5306 42ca74d8238dec62228aea3a739c3726 329 Pfam PF00107 Zinc-binding dehydrogenase 171 290 2.2E-14 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_2160 3377f28928029a217c50b35b5fc46b1a 334 Pfam PF02470 MlaD protein 37 111 6.8E-13 T 14-10-2018 IPR003399 Mce/MlaD Amir_2160 3377f28928029a217c50b35b5fc46b1a 334 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 13 300 1.4E-59 T 14-10-2018 IPR005693 Virulence factor Mce protein Amir_2806 c1dc49193a2c5bd7c5e85d1e2e578d92 239 SMART SM01012 166 226 0.0065 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_2806 c1dc49193a2c5bd7c5e85d1e2e578d92 239 PIRSF PIRSF036625 3 237 1.4E-33 T 14-10-2018 IPR012074 GAF-ANTAR transcription anti-termination regulator, putative Amir_2806 c1dc49193a2c5bd7c5e85d1e2e578d92 239 Pfam PF13185 GAF domain 20 158 1.5E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2806 c1dc49193a2c5bd7c5e85d1e2e578d92 239 Gene3D G3DSA:3.30.450.40 1 167 5.2E-12 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_2806 c1dc49193a2c5bd7c5e85d1e2e578d92 239 SUPERFAMILY SSF55781 28 161 4.49E-11 T 14-10-2018 Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 PRINTS PR00959 Mevalonate kinase family signature 122 144 3.0E-39 T 14-10-2018 Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 PRINTS PR00959 Mevalonate kinase family signature 339 356 3.0E-39 T 14-10-2018 Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 PRINTS PR00959 Mevalonate kinase family signature 172 191 3.0E-39 T 14-10-2018 Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 PRINTS PR00959 Mevalonate kinase family signature 27 51 3.0E-39 T 14-10-2018 Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 ProSitePatterns PS00106 Galactokinase signature. 29 40 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 Pfam PF00288 GHMP kinases N terminal domain 117 190 3.2E-11 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 TIGRFAM TIGR00131 gal_kin: galactokinase 11 374 4.9E-82 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 PRINTS PR00473 Galactokinase signature 29 47 5.7E-25 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 PRINTS PR00473 Galactokinase signature 115 133 5.7E-25 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 PRINTS PR00473 Galactokinase signature 96 107 5.7E-25 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 PRINTS PR00473 Galactokinase signature 276 290 5.7E-25 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 Pfam PF08544 GHMP kinases C terminal 293 371 2.5E-10 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 PIRSF PIRSF000530 2 394 1.7E-112 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 Gene3D G3DSA:3.30.230.10 13 210 2.0E-119 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 SUPERFAMILY SSF55060 218 391 1.1E-47 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 Pfam PF10509 Galactokinase galactose-binding signature 12 60 4.8E-21 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 SUPERFAMILY SSF54211 7 212 2.2E-51 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_1464 c91339b49a0f857f55d6d0f514ae4763 394 Gene3D G3DSA:3.30.70.890 211 356 2.0E-119 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Amir_0960 7fceac339cf97676d3f614137e4ad4ed 670 Pfam PF02384 N-6 DNA Methylase 153 453 9.0E-59 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Amir_0960 7fceac339cf97676d3f614137e4ad4ed 670 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 176 192 9.4E-14 T 14-10-2018 Amir_0960 7fceac339cf97676d3f614137e4ad4ed 670 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 209 223 9.4E-14 T 14-10-2018 Amir_0960 7fceac339cf97676d3f614137e4ad4ed 670 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 281 293 9.4E-14 T 14-10-2018 Amir_0960 7fceac339cf97676d3f614137e4ad4ed 670 SUPERFAMILY SSF53335 8 668 1.57E-117 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_0960 7fceac339cf97676d3f614137e4ad4ed 670 Pfam PF12161 HsdM N-terminal domain 9 139 1.4E-20 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Amir_0960 7fceac339cf97676d3f614137e4ad4ed 670 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 284 290 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Amir_0960 7fceac339cf97676d3f614137e4ad4ed 670 Gene3D G3DSA:3.40.50.150 154 472 3.0E-95 T 14-10-2018 Amir_2828 c03fa33928fa0d02a9f18c42b096b278 305 Pfam PF05368 NmrA-like family 7 244 1.3E-41 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 Amir_2828 c03fa33928fa0d02a9f18c42b096b278 305 SUPERFAMILY SSF51735 6 269 7.11E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2828 c03fa33928fa0d02a9f18c42b096b278 305 Gene3D G3DSA:3.40.50.720 7 292 2.4E-65 T 14-10-2018 Amir_2828 c03fa33928fa0d02a9f18c42b096b278 305 Gene3D G3DSA:3.90.25.10 165 298 2.4E-65 T 14-10-2018 Amir_4903 a4df863ba60d03561df0c8d077bca268 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 80 9.1E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_4903 a4df863ba60d03561df0c8d077bca268 243 SMART SM00345 22 80 8.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_4903 a4df863ba60d03561df0c8d077bca268 243 SMART SM00895 90 216 8.5E-5 T 14-10-2018 IPR011711 GntR, C-terminal Amir_4903 a4df863ba60d03561df0c8d077bca268 243 SUPERFAMILY SSF46785 15 84 6.04E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4903 a4df863ba60d03561df0c8d077bca268 243 Gene3D G3DSA:1.10.10.10 15 81 2.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4903 a4df863ba60d03561df0c8d077bca268 243 Pfam PF07729 FCD domain 90 213 5.9E-13 T 14-10-2018 IPR011711 GntR, C-terminal Amir_4903 a4df863ba60d03561df0c8d077bca268 243 SUPERFAMILY SSF48008 86 215 6.02E-16 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_4903 a4df863ba60d03561df0c8d077bca268 243 Gene3D G3DSA:1.20.120.530 84 223 6.8E-16 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_1305 274222bd9b4e15f039d1e00212ec4bc0 122 SUPERFAMILY SSF49695 39 102 2.13E-6 T 14-10-2018 IPR011024 Gamma-crystallin-like Amir_1305 274222bd9b4e15f039d1e00212ec4bc0 122 Pfam PF03995 Peptidase inhibitor family I36 27 98 9.9E-16 T 14-10-2018 Amir_1305 274222bd9b4e15f039d1e00212ec4bc0 122 Gene3D G3DSA:2.60.20.10 39 122 1.3E-6 T 14-10-2018 Amir_1694 7dfe2eea6a6377a5caa0f7a2d50f4dab 133 Pfam PF02699 Preprotein translocase subunit 7 83 2.9E-20 T 14-10-2018 IPR003849 Preprotein translocase YajC Amir_1694 7dfe2eea6a6377a5caa0f7a2d50f4dab 133 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 10 86 2.0E-18 T 14-10-2018 IPR003849 Preprotein translocase YajC Amir_1694 7dfe2eea6a6377a5caa0f7a2d50f4dab 133 SMART SM01323 4 86 6.1E-27 T 14-10-2018 IPR003849 Preprotein translocase YajC Amir_6581 8983706444f305c9fdab7298973fa215 314 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 39 273 4.4E-50 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_6581 8983706444f305c9fdab7298973fa215 314 Pfam PF01416 tRNA pseudouridine synthase 183 280 2.6E-19 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_6581 8983706444f305c9fdab7298973fa215 314 Pfam PF01416 tRNA pseudouridine synthase 44 138 1.1E-5 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_6581 8983706444f305c9fdab7298973fa215 314 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 37 279 30.189 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_6581 8983706444f305c9fdab7298973fa215 314 Gene3D G3DSA:3.30.70.660 141 278 2.7E-35 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Amir_6581 8983706444f305c9fdab7298973fa215 314 SUPERFAMILY SSF55120 37 284 3.02E-71 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_6581 8983706444f305c9fdab7298973fa215 314 PIRSF PIRSF001430 36 296 5.9E-68 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_6581 8983706444f305c9fdab7298973fa215 314 Gene3D G3DSA:3.30.70.580 35 140 1.1E-34 T 14-10-2018 Amir_1948 b654fad0bb39962ff58ab5c20ef578f8 344 SMART SM00382 24 207 3.1E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1948 b654fad0bb39962ff58ab5c20ef578f8 344 Gene3D G3DSA:3.40.50.300 17 238 2.2E-64 T 14-10-2018 Amir_1948 b654fad0bb39962ff58ab5c20ef578f8 344 SUPERFAMILY SSF52540 7 232 1.29E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1948 b654fad0bb39962ff58ab5c20ef578f8 344 Pfam PF03459 TOBE domain 282 339 2.7E-9 T 14-10-2018 IPR005116 Transport-associated OB, type 1 Amir_1948 b654fad0bb39962ff58ab5c20ef578f8 344 Pfam PF00005 ABC transporter 19 158 2.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1948 b654fad0bb39962ff58ab5c20ef578f8 344 Gene3D G3DSA:2.40.50.140 244 339 2.7E-11 T 14-10-2018 Amir_1948 b654fad0bb39962ff58ab5c20ef578f8 344 SUPERFAMILY SSF50331 232 342 8.69E-16 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Amir_1948 b654fad0bb39962ff58ab5c20ef578f8 344 Gene3D G3DSA:2.40.50.100 267 337 2.7E-11 T 14-10-2018 Amir_1948 b654fad0bb39962ff58ab5c20ef578f8 344 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_2633 1ed6dfaa7d9cd5087b648dd927400579 425 Pfam PF01595 Domain of unknown function DUF21 10 190 2.7E-46 T 14-10-2018 IPR002550 CNNM, transmembrane domain Amir_2633 1ed6dfaa7d9cd5087b648dd927400579 425 Gene3D G3DSA:3.30.465.10 333 422 1.1E-18 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amir_2633 1ed6dfaa7d9cd5087b648dd927400579 425 SUPERFAMILY SSF56176 339 421 2.07E-14 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amir_2633 1ed6dfaa7d9cd5087b648dd927400579 425 Pfam PF03471 Transporter associated domain 343 421 1.1E-15 T 14-10-2018 IPR005170 Transporter-associated domain Amir_2633 1ed6dfaa7d9cd5087b648dd927400579 425 SUPERFAMILY SSF54631 208 344 2.65E-24 T 14-10-2018 Amir_2633 1ed6dfaa7d9cd5087b648dd927400579 425 SMART SM01091 341 422 1.6E-17 T 14-10-2018 IPR005170 Transporter-associated domain Amir_2633 1ed6dfaa7d9cd5087b648dd927400579 425 Pfam PF00571 CBS domain 280 326 2.4E-7 T 14-10-2018 IPR000644 CBS domain Amir_2633 1ed6dfaa7d9cd5087b648dd927400579 425 Pfam PF00571 CBS domain 216 267 0.0058 T 14-10-2018 IPR000644 CBS domain Amir_2633 1ed6dfaa7d9cd5087b648dd927400579 425 Gene3D G3DSA:3.10.580.10 191 332 1.2E-40 T 14-10-2018 Amir_1735 3879e787a743ea0297e30e02ce978f99 1627 Gene3D G3DSA:2.60.40.10 829 922 7.4E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_1735 3879e787a743ea0297e30e02ce978f99 1627 Pfam PF13313 Domain of unknown function (DUF4082) 1203 1352 4.8E-58 T 14-10-2018 IPR025141 Domain of unknown function DUF4082 Amir_1735 3879e787a743ea0297e30e02ce978f99 1627 Pfam PF13313 Domain of unknown function (DUF4082) 1471 1620 1.1E-56 T 14-10-2018 IPR025141 Domain of unknown function DUF4082 Amir_1735 3879e787a743ea0297e30e02ce978f99 1627 Pfam PF13313 Domain of unknown function (DUF4082) 653 810 3.5E-56 T 14-10-2018 IPR025141 Domain of unknown function DUF4082 Amir_1735 3879e787a743ea0297e30e02ce978f99 1627 Pfam PF13313 Domain of unknown function (DUF4082) 931 1082 4.2E-56 T 14-10-2018 IPR025141 Domain of unknown function DUF4082 Amir_1735 3879e787a743ea0297e30e02ce978f99 1627 Pfam PF13205 Bacterial Ig-like domain 1093 1193 1.3E-20 T 14-10-2018 IPR032812 SbsA, Ig-like domain Amir_1735 3879e787a743ea0297e30e02ce978f99 1627 Pfam PF13205 Bacterial Ig-like domain 821 919 4.6E-14 T 14-10-2018 IPR032812 SbsA, Ig-like domain Amir_1735 3879e787a743ea0297e30e02ce978f99 1627 Pfam PF13205 Bacterial Ig-like domain 1361 1461 7.9E-13 T 14-10-2018 IPR032812 SbsA, Ig-like domain Amir_1735 3879e787a743ea0297e30e02ce978f99 1627 SUPERFAMILY SSF81296 568 634 6.25E-11 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_1735 3879e787a743ea0297e30e02ce978f99 1627 Gene3D G3DSA:2.60.40.650 557 649 4.5E-8 T 14-10-2018 Amir_1735 3879e787a743ea0297e30e02ce978f99 1627 Gene3D G3DSA:2.60.40.3780 1092 1197 6.6E-5 T 14-10-2018 Amir_3531 1fe2cf186b1e2b8fd5b34358811bb550 754 SUPERFAMILY SSF52540 13 420 1.01E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3531 1fe2cf186b1e2b8fd5b34358811bb550 754 Gene3D G3DSA:1.10.8.280 152 260 2.1E-157 T 14-10-2018 Amir_3531 1fe2cf186b1e2b8fd5b34358811bb550 754 Gene3D G3DSA:3.40.50.300 12 439 2.1E-157 T 14-10-2018 Amir_3531 1fe2cf186b1e2b8fd5b34358811bb550 754 Gene3D G3DSA:1.20.1580.10 545 583 1.1E-102 T 14-10-2018 Amir_3531 1fe2cf186b1e2b8fd5b34358811bb550 754 Pfam PF00005 ABC transporter 469 671 8.9E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3531 1fe2cf186b1e2b8fd5b34358811bb550 754 Gene3D G3DSA:3.40.50.300 463 747 1.1E-102 T 14-10-2018 Amir_3531 1fe2cf186b1e2b8fd5b34358811bb550 754 SUPERFAMILY SSF52540 463 724 3.62E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3531 1fe2cf186b1e2b8fd5b34358811bb550 754 Gene3D G3DSA:1.20.1580.10 98 338 2.1E-157 T 14-10-2018 Amir_0617 7ef5c847d27dfd2800633f644f9bfd0e 677 Pfam PF08532 Beta-galactosidase trimerisation domain 398 590 1.5E-44 T 14-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_0617 7ef5c847d27dfd2800633f644f9bfd0e 677 SUPERFAMILY SSF52317 395 591 9.62E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_0617 7ef5c847d27dfd2800633f644f9bfd0e 677 SUPERFAMILY SSF51445 12 369 8.28E-115 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_0617 7ef5c847d27dfd2800633f644f9bfd0e 677 Pfam PF02449 Beta-galactosidase 16 387 3.9E-152 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_0617 7ef5c847d27dfd2800633f644f9bfd0e 677 Gene3D G3DSA:2.60.40.1180 609 665 1.1E-14 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_0617 7ef5c847d27dfd2800633f644f9bfd0e 677 PIRSF PIRSF001084 3 666 8.9E-242 T 14-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_0617 7ef5c847d27dfd2800633f644f9bfd0e 677 Gene3D G3DSA:3.20.20.80 6 392 1.5E-140 T 14-10-2018 Amir_0617 7ef5c847d27dfd2800633f644f9bfd0e 677 Pfam PF08533 Beta-galactosidase C-terminal domain 610 665 1.1E-8 T 14-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_0617 7ef5c847d27dfd2800633f644f9bfd0e 677 Gene3D G3DSA:3.40.50.880 395 595 2.9E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_3437 9b2e87973ea9851307f0422bcebd436c 237 SUPERFAMILY SSF51735 6 237 1.25E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3437 9b2e87973ea9851307f0422bcebd436c 237 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 199 0.0046 T 14-10-2018 Amir_3437 9b2e87973ea9851307f0422bcebd436c 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3437 9b2e87973ea9851307f0422bcebd436c 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3437 9b2e87973ea9851307f0422bcebd436c 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3437 9b2e87973ea9851307f0422bcebd436c 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3437 9b2e87973ea9851307f0422bcebd436c 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3437 9b2e87973ea9851307f0422bcebd436c 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3437 9b2e87973ea9851307f0422bcebd436c 237 Gene3D G3DSA:3.40.50.720 4 237 8.4E-64 T 14-10-2018 Amir_3437 9b2e87973ea9851307f0422bcebd436c 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 237 2.6E-54 T 14-10-2018 Amir_3437 9b2e87973ea9851307f0422bcebd436c 237 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_4686 0e19008d85f256652373a68409315e53 403 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 124 338 5.3E-16 T 14-10-2018 IPR018713 Domain of unknown function DUF2236 Amir_6092 810c40d2f0dfd9fce80e777b3ca591cb 253 Gene3D G3DSA:3.40.50.300 4 252 1.0E-55 T 14-10-2018 Amir_6092 810c40d2f0dfd9fce80e777b3ca591cb 253 SMART SM00382 30 225 2.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6092 810c40d2f0dfd9fce80e777b3ca591cb 253 Pfam PF00005 ABC transporter 22 177 5.4E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6092 810c40d2f0dfd9fce80e777b3ca591cb 253 SUPERFAMILY SSF52540 4 234 3.72E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5130 5e5fea53468b58cadbcdab79af88e934 245 Pfam PF13580 SIS domain 10 144 1.9E-38 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Amir_5130 5e5fea53468b58cadbcdab79af88e934 245 SUPERFAMILY SSF53697 16 204 1.56E-19 T 14-10-2018 Amir_5130 5e5fea53468b58cadbcdab79af88e934 245 Gene3D G3DSA:3.40.50.10490 5 239 1.3E-63 T 14-10-2018 Amir_5656 a7cfba4ea9bb885eef5709e9cc94a7f8 281 SUPERFAMILY SSF53335 3 251 8.18E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_5656 a7cfba4ea9bb885eef5709e9cc94a7f8 281 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 1 280 15.465 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Amir_5656 a7cfba4ea9bb885eef5709e9cc94a7f8 281 Pfam PF01564 Spermine/spermidine synthase domain 56 214 8.5E-14 T 14-10-2018 Amir_5656 a7cfba4ea9bb885eef5709e9cc94a7f8 281 Gene3D G3DSA:3.40.50.150 50 279 8.6E-37 T 14-10-2018 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 PRINTS PR00097 Anthranilate synthase component II signature 250 261 5.6E-6 T 14-10-2018 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 PRINTS PR00097 Anthranilate synthase component II signature 222 231 5.6E-6 T 14-10-2018 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 PRINTS PR00097 Anthranilate synthase component II signature 341 354 5.6E-6 T 14-10-2018 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 Gene3D G3DSA:3.40.50.880 152 369 2.8E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 Gene3D G3DSA:3.50.30.20 1 151 2.9E-56 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 367 8.1E-133 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 219 233 8.0E-33 T 14-10-2018 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 180 194 8.0E-33 T 14-10-2018 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 267 284 8.0E-33 T 14-10-2018 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 250 266 8.0E-33 T 14-10-2018 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 292 303 8.0E-33 T 14-10-2018 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 2 370 44.893 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 Pfam PF00117 Glutamine amidotransferase class-I 184 364 2.6E-37 T 14-10-2018 IPR017926 Glutamine amidotransferase Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 4 130 7.4E-51 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 SMART SM01097 2 132 9.0E-84 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 SUPERFAMILY SSF52317 172 368 5.35E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 PRINTS PR00096 Glutamine amidotransferase superfamily signature 222 231 2.2E-11 T 14-10-2018 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 PRINTS PR00096 Glutamine amidotransferase superfamily signature 341 354 2.2E-11 T 14-10-2018 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 PRINTS PR00096 Glutamine amidotransferase superfamily signature 250 261 2.2E-11 T 14-10-2018 Amir_5242 dc86575462f9861b4b290e01df11e8d9 370 SUPERFAMILY SSF52021 2 135 3.66E-54 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_4455 6ef7eb50e5809d107207a2bf60112d65 319 SUPERFAMILY SSF46689 202 252 1.89E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4455 6ef7eb50e5809d107207a2bf60112d65 319 Pfam PF12852 Cupin 2 186 1.1E-48 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain Amir_4455 6ef7eb50e5809d107207a2bf60112d65 319 Pfam PF12833 Helix-turn-helix domain 224 301 2.6E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4455 6ef7eb50e5809d107207a2bf60112d65 319 SMART SM00342 218 301 9.6E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4455 6ef7eb50e5809d107207a2bf60112d65 319 SUPERFAMILY SSF46689 254 302 5.38E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4455 6ef7eb50e5809d107207a2bf60112d65 319 Gene3D G3DSA:1.10.10.60 199 305 6.7E-23 T 14-10-2018 Amir_1184 08945b5ce9357619ef8accf4807c4de1 567 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 211 221 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Amir_1184 08945b5ce9357619ef8accf4807c4de1 567 Pfam PF00082 Subtilase family 162 458 2.0E-40 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_1184 08945b5ce9357619ef8accf4807c4de1 567 Gene3D G3DSA:3.40.50.200 124 492 6.6E-78 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_1184 08945b5ce9357619ef8accf4807c4de1 567 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 166 177 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_1184 08945b5ce9357619ef8accf4807c4de1 567 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 411 421 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_1184 08945b5ce9357619ef8accf4807c4de1 567 PRINTS PR00723 Subtilisin serine protease family (S8) signature 161 180 8.5E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1184 08945b5ce9357619ef8accf4807c4de1 567 PRINTS PR00723 Subtilisin serine protease family (S8) signature 207 220 8.5E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1184 08945b5ce9357619ef8accf4807c4de1 567 PRINTS PR00723 Subtilisin serine protease family (S8) signature 410 426 8.5E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1184 08945b5ce9357619ef8accf4807c4de1 567 SUPERFAMILY SSF52743 142 491 9.56E-68 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_1670 a0f84093ffa14b91a76855a125e75590 231 SMART SM00382 26 209 4.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1670 a0f84093ffa14b91a76855a125e75590 231 SUPERFAMILY SSF52540 2 222 2.19E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1670 a0f84093ffa14b91a76855a125e75590 231 Gene3D G3DSA:3.40.50.300 1 228 1.3E-62 T 14-10-2018 Amir_1670 a0f84093ffa14b91a76855a125e75590 231 Pfam PF00005 ABC transporter 19 160 3.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1670 a0f84093ffa14b91a76855a125e75590 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 1.9E-91 T 14-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE Amir_2256 78aa5935efd53a79522ebc93b08f5914 434 Gene3D G3DSA:3.30.1050.10 315 424 7.8E-21 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Amir_2256 78aa5935efd53a79522ebc93b08f5914 434 Pfam PF13527 Acetyltransferase (GNAT) domain 12 132 4.3E-22 T 14-10-2018 Amir_2256 78aa5935efd53a79522ebc93b08f5914 434 SUPERFAMILY SSF55729 10 316 1.63E-48 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_2256 78aa5935efd53a79522ebc93b08f5914 434 Gene3D G3DSA:3.40.630.30 136 309 2.9E-30 T 14-10-2018 Amir_2256 78aa5935efd53a79522ebc93b08f5914 434 Gene3D G3DSA:3.40.630.30 4 135 1.6E-28 T 14-10-2018 Amir_2256 78aa5935efd53a79522ebc93b08f5914 434 Hamap MF_01812 N-acetyltransferase Eis [eis]. 12 434 31.179 T 14-10-2018 IPR022902 N-acetyltransferase Eis Amir_2256 78aa5935efd53a79522ebc93b08f5914 434 Pfam PF13530 Sterol carrier protein domain 199 429 1.7E-51 T 14-10-2018 IPR025559 Enhanced intracellular survival protein domain Amir_2256 78aa5935efd53a79522ebc93b08f5914 434 SUPERFAMILY SSF55718 317 434 9.42E-14 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Amir_1412 6379749f8868ab3351831a873d4cda4e 331 SUPERFAMILY SSF53686 6 329 1.19E-95 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amir_1412 6379749f8868ab3351831a873d4cda4e 331 TIGRFAM TIGR01274 ACC_deam: 1-aminocyclopropane-1-carboxylate deaminase 3 331 3.5E-166 T 14-10-2018 IPR005965 1-aminocyclopropane-1-carboxylate deaminase GO:0008660|GO:0009310|GO:0030170 KEGG: 00270+3.5.99.7 Amir_1412 6379749f8868ab3351831a873d4cda4e 331 Gene3D G3DSA:3.40.50.1100 67 165 6.6E-113 T 14-10-2018 Amir_1412 6379749f8868ab3351831a873d4cda4e 331 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 13 316 1.3E-43 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amir_1412 6379749f8868ab3351831a873d4cda4e 331 PIRSF PIRSF006278 1 331 4.2E-119 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase Amir_1412 6379749f8868ab3351831a873d4cda4e 331 Gene3D G3DSA:3.40.50.1100 16 327 6.6E-113 T 14-10-2018 Amir_5478 1f6bb93d143231d6a9c003ffe06a0f0e 249 Pfam PF01614 Bacterial transcriptional regulator 117 240 8.6E-35 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Amir_5478 1f6bb93d143231d6a9c003ffe06a0f0e 249 Gene3D G3DSA:1.10.10.10 2 73 3.5E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5478 1f6bb93d143231d6a9c003ffe06a0f0e 249 Pfam PF09339 IclR helix-turn-helix domain 4 53 2.7E-10 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_5478 1f6bb93d143231d6a9c003ffe06a0f0e 249 SMART SM00346 2 89 1.7E-16 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_5478 1f6bb93d143231d6a9c003ffe06a0f0e 249 SUPERFAMILY SSF55781 57 245 3.99E-49 T 14-10-2018 Amir_5478 1f6bb93d143231d6a9c003ffe06a0f0e 249 Gene3D G3DSA:3.30.450.40 74 248 1.1E-56 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_5478 1f6bb93d143231d6a9c003ffe06a0f0e 249 SUPERFAMILY SSF46785 3 72 6.83E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0359 85abcec07ad6798a54e84b95f10a6b20 321 Gene3D G3DSA:3.30.1330.30 64 148 2.0E-7 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Amir_0359 85abcec07ad6798a54e84b95f10a6b20 321 SMART SM00967 76 152 5.6E-16 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Amir_0359 85abcec07ad6798a54e84b95f10a6b20 321 SUPERFAMILY SSF75217 142 317 3.92E-43 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Amir_0359 85abcec07ad6798a54e84b95f10a6b20 321 Gene3D G3DSA:3.40.1280.10 150 317 1.2E-49 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Amir_0359 85abcec07ad6798a54e84b95f10a6b20 321 Pfam PF00588 SpoU rRNA Methylase family 169 309 4.2E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Amir_0359 85abcec07ad6798a54e84b95f10a6b20 321 SUPERFAMILY SSF55315 70 149 3.77E-15 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Amir_0359 85abcec07ad6798a54e84b95f10a6b20 321 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 76 316 6.0E-59 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Amir_0359 85abcec07ad6798a54e84b95f10a6b20 321 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 77 152 1.1E-16 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Amir_5855 b27a4177bf7eb5659da6ab3d43a33453 261 Gene3D G3DSA:2.40.10.10 38 250 1.1E-70 T 14-10-2018 Amir_5855 b27a4177bf7eb5659da6ab3d43a33453 261 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 210 222 4.6E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_5855 b27a4177bf7eb5659da6ab3d43a33453 261 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 121 135 4.6E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_5855 b27a4177bf7eb5659da6ab3d43a33453 261 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 65 80 4.6E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_5855 b27a4177bf7eb5659da6ab3d43a33453 261 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 75 80 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 Amir_5855 b27a4177bf7eb5659da6ab3d43a33453 261 SUPERFAMILY SSF50494 1 254 6.85E-66 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_5855 b27a4177bf7eb5659da6ab3d43a33453 261 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 211 222 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site Amir_5855 b27a4177bf7eb5659da6ab3d43a33453 261 Pfam PF00089 Trypsin 38 254 1.7E-56 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_5855 b27a4177bf7eb5659da6ab3d43a33453 261 Gene3D G3DSA:2.40.10.10 50 252 1.1E-70 T 14-10-2018 Amir_5855 b27a4177bf7eb5659da6ab3d43a33453 261 SMART SM00020 37 256 4.7E-69 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_0388 58d909bd647aff49657d82049ba7b285 248 Pfam PF11361 Protein of unknown function (DUF3159) 18 203 2.5E-51 T 14-10-2018 IPR016566 Uncharacterised conserved protein UCP010219 Amir_2716 5490d70d217a4678d54e374f06b186c8 941 Gene3D G3DSA:1.25.40.10 685 839 2.3E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2716 5490d70d217a4678d54e374f06b186c8 941 Pfam PF13191 AAA ATPase domain 11 174 6.7E-17 T 14-10-2018 Amir_2716 5490d70d217a4678d54e374f06b186c8 941 Gene3D G3DSA:1.10.10.10 854 926 1.1E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2716 5490d70d217a4678d54e374f06b186c8 941 SUPERFAMILY SSF52540 8 241 2.88E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2716 5490d70d217a4678d54e374f06b186c8 941 SUPERFAMILY SSF48452 541 636 2.52E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2716 5490d70d217a4678d54e374f06b186c8 941 Gene3D G3DSA:1.25.40.10 521 658 3.2E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2716 5490d70d217a4678d54e374f06b186c8 941 Pfam PF00196 Bacterial regulatory proteins, luxR family 871 922 3.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2716 5490d70d217a4678d54e374f06b186c8 941 SUPERFAMILY SSF46894 865 922 5.1E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_2716 5490d70d217a4678d54e374f06b186c8 941 SMART SM00421 869 926 3.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2716 5490d70d217a4678d54e374f06b186c8 941 ProSitePatterns PS00622 LuxR-type HTH domain signature. 886 913 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2716 5490d70d217a4678d54e374f06b186c8 941 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 886 902 9.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2716 5490d70d217a4678d54e374f06b186c8 941 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 902 914 9.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2716 5490d70d217a4678d54e374f06b186c8 941 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 872 886 9.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5933 72137e0a5d1718f6d2f8da17d30d15db 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Amir_5933 72137e0a5d1718f6d2f8da17d30d15db 112 SMART SM00938 4 105 6.7E-60 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amir_5933 72137e0a5d1718f6d2f8da17d30d15db 112 Gene3D G3DSA:3.30.70.120 1 112 2.0E-44 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Amir_5933 72137e0a5d1718f6d2f8da17d30d15db 112 SUPERFAMILY SSF54913 2 112 1.37E-42 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Amir_5933 72137e0a5d1718f6d2f8da17d30d15db 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.0E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amir_5933 72137e0a5d1718f6d2f8da17d30d15db 112 PIRSF PIRSF039144 1 112 6.1E-53 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amir_5933 72137e0a5d1718f6d2f8da17d30d15db 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Amir_5933 72137e0a5d1718f6d2f8da17d30d15db 112 PRINTS PR00340 P-II protein signature 83 103 4.4E-39 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amir_5933 72137e0a5d1718f6d2f8da17d30d15db 112 PRINTS PR00340 P-II protein signature 2 17 4.4E-39 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amir_5933 72137e0a5d1718f6d2f8da17d30d15db 112 PRINTS PR00340 P-II protein signature 23 41 4.4E-39 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amir_5933 72137e0a5d1718f6d2f8da17d30d15db 112 PRINTS PR00340 P-II protein signature 52 75 4.4E-39 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amir_4407 6cc95bca453b585345cd43dbecc27a59 127 SUPERFAMILY SSF52091 13 115 5.69E-19 T 14-10-2018 IPR036513 STAS domain superfamily Amir_4407 6cc95bca453b585345cd43dbecc27a59 127 Gene3D G3DSA:3.30.750.24 7 116 2.9E-25 T 14-10-2018 IPR036513 STAS domain superfamily Amir_4407 6cc95bca453b585345cd43dbecc27a59 127 Pfam PF13466 STAS domain 19 99 4.2E-13 T 14-10-2018 IPR002645 STAS domain Amir_4407 6cc95bca453b585345cd43dbecc27a59 127 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 15 108 4.0E-17 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Amir_0724 69b5c7927fb3709eb898eb86e66b2c5e 350 Gene3D G3DSA:3.30.540.10 20 323 4.6E-132 T 14-10-2018 Amir_0724 69b5c7927fb3709eb898eb86e66b2c5e 350 PIRSF PIRSF004532 14 334 1.4E-147 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Amir_0724 69b5c7927fb3709eb898eb86e66b2c5e 350 SUPERFAMILY SSF56655 14 326 9.89E-114 T 14-10-2018 Amir_0724 69b5c7927fb3709eb898eb86e66b2c5e 350 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 16 323 2.2E-142 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Amir_0724 69b5c7927fb3709eb898eb86e66b2c5e 350 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 16 327 1.5E-114 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Amir_0724 69b5c7927fb3709eb898eb86e66b2c5e 350 Gene3D G3DSA:3.40.190.90 136 297 4.6E-132 T 14-10-2018 Amir_6401 58b11e9a711be44fa3095abf63def549 421 Pfam PF00823 PPE family 18 162 9.5E-10 T 14-10-2018 IPR000030 PPE family Amir_6401 58b11e9a711be44fa3095abf63def549 421 SUPERFAMILY SSF140459 7 176 1.6E-17 T 14-10-2018 Amir_6401 58b11e9a711be44fa3095abf63def549 421 Gene3D G3DSA:1.20.1260.20 7 177 1.8E-14 T 14-10-2018 IPR038332 PPE superfamily Amir_5945 79b367a006f2902bfe1782679bc6ccaa 490 SUPERFAMILY SSF52540 284 490 7.22E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5945 79b367a006f2902bfe1782679bc6ccaa 490 Pfam PF02881 SRP54-type protein, helical bundle domain 205 268 3.0E-9 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amir_5945 79b367a006f2902bfe1782679bc6ccaa 490 SMART SM00963 192 272 1.0E-17 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amir_5945 79b367a006f2902bfe1782679bc6ccaa 490 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 216 487 2.9E-102 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Amir_5945 79b367a006f2902bfe1782679bc6ccaa 490 SMART SM00382 288 438 1.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5945 79b367a006f2902bfe1782679bc6ccaa 490 Gene3D G3DSA:3.40.50.300 289 476 3.0E-97 T 14-10-2018 Amir_5945 79b367a006f2902bfe1782679bc6ccaa 490 SMART SM00962 289 488 5.2E-99 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amir_5945 79b367a006f2902bfe1782679bc6ccaa 490 Pfam PF00448 SRP54-type protein, GTPase domain 289 488 2.6E-71 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amir_5945 79b367a006f2902bfe1782679bc6ccaa 490 Gene3D G3DSA:1.20.120.140 190 486 3.0E-97 T 14-10-2018 Amir_5945 79b367a006f2902bfe1782679bc6ccaa 490 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 461 474 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amir_5945 79b367a006f2902bfe1782679bc6ccaa 490 SUPERFAMILY SSF47364 187 266 4.06E-17 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Amir_5945 79b367a006f2902bfe1782679bc6ccaa 490 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 215 488 56.925 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Amir_6083 a072cb9b4d97fb9876b2fe735825c5ea 363 SUPERFAMILY SSF56112 114 313 3.57E-16 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_6083 a072cb9b4d97fb9876b2fe735825c5ea 363 Pfam PF01636 Phosphotransferase enzyme family 209 268 8.5E-7 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_4015 2a17c1982923c013e4fc004f664984e2 285 Gene3D G3DSA:3.40.50.720 8 257 7.6E-93 T 14-10-2018 Amir_4015 2a17c1982923c013e4fc004f664984e2 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 258 266 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_4015 2a17c1982923c013e4fc004f664984e2 285 SUPERFAMILY SSF51735 137 280 1.81E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4015 2a17c1982923c013e4fc004f664984e2 285 SUPERFAMILY SSF53223 5 124 5.18E-34 T 14-10-2018 Amir_4015 2a17c1982923c013e4fc004f664984e2 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 8 123 2.2E-35 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_4015 2a17c1982923c013e4fc004f664984e2 285 Gene3D G3DSA:3.40.50.10860 10 274 7.6E-93 T 14-10-2018 Amir_4015 2a17c1982923c013e4fc004f664984e2 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 254 272 5.0E-48 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_4015 2a17c1982923c013e4fc004f664984e2 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 237 253 5.0E-48 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_4015 2a17c1982923c013e4fc004f664984e2 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 112 133 5.0E-48 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_4015 2a17c1982923c013e4fc004f664984e2 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 36 58 5.0E-48 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_4015 2a17c1982923c013e4fc004f664984e2 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 157 177 5.0E-48 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_4015 2a17c1982923c013e4fc004f664984e2 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 77 104 5.0E-48 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_4015 2a17c1982923c013e4fc004f664984e2 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 130 280 4.6E-56 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_4015 2a17c1982923c013e4fc004f664984e2 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 5 281 33.968 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amir_4253 90c2fc8ff55b50bae116748496ce5381 198 Gene3D G3DSA:2.160.10.10 9 195 2.7E-64 T 14-10-2018 Amir_4253 90c2fc8ff55b50bae116748496ce5381 198 Pfam PF12464 Maltose acetyltransferase 16 68 6.7E-10 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 Amir_4253 90c2fc8ff55b50bae116748496ce5381 198 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 149 177 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Amir_4253 90c2fc8ff55b50bae116748496ce5381 198 SMART SM01266 14 69 6.3E-12 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 Amir_4253 90c2fc8ff55b50bae116748496ce5381 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 141 175 5.5E-11 T 14-10-2018 IPR001451 Hexapeptide repeat Amir_4253 90c2fc8ff55b50bae116748496ce5381 198 SUPERFAMILY SSF51161 14 194 1.8E-51 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Amir_4643 97ef0ac06fff29d71a0cd86e2009d019 266 Gene3D G3DSA:3.90.550.10 1 215 2.3E-15 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_4643 97ef0ac06fff29d71a0cd86e2009d019 266 SUPERFAMILY SSF53448 2 214 3.0E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_4643 97ef0ac06fff29d71a0cd86e2009d019 266 Pfam PF00535 Glycosyl transferase family 2 5 115 1.1E-11 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_5264 148970b821a845118266be931ec8e605 170 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 18 149 4.6E-28 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Amir_5264 148970b821a845118266be931ec8e605 170 Gene3D G3DSA:3.30.420.140 15 160 1.1E-44 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Amir_5264 148970b821a845118266be931ec8e605 170 Pfam PF03652 Holliday junction resolvase 16 149 5.3E-42 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Amir_5264 148970b821a845118266be931ec8e605 170 SUPERFAMILY SSF53098 15 150 1.44E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_5264 148970b821a845118266be931ec8e605 170 SMART SM00732 15 117 8.8E-23 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Amir_5264 148970b821a845118266be931ec8e605 170 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 15 152 22.764 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Amir_3092 ff927d60fe16d51f85d98d8a1eddff9f 287 SMART SM00530 10 82 1.7E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_3092 ff927d60fe16d51f85d98d8a1eddff9f 287 Pfam PF13560 Helix-turn-helix domain 8 85 4.1E-13 T 14-10-2018 Amir_3092 ff927d60fe16d51f85d98d8a1eddff9f 287 SUPERFAMILY SSF47413 27 81 6.68E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3092 ff927d60fe16d51f85d98d8a1eddff9f 287 Gene3D G3DSA:3.30.450.180 111 281 3.2E-15 T 14-10-2018 Amir_3092 ff927d60fe16d51f85d98d8a1eddff9f 287 Gene3D G3DSA:1.10.260.40 14 86 6.2E-6 T 14-10-2018 Amir_5103 d3fc6213fa4f23b3bf08c87d63f11fab 301 Gene3D G3DSA:3.50.30.60 155 295 4.0E-25 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily Amir_5103 d3fc6213fa4f23b3bf08c87d63f11fab 301 Gene3D G3DSA:3.40.50.10740 7 154 9.2E-44 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal Amir_5103 d3fc6213fa4f23b3bf08c87d63f11fab 301 PIRSF PIRSF028757 4 300 4.0E-55 T 14-10-2018 IPR003507 Peptidase family S66 Amir_5103 d3fc6213fa4f23b3bf08c87d63f11fab 301 SUPERFAMILY SSF141986 165 293 6.28E-26 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily Amir_5103 d3fc6213fa4f23b3bf08c87d63f11fab 301 Pfam PF02016 LD-carboxypeptidase 16 283 6.5E-62 T 14-10-2018 IPR003507 Peptidase family S66 Amir_5103 d3fc6213fa4f23b3bf08c87d63f11fab 301 SUPERFAMILY SSF52317 4 134 7.78E-41 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 Gene3D G3DSA:3.30.2090.10 701 784 1.3E-267 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 Gene3D G3DSA:3.30.70.1430 556 652 1.3E-267 T 14-10-2018 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 Gene3D G3DSA:1.20.1640.10 14 501 1.3E-267 T 14-10-2018 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 SUPERFAMILY SSF82693 41 130 1.91E-19 T 14-10-2018 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 SUPERFAMILY SSF82693 134 304 3.5E-11 T 14-10-2018 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 Gene3D G3DSA:1.20.1640.10 502 999 1.3E-267 T 14-10-2018 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 Gene3D G3DSA:3.30.70.1320 132 318 1.3E-267 T 14-10-2018 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 SUPERFAMILY SSF82866 781 1007 3.66E-50 T 14-10-2018 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 SUPERFAMILY SSF82714 181 257 3.14E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 Gene3D G3DSA:3.30.70.1430 41 792 1.3E-267 T 14-10-2018 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 PRINTS PR00702 Acriflavin resistance protein family signature 349 370 1.0E-42 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 PRINTS PR00702 Acriflavin resistance protein family signature 455 478 1.0E-42 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.0E-42 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 PRINTS PR00702 Acriflavin resistance protein family signature 377 401 1.0E-42 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 PRINTS PR00702 Acriflavin resistance protein family signature 322 345 1.0E-42 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.0E-42 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 PRINTS PR00702 Acriflavin resistance protein family signature 430 453 1.0E-42 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 Pfam PF00873 AcrB/AcrD/AcrF family 5 1002 4.5E-206 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 Gene3D G3DSA:3.30.70.1440 653 841 1.3E-267 T 14-10-2018 Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 Gene3D G3DSA:3.30.2090.10 177 263 1.3E-267 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amir_2548 ea14db9545240c73e0d7e6f2e2c87ef5 1028 SUPERFAMILY SSF82866 285 483 2.49E-42 T 14-10-2018 Amir_0321 4c7d9a39f29177e6899fbfbee998267e 145 PIRSF PIRSF034110 3 141 5.3E-24 T 14-10-2018 IPR009593 Protein of unknown function DUF1203 Amir_0321 4c7d9a39f29177e6899fbfbee998267e 145 Pfam PF06718 Protein of unknown function (DUF1203) 27 139 5.2E-30 T 14-10-2018 IPR009593 Protein of unknown function DUF1203 Amir_0489 9878101598072ded27f82eea64e805ee 148 Gene3D G3DSA:1.10.10.10 14 147 1.4E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0489 9878101598072ded27f82eea64e805ee 148 SUPERFAMILY SSF46785 12 143 1.56E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0489 9878101598072ded27f82eea64e805ee 148 Pfam PF01047 MarR family 39 96 7.8E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0489 9878101598072ded27f82eea64e805ee 148 SMART SM00347 32 132 1.6E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2988 ec220520082f102120679468bdb6fe8d 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 Amir_2988 ec220520082f102120679468bdb6fe8d 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 9.8E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_2988 ec220520082f102120679468bdb6fe8d 328 Gene3D G3DSA:1.10.260.40 1 55 9.9E-23 T 14-10-2018 Amir_2988 ec220520082f102120679468bdb6fe8d 328 Gene3D G3DSA:3.40.50.2300 56 303 1.3E-34 T 14-10-2018 Amir_2988 ec220520082f102120679468bdb6fe8d 328 SUPERFAMILY SSF47413 1 59 2.06E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2988 ec220520082f102120679468bdb6fe8d 328 SMART SM00354 1 71 1.3E-27 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_2988 ec220520082f102120679468bdb6fe8d 328 SUPERFAMILY SSF53822 58 305 4.12E-29 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_2988 ec220520082f102120679468bdb6fe8d 328 Pfam PF13377 Periplasmic binding protein-like domain 168 322 1.5E-19 T 14-10-2018 Amir_2988 ec220520082f102120679468bdb6fe8d 328 Gene3D G3DSA:3.40.50.2300 160 288 1.3E-34 T 14-10-2018 Amir_6085 7952f13d64867dc2992753520e72cf71 312 SMART SM00382 34 212 2.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6085 7952f13d64867dc2992753520e72cf71 312 Pfam PF00005 ABC transporter 25 165 5.2E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6085 7952f13d64867dc2992753520e72cf71 312 SUPERFAMILY SSF52540 11 227 1.55E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6085 7952f13d64867dc2992753520e72cf71 312 Gene3D G3DSA:3.40.50.300 3 231 2.2E-55 T 14-10-2018 Amir_2770 82cc0c1543693f15eb6be9231a63b6ff 632 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 361 596 3.0E-81 T 14-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related Amir_5959 43f6fdaf0233e890d020b6dc3f82e4f5 373 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 250 272 3.0E-13 T 14-10-2018 Amir_5959 43f6fdaf0233e890d020b6dc3f82e4f5 373 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 3.0E-13 T 14-10-2018 Amir_5959 43f6fdaf0233e890d020b6dc3f82e4f5 373 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 3.0E-13 T 14-10-2018 Amir_5959 43f6fdaf0233e890d020b6dc3f82e4f5 373 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 280 1.9E-41 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_5959 43f6fdaf0233e890d020b6dc3f82e4f5 373 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 272 3.9E-10 T 14-10-2018 Amir_5959 43f6fdaf0233e890d020b6dc3f82e4f5 373 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 3.9E-10 T 14-10-2018 Amir_5959 43f6fdaf0233e890d020b6dc3f82e4f5 373 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.9E-10 T 14-10-2018 Amir_5959 43f6fdaf0233e890d020b6dc3f82e4f5 373 Gene3D G3DSA:3.50.50.100 1 366 5.7E-77 T 14-10-2018 Amir_5959 43f6fdaf0233e890d020b6dc3f82e4f5 373 SUPERFAMILY SSF51905 1 292 1.61E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6539 ab984709e177f8a97bc0cd66dfc737d6 198 ProSitePatterns PS00622 LuxR-type HTH domain signature. 151 178 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6539 ab984709e177f8a97bc0cd66dfc737d6 198 Gene3D G3DSA:1.10.10.10 129 198 5.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6539 ab984709e177f8a97bc0cd66dfc737d6 198 Gene3D G3DSA:3.40.50.2300 2 128 2.3E-19 T 14-10-2018 Amir_6539 ab984709e177f8a97bc0cd66dfc737d6 198 SUPERFAMILY SSF46894 125 197 1.94E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_6539 ab984709e177f8a97bc0cd66dfc737d6 198 Pfam PF00072 Response regulator receiver domain 4 115 2.0E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6539 ab984709e177f8a97bc0cd66dfc737d6 198 SMART SM00421 134 191 6.1E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6539 ab984709e177f8a97bc0cd66dfc737d6 198 SMART SM00448 2 115 3.2E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6539 ab984709e177f8a97bc0cd66dfc737d6 198 SUPERFAMILY SSF52172 3 123 1.35E-16 T 14-10-2018 IPR011006 CheY-like superfamily Amir_6539 ab984709e177f8a97bc0cd66dfc737d6 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 136 189 2.2E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6539 ab984709e177f8a97bc0cd66dfc737d6 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 137 151 8.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6539 ab984709e177f8a97bc0cd66dfc737d6 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 167 8.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6539 ab984709e177f8a97bc0cd66dfc737d6 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 179 8.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4507 41ab8273d92b0e09386c3009ef04ced4 82 SUPERFAMILY SSF142906 4 77 6.02E-6 T 14-10-2018 IPR038056 YjbR-like superfamily Amir_2557 6828940629324e44e24693a1b075504f 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 64 1.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2557 6828940629324e44e24693a1b075504f 186 SUPERFAMILY SSF48498 84 185 3.29E-14 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_2557 6828940629324e44e24693a1b075504f 186 Gene3D G3DSA:1.10.357.10 2 186 8.2E-57 T 14-10-2018 Amir_2557 6828940629324e44e24693a1b075504f 186 SUPERFAMILY SSF46689 10 78 7.98E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5391 4aaa44fbd1131c819e873a10ccd81bcb 514 Pfam PF17482 Phage tail sheath C-terminal domain 397 503 4.9E-21 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain Amir_5391 4aaa44fbd1131c819e873a10ccd81bcb 514 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 212 396 2.3E-35 T 14-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain Amir_5391 4aaa44fbd1131c819e873a10ccd81bcb 514 Gene3D G3DSA:3.40.50.11780 226 365 4.0E-14 T 14-10-2018 Amir_0839 687b8daad455f52445e885bebde22b7f 130 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 27 127 1.8E-28 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 Amir_0839 687b8daad455f52445e885bebde22b7f 130 Gene3D G3DSA:2.102.10.10 21 129 1.0E-35 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Amir_0839 687b8daad455f52445e885bebde22b7f 130 SUPERFAMILY SSF50022 25 129 1.15E-31 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Amir_0839 687b8daad455f52445e885bebde22b7f 130 Pfam PF13806 Rieske-like [2Fe-2S] domain 26 127 6.8E-33 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 Amir_1706 1e86038967a61b35282c8887e7f752c5 513 Pfam PF07907 YibE/F-like protein 183 421 1.7E-71 T 14-10-2018 IPR012507 YibE/F-like Amir_4335 f8c63032fdccd30592d01d01c00c615f 173 Gene3D G3DSA:3.30.70.920 70 162 2.9E-15 T 14-10-2018 Amir_4335 f8c63032fdccd30592d01d01c00c615f 173 Gene3D G3DSA:1.10.10.10 13 69 7.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4335 f8c63032fdccd30592d01d01c00c615f 173 Pfam PF01037 Lrp/AsnC ligand binding domain 91 156 8.8E-12 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Amir_4335 f8c63032fdccd30592d01d01c00c615f 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 45 64 3.8E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_4335 f8c63032fdccd30592d01d01c00c615f 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 34 3.8E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_4335 f8c63032fdccd30592d01d01c00c615f 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 45 3.8E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_4335 f8c63032fdccd30592d01d01c00c615f 173 SMART SM00344 18 127 2.3E-27 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Amir_4335 f8c63032fdccd30592d01d01c00c615f 173 SUPERFAMILY SSF54909 80 159 7.37E-11 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_4335 f8c63032fdccd30592d01d01c00c615f 173 SUPERFAMILY SSF46785 18 77 1.14E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4335 f8c63032fdccd30592d01d01c00c615f 173 Pfam PF13412 Winged helix-turn-helix DNA-binding 19 64 2.4E-13 T 14-10-2018 Amir_0563 06a4c731b9751b28d79ef8e7efa66543 584 Pfam PF12833 Helix-turn-helix domain 209 286 1.3E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_0563 06a4c731b9751b28d79ef8e7efa66543 584 Gene3D G3DSA:1.10.1670.10 534 581 9.6E-9 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Amir_0563 06a4c731b9751b28d79ef8e7efa66543 584 SMART SM00342 203 286 2.0E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_0563 06a4c731b9751b28d79ef8e7efa66543 584 SUPERFAMILY SSF55945 300 396 6.12E-23 T 14-10-2018 Amir_0563 06a4c731b9751b28d79ef8e7efa66543 584 Gene3D G3DSA:3.30.310.20 300 415 7.6E-23 T 14-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily Amir_0563 06a4c731b9751b28d79ef8e7efa66543 584 Gene3D G3DSA:1.10.10.60 186 291 5.1E-15 T 14-10-2018 Amir_0563 06a4c731b9751b28d79ef8e7efa66543 584 SUPERFAMILY SSF46689 240 288 1.7E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0563 06a4c731b9751b28d79ef8e7efa66543 584 SMART SM01009 300 415 1.5E-38 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal Amir_0563 06a4c731b9751b28d79ef8e7efa66543 584 SUPERFAMILY SSF48150 405 579 3.06E-11 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Amir_0563 06a4c731b9751b28d79ef8e7efa66543 584 Pfam PF06029 AlkA N-terminal domain 300 415 6.0E-29 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal Amir_0563 06a4c731b9751b28d79ef8e7efa66543 584 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 282 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amir_7076 b225d66cdb5b78ee0fac00fefc6a4951 193 Gene3D G3DSA:3.40.1740.10 4 184 5.8E-62 T 14-10-2018 Amir_7076 b225d66cdb5b78ee0fac00fefc6a4951 193 Pfam PF02622 Uncharacterized ACR, COG1678 20 177 6.3E-37 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 Amir_7076 b225d66cdb5b78ee0fac00fefc6a4951 193 SUPERFAMILY SSF143456 9 187 1.31E-48 T 14-10-2018 Amir_7076 b225d66cdb5b78ee0fac00fefc6a4951 193 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 9 190 25.893 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 Amir_4919 3fe5be70b254a55c79ea591b16c6d509 120 SUPERFAMILY SSF52091 8 106 4.91E-15 T 14-10-2018 IPR036513 STAS domain superfamily Amir_4919 3fe5be70b254a55c79ea591b16c6d509 120 Gene3D G3DSA:3.30.750.24 8 118 1.9E-17 T 14-10-2018 IPR036513 STAS domain superfamily Amir_4919 3fe5be70b254a55c79ea591b16c6d509 120 Pfam PF13466 STAS domain 20 98 7.3E-11 T 14-10-2018 IPR002645 STAS domain Amir_3827 1ea055949149a72f6aa12e80c12c0377 495 SUPERFAMILY SSF56801 33 486 2.75E-98 T 14-10-2018 Amir_3827 1ea055949149a72f6aa12e80c12c0377 495 Pfam PF00501 AMP-binding enzyme 144 387 8.7E-40 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3827 1ea055949149a72f6aa12e80c12c0377 495 Pfam PF00501 AMP-binding enzyme 39 131 9.5E-14 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3827 1ea055949149a72f6aa12e80c12c0377 495 Pfam PF13193 AMP-binding enzyme C-terminal domain 398 476 4.7E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3827 1ea055949149a72f6aa12e80c12c0377 495 Gene3D G3DSA:3.40.50.12780 10 384 2.0E-74 T 14-10-2018 Amir_3827 1ea055949149a72f6aa12e80c12c0377 495 Gene3D G3DSA:3.30.300.310 386 490 4.6E-17 T 14-10-2018 Amir_1914 79343645bf2ea2db01fddddd5965f447 123 Pfam PF00582 Universal stress protein family 6 105 2.2E-9 T 14-10-2018 IPR006016 UspA Amir_1914 79343645bf2ea2db01fddddd5965f447 123 SUPERFAMILY SSF52402 6 116 2.34E-11 T 14-10-2018 Amir_1914 79343645bf2ea2db01fddddd5965f447 123 Gene3D G3DSA:3.40.50.620 2 115 3.6E-16 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_5338 121beaf470bce60ba4a4ed98f6efddd5 81 SUPERFAMILY SSF50129 3 74 2.2E-16 T 14-10-2018 IPR011032 GroES-like superfamily Amir_5338 121beaf470bce60ba4a4ed98f6efddd5 81 Gene3D G3DSA:3.90.180.10 1 79 1.2E-18 T 14-10-2018 Amir_5338 121beaf470bce60ba4a4ed98f6efddd5 81 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 23 73 1.0E-4 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_1761 58fa1858b04e33ea6a23f3cc9bd6dd5e 530 Gene3D G3DSA:3.50.50.60 183 358 4.8E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1761 58fa1858b04e33ea6a23f3cc9bd6dd5e 530 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 2.5E-6 T 14-10-2018 Amir_1761 58fa1858b04e33ea6a23f3cc9bd6dd5e 530 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 2.5E-6 T 14-10-2018 Amir_1761 58fa1858b04e33ea6a23f3cc9bd6dd5e 530 SUPERFAMILY SSF51905 9 506 4.44E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1761 58fa1858b04e33ea6a23f3cc9bd6dd5e 530 Pfam PF13450 NAD(P)-binding Rossmann-like domain 13 61 2.8E-11 T 14-10-2018 Amir_1761 58fa1858b04e33ea6a23f3cc9bd6dd5e 530 Gene3D G3DSA:3.50.50.60 7 117 8.7E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4768 ef552243c221067364b66732c9a699d4 509 Pfam PF01297 Zinc-uptake complex component A periplasmic 37 507 4.3E-78 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Amir_4768 ef552243c221067364b66732c9a699d4 509 Gene3D G3DSA:3.40.50.1980 20 127 6.1E-21 T 14-10-2018 Amir_4768 ef552243c221067364b66732c9a699d4 509 Gene3D G3DSA:3.40.50.1980 391 509 4.9E-31 T 14-10-2018 Amir_4768 ef552243c221067364b66732c9a699d4 509 PRINTS PR00691 Adhesin B signature 59 77 2.7E-13 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Amir_4768 ef552243c221067364b66732c9a699d4 509 PRINTS PR00691 Adhesin B signature 34 55 2.7E-13 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Amir_4768 ef552243c221067364b66732c9a699d4 509 PRINTS PR00691 Adhesin B signature 78 97 2.7E-13 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Amir_4768 ef552243c221067364b66732c9a699d4 509 TIGRFAM TIGR03772 anch_rpt_subst: anchored repeat ABC transporter, substrate-binding protein 37 509 9.6E-195 T 14-10-2018 IPR022434 ABC transporter, LPXTG-anchor lipoprotein, actinobacteria Amir_4768 ef552243c221067364b66732c9a699d4 509 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 206 247 3.2E-12 T 14-10-2018 IPR022435 Surface-anchored repeat, actinobacteria Amir_4768 ef552243c221067364b66732c9a699d4 509 Gene3D G3DSA:3.40.50.1980 321 390 5.4E-17 T 14-10-2018 Amir_4768 ef552243c221067364b66732c9a699d4 509 SUPERFAMILY SSF53807 32 509 2.16E-67 T 14-10-2018 Amir_4768 ef552243c221067364b66732c9a699d4 509 PRINTS PR00690 Adhesin family signature 34 52 1.0E-11 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amir_4768 ef552243c221067364b66732c9a699d4 509 PRINTS PR00690 Adhesin family signature 65 78 1.0E-11 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amir_4768 ef552243c221067364b66732c9a699d4 509 PRINTS PR00690 Adhesin family signature 78 95 1.0E-11 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amir_6308 01e90f54f8b9f608bea7f4b3e727a6e7 577 Pfam PF10646 Sporulation and spore germination 174 284 2.0E-9 T 14-10-2018 IPR019606 GerMN domain Amir_6308 01e90f54f8b9f608bea7f4b3e727a6e7 577 SMART SM00909 200 288 3.7E-6 T 14-10-2018 IPR019606 GerMN domain Amir_6308 01e90f54f8b9f608bea7f4b3e727a6e7 577 Pfam PF10647 Lipoprotein LpqB beta-propeller domain 325 562 3.6E-43 T 14-10-2018 IPR018910 Lipoprotein LpqB, beta-propeller domain, C-terminal Amir_6340 02c2c8e77188bcc62022f6b696c55815 377 Gene3D G3DSA:3.40.50.2000 169 349 2.6E-55 T 14-10-2018 Amir_6340 02c2c8e77188bcc62022f6b696c55815 377 Gene3D G3DSA:3.40.50.2000 11 365 2.6E-55 T 14-10-2018 Amir_6340 02c2c8e77188bcc62022f6b696c55815 377 Pfam PF13439 Glycosyltransferase Family 4 13 173 1.8E-20 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amir_6340 02c2c8e77188bcc62022f6b696c55815 377 Pfam PF00534 Glycosyl transferases group 1 194 345 2.3E-19 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Amir_6340 02c2c8e77188bcc62022f6b696c55815 377 SUPERFAMILY SSF53756 8 368 1.81E-64 T 14-10-2018 Amir_3156 a685df559def3adcef7d135e5e71d162 388 SUPERFAMILY SSF52540 40 235 7.36E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5839 7086e5d8068a444426ebc8b7be71c20e 146 Gene3D G3DSA:1.20.1260.10 2 135 1.2E-41 T 14-10-2018 IPR012347 Ferritin-like Amir_5839 7086e5d8068a444426ebc8b7be71c20e 146 SUPERFAMILY SSF47240 3 142 1.0E-37 T 14-10-2018 IPR009078 Ferritin-like superfamily Amir_5839 7086e5d8068a444426ebc8b7be71c20e 146 Pfam PF14530 Domain of unknown function (DUF4439) 9 146 1.8E-42 T 14-10-2018 IPR029447 Domain of unknown function DUF4439 Amir_3424 6bd7f23e4bee5d6dcabdfa7c3536918d 348 Pfam PF01758 Sodium Bile acid symporter family 53 249 2.0E-59 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Amir_3424 6bd7f23e4bee5d6dcabdfa7c3536918d 348 PIRSF PIRSF005508 1 347 6.9E-130 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Amir_3424 6bd7f23e4bee5d6dcabdfa7c3536918d 348 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 8 336 9.2E-129 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Amir_3424 6bd7f23e4bee5d6dcabdfa7c3536918d 348 Gene3D G3DSA:1.20.1530.20 9 339 3.3E-25 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Amir_5861 aed9c71986d78486ee19b918030fdf31 680 Gene3D G3DSA:3.40.50.410 498 674 2.9E-23 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_5861 aed9c71986d78486ee19b918030fdf31 680 Gene3D G3DSA:3.40.50.300 3 212 9.3E-60 T 14-10-2018 Amir_5861 aed9c71986d78486ee19b918030fdf31 680 Gene3D G3DSA:1.10.8.80 257 345 5.1E-30 T 14-10-2018 Amir_5861 aed9c71986d78486ee19b918030fdf31 680 SMART SM00382 28 215 2.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5861 aed9c71986d78486ee19b918030fdf31 680 SUPERFAMILY SSF53300 498 663 1.13E-22 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_5861 aed9c71986d78486ee19b918030fdf31 680 TIGRFAM TIGR02442 Cob-chelat-sub: cobaltochelatase subunit 5 663 1.4E-239 T 14-10-2018 IPR012804 Cobaltochelatase subunit, putative Amir_5861 aed9c71986d78486ee19b918030fdf31 680 SMART SM00327 495 671 8.5E-23 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_5861 aed9c71986d78486ee19b918030fdf31 680 SUPERFAMILY SSF52540 5 338 1.21E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5861 aed9c71986d78486ee19b918030fdf31 680 Pfam PF13519 von Willebrand factor type A domain 498 604 4.3E-17 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_5861 aed9c71986d78486ee19b918030fdf31 680 Pfam PF01078 Magnesium chelatase, subunit ChlI 123 192 2.5E-9 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain Amir_5927 b59131176bb5c077e23d5c5ed3a742e8 252 Gene3D G3DSA:3.20.20.370 1 249 2.7E-95 T 14-10-2018 Amir_5927 b59131176bb5c077e23d5c5ed3a742e8 252 SUPERFAMILY SSF88713 2 245 5.86E-90 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Amir_5927 b59131176bb5c077e23d5c5ed3a742e8 252 Pfam PF03746 LamB/YcsF family 4 239 6.7E-96 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Amir_5927 b59131176bb5c077e23d5c5ed3a742e8 252 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 244 42.626 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Amir_3899 1777386408762b62615c1956caab8edd 287 Pfam PF13460 NAD(P)H-binding 6 144 3.4E-19 T 14-10-2018 IPR016040 NAD(P)-binding domain Amir_3899 1777386408762b62615c1956caab8edd 287 Gene3D G3DSA:3.90.25.10 139 269 1.4E-76 T 14-10-2018 Amir_3899 1777386408762b62615c1956caab8edd 287 Gene3D G3DSA:3.40.50.720 3 268 1.4E-76 T 14-10-2018 Amir_3899 1777386408762b62615c1956caab8edd 287 SUPERFAMILY SSF51735 2 277 8.06E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1608 16d3073351fea05621f5c5a6098099f6 270 Gene3D G3DSA:3.40.50.720 1 221 7.9E-58 T 14-10-2018 Amir_1608 16d3073351fea05621f5c5a6098099f6 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 7.0E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1608 16d3073351fea05621f5c5a6098099f6 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 7.0E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1608 16d3073351fea05621f5c5a6098099f6 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 7.0E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1608 16d3073351fea05621f5c5a6098099f6 270 Pfam PF00106 short chain dehydrogenase 6 193 3.5E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1608 16d3073351fea05621f5c5a6098099f6 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 5.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1608 16d3073351fea05621f5c5a6098099f6 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 5.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1608 16d3073351fea05621f5c5a6098099f6 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 5.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1608 16d3073351fea05621f5c5a6098099f6 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1608 16d3073351fea05621f5c5a6098099f6 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 5.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1608 16d3073351fea05621f5c5a6098099f6 270 SUPERFAMILY SSF51735 2 220 5.65E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5345 346bf9f308164256ba2e71fdaa77fe59 348 SUPERFAMILY SSF54631 210 342 2.15E-17 T 14-10-2018 Amir_5345 346bf9f308164256ba2e71fdaa77fe59 348 Pfam PF01595 Domain of unknown function DUF21 9 202 1.3E-42 T 14-10-2018 IPR002550 CNNM, transmembrane domain Amir_5345 346bf9f308164256ba2e71fdaa77fe59 348 Gene3D G3DSA:3.10.580.10 199 343 4.9E-28 T 14-10-2018 Amir_5698 2c5cba70f93217bf23c255cdaff38dff 222 Gene3D G3DSA:3.40.50.2300 1 126 1.5E-32 T 14-10-2018 Amir_5698 2c5cba70f93217bf23c255cdaff38dff 222 Gene3D G3DSA:1.10.10.10 127 221 1.2E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5698 2c5cba70f93217bf23c255cdaff38dff 222 Pfam PF00072 Response regulator receiver domain 3 109 2.9E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5698 2c5cba70f93217bf23c255cdaff38dff 222 SUPERFAMILY SSF52172 2 170 9.67E-36 T 14-10-2018 IPR011006 CheY-like superfamily Amir_5698 2c5cba70f93217bf23c255cdaff38dff 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 2.9E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_5698 2c5cba70f93217bf23c255cdaff38dff 222 SMART SM00448 1 108 7.6E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5698 2c5cba70f93217bf23c255cdaff38dff 222 SMART SM00862 146 218 1.2E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_3730 f9ad1219c614d1a628f7e868d9303415 417 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 245 409 2.2E-35 T 14-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain Amir_3730 f9ad1219c614d1a628f7e868d9303415 417 SUPERFAMILY SSF142764 2 416 9.42E-101 T 14-10-2018 Amir_3730 f9ad1219c614d1a628f7e868d9303415 417 Pfam PF07005 Putative sugar-binding N-terminal domain 2 224 3.2E-62 T 14-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain Amir_3730 f9ad1219c614d1a628f7e868d9303415 417 Gene3D G3DSA:3.40.50.10840 1 230 7.7E-75 T 14-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily Amir_3730 f9ad1219c614d1a628f7e868d9303415 417 Gene3D G3DSA:3.40.980.20 236 417 7.8E-47 T 14-10-2018 Amir_3497 3899e9e621393926bbcb7a598735603d 227 SUPERFAMILY SSF46955 3 106 2.56E-11 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_3497 3899e9e621393926bbcb7a598735603d 227 SMART SM00422 1 64 0.0084 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3497 3899e9e621393926bbcb7a598735603d 227 SMART SM00422 116 184 1.2E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3497 3899e9e621393926bbcb7a598735603d 227 SUPERFAMILY SSF46955 117 222 3.11E-17 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_3497 3899e9e621393926bbcb7a598735603d 227 Gene3D G3DSA:1.10.1660.10 111 226 3.7E-21 T 14-10-2018 Amir_3497 3899e9e621393926bbcb7a598735603d 227 Gene3D G3DSA:1.10.1660.10 1 110 1.6E-12 T 14-10-2018 Amir_3497 3899e9e621393926bbcb7a598735603d 227 Pfam PF00376 MerR family regulatory protein 5 39 3.2E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3497 3899e9e621393926bbcb7a598735603d 227 Pfam PF13411 MerR HTH family regulatory protein 118 181 9.2E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6823 37c11f0d92e2228c0e7505eadffb6929 250 SMART SM00862 145 219 1.5E-30 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_6823 37c11f0d92e2228c0e7505eadffb6929 250 SUPERFAMILY SSF46894 123 220 1.64E-30 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_6823 37c11f0d92e2228c0e7505eadffb6929 250 Gene3D G3DSA:1.10.10.10 116 222 2.6E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6823 37c11f0d92e2228c0e7505eadffb6929 250 Gene3D G3DSA:3.40.50.2300 2 115 3.0E-43 T 14-10-2018 Amir_6823 37c11f0d92e2228c0e7505eadffb6929 250 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 219 3.5E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2901 83e5fb529badca723ce76d02814ab0c2 451 Gene3D G3DSA:3.30.300.30 355 451 1.2E-23 T 14-10-2018 Amir_2901 83e5fb529badca723ce76d02814ab0c2 451 Pfam PF00501 AMP-binding enzyme 21 351 1.4E-56 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_2901 83e5fb529badca723ce76d02814ab0c2 451 Pfam PF13193 AMP-binding enzyme C-terminal domain 368 442 9.5E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_2901 83e5fb529badca723ce76d02814ab0c2 451 SUPERFAMILY SSF56801 13 448 1.96E-94 T 14-10-2018 Amir_2901 83e5fb529badca723ce76d02814ab0c2 451 Gene3D G3DSA:3.40.50.12780 14 354 5.5E-81 T 14-10-2018 Amir_2901 83e5fb529badca723ce76d02814ab0c2 451 ProSitePatterns PS00455 Putative AMP-binding domain signature. 158 169 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_0685 be223f7ce85ba46855271cc4e3da0f9e 317 PIRSF PIRSF002849 1 314 9.5E-123 T 14-10-2018 Amir_0685 be223f7ce85ba46855271cc4e3da0f9e 317 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 39 169 5.1E-62 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Amir_0685 be223f7ce85ba46855271cc4e3da0f9e 317 Gene3D G3DSA:3.40.50.300 20 186 5.2E-44 T 14-10-2018 Amir_0685 be223f7ce85ba46855271cc4e3da0f9e 317 Gene3D G3DSA:1.10.8.300 201 309 1.2E-30 T 14-10-2018 Amir_0685 be223f7ce85ba46855271cc4e3da0f9e 317 SUPERFAMILY SSF52540 21 285 8.31E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5422 2d5b89bb3b68fc318bee00a6baa4e288 269 SUPERFAMILY SSF161098 59 242 1.26E-23 T 14-10-2018 IPR035906 MetI-like superfamily Amir_5422 2d5b89bb3b68fc318bee00a6baa4e288 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 248 1.0E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_5422 2d5b89bb3b68fc318bee00a6baa4e288 269 Gene3D G3DSA:1.10.3720.10 57 252 5.2E-19 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 334 1.4E-124 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 367 432 3.3E-25 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 Gene3D G3DSA:2.40.240.60 360 434 1.1E-18 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 Gene3D G3DSA:2.70.210.12 1 158 7.2E-50 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 SUPERFAMILY SSF52540 152 344 1.92E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 SUPERFAMILY SSF82051 4 157 2.09E-46 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 Pfam PF09269 Domain of unknown function (DUF1967) 361 431 1.7E-24 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 SUPERFAMILY SSF102741 361 433 2.62E-20 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 Hamap MF_01454 GTPase Obg [obg]. 3 335 44.131 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 Pfam PF01018 GTP1/OBG 5 157 2.3E-50 T 14-10-2018 IPR006169 GTP1/OBG domain Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 8.1E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 8.1E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 8.1E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 8.1E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 Gene3D G3DSA:3.40.50.300 160 359 1.1E-49 T 14-10-2018 Amir_1189 c5b84d8fc5f2f58de39f4e750f11ce33 488 Pfam PF01926 50S ribosome-binding GTPase 161 288 2.5E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_4096 7573b871797e5d0a8cc6973ff4d131f7 292 SUPERFAMILY SSF109854 19 174 1.83E-15 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_4096 7573b871797e5d0a8cc6973ff4d131f7 292 Gene3D G3DSA:1.20.120.450 11 171 4.0E-9 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_4096 7573b871797e5d0a8cc6973ff4d131f7 292 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 27 235 2.3E-18 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type Amir_4096 7573b871797e5d0a8cc6973ff4d131f7 292 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 29 168 2.3E-9 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 Amir_0956 7515754eda8642d6f2c77a170054339a 434 Gene3D G3DSA:3.30.300.30 332 423 8.7E-20 T 14-10-2018 Amir_0956 7515754eda8642d6f2c77a170054339a 434 Gene3D G3DSA:3.40.50.12780 20 331 2.5E-94 T 14-10-2018 Amir_0956 7515754eda8642d6f2c77a170054339a 434 Pfam PF00501 AMP-binding enzyme 88 288 5.5E-12 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_0956 7515754eda8642d6f2c77a170054339a 434 SUPERFAMILY SSF56801 23 422 6.54E-54 T 14-10-2018 Amir_0956 7515754eda8642d6f2c77a170054339a 434 Pfam PF14535 AMP-binding enzyme C-terminal domain 338 421 1.4E-12 T 14-10-2018 IPR028154 AMP-dependent ligase, C-terminal Amir_4859 7e864270f96d6fc7d13e4678cc779ac1 556 SUPERFAMILY SSF52467 184 345 1.23E-37 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amir_4859 7e864270f96d6fc7d13e4678cc779ac1 556 SUPERFAMILY SSF52518 367 546 5.36E-24 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_4859 7e864270f96d6fc7d13e4678cc779ac1 556 Gene3D G3DSA:3.40.50.970 2 184 5.9E-39 T 14-10-2018 Amir_4859 7e864270f96d6fc7d13e4678cc779ac1 556 Gene3D G3DSA:3.40.50.970 361 553 1.8E-27 T 14-10-2018 Amir_4859 7e864270f96d6fc7d13e4678cc779ac1 556 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 327 1.2E-28 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Amir_4859 7e864270f96d6fc7d13e4678cc779ac1 556 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 383 535 7.4E-17 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amir_4859 7e864270f96d6fc7d13e4678cc779ac1 556 SUPERFAMILY SSF52518 10 183 2.9E-33 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_4859 7e864270f96d6fc7d13e4678cc779ac1 556 Gene3D G3DSA:3.40.50.1220 186 352 1.8E-42 T 14-10-2018 Amir_4859 7e864270f96d6fc7d13e4678cc779ac1 556 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 174 1.4E-33 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Amir_2225 886057bafa5f15649a756dbe203f99a6 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2225 886057bafa5f15649a756dbe203f99a6 209 Pfam PF00072 Response regulator receiver domain 1 109 3.3E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2225 886057bafa5f15649a756dbe203f99a6 209 SMART SM00448 1 109 2.7E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2225 886057bafa5f15649a756dbe203f99a6 209 SUPERFAMILY SSF46894 137 205 5.44E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_2225 886057bafa5f15649a756dbe203f99a6 209 Gene3D G3DSA:3.40.50.12740 1 205 4.7E-64 T 14-10-2018 Amir_2225 886057bafa5f15649a756dbe203f99a6 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 4.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2225 886057bafa5f15649a756dbe203f99a6 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 4.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2225 886057bafa5f15649a756dbe203f99a6 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 4.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2225 886057bafa5f15649a756dbe203f99a6 209 SMART SM00421 143 200 4.2E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2225 886057bafa5f15649a756dbe203f99a6 209 SUPERFAMILY SSF52172 1 127 9.39E-31 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2225 886057bafa5f15649a756dbe203f99a6 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 200 5.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0384 5fda7f15c4c0d3bf5fc585cc1b598686 345 Pfam PF03747 ADP-ribosylglycohydrolase 14 311 4.8E-50 T 14-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 Amir_0384 5fda7f15c4c0d3bf5fc585cc1b598686 345 Gene3D G3DSA:1.10.4080.10 9 335 1.4E-49 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Amir_0384 5fda7f15c4c0d3bf5fc585cc1b598686 345 SUPERFAMILY SSF101478 8 330 1.16E-42 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Amir_1407 6d0848178cc0dd236338e8177529635b 167 SUPERFAMILY SSF55826 13 165 2.62E-31 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Amir_1407 6d0848178cc0dd236338e8177529635b 167 Pfam PF04073 Aminoacyl-tRNA editing domain 35 156 3.3E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Amir_1407 6d0848178cc0dd236338e8177529635b 167 Gene3D G3DSA:3.90.960.10 7 167 1.2E-35 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Amir_4896 18508c0016814ee2c33e89f3661212d3 357 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 12 331 2.7E-70 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Amir_4896 18508c0016814ee2c33e89f3661212d3 357 Gene3D G3DSA:3.20.20.70 10 357 5.8E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_4896 18508c0016814ee2c33e89f3661212d3 357 SUPERFAMILY SSF51395 11 356 1.83E-103 T 14-10-2018 Amir_4468 c221601b0188b0c32e85f319989f4169 597 Gene3D G3DSA:3.30.300.30 464 595 2.8E-5 T 14-10-2018 Amir_4468 c221601b0188b0c32e85f319989f4169 597 Gene3D G3DSA:3.40.50.12780 316 456 1.4E-34 T 14-10-2018 Amir_4468 c221601b0188b0c32e85f319989f4169 597 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4468 c221601b0188b0c32e85f319989f4169 597 Gene3D G3DSA:3.40.50.12780 9 305 2.8E-54 T 14-10-2018 Amir_4468 c221601b0188b0c32e85f319989f4169 597 Pfam PF00501 AMP-binding enzyme 25 466 1.4E-93 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4468 c221601b0188b0c32e85f319989f4169 597 SUPERFAMILY SSF56801 17 595 4.97E-111 T 14-10-2018 Amir_0725 9e8b5975ffffd95978a667d81041662f 69 SUPERFAMILY SSF116842 2 59 6.93E-16 T 14-10-2018 Amir_0725 9e8b5975ffffd95978a667d81041662f 69 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 5 65 13.848 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Amir_0725 9e8b5975ffffd95978a667d81041662f 69 Gene3D G3DSA:1.10.287.1040 2 68 2.0E-14 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 Amir_0725 9e8b5975ffffd95978a667d81041662f 69 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 6 59 1.7E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Amir_0725 9e8b5975ffffd95978a667d81041662f 69 Pfam PF02609 Exonuclease VII small subunit 6 56 2.5E-17 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Amir_0725 9e8b5975ffffd95978a667d81041662f 69 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 4 45 3.0E-11 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Amir_0725 9e8b5975ffffd95978a667d81041662f 69 PIRSF PIRSF006488 1 69 3.6E-23 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Amir_1021 31496156bf5c6f074f5f482810e32693 198 SUPERFAMILY SSF52972 2 193 7.85E-65 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Amir_1021 31496156bf5c6f074f5f482810e32693 198 Gene3D G3DSA:3.90.950.10 1 196 2.0E-70 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Amir_1021 31496156bf5c6f074f5f482810e32693 198 Pfam PF01725 Ham1 family 3 189 3.5E-54 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Amir_1021 31496156bf5c6f074f5f482810e32693 198 Hamap MF_01405 dITP/XTP pyrophosphatase. 1 194 47.948 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Amir_1021 31496156bf5c6f074f5f482810e32693 198 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 2 189 1.6E-48 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Amir_4789 baeef88788a35a029a76303aed31058a 493 SUPERFAMILY SSF58104 119 363 7.94E-54 T 14-10-2018 Amir_4789 baeef88788a35a029a76303aed31058a 493 Gene3D G3DSA:1.10.287.950 71 368 2.4E-51 T 14-10-2018 Amir_4789 baeef88788a35a029a76303aed31058a 493 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 240 269 1.4E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_4789 baeef88788a35a029a76303aed31058a 493 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 141 170 1.4E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_4789 baeef88788a35a029a76303aed31058a 493 SMART SM00283 113 367 1.5E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_4789 baeef88788a35a029a76303aed31058a 493 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 175 333 2.9E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_1863 67b575ecb494d54c727658d328e5cd45 502 Hamap MF_00519 L-arabinose isomerase [araA]. 1 476 62.329 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 Amir_1863 67b575ecb494d54c727658d328e5cd45 502 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 475 8.6E-46 T 14-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 Amir_1863 67b575ecb494d54c727658d328e5cd45 502 PIRSF PIRSF001478 1 499 5.7E-227 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 Amir_1863 67b575ecb494d54c727658d328e5cd45 502 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 8 304 4.0E-121 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 Amir_1863 67b575ecb494d54c727658d328e5cd45 502 SUPERFAMILY SSF53743 5 325 1.31E-115 T 14-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 Amir_1863 67b575ecb494d54c727658d328e5cd45 502 SUPERFAMILY SSF50443 329 497 1.26E-66 T 14-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal Amir_1863 67b575ecb494d54c727658d328e5cd45 502 Gene3D G3DSA:3.40.50.10940 3 175 8.6E-76 T 14-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 Amir_1863 67b575ecb494d54c727658d328e5cd45 502 Pfam PF02610 L-arabinose isomerase 7 359 3.5E-171 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 Amir_3981 afe2a5dbde02328a5c25779cb08e284d 200 SMART SM00347 75 179 6.5E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_3981 afe2a5dbde02328a5c25779cb08e284d 200 Gene3D G3DSA:1.10.10.10 50 197 3.2E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3981 afe2a5dbde02328a5c25779cb08e284d 200 SUPERFAMILY SSF46785 50 192 4.85E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3981 afe2a5dbde02328a5c25779cb08e284d 200 Pfam PF12802 MarR family 82 141 1.7E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_3981 afe2a5dbde02328a5c25779cb08e284d 200 PRINTS PR00598 Bacterial regulatory protein MarR family signature 102 118 1.2E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_3981 afe2a5dbde02328a5c25779cb08e284d 200 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 134 1.2E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_3981 afe2a5dbde02328a5c25779cb08e284d 200 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 154 1.2E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2206 3d3ec52773323b3e33ea2a6706d4ef84 309 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 171 186 1.9E-5 T 14-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 Amir_2206 3d3ec52773323b3e33ea2a6706d4ef84 309 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 230 241 1.9E-5 T 14-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 Amir_2206 3d3ec52773323b3e33ea2a6706d4ef84 309 Pfam PF00717 Peptidase S24-like 173 237 2.8E-7 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Amir_2206 3d3ec52773323b3e33ea2a6706d4ef84 309 SUPERFAMILY SSF51306 170 221 2.98E-7 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Amir_2206 3d3ec52773323b3e33ea2a6706d4ef84 309 TIGRFAM TIGR02228 sigpep_I_arch: signal peptidase I 145 288 6.3E-19 T 14-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 Amir_6082 2550af71990472426d2a15b12170b2c8 167 ProSitePatterns PS01117 MarR-type HTH domain signature. 88 122 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Amir_6082 2550af71990472426d2a15b12170b2c8 167 SUPERFAMILY SSF46785 27 161 1.3E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6082 2550af71990472426d2a15b12170b2c8 167 Gene3D G3DSA:1.10.10.10 24 167 1.5E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6082 2550af71990472426d2a15b12170b2c8 167 SMART SM00347 47 148 2.4E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_6082 2550af71990472426d2a15b12170b2c8 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 105 9.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_6082 2550af71990472426d2a15b12170b2c8 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 109 125 9.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_6082 2550af71990472426d2a15b12170b2c8 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 9.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_6082 2550af71990472426d2a15b12170b2c8 167 Pfam PF01047 MarR family 62 113 1.2E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 423 6.7E-204 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 ProSitePatterns PS00164 Enolase signature. 332 345 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 Pfam PF03952 Enolase, N-terminal domain 4 134 9.2E-56 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 SMART SM01193 4 134 9.5E-85 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 419 7.0E-128 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 SUPERFAMILY SSF51604 138 422 7.35E-127 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 Gene3D G3DSA:3.20.20.120 128 424 1.9E-131 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 PIRSF PIRSF001400 1 422 2.8E-190 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 Hamap MF_00318 Enolase [eno]. 2 409 45.396 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 PRINTS PR00148 Enolase signature 332 346 4.2E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 PRINTS PR00148 Enolase signature 361 378 4.2E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 PRINTS PR00148 Enolase signature 161 174 4.2E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 PRINTS PR00148 Enolase signature 309 320 4.2E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 PRINTS PR00148 Enolase signature 37 51 4.2E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 PRINTS PR00148 Enolase signature 107 123 4.2E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 SMART SM01192 139 423 4.4E-217 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 Gene3D G3DSA:3.30.390.10 1 127 1.0E-52 T 14-10-2018 IPR029017 Enolase-like, N-terminal Amir_0671 559a5e4ad5c1b5e274febd65f034308d 428 SUPERFAMILY SSF54826 4 136 5.74E-51 T 14-10-2018 Amir_4966 e2025b5d714fcea7aeafe790bf825ddb 507 Gene3D G3DSA:2.115.10.20 198 507 1.5E-134 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_4966 e2025b5d714fcea7aeafe790bf825ddb 507 SUPERFAMILY SSF50370 49 188 1.24E-45 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_4966 e2025b5d714fcea7aeafe790bf825ddb 507 Gene3D G3DSA:2.80.10.50 43 90 1.1E-10 T 14-10-2018 Amir_4966 e2025b5d714fcea7aeafe790bf825ddb 507 SUPERFAMILY SSF75005 226 495 1.86E-27 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_4966 e2025b5d714fcea7aeafe790bf825ddb 507 Gene3D G3DSA:2.80.10.50 143 196 9.9E-13 T 14-10-2018 Amir_4966 e2025b5d714fcea7aeafe790bf825ddb 507 Gene3D G3DSA:2.80.10.50 91 142 1.1E-16 T 14-10-2018 Amir_4966 e2025b5d714fcea7aeafe790bf825ddb 507 Pfam PF03664 Glycosyl hydrolase family 62 207 477 1.1E-151 T 14-10-2018 IPR005193 Glycoside hydrolase, family 62, arabinosidase GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 Amir_4966 e2025b5d714fcea7aeafe790bf825ddb 507 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 134 193 5.1E-14 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4966 e2025b5d714fcea7aeafe790bf825ddb 507 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 51 128 1.2E-19 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4966 e2025b5d714fcea7aeafe790bf825ddb 507 SMART SM00458 52 188 1.9E-10 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4390 b288b9e2c40d281d11c2c097346de840 420 SMART SM00560 279 411 5.8E-4 T 14-10-2018 IPR006558 LamG-like jellyroll fold Amir_4390 b288b9e2c40d281d11c2c097346de840 420 SUPERFAMILY SSF51306 35 91 9.68E-8 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Amir_4390 b288b9e2c40d281d11c2c097346de840 420 Gene3D G3DSA:2.60.120.200 212 418 2.3E-24 T 14-10-2018 Amir_4390 b288b9e2c40d281d11c2c097346de840 420 Pfam PF00717 Peptidase S24-like 40 93 3.4E-8 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Amir_4390 b288b9e2c40d281d11c2c097346de840 420 SUPERFAMILY SSF49899 208 418 1.04E-26 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_4390 b288b9e2c40d281d11c2c097346de840 420 TIGRFAM TIGR02228 sigpep_I_arch: signal peptidase I 31 154 2.5E-22 T 14-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 Amir_4390 b288b9e2c40d281d11c2c097346de840 420 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 266 414 2.0E-22 T 14-10-2018 Amir_5420 d21997ead52a9558e23ed2b93d6ef9f7 400 Gene3D G3DSA:3.50.50.60 17 365 2.3E-162 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5420 d21997ead52a9558e23ed2b93d6ef9f7 400 SUPERFAMILY SSF51905 17 395 3.15E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5420 d21997ead52a9558e23ed2b93d6ef9f7 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 16 38 2.6E-23 T 14-10-2018 Amir_5420 d21997ead52a9558e23ed2b93d6ef9f7 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 307 2.6E-23 T 14-10-2018 Amir_5420 d21997ead52a9558e23ed2b93d6ef9f7 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 164 179 2.6E-23 T 14-10-2018 Amir_5420 d21997ead52a9558e23ed2b93d6ef9f7 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 307 323 2.6E-23 T 14-10-2018 Amir_5420 d21997ead52a9558e23ed2b93d6ef9f7 400 Pfam PF01494 FAD binding domain 16 356 2.2E-66 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_5420 d21997ead52a9558e23ed2b93d6ef9f7 400 Gene3D G3DSA:3.30.9.10 85 399 2.3E-162 T 14-10-2018 Amir_5420 d21997ead52a9558e23ed2b93d6ef9f7 400 SUPERFAMILY SSF54373 188 289 2.67E-31 T 14-10-2018 Amir_6195 5085658ea3370abf876a1b66264959e0 420 SUPERFAMILY SSF88946 7 93 6.67E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6195 5085658ea3370abf876a1b66264959e0 420 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 163 3.6E-14 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_6195 5085658ea3370abf876a1b66264959e0 420 Pfam PF08281 Sigma-70, region 4 112 160 4.5E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_6195 5085658ea3370abf876a1b66264959e0 420 Pfam PF04542 Sigma-70 region 2 22 79 5.4E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6195 5085658ea3370abf876a1b66264959e0 420 Gene3D G3DSA:1.10.1740.10 4 82 2.0E-6 T 14-10-2018 Amir_6195 5085658ea3370abf876a1b66264959e0 420 Gene3D G3DSA:1.10.10.10 113 165 1.9E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6195 5085658ea3370abf876a1b66264959e0 420 SUPERFAMILY SSF88659 104 162 1.31E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_0262 a88932c6a32a75d7475d9a24ff50d473 661 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 30 651 5.8E-293 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Amir_0262 a88932c6a32a75d7475d9a24ff50d473 661 Gene3D G3DSA:3.30.300.30 526 657 2.3E-30 T 14-10-2018 Amir_0262 a88932c6a32a75d7475d9a24ff50d473 661 Pfam PF00501 AMP-binding enzyme 95 530 1.4E-92 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_0262 a88932c6a32a75d7475d9a24ff50d473 661 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 35 88 3.1E-23 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Amir_0262 a88932c6a32a75d7475d9a24ff50d473 661 Gene3D G3DSA:3.40.50.12780 64 523 2.1E-106 T 14-10-2018 Amir_0262 a88932c6a32a75d7475d9a24ff50d473 661 ProSitePatterns PS00455 Putative AMP-binding domain signature. 266 277 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_0262 a88932c6a32a75d7475d9a24ff50d473 661 SUPERFAMILY SSF56801 30 650 2.49E-176 T 14-10-2018 Amir_0262 a88932c6a32a75d7475d9a24ff50d473 661 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 16 654 51.062 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Amir_0262 a88932c6a32a75d7475d9a24ff50d473 661 Pfam PF13193 AMP-binding enzyme C-terminal domain 539 620 7.4E-27 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_2299 74cd00cfb48eec85c785a43119e99ba9 378 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 9 127 1.6E-24 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amir_2299 74cd00cfb48eec85c785a43119e99ba9 378 Gene3D G3DSA:3.40.50.720 3 141 6.4E-42 T 14-10-2018 Amir_2299 74cd00cfb48eec85c785a43119e99ba9 378 Gene3D G3DSA:3.30.360.10 142 378 1.5E-73 T 14-10-2018 Amir_2299 74cd00cfb48eec85c785a43119e99ba9 378 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 149 271 1.1E-9 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Amir_2299 74cd00cfb48eec85c785a43119e99ba9 378 SUPERFAMILY SSF55347 143 301 5.89E-39 T 14-10-2018 Amir_2299 74cd00cfb48eec85c785a43119e99ba9 378 SUPERFAMILY SSF51735 4 169 1.4E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1009 a20291d8df160fbf241ac63b57dc692e 151 Gene3D G3DSA:3.40.140.10 1 142 9.5E-37 T 14-10-2018 Amir_1009 a20291d8df160fbf241ac63b57dc692e 151 SUPERFAMILY SSF102712 2 130 1.11E-28 T 14-10-2018 Amir_1009 a20291d8df160fbf241ac63b57dc692e 151 Pfam PF14464 Prokaryotic homologs of the JAB domain 7 120 6.8E-26 T 14-10-2018 IPR028090 JAB domain, prokaryotic Amir_1009 a20291d8df160fbf241ac63b57dc692e 151 SMART SM00232 1 136 1.7E-25 T 14-10-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 Amir_1775 87f1dac35ba7a1b4658cca01eec53a51 312 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 70 298 5.2E-55 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_1775 87f1dac35ba7a1b4658cca01eec53a51 312 SUPERFAMILY SSF53850 6 298 1.74E-51 T 14-10-2018 Amir_1775 87f1dac35ba7a1b4658cca01eec53a51 312 Gene3D G3DSA:3.40.190.10 156 259 2.4E-61 T 14-10-2018 Amir_1775 87f1dac35ba7a1b4658cca01eec53a51 312 Gene3D G3DSA:3.40.190.10 67 290 2.4E-61 T 14-10-2018 Amir_1775 87f1dac35ba7a1b4658cca01eec53a51 312 SMART SM00062 69 301 1.1E-41 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_0072 cc479721e4ca56cfd54380e78a58bf52 141 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 76 117 5.3E-11 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Amir_0072 cc479721e4ca56cfd54380e78a58bf52 141 Pfam PF12728 Helix-turn-helix domain 76 119 5.1E-10 T 14-10-2018 Amir_0072 cc479721e4ca56cfd54380e78a58bf52 141 Gene3D G3DSA:1.10.1660.10 70 122 4.4E-6 T 14-10-2018 Amir_0072 cc479721e4ca56cfd54380e78a58bf52 141 SUPERFAMILY SSF46955 76 129 4.39E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_6790 fe8ed05157390cd1a1dc95043e935f4d 487 Pfam PF00155 Aminotransferase class I and II 152 464 1.4E-29 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_6790 fe8ed05157390cd1a1dc95043e935f4d 487 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 68 84 5.6E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_6790 fe8ed05157390cd1a1dc95043e935f4d 487 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 68 5.6E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_6790 fe8ed05157390cd1a1dc95043e935f4d 487 Gene3D G3DSA:3.90.1150.10 367 465 1.1E-79 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_6790 fe8ed05157390cd1a1dc95043e935f4d 487 Gene3D G3DSA:3.40.640.10 151 366 1.1E-79 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_6790 fe8ed05157390cd1a1dc95043e935f4d 487 Gene3D G3DSA:1.10.10.10 29 96 1.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6790 fe8ed05157390cd1a1dc95043e935f4d 487 SMART SM00345 35 94 3.7E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_6790 fe8ed05157390cd1a1dc95043e935f4d 487 SUPERFAMILY SSF53383 112 465 2.95E-78 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_6790 fe8ed05157390cd1a1dc95043e935f4d 487 Pfam PF00392 Bacterial regulatory proteins, gntR family 34 93 1.1E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_6790 fe8ed05157390cd1a1dc95043e935f4d 487 SUPERFAMILY SSF46785 33 98 1.24E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4935 18106bb7bc625360f0089706cb97fc3c 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 218 4.2E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4935 18106bb7bc625360f0089706cb97fc3c 221 Gene3D G3DSA:1.10.10.10 123 221 1.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4935 18106bb7bc625360f0089706cb97fc3c 221 SUPERFAMILY SSF52172 3 177 7.07E-37 T 14-10-2018 IPR011006 CheY-like superfamily Amir_4935 18106bb7bc625360f0089706cb97fc3c 221 SMART SM00862 147 218 7.3E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4935 18106bb7bc625360f0089706cb97fc3c 221 Pfam PF00072 Response regulator receiver domain 4 114 1.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4935 18106bb7bc625360f0089706cb97fc3c 221 SMART SM00448 2 113 2.6E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4935 18106bb7bc625360f0089706cb97fc3c 221 Gene3D G3DSA:3.40.50.2300 1 121 3.7E-34 T 14-10-2018 Amir_1224 8d4ac55b4b3280d1f0cf83a62d5863bf 255 SUPERFAMILY SSF52096 6 253 8.89E-68 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_1224 8d4ac55b4b3280d1f0cf83a62d5863bf 255 Gene3D G3DSA:3.90.226.10 1 197 6.6E-55 T 14-10-2018 Amir_1224 8d4ac55b4b3280d1f0cf83a62d5863bf 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 252 2.8E-46 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Amir_1224 8d4ac55b4b3280d1f0cf83a62d5863bf 255 Gene3D G3DSA:1.10.12.10 200 255 4.5E-14 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Amir_0112 84b56686b017ec92f2cdef107450a14c 116 SUPERFAMILY SSF55486 4 115 3.1E-39 T 14-10-2018 Amir_0112 84b56686b017ec92f2cdef107450a14c 116 Pfam PF06262 Zincin-like metallopeptidase 29 115 7.1E-34 T 14-10-2018 IPR010428 Zincin-like metallopeptidase Amir_0112 84b56686b017ec92f2cdef107450a14c 116 Gene3D G3DSA:3.30.2010.20 2 115 1.2E-44 T 14-10-2018 IPR038555 Zincin-like metallopeptidase superfamily Amir_4488 ab9a621b6ef7d17e7d15749f571b43c8 422 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 13 347 7.1E-111 T 14-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase Amir_4488 ab9a621b6ef7d17e7d15749f571b43c8 422 SUPERFAMILY SSF51905 11 236 5.83E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4488 ab9a621b6ef7d17e7d15749f571b43c8 422 Gene3D G3DSA:3.50.50.60 4 422 4.6E-140 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4488 ab9a621b6ef7d17e7d15749f571b43c8 422 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 200 225 1.7E-5 T 14-10-2018 Amir_4488 ab9a621b6ef7d17e7d15749f571b43c8 422 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 13 35 1.7E-5 T 14-10-2018 Amir_4488 ab9a621b6ef7d17e7d15749f571b43c8 422 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 169 1.7E-5 T 14-10-2018 Amir_4488 ab9a621b6ef7d17e7d15749f571b43c8 422 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 4.7E-9 T 14-10-2018 Amir_4488 ab9a621b6ef7d17e7d15749f571b43c8 422 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 4.7E-9 T 14-10-2018 Amir_4488 ab9a621b6ef7d17e7d15749f571b43c8 422 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 200 218 4.7E-9 T 14-10-2018 Amir_4488 ab9a621b6ef7d17e7d15749f571b43c8 422 SUPERFAMILY SSF51905 199 419 5.96E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6890 1241cfd94e0b67508ca78a6b727ebb2a 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 162 7.9E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_6890 1241cfd94e0b67508ca78a6b727ebb2a 175 Pfam PF08281 Sigma-70, region 4 111 161 2.6E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_6890 1241cfd94e0b67508ca78a6b727ebb2a 175 Gene3D G3DSA:1.10.10.10 102 170 1.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6890 1241cfd94e0b67508ca78a6b727ebb2a 175 SUPERFAMILY SSF88946 4 97 3.66E-17 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6890 1241cfd94e0b67508ca78a6b727ebb2a 175 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 4 166 6.2E-44 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 Amir_6890 1241cfd94e0b67508ca78a6b727ebb2a 175 Gene3D G3DSA:1.10.1740.10 1 100 4.2E-10 T 14-10-2018 Amir_6890 1241cfd94e0b67508ca78a6b727ebb2a 175 SUPERFAMILY SSF88659 105 165 1.16E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_6890 1241cfd94e0b67508ca78a6b727ebb2a 175 Pfam PF04542 Sigma-70 region 2 16 79 1.5E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_2918 7d28440182d4b0317655264251f58ba2 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 282 1.8E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_2918 7d28440182d4b0317655264251f58ba2 290 SUPERFAMILY SSF161098 20 290 2.49E-70 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2918 7d28440182d4b0317655264251f58ba2 290 Gene3D G3DSA:1.10.3720.10 17 281 6.9E-67 T 14-10-2018 IPR035906 MetI-like superfamily Amir_5127 cf0ab7378edee5ab2dc55e06f25fce44 298 Pfam PF03466 LysR substrate binding domain 87 275 9.7E-14 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_5127 cf0ab7378edee5ab2dc55e06f25fce44 298 Gene3D G3DSA:3.40.190.10 162 254 3.5E-17 T 14-10-2018 Amir_5127 cf0ab7378edee5ab2dc55e06f25fce44 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_5127 cf0ab7378edee5ab2dc55e06f25fce44 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_5127 cf0ab7378edee5ab2dc55e06f25fce44 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_5127 cf0ab7378edee5ab2dc55e06f25fce44 298 Gene3D G3DSA:3.40.190.10 101 273 3.5E-17 T 14-10-2018 Amir_5127 cf0ab7378edee5ab2dc55e06f25fce44 298 SUPERFAMILY SSF53850 89 277 2.82E-16 T 14-10-2018 Amir_5127 cf0ab7378edee5ab2dc55e06f25fce44 298 Gene3D G3DSA:1.10.10.10 1 87 8.9E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5127 cf0ab7378edee5ab2dc55e06f25fce44 298 SUPERFAMILY SSF46785 4 88 1.23E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5127 cf0ab7378edee5ab2dc55e06f25fce44 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.2E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_1833 2c0b667dad476de7083b2806471c0682 370 Gene3D G3DSA:1.10.10.10 55 140 7.8E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1833 2c0b667dad476de7083b2806471c0682 370 Pfam PF04542 Sigma-70 region 2 2 59 4.7E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_1833 2c0b667dad476de7083b2806471c0682 370 SUPERFAMILY SSF88659 80 137 9.81E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_1833 2c0b667dad476de7083b2806471c0682 370 Pfam PF08281 Sigma-70, region 4 86 135 3.3E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_1833 2c0b667dad476de7083b2806471c0682 370 SUPERFAMILY SSF88946 2 78 5.89E-10 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_3651 b216a9e68d3e9cfb406a1c4559e28590 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 80 174 9.1E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_3651 b216a9e68d3e9cfb406a1c4559e28590 219 Pfam PF13242 HAD-hyrolase-like 135 207 5.9E-10 T 14-10-2018 Amir_3651 b216a9e68d3e9cfb406a1c4559e28590 219 SUPERFAMILY SSF56784 3 208 6.58E-33 T 14-10-2018 IPR036412 HAD-like superfamily Amir_3651 b216a9e68d3e9cfb406a1c4559e28590 219 Gene3D G3DSA:3.40.50.1000 1 216 4.9E-27 T 14-10-2018 IPR023214 HAD superfamily Amir_2418 379fa7e44cc7828831c6e444c3e28c0a 752 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 14 750 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Amir_2418 379fa7e44cc7828831c6e444c3e28c0a 752 SUPERFAMILY SSF51998 12 750 1.53E-270 T 14-10-2018 Amir_2418 379fa7e44cc7828831c6e444c3e28c0a 752 Gene3D G3DSA:3.20.70.20 10 752 3.5E-293 T 14-10-2018 Amir_2418 379fa7e44cc7828831c6e444c3e28c0a 752 Pfam PF01228 Glycine radical 627 733 1.6E-39 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 Amir_2418 379fa7e44cc7828831c6e444c3e28c0a 752 ProSitePatterns PS00850 Glycine radical domain signature. 722 730 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Amir_2418 379fa7e44cc7828831c6e444c3e28c0a 752 Pfam PF02901 Pyruvate formate lyase-like 26 611 4.6E-195 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 Amir_2418 379fa7e44cc7828831c6e444c3e28c0a 752 PIRSF PIRSF000379 12 752 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Amir_2363 0788577979a6893b8bd65da38f4d1ccc 126 Pfam PF00072 Response regulator receiver domain 11 117 6.9E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2363 0788577979a6893b8bd65da38f4d1ccc 126 SMART SM00448 9 119 2.3E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2363 0788577979a6893b8bd65da38f4d1ccc 126 SUPERFAMILY SSF52172 8 123 2.7E-21 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2363 0788577979a6893b8bd65da38f4d1ccc 126 Gene3D G3DSA:3.40.50.2300 5 125 7.8E-21 T 14-10-2018 Amir_3299 1c3740137bbfd98a316decb183fca75c 280 Gene3D G3DSA:1.10.260.40 16 83 3.8E-6 T 14-10-2018 Amir_3299 1c3740137bbfd98a316decb183fca75c 280 Gene3D G3DSA:3.30.450.180 109 273 1.5E-11 T 14-10-2018 Amir_3299 1c3740137bbfd98a316decb183fca75c 280 SMART SM00530 6 82 1.3E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_3299 1c3740137bbfd98a316decb183fca75c 280 SUPERFAMILY SSF47413 30 83 3.31E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3299 1c3740137bbfd98a316decb183fca75c 280 Pfam PF13560 Helix-turn-helix domain 15 85 2.9E-12 T 14-10-2018 Amir_5932 e141e0470eff5b7c3be0631a46452718 787 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 787 68.528 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Amir_5932 e141e0470eff5b7c3be0631a46452718 787 PIRSF PIRSF006288 2 606 7.2E-146 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Amir_5932 e141e0470eff5b7c3be0631a46452718 787 PIRSF PIRSF006288 589 783 3.8E-29 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Amir_5932 e141e0470eff5b7c3be0631a46452718 787 Gene3D G3DSA:1.10.3210.10 419 531 2.5E-6 T 14-10-2018 Amir_5932 e141e0470eff5b7c3be0631a46452718 787 Pfam PF01966 HD domain 434 520 2.3E-9 T 14-10-2018 IPR006674 HD domain Amir_5932 e141e0470eff5b7c3be0631a46452718 787 SUPERFAMILY SSF81891 340 571 2.16E-15 T 14-10-2018 Amir_5932 e141e0470eff5b7c3be0631a46452718 787 SUPERFAMILY SSF81593 191 283 3.22E-5 T 14-10-2018 Amir_5932 e141e0470eff5b7c3be0631a46452718 787 Gene3D G3DSA:3.30.460.100 2 135 2.0E-5 T 14-10-2018 Amir_5932 e141e0470eff5b7c3be0631a46452718 787 SUPERFAMILY SSF55021 612 681 3.82E-7 T 14-10-2018 Amir_5932 e141e0470eff5b7c3be0631a46452718 787 SMART SM00471 429 562 1.1E-6 T 14-10-2018 IPR003607 HD/PDEase domain Amir_5932 e141e0470eff5b7c3be0631a46452718 787 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 22 594 1.6E-162 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Amir_5932 e141e0470eff5b7c3be0631a46452718 787 SUPERFAMILY SSF55021 719 776 3.29E-8 T 14-10-2018 Amir_5932 e141e0470eff5b7c3be0631a46452718 787 SUPERFAMILY SSF81301 29 160 6.54E-15 T 14-10-2018 Amir_6564 5cf95d5cb8e7e7431ec691e31c296c5e 216 Pfam PF00380 Ribosomal protein S9/S16 96 216 2.8E-44 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Amir_6564 5cf95d5cb8e7e7431ec691e31c296c5e 216 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 87 216 32.597 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Amir_6564 5cf95d5cb8e7e7431ec691e31c296c5e 216 SUPERFAMILY SSF54211 92 216 8.34E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_6564 5cf95d5cb8e7e7431ec691e31c296c5e 216 ProSitePatterns PS00360 Ribosomal protein S9 signature. 155 173 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Amir_6564 5cf95d5cb8e7e7431ec691e31c296c5e 216 Gene3D G3DSA:3.30.230.10 90 216 5.8E-49 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amir_3050 d0f9a0fff16ff27080f773e4c10c2dea 119 Pfam PF12680 SnoaL-like domain 17 85 5.5E-8 T 14-10-2018 IPR037401 SnoaL-like domain Amir_3050 d0f9a0fff16ff27080f773e4c10c2dea 119 SUPERFAMILY SSF54427 8 114 3.73E-20 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_3050 d0f9a0fff16ff27080f773e4c10c2dea 119 Gene3D G3DSA:3.10.450.50 9 117 1.4E-21 T 14-10-2018 Amir_3240 18e429dcac04e2e00edc27cb27b0a7d3 582 SUPERFAMILY SSF53041 25 174 3.79E-11 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Amir_3240 18e429dcac04e2e00edc27cb27b0a7d3 582 SMART SM00857 24 174 7.8E-5 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amir_3240 18e429dcac04e2e00edc27cb27b0a7d3 582 Pfam PF07508 Recombinase 200 253 1.5E-7 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Amir_3240 18e429dcac04e2e00edc27cb27b0a7d3 582 Gene3D G3DSA:3.40.50.1390 23 180 3.5E-15 T 14-10-2018 Amir_3240 18e429dcac04e2e00edc27cb27b0a7d3 582 Pfam PF00239 Resolvase, N terminal domain 25 173 3.4E-9 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amir_4932 dcf549e128c272e43aca93d51e01ac17 383 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 374 3.8E-134 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 Amir_4932 dcf549e128c272e43aca93d51e01ac17 383 Pfam PF02595 Glycerate kinase family 3 373 5.7E-131 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 Amir_4932 dcf549e128c272e43aca93d51e01ac17 383 SUPERFAMILY SSF110738 1 375 5.36E-115 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 Amir_4932 dcf549e128c272e43aca93d51e01ac17 383 Gene3D G3DSA:3.40.50.10350 1 359 1.1E-121 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold Amir_4932 dcf549e128c272e43aca93d51e01ac17 383 Gene3D G3DSA:3.90.1510.10 42 276 1.1E-121 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 Amir_4932 dcf549e128c272e43aca93d51e01ac17 383 PIRSF PIRSF006078 1 377 2.8E-107 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 Amir_5977 3839695452e23e3fbd96fdbeec9a86ea 733 Pfam PF00270 DEAD/DEAH box helicase 295 449 5.6E-16 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amir_5977 3839695452e23e3fbd96fdbeec9a86ea 733 Gene3D G3DSA:3.40.50.300 472 662 1.0E-51 T 14-10-2018 Amir_5977 3839695452e23e3fbd96fdbeec9a86ea 733 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 24 696 4.9E-203 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 Amir_5977 3839695452e23e3fbd96fdbeec9a86ea 733 SUPERFAMILY SSF52540 404 630 7.75E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5977 3839695452e23e3fbd96fdbeec9a86ea 733 SUPERFAMILY SSF52540 190 466 9.91E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5977 3839695452e23e3fbd96fdbeec9a86ea 733 SUPERFAMILY SSF50249 12 184 9.94E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_5977 3839695452e23e3fbd96fdbeec9a86ea 733 SMART SM00487 270 473 3.7E-29 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_5977 3839695452e23e3fbd96fdbeec9a86ea 733 SMART SM00490 536 621 9.7E-21 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_5977 3839695452e23e3fbd96fdbeec9a86ea 733 Pfam PF17191 RecG wedge domain 13 180 1.0E-11 T 14-10-2018 IPR033454 RecG, wedge domain Amir_5977 3839695452e23e3fbd96fdbeec9a86ea 733 Gene3D G3DSA:2.40.50.140 43 140 8.4E-19 T 14-10-2018 Amir_5977 3839695452e23e3fbd96fdbeec9a86ea 733 Gene3D G3DSA:3.40.50.300 219 463 8.6E-82 T 14-10-2018 Amir_5977 3839695452e23e3fbd96fdbeec9a86ea 733 Pfam PF00271 Helicase conserved C-terminal domain 548 620 6.0E-17 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_1487 ed7118cd7157db5f1ac2b8f2d78a1c1b 330 SMART SM01130 2 295 7.8E-67 T 14-10-2018 IPR002220 DapA-like GO:0016829 Amir_1487 ed7118cd7157db5f1ac2b8f2d78a1c1b 330 Pfam PF00701 Dihydrodipicolinate synthetase family 3 292 2.4E-49 T 14-10-2018 IPR002220 DapA-like GO:0016829 Amir_1487 ed7118cd7157db5f1ac2b8f2d78a1c1b 330 Gene3D G3DSA:3.20.20.70 1 303 5.3E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_1487 ed7118cd7157db5f1ac2b8f2d78a1c1b 330 PIRSF PIRSF001365 1 306 3.5E-51 T 14-10-2018 IPR002220 DapA-like GO:0016829 Amir_1487 ed7118cd7157db5f1ac2b8f2d78a1c1b 330 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 2 296 43.921 T 14-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 Amir_1487 ed7118cd7157db5f1ac2b8f2d78a1c1b 330 SUPERFAMILY SSF51569 2 289 3.66E-61 T 14-10-2018 Amir_1598 2c8c91b4d673eeea8d5cd8b6431471c6 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 379 1.3E-38 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_1598 2c8c91b4d673eeea8d5cd8b6431471c6 381 Gene3D G3DSA:1.10.540.10 3 122 3.1E-30 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_1598 2c8c91b4d673eeea8d5cd8b6431471c6 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 126 138 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amir_1598 2c8c91b4d673eeea8d5cd8b6431471c6 381 SUPERFAMILY SSF56645 4 243 1.96E-75 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_1598 2c8c91b4d673eeea8d5cd8b6431471c6 381 SUPERFAMILY SSF47203 229 379 1.3E-42 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_1598 2c8c91b4d673eeea8d5cd8b6431471c6 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 120 2.3E-26 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_1598 2c8c91b4d673eeea8d5cd8b6431471c6 381 Gene3D G3DSA:1.20.140.10 237 380 2.5E-39 T 14-10-2018 Amir_1598 2c8c91b4d673eeea8d5cd8b6431471c6 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 219 2.8E-25 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amir_1598 2c8c91b4d673eeea8d5cd8b6431471c6 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 338 357 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amir_1598 2c8c91b4d673eeea8d5cd8b6431471c6 381 Gene3D G3DSA:2.40.110.10 123 236 1.5E-40 T 14-10-2018 Amir_3590 5466f6eb91672f6997d85c3cb078e609 118 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 114 34.959 T 14-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 Amir_3590 5466f6eb91672f6997d85c3cb078e609 118 Pfam PF02553 Cobalt transport protein component CbiN 7 74 5.9E-26 T 14-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 Amir_6436 357840a0120d60bd01d70b770fad58eb 218 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 119 174 8.8E-10 T 14-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF Amir_6436 357840a0120d60bd01d70b770fad58eb 218 Pfam PF08044 Domain of unknown function (DUF1707) 12 63 2.4E-22 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 Amir_1198 c7af045bef8cdecb9428a348e518cb75 148 Gene3D G3DSA:3.30.460.10 1 112 1.5E-39 T 14-10-2018 Amir_1198 c7af045bef8cdecb9428a348e518cb75 148 SUPERFAMILY SSF81301 8 117 3.76E-39 T 14-10-2018 Amir_1198 c7af045bef8cdecb9428a348e518cb75 148 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 13 108 6.2E-32 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Amir_1198 c7af045bef8cdecb9428a348e518cb75 148 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 4 109 23.95 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Amir_1198 c7af045bef8cdecb9428a348e518cb75 148 Pfam PF02410 Ribosomal silencing factor during starvation 15 108 1.2E-23 T 14-10-2018 Amir_2118 d03494797f466b8f112ba7a56c5c59a9 153 SUPERFAMILY SSF54637 3 135 8.69E-31 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_2118 d03494797f466b8f112ba7a56c5c59a9 153 Pfam PF03061 Thioesterase superfamily 23 100 3.0E-8 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Amir_2118 d03494797f466b8f112ba7a56c5c59a9 153 Gene3D G3DSA:3.10.129.10 2 137 1.1E-30 T 14-10-2018 Amir_2118 d03494797f466b8f112ba7a56c5c59a9 153 PIRSF PIRSF003230 1 140 7.1E-20 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Amir_6490 cf1455ce54d904c3076e2f801a8fce37 243 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 61 2.6E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6490 cf1455ce54d904c3076e2f801a8fce37 243 Gene3D G3DSA:1.10.357.10 2 242 5.4E-61 T 14-10-2018 Amir_6490 cf1455ce54d904c3076e2f801a8fce37 243 SUPERFAMILY SSF46689 5 78 8.25E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_6490 cf1455ce54d904c3076e2f801a8fce37 243 SUPERFAMILY SSF48498 90 241 2.22E-23 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_6977 181b8d02e6342055e56093e85568cf54 404 SUPERFAMILY SSF47203 250 400 4.67E-49 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_6977 181b8d02e6342055e56093e85568cf54 404 SUPERFAMILY SSF56645 5 234 9.29E-55 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_6977 181b8d02e6342055e56093e85568cf54 404 Gene3D G3DSA:2.40.110.10 125 238 2.5E-31 T 14-10-2018 Amir_6977 181b8d02e6342055e56093e85568cf54 404 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 250 398 2.5E-48 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_6977 181b8d02e6342055e56093e85568cf54 404 Gene3D G3DSA:1.10.540.10 2 117 2.3E-19 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_6977 181b8d02e6342055e56093e85568cf54 404 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 357 376 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amir_6977 181b8d02e6342055e56093e85568cf54 404 Gene3D G3DSA:1.20.140.10 252 403 6.6E-47 T 14-10-2018 Amir_6977 181b8d02e6342055e56093e85568cf54 404 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 223 1.3E-22 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amir_6977 181b8d02e6342055e56093e85568cf54 404 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 115 3.2E-15 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_1413 70d0b96bd09b8e6dd60fe15b83c5f8d5 1606 SMART SM00487 16 233 9.9E-38 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_1413 70d0b96bd09b8e6dd60fe15b83c5f8d5 1606 SUPERFAMILY SSF52540 29 427 2.15E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1413 70d0b96bd09b8e6dd60fe15b83c5f8d5 1606 SMART SM00382 33 409 3.6E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1413 70d0b96bd09b8e6dd60fe15b83c5f8d5 1606 Pfam PF00270 DEAD/DEAH box helicase 21 206 7.0E-26 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amir_1413 70d0b96bd09b8e6dd60fe15b83c5f8d5 1606 SMART SM00490 289 422 2.0E-13 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_1413 70d0b96bd09b8e6dd60fe15b83c5f8d5 1606 Gene3D G3DSA:3.40.50.300 3 220 1.8E-57 T 14-10-2018 Amir_1413 70d0b96bd09b8e6dd60fe15b83c5f8d5 1606 Pfam PF08494 DEAD/H associated 685 878 9.9E-78 T 14-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 Amir_1413 70d0b96bd09b8e6dd60fe15b83c5f8d5 1606 Pfam PF00271 Helicase conserved C-terminal domain 357 422 3.7E-12 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_7091 9a33a8c6949f4b08c1bc4c43e889c326 314 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 312 27.953 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_7091 9a33a8c6949f4b08c1bc4c43e889c326 314 Gene3D G3DSA:3.30.470.20 86 307 2.8E-53 T 14-10-2018 Amir_7091 9a33a8c6949f4b08c1bc4c43e889c326 314 Gene3D G3DSA:3.40.50.20 2 85 5.4E-23 T 14-10-2018 Amir_7091 9a33a8c6949f4b08c1bc4c43e889c326 314 Pfam PF07478 D-ala D-ala ligase C-terminus 106 309 5.9E-42 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_7091 9a33a8c6949f4b08c1bc4c43e889c326 314 SUPERFAMILY SSF52440 6 97 2.59E-21 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amir_7091 9a33a8c6949f4b08c1bc4c43e889c326 314 Gene3D G3DSA:3.30.1490.20 112 185 2.8E-53 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amir_7091 9a33a8c6949f4b08c1bc4c43e889c326 314 PIRSF PIRSF039102 36 314 3.1E-63 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_7091 9a33a8c6949f4b08c1bc4c43e889c326 314 PIRSF PIRSF039102 2 52 8.9E-7 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_7091 9a33a8c6949f4b08c1bc4c43e889c326 314 Pfam PF01820 D-ala D-ala ligase N-terminus 6 86 1.9E-13 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_7091 9a33a8c6949f4b08c1bc4c43e889c326 314 SUPERFAMILY SSF56059 97 308 2.3E-45 T 14-10-2018 Amir_1982 f3bd3c922afb50d7e5763dd1da28f292 807 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 31 358 7.8E-68 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_1982 f3bd3c922afb50d7e5763dd1da28f292 807 Gene3D G3DSA:3.20.20.300 20 377 1.8E-95 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Amir_1982 f3bd3c922afb50d7e5763dd1da28f292 807 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 400 635 9.7E-48 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 Amir_1982 f3bd3c922afb50d7e5763dd1da28f292 807 SUPERFAMILY SSF52279 400 638 1.11E-45 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Amir_1982 f3bd3c922afb50d7e5763dd1da28f292 807 PRINTS PR00133 Glycosyl hydrolase family 3 signature 108 124 7.9E-17 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_1982 f3bd3c922afb50d7e5763dd1da28f292 807 PRINTS PR00133 Glycosyl hydrolase family 3 signature 131 150 7.9E-17 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_1982 f3bd3c922afb50d7e5763dd1da28f292 807 PRINTS PR00133 Glycosyl hydrolase family 3 signature 208 224 7.9E-17 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_1982 f3bd3c922afb50d7e5763dd1da28f292 807 PRINTS PR00133 Glycosyl hydrolase family 3 signature 177 193 7.9E-17 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_1982 f3bd3c922afb50d7e5763dd1da28f292 807 PRINTS PR00133 Glycosyl hydrolase family 3 signature 279 297 7.9E-17 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_1982 f3bd3c922afb50d7e5763dd1da28f292 807 Gene3D G3DSA:3.40.50.1700 387 636 2.3E-61 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Amir_1982 f3bd3c922afb50d7e5763dd1da28f292 807 Pfam PF14310 Fibronectin type III-like domain 672 741 2.5E-16 T 14-10-2018 IPR026891 Fibronectin type III-like domain Amir_1982 f3bd3c922afb50d7e5763dd1da28f292 807 Gene3D G3DSA:2.60.40.10 643 759 1.9E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_1982 f3bd3c922afb50d7e5763dd1da28f292 807 SUPERFAMILY SSF51445 11 399 5.58E-91 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1982 f3bd3c922afb50d7e5763dd1da28f292 807 SMART SM01217 672 741 3.0E-22 T 14-10-2018 IPR026891 Fibronectin type III-like domain Amir_3949 24d2303e69f8796bee10f829a6aa1545 210 SUPERFAMILY SSF46689 5 60 3.73E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3949 24d2303e69f8796bee10f829a6aa1545 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3949 24d2303e69f8796bee10f829a6aa1545 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3949 24d2303e69f8796bee10f829a6aa1545 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 58 3.4E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3949 24d2303e69f8796bee10f829a6aa1545 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 60 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_3949 24d2303e69f8796bee10f829a6aa1545 210 Gene3D G3DSA:1.10.357.10 3 198 3.0E-51 T 14-10-2018 Amir_5929 36558bec93baec91394ccc15b43fbe2b 356 SUPERFAMILY SSF51556 46 319 2.08E-60 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_5929 36558bec93baec91394ccc15b43fbe2b 356 Gene3D G3DSA:3.20.20.140 48 319 1.6E-51 T 14-10-2018 Amir_5929 36558bec93baec91394ccc15b43fbe2b 356 Gene3D G3DSA:2.30.40.10 31 355 1.6E-51 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_5929 36558bec93baec91394ccc15b43fbe2b 356 Pfam PF01979 Amidohydrolase family 164 355 1.1E-11 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_5882 05913a0fb2fee8f2a546016f2b11937c 299 Pfam PF00892 EamA-like transporter family 8 131 1.4E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amir_5882 05913a0fb2fee8f2a546016f2b11937c 299 Pfam PF00892 EamA-like transporter family 142 276 1.6E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amir_5882 05913a0fb2fee8f2a546016f2b11937c 299 SUPERFAMILY SSF103481 177 284 8.11E-9 T 14-10-2018 Amir_5882 05913a0fb2fee8f2a546016f2b11937c 299 SUPERFAMILY SSF103481 38 133 5.1E-11 T 14-10-2018 Amir_2983 deac03d4c2a00aea5242c7dd7cd92303 425 Gene3D G3DSA:3.40.190.10 153 407 1.2E-67 T 14-10-2018 Amir_2983 deac03d4c2a00aea5242c7dd7cd92303 425 Pfam PF13416 Bacterial extracellular solute-binding protein 49 359 1.1E-29 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_2983 deac03d4c2a00aea5242c7dd7cd92303 425 SUPERFAMILY SSF53850 18 420 1.28E-69 T 14-10-2018 Amir_2983 deac03d4c2a00aea5242c7dd7cd92303 425 Gene3D G3DSA:3.40.190.10 59 378 1.2E-67 T 14-10-2018 Amir_3428 83af618006b423f9182c7162dab6325d 93 SMART SM01012 27 82 1.4E-13 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_3428 83af618006b423f9182c7162dab6325d 93 Gene3D G3DSA:1.10.10.10 29 87 1.9E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3428 83af618006b423f9182c7162dab6325d 93 Pfam PF03861 ANTAR domain 30 82 3.0E-14 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_1897 54908d36a8ce1a1fdcc8969dd8dfd7d2 242 Pfam PF14428 SCP1.201-like deaminase 114 236 3.7E-38 T 14-10-2018 IPR032724 Deaminase, SCP1.201-like Amir_6372 286bcf06967e6df9cabfcde1db916a23 407 SUPERFAMILY SSF48452 73 358 1.98E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6372 286bcf06967e6df9cabfcde1db916a23 407 Gene3D G3DSA:1.25.40.10 59 207 9.9E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2285 27dd44a2c01fb926d427961b1991e235 197 Gene3D G3DSA:3.40.50.360 1 175 5.4E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Amir_2285 27dd44a2c01fb926d427961b1991e235 197 TIGRFAM TIGR04037 LLM_duo_CE1759: LLM-partnered FMN reductase, CE1759 family 4 193 1.0E-79 T 14-10-2018 IPR023932 Uncharacterised protein family, CE1759 Amir_2285 27dd44a2c01fb926d427961b1991e235 197 Pfam PF03358 NADPH-dependent FMN reductase 2 151 5.6E-35 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Amir_2285 27dd44a2c01fb926d427961b1991e235 197 SUPERFAMILY SSF52218 3 175 1.86E-29 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Amir_5510 48b640d434573269eb4ca74ad4f60220 205 Gene3D G3DSA:3.30.70.1230 20 188 2.6E-6 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_5510 48b640d434573269eb4ca74ad4f60220 205 SUPERFAMILY SSF55073 22 140 6.44E-8 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_6729 01f6bde1d0cdc06b375d4b16a6756bbc 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 227 243 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amir_6729 01f6bde1d0cdc06b375d4b16a6756bbc 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 4 301 33.874 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amir_6729 01f6bde1d0cdc06b375d4b16a6756bbc 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 5 207 8.9E-66 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amir_6729 01f6bde1d0cdc06b375d4b16a6756bbc 313 Gene3D G3DSA:3.40.190.10 5 210 3.5E-72 T 14-10-2018 Amir_6729 01f6bde1d0cdc06b375d4b16a6756bbc 313 PIRSF PIRSF001438 1 313 5.8E-103 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amir_6729 01f6bde1d0cdc06b375d4b16a6756bbc 313 Gene3D G3DSA:3.40.190.10 95 194 3.5E-72 T 14-10-2018 Amir_6729 01f6bde1d0cdc06b375d4b16a6756bbc 313 PRINTS PR00151 Porphobilinogen deaminase signature 71 90 1.3E-19 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amir_6729 01f6bde1d0cdc06b375d4b16a6756bbc 313 PRINTS PR00151 Porphobilinogen deaminase signature 119 136 1.3E-19 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amir_6729 01f6bde1d0cdc06b375d4b16a6756bbc 313 PRINTS PR00151 Porphobilinogen deaminase signature 138 155 1.3E-19 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amir_6729 01f6bde1d0cdc06b375d4b16a6756bbc 313 PRINTS PR00151 Porphobilinogen deaminase signature 226 243 1.3E-19 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amir_6729 01f6bde1d0cdc06b375d4b16a6756bbc 313 SUPERFAMILY SSF54782 216 303 3.4E-15 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amir_6729 01f6bde1d0cdc06b375d4b16a6756bbc 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 5 299 2.4E-87 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amir_6729 01f6bde1d0cdc06b375d4b16a6756bbc 313 SUPERFAMILY SSF53850 3 211 7.87E-65 T 14-10-2018 Amir_6729 01f6bde1d0cdc06b375d4b16a6756bbc 313 Gene3D G3DSA:3.30.160.40 217 307 1.0E-17 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amir_6729 01f6bde1d0cdc06b375d4b16a6756bbc 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 223 299 4.8E-18 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amir_2781 bf0c826dbf6d4930a0a078f8e3446ca6 681 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 178 457 3.3E-52 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 Amir_2781 bf0c826dbf6d4930a0a078f8e3446ca6 681 Gene3D G3DSA:3.20.20.80 151 481 5.2E-94 T 14-10-2018 Amir_2781 bf0c826dbf6d4930a0a078f8e3446ca6 681 SMART SM00637 30 129 3.7E-45 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_2781 bf0c826dbf6d4930a0a078f8e3446ca6 681 SUPERFAMILY SSF81296 486 580 1.96E-12 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_2781 bf0c826dbf6d4930a0a078f8e3446ca6 681 Gene3D G3DSA:2.60.40.10 483 580 2.4E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2781 bf0c826dbf6d4930a0a078f8e3446ca6 681 Pfam PF00553 Cellulose binding domain 30 129 2.0E-31 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_2781 bf0c826dbf6d4930a0a078f8e3446ca6 681 SUPERFAMILY SSF49384 26 131 3.0E-32 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_2781 bf0c826dbf6d4930a0a078f8e3446ca6 681 SUPERFAMILY SSF51445 143 479 2.56E-61 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_2781 bf0c826dbf6d4930a0a078f8e3446ca6 681 Pfam PF03442 Carbohydrate binding domain X2 486 569 2.6E-16 T 14-10-2018 IPR005102 Carbohydrate binding X2 domain Amir_2781 bf0c826dbf6d4930a0a078f8e3446ca6 681 Gene3D G3DSA:2.60.40.290 23 132 4.4E-36 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_5775 2535d055b79e037966f134717874ecee 143 SUPERFAMILY SSF89447 2 135 1.12E-46 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Amir_5775 2535d055b79e037966f134717874ecee 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 135 1.7E-20 T 14-10-2018 IPR020603 MraZ domain Amir_5775 2535d055b79e037966f134717874ecee 143 Pfam PF02381 MraZ protein, putative antitoxin-like 2 70 4.5E-20 T 14-10-2018 IPR020603 MraZ domain Amir_5775 2535d055b79e037966f134717874ecee 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 128 2.0E-47 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Amir_5775 2535d055b79e037966f134717874ecee 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 52.955 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Amir_5775 2535d055b79e037966f134717874ecee 143 Gene3D G3DSA:2.40.330.20 1 139 1.3E-45 T 14-10-2018 IPR038619 MraZ superfamily Amir_5775 2535d055b79e037966f134717874ecee 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 136 2.9E-38 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Amir_5256 4e7a5a4b342d8e3788c67cb96c0c64a1 194 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 145 160 2.9E-6 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Amir_5256 4e7a5a4b342d8e3788c67cb96c0c64a1 194 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 68 85 2.9E-6 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Amir_5256 4e7a5a4b342d8e3788c67cb96c0c64a1 194 Pfam PF01478 Type IV leader peptidase family 60 163 4.6E-15 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Amir_1193 529941bdc52f19f1f69562e4c032b647 691 Pfam PF00271 Helicase conserved C-terminal domain 246 341 1.0E-13 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_1193 529941bdc52f19f1f69562e4c032b647 691 Pfam PF16124 RecQ zinc-binding 439 481 4.8E-6 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Amir_1193 529941bdc52f19f1f69562e4c032b647 691 SMART SM00490 261 342 2.9E-24 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_1193 529941bdc52f19f1f69562e4c032b647 691 Gene3D G3DSA:3.40.50.300 224 400 6.8E-30 T 14-10-2018 Amir_1193 529941bdc52f19f1f69562e4c032b647 691 Pfam PF00270 DEAD/DEAH box helicase 27 195 1.2E-15 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amir_1193 529941bdc52f19f1f69562e4c032b647 691 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 24 355 1.4E-69 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Amir_1193 529941bdc52f19f1f69562e4c032b647 691 SUPERFAMILY SSF52540 68 361 3.5E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1193 529941bdc52f19f1f69562e4c032b647 691 Gene3D G3DSA:1.10.10.10 429 504 2.6E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1193 529941bdc52f19f1f69562e4c032b647 691 SUPERFAMILY SSF53271 568 688 4.83E-10 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Amir_1193 529941bdc52f19f1f69562e4c032b647 691 Gene3D G3DSA:3.40.50.300 5 209 2.8E-54 T 14-10-2018 Amir_1193 529941bdc52f19f1f69562e4c032b647 691 SMART SM00487 20 220 1.4E-24 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_1193 529941bdc52f19f1f69562e4c032b647 691 Gene3D G3DSA:3.40.50.2020 596 690 1.9E-5 T 14-10-2018 Amir_4338 9d9d79d8f3969cd87b49bd70a6bd3654 231 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 58 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_4338 9d9d79d8f3969cd87b49bd70a6bd3654 231 Gene3D G3DSA:1.10.357.10 10 194 2.0E-20 T 14-10-2018 Amir_4338 9d9d79d8f3969cd87b49bd70a6bd3654 231 SUPERFAMILY SSF46689 10 82 2.59E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4338 9d9d79d8f3969cd87b49bd70a6bd3654 231 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 3.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4338 9d9d79d8f3969cd87b49bd70a6bd3654 231 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 3.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4338 9d9d79d8f3969cd87b49bd70a6bd3654 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 1.8E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5081 a18d0e7b90c5ab1c671e6679a67e2ab3 122 Pfam PF02627 Carboxymuconolactone decarboxylase family 34 116 1.1E-24 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Amir_5081 a18d0e7b90c5ab1c671e6679a67e2ab3 122 SUPERFAMILY SSF69118 5 120 6.15E-35 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amir_5081 a18d0e7b90c5ab1c671e6679a67e2ab3 122 Gene3D G3DSA:1.20.1290.10 4 122 4.6E-40 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amir_0539 15497330862a14e8914ac918e7ef8124 334 SUPERFAMILY SSF50129 1 140 4.91E-41 T 14-10-2018 IPR011032 GroES-like superfamily Amir_0539 15497330862a14e8914ac918e7ef8124 334 Pfam PF00107 Zinc-binding dehydrogenase 157 286 3.3E-21 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_0539 15497330862a14e8914ac918e7ef8124 334 SMART SM00829 18 332 6.4E-7 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_0539 15497330862a14e8914ac918e7ef8124 334 Gene3D G3DSA:3.40.50.720 125 302 7.4E-131 T 14-10-2018 Amir_0539 15497330862a14e8914ac918e7ef8124 334 Gene3D G3DSA:3.90.180.10 19 331 7.4E-131 T 14-10-2018 Amir_0539 15497330862a14e8914ac918e7ef8124 334 Pfam PF16884 N-terminal domain of oxidoreductase 6 112 9.6E-39 T 14-10-2018 Amir_0539 15497330862a14e8914ac918e7ef8124 334 SUPERFAMILY SSF51735 122 299 5.75E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4747 67fb96b82c44a136107037ad812487b0 477 SUPERFAMILY SSF52467 302 475 3.07E-71 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amir_4747 67fb96b82c44a136107037ad812487b0 477 Gene3D G3DSA:3.40.50.1220 295 477 3.6E-83 T 14-10-2018 Amir_4747 67fb96b82c44a136107037ad812487b0 477 PIRSF PIRSF000204 1 476 1.4E-181 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 Amir_4747 67fb96b82c44a136107037ad812487b0 477 Pfam PF02233 NAD(P) transhydrogenase beta subunit 8 472 4.0E-172 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Amir_0432 224dc497a5ab116e49258c8809d84346 734 SMART SM01073 3 87 8.9E-16 T 14-10-2018 IPR003338 CDC48, N-terminal subdomain Amir_0432 224dc497a5ab116e49258c8809d84346 734 SUPERFAMILY SSF50692 14 85 7.21E-10 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Amir_0432 224dc497a5ab116e49258c8809d84346 734 ProSitePatterns PS00674 AAA-protein family signature. 610 628 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Amir_0432 224dc497a5ab116e49258c8809d84346 734 SUPERFAMILY SSF52540 217 444 4.3E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0432 224dc497a5ab116e49258c8809d84346 734 Gene3D G3DSA:1.10.8.60 380 464 2.7E-16 T 14-10-2018 Amir_0432 224dc497a5ab116e49258c8809d84346 734 Gene3D G3DSA:2.40.40.20 3 87 2.3E-6 T 14-10-2018 Amir_0432 224dc497a5ab116e49258c8809d84346 734 SMART SM00382 505 642 1.4E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0432 224dc497a5ab116e49258c8809d84346 734 SMART SM00382 250 380 5.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0432 224dc497a5ab116e49258c8809d84346 734 Gene3D G3DSA:3.40.50.300 212 379 6.1E-21 T 14-10-2018 Amir_0432 224dc497a5ab116e49258c8809d84346 734 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 255 377 2.7E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amir_0432 224dc497a5ab116e49258c8809d84346 734 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 509 639 4.8E-40 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amir_0432 224dc497a5ab116e49258c8809d84346 734 SUPERFAMILY SSF52540 470 721 5.73E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0432 224dc497a5ab116e49258c8809d84346 734 Gene3D G3DSA:3.40.50.300 470 725 9.8E-86 T 14-10-2018 Amir_0432 224dc497a5ab116e49258c8809d84346 734 Pfam PF02359 Cell division protein 48 (CDC48), N-terminal domain 10 86 3.8E-11 T 14-10-2018 IPR003338 CDC48, N-terminal subdomain Amir_0432 224dc497a5ab116e49258c8809d84346 734 Gene3D G3DSA:1.10.8.60 641 713 9.8E-86 T 14-10-2018 Amir_3236 62c41e72ef69dd55ab3add3e466eb9cb 137 SUPERFAMILY SSF55874 42 132 1.27E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3236 62c41e72ef69dd55ab3add3e466eb9cb 137 Gene3D G3DSA:3.30.565.10 8 134 2.6E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3236 62c41e72ef69dd55ab3add3e466eb9cb 137 Pfam PF13581 Histidine kinase-like ATPase domain 23 128 8.8E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5713 d442233066a4f8bcbe10b97e1ec1f34d 210 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 209 31.376 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Amir_5713 d442233066a4f8bcbe10b97e1ec1f34d 210 PIRSF PIRSF000495 2 210 1.5E-60 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Amir_5713 d442233066a4f8bcbe10b97e1ec1f34d 210 SUPERFAMILY SSF52317 3 208 4.72E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_5713 d442233066a4f8bcbe10b97e1ec1f34d 210 Gene3D G3DSA:3.40.50.880 1 209 9.6E-67 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_5713 d442233066a4f8bcbe10b97e1ec1f34d 210 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 208 8.4E-62 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Amir_5713 d442233066a4f8bcbe10b97e1ec1f34d 210 Pfam PF00117 Glutamine amidotransferase class-I 6 206 6.2E-18 T 14-10-2018 IPR017926 Glutamine amidotransferase Amir_6924 1ec9594bad88c99230ebfa2d12ac21b8 385 Pfam PF01979 Amidohydrolase family 57 374 1.4E-25 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_6924 1ec9594bad88c99230ebfa2d12ac21b8 385 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 11 374 2.2E-81 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 Amir_6924 1ec9594bad88c99230ebfa2d12ac21b8 385 Gene3D G3DSA:3.20.20.140 61 348 1.9E-125 T 14-10-2018 Amir_6924 1ec9594bad88c99230ebfa2d12ac21b8 385 Gene3D G3DSA:2.30.40.10 15 380 1.9E-125 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_6924 1ec9594bad88c99230ebfa2d12ac21b8 385 SUPERFAMILY SSF51556 60 354 1.36E-92 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_6924 1ec9594bad88c99230ebfa2d12ac21b8 385 PIRSF PIRSF038994 9 385 2.7E-114 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 Amir_6924 1ec9594bad88c99230ebfa2d12ac21b8 385 SUPERFAMILY SSF51338 5 372 2.16E-18 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_4882 b139ada1d5b786eba74dde10f365005e 443 PIRSF PIRSF036696 8 249 7.5E-30 T 14-10-2018 Amir_4882 b139ada1d5b786eba74dde10f365005e 443 PIRSF PIRSF036696 287 442 9.3E-8 T 14-10-2018 Amir_4882 b139ada1d5b786eba74dde10f365005e 443 Gene3D G3DSA:3.30.70.360 211 345 2.2E-16 T 14-10-2018 Amir_4882 b139ada1d5b786eba74dde10f365005e 443 Gene3D G3DSA:3.40.630.10 8 210 5.9E-51 T 14-10-2018 Amir_4882 b139ada1d5b786eba74dde10f365005e 443 Pfam PF07687 Peptidase dimerisation domain 204 334 4.2E-14 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Amir_4882 b139ada1d5b786eba74dde10f365005e 443 SUPERFAMILY SSF53187 9 442 3.43E-55 T 14-10-2018 Amir_4882 b139ada1d5b786eba74dde10f365005e 443 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 86 95 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Amir_4882 b139ada1d5b786eba74dde10f365005e 443 SUPERFAMILY SSF55031 207 328 5.47E-11 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amir_4882 b139ada1d5b786eba74dde10f365005e 443 Pfam PF01546 Peptidase family M20/M25/M40 87 442 1.2E-39 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Amir_5034 551b16493d08de2bad78f51a7a8a2eb9 498 SMART SM00388 272 340 2.6E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_5034 551b16493d08de2bad78f51a7a8a2eb9 498 SUPERFAMILY SSF158472 212 260 1.83E-5 T 14-10-2018 Amir_5034 551b16493d08de2bad78f51a7a8a2eb9 498 Gene3D G3DSA:1.20.1440.210 54 173 1.4E-11 T 14-10-2018 Amir_5034 551b16493d08de2bad78f51a7a8a2eb9 498 SMART SM00304 212 264 0.0014 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5034 551b16493d08de2bad78f51a7a8a2eb9 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 470 4.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5034 551b16493d08de2bad78f51a7a8a2eb9 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 4.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5034 551b16493d08de2bad78f51a7a8a2eb9 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 489 4.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5034 551b16493d08de2bad78f51a7a8a2eb9 498 SUPERFAMILY SSF55874 329 490 1.31E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5034 551b16493d08de2bad78f51a7a8a2eb9 498 SUPERFAMILY SSF47384 257 338 2.94E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_5034 551b16493d08de2bad78f51a7a8a2eb9 498 Pfam PF00512 His Kinase A (phospho-acceptor) domain 273 337 8.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_5034 551b16493d08de2bad78f51a7a8a2eb9 498 SMART SM00387 381 492 2.8E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5034 551b16493d08de2bad78f51a7a8a2eb9 498 Pfam PF00672 HAMP domain 212 260 4.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5034 551b16493d08de2bad78f51a7a8a2eb9 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 384 490 8.8E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5034 551b16493d08de2bad78f51a7a8a2eb9 498 Gene3D G3DSA:3.30.565.10 343 496 6.9E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5034 551b16493d08de2bad78f51a7a8a2eb9 498 Gene3D G3DSA:1.10.287.130 210 336 3.6E-17 T 14-10-2018 Amir_5034 551b16493d08de2bad78f51a7a8a2eb9 498 Pfam PF05227 CHASE3 domain 56 179 8.5E-19 T 14-10-2018 IPR007891 CHASE3 Amir_4927 4776fce1fbe17519dfad1f56aacde4c4 495 Gene3D G3DSA:3.40.190.10 38 264 5.1E-52 T 14-10-2018 Amir_4927 4776fce1fbe17519dfad1f56aacde4c4 495 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 414 1.4E-51 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Amir_4927 4776fce1fbe17519dfad1f56aacde4c4 495 PIRSF PIRSF002741 60 479 5.3E-45 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amir_4927 4776fce1fbe17519dfad1f56aacde4c4 495 Gene3D G3DSA:3.10.105.10 265 460 6.7E-27 T 14-10-2018 Amir_4927 4776fce1fbe17519dfad1f56aacde4c4 495 SUPERFAMILY SSF53850 32 479 2.58E-79 T 14-10-2018 Amir_3441 34a6fda7f7128a0ee0beea0e8a171d50 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 331 346 2.0E-13 T 14-10-2018 Amir_3441 34a6fda7f7128a0ee0beea0e8a171d50 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 346 362 2.0E-13 T 14-10-2018 Amir_3441 34a6fda7f7128a0ee0beea0e8a171d50 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 22 44 2.0E-13 T 14-10-2018 Amir_3441 34a6fda7f7128a0ee0beea0e8a171d50 428 Gene3D G3DSA:3.50.50.60 20 403 1.3E-71 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3441 34a6fda7f7128a0ee0beea0e8a171d50 428 Pfam PF01494 FAD binding domain 22 186 5.0E-5 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_3441 34a6fda7f7128a0ee0beea0e8a171d50 428 Pfam PF01494 FAD binding domain 311 366 7.7E-8 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_3441 34a6fda7f7128a0ee0beea0e8a171d50 428 SUPERFAMILY SSF51905 19 411 8.91E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6361 f58d66bce8d4fec87dc572f21e100d4e 491 Pfam PF01580 FtsK/SpoIIIE family 227 412 4.0E-9 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Amir_6361 f58d66bce8d4fec87dc572f21e100d4e 491 SUPERFAMILY SSF52540 202 459 1.48E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6361 f58d66bce8d4fec87dc572f21e100d4e 491 Gene3D G3DSA:3.40.50.300 214 477 1.7E-38 T 14-10-2018 Amir_0833 67dc6f4b2c03cedb9e421ea9b9177a30 390 Gene3D G3DSA:3.40.50.720 13 263 1.5E-87 T 14-10-2018 Amir_0833 67dc6f4b2c03cedb9e421ea9b9177a30 390 Pfam PF00899 ThiF family 21 258 4.0E-64 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Amir_0833 67dc6f4b2c03cedb9e421ea9b9177a30 390 Gene3D G3DSA:3.40.250.10 286 390 4.3E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_0833 67dc6f4b2c03cedb9e421ea9b9177a30 390 SUPERFAMILY SSF69572 7 357 3.14E-99 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Amir_0833 67dc6f4b2c03cedb9e421ea9b9177a30 390 Pfam PF00581 Rhodanese-like domain 289 381 3.1E-14 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_0833 67dc6f4b2c03cedb9e421ea9b9177a30 390 SMART SM00450 287 385 3.6E-29 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_5829 ba70581f79f7c320f5f555a98e80e221 439 Gene3D G3DSA:1.20.1250.20 216 412 1.8E-10 T 14-10-2018 Amir_5829 ba70581f79f7c320f5f555a98e80e221 439 Pfam PF07690 Major Facilitator Superfamily 19 305 6.1E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_5829 ba70581f79f7c320f5f555a98e80e221 439 SUPERFAMILY SSF103473 5 411 1.7E-50 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_5829 ba70581f79f7c320f5f555a98e80e221 439 Gene3D G3DSA:1.20.1250.20 4 198 2.5E-30 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Gene3D G3DSA:3.30.559.10 1529 1888 1.7E-116 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 SUPERFAMILY SSF56801 1944 2485 1.1E-142 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 SMART SM00823 Phosphopantetheine attachment site 2473 2540 6.0E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 SMART SM00823 Phosphopantetheine attachment site 982 1040 0.051 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 SUPERFAMILY SSF52777 1061 1218 6.45E-19 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 SUPERFAMILY SSF52777 2721 2963 1.45E-28 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Gene3D G3DSA:3.30.559.10 1054 1212 5.6E-24 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Gene3D G3DSA:3.30.559.10 2541 2706 2.7E-38 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 SUPERFAMILY SSF52777 1253 1490 2.22E-25 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2496 2511 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Gene3D G3DSA:3.30.559.10 3000 3342 5.7E-86 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Gene3D G3DSA:3.30.559.30 3160 3394 5.7E-86 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 SUPERFAMILY SSF56801 459 995 4.32E-115 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Gene3D G3DSA:3.30.559.30 230 454 1.2E-49 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Gene3D G3DSA:1.10.1200.10 972 1053 3.6E-19 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Gene3D G3DSA:1.10.1200.10 2460 2540 4.9E-15 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Pfam PF00668 Condensation domain 16 359 2.6E-32 T 14-10-2018 IPR001242 Condensation domain Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Pfam PF00668 Condensation domain 2588 2884 7.7E-27 T 14-10-2018 IPR001242 Condensation domain Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Pfam PF00668 Condensation domain 1524 1955 4.2E-67 T 14-10-2018 IPR001242 Condensation domain Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Pfam PF00668 Condensation domain 1103 1389 1.7E-24 T 14-10-2018 IPR001242 Condensation domain Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Pfam PF00668 Condensation domain 2995 3394 3.7E-38 T 14-10-2018 IPR001242 Condensation domain Amir_2719 790bb65987b9f56302529e175cd137f2 3410 SUPERFAMILY SSF52777 18 198 4.6E-25 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Gene3D G3DSA:3.30.559.30 1702 1953 1.7E-116 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Gene3D G3DSA:3.30.559.10 18 221 8.7E-49 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Gene3D G3DSA:3.40.50.12780 475 874 3.0E-103 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Gene3D G3DSA:3.40.50.12780 1965 2365 8.2E-128 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Gene3D G3DSA:3.30.559.30 2707 2963 2.3E-58 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Gene3D G3DSA:3.30.559.30 1214 1490 1.1E-53 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Pfam PF00550 Phosphopantetheine attachment site 987 1047 5.7E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Pfam PF00550 Phosphopantetheine attachment site 2475 2535 2.7E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Gene3D G3DSA:3.30.300.30 2366 2459 3.3E-28 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Gene3D G3DSA:3.30.300.30 875 971 2.9E-29 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 ProSitePatterns PS00455 Putative AMP-binding domain signature. 625 636 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Pfam PF00501 AMP-binding enzyme 487 880 6.6E-74 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Pfam PF00501 AMP-binding enzyme 1978 2371 2.6E-93 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 SUPERFAMILY SSF52777 2547 2734 2.22E-25 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 SUPERFAMILY SSF52777 3162 3395 1.45E-37 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1009 1024 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_2719 790bb65987b9f56302529e175cd137f2 3410 SUPERFAMILY SSF52777 204 446 1.33E-30 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2121 2132 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_2719 790bb65987b9f56302529e175cd137f2 3410 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1362 1514 3.1E-22 T 14-10-2018 IPR010060 Non-ribosomal peptide synthase Amir_2719 790bb65987b9f56302529e175cd137f2 3410 SUPERFAMILY SSF52777 1702 1944 1.89E-47 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 SUPERFAMILY SSF52777 2993 3174 3.67E-31 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 SUPERFAMILY SSF47336 978 1047 6.33E-13 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2719 790bb65987b9f56302529e175cd137f2 3410 SUPERFAMILY SSF52777 1521 1716 3.22E-35 T 14-10-2018 Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Pfam PF13193 AMP-binding enzyme C-terminal domain 888 962 4.3E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_2719 790bb65987b9f56302529e175cd137f2 3410 Pfam PF13193 AMP-binding enzyme C-terminal domain 2379 2449 6.3E-10 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_2719 790bb65987b9f56302529e175cd137f2 3410 SUPERFAMILY SSF47336 2466 2534 1.02E-10 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2719 790bb65987b9f56302529e175cd137f2 3410 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 502 903 1.3E-102 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_2719 790bb65987b9f56302529e175cd137f2 3410 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1997 2395 1.8E-123 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3035 76c702d45e4c3c1740fd606b8199f101 189 Pfam PF12867 DinB superfamily 71 174 2.0E-12 T 14-10-2018 IPR024775 DinB-like domain Amir_3035 76c702d45e4c3c1740fd606b8199f101 189 SUPERFAMILY SSF109854 70 181 4.43E-13 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_5219 120742a46208a2874d09de2ceb0f7154 212 Pfam PF00677 Lumazine binding domain 99 183 1.6E-26 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amir_5219 120742a46208a2874d09de2ceb0f7154 212 Pfam PF00677 Lumazine binding domain 3 86 8.9E-22 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amir_5219 120742a46208a2874d09de2ceb0f7154 212 SUPERFAMILY SSF63380 92 193 2.64E-33 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amir_5219 120742a46208a2874d09de2ceb0f7154 212 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 2 192 4.1E-64 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amir_5219 120742a46208a2874d09de2ceb0f7154 212 SUPERFAMILY SSF63380 2 87 1.62E-23 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amir_5219 120742a46208a2874d09de2ceb0f7154 212 PIRSF PIRSF000498 1 208 4.2E-71 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amir_5219 120742a46208a2874d09de2ceb0f7154 212 Gene3D G3DSA:2.40.30.20 1 87 2.1E-25 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amir_5219 120742a46208a2874d09de2ceb0f7154 212 Gene3D G3DSA:2.40.30.20 101 199 1.8E-36 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amir_3698 40531db570d5d66438c7b862b5902682 476 Gene3D G3DSA:3.40.710.10 28 345 1.2E-73 T 14-10-2018 Amir_3698 40531db570d5d66438c7b862b5902682 476 SUPERFAMILY SSF56601 26 342 2.32E-72 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_3698 40531db570d5d66438c7b862b5902682 476 Pfam PF00144 Beta-lactamase 33 342 7.0E-61 T 14-10-2018 IPR001466 Beta-lactamase-related Amir_2286 be40ef7701a9e802319ad76c499b716a 287 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 192 286 2.3E-28 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Amir_2286 be40ef7701a9e802319ad76c499b716a 287 Gene3D G3DSA:3.40.190.10 4 210 1.3E-56 T 14-10-2018 Amir_2286 be40ef7701a9e802319ad76c499b716a 287 Gene3D G3DSA:3.40.190.10 91 180 1.3E-56 T 14-10-2018 Amir_2286 be40ef7701a9e802319ad76c499b716a 287 SUPERFAMILY SSF54913 215 286 5.0E-19 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Amir_2286 be40ef7701a9e802319ad76c499b716a 287 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 143 164 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 Amir_2286 be40ef7701a9e802319ad76c499b716a 287 Pfam PF01634 ATP phosphoribosyltransferase 51 208 2.1E-41 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Amir_2286 be40ef7701a9e802319ad76c499b716a 287 SUPERFAMILY SSF53850 4 213 8.25E-61 T 14-10-2018 Amir_2286 be40ef7701a9e802319ad76c499b716a 287 Pfam PF08029 HisG, C-terminal domain 212 282 5.5E-23 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Amir_2286 be40ef7701a9e802319ad76c499b716a 287 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 4 185 4.2E-54 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Amir_2286 be40ef7701a9e802319ad76c499b716a 287 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 3 287 32.048 T 14-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Amir_2286 be40ef7701a9e802319ad76c499b716a 287 Gene3D G3DSA:3.30.70.120 215 281 1.8E-23 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Amir_0519 72be17ff50487aac1232b2452f0888bb 589 SMART SM00382 370 564 4.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0519 72be17ff50487aac1232b2452f0888bb 589 Pfam PF00664 ABC transporter transmembrane region 28 297 1.4E-38 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_0519 72be17ff50487aac1232b2452f0888bb 589 SUPERFAMILY SSF52540 335 578 4.92E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0519 72be17ff50487aac1232b2452f0888bb 589 SUPERFAMILY SSF90123 13 330 4.58E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_0519 72be17ff50487aac1232b2452f0888bb 589 Gene3D G3DSA:3.40.50.300 334 581 3.1E-77 T 14-10-2018 Amir_0519 72be17ff50487aac1232b2452f0888bb 589 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0519 72be17ff50487aac1232b2452f0888bb 589 Pfam PF00005 ABC transporter 361 509 8.1E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0519 72be17ff50487aac1232b2452f0888bb 589 Gene3D G3DSA:1.20.1560.10 2 330 9.7E-76 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_4300 4568545dd1fa41cd51cf6f6fe015fe02 242 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 37 133 3.1E-14 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Amir_4300 4568545dd1fa41cd51cf6f6fe015fe02 242 Gene3D G3DSA:3.90.100.10 155 239 2.1E-14 T 14-10-2018 Amir_4300 4568545dd1fa41cd51cf6f6fe015fe02 242 SUPERFAMILY SSF53383 26 137 3.3E-22 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_4300 4568545dd1fa41cd51cf6f6fe015fe02 242 Gene3D G3DSA:3.40.640.10 17 144 2.9E-28 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_4300 4568545dd1fa41cd51cf6f6fe015fe02 242 SUPERFAMILY SSF55904 161 239 2.62E-24 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 Amir_4300 4568545dd1fa41cd51cf6f6fe015fe02 242 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 172 223 1.5E-8 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 Amir_0220 56686b2a13c9742c5384f1b2bc2e67a6 67 Gene3D G3DSA:2.40.50.140 1 66 7.4E-30 T 14-10-2018 Amir_0220 56686b2a13c9742c5384f1b2bc2e67a6 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.1E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_0220 56686b2a13c9742c5384f1b2bc2e67a6 67 PRINTS PR00050 Cold shock protein signature 4 19 3.0E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_0220 56686b2a13c9742c5384f1b2bc2e67a6 67 PRINTS PR00050 Cold shock protein signature 40 58 3.0E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_0220 56686b2a13c9742c5384f1b2bc2e67a6 67 PRINTS PR00050 Cold shock protein signature 25 34 3.0E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_0220 56686b2a13c9742c5384f1b2bc2e67a6 67 SUPERFAMILY SSF50249 2 66 4.93E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_0220 56686b2a13c9742c5384f1b2bc2e67a6 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site Amir_0220 56686b2a13c9742c5384f1b2bc2e67a6 67 SMART SM00357 3 67 6.2E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Amir_0220 56686b2a13c9742c5384f1b2bc2e67a6 67 PIRSF PIRSF002599 1 67 6.7E-26 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 Amir_3553 07ac4f3bda0629982b1d10a61b53e0ef 619 Pfam PF13632 Glycosyl transferase family group 2 172 254 3.7E-7 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_3553 07ac4f3bda0629982b1d10a61b53e0ef 619 SUPERFAMILY SSF53448 10 231 3.28E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_3553 07ac4f3bda0629982b1d10a61b53e0ef 619 SUPERFAMILY SSF51735 374 506 2.76E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3553 07ac4f3bda0629982b1d10a61b53e0ef 619 Gene3D G3DSA:3.40.50.720 375 485 4.7E-11 T 14-10-2018 Amir_3553 07ac4f3bda0629982b1d10a61b53e0ef 619 Pfam PF00535 Glycosyl transferase family 2 11 125 6.5E-18 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_3553 07ac4f3bda0629982b1d10a61b53e0ef 619 Gene3D G3DSA:3.30.360.10 486 516 4.7E-11 T 14-10-2018 Amir_3553 07ac4f3bda0629982b1d10a61b53e0ef 619 Gene3D G3DSA:3.90.550.10 3 234 7.0E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_2737 8ea978883d2fd8c777d48337ef2a50fa 227 SUPERFAMILY SSF46894 152 222 1.05E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_2737 8ea978883d2fd8c777d48337ef2a50fa 227 SMART SM00448 5 121 4.8E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2737 8ea978883d2fd8c777d48337ef2a50fa 227 SUPERFAMILY SSF52172 4 139 1.57E-34 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2737 8ea978883d2fd8c777d48337ef2a50fa 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 162 216 2.1E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2737 8ea978883d2fd8c777d48337ef2a50fa 227 SMART SM00421 159 216 3.6E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2737 8ea978883d2fd8c777d48337ef2a50fa 227 Pfam PF00072 Response regulator receiver domain 7 122 1.7E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2737 8ea978883d2fd8c777d48337ef2a50fa 227 Gene3D G3DSA:3.40.50.12740 5 222 1.2E-72 T 14-10-2018 Amir_2737 8ea978883d2fd8c777d48337ef2a50fa 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 192 7.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2737 8ea978883d2fd8c777d48337ef2a50fa 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 204 7.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2737 8ea978883d2fd8c777d48337ef2a50fa 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 176 7.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2737 8ea978883d2fd8c777d48337ef2a50fa 227 ProSitePatterns PS00622 LuxR-type HTH domain signature. 176 203 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0398 f441293a1add6a0180e0eee039752d0c 366 SUPERFAMILY SSF56601 42 359 3.95E-65 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_0398 f441293a1add6a0180e0eee039752d0c 366 Gene3D G3DSA:3.40.710.10 31 363 3.4E-80 T 14-10-2018 Amir_0398 f441293a1add6a0180e0eee039752d0c 366 Pfam PF00144 Beta-lactamase 37 347 1.3E-54 T 14-10-2018 IPR001466 Beta-lactamase-related Amir_4671 5bdd8f841ad361e707c003581460e67d 287 Pfam PF00296 Luciferase-like monooxygenase 5 250 1.6E-45 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_4671 5bdd8f841ad361e707c003581460e67d 287 SUPERFAMILY SSF51679 5 283 4.58E-60 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_4671 5bdd8f841ad361e707c003581460e67d 287 Gene3D G3DSA:3.20.20.30 3 286 3.6E-62 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_2273 db36ea10e97ef318674d67edea098c93 323 PIRSF PIRSF002849 2 322 1.4E-111 T 14-10-2018 Amir_2273 db36ea10e97ef318674d67edea098c93 323 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 51 180 4.7E-57 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Amir_2273 db36ea10e97ef318674d67edea098c93 323 Gene3D G3DSA:3.40.50.300 13 199 4.7E-44 T 14-10-2018 Amir_2273 db36ea10e97ef318674d67edea098c93 323 SUPERFAMILY SSF52540 28 297 7.16E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2273 db36ea10e97ef318674d67edea098c93 323 Gene3D G3DSA:1.10.8.300 212 319 9.7E-21 T 14-10-2018 Amir_2956 718947b2d0210cea5f274167c08c28e6 1339 Pfam PF03704 Bacterial transcriptional activator domain 108 251 7.7E-43 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_2956 718947b2d0210cea5f274167c08c28e6 1339 Gene3D G3DSA:1.10.10.10 2 103 1.3E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2956 718947b2d0210cea5f274167c08c28e6 1339 SUPERFAMILY SSF46894 8 101 1.13E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_2956 718947b2d0210cea5f274167c08c28e6 1339 Pfam PF13191 AAA ATPase domain 523 676 5.5E-18 T 14-10-2018 Amir_2956 718947b2d0210cea5f274167c08c28e6 1339 SMART SM01043 108 251 5.2E-52 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_2956 718947b2d0210cea5f274167c08c28e6 1339 Pfam PF00486 Transcriptional regulatory protein, C terminal 30 101 9.9E-7 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2956 718947b2d0210cea5f274167c08c28e6 1339 Gene3D G3DSA:1.25.40.10 106 267 1.3E-48 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2956 718947b2d0210cea5f274167c08c28e6 1339 SUPERFAMILY SSF52540 521 768 2.72E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2956 718947b2d0210cea5f274167c08c28e6 1339 SMART SM00862 21 101 3.5E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2956 718947b2d0210cea5f274167c08c28e6 1339 SUPERFAMILY SSF48452 104 262 4.05E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4630 3c13b9c6b9eeaa4b1c3ab13317d18322 109 Gene3D G3DSA:3.30.70.100 1 96 5.0E-21 T 14-10-2018 Amir_4630 3c13b9c6b9eeaa4b1c3ab13317d18322 109 SUPERFAMILY SSF54909 1 95 2.57E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_4630 3c13b9c6b9eeaa4b1c3ab13317d18322 109 Pfam PF07045 Domain of unknown function (DUF1330) 2 95 4.1E-24 T 14-10-2018 IPR010753 Domain of unknown function DUF1330 Amir_3537 bc53de25c987d00876c0adb2d95c040f 358 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 28 210 5.4E-21 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_3537 bc53de25c987d00876c0adb2d95c040f 358 SMART SM00458 230 358 1.7E-12 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3537 bc53de25c987d00876c0adb2d95c040f 358 SUPERFAMILY SSF50370 231 356 9.86E-26 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_3537 bc53de25c987d00876c0adb2d95c040f 358 Gene3D G3DSA:3.40.50.1110 25 226 2.6E-58 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_3537 bc53de25c987d00876c0adb2d95c040f 358 Gene3D G3DSA:2.80.10.50 230 324 4.4E-15 T 14-10-2018 Amir_3537 bc53de25c987d00876c0adb2d95c040f 358 Gene3D G3DSA:2.80.10.50 325 357 5.9E-9 T 14-10-2018 Amir_3537 bc53de25c987d00876c0adb2d95c040f 358 Pfam PF00652 Ricin-type beta-trefoil lectin domain 232 355 9.2E-19 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3537 bc53de25c987d00876c0adb2d95c040f 358 SUPERFAMILY SSF52266 16 218 5.22E-32 T 14-10-2018 Amir_5512 08e18b26b6a426867f582d2771890b21 634 Pfam PF00326 Prolyl oligopeptidase family 426 634 6.8E-47 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Amir_5512 08e18b26b6a426867f582d2771890b21 634 SUPERFAMILY SSF53474 384 634 9.84E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5512 08e18b26b6a426867f582d2771890b21 634 Pfam PF07676 WD40-like Beta Propeller Repeat 183 206 0.004 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_5512 08e18b26b6a426867f582d2771890b21 634 Pfam PF07676 WD40-like Beta Propeller Repeat 96 128 8.1E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_5512 08e18b26b6a426867f582d2771890b21 634 Pfam PF07676 WD40-like Beta Propeller Repeat 58 82 9.7E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_5512 08e18b26b6a426867f582d2771890b21 634 Gene3D G3DSA:2.120.10.30 156 368 3.4E-12 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_5512 08e18b26b6a426867f582d2771890b21 634 SUPERFAMILY SSF82171 15 359 3.73E-24 T 14-10-2018 Amir_5512 08e18b26b6a426867f582d2771890b21 634 Gene3D G3DSA:3.40.50.1820 391 634 6.9E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5512 08e18b26b6a426867f582d2771890b21 634 Gene3D G3DSA:2.120.10.30 15 155 2.6E-21 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_3705 a95df718318ac06999037728e9eac637 527 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 502 2.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_3705 a95df718318ac06999037728e9eac637 527 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 522 2.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_3705 a95df718318ac06999037728e9eac637 527 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 465 2.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_3705 a95df718318ac06999037728e9eac637 527 Gene3D G3DSA:3.30.450.20 202 313 5.2E-18 T 14-10-2018 Amir_3705 a95df718318ac06999037728e9eac637 527 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 321 365 8.8E-12 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain Amir_3705 a95df718318ac06999037728e9eac637 527 Pfam PF17203 Single cache domain 3 39 171 1.1E-33 T 14-10-2018 IPR033463 Single cache domain 3 Amir_3705 a95df718318ac06999037728e9eac637 527 SMART SM00387 415 525 9.6E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_3705 a95df718318ac06999037728e9eac637 527 Gene3D G3DSA:3.30.565.10 384 525 1.1E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3705 a95df718318ac06999037728e9eac637 527 SUPERFAMILY SSF103190 40 167 6.67E-36 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amir_3705 a95df718318ac06999037728e9eac637 527 SUPERFAMILY SSF55890 322 365 1.1E-10 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 Amir_3705 a95df718318ac06999037728e9eac637 527 Gene3D G3DSA:3.30.450.20 35 173 4.8E-44 T 14-10-2018 Amir_3705 a95df718318ac06999037728e9eac637 527 SUPERFAMILY SSF55874 385 522 1.7E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3705 a95df718318ac06999037728e9eac637 527 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 421 523 5.5E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_6767 ade46ea1091ad72a2f4225d927132787 177 Gene3D G3DSA:1.10.357.10 1 177 3.1E-40 T 14-10-2018 Amir_6767 ade46ea1091ad72a2f4225d927132787 177 SUPERFAMILY SSF46689 3 70 2.64E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_6767 ade46ea1091ad72a2f4225d927132787 177 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 57 1.9E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6767 ade46ea1091ad72a2f4225d927132787 177 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 94 176 8.3E-20 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal Amir_6767 ade46ea1091ad72a2f4225d927132787 177 SUPERFAMILY SSF48498 94 176 1.14E-14 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4331 e87054ef40b94e41695dc620075711e9 414 SUPERFAMILY SSF50370 38 161 1.31E-34 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_4331 e87054ef40b94e41695dc620075711e9 414 SUPERFAMILY SSF53955 181 413 2.25E-89 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Amir_4331 e87054ef40b94e41695dc620075711e9 414 Pfam PF00652 Ricin-type beta-trefoil lectin domain 40 159 1.3E-26 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4331 e87054ef40b94e41695dc620075711e9 414 Gene3D G3DSA:2.80.10.50 29 163 7.2E-39 T 14-10-2018 Amir_4331 e87054ef40b94e41695dc620075711e9 414 SMART SM00458 33 162 4.4E-27 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4331 e87054ef40b94e41695dc620075711e9 414 Gene3D G3DSA:1.20.141.10 188 411 6.6E-103 T 14-10-2018 Amir_4331 e87054ef40b94e41695dc620075711e9 414 Pfam PF01374 Glycosyl hydrolase family 46 193 402 8.2E-101 T 14-10-2018 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 Amir_4331 e87054ef40b94e41695dc620075711e9 414 Gene3D G3DSA:3.30.386.10 204 298 6.6E-103 T 14-10-2018 IPR023099 Glycoside hydrolase, family 46, N-terminal GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 Amir_2848 dcb42f182bc8b4b9cc70e5fcf297ca53 306 SUPERFAMILY SSF51679 7 301 2.06E-54 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_2848 dcb42f182bc8b4b9cc70e5fcf297ca53 306 Pfam PF00296 Luciferase-like monooxygenase 8 243 1.1E-43 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_2848 dcb42f182bc8b4b9cc70e5fcf297ca53 306 Gene3D G3DSA:3.20.20.30 2 302 7.7E-55 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_6716 417356918d4165f1dc8150007f541ee4 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 102 4.3E-10 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_6716 417356918d4165f1dc8150007f541ee4 324 Gene3D G3DSA:3.90.180.10 19 320 9.0E-69 T 14-10-2018 Amir_6716 417356918d4165f1dc8150007f541ee4 324 SUPERFAMILY SSF51735 132 255 4.9E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6716 417356918d4165f1dc8150007f541ee4 324 Gene3D G3DSA:3.40.50.720 142 272 9.0E-69 T 14-10-2018 Amir_6716 417356918d4165f1dc8150007f541ee4 324 SMART SM00829 21 321 1.5E-12 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_6716 417356918d4165f1dc8150007f541ee4 324 Pfam PF13602 Zinc-binding dehydrogenase 201 321 1.9E-13 T 14-10-2018 Amir_6716 417356918d4165f1dc8150007f541ee4 324 SUPERFAMILY SSF50129 11 165 1.67E-37 T 14-10-2018 IPR011032 GroES-like superfamily Amir_5456 50f372aa2646e65696cc03d583ef3dbd 340 Gene3D G3DSA:3.40.50.720 5 326 1.4E-116 T 14-10-2018 Amir_5456 50f372aa2646e65696cc03d583ef3dbd 340 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 340 4.1E-115 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amir_5456 50f372aa2646e65696cc03d583ef3dbd 340 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 135 6.1E-24 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Amir_5456 50f372aa2646e65696cc03d583ef3dbd 340 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 155 311 6.9E-25 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amir_5456 50f372aa2646e65696cc03d583ef3dbd 340 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 141 157 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amir_5456 50f372aa2646e65696cc03d583ef3dbd 340 SUPERFAMILY SSF51735 3 169 5.06E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5456 50f372aa2646e65696cc03d583ef3dbd 340 SUPERFAMILY SSF55347 146 308 6.87E-48 T 14-10-2018 Amir_5456 50f372aa2646e65696cc03d583ef3dbd 340 SMART SM00859 4 136 5.4E-42 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Amir_5456 50f372aa2646e65696cc03d583ef3dbd 340 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 3 334 39.141 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amir_5456 50f372aa2646e65696cc03d583ef3dbd 340 Gene3D G3DSA:3.30.360.10 150 313 1.4E-116 T 14-10-2018 Amir_6027 54c1adf2cae104b294111d0922483597 292 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Amir_6027 54c1adf2cae104b294111d0922483597 292 Gene3D G3DSA:3.40.50.720 82 264 4.6E-72 T 14-10-2018 Amir_6027 54c1adf2cae104b294111d0922483597 292 Gene3D G3DSA:3.40.50.720 20 289 4.6E-72 T 14-10-2018 Amir_6027 54c1adf2cae104b294111d0922483597 292 SUPERFAMILY SSF51735 84 258 1.03E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6027 54c1adf2cae104b294111d0922483597 292 SUPERFAMILY SSF52283 26 112 1.67E-7 T 14-10-2018 Amir_6027 54c1adf2cae104b294111d0922483597 292 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 91 257 2.5E-43 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Amir_2455 f9ba850e504b48929a896291bac8960a 362 SUPERFAMILY SSF103481 185 283 5.62E-15 T 14-10-2018 Amir_2455 f9ba850e504b48929a896291bac8960a 362 SUPERFAMILY SSF103481 52 142 1.12E-13 T 14-10-2018 Amir_2455 f9ba850e504b48929a896291bac8960a 362 Pfam PF00892 EamA-like transporter family 13 139 1.6E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amir_2455 f9ba850e504b48929a896291bac8960a 362 Pfam PF00892 EamA-like transporter family 149 283 1.6E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amir_6966 97db56eed03f4d4ca2df31160fa32956 106 Pfam PF00166 Chaperonin 10 Kd subunit 8 93 1.1E-17 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amir_6966 97db56eed03f4d4ca2df31160fa32956 106 Gene3D G3DSA:2.30.33.40 4 95 2.7E-15 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Amir_6966 97db56eed03f4d4ca2df31160fa32956 106 PRINTS PR00297 10kDa chaperonin signature 60 72 4.7E-9 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amir_6966 97db56eed03f4d4ca2df31160fa32956 106 PRINTS PR00297 10kDa chaperonin signature 81 94 4.7E-9 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amir_6966 97db56eed03f4d4ca2df31160fa32956 106 PRINTS PR00297 10kDa chaperonin signature 8 23 4.7E-9 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amir_6966 97db56eed03f4d4ca2df31160fa32956 106 PRINTS PR00297 10kDa chaperonin signature 34 55 4.7E-9 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amir_6966 97db56eed03f4d4ca2df31160fa32956 106 SUPERFAMILY SSF50129 6 94 7.48E-19 T 14-10-2018 IPR011032 GroES-like superfamily Amir_6966 97db56eed03f4d4ca2df31160fa32956 106 SMART SM00883 7 94 3.5E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amir_0773 faed85e9d6543ab536a10b1c23d44968 359 Pfam PF01546 Peptidase family M20/M25/M40 71 356 1.4E-20 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Amir_0773 faed85e9d6543ab536a10b1c23d44968 359 TIGRFAM TIGR01900 dapE-gram_pos: succinyl-diaminopimelate desuccinylase 11 356 9.9E-154 T 14-10-2018 IPR010174 Succinyl-diaminopimelate desuccinylase, DapE GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Amir_0773 faed85e9d6543ab536a10b1c23d44968 359 Gene3D G3DSA:3.40.630.10 21 344 3.1E-97 T 14-10-2018 Amir_0773 faed85e9d6543ab536a10b1c23d44968 359 SUPERFAMILY SSF53187 14 356 1.45E-42 T 14-10-2018 Amir_0773 faed85e9d6543ab536a10b1c23d44968 359 SUPERFAMILY SSF55031 171 272 9.42E-19 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amir_0773 faed85e9d6543ab536a10b1c23d44968 359 Gene3D G3DSA:3.30.70.360 171 279 3.1E-97 T 14-10-2018 Amir_0773 faed85e9d6543ab536a10b1c23d44968 359 Pfam PF07687 Peptidase dimerisation domain 171 268 7.3E-15 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Amir_6316 3537ce917bb1728adb73442e63b6a257 609 Pfam PF00733 Asparagine synthase 195 585 2.6E-31 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Amir_6316 3537ce917bb1728adb73442e63b6a257 609 SUPERFAMILY SSF52402 192 525 7.26E-30 T 14-10-2018 Amir_6316 3537ce917bb1728adb73442e63b6a257 609 SUPERFAMILY SSF56235 74 176 1.39E-9 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_6316 3537ce917bb1728adb73442e63b6a257 609 Gene3D G3DSA:3.60.20.10 73 184 4.9E-7 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_0320 7481b01ba8a4a6f17554079ccc7e62b5 358 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 55 66 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_0320 7481b01ba8a4a6f17554079ccc7e62b5 358 Gene3D G3DSA:1.10.645.20 19 358 5.0E-104 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_0320 7481b01ba8a4a6f17554079ccc7e62b5 358 SUPERFAMILY SSF56762 27 358 2.35E-84 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_0320 7481b01ba8a4a6f17554079ccc7e62b5 358 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 132 281 3.7E-27 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_0320 7481b01ba8a4a6f17554079ccc7e62b5 358 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 283 358 6.3E-19 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_5871 6e56a2ba1c2d8d6d52d0d0bd169762e8 309 Gene3D G3DSA:3.40.50.1820 15 308 1.5E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5871 6e56a2ba1c2d8d6d52d0d0bd169762e8 309 SUPERFAMILY SSF53474 25 305 1.66E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5871 6e56a2ba1c2d8d6d52d0d0bd169762e8 309 Pfam PF12146 Serine aminopeptidase, S33 30 285 5.6E-26 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Amir_3984 899458f70fa6f1545e31f8883750105b 605 Gene3D G3DSA:1.25.10.10 10 208 1.4E-9 T 14-10-2018 IPR011989 Armadillo-like helical Amir_3984 899458f70fa6f1545e31f8883750105b 605 Pfam PF13646 HEAT repeats 61 157 1.6E-9 T 14-10-2018 Amir_3984 899458f70fa6f1545e31f8883750105b 605 Gene3D G3DSA:1.25.10.10 237 363 1.7E-8 T 14-10-2018 IPR011989 Armadillo-like helical Amir_3984 899458f70fa6f1545e31f8883750105b 605 SMART SM00567 E-Z type HEAT repeats 71 112 110.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Amir_3984 899458f70fa6f1545e31f8883750105b 605 SMART SM00567 E-Z type HEAT repeats 289 320 200.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Amir_3984 899458f70fa6f1545e31f8883750105b 605 SMART SM00567 E-Z type HEAT repeats 114 143 29.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Amir_3984 899458f70fa6f1545e31f8883750105b 605 SMART SM00567 E-Z type HEAT repeats 510 541 580.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Amir_3984 899458f70fa6f1545e31f8883750105b 605 SMART SM00567 E-Z type HEAT repeats 335 359 22.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Amir_3984 899458f70fa6f1545e31f8883750105b 605 SUPERFAMILY SSF48371 260 565 2.3E-7 T 14-10-2018 IPR016024 Armadillo-type fold Amir_3984 899458f70fa6f1545e31f8883750105b 605 SUPERFAMILY SSF48371 19 359 2.27E-17 T 14-10-2018 IPR016024 Armadillo-type fold Amir_1912 1fb7f244163743b0fbbd092f1931a410 155 Gene3D G3DSA:3.40.50.620 1 134 3.7E-39 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_1912 1fb7f244163743b0fbbd092f1931a410 155 PRINTS PR01438 Universal stress protein signature 113 135 1.9E-17 T 14-10-2018 IPR006015 Universal stress protein A Amir_1912 1fb7f244163743b0fbbd092f1931a410 155 PRINTS PR01438 Universal stress protein signature 3 21 1.9E-17 T 14-10-2018 IPR006015 Universal stress protein A Amir_1912 1fb7f244163743b0fbbd092f1931a410 155 PRINTS PR01438 Universal stress protein signature 95 107 1.9E-17 T 14-10-2018 IPR006015 Universal stress protein A Amir_1912 1fb7f244163743b0fbbd092f1931a410 155 Pfam PF00582 Universal stress protein family 5 135 4.8E-28 T 14-10-2018 IPR006016 UspA Amir_1912 1fb7f244163743b0fbbd092f1931a410 155 SUPERFAMILY SSF52402 5 137 9.21E-32 T 14-10-2018 Amir_6821 276f93a63c4cff4fbca006bfbdaec58e 373 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 56 372 3.1E-90 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Amir_6821 276f93a63c4cff4fbca006bfbdaec58e 373 Pfam PF12849 PBP superfamily domain 50 342 8.6E-61 T 14-10-2018 IPR024370 PBP domain Amir_6821 276f93a63c4cff4fbca006bfbdaec58e 373 Gene3D G3DSA:3.40.190.10 137 314 7.4E-111 T 14-10-2018 Amir_6821 276f93a63c4cff4fbca006bfbdaec58e 373 PIRSF PIRSF002756 7 373 1.1E-117 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Amir_6821 276f93a63c4cff4fbca006bfbdaec58e 373 SUPERFAMILY SSF53850 55 372 3.44E-84 T 14-10-2018 Amir_6821 276f93a63c4cff4fbca006bfbdaec58e 373 Gene3D G3DSA:3.40.190.10 59 359 7.4E-111 T 14-10-2018 Amir_4031 770bd167e156fb720c0753c34ad5ec57 531 Pfam PF16483 Beta-1,3-glucanase 37 392 3.2E-104 T 14-10-2018 IPR032477 Beta-1,3-glucanase, N-terminal KEGG: 00500+3.2.1.39 Amir_4031 770bd167e156fb720c0753c34ad5ec57 531 Gene3D G3DSA:2.80.10.50 401 530 6.8E-33 T 14-10-2018 Amir_4031 770bd167e156fb720c0753c34ad5ec57 531 Gene3D G3DSA:2.60.110.10 42 375 1.0E-117 T 14-10-2018 IPR037176 Osmotin/thaumatin-like superfamily Amir_4031 770bd167e156fb720c0753c34ad5ec57 531 SMART SM00458 404 531 8.8E-29 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4031 770bd167e156fb720c0753c34ad5ec57 531 Pfam PF00652 Ricin-type beta-trefoil lectin domain 407 528 4.7E-24 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4031 770bd167e156fb720c0753c34ad5ec57 531 SUPERFAMILY SSF50370 405 529 5.57E-31 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_4031 770bd167e156fb720c0753c34ad5ec57 531 Gene3D G3DSA:3.30.920.50 236 350 1.0E-117 T 14-10-2018 Amir_2540 41584152ba12da01a26ae641b612662e 1318 Gene3D G3DSA:1.10.3380.30 918 1052 1.4E-6 T 14-10-2018 Amir_2540 41584152ba12da01a26ae641b612662e 1318 Gene3D G3DSA:3.40.50.300 543 729 2.4E-49 T 14-10-2018 Amir_2540 41584152ba12da01a26ae641b612662e 1318 Pfam PF00270 DEAD/DEAH box helicase 550 710 7.7E-21 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amir_2540 41584152ba12da01a26ae641b612662e 1318 Pfam PF00271 Helicase conserved C-terminal domain 763 883 1.6E-7 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_2540 41584152ba12da01a26ae641b612662e 1318 Gene3D G3DSA:3.40.50.300 742 906 7.8E-28 T 14-10-2018 Amir_2540 41584152ba12da01a26ae641b612662e 1318 SMART SM00487 544 735 3.1E-22 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_2540 41584152ba12da01a26ae641b612662e 1318 SUPERFAMILY SSF46785 913 992 3.26E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2540 41584152ba12da01a26ae641b612662e 1318 SUPERFAMILY SSF52540 557 898 4.67E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2540 41584152ba12da01a26ae641b612662e 1318 SMART SM00490 802 883 2.9E-11 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_0774 9d107c86090944337e4fbe23c02e8357 255 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 72 245 6.1E-43 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG Amir_0774 9d107c86090944337e4fbe23c02e8357 255 SUPERFAMILY SSF102405 42 244 1.53E-61 T 14-10-2018 Amir_0774 9d107c86090944337e4fbe23c02e8357 255 Pfam PF03641 Possible lysine decarboxylase 114 242 1.1E-31 T 14-10-2018 IPR031100 LOG family Amir_0774 9d107c86090944337e4fbe23c02e8357 255 Gene3D G3DSA:3.40.50.450 43 254 4.6E-66 T 14-10-2018 Amir_1504 c4bfbda441c82feb4b60fd70e64f1f26 257 Pfam PF00005 ABC transporter 21 172 3.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1504 c4bfbda441c82feb4b60fd70e64f1f26 257 Gene3D G3DSA:3.40.50.300 3 245 4.3E-61 T 14-10-2018 Amir_1504 c4bfbda441c82feb4b60fd70e64f1f26 257 SUPERFAMILY SSF52540 3 232 2.02E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1504 c4bfbda441c82feb4b60fd70e64f1f26 257 SMART SM00382 30 220 6.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2232 75c1e8ce020b488c4ace7bf8f7c6c5ec 302 SUPERFAMILY SSF52172 71 202 9.11E-31 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2232 75c1e8ce020b488c4ace7bf8f7c6c5ec 302 SMART SM00448 71 184 2.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2232 75c1e8ce020b488c4ace7bf8f7c6c5ec 302 SMART SM00421 218 275 2.4E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2232 75c1e8ce020b488c4ace7bf8f7c6c5ec 302 ProSitePatterns PS00622 LuxR-type HTH domain signature. 235 262 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2232 75c1e8ce020b488c4ace7bf8f7c6c5ec 302 Pfam PF00196 Bacterial regulatory proteins, luxR family 222 274 1.3E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2232 75c1e8ce020b488c4ace7bf8f7c6c5ec 302 SUPERFAMILY SSF46894 209 281 4.76E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_2232 75c1e8ce020b488c4ace7bf8f7c6c5ec 302 Pfam PF00072 Response regulator receiver domain 73 185 6.0E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2232 75c1e8ce020b488c4ace7bf8f7c6c5ec 302 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 221 235 2.0E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2232 75c1e8ce020b488c4ace7bf8f7c6c5ec 302 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 235 251 2.0E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2232 75c1e8ce020b488c4ace7bf8f7c6c5ec 302 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 251 263 2.0E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2232 75c1e8ce020b488c4ace7bf8f7c6c5ec 302 Gene3D G3DSA:3.40.50.12740 71 281 6.5E-66 T 14-10-2018 Amir_3718 0a92043d3756459e8a854db2403da081 330 SUPERFAMILY SSF143865 9 263 4.58E-56 T 14-10-2018 Amir_3718 0a92043d3756459e8a854db2403da081 330 Gene3D G3DSA:3.30.460.20 6 131 6.6E-17 T 14-10-2018 Amir_3718 0a92043d3756459e8a854db2403da081 330 Gene3D G3DSA:1.20.58.340 136 272 4.4E-36 T 14-10-2018 Amir_3718 0a92043d3756459e8a854db2403da081 330 SUPERFAMILY SSF144083 266 326 1.31E-12 T 14-10-2018 Amir_3718 0a92043d3756459e8a854db2403da081 330 Pfam PF01544 CorA-like Mg2+ transporter protein 31 326 7.4E-58 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Amir_3718 0a92043d3756459e8a854db2403da081 330 Gene3D G3DSA:1.20.58.340 274 330 8.0E-10 T 14-10-2018 Amir_5784 fd7f669bcd1016300e3c371d89b7cd0c 430 Gene3D G3DSA:2.30.40.20 38 97 1.8E-25 T 14-10-2018 Amir_5784 fd7f669bcd1016300e3c371d89b7cd0c 430 Pfam PF11798 IMS family HHH motif 193 223 8.8E-8 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Amir_5784 fd7f669bcd1016300e3c371d89b7cd0c 430 Pfam PF11799 impB/mucB/samB family C-terminal domain 262 373 4.4E-21 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Amir_5784 fd7f669bcd1016300e3c371d89b7cd0c 430 Gene3D G3DSA:3.30.70.270 141 198 4.5E-17 T 14-10-2018 Amir_5784 fd7f669bcd1016300e3c371d89b7cd0c 430 Gene3D G3DSA:3.30.1490.100 267 371 4.3E-27 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Amir_5784 fd7f669bcd1016300e3c371d89b7cd0c 430 Gene3D G3DSA:1.10.150.20 199 262 7.9E-20 T 14-10-2018 Amir_5784 fd7f669bcd1016300e3c371d89b7cd0c 430 Hamap MF_01113 DNA polymerase IV [dinB]. 27 377 36.39 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Amir_5784 fd7f669bcd1016300e3c371d89b7cd0c 430 Gene3D G3DSA:3.30.70.270 98 140 1.6E-9 T 14-10-2018 Amir_5784 fd7f669bcd1016300e3c371d89b7cd0c 430 Pfam PF00817 impB/mucB/samB family 33 179 6.6E-47 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Amir_5784 fd7f669bcd1016300e3c371d89b7cd0c 430 SUPERFAMILY SSF100879 267 363 3.92E-27 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Amir_5784 fd7f669bcd1016300e3c371d89b7cd0c 430 SUPERFAMILY SSF56672 26 261 1.96E-83 T 14-10-2018 Amir_5692 867c6811071fb440fbeba3f5e2ce6eef 500 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 154 469 3.5E-27 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_5692 867c6811071fb440fbeba3f5e2ce6eef 500 Gene3D G3DSA:1.10.1060.10 7 153 1.9E-20 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amir_5692 867c6811071fb440fbeba3f5e2ce6eef 500 PRINTS PR00419 Adrenodoxin reductase family signature 294 308 7.4E-24 T 14-10-2018 Amir_5692 867c6811071fb440fbeba3f5e2ce6eef 500 PRINTS PR00419 Adrenodoxin reductase family signature 155 177 7.4E-24 T 14-10-2018 Amir_5692 867c6811071fb440fbeba3f5e2ce6eef 500 PRINTS PR00419 Adrenodoxin reductase family signature 178 191 7.4E-24 T 14-10-2018 Amir_5692 867c6811071fb440fbeba3f5e2ce6eef 500 PRINTS PR00419 Adrenodoxin reductase family signature 220 230 7.4E-24 T 14-10-2018 Amir_5692 867c6811071fb440fbeba3f5e2ce6eef 500 SUPERFAMILY SSF46548 6 164 4.97E-32 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amir_5692 867c6811071fb440fbeba3f5e2ce6eef 500 SUPERFAMILY SSF51971 153 414 6.67E-68 T 14-10-2018 Amir_5692 867c6811071fb440fbeba3f5e2ce6eef 500 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 37 141 1.4E-20 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Amir_5692 867c6811071fb440fbeba3f5e2ce6eef 500 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 487 4.7E-187 T 14-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 Amir_5692 867c6811071fb440fbeba3f5e2ce6eef 500 Gene3D G3DSA:3.50.50.60 290 481 4.7E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5692 867c6811071fb440fbeba3f5e2ce6eef 500 Gene3D G3DSA:3.50.50.60 154 289 4.6E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2306 c15dfe6327387e12684997dafd6ee584 118 Pfam PF13466 STAS domain 21 103 2.0E-14 T 14-10-2018 IPR002645 STAS domain Amir_2306 c15dfe6327387e12684997dafd6ee584 118 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 8 113 2.0E-19 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Amir_2306 c15dfe6327387e12684997dafd6ee584 118 Gene3D G3DSA:3.30.750.24 3 118 2.7E-26 T 14-10-2018 IPR036513 STAS domain superfamily Amir_2306 c15dfe6327387e12684997dafd6ee584 118 SUPERFAMILY SSF52091 8 117 5.3E-19 T 14-10-2018 IPR036513 STAS domain superfamily Amir_0748 90be076646152aa6513b7b6ff9e87282 333 Gene3D G3DSA:3.40.50.300 1 236 2.3E-73 T 14-10-2018 Amir_0748 90be076646152aa6513b7b6ff9e87282 333 SUPERFAMILY SSF52540 3 235 6.15E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0748 90be076646152aa6513b7b6ff9e87282 333 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0748 90be076646152aa6513b7b6ff9e87282 333 SMART SM00382 27 210 1.5E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0748 90be076646152aa6513b7b6ff9e87282 333 Pfam PF00005 ABC transporter 19 160 1.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1843 48d5e33ecd5a35ed97276c1dad37ea90 730 Pfam PF00544 Pectate lyase 136 330 2.2E-39 T 14-10-2018 IPR002022 Pectate lyase Amir_1843 48d5e33ecd5a35ed97276c1dad37ea90 730 Gene3D G3DSA:2.160.20.10 33 418 2.1E-129 T 14-10-2018 IPR012334 Pectin lyase fold Amir_1843 48d5e33ecd5a35ed97276c1dad37ea90 730 SUPERFAMILY SSF51126 419 729 7.16E-58 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_1843 48d5e33ecd5a35ed97276c1dad37ea90 730 Pfam PF01095 Pectinesterase 423 724 1.7E-40 T 14-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 Amir_1843 48d5e33ecd5a35ed97276c1dad37ea90 730 SMART SM00656 100 348 5.4E-27 T 14-10-2018 IPR002022 Pectate lyase Amir_1843 48d5e33ecd5a35ed97276c1dad37ea90 730 SUPERFAMILY SSF51126 37 408 1.85E-65 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_1843 48d5e33ecd5a35ed97276c1dad37ea90 730 Gene3D G3DSA:2.160.20.10 419 730 4.0E-88 T 14-10-2018 IPR012334 Pectin lyase fold Amir_3340 f23b7c79ecf2c0434056a097cfa47856 125 Gene3D G3DSA:1.10.10.10 9 124 6.1E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3340 f23b7c79ecf2c0434056a097cfa47856 125 Pfam PF01638 HxlR-like helix-turn-helix 32 118 1.1E-19 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type Amir_3340 f23b7c79ecf2c0434056a097cfa47856 125 SUPERFAMILY SSF46785 15 119 9.47E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1319 54b64dba46d65f8f49f5afa71c25c0bd 564 Gene3D G3DSA:1.20.1560.10 1 308 3.6E-14 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_1319 54b64dba46d65f8f49f5afa71c25c0bd 564 Gene3D G3DSA:3.40.50.300 317 559 2.1E-57 T 14-10-2018 Amir_1319 54b64dba46d65f8f49f5afa71c25c0bd 564 SUPERFAMILY SSF52540 318 554 7.52E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1319 54b64dba46d65f8f49f5afa71c25c0bd 564 SMART SM00382 349 533 9.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1319 54b64dba46d65f8f49f5afa71c25c0bd 564 Pfam PF00005 ABC transporter 341 489 5.7E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1319 54b64dba46d65f8f49f5afa71c25c0bd 564 SUPERFAMILY SSF90123 5 303 1.83E-23 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_5999 c4c987ff50831f2b1b183bc8d62ad0e3 233 SUPERFAMILY SSF69593 33 222 5.36E-43 T 14-10-2018 Amir_5999 c4c987ff50831f2b1b183bc8d62ad0e3 233 SMART SM00563 40 158 1.6E-37 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_5999 c4c987ff50831f2b1b183bc8d62ad0e3 233 Pfam PF01553 Acyltransferase 34 154 3.8E-25 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_3142 a599e4568122a1412e906f31860e0b64 346 SMART SM00829 10 342 3.5E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_3142 a599e4568122a1412e906f31860e0b64 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amir_3142 a599e4568122a1412e906f31860e0b64 346 Pfam PF00107 Zinc-binding dehydrogenase 182 283 1.5E-22 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_3142 a599e4568122a1412e906f31860e0b64 346 SUPERFAMILY SSF50129 1 187 1.25E-41 T 14-10-2018 IPR011032 GroES-like superfamily Amir_3142 a599e4568122a1412e906f31860e0b64 346 Gene3D G3DSA:3.40.50.720 158 293 4.1E-112 T 14-10-2018 Amir_3142 a599e4568122a1412e906f31860e0b64 346 Gene3D G3DSA:3.90.180.10 17 334 4.1E-112 T 14-10-2018 Amir_3142 a599e4568122a1412e906f31860e0b64 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 139 3.4E-29 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_3142 a599e4568122a1412e906f31860e0b64 346 SUPERFAMILY SSF51735 142 312 1.92E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5548 78f0880a6982903c081f95a3a69063a5 276 Pfam PF00805 Pentapeptide repeats (8 copies) 207 242 1.7E-12 T 14-10-2018 IPR001646 Pentapeptide repeat Amir_5548 78f0880a6982903c081f95a3a69063a5 276 Gene3D G3DSA:2.160.20.100 172 270 1.0E-21 T 14-10-2018 Amir_5548 78f0880a6982903c081f95a3a69063a5 276 SUPERFAMILY SSF141571 56 263 9.29E-23 T 14-10-2018 Amir_6667 46c595762f9aa365c41dc66881249d89 313 SUPERFAMILY SSF103481 55 156 2.88E-11 T 14-10-2018 Amir_6667 46c595762f9aa365c41dc66881249d89 313 TIGRFAM TIGR00688 rarD: protein RarD 21 269 7.2E-58 T 14-10-2018 IPR004626 RarD protein GO:0005887 Amir_6667 46c595762f9aa365c41dc66881249d89 313 SUPERFAMILY SSF103481 203 293 8.89E-8 T 14-10-2018 Amir_6667 46c595762f9aa365c41dc66881249d89 313 Pfam PF00892 EamA-like transporter family 21 155 1.7E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amir_6178 589248a6e0abc40de5ef17a909fe4a2e 326 SUPERFAMILY SSF51430 15 324 1.96E-88 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_6178 589248a6e0abc40de5ef17a909fe4a2e 326 Pfam PF00248 Aldo/keto reductase family 28 325 2.3E-65 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_6178 589248a6e0abc40de5ef17a909fe4a2e 326 Gene3D G3DSA:3.20.20.100 15 326 9.3E-115 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_5668 ba668d8f715d110a454359233e079bb8 400 Pfam PF00108 Thiolase, N-terminal domain 6 227 1.8E-44 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Amir_5668 ba668d8f715d110a454359233e079bb8 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 4.6E-130 T 14-10-2018 IPR002155 Thiolase GO:0016747 Amir_5668 ba668d8f715d110a454359233e079bb8 400 Gene3D G3DSA:3.40.47.10 6 297 2.5E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_5668 ba668d8f715d110a454359233e079bb8 400 PIRSF PIRSF000429 1 400 1.1E-114 T 14-10-2018 IPR002155 Thiolase GO:0016747 Amir_5668 ba668d8f715d110a454359233e079bb8 400 SUPERFAMILY SSF53901 3 277 7.63E-65 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_5668 ba668d8f715d110a454359233e079bb8 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Amir_5668 ba668d8f715d110a454359233e079bb8 400 Pfam PF02803 Thiolase, C-terminal domain 278 399 3.5E-46 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Amir_5668 ba668d8f715d110a454359233e079bb8 400 Gene3D G3DSA:3.40.47.10 124 395 2.5E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_5668 ba668d8f715d110a454359233e079bb8 400 SUPERFAMILY SSF53901 278 399 1.08E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_5668 ba668d8f715d110a454359233e079bb8 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 Amir_5668 ba668d8f715d110a454359233e079bb8 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Amir_4839 f5d777f3840b266d296508dc553f6798 236 Pfam PF11139 Sap, sulfolipid-1-addressing protein 10 211 3.8E-18 T 14-10-2018 IPR021315 Glycolipid exporter Gap/Sap Amir_5010 169b85d1f8e256ec3a9581a11a67dd2d 626 SUPERFAMILY SSF56112 376 593 8.31E-22 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_5010 169b85d1f8e256ec3a9581a11a67dd2d 626 SUPERFAMILY SSF46689 23 138 1.48E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5010 169b85d1f8e256ec3a9581a11a67dd2d 626 SUPERFAMILY SSF53098 205 340 4.05E-6 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_5010 169b85d1f8e256ec3a9581a11a67dd2d 626 Pfam PF13565 Homeodomain-like domain 64 134 6.2E-12 T 14-10-2018 Amir_5010 169b85d1f8e256ec3a9581a11a67dd2d 626 Pfam PF13358 DDE superfamily endonuclease 175 320 7.3E-21 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain Amir_5010 169b85d1f8e256ec3a9581a11a67dd2d 626 Gene3D G3DSA:3.90.1200.10 515 623 6.9E-14 T 14-10-2018 Amir_5010 169b85d1f8e256ec3a9581a11a67dd2d 626 Pfam PF01636 Phosphotransferase enzyme family 388 578 6.1E-17 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_2008 9b565d12c54742169c932d1098da4138 403 SUPERFAMILY SSF48264 60 361 5.13E-21 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2008 9b565d12c54742169c932d1098da4138 403 Gene3D G3DSA:1.10.630.10 259 382 7.0E-13 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2008 9b565d12c54742169c932d1098da4138 403 Gene3D G3DSA:1.10.630.10 33 244 1.9E-5 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_6930 941ac0e7a9bede5aed88cb87cccbba42 313 PRINTS PR00990 Ribokinase signature 6 27 4.0E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_6930 941ac0e7a9bede5aed88cb87cccbba42 313 PRINTS PR00990 Ribokinase signature 33 52 4.0E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_6930 941ac0e7a9bede5aed88cb87cccbba42 313 SUPERFAMILY SSF53613 4 298 2.03E-44 T 14-10-2018 IPR029056 Ribokinase-like Amir_6930 941ac0e7a9bede5aed88cb87cccbba42 313 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Amir_6930 941ac0e7a9bede5aed88cb87cccbba42 313 Pfam PF00294 pfkB family carbohydrate kinase 235 297 9.8E-10 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Amir_6930 941ac0e7a9bede5aed88cb87cccbba42 313 Pfam PF00294 pfkB family carbohydrate kinase 4 182 1.4E-15 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Amir_0377 78a7f1697667b4e701ad39467ede4d7a 550 SMART SM00327 50 254 1.7E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_0377 78a7f1697667b4e701ad39467ede4d7a 550 Pfam PF00092 von Willebrand factor type A domain 52 208 3.2E-9 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_0377 78a7f1697667b4e701ad39467ede4d7a 550 Gene3D G3DSA:3.40.50.410 47 258 8.6E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_0377 78a7f1697667b4e701ad39467ede4d7a 550 SUPERFAMILY SSF53300 50 244 1.46E-17 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_3890 9f50b9a344b51452eef06a7525cd729b 164 Gene3D G3DSA:1.10.101.10 75 151 6.2E-15 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Amir_3890 9f50b9a344b51452eef06a7525cd729b 164 Pfam PF01471 Putative peptidoglycan binding domain 92 144 1.1E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like Amir_3890 9f50b9a344b51452eef06a7525cd729b 164 SUPERFAMILY SSF47090 84 147 1.78E-12 T 14-10-2018 IPR036365 PGBD-like superfamily Amir_1832 59f01b792f0c830df13cfc138f34227e 133 Gene3D G3DSA:3.30.70.1060 1 127 3.2E-26 T 14-10-2018 Amir_1832 59f01b792f0c830df13cfc138f34227e 133 Pfam PF03795 YCII-related domain 28 102 5.3E-11 T 14-10-2018 IPR005545 YCII-related Amir_1832 59f01b792f0c830df13cfc138f34227e 133 SUPERFAMILY SSF54909 17 125 1.34E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_3331 418aa3ce65a2308570ac676109311921 348 Pfam PF12833 Helix-turn-helix domain 229 308 1.9E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_3331 418aa3ce65a2308570ac676109311921 348 SUPERFAMILY SSF46689 260 311 3.94E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3331 418aa3ce65a2308570ac676109311921 348 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 260 302 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amir_3331 418aa3ce65a2308570ac676109311921 348 SUPERFAMILY SSF46689 210 256 3.29E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3331 418aa3ce65a2308570ac676109311921 348 Pfam PF01965 DJ-1/PfpI family 62 168 7.7E-12 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Amir_3331 418aa3ce65a2308570ac676109311921 348 Gene3D G3DSA:3.40.50.880 1 197 5.0E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_3331 418aa3ce65a2308570ac676109311921 348 SMART SM00342 223 306 7.9E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_3331 418aa3ce65a2308570ac676109311921 348 SUPERFAMILY SSF52317 1 189 2.54E-40 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_3331 418aa3ce65a2308570ac676109311921 348 Gene3D G3DSA:1.10.10.60 208 313 5.1E-24 T 14-10-2018 Amir_5408 14705b96067ad0c943f02a3210c14036 622 Pfam PF00069 Protein kinase domain 9 261 1.2E-42 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_5408 14705b96067ad0c943f02a3210c14036 622 SMART SM00220 9 267 3.5E-52 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_5408 14705b96067ad0c943f02a3210c14036 622 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 15 38 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_5408 14705b96067ad0c943f02a3210c14036 622 Gene3D G3DSA:3.30.200.20 1 87 2.2E-27 T 14-10-2018 Amir_5408 14705b96067ad0c943f02a3210c14036 622 Gene3D G3DSA:1.10.510.10 90 275 8.9E-47 T 14-10-2018 Amir_5408 14705b96067ad0c943f02a3210c14036 622 SUPERFAMILY SSF56112 6 341 3.24E-68 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_5408 14705b96067ad0c943f02a3210c14036 622 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 127 139 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_0472 92ac44b14dabd691240a3cf05e2d5a61 153 SMART SM00347 31 132 7.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0472 92ac44b14dabd691240a3cf05e2d5a61 153 Pfam PF01047 MarR family 56 97 4.3E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0472 92ac44b14dabd691240a3cf05e2d5a61 153 Gene3D G3DSA:1.10.10.10 8 147 1.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0472 92ac44b14dabd691240a3cf05e2d5a61 153 SUPERFAMILY SSF46785 28 144 3.05E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3479 0ecd5189cec62d0e2e7a32144ec4df41 466 SUPERFAMILY SSF140453 70 151 4.19E-5 T 14-10-2018 IPR036689 ESAT-6-like superfamily Amir_7011 aa9a8a374a54ef5fc1902fe2bf505580 190 Gene3D G3DSA:1.10.357.10 1 188 1.6E-47 T 14-10-2018 Amir_7011 aa9a8a374a54ef5fc1902fe2bf505580 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 4.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_7011 aa9a8a374a54ef5fc1902fe2bf505580 190 SUPERFAMILY SSF48498 77 189 3.32E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_7011 aa9a8a374a54ef5fc1902fe2bf505580 190 SUPERFAMILY SSF46689 3 79 2.14E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_7011 aa9a8a374a54ef5fc1902fe2bf505580 190 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 78 187 2.0E-8 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal Amir_0764 96e5ef3243e4203e61aa4cf34b11740a 392 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 250 335 3.6E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_0764 96e5ef3243e4203e61aa4cf34b11740a 392 Gene3D G3DSA:3.40.50.300 20 347 9.8E-96 T 14-10-2018 Amir_0764 96e5ef3243e4203e61aa4cf34b11740a 392 SUPERFAMILY SSF52540 22 269 9.1E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0764 96e5ef3243e4203e61aa4cf34b11740a 392 Pfam PF00005 ABC transporter 43 199 2.2E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0764 96e5ef3243e4203e61aa4cf34b11740a 392 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0764 96e5ef3243e4203e61aa4cf34b11740a 392 SMART SM00382 51 249 1.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0764 96e5ef3243e4203e61aa4cf34b11740a 392 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 251 315 5.7E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_5847 ea7dcd847e7fbf8c7f0986a1dbfc5b7d 581 Pfam PF03129 Anticodon binding domain 488 575 4.6E-17 T 14-10-2018 IPR004154 Anticodon-binding Amir_5847 ea7dcd847e7fbf8c7f0986a1dbfc5b7d 581 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 4 574 1.0E-169 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Amir_5847 ea7dcd847e7fbf8c7f0986a1dbfc5b7d 581 Pfam PF04073 Aminoacyl-tRNA editing domain 259 384 2.2E-22 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Amir_5847 ea7dcd847e7fbf8c7f0986a1dbfc5b7d 581 SUPERFAMILY SSF55826 221 399 4.32E-11 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Amir_5847 ea7dcd847e7fbf8c7f0986a1dbfc5b7d 581 PRINTS PR01046 Prolyl-tRNA synthetase signature 146 157 1.5E-14 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Amir_5847 ea7dcd847e7fbf8c7f0986a1dbfc5b7d 581 PRINTS PR01046 Prolyl-tRNA synthetase signature 136 144 1.5E-14 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Amir_5847 ea7dcd847e7fbf8c7f0986a1dbfc5b7d 581 PRINTS PR01046 Prolyl-tRNA synthetase signature 70 88 1.5E-14 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Amir_5847 ea7dcd847e7fbf8c7f0986a1dbfc5b7d 581 PRINTS PR01046 Prolyl-tRNA synthetase signature 106 117 1.5E-14 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Amir_5847 ea7dcd847e7fbf8c7f0986a1dbfc5b7d 581 Gene3D G3DSA:3.90.960.10 242 401 5.0E-211 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Amir_5847 ea7dcd847e7fbf8c7f0986a1dbfc5b7d 581 SUPERFAMILY SSF55681 12 490 3.45E-89 T 14-10-2018 Amir_5847 ea7dcd847e7fbf8c7f0986a1dbfc5b7d 581 Gene3D G3DSA:3.30.930.10 13 477 5.0E-211 T 14-10-2018 Amir_5847 ea7dcd847e7fbf8c7f0986a1dbfc5b7d 581 Hamap MF_01569 Proline--tRNA ligase [proS]. 3 580 36.544 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Amir_5847 ea7dcd847e7fbf8c7f0986a1dbfc5b7d 581 SUPERFAMILY SSF52954 476 578 4.74E-27 T 14-10-2018 Amir_5847 ea7dcd847e7fbf8c7f0986a1dbfc5b7d 581 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 96 470 9.5E-37 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_5847 ea7dcd847e7fbf8c7f0986a1dbfc5b7d 581 Gene3D G3DSA:3.40.50.800 5 564 5.0E-211 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Amir_0064 9832fe2cc0abedd7a0c3f21ff8fab397 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 302 401 9.6E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0064 9832fe2cc0abedd7a0c3f21ff8fab397 428 Pfam PF06580 Histidine kinase 204 282 1.9E-23 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Amir_0064 9832fe2cc0abedd7a0c3f21ff8fab397 428 Gene3D G3DSA:3.30.565.10 258 402 3.8E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0064 9832fe2cc0abedd7a0c3f21ff8fab397 428 SMART SM00387 293 403 1.1E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0064 9832fe2cc0abedd7a0c3f21ff8fab397 428 SUPERFAMILY SSF55874 259 400 1.96E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0212 b1b58caa4df83ed5aecf1836f178155b 191 Pfam PF09335 SNARE associated Golgi protein 17 141 2.8E-10 T 14-10-2018 IPR032816 SNARE associated Golgi protein Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Gene3D G3DSA:3.40.50.12780 1149 1546 1.9E-118 T 14-10-2018 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Gene3D G3DSA:3.40.50.12780 2189 2584 8.6E-92 T 14-10-2018 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Gene3D G3DSA:3.30.559.10 691 1059 9.7E-116 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Gene3D G3DSA:3.30.559.30 868 1126 9.7E-116 T 14-10-2018 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 SUPERFAMILY SSF52777 1933 2171 1.11E-34 T 14-10-2018 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Gene3D G3DSA:3.30.559.30 1937 2177 9.1E-38 T 14-10-2018 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 SUPERFAMILY SSF56801 1154 1669 9.16E-131 T 14-10-2018 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 SUPERFAMILY SSF56801 2185 2679 4.84E-109 T 14-10-2018 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 SUPERFAMILY SSF52777 1749 1945 6.34E-29 T 14-10-2018 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Gene3D G3DSA:3.30.300.30 2585 2683 4.9E-24 T 14-10-2018 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Gene3D G3DSA:3.30.300.30 1547 1642 1.9E-22 T 14-10-2018 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Gene3D G3DSA:1.10.1200.10 583 671 5.9E-11 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Pfam PF00668 Condensation domain 690 1131 4.9E-78 T 14-10-2018 IPR001242 Condensation domain Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Pfam PF00668 Condensation domain 1752 2172 1.9E-41 T 14-10-2018 IPR001242 Condensation domain Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 SUPERFAMILY SSF52777 871 1129 8.78E-55 T 14-10-2018 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1296 1307 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Pfam PF13193 AMP-binding enzyme C-terminal domain 2598 2669 5.3E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Pfam PF13193 AMP-binding enzyme C-terminal domain 1560 1628 1.3E-5 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Pfam PF00550 Phosphopantetheine attachment site 616 666 3.3E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Pfam PF00550 Phosphopantetheine attachment site 1659 1721 3.5E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 SUPERFAMILY SSF47336 591 702 1.31E-12 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 ProSitePatterns PS00012 Phosphopantetheine attachment site. 625 640 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 SMART SM00823 Phosphopantetheine attachment site 1657 1725 3.4E-6 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 SMART SM00823 Phosphopantetheine attachment site 598 670 4.6E-7 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Gene3D G3DSA:3.30.559.10 1746 1936 1.6E-34 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1181 1575 2.8E-111 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 SUPERFAMILY SSF56801 11 562 9.81E-103 T 14-10-2018 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2342 2353 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Pfam PF00501 AMP-binding enzyme 2203 2590 6.4E-61 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Pfam PF00501 AMP-binding enzyme 1160 1551 1.7E-82 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Pfam PF00501 AMP-binding enzyme 22 459 3.8E-77 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 SUPERFAMILY SSF52777 692 860 5.86E-38 T 14-10-2018 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1681 1696 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Gene3D G3DSA:3.40.50.12780 16 451 1.5E-140 T 14-10-2018 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Gene3D G3DSA:1.10.1200.10 1645 1728 8.6E-22 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 Gene3D G3DSA:3.30.300.30 453 577 5.6E-37 T 14-10-2018 Amir_3680 d3bb48a0de715a6a5ede9b94cf2d26eb 2721 SUPERFAMILY SSF47336 1652 1722 1.44E-16 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4682 8111388a48eda0869ffc499e9cc223de 593 SMART SM00637 499 590 4.3E-27 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_4682 8111388a48eda0869ffc499e9cc223de 593 Gene3D G3DSA:2.60.40.290 494 592 1.8E-25 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_4682 8111388a48eda0869ffc499e9cc223de 593 Gene3D G3DSA:2.160.20.10 36 368 2.6E-61 T 14-10-2018 IPR012334 Pectin lyase fold Amir_4682 8111388a48eda0869ffc499e9cc223de 593 SUPERFAMILY SSF51126 34 367 2.03E-37 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_4682 8111388a48eda0869ffc499e9cc223de 593 SUPERFAMILY SSF49384 493 590 7.67E-24 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_4682 8111388a48eda0869ffc499e9cc223de 593 Pfam PF00553 Cellulose binding domain 499 588 1.3E-20 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_6241 57c401efd7e63db2f56b7450f9fd147c 332 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 115 6.7E-18 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amir_6241 57c401efd7e63db2f56b7450f9fd147c 332 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 133 238 1.2E-11 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Amir_6241 57c401efd7e63db2f56b7450f9fd147c 332 SUPERFAMILY SSF55347 127 274 1.96E-24 T 14-10-2018 Amir_6241 57c401efd7e63db2f56b7450f9fd147c 332 SUPERFAMILY SSF51735 2 154 1.56E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6241 57c401efd7e63db2f56b7450f9fd147c 332 Gene3D G3DSA:3.40.50.720 2 303 9.6E-106 T 14-10-2018 Amir_6241 57c401efd7e63db2f56b7450f9fd147c 332 Gene3D G3DSA:3.30.360.10 124 325 9.6E-106 T 14-10-2018 Amir_6999 a8d56f039a4e78bde1a52fcefe4a06d8 549 Gene3D G3DSA:1.20.1730.10 35 526 5.1E-28 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1603 1631 3.2E-5 T 14-10-2018 IPR006530 YD repeat Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1308 1340 0.0019 T 14-10-2018 IPR006530 YD repeat Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1284 1324 2.1E-8 T 14-10-2018 IPR006530 YD repeat Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1187 1220 4.1E-6 T 14-10-2018 IPR006530 YD repeat Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1137 1178 1.0E-6 T 14-10-2018 IPR006530 YD repeat Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1224 1261 0.0014 T 14-10-2018 IPR006530 YD repeat Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1095 1134 1.8E-5 T 14-10-2018 IPR006530 YD repeat Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1054 1093 1.2E-4 T 14-10-2018 IPR006530 YD repeat Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 Gene3D G3DSA:1.10.287.1060 74 157 4.8E-5 T 14-10-2018 Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1929 1991 2.8E-20 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 Pfam PF05593 RHS Repeat 1139 1174 2.3E-5 T 14-10-2018 IPR031325 RHS repeat Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 Pfam PF05593 RHS Repeat 1180 1215 2.5E-7 T 14-10-2018 IPR031325 RHS repeat Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 Pfam PF05593 RHS Repeat 1074 1110 1.3E-7 T 14-10-2018 IPR031325 RHS repeat Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 Pfam PF05593 RHS Repeat 1603 1631 1.1E-5 T 14-10-2018 IPR031325 RHS repeat Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 Pfam PF05593 RHS Repeat 1095 1131 1.7E-6 T 14-10-2018 IPR031325 RHS repeat Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 Pfam PF05593 RHS Repeat 1284 1318 1.3E-4 T 14-10-2018 IPR031325 RHS repeat Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 Gene3D G3DSA:3.90.930.1 1119 1224 9.9E-15 T 14-10-2018 Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 Gene3D G3DSA:3.90.930.1 978 1118 1.6E-7 T 14-10-2018 Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 Gene3D G3DSA:3.90.930.1 1225 1347 1.1E-7 T 14-10-2018 Amir_2870 6369f15cc9f31f2b214f06a76460ecda 2144 Gene3D G3DSA:2.180.10.10 1919 1991 6.1E-19 T 14-10-2018 Amir_1548 052d00e92aab50557b5cc2efd408dc32 414 SMART SM00341 233 313 3.5E-13 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Amir_1548 052d00e92aab50557b5cc2efd408dc32 414 Gene3D G3DSA:1.10.150.80 322 413 5.0E-27 T 14-10-2018 Amir_1548 052d00e92aab50557b5cc2efd408dc32 414 SUPERFAMILY SSF53098 15 231 9.11E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_1548 052d00e92aab50557b5cc2efd408dc32 414 Pfam PF01612 3'-5' exonuclease 30 193 1.8E-33 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Amir_1548 052d00e92aab50557b5cc2efd408dc32 414 SMART SM00474 27 194 7.7E-39 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Amir_1548 052d00e92aab50557b5cc2efd408dc32 414 Pfam PF00570 HRDC domain 236 302 3.1E-13 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Amir_1548 052d00e92aab50557b5cc2efd408dc32 414 Gene3D G3DSA:1.10.150.80 218 315 1.5E-25 T 14-10-2018 Amir_1548 052d00e92aab50557b5cc2efd408dc32 414 Gene3D G3DSA:3.30.420.10 12 216 1.2E-70 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amir_1548 052d00e92aab50557b5cc2efd408dc32 414 SUPERFAMILY SSF47819 215 324 4.8E-25 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Amir_6567 a37edc183fb73cac862ad925589dbd7b 105 SUPERFAMILY SSF140453 5 95 1.83E-19 T 14-10-2018 IPR036689 ESAT-6-like superfamily Amir_6567 a37edc183fb73cac862ad925589dbd7b 105 Pfam PF06013 Proteins of 100 residues with WXG 8 88 6.2E-17 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like Amir_6567 a37edc183fb73cac862ad925589dbd7b 105 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 6 92 3.3E-19 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like Amir_6567 a37edc183fb73cac862ad925589dbd7b 105 Gene3D G3DSA:1.10.287.1060 5 103 6.0E-28 T 14-10-2018 Amir_3172 0e3bd2992f434df5dfab5cbb390f9ce2 198 SUPERFAMILY SSF46689 5 78 3.04E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3172 0e3bd2992f434df5dfab5cbb390f9ce2 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 64 8.8E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3172 0e3bd2992f434df5dfab5cbb390f9ce2 198 Gene3D G3DSA:1.10.357.10 5 196 3.9E-35 T 14-10-2018 Amir_3172 0e3bd2992f434df5dfab5cbb390f9ce2 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 2.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3172 0e3bd2992f434df5dfab5cbb390f9ce2 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 2.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2061 bcb093eaa3407ed545392904c1df7e0e 158 SUPERFAMILY SSF53927 8 136 4.68E-40 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Amir_2061 bcb093eaa3407ed545392904c1df7e0e 158 Gene3D G3DSA:3.40.140.10 5 158 2.4E-50 T 14-10-2018 Amir_2061 bcb093eaa3407ed545392904c1df7e0e 158 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 10 103 1.7E-19 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Amir_3382 7ecb1e821d68a1c990005e8ac1c3ca4f 333 Gene3D G3DSA:3.40.50.2300 91 308 2.8E-28 T 14-10-2018 Amir_3382 7ecb1e821d68a1c990005e8ac1c3ca4f 333 Gene3D G3DSA:3.40.50.2300 170 284 2.8E-28 T 14-10-2018 Amir_3382 7ecb1e821d68a1c990005e8ac1c3ca4f 333 Gene3D G3DSA:1.10.260.40 2 64 2.5E-19 T 14-10-2018 Amir_3382 7ecb1e821d68a1c990005e8ac1c3ca4f 333 Pfam PF13377 Periplasmic binding protein-like domain 178 327 1.8E-15 T 14-10-2018 Amir_3382 7ecb1e821d68a1c990005e8ac1c3ca4f 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 6.6E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_3382 7ecb1e821d68a1c990005e8ac1c3ca4f 333 SUPERFAMILY SSF53822 85 308 1.32E-20 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_3382 7ecb1e821d68a1c990005e8ac1c3ca4f 333 SMART SM00354 4 83 2.5E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_3382 7ecb1e821d68a1c990005e8ac1c3ca4f 333 SUPERFAMILY SSF47413 7 62 1.76E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_4201 26123021e1e04dd134a463505a1f095b 266 SUPERFAMILY SSF53790 16 265 2.49E-36 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amir_4201 26123021e1e04dd134a463505a1f095b 266 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 19 239 2.4E-30 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Amir_4201 26123021e1e04dd134a463505a1f095b 266 PIRSF PIRSF036525 14 266 3.2E-99 T 14-10-2018 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376 Amir_4201 26123021e1e04dd134a463505a1f095b 266 TIGRFAM TIGR02434 CobF: precorrin-6A synthase (deacetylating) 16 264 8.2E-98 T 14-10-2018 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376 Amir_4201 26123021e1e04dd134a463505a1f095b 266 Gene3D G3DSA:3.40.1010.10 14 156 1.5E-40 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amir_4201 26123021e1e04dd134a463505a1f095b 266 Gene3D G3DSA:3.30.950.10 157 266 1.1E-42 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Amir_5801 c900df29e1c956abb22bd107f473b3b1 166 Pfam PF00583 Acetyltransferase (GNAT) family 43 110 7.5E-11 T 14-10-2018 IPR000182 GNAT domain Amir_5801 c900df29e1c956abb22bd107f473b3b1 166 SUPERFAMILY SSF55729 5 125 9.26E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_5801 c900df29e1c956abb22bd107f473b3b1 166 Gene3D G3DSA:3.40.630.30 5 144 4.3E-28 T 14-10-2018 Amir_0016 621c361925ddb669a64dc1fe70c8a3f6 88 Pfam PF06781 Cell division protein CrgA 1 88 5.4E-38 T 14-10-2018 IPR009619 Cell division protein CrgA Amir_0016 621c361925ddb669a64dc1fe70c8a3f6 88 Hamap MF_00631 Cell division protein CrgA [crgA]. 1 88 23.144 T 14-10-2018 IPR009619 Cell division protein CrgA Amir_4174 c3a026e815030d15fad31623075dffd7 493 Pfam PF00553 Cellulose binding domain 397 490 7.3E-24 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_4174 c3a026e815030d15fad31623075dffd7 493 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 41 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_4174 c3a026e815030d15fad31623075dffd7 493 Pfam PF00069 Protein kinase domain 12 262 2.8E-48 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_4174 c3a026e815030d15fad31623075dffd7 493 SUPERFAMILY SSF49384 392 491 5.51E-29 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_4174 c3a026e815030d15fad31623075dffd7 493 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 130 142 - T 14-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 Amir_4174 c3a026e815030d15fad31623075dffd7 493 SMART SM00637 397 490 8.7E-35 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_4174 c3a026e815030d15fad31623075dffd7 493 Gene3D G3DSA:3.30.200.20 2 90 1.5E-24 T 14-10-2018 Amir_4174 c3a026e815030d15fad31623075dffd7 493 SUPERFAMILY SSF56112 5 291 6.2E-69 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_4174 c3a026e815030d15fad31623075dffd7 493 Gene3D G3DSA:1.10.510.10 93 273 1.9E-42 T 14-10-2018 Amir_4174 c3a026e815030d15fad31623075dffd7 493 Gene3D G3DSA:2.60.40.290 391 493 1.3E-29 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_4174 c3a026e815030d15fad31623075dffd7 493 PIRSF PIRSF000654 11 269 4.1E-22 T 14-10-2018 Amir_0753 cc302f77a61fc64551d537ec8597570b 241 Pfam PF00072 Response regulator receiver domain 7 116 4.9E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0753 cc302f77a61fc64551d537ec8597570b 241 SUPERFAMILY SSF52172 5 173 9.53E-39 T 14-10-2018 IPR011006 CheY-like superfamily Amir_0753 cc302f77a61fc64551d537ec8597570b 241 Gene3D G3DSA:3.40.50.2300 2 130 5.8E-35 T 14-10-2018 Amir_0753 cc302f77a61fc64551d537ec8597570b 241 SMART SM00862 150 225 3.7E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_0753 cc302f77a61fc64551d537ec8597570b 241 Gene3D G3DSA:1.10.10.10 131 232 7.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0753 cc302f77a61fc64551d537ec8597570b 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 224 4.4E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_0753 cc302f77a61fc64551d537ec8597570b 241 SMART SM00448 5 116 1.6E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3798 0599a89ba1d2e71a759b1799d6f85c1e 522 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 189 199 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Amir_3798 0599a89ba1d2e71a759b1799d6f85c1e 522 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 154 165 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_3798 0599a89ba1d2e71a759b1799d6f85c1e 522 PRINTS PR00723 Subtilisin serine protease family (S8) signature 341 357 8.7E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_3798 0599a89ba1d2e71a759b1799d6f85c1e 522 PRINTS PR00723 Subtilisin serine protease family (S8) signature 149 168 8.7E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_3798 0599a89ba1d2e71a759b1799d6f85c1e 522 PRINTS PR00723 Subtilisin serine protease family (S8) signature 185 198 8.7E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_3798 0599a89ba1d2e71a759b1799d6f85c1e 522 Gene3D G3DSA:3.30.70.80 39 118 7.5E-14 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Amir_3798 0599a89ba1d2e71a759b1799d6f85c1e 522 SUPERFAMILY SSF54897 43 115 6.23E-9 T 14-10-2018 Amir_3798 0599a89ba1d2e71a759b1799d6f85c1e 522 Gene3D G3DSA:3.40.50.200 121 398 2.0E-84 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_3798 0599a89ba1d2e71a759b1799d6f85c1e 522 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 342 352 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_3798 0599a89ba1d2e71a759b1799d6f85c1e 522 Pfam PF00082 Subtilase family 150 379 1.2E-34 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_3798 0599a89ba1d2e71a759b1799d6f85c1e 522 Pfam PF05922 Peptidase inhibitor I9 46 116 6.4E-5 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Amir_3798 0599a89ba1d2e71a759b1799d6f85c1e 522 SUPERFAMILY SSF52743 126 385 4.58E-71 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_0142 931b72c9816a494f4170a68e6f2f4a89 301 SUPERFAMILY SSF55486 90 261 5.31E-6 T 14-10-2018 Amir_0142 931b72c9816a494f4170a68e6f2f4a89 301 Pfam PF04228 Putative neutral zinc metallopeptidase 11 295 8.3E-70 T 14-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative Amir_5459 faa2c6eb3cd64d811e565369b3982760 365 Pfam PF13586 Transposase DDE domain 74 168 5.9E-15 T 14-10-2018 IPR025668 Transposase DDE domain Amir_6962 005c1882f0f9a1e18d66e879fa7c988b 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 182 1.0E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6962 005c1882f0f9a1e18d66e879fa7c988b 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 198 210 1.0E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6962 005c1882f0f9a1e18d66e879fa7c988b 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 198 1.0E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6962 005c1882f0f9a1e18d66e879fa7c988b 234 Pfam PF00072 Response regulator receiver domain 24 135 1.3E-4 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6962 005c1882f0f9a1e18d66e879fa7c988b 234 SUPERFAMILY SSF52172 22 143 7.9E-9 T 14-10-2018 IPR011006 CheY-like superfamily Amir_6962 005c1882f0f9a1e18d66e879fa7c988b 234 Pfam PF00196 Bacterial regulatory proteins, luxR family 167 222 1.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6962 005c1882f0f9a1e18d66e879fa7c988b 234 SUPERFAMILY SSF46894 165 228 3.2E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_6962 005c1882f0f9a1e18d66e879fa7c988b 234 ProSitePatterns PS00622 LuxR-type HTH domain signature. 182 209 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6962 005c1882f0f9a1e18d66e879fa7c988b 234 SMART SM00421 165 222 1.6E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6962 005c1882f0f9a1e18d66e879fa7c988b 234 Gene3D G3DSA:3.40.50.12740 23 228 2.6E-37 T 14-10-2018 Amir_5659 54c5d35b3ff536771d53c733bd36a038 421 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 223 239 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Amir_5659 54c5d35b3ff536771d53c733bd36a038 421 Gene3D G3DSA:3.40.640.10 38 289 4.3E-174 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_5659 54c5d35b3ff536771d53c733bd36a038 421 Pfam PF00464 Serine hydroxymethyltransferase 9 391 1.1E-162 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Amir_5659 54c5d35b3ff536771d53c733bd36a038 421 SUPERFAMILY SSF53383 3 419 5.78E-172 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_5659 54c5d35b3ff536771d53c733bd36a038 421 PIRSF PIRSF000412 1 417 1.2E-158 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Amir_5659 54c5d35b3ff536771d53c733bd36a038 421 Gene3D G3DSA:3.90.1150.10 11 396 4.3E-174 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_5659 54c5d35b3ff536771d53c733bd36a038 421 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 8 419 50.307 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Amir_4804 2f9f695a966c9ee1fd3974607bc1f1e8 201 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_4804 2f9f695a966c9ee1fd3974607bc1f1e8 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 7.9E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4804 2f9f695a966c9ee1fd3974607bc1f1e8 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 7.9E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4804 2f9f695a966c9ee1fd3974607bc1f1e8 201 Gene3D G3DSA:1.10.357.10 1 192 1.7E-38 T 14-10-2018 Amir_4804 2f9f695a966c9ee1fd3974607bc1f1e8 201 SUPERFAMILY SSF48498 81 180 4.45E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4804 2f9f695a966c9ee1fd3974607bc1f1e8 201 SUPERFAMILY SSF46689 5 86 3.75E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4804 2f9f695a966c9ee1fd3974607bc1f1e8 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 1.8E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3679 efb134173a56c270363e4923bdabfba8 602 Pfam PF00668 Condensation domain 125 555 1.3E-71 T 14-10-2018 IPR001242 Condensation domain Amir_3679 efb134173a56c270363e4923bdabfba8 602 Gene3D G3DSA:3.30.559.30 305 555 2.9E-119 T 14-10-2018 Amir_3679 efb134173a56c270363e4923bdabfba8 602 Pfam PF00550 Phosphopantetheine attachment site 41 100 7.0E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3679 efb134173a56c270363e4923bdabfba8 602 Gene3D G3DSA:3.30.559.10 128 495 2.9E-119 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3679 efb134173a56c270363e4923bdabfba8 602 SUPERFAMILY SSF47336 32 100 2.75E-14 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3679 efb134173a56c270363e4923bdabfba8 602 SUPERFAMILY SSF52777 304 553 2.78E-51 T 14-10-2018 Amir_3679 efb134173a56c270363e4923bdabfba8 602 Gene3D G3DSA:1.10.1200.10 24 110 7.5E-20 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3679 efb134173a56c270363e4923bdabfba8 602 SUPERFAMILY SSF52777 128 303 2.08E-45 T 14-10-2018 Amir_3303 50bd12a2e06ca8eb4532ce260741d6a4 436 SMART SM00637 334 433 5.9E-39 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_3303 50bd12a2e06ca8eb4532ce260741d6a4 436 SUPERFAMILY SSF49384 330 435 3.91E-31 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_3303 50bd12a2e06ca8eb4532ce260741d6a4 436 Pfam PF00553 Cellulose binding domain 337 433 1.9E-26 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_3303 50bd12a2e06ca8eb4532ce260741d6a4 436 Gene3D G3DSA:2.60.40.290 329 436 1.8E-33 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_3303 50bd12a2e06ca8eb4532ce260741d6a4 436 SUPERFAMILY SSF53474 45 284 1.9E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3303 50bd12a2e06ca8eb4532ce260741d6a4 436 Gene3D G3DSA:3.40.50.1820 52 303 1.3E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4290 6c99cb89c7777e7b41fbd6f401c31668 132 Gene3D G3DSA:1.10.10.10 13 82 3.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4290 6c99cb89c7777e7b41fbd6f401c31668 132 SUPERFAMILY SSF46785 18 129 5.46E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4290 6c99cb89c7777e7b41fbd6f401c31668 132 Pfam PF03965 Penicillinase repressor 19 128 1.4E-19 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 Amir_1774 a8b07ccd896fbf17f06a9182ec87bfdc 283 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 64 172 2.8E-18 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Amir_1774 a8b07ccd896fbf17f06a9182ec87bfdc 283 Gene3D G3DSA:1.10.3720.10 58 280 1.9E-53 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1774 a8b07ccd896fbf17f06a9182ec87bfdc 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 275 2.4E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_1774 a8b07ccd896fbf17f06a9182ec87bfdc 283 SUPERFAMILY SSF161098 64 263 2.09E-43 T 14-10-2018 IPR035906 MetI-like superfamily Amir_5971 a0709eaaa68a4c5e30ed7bf3c39c84e4 147 Pfam PF14430 Immunity protein Imm1 15 136 1.2E-31 T 14-10-2018 IPR025680 Immunity protein Imm1 Amir_2140 714ea1989e0d3c9bb3af6f324980f433 427 SUPERFAMILY SSF54001 289 415 1.13E-30 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amir_2140 714ea1989e0d3c9bb3af6f324980f433 427 Pfam PF00877 NlpC/P60 family 304 422 1.1E-24 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Amir_0155 e5e490e6152fa2668044778a469164ef 502 SUPERFAMILY SSF117074 271 343 4.32E-10 T 14-10-2018 Amir_0155 e5e490e6152fa2668044778a469164ef 502 Gene3D G3DSA:2.60.40.10 268 423 3.9E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_0155 e5e490e6152fa2668044778a469164ef 502 Pfam PF17210 SdrD B-like domain 273 341 7.0E-14 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2526 9abba3652361e2d5dd2d531c6e5258d7 331 Gene3D G3DSA:2.60.130.10 48 250 1.8E-31 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Amir_2526 9abba3652361e2d5dd2d531c6e5258d7 331 Pfam PF00775 Dioxygenase 114 188 3.4E-8 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 Amir_2526 9abba3652361e2d5dd2d531c6e5258d7 331 SUPERFAMILY SSF49482 61 258 3.27E-39 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Amir_1966 781b8bd913ccc5dbb644664a6afaaa14 151 SMART SM00347 35 135 4.4E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_1966 781b8bd913ccc5dbb644664a6afaaa14 151 Pfam PF01047 MarR family 42 99 2.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_1966 781b8bd913ccc5dbb644664a6afaaa14 151 SUPERFAMILY SSF46785 7 148 3.46E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1966 781b8bd913ccc5dbb644664a6afaaa14 151 Gene3D G3DSA:1.10.10.10 15 146 1.6E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1966 781b8bd913ccc5dbb644664a6afaaa14 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 8.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_1966 781b8bd913ccc5dbb644664a6afaaa14 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 8.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_1966 781b8bd913ccc5dbb644664a6afaaa14 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 8.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_1255 301e384979c96b3e9b6d18316191b65b 250 SUPERFAMILY SSF57863 84 233 8.89E-42 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger Amir_1255 301e384979c96b3e9b6d18316191b65b 250 Pfam PF11967 Recombination protein O N terminal 4 80 7.9E-26 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal Amir_1255 301e384979c96b3e9b6d18316191b65b 250 Pfam PF02565 Recombination protein O C terminal 86 239 2.8E-36 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Amir_1255 301e384979c96b3e9b6d18316191b65b 250 Gene3D G3DSA:2.40.50.140 2 83 1.8E-27 T 14-10-2018 Amir_1255 301e384979c96b3e9b6d18316191b65b 250 SUPERFAMILY SSF50249 3 80 2.57E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_1255 301e384979c96b3e9b6d18316191b65b 250 TIGRFAM TIGR00613 reco: DNA repair protein RecO 6 240 5.9E-34 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Amir_1255 301e384979c96b3e9b6d18316191b65b 250 Hamap MF_00201 DNA repair protein RecO [recO]. 3 244 26.894 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Amir_1154 770d814910847ed9dfc948f79fb0050a 426 Gene3D G3DSA:1.10.8.60 316 424 2.2E-39 T 14-10-2018 Amir_1154 770d814910847ed9dfc948f79fb0050a 426 SMART SM00382 113 269 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1154 770d814910847ed9dfc948f79fb0050a 426 Pfam PF06689 ClpX C4-type zinc finger 12 48 1.7E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Amir_1154 770d814910847ed9dfc948f79fb0050a 426 SUPERFAMILY SSF52540 59 405 4.76E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1154 770d814910847ed9dfc948f79fb0050a 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 310 1.6E-50 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amir_1154 770d814910847ed9dfc948f79fb0050a 426 Gene3D G3DSA:3.30.50.30 3 50 5.5E-24 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Amir_1154 770d814910847ed9dfc948f79fb0050a 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 415 52.557 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Amir_1154 770d814910847ed9dfc948f79fb0050a 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 411 1.7E-195 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Amir_1154 770d814910847ed9dfc948f79fb0050a 426 Gene3D G3DSA:3.40.50.300 54 314 9.3E-106 T 14-10-2018 Amir_1154 770d814910847ed9dfc948f79fb0050a 426 SUPERFAMILY SSF57716 11 46 1.37E-11 T 14-10-2018 Amir_1154 770d814910847ed9dfc948f79fb0050a 426 SMART SM01086 317 411 4.4E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Amir_1154 770d814910847ed9dfc948f79fb0050a 426 SMART SM00994 10 49 1.1E-23 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Amir_1154 770d814910847ed9dfc948f79fb0050a 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 8.5E-15 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Amir_5573 111f43db89d1a115efd5098d94f9b64a 161 SUPERFAMILY SSF52540 3 116 6.1E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5573 111f43db89d1a115efd5098d94f9b64a 161 Pfam PF13671 AAA domain 5 139 1.3E-16 T 14-10-2018 Amir_5573 111f43db89d1a115efd5098d94f9b64a 161 Gene3D G3DSA:3.40.50.300 2 161 2.0E-29 T 14-10-2018 Amir_5573 111f43db89d1a115efd5098d94f9b64a 161 PIRSF PIRSF037081 1 159 7.7E-16 T 14-10-2018 IPR017101 P-loop ATP/GTP binding protein, All4644, predicted Amir_2069 7d2315e3b7005b3485d60adc918082c2 197 Pfam PF03029 Conserved hypothetical ATP binding protein 23 191 1.4E-26 T 14-10-2018 IPR004130 GPN-loop GTPase Amir_2069 7d2315e3b7005b3485d60adc918082c2 197 SUPERFAMILY SSF52540 17 191 5.64E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2069 7d2315e3b7005b3485d60adc918082c2 197 Gene3D G3DSA:3.40.50.300 16 196 5.8E-16 T 14-10-2018 Amir_0448 33ca4c9d148c5b01158639508219a6ca 277 SUPERFAMILY SSF161098 2 272 5.14E-64 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0448 33ca4c9d148c5b01158639508219a6ca 277 Gene3D G3DSA:1.10.3720.10 1 265 2.8E-58 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0448 33ca4c9d148c5b01158639508219a6ca 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 263 5.1E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_4631 5d9406805355832ce02a3085924c812c 271 SUPERFAMILY SSF47413 11 72 2.52E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_4631 5d9406805355832ce02a3085924c812c 271 SMART SM00530 20 75 2.7E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_4631 5d9406805355832ce02a3085924c812c 271 Gene3D G3DSA:1.10.260.40 10 78 1.2E-12 T 14-10-2018 Amir_4631 5d9406805355832ce02a3085924c812c 271 Pfam PF13560 Helix-turn-helix domain 18 78 5.8E-15 T 14-10-2018 Amir_6157 81832cffe68fcee596440f34f3029dcf 474 Gene3D G3DSA:3.20.20.10 73 333 6.6E-164 T 14-10-2018 IPR029066 PLP-binding barrel Amir_6157 81832cffe68fcee596440f34f3029dcf 474 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 230 243 2.6E-17 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amir_6157 81832cffe68fcee596440f34f3029dcf 474 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 431 444 2.6E-17 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amir_6157 81832cffe68fcee596440f34f3029dcf 474 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 95 113 2.6E-17 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amir_6157 81832cffe68fcee596440f34f3029dcf 474 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 115 127 2.6E-17 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amir_6157 81832cffe68fcee596440f34f3029dcf 474 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 323 342 2.6E-17 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amir_6157 81832cffe68fcee596440f34f3029dcf 474 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 95 113 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Amir_6157 81832cffe68fcee596440f34f3029dcf 474 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 269 286 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Amir_6157 81832cffe68fcee596440f34f3029dcf 474 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 54 474 38.792 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_6157 81832cffe68fcee596440f34f3029dcf 474 PRINTS PR01181 Diaminopimelate decarboxylase signature 441 463 7.6E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_6157 81832cffe68fcee596440f34f3029dcf 474 PRINTS PR01181 Diaminopimelate decarboxylase signature 356 374 7.6E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_6157 81832cffe68fcee596440f34f3029dcf 474 PRINTS PR01181 Diaminopimelate decarboxylase signature 202 211 7.6E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_6157 81832cffe68fcee596440f34f3029dcf 474 PRINTS PR01181 Diaminopimelate decarboxylase signature 113 130 7.6E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_6157 81832cffe68fcee596440f34f3029dcf 474 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 339 431 4.5E-14 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Amir_6157 81832cffe68fcee596440f34f3029dcf 474 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 44 474 7.0E-142 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_6157 81832cffe68fcee596440f34f3029dcf 474 SUPERFAMILY SSF50621 308 474 2.72E-46 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Amir_6157 81832cffe68fcee596440f34f3029dcf 474 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 74 333 2.6E-61 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Amir_6157 81832cffe68fcee596440f34f3029dcf 474 Gene3D G3DSA:2.40.37.10 53 470 6.6E-164 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Amir_6157 81832cffe68fcee596440f34f3029dcf 474 SUPERFAMILY SSF51419 65 334 2.33E-73 T 14-10-2018 IPR029066 PLP-binding barrel Amir_5236 e7efb295d4f116e187b114cd9345b3d8 422 SUPERFAMILY SSF52507 11 180 2.22E-54 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Amir_5236 e7efb295d4f116e187b114cd9345b3d8 422 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 13 407 4.5E-113 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Amir_5236 e7efb295d4f116e187b114cd9345b3d8 422 Pfam PF02441 Flavoprotein 13 179 9.2E-39 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Amir_5236 e7efb295d4f116e187b114cd9345b3d8 422 SUPERFAMILY SSF102645 192 409 9.55E-65 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Amir_5236 e7efb295d4f116e187b114cd9345b3d8 422 Gene3D G3DSA:3.40.50.1950 10 188 1.5E-51 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Amir_5236 e7efb295d4f116e187b114cd9345b3d8 422 Gene3D G3DSA:3.40.50.10300 189 414 5.1E-81 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Amir_5236 e7efb295d4f116e187b114cd9345b3d8 422 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 194 382 1.3E-63 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Amir_0783 f1b0f0873d60f65dcedce4a8cb70f41e 347 SUPERFAMILY SSF50129 19 147 8.22E-28 T 14-10-2018 IPR011032 GroES-like superfamily Amir_0783 f1b0f0873d60f65dcedce4a8cb70f41e 347 Pfam PF00107 Zinc-binding dehydrogenase 159 251 3.3E-22 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_0783 f1b0f0873d60f65dcedce4a8cb70f41e 347 SMART SM00829 20 343 6.7E-15 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_0783 f1b0f0873d60f65dcedce4a8cb70f41e 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 36 95 3.7E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_0783 f1b0f0873d60f65dcedce4a8cb70f41e 347 Gene3D G3DSA:3.90.180.10 20 339 1.5E-80 T 14-10-2018 Amir_0783 f1b0f0873d60f65dcedce4a8cb70f41e 347 Gene3D G3DSA:3.40.50.720 131 289 1.5E-80 T 14-10-2018 Amir_0783 f1b0f0873d60f65dcedce4a8cb70f41e 347 SUPERFAMILY SSF51735 120 309 2.63E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3637 2fa16ebd0ccc985817af507d8732d8d5 633 Pfam PF01435 Peptidase family M48 116 251 5.6E-6 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Amir_3278 a7136a9085205131f61abdbea13bd1bd 218 Pfam PF01596 O-methyltransferase 21 217 1.9E-63 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 Amir_3278 a7136a9085205131f61abdbea13bd1bd 218 SUPERFAMILY SSF53335 9 218 4.71E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3278 a7136a9085205131f61abdbea13bd1bd 218 Gene3D G3DSA:3.40.50.150 1 218 6.4E-74 T 14-10-2018 Amir_4770 f14467be08c2be9ab4c266e797cc0843 250 SUPERFAMILY SSF52540 4 226 1.48E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4770 f14467be08c2be9ab4c266e797cc0843 250 Pfam PF00005 ABC transporter 21 166 6.4E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4770 f14467be08c2be9ab4c266e797cc0843 250 Gene3D G3DSA:3.40.50.300 2 234 3.0E-62 T 14-10-2018 Amir_4770 f14467be08c2be9ab4c266e797cc0843 250 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_4770 f14467be08c2be9ab4c266e797cc0843 250 TIGRFAM TIGR03771 anch_rpt_ABC: anchored repeat-type ABC transporter, ATP-binding subunit 27 248 7.6E-97 T 14-10-2018 IPR022508 ABC transporter, anchored repeat-type, ATP-binding subunit Amir_4770 f14467be08c2be9ab4c266e797cc0843 250 SMART SM00382 30 214 1.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2915 df614ba68e0dd407a628fd3c2eb8b6b9 146 SUPERFAMILY SSF46785 27 130 3.03E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2915 df614ba68e0dd407a628fd3c2eb8b6b9 146 Gene3D G3DSA:1.10.10.10 17 132 5.0E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2915 df614ba68e0dd407a628fd3c2eb8b6b9 146 Pfam PF01638 HxlR-like helix-turn-helix 38 122 5.0E-25 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type Amir_5787 646a280527b065ae74f4fbfba1ffee92 197 SUPERFAMILY SSF88946 15 122 2.75E-18 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5787 646a280527b065ae74f4fbfba1ffee92 197 Pfam PF04542 Sigma-70 region 2 37 105 2.6E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5787 646a280527b065ae74f4fbfba1ffee92 197 Gene3D G3DSA:1.10.10.10 134 193 6.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5787 646a280527b065ae74f4fbfba1ffee92 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 189 7.5E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_5787 646a280527b065ae74f4fbfba1ffee92 197 Pfam PF08281 Sigma-70, region 4 136 187 1.5E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_5787 646a280527b065ae74f4fbfba1ffee92 197 Gene3D G3DSA:1.10.1740.10 13 103 3.3E-15 T 14-10-2018 Amir_5787 646a280527b065ae74f4fbfba1ffee92 197 SUPERFAMILY SSF88659 120 192 1.87E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_4997 a956f0eea118312f456ae816d09e9d82 310 Gene3D G3DSA:3.40.50.1820 31 305 1.2E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4997 a956f0eea118312f456ae816d09e9d82 310 SUPERFAMILY SSF53474 34 303 1.53E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4997 a956f0eea118312f456ae816d09e9d82 310 Pfam PF12697 Alpha/beta hydrolase family 48 288 1.2E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_3109 8fe495c47b1e5a77c539e9fb806d5245 444 Gene3D G3DSA:3.50.50.60 1 396 1.8E-63 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3109 8fe495c47b1e5a77c539e9fb806d5245 444 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 2.2E-5 T 14-10-2018 Amir_3109 8fe495c47b1e5a77c539e9fb806d5245 444 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 2.2E-5 T 14-10-2018 Amir_3109 8fe495c47b1e5a77c539e9fb806d5245 444 SUPERFAMILY SSF51905 2 352 5.44E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3109 8fe495c47b1e5a77c539e9fb806d5245 444 Pfam PF01494 FAD binding domain 4 346 1.3E-19 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_5232 7f2229060559db3eb4b75102f45fc456 605 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 417 435 6.0E-66 T 14-10-2018 Amir_5232 7f2229060559db3eb4b75102f45fc456 605 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 75 100 6.0E-66 T 14-10-2018 Amir_5232 7f2229060559db3eb4b75102f45fc456 605 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 167 186 6.0E-66 T 14-10-2018 Amir_5232 7f2229060559db3eb4b75102f45fc456 605 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 477 492 6.0E-66 T 14-10-2018 Amir_5232 7f2229060559db3eb4b75102f45fc456 605 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 276 292 6.0E-66 T 14-10-2018 Amir_5232 7f2229060559db3eb4b75102f45fc456 605 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 501 518 6.0E-66 T 14-10-2018 Amir_5232 7f2229060559db3eb4b75102f45fc456 605 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 306 325 6.0E-66 T 14-10-2018 Amir_5232 7f2229060559db3eb4b75102f45fc456 605 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 441 459 6.0E-66 T 14-10-2018 Amir_5232 7f2229060559db3eb4b75102f45fc456 605 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 149 167 6.0E-66 T 14-10-2018 Amir_5232 7f2229060559db3eb4b75102f45fc456 605 Gene3D G3DSA:3.60.20.40 417 600 5.4E-52 T 14-10-2018 Amir_5232 7f2229060559db3eb4b75102f45fc456 605 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 55 590 8.9E-120 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 Amir_5232 7f2229060559db3eb4b75102f45fc456 605 Gene3D G3DSA:1.10.246.130 293 407 1.8E-32 T 14-10-2018 Amir_5232 7f2229060559db3eb4b75102f45fc456 605 SUPERFAMILY SSF56235 44 598 1.13E-148 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_5232 7f2229060559db3eb4b75102f45fc456 605 Pfam PF01019 Gamma-glutamyltranspeptidase 68 594 3.6E-145 T 14-10-2018 Amir_3554 5c2fe40abd6ce1c4f8ac09638b8be00f 503 Pfam PF00501 AMP-binding enzyme 31 397 1.5E-66 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3554 5c2fe40abd6ce1c4f8ac09638b8be00f 503 Gene3D G3DSA:3.40.50.12780 21 393 1.2E-83 T 14-10-2018 Amir_3554 5c2fe40abd6ce1c4f8ac09638b8be00f 503 Pfam PF13193 AMP-binding enzyme C-terminal domain 410 491 7.0E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3554 5c2fe40abd6ce1c4f8ac09638b8be00f 503 Gene3D G3DSA:3.30.300.30 395 502 6.6E-21 T 14-10-2018 Amir_3554 5c2fe40abd6ce1c4f8ac09638b8be00f 503 SUPERFAMILY SSF56801 18 501 2.49E-112 T 14-10-2018 Amir_2255 f665526819c966a6d9588d32bbc6395e 228 Pfam PF14230 Domain of unknown function (DUF4333) 144 219 2.7E-20 T 14-10-2018 IPR025637 Domain of unknown function DUF4333 Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 Gene3D G3DSA:1.10.601.10 64 159 1.3E-45 T 14-10-2018 Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 SUPERFAMILY SSF88946 23 157 2.67E-47 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 SUPERFAMILY SSF88659 217 312 2.47E-22 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 Pfam PF04542 Sigma-70 region 2 87 156 9.5E-19 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 Pfam PF00140 Sigma-70 factor, region 1.2 23 56 3.3E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 Gene3D G3DSA:1.10.10.10 160 235 3.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 111 124 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 Gene3D G3DSA:1.20.120.1810 19 63 4.1E-5 T 14-10-2018 Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 PRINTS PR00046 Major sigma-70 factor signature 259 271 1.3E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 PRINTS PR00046 Major sigma-70 factor signature 280 295 1.3E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 PRINTS PR00046 Major sigma-70 factor signature 295 306 1.3E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 PRINTS PR00046 Major sigma-70 factor signature 111 124 1.3E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 PRINTS PR00046 Major sigma-70 factor signature 135 143 1.3E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 280 306 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 Gene3D G3DSA:1.10.10.10 238 316 1.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 SUPERFAMILY SSF88659 160 233 3.79E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 83 308 5.7E-34 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 Pfam PF04545 Sigma-70, region 4 257 307 4.1E-13 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amir_1899 a6ca9318f642c5c3c4cb5ecf5ea9e9c6 320 Pfam PF04539 Sigma-70 region 3 166 241 4.0E-19 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Amir_2925 de8e41bb5440f05ac2aededd7576ab2e 668 Pfam PF03704 Bacterial transcriptional activator domain 104 247 7.1E-41 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_2925 de8e41bb5440f05ac2aededd7576ab2e 668 SUPERFAMILY SSF52540 327 544 2.2E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2925 de8e41bb5440f05ac2aededd7576ab2e 668 SUPERFAMILY SSF48452 99 260 8.43E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2925 de8e41bb5440f05ac2aededd7576ab2e 668 Pfam PF00486 Transcriptional regulatory protein, C terminal 32 85 7.3E-7 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2925 de8e41bb5440f05ac2aededd7576ab2e 668 Pfam PF13191 AAA ATPase domain 335 382 1.5E-8 T 14-10-2018 Amir_2925 de8e41bb5440f05ac2aededd7576ab2e 668 SUPERFAMILY SSF46894 7 85 1.79E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_2925 de8e41bb5440f05ac2aededd7576ab2e 668 Gene3D G3DSA:1.25.40.10 101 271 1.5E-44 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2925 de8e41bb5440f05ac2aededd7576ab2e 668 Gene3D G3DSA:1.10.10.10 2 100 1.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2925 de8e41bb5440f05ac2aededd7576ab2e 668 SMART SM00862 23 106 1.4E-6 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2925 de8e41bb5440f05ac2aededd7576ab2e 668 SMART SM01043 104 247 1.6E-47 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_4834 5c236fb98a850b6d1b6c6f36c9f5ec4f 444 PRINTS PR00385 P450 superfamily signature 257 274 3.3E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4834 5c236fb98a850b6d1b6c6f36c9f5ec4f 444 PRINTS PR00385 P450 superfamily signature 309 320 3.3E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4834 5c236fb98a850b6d1b6c6f36c9f5ec4f 444 PRINTS PR00385 P450 superfamily signature 393 404 3.3E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4834 5c236fb98a850b6d1b6c6f36c9f5ec4f 444 PRINTS PR00385 P450 superfamily signature 384 393 3.3E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4834 5c236fb98a850b6d1b6c6f36c9f5ec4f 444 PRINTS PR00463 E-class P450 group I signature 266 292 1.6E-21 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4834 5c236fb98a850b6d1b6c6f36c9f5ec4f 444 PRINTS PR00463 E-class P450 group I signature 393 416 1.6E-21 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4834 5c236fb98a850b6d1b6c6f36c9f5ec4f 444 PRINTS PR00463 E-class P450 group I signature 348 372 1.6E-21 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4834 5c236fb98a850b6d1b6c6f36c9f5ec4f 444 PRINTS PR00463 E-class P450 group I signature 246 263 1.6E-21 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4834 5c236fb98a850b6d1b6c6f36c9f5ec4f 444 PRINTS PR00463 E-class P450 group I signature 383 393 1.6E-21 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4834 5c236fb98a850b6d1b6c6f36c9f5ec4f 444 PRINTS PR00463 E-class P450 group I signature 35 54 1.6E-21 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4834 5c236fb98a850b6d1b6c6f36c9f5ec4f 444 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 386 395 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_4834 5c236fb98a850b6d1b6c6f36c9f5ec4f 444 Gene3D G3DSA:1.10.630.10 7 444 4.5E-104 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4834 5c236fb98a850b6d1b6c6f36c9f5ec4f 444 SUPERFAMILY SSF48264 8 444 3.27E-88 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4834 5c236fb98a850b6d1b6c6f36c9f5ec4f 444 Pfam PF00067 Cytochrome P450 9 435 3.5E-59 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_0505 bdb216b8955c76fbd187926197684337 220 PIRSF PIRSF009467 1 220 4.6E-36 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 Amir_0505 bdb216b8955c76fbd187926197684337 220 Gene3D G3DSA:1.10.4190.10 1 187 1.4E-25 T 14-10-2018 IPR038277 UreF domain superfamily Amir_0505 bdb216b8955c76fbd187926197684337 220 Pfam PF01730 UreF 33 170 3.7E-18 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 Amir_6221 a5e443d178f801c604e179fce953182a 931 Pfam PF00486 Transcriptional regulatory protein, C terminal 41 106 8.4E-7 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_6221 a5e443d178f801c604e179fce953182a 931 Pfam PF13424 Tetratricopeptide repeat 842 911 1.1E-10 T 14-10-2018 Amir_6221 a5e443d178f801c604e179fce953182a 931 Pfam PF13424 Tetratricopeptide repeat 761 827 6.8E-9 T 14-10-2018 Amir_6221 a5e443d178f801c604e179fce953182a 931 PRINTS PR00364 Disease resistance protein signature 382 396 4.3E-7 T 14-10-2018 Amir_6221 a5e443d178f801c604e179fce953182a 931 PRINTS PR00364 Disease resistance protein signature 304 319 4.3E-7 T 14-10-2018 Amir_6221 a5e443d178f801c604e179fce953182a 931 PRINTS PR00364 Disease resistance protein signature 470 484 4.3E-7 T 14-10-2018 Amir_6221 a5e443d178f801c604e179fce953182a 931 Gene3D G3DSA:1.10.10.10 12 109 8.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6221 a5e443d178f801c604e179fce953182a 931 SMART SM00862 34 107 9.2E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_6221 a5e443d178f801c604e179fce953182a 931 SMART SM01043 114 255 5.0E-46 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_6221 a5e443d178f801c604e179fce953182a 931 SMART SM00028 760 793 2.4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_6221 a5e443d178f801c604e179fce953182a 931 SMART SM00028 840 873 7.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_6221 a5e443d178f801c604e179fce953182a 931 SMART SM00028 722 755 18.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_6221 a5e443d178f801c604e179fce953182a 931 SMART SM00028 880 913 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_6221 a5e443d178f801c604e179fce953182a 931 SMART SM00028 800 833 1.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_6221 a5e443d178f801c604e179fce953182a 931 Pfam PF03704 Bacterial transcriptional activator domain 114 255 1.9E-35 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_6221 a5e443d178f801c604e179fce953182a 931 Pfam PF00931 NB-ARC domain 301 538 9.7E-11 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 Amir_6221 a5e443d178f801c604e179fce953182a 931 SUPERFAMILY SSF48452 113 273 1.22E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6221 a5e443d178f801c604e179fce953182a 931 SUPERFAMILY SSF52540 279 534 1.15E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6221 a5e443d178f801c604e179fce953182a 931 Gene3D G3DSA:3.40.50.300 290 428 2.4E-6 T 14-10-2018 Amir_6221 a5e443d178f801c604e179fce953182a 931 SUPERFAMILY SSF46894 19 107 1.08E-12 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_6221 a5e443d178f801c604e179fce953182a 931 Gene3D G3DSA:1.25.40.10 112 281 3.5E-42 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6221 a5e443d178f801c604e179fce953182a 931 Gene3D G3DSA:1.25.40.10 639 750 1.5E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6221 a5e443d178f801c604e179fce953182a 931 Gene3D G3DSA:1.25.40.10 751 922 2.2E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6221 a5e443d178f801c604e179fce953182a 931 SMART SM00382 301 439 0.0018 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6221 a5e443d178f801c604e179fce953182a 931 SUPERFAMILY SSF48452 717 912 4.4E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6234 a3728bbae9caeb5aaa70329b514bb705 234 Pfam PF06259 Alpha/beta hydrolase 22 182 8.7E-37 T 14-10-2018 IPR010427 Protein of unknown function DUF1023 Amir_6234 a3728bbae9caeb5aaa70329b514bb705 234 SUPERFAMILY SSF53474 83 183 9.09E-7 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5769 960252756809f9f2e4109e3233b376b4 362 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 15 349 4.6E-90 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_5769 960252756809f9f2e4109e3233b376b4 362 Pfam PF00953 Glycosyl transferase family 4 89 279 2.2E-36 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Amir_5769 960252756809f9f2e4109e3233b376b4 362 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 353 22.892 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_5769 960252756809f9f2e4109e3233b376b4 362 ProSitePatterns PS01347 MraY family signature 1. 46 58 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_5769 960252756809f9f2e4109e3233b376b4 362 ProSitePatterns PS01348 MraY family signature 2. 182 193 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_5769 960252756809f9f2e4109e3233b376b4 362 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 46 58 7.3E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_3917 e94872d26cead3010f02e45fedc4aab3 424 Gene3D G3DSA:1.20.1250.20 231 416 3.2E-10 T 14-10-2018 Amir_3917 e94872d26cead3010f02e45fedc4aab3 424 SUPERFAMILY SSF103473 13 412 5.89E-40 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_3917 e94872d26cead3010f02e45fedc4aab3 424 Pfam PF07690 Major Facilitator Superfamily 39 344 1.0E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_3917 e94872d26cead3010f02e45fedc4aab3 424 Gene3D G3DSA:1.20.1250.20 25 215 5.2E-11 T 14-10-2018 Amir_2843 fb98c3b7a7dbe7b8f571584f2027e22b 126 Gene3D G3DSA:3.30.1330.40 5 126 3.6E-29 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_2843 fb98c3b7a7dbe7b8f571584f2027e22b 126 SUPERFAMILY SSF55298 9 125 2.83E-28 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_2843 fb98c3b7a7dbe7b8f571584f2027e22b 126 Pfam PF01042 Endoribonuclease L-PSP 12 125 8.5E-18 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Amir_3098 a26402315449e62e0b87764b09e70031 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 177 5.1E-14 T 14-10-2018 Amir_3098 a26402315449e62e0b87764b09e70031 214 Gene3D G3DSA:1.10.150.240 21 80 1.9E-47 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Amir_3098 a26402315449e62e0b87764b09e70031 214 SUPERFAMILY SSF56784 8 199 1.44E-39 T 14-10-2018 IPR036412 HAD-like superfamily Amir_3098 a26402315449e62e0b87764b09e70031 214 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 8 178 5.3E-18 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_3098 a26402315449e62e0b87764b09e70031 214 Gene3D G3DSA:3.40.50.1000 7 199 1.9E-47 T 14-10-2018 IPR023214 HAD superfamily Amir_1916 41f9d9c3520b893e4b734751f7f16d26 98 Gene3D G3DSA:3.30.160.100 9 98 2.9E-7 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like Amir_1916 41f9d9c3520b893e4b734751f7f16d26 98 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 18 97 5.2E-5 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Amir_1916 41f9d9c3520b893e4b734751f7f16d26 98 SUPERFAMILY SSF69754 18 96 1.57E-9 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like Amir_2297 b9bf213f05bb4c76088a862d535adca3 134 SUPERFAMILY SSF55874 38 113 2.8E-5 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2297 b9bf213f05bb4c76088a862d535adca3 134 Gene3D G3DSA:3.30.565.10 9 133 4.6E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6610 a78ad6e26386c91a3df7701344717079 93 SUPERFAMILY SSF54570 3 83 3.14E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6610 a78ad6e26386c91a3df7701344717079 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 4.5E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6610 a78ad6e26386c91a3df7701344717079 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 4.5E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6610 a78ad6e26386c91a3df7701344717079 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 4.5E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6610 a78ad6e26386c91a3df7701344717079 93 Pfam PF00203 Ribosomal protein S19 3 83 3.4E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6610 a78ad6e26386c91a3df7701344717079 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.078 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6610 a78ad6e26386c91a3df7701344717079 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6610 a78ad6e26386c91a3df7701344717079 93 PIRSF PIRSF002144 1 93 1.4E-30 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6610 a78ad6e26386c91a3df7701344717079 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 1.2E-47 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 Amir_6610 a78ad6e26386c91a3df7701344717079 93 Gene3D G3DSA:3.30.860.10 1 93 8.9E-40 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_3259 ff40a3052379ba7a07893386ae6dfe9b 329 Pfam PF17236 Family of unknown function (DUF5309) 22 103 2.9E-11 T 14-10-2018 IPR035198 Protein of unknown function DUF5309 Amir_3259 ff40a3052379ba7a07893386ae6dfe9b 329 Pfam PF17236 Family of unknown function (DUF5309) 123 319 1.0E-31 T 14-10-2018 IPR035198 Protein of unknown function DUF5309 Amir_1033 1c8d41f64c8b0e0b9b3e5116570209ef 235 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 6 198 5.4E-33 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Amir_1033 1c8d41f64c8b0e0b9b3e5116570209ef 235 Gene3D G3DSA:3.40.50.880 14 209 2.9E-9 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_1033 1c8d41f64c8b0e0b9b3e5116570209ef 235 SUPERFAMILY SSF52317 17 213 3.48E-21 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_3880 6654e6677bc12a5269f633ef0275b935 1391 Pfam PF07591 Pretoxin HINT domain 1128 1263 1.1E-19 T 14-10-2018 Amir_3880 6654e6677bc12a5269f633ef0275b935 1391 Gene3D G3DSA:2.170.16.10 1117 1262 1.4E-37 T 14-10-2018 Amir_3880 6654e6677bc12a5269f633ef0275b935 1391 Pfam PF03752 Short repeats of unknown function 44 83 2.4E-14 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_3880 6654e6677bc12a5269f633ef0275b935 1391 Pfam PF03752 Short repeats of unknown function 690 730 9.1E-13 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_3880 6654e6677bc12a5269f633ef0275b935 1391 Pfam PF03752 Short repeats of unknown function 137 177 8.6E-15 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_3880 6654e6677bc12a5269f633ef0275b935 1391 Pfam PF03752 Short repeats of unknown function 551 591 2.3E-8 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_3880 6654e6677bc12a5269f633ef0275b935 1391 Pfam PF03752 Short repeats of unknown function 644 684 2.3E-15 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_3880 6654e6677bc12a5269f633ef0275b935 1391 Pfam PF03752 Short repeats of unknown function 90 129 1.4E-9 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_3880 6654e6677bc12a5269f633ef0275b935 1391 SUPERFAMILY SSF51294 1120 1261 3.01E-15 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amir_5313 561daba9f33635bd1ccf4c60bdc9e879 1013 PRINTS PR01950 LanC-like protein superfamily signature 831 847 1.8E-6 T 14-10-2018 IPR007822 Lanthionine synthetase C-like Amir_5313 561daba9f33635bd1ccf4c60bdc9e879 1013 PRINTS PR01950 LanC-like protein superfamily signature 981 998 1.8E-6 T 14-10-2018 IPR007822 Lanthionine synthetase C-like Amir_5313 561daba9f33635bd1ccf4c60bdc9e879 1013 PRINTS PR01950 LanC-like protein superfamily signature 644 662 1.8E-6 T 14-10-2018 IPR007822 Lanthionine synthetase C-like Amir_5313 561daba9f33635bd1ccf4c60bdc9e879 1013 PRINTS PR01950 LanC-like protein superfamily signature 927 940 1.8E-6 T 14-10-2018 IPR007822 Lanthionine synthetase C-like Amir_5313 561daba9f33635bd1ccf4c60bdc9e879 1013 SMART SM01260 641 1009 6.2E-50 T 14-10-2018 IPR007822 Lanthionine synthetase C-like Amir_5313 561daba9f33635bd1ccf4c60bdc9e879 1013 PRINTS PR01955 Frankia sp. LanC-like protein signature 645 660 5.6E-6 T 14-10-2018 Amir_5313 561daba9f33635bd1ccf4c60bdc9e879 1013 PRINTS PR01955 Frankia sp. LanC-like protein signature 982 999 5.6E-6 T 14-10-2018 Amir_5313 561daba9f33635bd1ccf4c60bdc9e879 1013 PRINTS PR01955 Frankia sp. LanC-like protein signature 926 946 5.6E-6 T 14-10-2018 Amir_5313 561daba9f33635bd1ccf4c60bdc9e879 1013 PIRSF PIRSF037228 75 732 3.7E-117 T 14-10-2018 IPR017146 Type 2 lantibiotic biosynthesis protein LanM Amir_5313 561daba9f33635bd1ccf4c60bdc9e879 1013 PIRSF PIRSF037228 792 1013 3.3E-24 T 14-10-2018 IPR017146 Type 2 lantibiotic biosynthesis protein LanM Amir_5313 561daba9f33635bd1ccf4c60bdc9e879 1013 SUPERFAMILY SSF158745 623 724 3.01E-14 T 14-10-2018 Amir_5313 561daba9f33635bd1ccf4c60bdc9e879 1013 Pfam PF05147 Lanthionine synthetase C-like protein 833 1009 4.7E-17 T 14-10-2018 IPR007822 Lanthionine synthetase C-like Amir_5313 561daba9f33635bd1ccf4c60bdc9e879 1013 SUPERFAMILY SSF158745 789 1011 1.31E-18 T 14-10-2018 Amir_5313 561daba9f33635bd1ccf4c60bdc9e879 1013 TIGRFAM TIGR03897 lanti_2_LanM: type 2 lantibiotic biosynthesis protein LanM 87 999 6.6E-182 T 14-10-2018 IPR017146 Type 2 lantibiotic biosynthesis protein LanM Amir_5313 561daba9f33635bd1ccf4c60bdc9e879 1013 Pfam PF13575 Domain of unknown function (DUF4135) 148 512 1.0E-110 T 14-10-2018 IPR025410 Lantibiotic biosynthesis protein, dehydration domain Amir_5817 e0aaff916c8088fb732b8040ee4dc1df 406 Pfam PF06224 Winged helix DNA-binding domain 40 382 7.3E-73 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 Amir_5307 2feac284f516a016f68b1d51cfba8372 267 SUPERFAMILY SSF161098 3 267 2.43E-51 T 14-10-2018 IPR035906 MetI-like superfamily Amir_5307 2feac284f516a016f68b1d51cfba8372 267 Gene3D G3DSA:1.10.3720.10 1 254 9.1E-46 T 14-10-2018 IPR035906 MetI-like superfamily Amir_5307 2feac284f516a016f68b1d51cfba8372 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 253 5.8E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_3866 c7246942abe480edc598287ea96412b4 518 Pfam PF14028 Lantibiotic biosynthesis dehydratase C-term 13 269 8.8E-28 T 14-10-2018 IPR023809 Thiopeptide-type bacteriocin biosynthesis domain Amir_3866 c7246942abe480edc598287ea96412b4 518 Pfam PF00881 Nitroreductase family 336 514 3.9E-5 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amir_3866 c7246942abe480edc598287ea96412b4 518 Gene3D G3DSA:3.40.109.10 321 518 6.8E-35 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_3866 c7246942abe480edc598287ea96412b4 518 SUPERFAMILY SSF55469 331 515 1.14E-10 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_3866 c7246942abe480edc598287ea96412b4 518 TIGRFAM TIGR03891 thiopep_ocin: thiopeptide-type bacteriocin biosynthesis domain 105 267 1.5E-13 T 14-10-2018 IPR023809 Thiopeptide-type bacteriocin biosynthesis domain Amir_1470 54b99901663d8420c72a8e9cbb1f2add 274 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 256 2.4E-49 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_1470 54b99901663d8420c72a8e9cbb1f2add 274 Gene3D G3DSA:3.40.190.10 34 253 1.1E-62 T 14-10-2018 Amir_1470 54b99901663d8420c72a8e9cbb1f2add 274 Gene3D G3DSA:3.40.190.10 127 220 1.1E-62 T 14-10-2018 Amir_1470 54b99901663d8420c72a8e9cbb1f2add 274 SUPERFAMILY SSF53850 10 255 6.72E-55 T 14-10-2018 Amir_1470 54b99901663d8420c72a8e9cbb1f2add 274 SMART SM00079 37 253 0.0016 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Amir_1470 54b99901663d8420c72a8e9cbb1f2add 274 SMART SM00062 37 262 1.4E-62 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_0078 e183ccfa4ad35e04666f158dc5360939 232 SUPERFAMILY SSF51695 3 226 1.1E-57 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amir_0078 e183ccfa4ad35e04666f158dc5360939 232 Gene3D G3DSA:3.20.20.190 1 230 1.2E-56 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amir_0078 e183ccfa4ad35e04666f158dc5360939 232 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 219 2.6E-28 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Amir_4503 571759d75952e75af8438280e5ad481f 639 SMART SM00823 Phosphopantetheine attachment site 548 617 3.1E-8 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4503 571759d75952e75af8438280e5ad481f 639 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 58 458 1.3E-116 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_4503 571759d75952e75af8438280e5ad481f 639 Pfam PF00501 AMP-binding enzyme 39 434 1.8E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4503 571759d75952e75af8438280e5ad481f 639 ProSitePatterns PS00455 Putative AMP-binding domain signature. 172 183 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4503 571759d75952e75af8438280e5ad481f 639 Pfam PF00550 Phosphopantetheine attachment site 550 612 2.5E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4503 571759d75952e75af8438280e5ad481f 639 SUPERFAMILY SSF56801 27 561 1.05E-140 T 14-10-2018 Amir_4503 571759d75952e75af8438280e5ad481f 639 Pfam PF13193 AMP-binding enzyme C-terminal domain 442 517 6.8E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_4503 571759d75952e75af8438280e5ad481f 639 Gene3D G3DSA:3.40.50.12780 28 426 7.5E-119 T 14-10-2018 Amir_4503 571759d75952e75af8438280e5ad481f 639 Gene3D G3DSA:3.30.300.30 428 531 1.6E-32 T 14-10-2018 Amir_4503 571759d75952e75af8438280e5ad481f 639 SUPERFAMILY SSF47336 542 613 2.88E-20 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4503 571759d75952e75af8438280e5ad481f 639 Gene3D G3DSA:3.40.50.1820 537 637 7.5E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6196 ef643353a095fe91725ebcb72cd1af65 140 Gene3D G3DSA:3.30.70.1060 1 118 4.3E-32 T 14-10-2018 Amir_6196 ef643353a095fe91725ebcb72cd1af65 140 SUPERFAMILY SSF54909 1 115 1.85E-33 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_6196 ef643353a095fe91725ebcb72cd1af65 140 Pfam PF03795 YCII-related domain 1 113 8.6E-23 T 14-10-2018 IPR005545 YCII-related Amir_3498 c633049ff5613aa54b499cb9b9d959ad 374 SUPERFAMILY SSF159501 10 371 2.88E-62 T 14-10-2018 Amir_3498 c633049ff5613aa54b499cb9b9d959ad 374 Pfam PF05139 Erythromycin esterase 42 370 8.0E-48 T 14-10-2018 IPR007815 Erythromycin esterase GO:0046677 Amir_3498 c633049ff5613aa54b499cb9b9d959ad 374 Gene3D G3DSA:3.30.1870.10 44 118 3.6E-5 T 14-10-2018 Amir_6514 6f7403466d66db5463c0a537be648e05 96 Pfam PF01817 Chorismate mutase type II 24 77 1.7E-8 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Amir_6514 6f7403466d66db5463c0a537be648e05 96 SUPERFAMILY SSF48600 19 84 9.62E-12 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Amir_6514 6f7403466d66db5463c0a537be648e05 96 TIGRFAM TIGR01808 CM_M_hiGC-arch: chorismate mutase 20 92 3.5E-31 T 14-10-2018 IPR010958 Chorismate mutase, high GC Gram-positive bacteria/archaeal Amir_6514 6f7403466d66db5463c0a537be648e05 96 Gene3D G3DSA:1.20.59.10 10 96 1.1E-24 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Amir_6514 6f7403466d66db5463c0a537be648e05 96 SMART SM00830 24 86 2.1E-4 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Amir_3001 d960260459101ffe40d05e0add0918a1 207 Gene3D G3DSA:1.10.10.60 3 55 2.1E-24 T 14-10-2018 Amir_3001 d960260459101ffe40d05e0add0918a1 207 Pfam PF16859 Bacterial transcriptional repressor C-terminal 76 183 1.9E-20 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Amir_3001 d960260459101ffe40d05e0add0918a1 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 4.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3001 d960260459101ffe40d05e0add0918a1 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 4.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3001 d960260459101ffe40d05e0add0918a1 207 SUPERFAMILY SSF46689 7 64 1.01E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3001 d960260459101ffe40d05e0add0918a1 207 SUPERFAMILY SSF48498 80 191 2.56E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3001 d960260459101ffe40d05e0add0918a1 207 Gene3D G3DSA:1.10.357.10 56 197 1.0E-23 T 14-10-2018 Amir_3001 d960260459101ffe40d05e0add0918a1 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 1.3E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4621 8e0f9e621d58e22582b82cadca9af1c7 497 SUPERFAMILY SSF50370 356 491 1.41E-39 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_4621 8e0f9e621d58e22582b82cadca9af1c7 497 Gene3D G3DSA:2.80.10.50 320 447 4.0E-24 T 14-10-2018 Amir_4621 8e0f9e621d58e22582b82cadca9af1c7 497 Gene3D G3DSA:2.80.10.50 448 497 8.2E-14 T 14-10-2018 Amir_4621 8e0f9e621d58e22582b82cadca9af1c7 497 Gene3D G3DSA:3.20.20.80 42 319 9.2E-37 T 14-10-2018 Amir_4621 8e0f9e621d58e22582b82cadca9af1c7 497 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 85 304 2.9E-15 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 Amir_4621 8e0f9e621d58e22582b82cadca9af1c7 497 SUPERFAMILY SSF51445 45 323 4.47E-30 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_4621 8e0f9e621d58e22582b82cadca9af1c7 497 SMART SM00458 358 493 1.4E-10 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4621 8e0f9e621d58e22582b82cadca9af1c7 497 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 440 493 3.4E-12 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4621 8e0f9e621d58e22582b82cadca9af1c7 497 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 356 434 1.6E-19 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_1160 c59120d5aba155a16afaa66290b3d4ed 516 Pfam PF13450 NAD(P)-binding Rossmann-like domain 9 46 4.7E-8 T 14-10-2018 Amir_1160 c59120d5aba155a16afaa66290b3d4ed 516 Gene3D G3DSA:3.50.50.60 183 303 2.0E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1160 c59120d5aba155a16afaa66290b3d4ed 516 Gene3D G3DSA:3.50.50.60 5 102 3.8E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1160 c59120d5aba155a16afaa66290b3d4ed 516 SUPERFAMILY SSF51905 5 512 4.91E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4650 e545bd71834fb0a4c8a01599e1e7982f 534 Pfam PF00501 AMP-binding enzyme 34 424 2.1E-39 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4650 e545bd71834fb0a4c8a01599e1e7982f 534 Gene3D G3DSA:3.40.50.12780 11 296 1.7E-29 T 14-10-2018 Amir_4650 e545bd71834fb0a4c8a01599e1e7982f 534 Gene3D G3DSA:3.40.50.12780 297 417 2.5E-10 T 14-10-2018 Amir_4650 e545bd71834fb0a4c8a01599e1e7982f 534 SUPERFAMILY SSF56801 26 523 1.57E-57 T 14-10-2018 Amir_4301 891974d6a4d872f3d2e7d3191ec13bc1 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 225 237 1.5E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4301 891974d6a4d872f3d2e7d3191ec13bc1 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 209 225 1.5E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4301 891974d6a4d872f3d2e7d3191ec13bc1 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 209 1.5E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4301 891974d6a4d872f3d2e7d3191ec13bc1 261 Gene3D G3DSA:1.10.10.10 128 258 1.4E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4301 891974d6a4d872f3d2e7d3191ec13bc1 261 Pfam PF00196 Bacterial regulatory proteins, luxR family 194 240 7.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4301 891974d6a4d872f3d2e7d3191ec13bc1 261 SUPERFAMILY SSF46894 185 241 1.12E-12 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4301 891974d6a4d872f3d2e7d3191ec13bc1 261 SMART SM00421 192 254 2.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1451 1dfc62d19363c2ab68acc326fdf0c5c2 290 SUPERFAMILY SSF161098 62 265 1.31E-38 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1451 1dfc62d19363c2ab68acc326fdf0c5c2 290 Gene3D G3DSA:1.10.3720.10 50 269 2.1E-48 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1451 1dfc62d19363c2ab68acc326fdf0c5c2 290 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 63 156 3.4E-22 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Amir_1451 1dfc62d19363c2ab68acc326fdf0c5c2 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 265 2.4E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_1995 d9870cc844bde434240d60a7f49ac742 344 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 95 3.6E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_1995 d9870cc844bde434240d60a7f49ac742 344 SUPERFAMILY SSF51735 136 305 4.27E-10 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1995 d9870cc844bde434240d60a7f49ac742 344 Gene3D G3DSA:3.90.180.10 32 98 1.9E-11 T 14-10-2018 Amir_1995 d9870cc844bde434240d60a7f49ac742 344 Gene3D G3DSA:3.90.180.10 99 334 6.2E-18 T 14-10-2018 Amir_1995 d9870cc844bde434240d60a7f49ac742 344 Gene3D G3DSA:3.40.50.720 140 289 6.2E-18 T 14-10-2018 Amir_1995 d9870cc844bde434240d60a7f49ac742 344 SUPERFAMILY SSF50129 35 166 1.73E-16 T 14-10-2018 IPR011032 GroES-like superfamily Amir_0723 f4443eb75a7ca43c80188bcb7451077a 254 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 63 78 1.5E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_0723 f4443eb75a7ca43c80188bcb7451077a 254 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 111 125 1.5E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_0723 f4443eb75a7ca43c80188bcb7451077a 254 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 195 207 1.5E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_0723 f4443eb75a7ca43c80188bcb7451077a 254 Gene3D G3DSA:2.40.10.10 37 113 4.3E-17 T 14-10-2018 Amir_0723 f4443eb75a7ca43c80188bcb7451077a 254 Pfam PF00089 Trypsin 38 247 1.2E-35 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_0723 f4443eb75a7ca43c80188bcb7451077a 254 SUPERFAMILY SSF50494 35 251 3.6E-47 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_0723 f4443eb75a7ca43c80188bcb7451077a 254 Gene3D G3DSA:2.40.10.10 114 251 8.3E-23 T 14-10-2018 Amir_0723 f4443eb75a7ca43c80188bcb7451077a 254 SMART SM00020 36 247 5.3E-32 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_5978 2b0bf3180d2b1be16aa71363fcf3b29d 545 Gene3D G3DSA:1.25.40.340 2 199 2.2E-11 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amir_5978 2b0bf3180d2b1be16aa71363fcf3b29d 545 SMART SM01120 34 197 2.0E-45 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amir_5978 2b0bf3180d2b1be16aa71363fcf3b29d 545 Pfam PF02734 DAK2 domain 34 196 5.6E-33 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amir_5978 2b0bf3180d2b1be16aa71363fcf3b29d 545 SUPERFAMILY SSF101473 4 198 3.53E-34 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amir_5978 2b0bf3180d2b1be16aa71363fcf3b29d 545 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 10 545 7.1E-130 T 14-10-2018 IPR019986 DAK2 domain-containing protein YloV Amir_5978 2b0bf3180d2b1be16aa71363fcf3b29d 545 Pfam PF13684 Dihydroxyacetone kinase family 230 545 1.5E-74 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain Amir_5978 2b0bf3180d2b1be16aa71363fcf3b29d 545 SMART SM01121 229 545 4.0E-69 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain Amir_1606 f4842c77f466431ed23272b9888407c6 153 SUPERFAMILY SSF54637 4 149 1.12E-38 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_1606 f4842c77f466431ed23272b9888407c6 153 Gene3D G3DSA:3.10.129.10 2 152 1.6E-47 T 14-10-2018 Amir_1606 f4842c77f466431ed23272b9888407c6 153 Pfam PF01575 MaoC like domain 11 120 6.9E-26 T 14-10-2018 IPR002539 MaoC-like dehydratase domain Amir_0109 336de1e2806c0d5868c378b8f71c66cf 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 152 1.7E-25 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amir_0109 336de1e2806c0d5868c378b8f71c66cf 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 1.7E-25 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amir_0109 336de1e2806c0d5868c378b8f71c66cf 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 1.7E-25 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amir_0109 336de1e2806c0d5868c378b8f71c66cf 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 124 1.7E-25 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amir_0109 336de1e2806c0d5868c378b8f71c66cf 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 136 1.7E-25 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amir_0109 336de1e2806c0d5868c378b8f71c66cf 182 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 178 6.8E-43 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amir_0109 336de1e2806c0d5868c378b8f71c66cf 182 Gene3D G3DSA:2.40.100.10 11 180 2.6E-68 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Amir_0109 336de1e2806c0d5868c378b8f71c66cf 182 SUPERFAMILY SSF50891 15 179 9.79E-59 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Amir_0109 336de1e2806c0d5868c378b8f71c66cf 182 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Amir_0109 336de1e2806c0d5868c378b8f71c66cf 182 PIRSF PIRSF001467 2 182 1.8E-54 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Amir_1147 8e12c50bf497274819f893f98a1e5498 267 SMART SM00898 2 106 1.4E-14 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Amir_1147 8e12c50bf497274819f893f98a1e5498 267 Gene3D G3DSA:3.20.190.10 2 118 3.5E-9 T 14-10-2018 IPR035937 MutM-like, N-terminal Amir_1147 8e12c50bf497274819f893f98a1e5498 267 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 120 205 3.1E-20 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Amir_1147 8e12c50bf497274819f893f98a1e5498 267 SUPERFAMILY SSF81624 2 121 5.23E-19 T 14-10-2018 IPR035937 MutM-like, N-terminal Amir_1147 8e12c50bf497274819f893f98a1e5498 267 Gene3D G3DSA:1.10.8.50 122 266 1.9E-41 T 14-10-2018 Amir_1147 8e12c50bf497274819f893f98a1e5498 267 Pfam PF06827 Zinc finger found in FPG and IleRS 238 265 4.5E-10 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Amir_1147 8e12c50bf497274819f893f98a1e5498 267 ProSitePatterns PS01242 Zinc finger FPG-type signature. 241 265 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 Amir_1147 8e12c50bf497274819f893f98a1e5498 267 SUPERFAMILY SSF46946 119 204 3.39E-23 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Amir_1147 8e12c50bf497274819f893f98a1e5498 267 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 90 2.2E-6 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Amir_1147 8e12c50bf497274819f893f98a1e5498 267 SUPERFAMILY SSF57716 219 265 3.97E-14 T 14-10-2018 Amir_1147 8e12c50bf497274819f893f98a1e5498 267 SMART SM01232 120 212 1.8E-31 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Amir_0630 8a6d8c248c0910a7e83c80edb3b17a1b 219 SUPERFAMILY SSF55729 28 197 1.0E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_0630 8a6d8c248c0910a7e83c80edb3b17a1b 219 Gene3D G3DSA:3.40.630.30 26 200 2.0E-39 T 14-10-2018 Amir_0630 8a6d8c248c0910a7e83c80edb3b17a1b 219 Pfam PF13302 Acetyltransferase (GNAT) domain 29 173 7.8E-15 T 14-10-2018 IPR000182 GNAT domain Amir_4872 560b31737ea1ed4155811ebe27a1f6dc 742 SUPERFAMILY SSF52279 311 545 2.48E-46 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Amir_4872 560b31737ea1ed4155811ebe27a1f6dc 742 Gene3D G3DSA:3.20.20.300 10 296 3.1E-102 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Amir_4872 560b31737ea1ed4155811ebe27a1f6dc 742 SUPERFAMILY SSF51445 31 309 2.95E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_4872 560b31737ea1ed4155811ebe27a1f6dc 742 Gene3D G3DSA:2.60.40.10 543 657 2.7E-36 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_4872 560b31737ea1ed4155811ebe27a1f6dc 742 Gene3D G3DSA:3.40.50.1700 297 542 3.3E-67 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Amir_4872 560b31737ea1ed4155811ebe27a1f6dc 742 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 31 279 6.0E-51 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4872 560b31737ea1ed4155811ebe27a1f6dc 742 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 311 542 4.7E-48 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 Amir_4872 560b31737ea1ed4155811ebe27a1f6dc 742 SMART SM01217 575 645 1.1E-30 T 14-10-2018 IPR026891 Fibronectin type III-like domain Amir_4872 560b31737ea1ed4155811ebe27a1f6dc 742 PRINTS PR00133 Glycosyl hydrolase family 3 signature 66 85 6.6E-32 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4872 560b31737ea1ed4155811ebe27a1f6dc 742 PRINTS PR00133 Glycosyl hydrolase family 3 signature 143 159 6.6E-32 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4872 560b31737ea1ed4155811ebe27a1f6dc 742 PRINTS PR00133 Glycosyl hydrolase family 3 signature 213 231 6.6E-32 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4872 560b31737ea1ed4155811ebe27a1f6dc 742 PRINTS PR00133 Glycosyl hydrolase family 3 signature 30 46 6.6E-32 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4872 560b31737ea1ed4155811ebe27a1f6dc 742 PRINTS PR00133 Glycosyl hydrolase family 3 signature 112 128 6.6E-32 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4872 560b31737ea1ed4155811ebe27a1f6dc 742 Pfam PF14310 Fibronectin type III-like domain 575 645 4.0E-25 T 14-10-2018 IPR026891 Fibronectin type III-like domain Amir_3701 44d9e019339222784f1d0ae7d46bcf68 139 SUPERFAMILY SSF54427 4 126 2.06E-25 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_3701 44d9e019339222784f1d0ae7d46bcf68 139 Pfam PF13577 SnoaL-like domain 5 121 4.5E-16 T 14-10-2018 IPR037401 SnoaL-like domain Amir_3701 44d9e019339222784f1d0ae7d46bcf68 139 Gene3D G3DSA:3.10.450.50 5 129 4.7E-24 T 14-10-2018 Amir_4752 e1287264ec2f69b67f078f15669b7592 455 SUPERFAMILY SSF49503 195 330 4.8E-35 T 14-10-2018 IPR008972 Cupredoxin Amir_4752 e1287264ec2f69b67f078f15669b7592 455 Gene3D G3DSA:2.60.40.420 173 312 6.2E-38 T 14-10-2018 IPR008972 Cupredoxin Amir_4752 e1287264ec2f69b67f078f15669b7592 455 Pfam PF07732 Multicopper oxidase 205 314 1.9E-15 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 Amir_4752 e1287264ec2f69b67f078f15669b7592 455 Gene3D G3DSA:2.60.40.420 313 455 2.9E-54 T 14-10-2018 IPR008972 Cupredoxin Amir_4752 e1287264ec2f69b67f078f15669b7592 455 PRINTS PR00695 Copper containing nitrite reductase signature 222 238 6.4E-10 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 Amir_4752 e1287264ec2f69b67f078f15669b7592 455 PRINTS PR00695 Copper containing nitrite reductase signature 279 294 6.4E-10 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 Amir_4752 e1287264ec2f69b67f078f15669b7592 455 PRINTS PR00695 Copper containing nitrite reductase signature 296 312 6.4E-10 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 Amir_4752 e1287264ec2f69b67f078f15669b7592 455 SUPERFAMILY SSF49503 57 141 3.56E-11 T 14-10-2018 IPR008972 Cupredoxin Amir_4752 e1287264ec2f69b67f078f15669b7592 455 SUPERFAMILY SSF49503 314 455 3.1E-37 T 14-10-2018 IPR008972 Cupredoxin Amir_4752 e1287264ec2f69b67f078f15669b7592 455 Gene3D G3DSA:2.60.40.420 42 145 4.1E-12 T 14-10-2018 IPR008972 Cupredoxin Amir_7008 473509a0e572e05aa37cada5d8d3fcbf 402 Pfam PF07730 Histidine kinase 197 262 6.8E-19 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_7008 473509a0e572e05aa37cada5d8d3fcbf 402 SUPERFAMILY SSF55874 286 399 5.61E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_7008 473509a0e572e05aa37cada5d8d3fcbf 402 SMART SM00387 306 401 0.0064 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_7008 473509a0e572e05aa37cada5d8d3fcbf 402 Gene3D G3DSA:3.30.565.10 272 399 2.1E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2622 42f6730d37fa3113f798ed7d623d8e61 790 Gene3D G3DSA:2.30.110.10 616 789 7.7E-35 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_2622 42f6730d37fa3113f798ed7d623d8e61 790 SUPERFAMILY SSF50475 625 778 2.06E-31 T 14-10-2018 Amir_2622 42f6730d37fa3113f798ed7d623d8e61 790 PRINTS PR01036 Tetracycline resistance protein TetB signature 334 354 1.3E-8 T 14-10-2018 Amir_2622 42f6730d37fa3113f798ed7d623d8e61 790 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 1.3E-8 T 14-10-2018 Amir_2622 42f6730d37fa3113f798ed7d623d8e61 790 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 1.3E-8 T 14-10-2018 Amir_2622 42f6730d37fa3113f798ed7d623d8e61 790 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 1.3E-8 T 14-10-2018 Amir_2622 42f6730d37fa3113f798ed7d623d8e61 790 Gene3D G3DSA:1.20.1720.10 14 200 4.2E-48 T 14-10-2018 Amir_2622 42f6730d37fa3113f798ed7d623d8e61 790 Pfam PF07690 Major Facilitator Superfamily 17 407 4.1E-49 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2622 42f6730d37fa3113f798ed7d623d8e61 790 SMART SM00904 440 574 2.4E-37 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Amir_2622 42f6730d37fa3113f798ed7d623d8e61 790 Gene3D G3DSA:1.20.1250.20 256 445 6.5E-17 T 14-10-2018 Amir_2622 42f6730d37fa3113f798ed7d623d8e61 790 Pfam PF01687 Riboflavin kinase 451 569 1.8E-28 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Amir_2622 42f6730d37fa3113f798ed7d623d8e61 790 SUPERFAMILY SSF82114 451 575 3.92E-33 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Amir_2622 42f6730d37fa3113f798ed7d623d8e61 790 Gene3D G3DSA:2.40.30.30 449 582 3.3E-38 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Amir_2622 42f6730d37fa3113f798ed7d623d8e61 790 SMART SM00903 632 778 1.4E-34 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amir_2622 42f6730d37fa3113f798ed7d623d8e61 790 SUPERFAMILY SSF103473 6 443 6.15E-62 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2622 42f6730d37fa3113f798ed7d623d8e61 790 Pfam PF01613 Flavin reductase like domain 634 779 2.5E-22 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amir_6681 a7dc09395fc05b87ffd5d8672df1a6e8 182 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 1.0E-71 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6681 a7dc09395fc05b87ffd5d8672df1a6e8 182 Gene3D G3DSA:3.40.50.12280 2 169 1.1E-76 T 14-10-2018 Amir_6681 a7dc09395fc05b87ffd5d8672df1a6e8 182 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 43.942 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6681 a7dc09395fc05b87ffd5d8672df1a6e8 182 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6681 a7dc09395fc05b87ffd5d8672df1a6e8 182 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 5.2E-25 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6681 a7dc09395fc05b87ffd5d8672df1a6e8 182 SUPERFAMILY SSF56770 9 154 3.4E-68 T 14-10-2018 Amir_5155 0473fd943d78c5fd4bef80099ee672df 238 SUPERFAMILY SSF46785 17 203 7.16E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5155 0473fd943d78c5fd4bef80099ee672df 238 Gene3D G3DSA:1.10.10.10 12 144 1.1E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5155 0473fd943d78c5fd4bef80099ee672df 238 Pfam PF13412 Winged helix-turn-helix DNA-binding 20 60 1.5E-7 T 14-10-2018 Amir_1544 0fb5674de3a4a5135089b2aa7b01485c 406 Gene3D G3DSA:3.40.47.10 142 391 2.5E-121 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_1544 0fb5674de3a4a5135089b2aa7b01485c 406 Pfam PF00108 Thiolase, N-terminal domain 13 265 1.5E-54 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Amir_1544 0fb5674de3a4a5135089b2aa7b01485c 406 ProSitePatterns PS00737 Thiolases signature 2. 344 360 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Amir_1544 0fb5674de3a4a5135089b2aa7b01485c 406 Gene3D G3DSA:3.40.47.10 13 279 2.5E-121 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_1544 0fb5674de3a4a5135089b2aa7b01485c 406 SUPERFAMILY SSF53901 10 271 1.01E-60 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_1544 0fb5674de3a4a5135089b2aa7b01485c 406 Pfam PF02803 Thiolase, C-terminal domain 278 397 9.6E-36 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Amir_1544 0fb5674de3a4a5135089b2aa7b01485c 406 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 397 1.8E-124 T 14-10-2018 IPR002155 Thiolase GO:0016747 Amir_1544 0fb5674de3a4a5135089b2aa7b01485c 406 SUPERFAMILY SSF53901 277 397 3.63E-38 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_1544 0fb5674de3a4a5135089b2aa7b01485c 406 PIRSF PIRSF000429 7 400 2.0E-119 T 14-10-2018 IPR002155 Thiolase GO:0016747 Amir_4446 3d123a182ed8b342ac91df633932a0fd 121 Gene3D G3DSA:3.10.450.50 2 121 3.3E-30 T 14-10-2018 Amir_4446 3d123a182ed8b342ac91df633932a0fd 121 Pfam PF14534 Domain of unknown function (DUF4440) 4 111 4.1E-14 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 Amir_4446 3d123a182ed8b342ac91df633932a0fd 121 SUPERFAMILY SSF54427 3 116 1.12E-22 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_4446 3d123a182ed8b342ac91df633932a0fd 121 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 6 115 5.4E-9 T 14-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 Amir_4268 46558ebf2115413342ee8e99e07abee9 135 Gene3D G3DSA:3.30.1330.40 1 135 5.2E-28 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_4268 46558ebf2115413342ee8e99e07abee9 135 Pfam PF01042 Endoribonuclease L-PSP 16 133 3.3E-18 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Amir_4268 46558ebf2115413342ee8e99e07abee9 135 SUPERFAMILY SSF55298 4 134 1.57E-25 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_4195 050a06bb88eb6d56498144527ab60e04 1086 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 239 250 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_4195 050a06bb88eb6d56498144527ab60e04 1086 Pfam PF00082 Subtilase family 234 484 3.0E-56 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_4195 050a06bb88eb6d56498144527ab60e04 1086 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 435 445 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_4195 050a06bb88eb6d56498144527ab60e04 1086 SUPERFAMILY SSF52743 219 495 3.27E-78 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_4195 050a06bb88eb6d56498144527ab60e04 1086 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 275 285 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Amir_4195 050a06bb88eb6d56498144527ab60e04 1086 Gene3D G3DSA:3.40.50.200 208 494 1.6E-88 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_4195 050a06bb88eb6d56498144527ab60e04 1086 PRINTS PR00723 Subtilisin serine protease family (S8) signature 434 450 3.9E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_4195 050a06bb88eb6d56498144527ab60e04 1086 PRINTS PR00723 Subtilisin serine protease family (S8) signature 271 284 3.9E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_4195 050a06bb88eb6d56498144527ab60e04 1086 PRINTS PR00723 Subtilisin serine protease family (S8) signature 234 253 3.9E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_2519 9521f36e896f838379abf4d23bc237de 283 SUPERFAMILY SSF54506 3 276 2.09E-54 T 14-10-2018 Amir_2519 9521f36e896f838379abf4d23bc237de 283 Gene3D G3DSA:3.10.310.10 118 273 6.5E-68 T 14-10-2018 Amir_2519 9521f36e896f838379abf4d23bc237de 283 Gene3D G3DSA:3.10.310.10 6 275 6.5E-68 T 14-10-2018 Amir_2519 9521f36e896f838379abf4d23bc237de 283 PIRSF PIRSF016184 1 280 6.2E-59 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Amir_2519 9521f36e896f838379abf4d23bc237de 283 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 276 3.0E-49 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Amir_2519 9521f36e896f838379abf4d23bc237de 283 Pfam PF02567 Phenazine biosynthesis-like protein 7 276 2.1E-60 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Amir_0471 8b48040209862c0b1d406a315d075663 341 Pfam PF06463 Molybdenum Cofactor Synthesis C 197 323 1.1E-35 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0471 8b48040209862c0b1d406a315d075663 341 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 31 42 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0471 8b48040209862c0b1d406a315d075663 341 Pfam PF13353 4Fe-4S single cluster domain 32 119 1.1E-5 T 14-10-2018 Amir_0471 8b48040209862c0b1d406a315d075663 341 Gene3D G3DSA:3.20.20.70 13 341 2.3E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_0471 8b48040209862c0b1d406a315d075663 341 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 16 341 7.9E-109 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0471 8b48040209862c0b1d406a315d075663 341 Pfam PF04055 Radical SAM superfamily 30 191 3.1E-30 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_0471 8b48040209862c0b1d406a315d075663 341 SMART SM00729 25 221 1.8E-6 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amir_0471 8b48040209862c0b1d406a315d075663 341 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 16 341 40.223 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amir_0471 8b48040209862c0b1d406a315d075663 341 SUPERFAMILY SSF102114 16 289 1.2E-70 T 14-10-2018 Amir_6815 aed3509f710179c937dc6fd88788d9eb 220 SUPERFAMILY SSF109755 2 213 3.66E-55 T 14-10-2018 Amir_6815 aed3509f710179c937dc6fd88788d9eb 220 PIRSF PIRSF003107 1 215 1.5E-53 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Amir_6815 aed3509f710179c937dc6fd88788d9eb 220 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 4 211 3.0E-53 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Amir_6815 aed3509f710179c937dc6fd88788d9eb 220 Gene3D G3DSA:1.20.58.220 1 213 7.0E-59 T 14-10-2018 IPR038078 PhoU-like domain superfamily Amir_6815 aed3509f710179c937dc6fd88788d9eb 220 Pfam PF01895 PhoU domain 122 204 1.2E-10 T 14-10-2018 IPR026022 PhoU domain Amir_6815 aed3509f710179c937dc6fd88788d9eb 220 Pfam PF01895 PhoU domain 16 103 6.5E-16 T 14-10-2018 IPR026022 PhoU domain Amir_3825 230a72c836afeae6c555fa765cbbd804 121 Gene3D G3DSA:3.30.429.10 1 120 5.2E-35 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily Amir_3825 230a72c836afeae6c555fa765cbbd804 121 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 3 110 9.7E-10 T 14-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 Amir_3825 230a72c836afeae6c555fa765cbbd804 121 SUPERFAMILY SSF55331 2 117 8.55E-24 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily Amir_5334 427ffab01cb6cbc428227304cc635742 262 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 31 168 1.7E-16 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal Amir_5334 427ffab01cb6cbc428227304cc635742 262 SMART SM00495 216 262 4.7E-6 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Amir_5334 427ffab01cb6cbc428227304cc635742 262 SUPERFAMILY SSF51055 218 261 1.96E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Amir_5334 427ffab01cb6cbc428227304cc635742 262 Gene3D G3DSA:2.10.10.20 219 261 1.6E-19 T 14-10-2018 Amir_5334 427ffab01cb6cbc428227304cc635742 262 SUPERFAMILY SSF81296 31 171 8.54E-35 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_5334 427ffab01cb6cbc428227304cc635742 262 Gene3D G3DSA:2.70.50.50 31 171 1.2E-47 T 14-10-2018 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 PRINTS PR00385 P450 superfamily signature 269 280 1.1E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 PRINTS PR00385 P450 superfamily signature 234 251 1.1E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 PRINTS PR00385 P450 superfamily signature 346 357 1.1E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 PRINTS PR00385 P450 superfamily signature 337 346 1.1E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 Gene3D G3DSA:1.10.630.10 2 394 6.6E-132 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 Pfam PF00067 Cytochrome P450 44 367 4.6E-27 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 SUPERFAMILY SSF48264 12 394 1.7E-100 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 PRINTS PR00359 B-class P450 signature 133 149 2.9E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 PRINTS PR00359 B-class P450 signature 150 165 2.9E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 PRINTS PR00359 B-class P450 signature 346 357 2.9E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 PRINTS PR00359 B-class P450 signature 288 315 2.9E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 PRINTS PR00359 B-class P450 signature 269 280 2.9E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 PRINTS PR00359 B-class P450 signature 86 97 2.9E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 PRINTS PR00359 B-class P450 signature 188 210 2.9E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 PRINTS PR00359 B-class P450 signature 337 346 2.9E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 PRINTS PR00359 B-class P450 signature 316 331 2.9E-61 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1195 5ffc126f00520dd557e160af676b1b98 394 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 339 348 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_4891 2d360efdfbc4233a3c6560bc8ad4dec3 447 SUPERFAMILY SSF51338 30 401 2.28E-11 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_4891 2d360efdfbc4233a3c6560bc8ad4dec3 447 Pfam PF01979 Amidohydrolase family 117 396 1.3E-12 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_4891 2d360efdfbc4233a3c6560bc8ad4dec3 447 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 34 398 2.0E-96 T 14-10-2018 Amir_4891 2d360efdfbc4233a3c6560bc8ad4dec3 447 SUPERFAMILY SSF51556 44 341 8.66E-77 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_4891 2d360efdfbc4233a3c6560bc8ad4dec3 447 ProSitePatterns PS00483 Dihydroorotase signature 2. 281 292 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_4891 2d360efdfbc4233a3c6560bc8ad4dec3 447 Gene3D G3DSA:2.30.40.10 32 396 2.5E-102 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_4891 2d360efdfbc4233a3c6560bc8ad4dec3 447 Gene3D G3DSA:3.20.20.140 44 343 2.5E-102 T 14-10-2018 Amir_2385 1a5effba3c26dc3a8a4fd36079113dd9 176 Pfam PF16859 Bacterial transcriptional repressor C-terminal 69 168 4.4E-8 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Amir_2385 1a5effba3c26dc3a8a4fd36079113dd9 176 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 6 19 3.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2385 1a5effba3c26dc3a8a4fd36079113dd9 176 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 50 3.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2385 1a5effba3c26dc3a8a4fd36079113dd9 176 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 51 8.5E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2385 1a5effba3c26dc3a8a4fd36079113dd9 176 Gene3D G3DSA:1.10.10.60 1 44 1.7E-18 T 14-10-2018 Amir_2385 1a5effba3c26dc3a8a4fd36079113dd9 176 SUPERFAMILY SSF48498 68 175 7.26E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_2385 1a5effba3c26dc3a8a4fd36079113dd9 176 Gene3D G3DSA:1.10.357.10 45 176 1.1E-13 T 14-10-2018 Amir_2385 1a5effba3c26dc3a8a4fd36079113dd9 176 SUPERFAMILY SSF46689 3 56 2.17E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5866 af5e64a75435ea9c3c38906a737db11f 249 SUPERFAMILY SSF50494 13 247 1.85E-60 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_5866 af5e64a75435ea9c3c38906a737db11f 249 Gene3D G3DSA:2.40.10.10 32 243 2.2E-60 T 14-10-2018 Amir_5866 af5e64a75435ea9c3c38906a737db11f 249 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 66 71 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 Amir_5866 af5e64a75435ea9c3c38906a737db11f 249 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 204 215 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site Amir_5866 af5e64a75435ea9c3c38906a737db11f 249 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 120 134 8.5E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_5866 af5e64a75435ea9c3c38906a737db11f 249 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 203 215 8.5E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_5866 af5e64a75435ea9c3c38906a737db11f 249 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 56 71 8.5E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_5866 af5e64a75435ea9c3c38906a737db11f 249 SMART SM00020 30 249 1.6E-62 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_5866 af5e64a75435ea9c3c38906a737db11f 249 Gene3D G3DSA:2.40.10.10 41 245 2.2E-60 T 14-10-2018 Amir_5866 af5e64a75435ea9c3c38906a737db11f 249 Pfam PF00089 Trypsin 37 247 3.2E-48 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_6246 dab4c47cba176353c16cdaf4c9728388 455 Pfam PF03313 Serine dehydratase alpha chain 186 449 2.0E-105 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Amir_6246 dab4c47cba176353c16cdaf4c9728388 455 SUPERFAMILY SSF143548 17 156 3.4E-42 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Amir_6246 dab4c47cba176353c16cdaf4c9728388 455 Pfam PF03315 Serine dehydratase beta chain 4 155 2.8E-57 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Amir_6246 dab4c47cba176353c16cdaf4c9728388 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 452 2.8E-210 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Amir_6246 dab4c47cba176353c16cdaf4c9728388 455 Gene3D G3DSA:3.30.1330.90 11 158 1.9E-51 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Amir_5055 eb2371623748e36fb4298e92a27b82e6 333 Pfam PF01032 FecCD transport family 18 327 2.6E-88 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_5055 eb2371623748e36fb4298e92a27b82e6 333 Gene3D G3DSA:1.10.3470.10 5 332 5.2E-91 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_5055 eb2371623748e36fb4298e92a27b82e6 333 SUPERFAMILY SSF81345 6 327 1.96E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_1234 2f43c9bfc97b32faf351a4945ac3fee5 352 Gene3D G3DSA:3.40.190.10 32 140 8.3E-10 T 14-10-2018 Amir_1234 2f43c9bfc97b32faf351a4945ac3fee5 352 Pfam PF13379 NMT1-like family 34 267 3.4E-34 T 14-10-2018 Amir_1234 2f43c9bfc97b32faf351a4945ac3fee5 352 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 38 329 1.9E-55 T 14-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 Amir_1234 2f43c9bfc97b32faf351a4945ac3fee5 352 Gene3D G3DSA:3.40.190.10 141 330 7.8E-22 T 14-10-2018 Amir_1234 2f43c9bfc97b32faf351a4945ac3fee5 352 SUPERFAMILY SSF53850 37 265 4.55E-36 T 14-10-2018 Amir_7000 68d818c4da85f2317f44af6eba1368e0 308 Gene3D G3DSA:3.30.420.40 6 295 1.5E-82 T 14-10-2018 Amir_7000 68d818c4da85f2317f44af6eba1368e0 308 SUPERFAMILY SSF53067 4 302 1.45E-64 T 14-10-2018 Amir_7000 68d818c4da85f2317f44af6eba1368e0 308 Gene3D G3DSA:3.30.420.40 125 282 1.5E-82 T 14-10-2018 Amir_7000 68d818c4da85f2317f44af6eba1368e0 308 Pfam PF00480 ROK family 6 299 1.7E-61 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_7000 68d818c4da85f2317f44af6eba1368e0 308 ProSitePatterns PS01125 ROK family signature. 133 160 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_5272 b847b2ea662172fd3fe85414e38a8dc1 448 Gene3D G3DSA:1.10.8.60 174 245 5.1E-11 T 14-10-2018 Amir_5272 b847b2ea662172fd3fe85414e38a8dc1 448 Gene3D G3DSA:1.20.272.10 248 352 1.1E-46 T 14-10-2018 Amir_5272 b847b2ea662172fd3fe85414e38a8dc1 448 Gene3D G3DSA:1.10.3710.10 355 447 7.3E-22 T 14-10-2018 Amir_5272 b847b2ea662172fd3fe85414e38a8dc1 448 Pfam PF12002 MgsA AAA+ ATPase C terminal 275 440 2.0E-67 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal Amir_5272 b847b2ea662172fd3fe85414e38a8dc1 448 SUPERFAMILY SSF52540 23 232 1.32E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5272 b847b2ea662172fd3fe85414e38a8dc1 448 SUPERFAMILY SSF48019 260 443 1.98E-72 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Amir_5272 b847b2ea662172fd3fe85414e38a8dc1 448 SMART SM00382 57 174 2.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5272 b847b2ea662172fd3fe85414e38a8dc1 448 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 61 165 3.1E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amir_5272 b847b2ea662172fd3fe85414e38a8dc1 448 Gene3D G3DSA:3.40.50.300 14 172 3.4E-38 T 14-10-2018 Amir_5272 b847b2ea662172fd3fe85414e38a8dc1 448 Pfam PF16193 AAA C-terminal domain 196 274 1.1E-24 T 14-10-2018 IPR032423 AAA C-terminal domain Amir_5914 6fc684d98cfa309aa91097b5f189a5c6 325 Pfam PF00589 Phage integrase family 138 310 3.9E-40 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amir_5914 6fc684d98cfa309aa91097b5f189a5c6 325 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 27 325 51.168 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Amir_5914 6fc684d98cfa309aa91097b5f189a5c6 325 Gene3D G3DSA:1.10.150.130 25 122 1.3E-13 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Amir_5914 6fc684d98cfa309aa91097b5f189a5c6 325 Gene3D G3DSA:1.10.443.10 140 319 1.3E-54 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amir_5914 6fc684d98cfa309aa91097b5f189a5c6 325 SUPERFAMILY SSF56349 133 323 1.15E-46 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amir_5914 6fc684d98cfa309aa91097b5f189a5c6 325 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 29 113 1.5E-14 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Amir_5914 6fc684d98cfa309aa91097b5f189a5c6 325 SUPERFAMILY SSF47823 28 122 1.77E-11 T 14-10-2018 Amir_1543 142f576ffff5d9864ef12ff9d67e0c7f 703 SUPERFAMILY SSF48179 515 615 8.5E-16 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_1543 142f576ffff5d9864ef12ff9d67e0c7f 703 Pfam PF00378 Enoyl-CoA hydratase/isomerase 54 230 1.1E-22 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Amir_1543 142f576ffff5d9864ef12ff9d67e0c7f 703 Gene3D G3DSA:1.10.1040.50 519 696 6.6E-33 T 14-10-2018 Amir_1543 142f576ffff5d9864ef12ff9d67e0c7f 703 SUPERFAMILY SSF51735 331 515 2.54E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1543 142f576ffff5d9864ef12ff9d67e0c7f 703 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 334 513 1.6E-58 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amir_1543 142f576ffff5d9864ef12ff9d67e0c7f 703 Gene3D G3DSA:3.90.226.10 22 324 6.1E-54 T 14-10-2018 Amir_1543 142f576ffff5d9864ef12ff9d67e0c7f 703 SUPERFAMILY SSF48179 627 689 8.5E-12 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_1543 142f576ffff5d9864ef12ff9d67e0c7f 703 SUPERFAMILY SSF52096 31 323 5.69E-42 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_1543 142f576ffff5d9864ef12ff9d67e0c7f 703 Gene3D G3DSA:3.40.50.720 325 518 1.7E-62 T 14-10-2018 Amir_1543 142f576ffff5d9864ef12ff9d67e0c7f 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 517 598 3.4E-12 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amir_7005 7b341b4114bcf2f0ea46c568aa9f675b 124 Pfam PF01025 GrpE 55 121 2.1E-7 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Amir_7005 7b341b4114bcf2f0ea46c568aa9f675b 124 Gene3D G3DSA:2.30.22.10 65 121 3.2E-8 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Amir_7005 7b341b4114bcf2f0ea46c568aa9f675b 124 SUPERFAMILY SSF51064 67 122 9.15E-8 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Amir_1782 4fe6b77dfb58a84ef24ef1455299320b 208 Gene3D G3DSA:3.40.50.10230 1 207 8.0E-82 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 Amir_1782 4fe6b77dfb58a84ef24ef1455299320b 208 Pfam PF02570 Precorrin-8X methylmutase 10 205 4.8E-72 T 14-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 Amir_1782 4fe6b77dfb58a84ef24ef1455299320b 208 SUPERFAMILY SSF63965 3 205 1.03E-72 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 Amir_6671 77c3be717ca7239e8ea5e50af7e945a3 644 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 13 637 1.5E-217 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6671 77c3be717ca7239e8ea5e50af7e945a3 644 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 75 132 2.1E-23 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6671 77c3be717ca7239e8ea5e50af7e945a3 644 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 95 115 2.5E-8 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Amir_6671 77c3be717ca7239e8ea5e50af7e945a3 644 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 69 93 2.5E-8 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Amir_6671 77c3be717ca7239e8ea5e50af7e945a3 644 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 429 451 2.5E-8 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Amir_6671 77c3be717ca7239e8ea5e50af7e945a3 644 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 273 295 2.5E-8 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Amir_6671 77c3be717ca7239e8ea5e50af7e945a3 644 Pfam PF00361 Proton-conducting membrane transporter 147 429 2.0E-84 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6671 77c3be717ca7239e8ea5e50af7e945a3 644 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 233 254 2.5E-59 T 14-10-2018 Amir_6671 77c3be717ca7239e8ea5e50af7e945a3 644 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 255 281 2.5E-59 T 14-10-2018 Amir_6671 77c3be717ca7239e8ea5e50af7e945a3 644 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 121 141 2.5E-59 T 14-10-2018 Amir_6671 77c3be717ca7239e8ea5e50af7e945a3 644 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 430 449 2.5E-59 T 14-10-2018 Amir_6671 77c3be717ca7239e8ea5e50af7e945a3 644 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 168 189 2.5E-59 T 14-10-2018 Amir_6671 77c3be717ca7239e8ea5e50af7e945a3 644 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 323 335 2.5E-59 T 14-10-2018 Amir_6671 77c3be717ca7239e8ea5e50af7e945a3 644 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 93 118 2.5E-59 T 14-10-2018 Amir_5763 28b87ef01e81d6ed24e17afc2de53c3c 356 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 1 354 30.392 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_5763 28b87ef01e81d6ed24e17afc2de53c3c 356 Gene3D G3DSA:3.40.50.2000 2 342 3.0E-93 T 14-10-2018 Amir_5763 28b87ef01e81d6ed24e17afc2de53c3c 356 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 340 2.7E-35 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Amir_5763 28b87ef01e81d6ed24e17afc2de53c3c 356 SUPERFAMILY SSF53756 1 354 4.83E-95 T 14-10-2018 Amir_5763 28b87ef01e81d6ed24e17afc2de53c3c 356 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 1 139 2.0E-36 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_5763 28b87ef01e81d6ed24e17afc2de53c3c 356 Gene3D G3DSA:3.40.50.2000 157 338 3.0E-93 T 14-10-2018 Amir_5763 28b87ef01e81d6ed24e17afc2de53c3c 356 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 2.3E-82 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_6207 53b1cb0b871f9c95f2a710c456ce5b89 725 Gene3D G3DSA:1.10.10.2220 186 280 2.5E-21 T 14-10-2018 Amir_6207 53b1cb0b871f9c95f2a710c456ce5b89 725 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 11 720 1.8E-201 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 Amir_6207 53b1cb0b871f9c95f2a710c456ce5b89 725 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 4 724 28.657 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 Amir_6207 53b1cb0b871f9c95f2a710c456ce5b89 725 Gene3D G3DSA:2.30.30.940 571 648 2.1E-142 T 14-10-2018 Amir_6207 53b1cb0b871f9c95f2a710c456ce5b89 725 Gene3D G3DSA:3.40.50.300 483 711 2.1E-142 T 14-10-2018 Amir_6207 53b1cb0b871f9c95f2a710c456ce5b89 725 Pfam PF13538 UvrD-like helicase C-terminal domain 647 695 1.4E-20 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain Amir_6207 53b1cb0b871f9c95f2a710c456ce5b89 725 SUPERFAMILY SSF52540 434 708 3.63E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6207 53b1cb0b871f9c95f2a710c456ce5b89 725 SUPERFAMILY SSF47781 85 161 7.91E-10 T 14-10-2018 IPR010994 RuvA domain 2-like Amir_6207 53b1cb0b871f9c95f2a710c456ce5b89 725 SUPERFAMILY SSF52540 183 477 2.94E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6207 53b1cb0b871f9c95f2a710c456ce5b89 725 Pfam PF14490 Helix-hairpin-helix containing domain 143 233 1.1E-29 T 14-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain Amir_6207 53b1cb0b871f9c95f2a710c456ce5b89 725 Gene3D G3DSA:1.10.150.20 78 146 1.4E-9 T 14-10-2018 Amir_6207 53b1cb0b871f9c95f2a710c456ce5b89 725 Pfam PF13604 AAA domain 325 507 4.2E-44 T 14-10-2018 Amir_6207 53b1cb0b871f9c95f2a710c456ce5b89 725 SMART SM00382 338 535 0.0018 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6207 53b1cb0b871f9c95f2a710c456ce5b89 725 Gene3D G3DSA:3.40.50.300 322 717 2.1E-142 T 14-10-2018 Amir_6207 53b1cb0b871f9c95f2a710c456ce5b89 725 Pfam PF14520 Helix-hairpin-helix domain 93 142 3.0E-5 T 14-10-2018 Amir_0146 e67f52a07f151beecf3bd1a56a072156 355 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 354 50.319 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Amir_0146 e67f52a07f151beecf3bd1a56a072156 355 Gene3D G3DSA:3.40.640.10 36 266 1.8E-126 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_0146 e67f52a07f151beecf3bd1a56a072156 355 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 351 3.4E-86 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Amir_0146 e67f52a07f151beecf3bd1a56a072156 355 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 218 227 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Amir_0146 e67f52a07f151beecf3bd1a56a072156 355 SUPERFAMILY SSF53383 18 347 1.38E-77 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_0146 e67f52a07f151beecf3bd1a56a072156 355 Pfam PF00155 Aminotransferase class I and II 25 346 9.9E-49 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_0146 e67f52a07f151beecf3bd1a56a072156 355 Gene3D G3DSA:3.90.1150.10 12 347 1.8E-126 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_0146 e67f52a07f151beecf3bd1a56a072156 355 Hamap MF_01513 Putative phenylalanine aminotransferase [pat]. 5 355 47.403 T 14-10-2018 IPR024892 Putative phenylalanine aminotransferase Amir_4610 b8b47a6f047c52ef3b4cdfa50be2e1f2 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 304 1.5E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_4610 b8b47a6f047c52ef3b4cdfa50be2e1f2 311 Gene3D G3DSA:1.10.3720.10 71 310 8.5E-57 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4610 b8b47a6f047c52ef3b4cdfa50be2e1f2 311 SUPERFAMILY SSF161098 75 298 6.8E-50 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0844 f3e3a64665e6b76708344e27cb9dddbc 228 SUPERFAMILY SSF46894 124 224 5.1E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_0844 f3e3a64665e6b76708344e27cb9dddbc 228 Gene3D G3DSA:3.40.50.2300 3 128 9.8E-31 T 14-10-2018 Amir_0844 f3e3a64665e6b76708344e27cb9dddbc 228 Pfam PF00072 Response regulator receiver domain 10 118 5.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0844 f3e3a64665e6b76708344e27cb9dddbc 228 SUPERFAMILY SSF52172 7 132 3.7E-33 T 14-10-2018 IPR011006 CheY-like superfamily Amir_0844 f3e3a64665e6b76708344e27cb9dddbc 228 Gene3D G3DSA:1.10.10.10 129 228 4.0E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0844 f3e3a64665e6b76708344e27cb9dddbc 228 SMART SM00862 150 223 1.7E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_0844 f3e3a64665e6b76708344e27cb9dddbc 228 SMART SM00448 8 118 4.2E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0844 f3e3a64665e6b76708344e27cb9dddbc 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 223 2.3E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4724 a4690407b20d73824b8c2236d37be20e 467 Gene3D G3DSA:3.50.50.60 128 278 1.5E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4724 a4690407b20d73824b8c2236d37be20e 467 Gene3D G3DSA:3.50.50.60 3 331 1.5E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4724 a4690407b20d73824b8c2236d37be20e 467 Pfam PF04324 BFD-like [2Fe-2S] binding domain 380 431 1.2E-8 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Amir_4724 a4690407b20d73824b8c2236d37be20e 467 PIRSF PIRSF037495 1 465 2.0E-125 T 14-10-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 Amir_4724 a4690407b20d73824b8c2236d37be20e 467 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 323 3.6E-28 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_4724 a4690407b20d73824b8c2236d37be20e 467 SUPERFAMILY SSF51905 3 342 1.4E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4724 a4690407b20d73824b8c2236d37be20e 467 Gene3D G3DSA:1.10.10.1100 371 435 6.0E-16 T 14-10-2018 Amir_4724 a4690407b20d73824b8c2236d37be20e 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 119 128 2.1E-13 T 14-10-2018 Amir_4724 a4690407b20d73824b8c2236d37be20e 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.1E-13 T 14-10-2018 Amir_4724 a4690407b20d73824b8c2236d37be20e 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 185 2.1E-13 T 14-10-2018 Amir_4724 a4690407b20d73824b8c2236d37be20e 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.6E-22 T 14-10-2018 Amir_4724 a4690407b20d73824b8c2236d37be20e 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 5.6E-22 T 14-10-2018 Amir_4724 a4690407b20d73824b8c2236d37be20e 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 116 134 5.6E-22 T 14-10-2018 Amir_4724 a4690407b20d73824b8c2236d37be20e 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 5.6E-22 T 14-10-2018 Amir_4724 a4690407b20d73824b8c2236d37be20e 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 319 5.6E-22 T 14-10-2018 Amir_5189 83f77bf55cd078e8c836b270df06be23 513 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 204 210 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amir_5189 83f77bf55cd078e8c836b270df06be23 513 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 28 214 6.6E-62 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amir_5189 83f77bf55cd078e8c836b270df06be23 513 SUPERFAMILY SSF55347 204 511 1.41E-110 T 14-10-2018 Amir_5189 83f77bf55cd078e8c836b270df06be23 513 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 264 280 4.4E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amir_5189 83f77bf55cd078e8c836b270df06be23 513 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 246 263 4.4E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amir_5189 83f77bf55cd078e8c836b270df06be23 513 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 353 379 4.4E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amir_5189 83f77bf55cd078e8c836b270df06be23 513 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 170 183 4.4E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amir_5189 83f77bf55cd078e8c836b270df06be23 513 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 194 222 4.4E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amir_5189 83f77bf55cd078e8c836b270df06be23 513 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 24 512 87.025 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amir_5189 83f77bf55cd078e8c836b270df06be23 513 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 26 512 1.1E-199 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amir_5189 83f77bf55cd078e8c836b270df06be23 513 PIRSF PIRSF000110 5 513 3.5E-176 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amir_5189 83f77bf55cd078e8c836b270df06be23 513 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 216 511 1.1E-109 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amir_5189 83f77bf55cd078e8c836b270df06be23 513 Gene3D G3DSA:3.40.50.720 23 202 8.1E-55 T 14-10-2018 Amir_5189 83f77bf55cd078e8c836b270df06be23 513 SUPERFAMILY SSF51735 14 217 3.54E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5189 83f77bf55cd078e8c836b270df06be23 513 Gene3D G3DSA:3.30.360.10 203 512 1.8E-118 T 14-10-2018 Amir_4925 394de94ac5f52911117e30464b0aefc1 295 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 41 276 1.1E-29 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_4925 394de94ac5f52911117e30464b0aefc1 295 SUPERFAMILY SSF52266 36 287 9.49E-62 T 14-10-2018 Amir_4925 394de94ac5f52911117e30464b0aefc1 295 Gene3D G3DSA:3.40.50.1110 32 289 4.9E-70 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_6745 edbd4b9f0fc8efbdd54db51c910064a7 286 Gene3D G3DSA:3.20.20.530 17 258 5.8E-48 T 14-10-2018 Amir_6745 edbd4b9f0fc8efbdd54db51c910064a7 286 SUPERFAMILY SSF51730 18 279 2.98E-29 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like Amir_6396 3b730e366b490196b8dd232b2782320a 588 Gene3D G3DSA:3.30.470.130 1 452 7.1E-174 T 14-10-2018 Amir_6396 3b730e366b490196b8dd232b2782320a 588 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 7.6E-43 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_6396 3b730e366b490196b8dd232b2782320a 588 SUPERFAMILY SSF51246 330 450 8.37E-36 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Amir_6396 3b730e366b490196b8dd232b2782320a 588 SMART SM00878 336 446 3.1E-53 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_6396 3b730e366b490196b8dd232b2782320a 588 Pfam PF02785 Biotin carboxylase C-terminal domain 336 446 5.3E-34 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_6396 3b730e366b490196b8dd232b2782320a 588 SUPERFAMILY SSF51230 517 586 2.49E-20 T 14-10-2018 IPR011053 Single hybrid motif Amir_6396 3b730e366b490196b8dd232b2782320a 588 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_6396 3b730e366b490196b8dd232b2782320a 588 SUPERFAMILY SSF52440 2 114 1.01E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amir_6396 3b730e366b490196b8dd232b2782320a 588 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 543 560 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_6396 3b730e366b490196b8dd232b2782320a 588 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 6.5E-76 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_6396 3b730e366b490196b8dd232b2782320a 588 Pfam PF00364 Biotin-requiring enzyme 521 586 2.2E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Amir_6396 3b730e366b490196b8dd232b2782320a 588 SUPERFAMILY SSF56059 116 324 1.71E-59 T 14-10-2018 Amir_6396 3b730e366b490196b8dd232b2782320a 588 Gene3D G3DSA:2.40.50.100 520 587 1.8E-22 T 14-10-2018 Amir_5694 55b28f3901d5db32252d86671cfe4058 456 Pfam PF00375 Sodium:dicarboxylate symporter family 16 411 1.4E-94 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Amir_5694 55b28f3901d5db32252d86671cfe4058 456 SUPERFAMILY SSF118215 16 411 3.66E-101 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Amir_5694 55b28f3901d5db32252d86671cfe4058 456 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 302 325 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site Amir_5694 55b28f3901d5db32252d86671cfe4058 456 PRINTS PR00173 Glutamate-aspartate symporter signature 14 34 6.4E-24 T 14-10-2018 Amir_5694 55b28f3901d5db32252d86671cfe4058 456 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 6.4E-24 T 14-10-2018 Amir_5694 55b28f3901d5db32252d86671cfe4058 456 PRINTS PR00173 Glutamate-aspartate symporter signature 199 218 6.4E-24 T 14-10-2018 Amir_5694 55b28f3901d5db32252d86671cfe4058 456 PRINTS PR00173 Glutamate-aspartate symporter signature 334 353 6.4E-24 T 14-10-2018 Amir_5694 55b28f3901d5db32252d86671cfe4058 456 PRINTS PR00173 Glutamate-aspartate symporter signature 299 325 6.4E-24 T 14-10-2018 Amir_5694 55b28f3901d5db32252d86671cfe4058 456 Gene3D G3DSA:1.10.3860.10 5 427 4.4E-107 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Amir_2571 edcbd30a13c73a09a5868e8b7929547a 266 SUPERFAMILY SSF51126 50 226 1.38E-58 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_2571 edcbd30a13c73a09a5868e8b7929547a 266 Gene3D G3DSA:2.160.20.10 51 266 2.9E-78 T 14-10-2018 IPR012334 Pectin lyase fold Amir_2571 edcbd30a13c73a09a5868e8b7929547a 266 Pfam PF03211 Pectate lyase 39 241 2.0E-85 T 14-10-2018 IPR004898 Pectate lyase PlyH/PlyE-like GO:0005576|GO:0030570 KEGG: 00040+4.2.2.2 Amir_2089 973e1810c69e570b514181fd095c5f25 682 Gene3D G3DSA:3.30.54.20 136 208 2.2E-57 T 14-10-2018 Amir_2089 973e1810c69e570b514181fd095c5f25 682 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 78 664 1.6E-194 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Amir_2089 973e1810c69e570b514181fd095c5f25 682 SUPERFAMILY SSF55186 70 261 1.83E-49 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Amir_2089 973e1810c69e570b514181fd095c5f25 682 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 72 670 33.092 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Amir_2089 973e1810c69e570b514181fd095c5f25 682 SUPERFAMILY SSF55681 264 561 5.36E-92 T 14-10-2018 Amir_2089 973e1810c69e570b514181fd095c5f25 682 SUPERFAMILY SSF52954 565 671 2.57E-29 T 14-10-2018 Amir_2089 973e1810c69e570b514181fd095c5f25 682 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 195 240 3.0E-13 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Amir_2089 973e1810c69e570b514181fd095c5f25 682 Pfam PF03129 Anticodon binding domain 577 664 2.4E-17 T 14-10-2018 IPR004154 Anticodon-binding Amir_2089 973e1810c69e570b514181fd095c5f25 682 Gene3D G3DSA:3.30.930.10 246 568 1.1E-113 T 14-10-2018 Amir_2089 973e1810c69e570b514181fd095c5f25 682 Gene3D G3DSA:3.40.50.800 569 675 3.1E-24 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Amir_2089 973e1810c69e570b514181fd095c5f25 682 Gene3D G3DSA:3.30.980.10 75 243 2.2E-57 T 14-10-2018 Amir_2089 973e1810c69e570b514181fd095c5f25 682 SMART SM00863 184 240 7.5E-21 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Amir_2089 973e1810c69e570b514181fd095c5f25 682 PRINTS PR01047 Threonyl-tRNA synthetase signature 570 582 1.8E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Amir_2089 973e1810c69e570b514181fd095c5f25 682 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 392 1.8E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Amir_2089 973e1810c69e570b514181fd095c5f25 682 PRINTS PR01047 Threonyl-tRNA synthetase signature 397 420 1.8E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Amir_2089 973e1810c69e570b514181fd095c5f25 682 PRINTS PR01047 Threonyl-tRNA synthetase signature 543 556 1.8E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Amir_2089 973e1810c69e570b514181fd095c5f25 682 PRINTS PR01047 Threonyl-tRNA synthetase signature 500 528 1.8E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Amir_2089 973e1810c69e570b514181fd095c5f25 682 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 357 565 1.8E-35 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_6695 b25ba7d5652f16a8cd43ca7c6022d785 348 Gene3D G3DSA:1.10.4080.10 2 334 2.0E-66 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Amir_6695 b25ba7d5652f16a8cd43ca7c6022d785 348 Pfam PF03747 ADP-ribosylglycohydrolase 6 313 2.1E-65 T 14-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 Amir_6695 b25ba7d5652f16a8cd43ca7c6022d785 348 SUPERFAMILY SSF101478 4 327 1.57E-53 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Amir_2833 a804d61cfdc4984d9c584b4675551be3 315 SUPERFAMILY SSF161098 76 303 1.57E-52 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2833 a804d61cfdc4984d9c584b4675551be3 315 Gene3D G3DSA:1.10.3720.10 73 314 1.6E-57 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2833 a804d61cfdc4984d9c584b4675551be3 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 302 2.0E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_4979 a2088261dfcddbfa5da2f9485a9527e0 440 Pfam PF00571 CBS domain 280 326 1.7E-6 T 14-10-2018 IPR000644 CBS domain Amir_4979 a2088261dfcddbfa5da2f9485a9527e0 440 Pfam PF00571 CBS domain 216 266 5.8E-5 T 14-10-2018 IPR000644 CBS domain Amir_4979 a2088261dfcddbfa5da2f9485a9527e0 440 SUPERFAMILY SSF56176 340 429 1.09E-13 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amir_4979 a2088261dfcddbfa5da2f9485a9527e0 440 Gene3D G3DSA:3.10.580.10 191 332 1.9E-40 T 14-10-2018 Amir_4979 a2088261dfcddbfa5da2f9485a9527e0 440 Pfam PF03471 Transporter associated domain 342 420 9.4E-14 T 14-10-2018 IPR005170 Transporter-associated domain Amir_4979 a2088261dfcddbfa5da2f9485a9527e0 440 Gene3D G3DSA:3.30.465.10 333 421 3.7E-17 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amir_4979 a2088261dfcddbfa5da2f9485a9527e0 440 SMART SM01091 341 422 3.7E-15 T 14-10-2018 IPR005170 Transporter-associated domain Amir_4979 a2088261dfcddbfa5da2f9485a9527e0 440 SUPERFAMILY SSF54631 210 343 8.05E-24 T 14-10-2018 Amir_4979 a2088261dfcddbfa5da2f9485a9527e0 440 Pfam PF01595 Domain of unknown function DUF21 10 188 6.4E-45 T 14-10-2018 IPR002550 CNNM, transmembrane domain Amir_4760 bcb36ac06196a08b150db99c3cf0f5c4 175 ProSitePatterns PS00018 EF-hand calcium-binding domain. 64 76 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site Amir_4760 bcb36ac06196a08b150db99c3cf0f5c4 175 ProSitePatterns PS00018 EF-hand calcium-binding domain. 14 26 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site Amir_4760 bcb36ac06196a08b150db99c3cf0f5c4 175 SUPERFAMILY SSF47473 5 163 4.48E-20 T 14-10-2018 IPR011992 EF-hand domain pair Amir_4760 bcb36ac06196a08b150db99c3cf0f5c4 175 Pfam PF13499 EF-hand domain pair 9 77 3.9E-7 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Amir_4760 bcb36ac06196a08b150db99c3cf0f5c4 175 SMART SM00054 5 33 17.0 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Amir_4760 bcb36ac06196a08b150db99c3cf0f5c4 175 SMART SM00054 55 83 2.8 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Amir_4760 bcb36ac06196a08b150db99c3cf0f5c4 175 SMART SM00054 93 121 27.0 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Amir_4760 bcb36ac06196a08b150db99c3cf0f5c4 175 Gene3D G3DSA:1.10.238.10 4 158 2.2E-24 T 14-10-2018 Amir_3726 a4aebe7f356ac8449187886f7dbebf90 491 SUPERFAMILY SSF53720 79 357 4.97E-7 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_3726 a4aebe7f356ac8449187886f7dbebf90 491 PIRSF PIRSF009414 62 490 8.0E-55 T 14-10-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 Amir_3726 a4aebe7f356ac8449187886f7dbebf90 491 Gene3D G3DSA:3.40.605.10 57 289 3.4E-5 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_3726 a4aebe7f356ac8449187886f7dbebf90 491 Pfam PF05893 Acyl-CoA reductase (LuxC) 76 481 3.9E-72 T 14-10-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 Amir_2334 29d125f9453dbe5bce519b123a812ffb 320 PIRSF PIRSF002888 8 320 4.2E-74 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amir_2334 29d125f9453dbe5bce519b123a812ffb 320 Gene3D G3DSA:2.30.330.10 229 318 4.2E-10 T 14-10-2018 IPR036429 SpoA-like superfamily Amir_2334 29d125f9453dbe5bce519b123a812ffb 320 Gene3D G3DSA:3.40.1550.10 36 218 4.8E-43 T 14-10-2018 IPR028976 CheC-like superfamily Amir_2334 29d125f9453dbe5bce519b123a812ffb 320 Pfam PF02154 Flagellar motor switch protein FliM 30 214 2.7E-40 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amir_2334 29d125f9453dbe5bce519b123a812ffb 320 PRINTS PR00955 Flagellar motor switch protein FliM signature 81 97 7.3E-7 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amir_2334 29d125f9453dbe5bce519b123a812ffb 320 PRINTS PR00955 Flagellar motor switch protein FliM signature 201 219 7.3E-7 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amir_2334 29d125f9453dbe5bce519b123a812ffb 320 PRINTS PR00955 Flagellar motor switch protein FliM signature 106 125 7.3E-7 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amir_2334 29d125f9453dbe5bce519b123a812ffb 320 SUPERFAMILY SSF103039 38 210 2.62E-12 T 14-10-2018 IPR028976 CheC-like superfamily Amir_2334 29d125f9453dbe5bce519b123a812ffb 320 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 244 308 1.0E-12 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) Amir_2334 29d125f9453dbe5bce519b123a812ffb 320 SUPERFAMILY SSF101801 241 315 1.01E-11 T 14-10-2018 IPR036429 SpoA-like superfamily Amir_3856 197ef76796da713f956c02c8d89b4601 385 Pfam PF07690 Major Facilitator Superfamily 228 377 7.2E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_3856 197ef76796da713f956c02c8d89b4601 385 Pfam PF07690 Major Facilitator Superfamily 18 213 1.6E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_3856 197ef76796da713f956c02c8d89b4601 385 Gene3D G3DSA:1.20.1250.20 5 380 2.6E-44 T 14-10-2018 Amir_3856 197ef76796da713f956c02c8d89b4601 385 SUPERFAMILY SSF103473 9 379 1.28E-43 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_3856 197ef76796da713f956c02c8d89b4601 385 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 4.0E-8 T 14-10-2018 Amir_3856 197ef76796da713f956c02c8d89b4601 385 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 4.0E-8 T 14-10-2018 Amir_5148 d5eb418d70d81e46abd843c9d1c6d544 131 Pfam PF01883 Iron-sulfur cluster assembly protein 29 93 2.4E-19 T 14-10-2018 IPR002744 MIP18 family-like Amir_5148 d5eb418d70d81e46abd843c9d1c6d544 131 SUPERFAMILY SSF117916 29 125 1.31E-26 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Amir_5148 d5eb418d70d81e46abd843c9d1c6d544 131 Gene3D G3DSA:3.30.300.130 26 126 2.3E-30 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Amir_2360 ad9bf01ddee0d94c0ef66ba3520fab4d 86 Pfam PF02599 Global regulator protein family 1 50 9.7E-24 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Amir_2360 ad9bf01ddee0d94c0ef66ba3520fab4d 86 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 72 17.401 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Amir_2360 ad9bf01ddee0d94c0ef66ba3520fab4d 86 Gene3D G3DSA:3.30.70.1680 1 61 2.0E-24 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Amir_2360 ad9bf01ddee0d94c0ef66ba3520fab4d 86 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 61 7.6E-24 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Amir_2360 ad9bf01ddee0d94c0ef66ba3520fab4d 86 SUPERFAMILY SSF117130 1 51 3.27E-18 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Amir_2360 ad9bf01ddee0d94c0ef66ba3520fab4d 86 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 8.0E-14 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Amir_5503 c846e20be19aeff2a3d2401d1f0307a4 124 Gene3D G3DSA:3.10.50.40 5 124 5.0E-38 T 14-10-2018 Amir_5503 c846e20be19aeff2a3d2401d1f0307a4 124 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 30 121 7.5E-29 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Amir_5503 c846e20be19aeff2a3d2401d1f0307a4 124 SUPERFAMILY SSF54534 16 123 8.05E-37 T 14-10-2018 Amir_6238 2c98b0019bbceb2ccd7367c60f6ae5c7 552 SUPERFAMILY SSF49265 139 231 5.19E-15 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 Amir_6238 2c98b0019bbceb2ccd7367c60f6ae5c7 552 Pfam PF00553 Cellulose binding domain 32 128 9.0E-28 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_6238 2c98b0019bbceb2ccd7367c60f6ae5c7 552 Gene3D G3DSA:2.60.40.290 28 132 2.5E-32 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_6238 2c98b0019bbceb2ccd7367c60f6ae5c7 552 SUPERFAMILY SSF49384 28 129 5.3E-30 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_6238 2c98b0019bbceb2ccd7367c60f6ae5c7 552 Gene3D G3DSA:3.20.20.80 266 552 2.6E-76 T 14-10-2018 Amir_6238 2c98b0019bbceb2ccd7367c60f6ae5c7 552 Gene3D G3DSA:2.60.40.10 140 226 9.2E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_6238 2c98b0019bbceb2ccd7367c60f6ae5c7 552 SMART SM00060 142 215 6.8E-11 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 Amir_6238 2c98b0019bbceb2ccd7367c60f6ae5c7 552 SMART SM00637 31 128 9.8E-36 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_6238 2c98b0019bbceb2ccd7367c60f6ae5c7 552 Pfam PF00041 Fibronectin type III domain 144 213 2.5E-7 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 Amir_6238 2c98b0019bbceb2ccd7367c60f6ae5c7 552 SUPERFAMILY SSF51445 274 525 4.88E-18 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_3309 46bceb2272c0b9252944b6f796905a21 239 Pfam PF06197 Protein of unknown function (DUF998) 17 211 1.2E-16 T 14-10-2018 IPR009339 Protein of unknown function DUF998 Amir_2386 fa3022531cd756533f5d7cac0093ddeb 183 ProDom PD016028 PROTEASE METALLOPROTEASE EXTRACELLULAR NEUTRAL SMALL METAL-BINDING ZINC HYDROLASE SNAPALYSIN ZYMOGEN 43 161 5.0E-29 T 14-10-2018 IPR000013 Peptidase M7, snapalysin GO:0004222|GO:0005576|GO:0006508|GO:0008270 Amir_2386 fa3022531cd756533f5d7cac0093ddeb 183 Pfam PF02031 Streptomyces extracellular neutral proteinase (M7) family 36 164 2.3E-24 T 14-10-2018 IPR000013 Peptidase M7, snapalysin GO:0004222|GO:0005576|GO:0006508|GO:0008270 Amir_2386 fa3022531cd756533f5d7cac0093ddeb 183 PRINTS PR00787 Streptomyces extracellular neutral proteinase (M7) family signature 126 150 3.7E-15 T 14-10-2018 IPR000013 Peptidase M7, snapalysin GO:0004222|GO:0005576|GO:0006508|GO:0008270 Amir_2386 fa3022531cd756533f5d7cac0093ddeb 183 PRINTS PR00787 Streptomyces extracellular neutral proteinase (M7) family signature 42 68 3.7E-15 T 14-10-2018 IPR000013 Peptidase M7, snapalysin GO:0004222|GO:0005576|GO:0006508|GO:0008270 Amir_2386 fa3022531cd756533f5d7cac0093ddeb 183 PRINTS PR00787 Streptomyces extracellular neutral proteinase (M7) family signature 101 125 3.7E-15 T 14-10-2018 IPR000013 Peptidase M7, snapalysin GO:0004222|GO:0005576|GO:0006508|GO:0008270 Amir_2386 fa3022531cd756533f5d7cac0093ddeb 183 PRINTS PR00787 Streptomyces extracellular neutral proteinase (M7) family signature 153 167 3.7E-15 T 14-10-2018 IPR000013 Peptidase M7, snapalysin GO:0004222|GO:0005576|GO:0006508|GO:0008270 Amir_2386 fa3022531cd756533f5d7cac0093ddeb 183 Gene3D G3DSA:3.40.390.10 35 168 1.2E-36 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Amir_2386 fa3022531cd756533f5d7cac0093ddeb 183 SUPERFAMILY SSF55486 36 163 4.81E-19 T 14-10-2018 Amir_3111 5b09c98993fee36a1c07e05d2b07a66f 296 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 152 168 4.2E-6 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_3111 5b09c98993fee36a1c07e05d2b07a66f 296 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 179 198 4.2E-6 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_3111 5b09c98993fee36a1c07e05d2b07a66f 296 Pfam PF01037 Lrp/AsnC ligand binding domain 219 288 5.1E-11 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Amir_3111 5b09c98993fee36a1c07e05d2b07a66f 296 Gene3D G3DSA:3.30.70.920 32 121 1.2E-5 T 14-10-2018 Amir_3111 5b09c98993fee36a1c07e05d2b07a66f 296 Gene3D G3DSA:3.30.70.920 204 294 6.3E-13 T 14-10-2018 Amir_3111 5b09c98993fee36a1c07e05d2b07a66f 296 Pfam PF13404 AsnC-type helix-turn-helix domain 152 193 1.7E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_3111 5b09c98993fee36a1c07e05d2b07a66f 296 SUPERFAMILY SSF54909 40 114 8.85E-5 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_3111 5b09c98993fee36a1c07e05d2b07a66f 296 SUPERFAMILY SSF54909 216 290 4.16E-10 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_3111 5b09c98993fee36a1c07e05d2b07a66f 296 SMART SM00344 152 257 1.3E-5 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Amir_3111 5b09c98993fee36a1c07e05d2b07a66f 296 SUPERFAMILY SSF46785 151 199 3.33E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3111 5b09c98993fee36a1c07e05d2b07a66f 296 Gene3D G3DSA:1.10.10.10 149 199 7.9E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4886 1c099f10861dd746e0a9dbe4fc260f51 297 SUPERFAMILY SSF52540 53 282 2.0E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4886 1c099f10861dd746e0a9dbe4fc260f51 297 Gene3D G3DSA:3.40.50.300 52 285 7.5E-63 T 14-10-2018 Amir_4886 1c099f10861dd746e0a9dbe4fc260f51 297 Pfam PF00005 ABC transporter 74 210 1.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4886 1c099f10861dd746e0a9dbe4fc260f51 297 SMART SM00382 83 261 2.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0217 75da52267d6bedf80710b1110d0663ce 421 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amir_0217 75da52267d6bedf80710b1110d0663ce 421 Gene3D G3DSA:3.30.2130.10 249 421 2.5E-64 T 14-10-2018 Amir_0217 75da52267d6bedf80710b1110d0663ce 421 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 2 407 4.8E-122 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amir_0217 75da52267d6bedf80710b1110d0663ce 421 Pfam PF13840 ACT domain 341 403 2.5E-13 T 14-10-2018 IPR027795 CASTOR, ACT domain Amir_0217 75da52267d6bedf80710b1110d0663ce 421 SUPERFAMILY SSF55021 251 331 5.07E-19 T 14-10-2018 Amir_0217 75da52267d6bedf80710b1110d0663ce 421 Pfam PF00696 Amino acid kinase family 3 231 1.2E-53 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Amir_0217 75da52267d6bedf80710b1110d0663ce 421 SUPERFAMILY SSF53633 4 244 1.96E-71 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amir_0217 75da52267d6bedf80710b1110d0663ce 421 SUPERFAMILY SSF55021 333 409 2.35E-21 T 14-10-2018 Amir_0217 75da52267d6bedf80710b1110d0663ce 421 Pfam PF01842 ACT domain 271 329 1.2E-9 T 14-10-2018 IPR002912 ACT domain Amir_0217 75da52267d6bedf80710b1110d0663ce 421 Gene3D G3DSA:3.40.1160.10 1 248 1.3E-89 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amir_0217 75da52267d6bedf80710b1110d0663ce 421 PIRSF PIRSF000726 1 61 3.9E-20 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amir_0217 75da52267d6bedf80710b1110d0663ce 421 PIRSF PIRSF000726 57 414 2.6E-127 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amir_0217 75da52267d6bedf80710b1110d0663ce 421 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 64 406 2.4E-118 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amir_4977 88dca8d47dc9e5acb0e8860e447f88c5 378 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 216 347 1.9E-5 T 14-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 Amir_4977 88dca8d47dc9e5acb0e8860e447f88c5 378 Gene3D G3DSA:3.40.50.2000 198 361 2.5E-94 T 14-10-2018 Amir_4977 88dca8d47dc9e5acb0e8860e447f88c5 378 Gene3D G3DSA:3.40.50.2000 2 370 2.5E-94 T 14-10-2018 Amir_4977 88dca8d47dc9e5acb0e8860e447f88c5 378 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 213 359 2.5E-32 T 14-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 Amir_4977 88dca8d47dc9e5acb0e8860e447f88c5 378 SUPERFAMILY SSF53756 2 375 1.48E-59 T 14-10-2018 Amir_0066 d63557b22d58b75c74d0765ac7041919 290 SUPERFAMILY SSF52096 16 232 7.04E-37 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_0066 d63557b22d58b75c74d0765ac7041919 290 Gene3D G3DSA:3.90.226.10 39 235 3.6E-54 T 14-10-2018 Amir_0066 d63557b22d58b75c74d0765ac7041919 290 Pfam PF01343 Peptidase family S49 95 236 3.9E-30 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Amir_0066 d63557b22d58b75c74d0765ac7041919 290 Gene3D G3DSA:3.40.1750.20 134 200 3.6E-54 T 14-10-2018 Amir_0066 d63557b22d58b75c74d0765ac7041919 290 PRINTS PR00127 Clp protease catalytic subunit P signature 67 87 8.9E-5 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_0066 d63557b22d58b75c74d0765ac7041919 290 PRINTS PR00127 Clp protease catalytic subunit P signature 208 227 8.9E-5 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_0066 d63557b22d58b75c74d0765ac7041919 290 PRINTS PR00127 Clp protease catalytic subunit P signature 102 119 8.9E-5 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_3011 ca1c7663011c637cb7d1438e0a7c70d0 249 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 93 2.2E-17 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Amir_3011 ca1c7663011c637cb7d1438e0a7c70d0 249 SUPERFAMILY SSF51735 5 196 2.1E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3011 ca1c7663011c637cb7d1438e0a7c70d0 249 Gene3D G3DSA:3.40.50.720 2 199 1.6E-52 T 14-10-2018 Amir_5457 d86285a6863b671fbdf427abde4d3d6b 315 SUPERFAMILY SSF50129 2 141 7.61E-30 T 14-10-2018 IPR011032 GroES-like superfamily Amir_5457 d86285a6863b671fbdf427abde4d3d6b 315 SMART SM00829 10 313 4.8E-14 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_5457 d86285a6863b671fbdf427abde4d3d6b 315 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 142 163 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Amir_5457 d86285a6863b671fbdf427abde4d3d6b 315 SUPERFAMILY SSF51735 118 288 4.86E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5457 d86285a6863b671fbdf427abde4d3d6b 315 Gene3D G3DSA:3.40.50.720 129 264 1.4E-81 T 14-10-2018 Amir_5457 d86285a6863b671fbdf427abde4d3d6b 315 Gene3D G3DSA:3.90.180.10 18 312 1.4E-81 T 14-10-2018 Amir_5457 d86285a6863b671fbdf427abde4d3d6b 315 Pfam PF13602 Zinc-binding dehydrogenase 184 313 3.7E-20 T 14-10-2018 Amir_5457 d86285a6863b671fbdf427abde4d3d6b 315 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 93 6.5E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_2304 159080896d17e78903263e00dbffb951 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 56 7.0E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2304 159080896d17e78903263e00dbffb951 195 Gene3D G3DSA:1.10.357.10 1 193 7.6E-40 T 14-10-2018 Amir_2304 159080896d17e78903263e00dbffb951 195 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_2304 159080896d17e78903263e00dbffb951 195 SUPERFAMILY SSF46689 5 57 1.32E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2304 159080896d17e78903263e00dbffb951 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.6E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2304 159080896d17e78903263e00dbffb951 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.6E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1773 40001ee9d28ef2b33d44be242b8441bc 252 SUPERFAMILY SSF52540 4 247 3.87E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1773 40001ee9d28ef2b33d44be242b8441bc 252 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_1773 40001ee9d28ef2b33d44be242b8441bc 252 Pfam PF00005 ABC transporter 19 177 8.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1773 40001ee9d28ef2b33d44be242b8441bc 252 Gene3D G3DSA:3.40.50.300 2 252 2.4E-77 T 14-10-2018 Amir_1773 40001ee9d28ef2b33d44be242b8441bc 252 SMART SM00382 28 242 1.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1773 40001ee9d28ef2b33d44be242b8441bc 252 PIRSF PIRSF039085 1 252 3.5E-115 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Amir_0659 d8a554dc1b3e821a42b1b3622a940335 388 Gene3D G3DSA:3.40.50.1820 145 385 2.6E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0659 d8a554dc1b3e821a42b1b3622a940335 388 SUPERFAMILY SSF53474 127 381 6.87E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0659 d8a554dc1b3e821a42b1b3622a940335 388 Pfam PF00326 Prolyl oligopeptidase family 182 383 4.2E-13 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Amir_3845 49440785d273847bb418d784063bdd90 307 Gene3D G3DSA:3.40.50.720 117 255 5.7E-49 T 14-10-2018 Amir_3845 49440785d273847bb418d784063bdd90 307 SMART SM00829 9 304 2.1E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_3845 49440785d273847bb418d784063bdd90 307 Pfam PF13602 Zinc-binding dehydrogenase 177 304 4.8E-9 T 14-10-2018 Amir_3845 49440785d273847bb418d784063bdd90 307 SUPERFAMILY SSF51735 111 231 2.06E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3845 49440785d273847bb418d784063bdd90 307 Gene3D G3DSA:3.90.180.10 11 303 5.7E-49 T 14-10-2018 Amir_3845 49440785d273847bb418d784063bdd90 307 SUPERFAMILY SSF50129 12 146 3.65E-19 T 14-10-2018 IPR011032 GroES-like superfamily Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 Gene3D G3DSA:1.10.288.10 921 980 4.8E-47 T 14-10-2018 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 Pfam PF02574 Homocysteine S-methyltransferase 18 308 8.1E-62 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 Gene3D G3DSA:3.10.196.10 905 1177 4.8E-47 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 SUPERFAMILY SSF51717 340 611 1.57E-77 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 Gene3D G3DSA:3.20.20.20 329 626 4.2E-98 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 Gene3D G3DSA:1.10.1240.10 630 717 2.7E-29 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 PIRSF PIRSF000381 3 1178 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 SUPERFAMILY SSF47644 636 719 8.37E-24 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 SUPERFAMILY SSF52242 720 856 8.63E-39 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 Pfam PF02607 B12 binding domain 641 713 4.0E-25 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 Gene3D G3DSA:3.20.20.330 3 319 1.4E-92 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 968 1177 2.0E-32 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 SMART SM01018 638 720 8.7E-40 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 SUPERFAMILY SSF82282 7 382 4.19E-106 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 Gene3D G3DSA:3.40.50.280 723 875 1.0E-41 T 14-10-2018 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 TIGRFAM TIGR02082 metH: methionine synthase 14 1177 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 SUPERFAMILY SSF56507 896 1178 8.11E-86 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 Pfam PF00809 Pterin binding enzyme 343 579 5.8E-45 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_2211 29d2a6a25a467bfa0019376ea492b1a1 1178 Pfam PF02310 B12 binding domain 726 837 1.7E-19 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amir_3530 9da29b890140d313c7f58912b347d3a7 267 SUPERFAMILY SSF48498 101 262 8.67E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3530 9da29b890140d313c7f58912b347d3a7 267 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 83 2.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3530 9da29b890140d313c7f58912b347d3a7 267 Gene3D G3DSA:1.10.357.10 98 267 1.3E-30 T 14-10-2018 Amir_3530 9da29b890140d313c7f58912b347d3a7 267 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 99 212 2.0E-11 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 Amir_3530 9da29b890140d313c7f58912b347d3a7 267 Gene3D G3DSA:1.10.10.60 29 93 1.4E-23 T 14-10-2018 Amir_3530 9da29b890140d313c7f58912b347d3a7 267 SUPERFAMILY SSF46689 29 94 9.23E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5491 c88b85fe9bfada7baf138bfb62f610a3 99 Gene3D G3DSA:1.10.10.10 1 99 4.5E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5491 c88b85fe9bfada7baf138bfb62f610a3 99 SMART SM00418 1 78 1.2E-25 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_5491 c88b85fe9bfada7baf138bfb62f610a3 99 SUPERFAMILY SSF46785 2 97 8.0E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5491 c88b85fe9bfada7baf138bfb62f610a3 99 Pfam PF01022 Bacterial regulatory protein, arsR family 7 52 2.7E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_5491 c88b85fe9bfada7baf138bfb62f610a3 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 4.0E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_5491 c88b85fe9bfada7baf138bfb62f610a3 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 34 49 4.0E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_5491 c88b85fe9bfada7baf138bfb62f610a3 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 2 17 4.0E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_5491 c88b85fe9bfada7baf138bfb62f610a3 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 32 4.0E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_1583 d26b2b76c7ddee6c0ce6aad005a84e1a 542 Gene3D G3DSA:3.40.50.300 6 288 1.9E-43 T 14-10-2018 Amir_1583 d26b2b76c7ddee6c0ce6aad005a84e1a 542 SUPERFAMILY SSF52540 19 237 4.82E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1583 d26b2b76c7ddee6c0ce6aad005a84e1a 542 Pfam PF00005 ABC transporter 24 194 2.0E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1583 d26b2b76c7ddee6c0ce6aad005a84e1a 542 Gene3D G3DSA:3.40.50.300 335 541 2.0E-35 T 14-10-2018 Amir_1583 d26b2b76c7ddee6c0ce6aad005a84e1a 542 SMART SM00382 32 238 1.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1583 d26b2b76c7ddee6c0ce6aad005a84e1a 542 SMART SM00382 355 531 1.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1583 d26b2b76c7ddee6c0ce6aad005a84e1a 542 Pfam PF00005 ABC transporter 350 478 6.7E-12 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1583 d26b2b76c7ddee6c0ce6aad005a84e1a 542 SUPERFAMILY SSF52540 347 531 1.31E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1087 445ce3252a502144d15a7bdfd3281260 199 SUPERFAMILY SSF159234 26 185 1.57E-16 T 14-10-2018 IPR035930 FomD-like superfamily Amir_1087 445ce3252a502144d15a7bdfd3281260 199 Pfam PF04167 Protein of unknown function (DUF402) 71 131 4.3E-10 T 14-10-2018 IPR007295 Domain of unknown function DUF402 Amir_1087 445ce3252a502144d15a7bdfd3281260 199 Gene3D G3DSA:2.40.380.10 2 183 4.0E-43 T 14-10-2018 IPR035930 FomD-like superfamily Amir_2007 ae44523cf1c68fb7a5992a38c23a9c1e 471 PIRSF PIRSF019251 1 467 5.1E-186 T 14-10-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 Amir_2007 ae44523cf1c68fb7a5992a38c23a9c1e 471 Gene3D G3DSA:1.10.260.40 1 69 4.2E-16 T 14-10-2018 Amir_2007 ae44523cf1c68fb7a5992a38c23a9c1e 471 SUPERFAMILY SSF47413 3 67 2.39E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2007 ae44523cf1c68fb7a5992a38c23a9c1e 471 Pfam PF06114 IrrE N-terminal-like domain 179 306 2.6E-18 T 14-10-2018 IPR010359 IrrE N-terminal-like domain Amir_2007 ae44523cf1c68fb7a5992a38c23a9c1e 471 SMART SM00530 9 64 1.1E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_2007 ae44523cf1c68fb7a5992a38c23a9c1e 471 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 307 463 1.7E-68 T 14-10-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator Amir_2007 ae44523cf1c68fb7a5992a38c23a9c1e 471 Pfam PF13560 Helix-turn-helix domain 7 60 1.6E-13 T 14-10-2018 Amir_6263 ccf9176635f75fbd11f958b0a36c3e8e 429 SUPERFAMILY SSF51338 24 414 9.81E-9 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_6263 ccf9176635f75fbd11f958b0a36c3e8e 429 Pfam PF01979 Amidohydrolase family 53 407 2.7E-42 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_6263 ccf9176635f75fbd11f958b0a36c3e8e 429 Gene3D G3DSA:2.30.40.10 15 411 8.3E-132 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_6263 ccf9176635f75fbd11f958b0a36c3e8e 429 Gene3D G3DSA:3.20.20.140 58 415 8.3E-132 T 14-10-2018 Amir_6263 ccf9176635f75fbd11f958b0a36c3e8e 429 SUPERFAMILY SSF51556 56 357 3.17E-66 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_3171 e4755e2a47ba063d560453fa53e2e371 293 Pfam PF13602 Zinc-binding dehydrogenase 186 291 1.7E-12 T 14-10-2018 Amir_3171 e4755e2a47ba063d560453fa53e2e371 293 Gene3D G3DSA:3.40.50.720 118 242 2.8E-68 T 14-10-2018 Amir_3171 e4755e2a47ba063d560453fa53e2e371 293 SMART SM00829 10 291 1.8E-12 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_3171 e4755e2a47ba063d560453fa53e2e371 293 SUPERFAMILY SSF51735 107 289 2.61E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3171 e4755e2a47ba063d560453fa53e2e371 293 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 93 1.4E-9 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_3171 e4755e2a47ba063d560453fa53e2e371 293 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 134 155 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Amir_3171 e4755e2a47ba063d560453fa53e2e371 293 Gene3D G3DSA:3.90.180.10 8 289 2.8E-68 T 14-10-2018 Amir_3171 e4755e2a47ba063d560453fa53e2e371 293 SUPERFAMILY SSF50129 1 139 6.85E-29 T 14-10-2018 IPR011032 GroES-like superfamily Amir_0854 0610073cf32fd69a7448501a334c08b9 122 SMART SM00028 38 71 75.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0854 0610073cf32fd69a7448501a334c08b9 122 SMART SM00028 72 105 95.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0854 0610073cf32fd69a7448501a334c08b9 122 SMART SM00028 4 37 2.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0854 0610073cf32fd69a7448501a334c08b9 122 SUPERFAMILY SSF48452 3 104 2.45E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0854 0610073cf32fd69a7448501a334c08b9 122 Pfam PF14559 Tetratricopeptide repeat 16 79 5.1E-8 T 14-10-2018 Amir_0854 0610073cf32fd69a7448501a334c08b9 122 Gene3D G3DSA:1.25.40.10 2 119 6.1E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_1580 cb7f13483577ba821b30bb19dc9ac3a7 262 Pfam PF01872 RibD C-terminal domain 44 229 1.4E-29 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Amir_1580 cb7f13483577ba821b30bb19dc9ac3a7 262 SUPERFAMILY SSF53597 42 260 1.2E-37 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_1580 cb7f13483577ba821b30bb19dc9ac3a7 262 Gene3D G3DSA:3.40.430.10 18 261 2.7E-63 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_1242 c120ae315b18221103a8203e05e3a2d2 384 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 380 36.464 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Amir_1242 c120ae315b18221103a8203e05e3a2d2 384 SUPERFAMILY SSF49493 260 350 4.45E-18 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Amir_1242 c120ae315b18221103a8203e05e3a2d2 384 SMART SM00271 3 58 1.9E-28 T 14-10-2018 IPR001623 DnaJ domain Amir_1242 c120ae315b18221103a8203e05e3a2d2 384 SUPERFAMILY SSF57938 132 212 7.85E-17 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Amir_1242 c120ae315b18221103a8203e05e3a2d2 384 Gene3D G3DSA:2.10.230.10 145 209 4.4E-31 T 14-10-2018 Amir_1242 c120ae315b18221103a8203e05e3a2d2 384 Gene3D G3DSA:1.10.287.110 1 111 3.0E-29 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Amir_1242 c120ae315b18221103a8203e05e3a2d2 384 Gene3D G3DSA:2.60.260.20 115 251 4.4E-31 T 14-10-2018 Amir_1242 c120ae315b18221103a8203e05e3a2d2 384 PRINTS PR00625 DnaJ domain signature 6 24 6.1E-15 T 14-10-2018 IPR001623 DnaJ domain Amir_1242 c120ae315b18221103a8203e05e3a2d2 384 PRINTS PR00625 DnaJ domain signature 38 58 6.1E-15 T 14-10-2018 IPR001623 DnaJ domain Amir_1242 c120ae315b18221103a8203e05e3a2d2 384 PRINTS PR00625 DnaJ domain signature 58 77 6.1E-15 T 14-10-2018 IPR001623 DnaJ domain Amir_1242 c120ae315b18221103a8203e05e3a2d2 384 SUPERFAMILY SSF46565 3 102 1.23E-31 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Amir_1242 c120ae315b18221103a8203e05e3a2d2 384 SUPERFAMILY SSF49493 113 265 4.19E-15 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Amir_1242 c120ae315b18221103a8203e05e3a2d2 384 Gene3D G3DSA:2.60.260.20 256 363 1.4E-27 T 14-10-2018 Amir_1242 c120ae315b18221103a8203e05e3a2d2 384 Pfam PF00684 DnaJ central domain 145 209 1.5E-11 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Amir_1242 c120ae315b18221103a8203e05e3a2d2 384 Pfam PF01556 DnaJ C terminal domain 120 339 9.6E-36 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal Amir_1242 c120ae315b18221103a8203e05e3a2d2 384 Pfam PF00226 DnaJ domain 4 63 4.5E-23 T 14-10-2018 IPR001623 DnaJ domain Amir_1795 53b9920b38fe3955ca2508417c1139d7 379 SUPERFAMILY SSF51658 4 377 2.49E-106 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Amir_1795 53b9920b38fe3955ca2508417c1139d7 379 Pfam PF01261 Xylose isomerase-like TIM barrel 34 258 2.6E-26 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Amir_1795 53b9920b38fe3955ca2508417c1139d7 379 Gene3D G3DSA:3.20.20.150 1 379 4.3E-132 T 14-10-2018 Amir_1795 53b9920b38fe3955ca2508417c1139d7 379 TIGRFAM TIGR02631 xylA_Arthro: xylose isomerase 3 376 1.4E-198 T 14-10-2018 IPR013453 Xylose isomerase, actinobacteria GO:0009045|GO:0042732 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amir_1795 53b9920b38fe3955ca2508417c1139d7 379 Hamap MF_00455 Xylose isomerase [xylA]. 1 375 32.567 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amir_1795 53b9920b38fe3955ca2508417c1139d7 379 PRINTS PR00688 Xylose isomerase signature 122 143 7.1E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amir_1795 53b9920b38fe3955ca2508417c1139d7 379 PRINTS PR00688 Xylose isomerase signature 171 195 7.1E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amir_1795 53b9920b38fe3955ca2508417c1139d7 379 PRINTS PR00688 Xylose isomerase signature 274 285 7.1E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amir_1795 53b9920b38fe3955ca2508417c1139d7 379 PRINTS PR00688 Xylose isomerase signature 75 95 7.1E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amir_1795 53b9920b38fe3955ca2508417c1139d7 379 PRINTS PR00688 Xylose isomerase signature 149 168 7.1E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amir_1795 53b9920b38fe3955ca2508417c1139d7 379 PRINTS PR00688 Xylose isomerase signature 98 117 7.1E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amir_1795 53b9920b38fe3955ca2508417c1139d7 379 PRINTS PR00688 Xylose isomerase signature 213 240 7.1E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amir_1795 53b9920b38fe3955ca2508417c1139d7 379 PRINTS PR00688 Xylose isomerase signature 241 252 7.1E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amir_1795 53b9920b38fe3955ca2508417c1139d7 379 PRINTS PR00688 Xylose isomerase signature 38 60 7.1E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amir_4827 138c94b169b7b72e21ab809e1db2b1a7 112 Gene3D G3DSA:2.30.110.10 15 110 1.8E-6 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_4827 138c94b169b7b72e21ab809e1db2b1a7 112 Pfam PF04075 F420H(2)-dependent quinone reductase 24 73 2.0E-5 T 14-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 Amir_1609 1aa830f5b403a03212a00853801bfdb4 318 Pfam PF00107 Zinc-binding dehydrogenase 141 259 8.4E-31 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_1609 1aa830f5b403a03212a00853801bfdb4 318 SUPERFAMILY SSF51735 102 281 7.89E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1609 1aa830f5b403a03212a00853801bfdb4 318 Gene3D G3DSA:3.90.180.10 9 312 1.1E-86 T 14-10-2018 Amir_1609 1aa830f5b403a03212a00853801bfdb4 318 Gene3D G3DSA:3.40.50.720 113 259 1.1E-86 T 14-10-2018 Amir_1609 1aa830f5b403a03212a00853801bfdb4 318 SMART SM00829 10 314 2.1E-22 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_1609 1aa830f5b403a03212a00853801bfdb4 318 SUPERFAMILY SSF50129 1 129 2.83E-28 T 14-10-2018 IPR011032 GroES-like superfamily Amir_5300 b92befbdf628f9e162d92ae28839898d 137 Pfam PF14430 Immunity protein Imm1 12 136 5.0E-28 T 14-10-2018 IPR025680 Immunity protein Imm1 Amir_1515 45fede6630e1306d55c0383055b4a772 155 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 4 146 31.472 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Amir_1515 45fede6630e1306d55c0383055b4a772 155 Gene3D G3DSA:2.70.40.10 2 149 2.7E-51 T 14-10-2018 IPR036157 dUTPase-like superfamily Amir_1515 45fede6630e1306d55c0383055b4a772 155 Pfam PF00692 dUTPase 18 145 1.2E-31 T 14-10-2018 IPR029054 dUTPase-like Amir_1515 45fede6630e1306d55c0383055b4a772 155 TIGRFAM TIGR00576 dut: dUTP diphosphatase 7 145 7.7E-50 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Amir_1515 45fede6630e1306d55c0383055b4a772 155 SUPERFAMILY SSF51283 4 145 5.23E-48 T 14-10-2018 IPR036157 dUTPase-like superfamily Amir_3199 636952f20dd824a951463dba672eca77 402 Gene3D G3DSA:3.40.50.2000 200 376 8.6E-77 T 14-10-2018 Amir_3199 636952f20dd824a951463dba672eca77 402 SUPERFAMILY SSF53756 2 394 1.54E-59 T 14-10-2018 Amir_3199 636952f20dd824a951463dba672eca77 402 Gene3D G3DSA:3.40.50.2000 2 384 8.6E-77 T 14-10-2018 Amir_3199 636952f20dd824a951463dba672eca77 402 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 281 365 2.5E-17 T 14-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 Amir_0227 16080577404468c4b720754c91c52d15 604 Gene3D G3DSA:3.40.50.1820 355 604 7.9E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0227 16080577404468c4b720754c91c52d15 604 SUPERFAMILY SSF69304 34 345 2.35E-20 T 14-10-2018 Amir_0227 16080577404468c4b720754c91c52d15 604 Gene3D G3DSA:2.120.10.30 24 122 3.7E-6 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_0227 16080577404468c4b720754c91c52d15 604 Gene3D G3DSA:2.120.10.30 123 351 1.1E-9 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_0227 16080577404468c4b720754c91c52d15 604 Pfam PF00326 Prolyl oligopeptidase family 397 603 4.9E-44 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Amir_0227 16080577404468c4b720754c91c52d15 604 SUPERFAMILY SSF53474 363 603 5.14E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0951 ec092bfcb4fa61ec41ce18f7a0f59121 772 SUPERFAMILY SSF52540 19 329 1.6E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0951 ec092bfcb4fa61ec41ce18f7a0f59121 772 Pfam PF04408 Helicase associated domain (HA2) 381 435 8.9E-9 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 Amir_0951 ec092bfcb4fa61ec41ce18f7a0f59121 772 SMART SM00490 222 319 2.9E-13 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_0951 ec092bfcb4fa61ec41ce18f7a0f59121 772 Pfam PF08482 ATP-dependent helicase C-terminal 641 764 8.8E-45 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal Amir_0951 ec092bfcb4fa61ec41ce18f7a0f59121 772 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 6 771 2.1E-208 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 Amir_0951 ec092bfcb4fa61ec41ce18f7a0f59121 772 Gene3D G3DSA:3.40.50.300 2 175 1.2E-49 T 14-10-2018 Amir_0951 ec092bfcb4fa61ec41ce18f7a0f59121 772 SMART SM00487 1 182 3.0E-16 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_0951 ec092bfcb4fa61ec41ce18f7a0f59121 772 PIRSF PIRSF005496 2 772 3.6E-245 T 14-10-2018 Amir_0951 ec092bfcb4fa61ec41ce18f7a0f59121 772 SMART SM00847 379 473 2.7E-8 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 Amir_0951 ec092bfcb4fa61ec41ce18f7a0f59121 772 Gene3D G3DSA:3.40.50.300 176 336 3.6E-41 T 14-10-2018 Amir_0951 ec092bfcb4fa61ec41ce18f7a0f59121 772 Pfam PF00271 Helicase conserved C-terminal domain 206 317 7.2E-12 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_0951 ec092bfcb4fa61ec41ce18f7a0f59121 772 Gene3D G3DSA:1.20.120.1080 366 455 2.1E-7 T 14-10-2018 Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 732 750 6.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 756 769 6.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 698 712 6.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 663 768 4.8E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 Pfam PF00360 Phytochrome region 368 536 1.3E-22 T 14-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 Pfam PF00512 His Kinase A (phospho-acceptor) domain 554 619 3.0E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 SUPERFAMILY SSF55785 35 147 4.03E-22 T 14-10-2018 IPR035965 PAS domain superfamily Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 SUPERFAMILY SSF55781 160 344 3.43E-55 T 14-10-2018 Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 Gene3D G3DSA:3.30.450.20 49 281 3.0E-133 T 14-10-2018 Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 Pfam PF01590 GAF domain 176 341 9.4E-18 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 SUPERFAMILY SSF55874 610 768 1.09E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 Pfam PF08446 PAS fold 44 147 2.5E-10 T 14-10-2018 IPR013654 PAS fold-2 GO:0006355 Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 SUPERFAMILY SSF55781 328 531 1.67E-27 T 14-10-2018 Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 Gene3D G3DSA:3.30.450.270 349 526 3.0E-133 T 14-10-2018 Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 Gene3D G3DSA:1.10.287.130 541 619 7.3E-10 T 14-10-2018 Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 SMART SM00387 662 772 8.7E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 Gene3D G3DSA:3.30.450.40 154 508 3.0E-133 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 SMART SM00388 552 620 6.5E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 SMART SM00065 175 346 2.3E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 SUPERFAMILY SSF47384 538 618 4.9E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_2910 89065434b66b92856dfa0f1e2efe31ee 783 Gene3D G3DSA:3.30.565.10 620 770 5.7E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5156 830f06456b78602b053353cd2a60bd98 345 SUPERFAMILY SSF51735 4 315 9.69E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5156 830f06456b78602b053353cd2a60bd98 345 Pfam PF00106 short chain dehydrogenase 106 256 3.7E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5156 830f06456b78602b053353cd2a60bd98 345 Gene3D G3DSA:3.40.50.720 57 343 2.4E-35 T 14-10-2018 Amir_5156 830f06456b78602b053353cd2a60bd98 345 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5156 830f06456b78602b053353cd2a60bd98 345 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 236 253 1.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5156 830f06456b78602b053353cd2a60bd98 345 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 193 1.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5156 830f06456b78602b053353cd2a60bd98 345 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 234 1.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5156 830f06456b78602b053353cd2a60bd98 345 Gene3D G3DSA:3.40.50.720 2 56 1.4E-5 T 14-10-2018 Amir_1553 52033894904a54a30b7b7e0481d7779c 473 SUPERFAMILY SSF51905 5 465 3.37E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1553 52033894904a54a30b7b7e0481d7779c 473 Gene3D G3DSA:1.10.3110.10 105 198 1.1E-120 T 14-10-2018 Amir_1553 52033894904a54a30b7b7e0481d7779c 473 Gene3D G3DSA:3.50.50.60 7 456 1.1E-120 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1553 52033894904a54a30b7b7e0481d7779c 473 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 4 466 1.7E-55 T 14-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Amir_1553 52033894904a54a30b7b7e0481d7779c 473 SUPERFAMILY SSF54373 306 416 3.73E-21 T 14-10-2018 Amir_1553 52033894904a54a30b7b7e0481d7779c 473 Pfam PF01593 Flavin containing amine oxidoreductase 13 464 1.6E-46 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Amir_1553 52033894904a54a30b7b7e0481d7779c 473 Gene3D G3DSA:3.90.660.20 39 415 1.1E-120 T 14-10-2018 Amir_2100 628cce472099f399a6502534f78558b1 280 SUPERFAMILY SSF56317 3 277 4.58E-75 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amir_2100 628cce472099f399a6502534f78558b1 280 Pfam PF00795 Carbon-nitrogen hydrolase 6 260 9.6E-63 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Amir_2100 628cce472099f399a6502534f78558b1 280 Gene3D G3DSA:3.60.110.10 2 279 4.3E-98 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amir_2596 3d96d274b012033ae3d6a030825ca35c 527 Pfam PF07690 Major Facilitator Superfamily 63 465 3.8E-56 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2596 3d96d274b012033ae3d6a030825ca35c 527 Gene3D G3DSA:1.20.1720.10 59 275 5.7E-53 T 14-10-2018 Amir_2596 3d96d274b012033ae3d6a030825ca35c 527 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 58 469 4.5E-74 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Amir_2596 3d96d274b012033ae3d6a030825ca35c 527 ProSitePatterns PS00217 Sugar transport proteins signature 2. 154 179 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Amir_2596 3d96d274b012033ae3d6a030825ca35c 527 SUPERFAMILY SSF103473 36 504 1.31E-74 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2596 3d96d274b012033ae3d6a030825ca35c 527 Gene3D G3DSA:1.20.1250.20 314 507 4.6E-20 T 14-10-2018 Amir_2596 3d96d274b012033ae3d6a030825ca35c 527 PRINTS PR01036 Tetracycline resistance protein TetB signature 152 172 3.4E-9 T 14-10-2018 Amir_2596 3d96d274b012033ae3d6a030825ca35c 527 PRINTS PR01036 Tetracycline resistance protein TetB signature 182 206 3.4E-9 T 14-10-2018 Amir_2596 3d96d274b012033ae3d6a030825ca35c 527 PRINTS PR01036 Tetracycline resistance protein TetB signature 61 85 3.4E-9 T 14-10-2018 Amir_2645 b142a6a62cd8030117c0f5a1cded9c6a 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 62 78 1.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2645 b142a6a62cd8030117c0f5a1cded9c6a 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 62 1.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2645 b142a6a62cd8030117c0f5a1cded9c6a 254 SMART SM00895 113 235 2.2E-22 T 14-10-2018 IPR011711 GntR, C-terminal Amir_2645 b142a6a62cd8030117c0f5a1cded9c6a 254 SUPERFAMILY SSF48008 112 238 2.41E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_2645 b142a6a62cd8030117c0f5a1cded9c6a 254 Gene3D G3DSA:1.10.10.10 25 89 1.4E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2645 b142a6a62cd8030117c0f5a1cded9c6a 254 SMART SM00345 29 88 1.9E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2645 b142a6a62cd8030117c0f5a1cded9c6a 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 87 6.3E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2645 b142a6a62cd8030117c0f5a1cded9c6a 254 SUPERFAMILY SSF46785 19 92 1.01E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2645 b142a6a62cd8030117c0f5a1cded9c6a 254 Gene3D G3DSA:1.20.120.530 94 242 1.2E-32 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_2645 b142a6a62cd8030117c0f5a1cded9c6a 254 Pfam PF07729 FCD domain 113 233 6.5E-27 T 14-10-2018 IPR011711 GntR, C-terminal Amir_1227 0eb859e8edbf16561cc2d50b46f6a48e 146 SUPERFAMILY SSF53933 53 143 9.92E-33 T 14-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 Amir_1227 0eb859e8edbf16561cc2d50b46f6a48e 146 Gene3D G3DSA:3.10.450.30 50 145 1.8E-35 T 14-10-2018 Amir_1227 0eb859e8edbf16561cc2d50b46f6a48e 146 Pfam PF00545 ribonuclease 61 140 9.8E-29 T 14-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 Amir_5179 bfb3fdf42d067a2bca6e8b846a662793 195 Gene3D G3DSA:3.10.50.40 83 195 2.0E-29 T 14-10-2018 Amir_5179 bfb3fdf42d067a2bca6e8b846a662793 195 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 102 190 6.4E-19 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Amir_5179 bfb3fdf42d067a2bca6e8b846a662793 195 SUPERFAMILY SSF54534 76 195 1.96E-28 T 14-10-2018 Amir_6344 4ccf8dd6657d51a827a28f8ac41a95f3 822 SUPERFAMILY SSF53448 1 244 2.31E-52 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_6344 4ccf8dd6657d51a827a28f8ac41a95f3 822 Gene3D G3DSA:3.90.550.10 1 224 1.7E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_6344 4ccf8dd6657d51a827a28f8ac41a95f3 822 Pfam PF00535 Glycosyl transferase family 2 2 168 3.1E-17 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_6344 4ccf8dd6657d51a827a28f8ac41a95f3 822 Pfam PF13692 Glycosyl transferases group 1 571 725 5.7E-11 T 14-10-2018 Amir_6344 4ccf8dd6657d51a827a28f8ac41a95f3 822 Gene3D G3DSA:3.40.50.2000 553 741 3.0E-23 T 14-10-2018 Amir_6344 4ccf8dd6657d51a827a28f8ac41a95f3 822 SUPERFAMILY SSF53756 373 759 4.45E-26 T 14-10-2018 Amir_5086 06861458884f27fbae563ab6e56fd417 251 Gene3D G3DSA:3.40.1080.10 2 250 6.9E-82 T 14-10-2018 Amir_5086 06861458884f27fbae563ab6e56fd417 251 SMART SM00882 8 217 2.9E-32 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Amir_5086 06861458884f27fbae563ab6e56fd417 251 SUPERFAMILY SSF100950 4 245 2.51E-71 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Amir_5086 06861458884f27fbae563ab6e56fd417 251 Pfam PF01144 Coenzyme A transferase 8 211 3.1E-37 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Amir_5672 82a2cc14885114fd5c436d704542cc2d 372 SUPERFAMILY SSF55021 4 70 2.56E-6 T 14-10-2018 Amir_5672 82a2cc14885114fd5c436d704542cc2d 372 Pfam PF00583 Acetyltransferase (GNAT) family 231 317 2.6E-7 T 14-10-2018 IPR000182 GNAT domain Amir_5672 82a2cc14885114fd5c436d704542cc2d 372 SUPERFAMILY SSF55729 183 326 2.44E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_5672 82a2cc14885114fd5c436d704542cc2d 372 Gene3D G3DSA:3.40.630.30 179 345 4.8E-32 T 14-10-2018 Amir_1931 4ef6e07b84ad77c3add31d5c419c7998 300 SUPERFAMILY SSF51735 1 266 1.7E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1931 4ef6e07b84ad77c3add31d5c419c7998 300 Pfam PF13460 NAD(P)H-binding 7 117 1.8E-13 T 14-10-2018 IPR016040 NAD(P)-binding domain Amir_1931 4ef6e07b84ad77c3add31d5c419c7998 300 Gene3D G3DSA:3.40.50.720 2 263 9.3E-44 T 14-10-2018 Amir_2710 0a00149129c5e59aac167bcea1071c3b 237 SUPERFAMILY SSF56281 2 229 5.82E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_2710 0a00149129c5e59aac167bcea1071c3b 237 Gene3D G3DSA:3.60.15.10 1 228 1.6E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_2710 0a00149129c5e59aac167bcea1071c3b 237 SMART SM00849 14 217 1.2E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_2710 0a00149129c5e59aac167bcea1071c3b 237 Pfam PF00753 Metallo-beta-lactamase superfamily 12 217 1.1E-26 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_3521 3a27ca827ebdcf92ef09bf9b7611fb2a 228 Gene3D G3DSA:3.40.50.1240 1 207 6.7E-44 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_3521 3a27ca827ebdcf92ef09bf9b7611fb2a 228 SMART SM00855 3 161 8.1E-17 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_3521 3a27ca827ebdcf92ef09bf9b7611fb2a 228 SUPERFAMILY SSF53254 3 200 2.14E-42 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_3521 3a27ca827ebdcf92ef09bf9b7611fb2a 228 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 201 1.2E-46 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_3521 3a27ca827ebdcf92ef09bf9b7611fb2a 228 TIGRFAM TIGR03848 MSMEG_4193: probable phosphomutase, MSMEG_4193 family 3 205 2.4E-98 T 14-10-2018 IPR022492 Phosphomutase MSMEG4193, putative Amir_0172 dd21fbbb2c5c4f795163da6b3e9621a0 437 SUPERFAMILY SSF56349 75 398 9.12E-57 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amir_0172 dd21fbbb2c5c4f795163da6b3e9621a0 437 Gene3D G3DSA:1.10.150.130 72 190 2.8E-23 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Amir_0172 dd21fbbb2c5c4f795163da6b3e9621a0 437 Pfam PF00589 Phage integrase family 194 396 5.3E-20 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amir_0172 dd21fbbb2c5c4f795163da6b3e9621a0 437 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 76 131 1.2E-5 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Amir_0172 dd21fbbb2c5c4f795163da6b3e9621a0 437 Gene3D G3DSA:1.10.443.10 191 407 8.2E-43 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amir_0959 41b8b87b6ca85bb2f9bb610bcb9dc5f8 442 Gene3D G3DSA:3.90.220.20 4 212 3.6E-38 T 14-10-2018 Amir_0959 41b8b87b6ca85bb2f9bb610bcb9dc5f8 442 Gene3D G3DSA:3.90.220.20 219 430 8.3E-34 T 14-10-2018 Amir_0959 41b8b87b6ca85bb2f9bb610bcb9dc5f8 442 SUPERFAMILY SSF116734 219 434 5.56E-38 T 14-10-2018 Amir_0959 41b8b87b6ca85bb2f9bb610bcb9dc5f8 442 Pfam PF01420 Type I restriction modification DNA specificity domain 229 391 3.2E-14 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Amir_0959 41b8b87b6ca85bb2f9bb610bcb9dc5f8 442 Pfam PF01420 Type I restriction modification DNA specificity domain 48 195 1.7E-13 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Amir_0959 41b8b87b6ca85bb2f9bb610bcb9dc5f8 442 SUPERFAMILY SSF116734 9 211 3.43E-35 T 14-10-2018 Amir_6700 77fd4f1fedbffe9a2041a6cdcc05398e 353 Pfam PF00501 AMP-binding enzyme 30 254 6.6E-28 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_6700 77fd4f1fedbffe9a2041a6cdcc05398e 353 Pfam PF13193 AMP-binding enzyme C-terminal domain 264 339 2.1E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_6700 77fd4f1fedbffe9a2041a6cdcc05398e 353 Gene3D G3DSA:3.30.300.310 250 351 2.9E-21 T 14-10-2018 Amir_6700 77fd4f1fedbffe9a2041a6cdcc05398e 353 SUPERFAMILY SSF56801 30 351 3.27E-64 T 14-10-2018 Amir_6700 77fd4f1fedbffe9a2041a6cdcc05398e 353 Gene3D G3DSA:3.40.50.12780 19 247 1.4E-46 T 14-10-2018 Amir_3551 a2f06fdb41e5053cd44e29463b7b0dc4 396 SUPERFAMILY SSF54897 50 115 2.83E-10 T 14-10-2018 Amir_3551 a2f06fdb41e5053cd44e29463b7b0dc4 396 Gene3D G3DSA:3.40.50.200 122 394 1.8E-72 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_3551 a2f06fdb41e5053cd44e29463b7b0dc4 396 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 190 200 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Amir_3551 a2f06fdb41e5053cd44e29463b7b0dc4 396 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 338 348 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_3551 a2f06fdb41e5053cd44e29463b7b0dc4 396 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 155 166 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_3551 a2f06fdb41e5053cd44e29463b7b0dc4 396 SUPERFAMILY SSF52743 126 377 4.58E-62 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_3551 a2f06fdb41e5053cd44e29463b7b0dc4 396 Pfam PF00082 Subtilase family 157 376 5.2E-27 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_3551 a2f06fdb41e5053cd44e29463b7b0dc4 396 Gene3D G3DSA:3.30.70.80 45 116 7.4E-13 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Amir_3551 a2f06fdb41e5053cd44e29463b7b0dc4 396 PRINTS PR00723 Subtilisin serine protease family (S8) signature 150 169 2.5E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_3551 a2f06fdb41e5053cd44e29463b7b0dc4 396 PRINTS PR00723 Subtilisin serine protease family (S8) signature 337 353 2.5E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_3551 a2f06fdb41e5053cd44e29463b7b0dc4 396 PRINTS PR00723 Subtilisin serine protease family (S8) signature 186 199 2.5E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_3551 a2f06fdb41e5053cd44e29463b7b0dc4 396 Pfam PF05922 Peptidase inhibitor I9 76 114 1.9E-5 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Amir_4451 07ec596a6d9a177024e0621f9f11ca99 266 SMART SM00862 15 94 0.0025 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4451 07ec596a6d9a177024e0621f9f11ca99 266 SMART SM01043 101 246 1.2E-43 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_4451 07ec596a6d9a177024e0621f9f11ca99 266 SUPERFAMILY SSF48452 96 256 4.34E-38 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4451 07ec596a6d9a177024e0621f9f11ca99 266 SUPERFAMILY SSF46894 2 94 9.92E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4451 07ec596a6d9a177024e0621f9f11ca99 266 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 93 6.5E-6 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4451 07ec596a6d9a177024e0621f9f11ca99 266 Gene3D G3DSA:1.25.40.10 98 259 1.9E-46 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4451 07ec596a6d9a177024e0621f9f11ca99 266 Pfam PF03704 Bacterial transcriptional activator domain 101 246 8.2E-43 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_4451 07ec596a6d9a177024e0621f9f11ca99 266 Gene3D G3DSA:1.10.10.10 1 96 1.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 Gene3D G3DSA:2.60.40.1180 335 422 4.6E-23 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 SUPERFAMILY SSF51011 334 421 3.29E-20 T 14-10-2018 Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 PRINTS PR00740 Glycosyl hydrolase family 27 signature 98 113 3.6E-59 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 PRINTS PR00740 Glycosyl hydrolase family 27 signature 60 79 3.6E-59 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 PRINTS PR00740 Glycosyl hydrolase family 27 signature 288 309 3.6E-59 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 PRINTS PR00740 Glycosyl hydrolase family 27 signature 202 220 3.6E-59 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 PRINTS PR00740 Glycosyl hydrolase family 27 signature 267 286 3.6E-59 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 PRINTS PR00740 Glycosyl hydrolase family 27 signature 175 192 3.6E-59 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 PRINTS PR00740 Glycosyl hydrolase family 27 signature 139 160 3.6E-59 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 450 522 4.3E-11 T 14-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 Pfam PF08305 NPCBM/NEW2 domain 550 689 4.6E-44 T 14-10-2018 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 SUPERFAMILY SSF51445 57 333 4.91E-98 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 SMART SM00776 547 692 2.4E-65 T 14-10-2018 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 Pfam PF16499 Alpha galactosidase A 65 332 5.8E-80 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 SUPERFAMILY SSF49785 549 692 2.98E-41 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 Gene3D G3DSA:2.60.120.1060 547 691 2.2E-42 T 14-10-2018 IPR038637 NPCBM domain superfamily Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 ProSitePatterns PS00512 Alpha-galactosidase signature. 103 119 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1044 1dd85f10e0cec93870d56b6ba6ac1007 693 Gene3D G3DSA:3.20.20.70 60 334 2.2E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_6774 d7d6472ce0fc89a71e72ba963fa77c60 128 Gene3D G3DSA:1.10.260.40 13 105 7.6E-17 T 14-10-2018 Amir_6774 d7d6472ce0fc89a71e72ba963fa77c60 128 SMART SM00530 19 74 1.6E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_6774 d7d6472ce0fc89a71e72ba963fa77c60 128 SUPERFAMILY SSF47413 16 76 2.17E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_6774 d7d6472ce0fc89a71e72ba963fa77c60 128 Pfam PF01381 Helix-turn-helix 20 72 5.7E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_4199 7c029bb9a104c2916f572336e0326ddd 474 SUPERFAMILY SSF51126 183 469 3.46E-64 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_4199 7c029bb9a104c2916f572336e0326ddd 474 SUPERFAMILY SSF50370 35 175 3.47E-41 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_4199 7c029bb9a104c2916f572336e0326ddd 474 Gene3D G3DSA:2.160.20.10 184 472 1.0E-80 T 14-10-2018 IPR012334 Pectin lyase fold Amir_4199 7c029bb9a104c2916f572336e0326ddd 474 SMART SM00710 373 395 1500.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_4199 7c029bb9a104c2916f572336e0326ddd 474 SMART SM00710 300 321 1800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_4199 7c029bb9a104c2916f572336e0326ddd 474 SMART SM00710 265 299 1.5 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_4199 7c029bb9a104c2916f572336e0326ddd 474 SMART SM00458 37 174 3.6E-19 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4199 7c029bb9a104c2916f572336e0326ddd 474 Gene3D G3DSA:2.80.10.50 79 124 2.6E-11 T 14-10-2018 Amir_4199 7c029bb9a104c2916f572336e0326ddd 474 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 75 151 6.1E-21 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4199 7c029bb9a104c2916f572336e0326ddd 474 SMART SM00656 198 412 8.6E-12 T 14-10-2018 IPR002022 Pectate lyase Amir_4199 7c029bb9a104c2916f572336e0326ddd 474 Gene3D G3DSA:2.80.10.50 30 78 6.6E-14 T 14-10-2018 Amir_4199 7c029bb9a104c2916f572336e0326ddd 474 Gene3D G3DSA:2.80.10.50 125 183 1.6E-9 T 14-10-2018 Amir_4199 7c029bb9a104c2916f572336e0326ddd 474 Pfam PF00544 Pectate lyase 237 404 3.0E-20 T 14-10-2018 IPR002022 Pectate lyase Amir_2357 c6eae2030bc873334e162ed8e34f198e 459 SUPERFAMILY SSF64518 158 455 4.45E-19 T 14-10-2018 Amir_2357 c6eae2030bc873334e162ed8e34f198e 459 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 387 455 2.3E-14 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Amir_2357 c6eae2030bc873334e162ed8e34f198e 459 PRINTS PR01005 Flagellar hook-associated protein signature 132 152 8.1E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Amir_2357 c6eae2030bc873334e162ed8e34f198e 459 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 8.1E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Amir_2357 c6eae2030bc873334e162ed8e34f198e 459 PRINTS PR01005 Flagellar hook-associated protein signature 165 189 8.1E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Amir_2357 c6eae2030bc873334e162ed8e34f198e 459 Pfam PF00460 Flagella basal body rod protein 10 37 5.3E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Amir_2357 c6eae2030bc873334e162ed8e34f198e 459 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 7 455 5.2E-91 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Amir_6393 8a9f3ab137ecb719055b8d6b44d15bb5 206 Pfam PF02545 Maf-like protein 2 192 1.4E-41 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Amir_6393 8a9f3ab137ecb719055b8d6b44d15bb5 206 Gene3D G3DSA:3.90.950.10 1 198 2.8E-53 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Amir_6393 8a9f3ab137ecb719055b8d6b44d15bb5 206 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 191 2.2E-44 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Amir_6393 8a9f3ab137ecb719055b8d6b44d15bb5 206 PIRSF PIRSF006305 1 199 9.1E-36 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Amir_6393 8a9f3ab137ecb719055b8d6b44d15bb5 206 SUPERFAMILY SSF52972 2 192 9.81E-45 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Amir_6393 8a9f3ab137ecb719055b8d6b44d15bb5 206 Hamap MF_00528 Septum formation protein Maf [maf]. 2 197 24.362 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Amir_3047 18008ea59453145babf26dbfeeadd255 468 SUPERFAMILY SSF53067 3 226 7.56E-38 T 14-10-2018 Amir_3047 18008ea59453145babf26dbfeeadd255 468 SUPERFAMILY SSF53067 234 430 5.4E-32 T 14-10-2018 Amir_3047 18008ea59453145babf26dbfeeadd255 468 Gene3D G3DSA:3.30.420.40 1 217 2.9E-67 T 14-10-2018 Amir_3047 18008ea59453145babf26dbfeeadd255 468 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 224 6.4E-17 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Amir_3047 18008ea59453145babf26dbfeeadd255 468 Gene3D G3DSA:3.30.420.40 218 464 4.2E-90 T 14-10-2018 Amir_3047 18008ea59453145babf26dbfeeadd255 468 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 235 422 9.0E-34 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Amir_6497 9bb2f6c9cb34771bcc2b4ae1c544b72a 330 Pfam PF04657 Putative inner membrane exporter, YdcZ 31 173 5.6E-28 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ Amir_6497 9bb2f6c9cb34771bcc2b4ae1c544b72a 330 Pfam PF04657 Putative inner membrane exporter, YdcZ 189 322 1.2E-14 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ Amir_1619 5e182e61ede34924112aec59c2d430ef 325 Gene3D G3DSA:1.10.443.10 132 324 5.4E-33 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amir_1619 5e182e61ede34924112aec59c2d430ef 325 Pfam PF00589 Phage integrase family 135 307 9.2E-21 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amir_1619 5e182e61ede34924112aec59c2d430ef 325 Gene3D G3DSA:1.10.150.130 11 131 1.7E-9 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Amir_1619 5e182e61ede34924112aec59c2d430ef 325 SUPERFAMILY SSF56349 15 310 3.24E-40 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amir_1619 5e182e61ede34924112aec59c2d430ef 325 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 18 113 3.4E-10 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Amir_4459 9835b7780f14a94a7aa36b65bcf63089 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4459 9835b7780f14a94a7aa36b65bcf63089 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4459 9835b7780f14a94a7aa36b65bcf63089 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4459 9835b7780f14a94a7aa36b65bcf63089 303 Gene3D G3DSA:3.40.50.720 2 300 1.2E-71 T 14-10-2018 Amir_4459 9835b7780f14a94a7aa36b65bcf63089 303 Pfam PF00106 short chain dehydrogenase 9 205 1.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4459 9835b7780f14a94a7aa36b65bcf63089 303 SUPERFAMILY SSF51735 5 251 2.86E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0501 1be8a62ef0f9e5daf88c1db9626de9c9 219 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 16 219 36.352 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amir_0501 1be8a62ef0f9e5daf88c1db9626de9c9 219 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 124 6.1E-20 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amir_0501 1be8a62ef0f9e5daf88c1db9626de9c9 219 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 189 202 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amir_0501 1be8a62ef0f9e5daf88c1db9626de9c9 219 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 179 219 1.6E-16 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amir_0501 1be8a62ef0f9e5daf88c1db9626de9c9 219 Gene3D G3DSA:2.30.110.10 16 215 1.1E-76 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_0501 1be8a62ef0f9e5daf88c1db9626de9c9 219 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 4 219 4.4E-75 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amir_0501 1be8a62ef0f9e5daf88c1db9626de9c9 219 SUPERFAMILY SSF50475 17 219 2.27E-63 T 14-10-2018 Amir_0501 1be8a62ef0f9e5daf88c1db9626de9c9 219 PIRSF PIRSF000190 2 219 9.7E-78 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amir_5798 d894c3899ce3689dba12ca12c3efde76 203 Pfam PF02464 Competence-damaged protein 42 197 5.9E-45 T 14-10-2018 IPR008136 CinA, C-terminal Amir_5798 d894c3899ce3689dba12ca12c3efde76 203 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 50 198 6.7E-29 T 14-10-2018 IPR008136 CinA, C-terminal Amir_5798 d894c3899ce3689dba12ca12c3efde76 203 SUPERFAMILY SSF142433 41 198 9.02E-44 T 14-10-2018 IPR036653 CinA-like, C-terminal Amir_5798 d894c3899ce3689dba12ca12c3efde76 203 Gene3D G3DSA:3.90.950.20 30 200 5.8E-50 T 14-10-2018 IPR036653 CinA-like, C-terminal Amir_1852 0250cf5d761227ab5853b5796953418b 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 319 1.2E-41 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amir_0353 43737906c5cfff40ad69a67abece029f 280 SUPERFAMILY SSF52540 12 240 2.09E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0353 43737906c5cfff40ad69a67abece029f 280 Gene3D G3DSA:3.40.50.300 11 264 1.5E-56 T 14-10-2018 Amir_0353 43737906c5cfff40ad69a67abece029f 280 SMART SM00382 42 229 8.9E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0353 43737906c5cfff40ad69a67abece029f 280 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0353 43737906c5cfff40ad69a67abece029f 280 Pfam PF00005 ABC transporter 34 179 5.0E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4450 e99a986a3c25895b9d2b2cd8cf59a384 320 Gene3D G3DSA:1.10.620.20 14 313 7.6E-62 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Amir_4450 e99a986a3c25895b9d2b2cd8cf59a384 320 Pfam PF00268 Ribonucleotide reductase, small chain 40 261 1.5E-13 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_4450 e99a986a3c25895b9d2b2cd8cf59a384 320 SUPERFAMILY SSF47240 21 300 1.46E-29 T 14-10-2018 IPR009078 Ferritin-like superfamily Amir_5922 ac9990778acb0c26c34bb70612471baa 119 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 113 30.088 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5922 ac9990778acb0c26c34bb70612471baa 119 PIRSF PIRSF002191 1 118 6.0E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5922 ac9990778acb0c26c34bb70612471baa 119 SUPERFAMILY SSF50104 1 114 6.62E-47 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Amir_5922 ac9990778acb0c26c34bb70612471baa 119 Gene3D G3DSA:2.30.30.790 3 115 3.6E-15 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5922 ac9990778acb0c26c34bb70612471baa 119 Pfam PF01245 Ribosomal protein L19 4 112 6.2E-50 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5922 ac9990778acb0c26c34bb70612471baa 119 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 2 112 4.6E-49 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5922 ac9990778acb0c26c34bb70612471baa 119 ProSitePatterns PS01015 Ribosomal protein L19 signature. 85 100 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_5922 ac9990778acb0c26c34bb70612471baa 119 PRINTS PR00061 Ribosomal protein L19 signature 3 32 1.1E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5922 ac9990778acb0c26c34bb70612471baa 119 PRINTS PR00061 Ribosomal protein L19 signature 33 62 1.1E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5922 ac9990778acb0c26c34bb70612471baa 119 PRINTS PR00061 Ribosomal protein L19 signature 87 112 1.1E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5190 7f20ddd2e19af2ae04ee96b71d99b6e7 379 TIGRFAM TIGR00534 OpcA: glucose-6-phosphate dehydrogenase assembly protein OpcA 2 303 3.2E-83 T 14-10-2018 IPR004555 Glucose-6-phosphate dehydrogenase assembly protein OpcA Amir_5190 7f20ddd2e19af2ae04ee96b71d99b6e7 379 Pfam PF10128 Glucose-6-phosphate dehydrogenase subunit 52 297 1.4E-93 T 14-10-2018 IPR004555 Glucose-6-phosphate dehydrogenase assembly protein OpcA Amir_5151 45b0dd7ae94cf0c9bc51f58ed4882310 257 SUPERFAMILY SSF52540 4 234 4.02E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5151 45b0dd7ae94cf0c9bc51f58ed4882310 257 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 246 2.6E-104 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 Amir_5151 45b0dd7ae94cf0c9bc51f58ed4882310 257 SMART SM00382 32 233 1.4E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5151 45b0dd7ae94cf0c9bc51f58ed4882310 257 Pfam PF00005 ABC transporter 23 174 1.7E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5151 45b0dd7ae94cf0c9bc51f58ed4882310 257 Gene3D G3DSA:3.40.50.300 1 251 9.8E-53 T 14-10-2018 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 SMART SM00957 3 381 1.3E-275 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 Pfam PF07517 SecA DEAD-like domain 6 380 1.1E-127 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 Pfam PF01043 SecA preprotein cross-linking domain 229 337 2.3E-35 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 ProSitePatterns PS01312 SecA family signature. 479 494 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 SUPERFAMILY SSF81886 614 834 6.02E-73 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Amir_6305 2a3617c972cdc363cb679f523bab0398 975 PRINTS PR00906 SecA protein signature 98 112 1.5E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 PRINTS PR00906 SecA protein signature 392 405 1.5E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 PRINTS PR00906 SecA protein signature 60 84 1.5E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 PRINTS PR00906 SecA protein signature 355 372 1.5E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 PRINTS PR00906 SecA protein signature 318 340 1.5E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 PRINTS PR00906 SecA protein signature 114 124 1.5E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 PRINTS PR00906 SecA protein signature 167 187 1.5E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 Gene3D G3DSA:3.90.1440.10 226 347 3.3E-178 T 14-10-2018 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 25 814 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 Gene3D G3DSA:1.10.3060.10 615 830 5.4E-76 T 14-10-2018 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 SUPERFAMILY SSF52540 8 394 1.03E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6305 2a3617c972cdc363cb679f523bab0398 975 Gene3D G3DSA:3.40.50.300 19 394 3.3E-178 T 14-10-2018 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 SUPERFAMILY SSF52540 395 612 2.49E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6305 2a3617c972cdc363cb679f523bab0398 975 Gene3D G3DSA:3.40.50.300 396 613 5.2E-91 T 14-10-2018 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 SUPERFAMILY SSF81767 224 347 3.53E-43 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 SMART SM00958 225 337 1.8E-61 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 Pfam PF07516 SecA Wing and Scaffold domain 611 826 3.7E-68 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Amir_6305 2a3617c972cdc363cb679f523bab0398 975 Hamap MF_01382 Protein translocase subunit SecA [secA]. 2 829 19.892 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amir_2218 c250bb4d44c1f58ac1f5c4db21278df2 93 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 16 92 4.5E-7 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 Amir_2218 c250bb4d44c1f58ac1f5c4db21278df2 93 SUPERFAMILY SSF101386 8 93 3.74E-21 T 14-10-2018 Amir_2218 c250bb4d44c1f58ac1f5c4db21278df2 93 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 7 93 18.344 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Amir_2218 c250bb4d44c1f58ac1f5c4db21278df2 93 Gene3D G3DSA:1.10.287.1080 2 93 3.9E-24 T 14-10-2018 Amir_2218 c250bb4d44c1f58ac1f5c4db21278df2 93 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 11 93 5.4E-23 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Amir_5017 840c969443882aec5d803a59ee7ebdaf 469 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 124 140 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site Amir_5017 840c969443882aec5d803a59ee7ebdaf 469 SMART SM00100 96 219 5.1E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_5017 840c969443882aec5d803a59ee7ebdaf 469 SUPERFAMILY SSF51206 86 207 3.14E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Amir_5017 840c969443882aec5d803a59ee7ebdaf 469 Pfam PF00027 Cyclic nucleotide-binding domain 116 203 1.2E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_5017 840c969443882aec5d803a59ee7ebdaf 469 Gene3D G3DSA:2.60.120.10 74 219 1.4E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_2568 85575b49894d1060f8f1f942613bc5ef 427 Gene3D G3DSA:3.40.50.150 266 426 1.9E-34 T 14-10-2018 Amir_2568 85575b49894d1060f8f1f942613bc5ef 427 SUPERFAMILY SSF53335 254 405 3.35E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_2568 85575b49894d1060f8f1f942613bc5ef 427 Pfam PF05401 Nodulation protein S (NodS) 258 380 5.4E-15 T 14-10-2018 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 Amir_2568 85575b49894d1060f8f1f942613bc5ef 427 Pfam PF02585 GlcNAc-PI de-N-acetylase 33 157 2.5E-25 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 Amir_2568 85575b49894d1060f8f1f942613bc5ef 427 Gene3D G3DSA:3.40.50.10320 27 238 1.0E-37 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Amir_2568 85575b49894d1060f8f1f942613bc5ef 427 SUPERFAMILY SSF102588 31 215 2.22E-42 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 435 28.723 T 14-10-2018 IPR026593 Protein translocase subunit SecY Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 PIRSF PIRSF004557 2 436 4.0E-118 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 Gene3D G3DSA:1.10.3370.10 1 431 2.6E-159 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 266 285 3.2E-103 T 14-10-2018 Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 71 91 3.2E-103 T 14-10-2018 Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 3.2E-103 T 14-10-2018 Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 112 135 3.2E-103 T 14-10-2018 Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 368 386 3.2E-103 T 14-10-2018 Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 3.2E-103 T 14-10-2018 Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 3.2E-103 T 14-10-2018 Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 313 335 3.2E-103 T 14-10-2018 Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 404 422 3.2E-103 T 14-10-2018 Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 Pfam PF00344 SecY translocase 72 419 2.6E-114 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 SUPERFAMILY SSF103491 3 426 1.7E-120 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 ProSitePatterns PS00755 Protein secY signature 1. 72 91 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amir_6594 ccecba8b8f55c7e06bd5040f400d7b4c 436 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 431 1.1E-131 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amir_0786 95123313dc6add826b20e93a23f972e9 260 SUPERFAMILY SSF52096 3 260 1.03E-83 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_0786 95123313dc6add826b20e93a23f972e9 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 259 1.0E-61 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Amir_0786 95123313dc6add826b20e93a23f972e9 260 Gene3D G3DSA:3.90.226.10 1 202 2.1E-70 T 14-10-2018 Amir_0786 95123313dc6add826b20e93a23f972e9 260 Gene3D G3DSA:1.10.12.10 204 260 1.9E-19 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Amir_1778 288956c2f0b20b3f85a25061ace89637 392 Gene3D G3DSA:3.40.1010.10 8 110 3.3E-17 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amir_1778 288956c2f0b20b3f85a25061ace89637 392 SUPERFAMILY SSF53790 11 187 1.7E-38 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amir_1778 288956c2f0b20b3f85a25061ace89637 392 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 13 183 7.1E-41 T 14-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 Amir_1778 288956c2f0b20b3f85a25061ace89637 392 PIRSF PIRSF036428 7 391 4.6E-130 T 14-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 Amir_1778 288956c2f0b20b3f85a25061ace89637 392 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 11 183 2.9E-18 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Amir_1778 288956c2f0b20b3f85a25061ace89637 392 Gene3D G3DSA:3.40.50.150 203 389 1.7E-69 T 14-10-2018 Amir_1778 288956c2f0b20b3f85a25061ace89637 392 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 219 341 4.4E-32 T 14-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 Amir_1778 288956c2f0b20b3f85a25061ace89637 392 SUPERFAMILY SSF53335 206 377 3.44E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_2549 558735b9358b4cd2794396987fef5ebc 318 SUPERFAMILY SSF55469 6 81 1.23E-9 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_2549 558735b9358b4cd2794396987fef5ebc 318 Pfam PF00881 Nitroreductase family 115 288 1.8E-5 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amir_2549 558735b9358b4cd2794396987fef5ebc 318 SUPERFAMILY SSF55469 112 316 2.22E-10 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_2549 558735b9358b4cd2794396987fef5ebc 318 Gene3D G3DSA:3.40.109.10 3 99 1.8E-31 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_2549 558735b9358b4cd2794396987fef5ebc 318 Gene3D G3DSA:3.40.109.10 102 317 5.5E-53 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_3400 761a03a0dcb0e5c748a6cafc2cac1ab4 248 Pfam PF00440 Bacterial regulatory proteins, tetR family 32 78 1.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3400 761a03a0dcb0e5c748a6cafc2cac1ab4 248 SUPERFAMILY SSF48498 93 244 3.0E-27 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3400 761a03a0dcb0e5c748a6cafc2cac1ab4 248 SUPERFAMILY SSF46689 22 83 6.67E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3400 761a03a0dcb0e5c748a6cafc2cac1ab4 248 Gene3D G3DSA:1.10.357.10 85 244 1.1E-39 T 14-10-2018 Amir_3400 761a03a0dcb0e5c748a6cafc2cac1ab4 248 Gene3D G3DSA:1.10.10.60 27 84 2.5E-26 T 14-10-2018 Amir_3400 761a03a0dcb0e5c748a6cafc2cac1ab4 248 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 89 241 1.4E-16 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SMART SM00086 454 495 0.0042 T 14-10-2018 IPR001610 PAC motif Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SMART SM00086 582 623 0.92 T 14-10-2018 IPR001610 PAC motif Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SMART SM00086 201 243 2.2E-6 T 14-10-2018 IPR001610 PAC motif Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SMART SM00086 327 369 120.0 T 14-10-2018 IPR001610 PAC motif Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 Gene3D G3DSA:3.30.450.20 124 192 3.4E-15 T 14-10-2018 Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 Gene3D G3DSA:3.30.450.20 377 446 8.2E-21 T 14-10-2018 Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SUPERFAMILY SSF141868 808 1053 3.27E-78 T 14-10-2018 IPR035919 EAL domain superfamily Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 Gene3D G3DSA:3.30.450.20 248 365 1.2E-9 T 14-10-2018 Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 Pfam PF08447 PAS fold 404 484 9.1E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 Pfam PF08447 PAS fold 151 236 4.3E-10 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SMART SM00052 803 1048 5.3E-89 T 14-10-2018 IPR001633 EAL domain Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SUPERFAMILY SSF55073 639 792 4.19E-38 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SUPERFAMILY SSF55785 492 621 1.34E-20 T 14-10-2018 IPR035965 PAS domain superfamily Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 Gene3D G3DSA:3.20.20.450 804 1055 2.2E-84 T 14-10-2018 IPR035919 EAL domain superfamily Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SUPERFAMILY SSF55785 366 493 9.07E-24 T 14-10-2018 IPR035965 PAS domain superfamily Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SMART SM00091 255 321 190.0 T 14-10-2018 IPR000014 PAS domain Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SMART SM00091 381 448 5.3E-5 T 14-10-2018 IPR000014 PAS domain Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SMART SM00091 127 195 4.0 T 14-10-2018 IPR000014 PAS domain Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SMART SM00091 19 89 19.0 T 14-10-2018 IPR000014 PAS domain Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SMART SM00091 507 573 4.0E-7 T 14-10-2018 IPR000014 PAS domain Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 Gene3D G3DSA:3.30.70.270 629 803 2.2E-47 T 14-10-2018 Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 Gene3D G3DSA:2.10.70.100 450 494 1.5E-9 T 14-10-2018 Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 Gene3D G3DSA:2.10.70.100 198 244 1.8E-11 T 14-10-2018 Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 Pfam PF08448 PAS fold 516 625 1.0E-10 T 14-10-2018 IPR013656 PAS fold-4 Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SUPERFAMILY SSF55785 112 241 2.27E-18 T 14-10-2018 IPR035965 PAS domain superfamily Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 124 250 1.3E-8 T 14-10-2018 IPR000014 PAS domain Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 385 500 1.1E-9 T 14-10-2018 IPR000014 PAS domain Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 504 630 8.7E-20 T 14-10-2018 IPR000014 PAS domain Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 Pfam PF00990 Diguanylate cyclase, GGDEF domain 634 787 5.6E-34 T 14-10-2018 IPR000160 GGDEF domain Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 630 792 2.5E-33 T 14-10-2018 IPR000160 GGDEF domain Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 Gene3D G3DSA:3.30.450.20 495 621 1.5E-19 T 14-10-2018 Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SMART SM00267 623 793 1.1E-50 T 14-10-2018 IPR000160 GGDEF domain Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 Pfam PF00563 EAL domain 809 1043 6.2E-65 T 14-10-2018 IPR001633 EAL domain Amir_6278 2ae1be1e64d2cf5d6d8056fc6680c90c 1064 SUPERFAMILY SSF55785 240 367 2.16E-7 T 14-10-2018 IPR035965 PAS domain superfamily Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 2.0E-31 T 14-10-2018 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 2.0E-31 T 14-10-2018 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.0E-31 T 14-10-2018 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 141 159 2.0E-31 T 14-10-2018 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 180 198 2.0E-31 T 14-10-2018 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 Gene3D G3DSA:3.50.50.60 156 274 1.6E-97 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 328 2.3E-54 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.5E-56 T 14-10-2018 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 153 1.5E-56 T 14-10-2018 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.5E-56 T 14-10-2018 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.5E-56 T 14-10-2018 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.5E-56 T 14-10-2018 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.5E-56 T 14-10-2018 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.5E-56 T 14-10-2018 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.5E-56 T 14-10-2018 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 205 1.5E-56 T 14-10-2018 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 SUPERFAMILY SSF51905 1 338 5.65E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 455 1.8E-25 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 Gene3D G3DSA:3.50.50.60 7 333 1.6E-97 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 SUPERFAMILY SSF55424 347 463 2.06E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 PIRSF PIRSF000350 1 468 1.8E-71 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Amir_5462 4a299dcce5ddb4131202aaf8b2b96483 471 Gene3D G3DSA:3.30.390.30 348 465 1.3E-28 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amir_1913 d67937dbbe9bb1c61cb6b8b89ef4ec9f 852 Pfam PF13549 ATP-grasp domain 629 834 8.5E-57 T 14-10-2018 Amir_1913 d67937dbbe9bb1c61cb6b8b89ef4ec9f 852 SUPERFAMILY SSF51735 162 293 1.47E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1913 d67937dbbe9bb1c61cb6b8b89ef4ec9f 852 SUPERFAMILY SSF52210 291 447 1.26E-35 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amir_1913 d67937dbbe9bb1c61cb6b8b89ef4ec9f 852 Gene3D G3DSA:3.30.1490.20 651 723 1.5E-56 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amir_1913 d67937dbbe9bb1c61cb6b8b89ef4ec9f 852 Gene3D G3DSA:3.40.50.720 165 292 7.5E-38 T 14-10-2018 Amir_1913 d67937dbbe9bb1c61cb6b8b89ef4ec9f 852 SUPERFAMILY SSF55729 19 134 7.15E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_1913 d67937dbbe9bb1c61cb6b8b89ef4ec9f 852 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 311 447 3.1E-46 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Amir_1913 d67937dbbe9bb1c61cb6b8b89ef4ec9f 852 Pfam PF00583 Acetyltransferase (GNAT) family 45 128 4.6E-8 T 14-10-2018 IPR000182 GNAT domain Amir_1913 d67937dbbe9bb1c61cb6b8b89ef4ec9f 852 Gene3D G3DSA:3.40.50.261 293 450 9.0E-48 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amir_1913 d67937dbbe9bb1c61cb6b8b89ef4ec9f 852 Gene3D G3DSA:3.30.470.20 633 832 1.5E-56 T 14-10-2018 Amir_1913 d67937dbbe9bb1c61cb6b8b89ef4ec9f 852 SMART SM00881 171 266 8.5E-35 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Amir_1913 d67937dbbe9bb1c61cb6b8b89ef4ec9f 852 SUPERFAMILY SSF52210 453 599 1.01E-28 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amir_1913 d67937dbbe9bb1c61cb6b8b89ef4ec9f 852 Gene3D G3DSA:3.40.630.30 9 164 1.7E-27 T 14-10-2018 Amir_1913 d67937dbbe9bb1c61cb6b8b89ef4ec9f 852 Gene3D G3DSA:3.40.50.261 451 599 1.3E-37 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amir_1913 d67937dbbe9bb1c61cb6b8b89ef4ec9f 852 Pfam PF13380 CoA binding domain 177 291 1.1E-23 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Amir_1913 d67937dbbe9bb1c61cb6b8b89ef4ec9f 852 SUPERFAMILY SSF56059 637 835 1.44E-30 T 14-10-2018 Amir_4421 e71502427b1d0ab3fc74312ffcf1db13 197 Gene3D G3DSA:1.10.10.10 2 144 7.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4421 e71502427b1d0ab3fc74312ffcf1db13 197 SUPERFAMILY SSF46785 6 142 4.67E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4421 e71502427b1d0ab3fc74312ffcf1db13 197 SMART SM00347 27 127 8.7E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4421 e71502427b1d0ab3fc74312ffcf1db13 197 Pfam PF12802 MarR family 32 93 1.3E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_1991 d2e7453493571d8732ac937dc54bcf48 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 143 191 9.8E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_1991 d2e7453493571d8732ac937dc54bcf48 219 Pfam PF00702 haloacid dehalogenase-like hydrolase 8 191 2.3E-10 T 14-10-2018 Amir_1991 d2e7453493571d8732ac937dc54bcf48 219 Gene3D G3DSA:3.40.50.1000 6 208 2.5E-27 T 14-10-2018 IPR023214 HAD superfamily Amir_1991 d2e7453493571d8732ac937dc54bcf48 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 5.9E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_1991 d2e7453493571d8732ac937dc54bcf48 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 162 5.9E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_1991 d2e7453493571d8732ac937dc54bcf48 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 116 129 5.9E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_1991 d2e7453493571d8732ac937dc54bcf48 219 SUPERFAMILY SSF56784 8 205 5.91E-30 T 14-10-2018 IPR036412 HAD-like superfamily Amir_6136 373c49d0fa5a944d12381e55edd8b9c8 478 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 144 357 3.2E-63 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amir_6136 373c49d0fa5a944d12381e55edd8b9c8 478 Gene3D G3DSA:3.40.50.300 90 359 4.1E-101 T 14-10-2018 Amir_6136 373c49d0fa5a944d12381e55edd8b9c8 478 SUPERFAMILY SSF52540 91 362 7.81E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6136 373c49d0fa5a944d12381e55edd8b9c8 478 SUPERFAMILY SSF50615 13 88 2.07E-22 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amir_6136 373c49d0fa5a944d12381e55edd8b9c8 478 Hamap MF_01347 ATP synthase subunit beta [atpB]. 11 475 54.4 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Amir_6136 373c49d0fa5a944d12381e55edd8b9c8 478 SUPERFAMILY SSF47917 360 475 9.68E-50 T 14-10-2018 Amir_6136 373c49d0fa5a944d12381e55edd8b9c8 478 Gene3D G3DSA:1.10.1140.10 360 478 1.7E-51 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amir_6136 373c49d0fa5a944d12381e55edd8b9c8 478 Gene3D G3DSA:2.40.10.170 4 89 7.7E-27 T 14-10-2018 Amir_6136 373c49d0fa5a944d12381e55edd8b9c8 478 SMART SM00382 156 419 5.5E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6136 373c49d0fa5a944d12381e55edd8b9c8 478 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 13 475 2.5E-242 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Amir_6136 373c49d0fa5a944d12381e55edd8b9c8 478 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 16 87 6.4E-21 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amir_4696 83a2d8aca3fdd80db0c524d305bcd4d5 390 SUPERFAMILY SSF47203 222 382 7.09E-22 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_4696 83a2d8aca3fdd80db0c524d305bcd4d5 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 211 1.3E-15 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amir_4696 83a2d8aca3fdd80db0c524d305bcd4d5 390 Gene3D G3DSA:2.40.110.10 125 222 1.4E-27 T 14-10-2018 Amir_4696 83a2d8aca3fdd80db0c524d305bcd4d5 390 Gene3D G3DSA:1.20.140.10 225 388 1.0E-20 T 14-10-2018 Amir_4696 83a2d8aca3fdd80db0c524d305bcd4d5 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 113 1.4E-13 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_4696 83a2d8aca3fdd80db0c524d305bcd4d5 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 224 380 3.3E-18 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_4696 83a2d8aca3fdd80db0c524d305bcd4d5 390 Gene3D G3DSA:1.10.540.10 4 114 7.2E-20 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_4696 83a2d8aca3fdd80db0c524d305bcd4d5 390 SUPERFAMILY SSF56645 6 222 1.06E-52 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_5712 458efd974689a7c22fd0ea428a7374a5 244 Gene3D G3DSA:3.20.20.70 1 244 7.1E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5712 458efd974689a7c22fd0ea428a7374a5 244 Pfam PF00977 Histidine biosynthesis protein 5 234 9.7E-65 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Amir_5712 458efd974689a7c22fd0ea428a7374a5 244 SUPERFAMILY SSF51366 3 240 1.14E-62 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Amir_5712 458efd974689a7c22fd0ea428a7374a5 244 TIGRFAM TIGR01919 hisA-trpF: bifunctional HisA/TrpF protein 2 243 4.3E-125 T 14-10-2018 IPR010188 Bifunctional HisA/TrpF GO:0000105|GO:0000162|GO:0003949|GO:0004640|GO:0005737 KEGG: 00340+5.3.1.16 Amir_5712 458efd974689a7c22fd0ea428a7374a5 244 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 241 32.689 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Amir_1972 8618c6975aa06a665cf3ab1ecab6b80b 203 SUPERFAMILY SSF46689 14 75 5.99E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_1972 8618c6975aa06a665cf3ab1ecab6b80b 203 Gene3D G3DSA:1.10.357.10 61 203 7.0E-11 T 14-10-2018 Amir_1972 8618c6975aa06a665cf3ab1ecab6b80b 203 Gene3D G3DSA:1.10.10.60 4 60 7.4E-15 T 14-10-2018 Amir_1972 8618c6975aa06a665cf3ab1ecab6b80b 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 63 5.0E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1972 8618c6975aa06a665cf3ab1ecab6b80b 203 SUPERFAMILY SSF48498 83 203 3.68E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_1972 8618c6975aa06a665cf3ab1ecab6b80b 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 7.8E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1972 8618c6975aa06a665cf3ab1ecab6b80b 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 7.8E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6140 239e67a4dd23bb95bcef67f52eb47f00 182 Hamap MF_01398 ATP synthase subunit b [atpF]. 16 154 12.061 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Amir_6140 239e67a4dd23bb95bcef67f52eb47f00 182 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 29 173 1.5E-25 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 Amir_6140 239e67a4dd23bb95bcef67f52eb47f00 182 SUPERFAMILY SSF81573 78 137 1.28E-13 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Amir_6140 239e67a4dd23bb95bcef67f52eb47f00 182 Gene3D G3DSA:1.20.5.620 78 138 3.1E-10 T 14-10-2018 Amir_6140 239e67a4dd23bb95bcef67f52eb47f00 182 Pfam PF00430 ATP synthase B/B' CF(0) 23 152 8.1E-28 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Amir_1454 2b509b0b8c76b13f3a3731c65f836e55 174 Pfam PF11706 CGNR zinc finger 133 171 1.3E-8 T 14-10-2018 IPR021005 Zinc finger, CGNR Amir_1454 2b509b0b8c76b13f3a3731c65f836e55 174 SUPERFAMILY SSF160904 3 171 2.09E-30 T 14-10-2018 Amir_1454 2b509b0b8c76b13f3a3731c65f836e55 174 Gene3D G3DSA:1.10.3300.10 3 173 4.7E-17 T 14-10-2018 IPR023286 ABATE domain superfamily Amir_1454 2b509b0b8c76b13f3a3731c65f836e55 174 Pfam PF07336 Putative stress-induced transcription regulator 2 128 1.1E-15 T 14-10-2018 IPR010852 Putative stress-induced transcription regulator Amir_5239 ec1ed7e7fbe6eec3496fd589048c59e9 105 PIRSF PIRSF002134 40 104 1.2E-5 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_5239 ec1ed7e7fbe6eec3496fd589048c59e9 105 SUPERFAMILY SSF46946 54 103 4.71E-7 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Amir_5239 ec1ed7e7fbe6eec3496fd589048c59e9 105 Gene3D G3DSA:1.10.8.50 1 105 2.4E-44 T 14-10-2018 Amir_3004 23c7fdb2be6d8649c4870d116931547b 223 Pfam PF00072 Response regulator receiver domain 5 119 6.8E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3004 23c7fdb2be6d8649c4870d116931547b 223 SUPERFAMILY SSF52172 3 187 1.04E-30 T 14-10-2018 IPR011006 CheY-like superfamily Amir_3004 23c7fdb2be6d8649c4870d116931547b 223 SMART SM00421 156 213 1.7E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3004 23c7fdb2be6d8649c4870d116931547b 223 SMART SM00448 3 118 1.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3004 23c7fdb2be6d8649c4870d116931547b 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 4.9E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3004 23c7fdb2be6d8649c4870d116931547b 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 3.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3004 23c7fdb2be6d8649c4870d116931547b 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 3.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3004 23c7fdb2be6d8649c4870d116931547b 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 3.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3004 23c7fdb2be6d8649c4870d116931547b 223 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3004 23c7fdb2be6d8649c4870d116931547b 223 Gene3D G3DSA:3.40.50.12740 3 219 1.0E-61 T 14-10-2018 Amir_2342 4bb8b6bbdb2d57b105da0b17555654e0 327 SUPERFAMILY SSF53955 192 323 1.84E-42 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Amir_2342 4bb8b6bbdb2d57b105da0b17555654e0 327 Pfam PF00877 NlpC/P60 family 74 162 3.7E-23 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Amir_2342 4bb8b6bbdb2d57b105da0b17555654e0 327 SUPERFAMILY SSF54001 59 173 1.81E-37 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amir_2342 4bb8b6bbdb2d57b105da0b17555654e0 327 Gene3D G3DSA:1.10.530.10 199 325 3.2E-38 T 14-10-2018 Amir_2342 4bb8b6bbdb2d57b105da0b17555654e0 327 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 223 251 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Amir_2342 4bb8b6bbdb2d57b105da0b17555654e0 327 Gene3D G3DSA:3.90.1720.10 22 176 3.7E-47 T 14-10-2018 Amir_2342 4bb8b6bbdb2d57b105da0b17555654e0 327 Pfam PF01464 Transglycosylase SLT domain 205 311 6.7E-28 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 Amir_2259 b5677ec899e5dcda38de84928eb17ae3 149 SUPERFAMILY SSF46785 3 70 2.69E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2259 b5677ec899e5dcda38de84928eb17ae3 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Amir_2259 b5677ec899e5dcda38de84928eb17ae3 149 SUPERFAMILY SSF54909 64 146 7.51E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_2259 b5677ec899e5dcda38de84928eb17ae3 149 SMART SM00344 4 111 2.7E-36 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Amir_2259 b5677ec899e5dcda38de84928eb17ae3 149 Gene3D G3DSA:3.30.70.920 57 137 2.1E-19 T 14-10-2018 Amir_2259 b5677ec899e5dcda38de84928eb17ae3 149 Gene3D G3DSA:1.10.10.10 5 56 7.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2259 b5677ec899e5dcda38de84928eb17ae3 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.6E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_2259 b5677ec899e5dcda38de84928eb17ae3 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.6E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_2259 b5677ec899e5dcda38de84928eb17ae3 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.6E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_2259 b5677ec899e5dcda38de84928eb17ae3 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 51 1.3E-17 T 14-10-2018 Amir_2259 b5677ec899e5dcda38de84928eb17ae3 149 Pfam PF01037 Lrp/AsnC ligand binding domain 71 140 1.6E-13 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Amir_6099 4e08944e6947b24f450a0d33e5912087 525 SUPERFAMILY SSF55781 152 311 6.76E-17 T 14-10-2018 Amir_6099 4e08944e6947b24f450a0d33e5912087 525 SMART SM00065 187 320 0.0092 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_6099 4e08944e6947b24f450a0d33e5912087 525 SMART SM00065 22 166 1.2E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_6099 4e08944e6947b24f450a0d33e5912087 525 Gene3D G3DSA:3.30.565.10 396 523 2.5E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6099 4e08944e6947b24f450a0d33e5912087 525 Pfam PF07730 Histidine kinase 328 390 7.1E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_6099 4e08944e6947b24f450a0d33e5912087 525 SUPERFAMILY SSF55781 34 182 1.9E-24 T 14-10-2018 Amir_6099 4e08944e6947b24f450a0d33e5912087 525 Pfam PF01590 GAF domain 109 156 1.3E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_6099 4e08944e6947b24f450a0d33e5912087 525 Pfam PF13492 GAF domain 225 311 2.1E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_6099 4e08944e6947b24f450a0d33e5912087 525 SMART SM00387 430 524 4.8E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_6099 4e08944e6947b24f450a0d33e5912087 525 Gene3D G3DSA:3.30.450.40 188 327 1.5E-21 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_6099 4e08944e6947b24f450a0d33e5912087 525 Gene3D G3DSA:3.30.450.40 89 166 2.7E-19 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_6099 4e08944e6947b24f450a0d33e5912087 525 SUPERFAMILY SSF55874 391 522 3.27E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2835 5795a314b7e1c4bab5d17cb214612343 291 SUPERFAMILY SSF55486 149 284 1.59E-7 T 14-10-2018 Amir_6223 aeab320a747dd729d1c4f924e46c3587 702 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 263 419 7.2E-23 T 14-10-2018 IPR000160 GGDEF domain Amir_6223 aeab320a747dd729d1c4f924e46c3587 702 Gene3D G3DSA:3.20.20.450 436 691 1.1E-52 T 14-10-2018 IPR035919 EAL domain superfamily Amir_6223 aeab320a747dd729d1c4f924e46c3587 702 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 136 258 1.1E-22 T 14-10-2018 IPR000014 PAS domain Amir_6223 aeab320a747dd729d1c4f924e46c3587 702 SMART SM00267 254 423 2.8E-29 T 14-10-2018 IPR000160 GGDEF domain Amir_6223 aeab320a747dd729d1c4f924e46c3587 702 SMART SM00086 212 254 2.7E-6 T 14-10-2018 IPR001610 PAC motif Amir_6223 aeab320a747dd729d1c4f924e46c3587 702 Pfam PF08448 PAS fold 148 255 2.0E-10 T 14-10-2018 IPR013656 PAS fold-4 Amir_6223 aeab320a747dd729d1c4f924e46c3587 702 Gene3D G3DSA:3.30.450.20 127 251 4.1E-19 T 14-10-2018 Amir_6223 aeab320a747dd729d1c4f924e46c3587 702 Pfam PF00563 EAL domain 446 675 5.1E-43 T 14-10-2018 IPR001633 EAL domain Amir_6223 aeab320a747dd729d1c4f924e46c3587 702 SUPERFAMILY SSF55073 270 425 8.63E-32 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_6223 aeab320a747dd729d1c4f924e46c3587 702 SMART SM00052 433 683 4.9E-25 T 14-10-2018 IPR001633 EAL domain Amir_6223 aeab320a747dd729d1c4f924e46c3587 702 SMART SM00091 139 205 1.4E-5 T 14-10-2018 IPR000014 PAS domain Amir_6223 aeab320a747dd729d1c4f924e46c3587 702 Pfam PF00990 Diguanylate cyclase, GGDEF domain 267 417 7.5E-24 T 14-10-2018 IPR000160 GGDEF domain Amir_6223 aeab320a747dd729d1c4f924e46c3587 702 Gene3D G3DSA:3.30.70.270 260 435 6.1E-34 T 14-10-2018 Amir_6223 aeab320a747dd729d1c4f924e46c3587 702 SUPERFAMILY SSF141868 445 675 4.45E-44 T 14-10-2018 IPR035919 EAL domain superfamily Amir_6223 aeab320a747dd729d1c4f924e46c3587 702 SUPERFAMILY SSF55785 131 250 1.27E-20 T 14-10-2018 IPR035965 PAS domain superfamily Amir_3445 06f0348d1382a610a3f651ddc817e927 262 Gene3D G3DSA:3.30.420.10 10 194 1.1E-34 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amir_3445 06f0348d1382a610a3f651ddc817e927 262 SMART SM00479 14 194 3.6E-13 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Amir_3445 06f0348d1382a610a3f651ddc817e927 262 SUPERFAMILY SSF53098 10 207 4.83E-42 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_3445 06f0348d1382a610a3f651ddc817e927 262 Pfam PF00929 Exonuclease 17 184 2.1E-10 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Amir_5842 184aca8410b453c5fc0f744b83868752 262 Gene3D G3DSA:3.40.50.720 7 262 1.6E-56 T 14-10-2018 Amir_5842 184aca8410b453c5fc0f744b83868752 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 204 4.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5842 184aca8410b453c5fc0f744b83868752 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5842 184aca8410b453c5fc0f744b83868752 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 110 4.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5842 184aca8410b453c5fc0f744b83868752 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 249 4.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5842 184aca8410b453c5fc0f744b83868752 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 176 4.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5842 184aca8410b453c5fc0f744b83868752 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 223 4.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5842 184aca8410b453c5fc0f744b83868752 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 54 259 1.7E-29 T 14-10-2018 Amir_5842 184aca8410b453c5fc0f744b83868752 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 204 1.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5842 184aca8410b453c5fc0f744b83868752 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 99 110 1.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5842 184aca8410b453c5fc0f744b83868752 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 174 1.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5842 184aca8410b453c5fc0f744b83868752 262 SUPERFAMILY SSF51735 8 259 1.92E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4100 12af1f97c54793527bddb90229f2c2c1 515 Pfam PF00732 GMC oxidoreductase 6 296 4.2E-63 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Amir_4100 12af1f97c54793527bddb90229f2c2c1 515 SUPERFAMILY SSF51905 1 513 1.4E-64 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4100 12af1f97c54793527bddb90229f2c2c1 515 Gene3D G3DSA:3.50.50.60 5 510 1.7E-148 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4100 12af1f97c54793527bddb90229f2c2c1 515 Pfam PF05199 GMC oxidoreductase 369 508 7.7E-35 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Amir_4100 12af1f97c54793527bddb90229f2c2c1 515 PIRSF PIRSF000137 309 515 9.6E-39 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Amir_4100 12af1f97c54793527bddb90229f2c2c1 515 PIRSF PIRSF000137 1 324 2.5E-64 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Amir_4100 12af1f97c54793527bddb90229f2c2c1 515 SUPERFAMILY SSF54373 326 456 2.85E-19 T 14-10-2018 Amir_4100 12af1f97c54793527bddb90229f2c2c1 515 Gene3D G3DSA:3.30.410.40 148 450 1.7E-148 T 14-10-2018 Amir_4100 12af1f97c54793527bddb90229f2c2c1 515 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 256 270 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Amir_0660 c89db143012c3d4804e5af35863d581f 329 PRINTS PR00075 Fatty acid desaturase family 1 signature 81 101 3.5E-7 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Amir_0660 c89db143012c3d4804e5af35863d581f 329 PRINTS PR00075 Fatty acid desaturase family 1 signature 118 147 3.5E-7 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Amir_0660 c89db143012c3d4804e5af35863d581f 329 PRINTS PR00075 Fatty acid desaturase family 1 signature 58 80 3.5E-7 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Amir_0660 c89db143012c3d4804e5af35863d581f 329 Pfam PF00487 Fatty acid desaturase 59 277 1.3E-19 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 Amir_5749 6f6714fcc1812003ab4e0fa4cb25d55a 492 Pfam PF00999 Sodium/hydrogen exchanger family 14 380 4.5E-44 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Amir_5749 6f6714fcc1812003ab4e0fa4cb25d55a 492 Gene3D G3DSA:3.30.70.1450 398 474 3.8E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amir_5749 6f6714fcc1812003ab4e0fa4cb25d55a 492 SUPERFAMILY SSF116726 401 471 2.35E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amir_5749 6f6714fcc1812003ab4e0fa4cb25d55a 492 Pfam PF02080 TrkA-C domain 408 470 1.1E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Amir_5749 6f6714fcc1812003ab4e0fa4cb25d55a 492 Gene3D G3DSA:1.20.1530.20 7 386 4.1E-19 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Amir_2671 75691668e2cc114f34227c504ceb8043 671 Gene3D G3DSA:1.10.10.10 337 429 8.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2671 75691668e2cc114f34227c504ceb8043 671 Pfam PF16864 Dimerisation domain 354 427 1.1E-8 T 14-10-2018 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain Amir_2671 75691668e2cc114f34227c504ceb8043 671 SUPERFAMILY SSF53335 442 665 2.32E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_2671 75691668e2cc114f34227c504ceb8043 671 SUPERFAMILY SSF46785 352 432 2.22E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2671 75691668e2cc114f34227c504ceb8043 671 Pfam PF00891 O-methyltransferase 444 655 1.9E-37 T 14-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 Amir_2671 75691668e2cc114f34227c504ceb8043 671 Gene3D G3DSA:3.40.50.150 431 671 5.2E-62 T 14-10-2018 Amir_4286 e1591322e562a0ba5b48c4d4254aa6f5 118 SUPERFAMILY SSF46785 14 104 2.91E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4286 e1591322e562a0ba5b48c4d4254aa6f5 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 44 8.0E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_4286 e1591322e562a0ba5b48c4d4254aa6f5 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 76 91 8.0E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_4286 e1591322e562a0ba5b48c4d4254aa6f5 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 8.0E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_4286 e1591322e562a0ba5b48c4d4254aa6f5 118 Gene3D G3DSA:1.10.10.10 6 118 2.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4286 e1591322e562a0ba5b48c4d4254aa6f5 118 Pfam PF01022 Bacterial regulatory protein, arsR family 34 79 1.1E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_4286 e1591322e562a0ba5b48c4d4254aa6f5 118 SMART SM00418 27 105 1.6E-23 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 Gene3D G3DSA:3.50.50.60 155 273 2.2E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 PIRSF PIRSF000350 1 457 3.6E-80 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.8E-54 T 14-10-2018 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.8E-54 T 14-10-2018 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 205 2.8E-54 T 14-10-2018 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 2.8E-54 T 14-10-2018 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 2.8E-54 T 14-10-2018 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 2.8E-54 T 14-10-2018 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 153 2.8E-54 T 14-10-2018 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 2.8E-54 T 14-10-2018 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.8E-54 T 14-10-2018 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 456 1.7E-23 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 180 198 9.4E-37 T 14-10-2018 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 141 159 9.4E-37 T 14-10-2018 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 9.4E-37 T 14-10-2018 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 9.4E-37 T 14-10-2018 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 9.4E-37 T 14-10-2018 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 SUPERFAMILY SSF51905 3 337 4.8E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 SUPERFAMILY SSF55424 347 461 1.53E-27 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 Gene3D G3DSA:3.30.390.30 341 462 6.8E-36 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 Gene3D G3DSA:3.50.50.60 4 331 2.2E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6404 3b3b50dbccd5c6afce6fc4fe9a044bf9 467 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 1.8E-63 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_2073 e634343bdff79be0ebf134969ce62d42 286 SUPERFAMILY SSF48179 189 285 1.79E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_2073 e634343bdff79be0ebf134969ce62d42 286 Gene3D G3DSA:1.10.1040.10 192 286 2.2E-30 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amir_2073 e634343bdff79be0ebf134969ce62d42 286 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 186 1.4E-59 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amir_2073 e634343bdff79be0ebf134969ce62d42 286 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 189 285 2.7E-29 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amir_2073 e634343bdff79be0ebf134969ce62d42 286 SUPERFAMILY SSF51735 4 186 3.48E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2073 e634343bdff79be0ebf134969ce62d42 286 Gene3D G3DSA:3.40.50.720 2 191 2.7E-61 T 14-10-2018 Amir_2073 e634343bdff79be0ebf134969ce62d42 286 PIRSF PIRSF000105 2 286 4.4E-79 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 Amir_1486 4bf9d2763f795ab5b88b2932297af7f4 260 Gene3D G3DSA:3.30.450.40 85 258 6.0E-48 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_1486 4bf9d2763f795ab5b88b2932297af7f4 260 SUPERFAMILY SSF55781 80 255 3.73E-44 T 14-10-2018 Amir_1486 4bf9d2763f795ab5b88b2932297af7f4 260 SUPERFAMILY SSF46785 13 86 2.15E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1486 4bf9d2763f795ab5b88b2932297af7f4 260 SMART SM00346 13 103 3.6E-18 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_1486 4bf9d2763f795ab5b88b2932297af7f4 260 Pfam PF01614 Bacterial transcriptional regulator 131 252 2.3E-25 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Amir_1486 4bf9d2763f795ab5b88b2932297af7f4 260 Pfam PF09339 IclR helix-turn-helix domain 15 65 5.6E-15 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_1486 4bf9d2763f795ab5b88b2932297af7f4 260 Gene3D G3DSA:1.10.10.10 11 84 1.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2231 a38e5a5ea8bd0dd80a48251555fe8b06 599 Gene3D G3DSA:2.40.50.140 97 156 2.0E-28 T 14-10-2018 Amir_2231 a38e5a5ea8bd0dd80a48251555fe8b06 599 Gene3D G3DSA:2.40.50.140 157 237 5.6E-25 T 14-10-2018 Amir_2231 a38e5a5ea8bd0dd80a48251555fe8b06 599 ProSitePatterns PS00674 AAA-protein family signature. 399 417 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Amir_2231 a38e5a5ea8bd0dd80a48251555fe8b06 599 Gene3D G3DSA:1.10.8.60 430 454 5.0E-62 T 14-10-2018 Amir_2231 a38e5a5ea8bd0dd80a48251555fe8b06 599 SUPERFAMILY SSF52540 237 545 2.87E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2231 a38e5a5ea8bd0dd80a48251555fe8b06 599 Gene3D G3DSA:1.20.5.170 55 96 2.4E-16 T 14-10-2018 Amir_2231 a38e5a5ea8bd0dd80a48251555fe8b06 599 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 279 429 5.9E-48 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amir_2231 a38e5a5ea8bd0dd80a48251555fe8b06 599 SMART SM00382 275 431 4.2E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2231 a38e5a5ea8bd0dd80a48251555fe8b06 599 Hamap MF_02112 Proteasome-associated ATPase [mpa]. 58 578 50.559 T 14-10-2018 IPR022482 Proteasome ATPase GO:0000502|GO:0010498|GO:0016887|GO:0019941 Amir_2231 a38e5a5ea8bd0dd80a48251555fe8b06 599 Gene3D G3DSA:3.40.50.300 238 429 5.0E-62 T 14-10-2018 Amir_2231 a38e5a5ea8bd0dd80a48251555fe8b06 599 Pfam PF16450 Proteasomal ATPase OB/ID domain 100 236 4.5E-54 T 14-10-2018 IPR032501 Proteasomal ATPase, OB/ID domain Amir_2231 a38e5a5ea8bd0dd80a48251555fe8b06 599 TIGRFAM TIGR03689 pup_AAA: proteasome ATPase 56 577 2.4E-254 T 14-10-2018 IPR022482 Proteasome ATPase GO:0000502|GO:0010498|GO:0016887|GO:0019941 Amir_1476 9250a510794cadde12d6a48213950fa2 267 PIRSF PIRSF006648 2 266 2.5E-68 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_1476 9250a510794cadde12d6a48213950fa2 267 Pfam PF01061 ABC-2 type transporter 13 219 1.8E-24 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Amir_1061 f056457a223e909d43cbf8d5262cb5a0 149 SUPERFAMILY SSF55804 2 143 1.06E-34 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Amir_1061 f056457a223e909d43cbf8d5262cb5a0 149 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 144 2.3E-32 T 14-10-2018 IPR002178 PTS EIIA type-2 domain Amir_1061 f056457a223e909d43cbf8d5262cb5a0 149 Gene3D G3DSA:3.40.930.10 1 145 1.4E-39 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Amir_1061 f056457a223e909d43cbf8d5262cb5a0 149 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 130 1.7E-33 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 Amir_1845 dd95a01b3f5e05459ad09529ba0dd87a 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 288 1.3E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_1845 dd95a01b3f5e05459ad09529ba0dd87a 295 Gene3D G3DSA:1.10.3720.10 26 282 1.3E-60 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1845 dd95a01b3f5e05459ad09529ba0dd87a 295 SUPERFAMILY SSF161098 30 295 3.27E-69 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0411 31658e7771a03f6d6089348ce76d6c74 139 SUPERFAMILY SSF46785 10 138 2.53E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0411 31658e7771a03f6d6089348ce76d6c74 139 Pfam PF01047 MarR family 35 87 3.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0411 31658e7771a03f6d6089348ce76d6c74 139 Gene3D G3DSA:1.10.10.10 1 135 1.0E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0411 31658e7771a03f6d6089348ce76d6c74 139 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Amir_0411 31658e7771a03f6d6089348ce76d6c74 139 SMART SM00347 23 123 3.4E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0754 3fe16e992228892cf17245e9f2332c44 427 SMART SM00388 211 276 3.7E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_0754 3fe16e992228892cf17245e9f2332c44 427 SUPERFAMILY SSF47384 194 277 2.75E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_0754 3fe16e992228892cf17245e9f2332c44 427 Gene3D G3DSA:1.10.287.130 164 277 7.9E-21 T 14-10-2018 Amir_0754 3fe16e992228892cf17245e9f2332c44 427 Gene3D G3DSA:3.30.565.10 281 427 8.7E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0754 3fe16e992228892cf17245e9f2332c44 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_0754 3fe16e992228892cf17245e9f2332c44 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_0754 3fe16e992228892cf17245e9f2332c44 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_0754 3fe16e992228892cf17245e9f2332c44 427 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 424 1.9E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0754 3fe16e992228892cf17245e9f2332c44 427 Pfam PF00512 His Kinase A (phospho-acceptor) domain 212 276 4.4E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_0754 3fe16e992228892cf17245e9f2332c44 427 SMART SM00387 317 427 5.3E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0754 3fe16e992228892cf17245e9f2332c44 427 SUPERFAMILY SSF55874 267 425 1.11E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4351 15ab282c271982b2e612fb88ea11aecf 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 226 1.1E-12 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4351 15ab282c271982b2e612fb88ea11aecf 229 SUPERFAMILY SSF52172 8 135 1.57E-35 T 14-10-2018 IPR011006 CheY-like superfamily Amir_4351 15ab282c271982b2e612fb88ea11aecf 229 SMART SM00448 13 124 6.0E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4351 15ab282c271982b2e612fb88ea11aecf 229 SUPERFAMILY SSF46894 137 226 2.27E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4351 15ab282c271982b2e612fb88ea11aecf 229 Gene3D G3DSA:1.10.10.10 133 228 7.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4351 15ab282c271982b2e612fb88ea11aecf 229 SMART SM00862 157 226 1.9E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4351 15ab282c271982b2e612fb88ea11aecf 229 Gene3D G3DSA:3.40.50.2300 2 132 5.7E-38 T 14-10-2018 Amir_4351 15ab282c271982b2e612fb88ea11aecf 229 Pfam PF00072 Response regulator receiver domain 16 124 1.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6683 e2641bc735c8a526b227b7ffa3aa0d4c 426 Gene3D G3DSA:3.50.50.60 9 423 5.4E-100 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6683 e2641bc735c8a526b227b7ffa3aa0d4c 426 Pfam PF01494 FAD binding domain 13 183 1.4E-16 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_6683 e2641bc735c8a526b227b7ffa3aa0d4c 426 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 15 332 5.5E-74 T 14-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 Amir_6683 e2641bc735c8a526b227b7ffa3aa0d4c 426 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 162 177 6.3E-14 T 14-10-2018 Amir_6683 e2641bc735c8a526b227b7ffa3aa0d4c 426 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 312 6.3E-14 T 14-10-2018 Amir_6683 e2641bc735c8a526b227b7ffa3aa0d4c 426 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 312 328 6.3E-14 T 14-10-2018 Amir_6683 e2641bc735c8a526b227b7ffa3aa0d4c 426 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 14 36 6.3E-14 T 14-10-2018 Amir_6683 e2641bc735c8a526b227b7ffa3aa0d4c 426 SUPERFAMILY SSF51905 10 385 4.58E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1701 8eae2d2f80bb51e161c31df497598524 421 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 407 2.4E-134 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Amir_1701 8eae2d2f80bb51e161c31df497598524 421 SUPERFAMILY SSF55681 7 313 8.23E-87 T 14-10-2018 Amir_1701 8eae2d2f80bb51e161c31df497598524 421 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 417 30.851 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Amir_1701 8eae2d2f80bb51e161c31df497598524 421 Gene3D G3DSA:3.40.50.800 325 417 8.3E-22 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Amir_1701 8eae2d2f80bb51e161c31df497598524 421 PIRSF PIRSF001549 2 419 8.5E-107 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Amir_1701 8eae2d2f80bb51e161c31df497598524 421 Pfam PF03129 Anticodon binding domain 329 416 1.8E-12 T 14-10-2018 IPR004154 Anticodon-binding Amir_1701 8eae2d2f80bb51e161c31df497598524 421 Pfam PF13393 Histidyl-tRNA synthetase 10 309 8.5E-45 T 14-10-2018 Amir_1701 8eae2d2f80bb51e161c31df497598524 421 Gene3D G3DSA:3.30.930.10 4 321 6.5E-99 T 14-10-2018 Amir_1701 8eae2d2f80bb51e161c31df497598524 421 SUPERFAMILY SSF52954 325 418 6.87E-22 T 14-10-2018 Amir_2179 51dae56213c5d6ccde3acf60034a9490 894 SUPERFAMILY SSF55103 235 468 2.29E-47 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Amir_2179 51dae56213c5d6ccde3acf60034a9490 894 SUPERFAMILY SSF56176 2 232 4.49E-57 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amir_2179 51dae56213c5d6ccde3acf60034a9490 894 SUPERFAMILY SSF46548 452 583 2.88E-8 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amir_2179 51dae56213c5d6ccde3acf60034a9490 894 Gene3D G3DSA:3.30.465.40 2 240 1.3E-50 T 14-10-2018 Amir_2179 51dae56213c5d6ccde3acf60034a9490 894 Gene3D G3DSA:3.30.70.2740 345 425 4.4E-8 T 14-10-2018 Amir_2179 51dae56213c5d6ccde3acf60034a9490 894 Pfam PF02913 FAD linked oxidases, C-terminal domain 232 465 2.7E-41 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Amir_2179 51dae56213c5d6ccde3acf60034a9490 894 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 566 577 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amir_2179 51dae56213c5d6ccde3acf60034a9490 894 Gene3D G3DSA:1.10.45.10 426 466 2.9E-8 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Amir_2179 51dae56213c5d6ccde3acf60034a9490 894 Pfam PF02754 Cysteine-rich domain 670 742 0.0017 T 14-10-2018 IPR004017 Cysteine-rich domain Amir_2179 51dae56213c5d6ccde3acf60034a9490 894 Pfam PF13183 4Fe-4S dicluster domain 504 580 1.5E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amir_2179 51dae56213c5d6ccde3acf60034a9490 894 Pfam PF01565 FAD binding domain 36 172 7.7E-39 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Amir_3461 ed9de99c07d78d4b51ec6cf74da08744 402 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 235 1.6E-21 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amir_3461 ed9de99c07d78d4b51ec6cf74da08744 402 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 247 397 1.8E-35 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_3461 ed9de99c07d78d4b51ec6cf74da08744 402 Gene3D G3DSA:2.40.110.10 132 247 4.3E-50 T 14-10-2018 Amir_3461 ed9de99c07d78d4b51ec6cf74da08744 402 SUPERFAMILY SSF47203 245 401 4.67E-44 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_3461 ed9de99c07d78d4b51ec6cf74da08744 402 Gene3D G3DSA:1.20.140.10 248 402 1.1E-40 T 14-10-2018 Amir_3461 ed9de99c07d78d4b51ec6cf74da08744 402 Gene3D G3DSA:1.10.540.10 1 131 7.9E-46 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_3461 ed9de99c07d78d4b51ec6cf74da08744 402 SUPERFAMILY SSF56645 2 260 5.24E-63 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_3461 ed9de99c07d78d4b51ec6cf74da08744 402 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 128 8.1E-11 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_3112 3d563cab569918d6e23271fac0a9450c 318 Gene3D G3DSA:3.40.50.10140 13 140 1.5E-17 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily Amir_3112 3d563cab569918d6e23271fac0a9450c 318 Pfam PF13676 TIR domain 39 110 3.4E-10 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 Amir_3112 3d563cab569918d6e23271fac0a9450c 318 SMART SM00255 18 174 0.0058 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 Amir_3112 3d563cab569918d6e23271fac0a9450c 318 SUPERFAMILY SSF52200 14 125 1.31E-15 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily Amir_2783 fd5628e35b4353025664d0e4ce698aca 302 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 35 48 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Amir_2783 fd5628e35b4353025664d0e4ce698aca 302 SUPERFAMILY SSF53686 6 300 2.1E-72 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amir_2783 fd5628e35b4353025664d0e4ce698aca 302 Gene3D G3DSA:3.40.50.1100 43 138 1.0E-86 T 14-10-2018 Amir_2783 fd5628e35b4353025664d0e4ce698aca 302 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 293 4.6E-68 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amir_2783 fd5628e35b4353025664d0e4ce698aca 302 Gene3D G3DSA:3.40.50.1100 7 297 1.0E-86 T 14-10-2018 Amir_4444 62d3c60b24774c4a9da3f74342b00318 438 Gene3D G3DSA:1.10.10.2840 293 419 7.7E-17 T 14-10-2018 Amir_4444 62d3c60b24774c4a9da3f74342b00318 438 Pfam PF13556 PucR C-terminal helix-turn-helix domain 359 414 2.8E-13 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Amir_0731 65c7afeeb77594217dd7e1cdddeada02 313 Pfam PF02646 RmuC family 33 263 2.2E-40 T 14-10-2018 IPR003798 DNA recombination RmuC Amir_0358 dd96a34d77f393f1dc42c2a3a5d5cde5 476 PIRSF PIRSF500217 1 476 3.2E-149 T 14-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 Amir_0358 dd96a34d77f393f1dc42c2a3a5d5cde5 476 PIRSF PIRSF016636 1 476 2.2E-147 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB Amir_0358 dd96a34d77f393f1dc42c2a3a5d5cde5 476 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 152 346 5.5E-29 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT Amir_1419 d2e0798d1056c6fabbaeda5cf7c782e6 347 Gene3D G3DSA:3.40.50.300 29 270 1.5E-82 T 14-10-2018 Amir_1419 d2e0798d1056c6fabbaeda5cf7c782e6 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 7 327 1.4E-174 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amir_1419 d2e0798d1056c6fabbaeda5cf7c782e6 347 Gene3D G3DSA:3.30.250.10 271 347 2.3E-33 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Amir_1419 d2e0798d1056c6fabbaeda5cf7c782e6 347 SMART SM00382 60 231 2.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1419 d2e0798d1056c6fabbaeda5cf7c782e6 347 SUPERFAMILY SSF52540 7 270 9.41E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1419 d2e0798d1056c6fabbaeda5cf7c782e6 347 Pfam PF00154 recA bacterial DNA recombination protein 10 271 7.4E-143 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amir_1419 d2e0798d1056c6fabbaeda5cf7c782e6 347 Hamap MF_00268 Protein RecA [recA]. 8 332 52.986 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amir_1419 d2e0798d1056c6fabbaeda5cf7c782e6 347 SUPERFAMILY SSF54752 271 329 2.62E-21 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Amir_1419 d2e0798d1056c6fabbaeda5cf7c782e6 347 PRINTS PR00142 RecA protein signature 300 317 8.4E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amir_1419 d2e0798d1056c6fabbaeda5cf7c782e6 347 PRINTS PR00142 RecA protein signature 130 159 8.4E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amir_1419 d2e0798d1056c6fabbaeda5cf7c782e6 347 PRINTS PR00142 RecA protein signature 246 275 8.4E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amir_1419 d2e0798d1056c6fabbaeda5cf7c782e6 347 PRINTS PR00142 RecA protein signature 213 241 8.4E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amir_1419 d2e0798d1056c6fabbaeda5cf7c782e6 347 PRINTS PR00142 RecA protein signature 96 125 8.4E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amir_1419 d2e0798d1056c6fabbaeda5cf7c782e6 347 PRINTS PR00142 RecA protein signature 168 197 8.4E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amir_1419 d2e0798d1056c6fabbaeda5cf7c782e6 347 ProSitePatterns PS00321 recA signature. 216 224 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Amir_1998 4ecf505215613494ef41d0e368537bb5 302 Pfam PF04321 RmlD substrate binding domain 9 277 1.4E-37 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Amir_1998 4ecf505215613494ef41d0e368537bb5 302 Gene3D G3DSA:3.40.50.720 9 284 5.5E-54 T 14-10-2018 Amir_1998 4ecf505215613494ef41d0e368537bb5 302 SUPERFAMILY SSF51735 9 277 6.85E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_7041 e1e977e5f6ea3d250cc02bfa1f6d91e9 79 Pfam PF01084 Ribosomal protein S18 24 72 8.7E-24 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7041 e1e977e5f6ea3d250cc02bfa1f6d91e9 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 25 76 1.0E-21 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7041 e1e977e5f6ea3d250cc02bfa1f6d91e9 79 Gene3D G3DSA:4.10.640.10 1 79 3.1E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7041 e1e977e5f6ea3d250cc02bfa1f6d91e9 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 9 76 3.5E-29 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7041 e1e977e5f6ea3d250cc02bfa1f6d91e9 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 3 77 20.621 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7041 e1e977e5f6ea3d250cc02bfa1f6d91e9 79 SUPERFAMILY SSF46911 5 76 2.88E-26 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7041 e1e977e5f6ea3d250cc02bfa1f6d91e9 79 PRINTS PR00974 Ribosomal protein S18 family signature 32 42 1.6E-16 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7041 e1e977e5f6ea3d250cc02bfa1f6d91e9 79 PRINTS PR00974 Ribosomal protein S18 family signature 42 49 1.6E-16 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7041 e1e977e5f6ea3d250cc02bfa1f6d91e9 79 PRINTS PR00974 Ribosomal protein S18 family signature 64 74 1.6E-16 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7041 e1e977e5f6ea3d250cc02bfa1f6d91e9 79 PRINTS PR00974 Ribosomal protein S18 family signature 50 64 1.6E-16 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7041 e1e977e5f6ea3d250cc02bfa1f6d91e9 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 25 48 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0502 3481582ec9f7b57de247ad4c2ef2bf07 281 Pfam PF01774 UreD urease accessory protein 45 192 3.2E-22 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 Amir_0502 3481582ec9f7b57de247ad4c2ef2bf07 281 Hamap MF_01384 Urease accessory protein UreD [ureD]. 1 247 16.701 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 Amir_1131 39d6962dd93fcbfe03c0080873d4a0e2 332 SUPERFAMILY SSF53822 59 329 4.71E-65 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_1131 39d6962dd93fcbfe03c0080873d4a0e2 332 Pfam PF13377 Periplasmic binding protein-like domain 171 327 5.5E-35 T 14-10-2018 Amir_1131 39d6962dd93fcbfe03c0080873d4a0e2 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 7.1E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1131 39d6962dd93fcbfe03c0080873d4a0e2 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 7.1E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1131 39d6962dd93fcbfe03c0080873d4a0e2 332 Gene3D G3DSA:3.40.50.2300 163 324 6.5E-70 T 14-10-2018 Amir_1131 39d6962dd93fcbfe03c0080873d4a0e2 332 Gene3D G3DSA:3.40.50.2300 60 319 6.5E-70 T 14-10-2018 Amir_1131 39d6962dd93fcbfe03c0080873d4a0e2 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 Amir_1131 39d6962dd93fcbfe03c0080873d4a0e2 332 SMART SM00354 2 69 8.7E-23 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1131 39d6962dd93fcbfe03c0080873d4a0e2 332 SUPERFAMILY SSF47413 3 49 8.13E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1131 39d6962dd93fcbfe03c0080873d4a0e2 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 47 3.5E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1131 39d6962dd93fcbfe03c0080873d4a0e2 332 Gene3D G3DSA:1.10.260.40 2 58 3.7E-16 T 14-10-2018 Amir_0261 b7c2023523854820c793374bc506143f 390 Gene3D G3DSA:1.20.1530.10 10 386 1.1E-129 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily Amir_0261 b7c2023523854820c793374bc506143f 390 Pfam PF06965 Na+/H+ antiporter 1 14 379 1.7E-128 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Amir_0261 b7c2023523854820c793374bc506143f 390 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 12 387 20.84 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Amir_0261 b7c2023523854820c793374bc506143f 390 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 16 378 1.4E-102 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Amir_1037 ba1544a44a120b55b6fbfbac03e104ef 732 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 604 688 9.5E-14 T 14-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain Amir_1037 ba1544a44a120b55b6fbfbac03e104ef 732 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 337 507 1.9E-35 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amir_1037 ba1544a44a120b55b6fbfbac03e104ef 732 Gene3D G3DSA:3.30.70.2390 602 685 3.6E-6 T 14-10-2018 Amir_1037 ba1544a44a120b55b6fbfbac03e104ef 732 Gene3D G3DSA:1.10.260.150 292 601 3.3E-70 T 14-10-2018 Amir_1037 ba1544a44a120b55b6fbfbac03e104ef 732 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 337 507 1.6E-43 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amir_1172 e46d2bbf3dbd2bb68ee27bcf677c8e09 136 Gene3D G3DSA:3.30.70.141 1 136 2.5E-56 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Amir_1172 e46d2bbf3dbd2bb68ee27bcf677c8e09 136 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_1172 e46d2bbf3dbd2bb68ee27bcf677c8e09 136 Pfam PF00334 Nucleoside diphosphate kinase 3 134 5.7E-51 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Amir_1172 e46d2bbf3dbd2bb68ee27bcf677c8e09 136 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.6E-42 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Amir_1172 e46d2bbf3dbd2bb68ee27bcf677c8e09 136 PRINTS PR01243 Nucleoside diphosphate kinase signature 5 27 4.6E-42 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Amir_1172 e46d2bbf3dbd2bb68ee27bcf677c8e09 136 PRINTS PR01243 Nucleoside diphosphate kinase signature 49 68 4.6E-42 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Amir_1172 e46d2bbf3dbd2bb68ee27bcf677c8e09 136 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.6E-42 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Amir_1172 e46d2bbf3dbd2bb68ee27bcf677c8e09 136 PRINTS PR01243 Nucleoside diphosphate kinase signature 69 86 4.6E-42 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Amir_1172 e46d2bbf3dbd2bb68ee27bcf677c8e09 136 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 2 136 32.765 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Amir_1172 e46d2bbf3dbd2bb68ee27bcf677c8e09 136 SMART SM00562 2 136 2.0E-70 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Amir_1172 e46d2bbf3dbd2bb68ee27bcf677c8e09 136 SUPERFAMILY SSF54919 3 135 2.88E-53 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Amir_1448 a06a0d4fa240a3ecf7018b1d3ca0d70b 251 Gene3D G3DSA:3.40.50.300 8 251 3.0E-77 T 14-10-2018 Amir_1448 a06a0d4fa240a3ecf7018b1d3ca0d70b 251 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_1448 a06a0d4fa240a3ecf7018b1d3ca0d70b 251 Pfam PF00005 ABC transporter 26 174 1.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1448 a06a0d4fa240a3ecf7018b1d3ca0d70b 251 PIRSF PIRSF039085 7 250 5.2E-110 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Amir_1448 a06a0d4fa240a3ecf7018b1d3ca0d70b 251 SUPERFAMILY SSF52540 10 244 9.04E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1448 a06a0d4fa240a3ecf7018b1d3ca0d70b 251 SMART SM00382 35 222 4.4E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3967 32882e68ab724b03b96f1aa6da2242b7 139 Pfam PF03779 SPW repeat 31 77 1.6E-4 T 14-10-2018 IPR005530 SPW repeat Amir_3967 32882e68ab724b03b96f1aa6da2242b7 139 Pfam PF03779 SPW repeat 88 133 5.5E-5 T 14-10-2018 IPR005530 SPW repeat Amir_5012 1d18ef8191175737bb629d641dfc51a1 493 SMART SM00267 332 493 1.1E-47 T 14-10-2018 IPR000160 GGDEF domain Amir_5012 1d18ef8191175737bb629d641dfc51a1 493 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 339 489 2.6E-33 T 14-10-2018 IPR000160 GGDEF domain Amir_5012 1d18ef8191175737bb629d641dfc51a1 493 SUPERFAMILY SSF55073 348 491 5.41E-37 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_5012 1d18ef8191175737bb629d641dfc51a1 493 Gene3D G3DSA:3.30.70.270 330 492 3.3E-46 T 14-10-2018 Amir_5012 1d18ef8191175737bb629d641dfc51a1 493 Pfam PF00990 Diguanylate cyclase, GGDEF domain 343 487 4.2E-36 T 14-10-2018 IPR000160 GGDEF domain Amir_4902 f669c2092bc4a016bb71041a3b777f33 146 SUPERFAMILY SSF46785 6 145 1.29E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4902 f669c2092bc4a016bb71041a3b777f33 146 Gene3D G3DSA:1.10.10.10 2 144 1.9E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3438 5cac23ab94313beb55bfe5bf134c85d0 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 3.9E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_3438 5cac23ab94313beb55bfe5bf134c85d0 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 73 86 3.9E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_3438 5cac23ab94313beb55bfe5bf134c85d0 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 165 177 3.9E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_3438 5cac23ab94313beb55bfe5bf134c85d0 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 95 111 3.9E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_3438 5cac23ab94313beb55bfe5bf134c85d0 264 Hamap MF_01974 Methionine aminopeptidase [map]. 2 255 35.27 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_3438 5cac23ab94313beb55bfe5bf134c85d0 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 254 9.6E-75 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_3438 5cac23ab94313beb55bfe5bf134c85d0 264 Pfam PF00557 Metallopeptidase family M24 12 246 9.7E-45 T 14-10-2018 IPR000994 Peptidase M24 Amir_3438 5cac23ab94313beb55bfe5bf134c85d0 264 SUPERFAMILY SSF55920 1 254 5.1E-73 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Amir_3438 5cac23ab94313beb55bfe5bf134c85d0 264 Gene3D G3DSA:3.90.230.10 1 260 4.8E-85 T 14-10-2018 Amir_1074 34e0c6e02c5e6f312119a76d6442248d 393 SUPERFAMILY SSF51395 31 384 1.04E-89 T 14-10-2018 Amir_1074 34e0c6e02c5e6f312119a76d6442248d 393 Gene3D G3DSA:3.20.20.70 28 389 1.3E-128 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_1074 34e0c6e02c5e6f312119a76d6442248d 393 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 282 288 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Amir_1074 34e0c6e02c5e6f312119a76d6442248d 393 PIRSF PIRSF000138 25 388 2.1E-120 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Amir_1074 34e0c6e02c5e6f312119a76d6442248d 393 Pfam PF01070 FMN-dependent dehydrogenase 35 385 9.5E-123 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Amir_3219 2c7dccb04bc8057961cbc98b71c682c7 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3219 2c7dccb04bc8057961cbc98b71c682c7 208 SUPERFAMILY SSF46894 134 206 6.46E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_3219 2c7dccb04bc8057961cbc98b71c682c7 208 SUPERFAMILY SSF52172 3 126 1.85E-29 T 14-10-2018 IPR011006 CheY-like superfamily Amir_3219 2c7dccb04bc8057961cbc98b71c682c7 208 SMART SM00421 143 200 1.6E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3219 2c7dccb04bc8057961cbc98b71c682c7 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 200 2.0E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3219 2c7dccb04bc8057961cbc98b71c682c7 208 Pfam PF00072 Response regulator receiver domain 4 112 1.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3219 2c7dccb04bc8057961cbc98b71c682c7 208 Gene3D G3DSA:3.40.50.12740 2 206 4.3E-62 T 14-10-2018 Amir_3219 2c7dccb04bc8057961cbc98b71c682c7 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 1.8E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3219 2c7dccb04bc8057961cbc98b71c682c7 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 1.8E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3219 2c7dccb04bc8057961cbc98b71c682c7 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 1.8E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3219 2c7dccb04bc8057961cbc98b71c682c7 208 SMART SM00448 2 112 3.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6250 f8e77247f20a24b2d43dc7af7187fcfc 457 SUPERFAMILY SSF52540 5 227 4.1E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6250 f8e77247f20a24b2d43dc7af7187fcfc 457 SMART SM00382 32 210 2.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6250 f8e77247f20a24b2d43dc7af7187fcfc 457 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_6250 f8e77247f20a24b2d43dc7af7187fcfc 457 Pfam PF00005 ABC transporter 24 162 6.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6250 f8e77247f20a24b2d43dc7af7187fcfc 457 Gene3D G3DSA:3.40.50.300 2 233 1.4E-60 T 14-10-2018 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 SUPERFAMILY SSF48264 22 405 6.16E-89 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 347 356 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 Gene3D G3DSA:1.10.630.10 18 405 1.9E-114 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 PRINTS PR00385 P450 superfamily signature 354 365 2.6E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 PRINTS PR00385 P450 superfamily signature 345 354 2.6E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 PRINTS PR00385 P450 superfamily signature 277 288 2.6E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 PRINTS PR00385 P450 superfamily signature 242 259 2.6E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 PRINTS PR00359 B-class P450 signature 323 338 7.8E-51 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 PRINTS PR00359 B-class P450 signature 354 365 7.8E-51 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 PRINTS PR00359 B-class P450 signature 277 288 7.8E-51 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 PRINTS PR00359 B-class P450 signature 142 158 7.8E-51 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 PRINTS PR00359 B-class P450 signature 196 218 7.8E-51 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 PRINTS PR00359 B-class P450 signature 345 354 7.8E-51 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 PRINTS PR00359 B-class P450 signature 295 322 7.8E-51 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 PRINTS PR00359 B-class P450 signature 95 106 7.8E-51 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 Pfam PF00067 Cytochrome P450 278 372 6.9E-23 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3277 2ca017e2f4713d71bab8bf38b19f43b6 405 Pfam PF00067 Cytochrome P450 211 271 1.1E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_6586 10595afe8cf16ed754e54a86a8e43fa9 126 PIRSF PIRSF002134 1 125 4.3E-43 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6586 10595afe8cf16ed754e54a86a8e43fa9 126 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6586 10595afe8cf16ed754e54a86a8e43fa9 126 Pfam PF00416 Ribosomal protein S13/S18 3 109 1.2E-31 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6586 10595afe8cf16ed754e54a86a8e43fa9 126 Gene3D G3DSA:4.10.910.10 73 126 1.8E-25 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6586 10595afe8cf16ed754e54a86a8e43fa9 126 Gene3D G3DSA:1.10.8.50 1 72 1.5E-29 T 14-10-2018 Amir_6586 10595afe8cf16ed754e54a86a8e43fa9 126 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 2.0E-52 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6586 10595afe8cf16ed754e54a86a8e43fa9 126 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 26.242 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6586 10595afe8cf16ed754e54a86a8e43fa9 126 SUPERFAMILY SSF46946 2 122 9.94E-46 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Amir_5147 7898767c852fad189c774488811beb0c 137 Gene3D G3DSA:3.10.580.10 1 125 7.3E-39 T 14-10-2018 Amir_5147 7898767c852fad189c774488811beb0c 137 SMART SM00116 76 123 3.5E-7 T 14-10-2018 IPR000644 CBS domain Amir_5147 7898767c852fad189c774488811beb0c 137 SMART SM00116 11 59 3.8E-8 T 14-10-2018 IPR000644 CBS domain Amir_5147 7898767c852fad189c774488811beb0c 137 SUPERFAMILY SSF54631 2 129 1.77E-31 T 14-10-2018 Amir_5147 7898767c852fad189c774488811beb0c 137 Pfam PF00571 CBS domain 4 55 1.1E-10 T 14-10-2018 IPR000644 CBS domain Amir_5147 7898767c852fad189c774488811beb0c 137 Pfam PF00571 CBS domain 74 123 2.1E-11 T 14-10-2018 IPR000644 CBS domain Amir_4627 c8332e8a6e2608d8683455b64f0eb5b3 233 TIGRFAM TIGR04539 tRNA_cyclodipep: tRNA-dependent cyclodipeptide synthase 13 231 2.4E-77 T 14-10-2018 IPR030903 Cyclodipeptide synthase GO:0016755 Amir_4627 c8332e8a6e2608d8683455b64f0eb5b3 233 Gene3D G3DSA:3.40.50.11710 2 233 6.1E-75 T 14-10-2018 IPR038622 Cyclodipeptide synthase superfamily GO:0016755 Amir_4627 c8332e8a6e2608d8683455b64f0eb5b3 233 Pfam PF16715 Cyclodipeptide synthase 13 231 1.2E-74 T 14-10-2018 IPR030903 Cyclodipeptide synthase GO:0016755 Amir_5516 d5d307792a3f40610ce4573c60438ba6 723 Pfam PF02151 UvrB/uvrC motif 680 713 1.9E-6 T 14-10-2018 IPR001943 UVR domain GO:0005515 Amir_5516 d5d307792a3f40610ce4573c60438ba6 723 Pfam PF00271 Helicase conserved C-terminal domain 464 572 1.5E-17 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_5516 d5d307792a3f40610ce4573c60438ba6 723 Pfam PF12344 Ultra-violet resistance protein B 580 621 6.8E-21 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Amir_5516 d5d307792a3f40610ce4573c60438ba6 723 Gene3D G3DSA:3.40.50.300 303 442 6.5E-54 T 14-10-2018 Amir_5516 d5d307792a3f40610ce4573c60438ba6 723 Hamap MF_00204 UvrABC system protein B [uvrB]. 32 713 42.674 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Amir_5516 d5d307792a3f40610ce4573c60438ba6 723 Pfam PF04851 Type III restriction enzyme, res subunit 43 157 1.2E-6 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Amir_5516 d5d307792a3f40610ce4573c60438ba6 723 SUPERFAMILY SSF52540 61 621 1.78E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5516 d5d307792a3f40610ce4573c60438ba6 723 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 33 711 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Amir_5516 d5d307792a3f40610ce4573c60438ba6 723 SUPERFAMILY SSF52540 34 443 1.54E-130 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5516 d5d307792a3f40610ce4573c60438ba6 723 SUPERFAMILY SSF46600 669 715 6.15E-10 T 14-10-2018 IPR036876 UVR domain superfamily Amir_5516 d5d307792a3f40610ce4573c60438ba6 723 Gene3D G3DSA:4.10.860.10 667 715 1.3E-6 T 14-10-2018 Amir_5516 d5d307792a3f40610ce4573c60438ba6 723 SMART SM00490 488 574 7.3E-19 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_5516 d5d307792a3f40610ce4573c60438ba6 723 Gene3D G3DSA:3.40.50.300 26 270 3.1E-72 T 14-10-2018 Amir_5516 d5d307792a3f40610ce4573c60438ba6 723 Gene3D G3DSA:3.40.50.300 443 624 1.7E-48 T 14-10-2018 Amir_5516 d5d307792a3f40610ce4573c60438ba6 723 SMART SM00487 38 453 5.2E-25 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_2484 5ae38ffd43e7b582e741f8ba65212371 559 Gene3D G3DSA:3.40.190.10 33 136 1.5E-6 T 14-10-2018 Amir_2484 5ae38ffd43e7b582e741f8ba65212371 559 Gene3D G3DSA:3.40.50.410 376 556 1.0E-25 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_2484 5ae38ffd43e7b582e741f8ba65212371 559 SUPERFAMILY SSF53850 65 370 6.01E-15 T 14-10-2018 Amir_2484 5ae38ffd43e7b582e741f8ba65212371 559 Pfam PF13531 Bacterial extracellular solute-binding protein 66 332 5.1E-21 T 14-10-2018 Amir_2484 5ae38ffd43e7b582e741f8ba65212371 559 SUPERFAMILY SSF53300 378 555 1.36E-19 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_2484 5ae38ffd43e7b582e741f8ba65212371 559 Pfam PF00092 von Willebrand factor type A domain 380 540 5.0E-7 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_2484 5ae38ffd43e7b582e741f8ba65212371 559 SMART SM00327 375 552 5.0E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_3972 b511a16de31a03c25b97f439d1dd9284 416 Pfam PF01494 FAD binding domain 5 332 5.4E-43 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_3972 b511a16de31a03c25b97f439d1dd9284 416 SUPERFAMILY SSF51905 6 360 8.48E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3972 b511a16de31a03c25b97f439d1dd9284 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 4.4E-21 T 14-10-2018 Amir_3972 b511a16de31a03c25b97f439d1dd9284 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 4.4E-21 T 14-10-2018 Amir_3972 b511a16de31a03c25b97f439d1dd9284 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 4.4E-21 T 14-10-2018 Amir_3972 b511a16de31a03c25b97f439d1dd9284 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 4.4E-21 T 14-10-2018 Amir_3972 b511a16de31a03c25b97f439d1dd9284 416 Gene3D G3DSA:3.50.50.60 2 363 8.0E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3333 ee029eb5c408e52c585a86a738112c9a 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 3.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3333 ee029eb5c408e52c585a86a738112c9a 227 Gene3D G3DSA:1.10.357.10 10 220 1.0E-50 T 14-10-2018 Amir_3333 ee029eb5c408e52c585a86a738112c9a 227 SUPERFAMILY SSF46689 8 81 8.72E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_1593 13eacd2e5e0f6d50d72d793a01e43cf7 736 Pfam PF01569 PAP2 superfamily 67 171 4.4E-19 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Amir_1593 13eacd2e5e0f6d50d72d793a01e43cf7 736 SMART SM00014 63 169 2.9E-13 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Amir_1593 13eacd2e5e0f6d50d72d793a01e43cf7 736 Gene3D G3DSA:1.20.144.10 94 186 3.2E-17 T 14-10-2018 Amir_1593 13eacd2e5e0f6d50d72d793a01e43cf7 736 SUPERFAMILY SSF48317 21 174 6.93E-29 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Amir_3302 c787d5e12df39afcaf9e2dd073574d53 532 SUPERFAMILY SSF49899 334 521 9.1E-28 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_3302 c787d5e12df39afcaf9e2dd073574d53 532 Gene3D G3DSA:2.60.120.200 332 528 5.0E-63 T 14-10-2018 Amir_3302 c787d5e12df39afcaf9e2dd073574d53 532 Pfam PF04616 Glycosyl hydrolases family 43 36 302 1.3E-36 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Amir_3302 c787d5e12df39afcaf9e2dd073574d53 532 SUPERFAMILY SSF75005 36 323 1.01E-61 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3302 c787d5e12df39afcaf9e2dd073574d53 532 Gene3D G3DSA:2.115.10.20 30 320 6.5E-68 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_2785 862949cbc70738cde09725671fddfb8b 487 Gene3D G3DSA:3.40.309.10 263 452 1.1E-175 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_2785 862949cbc70738cde09725671fddfb8b 487 Pfam PF00171 Aldehyde dehydrogenase family 30 483 1.1E-164 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_2785 862949cbc70738cde09725671fddfb8b 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Amir_2785 862949cbc70738cde09725671fddfb8b 487 Gene3D G3DSA:3.40.605.10 19 481 1.1E-175 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_2785 862949cbc70738cde09725671fddfb8b 487 SUPERFAMILY SSF53720 15 486 1.2E-164 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_4329 186333d69ab8fa9dc75e6d7536a8a5f9 290 Pfam PF13560 Helix-turn-helix domain 12 92 8.8E-15 T 14-10-2018 Amir_4329 186333d69ab8fa9dc75e6d7536a8a5f9 290 SMART SM00530 16 89 1.2E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_4329 186333d69ab8fa9dc75e6d7536a8a5f9 290 Gene3D G3DSA:1.10.260.40 32 92 8.1E-6 T 14-10-2018 Amir_4329 186333d69ab8fa9dc75e6d7536a8a5f9 290 SUPERFAMILY SSF47413 36 88 2.12E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_4329 186333d69ab8fa9dc75e6d7536a8a5f9 290 Gene3D G3DSA:3.30.450.180 114 287 2.7E-13 T 14-10-2018 Amir_0746 f16c97299e4af781d02de2b35af18368 344 Gene3D G3DSA:3.40.190.10 132 339 9.3E-100 T 14-10-2018 Amir_0746 f16c97299e4af781d02de2b35af18368 344 Gene3D G3DSA:3.40.190.10 34 313 9.3E-100 T 14-10-2018 Amir_0746 f16c97299e4af781d02de2b35af18368 344 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 31 338 4.2E-67 T 14-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 Amir_0746 f16c97299e4af781d02de2b35af18368 344 Pfam PF13343 Bacterial extracellular solute-binding protein 80 307 1.8E-24 T 14-10-2018 Amir_0746 f16c97299e4af781d02de2b35af18368 344 SUPERFAMILY SSF53850 33 339 6.79E-48 T 14-10-2018 Amir_5981 54933aad5cb391c33c079ac765cbddc8 164 SMART SM00347 35 133 8.8E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_5981 54933aad5cb391c33c079ac765cbddc8 164 Pfam PF12802 MarR family 41 101 1.3E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_5981 54933aad5cb391c33c079ac765cbddc8 164 SUPERFAMILY SSF46785 11 113 4.1E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5981 54933aad5cb391c33c079ac765cbddc8 164 Gene3D G3DSA:1.10.10.10 10 132 7.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 Pfam PF00122 E1-E2 ATPase 123 288 4.1E-35 T 14-10-2018 Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 84 331 2.1E-33 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 374 593 1.1E-46 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 438 449 9.4E-26 T 14-10-2018 Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 513 532 9.4E-26 T 14-10-2018 Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 159 173 9.4E-26 T 14-10-2018 Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 310 324 9.4E-26 T 14-10-2018 Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 460 470 9.4E-26 T 14-10-2018 Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 536 548 9.4E-26 T 14-10-2018 Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 30 673 5.1E-297 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 312 318 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 SUPERFAMILY SSF81653 124 212 9.02E-21 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 SUPERFAMILY SSF56784 309 563 2.35E-38 T 14-10-2018 IPR036412 HAD-like superfamily Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 Gene3D G3DSA:3.40.1110.10 324 443 3.6E-40 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 SUPERFAMILY SSF81665 47 304 3.66E-13 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 Gene3D G3DSA:2.70.150.20 110 217 2.3E-26 T 14-10-2018 Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 27 677 39.509 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 Amir_3230 4bebdc12cd54e4d47714ff85781a5d8b 680 Pfam PF00702 haloacid dehalogenase-like hydrolase 306 527 7.5E-33 T 14-10-2018 Amir_2826 afa4399eeb5bf61db9b0672eabaa6348 79 Gene3D G3DSA:1.10.1200.10 2 79 5.7E-17 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2826 afa4399eeb5bf61db9b0672eabaa6348 79 SUPERFAMILY SSF47336 3 78 4.45E-17 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2826 afa4399eeb5bf61db9b0672eabaa6348 79 Pfam PF00550 Phosphopantetheine attachment site 12 75 1.3E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2826 afa4399eeb5bf61db9b0672eabaa6348 79 SMART SM00823 Phosphopantetheine attachment site 8 67 4.0E-5 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_6231 ac8c333815eb9c5e52b2a60ff97f04dc 197 Gene3D G3DSA:1.10.10.60 8 49 6.9E-23 T 14-10-2018 Amir_6231 ac8c333815eb9c5e52b2a60ff97f04dc 197 SUPERFAMILY SSF48498 80 185 4.45E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_6231 ac8c333815eb9c5e52b2a60ff97f04dc 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 5.9E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6231 ac8c333815eb9c5e52b2a60ff97f04dc 197 Gene3D G3DSA:1.10.357.10 51 190 1.4E-37 T 14-10-2018 Amir_6231 ac8c333815eb9c5e52b2a60ff97f04dc 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.5E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6231 ac8c333815eb9c5e52b2a60ff97f04dc 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.5E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6231 ac8c333815eb9c5e52b2a60ff97f04dc 197 SUPERFAMILY SSF46689 5 84 3.26E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 Gene3D G3DSA:3.30.70.80 38 116 1.5E-18 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 Pfam PF00082 Subtilase family 159 376 4.0E-34 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 Gene3D G3DSA:2.60.40.10 393 478 3.2E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 154 165 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 PRINTS PR00723 Subtilisin serine protease family (S8) signature 185 198 6.1E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 PRINTS PR00723 Subtilisin serine protease family (S8) signature 149 168 6.1E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 PRINTS PR00723 Subtilisin serine protease family (S8) signature 338 354 6.1E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 Pfam PF05922 Peptidase inhibitor I9 47 113 5.5E-8 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 SUPERFAMILY SSF52743 122 376 3.14E-68 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 Pfam PF01483 Proprotein convertase P-domain 518 596 4.6E-20 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 SUPERFAMILY SSF49785 495 595 4.25E-22 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 339 349 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 189 199 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 SUPERFAMILY SSF54897 45 116 1.19E-11 T 14-10-2018 Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 Gene3D G3DSA:2.60.120.260 479 597 1.5E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 SUPERFAMILY SSF49313 410 481 4.39E-6 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Amir_2202 9b74b5600ae76ee5b55bf5f97919670c 597 Gene3D G3DSA:3.40.50.200 122 392 9.3E-85 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_3939 8aac32ca7db93cbe25ae7aaab419ed1c 206 Gene3D G3DSA:3.40.430.10 2 203 9.2E-51 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_3939 8aac32ca7db93cbe25ae7aaab419ed1c 206 SUPERFAMILY SSF53597 5 204 6.28E-24 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_3939 8aac32ca7db93cbe25ae7aaab419ed1c 206 Pfam PF01872 RibD C-terminal domain 4 192 1.5E-17 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Amir_4818 4b31f9f67ee890a77d2da843835a1f78 361 Gene3D G3DSA:3.30.360.10 127 331 7.6E-76 T 14-10-2018 Amir_4818 4b31f9f67ee890a77d2da843835a1f78 361 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 244 1.9E-11 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Amir_4818 4b31f9f67ee890a77d2da843835a1f78 361 SUPERFAMILY SSF51735 5 156 9.51E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4818 4b31f9f67ee890a77d2da843835a1f78 361 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 118 4.4E-20 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amir_4818 4b31f9f67ee890a77d2da843835a1f78 361 SUPERFAMILY SSF55347 131 266 6.21E-27 T 14-10-2018 Amir_4818 4b31f9f67ee890a77d2da843835a1f78 361 Gene3D G3DSA:3.40.50.720 6 310 7.6E-76 T 14-10-2018 Amir_6573 1b1525e572ecf863ba62ad1b128d798c 492 TIGRFAM TIGR03921 T7SS_mycosin: type VII secretion-associated serine protease mycosin 97 485 4.9E-106 T 14-10-2018 IPR023834 Type VII secretion system peptidase S8A, mycosin Amir_6573 1b1525e572ecf863ba62ad1b128d798c 492 SUPERFAMILY SSF52743 91 423 1.24E-67 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_6573 1b1525e572ecf863ba62ad1b128d798c 492 PRINTS PR00723 Subtilisin serine protease family (S8) signature 361 377 8.8E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_6573 1b1525e572ecf863ba62ad1b128d798c 492 PRINTS PR00723 Subtilisin serine protease family (S8) signature 148 161 8.8E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_6573 1b1525e572ecf863ba62ad1b128d798c 492 PRINTS PR00723 Subtilisin serine protease family (S8) signature 108 127 8.8E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_6573 1b1525e572ecf863ba62ad1b128d798c 492 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 362 372 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_6573 1b1525e572ecf863ba62ad1b128d798c 492 Gene3D G3DSA:3.40.50.200 50 426 2.3E-90 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_6573 1b1525e572ecf863ba62ad1b128d798c 492 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 152 162 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Amir_6573 1b1525e572ecf863ba62ad1b128d798c 492 Pfam PF00082 Subtilase family 108 413 4.7E-40 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_4376 540a2282473c82c2c620e8bd93c8ca08 782 Gene3D G3DSA:3.30.365.10 549 760 9.9E-36 T 14-10-2018 Amir_4376 540a2282473c82c2c620e8bd93c8ca08 782 Gene3D G3DSA:3.30.365.10 75 213 5.7E-22 T 14-10-2018 Amir_4376 540a2282473c82c2c620e8bd93c8ca08 782 Gene3D G3DSA:3.30.365.10 362 451 3.6E-17 T 14-10-2018 Amir_4376 540a2282473c82c2c620e8bd93c8ca08 782 SMART SM01008 241 320 6.4E-5 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Amir_4376 540a2282473c82c2c620e8bd93c8ca08 782 PIRSF PIRSF036389 15 760 2.9E-149 T 14-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related Amir_4376 540a2282473c82c2c620e8bd93c8ca08 782 Gene3D G3DSA:3.90.1170.50 214 294 4.5E-7 T 14-10-2018 Amir_4376 540a2282473c82c2c620e8bd93c8ca08 782 SUPERFAMILY SSF56003 57 251 4.45E-27 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Amir_4376 540a2282473c82c2c620e8bd93c8ca08 782 SUPERFAMILY SSF56003 348 754 7.44E-73 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Amir_4376 540a2282473c82c2c620e8bd93c8ca08 782 SUPERFAMILY SSF54665 216 320 1.96E-17 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Amir_4376 540a2282473c82c2c620e8bd93c8ca08 782 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 349 451 3.6E-13 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Amir_4376 540a2282473c82c2c620e8bd93c8ca08 782 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 644 700 1.6E-7 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Amir_4376 540a2282473c82c2c620e8bd93c8ca08 782 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 79 211 7.8E-15 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Amir_4084 e21a8145847e29da24f4521502eed8f5 394 Gene3D G3DSA:2.40.110.10 115 207 2.3E-24 T 14-10-2018 Amir_4084 e21a8145847e29da24f4521502eed8f5 394 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 25 102 7.3E-7 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_4084 e21a8145847e29da24f4521502eed8f5 394 Gene3D G3DSA:1.20.140.10 215 393 2.6E-37 T 14-10-2018 Amir_4084 e21a8145847e29da24f4521502eed8f5 394 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 240 371 5.9E-28 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Amir_4084 e21a8145847e29da24f4521502eed8f5 394 SUPERFAMILY SSF47203 239 372 5.23E-13 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_4084 e21a8145847e29da24f4521502eed8f5 394 Gene3D G3DSA:1.10.540.10 6 113 6.9E-29 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_4084 e21a8145847e29da24f4521502eed8f5 394 SUPERFAMILY SSF56645 13 207 1.31E-29 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_4084 e21a8145847e29da24f4521502eed8f5 394 PIRSF PIRSF016578 1 394 1.4E-115 T 14-10-2018 Amir_1106 d37d3a8adec5070a1edf51d44854a2c9 303 SUPERFAMILY SSF56112 9 277 1.41E-37 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_1106 d37d3a8adec5070a1edf51d44854a2c9 303 Gene3D G3DSA:3.90.1200.10 111 296 3.3E-13 T 14-10-2018 Amir_1106 d37d3a8adec5070a1edf51d44854a2c9 303 Pfam PF01636 Phosphotransferase enzyme family 50 246 4.4E-19 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_4704 c6b59ba9ea07d4dc19bd1aad94c1da70 478 Pfam PF07690 Major Facilitator Superfamily 29 420 1.1E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_4704 c6b59ba9ea07d4dc19bd1aad94c1da70 478 Gene3D G3DSA:1.20.1250.20 269 464 1.5E-16 T 14-10-2018 Amir_4704 c6b59ba9ea07d4dc19bd1aad94c1da70 478 SUPERFAMILY SSF103473 13 461 1.44E-60 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4704 c6b59ba9ea07d4dc19bd1aad94c1da70 478 Gene3D G3DSA:1.20.1720.10 23 238 5.2E-39 T 14-10-2018 Amir_1466 b1916ebcd0ac214dd59598f6513af0a2 282 SUPERFAMILY SSF52821 149 279 8.64E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_1466 b1916ebcd0ac214dd59598f6513af0a2 282 SUPERFAMILY SSF52821 2 147 9.04E-37 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_1466 b1916ebcd0ac214dd59598f6513af0a2 282 SMART SM00450 151 274 6.8E-14 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_1466 b1916ebcd0ac214dd59598f6513af0a2 282 SMART SM00450 6 130 3.6E-24 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_1466 b1916ebcd0ac214dd59598f6513af0a2 282 Gene3D G3DSA:3.40.250.10 1 149 3.8E-45 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_1466 b1916ebcd0ac214dd59598f6513af0a2 282 Pfam PF00581 Rhodanese-like domain 161 270 2.5E-9 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_1466 b1916ebcd0ac214dd59598f6513af0a2 282 Pfam PF00581 Rhodanese-like domain 12 126 5.3E-18 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_1466 b1916ebcd0ac214dd59598f6513af0a2 282 Gene3D G3DSA:3.40.250.10 155 277 1.1E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_1336 5a2b02c5f8109ec19a56988e5011e660 152 Pfam PF00578 AhpC/TSA family 4 129 5.6E-38 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amir_1336 5a2b02c5f8109ec19a56988e5011e660 152 SUPERFAMILY SSF52833 1 151 2.94E-48 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_1336 5a2b02c5f8109ec19a56988e5011e660 152 Gene3D G3DSA:3.40.30.10 1 152 3.1E-52 T 14-10-2018 Amir_1336 5a2b02c5f8109ec19a56988e5011e660 152 PIRSF PIRSF000239 1 152 1.8E-26 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amir_4310 8e0247274667bfacc1640819887464b1 203 Pfam PF01613 Flavin reductase like domain 59 198 8.8E-24 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amir_4310 8e0247274667bfacc1640819887464b1 203 Gene3D G3DSA:2.30.110.10 44 200 3.0E-37 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_4310 8e0247274667bfacc1640819887464b1 203 SUPERFAMILY SSF50475 49 199 3.73E-35 T 14-10-2018 Amir_4310 8e0247274667bfacc1640819887464b1 203 SMART SM00903 58 200 7.8E-35 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 Gene3D G3DSA:3.40.50.300 202 334 1.6E-40 T 14-10-2018 Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 SMART SM00956 405 511 6.6E-42 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 9 460 2.0E-150 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 SUPERFAMILY SSF47819 532 605 2.07E-21 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 Gene3D G3DSA:1.10.10.10 335 533 5.6E-49 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 SMART SM00487 15 211 1.4E-23 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 8 603 3.2E-231 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 Pfam PF16124 RecQ zinc-binding 337 398 4.6E-18 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 Pfam PF00570 HRDC domain 537 603 7.9E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 Gene3D G3DSA:3.40.50.300 1 201 8.9E-77 T 14-10-2018 Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 SUPERFAMILY SSF52540 201 457 2.35E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 SUPERFAMILY SSF52540 8 190 2.17E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 Gene3D G3DSA:1.10.150.80 535 606 6.5E-23 T 14-10-2018 Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 Pfam PF09382 RQC domain 400 513 4.8E-33 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 SMART SM00490 244 325 8.4E-23 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 SMART SM00341 534 606 6.8E-10 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 Pfam PF00271 Helicase conserved C-terminal domain 218 324 2.4E-15 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_5549 ec6b8568ec3cef122f211c52d7c61b01 606 Pfam PF00270 DEAD/DEAH box helicase 23 179 1.3E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amir_1825 c0217f501b18ab7074fc44493a429716 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 49 7.8E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1825 c0217f501b18ab7074fc44493a429716 346 Gene3D G3DSA:3.40.50.2300 115 333 2.5E-65 T 14-10-2018 Amir_1825 c0217f501b18ab7074fc44493a429716 346 Gene3D G3DSA:3.40.50.2300 172 337 2.5E-65 T 14-10-2018 Amir_1825 c0217f501b18ab7074fc44493a429716 346 SMART SM00354 3 70 3.4E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1825 c0217f501b18ab7074fc44493a429716 346 SUPERFAMILY SSF53822 113 343 1.08E-68 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_1825 c0217f501b18ab7074fc44493a429716 346 Pfam PF13377 Periplasmic binding protein-like domain 181 342 4.7E-42 T 14-10-2018 Amir_1825 c0217f501b18ab7074fc44493a429716 346 Gene3D G3DSA:1.10.260.40 1 59 1.4E-15 T 14-10-2018 Amir_1825 c0217f501b18ab7074fc44493a429716 346 SUPERFAMILY SSF47413 2 49 1.6E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_4779 f3c316a805be889ecaa559167ca26cfc 270 Pfam PF04016 Putative heavy-metal chelation 138 244 1.2E-10 T 14-10-2018 IPR007161 Putative heavy-metal chelation domain Amir_4779 f3c316a805be889ecaa559167ca26cfc 270 Gene3D G3DSA:3.40.50.11590 136 247 2.6E-7 T 14-10-2018 Amir_4779 f3c316a805be889ecaa559167ca26cfc 270 SUPERFAMILY SSF159713 48 245 6.8E-20 T 14-10-2018 Amir_3397 4915c62bf75896eaf5487515dbfde69e 518 Pfam PF07969 Amidohydrolase family 46 515 9.5E-85 T 14-10-2018 IPR013108 Amidohydrolase 3 Amir_3397 4915c62bf75896eaf5487515dbfde69e 518 Gene3D G3DSA:3.20.20.140 58 453 2.7E-90 T 14-10-2018 Amir_3397 4915c62bf75896eaf5487515dbfde69e 518 Gene3D G3DSA:3.10.310.70 76 180 2.7E-90 T 14-10-2018 Amir_3397 4915c62bf75896eaf5487515dbfde69e 518 SUPERFAMILY SSF51338 3 74 2.99E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_3397 4915c62bf75896eaf5487515dbfde69e 518 Gene3D G3DSA:2.30.40.10 14 467 2.7E-90 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_3397 4915c62bf75896eaf5487515dbfde69e 518 SUPERFAMILY SSF51556 57 449 1.16E-32 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_6342 c5cf978fe7d7c1a68cf44f4638c53a3f 300 Gene3D G3DSA:3.90.550.10 1 204 6.0E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_6342 c5cf978fe7d7c1a68cf44f4638c53a3f 300 SUPERFAMILY SSF53448 1 222 2.25E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_6342 c5cf978fe7d7c1a68cf44f4638c53a3f 300 Pfam PF00535 Glycosyl transferase family 2 1 152 3.3E-18 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_2017 15f111f358f34d49ad084f80c05e6207 267 Pfam PF10099 Anti-sigma-K factor rskA 63 262 1.8E-20 T 14-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 Amir_2017 15f111f358f34d49ad084f80c05e6207 267 Gene3D G3DSA:1.10.10.1320 8 77 3.7E-12 T 14-10-2018 Amir_5887 58da90198d4d83945652356c154a72b3 284 PIRSF PIRSF021603 2 284 1.0E-115 T 14-10-2018 IPR016794 Uncharacterised conserved protein UCP21603, acetyltransferase-like Amir_5887 58da90198d4d83945652356c154a72b3 284 Pfam PF13312 Domain of unknown function (DUF4081) 48 156 3.5E-41 T 14-10-2018 IPR025289 Domain of unknown function DUF4081 Amir_5887 58da90198d4d83945652356c154a72b3 284 SUPERFAMILY SSF55729 87 279 3.06E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_5887 58da90198d4d83945652356c154a72b3 284 Gene3D G3DSA:3.40.630.30 55 283 4.0E-18 T 14-10-2018 Amir_5887 58da90198d4d83945652356c154a72b3 284 Pfam PF08445 FR47-like protein 212 277 4.2E-10 T 14-10-2018 IPR013653 FR47-like GO:0016747 Amir_2295 90c81a18693ce39271ce3cff2917cf6b 429 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 396 427 0.0031 T 14-10-2018 Amir_2295 90c81a18693ce39271ce3cff2917cf6b 429 Gene3D G3DSA:1.50.10.20 175 317 1.7E-12 T 14-10-2018 Amir_2295 90c81a18693ce39271ce3cff2917cf6b 429 SUPERFAMILY SSF48239 84 289 2.69E-17 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Amir_1244 328d1c6923b30088f7263d7a53673ac1 404 Gene3D G3DSA:3.40.50.1110 195 403 4.1E-30 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_1244 328d1c6923b30088f7263d7a53673ac1 404 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 208 393 5.1E-26 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_1244 328d1c6923b30088f7263d7a53673ac1 404 SUPERFAMILY SSF52266 204 403 5.65E-44 T 14-10-2018 Amir_4533 1d259d7dabff891ce166e96b186766eb 360 Gene3D G3DSA:3.40.50.2000 240 348 2.6E-5 T 14-10-2018 Amir_0067 86ca6f28197f014b49555f8879e91768 275 SMART SM00448 5 131 4.4E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0067 86ca6f28197f014b49555f8879e91768 275 Pfam PF04397 LytTr DNA-binding domain 169 266 8.0E-22 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Amir_0067 86ca6f28197f014b49555f8879e91768 275 Gene3D G3DSA:2.40.50.40 159 227 2.2E-8 T 14-10-2018 Amir_0067 86ca6f28197f014b49555f8879e91768 275 Pfam PF00072 Response regulator receiver domain 7 131 1.1E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0067 86ca6f28197f014b49555f8879e91768 275 SUPERFAMILY SSF52172 4 146 1.85E-23 T 14-10-2018 IPR011006 CheY-like superfamily Amir_0067 86ca6f28197f014b49555f8879e91768 275 SMART SM00850 167 267 5.1E-30 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Amir_0067 86ca6f28197f014b49555f8879e91768 275 Gene3D G3DSA:3.40.50.2300 2 145 5.1E-22 T 14-10-2018 Amir_3534 9e3dbbbaa87bd46ba011330b4be4d841 248 Pfam PF01614 Bacterial transcriptional regulator 127 227 8.5E-27 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Amir_3534 9e3dbbbaa87bd46ba011330b4be4d841 248 Gene3D G3DSA:3.30.450.40 80 248 2.1E-49 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_3534 9e3dbbbaa87bd46ba011330b4be4d841 248 Pfam PF09339 IclR helix-turn-helix domain 14 62 7.1E-12 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_3534 9e3dbbbaa87bd46ba011330b4be4d841 248 SUPERFAMILY SSF55781 74 247 2.29E-44 T 14-10-2018 Amir_3534 9e3dbbbaa87bd46ba011330b4be4d841 248 SMART SM00346 10 99 1.6E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_3534 9e3dbbbaa87bd46ba011330b4be4d841 248 Gene3D G3DSA:1.10.10.10 11 79 1.1E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3534 9e3dbbbaa87bd46ba011330b4be4d841 248 SUPERFAMILY SSF46785 13 80 6.48E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3842 8566eed308bdf5027df9c461f1636dbe 178 Pfam PF13499 EF-hand domain pair 8 129 2.8E-7 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Amir_3842 8566eed308bdf5027df9c461f1636dbe 178 SUPERFAMILY SSF47473 5 170 7.15E-23 T 14-10-2018 IPR011992 EF-hand domain pair Amir_3842 8566eed308bdf5027df9c461f1636dbe 178 Pfam PF00036 EF hand 140 165 4.9E-6 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Amir_3842 8566eed308bdf5027df9c461f1636dbe 178 Gene3D G3DSA:1.10.238.10 3 177 7.8E-39 T 14-10-2018 Amir_3842 8566eed308bdf5027df9c461f1636dbe 178 ProSitePatterns PS00018 EF-hand calcium-binding domain. 113 125 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site Amir_3842 8566eed308bdf5027df9c461f1636dbe 178 ProSitePatterns PS00018 EF-hand calcium-binding domain. 147 159 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site Amir_3842 8566eed308bdf5027df9c461f1636dbe 178 SMART SM00054 138 166 0.0029 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Amir_3842 8566eed308bdf5027df9c461f1636dbe 178 SMART SM00054 104 132 0.0015 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Amir_3214 31de2e202b33185e920e62ae61876b78 457 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 259 269 - T 14-10-2018 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_3214 31de2e202b33185e920e62ae61876b78 457 PRINTS PR00134 Glycosyl hydrolase family 10 signature 153 164 4.0E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_3214 31de2e202b33185e920e62ae61876b78 457 PRINTS PR00134 Glycosyl hydrolase family 10 signature 111 123 4.0E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_3214 31de2e202b33185e920e62ae61876b78 457 PRINTS PR00134 Glycosyl hydrolase family 10 signature 198 209 4.0E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_3214 31de2e202b33185e920e62ae61876b78 457 PRINTS PR00134 Glycosyl hydrolase family 10 signature 227 239 4.0E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_3214 31de2e202b33185e920e62ae61876b78 457 Pfam PF00331 Glycosyl hydrolase family 10 39 329 1.0E-104 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_3214 31de2e202b33185e920e62ae61876b78 457 SUPERFAMILY SSF49384 358 454 3.98E-21 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_3214 31de2e202b33185e920e62ae61876b78 457 SMART SM00633 80 331 8.6E-128 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_3214 31de2e202b33185e920e62ae61876b78 457 Gene3D G3DSA:2.60.40.290 359 456 4.6E-22 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_3214 31de2e202b33185e920e62ae61876b78 457 Pfam PF00553 Cellulose binding domain 364 449 1.7E-17 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_3214 31de2e202b33185e920e62ae61876b78 457 SUPERFAMILY SSF51445 38 332 6.48E-109 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_3214 31de2e202b33185e920e62ae61876b78 457 Gene3D G3DSA:3.20.20.80 34 339 1.7E-117 T 14-10-2018 Amir_3214 31de2e202b33185e920e62ae61876b78 457 SMART SM00637 364 454 4.6E-21 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_6160 243efcf4f9248748055fdbb6df9eb866 253 Gene3D G3DSA:1.20.1260.10 68 248 1.4E-58 T 14-10-2018 IPR012347 Ferritin-like Amir_6160 243efcf4f9248748055fdbb6df9eb866 253 Pfam PF03713 Domain of unknown function (DUF305) 75 244 6.9E-45 T 14-10-2018 IPR005183 Domain of unknown function DUF305 Amir_3719 e6cea3fee47e47206bb9f4cf4ce9ac93 227 SMART SM00419 170 217 9.6E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amir_3719 e6cea3fee47e47206bb9f4cf4ce9ac93 227 SUPERFAMILY SSF51206 28 122 1.3E-18 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Amir_3719 e6cea3fee47e47206bb9f4cf4ce9ac93 227 SMART SM00100 17 135 3.9E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_3719 e6cea3fee47e47206bb9f4cf4ce9ac93 227 Pfam PF00027 Cyclic nucleotide-binding domain 35 120 8.6E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_3719 e6cea3fee47e47206bb9f4cf4ce9ac93 227 Gene3D G3DSA:2.60.120.10 16 142 2.5E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_3719 e6cea3fee47e47206bb9f4cf4ce9ac93 227 Gene3D G3DSA:1.10.10.10 152 226 8.2E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3719 e6cea3fee47e47206bb9f4cf4ce9ac93 227 Pfam PF13545 Crp-like helix-turn-helix domain 154 223 4.5E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amir_3719 e6cea3fee47e47206bb9f4cf4ce9ac93 227 SUPERFAMILY SSF46785 152 225 5.36E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3060 7be651421710a85a9446e0b5e382c37c 313 Pfam PF12840 Helix-turn-helix domain 236 289 2.4E-9 T 14-10-2018 Amir_3060 7be651421710a85a9446e0b5e382c37c 313 SMART SM00418 234 310 0.0047 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3060 7be651421710a85a9446e0b5e382c37c 313 SUPERFAMILY SSF46785 234 305 5.01E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3060 7be651421710a85a9446e0b5e382c37c 313 Gene3D G3DSA:1.10.10.10 232 303 2.2E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0690 3d3e97eb494bc54031d4256870dfee0e 639 SUPERFAMILY SSF56059 510 613 1.27E-8 T 14-10-2018 Amir_0690 3d3e97eb494bc54031d4256870dfee0e 639 Gene3D G3DSA:3.30.470.20 522 628 3.5E-8 T 14-10-2018 Amir_0203 2b30d0dda827e16dfbb136ae5d941570 197 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 100.566 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Amir_0203 2b30d0dda827e16dfbb136ae5d941570 197 SUPERFAMILY SSF111304 1 197 4.58E-70 T 14-10-2018 IPR023627 Recombination protein RecR Amir_0203 2b30d0dda827e16dfbb136ae5d941570 197 Pfam PF13662 Toprim domain 81 170 3.9E-24 T 14-10-2018 IPR006171 TOPRIM domain Amir_0203 2b30d0dda827e16dfbb136ae5d941570 197 TIGRFAM TIGR00615 recR: recombination protein RecR 2 195 5.1E-79 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Amir_0203 2b30d0dda827e16dfbb136ae5d941570 197 Gene3D G3DSA:1.10.8.420 1 51 2.1E-19 T 14-10-2018 Amir_0203 2b30d0dda827e16dfbb136ae5d941570 197 SMART SM00493 79 163 1.4E-15 T 14-10-2018 IPR006171 TOPRIM domain Amir_0203 2b30d0dda827e16dfbb136ae5d941570 197 Pfam PF02132 RecR protein 40 77 4.5E-15 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger Amir_0203 2b30d0dda827e16dfbb136ae5d941570 197 Gene3D G3DSA:3.40.1360.10 76 197 3.2E-43 T 14-10-2018 Amir_0203 2b30d0dda827e16dfbb136ae5d941570 197 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 Amir_3353 d533b5f4eedaebc46280ac03f800abf0 332 Pfam PF00753 Metallo-beta-lactamase superfamily 91 304 2.7E-34 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_3353 d533b5f4eedaebc46280ac03f800abf0 332 Gene3D G3DSA:3.60.15.10 22 329 4.0E-77 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_3353 d533b5f4eedaebc46280ac03f800abf0 332 SMART SM00849 90 304 3.0E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_3353 d533b5f4eedaebc46280ac03f800abf0 332 SUPERFAMILY SSF56281 61 316 3.93E-40 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_6967 5c780bb95777d43d2495867e1978acf6 612 SUPERFAMILY SSF101898 174 473 1.36E-23 T 14-10-2018 Amir_6967 5c780bb95777d43d2495867e1978acf6 612 Gene3D G3DSA:2.120.10.30 212 306 5.1E-6 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_6967 5c780bb95777d43d2495867e1978acf6 612 Gene3D G3DSA:3.40.30.10 8 166 1.1E-33 T 14-10-2018 Amir_6967 5c780bb95777d43d2495867e1978acf6 612 Pfam PF00578 AhpC/TSA family 17 136 1.6E-9 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amir_6967 5c780bb95777d43d2495867e1978acf6 612 Gene3D G3DSA:2.120.10.30 309 438 2.6E-21 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_6967 5c780bb95777d43d2495867e1978acf6 612 SUPERFAMILY SSF52833 27 178 1.21E-30 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_3974 95d17c2f658ec036cedfb9e4ef1384b0 219 Gene3D G3DSA:1.10.10.10 16 83 1.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3974 95d17c2f658ec036cedfb9e4ef1384b0 219 SUPERFAMILY SSF51306 98 217 2.27E-34 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Amir_3974 95d17c2f658ec036cedfb9e4ef1384b0 219 SUPERFAMILY SSF46785 18 82 8.16E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3974 95d17c2f658ec036cedfb9e4ef1384b0 219 TIGRFAM TIGR00498 lexA: repressor LexA 16 218 9.1E-63 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Amir_3974 95d17c2f658ec036cedfb9e4ef1384b0 219 Pfam PF00717 Peptidase S24-like 138 203 2.7E-14 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Amir_3974 95d17c2f658ec036cedfb9e4ef1384b0 219 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 174 186 8.4E-11 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Amir_3974 95d17c2f658ec036cedfb9e4ef1384b0 219 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 146 157 8.4E-11 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Amir_3974 95d17c2f658ec036cedfb9e4ef1384b0 219 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 135 145 8.4E-11 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Amir_3974 95d17c2f658ec036cedfb9e4ef1384b0 219 Pfam PF01726 LexA DNA binding domain 16 78 1.4E-19 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 Amir_3974 95d17c2f658ec036cedfb9e4ef1384b0 219 Gene3D G3DSA:2.10.109.10 104 219 2.7E-39 T 14-10-2018 Amir_3974 95d17c2f658ec036cedfb9e4ef1384b0 219 Hamap MF_00015 LexA repressor [lexA]. 17 219 30.388 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Amir_3182 d8a199d64c8db61a2dbd9c859367b8ae 313 Pfam PF04072 Leucine carboxyl methyltransferase 42 216 3.5E-49 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 Amir_3182 d8a199d64c8db61a2dbd9c859367b8ae 313 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 39 290 7.3E-81 T 14-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 Amir_3182 d8a199d64c8db61a2dbd9c859367b8ae 313 SUPERFAMILY SSF53335 38 296 2.24E-59 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3182 d8a199d64c8db61a2dbd9c859367b8ae 313 Gene3D G3DSA:3.40.50.150 36 310 9.9E-69 T 14-10-2018 Amir_0091 b94682a737b2d033907e6128ee0f6af5 219 Gene3D G3DSA:1.10.10.10 9 85 5.6E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0091 b94682a737b2d033907e6128ee0f6af5 219 Pfam PF09339 IclR helix-turn-helix domain 18 70 2.3E-11 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_0091 b94682a737b2d033907e6128ee0f6af5 219 SUPERFAMILY SSF55781 74 218 1.9E-18 T 14-10-2018 Amir_0091 b94682a737b2d033907e6128ee0f6af5 219 SMART SM00346 16 103 5.6E-15 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_0091 b94682a737b2d033907e6128ee0f6af5 219 Gene3D G3DSA:3.30.450.40 88 162 7.4E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_0091 b94682a737b2d033907e6128ee0f6af5 219 SUPERFAMILY SSF46785 18 87 1.38E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1326 ff060f7b3c230b6b564f73ee76f1ed4a 325 Gene3D G3DSA:3.40.47.10 179 325 2.1E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_1326 ff060f7b3c230b6b564f73ee76f1ed4a 325 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 11 324 57.981 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Amir_1326 ff060f7b3c230b6b564f73ee76f1ed4a 325 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 116 192 5.2E-25 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Amir_1326 ff060f7b3c230b6b564f73ee76f1ed4a 325 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 13 323 7.0E-100 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Amir_1326 ff060f7b3c230b6b564f73ee76f1ed4a 325 SUPERFAMILY SSF53901 7 324 6.07E-61 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_1326 ff060f7b3c230b6b564f73ee76f1ed4a 325 Gene3D G3DSA:3.40.47.10 2 178 3.1E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_1326 ff060f7b3c230b6b564f73ee76f1ed4a 325 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 232 323 4.2E-29 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Amir_5701 ec928888c38f250b96cf38f0218dcf35 411 SUPERFAMILY SSF53686 13 399 2.75E-144 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amir_5701 ec928888c38f250b96cf38f0218dcf35 411 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 12 401 50.591 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Amir_5701 ec928888c38f250b96cf38f0218dcf35 411 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 17 397 1.2E-180 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Amir_5701 ec928888c38f250b96cf38f0218dcf35 411 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 91 105 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Amir_5701 ec928888c38f250b96cf38f0218dcf35 411 Gene3D G3DSA:3.40.50.1100 64 394 1.2E-180 T 14-10-2018 Amir_5701 ec928888c38f250b96cf38f0218dcf35 411 Gene3D G3DSA:3.40.50.1100 20 216 1.2E-180 T 14-10-2018 Amir_5701 ec928888c38f250b96cf38f0218dcf35 411 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 62 388 1.8E-49 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amir_5701 ec928888c38f250b96cf38f0218dcf35 411 PIRSF PIRSF001413 2 406 1.8E-155 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Amir_3843 5ff70eff97e37c91c18a60e88a2c25cf 415 Gene3D G3DSA:3.40.50.720 1 195 3.4E-56 T 14-10-2018 Amir_3843 5ff70eff97e37c91c18a60e88a2c25cf 415 Gene3D G3DSA:3.40.50.720 198 408 2.5E-56 T 14-10-2018 Amir_3843 5ff70eff97e37c91c18a60e88a2c25cf 415 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 180 5.0E-34 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Amir_3843 5ff70eff97e37c91c18a60e88a2c25cf 415 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 318 390 1.3E-13 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Amir_3843 5ff70eff97e37c91c18a60e88a2c25cf 415 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 199 289 3.7E-27 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Amir_3843 5ff70eff97e37c91c18a60e88a2c25cf 415 SMART SM00984 317 409 7.9E-18 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Amir_3843 5ff70eff97e37c91c18a60e88a2c25cf 415 SUPERFAMILY SSF52413 303 407 1.44E-18 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Amir_3843 5ff70eff97e37c91c18a60e88a2c25cf 415 SUPERFAMILY SSF48179 199 296 2.99E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_3843 5ff70eff97e37c91c18a60e88a2c25cf 415 SUPERFAMILY SSF51735 6 193 6.12E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3843 5ff70eff97e37c91c18a60e88a2c25cf 415 PIRSF PIRSF500136 2 413 7.1E-129 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 Amir_3843 5ff70eff97e37c91c18a60e88a2c25cf 415 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 388 5.2E-114 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Amir_3843 5ff70eff97e37c91c18a60e88a2c25cf 415 PIRSF PIRSF000124 3 407 3.3E-56 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Amir_2228 eabb0c4f849a486672380ff3c3e33667 275 Gene3D G3DSA:3.10.330.20 2 68 1.2E-26 T 14-10-2018 Amir_2228 eabb0c4f849a486672380ff3c3e33667 275 SUPERFAMILY SSF53335 7 258 4.04E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_2228 eabb0c4f849a486672380ff3c3e33667 275 Gene3D G3DSA:3.40.50.150 70 263 6.2E-59 T 14-10-2018 Amir_2228 eabb0c4f849a486672380ff3c3e33667 275 Pfam PF14801 tRNA methyltransferase complex GCD14 subunit N-term 5 55 1.0E-29 T 14-10-2018 Amir_2228 eabb0c4f849a486672380ff3c3e33667 275 Pfam PF08704 tRNA methyltransferase complex GCD14 subunit 74 235 5.4E-20 T 14-10-2018 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 MetaCyc: PWY-6829 Amir_2228 eabb0c4f849a486672380ff3c3e33667 275 PIRSF PIRSF017269 2 269 3.4E-84 T 14-10-2018 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 MetaCyc: PWY-6829 Amir_3149 c1c604001c4a89158d8c806b13f72602 277 Pfam PF02517 CAAX protease self-immunity 114 213 6.4E-12 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Amir_3674 5de9d42a9cbec570d5d961605439499d 860 Pfam PF00881 Nitroreductase family 665 837 2.5E-12 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amir_3674 5de9d42a9cbec570d5d961605439499d 860 Pfam PF00550 Phosphopantetheine attachment site 542 598 6.9E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3674 5de9d42a9cbec570d5d961605439499d 860 Gene3D G3DSA:1.10.1200.10 526 605 4.6E-9 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3674 5de9d42a9cbec570d5d961605439499d 860 Gene3D G3DSA:3.40.50.12780 30 417 7.7E-53 T 14-10-2018 Amir_3674 5de9d42a9cbec570d5d961605439499d 860 Pfam PF13193 AMP-binding enzyme C-terminal domain 435 503 5.5E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3674 5de9d42a9cbec570d5d961605439499d 860 Gene3D G3DSA:3.40.109.10 659 844 6.5E-38 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_3674 5de9d42a9cbec570d5d961605439499d 860 SUPERFAMILY SSF56801 6 514 2.22E-70 T 14-10-2018 Amir_3674 5de9d42a9cbec570d5d961605439499d 860 SUPERFAMILY SSF47336 535 623 2.09E-11 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3674 5de9d42a9cbec570d5d961605439499d 860 SUPERFAMILY SSF55469 664 847 1.57E-15 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_3674 5de9d42a9cbec570d5d961605439499d 860 Gene3D G3DSA:3.30.300.30 421 517 1.0E-15 T 14-10-2018 Amir_3674 5de9d42a9cbec570d5d961605439499d 860 Pfam PF00501 AMP-binding enzyme 43 417 2.9E-34 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_6956 d50f0496d7fb5999ecdad88c137c138a 280 SUPERFAMILY SSF117074 27 121 2.75E-16 T 14-10-2018 Amir_6956 d50f0496d7fb5999ecdad88c137c138a 280 Pfam PF17210 SdrD B-like domain 35 121 5.8E-14 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_6956 d50f0496d7fb5999ecdad88c137c138a 280 Gene3D G3DSA:2.60.40.10 32 150 2.5E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_5505 d7133c545da7c494ff4a2ae0c05c69e5 357 SUPERFAMILY SSF160424 10 144 3.27E-21 T 14-10-2018 IPR036170 Probable antitoxin YezG superfamily Amir_4851 cf61799641f4505114cf5d5e0845b77e 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 2.4E-59 T 14-10-2018 Amir_4851 cf61799641f4505114cf5d5e0845b77e 254 Gene3D G3DSA:3.40.50.720 1 252 4.0E-45 T 14-10-2018 Amir_4851 cf61799641f4505114cf5d5e0845b77e 254 PIRSF PIRSF000094 1 254 3.2E-72 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Amir_4851 cf61799641f4505114cf5d5e0845b77e 254 SUPERFAMILY SSF51735 3 252 1.83E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3549 2cfb2bc47eef1754e7dd0fecdb5ebbdb 162 Gene3D G3DSA:3.40.630.30 3 146 3.2E-25 T 14-10-2018 Amir_3549 2cfb2bc47eef1754e7dd0fecdb5ebbdb 162 SUPERFAMILY SSF55729 4 146 7.77E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_3549 2cfb2bc47eef1754e7dd0fecdb5ebbdb 162 Pfam PF13673 Acetyltransferase (GNAT) domain 55 146 4.3E-10 T 14-10-2018 IPR000182 GNAT domain Amir_1307 6d209bef289053396bd93c2599e83b30 274 Pfam PF04672 S-adenosyl methyltransferase 9 273 5.3E-67 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type Amir_1307 6d209bef289053396bd93c2599e83b30 274 Gene3D G3DSA:3.40.50.150 2 274 8.0E-83 T 14-10-2018 Amir_1307 6d209bef289053396bd93c2599e83b30 274 PIRSF PIRSF017393 1 274 6.1E-70 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type Amir_1307 6d209bef289053396bd93c2599e83b30 274 SUPERFAMILY SSF53335 17 248 7.87E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_2167 d3a2571482f657df8785c93958f0b860 974 PRINTS PR00844 Glycosyl hydrolase family 48 signature 696 719 3.1E-97 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 Amir_2167 d3a2571482f657df8785c93958f0b860 974 PRINTS PR00844 Glycosyl hydrolase family 48 signature 742 768 3.1E-97 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 Amir_2167 d3a2571482f657df8785c93958f0b860 974 PRINTS PR00844 Glycosyl hydrolase family 48 signature 797 817 3.1E-97 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 Amir_2167 d3a2571482f657df8785c93958f0b860 974 PRINTS PR00844 Glycosyl hydrolase family 48 signature 626 645 3.1E-97 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 Amir_2167 d3a2571482f657df8785c93958f0b860 974 PRINTS PR00844 Glycosyl hydrolase family 48 signature 367 392 3.1E-97 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 Amir_2167 d3a2571482f657df8785c93958f0b860 974 PRINTS PR00844 Glycosyl hydrolase family 48 signature 393 410 3.1E-97 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 Amir_2167 d3a2571482f657df8785c93958f0b860 974 PRINTS PR00844 Glycosyl hydrolase family 48 signature 509 533 3.1E-97 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 Amir_2167 d3a2571482f657df8785c93958f0b860 974 PRINTS PR00844 Glycosyl hydrolase family 48 signature 554 581 3.1E-97 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 Amir_2167 d3a2571482f657df8785c93958f0b860 974 PRINTS PR00844 Glycosyl hydrolase family 48 signature 906 934 3.1E-97 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 Amir_2167 d3a2571482f657df8785c93958f0b860 974 SMART SM00637 40 139 2.5E-38 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_2167 d3a2571482f657df8785c93958f0b860 974 Gene3D G3DSA:2.60.40.290 33 141 1.5E-31 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_2167 d3a2571482f657df8785c93958f0b860 974 Gene3D G3DSA:2.170.160.10 428 658 2.2E-295 T 14-10-2018 IPR023309 Endoglucanase F, domain 2 Amir_2167 d3a2571482f657df8785c93958f0b860 974 Gene3D G3DSA:2.60.40.10 144 236 5.3E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2167 d3a2571482f657df8785c93958f0b860 974 Gene3D G3DSA:4.10.870.10 885 956 2.2E-295 T 14-10-2018 IPR027390 Endoglucanase F, domain 3 Amir_2167 d3a2571482f657df8785c93958f0b860 974 SUPERFAMILY SSF49384 39 140 7.67E-27 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_2167 d3a2571482f657df8785c93958f0b860 974 Gene3D G3DSA:1.50.10.10 342 973 2.2E-295 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Amir_2167 d3a2571482f657df8785c93958f0b860 974 Pfam PF00553 Cellulose binding domain 40 139 1.7E-28 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_2167 d3a2571482f657df8785c93958f0b860 974 SUPERFAMILY SSF48208 338 974 5.55E-277 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_2167 d3a2571482f657df8785c93958f0b860 974 Pfam PF02011 Glycosyl hydrolase family 48 341 973 0.0 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 Amir_5799 03da0dd28ed9b2a78aa126bb0f496a1c 194 Gene3D G3DSA:1.20.120.1760 10 187 1.5E-10 T 14-10-2018 Amir_5799 03da0dd28ed9b2a78aa126bb0f496a1c 194 PIRSF PIRSF000847 8 191 2.1E-46 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Amir_5799 03da0dd28ed9b2a78aa126bb0f496a1c 194 Pfam PF01066 CDP-alcohol phosphatidyltransferase 11 81 3.9E-14 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amir_5799 03da0dd28ed9b2a78aa126bb0f496a1c 194 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 11 180 1.1E-39 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Amir_5799 03da0dd28ed9b2a78aa126bb0f496a1c 194 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 59 81 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 PRINTS PR00132 Glycosyl hydrolase family 2 signature 498 513 5.5E-31 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 PRINTS PR00132 Glycosyl hydrolase family 2 signature 321 335 5.5E-31 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 PRINTS PR00132 Glycosyl hydrolase family 2 signature 352 370 5.5E-31 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 PRINTS PR00132 Glycosyl hydrolase family 2 signature 145 160 5.5E-31 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 PRINTS PR00132 Glycosyl hydrolase family 2 signature 426 441 5.5E-31 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 Gene3D G3DSA:2.60.120.260 25 217 1.3E-59 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 SMART SM01038 896 1163 3.3E-66 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 Pfam PF08305 NPCBM/NEW2 domain 1282 1421 3.6E-42 T 14-10-2018 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 SUPERFAMILY SSF49899 553 734 4.37E-27 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 SMART SM00776 1278 1423 2.9E-47 T 14-10-2018 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 SMART SM00560 597 730 2.6E-28 T 14-10-2018 IPR006558 LamG-like jellyroll fold Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 SUPERFAMILY SSF49785 33 217 2.19E-53 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 Gene3D G3DSA:2.60.120.200 581 769 5.2E-24 T 14-10-2018 Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 Gene3D G3DSA:3.20.20.80 311 574 2.8E-77 T 14-10-2018 Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 SUPERFAMILY SSF51445 312 546 2.83E-63 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 Gene3D G3DSA:2.60.40.10 219 310 1.1E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 SUPERFAMILY SSF49303 219 310 1.58E-17 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 582 732 4.4E-25 T 14-10-2018 Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 Gene3D G3DSA:2.60.120.1060 1277 1422 1.2E-39 T 14-10-2018 IPR038637 NPCBM domain superfamily Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 Pfam PF02929 Beta galactosidase small chain 898 1162 2.3E-57 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 Gene3D G3DSA:2.70.98.10 901 1167 2.1E-66 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 312 544 5.9E-65 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 Pfam PF00703 Glycosyl hydrolases family 2 219 310 7.3E-9 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 58 217 1.4E-37 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 SUPERFAMILY SSF49785 1283 1421 4.08E-36 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 SUPERFAMILY SSF49303 785 870 5.47E-8 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Amir_4634 749470880bb4c49bb87f282a4f29971c 1424 SUPERFAMILY SSF74650 883 1165 5.96E-60 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Amir_2378 14ec2125e70d52a5d2666946b2a49c9b 299 SUPERFAMILY SSF51735 4 220 1.85E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2378 14ec2125e70d52a5d2666946b2a49c9b 299 Pfam PF00106 short chain dehydrogenase 6 134 1.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2378 14ec2125e70d52a5d2666946b2a49c9b 299 Gene3D G3DSA:3.40.50.720 1 295 8.7E-43 T 14-10-2018 Amir_1970 497941d54991ad68121a0a6e9a2bc791 835 SMART SM00421 777 834 8.1E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1970 497941d54991ad68121a0a6e9a2bc791 835 Gene3D G3DSA:1.10.10.10 776 835 8.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1970 497941d54991ad68121a0a6e9a2bc791 835 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 780 794 1.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1970 497941d54991ad68121a0a6e9a2bc791 835 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 794 810 1.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1970 497941d54991ad68121a0a6e9a2bc791 835 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 810 822 1.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1970 497941d54991ad68121a0a6e9a2bc791 835 ProSitePatterns PS00622 LuxR-type HTH domain signature. 794 821 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1970 497941d54991ad68121a0a6e9a2bc791 835 SUPERFAMILY SSF46894 777 833 4.08E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_1970 497941d54991ad68121a0a6e9a2bc791 835 Gene3D G3DSA:1.25.40.10 343 674 5.9E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_1970 497941d54991ad68121a0a6e9a2bc791 835 Pfam PF00196 Bacterial regulatory proteins, luxR family 779 832 1.3E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1970 497941d54991ad68121a0a6e9a2bc791 835 SUPERFAMILY SSF52540 10 148 2.27E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5006 fa6a3c87e2b5cb751aea650d3f0fcee4 426 SMART SM00387 319 422 4.1E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5006 fa6a3c87e2b5cb751aea650d3f0fcee4 426 Pfam PF00512 His Kinase A (phospho-acceptor) domain 218 266 1.3E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_5006 fa6a3c87e2b5cb751aea650d3f0fcee4 426 SUPERFAMILY SSF47384 203 273 1.35E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_5006 fa6a3c87e2b5cb751aea650d3f0fcee4 426 SMART SM00388 217 275 0.0023 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_5006 fa6a3c87e2b5cb751aea650d3f0fcee4 426 SMART SM00304 164 216 1.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5006 fa6a3c87e2b5cb751aea650d3f0fcee4 426 Gene3D G3DSA:3.30.565.10 280 423 2.2E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5006 fa6a3c87e2b5cb751aea650d3f0fcee4 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 1.4E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5006 fa6a3c87e2b5cb751aea650d3f0fcee4 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 400 1.4E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5006 fa6a3c87e2b5cb751aea650d3f0fcee4 426 Gene3D G3DSA:1.10.287.130 168 275 8.6E-20 T 14-10-2018 Amir_5006 fa6a3c87e2b5cb751aea650d3f0fcee4 426 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 418 3.2E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5006 fa6a3c87e2b5cb751aea650d3f0fcee4 426 SUPERFAMILY SSF55874 280 418 6.68E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5006 fa6a3c87e2b5cb751aea650d3f0fcee4 426 Pfam PF00672 HAMP domain 171 211 9.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_1683 3ae2c224403d7c301414eb181a5a90bf 467 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 369 377 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site Amir_1683 3ae2c224403d7c301414eb181a5a90bf 467 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 21 35 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site Amir_1683 3ae2c224403d7c301414eb181a5a90bf 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 369 377 1.4E-19 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_1683 3ae2c224403d7c301414eb181a5a90bf 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 411 428 1.4E-19 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_1683 3ae2c224403d7c301414eb181a5a90bf 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 435 447 1.4E-19 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_1683 3ae2c224403d7c301414eb181a5a90bf 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 299 313 1.4E-19 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_1683 3ae2c224403d7c301414eb181a5a90bf 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 390 401 1.4E-19 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_1683 3ae2c224403d7c301414eb181a5a90bf 467 TIGRFAM TIGR03356 BGL: beta-galactosidase 18 457 2.5E-179 T 14-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 Amir_1683 3ae2c224403d7c301414eb181a5a90bf 467 Pfam PF00232 Glycosyl hydrolase family 1 16 463 3.7E-156 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_1683 3ae2c224403d7c301414eb181a5a90bf 467 Gene3D G3DSA:3.20.20.80 12 466 1.2E-168 T 14-10-2018 Amir_1683 3ae2c224403d7c301414eb181a5a90bf 467 SUPERFAMILY SSF51445 16 462 2.31E-152 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1013 b530a118f984f4b6cb0a32a280907f56 278 Gene3D G3DSA:2.120.10.30 2 278 1.3E-67 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_1013 b530a118f984f4b6cb0a32a280907f56 278 SUPERFAMILY SSF63829 7 270 3.24E-46 T 14-10-2018 Amir_1013 b530a118f984f4b6cb0a32a280907f56 278 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 229 247 2.6E-26 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Amir_1013 b530a118f984f4b6cb0a32a280907f56 278 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 87 108 2.6E-26 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Amir_1013 b530a118f984f4b6cb0a32a280907f56 278 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 14 31 2.6E-26 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Amir_1013 b530a118f984f4b6cb0a32a280907f56 278 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 128 150 2.6E-26 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Amir_1013 b530a118f984f4b6cb0a32a280907f56 278 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 187 204 2.6E-26 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Amir_1013 b530a118f984f4b6cb0a32a280907f56 278 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 13 248 8.6E-59 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 SUPERFAMILY SSF53067 1 163 3.5E-53 T 14-10-2018 Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 169 186 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 Hamap MF_00020 Acetate kinase [ackA]. 1 361 140.203 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 PRINTS PR00471 Acetate kinase family signature 288 304 4.6E-33 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 PRINTS PR00471 Acetate kinase family signature 3 14 4.6E-33 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 PRINTS PR00471 Acetate kinase family signature 169 190 4.6E-33 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 PRINTS PR00471 Acetate kinase family signature 142 155 4.6E-33 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 PRINTS PR00471 Acetate kinase family signature 266 279 4.6E-33 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 PRINTS PR00471 Acetate kinase family signature 342 354 4.6E-33 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 Pfam PF00871 Acetokinase family 51 355 5.5E-104 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 Gene3D G3DSA:3.30.420.40 166 361 5.9E-67 T 14-10-2018 Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 SUPERFAMILY SSF53067 125 359 7.77E-72 T 14-10-2018 Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 TIGRFAM TIGR00016 ackA: acetate kinase 50 356 6.3E-101 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 Gene3D G3DSA:3.30.420.40 1 163 2.5E-54 T 14-10-2018 Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 PIRSF PIRSF000722 36 361 1.5E-111 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_1919 e9469b3e1758ad442a1a32c13264de77 361 PIRSF PIRSF000722 1 41 0.0069 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amir_1492 b0260b56d729af4719189c471b3a8b0b 554 PIRSF PIRSF001394 33 551 6.6E-212 T 14-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 Amir_1492 b0260b56d729af4719189c471b3a8b0b 554 Gene3D G3DSA:3.20.130.10 354 541 3.0E-58 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Amir_1492 b0260b56d729af4719189c471b3a8b0b 554 Pfam PF05683 Fumarase C-terminus 337 542 1.2E-91 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Amir_1492 b0260b56d729af4719189c471b3a8b0b 554 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 379 542 3.5E-56 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Amir_1492 b0260b56d729af4719189c471b3a8b0b 554 Pfam PF05681 Fumarate hydratase (Fumerase) 54 331 5.2E-81 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Amir_1492 b0260b56d729af4719189c471b3a8b0b 554 ProSitePatterns PS00163 Fumarate lyases signature. 461 470 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Amir_1492 b0260b56d729af4719189c471b3a8b0b 554 SUPERFAMILY SSF117457 366 540 9.02E-61 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Amir_2703 2cf47c6c5f739495e131ee710b22ad8d 586 SUPERFAMILY SSF117074 178 254 4.84E-11 T 14-10-2018 Amir_2703 2cf47c6c5f739495e131ee710b22ad8d 586 SUPERFAMILY SSF117074 69 139 7.72E-12 T 14-10-2018 Amir_2703 2cf47c6c5f739495e131ee710b22ad8d 586 Gene3D G3DSA:2.60.40.10 48 181 6.6E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2703 2cf47c6c5f739495e131ee710b22ad8d 586 Gene3D G3DSA:2.60.40.10 384 509 2.4E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2703 2cf47c6c5f739495e131ee710b22ad8d 586 Gene3D G3DSA:2.60.40.10 182 268 4.4E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2703 2cf47c6c5f739495e131ee710b22ad8d 586 Gene3D G3DSA:2.60.40.10 290 383 1.2E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2703 2cf47c6c5f739495e131ee710b22ad8d 586 SUPERFAMILY SSF117074 386 468 1.19E-10 T 14-10-2018 Amir_2703 2cf47c6c5f739495e131ee710b22ad8d 586 SUPERFAMILY SSF117074 291 364 9.81E-14 T 14-10-2018 Amir_2703 2cf47c6c5f739495e131ee710b22ad8d 586 Pfam PF17210 SdrD B-like domain 69 150 1.3E-7 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2703 2cf47c6c5f739495e131ee710b22ad8d 586 Pfam PF17210 SdrD B-like domain 186 252 4.7E-8 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2703 2cf47c6c5f739495e131ee710b22ad8d 586 Pfam PF17210 SdrD B-like domain 291 365 5.2E-11 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_2703 2cf47c6c5f739495e131ee710b22ad8d 586 Pfam PF17210 SdrD B-like domain 389 470 8.3E-11 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_1038 40313809b1854eff5bbca2a94936fe70 987 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 105 129 3.2E-58 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Amir_1038 40313809b1854eff5bbca2a94936fe70 987 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 131 151 3.2E-58 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Amir_1038 40313809b1854eff5bbca2a94936fe70 987 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 53 68 3.2E-58 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Amir_1038 40313809b1854eff5bbca2a94936fe70 987 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 154 169 3.2E-58 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Amir_1038 40313809b1854eff5bbca2a94936fe70 987 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 74 94 3.2E-58 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Amir_1038 40313809b1854eff5bbca2a94936fe70 987 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 239 255 3.2E-58 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Amir_1038 40313809b1854eff5bbca2a94936fe70 987 SUPERFAMILY SSF55681 2 278 8.2E-111 T 14-10-2018 Amir_1038 40313809b1854eff5bbca2a94936fe70 987 SUPERFAMILY SSF109604 647 799 9.42E-10 T 14-10-2018 Amir_1038 40313809b1854eff5bbca2a94936fe70 987 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 306 977 2.4E-158 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Amir_1038 40313809b1854eff5bbca2a94936fe70 987 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 1 277 1.2E-129 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Amir_1038 40313809b1854eff5bbca2a94936fe70 987 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 305 985 20.793 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Amir_1038 40313809b1854eff5bbca2a94936fe70 987 Gene3D G3DSA:1.20.58.180 203 283 2.5E-29 T 14-10-2018 Amir_1038 40313809b1854eff5bbca2a94936fe70 987 Gene3D G3DSA:3.30.930.10 1 202 1.8E-99 T 14-10-2018 Amir_1038 40313809b1854eff5bbca2a94936fe70 987 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 279 50.436 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Amir_1038 40313809b1854eff5bbca2a94936fe70 987 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 308 857 4.2E-171 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Amir_1038 40313809b1854eff5bbca2a94936fe70 987 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 1 284 1.2E-122 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Amir_5187 9507ba527b0204cdc25c3f294fa6a1ba 370 Gene3D G3DSA:3.20.20.70 4 366 1.9E-155 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5187 9507ba527b0204cdc25c3f294fa6a1ba 370 SUPERFAMILY SSF51569 6 362 2.56E-75 T 14-10-2018 Amir_5187 9507ba527b0204cdc25c3f294fa6a1ba 370 Hamap MF_00493 Transaldolase [tal]. 1 370 155.89 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Amir_5187 9507ba527b0204cdc25c3f294fa6a1ba 370 ProSitePatterns PS01054 Transaldolase signature 1. 42 50 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Amir_5187 9507ba527b0204cdc25c3f294fa6a1ba 370 TIGRFAM TIGR00876 tal_mycobact: transaldolase 12 359 2.7E-136 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Amir_5187 9507ba527b0204cdc25c3f294fa6a1ba 370 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 16 360 9.0E-78 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Amir_5187 9507ba527b0204cdc25c3f294fa6a1ba 370 PIRSF PIRSF036915 1 370 1.8E-165 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Amir_4170 9524cdfc9f591c82f27048590d5a23c6 239 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 10 217 2.0E-29 T 14-10-2018 IPR010843 Uncharacterised protein family AroM Amir_4170 9524cdfc9f591c82f27048590d5a23c6 239 Pfam PF07302 AroM protein 11 233 1.7E-78 T 14-10-2018 IPR010843 Uncharacterised protein family AroM Amir_4170 9524cdfc9f591c82f27048590d5a23c6 239 Gene3D G3DSA:3.40.50.1860 125 219 1.4E-5 T 14-10-2018 Amir_4170 9524cdfc9f591c82f27048590d5a23c6 239 Gene3D G3DSA:3.40.50.1860 79 124 1.4E-5 T 14-10-2018 Amir_1039 2851e088f5125e8fe8d1d5810d20ff63 575 PRINTS PR00723 Subtilisin serine protease family (S8) signature 475 491 8.4E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1039 2851e088f5125e8fe8d1d5810d20ff63 575 PRINTS PR00723 Subtilisin serine protease family (S8) signature 164 183 8.4E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1039 2851e088f5125e8fe8d1d5810d20ff63 575 PRINTS PR00723 Subtilisin serine protease family (S8) signature 224 237 8.4E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1039 2851e088f5125e8fe8d1d5810d20ff63 575 Gene3D G3DSA:3.40.50.200 130 570 3.3E-74 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_1039 2851e088f5125e8fe8d1d5810d20ff63 575 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 228 238 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Amir_1039 2851e088f5125e8fe8d1d5810d20ff63 575 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 476 486 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_1039 2851e088f5125e8fe8d1d5810d20ff63 575 SUPERFAMILY SSF52743 147 569 2.49E-60 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_1039 2851e088f5125e8fe8d1d5810d20ff63 575 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 169 180 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_1039 2851e088f5125e8fe8d1d5810d20ff63 575 Pfam PF00082 Subtilase family 165 523 2.0E-40 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_3859 00dcb349ec511a87f82187f4ebd3684e 261 SMART SM01043 113 258 4.1E-25 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_3859 00dcb349ec511a87f82187f4ebd3684e 261 Pfam PF03704 Bacterial transcriptional activator domain 113 258 4.2E-25 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_3859 00dcb349ec511a87f82187f4ebd3684e 261 SUPERFAMILY SSF46894 30 106 1.59E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_3859 00dcb349ec511a87f82187f4ebd3684e 261 SMART SM00862 30 106 3.5E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_3859 00dcb349ec511a87f82187f4ebd3684e 261 SUPERFAMILY SSF48452 108 259 1.02E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3859 00dcb349ec511a87f82187f4ebd3684e 261 Gene3D G3DSA:1.10.10.10 4 109 6.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3859 00dcb349ec511a87f82187f4ebd3684e 261 Gene3D G3DSA:1.25.40.10 111 261 1.1E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3859 00dcb349ec511a87f82187f4ebd3684e 261 Pfam PF00486 Transcriptional regulatory protein, C terminal 37 106 2.2E-8 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_3403 1773b203145d46af6aa9a4b26aa78869 114 Hamap MF_01483 RNA polymerase-binding protein RbpA [rbpA]. 16 112 24.209 T 14-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 Amir_3403 1773b203145d46af6aa9a4b26aa78869 114 Pfam PF13397 RNA polymerase-binding protein 4 107 1.3E-42 T 14-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 Amir_3403 1773b203145d46af6aa9a4b26aa78869 114 Gene3D G3DSA:2.20.28.270 1 80 1.0E-37 T 14-10-2018 IPR038638 RbpA superfamily Amir_4849 4365c510ffadfb4525472f3dbb9ec0a4 203 Gene3D G3DSA:3.40.50.1950 11 183 7.7E-32 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Amir_4849 4365c510ffadfb4525472f3dbb9ec0a4 203 Pfam PF02441 Flavoprotein 14 191 1.1E-23 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Amir_4849 4365c510ffadfb4525472f3dbb9ec0a4 203 SUPERFAMILY SSF52507 11 161 1.83E-30 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Amir_1709 bf7cad269961c5f1a3a8dda203a06f89 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 1.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1709 bf7cad269961c5f1a3a8dda203a06f89 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1709 bf7cad269961c5f1a3a8dda203a06f89 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 2.2E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1709 bf7cad269961c5f1a3a8dda203a06f89 195 Gene3D G3DSA:1.10.357.10 8 193 3.2E-24 T 14-10-2018 Amir_1709 bf7cad269961c5f1a3a8dda203a06f89 195 SUPERFAMILY SSF46689 6 84 5.08E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_6542 a39b94c14f0b132fd6ba2343ae15bc11 111 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 14 105 18.143 T 14-10-2018 IPR003482 Transcription factor WhiB Amir_6542 a39b94c14f0b132fd6ba2343ae15bc11 111 Pfam PF02467 Transcription factor WhiB 30 98 9.3E-23 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain Amir_5585 92ec9922ff024a5a4327f31ba517d445 314 Gene3D G3DSA:3.40.50.450 1 295 2.8E-72 T 14-10-2018 Amir_5585 92ec9922ff024a5a4327f31ba517d445 314 Pfam PF02481 DNA recombination-mediator protein A 78 272 4.7E-63 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Amir_5585 92ec9922ff024a5a4327f31ba517d445 314 SUPERFAMILY SSF102405 87 293 4.73E-34 T 14-10-2018 Amir_6659 05dea1703141c82854487704c4c6dddf 347 SUPERFAMILY SSF46785 29 127 1.63E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6659 05dea1703141c82854487704c4c6dddf 347 Gene3D G3DSA:1.10.10.10 26 114 1.3E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6659 05dea1703141c82854487704c4c6dddf 347 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 30 95 8.9E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3756 7fef55bf91baab3ceb7966efdc1abb01 581 Gene3D G3DSA:3.40.50.300 329 576 1.5E-74 T 14-10-2018 Amir_3756 7fef55bf91baab3ceb7966efdc1abb01 581 Pfam PF00005 ABC transporter 355 503 5.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3756 7fef55bf91baab3ceb7966efdc1abb01 581 SUPERFAMILY SSF52540 329 574 4.22E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3756 7fef55bf91baab3ceb7966efdc1abb01 581 Pfam PF00664 ABC transporter transmembrane region 22 292 3.8E-46 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_3756 7fef55bf91baab3ceb7966efdc1abb01 581 Gene3D G3DSA:1.20.1560.10 2 319 1.3E-80 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_3756 7fef55bf91baab3ceb7966efdc1abb01 581 SUPERFAMILY SSF90123 10 318 3.92E-70 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_3756 7fef55bf91baab3ceb7966efdc1abb01 581 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3756 7fef55bf91baab3ceb7966efdc1abb01 581 SMART SM00382 364 550 2.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1134 80a93c2f7315f86aabd3c7492fa9d379 531 Gene3D G3DSA:3.90.400.10 117 189 9.0E-154 T 14-10-2018 Amir_1134 80a93c2f7315f86aabd3c7492fa9d379 531 Pfam PF00128 Alpha amylase, catalytic domain 40 383 1.0E-80 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_1134 80a93c2f7315f86aabd3c7492fa9d379 531 SMART SM00642 25 408 3.1E-115 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_1134 80a93c2f7315f86aabd3c7492fa9d379 531 Gene3D G3DSA:3.20.20.80 17 463 9.0E-154 T 14-10-2018 Amir_1134 80a93c2f7315f86aabd3c7492fa9d379 531 Pfam PF11941 Domain of unknown function (DUF3459) 454 530 2.7E-7 T 14-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) Amir_1134 80a93c2f7315f86aabd3c7492fa9d379 531 SUPERFAMILY SSF51445 16 465 2.08E-120 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_5257 54c22ad27cb76140ff640633a919dd9c 152 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 4 126 6.4E-41 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 Amir_5257 54c22ad27cb76140ff640633a919dd9c 152 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 6 123 1.1E-30 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 Amir_5257 54c22ad27cb76140ff640633a919dd9c 152 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 67 79 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 Amir_5257 54c22ad27cb76140ff640633a919dd9c 152 SUPERFAMILY SSF51261 4 149 3.31E-38 T 14-10-2018 IPR011055 Duplicated hybrid motif Amir_5257 54c22ad27cb76140ff640633a919dd9c 152 Gene3D G3DSA:2.70.70.10 1 152 1.3E-42 T 14-10-2018 IPR011055 Duplicated hybrid motif Amir_0347 778c0155aac9ddf585f9a69410350c96 347 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 Amir_0347 778c0155aac9ddf585f9a69410350c96 347 SUPERFAMILY SSF47413 3 48 6.75E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_0347 778c0155aac9ddf585f9a69410350c96 347 Gene3D G3DSA:3.40.50.2300 171 299 8.9E-76 T 14-10-2018 Amir_0347 778c0155aac9ddf585f9a69410350c96 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 47 4.7E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_0347 778c0155aac9ddf585f9a69410350c96 347 SMART SM00354 1 68 4.6E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_0347 778c0155aac9ddf585f9a69410350c96 347 Pfam PF13377 Periplasmic binding protein-like domain 179 343 3.7E-38 T 14-10-2018 Amir_0347 778c0155aac9ddf585f9a69410350c96 347 Gene3D G3DSA:1.10.260.40 2 53 7.4E-17 T 14-10-2018 Amir_0347 778c0155aac9ddf585f9a69410350c96 347 SUPERFAMILY SSF53822 58 346 2.94E-69 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_0347 778c0155aac9ddf585f9a69410350c96 347 Gene3D G3DSA:3.40.50.2300 54 314 8.9E-76 T 14-10-2018 Amir_3448 2dbd2c99885d65f978b78857611e60ee 281 Gene3D G3DSA:1.10.10.60 173 264 1.8E-15 T 14-10-2018 Amir_3448 2dbd2c99885d65f978b78857611e60ee 281 SMART SM00342 174 258 8.2E-5 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_3448 2dbd2c99885d65f978b78857611e60ee 281 Pfam PF12833 Helix-turn-helix domain 180 258 1.1E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_5290 464b75666a943caf890c2e66c24f7f11 127 Gene3D G3DSA:1.10.10.10 5 126 8.5E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5290 464b75666a943caf890c2e66c24f7f11 127 Pfam PF01638 HxlR-like helix-turn-helix 28 112 5.9E-24 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type Amir_5290 464b75666a943caf890c2e66c24f7f11 127 SUPERFAMILY SSF46785 16 123 5.46E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1937 f41c95d4b2bf06e33ec7ef8ce3354a76 201 SMART SM00421 138 195 1.1E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1937 f41c95d4b2bf06e33ec7ef8ce3354a76 201 Gene3D G3DSA:3.40.50.12740 2 200 1.3E-57 T 14-10-2018 Amir_1937 f41c95d4b2bf06e33ec7ef8ce3354a76 201 Pfam PF00072 Response regulator receiver domain 4 116 8.6E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1937 f41c95d4b2bf06e33ec7ef8ce3354a76 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 195 7.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1937 f41c95d4b2bf06e33ec7ef8ce3354a76 201 SUPERFAMILY SSF46894 132 201 9.86E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_1937 f41c95d4b2bf06e33ec7ef8ce3354a76 201 SUPERFAMILY SSF52172 2 129 1.05E-31 T 14-10-2018 IPR011006 CheY-like superfamily Amir_1937 f41c95d4b2bf06e33ec7ef8ce3354a76 201 SMART SM00448 2 115 2.7E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1937 f41c95d4b2bf06e33ec7ef8ce3354a76 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 9.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1937 f41c95d4b2bf06e33ec7ef8ce3354a76 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 9.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1937 f41c95d4b2bf06e33ec7ef8ce3354a76 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 9.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2416 3975fc4e916a22d4896e6ed7e462530c 277 Pfam PF00582 Universal stress protein family 3 133 5.7E-24 T 14-10-2018 IPR006016 UspA Amir_2416 3975fc4e916a22d4896e6ed7e462530c 277 Pfam PF00582 Universal stress protein family 142 266 3.5E-17 T 14-10-2018 IPR006016 UspA Amir_2416 3975fc4e916a22d4896e6ed7e462530c 277 Gene3D G3DSA:3.40.50.12370 2 267 3.3E-68 T 14-10-2018 Amir_2416 3975fc4e916a22d4896e6ed7e462530c 277 SUPERFAMILY SSF52402 151 266 6.36E-20 T 14-10-2018 Amir_2416 3975fc4e916a22d4896e6ed7e462530c 277 SUPERFAMILY SSF52402 3 138 7.28E-28 T 14-10-2018 Amir_2416 3975fc4e916a22d4896e6ed7e462530c 277 PRINTS PR01438 Universal stress protein signature 1 18 1.5E-15 T 14-10-2018 IPR006015 Universal stress protein A Amir_2416 3975fc4e916a22d4896e6ed7e462530c 277 PRINTS PR01438 Universal stress protein signature 93 105 1.5E-15 T 14-10-2018 IPR006015 Universal stress protein A Amir_2416 3975fc4e916a22d4896e6ed7e462530c 277 PRINTS PR01438 Universal stress protein signature 111 133 1.5E-15 T 14-10-2018 IPR006015 Universal stress protein A Amir_7027 c4577b7e84da60b894487a468b500bba 677 SUPERFAMILY SSF63829 319 585 1.7E-8 T 14-10-2018 Amir_7027 c4577b7e84da60b894487a468b500bba 677 Pfam PF05787 Bacterial protein of unknown function (DUF839) 87 634 1.2E-167 T 14-10-2018 IPR008557 Protein of unknown function DUF839 Amir_6876 545d1a9efc65a054f5ebbf506c801e09 752 PIRSF PIRSF001587 9 752 1.6E-283 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amir_6876 545d1a9efc65a054f5ebbf506c801e09 752 Pfam PF02769 AIR synthase related protein, C-terminal domain 212 369 2.5E-33 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Amir_6876 545d1a9efc65a054f5ebbf506c801e09 752 Pfam PF02769 AIR synthase related protein, C-terminal domain 588 724 4.0E-18 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Amir_6876 545d1a9efc65a054f5ebbf506c801e09 752 SUPERFAMILY SSF55326 420 581 2.36E-54 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amir_6876 545d1a9efc65a054f5ebbf506c801e09 752 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 752 306.883 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amir_6876 545d1a9efc65a054f5ebbf506c801e09 752 Pfam PF00586 AIR synthase related protein, N-terminal domain 469 574 7.7E-25 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Amir_6876 545d1a9efc65a054f5ebbf506c801e09 752 Pfam PF00586 AIR synthase related protein, N-terminal domain 97 198 4.0E-22 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Amir_6876 545d1a9efc65a054f5ebbf506c801e09 752 Gene3D G3DSA:3.30.1330.10 403 578 4.4E-56 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amir_6876 545d1a9efc65a054f5ebbf506c801e09 752 SUPERFAMILY SSF55326 18 202 9.12E-49 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amir_6876 545d1a9efc65a054f5ebbf506c801e09 752 SUPERFAMILY SSF56042 587 751 6.58E-33 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amir_6876 545d1a9efc65a054f5ebbf506c801e09 752 Gene3D G3DSA:3.30.1330.10 49 203 3.2E-124 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amir_6876 545d1a9efc65a054f5ebbf506c801e09 752 SUPERFAMILY SSF56042 211 441 1.47E-52 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amir_6876 545d1a9efc65a054f5ebbf506c801e09 752 Gene3D G3DSA:3.90.650.10 587 752 2.0E-34 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amir_6876 545d1a9efc65a054f5ebbf506c801e09 752 Gene3D G3DSA:3.90.650.10 35 378 3.2E-124 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amir_6876 545d1a9efc65a054f5ebbf506c801e09 752 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 23 748 2.6E-253 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amir_4274 881b2230a410541b674edce54b04b47f 227 Pfam PF10067 Predicted membrane protein (DUF2306) 58 204 2.6E-34 T 14-10-2018 IPR018750 Protein of unknown function DUF2306, membrane Amir_6050 d52e2733d200c45054882a11250adc3d 319 SUPERFAMILY SSF52467 192 313 1.85E-48 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amir_6050 d52e2733d200c45054882a11250adc3d 319 SMART SM00893 4 182 7.4E-23 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amir_6050 d52e2733d200c45054882a11250adc3d 319 Gene3D G3DSA:3.40.50.1220 189 319 1.2E-57 T 14-10-2018 Amir_6050 d52e2733d200c45054882a11250adc3d 319 SUPERFAMILY SSF52402 4 183 3.14E-38 T 14-10-2018 Amir_6050 d52e2733d200c45054882a11250adc3d 319 Pfam PF01012 Electron transfer flavoprotein domain 4 175 3.6E-29 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amir_6050 d52e2733d200c45054882a11250adc3d 319 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 258 284 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 Amir_6050 d52e2733d200c45054882a11250adc3d 319 Gene3D G3DSA:3.40.50.620 2 187 2.4E-35 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_6050 d52e2733d200c45054882a11250adc3d 319 PIRSF PIRSF000089 1 319 5.0E-101 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Amir_6050 d52e2733d200c45054882a11250adc3d 319 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 195 277 2.8E-36 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Amir_3283 1b3c18cfd03567d5335240747c772a48 669 Pfam PF02543 Carbamoyltransferase N-terminus 24 341 1.5E-53 T 14-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 Amir_3283 1b3c18cfd03567d5335240747c772a48 669 Gene3D G3DSA:3.30.420.350 132 335 1.1E-83 T 14-10-2018 Amir_3283 1b3c18cfd03567d5335240747c772a48 669 Pfam PF16861 Carbamoyltransferase C-terminus 397 568 3.0E-62 T 14-10-2018 IPR031730 Carbamoyltransferase, C-terminal Amir_3283 1b3c18cfd03567d5335240747c772a48 669 SUPERFAMILY SSF53067 31 347 5.04E-14 T 14-10-2018 Amir_3283 1b3c18cfd03567d5335240747c772a48 669 Gene3D G3DSA:3.90.870.20 359 568 5.6E-69 T 14-10-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily Amir_3283 1b3c18cfd03567d5335240747c772a48 669 Gene3D G3DSA:3.30.420.40 26 342 1.1E-83 T 14-10-2018 Amir_0360 6e60ffe0ec6457a1878aacc970951e6c 464 Gene3D G3DSA:1.20.120.640 304 462 2.7E-34 T 14-10-2018 Amir_0360 6e60ffe0ec6457a1878aacc970951e6c 464 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 21 309 4.0E-114 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Amir_0360 6e60ffe0ec6457a1878aacc970951e6c 464 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 459 2.6E-128 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Amir_0360 6e60ffe0ec6457a1878aacc970951e6c 464 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 462 34.634 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Amir_0360 6e60ffe0ec6457a1878aacc970951e6c 464 Gene3D G3DSA:3.40.50.620 1 302 2.1E-118 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_0360 6e60ffe0ec6457a1878aacc970951e6c 464 SUPERFAMILY SSF47323 314 461 1.01E-30 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_0360 6e60ffe0ec6457a1878aacc970951e6c 464 SUPERFAMILY SSF52374 4 309 4.29E-83 T 14-10-2018 Amir_0360 6e60ffe0ec6457a1878aacc970951e6c 464 SMART SM00840 339 400 7.7E-12 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Amir_0360 6e60ffe0ec6457a1878aacc970951e6c 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 189 207 9.5E-26 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Amir_0360 6e60ffe0ec6457a1878aacc970951e6c 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 9.5E-26 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Amir_0360 6e60ffe0ec6457a1878aacc970951e6c 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 220 241 9.5E-26 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Amir_0360 6e60ffe0ec6457a1878aacc970951e6c 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 9.5E-26 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Amir_0360 6e60ffe0ec6457a1878aacc970951e6c 464 Pfam PF09190 DALR domain 340 392 3.3E-9 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Amir_4598 8647bb73e9adc43460c1619c8077593e 376 Gene3D G3DSA:3.20.20.70 16 368 5.4E-129 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_4598 8647bb73e9adc43460c1619c8077593e 376 SUPERFAMILY SSF51395 17 362 9.16E-91 T 14-10-2018 Amir_4598 8647bb73e9adc43460c1619c8077593e 376 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 263 269 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Amir_4598 8647bb73e9adc43460c1619c8077593e 376 PIRSF PIRSF000138 3 369 6.1E-123 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Amir_4598 8647bb73e9adc43460c1619c8077593e 376 Pfam PF01070 FMN-dependent dehydrogenase 24 359 1.0E-125 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Amir_0663 788e09a15e68c4f82f647da7edbcb654 367 SUPERFAMILY SSF50952 37 364 2.22E-34 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Amir_0663 788e09a15e68c4f82f647da7edbcb654 367 Pfam PF07995 Glucose / Sorbosone dehydrogenase 50 358 1.0E-56 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase Amir_0663 788e09a15e68c4f82f647da7edbcb654 367 Gene3D G3DSA:2.120.10.30 29 366 1.3E-69 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_7054 fadfb8efff4b2b6ca4b039d832952d8c 381 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 288 373 1.7E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_7054 fadfb8efff4b2b6ca4b039d832952d8c 381 SUPERFAMILY SSF55874 270 379 2.23E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_7054 fadfb8efff4b2b6ca4b039d832952d8c 381 Gene3D G3DSA:3.30.565.10 257 379 1.8E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_7098 fedfc9872dbedf4b907c7a715b890c71 89 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 10 78 24.888 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Amir_7098 fedfc9872dbedf4b907c7a715b890c71 89 SMART SM01234 10 77 3.4E-44 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Amir_7098 fedfc9872dbedf4b907c7a715b890c71 89 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 25 77 4.0E-18 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Amir_7098 fedfc9872dbedf4b907c7a715b890c71 89 Pfam PF01809 Haemolytic domain 12 77 3.6E-29 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Amir_7098 fedfc9872dbedf4b907c7a715b890c71 89 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 15 81 1.5E-28 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Amir_0705 cb0ee9e9760729afb28147784a9de565 393 Gene3D G3DSA:3.10.180.10 189 393 2.6E-78 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_0705 cb0ee9e9760729afb28147784a9de565 393 PIRSF PIRSF009283 22 393 4.3E-131 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 Amir_0705 cb0ee9e9760729afb28147784a9de565 393 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 33 393 2.0E-128 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 Amir_0705 cb0ee9e9760729afb28147784a9de565 393 Gene3D G3DSA:3.10.180.10 20 185 3.8E-49 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_0705 cb0ee9e9760729afb28147784a9de565 393 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 204 347 1.7E-13 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amir_0705 cb0ee9e9760729afb28147784a9de565 393 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 35 143 2.8E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amir_0705 cb0ee9e9760729afb28147784a9de565 393 SUPERFAMILY SSF54593 27 380 5.05E-89 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_0101 34a3fa673e54ba2d0ddeb02b93b95a62 203 SUPERFAMILY SSF53254 2 197 2.36E-44 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_0101 34a3fa673e54ba2d0ddeb02b93b95a62 203 Gene3D G3DSA:3.40.50.1240 1 190 4.1E-40 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_0101 34a3fa673e54ba2d0ddeb02b93b95a62 203 PIRSF PIRSF000709 2 168 3.7E-6 T 14-10-2018 Amir_0101 34a3fa673e54ba2d0ddeb02b93b95a62 203 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 196 4.3E-46 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_0101 34a3fa673e54ba2d0ddeb02b93b95a62 203 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Amir_0101 34a3fa673e54ba2d0ddeb02b93b95a62 203 SMART SM00855 2 158 8.4E-17 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_0899 42ce4c245e3921e7f2907d3d5e6f6860 247 Gene3D G3DSA:3.40.50.300 27 105 1.8E-7 T 14-10-2018 Amir_0899 42ce4c245e3921e7f2907d3d5e6f6860 247 SUPERFAMILY SSF52540 35 203 3.77E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0899 42ce4c245e3921e7f2907d3d5e6f6860 247 Gene3D G3DSA:3.40.50.300 109 216 6.0E-12 T 14-10-2018 Amir_0899 42ce4c245e3921e7f2907d3d5e6f6860 247 SMART SM00382 38 232 1.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0899 42ce4c245e3921e7f2907d3d5e6f6860 247 Pfam PF13476 AAA domain 33 60 2.1E-7 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain Amir_4130 36d22983d944c3555cc294f08d73d938 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 14-10-2018 Amir_4130 36d22983d944c3555cc294f08d73d938 344 Gene3D G3DSA:3.40.50.2300 85 315 3.8E-63 T 14-10-2018 Amir_4130 36d22983d944c3555cc294f08d73d938 344 Pfam PF13377 Periplasmic binding protein-like domain 180 339 1.1E-35 T 14-10-2018 Amir_4130 36d22983d944c3555cc294f08d73d938 344 SMART SM00354 8 78 2.0E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_4130 36d22983d944c3555cc294f08d73d938 344 SUPERFAMILY SSF53822 82 342 5.89E-55 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_4130 36d22983d944c3555cc294f08d73d938 344 Gene3D G3DSA:3.40.50.2300 172 299 3.8E-63 T 14-10-2018 Amir_4130 36d22983d944c3555cc294f08d73d938 344 Gene3D G3DSA:1.10.260.40 3 66 1.5E-19 T 14-10-2018 Amir_4130 36d22983d944c3555cc294f08d73d938 344 SUPERFAMILY SSF47413 8 64 2.16E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_4130 36d22983d944c3555cc294f08d73d938 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 9.4E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_2397 5957b9774dfae029985f12784bcb3951 341 Gene3D G3DSA:3.20.20.30 16 329 9.0E-52 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_2397 5957b9774dfae029985f12784bcb3951 341 Pfam PF00296 Luciferase-like monooxygenase 29 295 2.8E-28 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_2397 5957b9774dfae029985f12784bcb3951 341 SUPERFAMILY SSF51679 14 326 2.49E-48 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_6168 a4f83043bbd5cdd31774874e6b02d362 139 SMART SM00530 22 76 0.0027 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_6168 a4f83043bbd5cdd31774874e6b02d362 139 SUPERFAMILY SSF47413 27 77 1.13E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_6168 a4f83043bbd5cdd31774874e6b02d362 139 Pfam PF01381 Helix-turn-helix 31 75 4.1E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_6168 a4f83043bbd5cdd31774874e6b02d362 139 Gene3D G3DSA:1.10.260.40 24 121 8.3E-7 T 14-10-2018 Amir_6663 13412335af9f1609c6fb4dd2e55650e5 253 Gene3D G3DSA:3.90.226.10 1 249 9.8E-59 T 14-10-2018 Amir_6663 13412335af9f1609c6fb4dd2e55650e5 253 SUPERFAMILY SSF52096 2 242 9.79E-59 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_6663 13412335af9f1609c6fb4dd2e55650e5 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 227 3.3E-46 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Amir_0795 91d44c94db4a210e7d7db143f83de59f 194 SUPERFAMILY SSF88946 27 108 1.53E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_0795 91d44c94db4a210e7d7db143f83de59f 194 Gene3D G3DSA:1.10.10.10 103 188 8.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0795 91d44c94db4a210e7d7db143f83de59f 194 SUPERFAMILY SSF88659 106 186 8.22E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_0795 91d44c94db4a210e7d7db143f83de59f 194 Pfam PF08281 Sigma-70, region 4 129 179 3.3E-17 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_0795 91d44c94db4a210e7d7db143f83de59f 194 Gene3D G3DSA:1.10.1740.10 21 97 1.4E-25 T 14-10-2018 Amir_0795 91d44c94db4a210e7d7db143f83de59f 194 Pfam PF04542 Sigma-70 region 2 31 96 4.0E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_0795 91d44c94db4a210e7d7db143f83de59f 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 183 1.6E-31 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_2593 923d0e0f872777c387915b1a178466d9 171 SMART SM00506 3 137 1.2E-48 T 14-10-2018 IPR002589 Macro domain Amir_2593 923d0e0f872777c387915b1a178466d9 171 SUPERFAMILY SSF52949 3 169 9.42E-53 T 14-10-2018 Amir_2593 923d0e0f872777c387915b1a178466d9 171 Pfam PF01661 Macro domain 20 137 8.8E-40 T 14-10-2018 IPR002589 Macro domain Amir_2593 923d0e0f872777c387915b1a178466d9 171 Gene3D G3DSA:3.40.220.10 1 170 1.4E-60 T 14-10-2018 Amir_0336 add7d20d006337b38f81fe4aa0554209 214 Pfam PF01470 Pyroglutamyl peptidase 6 199 2.0E-73 T 14-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 Amir_0336 add7d20d006337b38f81fe4aa0554209 214 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 129 143 - T 14-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 Amir_0336 add7d20d006337b38f81fe4aa0554209 214 SUPERFAMILY SSF53182 4 211 4.97E-69 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 Amir_0336 add7d20d006337b38f81fe4aa0554209 214 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 4 200 37.568 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 Amir_0336 add7d20d006337b38f81fe4aa0554209 214 Gene3D G3DSA:3.40.630.20 4 214 4.5E-79 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 Amir_0336 add7d20d006337b38f81fe4aa0554209 214 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 68 84 - T 14-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 Amir_0336 add7d20d006337b38f81fe4aa0554209 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 6 29 6.3E-49 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Amir_0336 add7d20d006337b38f81fe4aa0554209 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 79 99 6.3E-49 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Amir_0336 add7d20d006337b38f81fe4aa0554209 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 161 173 6.3E-49 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Amir_0336 add7d20d006337b38f81fe4aa0554209 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 61 73 6.3E-49 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Amir_0336 add7d20d006337b38f81fe4aa0554209 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 131 147 6.3E-49 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Amir_0336 add7d20d006337b38f81fe4aa0554209 214 PIRSF PIRSF015592 3 212 1.2E-77 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Amir_0336 add7d20d006337b38f81fe4aa0554209 214 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 6 213 1.7E-78 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 Amir_0093 aef7ee5504e1633e8e5832c199ea750a 334 PIRSF PIRSF000267 1 330 5.1E-101 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Amir_0093 aef7ee5504e1633e8e5832c199ea750a 334 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 3 212 1.5E-62 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Amir_0093 aef7ee5504e1633e8e5832c199ea750a 334 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 2 318 2.6E-99 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Amir_0966 15aabfd71e886be891c2aee2d787b3b9 518 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 320 511 5.1E-28 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_0966 15aabfd71e886be891c2aee2d787b3b9 518 SMART SM00331 291 511 3.8E-9 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_0966 15aabfd71e886be891c2aee2d787b3b9 518 Gene3D G3DSA:3.60.40.10 263 511 7.8E-42 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_2757 33a2394980b18263ded9611270cb38d8 214 SMART SM00421 148 210 1.0E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2757 33a2394980b18263ded9611270cb38d8 214 SUPERFAMILY SSF52172 2 147 1.71E-20 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2757 33a2394980b18263ded9611270cb38d8 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 1.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2757 33a2394980b18263ded9611270cb38d8 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 1.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2757 33a2394980b18263ded9611270cb38d8 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 1.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2757 33a2394980b18263ded9611270cb38d8 214 SMART SM00448 1 120 4.5E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2757 33a2394980b18263ded9611270cb38d8 214 Gene3D G3DSA:3.40.50.12740 1 209 3.2E-44 T 14-10-2018 Amir_2757 33a2394980b18263ded9611270cb38d8 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 196 1.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2757 33a2394980b18263ded9611270cb38d8 214 Pfam PF00072 Response regulator receiver domain 3 107 3.5E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2757 33a2394980b18263ded9611270cb38d8 214 SUPERFAMILY SSF46894 132 196 4.76E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_1960 a2154ac64bc948385bf13cb2362b58a3 66 Pfam PF06902 Divergent 4Fe-4S mono-cluster 4 64 8.4E-15 T 14-10-2018 IPR010693 Divergent 4Fe-4S mono-cluster Amir_1960 a2154ac64bc948385bf13cb2362b58a3 66 Gene3D G3DSA:3.30.70.20 3 64 9.1E-18 T 14-10-2018 Amir_1960 a2154ac64bc948385bf13cb2362b58a3 66 PRINTS PR00352 3Fe-4S ferredoxin signature 18 28 7.7E-5 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Amir_1960 a2154ac64bc948385bf13cb2362b58a3 66 PRINTS PR00352 3Fe-4S ferredoxin signature 7 18 7.7E-5 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Amir_1960 a2154ac64bc948385bf13cb2362b58a3 66 PRINTS PR00352 3Fe-4S ferredoxin signature 49 61 7.7E-5 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Amir_1960 a2154ac64bc948385bf13cb2362b58a3 66 SUPERFAMILY SSF54862 4 63 4.98E-12 T 14-10-2018 Amir_4416 1a39911017cbaa18c43d36d5fbc57f36 363 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 43 127 9.0E-5 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Amir_4416 1a39911017cbaa18c43d36d5fbc57f36 363 SMART SM00833 215 329 1.2E-30 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Amir_4416 1a39911017cbaa18c43d36d5fbc57f36 363 Gene3D G3DSA:3.40.50.300 18 184 1.6E-7 T 14-10-2018 Amir_4416 1a39911017cbaa18c43d36d5fbc57f36 363 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 218 329 1.1E-16 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Amir_4416 1a39911017cbaa18c43d36d5fbc57f36 363 SUPERFAMILY SSF90002 218 329 5.36E-9 T 14-10-2018 Amir_4489 8a7e9509968601f7d23f71805755a62a 218 SUPERFAMILY SSF50475 11 193 1.68E-27 T 14-10-2018 Amir_4489 8a7e9509968601f7d23f71805755a62a 218 Gene3D G3DSA:2.30.110.10 1 208 7.2E-50 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_4489 8a7e9509968601f7d23f71805755a62a 218 PIRSF PIRSF010372 1 209 5.7E-40 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type Amir_4489 8a7e9509968601f7d23f71805755a62a 218 Pfam PF04299 Putative FMN-binding domain 1 167 3.3E-37 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type Amir_4500 330357b42f49e7f2f437218b452464ed 756 Gene3D G3DSA:3.40.50.1100 8 297 1.1E-78 T 14-10-2018 Amir_4500 330357b42f49e7f2f437218b452464ed 756 SUPERFAMILY SSF53686 3 306 4.71E-65 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amir_4500 330357b42f49e7f2f437218b452464ed 756 Gene3D G3DSA:3.40.50.1100 42 146 1.1E-78 T 14-10-2018 Amir_4500 330357b42f49e7f2f437218b452464ed 756 SUPERFAMILY SSF56059 444 688 3.91E-38 T 14-10-2018 Amir_4500 330357b42f49e7f2f437218b452464ed 756 Gene3D G3DSA:3.30.470.20 443 755 8.2E-82 T 14-10-2018 Amir_4500 330357b42f49e7f2f437218b452464ed 756 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 290 2.8E-44 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amir_4500 330357b42f49e7f2f437218b452464ed 756 Pfam PF13535 ATP-grasp domain 490 637 6.5E-21 T 14-10-2018 Amir_4945 d5333519f5323c9e63b9aee6162b985b 456 Pfam PF15892 BNR repeat-containing family member 59 364 1.3E-78 T 14-10-2018 IPR039469 BNR repeat-containing family member Amir_4203 1e8074b9aee2d495ffa824c6551ae125 487 Gene3D G3DSA:3.30.70.2450 175 254 2.8E-109 T 14-10-2018 Amir_4203 1e8074b9aee2d495ffa824c6551ae125 487 Gene3D G3DSA:3.50.50.60 7 331 2.8E-109 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4203 1e8074b9aee2d495ffa824c6551ae125 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 296 2.1E-41 T 14-10-2018 Amir_4203 1e8074b9aee2d495ffa824c6551ae125 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 265 280 2.1E-41 T 14-10-2018 Amir_4203 1e8074b9aee2d495ffa824c6551ae125 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 316 2.1E-41 T 14-10-2018 Amir_4203 1e8074b9aee2d495ffa824c6551ae125 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 2.1E-41 T 14-10-2018 Amir_4203 1e8074b9aee2d495ffa824c6551ae125 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 2.1E-41 T 14-10-2018 Amir_4203 1e8074b9aee2d495ffa824c6551ae125 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 316 332 2.1E-41 T 14-10-2018 Amir_4203 1e8074b9aee2d495ffa824c6551ae125 487 Pfam PF01494 FAD binding domain 7 329 3.9E-77 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_4203 1e8074b9aee2d495ffa824c6551ae125 487 Gene3D G3DSA:3.40.30.120 372 479 4.0E-8 T 14-10-2018 Amir_4203 1e8074b9aee2d495ffa824c6551ae125 487 SUPERFAMILY SSF51905 6 356 1.2E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4466 214028c33c5029d7eb82a05a725f32c0 204 SUPERFAMILY SSF46689 11 79 2.94E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4466 214028c33c5029d7eb82a05a725f32c0 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 1.8E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4466 214028c33c5029d7eb82a05a725f32c0 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 1.8E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4466 214028c33c5029d7eb82a05a725f32c0 204 SUPERFAMILY SSF48498 93 171 8.15E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4466 214028c33c5029d7eb82a05a725f32c0 204 Gene3D G3DSA:1.10.357.10 22 204 2.6E-40 T 14-10-2018 Amir_4466 214028c33c5029d7eb82a05a725f32c0 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 2.3E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4466 214028c33c5029d7eb82a05a725f32c0 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 69 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_3931 1bb7b3b073c6af928b059ff79c154771 330 Pfam PF00248 Aldo/keto reductase family 17 309 5.3E-73 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_3931 1bb7b3b073c6af928b059ff79c154771 330 SUPERFAMILY SSF51430 10 310 4.85E-99 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3931 1bb7b3b073c6af928b059ff79c154771 330 Gene3D G3DSA:3.20.20.100 8 326 2.9E-113 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3931 1bb7b3b073c6af928b059ff79c154771 330 PRINTS PR00069 Aldo-keto reductase signature 43 67 2.5E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_3931 1bb7b3b073c6af928b059ff79c154771 330 PRINTS PR00069 Aldo-keto reductase signature 109 127 2.5E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_3931 1bb7b3b073c6af928b059ff79c154771 330 PRINTS PR00069 Aldo-keto reductase signature 140 157 2.5E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_3125 4b7e8a290cb3fd3139c42ca85699afe2 93 SUPERFAMILY SSF55103 6 87 1.83E-6 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Amir_3125 4b7e8a290cb3fd3139c42ca85699afe2 93 Gene3D G3DSA:3.40.462.10 2 59 3.5E-8 T 14-10-2018 IPR016170 Cytokinin dehydrogenase, C-terminal domain superfamily KEGG: 00908+1.5.99.12 Amir_4386 f16f5024f085f81f371b85b2688ccb66 333 Gene3D G3DSA:3.40.640.10 17 241 5.7E-95 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_4386 f16f5024f085f81f371b85b2688ccb66 333 Pfam PF00155 Aminotransferase class I and II 16 321 5.2E-43 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_4386 f16f5024f085f81f371b85b2688ccb66 333 Gene3D G3DSA:3.90.1150.10 6 323 5.7E-95 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_4386 f16f5024f085f81f371b85b2688ccb66 333 SUPERFAMILY SSF53383 6 325 4.49E-70 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_7003 b4712b78ccc20c851b0e4caff66515ae 84 Pfam PF04149 Domain of unknown function (DUF397) 6 28 1.1E-6 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_7003 b4712b78ccc20c851b0e4caff66515ae 84 Pfam PF04149 Domain of unknown function (DUF397) 29 81 1.2E-19 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_6066 45a20a290699c2ccc741fdeaa70554e4 273 SUPERFAMILY SSF52540 5 240 8.68E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6066 45a20a290699c2ccc741fdeaa70554e4 273 SMART SM00382 32 232 2.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6066 45a20a290699c2ccc741fdeaa70554e4 273 Pfam PF00005 ABC transporter 25 174 1.2E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6066 45a20a290699c2ccc741fdeaa70554e4 273 Gene3D G3DSA:3.40.50.300 1 263 6.4E-54 T 14-10-2018 Amir_6755 c62b59a0c097dff521956146fa485806 335 Pfam PF14257 Domain of unknown function (DUF4349) 17 280 2.9E-67 T 14-10-2018 IPR025645 Domain of unknown function DUF4349 Amir_6097 5c1fed10464e6920cbd5db5b8cbdb365 559 Pfam PF08386 TAP-like protein 433 533 4.7E-23 T 14-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal Amir_6097 5c1fed10464e6920cbd5db5b8cbdb365 559 Gene3D G3DSA:3.40.50.1820 387 524 2.8E-7 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6097 5c1fed10464e6920cbd5db5b8cbdb365 559 SUPERFAMILY SSF53474 101 521 3.69E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3971 790e49133e3501dc916fd526c6987f62 495 Gene3D G3DSA:2.40.10.480 254 328 4.1E-6 T 14-10-2018 Amir_3971 790e49133e3501dc916fd526c6987f62 495 SUPERFAMILY SSF50998 148 374 7.32E-13 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Amir_3971 790e49133e3501dc916fd526c6987f62 495 SMART SM00564 162 194 1.1 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Amir_3971 790e49133e3501dc916fd526c6987f62 495 SMART SM00564 252 283 41.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Amir_3971 790e49133e3501dc916fd526c6987f62 495 Pfam PF13360 PQQ-like domain 215 387 3.7E-8 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Amir_3971 790e49133e3501dc916fd526c6987f62 495 Pfam PF13360 PQQ-like domain 132 201 1.2E-5 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Amir_3971 790e49133e3501dc916fd526c6987f62 495 Gene3D G3DSA:2.130.10.10 100 251 2.1E-7 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_1462 5b1a2d9ec2abe4057e45f7ed566511c9 680 Gene3D G3DSA:3.40.50.1820 417 671 1.0E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1462 5b1a2d9ec2abe4057e45f7ed566511c9 680 Pfam PF07676 WD40-like Beta Propeller Repeat 64 94 0.089 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_1462 5b1a2d9ec2abe4057e45f7ed566511c9 680 Gene3D G3DSA:2.120.10.30 2 144 1.3E-10 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_1462 5b1a2d9ec2abe4057e45f7ed566511c9 680 Gene3D G3DSA:2.120.10.30 209 416 3.7E-18 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_1462 5b1a2d9ec2abe4057e45f7ed566511c9 680 SUPERFAMILY SSF82171 21 399 6.54E-30 T 14-10-2018 Amir_1462 5b1a2d9ec2abe4057e45f7ed566511c9 680 Pfam PF00326 Prolyl oligopeptidase family 464 669 2.9E-47 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Amir_1462 5b1a2d9ec2abe4057e45f7ed566511c9 680 SUPERFAMILY SSF53474 420 669 1.1E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6110 e07f225e6bc769a5fec07fb0cffd4794 69 Pfam PF09723 Zinc ribbon domain 2 40 2.6E-12 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Amir_6110 e07f225e6bc769a5fec07fb0cffd4794 69 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 2 46 7.1E-15 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Amir_6110 e07f225e6bc769a5fec07fb0cffd4794 69 SMART SM00834 2 42 4.6E-12 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Amir_0147 c2adc6500338bc0f281e2c767d78ae65 227 Gene3D G3DSA:3.40.50.1820 6 224 6.4E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0147 c2adc6500338bc0f281e2c767d78ae65 227 SUPERFAMILY SSF53474 5 226 1.3E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0147 c2adc6500338bc0f281e2c767d78ae65 227 Pfam PF01738 Dienelactone hydrolase family 20 225 3.9E-28 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Amir_4731 24139e93841a78792ef911d9b4f02ba0 490 Pfam PF01979 Amidohydrolase family 72 450 1.4E-25 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_4731 24139e93841a78792ef911d9b4f02ba0 490 SUPERFAMILY SSF51556 75 403 1.33E-45 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_4731 24139e93841a78792ef911d9b4f02ba0 490 Gene3D G3DSA:3.20.20.140 77 462 1.5E-89 T 14-10-2018 Amir_4731 24139e93841a78792ef911d9b4f02ba0 490 Gene3D G3DSA:2.30.40.10 29 457 1.5E-89 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_4731 24139e93841a78792ef911d9b4f02ba0 490 SUPERFAMILY SSF51338 22 476 3.71E-24 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_6647 baad9b9c57a65b5d215c9b549da0fe1a 148 SUPERFAMILY SSF54637 7 147 1.36E-37 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_6647 baad9b9c57a65b5d215c9b549da0fe1a 148 PIRSF PIRSF018072 2 148 5.3E-56 T 14-10-2018 IPR016709 Uncharacterised protein family UPF0336 Amir_6647 baad9b9c57a65b5d215c9b549da0fe1a 148 Pfam PF13452 N-terminal half of MaoC dehydratase 7 137 9.7E-32 T 14-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 Amir_6647 baad9b9c57a65b5d215c9b549da0fe1a 148 Gene3D G3DSA:3.10.129.10 2 148 3.8E-47 T 14-10-2018 Amir_6647 baad9b9c57a65b5d215c9b549da0fe1a 148 Hamap MF_00799 UPF0336 protein . 1 148 32.347 T 14-10-2018 IPR016709 Uncharacterised protein family UPF0336 Amir_3819 29708d621eb7068ea494337494d74a70 326 PRINTS PR00069 Aldo-keto reductase signature 113 131 2.2E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_3819 29708d621eb7068ea494337494d74a70 326 PRINTS PR00069 Aldo-keto reductase signature 47 71 2.2E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_3819 29708d621eb7068ea494337494d74a70 326 PRINTS PR00069 Aldo-keto reductase signature 144 161 2.2E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_3819 29708d621eb7068ea494337494d74a70 326 Gene3D G3DSA:3.20.20.100 1 324 1.1E-120 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3819 29708d621eb7068ea494337494d74a70 326 SUPERFAMILY SSF51430 3 318 2.49E-100 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3819 29708d621eb7068ea494337494d74a70 326 Pfam PF00248 Aldo/keto reductase family 15 315 2.4E-76 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_0967 2433911b8b92407854332d9271c18539 325 Gene3D G3DSA:1.10.1240.10 4 78 3.4E-12 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_0967 2433911b8b92407854332d9271c18539 325 Pfam PF02310 B12 binding domain 88 198 1.4E-17 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amir_0967 2433911b8b92407854332d9271c18539 325 SUPERFAMILY SSF52242 83 205 4.84E-20 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amir_0967 2433911b8b92407854332d9271c18539 325 Pfam PF02607 B12 binding domain 7 75 2.8E-7 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_0967 2433911b8b92407854332d9271c18539 325 Gene3D G3DSA:3.40.50.280 81 205 1.2E-25 T 14-10-2018 Amir_5378 5e8c56a43d05b813ad7b1e6786bedf84 1066 SUPERFAMILY SSF82171 76 708 3.41E-18 T 14-10-2018 Amir_5378 5e8c56a43d05b813ad7b1e6786bedf84 1066 Pfam PF13519 von Willebrand factor type A domain 242 353 8.5E-8 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_5378 5e8c56a43d05b813ad7b1e6786bedf84 1066 Gene3D G3DSA:2.120.10.30 587 736 2.4E-17 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_5378 5e8c56a43d05b813ad7b1e6786bedf84 1066 Gene3D G3DSA:3.40.50.410 238 434 9.3E-12 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_5378 5e8c56a43d05b813ad7b1e6786bedf84 1066 Pfam PF07676 WD40-like Beta Propeller Repeat 182 204 4.9E-6 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_5378 5e8c56a43d05b813ad7b1e6786bedf84 1066 Pfam PF07676 WD40-like Beta Propeller Repeat 74 89 0.049 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_5378 5e8c56a43d05b813ad7b1e6786bedf84 1066 Pfam PF07676 WD40-like Beta Propeller Repeat 630 644 7.8E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_5378 5e8c56a43d05b813ad7b1e6786bedf84 1066 Pfam PF07676 WD40-like Beta Propeller Repeat 139 156 0.013 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_5378 5e8c56a43d05b813ad7b1e6786bedf84 1066 SUPERFAMILY SSF53300 241 383 6.52E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_5378 5e8c56a43d05b813ad7b1e6786bedf84 1066 Gene3D G3DSA:2.120.10.30 111 215 2.4E-13 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_1156 67c99132b2deac87223a3636145fd669 302 SUPERFAMILY SSF53474 62 299 1.39E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1156 67c99132b2deac87223a3636145fd669 302 Pfam PF00756 Putative esterase 74 258 7.2E-10 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Amir_1156 67c99132b2deac87223a3636145fd669 302 Gene3D G3DSA:3.40.50.1820 65 300 1.5E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6441 19b2065fcc25bed4d93b50b39218c96e 107 SUPERFAMILY SSF140453 55 103 6.54E-5 T 14-10-2018 IPR036689 ESAT-6-like superfamily Amir_5089 f1a01e14b82ba6cc88135cb05ff43232 1100 SUPERFAMILY SSF52540 62 335 4.34E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5089 f1a01e14b82ba6cc88135cb05ff43232 1100 Gene3D G3DSA:3.40.50.300 675 831 9.0E-9 T 14-10-2018 Amir_5089 f1a01e14b82ba6cc88135cb05ff43232 1100 SMART SM00382 63 317 7.6 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5089 f1a01e14b82ba6cc88135cb05ff43232 1100 SMART SM00382 717 1062 1.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5089 f1a01e14b82ba6cc88135cb05ff43232 1100 SUPERFAMILY SSF52540 674 1035 9.5E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5089 f1a01e14b82ba6cc88135cb05ff43232 1100 Pfam PF01935 Domain of unknown function DUF87 714 762 1.0E-7 T 14-10-2018 IPR002789 Helicase HerA, central domain Amir_5089 f1a01e14b82ba6cc88135cb05ff43232 1100 Gene3D G3DSA:3.40.50.300 915 1073 5.9E-16 T 14-10-2018 Amir_4711 6b4b47c01ca95e54482cecc41a0444e6 648 Gene3D G3DSA:3.40.50.300 168 404 9.8E-8 T 14-10-2018 Amir_4711 6b4b47c01ca95e54482cecc41a0444e6 648 Pfam PF13175 AAA ATPase domain 195 384 1.3E-19 T 14-10-2018 Amir_4711 6b4b47c01ca95e54482cecc41a0444e6 648 Pfam PF13175 AAA ATPase domain 1 64 5.1E-19 T 14-10-2018 Amir_4711 6b4b47c01ca95e54482cecc41a0444e6 648 SUPERFAMILY SSF52540 1 385 4.12E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4711 6b4b47c01ca95e54482cecc41a0444e6 648 Gene3D G3DSA:3.40.50.300 1 140 1.1E-15 T 14-10-2018 Amir_3839 d34007c4f7fadab3bd28308a4b920f70 362 SUPERFAMILY SSF89733 5 357 2.75E-81 T 14-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 Amir_3839 d34007c4f7fadab3bd28308a4b920f70 362 Gene3D G3DSA:1.10.1530.10 17 354 1.8E-90 T 14-10-2018 Amir_3839 d34007c4f7fadab3bd28308a4b920f70 362 Pfam PF02615 Malate/L-lactate dehydrogenase 8 351 2.0E-96 T 14-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 Amir_3839 d34007c4f7fadab3bd28308a4b920f70 362 Gene3D G3DSA:3.30.1370.60 72 325 1.8E-90 T 14-10-2018 Amir_5890 7cee3b25bf032d1500da40d1269fd178 406 PIRSF PIRSF006205 4 403 6.0E-135 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Amir_5890 7cee3b25bf032d1500da40d1269fd178 406 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 158 241 3.9E-37 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Amir_5890 7cee3b25bf032d1500da40d1269fd178 406 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 7 396 43.127 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Amir_5890 7cee3b25bf032d1500da40d1269fd178 406 SUPERFAMILY SSF69055 305 397 3.53E-24 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Amir_5890 7cee3b25bf032d1500da40d1269fd178 406 Gene3D G3DSA:1.10.1740.10 314 400 1.3E-27 T 14-10-2018 Amir_5890 7cee3b25bf032d1500da40d1269fd178 406 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 399 3.4E-112 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Amir_5890 7cee3b25bf032d1500da40d1269fd178 406 Gene3D G3DSA:3.40.50.720 2 162 8.1E-43 T 14-10-2018 Amir_5890 7cee3b25bf032d1500da40d1269fd178 406 Pfam PF13288 DXP reductoisomerase C-terminal domain 274 391 1.4E-31 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Amir_5890 7cee3b25bf032d1500da40d1269fd178 406 SUPERFAMILY SSF55347 140 276 4.58E-55 T 14-10-2018 Amir_5890 7cee3b25bf032d1500da40d1269fd178 406 SUPERFAMILY SSF51735 4 162 2.23E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5890 7cee3b25bf032d1500da40d1269fd178 406 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 146 3.1E-35 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Amir_6945 9192c54f6784d810647103cd48a08553 367 SUPERFAMILY SSF52343 237 365 1.44E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amir_6945 9192c54f6784d810647103cd48a08553 367 PRINTS PR00410 Phenol hydroxylase reductase family signature 243 262 7.7E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Amir_6945 9192c54f6784d810647103cd48a08553 367 PRINTS PR00410 Phenol hydroxylase reductase family signature 332 340 7.7E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Amir_6945 9192c54f6784d810647103cd48a08553 367 PRINTS PR00410 Phenol hydroxylase reductase family signature 165 177 7.7E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Amir_6945 9192c54f6784d810647103cd48a08553 367 PRINTS PR00410 Phenol hydroxylase reductase family signature 268 277 7.7E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Amir_6945 9192c54f6784d810647103cd48a08553 367 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 190 2.2E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Amir_6945 9192c54f6784d810647103cd48a08553 367 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 165 175 2.2E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Amir_6945 9192c54f6784d810647103cd48a08553 367 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 243 262 2.2E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Amir_6945 9192c54f6784d810647103cd48a08553 367 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 332 340 2.2E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Amir_6945 9192c54f6784d810647103cd48a08553 367 SUPERFAMILY SSF63380 138 232 5.38E-24 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amir_6945 9192c54f6784d810647103cd48a08553 367 SUPERFAMILY SSF46458 3 128 5.17E-33 T 14-10-2018 IPR009050 Globin-like superfamily Amir_6945 9192c54f6784d810647103cd48a08553 367 Gene3D G3DSA:3.40.50.80 233 366 6.8E-29 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amir_6945 9192c54f6784d810647103cd48a08553 367 Pfam PF00175 Oxidoreductase NAD-binding domain 244 345 2.8E-18 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Amir_6945 9192c54f6784d810647103cd48a08553 367 Pfam PF00970 Oxidoreductase FAD-binding domain 140 232 4.9E-16 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Amir_6945 9192c54f6784d810647103cd48a08553 367 Pfam PF00042 Globin 3 95 8.3E-9 T 14-10-2018 IPR000971 Globin GO:0020037 Amir_6945 9192c54f6784d810647103cd48a08553 367 Gene3D G3DSA:1.10.490.10 1 132 9.2E-37 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Amir_6945 9192c54f6784d810647103cd48a08553 367 Gene3D G3DSA:2.40.30.10 133 230 2.2E-22 T 14-10-2018 Amir_6187 b3bf93e473b64cd7d73d9a006ac88d0a 329 Gene3D G3DSA:1.10.3720.10 94 322 4.2E-15 T 14-10-2018 IPR035906 MetI-like superfamily Amir_6187 b3bf93e473b64cd7d73d9a006ac88d0a 329 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 326 1.7E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_6187 b3bf93e473b64cd7d73d9a006ac88d0a 329 SUPERFAMILY SSF161098 99 309 5.67E-11 T 14-10-2018 IPR035906 MetI-like superfamily Amir_6349 3e928e0ee7834ef3f2fec30911604512 410 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 95 263 2.4E-41 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amir_6349 3e928e0ee7834ef3f2fec30911604512 410 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 95 263 1.7E-35 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amir_6349 3e928e0ee7834ef3f2fec30911604512 410 Gene3D G3DSA:1.10.260.150 50 367 5.9E-69 T 14-10-2018 Amir_2586 3b9a88ea29e71118caeba1d9c83b19eb 454 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 264 274 - T 14-10-2018 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_2586 3b9a88ea29e71118caeba1d9c83b19eb 454 SMART SM00633 82 338 3.8E-129 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_2586 3b9a88ea29e71118caeba1d9c83b19eb 454 Gene3D G3DSA:2.60.40.290 354 453 1.6E-22 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_2586 3b9a88ea29e71118caeba1d9c83b19eb 454 SUPERFAMILY SSF49384 357 451 6.14E-22 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_2586 3b9a88ea29e71118caeba1d9c83b19eb 454 SMART SM00637 361 449 4.5E-25 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_2586 3b9a88ea29e71118caeba1d9c83b19eb 454 PRINTS PR00134 Glycosyl hydrolase family 10 signature 200 211 1.4E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_2586 3b9a88ea29e71118caeba1d9c83b19eb 454 PRINTS PR00134 Glycosyl hydrolase family 10 signature 113 125 1.4E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_2586 3b9a88ea29e71118caeba1d9c83b19eb 454 PRINTS PR00134 Glycosyl hydrolase family 10 signature 155 166 1.4E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_2586 3b9a88ea29e71118caeba1d9c83b19eb 454 PRINTS PR00134 Glycosyl hydrolase family 10 signature 230 242 1.4E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_2586 3b9a88ea29e71118caeba1d9c83b19eb 454 Pfam PF00331 Glycosyl hydrolase family 10 43 336 3.9E-105 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_2586 3b9a88ea29e71118caeba1d9c83b19eb 454 SUPERFAMILY SSF51445 39 343 2.25E-106 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_2586 3b9a88ea29e71118caeba1d9c83b19eb 454 Pfam PF00553 Cellulose binding domain 361 447 1.6E-17 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_2586 3b9a88ea29e71118caeba1d9c83b19eb 454 Gene3D G3DSA:3.20.20.80 36 348 9.5E-118 T 14-10-2018 Amir_5658 7faa1030c268b9e0299b7ef5dfb637a6 201 Pfam PF00881 Nitroreductase family 21 179 4.2E-16 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amir_5658 7faa1030c268b9e0299b7ef5dfb637a6 201 SUPERFAMILY SSF55469 18 200 6.81E-42 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_5658 7faa1030c268b9e0299b7ef5dfb637a6 201 Gene3D G3DSA:3.40.109.10 18 200 5.8E-32 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_1717 7657a543ad24e9ec99e6998514361f5f 381 Gene3D G3DSA:3.40.50.200 109 372 8.9E-74 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_1717 7657a543ad24e9ec99e6998514361f5f 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 138 157 6.9E-13 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1717 7657a543ad24e9ec99e6998514361f5f 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 176 189 6.9E-13 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1717 7657a543ad24e9ec99e6998514361f5f 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 329 345 6.9E-13 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1717 7657a543ad24e9ec99e6998514361f5f 381 SUPERFAMILY SSF54897 38 106 5.04E-9 T 14-10-2018 Amir_1717 7657a543ad24e9ec99e6998514361f5f 381 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 143 154 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_1717 7657a543ad24e9ec99e6998514361f5f 381 Pfam PF00082 Subtilase family 146 366 1.5E-22 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_1717 7657a543ad24e9ec99e6998514361f5f 381 SUPERFAMILY SSF52743 110 367 1.83E-61 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_1717 7657a543ad24e9ec99e6998514361f5f 381 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 180 190 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Amir_1717 7657a543ad24e9ec99e6998514361f5f 381 Gene3D G3DSA:3.30.70.80 33 108 1.8E-11 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Amir_1717 7657a543ad24e9ec99e6998514361f5f 381 Pfam PF05922 Peptidase inhibitor I9 74 106 3.8E-7 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Amir_0382 d09157b8be304922e5ed948a08eae8ba 237 SUPERFAMILY SSF143631 3 233 5.23E-56 T 14-10-2018 IPR003374 ApbE-like superfamily Amir_0382 d09157b8be304922e5ed948a08eae8ba 237 Gene3D G3DSA:3.10.520.20 88 235 7.4E-42 T 14-10-2018 Amir_0382 d09157b8be304922e5ed948a08eae8ba 237 Gene3D G3DSA:3.10.520.20 1 87 7.3E-12 T 14-10-2018 Amir_0382 d09157b8be304922e5ed948a08eae8ba 237 Pfam PF02424 ApbE family 89 217 1.6E-33 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Amir_0382 d09157b8be304922e5ed948a08eae8ba 237 Pfam PF02424 ApbE family 8 88 3.1E-9 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Amir_3316 6238d1d82633072898adde7f038d82c2 484 SUPERFAMILY SSF53474 78 466 4.01E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3316 6238d1d82633072898adde7f038d82c2 484 Pfam PF00561 alpha/beta hydrolase fold 82 453 3.9E-25 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_3296 def6b72d413d9b890b5636bd82bcd7a8 349 SUPERFAMILY SSF56796 18 343 1.96E-88 T 14-10-2018 Amir_3296 def6b72d413d9b890b5636bd82bcd7a8 349 Pfam PF01761 3-dehydroquinate synthase 73 314 3.3E-78 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Amir_3296 def6b72d413d9b890b5636bd82bcd7a8 349 PIRSF PIRSF001455 41 347 1.9E-76 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Amir_3296 def6b72d413d9b890b5636bd82bcd7a8 349 Gene3D G3DSA:3.40.50.1970 4 176 2.5E-48 T 14-10-2018 Amir_3296 def6b72d413d9b890b5636bd82bcd7a8 349 Gene3D G3DSA:1.20.1090.10 177 347 4.9E-40 T 14-10-2018 Amir_2337 29a2c0a23fde87817604e3a45889c34e 257 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 185 202 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site Amir_2337 29a2c0a23fde87817604e3a45889c34e 257 Pfam PF01618 MotA/TolQ/ExbB proton channel family 100 219 9.8E-25 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Amir_4537 8b25083af3dd240c383ed6b1712b2805 391 Pfam PF04055 Radical SAM superfamily 50 215 5.5E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_4537 8b25083af3dd240c383ed6b1712b2805 391 SUPERFAMILY SSF102114 44 387 2.22E-45 T 14-10-2018 Amir_4537 8b25083af3dd240c383ed6b1712b2805 391 Pfam PF13394 4Fe-4S single cluster domain 52 123 5.6E-7 T 14-10-2018 Amir_4537 8b25083af3dd240c383ed6b1712b2805 391 Pfam PF13186 Iron-sulfur cluster-binding domain 321 383 1.3E-9 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Amir_2655 c9ce05897fb1a0ae0b71e69deb8d5acc 181 Pfam PF00005 ABC transporter 27 151 6.4E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2655 c9ce05897fb1a0ae0b71e69deb8d5acc 181 SUPERFAMILY SSF52540 12 150 2.23E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2655 c9ce05897fb1a0ae0b71e69deb8d5acc 181 Gene3D G3DSA:3.40.50.300 5 175 1.1E-29 T 14-10-2018 Amir_4654 fd0505ac4fbd6c1cd67d420f4a33fed5 464 Gene3D G3DSA:1.10.40.30 375 461 3.1E-10 T 14-10-2018 Amir_4654 fd0505ac4fbd6c1cd67d420f4a33fed5 464 Gene3D G3DSA:1.20.200.10 114 373 7.1E-92 T 14-10-2018 Amir_4654 fd0505ac4fbd6c1cd67d420f4a33fed5 464 SMART SM00998 376 454 0.0072 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amir_4654 fd0505ac4fbd6c1cd67d420f4a33fed5 464 Gene3D G3DSA:1.10.275.10 4 113 4.2E-24 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Amir_4654 fd0505ac4fbd6c1cd67d420f4a33fed5 464 PRINTS PR00145 Argininosuccinate lyase family signature 243 267 1.5E-8 T 14-10-2018 Amir_4654 fd0505ac4fbd6c1cd67d420f4a33fed5 464 PRINTS PR00145 Argininosuccinate lyase family signature 149 169 1.5E-8 T 14-10-2018 Amir_4654 fd0505ac4fbd6c1cd67d420f4a33fed5 464 PRINTS PR00145 Argininosuccinate lyase family signature 288 304 1.5E-8 T 14-10-2018 Amir_4654 fd0505ac4fbd6c1cd67d420f4a33fed5 464 PRINTS PR00145 Argininosuccinate lyase family signature 108 130 1.5E-8 T 14-10-2018 Amir_4654 fd0505ac4fbd6c1cd67d420f4a33fed5 464 PRINTS PR00145 Argininosuccinate lyase family signature 198 214 1.5E-8 T 14-10-2018 Amir_4654 fd0505ac4fbd6c1cd67d420f4a33fed5 464 SUPERFAMILY SSF48557 12 459 6.6E-92 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Amir_4654 fd0505ac4fbd6c1cd67d420f4a33fed5 464 Pfam PF00206 Lyase 29 311 2.5E-38 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Amir_4654 fd0505ac4fbd6c1cd67d420f4a33fed5 464 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 17 361 4.5E-108 T 14-10-2018 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 Amir_4654 fd0505ac4fbd6c1cd67d420f4a33fed5 464 PRINTS PR00149 Fumarate lyase superfamily signature 154 172 4.2E-18 T 14-10-2018 IPR000362 Fumarate lyase family Amir_4654 fd0505ac4fbd6c1cd67d420f4a33fed5 464 PRINTS PR00149 Fumarate lyase superfamily signature 243 270 4.2E-18 T 14-10-2018 IPR000362 Fumarate lyase family Amir_4654 fd0505ac4fbd6c1cd67d420f4a33fed5 464 PRINTS PR00149 Fumarate lyase superfamily signature 109 127 4.2E-18 T 14-10-2018 IPR000362 Fumarate lyase family Amir_4654 fd0505ac4fbd6c1cd67d420f4a33fed5 464 PRINTS PR00149 Fumarate lyase superfamily signature 288 304 4.2E-18 T 14-10-2018 IPR000362 Fumarate lyase family Amir_3030 7209039a48244ed08ea6b7243ddc9b3a 135 Pfam PF00720 Subtilisin inhibitor-like 45 115 4.7E-19 T 14-10-2018 IPR023549 Subtilisin inhibitor GO:0004867 Amir_3030 7209039a48244ed08ea6b7243ddc9b3a 135 PRINTS PR00294 Streptomyces subtilisin inhibitor signature 87 103 1.0E-13 T 14-10-2018 IPR000691 Proteinase inhibitor I16, Streptomyces subtilisin-type inhibitor GO:0004867 Amir_3030 7209039a48244ed08ea6b7243ddc9b3a 135 PRINTS PR00294 Streptomyces subtilisin inhibitor signature 52 79 1.0E-13 T 14-10-2018 IPR000691 Proteinase inhibitor I16, Streptomyces subtilisin-type inhibitor GO:0004867 Amir_3030 7209039a48244ed08ea6b7243ddc9b3a 135 PRINTS PR00294 Streptomyces subtilisin inhibitor signature 104 120 1.0E-13 T 14-10-2018 IPR000691 Proteinase inhibitor I16, Streptomyces subtilisin-type inhibitor GO:0004867 Amir_3030 7209039a48244ed08ea6b7243ddc9b3a 135 ProDom PD004028 INHIBITOR PROTEASE SERINE DIRECT SEQUENCING SUBTILISIN PRECURSOR SIGNAL INHIBITOR-LIKE INHIBITOR 49 119 0.001 T 14-10-2018 IPR023549 Subtilisin inhibitor GO:0004867 Amir_3030 7209039a48244ed08ea6b7243ddc9b3a 135 Gene3D G3DSA:3.30.350.10 21 129 7.1E-27 T 14-10-2018 IPR036819 Subtilisin inhibitor-like superfamily GO:0004867 Amir_3030 7209039a48244ed08ea6b7243ddc9b3a 135 SUPERFAMILY SSF55399 41 128 1.31E-25 T 14-10-2018 IPR036819 Subtilisin inhibitor-like superfamily GO:0004867 Amir_0680 82c97bfbc7566b77285d240a0671b338 332 Gene3D G3DSA:3.40.50.300 4 330 1.1E-101 T 14-10-2018 Amir_0680 82c97bfbc7566b77285d240a0671b338 332 Pfam PF00005 ABC transporter 34 185 2.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0680 82c97bfbc7566b77285d240a0671b338 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 323 2.3E-25 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_0680 82c97bfbc7566b77285d240a0671b338 332 SUPERFAMILY SSF52540 6 257 3.2E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0680 82c97bfbc7566b77285d240a0671b338 332 SMART SM00382 42 235 8.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0680 82c97bfbc7566b77285d240a0671b338 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 304 4.0E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_0680 82c97bfbc7566b77285d240a0671b338 332 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_7093 a6dce6b2f4a19508644728b89bae1201 339 SUPERFAMILY SSF52540 79 330 1.3E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_7093 a6dce6b2f4a19508644728b89bae1201 339 Pfam PF13614 AAA domain 79 258 4.1E-59 T 14-10-2018 IPR025669 AAA domain Amir_7093 a6dce6b2f4a19508644728b89bae1201 339 Gene3D G3DSA:3.40.50.300 74 332 3.9E-78 T 14-10-2018 Amir_6487 06ac83274c9c933719d3c38aeeaebadf 317 SMART SM00382 39 224 3.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6487 06ac83274c9c933719d3c38aeeaebadf 317 Pfam PF00005 ABC transporter 32 174 1.7E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6487 06ac83274c9c933719d3c38aeeaebadf 317 Gene3D G3DSA:3.40.50.300 16 251 2.9E-56 T 14-10-2018 Amir_6487 06ac83274c9c933719d3c38aeeaebadf 317 SUPERFAMILY SSF52540 27 239 3.31E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2108 ca338366829b4aa362bb0573ab93ee53 322 SUPERFAMILY SSF51366 46 295 9.42E-63 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Amir_2108 ca338366829b4aa362bb0573ab93ee53 322 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 37 322 7.6E-145 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Amir_2108 ca338366829b4aa362bb0573ab93ee53 322 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 32 322 52.846 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Amir_2108 ca338366829b4aa362bb0573ab93ee53 322 Pfam PF01680 SOR/SNZ family 35 240 2.5E-106 T 14-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Amir_2108 ca338366829b4aa362bb0573ab93ee53 322 Gene3D G3DSA:3.20.20.70 29 322 5.9E-151 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_2108 ca338366829b4aa362bb0573ab93ee53 322 PIRSF PIRSF029271 24 322 5.1E-150 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Amir_2108 ca338366829b4aa362bb0573ab93ee53 322 ProSitePatterns PS01235 PdxS/SNZ family signature. 233 251 - T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Amir_0529 adda14ccc23f8566293c6a6d985eeb10 421 Pfam PF00875 DNA photolyase 5 151 1.6E-42 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 Amir_0529 adda14ccc23f8566293c6a6d985eeb10 421 Gene3D G3DSA:1.25.40.80 123 255 1.2E-27 T 14-10-2018 Amir_0529 adda14ccc23f8566293c6a6d985eeb10 421 Gene3D G3DSA:3.40.50.620 3 117 5.2E-33 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_0529 adda14ccc23f8566293c6a6d985eeb10 421 Pfam PF03441 FAD binding domain of DNA photolyase 238 416 6.4E-75 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 Amir_0529 adda14ccc23f8566293c6a6d985eeb10 421 SUPERFAMILY SSF52425 5 165 1.31E-44 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 Amir_0529 adda14ccc23f8566293c6a6d985eeb10 421 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 287 299 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal Amir_0529 adda14ccc23f8566293c6a6d985eeb10 421 PRINTS PR00147 DNA photolyase signature 131 147 2.1E-26 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Amir_0529 adda14ccc23f8566293c6a6d985eeb10 421 PRINTS PR00147 DNA photolyase signature 346 360 2.1E-26 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Amir_0529 adda14ccc23f8566293c6a6d985eeb10 421 PRINTS PR00147 DNA photolyase signature 307 325 2.1E-26 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Amir_0529 adda14ccc23f8566293c6a6d985eeb10 421 PRINTS PR00147 DNA photolyase signature 287 303 2.1E-26 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Amir_0529 adda14ccc23f8566293c6a6d985eeb10 421 SUPERFAMILY SSF48173 182 420 3.4E-93 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Amir_0529 adda14ccc23f8566293c6a6d985eeb10 421 Gene3D G3DSA:1.10.579.10 256 421 6.5E-72 T 14-10-2018 Amir_3585 120aa68694c28a32c4869673598334c5 315 PIRSF PIRSF001439 2 314 1.3E-48 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Amir_3585 120aa68694c28a32c4869673598334c5 315 Gene3D G3DSA:3.40.50.720 125 297 2.0E-70 T 14-10-2018 Amir_3585 120aa68694c28a32c4869673598334c5 315 Gene3D G3DSA:3.30.1780.10 9 312 2.0E-70 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 Amir_3585 120aa68694c28a32c4869673598334c5 315 SUPERFAMILY SSF51735 6 313 1.09E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3585 120aa68694c28a32c4869673598334c5 315 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 9 313 5.4E-38 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Amir_4775 ff96dc4d06f77f208b1bf0fc1cd8ab78 492 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 176 216 1.8E-9 T 14-10-2018 IPR022435 Surface-anchored repeat, actinobacteria Amir_2131 93ceed9baf00ae0175b8de4fbcc82bd4 124 Pfam PF01471 Putative peptidoglycan binding domain 52 109 1.2E-6 T 14-10-2018 IPR002477 Peptidoglycan binding-like Amir_2131 93ceed9baf00ae0175b8de4fbcc82bd4 124 Gene3D G3DSA:1.10.101.10 35 122 8.1E-17 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Amir_2131 93ceed9baf00ae0175b8de4fbcc82bd4 124 SUPERFAMILY SSF47090 41 118 2.01E-10 T 14-10-2018 IPR036365 PGBD-like superfamily Amir_1871 c959840e82d0fb123265b1038a045f73 333 Pfam PF13377 Periplasmic binding protein-like domain 166 328 8.3E-39 T 14-10-2018 Amir_1871 c959840e82d0fb123265b1038a045f73 333 Gene3D G3DSA:1.10.260.40 1 60 4.6E-21 T 14-10-2018 Amir_1871 c959840e82d0fb123265b1038a045f73 333 SUPERFAMILY SSF53822 63 329 5.39E-66 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_1871 c959840e82d0fb123265b1038a045f73 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.7E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1871 c959840e82d0fb123265b1038a045f73 333 SUPERFAMILY SSF47413 3 60 8.16E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1871 c959840e82d0fb123265b1038a045f73 333 Gene3D G3DSA:3.40.50.2300 61 313 1.5E-73 T 14-10-2018 Amir_1871 c959840e82d0fb123265b1038a045f73 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 Amir_1871 c959840e82d0fb123265b1038a045f73 333 SMART SM00354 2 72 2.8E-23 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1871 c959840e82d0fb123265b1038a045f73 333 Gene3D G3DSA:3.40.50.2300 157 289 1.5E-73 T 14-10-2018 Amir_1871 c959840e82d0fb123265b1038a045f73 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 6.1E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1871 c959840e82d0fb123265b1038a045f73 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 6.1E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1390 ee1a285356521a82b35cabacd60078be 468 Pfam PF14417 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 165 306 1.4E-19 T 14-10-2018 IPR025847 MEDS domain Amir_1390 ee1a285356521a82b35cabacd60078be 468 Pfam PF13581 Histidine kinase-like ATPase domain 350 456 5.5E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_1390 ee1a285356521a82b35cabacd60078be 468 Gene3D G3DSA:3.30.565.10 342 463 4.0E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1390 ee1a285356521a82b35cabacd60078be 468 SUPERFAMILY SSF55874 367 457 2.58E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4415 c9e6d2717aaf9544031f213c85586f57 83 PRINTS PR01249 Ribosomal protein L31 signature 60 78 8.7E-19 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_4415 c9e6d2717aaf9544031f213c85586f57 83 PRINTS PR01249 Ribosomal protein L31 signature 2 19 8.7E-19 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_4415 c9e6d2717aaf9544031f213c85586f57 83 PRINTS PR01249 Ribosomal protein L31 signature 45 60 8.7E-19 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_4415 c9e6d2717aaf9544031f213c85586f57 83 SUPERFAMILY SSF143800 2 79 3.1E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_4415 c9e6d2717aaf9544031f213c85586f57 83 Gene3D G3DSA:2.30.170.50 1 83 5.0E-27 T 14-10-2018 Amir_4415 c9e6d2717aaf9544031f213c85586f57 83 Pfam PF01197 Ribosomal protein L31 2 79 5.8E-32 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_4415 c9e6d2717aaf9544031f213c85586f57 83 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 25.512 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_4415 c9e6d2717aaf9544031f213c85586f57 83 TIGRFAM TIGR00105 L31: ribosomal protein bL31 2 80 8.7E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_4415 c9e6d2717aaf9544031f213c85586f57 83 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6884 9733b94017e1fa48f1be060f0a66161f 285 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 276 3.1E-36 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_6884 9733b94017e1fa48f1be060f0a66161f 285 Gene3D G3DSA:3.40.190.10 137 241 3.3E-40 T 14-10-2018 Amir_6884 9733b94017e1fa48f1be060f0a66161f 285 SMART SM00062 50 278 4.0E-22 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_6884 9733b94017e1fa48f1be060f0a66161f 285 SMART SM00079 50 277 0.0085 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Amir_6884 9733b94017e1fa48f1be060f0a66161f 285 SUPERFAMILY SSF53850 5 275 6.29E-43 T 14-10-2018 Amir_6884 9733b94017e1fa48f1be060f0a66161f 285 Gene3D G3DSA:3.40.190.10 48 275 3.3E-40 T 14-10-2018 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 342 351 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 PRINTS PR00385 P450 superfamily signature 273 284 1.2E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 PRINTS PR00385 P450 superfamily signature 340 349 1.2E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 PRINTS PR00385 P450 superfamily signature 238 255 1.2E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 PRINTS PR00385 P450 superfamily signature 349 360 1.2E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 PRINTS PR00359 B-class P450 signature 273 284 5.1E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 PRINTS PR00359 B-class P450 signature 95 106 5.1E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 PRINTS PR00359 B-class P450 signature 291 318 5.1E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 PRINTS PR00359 B-class P450 signature 159 174 5.1E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 PRINTS PR00359 B-class P450 signature 142 158 5.1E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 PRINTS PR00359 B-class P450 signature 349 360 5.1E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 PRINTS PR00359 B-class P450 signature 340 349 5.1E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 PRINTS PR00359 B-class P450 signature 319 334 5.1E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 PRINTS PR00359 B-class P450 signature 196 218 5.1E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 SUPERFAMILY SSF48264 15 399 1.44E-98 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 Gene3D G3DSA:1.10.630.10 11 399 2.8E-121 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 Pfam PF00067 Cytochrome P450 45 167 2.0E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1961 d2ee0f6f5e493564cce00600531bcdf9 399 Pfam PF00067 Cytochrome P450 220 370 4.3E-20 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_0441 62988111d6bf358f90c3df92be8584a4 444 Gene3D G3DSA:3.30.200.20 4 91 9.8E-27 T 14-10-2018 Amir_0441 62988111d6bf358f90c3df92be8584a4 444 Gene3D G3DSA:1.10.510.10 94 282 5.2E-40 T 14-10-2018 Amir_0441 62988111d6bf358f90c3df92be8584a4 444 Pfam PF00069 Protein kinase domain 13 261 2.5E-41 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_0441 62988111d6bf358f90c3df92be8584a4 444 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 131 143 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_0441 62988111d6bf358f90c3df92be8584a4 444 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 19 42 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_0441 62988111d6bf358f90c3df92be8584a4 444 SUPERFAMILY SSF56112 9 273 1.62E-64 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_0441 62988111d6bf358f90c3df92be8584a4 444 SMART SM00220 13 267 2.8E-50 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_6075 c634dd936744b158258434a9417b97d4 822 Gene3D G3DSA:3.20.20.80 221 620 8.4E-176 T 14-10-2018 Amir_6075 c634dd936744b158258434a9417b97d4 822 SUPERFAMILY SSF81296 137 198 1.68E-10 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_6075 c634dd936744b158258434a9417b97d4 822 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 103 721 7.9E-284 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Amir_6075 c634dd936744b158258434a9417b97d4 822 SUPERFAMILY SSF51445 178 614 1.87E-113 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_6075 c634dd936744b158258434a9417b97d4 822 Gene3D G3DSA:2.60.40.1180 621 724 4.2E-40 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_6075 c634dd936744b158258434a9417b97d4 822 SMART SM00642 248 594 1.7E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_6075 c634dd936744b158258434a9417b97d4 822 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 95 724 44.876 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Amir_6075 c634dd936744b158258434a9417b97d4 822 PIRSF PIRSF000463 5 733 6.2E-293 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Amir_6075 c634dd936744b158258434a9417b97d4 822 Pfam PF00128 Alpha amylase, catalytic domain 274 343 5.9E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_6075 c634dd936744b158258434a9417b97d4 822 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 119 205 3.2E-22 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Amir_6075 c634dd936744b158258434a9417b97d4 822 SUPERFAMILY SSF81296 13 108 1.34E-18 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_6075 c634dd936744b158258434a9417b97d4 822 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 626 723 1.0E-21 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Amir_6075 c634dd936744b158258434a9417b97d4 822 Gene3D G3DSA:2.60.40.10 2 220 2.2E-77 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_6075 c634dd936744b158258434a9417b97d4 822 SUPERFAMILY SSF51011 621 725 2.64E-35 T 14-10-2018 Amir_6858 bcdbecb99bfd6a8ff85473571cf089ca 357 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 352 41.904 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amir_6858 bcdbecb99bfd6a8ff85473571cf089ca 357 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 13 343 5.3E-136 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amir_6858 bcdbecb99bfd6a8ff85473571cf089ca 357 Pfam PF02769 AIR synthase related protein, C-terminal domain 182 348 9.3E-34 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Amir_6858 bcdbecb99bfd6a8ff85473571cf089ca 357 SUPERFAMILY SSF55326 12 174 3.14E-45 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amir_6858 bcdbecb99bfd6a8ff85473571cf089ca 357 Pfam PF00586 AIR synthase related protein, N-terminal domain 67 170 4.1E-15 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Amir_6858 bcdbecb99bfd6a8ff85473571cf089ca 357 Gene3D G3DSA:3.90.650.10 178 352 1.1E-60 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amir_6858 bcdbecb99bfd6a8ff85473571cf089ca 357 SUPERFAMILY SSF56042 178 349 8.37E-55 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amir_6858 bcdbecb99bfd6a8ff85473571cf089ca 357 Gene3D G3DSA:3.30.1330.10 10 176 7.8E-61 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amir_4653 3d9023245f2ac0e5a79292eb9224acf9 349 Gene3D G3DSA:3.40.50.970 78 138 1.4E-6 T 14-10-2018 Amir_4653 3d9023245f2ac0e5a79292eb9224acf9 349 Gene3D G3DSA:3.40.50.920 220 340 1.7E-26 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_4653 3d9023245f2ac0e5a79292eb9224acf9 349 Pfam PF02780 Transketolase, C-terminal domain 224 323 6.7E-23 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Amir_4653 3d9023245f2ac0e5a79292eb9224acf9 349 SUPERFAMILY SSF52518 13 132 1.77E-8 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_4653 3d9023245f2ac0e5a79292eb9224acf9 349 SUPERFAMILY SSF52922 220 322 6.15E-24 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_3594 c2f6e3e31f8c36760f8c23971c7e5e86 278 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 23 36 1.6E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3594 c2f6e3e31f8c36760f8c23971c7e5e86 278 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 1.6E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3594 c2f6e3e31f8c36760f8c23971c7e5e86 278 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 12 23 1.6E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3594 c2f6e3e31f8c36760f8c23971c7e5e86 278 SUPERFAMILY SSF46955 12 114 9.16E-23 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_3594 c2f6e3e31f8c36760f8c23971c7e5e86 278 Gene3D G3DSA:1.10.1660.10 10 116 2.6E-23 T 14-10-2018 Amir_3594 c2f6e3e31f8c36760f8c23971c7e5e86 278 Pfam PF00376 MerR family regulatory protein 12 49 1.3E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3594 c2f6e3e31f8c36760f8c23971c7e5e86 278 SMART SM00422 11 80 1.7E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4702 8f26f3646e37eca8101f0d80c458ff7b 283 SUPERFAMILY SSF51735 4 270 6.49E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4702 8f26f3646e37eca8101f0d80c458ff7b 283 Gene3D G3DSA:3.40.50.720 9 260 2.2E-57 T 14-10-2018 Amir_4702 8f26f3646e37eca8101f0d80c458ff7b 283 Gene3D G3DSA:3.90.25.10 129 262 2.2E-57 T 14-10-2018 Amir_4702 8f26f3646e37eca8101f0d80c458ff7b 283 Pfam PF13460 NAD(P)H-binding 12 177 6.9E-11 T 14-10-2018 IPR016040 NAD(P)-binding domain Amir_3704 1cc286dad9bba4d2ea1f46edb3d91aea 328 Gene3D G3DSA:3.40.190.150 40 318 9.2E-67 T 14-10-2018 Amir_3704 1cc286dad9bba4d2ea1f46edb3d91aea 328 Gene3D G3DSA:3.40.190.10 131 253 9.2E-67 T 14-10-2018 Amir_3704 1cc286dad9bba4d2ea1f46edb3d91aea 328 SUPERFAMILY SSF53850 56 291 8.5E-17 T 14-10-2018 Amir_3704 1cc286dad9bba4d2ea1f46edb3d91aea 328 PIRSF PIRSF017082 1 328 1.5E-89 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Amir_3704 1cc286dad9bba4d2ea1f46edb3d91aea 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 66 325 8.5E-32 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Amir_5860 d402a15a9867b4d63d1f4c47e9804c97 204 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 19 204 3.6E-74 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Amir_5860 d402a15a9867b4d63d1f4c47e9804c97 204 PIRSF PIRSF015617 1 204 6.4E-62 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Amir_5860 d402a15a9867b4d63d1f4c47e9804c97 204 Gene3D G3DSA:3.40.50.300 6 204 1.5E-57 T 14-10-2018 Amir_5860 d402a15a9867b4d63d1f4c47e9804c97 204 SUPERFAMILY SSF52540 12 204 4.88E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5860 d402a15a9867b4d63d1f4c47e9804c97 204 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 22 204 6.9E-56 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Amir_2079 f138f4fb34f8d788f9d98a0e0aa9b458 255 SUPERFAMILY SSF51735 6 247 2.8E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2079 f138f4fb34f8d788f9d98a0e0aa9b458 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2079 f138f4fb34f8d788f9d98a0e0aa9b458 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2079 f138f4fb34f8d788f9d98a0e0aa9b458 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 6.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2079 f138f4fb34f8d788f9d98a0e0aa9b458 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 6.4E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2079 f138f4fb34f8d788f9d98a0e0aa9b458 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.4E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2079 f138f4fb34f8d788f9d98a0e0aa9b458 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 6.4E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2079 f138f4fb34f8d788f9d98a0e0aa9b458 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.4E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2079 f138f4fb34f8d788f9d98a0e0aa9b458 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.4E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2079 f138f4fb34f8d788f9d98a0e0aa9b458 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 6.4E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2079 f138f4fb34f8d788f9d98a0e0aa9b458 255 Gene3D G3DSA:3.40.50.720 3 255 4.1E-87 T 14-10-2018 Amir_2079 f138f4fb34f8d788f9d98a0e0aa9b458 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 248 5.0E-69 T 14-10-2018 Amir_4920 e4d9b26e064cb27584d66ab13c0a340d 366 Gene3D G3DSA:1.10.1240.10 12 86 5.1E-12 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_4920 e4d9b26e064cb27584d66ab13c0a340d 366 Pfam PF02607 B12 binding domain 16 85 1.4E-11 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_4920 e4d9b26e064cb27584d66ab13c0a340d 366 Gene3D G3DSA:3.40.50.280 89 212 1.0E-25 T 14-10-2018 Amir_4920 e4d9b26e064cb27584d66ab13c0a340d 366 Pfam PF02310 B12 binding domain 97 206 1.3E-15 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amir_4920 e4d9b26e064cb27584d66ab13c0a340d 366 SUPERFAMILY SSF52242 95 212 6.8E-21 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amir_0163 309c67c3f4e79feacef7ca5f5934132f 207 Pfam PF06475 Putative glycolipid-binding 23 206 2.2E-46 T 14-10-2018 IPR009467 Putative glycolipid-binding protein Amir_0163 309c67c3f4e79feacef7ca5f5934132f 207 SUPERFAMILY SSF159275 21 207 2.22E-43 T 14-10-2018 Amir_6289 530cb4a5cda27b38200142d5656960fc 84 Pfam PF02467 Transcription factor WhiB 3 71 2.6E-27 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain Amir_6289 530cb4a5cda27b38200142d5656960fc 84 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 76 18.807 T 14-10-2018 IPR003482 Transcription factor WhiB Amir_0949 93478d693e7d383e23dd3d31228fdf39 416 SUPERFAMILY SSF55874 301 413 5.45E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0949 93478d693e7d383e23dd3d31228fdf39 416 Gene3D G3DSA:3.30.565.10 298 414 4.5E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0949 93478d693e7d383e23dd3d31228fdf39 416 Pfam PF07730 Histidine kinase 226 292 7.1E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_0949 93478d693e7d383e23dd3d31228fdf39 416 Pfam PF13796 Putative sensor 15 197 3.1E-25 T 14-10-2018 IPR025828 Putative sensor domain Amir_4208 2c3a004911c9fa3fdcc4cc5ae181db5c 645 Pfam PF07883 Cupin domain 39 105 6.8E-13 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Amir_4208 2c3a004911c9fa3fdcc4cc5ae181db5c 645 Gene3D G3DSA:3.40.50.620 130 474 2.9E-86 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_4208 2c3a004911c9fa3fdcc4cc5ae181db5c 645 Gene3D G3DSA:2.60.120.10 2 115 1.3E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_4208 2c3a004911c9fa3fdcc4cc5ae181db5c 645 Pfam PF09334 tRNA synthetases class I (M) 130 483 2.8E-57 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_4208 2c3a004911c9fa3fdcc4cc5ae181db5c 645 Gene3D G3DSA:2.20.28.20 265 298 2.9E-86 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amir_4208 2c3a004911c9fa3fdcc4cc5ae181db5c 645 SUPERFAMILY SSF52374 127 483 4.22E-54 T 14-10-2018 Amir_4208 2c3a004911c9fa3fdcc4cc5ae181db5c 645 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 136 147 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_4208 2c3a004911c9fa3fdcc4cc5ae181db5c 645 Gene3D G3DSA:1.10.730.10 495 645 2.4E-7 T 14-10-2018 Amir_4208 2c3a004911c9fa3fdcc4cc5ae181db5c 645 SUPERFAMILY SSF51182 32 110 5.94E-16 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_4208 2c3a004911c9fa3fdcc4cc5ae181db5c 645 SUPERFAMILY SSF47323 509 642 1.67E-7 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_4347 88a66c4ac6722effb9d84fd1c300cfa9 1008 SMART SM00382 354 498 0.0049 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4347 88a66c4ac6722effb9d84fd1c300cfa9 1008 SUPERFAMILY SSF52540 352 511 4.94E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4347 88a66c4ac6722effb9d84fd1c300cfa9 1008 Pfam PF05729 NACHT domain 357 511 1.5E-6 T 14-10-2018 IPR007111 NACHT nucleoside triphosphatase Amir_4347 88a66c4ac6722effb9d84fd1c300cfa9 1008 Gene3D G3DSA:3.40.50.300 333 484 1.2E-6 T 14-10-2018 Amir_5519 18754649bf4afe5b21b882cc196b6e58 173 SUPERFAMILY SSF159234 7 168 4.97E-32 T 14-10-2018 IPR035930 FomD-like superfamily Amir_5519 18754649bf4afe5b21b882cc196b6e58 173 Gene3D G3DSA:2.40.380.10 1 165 2.8E-41 T 14-10-2018 IPR035930 FomD-like superfamily Amir_4626 ed7ed7e1698adeea3b525b3aa03f534f 537 Pfam PF00501 AMP-binding enzyme 48 434 8.4E-55 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4626 ed7ed7e1698adeea3b525b3aa03f534f 537 ProSitePatterns PS00455 Putative AMP-binding domain signature. 177 188 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4626 ed7ed7e1698adeea3b525b3aa03f534f 537 Gene3D G3DSA:3.40.50.12780 27 433 2.1E-61 T 14-10-2018 Amir_4626 ed7ed7e1698adeea3b525b3aa03f534f 537 SUPERFAMILY SSF56801 47 525 2.75E-69 T 14-10-2018 Amir_0484 ae1b26ff75d1a4c92ebd38e9ac2f85fb 259 Pfam PF05096 Glutamine cyclotransferase 27 256 9.9E-96 T 14-10-2018 IPR007788 Glutaminyl-peptide cyclotransferase GO:0016603|GO:0017186 MetaCyc: PWY-7942 Amir_0484 ae1b26ff75d1a4c92ebd38e9ac2f85fb 259 SUPERFAMILY SSF50969 34 245 3.41E-14 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Amir_0484 ae1b26ff75d1a4c92ebd38e9ac2f85fb 259 Gene3D G3DSA:2.130.10.10 28 251 1.2E-7 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_4017 d22d085b7efe2370024bcd86f6a25812 267 Pfam PF00106 short chain dehydrogenase 5 134 1.8E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4017 d22d085b7efe2370024bcd86f6a25812 267 SUPERFAMILY SSF51735 2 230 3.05E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4017 d22d085b7efe2370024bcd86f6a25812 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.2E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4017 d22d085b7efe2370024bcd86f6a25812 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.2E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4017 d22d085b7efe2370024bcd86f6a25812 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 3.2E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4017 d22d085b7efe2370024bcd86f6a25812 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 3.2E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4017 d22d085b7efe2370024bcd86f6a25812 267 Gene3D G3DSA:3.40.50.720 1 267 9.6E-50 T 14-10-2018 Amir_2628 9cfa2c1ed8fe6ab61d1e188a41c36f61 275 Gene3D G3DSA:3.40.50.300 3 258 4.2E-58 T 14-10-2018 Amir_2628 9cfa2c1ed8fe6ab61d1e188a41c36f61 275 SMART SM00382 34 243 1.2E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2628 9cfa2c1ed8fe6ab61d1e188a41c36f61 275 SUPERFAMILY SSF52540 6 251 1.74E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2628 9cfa2c1ed8fe6ab61d1e188a41c36f61 275 Pfam PF00005 ABC transporter 25 180 7.1E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2628 9cfa2c1ed8fe6ab61d1e188a41c36f61 275 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_4077 747b87a5c9663a09064563f4c35bedb9 356 Gene3D G3DSA:3.40.50.150 123 353 9.0E-41 T 14-10-2018 Amir_4077 747b87a5c9663a09064563f4c35bedb9 356 Gene3D G3DSA:1.10.10.10 30 111 2.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4077 747b87a5c9663a09064563f4c35bedb9 356 SUPERFAMILY SSF53335 123 339 1.11E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_4077 747b87a5c9663a09064563f4c35bedb9 356 Pfam PF16864 Dimerisation domain 37 113 1.2E-14 T 14-10-2018 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain Amir_4077 747b87a5c9663a09064563f4c35bedb9 356 SUPERFAMILY SSF46785 35 115 7.42E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4077 747b87a5c9663a09064563f4c35bedb9 356 Pfam PF00891 O-methyltransferase 153 308 1.3E-18 T 14-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 Amir_4345 4a36e74b50315496a36ee604ad94445a 406 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Amir_4345 4a36e74b50315496a36ee604ad94445a 406 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 23 398 2.2E-90 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Amir_4345 4a36e74b50315496a36ee604ad94445a 406 Pfam PF07690 Major Facilitator Superfamily 34 369 8.5E-41 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_4345 4a36e74b50315496a36ee604ad94445a 406 SUPERFAMILY SSF103473 10 402 1.57E-58 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4345 4a36e74b50315496a36ee604ad94445a 406 Gene3D G3DSA:1.20.1720.10 24 402 1.7E-100 T 14-10-2018 Amir_5898 f397efd098f3e6f08e9399fb945ba158 371 Gene3D G3DSA:2.40.50.140 291 357 2.8E-13 T 14-10-2018 Amir_5898 f397efd098f3e6f08e9399fb945ba158 371 Gene3D G3DSA:3.40.50.300 10 227 5.3E-63 T 14-10-2018 Amir_5898 f397efd098f3e6f08e9399fb945ba158 371 SMART SM00382 34 263 2.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5898 f397efd098f3e6f08e9399fb945ba158 371 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 40 365 8.2E-115 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 Amir_5898 f397efd098f3e6f08e9399fb945ba158 371 SUPERFAMILY SSF52540 11 248 4.8E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5898 f397efd098f3e6f08e9399fb945ba158 371 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_5898 f397efd098f3e6f08e9399fb945ba158 371 SUPERFAMILY SSF50331 243 364 1.52E-19 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Amir_5898 f397efd098f3e6f08e9399fb945ba158 371 Pfam PF00005 ABC transporter 26 167 3.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5898 f397efd098f3e6f08e9399fb945ba158 371 Pfam PF08402 TOBE domain 285 365 5.8E-18 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Amir_5898 f397efd098f3e6f08e9399fb945ba158 371 Gene3D G3DSA:2.40.50.940 228 362 2.8E-13 T 14-10-2018 Amir_0606 aa75b0ae3756b1782e818f50ced4c753 55 SUPERFAMILY SSF57829 5 55 1.16E-16 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Amir_0606 aa75b0ae3756b1782e818f50ced4c753 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 6 55 6.7E-22 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0606 aa75b0ae3756b1782e818f50ced4c753 55 Pfam PF00471 Ribosomal protein L33 10 55 7.9E-16 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0606 aa75b0ae3756b1782e818f50ced4c753 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 23 42 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_0606 aa75b0ae3756b1782e818f50ced4c753 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 7 55 14.008 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0606 aa75b0ae3756b1782e818f50ced4c753 55 Gene3D G3DSA:2.20.28.120 1 55 5.2E-24 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_3707 5c440eaf8946e32a74841c5255a4cca1 129 Gene3D G3DSA:3.30.70.1060 2 128 3.0E-17 T 14-10-2018 Amir_3707 5c440eaf8946e32a74841c5255a4cca1 129 Pfam PF03795 YCII-related domain 28 107 1.3E-6 T 14-10-2018 IPR005545 YCII-related Amir_3707 5c440eaf8946e32a74841c5255a4cca1 129 SUPERFAMILY SSF54909 21 123 1.55E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_3131 ebcfb8417e42b1b9f29bbb837d84a51e 321 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 229 319 3.0E-25 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Amir_3131 ebcfb8417e42b1b9f29bbb837d84a51e 321 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 104 182 5.1E-23 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Amir_3131 ebcfb8417e42b1b9f29bbb837d84a51e 321 SUPERFAMILY SSF53901 22 319 7.54E-55 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_3131 ebcfb8417e42b1b9f29bbb837d84a51e 321 Gene3D G3DSA:3.40.47.10 1 320 5.4E-89 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Amir_5711 b251c5a5ed2b9180a1baedb5785edba5 240 SUPERFAMILY SSF81923 88 219 2.75E-19 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Amir_5711 b251c5a5ed2b9180a1baedb5785edba5 240 Gene3D G3DSA:1.10.1780.10 86 229 3.8E-36 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Amir_5711 b251c5a5ed2b9180a1baedb5785edba5 240 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 105 147 5.3E-6 T 14-10-2018 IPR004176 Clp, N-terminal Amir_5711 b251c5a5ed2b9180a1baedb5785edba5 240 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 174 223 8.3E-13 T 14-10-2018 IPR004176 Clp, N-terminal Amir_4181 971f6c1b2fb0919445c22d28f1b1e845 259 SUPERFAMILY SSF55920 2 253 2.62E-69 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Amir_4181 971f6c1b2fb0919445c22d28f1b1e845 259 Pfam PF00557 Metallopeptidase family M24 13 245 1.3E-42 T 14-10-2018 IPR000994 Peptidase M24 Amir_4181 971f6c1b2fb0919445c22d28f1b1e845 259 Gene3D G3DSA:3.90.230.10 1 258 1.4E-78 T 14-10-2018 Amir_4181 971f6c1b2fb0919445c22d28f1b1e845 259 Hamap MF_01974 Methionine aminopeptidase [map]. 2 254 32.244 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_4181 971f6c1b2fb0919445c22d28f1b1e845 259 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 253 5.4E-72 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_4181 971f6c1b2fb0919445c22d28f1b1e845 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 95 111 7.6E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_4181 971f6c1b2fb0919445c22d28f1b1e845 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 73 86 7.6E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_4181 971f6c1b2fb0919445c22d28f1b1e845 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 7.6E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_4181 971f6c1b2fb0919445c22d28f1b1e845 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 165 177 7.6E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_1733 3c7c9ebe340ccbf4677555fb139ab3eb 324 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 246 7.3E-50 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_1733 3c7c9ebe340ccbf4677555fb139ab3eb 324 Gene3D G3DSA:3.90.25.10 183 315 9.5E-83 T 14-10-2018 Amir_1733 3c7c9ebe340ccbf4677555fb139ab3eb 324 SUPERFAMILY SSF51735 4 319 2.97E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1733 3c7c9ebe340ccbf4677555fb139ab3eb 324 Gene3D G3DSA:3.40.50.720 9 305 9.5E-83 T 14-10-2018 Amir_1315 e6440f4475ec5465e455df899985fe60 459 Gene3D G3DSA:3.50.50.60 6 321 8.2E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1315 e6440f4475ec5465e455df899985fe60 459 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 311 1.7E-49 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_1315 e6440f4475ec5465e455df899985fe60 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 6.1E-56 T 14-10-2018 Amir_1315 e6440f4475ec5465e455df899985fe60 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 296 303 6.1E-56 T 14-10-2018 Amir_1315 e6440f4475ec5465e455df899985fe60 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 6.1E-56 T 14-10-2018 Amir_1315 e6440f4475ec5465e455df899985fe60 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 6.1E-56 T 14-10-2018 Amir_1315 e6440f4475ec5465e455df899985fe60 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 6.1E-56 T 14-10-2018 Amir_1315 e6440f4475ec5465e455df899985fe60 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 6.1E-56 T 14-10-2018 Amir_1315 e6440f4475ec5465e455df899985fe60 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 6.1E-56 T 14-10-2018 Amir_1315 e6440f4475ec5465e455df899985fe60 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 6.1E-56 T 14-10-2018 Amir_1315 e6440f4475ec5465e455df899985fe60 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 448 6.1E-56 T 14-10-2018 Amir_1315 e6440f4475ec5465e455df899985fe60 459 Gene3D G3DSA:3.30.390.30 344 458 1.3E-29 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amir_1315 e6440f4475ec5465e455df899985fe60 459 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 450 7.1E-25 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Amir_1315 e6440f4475ec5465e455df899985fe60 459 PIRSF PIRSF000350 2 455 2.9E-72 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Amir_1315 e6440f4475ec5465e455df899985fe60 459 SUPERFAMILY SSF51905 4 324 8.1E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1315 e6440f4475ec5465e455df899985fe60 459 Gene3D G3DSA:3.50.50.60 150 267 8.2E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1315 e6440f4475ec5465e455df899985fe60 459 SUPERFAMILY SSF55424 341 456 4.12E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amir_1315 e6440f4475ec5465e455df899985fe60 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 2.8E-23 T 14-10-2018 Amir_1315 e6440f4475ec5465e455df899985fe60 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 2.8E-23 T 14-10-2018 Amir_1315 e6440f4475ec5465e455df899985fe60 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.8E-23 T 14-10-2018 Amir_1315 e6440f4475ec5465e455df899985fe60 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 281 303 2.8E-23 T 14-10-2018 Amir_1315 e6440f4475ec5465e455df899985fe60 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 2.8E-23 T 14-10-2018 Amir_1442 cb0415490e57747c6c46e5e887cb0389 448 Pfam PF03993 Domain of Unknown Function (DUF349) 290 363 5.6E-21 T 14-10-2018 IPR007139 Protein of unknown function DUF349 Amir_1442 cb0415490e57747c6c46e5e887cb0389 448 Pfam PF03993 Domain of Unknown Function (DUF349) 214 286 1.6E-20 T 14-10-2018 IPR007139 Protein of unknown function DUF349 Amir_1442 cb0415490e57747c6c46e5e887cb0389 448 Pfam PF03993 Domain of Unknown Function (DUF349) 136 209 4.6E-13 T 14-10-2018 IPR007139 Protein of unknown function DUF349 Amir_0129 ff6aeb4bf47dec2a0dc4269a2a41abff 267 Gene3D G3DSA:2.60.40.10 28 139 1.9E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_0129 ff6aeb4bf47dec2a0dc4269a2a41abff 267 SUPERFAMILY SSF117074 25 81 2.48E-7 T 14-10-2018 Amir_0129 ff6aeb4bf47dec2a0dc4269a2a41abff 267 Pfam PF17210 SdrD B-like domain 33 93 4.2E-8 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_0790 553ad89d7d20284d6fd92722d5fcf248 361 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 74 2.5E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_0790 553ad89d7d20284d6fd92722d5fcf248 361 SUPERFAMILY SSF46785 17 122 2.6E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0790 553ad89d7d20284d6fd92722d5fcf248 361 Gene3D G3DSA:3.40.190.10 95 169 2.1E-14 T 14-10-2018 Amir_0790 553ad89d7d20284d6fd92722d5fcf248 361 Gene3D G3DSA:3.40.190.290 197 346 1.3E-33 T 14-10-2018 Amir_0790 553ad89d7d20284d6fd92722d5fcf248 361 SUPERFAMILY SSF53850 100 338 8.42E-36 T 14-10-2018 Amir_0790 553ad89d7d20284d6fd92722d5fcf248 361 Gene3D G3DSA:1.10.10.10 14 94 1.9E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0790 553ad89d7d20284d6fd92722d5fcf248 361 Pfam PF03466 LysR substrate binding domain 100 165 6.9E-12 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_0790 553ad89d7d20284d6fd92722d5fcf248 361 Pfam PF03466 LysR substrate binding domain 205 337 2.6E-30 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_0868 f8d8df0c4973e7cbc171ea1bac35ff62 351 SUPERFAMILY SSF51556 50 310 2.67E-45 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_0868 f8d8df0c4973e7cbc171ea1bac35ff62 351 SUPERFAMILY SSF51338 2 340 5.76E-11 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_0868 f8d8df0c4973e7cbc171ea1bac35ff62 351 Pfam PF01979 Amidohydrolase family 47 345 3.0E-16 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_0868 f8d8df0c4973e7cbc171ea1bac35ff62 351 Gene3D G3DSA:3.20.20.140 53 309 1.4E-48 T 14-10-2018 Amir_0695 9c095c6183d387cf782fc7b788277d11 228 SUPERFAMILY SSF63817 85 223 7.19E-11 T 14-10-2018 IPR023365 Sortase domain superfamily Amir_0695 9c095c6183d387cf782fc7b788277d11 228 Gene3D G3DSA:2.40.260.10 85 227 4.7E-14 T 14-10-2018 IPR023365 Sortase domain superfamily Amir_0695 9c095c6183d387cf782fc7b788277d11 228 Pfam PF04203 Sortase family 129 225 3.9E-10 T 14-10-2018 IPR005754 Sortase family Amir_2006 5bc992e437fb68648ec79d3782da20fe 422 SUPERFAMILY SSF51621 6 421 1.61E-154 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Amir_2006 5bc992e437fb68648ec79d3782da20fe 422 Gene3D G3DSA:3.20.20.60 3 405 3.3E-170 T 14-10-2018 Amir_2006 5bc992e437fb68648ec79d3782da20fe 422 Pfam PF00463 Isocitrate lyase family 9 245 1.6E-53 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Amir_2006 5bc992e437fb68648ec79d3782da20fe 422 Pfam PF00463 Isocitrate lyase family 246 412 1.5E-47 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Amir_2006 5bc992e437fb68648ec79d3782da20fe 422 PIRSF PIRSF001362 1 422 8.7E-234 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Amir_2006 5bc992e437fb68648ec79d3782da20fe 422 ProSitePatterns PS00161 Isocitrate lyase signature. 183 188 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 Amir_2006 5bc992e437fb68648ec79d3782da20fe 422 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 5 245 7.0E-106 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Amir_1763 5ddb78fd7f25418b7edccde392cf9e65 341 PRINTS PR00069 Aldo-keto reductase signature 137 154 1.7E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_1763 5ddb78fd7f25418b7edccde392cf9e65 341 PRINTS PR00069 Aldo-keto reductase signature 42 66 1.7E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_1763 5ddb78fd7f25418b7edccde392cf9e65 341 PRINTS PR00069 Aldo-keto reductase signature 106 124 1.7E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_1763 5ddb78fd7f25418b7edccde392cf9e65 341 Pfam PF00248 Aldo/keto reductase family 19 314 4.5E-72 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_1763 5ddb78fd7f25418b7edccde392cf9e65 341 Gene3D G3DSA:3.20.20.100 4 323 1.3E-113 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_1763 5ddb78fd7f25418b7edccde392cf9e65 341 SUPERFAMILY SSF51430 6 316 4.45E-96 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_2464 15763b849e89edd96b030aa64b1c4b39 229 Gene3D G3DSA:3.40.50.2300 1 127 2.6E-37 T 14-10-2018 Amir_2464 15763b849e89edd96b030aa64b1c4b39 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 223 2.2E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2464 15763b849e89edd96b030aa64b1c4b39 229 Pfam PF00072 Response regulator receiver domain 4 113 3.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2464 15763b849e89edd96b030aa64b1c4b39 229 Gene3D G3DSA:1.10.10.10 128 226 2.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2464 15763b849e89edd96b030aa64b1c4b39 229 SMART SM00862 149 224 2.1E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2464 15763b849e89edd96b030aa64b1c4b39 229 SUPERFAMILY SSF52172 2 175 7.97E-41 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2464 15763b849e89edd96b030aa64b1c4b39 229 SMART SM00448 2 112 1.4E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0658 9429c5610b79b0b9b9b70d5446a6ab8d 547 SMART SM00267 374 539 2.4E-48 T 14-10-2018 IPR000160 GGDEF domain Amir_0658 9429c5610b79b0b9b9b70d5446a6ab8d 547 Gene3D G3DSA:1.25.40.10 26 247 2.4E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0658 9429c5610b79b0b9b9b70d5446a6ab8d 547 SUPERFAMILY SSF55073 390 538 1.8E-39 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_0658 9429c5610b79b0b9b9b70d5446a6ab8d 547 SUPERFAMILY SSF48452 95 223 3.57E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0658 9429c5610b79b0b9b9b70d5446a6ab8d 547 Pfam PF00990 Diguanylate cyclase, GGDEF domain 385 533 2.7E-37 T 14-10-2018 IPR000160 GGDEF domain Amir_0658 9429c5610b79b0b9b9b70d5446a6ab8d 547 Gene3D G3DSA:3.30.70.270 371 539 3.1E-48 T 14-10-2018 Amir_0658 9429c5610b79b0b9b9b70d5446a6ab8d 547 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 382 536 6.4E-39 T 14-10-2018 IPR000160 GGDEF domain Amir_3165 429d5902d137e360029e3d928f9c27bf 334 Gene3D G3DSA:3.90.226.40 1 334 8.2E-120 T 14-10-2018 Amir_3165 429d5902d137e360029e3d928f9c27bf 334 Pfam PF16113 Enoyl-CoA hydratase/isomerase 13 334 1.8E-117 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 Amir_3165 429d5902d137e360029e3d928f9c27bf 334 SUPERFAMILY SSF52096 3 319 2.67E-57 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_6262 3ded7b0ea7751439ca77632070ac193c 381 TIGRFAM TIGR01224 hutI: imidazolonepropionase 22 377 1.1E-101 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amir_6262 3ded7b0ea7751439ca77632070ac193c 381 SUPERFAMILY SSF51338 12 71 2.56E-10 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_6262 3ded7b0ea7751439ca77632070ac193c 381 SUPERFAMILY SSF51338 320 377 4.46E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_6262 3ded7b0ea7751439ca77632070ac193c 381 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 380 41.254 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amir_6262 3ded7b0ea7751439ca77632070ac193c 381 Gene3D G3DSA:2.30.40.10 16 377 6.5E-122 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_6262 3ded7b0ea7751439ca77632070ac193c 381 SUPERFAMILY SSF51556 58 338 2.23E-69 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_6262 3ded7b0ea7751439ca77632070ac193c 381 Pfam PF01979 Amidohydrolase family 56 354 8.1E-15 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_6262 3ded7b0ea7751439ca77632070ac193c 381 Gene3D G3DSA:3.20.20.140 59 340 6.5E-122 T 14-10-2018 Amir_5822 10785d8709953f54dc355bc821539aac 461 SUPERFAMILY SSF63411 267 451 1.32E-48 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amir_5822 10785d8709953f54dc355bc821539aac 461 Pfam PF05193 Peptidase M16 inactive domain 201 380 9.0E-40 T 14-10-2018 IPR007863 Peptidase M16, C-terminal Amir_5822 10785d8709953f54dc355bc821539aac 461 SUPERFAMILY SSF63411 37 240 3.14E-55 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amir_5822 10785d8709953f54dc355bc821539aac 461 Gene3D G3DSA:3.30.830.10 37 249 1.2E-66 T 14-10-2018 Amir_5822 10785d8709953f54dc355bc821539aac 461 Pfam PF00675 Insulinase (Peptidase family M16) 47 193 2.8E-39 T 14-10-2018 IPR011765 Peptidase M16, N-terminal Amir_5822 10785d8709953f54dc355bc821539aac 461 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 68 91 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 Amir_5822 10785d8709953f54dc355bc821539aac 461 Gene3D G3DSA:3.30.830.10 264 457 1.2E-56 T 14-10-2018 Amir_6835 5a11088c74d7229a590236f502b46e67 280 Pfam PF01063 Amino-transferase class IV 31 255 3.6E-40 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Amir_6835 5a11088c74d7229a590236f502b46e67 280 Gene3D G3DSA:3.20.10.10 117 280 2.2E-53 T 14-10-2018 Amir_6835 5a11088c74d7229a590236f502b46e67 280 SUPERFAMILY SSF56752 6 265 1.44E-55 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Amir_6835 5a11088c74d7229a590236f502b46e67 280 Gene3D G3DSA:3.30.470.10 2 111 1.0E-30 T 14-10-2018 Amir_2101 407f87c6a72ccea97acacfb5bf7d7af5 500 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 37 482 7.4E-130 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Amir_2101 407f87c6a72ccea97acacfb5bf7d7af5 500 Gene3D G3DSA:1.10.4160.10 22 467 7.0E-126 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily Amir_2101 407f87c6a72ccea97acacfb5bf7d7af5 500 TIGRFAM TIGR00800 ncs1: NCS1 nucleoside transporter family 32 454 6.5E-122 T 14-10-2018 IPR012681 Nucleobase cation symporter-1, NCS1 GO:0016020|GO:0022857|GO:0055085 Amir_4930 634a3e6a247f84c7a6bd740ed6bc8779 387 Gene3D G3DSA:3.40.50.300 99 177 3.1E-7 T 14-10-2018 Amir_4930 634a3e6a247f84c7a6bd740ed6bc8779 387 SMART SM00530 14 76 0.0035 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_4930 634a3e6a247f84c7a6bd740ed6bc8779 387 SUPERFAMILY SSF52540 104 315 1.06E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0457 cf49d101a94f469131e910d2ef3de81b 333 Gene3D G3DSA:3.40.190.10 38 155 4.9E-5 T 14-10-2018 Amir_0457 cf49d101a94f469131e910d2ef3de81b 333 Pfam PF13379 NMT1-like family 39 266 1.1E-19 T 14-10-2018 Amir_0457 cf49d101a94f469131e910d2ef3de81b 333 SUPERFAMILY SSF53850 40 264 8.19E-22 T 14-10-2018 Amir_0457 cf49d101a94f469131e910d2ef3de81b 333 Gene3D G3DSA:3.40.190.10 156 325 1.7E-22 T 14-10-2018 Amir_0351 6bd716a40c3b937d7104eb52fc5d22ff 366 SUPERFAMILY SSF50331 239 364 4.25E-21 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Amir_0351 6bd716a40c3b937d7104eb52fc5d22ff 366 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0351 6bd716a40c3b937d7104eb52fc5d22ff 366 SMART SM00382 31 214 4.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0351 6bd716a40c3b937d7104eb52fc5d22ff 366 Gene3D G3DSA:2.40.50.940 225 357 5.5E-27 T 14-10-2018 Amir_0351 6bd716a40c3b937d7104eb52fc5d22ff 366 Pfam PF00005 ABC transporter 23 164 5.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0351 6bd716a40c3b937d7104eb52fc5d22ff 366 Pfam PF08402 TOBE domain 282 352 3.4E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Amir_0351 6bd716a40c3b937d7104eb52fc5d22ff 366 Gene3D G3DSA:3.40.50.300 8 224 1.4E-61 T 14-10-2018 Amir_0351 6bd716a40c3b937d7104eb52fc5d22ff 366 SUPERFAMILY SSF52540 12 245 4.17E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0351 6bd716a40c3b937d7104eb52fc5d22ff 366 Gene3D G3DSA:2.40.50.140 288 347 5.5E-27 T 14-10-2018 Amir_4570 c088ec7f9f75d458f36cdc107047845d 414 Pfam PF13560 Helix-turn-helix domain 15 70 4.1E-10 T 14-10-2018 Amir_4570 c088ec7f9f75d458f36cdc107047845d 414 Gene3D G3DSA:1.10.260.40 12 82 1.6E-10 T 14-10-2018 Amir_4570 c088ec7f9f75d458f36cdc107047845d 414 SMART SM00530 20 74 1.4E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_4570 c088ec7f9f75d458f36cdc107047845d 414 SUPERFAMILY SSF47413 14 76 2.95E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1969 3b7432bb47c1fccf246d5ebe3336b38e 285 SUPERFAMILY SSF53474 32 273 5.17E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1969 3b7432bb47c1fccf246d5ebe3336b38e 285 Gene3D G3DSA:3.40.50.1820 27 285 7.1E-79 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1969 3b7432bb47c1fccf246d5ebe3336b38e 285 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 131 199 2.0E-4 T 14-10-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 Amir_6051 f52eaf14c54b5e9e776f9027f510226e 259 PIRSF PIRSF000090 1 259 2.0E-86 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Amir_6051 f52eaf14c54b5e9e776f9027f510226e 259 SUPERFAMILY SSF52402 1 253 1.12E-75 T 14-10-2018 Amir_6051 f52eaf14c54b5e9e776f9027f510226e 259 SMART SM00893 23 212 8.8E-55 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amir_6051 f52eaf14c54b5e9e776f9027f510226e 259 Pfam PF01012 Electron transfer flavoprotein domain 25 207 1.7E-49 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amir_6051 f52eaf14c54b5e9e776f9027f510226e 259 Gene3D G3DSA:3.40.50.620 1 253 3.4E-86 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_3596 b7b2477a12dbbb960dc795f37d09d95e 424 Gene3D G3DSA:3.30.9.10 148 368 9.7E-39 T 14-10-2018 Amir_3596 b7b2477a12dbbb960dc795f37d09d95e 424 Gene3D G3DSA:3.50.50.60 112 408 9.7E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3596 b7b2477a12dbbb960dc795f37d09d95e 424 SUPERFAMILY SSF54373 282 369 4.97E-9 T 14-10-2018 Amir_3596 b7b2477a12dbbb960dc795f37d09d95e 424 Gene3D G3DSA:3.50.50.60 20 73 8.7E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3596 b7b2477a12dbbb960dc795f37d09d95e 424 Pfam PF01266 FAD dependent oxidoreductase 19 407 6.8E-56 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Amir_3596 b7b2477a12dbbb960dc795f37d09d95e 424 SUPERFAMILY SSF51971 18 411 4.59E-39 T 14-10-2018 Amir_2701 3b614abbe88faa270de974248135146b 353 SUPERFAMILY SSF52266 45 331 7.16E-37 T 14-10-2018 Amir_2701 3b614abbe88faa270de974248135146b 353 Gene3D G3DSA:3.40.50.1110 41 332 2.9E-52 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_2701 3b614abbe88faa270de974248135146b 353 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 48 322 6.6E-17 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_5153 416bf83653677687dbac8a1a8872409f 390 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 107 377 9.6E-78 T 14-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 Amir_5153 416bf83653677687dbac8a1a8872409f 390 Pfam PF01458 Uncharacterized protein family (UPF0051) 140 360 5.7E-74 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 Amir_5153 416bf83653677687dbac8a1a8872409f 390 SUPERFAMILY SSF101960 35 386 3.4E-90 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Amir_0201 0a2d023e55fb70afa130b89b03dd5eb7 713 Gene3D G3DSA:1.10.8.60 11 233 1.6E-90 T 14-10-2018 Amir_0201 0a2d023e55fb70afa130b89b03dd5eb7 713 SUPERFAMILY SSF48019 250 367 1.19E-21 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Amir_0201 0a2d023e55fb70afa130b89b03dd5eb7 713 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 244 368 3.3E-14 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 Amir_0201 0a2d023e55fb70afa130b89b03dd5eb7 713 Pfam PF13177 DNA polymerase III, delta subunit 23 181 1.1E-37 T 14-10-2018 Amir_0201 0a2d023e55fb70afa130b89b03dd5eb7 713 Gene3D G3DSA:1.20.272.10 248 370 6.1E-5 T 14-10-2018 Amir_0201 0a2d023e55fb70afa130b89b03dd5eb7 713 Gene3D G3DSA:3.40.50.300 16 182 1.6E-90 T 14-10-2018 Amir_0201 0a2d023e55fb70afa130b89b03dd5eb7 713 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 8 366 7.3E-109 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Amir_0201 0a2d023e55fb70afa130b89b03dd5eb7 713 SMART SM00382 40 184 9.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0201 0a2d023e55fb70afa130b89b03dd5eb7 713 SUPERFAMILY SSF52540 37 223 3.34E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4687 f568bfc3f51454366cbe44529c9b4383 373 Gene3D G3DSA:3.40.710.10 38 367 1.9E-77 T 14-10-2018 Amir_4687 f568bfc3f51454366cbe44529c9b4383 373 SUPERFAMILY SSF56601 38 354 2.19E-59 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_4687 f568bfc3f51454366cbe44529c9b4383 373 Pfam PF00144 Beta-lactamase 53 355 1.1E-45 T 14-10-2018 IPR001466 Beta-lactamase-related Amir_3724 22115633210426a430e1d4ab1bebf215 602 Gene3D G3DSA:1.20.210.10 17 541 3.6E-203 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3724 22115633210426a430e1d4ab1bebf215 602 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 29 532 3.3E-214 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Amir_3724 22115633210426a430e1d4ab1bebf215 602 SUPERFAMILY SSF81442 26 535 2.49E-173 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3724 22115633210426a430e1d4ab1bebf215 602 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 257 311 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3724 22115633210426a430e1d4ab1bebf215 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 101 125 2.6E-97 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3724 22115633210426a430e1d4ab1bebf215 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 386 405 2.6E-97 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3724 22115633210426a430e1d4ab1bebf215 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 234 255 2.6E-97 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3724 22115633210426a430e1d4ab1bebf215 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 205 224 2.6E-97 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3724 22115633210426a430e1d4ab1bebf215 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 194 2.6E-97 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3724 22115633210426a430e1d4ab1bebf215 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 144 156 2.6E-97 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3724 22115633210426a430e1d4ab1bebf215 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 255 276 2.6E-97 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3724 22115633210426a430e1d4ab1bebf215 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 344 2.6E-97 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3724 22115633210426a430e1d4ab1bebf215 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 27 52 2.6E-97 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3724 22115633210426a430e1d4ab1bebf215 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 74 97 2.6E-97 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3724 22115633210426a430e1d4ab1bebf215 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 376 2.6E-97 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3724 22115633210426a430e1d4ab1bebf215 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 301 316 2.6E-97 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3724 22115633210426a430e1d4ab1bebf215 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 436 457 2.6E-97 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3724 22115633210426a430e1d4ab1bebf215 602 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 37 479 3.9E-147 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_0601 e8b0b9f596647f56b94769ed78231d58 215 SUPERFAMILY SSF46894 139 214 1.16E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_0601 e8b0b9f596647f56b94769ed78231d58 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0601 e8b0b9f596647f56b94769ed78231d58 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0601 e8b0b9f596647f56b94769ed78231d58 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0601 e8b0b9f596647f56b94769ed78231d58 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0601 e8b0b9f596647f56b94769ed78231d58 215 SMART SM00448 2 115 1.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0601 e8b0b9f596647f56b94769ed78231d58 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 208 1.2E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0601 e8b0b9f596647f56b94769ed78231d58 215 SMART SM00421 151 208 2.2E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0601 e8b0b9f596647f56b94769ed78231d58 215 SUPERFAMILY SSF52172 2 131 6.83E-30 T 14-10-2018 IPR011006 CheY-like superfamily Amir_0601 e8b0b9f596647f56b94769ed78231d58 215 Pfam PF00072 Response regulator receiver domain 4 116 8.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0601 e8b0b9f596647f56b94769ed78231d58 215 Gene3D G3DSA:3.40.50.12740 2 214 5.8E-63 T 14-10-2018 Amir_1340 42660b5ca9bd1631f322dcd0c95d8612 334 SMART SM00729 71 277 7.7E-19 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amir_1340 42660b5ca9bd1631f322dcd0c95d8612 334 Pfam PF04055 Radical SAM superfamily 80 235 4.1E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_1340 42660b5ca9bd1631f322dcd0c95d8612 334 Gene3D G3DSA:3.20.20.70 75 277 3.9E-20 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_1340 42660b5ca9bd1631f322dcd0c95d8612 334 SUPERFAMILY SSF102114 35 303 3.14E-63 T 14-10-2018 Amir_1340 42660b5ca9bd1631f322dcd0c95d8612 334 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 24 60 1.3E-6 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Amir_1340 42660b5ca9bd1631f322dcd0c95d8612 334 Hamap MF_00206 Lipoyl synthase [lipA]. 1 307 140.572 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Amir_1340 42660b5ca9bd1631f322dcd0c95d8612 334 PIRSF PIRSF005963 5 318 5.8E-122 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Amir_1340 42660b5ca9bd1631f322dcd0c95d8612 334 TIGRFAM TIGR00510 lipA: lipoyl synthase 17 305 5.0E-100 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Amir_0707 ffaf34ec245967141d7533492d05ec71 162 PIRSF PIRSF006092 1 160 4.7E-31 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Amir_0707 ffaf34ec245967141d7533492d05ec71 162 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 158 27.652 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Amir_0707 ffaf34ec245967141d7533492d05ec71 162 Pfam PF03449 Transcription elongation factor, N-terminal 8 76 2.9E-23 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Amir_0707 ffaf34ec245967141d7533492d05ec71 162 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 86 156 2.0E-13 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Amir_0707 ffaf34ec245967141d7533492d05ec71 162 SUPERFAMILY SSF46557 7 78 1.7E-21 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Amir_0707 ffaf34ec245967141d7533492d05ec71 162 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 122 138 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Amir_0707 ffaf34ec245967141d7533492d05ec71 162 Gene3D G3DSA:1.10.287.180 5 76 7.2E-21 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Amir_0707 ffaf34ec245967141d7533492d05ec71 162 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 50 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Amir_0707 ffaf34ec245967141d7533492d05ec71 162 SUPERFAMILY SSF54534 84 156 9.81E-12 T 14-10-2018 Amir_0707 ffaf34ec245967141d7533492d05ec71 162 Gene3D G3DSA:3.10.50.30 84 161 2.4E-11 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Amir_4151 d7ab84fd9f73214ac6dcf6016bfaaf3d 320 Gene3D G3DSA:2.80.10.50 182 319 2.1E-17 T 14-10-2018 Amir_4151 d7ab84fd9f73214ac6dcf6016bfaaf3d 320 Pfam PF00652 Ricin-type beta-trefoil lectin domain 184 316 1.1E-14 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4151 d7ab84fd9f73214ac6dcf6016bfaaf3d 320 SUPERFAMILY SSF50370 183 318 3.22E-19 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_4151 d7ab84fd9f73214ac6dcf6016bfaaf3d 320 Gene3D G3DSA:2.60.40.10 58 181 1.9E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_4151 d7ab84fd9f73214ac6dcf6016bfaaf3d 320 Pfam PF17210 SdrD B-like domain 61 174 3.6E-11 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_4151 d7ab84fd9f73214ac6dcf6016bfaaf3d 320 SMART SM00458 178 319 8.8E-5 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4151 d7ab84fd9f73214ac6dcf6016bfaaf3d 320 SUPERFAMILY SSF117074 57 128 6.02E-11 T 14-10-2018 Amir_2423 d9e5f664ce94267aff5c6e9ccb3830f6 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.5E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2423 d9e5f664ce94267aff5c6e9ccb3830f6 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 5.5E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2423 d9e5f664ce94267aff5c6e9ccb3830f6 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 5.5E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2423 d9e5f664ce94267aff5c6e9ccb3830f6 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.5E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2423 d9e5f664ce94267aff5c6e9ccb3830f6 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 5.5E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2423 d9e5f664ce94267aff5c6e9ccb3830f6 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 5.5E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2423 d9e5f664ce94267aff5c6e9ccb3830f6 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2423 d9e5f664ce94267aff5c6e9ccb3830f6 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 2.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2423 d9e5f664ce94267aff5c6e9ccb3830f6 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2423 d9e5f664ce94267aff5c6e9ccb3830f6 262 Gene3D G3DSA:3.40.50.720 2 260 3.9E-60 T 14-10-2018 Amir_2423 d9e5f664ce94267aff5c6e9ccb3830f6 262 SUPERFAMILY SSF51735 4 257 1.6E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2423 d9e5f664ce94267aff5c6e9ccb3830f6 262 Pfam PF00106 short chain dehydrogenase 8 190 1.6E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3664 827c524e746ca35d869866815de04035 451 SUPERFAMILY SSF51735 192 378 4.44E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3664 827c524e746ca35d869866815de04035 451 Pfam PF00107 Zinc-binding dehydrogenase 233 376 1.0E-28 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_3664 827c524e746ca35d869866815de04035 451 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 222 243 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Amir_3664 827c524e746ca35d869866815de04035 451 SMART SM00829 46 412 4.1E-10 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_3664 827c524e746ca35d869866815de04035 451 TIGRFAM TIGR01751 crot-CoA-red: crotonyl-CoA carboxylase/reductase 32 425 1.7E-166 T 14-10-2018 IPR010085 Crotonyl-CoA reductase GO:0043880 KEGG: 00650+1.3.1.86 Amir_3664 827c524e746ca35d869866815de04035 451 Gene3D G3DSA:3.90.180.10 15 437 5.5E-214 T 14-10-2018 Amir_3664 827c524e746ca35d869866815de04035 451 SUPERFAMILY SSF50129 50 227 4.4E-30 T 14-10-2018 IPR011032 GroES-like superfamily Amir_3664 827c524e746ca35d869866815de04035 451 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 103 187 9.5E-9 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_3664 827c524e746ca35d869866815de04035 451 Gene3D G3DSA:3.40.50.720 216 362 5.5E-214 T 14-10-2018 Amir_5495 bc578aede6b2b699489dba115002c8c7 136 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 28 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Amir_5495 bc578aede6b2b699489dba115002c8c7 136 SUPERFAMILY SSF54593 4 134 2.01E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_5495 bc578aede6b2b699489dba115002c8c7 136 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 130 6.1E-12 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amir_5495 bc578aede6b2b699489dba115002c8c7 136 Gene3D G3DSA:3.10.180.10 2 133 1.4E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_4392 885595138ef55d3d170cc44d8820bd95 180 SUPERFAMILY SSF55797 54 178 4.36E-24 T 14-10-2018 IPR035940 CAP superfamily Amir_4392 885595138ef55d3d170cc44d8820bd95 180 Pfam PF00188 Cysteine-rich secretory protein family 61 177 4.9E-19 T 14-10-2018 IPR014044 CAP domain Amir_4392 885595138ef55d3d170cc44d8820bd95 180 Gene3D G3DSA:3.40.33.10 4 178 2.5E-52 T 14-10-2018 IPR035940 CAP superfamily Amir_1952 e5c4dd18c4ba937e54593e939a0359ab 241 SUPERFAMILY SSF46689 31 89 1.3E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_1952 e5c4dd18c4ba937e54593e939a0359ab 241 Gene3D G3DSA:1.10.357.10 17 241 1.1E-57 T 14-10-2018 Amir_1952 e5c4dd18c4ba937e54593e939a0359ab 241 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 78 1.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1952 e5c4dd18c4ba937e54593e939a0359ab 241 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 93 237 3.1E-11 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 Amir_1952 e5c4dd18c4ba937e54593e939a0359ab 241 SUPERFAMILY SSF48498 100 238 5.34E-21 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_6327 6f0380f1bb4a2d9f35274ba22f60da16 450 SUPERFAMILY SSF53738 7 121 1.77E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6327 6f0380f1bb4a2d9f35274ba22f60da16 450 Gene3D G3DSA:3.40.120.10 249 365 1.5E-34 T 14-10-2018 Amir_6327 6f0380f1bb4a2d9f35274ba22f60da16 450 Gene3D G3DSA:3.30.310.50 367 450 6.8E-21 T 14-10-2018 Amir_6327 6f0380f1bb4a2d9f35274ba22f60da16 450 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 366 2.3E-25 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6327 6f0380f1bb4a2d9f35274ba22f60da16 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 169 188 1.4E-21 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6327 6f0380f1bb4a2d9f35274ba22f60da16 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 1.4E-21 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6327 6f0380f1bb4a2d9f35274ba22f60da16 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 203 216 1.4E-21 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6327 6f0380f1bb4a2d9f35274ba22f60da16 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 1.4E-21 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6327 6f0380f1bb4a2d9f35274ba22f60da16 450 SUPERFAMILY SSF53738 258 362 9.03E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6327 6f0380f1bb4a2d9f35274ba22f60da16 450 Gene3D G3DSA:3.40.120.10 5 143 5.3E-44 T 14-10-2018 Amir_6327 6f0380f1bb4a2d9f35274ba22f60da16 450 SUPERFAMILY SSF53738 151 254 2.71E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6327 6f0380f1bb4a2d9f35274ba22f60da16 450 Gene3D G3DSA:3.40.120.10 171 248 2.2E-32 T 14-10-2018 Amir_6327 6f0380f1bb4a2d9f35274ba22f60da16 450 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 153 252 2.5E-24 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6327 6f0380f1bb4a2d9f35274ba22f60da16 450 SUPERFAMILY SSF55957 366 450 7.72E-18 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6327 6f0380f1bb4a2d9f35274ba22f60da16 450 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 371 448 1.7E-15 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_6327 6f0380f1bb4a2d9f35274ba22f60da16 450 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 8 131 1.3E-30 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amir_4944 e63e353e194e331dd46ddf99b7ce60fa 304 Gene3D G3DSA:3.40.1190.20 4 303 1.3E-53 T 14-10-2018 IPR029056 Ribokinase-like Amir_4944 e63e353e194e331dd46ddf99b7ce60fa 304 Pfam PF00294 pfkB family carbohydrate kinase 21 283 3.7E-34 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Amir_4944 e63e353e194e331dd46ddf99b7ce60fa 304 SUPERFAMILY SSF53613 24 281 1.71E-40 T 14-10-2018 IPR029056 Ribokinase-like Amir_4944 e63e353e194e331dd46ddf99b7ce60fa 304 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 239 252 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Amir_4944 e63e353e194e331dd46ddf99b7ce60fa 304 PIRSF PIRSF000535 10 301 2.9E-42 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Amir_6543 fcb8bf7bee5acb5525a57977ed5a4c3d 541 Gene3D G3DSA:3.30.260.10 135 408 1.2E-211 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Amir_6543 fcb8bf7bee5acb5525a57977ed5a4c3d 541 SUPERFAMILY SSF48592 1 522 3.3E-74 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily Amir_6543 fcb8bf7bee5acb5525a57977ed5a4c3d 541 Gene3D G3DSA:3.50.7.10 190 370 1.2E-211 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily Amir_6543 fcb8bf7bee5acb5525a57977ed5a4c3d 541 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amir_6543 fcb8bf7bee5acb5525a57977ed5a4c3d 541 SUPERFAMILY SSF52029 183 374 9.59E-73 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily Amir_6543 fcb8bf7bee5acb5525a57977ed5a4c3d 541 Hamap MF_00600 60 kDa chaperonin [groL]. 1 539 39.202 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amir_6543 fcb8bf7bee5acb5525a57977ed5a4c3d 541 PRINTS PR00298 60kDa chaperonin signature 26 52 2.2E-68 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amir_6543 fcb8bf7bee5acb5525a57977ed5a4c3d 541 PRINTS PR00298 60kDa chaperonin signature 266 289 2.2E-68 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amir_6543 fcb8bf7bee5acb5525a57977ed5a4c3d 541 PRINTS PR00298 60kDa chaperonin signature 82 109 2.2E-68 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amir_6543 fcb8bf7bee5acb5525a57977ed5a4c3d 541 PRINTS PR00298 60kDa chaperonin signature 396 417 2.2E-68 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amir_6543 fcb8bf7bee5acb5525a57977ed5a4c3d 541 PRINTS PR00298 60kDa chaperonin signature 348 373 2.2E-68 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amir_6543 fcb8bf7bee5acb5525a57977ed5a4c3d 541 Gene3D G3DSA:1.10.560.10 7 519 1.2E-211 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily Amir_6543 fcb8bf7bee5acb5525a57977ed5a4c3d 541 SUPERFAMILY SSF54849 136 203 5.04E-22 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Amir_6543 fcb8bf7bee5acb5525a57977ed5a4c3d 541 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 523 2.3E-86 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Amir_6543 fcb8bf7bee5acb5525a57977ed5a4c3d 541 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 525 2.1E-227 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amir_4909 bbcd1c16815ae74278c62c393417536e 296 Pfam PF01063 Amino-transferase class IV 32 259 1.0E-42 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Amir_4909 bbcd1c16815ae74278c62c393417536e 296 ProSitePatterns PS00770 Aminotransferases class-IV signature. 186 215 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Amir_4909 bbcd1c16815ae74278c62c393417536e 296 Gene3D G3DSA:3.20.10.10 133 284 3.5E-46 T 14-10-2018 Amir_4909 bbcd1c16815ae74278c62c393417536e 296 SUPERFAMILY SSF56752 18 289 5.23E-69 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Amir_4909 bbcd1c16815ae74278c62c393417536e 296 Gene3D G3DSA:3.30.470.10 13 132 3.5E-19 T 14-10-2018 Amir_5199 bb361f8adc49a52bcb000e08b8b628aa 334 Gene3D G3DSA:3.40.50.720 4 327 1.5E-146 T 14-10-2018 Amir_5199 bb361f8adc49a52bcb000e08b8b628aa 334 SUPERFAMILY SSF55347 153 314 8.04E-71 T 14-10-2018 Amir_5199 bb361f8adc49a52bcb000e08b8b628aa 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 313 5.1E-68 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5199 bb361f8adc49a52bcb000e08b8b628aa 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5199 bb361f8adc49a52bcb000e08b8b628aa 334 SUPERFAMILY SSF51735 3 169 1.68E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5199 bb361f8adc49a52bcb000e08b8b628aa 334 Gene3D G3DSA:3.30.360.10 152 315 1.5E-146 T 14-10-2018 Amir_5199 bb361f8adc49a52bcb000e08b8b628aa 334 SMART SM00846 3 153 1.4E-84 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5199 bb361f8adc49a52bcb000e08b8b628aa 334 PIRSF PIRSF000149 1 334 1.0E-130 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5199 bb361f8adc49a52bcb000e08b8b628aa 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 103 6.1E-36 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5199 bb361f8adc49a52bcb000e08b8b628aa 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 1.5E-35 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5199 bb361f8adc49a52bcb000e08b8b628aa 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 1.5E-35 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5199 bb361f8adc49a52bcb000e08b8b628aa 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 1.5E-35 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5199 bb361f8adc49a52bcb000e08b8b628aa 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 1.5E-35 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5199 bb361f8adc49a52bcb000e08b8b628aa 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 1.5E-35 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5199 bb361f8adc49a52bcb000e08b8b628aa 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 1.7E-130 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_3849 40264e4f2bcfb86f8bc92336dd12b666 1084 SUPERFAMILY SSF48208 304 760 9.86E-22 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_3849 40264e4f2bcfb86f8bc92336dd12b666 1084 Pfam PF07971 Glycosyl hydrolase family 92 281 778 1.6E-153 T 14-10-2018 IPR012939 Glycosyl hydrolase family 92 Amir_3849 40264e4f2bcfb86f8bc92336dd12b666 1084 Gene3D G3DSA:3.30.2080.10 336 781 7.4E-233 T 14-10-2018 Amir_3849 40264e4f2bcfb86f8bc92336dd12b666 1084 Gene3D G3DSA:1.20.1050.60 391 496 7.4E-233 T 14-10-2018 Amir_3849 40264e4f2bcfb86f8bc92336dd12b666 1084 Gene3D G3DSA:2.70.98.10 38 390 7.4E-233 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Amir_3849 40264e4f2bcfb86f8bc92336dd12b666 1084 Gene3D G3DSA:1.20.1610.10 497 654 7.4E-233 T 14-10-2018 Amir_3849 40264e4f2bcfb86f8bc92336dd12b666 1084 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 20 781 2.2E-148 T 14-10-2018 IPR005887 Alpha-1,2-mannosidase, putative Amir_6515 f81a283fd693c27804d9986e3033f29b 354 Gene3D G3DSA:3.40.800.20 1 346 3.8E-86 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Amir_6515 f81a283fd693c27804d9986e3033f29b 354 Pfam PF00850 Histone deacetylase domain 32 313 2.5E-60 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Amir_6515 f81a283fd693c27804d9986e3033f29b 354 PRINTS PR01270 Histone deacetylase superfamily signature 166 181 4.4E-12 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Amir_6515 f81a283fd693c27804d9986e3033f29b 354 PRINTS PR01270 Histone deacetylase superfamily signature 134 157 4.4E-12 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Amir_6515 f81a283fd693c27804d9986e3033f29b 354 PRINTS PR01270 Histone deacetylase superfamily signature 250 260 4.4E-12 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Amir_6515 f81a283fd693c27804d9986e3033f29b 354 SUPERFAMILY SSF52768 2 320 1.2E-80 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily Amir_0794 220dfc9fa2292fe24d033f2325a1a986 406 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 98 106 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Amir_0794 220dfc9fa2292fe24d033f2325a1a986 406 Gene3D G3DSA:2.160.10.10 292 405 2.0E-32 T 14-10-2018 Amir_0794 220dfc9fa2292fe24d033f2325a1a986 406 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 13 32 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Amir_0794 220dfc9fa2292fe24d033f2325a1a986 406 Gene3D G3DSA:3.90.550.10 2 291 1.4E-82 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0794 220dfc9fa2292fe24d033f2325a1a986 406 Pfam PF00483 Nucleotidyl transferase 9 276 7.7E-69 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Amir_0794 220dfc9fa2292fe24d033f2325a1a986 406 SUPERFAMILY SSF51161 299 396 2.08E-17 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Amir_0794 220dfc9fa2292fe24d033f2325a1a986 406 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 196 206 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Amir_0794 220dfc9fa2292fe24d033f2325a1a986 406 SUPERFAMILY SSF53448 7 358 1.6E-69 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0794 220dfc9fa2292fe24d033f2325a1a986 406 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 7 377 8.5E-138 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Amir_0794 220dfc9fa2292fe24d033f2325a1a986 406 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 4 403 47.008 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Amir_3091 0db6b1e80fd28e6940abd4d4bfa48534 309 SUPERFAMILY SSF103481 46 148 1.7E-11 T 14-10-2018 Amir_3091 0db6b1e80fd28e6940abd4d4bfa48534 309 Pfam PF00892 EamA-like transporter family 159 293 6.5E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amir_3091 0db6b1e80fd28e6940abd4d4bfa48534 309 Pfam PF00892 EamA-like transporter family 17 146 2.3E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amir_3091 0db6b1e80fd28e6940abd4d4bfa48534 309 SUPERFAMILY SSF103481 199 296 3.14E-13 T 14-10-2018 Amir_0479 9519f1b4d3e99eb482704714cc6c2e84 218 Gene3D G3DSA:1.10.150.240 16 80 4.5E-26 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Amir_0479 9519f1b4d3e99eb482704714cc6c2e84 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 165 1.4E-9 T 14-10-2018 Amir_0479 9519f1b4d3e99eb482704714cc6c2e84 218 Gene3D G3DSA:3.40.50.1000 7 188 4.5E-26 T 14-10-2018 IPR023214 HAD superfamily Amir_0479 9519f1b4d3e99eb482704714cc6c2e84 218 SUPERFAMILY SSF56784 5 199 1.62E-33 T 14-10-2018 IPR036412 HAD-like superfamily Amir_6770 7686df3128251a5030d3043aed1764eb 182 Pfam PF01965 DJ-1/PfpI family 6 178 1.8E-46 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Amir_6770 7686df3128251a5030d3043aed1764eb 182 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 8 180 1.3E-48 T 14-10-2018 IPR006286 Deglycase PfpI Amir_6770 7686df3128251a5030d3043aed1764eb 182 Gene3D G3DSA:3.40.50.880 1 181 1.2E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_6770 7686df3128251a5030d3043aed1764eb 182 SUPERFAMILY SSF52317 6 181 6.12E-43 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_1341 aa281fee79853982eddea8ea11909db6 307 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 2.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1341 aa281fee79853982eddea8ea11909db6 307 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 193 2.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1341 aa281fee79853982eddea8ea11909db6 307 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 2.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1341 aa281fee79853982eddea8ea11909db6 307 Pfam PF00106 short chain dehydrogenase 16 217 4.6E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1341 aa281fee79853982eddea8ea11909db6 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 4.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1341 aa281fee79853982eddea8ea11909db6 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 193 4.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1341 aa281fee79853982eddea8ea11909db6 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 214 4.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1341 aa281fee79853982eddea8ea11909db6 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 4.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1341 aa281fee79853982eddea8ea11909db6 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 4.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1341 aa281fee79853982eddea8ea11909db6 307 Gene3D G3DSA:3.40.50.720 1 303 9.5E-83 T 14-10-2018 Amir_1341 aa281fee79853982eddea8ea11909db6 307 SUPERFAMILY SSF51735 13 264 1.23E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3505 0f6435357c8b721bf58fc3148cf6c17c 173 Pfam PF08719 Domain of unknown function (DUF1768) 12 169 1.0E-47 T 14-10-2018 IPR012816 NADAR Amir_3505 0f6435357c8b721bf58fc3148cf6c17c 173 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 10 169 4.6E-46 T 14-10-2018 IPR012816 NADAR Amir_3505 0f6435357c8b721bf58fc3148cf6c17c 173 Gene3D G3DSA:1.10.357.40 12 173 3.4E-39 T 14-10-2018 IPR037238 YbiA-like superfamily Amir_3505 0f6435357c8b721bf58fc3148cf6c17c 173 SUPERFAMILY SSF143990 9 171 3.79E-44 T 14-10-2018 IPR037238 YbiA-like superfamily Amir_4381 466fe3b19e8638aa14232c17d96e2c4f 417 Gene3D G3DSA:3.30.9.50 43 266 1.9E-53 T 14-10-2018 Amir_4381 466fe3b19e8638aa14232c17d96e2c4f 417 Gene3D G3DSA:3.50.50.60 2 335 1.9E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4381 466fe3b19e8638aa14232c17d96e2c4f 417 SUPERFAMILY SSF51905 1 368 5.34E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4381 466fe3b19e8638aa14232c17d96e2c4f 417 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 306 4.9E-17 T 14-10-2018 Amir_4381 466fe3b19e8638aa14232c17d96e2c4f 417 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 4.9E-17 T 14-10-2018 Amir_4381 466fe3b19e8638aa14232c17d96e2c4f 417 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 275 290 4.9E-17 T 14-10-2018 Amir_4381 466fe3b19e8638aa14232c17d96e2c4f 417 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 4.9E-17 T 14-10-2018 Amir_4381 466fe3b19e8638aa14232c17d96e2c4f 417 Pfam PF01494 FAD binding domain 1 320 1.1E-30 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_2491 c0d842ca6dd9e7c543f666012cf781f5 367 Gene3D G3DSA:1.10.630.10 16 367 7.6E-59 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2491 c0d842ca6dd9e7c543f666012cf781f5 367 SUPERFAMILY SSF48264 21 367 1.26E-47 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2491 c0d842ca6dd9e7c543f666012cf781f5 367 PRINTS PR00359 B-class P450 signature 77 88 1.7E-26 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2491 c0d842ca6dd9e7c543f666012cf781f5 367 PRINTS PR00359 B-class P450 signature 272 299 1.7E-26 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2491 c0d842ca6dd9e7c543f666012cf781f5 367 PRINTS PR00359 B-class P450 signature 253 264 1.7E-26 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2491 c0d842ca6dd9e7c543f666012cf781f5 367 PRINTS PR00359 B-class P450 signature 143 158 1.7E-26 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2491 c0d842ca6dd9e7c543f666012cf781f5 367 PRINTS PR00359 B-class P450 signature 126 142 1.7E-26 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2491 c0d842ca6dd9e7c543f666012cf781f5 367 PRINTS PR00359 B-class P450 signature 176 198 1.7E-26 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3226 83b48b4b12d5cce8e6e902704466560f 345 SUPERFAMILY SSF51430 8 317 9.95E-96 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3226 83b48b4b12d5cce8e6e902704466560f 345 Gene3D G3DSA:3.20.20.100 7 338 8.0E-115 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3226 83b48b4b12d5cce8e6e902704466560f 345 Pfam PF00248 Aldo/keto reductase family 20 316 1.0E-73 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_0647 b14dc5e471d5cb2ea972b0be8e2c8aa0 227 SUPERFAMILY SSF161098 13 206 4.97E-40 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0647 b14dc5e471d5cb2ea972b0be8e2c8aa0 227 Gene3D G3DSA:1.10.3720.10 8 222 9.0E-43 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0647 b14dc5e471d5cb2ea972b0be8e2c8aa0 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 223 1.4E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_2744 3455a3732dda3773b2371a212413e169 619 SUPERFAMILY SSF51905 78 430 8.58E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1311 e1d2a450b298df9f363a8c61028cf7fe 748 Pfam PF13245 AAA domain 192 566 2.3E-12 T 14-10-2018 Amir_1311 e1d2a450b298df9f363a8c61028cf7fe 748 Gene3D G3DSA:3.40.50.300 445 594 2.6E-8 T 14-10-2018 Amir_1311 e1d2a450b298df9f363a8c61028cf7fe 748 Gene3D G3DSA:3.40.50.300 595 747 2.9E-12 T 14-10-2018 Amir_1311 e1d2a450b298df9f363a8c61028cf7fe 748 Gene3D G3DSA:3.40.50.300 181 399 9.0E-10 T 14-10-2018 Amir_1311 e1d2a450b298df9f363a8c61028cf7fe 748 SUPERFAMILY SSF52540 180 736 3.68E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6303 ff9d9685e281f7cfa212cb1960fb2c69 133 Gene3D G3DSA:3.40.50.1000 4 130 4.1E-29 T 14-10-2018 IPR023214 HAD superfamily Amir_6303 ff9d9685e281f7cfa212cb1960fb2c69 133 SUPERFAMILY SSF56784 7 123 3.24E-24 T 14-10-2018 IPR036412 HAD-like superfamily Amir_6303 ff9d9685e281f7cfa212cb1960fb2c69 133 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 37 112 6.3E-15 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_6303 ff9d9685e281f7cfa212cb1960fb2c69 133 Pfam PF00702 haloacid dehalogenase-like hydrolase 26 107 1.2E-8 T 14-10-2018 Amir_3942 4a08d591ffbf9930bdc4f93788e75203 197 SMART SM00530 16 71 7.4E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_3942 4a08d591ffbf9930bdc4f93788e75203 197 SUPERFAMILY SSF47413 10 77 4.83E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3942 4a08d591ffbf9930bdc4f93788e75203 197 Gene3D G3DSA:1.10.260.40 8 76 1.7E-17 T 14-10-2018 Amir_3942 4a08d591ffbf9930bdc4f93788e75203 197 Pfam PF01381 Helix-turn-helix 17 69 1.4E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_2430 4008987042d3baf3ae6062aa05559c98 276 SUPERFAMILY SSF47413 10 60 2.43E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2430 4008987042d3baf3ae6062aa05559c98 276 SMART SM00530 14 69 3.9E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_2430 4008987042d3baf3ae6062aa05559c98 276 Pfam PF13560 Helix-turn-helix domain 11 56 6.7E-13 T 14-10-2018 Amir_2430 4008987042d3baf3ae6062aa05559c98 276 Gene3D G3DSA:1.10.260.40 2 77 1.5E-11 T 14-10-2018 Amir_3065 da16afb6fb9c08cbf9c8fd5659cc5a25 262 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 17 192 2.1E-21 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_3065 da16afb6fb9c08cbf9c8fd5659cc5a25 262 Gene3D G3DSA:3.40.50.1110 13 205 4.1E-23 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_3065 da16afb6fb9c08cbf9c8fd5659cc5a25 262 SUPERFAMILY SSF52266 13 201 7.79E-33 T 14-10-2018 Amir_1186 b96a651ccd31a30f46e33b63ebe24552 974 SMART SM00316 347 426 3.9E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 Amir_1186 b96a651ccd31a30f46e33b63ebe24552 974 SUPERFAMILY SSF50249 349 432 3.6E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_1186 b96a651ccd31a30f46e33b63ebe24552 974 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 27 76 2.1E-10 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Amir_1186 b96a651ccd31a30f46e33b63ebe24552 974 Pfam PF10150 Ribonuclease E/G family 428 699 3.2E-104 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Amir_1186 b96a651ccd31a30f46e33b63ebe24552 974 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 324 728 4.0E-152 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Amir_1186 b96a651ccd31a30f46e33b63ebe24552 974 Gene3D G3DSA:1.10.10.2480 28 81 2.6E-7 T 14-10-2018 Amir_1186 b96a651ccd31a30f46e33b63ebe24552 974 Gene3D G3DSA:2.40.50.140 342 432 5.9E-28 T 14-10-2018 Amir_6406 7c3cbb68ca4869853139f06ce50a7888 393 SUPERFAMILY SSF55874 280 387 4.97E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6406 7c3cbb68ca4869853139f06ce50a7888 393 Gene3D G3DSA:3.30.565.10 266 388 4.8E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6406 7c3cbb68ca4869853139f06ce50a7888 393 Pfam PF07730 Histidine kinase 194 259 4.3E-17 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_4508 dbc1a4e3b18f931bbad76356f1e418be 693 Pfam PF13245 AAA domain 177 528 1.6E-13 T 14-10-2018 Amir_4508 dbc1a4e3b18f931bbad76356f1e418be 693 Pfam PF13538 UvrD-like helicase C-terminal domain 645 687 3.0E-7 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain Amir_4508 dbc1a4e3b18f931bbad76356f1e418be 693 Gene3D G3DSA:3.40.50.300 461 564 1.2E-7 T 14-10-2018 Amir_4508 dbc1a4e3b18f931bbad76356f1e418be 693 SUPERFAMILY SSF52540 166 687 7.96E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2931 833c93ee4cf4a2b3fc0107857af87a2a 1029 SUPERFAMILY SSF82171 248 621 3.53E-23 T 14-10-2018 Amir_2931 833c93ee4cf4a2b3fc0107857af87a2a 1029 Pfam PF07676 WD40-like Beta Propeller Repeat 480 500 9.1E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_2931 833c93ee4cf4a2b3fc0107857af87a2a 1029 Pfam PF07676 WD40-like Beta Propeller Repeat 428 449 0.014 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_2931 833c93ee4cf4a2b3fc0107857af87a2a 1029 Pfam PF07676 WD40-like Beta Propeller Repeat 156 184 5.0E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_2931 833c93ee4cf4a2b3fc0107857af87a2a 1029 Pfam PF07676 WD40-like Beta Propeller Repeat 380 405 0.019 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_2931 833c93ee4cf4a2b3fc0107857af87a2a 1029 SUPERFAMILY SSF82171 102 288 7.26E-15 T 14-10-2018 Amir_2931 833c93ee4cf4a2b3fc0107857af87a2a 1029 Gene3D G3DSA:2.120.10.30 380 663 4.9E-24 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_2931 833c93ee4cf4a2b3fc0107857af87a2a 1029 Gene3D G3DSA:2.120.10.30 40 225 2.9E-21 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_5274 d7bd61205c77a357c4e0d09d72f3ea73 827 Pfam PF00271 Helicase conserved C-terminal domain 284 363 5.5E-6 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_5274 d7bd61205c77a357c4e0d09d72f3ea73 827 SMART SM00487 27 212 9.3E-19 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_5274 d7bd61205c77a357c4e0d09d72f3ea73 827 SMART SM00490 277 363 2.3E-13 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_5274 d7bd61205c77a357c4e0d09d72f3ea73 827 Gene3D G3DSA:3.40.50.300 18 203 3.6E-38 T 14-10-2018 Amir_5274 d7bd61205c77a357c4e0d09d72f3ea73 827 SUPERFAMILY SSF52540 44 375 9.34E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5274 d7bd61205c77a357c4e0d09d72f3ea73 827 Gene3D G3DSA:3.40.50.300 204 381 8.7E-40 T 14-10-2018 Amir_5274 d7bd61205c77a357c4e0d09d72f3ea73 827 Pfam PF12029 Domain of unknown function (DUF3516) 374 821 7.5E-212 T 14-10-2018 IPR021904 Protein of unknown function DUF3516 Amir_5274 d7bd61205c77a357c4e0d09d72f3ea73 827 Pfam PF00270 DEAD/DEAH box helicase 33 178 2.1E-12 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amir_4227 720e11aba87dd86f16d581b20399622e 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 1.8E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_4227 720e11aba87dd86f16d581b20399622e 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 1.8E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_4227 720e11aba87dd86f16d581b20399622e 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 1.8E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_4227 720e11aba87dd86f16d581b20399622e 111 SUPERFAMILY SSF46785 7 87 2.13E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4227 720e11aba87dd86f16d581b20399622e 111 Gene3D G3DSA:1.10.10.10 4 101 8.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4227 720e11aba87dd86f16d581b20399622e 111 Pfam PF12840 Helix-turn-helix domain 11 68 2.5E-9 T 14-10-2018 Amir_4227 720e11aba87dd86f16d581b20399622e 111 SMART SM00418 11 89 1.9E-21 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_2535 39e02a057ad34c31457c9a13557dcb10 423 SUPERFAMILY SSF48264 45 422 6.29E-83 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2535 39e02a057ad34c31457c9a13557dcb10 423 PRINTS PR00359 B-class P450 signature 300 311 5.1E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2535 39e02a057ad34c31457c9a13557dcb10 423 PRINTS PR00359 B-class P450 signature 167 183 5.1E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2535 39e02a057ad34c31457c9a13557dcb10 423 PRINTS PR00359 B-class P450 signature 184 199 5.1E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2535 39e02a057ad34c31457c9a13557dcb10 423 PRINTS PR00359 B-class P450 signature 120 131 5.1E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2535 39e02a057ad34c31457c9a13557dcb10 423 PRINTS PR00359 B-class P450 signature 318 345 5.1E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2535 39e02a057ad34c31457c9a13557dcb10 423 PRINTS PR00359 B-class P450 signature 373 384 5.1E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2535 39e02a057ad34c31457c9a13557dcb10 423 PRINTS PR00359 B-class P450 signature 221 243 5.1E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2535 39e02a057ad34c31457c9a13557dcb10 423 Gene3D G3DSA:1.10.630.10 46 423 1.5E-100 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2535 39e02a057ad34c31457c9a13557dcb10 423 PRINTS PR00385 P450 superfamily signature 300 311 2.8E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2535 39e02a057ad34c31457c9a13557dcb10 423 PRINTS PR00385 P450 superfamily signature 373 384 2.8E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2535 39e02a057ad34c31457c9a13557dcb10 423 PRINTS PR00385 P450 superfamily signature 265 282 2.8E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2535 39e02a057ad34c31457c9a13557dcb10 423 PRINTS PR00385 P450 superfamily signature 364 373 2.8E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2535 39e02a057ad34c31457c9a13557dcb10 423 Pfam PF00067 Cytochrome P450 245 394 2.9E-17 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2535 39e02a057ad34c31457c9a13557dcb10 423 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 366 375 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_3213 968981ab8875c0580984ffc06a55cfd7 464 SUPERFAMILY SSF75005 37 320 7.14E-67 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3213 968981ab8875c0580984ffc06a55cfd7 464 SMART SM00606 335 464 7.6E-40 T 14-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 Amir_3213 968981ab8875c0580984ffc06a55cfd7 464 SUPERFAMILY SSF49785 334 463 1.16E-32 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_3213 968981ab8875c0580984ffc06a55cfd7 464 Gene3D G3DSA:2.60.120.260 336 463 1.9E-41 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_3213 968981ab8875c0580984ffc06a55cfd7 464 Pfam PF04616 Glycosyl hydrolases family 43 39 320 6.9E-50 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Amir_3213 968981ab8875c0580984ffc06a55cfd7 464 Gene3D G3DSA:2.115.10.20 36 329 2.0E-85 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3213 968981ab8875c0580984ffc06a55cfd7 464 Pfam PF03422 Carbohydrate binding module (family 6) 343 463 2.1E-34 T 14-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 Amir_2566 c6ba31279548bf9391638e04ea443a1d 220 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 19 125 2.0E-33 T 14-10-2018 IPR013559 YheO-like Amir_2566 c6ba31279548bf9391638e04ea443a1d 220 Pfam PF13309 HTH domain 145 205 2.0E-14 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain Amir_2566 c6ba31279548bf9391638e04ea443a1d 220 Pfam PF08348 YheO-like PAS domain 15 121 5.2E-31 T 14-10-2018 IPR013559 YheO-like Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 Pfam PF00486 Transcriptional regulatory protein, C terminal 46 119 1.5E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 Gene3D G3DSA:3.40.50.300 295 461 5.6E-26 T 14-10-2018 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 SMART SM01043 126 270 2.1E-50 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 PRINTS PR00364 Disease resistance protein signature 330 345 9.3E-8 T 14-10-2018 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 PRINTS PR00364 Disease resistance protein signature 409 423 9.3E-8 T 14-10-2018 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 PRINTS PR00364 Disease resistance protein signature 491 505 9.3E-8 T 14-10-2018 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 Pfam PF13424 Tetratricopeptide repeat 787 859 1.1E-11 T 14-10-2018 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 SMART SM00862 39 119 1.3E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 Gene3D G3DSA:1.10.10.10 17 122 5.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 SUPERFAMILY SSF48452 121 294 6.98E-36 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 SUPERFAMILY SSF48452 764 937 7.36E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 Pfam PF00931 NB-ARC domain 318 505 2.0E-8 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 SUPERFAMILY SSF46894 29 119 1.39E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 SUPERFAMILY SSF52540 304 551 9.84E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 SMART SM00028 907 939 310.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 SMART SM00028 867 900 380.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 SMART SM00028 747 780 2.5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 SMART SM00028 787 820 5.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 SMART SM00028 827 860 0.46 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 Gene3D G3DSA:1.25.40.10 685 956 3.8E-38 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 Gene3D G3DSA:1.25.40.10 124 291 1.8E-49 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5677 f8c0dc0ec9f1062b6c4ef8578e6760bb 965 Pfam PF03704 Bacterial transcriptional activator domain 126 270 1.4E-43 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_0331 ad8b8df60be3624fdd0be41d62b3a4a5 334 SUPERFAMILY SSF81345 4 329 1.96E-83 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_0331 ad8b8df60be3624fdd0be41d62b3a4a5 334 Gene3D G3DSA:1.10.3470.10 6 332 1.1E-99 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_0331 ad8b8df60be3624fdd0be41d62b3a4a5 334 Pfam PF01032 FecCD transport family 20 328 4.1E-94 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_4715 337ec4619a99141241e929ab48e718c0 326 SMART SM00382 43 235 6.6E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4715 337ec4619a99141241e929ab48e718c0 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 284 2.9E-9 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_4715 337ec4619a99141241e929ab48e718c0 326 Pfam PF00005 ABC transporter 35 185 3.8E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4715 337ec4619a99141241e929ab48e718c0 326 SUPERFAMILY SSF52540 9 257 1.49E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4715 337ec4619a99141241e929ab48e718c0 326 Gene3D G3DSA:3.40.50.300 6 306 6.4E-82 T 14-10-2018 Amir_4715 337ec4619a99141241e929ab48e718c0 326 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_1250 047034d573122c187db10948ceab5c87 187 Pfam PF02130 Uncharacterized protein family UPF0054 17 146 1.1E-34 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Amir_1250 047034d573122c187db10948ceab5c87 187 SUPERFAMILY SSF55486 6 147 2.69E-37 T 14-10-2018 Amir_1250 047034d573122c187db10948ceab5c87 187 Gene3D G3DSA:3.40.390.30 2 149 1.1E-35 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 Amir_1250 047034d573122c187db10948ceab5c87 187 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 36 148 4.4E-30 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Amir_1250 047034d573122c187db10948ceab5c87 187 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 118 128 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site Amir_1250 047034d573122c187db10948ceab5c87 187 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 176 20.306 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Amir_4721 59489bb68ac95dbf902fd476bb288d53 457 SUPERFAMILY SSF53720 7 449 2.09E-76 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_4721 59489bb68ac95dbf902fd476bb288d53 457 Gene3D G3DSA:3.40.309.10 226 406 7.7E-171 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_4721 59489bb68ac95dbf902fd476bb288d53 457 Gene3D G3DSA:3.40.605.10 8 457 7.7E-171 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_4721 59489bb68ac95dbf902fd476bb288d53 457 Pfam PF00171 Aldehyde dehydrogenase family 7 270 1.1E-30 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_6420 cecabe1ced1248127aca8f3437e95815 605 SMART SM00220 11 269 1.8E-59 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_6420 cecabe1ced1248127aca8f3437e95815 605 Gene3D G3DSA:3.30.200.20 2 94 9.2E-28 T 14-10-2018 Amir_6420 cecabe1ced1248127aca8f3437e95815 605 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 134 146 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_6420 cecabe1ced1248127aca8f3437e95815 605 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 17 40 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_6420 cecabe1ced1248127aca8f3437e95815 605 SUPERFAMILY SSF56112 5 267 1.25E-68 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_6420 cecabe1ced1248127aca8f3437e95815 605 Gene3D G3DSA:1.10.510.10 97 273 9.2E-43 T 14-10-2018 Amir_6420 cecabe1ced1248127aca8f3437e95815 605 Pfam PF00069 Protein kinase domain 11 260 8.3E-47 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_6283 66983b6d48cdc411d77d5e47da021928 367 Pfam PF12102 Domain of unknown function (DUF3578) 11 199 8.6E-46 T 14-10-2018 IPR021961 Protein of unknown function DUF3578 Amir_6283 66983b6d48cdc411d77d5e47da021928 367 Pfam PF13020 Domain of unknown function (DUF3883) 247 319 8.4E-7 T 14-10-2018 IPR024975 Domain of unknown function DUF3883 Amir_6283 66983b6d48cdc411d77d5e47da021928 367 Gene3D G3DSA:3.30.920.90 41 119 8.9E-6 T 14-10-2018 Amir_6111 6830bd1045ec1db5c486a5b61c1e2131 187 Pfam PF12079 Protein of unknown function (DUF3558) 15 184 9.7E-15 T 14-10-2018 IPR024520 Protein of unknown function DUF3558 Amir_4178 97a453de13df03b06761d25d76a4e738 314 SMART SM00829 10 312 2.4E-11 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_4178 97a453de13df03b06761d25d76a4e738 314 SUPERFAMILY SSF50129 1 162 4.41E-27 T 14-10-2018 IPR011032 GroES-like superfamily Amir_4178 97a453de13df03b06761d25d76a4e738 314 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 103 6.7E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_4178 97a453de13df03b06761d25d76a4e738 314 SUPERFAMILY SSF51735 129 311 1.01E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4178 97a453de13df03b06761d25d76a4e738 314 Gene3D G3DSA:3.40.50.720 136 283 1.2E-62 T 14-10-2018 Amir_4178 97a453de13df03b06761d25d76a4e738 314 Gene3D G3DSA:3.90.180.10 8 312 1.2E-62 T 14-10-2018 Amir_4178 97a453de13df03b06761d25d76a4e738 314 Pfam PF13602 Zinc-binding dehydrogenase 211 312 4.9E-14 T 14-10-2018 Amir_2037 c7adff82b964362c729198a86612838e 233 Pfam PF02665 Nitrate reductase gamma subunit 2 222 8.1E-86 T 14-10-2018 IPR023234 NarG-like domain Amir_2037 c7adff82b964362c729198a86612838e 233 Gene3D G3DSA:1.20.950.20 1 214 3.6E-77 T 14-10-2018 Amir_2037 c7adff82b964362c729198a86612838e 233 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 2 223 3.9E-61 T 14-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 Amir_2037 c7adff82b964362c729198a86612838e 233 SUPERFAMILY SSF103501 2 222 1.83E-65 T 14-10-2018 IPR036197 NarG-like superfamily Amir_1550 a7f407378412bb62a684a68478934499 388 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 13 384 8.3E-112 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 Amir_1550 a7f407378412bb62a684a68478934499 388 Gene3D G3DSA:3.20.20.140 6 388 2.0E-147 T 14-10-2018 Amir_1550 a7f407378412bb62a684a68478934499 388 SUPERFAMILY SSF51556 9 386 3.17E-100 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_2530 f0d45a9ccf35d54060b6af98d3eeb295 521 Pfam PF13365 Trypsin-like peptidase domain 28 169 1.3E-9 T 14-10-2018 Amir_2530 f0d45a9ccf35d54060b6af98d3eeb295 521 Gene3D G3DSA:2.40.10.120 18 196 1.7E-9 T 14-10-2018 Amir_2530 f0d45a9ccf35d54060b6af98d3eeb295 521 SUPERFAMILY SSF50494 14 189 1.22E-14 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_2992 fe6f824a7a4387039894021672e5ee70 188 SMART SM00530 15 70 6.2E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_2992 fe6f824a7a4387039894021672e5ee70 188 Gene3D G3DSA:1.10.260.40 4 69 1.2E-17 T 14-10-2018 Amir_2992 fe6f824a7a4387039894021672e5ee70 188 Pfam PF01381 Helix-turn-helix 16 70 1.9E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_2992 fe6f824a7a4387039894021672e5ee70 188 SUPERFAMILY SSF51182 22 178 1.38E-15 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_2992 fe6f824a7a4387039894021672e5ee70 188 Pfam PF07883 Cupin domain 117 172 4.3E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Amir_2992 fe6f824a7a4387039894021672e5ee70 188 Gene3D G3DSA:2.60.120.10 70 182 1.0E-10 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_2992 fe6f824a7a4387039894021672e5ee70 188 SUPERFAMILY SSF47413 11 74 1.86E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2233 f55646f8cb32b40e87ee04faf8b0fb3f 357 Gene3D G3DSA:3.30.565.10 238 356 2.9E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2233 f55646f8cb32b40e87ee04faf8b0fb3f 357 Pfam PF07730 Histidine kinase 161 226 5.6E-19 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_2233 f55646f8cb32b40e87ee04faf8b0fb3f 357 SUPERFAMILY SSF55874 256 356 7.17E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2201 c5ccfb243b5440267630f2bcd8dc45a1 412 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 244 265 2.2E-23 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Amir_2201 c5ccfb243b5440267630f2bcd8dc45a1 412 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 213 231 2.2E-23 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Amir_2201 c5ccfb243b5440267630f2bcd8dc45a1 412 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 40 51 2.2E-23 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Amir_2201 c5ccfb243b5440267630f2bcd8dc45a1 412 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 76 85 2.2E-23 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Amir_2201 c5ccfb243b5440267630f2bcd8dc45a1 412 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 38 336 4.6E-81 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Amir_2201 c5ccfb243b5440267630f2bcd8dc45a1 412 TIGRFAM TIGR03447 mycothiol_MshC: cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase 2 412 2.1E-209 T 14-10-2018 IPR017812 Mycothiol ligase MshC GO:0010125|GO:0035446 Amir_2201 c5ccfb243b5440267630f2bcd8dc45a1 412 Gene3D G3DSA:1.20.120.640 330 412 4.8E-27 T 14-10-2018 Amir_2201 c5ccfb243b5440267630f2bcd8dc45a1 412 SUPERFAMILY SSF52374 27 335 2.65E-68 T 14-10-2018 Amir_2201 c5ccfb243b5440267630f2bcd8dc45a1 412 Gene3D G3DSA:3.40.50.620 1 328 1.4E-100 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_2201 c5ccfb243b5440267630f2bcd8dc45a1 412 Hamap MF_01697 L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [mshC]. 9 412 53.384 T 14-10-2018 IPR017812 Mycothiol ligase MshC GO:0010125|GO:0035446 Amir_6763 7627da6c7f061776f88773528ff7deb1 251 Gene3D G3DSA:3.40.50.150 12 200 2.1E-5 T 14-10-2018 Amir_6763 7627da6c7f061776f88773528ff7deb1 251 SUPERFAMILY SSF53335 17 139 1.88E-6 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_1433 63a7bb8067babe558788fd40b7a53218 165 Gene3D G3DSA:3.10.350.10 95 162 2.2E-5 T 14-10-2018 IPR036779 LysM domain superfamily Amir_1433 63a7bb8067babe558788fd40b7a53218 165 Pfam PF01476 LysM domain 110 159 5.3E-5 T 14-10-2018 IPR018392 LysM domain Amir_1837 1af5673f585e270a7c30c025f3b516c9 290 Gene3D G3DSA:1.10.260.40 59 138 2.5E-6 T 14-10-2018 Amir_1837 1af5673f585e270a7c30c025f3b516c9 290 SMART SM00530 74 129 9.5E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_1837 1af5673f585e270a7c30c025f3b516c9 290 Pfam PF13560 Helix-turn-helix domain 70 128 1.7E-11 T 14-10-2018 Amir_1837 1af5673f585e270a7c30c025f3b516c9 290 SUPERFAMILY SSF47413 66 128 1.38E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_6379 710fe48ff5c7ffa8f12f04573362465d 280 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 95 108 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Amir_6379 710fe48ff5c7ffa8f12f04573362465d 280 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 22 275 1.2E-87 T 14-10-2018 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15 Amir_6379 710fe48ff5c7ffa8f12f04573362465d 280 Gene3D G3DSA:3.40.190.80 164 275 7.4E-21 T 14-10-2018 Amir_6379 710fe48ff5c7ffa8f12f04573362465d 280 SUPERFAMILY SSF56655 17 277 7.07E-70 T 14-10-2018 Amir_6379 710fe48ff5c7ffa8f12f04573362465d 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 76 92 5.6E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_6379 710fe48ff5c7ffa8f12f04573362465d 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 54 74 5.6E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_6379 710fe48ff5c7ffa8f12f04573362465d 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 227 251 5.6E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_6379 710fe48ff5c7ffa8f12f04573362465d 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 95 111 5.6E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_6379 710fe48ff5c7ffa8f12f04573362465d 280 Gene3D G3DSA:3.30.540.10 6 152 8.9E-42 T 14-10-2018 Amir_6379 710fe48ff5c7ffa8f12f04573362465d 280 Pfam PF00459 Inositol monophosphatase family 22 253 4.7E-46 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_4102 4754026112e98c6a179fa9ecc060bc51 452 SUPERFAMILY SSF48264 5 450 3.01E-109 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4102 4754026112e98c6a179fa9ecc060bc51 452 PRINTS PR00385 P450 superfamily signature 315 326 5.2E-14 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4102 4754026112e98c6a179fa9ecc060bc51 452 PRINTS PR00385 P450 superfamily signature 390 399 5.2E-14 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4102 4754026112e98c6a179fa9ecc060bc51 452 PRINTS PR00385 P450 superfamily signature 263 280 5.2E-14 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4102 4754026112e98c6a179fa9ecc060bc51 452 PRINTS PR00385 P450 superfamily signature 399 410 5.2E-14 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4102 4754026112e98c6a179fa9ecc060bc51 452 PRINTS PR00463 E-class P450 group I signature 37 56 8.8E-24 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4102 4754026112e98c6a179fa9ecc060bc51 452 PRINTS PR00463 E-class P450 group I signature 272 298 8.8E-24 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4102 4754026112e98c6a179fa9ecc060bc51 452 PRINTS PR00463 E-class P450 group I signature 389 399 8.8E-24 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4102 4754026112e98c6a179fa9ecc060bc51 452 PRINTS PR00463 E-class P450 group I signature 354 378 8.8E-24 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4102 4754026112e98c6a179fa9ecc060bc51 452 PRINTS PR00463 E-class P450 group I signature 252 269 8.8E-24 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4102 4754026112e98c6a179fa9ecc060bc51 452 PRINTS PR00463 E-class P450 group I signature 399 422 8.8E-24 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4102 4754026112e98c6a179fa9ecc060bc51 452 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 392 401 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_4102 4754026112e98c6a179fa9ecc060bc51 452 Gene3D G3DSA:1.10.630.10 17 451 7.0E-119 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4102 4754026112e98c6a179fa9ecc060bc51 452 Pfam PF00067 Cytochrome P450 26 431 5.8E-81 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4701 73392925601667d5cd7a1c3570cba872 181 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 13 98 2.4E-5 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amir_4701 73392925601667d5cd7a1c3570cba872 181 Gene3D G3DSA:2.30.110.10 9 151 5.3E-22 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_4701 73392925601667d5cd7a1c3570cba872 181 SUPERFAMILY SSF50475 10 150 6.48E-18 T 14-10-2018 Amir_4362 b6b23a5ea97de01c350e930a6bf0c18a 246 Pfam PF13649 Methyltransferase domain 53 143 4.0E-10 T 14-10-2018 Amir_4362 b6b23a5ea97de01c350e930a6bf0c18a 246 Gene3D G3DSA:2.20.130.10 156 213 7.5E-62 T 14-10-2018 Amir_4362 b6b23a5ea97de01c350e930a6bf0c18a 246 Gene3D G3DSA:3.40.50.150 19 227 7.5E-62 T 14-10-2018 Amir_4362 b6b23a5ea97de01c350e930a6bf0c18a 246 SUPERFAMILY SSF53335 16 229 2.37E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_1475 e676863f47df7f726f4c5e47b87dbd18 384 Pfam PF01139 tRNA-splicing ligase RtcB 137 384 3.1E-97 T 14-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Amir_1475 e676863f47df7f726f4c5e47b87dbd18 384 SUPERFAMILY SSF103365 12 384 1.16E-131 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Amir_1475 e676863f47df7f726f4c5e47b87dbd18 384 Gene3D G3DSA:3.90.1860.10 2 384 2.5E-110 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Amir_1475 e676863f47df7f726f4c5e47b87dbd18 384 Pfam PF01139 tRNA-splicing ligase RtcB 29 116 3.1E-29 T 14-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Amir_5942 70bf246a1f037df14c558da71fee552b 513 Gene3D G3DSA:3.20.20.360 2 394 9.7E-170 T 14-10-2018 Amir_5942 70bf246a1f037df14c558da71fee552b 513 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 17 512 1.0E-214 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Amir_5942 70bf246a1f037df14c558da71fee552b 513 Pfam PF01274 Malate synthase 6 512 5.3E-176 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Amir_5942 70bf246a1f037df14c558da71fee552b 513 SUPERFAMILY SSF51645 10 512 1.57E-168 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Amir_5942 70bf246a1f037df14c558da71fee552b 513 Gene3D G3DSA:1.20.1220.12 398 512 1.5E-38 T 14-10-2018 Amir_5942 70bf246a1f037df14c558da71fee552b 513 ProSitePatterns PS00510 Malate synthase signature. 248 263 - T 14-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Amir_5942 70bf246a1f037df14c558da71fee552b 513 PIRSF PIRSF001363 1 513 2.9E-211 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Amir_5413 723cdc5523943a4c6a6858f26c94798c 219 SUPERFAMILY SSF88659 108 178 3.27E-6 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5413 723cdc5523943a4c6a6858f26c94798c 219 Pfam PF04542 Sigma-70 region 2 26 92 3.5E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5413 723cdc5523943a4c6a6858f26c94798c 219 Gene3D G3DSA:1.10.1740.10 7 101 6.4E-15 T 14-10-2018 Amir_5413 723cdc5523943a4c6a6858f26c94798c 219 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 177 2.5E-18 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_5413 723cdc5523943a4c6a6858f26c94798c 219 SUPERFAMILY SSF88946 6 105 4.55E-20 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5413 723cdc5523943a4c6a6858f26c94798c 219 Gene3D G3DSA:1.10.10.10 102 181 4.2E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0267 4fb747cef4b21dc0a4acd3d2de1672e1 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 1.0E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_0267 4fb747cef4b21dc0a4acd3d2de1672e1 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 1.0E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_0267 4fb747cef4b21dc0a4acd3d2de1672e1 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 1.0E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_0267 4fb747cef4b21dc0a4acd3d2de1672e1 149 SUPERFAMILY SSF54909 67 141 9.12E-11 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_0267 4fb747cef4b21dc0a4acd3d2de1672e1 149 Gene3D G3DSA:1.10.10.10 1 56 2.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0267 4fb747cef4b21dc0a4acd3d2de1672e1 149 SUPERFAMILY SSF46785 5 64 1.26E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0267 4fb747cef4b21dc0a4acd3d2de1672e1 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Amir_0267 4fb747cef4b21dc0a4acd3d2de1672e1 149 Gene3D G3DSA:3.30.70.920 57 140 9.9E-16 T 14-10-2018 Amir_0267 4fb747cef4b21dc0a4acd3d2de1672e1 149 Pfam PF13404 AsnC-type helix-turn-helix domain 5 46 5.1E-18 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_0267 4fb747cef4b21dc0a4acd3d2de1672e1 149 SMART SM00344 5 112 1.0E-32 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Amir_0267 4fb747cef4b21dc0a4acd3d2de1672e1 149 Pfam PF01037 Lrp/AsnC ligand binding domain 88 139 1.1E-9 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Amir_6492 79f45cb353b114de58b19f3709d0c0eb 329 SUPERFAMILY SSF51735 4 156 1.12E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6492 79f45cb353b114de58b19f3709d0c0eb 329 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 4 323 6.3E-149 T 14-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 Amir_6492 79f45cb353b114de58b19f3709d0c0eb 329 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 327 57.402 T 14-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 Amir_6492 79f45cb353b114de58b19f3709d0c0eb 329 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 156 168 - T 14-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Amir_6492 79f45cb353b114de58b19f3709d0c0eb 329 SUPERFAMILY SSF56327 157 325 1.7E-62 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Amir_6492 79f45cb353b114de58b19f3709d0c0eb 329 Gene3D G3DSA:3.40.50.720 1 155 6.9E-54 T 14-10-2018 Amir_6492 79f45cb353b114de58b19f3709d0c0eb 329 Gene3D G3DSA:3.90.110.10 156 329 4.2E-68 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Amir_6492 79f45cb353b114de58b19f3709d0c0eb 329 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 157 324 1.2E-34 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 Amir_6492 79f45cb353b114de58b19f3709d0c0eb 329 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 148 4.2E-31 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_6492 79f45cb353b114de58b19f3709d0c0eb 329 PIRSF PIRSF000102 2 327 8.3E-63 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Amir_4553 39eddf338a35d5d1e49aca48468c3ee8 363 Pfam PF13565 Homeodomain-like domain 64 134 2.7E-12 T 14-10-2018 Amir_4553 39eddf338a35d5d1e49aca48468c3ee8 363 SUPERFAMILY SSF46689 23 138 5.38E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4553 39eddf338a35d5d1e49aca48468c3ee8 363 SUPERFAMILY SSF53098 205 340 1.37E-6 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_4553 39eddf338a35d5d1e49aca48468c3ee8 363 Pfam PF13358 DDE superfamily endonuclease 175 320 2.5E-21 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain Amir_6822 e559d281900364c0308a264c7cd5fc11 297 Pfam PF00583 Acetyltransferase (GNAT) family 48 129 3.3E-5 T 14-10-2018 IPR000182 GNAT domain Amir_6822 e559d281900364c0308a264c7cd5fc11 297 Pfam PF00583 Acetyltransferase (GNAT) family 198 286 3.0E-13 T 14-10-2018 IPR000182 GNAT domain Amir_6822 e559d281900364c0308a264c7cd5fc11 297 TIGRFAM TIGR03448 mycothiol_MshD: mycothiol synthase 5 295 5.7E-99 T 14-10-2018 IPR017813 Mycothiol acetyltransferase GO:0016747 Amir_6822 e559d281900364c0308a264c7cd5fc11 297 PIRSF PIRSF021524 1 297 7.6E-112 T 14-10-2018 IPR017813 Mycothiol acetyltransferase GO:0016747 Amir_6822 e559d281900364c0308a264c7cd5fc11 297 Gene3D G3DSA:3.40.630.30 1 297 5.3E-92 T 14-10-2018 Amir_6822 e559d281900364c0308a264c7cd5fc11 297 SUPERFAMILY SSF55729 6 294 8.56E-41 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_6822 e559d281900364c0308a264c7cd5fc11 297 Hamap MF_01698 Mycothiol acetyltransferase [mshD]. 4 297 36.238 T 14-10-2018 IPR017813 Mycothiol acetyltransferase GO:0016747 Amir_3502 880b547e60f477a25f4351002fc5c907 834 SMART SM00382 7 181 0.0085 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3502 880b547e60f477a25f4351002fc5c907 834 Gene3D G3DSA:3.30.470.30 435 614 4.0E-67 T 14-10-2018 Amir_3502 880b547e60f477a25f4351002fc5c907 834 Gene3D G3DSA:3.30.470.30 649 834 4.2E-74 T 14-10-2018 Amir_3502 880b547e60f477a25f4351002fc5c907 834 Pfam PF16536 PNKP adenylyltransferase domain, C-terminal region 775 834 2.4E-31 T 14-10-2018 IPR032390 Polynucleotide kinase-phosphatase, C-terminal Amir_3502 880b547e60f477a25f4351002fc5c907 834 SUPERFAMILY SSF56091 509 748 2.4E-12 T 14-10-2018 Amir_3502 880b547e60f477a25f4351002fc5c907 834 Gene3D G3DSA:3.60.21.10 171 423 1.4E-71 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Amir_3502 880b547e60f477a25f4351002fc5c907 834 SUPERFAMILY SSF56300 175 418 6.92E-43 T 14-10-2018 Amir_3502 880b547e60f477a25f4351002fc5c907 834 Gene3D G3DSA:3.40.50.300 1 170 8.2E-48 T 14-10-2018 Amir_3502 880b547e60f477a25f4351002fc5c907 834 Pfam PF13671 AAA domain 10 135 1.2E-22 T 14-10-2018 Amir_3502 880b547e60f477a25f4351002fc5c907 834 TIGRFAM TIGR04075 bacter_Pnkp: polynucleotide kinase-phosphatase 1 834 0.0 T 14-10-2018 IPR024028 Polynucleotide kinase-phosphatase, bacterial Amir_3502 880b547e60f477a25f4351002fc5c907 834 Pfam PF16542 PNKP adenylyltransferase domain, ligase domain 464 771 2.1E-138 T 14-10-2018 IPR032380 Polynucleotide kinase-phosphatase, ligase domain Amir_3502 880b547e60f477a25f4351002fc5c907 834 SUPERFAMILY SSF52540 3 130 6.48E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3502 880b547e60f477a25f4351002fc5c907 834 Pfam PF00149 Calcineurin-like phosphoesterase 181 388 5.4E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amir_0131 beb3c152bfd2f751b143044e3f963f11 266 Pfam PF17210 SdrD B-like domain 37 84 6.8E-7 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_0131 beb3c152bfd2f751b143044e3f963f11 266 Gene3D G3DSA:2.60.40.10 34 147 9.6E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_0131 beb3c152bfd2f751b143044e3f963f11 266 SUPERFAMILY SSF117074 33 83 7.72E-8 T 14-10-2018 Amir_6601 3837e997a7da4284c7e0da309b479e5b 61 Gene3D G3DSA:4.10.830.10 1 61 4.9E-31 T 14-10-2018 Amir_6601 3837e997a7da4284c7e0da309b479e5b 61 Pfam PF00253 Ribosomal protein S14p/S29e 11 60 3.1E-24 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6601 3837e997a7da4284c7e0da309b479e5b 61 SUPERFAMILY SSF57716 4 61 2.07E-21 T 14-10-2018 Amir_6601 3837e997a7da4284c7e0da309b479e5b 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6601 3837e997a7da4284c7e0da309b479e5b 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.534 T 14-10-2018 IPR023053 Ribosomal protein S14, type Z Amir_0222 44307eab87f2ea31857f098e7e1c3045 484 PRINTS PR00067 Catalase signature 83 101 1.1E-66 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_0222 44307eab87f2ea31857f098e7e1c3045 484 PRINTS PR00067 Catalase signature 123 141 1.1E-66 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_0222 44307eab87f2ea31857f098e7e1c3045 484 PRINTS PR00067 Catalase signature 104 121 1.1E-66 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_0222 44307eab87f2ea31857f098e7e1c3045 484 PRINTS PR00067 Catalase signature 320 346 1.1E-66 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_0222 44307eab87f2ea31857f098e7e1c3045 484 PRINTS PR00067 Catalase signature 288 315 1.1E-66 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_0222 44307eab87f2ea31857f098e7e1c3045 484 PRINTS PR00067 Catalase signature 21 44 1.1E-66 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_0222 44307eab87f2ea31857f098e7e1c3045 484 Gene3D G3DSA:2.40.180.10 1 484 9.3E-213 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Amir_0222 44307eab87f2ea31857f098e7e1c3045 484 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_0222 44307eab87f2ea31857f098e7e1c3045 484 SMART SM01060 8 389 3.4E-273 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_0222 44307eab87f2ea31857f098e7e1c3045 484 Pfam PF00199 Catalase 8 385 1.2E-180 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_0222 44307eab87f2ea31857f098e7e1c3045 484 SUPERFAMILY SSF56634 5 481 1.23E-196 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_0222 44307eab87f2ea31857f098e7e1c3045 484 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_0222 44307eab87f2ea31857f098e7e1c3045 484 PIRSF PIRSF038928 1 484 6.8E-227 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_0222 44307eab87f2ea31857f098e7e1c3045 484 Pfam PF06628 Catalase-related immune-responsive 418 479 1.3E-15 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_4531 0bb62bb6a52dbe3fe6d43b1537cbdabd 217 SUPERFAMILY SSF55785 20 120 1.51E-14 T 14-10-2018 IPR035965 PAS domain superfamily Amir_4531 0bb62bb6a52dbe3fe6d43b1537cbdabd 217 Gene3D G3DSA:1.10.10.10 132 206 6.5E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4531 0bb62bb6a52dbe3fe6d43b1537cbdabd 217 SUPERFAMILY SSF46894 127 203 2.21E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4531 0bb62bb6a52dbe3fe6d43b1537cbdabd 217 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 116 2.1E-7 T 14-10-2018 IPR000014 PAS domain Amir_4531 0bb62bb6a52dbe3fe6d43b1537cbdabd 217 Gene3D G3DSA:3.30.450.20 16 129 1.5E-13 T 14-10-2018 Amir_4531 0bb62bb6a52dbe3fe6d43b1537cbdabd 217 SMART SM00421 139 196 2.5E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4531 0bb62bb6a52dbe3fe6d43b1537cbdabd 217 Pfam PF08448 PAS fold 25 129 2.2E-8 T 14-10-2018 IPR013656 PAS fold-4 Amir_4531 0bb62bb6a52dbe3fe6d43b1537cbdabd 217 SMART SM00091 19 85 1.6E-8 T 14-10-2018 IPR000014 PAS domain Amir_4531 0bb62bb6a52dbe3fe6d43b1537cbdabd 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 195 2.0E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5886 3101749bb59dc891faa4992f83c22c69 599 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 29 137 1.5E-13 T 14-10-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 Amir_5886 3101749bb59dc891faa4992f83c22c69 599 Gene3D G3DSA:3.90.1310.30 148 300 3.5E-5 T 14-10-2018 Amir_5886 3101749bb59dc891faa4992f83c22c69 599 Gene3D G3DSA:3.40.710.10 303 592 5.7E-57 T 14-10-2018 Amir_5886 3101749bb59dc891faa4992f83c22c69 599 Pfam PF00905 Penicillin binding protein transpeptidase domain 324 579 7.4E-41 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Amir_5886 3101749bb59dc891faa4992f83c22c69 599 SUPERFAMILY SSF56519 151 303 1.7E-8 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Amir_5886 3101749bb59dc891faa4992f83c22c69 599 SUPERFAMILY SSF56601 260 584 4.44E-56 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_0540 a7c6e7fea1832db6c1f0f1123c5a899b 251 Pfam PF08445 FR47-like protein 146 225 1.5E-11 T 14-10-2018 IPR013653 FR47-like GO:0016747 Amir_0540 a7c6e7fea1832db6c1f0f1123c5a899b 251 Gene3D G3DSA:3.40.630.30 24 230 3.8E-26 T 14-10-2018 Amir_0540 a7c6e7fea1832db6c1f0f1123c5a899b 251 SUPERFAMILY SSF55729 115 226 7.98E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_4860 d1cb5de344b760b06e16461fe7748d53 582 SUPERFAMILY SSF56801 14 568 2.35E-101 T 14-10-2018 Amir_4860 d1cb5de344b760b06e16461fe7748d53 582 Gene3D G3DSA:3.30.300.30 460 581 1.0E-33 T 14-10-2018 Amir_4860 d1cb5de344b760b06e16461fe7748d53 582 Gene3D G3DSA:3.40.50.12780 12 458 4.2E-130 T 14-10-2018 Amir_4860 d1cb5de344b760b06e16461fe7748d53 582 Pfam PF00501 AMP-binding enzyme 21 465 4.3E-77 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3817 f6ae6d89d5d443e2900b93fb99e86786 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 64 4.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3817 f6ae6d89d5d443e2900b93fb99e86786 223 Gene3D G3DSA:1.10.357.10 2 223 6.0E-67 T 14-10-2018 Amir_3817 f6ae6d89d5d443e2900b93fb99e86786 223 SUPERFAMILY SSF48498 82 219 3.34E-24 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3817 f6ae6d89d5d443e2900b93fb99e86786 223 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 78 192 2.3E-10 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 Amir_3817 f6ae6d89d5d443e2900b93fb99e86786 223 SUPERFAMILY SSF46689 14 75 4.72E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0427 16fdb24ecebce488919743fb28144b56 195 Gene3D G3DSA:3.90.45.10 1 190 8.3E-66 T 14-10-2018 IPR036821 Peptide deformylase superfamily Amir_0427 16fdb24ecebce488919743fb28144b56 195 SUPERFAMILY SSF56420 3 181 5.1E-53 T 14-10-2018 IPR036821 Peptide deformylase superfamily Amir_0427 16fdb24ecebce488919743fb28144b56 195 PRINTS PR01576 Peptide deformylase signature 97 108 1.9E-31 T 14-10-2018 IPR023635 Peptide deformylase Amir_0427 16fdb24ecebce488919743fb28144b56 195 PRINTS PR01576 Peptide deformylase signature 109 127 1.9E-31 T 14-10-2018 IPR023635 Peptide deformylase Amir_0427 16fdb24ecebce488919743fb28144b56 195 PRINTS PR01576 Peptide deformylase signature 128 157 1.9E-31 T 14-10-2018 IPR023635 Peptide deformylase Amir_0427 16fdb24ecebce488919743fb28144b56 195 PRINTS PR01576 Peptide deformylase signature 33 62 1.9E-31 T 14-10-2018 IPR023635 Peptide deformylase Amir_0427 16fdb24ecebce488919743fb28144b56 195 Hamap MF_00163 Peptide deformylase [def]. 2 170 27.894 T 14-10-2018 IPR023635 Peptide deformylase Amir_0427 16fdb24ecebce488919743fb28144b56 195 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 10 164 7.1E-37 T 14-10-2018 IPR023635 Peptide deformylase Amir_0427 16fdb24ecebce488919743fb28144b56 195 PIRSF PIRSF004749 1 177 8.9E-41 T 14-10-2018 IPR023635 Peptide deformylase Amir_0427 16fdb24ecebce488919743fb28144b56 195 Pfam PF01327 Polypeptide deformylase 4 158 9.4E-41 T 14-10-2018 IPR023635 Peptide deformylase Amir_3773 3a4326f6f92fae32664dd00c3152dae5 420 Gene3D G3DSA:1.20.1250.20 10 408 8.0E-29 T 14-10-2018 Amir_3773 3a4326f6f92fae32664dd00c3152dae5 420 Pfam PF05977 Transmembrane secretion effector 14 412 4.2E-27 T 14-10-2018 IPR010290 Transmembrane secretion effector Amir_3773 3a4326f6f92fae32664dd00c3152dae5 420 SUPERFAMILY SSF103473 11 411 4.58E-34 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_3380 860bb64a6c9573850012b2fabcf1dc70 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3380 860bb64a6c9573850012b2fabcf1dc70 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3380 860bb64a6c9573850012b2fabcf1dc70 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3380 860bb64a6c9573850012b2fabcf1dc70 299 Gene3D G3DSA:1.10.10.10 3 88 6.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3380 860bb64a6c9573850012b2fabcf1dc70 299 SUPERFAMILY SSF46785 5 113 3.71E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3380 860bb64a6c9573850012b2fabcf1dc70 299 Pfam PF03466 LysR substrate binding domain 90 297 7.2E-42 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_3380 860bb64a6c9573850012b2fabcf1dc70 299 SUPERFAMILY SSF53850 91 298 2.58E-40 T 14-10-2018 Amir_3380 860bb64a6c9573850012b2fabcf1dc70 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 5.5E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3380 860bb64a6c9573850012b2fabcf1dc70 299 Gene3D G3DSA:3.40.190.290 94 299 8.0E-46 T 14-10-2018 Amir_5693 9863800d2ad15573a55762bba18ad883 1512 Gene3D G3DSA:2.160.20.60 1233 1500 5.9E-103 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Amir_5693 9863800d2ad15573a55762bba18ad883 1512 Gene3D G3DSA:3.60.20.10 22 446 7.0E-174 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_5693 9863800d2ad15573a55762bba18ad883 1512 SUPERFAMILY SSF56235 22 440 6.33E-144 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_5693 9863800d2ad15573a55762bba18ad883 1512 Pfam PF01493 GXGXG motif 1262 1438 2.1E-76 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Amir_5693 9863800d2ad15573a55762bba18ad883 1512 Gene3D G3DSA:3.20.20.70 447 801 9.8E-128 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5693 9863800d2ad15573a55762bba18ad883 1512 Pfam PF04898 Glutamate synthase central domain 465 752 9.9E-108 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 Amir_5693 9863800d2ad15573a55762bba18ad883 1512 Pfam PF01645 Conserved region in glutamate synthase 817 1181 8.1E-152 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Amir_5693 9863800d2ad15573a55762bba18ad883 1512 Pfam PF00310 Glutamine amidotransferases class-II 22 438 1.9E-173 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Amir_5693 9863800d2ad15573a55762bba18ad883 1512 SUPERFAMILY SSF51395 453 1217 2.89E-260 T 14-10-2018 Amir_5693 9863800d2ad15573a55762bba18ad883 1512 Gene3D G3DSA:3.20.20.70 802 1232 9.2E-191 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5693 9863800d2ad15573a55762bba18ad883 1512 SUPERFAMILY SSF69336 1230 1492 1.31E-88 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Amir_1415 f9a109a6df32c2df67e23fd48c69d303 657 Pfam PF00012 Hsp70 protein 89 345 1.3E-28 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_1415 f9a109a6df32c2df67e23fd48c69d303 657 Gene3D G3DSA:3.30.420.40 160 335 5.4E-97 T 14-10-2018 Amir_1415 f9a109a6df32c2df67e23fd48c69d303 657 SUPERFAMILY SSF53067 162 346 2.05E-32 T 14-10-2018 Amir_1415 f9a109a6df32c2df67e23fd48c69d303 657 PRINTS PR00301 70kDa heat shock protein signature 172 182 2.8E-8 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_1415 f9a109a6df32c2df67e23fd48c69d303 657 PRINTS PR00301 70kDa heat shock protein signature 2 15 2.8E-8 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_1415 f9a109a6df32c2df67e23fd48c69d303 657 PRINTS PR00301 70kDa heat shock protein signature 304 320 2.8E-8 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_1415 f9a109a6df32c2df67e23fd48c69d303 657 PRINTS PR00301 70kDa heat shock protein signature 30 42 2.8E-8 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_1415 f9a109a6df32c2df67e23fd48c69d303 657 SUPERFAMILY SSF53067 3 156 2.1E-22 T 14-10-2018 Amir_1415 f9a109a6df32c2df67e23fd48c69d303 657 Gene3D G3DSA:3.30.420.40 5 345 5.4E-97 T 14-10-2018 Amir_1415 f9a109a6df32c2df67e23fd48c69d303 657 Gene3D G3DSA:3.90.640.10 198 285 5.4E-97 T 14-10-2018 Amir_5352 d14413f00a83cc7206c0fc04880d654e 962 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 11 960 25.341 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Amir_5352 d14413f00a83cc7206c0fc04880d654e 962 Gene3D G3DSA:3.90.1150.10 770 909 1.3E-36 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_5352 d14413f00a83cc7206c0fc04880d654e 962 SUPERFAMILY SSF53383 20 448 1.23E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_5352 d14413f00a83cc7206c0fc04880d654e 962 Pfam PF02347 Glycine cleavage system P-protein 455 738 4.7E-9 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Amir_5352 d14413f00a83cc7206c0fc04880d654e 962 Pfam PF02347 Glycine cleavage system P-protein 19 448 5.5E-173 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Amir_5352 d14413f00a83cc7206c0fc04880d654e 962 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 20 954 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Amir_5352 d14413f00a83cc7206c0fc04880d654e 962 SUPERFAMILY SSF53383 463 956 2.54E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_5352 d14413f00a83cc7206c0fc04880d654e 962 Gene3D G3DSA:3.40.640.10 99 362 3.5E-108 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_5352 d14413f00a83cc7206c0fc04880d654e 962 Gene3D G3DSA:3.40.640.10 528 746 1.3E-54 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_1382 2a901f323d3de397b241047594469031 376 Pfam PF00534 Glycosyl transferases group 1 185 356 4.2E-38 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Amir_1382 2a901f323d3de397b241047594469031 376 SUPERFAMILY SSF53756 5 374 1.22E-78 T 14-10-2018 Amir_1382 2a901f323d3de397b241047594469031 376 Gene3D G3DSA:3.40.50.2000 170 363 9.2E-124 T 14-10-2018 Amir_1382 2a901f323d3de397b241047594469031 376 Gene3D G3DSA:3.40.50.2000 5 364 9.2E-124 T 14-10-2018 Amir_1382 2a901f323d3de397b241047594469031 376 Pfam PF13439 Glycosyltransferase Family 4 16 172 2.7E-13 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amir_2345 98620632d4d80a4fd565e83291d671cd 226 Pfam PF02108 Flagellar assembly protein FliH 96 219 1.8E-12 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Amir_2831 25a6aef8f60edb1423b8cfb005c998ed 629 SUPERFAMILY SSF48208 96 375 1.51E-23 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_2831 25a6aef8f60edb1423b8cfb005c998ed 629 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 30 550 1.1E-110 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 Amir_4656 cd1fdefb357f0f3aa9ffcb18edf75a35 247 Gene3D G3DSA:2.60.120.620 24 152 1.0E-5 T 14-10-2018 Amir_4656 cd1fdefb357f0f3aa9ffcb18edf75a35 247 SUPERFAMILY SSF51197 29 147 1.01E-5 T 14-10-2018 Amir_3912 a13f859442e3fde2fb1d5772251ddf16 339 Gene3D G3DSA:3.40.50.1980 25 147 6.7E-15 T 14-10-2018 Amir_3912 a13f859442e3fde2fb1d5772251ddf16 339 Gene3D G3DSA:3.40.50.1980 151 324 5.7E-53 T 14-10-2018 Amir_3912 a13f859442e3fde2fb1d5772251ddf16 339 SUPERFAMILY SSF53807 47 320 2.83E-36 T 14-10-2018 Amir_3912 a13f859442e3fde2fb1d5772251ddf16 339 Pfam PF01497 Periplasmic binding protein 60 300 9.9E-23 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Amir_2756 998525ec896150938509ab8bd5bc3c62 403 Pfam PF01979 Amidohydrolase family 52 400 5.4E-39 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_2756 998525ec896150938509ab8bd5bc3c62 403 SUPERFAMILY SSF51338 2 402 1.3E-22 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_2756 998525ec896150938509ab8bd5bc3c62 403 Gene3D G3DSA:2.30.40.10 10 399 1.9E-129 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_2756 998525ec896150938509ab8bd5bc3c62 403 Gene3D G3DSA:3.20.20.140 57 357 1.9E-129 T 14-10-2018 Amir_2756 998525ec896150938509ab8bd5bc3c62 403 SUPERFAMILY SSF51556 56 355 4.54E-79 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_5007 e3ef09966475645f380916c6f4166219 238 Gene3D G3DSA:1.10.10.10 131 237 8.1E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5007 e3ef09966475645f380916c6f4166219 238 SMART SM00862 158 234 9.4E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_5007 e3ef09966475645f380916c6f4166219 238 SMART SM00448 12 122 1.7E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5007 e3ef09966475645f380916c6f4166219 238 Pfam PF00072 Response regulator receiver domain 14 122 1.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5007 e3ef09966475645f380916c6f4166219 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 4.6E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_5007 e3ef09966475645f380916c6f4166219 238 SUPERFAMILY SSF46894 144 235 3.23E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_5007 e3ef09966475645f380916c6f4166219 238 SUPERFAMILY SSF52172 10 175 5.69E-39 T 14-10-2018 IPR011006 CheY-like superfamily Amir_5007 e3ef09966475645f380916c6f4166219 238 Gene3D G3DSA:3.40.50.2300 5 130 9.5E-34 T 14-10-2018 Amir_3301 1fed29b67a9e481dd8cd0592f3918e74 485 SUPERFAMILY SSF75005 194 476 1.96E-24 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3301 1fed29b67a9e481dd8cd0592f3918e74 485 Pfam PF00553 Cellulose binding domain 41 140 1.1E-32 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_3301 1fed29b67a9e481dd8cd0592f3918e74 485 Pfam PF03664 Glycosyl hydrolase family 62 167 451 2.1E-62 T 14-10-2018 IPR005193 Glycoside hydrolase, family 62, arabinosidase GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 Amir_3301 1fed29b67a9e481dd8cd0592f3918e74 485 SUPERFAMILY SSF49384 37 142 1.6E-32 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_3301 1fed29b67a9e481dd8cd0592f3918e74 485 SMART SM00637 41 140 1.8E-47 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_3301 1fed29b67a9e481dd8cd0592f3918e74 485 Gene3D G3DSA:2.60.40.290 34 143 1.3E-34 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_3301 1fed29b67a9e481dd8cd0592f3918e74 485 Gene3D G3DSA:2.115.10.20 168 485 5.4E-146 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3158 6418dcb896af014e78a8432b67c48d51 358 SUPERFAMILY SSF47240 20 329 4.58E-95 T 14-10-2018 IPR009078 Ferritin-like superfamily Amir_3158 6418dcb896af014e78a8432b67c48d51 358 Gene3D G3DSA:1.10.620.20 17 351 1.4E-107 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Amir_3158 6418dcb896af014e78a8432b67c48d51 358 Pfam PF00268 Ribonucleotide reductase, small chain 38 325 3.6E-85 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_3158 6418dcb896af014e78a8432b67c48d51 358 PIRSF PIRSF000355 10 358 1.2E-126 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amir_5482 5560dd182cb3410b3f5cc43dd0512679 464 Pfam PF02447 GntP family permease 18 463 8.5E-130 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Amir_5482 5560dd182cb3410b3f5cc43dd0512679 464 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 15 464 1.9E-116 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Amir_5482 5560dd182cb3410b3f5cc43dd0512679 464 PIRSF PIRSF002746 7 464 6.6E-151 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Amir_0745 b4323e3ef8ef51612984c96761402c3b 97 SUPERFAMILY SSF55248 1 93 1.24E-25 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Amir_0745 b4323e3ef8ef51612984c96761402c3b 97 Gene3D G3DSA:3.30.1360.20 4 96 6.3E-25 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Amir_0745 b4323e3ef8ef51612984c96761402c3b 97 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 4 91 5.1E-25 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Amir_5449 85170c6f4e917583786785e2b215604d 463 Gene3D G3DSA:1.20.200.10 121 450 2.8E-165 T 14-10-2018 Amir_5449 85170c6f4e917583786785e2b215604d 463 SUPERFAMILY SSF48557 7 457 3.14E-134 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Amir_5449 85170c6f4e917583786785e2b215604d 463 Gene3D G3DSA:1.10.40.30 362 434 2.8E-165 T 14-10-2018 Amir_5449 85170c6f4e917583786785e2b215604d 463 Gene3D G3DSA:1.10.275.10 26 231 2.8E-165 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Amir_5449 85170c6f4e917583786785e2b215604d 463 Pfam PF00206 Lyase 14 302 1.7E-61 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Amir_5449 85170c6f4e917583786785e2b215604d 463 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 2.0E-26 T 14-10-2018 IPR000362 Fumarate lyase family Amir_5449 85170c6f4e917583786785e2b215604d 463 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 2.0E-26 T 14-10-2018 IPR000362 Fumarate lyase family Amir_5449 85170c6f4e917583786785e2b215604d 463 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 2.0E-26 T 14-10-2018 IPR000362 Fumarate lyase family Amir_5449 85170c6f4e917583786785e2b215604d 463 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 2.0E-26 T 14-10-2018 IPR000362 Fumarate lyase family Amir_5449 85170c6f4e917583786785e2b215604d 463 Pfam PF14698 Argininosuccinate lyase C-terminal 365 433 3.9E-22 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amir_5449 85170c6f4e917583786785e2b215604d 463 TIGRFAM TIGR00838 argH: argininosuccinate lyase 4 457 3.5E-179 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amir_5449 85170c6f4e917583786785e2b215604d 463 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Amir_5449 85170c6f4e917583786785e2b215604d 463 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 455 39.479 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amir_5449 85170c6f4e917583786785e2b215604d 463 PRINTS PR00145 Argininosuccinate lyase family signature 195 211 2.4E-53 T 14-10-2018 Amir_5449 85170c6f4e917583786785e2b215604d 463 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 2.4E-53 T 14-10-2018 Amir_5449 85170c6f4e917583786785e2b215604d 463 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 2.4E-53 T 14-10-2018 Amir_5449 85170c6f4e917583786785e2b215604d 463 PRINTS PR00145 Argininosuccinate lyase family signature 312 331 2.4E-53 T 14-10-2018 Amir_5449 85170c6f4e917583786785e2b215604d 463 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 2.4E-53 T 14-10-2018 Amir_5449 85170c6f4e917583786785e2b215604d 463 PRINTS PR00145 Argininosuccinate lyase family signature 233 257 2.4E-53 T 14-10-2018 Amir_0256 f740d0071bb27129c21f28a17e539385 226 SUPERFAMILY SSF52833 106 207 2.78E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_0256 f740d0071bb27129c21f28a17e539385 226 Gene3D G3DSA:3.40.30.10 104 224 4.0E-17 T 14-10-2018 Amir_0256 f740d0071bb27129c21f28a17e539385 226 ProSitePatterns PS00194 Thioredoxin family active site. 121 139 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Amir_0256 f740d0071bb27129c21f28a17e539385 226 Pfam PF00578 AhpC/TSA family 105 207 1.1E-9 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amir_0593 1ea52a6a4a809723556d60f2bd5bfd0d 389 Pfam PF00266 Aminotransferase class-V 7 363 4.9E-70 T 14-10-2018 IPR000192 Aminotransferase class V domain Amir_0593 1ea52a6a4a809723556d60f2bd5bfd0d 389 SUPERFAMILY SSF53383 5 371 4.12E-94 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_0593 1ea52a6a4a809723556d60f2bd5bfd0d 389 Gene3D G3DSA:3.40.640.10 18 258 1.5E-125 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_0593 1ea52a6a4a809723556d60f2bd5bfd0d 389 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Amir_0593 1ea52a6a4a809723556d60f2bd5bfd0d 389 Gene3D G3DSA:3.90.1150.10 7 373 1.5E-125 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_0593 1ea52a6a4a809723556d60f2bd5bfd0d 389 PIRSF PIRSF005572 4 381 4.6E-115 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Amir_0526 1979da26c28e46d94878b3525591ac62 198 Gene3D G3DSA:1.10.10.60 3 56 1.9E-6 T 14-10-2018 Amir_0526 1979da26c28e46d94878b3525591ac62 198 Gene3D G3DSA:1.10.357.10 57 194 2.8E-11 T 14-10-2018 Amir_0526 1979da26c28e46d94878b3525591ac62 198 SUPERFAMILY SSF46689 16 83 2.72E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0526 1979da26c28e46d94878b3525591ac62 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 61 1.8E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0526 1979da26c28e46d94878b3525591ac62 198 SUPERFAMILY SSF48498 111 193 8.56E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_1318 225213f51a05809ac667ca2c6f08c5aa 167 Pfam PF11343 Protein of unknown function (DUF3145) 10 165 3.8E-73 T 14-10-2018 IPR021491 Protein of unknown function DUF3145 Amir_0990 9c926f2135cb4c6dbf05375e529ab1e1 406 Gene3D G3DSA:3.30.70.260 4 84 1.1E-13 T 14-10-2018 Amir_0990 9c926f2135cb4c6dbf05375e529ab1e1 406 Gene3D G3DSA:1.10.150.210 192 252 9.5E-70 T 14-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 Amir_0990 9c926f2135cb4c6dbf05375e529ab1e1 406 Gene3D G3DSA:3.30.70.260 92 178 2.2E-28 T 14-10-2018 Amir_0990 9c926f2135cb4c6dbf05375e529ab1e1 406 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 169 384 2.2E-72 T 14-10-2018 Amir_0990 9c926f2135cb4c6dbf05375e529ab1e1 406 Gene3D G3DSA:3.40.50.1000 182 372 9.5E-70 T 14-10-2018 IPR023214 HAD superfamily Amir_0990 9c926f2135cb4c6dbf05375e529ab1e1 406 Pfam PF12710 haloacid dehalogenase-like hydrolase 183 349 1.7E-25 T 14-10-2018 Amir_0990 9c926f2135cb4c6dbf05375e529ab1e1 406 Pfam PF13740 ACT domain 7 78 7.3E-20 T 14-10-2018 Amir_0990 9c926f2135cb4c6dbf05375e529ab1e1 406 SUPERFAMILY SSF55021 5 79 1.03E-9 T 14-10-2018 Amir_0990 9c926f2135cb4c6dbf05375e529ab1e1 406 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 182 350 2.5E-28 T 14-10-2018 Amir_0990 9c926f2135cb4c6dbf05375e529ab1e1 406 SUPERFAMILY SSF56784 180 389 7.2E-50 T 14-10-2018 IPR036412 HAD-like superfamily Amir_1126 144f574dda5b9a7f9dc3d378a867b282 174 SUPERFAMILY SSF50249 7 132 1.0E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_1126 144f574dda5b9a7f9dc3d378a867b282 174 Gene3D G3DSA:2.40.50.140 4 118 9.9E-29 T 14-10-2018 Amir_1126 144f574dda5b9a7f9dc3d378a867b282 174 Pfam PF00436 Single-strand binding protein family 7 106 6.4E-10 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 5.7E-20 T 14-10-2018 Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 5.7E-20 T 14-10-2018 Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 126 144 5.7E-20 T 14-10-2018 Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 280 302 5.7E-20 T 14-10-2018 Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 30 49 5.7E-20 T 14-10-2018 Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 29 325 7.0E-45 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 Gene3D G3DSA:3.30.390.30 344 422 1.4E-10 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 SUPERFAMILY SSF55424 336 409 2.75E-17 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 Gene3D G3DSA:3.50.50.60 139 263 4.1E-97 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 Gene3D G3DSA:3.50.50.60 30 325 4.1E-97 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 SUPERFAMILY SSF51905 28 335 6.48E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 129 138 4.6E-17 T 14-10-2018 Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 18 40 4.6E-17 T 14-10-2018 Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 4.6E-17 T 14-10-2018 Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 295 302 4.6E-17 T 14-10-2018 Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 4.6E-17 T 14-10-2018 Amir_2893 e3c26785c63a0b00346b66cc2a50e41b 478 Pfam PF14759 Reductase C-terminal 344 406 3.6E-9 T 14-10-2018 IPR028202 Reductase, C-terminal Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 SMART SM00382 542 721 1.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 SMART SM00382 205 349 4.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 SUPERFAMILY SSF81923 3 145 1.67E-32 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 SMART SM01086 720 811 4.4E-33 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 720 798 2.0E-24 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 Gene3D G3DSA:1.10.8.60 720 824 1.5E-26 T 14-10-2018 Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 SUPERFAMILY SSF52540 491 804 3.49E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 Pfam PF02151 UvrB/uvrC motif 422 454 1.3E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 Gene3D G3DSA:3.40.50.300 472 718 4.8E-95 T 14-10-2018 Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 142 3.9E-17 T 14-10-2018 IPR004176 Clp, N-terminal Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 68 6.5E-18 T 14-10-2018 IPR004176 Clp, N-terminal Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 300 312 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 Gene3D G3DSA:3.40.50.300 354 470 3.5E-38 T 14-10-2018 Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 Pfam PF07724 AAA domain (Cdc48 subfamily) 541 714 8.3E-51 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 Gene3D G3DSA:3.40.50.300 165 353 4.1E-71 T 14-10-2018 Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 546 564 1.1E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 591 609 1.1E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 620 638 1.1E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 653 667 1.1E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 339 2.6E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 Gene3D G3DSA:1.10.1780.10 1 148 4.0E-64 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Amir_0335 ac733dd45a7c1fab572730c0c079cae9 852 SUPERFAMILY SSF52540 168 489 5.41E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2610 bb124739f63e1d9f8dc6c552de4a8b3d 289 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 56 266 1.0E-33 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 Amir_2610 bb124739f63e1d9f8dc6c552de4a8b3d 289 Gene3D G3DSA:3.40.830.10 25 289 4.7E-66 T 14-10-2018 Amir_2610 bb124739f63e1d9f8dc6c552de4a8b3d 289 PIRSF PIRSF006157 30 289 6.2E-69 T 14-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 Amir_2610 bb124739f63e1d9f8dc6c552de4a8b3d 289 SUPERFAMILY SSF53213 34 288 9.02E-72 T 14-10-2018 Amir_3864 b1c30e7b6e1e594c8730b0ac3bc58fc5 566 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 203 536 3.6E-73 T 14-10-2018 IPR003776 YcaO-like domain Amir_3864 b1c30e7b6e1e594c8730b0ac3bc58fc5 566 Gene3D G3DSA:1.10.490.140 289 392 1.4E-20 T 14-10-2018 Amir_3864 b1c30e7b6e1e594c8730b0ac3bc58fc5 566 TIGRFAM TIGR03882 cyclo_dehyd_2: bacteriocin biosynthesis cyclodehydratase domain 25 177 3.8E-11 T 14-10-2018 IPR022291 Bacteriocin biosynthesis, cyclodehydratase domain Amir_3864 b1c30e7b6e1e594c8730b0ac3bc58fc5 566 TIGRFAM TIGR03604 TOMM_cyclo_SagD: thiazole/oxazole-forming peptide maturase, SagD family component 203 555 3.4E-67 T 14-10-2018 IPR027624 Thiazole/oxazole-forming peptide maturase, SagD family component Amir_3826 25d93f281473daac48282eaa1f5fad34 141 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 27 74 3.3E-12 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Amir_3826 25d93f281473daac48282eaa1f5fad34 141 SUPERFAMILY SSF69118 12 140 6.39E-33 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amir_3826 25d93f281473daac48282eaa1f5fad34 141 Pfam PF02627 Carboxymuconolactone decarboxylase family 13 92 2.3E-17 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Amir_3826 25d93f281473daac48282eaa1f5fad34 141 Gene3D G3DSA:1.20.1290.10 7 140 1.1E-36 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amir_6155 f11fab711e06f2e90070855d62ef0066 358 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 59 72 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Amir_6155 f11fab711e06f2e90070855d62ef0066 358 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 325 2.8E-69 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amir_6155 f11fab711e06f2e90070855d62ef0066 358 PIRSF PIRSF038945 2 357 6.7E-163 T 14-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 Amir_6155 f11fab711e06f2e90070855d62ef0066 358 SUPERFAMILY SSF53686 11 343 1.7E-99 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amir_6155 f11fab711e06f2e90070855d62ef0066 358 Gene3D G3DSA:3.40.50.1100 18 331 5.9E-121 T 14-10-2018 Amir_6155 f11fab711e06f2e90070855d62ef0066 358 Gene3D G3DSA:3.40.50.1100 67 163 5.9E-121 T 14-10-2018 Amir_6155 f11fab711e06f2e90070855d62ef0066 358 TIGRFAM TIGR00260 thrC: threonine synthase 18 332 5.3E-90 T 14-10-2018 IPR004450 Threonine synthase-like Amir_3132 9577e5b4b8932bfb4facbb599ff39406 444 SUPERFAMILY SSF48264 15 438 1.83E-81 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3132 9577e5b4b8932bfb4facbb599ff39406 444 PRINTS PR00463 E-class P450 group I signature 343 367 2.2E-16 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3132 9577e5b4b8932bfb4facbb599ff39406 444 PRINTS PR00463 E-class P450 group I signature 253 270 2.2E-16 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3132 9577e5b4b8932bfb4facbb599ff39406 444 PRINTS PR00463 E-class P450 group I signature 376 386 2.2E-16 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3132 9577e5b4b8932bfb4facbb599ff39406 444 PRINTS PR00463 E-class P450 group I signature 41 60 2.2E-16 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3132 9577e5b4b8932bfb4facbb599ff39406 444 PRINTS PR00463 E-class P450 group I signature 386 409 2.2E-16 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3132 9577e5b4b8932bfb4facbb599ff39406 444 Pfam PF00067 Cytochrome P450 16 417 2.0E-51 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3132 9577e5b4b8932bfb4facbb599ff39406 444 PRINTS PR00385 P450 superfamily signature 264 281 1.4E-14 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3132 9577e5b4b8932bfb4facbb599ff39406 444 PRINTS PR00385 P450 superfamily signature 386 397 1.4E-14 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3132 9577e5b4b8932bfb4facbb599ff39406 444 PRINTS PR00385 P450 superfamily signature 304 315 1.4E-14 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3132 9577e5b4b8932bfb4facbb599ff39406 444 PRINTS PR00385 P450 superfamily signature 377 386 1.4E-14 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3132 9577e5b4b8932bfb4facbb599ff39406 444 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 379 388 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_3132 9577e5b4b8932bfb4facbb599ff39406 444 Gene3D G3DSA:1.10.630.10 8 437 7.0E-82 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_7062 62ce9c40a32d08edec06bcb083c43d82 512 SUPERFAMILY SSF51735 3 281 1.22E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_7062 62ce9c40a32d08edec06bcb083c43d82 512 Pfam PF13460 NAD(P)H-binding 8 112 1.0E-22 T 14-10-2018 IPR016040 NAD(P)-binding domain Amir_7062 62ce9c40a32d08edec06bcb083c43d82 512 Pfam PF11066 Protein of unknown function (DUF2867) 326 471 2.5E-40 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 Amir_7062 62ce9c40a32d08edec06bcb083c43d82 512 Gene3D G3DSA:3.40.50.720 3 247 2.9E-48 T 14-10-2018 Amir_0955 a8284e7be4efc45ac698e9e9e062bcc2 254 SUPERFAMILY SSF52833 79 252 4.48E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_0955 a8284e7be4efc45ac698e9e9e062bcc2 254 Pfam PF13462 Thioredoxin 85 251 2.8E-25 T 14-10-2018 IPR012336 Thioredoxin-like fold Amir_0955 a8284e7be4efc45ac698e9e9e062bcc2 254 Gene3D G3DSA:3.40.30.10 53 253 1.4E-49 T 14-10-2018 Amir_4114 ba4d9e6351a51c9f514a745b3011c801 232 Pfam PF05988 Bacterial protein of unknown function (DUF899) 1 212 4.1E-85 T 14-10-2018 IPR010296 Protein of unknown function DUF899, thioredoxin-like Amir_4114 ba4d9e6351a51c9f514a745b3011c801 232 SUPERFAMILY SSF52833 51 192 5.6E-5 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_3032 64aa42dfa31465653f34639d2f0d145e 548 SUPERFAMILY SSF52540 396 527 2.37E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3032 64aa42dfa31465653f34639d2f0d145e 548 SUPERFAMILY SSF56091 3 205 3.35E-35 T 14-10-2018 Amir_3032 64aa42dfa31465653f34639d2f0d145e 548 Pfam PF13671 AAA domain 399 524 1.1E-15 T 14-10-2018 Amir_3032 64aa42dfa31465653f34639d2f0d145e 548 Gene3D G3DSA:3.30.470.30 22 173 1.6E-11 T 14-10-2018 Amir_3032 64aa42dfa31465653f34639d2f0d145e 548 Gene3D G3DSA:3.40.50.300 391 536 5.2E-19 T 14-10-2018 Amir_3032 64aa42dfa31465653f34639d2f0d145e 548 Pfam PF09414 RNA ligase 33 182 4.2E-24 T 14-10-2018 IPR021122 RNA ligase domain, REL/Rln2 Amir_5699 b277ee020a420d92b476fff7037f83a2 371 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 13 276 4.6E-45 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Amir_5699 b277ee020a420d92b476fff7037f83a2 371 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 279 15.295 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Amir_5699 b277ee020a420d92b476fff7037f83a2 371 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 15 273 4.7E-64 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Amir_5699 b277ee020a420d92b476fff7037f83a2 371 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Amir_4289 1dbd4e1dee40fdc797d080267c6e34f3 441 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 21 440 7.3E-154 T 14-10-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 Amir_4289 1dbd4e1dee40fdc797d080267c6e34f3 441 Pfam PF04261 Dyp-type peroxidase family 80 429 7.9E-105 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 Amir_4289 1dbd4e1dee40fdc797d080267c6e34f3 441 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 80 428 4.0E-92 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 Amir_4289 1dbd4e1dee40fdc797d080267c6e34f3 441 SUPERFAMILY SSF54909 75 434 1.73E-89 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_2291 5af54a765ed7af8d7b537e44c4b25ce3 535 Gene3D G3DSA:3.40.50.300 275 516 3.9E-49 T 14-10-2018 Amir_2291 5af54a765ed7af8d7b537e44c4b25ce3 535 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_2291 5af54a765ed7af8d7b537e44c4b25ce3 535 Pfam PF00005 ABC transporter 301 445 4.4E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2291 5af54a765ed7af8d7b537e44c4b25ce3 535 Gene3D G3DSA:3.40.50.300 1 236 1.1E-66 T 14-10-2018 Amir_2291 5af54a765ed7af8d7b537e44c4b25ce3 535 SMART SM00382 309 494 1.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2291 5af54a765ed7af8d7b537e44c4b25ce3 535 SMART SM00382 28 219 4.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2291 5af54a765ed7af8d7b537e44c4b25ce3 535 SUPERFAMILY SSF52540 278 508 9.19E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2291 5af54a765ed7af8d7b537e44c4b25ce3 535 Pfam PF00005 ABC transporter 19 170 3.4E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2291 5af54a765ed7af8d7b537e44c4b25ce3 535 SUPERFAMILY SSF52540 2 230 5.66E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4971 d3de1abad313664ac0965191e510a697 384 Pfam PF01494 FAD binding domain 271 307 8.2E-8 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_4971 d3de1abad313664ac0965191e510a697 384 Pfam PF01494 FAD binding domain 3 155 1.8E-12 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_4971 d3de1abad313664ac0965191e510a697 384 SUPERFAMILY SSF51905 2 358 1.94E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4971 d3de1abad313664ac0965191e510a697 384 Gene3D G3DSA:3.50.50.60 2 347 1.4E-64 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4971 d3de1abad313664ac0965191e510a697 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 305 1.8E-18 T 14-10-2018 Amir_4971 d3de1abad313664ac0965191e510a697 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 274 289 1.8E-18 T 14-10-2018 Amir_4971 d3de1abad313664ac0965191e510a697 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 137 152 1.8E-18 T 14-10-2018 Amir_4971 d3de1abad313664ac0965191e510a697 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.8E-18 T 14-10-2018 Amir_5061 b91a872cf6c2b719fcf73a3539245b5c 236 SMART SM00345 13 71 9.7E-23 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5061 b91a872cf6c2b719fcf73a3539245b5c 236 SMART SM00895 81 203 1.3E-11 T 14-10-2018 IPR011711 GntR, C-terminal Amir_5061 b91a872cf6c2b719fcf73a3539245b5c 236 Gene3D G3DSA:1.10.10.10 6 72 1.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5061 b91a872cf6c2b719fcf73a3539245b5c 236 Pfam PF07729 FCD domain 85 202 6.0E-16 T 14-10-2018 IPR011711 GntR, C-terminal Amir_5061 b91a872cf6c2b719fcf73a3539245b5c 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.4E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5061 b91a872cf6c2b719fcf73a3539245b5c 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.4E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5061 b91a872cf6c2b719fcf73a3539245b5c 236 SUPERFAMILY SSF46785 8 75 3.8E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5061 b91a872cf6c2b719fcf73a3539245b5c 236 SUPERFAMILY SSF48008 77 208 1.99E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_5061 b91a872cf6c2b719fcf73a3539245b5c 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 1.9E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5061 b91a872cf6c2b719fcf73a3539245b5c 236 Gene3D G3DSA:1.20.120.530 77 215 7.7E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_5962 e6728e975939c6ba66e5d677c18875db 291 Gene3D G3DSA:1.10.8.50 142 282 9.6E-42 T 14-10-2018 Amir_5962 e6728e975939c6ba66e5d677c18875db 291 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 280 1.3E-89 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Amir_5962 e6728e975939c6ba66e5d677c18875db 291 SUPERFAMILY SSF81624 2 149 5.49E-36 T 14-10-2018 IPR035937 MutM-like, N-terminal Amir_5962 e6728e975939c6ba66e5d677c18875db 291 Pfam PF06827 Zinc finger found in FPG and IleRS 255 282 1.4E-7 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Amir_5962 e6728e975939c6ba66e5d677c18875db 291 SMART SM00898 2 121 2.5E-49 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Amir_5962 e6728e975939c6ba66e5d677c18875db 291 SUPERFAMILY SSF57716 232 281 2.2E-15 T 14-10-2018 Amir_5962 e6728e975939c6ba66e5d677c18875db 291 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 281 39.737 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Amir_5962 e6728e975939c6ba66e5d677c18875db 291 SUPERFAMILY SSF46946 140 229 3.53E-26 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Amir_5962 e6728e975939c6ba66e5d677c18875db 291 SMART SM01232 140 232 1.7E-39 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Amir_5962 e6728e975939c6ba66e5d677c18875db 291 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 140 226 1.3E-22 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Amir_5962 e6728e975939c6ba66e5d677c18875db 291 Gene3D G3DSA:3.20.190.10 2 130 8.5E-38 T 14-10-2018 IPR035937 MutM-like, N-terminal Amir_5962 e6728e975939c6ba66e5d677c18875db 291 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 119 1.5E-34 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Amir_4960 ecb99bb384ee1d70b17eb50a54ec1a7b 384 Pfam PF01757 Acyltransferase family 46 366 5.3E-21 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Amir_0255 601472e3821fb1fac33c4b57741c671a 257 ProSitePatterns PS01155 Endonuclease III family signature. 117 146 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Amir_0255 601472e3821fb1fac33c4b57741c671a 257 TIGRFAM TIGR01083 nth: endonuclease III 21 209 2.0E-77 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Amir_0255 601472e3821fb1fac33c4b57741c671a 257 SUPERFAMILY SSF48150 22 221 4.55E-64 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Amir_0255 601472e3821fb1fac33c4b57741c671a 257 SMART SM00525 201 221 6.0E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Amir_0255 601472e3821fb1fac33c4b57741c671a 257 Hamap MF_00942 Endonuclease III [nth]. 11 224 36.379 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Amir_0255 601472e3821fb1fac33c4b57741c671a 257 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 49 179 1.8E-22 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Amir_0255 601472e3821fb1fac33c4b57741c671a 257 PIRSF PIRSF001435 17 226 1.1E-46 T 14-10-2018 Amir_0255 601472e3821fb1fac33c4b57741c671a 257 Gene3D G3DSA:1.10.1670.10 32 218 3.0E-72 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Amir_0255 601472e3821fb1fac33c4b57741c671a 257 Pfam PF00633 Helix-hairpin-helix motif 114 141 2.6E-8 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Amir_0255 601472e3821fb1fac33c4b57741c671a 257 SMART SM00478 53 200 4.0E-57 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Amir_0255 601472e3821fb1fac33c4b57741c671a 257 Gene3D G3DSA:1.10.340.30 36 147 3.0E-72 T 14-10-2018 Amir_6738 548b6e935f6556d81838e02c3dc68721 294 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 43 232 1.4E-16 T 14-10-2018 Amir_6738 548b6e935f6556d81838e02c3dc68721 294 Gene3D G3DSA:1.20.1440.100 55 131 2.1E-60 T 14-10-2018 Amir_6738 548b6e935f6556d81838e02c3dc68721 294 Pfam PF12710 haloacid dehalogenase-like hydrolase 44 230 7.2E-26 T 14-10-2018 Amir_6738 548b6e935f6556d81838e02c3dc68721 294 Gene3D G3DSA:3.40.50.1000 44 255 2.1E-60 T 14-10-2018 IPR023214 HAD superfamily Amir_6738 548b6e935f6556d81838e02c3dc68721 294 SUPERFAMILY SSF56784 43 262 6.64E-29 T 14-10-2018 IPR036412 HAD-like superfamily Amir_6738 548b6e935f6556d81838e02c3dc68721 294 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 43 244 1.6E-54 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Amir_2619 258925655807ac699fdbdc29ca91b4dd 101 Pfam PF12840 Helix-turn-helix domain 7 73 4.8E-17 T 14-10-2018 Amir_2619 258925655807ac699fdbdc29ca91b4dd 101 Gene3D G3DSA:1.10.10.10 3 92 1.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2619 258925655807ac699fdbdc29ca91b4dd 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 3.5E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_2619 258925655807ac699fdbdc29ca91b4dd 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 3.5E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_2619 258925655807ac699fdbdc29ca91b4dd 101 SUPERFAMILY SSF46785 7 89 2.73E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2619 258925655807ac699fdbdc29ca91b4dd 101 SMART SM00418 8 93 1.2E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_2208 5b8b9669da9f30af39256e75f56029b1 134 Pfam PF00072 Response regulator receiver domain 7 109 1.0E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2208 5b8b9669da9f30af39256e75f56029b1 134 SUPERFAMILY SSF52172 1 120 4.55E-28 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2208 5b8b9669da9f30af39256e75f56029b1 134 SMART SM00448 4 113 7.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2208 5b8b9669da9f30af39256e75f56029b1 134 Gene3D G3DSA:3.40.50.2300 1 125 1.4E-25 T 14-10-2018 Amir_4481 2bf53ee43c26eb6633584fee678bbf12 391 Gene3D G3DSA:1.20.1250.20 211 388 9.7E-15 T 14-10-2018 Amir_4481 2bf53ee43c26eb6633584fee678bbf12 391 SUPERFAMILY SSF103473 15 389 7.46E-34 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4481 2bf53ee43c26eb6633584fee678bbf12 391 Gene3D G3DSA:1.20.1250.20 14 194 3.9E-12 T 14-10-2018 Amir_4481 2bf53ee43c26eb6633584fee678bbf12 391 Pfam PF07690 Major Facilitator Superfamily 27 291 1.6E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2272 542200169b0722db3ba802c12cb30545 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 1.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2272 542200169b0722db3ba802c12cb30545 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 1.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2272 542200169b0722db3ba802c12cb30545 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 125 145 1.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2272 542200169b0722db3ba802c12cb30545 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 1.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2272 542200169b0722db3ba802c12cb30545 166 Gene3D G3DSA:1.10.10.10 6 158 6.4E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2272 542200169b0722db3ba802c12cb30545 166 SUPERFAMILY SSF46785 6 146 1.1E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2272 542200169b0722db3ba802c12cb30545 166 SMART SM00347 32 135 8.1E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2272 542200169b0722db3ba802c12cb30545 166 Pfam PF12802 MarR family 37 98 5.7E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_6248 3c5cc17e299ed931e929bfd50efd49c0 368 Gene3D G3DSA:3.40.50.720 3 352 2.0E-135 T 14-10-2018 Amir_6248 3c5cc17e299ed931e929bfd50efd49c0 368 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 137 3.2E-45 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Amir_6248 3c5cc17e299ed931e929bfd50efd49c0 368 SMART SM01002 149 297 2.8E-84 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Amir_6248 3c5cc17e299ed931e929bfd50efd49c0 368 Gene3D G3DSA:3.40.50.720 130 305 2.0E-135 T 14-10-2018 Amir_6248 3c5cc17e299ed931e929bfd50efd49c0 368 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 2.3E-80 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Amir_6248 3c5cc17e299ed931e929bfd50efd49c0 368 SMART SM01003 4 137 1.1E-74 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Amir_6248 3c5cc17e299ed931e929bfd50efd49c0 368 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 Amir_6248 3c5cc17e299ed931e929bfd50efd49c0 368 SUPERFAMILY SSF51735 137 303 3.21E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6248 3c5cc17e299ed931e929bfd50efd49c0 368 PIRSF PIRSF000183 1 366 1.9E-156 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 Amir_6248 3c5cc17e299ed931e929bfd50efd49c0 368 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 2 357 2.8E-164 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 Amir_6248 3c5cc17e299ed931e929bfd50efd49c0 368 SUPERFAMILY SSF52283 2 357 2.21E-63 T 14-10-2018 Amir_0412 b0e0c947276f45d0a2fe44f94c2eeb68 272 SUPERFAMILY SSF53335 12 223 3.38E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_0412 b0e0c947276f45d0a2fe44f94c2eeb68 272 Gene3D G3DSA:3.40.50.150 3 226 5.4E-42 T 14-10-2018 Amir_0412 b0e0c947276f45d0a2fe44f94c2eeb68 272 PIRSF PIRSF028177 1 272 3.6E-64 T 14-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 Amir_0412 b0e0c947276f45d0a2fe44f94c2eeb68 272 Pfam PF04072 Leucine carboxyl methyltransferase 60 172 2.7E-13 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 Amir_2441 0eb57bbebb561129a2c3dfd9e1c4d39e 275 SUPERFAMILY SSF47413 30 80 1.81E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2441 0eb57bbebb561129a2c3dfd9e1c4d39e 275 Gene3D G3DSA:1.10.260.40 3 92 2.9E-8 T 14-10-2018 Amir_2441 0eb57bbebb561129a2c3dfd9e1c4d39e 275 Pfam PF13560 Helix-turn-helix domain 5 84 1.0E-17 T 14-10-2018 Amir_2441 0eb57bbebb561129a2c3dfd9e1c4d39e 275 SMART SM00530 9 81 3.2E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_2441 0eb57bbebb561129a2c3dfd9e1c4d39e 275 Gene3D G3DSA:3.30.450.180 103 261 5.3E-11 T 14-10-2018 Amir_2753 9d55c79a2e029b9e364841aeb9ccc591 301 SUPERFAMILY SSF46689 27 89 2.69E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2753 9d55c79a2e029b9e364841aeb9ccc591 301 Gene3D G3DSA:1.10.10.10 22 92 1.8E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2753 9d55c79a2e029b9e364841aeb9ccc591 301 Pfam PF01380 SIS domain 143 273 1.0E-12 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Amir_2753 9d55c79a2e029b9e364841aeb9ccc591 301 Gene3D G3DSA:3.40.50.10490 114 293 1.7E-28 T 14-10-2018 Amir_2753 9d55c79a2e029b9e364841aeb9ccc591 301 Pfam PF01418 Helix-turn-helix domain, rpiR family 32 85 2.9E-7 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Amir_2753 9d55c79a2e029b9e364841aeb9ccc591 301 SUPERFAMILY SSF53697 123 270 2.43E-19 T 14-10-2018 Amir_5720 ed17869ee6cc870eaa0eecc965b5bbc8 200 SUPERFAMILY SSF54211 3 87 2.15E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_5720 ed17869ee6cc870eaa0eecc965b5bbc8 200 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Amir_5720 ed17869ee6cc870eaa0eecc965b5bbc8 200 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 161 173 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Amir_5720 ed17869ee6cc870eaa0eecc965b5bbc8 200 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 179 4.5E-57 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Amir_5720 ed17869ee6cc870eaa0eecc965b5bbc8 200 Gene3D G3DSA:3.30.230.40 1 90 2.4E-34 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Amir_5720 ed17869ee6cc870eaa0eecc965b5bbc8 200 SUPERFAMILY SSF54211 88 184 8.89E-29 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_5720 ed17869ee6cc870eaa0eecc965b5bbc8 200 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 200 40.421 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Amir_5720 ed17869ee6cc870eaa0eecc965b5bbc8 200 Gene3D G3DSA:3.30.230.40 91 200 2.5E-35 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Amir_6561 25216ba87f2020dd463d4db64cb6cdc5 962 SUPERFAMILY SSF140453 183 263 2.49E-5 T 14-10-2018 IPR036689 ESAT-6-like superfamily Amir_3768 51a42c830850a34685ab1800870b3eb0 209 SUPERFAMILY SSF56281 22 198 2.98E-45 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_3768 51a42c830850a34685ab1800870b3eb0 209 SMART SM00849 24 188 2.1E-37 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_3768 51a42c830850a34685ab1800870b3eb0 209 Pfam PF00753 Metallo-beta-lactamase superfamily 25 188 1.2E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_3768 51a42c830850a34685ab1800870b3eb0 209 Gene3D G3DSA:3.60.15.10 19 204 1.4E-50 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_3118 5d0e529c9fb4f996b1a25f0a3abf8ca9 289 SUPERFAMILY SSF51735 5 253 1.77E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3118 5d0e529c9fb4f996b1a25f0a3abf8ca9 289 Pfam PF05368 NmrA-like family 5 222 1.8E-21 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 Amir_3118 5d0e529c9fb4f996b1a25f0a3abf8ca9 289 Gene3D G3DSA:3.40.50.720 3 288 1.3E-40 T 14-10-2018 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 Gene3D G3DSA:3.50.50.60 145 265 3.0E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 342 450 3.4E-35 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 SUPERFAMILY SSF55424 338 460 5.67E-38 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 SUPERFAMILY SSF51905 2 331 2.7E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 1.5E-35 T 14-10-2018 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 1.5E-35 T 14-10-2018 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 274 1.5E-35 T 14-10-2018 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.5E-35 T 14-10-2018 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 1.5E-35 T 14-10-2018 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 Gene3D G3DSA:3.50.50.60 5 327 3.0E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 460 2.2E-167 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 322 7.4E-69 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 1.1E-63 T 14-10-2018 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 1.1E-63 T 14-10-2018 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 1.1E-63 T 14-10-2018 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 1.1E-63 T 14-10-2018 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 136 145 1.1E-63 T 14-10-2018 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 338 359 1.1E-63 T 14-10-2018 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 259 273 1.1E-63 T 14-10-2018 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.1E-63 T 14-10-2018 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.1E-63 T 14-10-2018 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 PIRSF PIRSF000350 1 457 2.8E-82 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Amir_6148 4cd4af13611f75296a2b5f61b1942af2 461 Gene3D G3DSA:3.30.390.30 341 461 4.4E-45 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amir_6834 4593188c333129a222dbba697d0b7496 285 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 4 282 2.9E-78 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Amir_6834 4593188c333129a222dbba697d0b7496 285 SMART SM00797 25 285 5.4E-89 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Amir_6834 4593188c333129a222dbba697d0b7496 285 Gene3D G3DSA:2.40.100.10 169 285 4.3E-40 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Amir_6834 4593188c333129a222dbba697d0b7496 285 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 26 282 3.8E-79 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Amir_6834 4593188c333129a222dbba697d0b7496 285 SUPERFAMILY SSF50891 171 282 2.35E-13 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Amir_3916 2db4e9f58b2707a2455412c08ad1f2e1 376 Gene3D G3DSA:3.40.50.1980 187 354 6.6E-33 T 14-10-2018 Amir_3916 2db4e9f58b2707a2455412c08ad1f2e1 376 SUPERFAMILY SSF53807 55 352 4.71E-36 T 14-10-2018 Amir_3916 2db4e9f58b2707a2455412c08ad1f2e1 376 Pfam PF01497 Periplasmic binding protein 82 303 7.4E-16 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Amir_3916 2db4e9f58b2707a2455412c08ad1f2e1 376 Gene3D G3DSA:3.40.50.1980 46 179 1.1E-18 T 14-10-2018 Amir_3941 e51086f95bccd87d8350d583632653cf 113 SMART SM00418 9 83 1.7E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3941 e51086f95bccd87d8350d583632653cf 113 Gene3D G3DSA:1.10.10.10 1 110 1.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3941 e51086f95bccd87d8350d583632653cf 113 SUPERFAMILY SSF46785 6 100 7.49E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3941 e51086f95bccd87d8350d583632653cf 113 Pfam PF12840 Helix-turn-helix domain 9 66 1.2E-14 T 14-10-2018 Amir_3941 e51086f95bccd87d8350d583632653cf 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 3.4E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3941 e51086f95bccd87d8350d583632653cf 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 3.4E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3941 e51086f95bccd87d8350d583632653cf 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 3.4E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3467 abc0ea93a0e9adf93d55085f3f892f0e 275 Gene3D G3DSA:3.40.50.10780 2 214 4.3E-82 T 14-10-2018 IPR027476 D-aminopeptidase, N-terminal Amir_3467 abc0ea93a0e9adf93d55085f3f892f0e 275 PIRSF PIRSF015853 1 272 3.2E-87 T 14-10-2018 IPR007035 Peptidase M55, D-aminopeptidase Amir_3467 abc0ea93a0e9adf93d55085f3f892f0e 275 Gene3D G3DSA:3.30.1360.130 118 259 4.3E-82 T 14-10-2018 Amir_3467 abc0ea93a0e9adf93d55085f3f892f0e 275 Pfam PF04951 D-aminopeptidase 2 260 8.6E-89 T 14-10-2018 IPR007035 Peptidase M55, D-aminopeptidase Amir_3467 abc0ea93a0e9adf93d55085f3f892f0e 275 SUPERFAMILY SSF63992 2 267 2.88E-80 T 14-10-2018 IPR036177 Peptidase M55, D-aminopeptidase superfamily Amir_6891 c666bcc1a60340b2daab02c1884f7d1b 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.6E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6891 c666bcc1a60340b2daab02c1884f7d1b 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.6E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6891 c666bcc1a60340b2daab02c1884f7d1b 196 Gene3D G3DSA:1.10.357.10 5 195 4.8E-40 T 14-10-2018 Amir_6891 c666bcc1a60340b2daab02c1884f7d1b 196 SUPERFAMILY SSF46689 8 79 1.03E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_6891 c666bcc1a60340b2daab02c1884f7d1b 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 9.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5171 77c1505f0606a262f6e525cbed6881ea 147 SMART SM00960 13 103 7.6E-28 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain Amir_5171 77c1505f0606a262f6e525cbed6881ea 147 SUPERFAMILY SSF103196 7 130 8.55E-33 T 14-10-2018 Amir_5171 77c1505f0606a262f6e525cbed6881ea 147 Pfam PF03259 Roadblock/LC7 domain 14 103 1.3E-20 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain Amir_5171 77c1505f0606a262f6e525cbed6881ea 147 Gene3D G3DSA:3.30.450.30 9 134 1.5E-40 T 14-10-2018 Amir_5880 1453eae98b19da0fc003a4b76e946cf7 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5880 1453eae98b19da0fc003a4b76e946cf7 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5880 1453eae98b19da0fc003a4b76e946cf7 223 SUPERFAMILY SSF46785 6 87 3.55E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5880 1453eae98b19da0fc003a4b76e946cf7 223 Gene3D G3DSA:1.10.10.10 6 82 2.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5880 1453eae98b19da0fc003a4b76e946cf7 223 SMART SM00345 15 74 8.0E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5880 1453eae98b19da0fc003a4b76e946cf7 223 Pfam PF07729 FCD domain 94 207 3.4E-20 T 14-10-2018 IPR011711 GntR, C-terminal Amir_5880 1453eae98b19da0fc003a4b76e946cf7 223 SMART SM00895 94 216 9.4E-17 T 14-10-2018 IPR011711 GntR, C-terminal Amir_5880 1453eae98b19da0fc003a4b76e946cf7 223 SUPERFAMILY SSF48008 90 217 3.66E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_5880 1453eae98b19da0fc003a4b76e946cf7 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.0E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5880 1453eae98b19da0fc003a4b76e946cf7 223 Gene3D G3DSA:1.20.120.530 88 217 5.1E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_1887 58f36cfcd8e831c91e0bed4128cf4fc6 363 Gene3D G3DSA:3.40.50.300 61 240 9.1E-23 T 14-10-2018 Amir_1887 58f36cfcd8e831c91e0bed4128cf4fc6 363 SUPERFAMILY SSF52540 61 296 3.5E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1887 58f36cfcd8e831c91e0bed4128cf4fc6 363 Pfam PF07728 AAA domain (dynein-related subfamily) 81 222 3.6E-32 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Amir_1887 58f36cfcd8e831c91e0bed4128cf4fc6 363 SMART SM00382 77 232 0.0024 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1478 a8ab1b6597b102bbab16c778a354df1d 142 SUPERFAMILY SSF55729 4 134 3.14E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_1478 a8ab1b6597b102bbab16c778a354df1d 142 Gene3D G3DSA:3.40.630.30 2 139 3.6E-28 T 14-10-2018 Amir_1478 a8ab1b6597b102bbab16c778a354df1d 142 Pfam PF00583 Acetyltransferase (GNAT) family 58 130 3.4E-11 T 14-10-2018 IPR000182 GNAT domain Amir_7080 ea6d7772e06b18b9e03eff31272727c3 174 PRINTS PR00502 NUDIX hydrolase family signature 58 72 1.9E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_7080 ea6d7772e06b18b9e03eff31272727c3 174 PRINTS PR00502 NUDIX hydrolase family signature 72 87 1.9E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_7080 ea6d7772e06b18b9e03eff31272727c3 174 Gene3D G3DSA:3.90.79.10 22 165 9.6E-35 T 14-10-2018 Amir_7080 ea6d7772e06b18b9e03eff31272727c3 174 Pfam PF00293 NUDIX domain 41 155 1.3E-21 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_7080 ea6d7772e06b18b9e03eff31272727c3 174 ProSitePatterns PS00893 Nudix box signature. 63 84 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_7080 ea6d7772e06b18b9e03eff31272727c3 174 SUPERFAMILY SSF55811 31 161 1.49E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_3465 54b6a6675102b70c90f27afcc08d70d5 319 Gene3D G3DSA:1.10.3720.10 87 313 1.4E-19 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3465 54b6a6675102b70c90f27afcc08d70d5 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 317 3.0E-37 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_3465 54b6a6675102b70c90f27afcc08d70d5 319 SUPERFAMILY SSF161098 93 305 1.36E-14 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3307 4961d50d72a42b8d7806a54d19fc06e1 174 Gene3D G3DSA:3.40.50.850 1 173 5.6E-47 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Amir_3307 4961d50d72a42b8d7806a54d19fc06e1 174 Pfam PF00857 Isochorismatase family 6 167 3.2E-32 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Amir_3307 4961d50d72a42b8d7806a54d19fc06e1 174 SUPERFAMILY SSF52499 2 170 1.7E-42 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Amir_1066 f350944e034a00f2b21f63f5fb97feef 560 Gene3D G3DSA:3.30.300.310 465 560 9.2E-29 T 14-10-2018 Amir_1066 f350944e034a00f2b21f63f5fb97feef 560 Pfam PF00501 AMP-binding enzyme 49 469 2.6E-63 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_1066 f350944e034a00f2b21f63f5fb97feef 560 SUPERFAMILY SSF56801 46 558 3.01E-109 T 14-10-2018 Amir_1066 f350944e034a00f2b21f63f5fb97feef 560 Gene3D G3DSA:3.40.50.980 40 164 1.1E-24 T 14-10-2018 Amir_1066 f350944e034a00f2b21f63f5fb97feef 560 Pfam PF13193 AMP-binding enzyme C-terminal domain 479 552 6.7E-20 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_1066 f350944e034a00f2b21f63f5fb97feef 560 Gene3D G3DSA:3.40.50.12780 172 460 1.3E-50 T 14-10-2018 Amir_4928 202e255b9d28b9aa34b6b3ffb467665b 571 Gene3D G3DSA:1.10.3720.10 371 571 5.9E-8 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4928 202e255b9d28b9aa34b6b3ffb467665b 571 Gene3D G3DSA:1.10.3720.10 83 302 3.2E-7 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4928 202e255b9d28b9aa34b6b3ffb467665b 571 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 142 300 3.8E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_4928 202e255b9d28b9aa34b6b3ffb467665b 571 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 404 561 3.8E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_4928 202e255b9d28b9aa34b6b3ffb467665b 571 SUPERFAMILY SSF161098 94 294 2.35E-5 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4928 202e255b9d28b9aa34b6b3ffb467665b 571 SUPERFAMILY SSF161098 378 555 1.73E-11 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3404 00d92e6e36d765bbdb2c00ca94f88a7f 174 Pfam PF00293 NUDIX domain 7 150 2.2E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_3404 00d92e6e36d765bbdb2c00ca94f88a7f 174 PRINTS PR00502 NUDIX hydrolase family signature 56 71 1.2E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_3404 00d92e6e36d765bbdb2c00ca94f88a7f 174 PRINTS PR00502 NUDIX hydrolase family signature 42 56 1.2E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_3404 00d92e6e36d765bbdb2c00ca94f88a7f 174 SUPERFAMILY SSF55811 6 143 1.35E-20 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_3404 00d92e6e36d765bbdb2c00ca94f88a7f 174 Gene3D G3DSA:3.90.79.10 5 152 1.2E-21 T 14-10-2018 Amir_3404 00d92e6e36d765bbdb2c00ca94f88a7f 174 ProSitePatterns PS00893 Nudix box signature. 47 68 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_4108 710e257bacdde6e95621cca754e8dbf9 189 SUPERFAMILY SSF46689 7 86 1.75E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4108 710e257bacdde6e95621cca754e8dbf9 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 64 1.9E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4108 710e257bacdde6e95621cca754e8dbf9 189 Gene3D G3DSA:1.10.357.10 2 189 6.0E-45 T 14-10-2018 Amir_4108 710e257bacdde6e95621cca754e8dbf9 189 SUPERFAMILY SSF48498 83 188 9.49E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4108 710e257bacdde6e95621cca754e8dbf9 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4108 710e257bacdde6e95621cca754e8dbf9 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 1.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3494 3cf3b3cda4c5e7aa176eb7a7bb474f7c 344 PIRSF PIRSF016838 1 52 3.6E-4 T 14-10-2018 IPR028349 Protein PafC Amir_3494 3cf3b3cda4c5e7aa176eb7a7bb474f7c 344 PIRSF PIRSF016838 93 323 2.0E-9 T 14-10-2018 IPR028349 Protein PafC Amir_3494 3cf3b3cda4c5e7aa176eb7a7bb474f7c 344 Pfam PF13280 WYL domain 144 314 1.1E-25 T 14-10-2018 IPR026881 WYL domain Amir_3494 3cf3b3cda4c5e7aa176eb7a7bb474f7c 344 Gene3D G3DSA:1.10.10.10 1 62 9.2E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3494 3cf3b3cda4c5e7aa176eb7a7bb474f7c 344 SUPERFAMILY SSF46785 3 56 1.28E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3494 3cf3b3cda4c5e7aa176eb7a7bb474f7c 344 Pfam PF08279 HTH domain 10 58 1.5E-13 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Amir_3212 a7f505e17f25ec44fa3ebac2be28cee4 250 Pfam PF00775 Dioxygenase 55 156 3.2E-11 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 Amir_3212 a7f505e17f25ec44fa3ebac2be28cee4 250 Gene3D G3DSA:2.60.130.10 12 206 6.8E-40 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Amir_3212 a7f505e17f25ec44fa3ebac2be28cee4 250 SUPERFAMILY SSF49482 22 215 8.9E-42 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Amir_0237 2bca31fdf73bb1710a62946519703a21 374 Pfam PF02374 Anion-transporting ATPase 16 285 4.6E-24 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Amir_0237 2bca31fdf73bb1710a62946519703a21 374 SUPERFAMILY SSF52540 12 310 1.13E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6156 bb0cf9915cdd2e316df1278282f83cd2 437 Pfam PF00742 Homoserine dehydrogenase 142 324 8.3E-66 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Amir_6156 bb0cf9915cdd2e316df1278282f83cd2 437 Gene3D G3DSA:3.40.50.720 12 343 1.2E-146 T 14-10-2018 Amir_6156 bb0cf9915cdd2e316df1278282f83cd2 437 SUPERFAMILY SSF51735 9 163 2.18E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6156 bb0cf9915cdd2e316df1278282f83cd2 437 PIRSF PIRSF000098 9 435 6.0E-158 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Amir_6156 bb0cf9915cdd2e316df1278282f83cd2 437 SUPERFAMILY SSF55021 354 427 5.35E-13 T 14-10-2018 Amir_6156 bb0cf9915cdd2e316df1278282f83cd2 437 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 188 210 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Amir_6156 bb0cf9915cdd2e316df1278282f83cd2 437 Pfam PF01842 ACT domain 359 415 7.5E-11 T 14-10-2018 IPR002912 ACT domain Amir_6156 bb0cf9915cdd2e316df1278282f83cd2 437 Gene3D G3DSA:3.30.70.260 352 423 1.2E-146 T 14-10-2018 Amir_6156 bb0cf9915cdd2e316df1278282f83cd2 437 Gene3D G3DSA:3.30.360.10 141 351 1.2E-146 T 14-10-2018 Amir_6156 bb0cf9915cdd2e316df1278282f83cd2 437 SUPERFAMILY SSF55347 142 311 1.24E-50 T 14-10-2018 Amir_6156 bb0cf9915cdd2e316df1278282f83cd2 437 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 18 134 7.7E-26 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Amir_4678 ee3ff2f7f29f83e43ad96147674904db 215 Gene3D G3DSA:3.90.1720.10 5 194 8.7E-10 T 14-10-2018 Amir_4678 ee3ff2f7f29f83e43ad96147674904db 215 SUPERFAMILY SSF54001 15 200 9.81E-26 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amir_2367 12dcf3a88f67525dafe007406862d28e 759 SUPERFAMILY SSF55874 591 744 6.94E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2367 12dcf3a88f67525dafe007406862d28e 759 SMART SM00091 345 412 160.0 T 14-10-2018 IPR000014 PAS domain Amir_2367 12dcf3a88f67525dafe007406862d28e 759 SMART SM00091 200 266 1.4E-5 T 14-10-2018 IPR000014 PAS domain Amir_2367 12dcf3a88f67525dafe007406862d28e 759 Pfam PF00512 His Kinase A (phospho-acceptor) domain 477 587 3.0E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2367 12dcf3a88f67525dafe007406862d28e 759 Gene3D G3DSA:3.30.565.10 588 749 2.6E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2367 12dcf3a88f67525dafe007406862d28e 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 674 688 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2367 12dcf3a88f67525dafe007406862d28e 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 705 723 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2367 12dcf3a88f67525dafe007406862d28e 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 692 702 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2367 12dcf3a88f67525dafe007406862d28e 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 730 743 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_2367 12dcf3a88f67525dafe007406862d28e 759 SUPERFAMILY SSF47384 470 512 9.22E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_2367 12dcf3a88f67525dafe007406862d28e 759 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 197 326 3.8E-13 T 14-10-2018 IPR000014 PAS domain Amir_2367 12dcf3a88f67525dafe007406862d28e 759 SUPERFAMILY SSF55785 336 460 2.44E-10 T 14-10-2018 IPR035965 PAS domain superfamily Amir_2367 12dcf3a88f67525dafe007406862d28e 759 SUPERFAMILY SSF55785 211 326 1.92E-17 T 14-10-2018 IPR035965 PAS domain superfamily Amir_2367 12dcf3a88f67525dafe007406862d28e 759 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 630 745 4.5E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2367 12dcf3a88f67525dafe007406862d28e 759 Gene3D G3DSA:3.30.450.20 196 333 5.0E-21 T 14-10-2018 Amir_2367 12dcf3a88f67525dafe007406862d28e 759 Gene3D G3DSA:3.30.450.20 334 471 1.6E-12 T 14-10-2018 Amir_2367 12dcf3a88f67525dafe007406862d28e 759 SMART SM00387 628 746 8.0E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2367 12dcf3a88f67525dafe007406862d28e 759 Pfam PF08448 PAS fold 352 461 1.0E-10 T 14-10-2018 IPR013656 PAS fold-4 Amir_2367 12dcf3a88f67525dafe007406862d28e 759 Pfam PF13426 PAS domain 211 317 1.4E-9 T 14-10-2018 IPR000014 PAS domain Amir_5019 415ac1bfc3ee2e4f2594fe68e6032e86 307 Gene3D G3DSA:3.40.1010.20 100 196 1.1E-105 T 14-10-2018 Amir_5019 415ac1bfc3ee2e4f2594fe68e6032e86 307 Pfam PF02401 LytB protein 6 282 2.7E-87 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Amir_5019 415ac1bfc3ee2e4f2594fe68e6032e86 307 Gene3D G3DSA:3.40.1010.20 10 281 1.1E-105 T 14-10-2018 Amir_5019 415ac1bfc3ee2e4f2594fe68e6032e86 307 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 283 8.3E-94 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Amir_5019 415ac1bfc3ee2e4f2594fe68e6032e86 307 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 4 286 36.274 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Amir_5019 415ac1bfc3ee2e4f2594fe68e6032e86 307 Gene3D G3DSA:3.40.50.11270 15 99 1.1E-105 T 14-10-2018 Amir_1219 f85c3da354035083ec50fb5561462baa 143 SUPERFAMILY SSF109604 5 134 6.28E-24 T 14-10-2018 Amir_1219 f85c3da354035083ec50fb5561462baa 143 Gene3D G3DSA:1.10.3210.10 2 143 2.7E-22 T 14-10-2018 Amir_1219 f85c3da354035083ec50fb5561462baa 143 Pfam PF13328 HD domain 8 109 5.1E-8 T 14-10-2018 IPR003607 HD/PDEase domain Amir_0538 7e100bb13c115550bc0913ae44858f9e 399 SUPERFAMILY SSF51556 58 360 7.53E-69 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_0538 7e100bb13c115550bc0913ae44858f9e 399 Pfam PF07969 Amidohydrolase family 46 391 2.0E-21 T 14-10-2018 IPR013108 Amidohydrolase 3 Amir_0538 7e100bb13c115550bc0913ae44858f9e 399 Gene3D G3DSA:3.20.20.140 58 351 4.9E-103 T 14-10-2018 Amir_0538 7e100bb13c115550bc0913ae44858f9e 399 SUPERFAMILY SSF51338 4 70 1.19E-8 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_0538 7e100bb13c115550bc0913ae44858f9e 399 Gene3D G3DSA:2.30.40.10 4 391 4.9E-103 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_1032 0b0b78e3b0df84bcdfe7ed43c1d950ee 344 Pfam PF00107 Zinc-binding dehydrogenase 178 305 4.8E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_1032 0b0b78e3b0df84bcdfe7ed43c1d950ee 344 Pfam PF13823 Alcohol dehydrogenase GroES-associated 7 23 1.1E-6 T 14-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated Amir_1032 0b0b78e3b0df84bcdfe7ed43c1d950ee 344 Gene3D G3DSA:3.40.50.720 158 306 2.4E-94 T 14-10-2018 Amir_1032 0b0b78e3b0df84bcdfe7ed43c1d950ee 344 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amir_1032 0b0b78e3b0df84bcdfe7ed43c1d950ee 344 SUPERFAMILY SSF50129 2 168 2.2E-45 T 14-10-2018 IPR011032 GroES-like superfamily Amir_1032 0b0b78e3b0df84bcdfe7ed43c1d950ee 344 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 127 1.7E-24 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_1032 0b0b78e3b0df84bcdfe7ed43c1d950ee 344 Gene3D G3DSA:3.90.180.10 4 333 2.4E-94 T 14-10-2018 Amir_1032 0b0b78e3b0df84bcdfe7ed43c1d950ee 344 SUPERFAMILY SSF51735 148 311 1.28E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1032 0b0b78e3b0df84bcdfe7ed43c1d950ee 344 SMART SM00829 8 342 0.0029 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_0193 852fa1ad76c11706944020d3a8b2f3c9 101 TIGRFAM TIGR04186 GRASP_targ: putative ATP-grasp target RiPP 37 99 1.3E-15 T 14-10-2018 IPR026496 Putative ATP-grasp target RiPP Amir_0193 852fa1ad76c11706944020d3a8b2f3c9 101 Pfam PF14408 Ribosomally synthesised peptide in actinomycetes 47 97 2.5E-14 T 14-10-2018 IPR025843 Ribosomally synthesized peptide in Actinomycetes Amir_1309 a0c822520230bef49bba154d21390361 124 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 16 111 2.5E-17 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Amir_1309 a0c822520230bef49bba154d21390361 124 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 14 114 15.902 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Amir_0500 7c7fa51ad369cd1f278619b8b2221e64 533 Gene3D G3DSA:2.70.98.10 279 512 3.3E-53 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Amir_0500 7c7fa51ad369cd1f278619b8b2221e64 533 SUPERFAMILY SSF74650 280 512 3.19E-51 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Amir_0500 7c7fa51ad369cd1f278619b8b2221e64 533 Gene3D G3DSA:1.50.10.100 23 267 1.6E-55 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Amir_0500 7c7fa51ad369cd1f278619b8b2221e64 533 SUPERFAMILY SSF48230 25 290 1.96E-51 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Amir_0500 7c7fa51ad369cd1f278619b8b2221e64 533 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 63 258 5.3E-24 T 14-10-2018 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical Amir_0500 7c7fa51ad369cd1f278619b8b2221e64 533 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 283 442 4.6E-43 T 14-10-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 Amir_4904 24f6352800b16da83ca8c2511fd6f711 259 Gene3D G3DSA:3.40.50.300 4 255 3.9E-74 T 14-10-2018 Amir_4904 24f6352800b16da83ca8c2511fd6f711 259 SMART SM00382 29 215 8.2E-22 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4904 24f6352800b16da83ca8c2511fd6f711 259 Pfam PF00005 ABC transporter 21 169 4.5E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4904 24f6352800b16da83ca8c2511fd6f711 259 SUPERFAMILY SSF52540 4 229 4.15E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4904 24f6352800b16da83ca8c2511fd6f711 259 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_4726 393a2f2251f413f9db21d1c071c7f808 389 Gene3D G3DSA:3.50.50.60 1 367 2.9E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4726 393a2f2251f413f9db21d1c071c7f808 389 Pfam PF01266 FAD dependent oxidoreductase 1 357 2.0E-64 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Amir_4726 393a2f2251f413f9db21d1c071c7f808 389 SUPERFAMILY SSF51905 1 379 2.07E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4726 393a2f2251f413f9db21d1c071c7f808 389 SUPERFAMILY SSF54373 219 321 1.16E-9 T 14-10-2018 Amir_4726 393a2f2251f413f9db21d1c071c7f808 389 Gene3D G3DSA:3.30.9.10 85 323 2.9E-89 T 14-10-2018 Amir_5182 977336bbfb9bd9efc0ab281b143fe89f 212 SUPERFAMILY SSF109604 10 129 1.34E-18 T 14-10-2018 Amir_5182 977336bbfb9bd9efc0ab281b143fe89f 212 Gene3D G3DSA:1.10.3210.10 5 137 2.7E-14 T 14-10-2018 Amir_6198 5870b6eec934c3b3a39e5c0ba6c60566 250 Gene3D G3DSA:3.90.25.10 115 235 9.8E-41 T 14-10-2018 Amir_6198 5870b6eec934c3b3a39e5c0ba6c60566 250 SUPERFAMILY SSF51735 2 244 9.23E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6198 5870b6eec934c3b3a39e5c0ba6c60566 250 Gene3D G3DSA:3.40.50.720 3 233 9.8E-41 T 14-10-2018 Amir_4413 f9bfff3ead7a3109b680c68a618d126a 147 SUPERFAMILY SSF46785 13 136 2.91E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4413 f9bfff3ead7a3109b680c68a618d126a 147 Gene3D G3DSA:1.10.10.10 9 81 5.1E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4413 f9bfff3ead7a3109b680c68a618d126a 147 Gene3D G3DSA:3.30.1490.190 89 142 2.3E-14 T 14-10-2018 Amir_4413 f9bfff3ead7a3109b680c68a618d126a 147 Pfam PF01475 Ferric uptake regulator family 13 129 1.1E-15 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Amir_0688 64ff1881b165fac85ff19fb32b0227e1 441 Gene3D G3DSA:3.50.50.100 2 410 1.1E-112 T 14-10-2018 Amir_0688 64ff1881b165fac85ff19fb32b0227e1 441 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 337 4.6E-47 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_0688 64ff1881b165fac85ff19fb32b0227e1 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.5E-10 T 14-10-2018 Amir_0688 64ff1881b165fac85ff19fb32b0227e1 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.5E-10 T 14-10-2018 Amir_0688 64ff1881b165fac85ff19fb32b0227e1 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 289 311 1.5E-10 T 14-10-2018 Amir_0688 64ff1881b165fac85ff19fb32b0227e1 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 1.5E-10 T 14-10-2018 Amir_0688 64ff1881b165fac85ff19fb32b0227e1 441 SUPERFAMILY SSF51905 6 346 1.58E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6368 40ccd7c1992fd3f60d4a3a8761c9cf47 396 SUPERFAMILY SSF56059 106 304 3.71E-58 T 14-10-2018 Amir_6368 40ccd7c1992fd3f60d4a3a8761c9cf47 396 Gene3D G3DSA:3.40.50.20 6 115 2.8E-29 T 14-10-2018 Amir_6368 40ccd7c1992fd3f60d4a3a8761c9cf47 396 Pfam PF02222 ATP-grasp domain 115 283 9.8E-52 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Amir_6368 40ccd7c1992fd3f60d4a3a8761c9cf47 396 SUPERFAMILY SSF51246 310 388 2.43E-17 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Amir_6368 40ccd7c1992fd3f60d4a3a8761c9cf47 396 SUPERFAMILY SSF52440 8 102 2.45E-23 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amir_6368 40ccd7c1992fd3f60d4a3a8761c9cf47 396 Gene3D G3DSA:3.30.470.20 187 391 1.5E-70 T 14-10-2018 Amir_6368 40ccd7c1992fd3f60d4a3a8761c9cf47 396 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 9 366 39.615 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Amir_6368 40ccd7c1992fd3f60d4a3a8761c9cf47 396 Gene3D G3DSA:3.30.1490.20 117 186 5.9E-17 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amir_6368 40ccd7c1992fd3f60d4a3a8761c9cf47 396 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 10 371 5.7E-121 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Amir_4139 9bb00a7fcebc1476691d56efec31c4d6 621 SUPERFAMILY SSF52309 435 620 3.36E-27 T 14-10-2018 Amir_4985 cb3cf9a41accb6d2bf0eebe31f06f160 687 SUPERFAMILY SSF52540 26 289 2.06E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4985 cb3cf9a41accb6d2bf0eebe31f06f160 687 Pfam PF00931 NB-ARC domain 55 297 1.5E-5 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 Amir_4985 cb3cf9a41accb6d2bf0eebe31f06f160 687 PRINTS PR00364 Disease resistance protein signature 58 73 3.9E-6 T 14-10-2018 Amir_4985 cb3cf9a41accb6d2bf0eebe31f06f160 687 PRINTS PR00364 Disease resistance protein signature 136 150 3.9E-6 T 14-10-2018 Amir_4985 cb3cf9a41accb6d2bf0eebe31f06f160 687 PRINTS PR00364 Disease resistance protein signature 222 236 3.9E-6 T 14-10-2018 Amir_4985 cb3cf9a41accb6d2bf0eebe31f06f160 687 Gene3D G3DSA:1.25.40.10 475 678 5.2E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4985 cb3cf9a41accb6d2bf0eebe31f06f160 687 SUPERFAMILY SSF48452 474 663 3.2E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4985 cb3cf9a41accb6d2bf0eebe31f06f160 687 Pfam PF13424 Tetratricopeptide repeat 556 624 4.3E-10 T 14-10-2018 Amir_4985 cb3cf9a41accb6d2bf0eebe31f06f160 687 SMART SM00028 634 667 32.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_4985 cb3cf9a41accb6d2bf0eebe31f06f160 687 SMART SM00028 554 587 5.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_4985 cb3cf9a41accb6d2bf0eebe31f06f160 687 SMART SM00028 594 627 41.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_4985 cb3cf9a41accb6d2bf0eebe31f06f160 687 Gene3D G3DSA:3.40.50.300 19 180 3.7E-20 T 14-10-2018 Amir_4907 7739b9598137e1f6d5fb69b2b6568450 318 Gene3D G3DSA:3.40.50.1980 169 317 1.5E-18 T 14-10-2018 Amir_4907 7739b9598137e1f6d5fb69b2b6568450 318 SUPERFAMILY SSF53807 37 299 1.18E-37 T 14-10-2018 Amir_4907 7739b9598137e1f6d5fb69b2b6568450 318 Gene3D G3DSA:3.40.50.1980 33 168 8.8E-22 T 14-10-2018 Amir_4907 7739b9598137e1f6d5fb69b2b6568450 318 Pfam PF01497 Periplasmic binding protein 108 295 6.3E-22 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Amir_3523 783503855b5b14ee906c929b84e020a4 349 SUPERFAMILY SSF51679 5 329 1.05E-69 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_3523 783503855b5b14ee906c929b84e020a4 349 TIGRFAM TIGR03559 F420_Rv3520c: probable F420-dependent oxidoreductase, Rv3520c family 2 322 8.7E-120 T 14-10-2018 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c Amir_3523 783503855b5b14ee906c929b84e020a4 349 Gene3D G3DSA:3.20.20.30 10 340 7.4E-83 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_3523 783503855b5b14ee906c929b84e020a4 349 Pfam PF00296 Luciferase-like monooxygenase 17 317 6.1E-83 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_5804 165c8b13706eb5acc415074c9e0ddcb9 853 Gene3D G3DSA:1.10.10.10 764 828 2.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5804 165c8b13706eb5acc415074c9e0ddcb9 853 SMART SM00843 768 832 1.0E-28 T 14-10-2018 IPR018541 FtsK gamma domain Amir_5804 165c8b13706eb5acc415074c9e0ddcb9 853 Pfam PF01580 FtsK/SpoIIIE family 467 667 9.8E-62 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Amir_5804 165c8b13706eb5acc415074c9e0ddcb9 853 Gene3D G3DSA:3.30.980.40 361 463 2.8E-29 T 14-10-2018 Amir_5804 165c8b13706eb5acc415074c9e0ddcb9 853 Gene3D G3DSA:3.40.50.300 464 753 4.0E-103 T 14-10-2018 Amir_5804 165c8b13706eb5acc415074c9e0ddcb9 853 Pfam PF09397 Ftsk gamma domain 772 829 2.0E-21 T 14-10-2018 IPR018541 FtsK gamma domain Amir_5804 165c8b13706eb5acc415074c9e0ddcb9 853 SUPERFAMILY SSF46785 769 833 1.13E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5804 165c8b13706eb5acc415074c9e0ddcb9 853 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 111 232 6.0E-7 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region Amir_5804 165c8b13706eb5acc415074c9e0ddcb9 853 SUPERFAMILY SSF52540 441 739 1.26E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 Pfam PF00141 Peroxidase 410 716 2.6E-38 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 Pfam PF00141 Peroxidase 94 403 2.4E-49 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 PRINTS PR00458 Haem peroxidase superfamily signature 160 177 1.9E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 PRINTS PR00458 Haem peroxidase superfamily signature 100 114 1.9E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 PRINTS PR00458 Haem peroxidase superfamily signature 324 339 1.9E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 PRINTS PR00458 Haem peroxidase superfamily signature 264 279 1.9E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 PRINTS PR00458 Haem peroxidase superfamily signature 178 190 1.9E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 Gene3D G3DSA:1.10.420.10 596 717 5.9E-140 T 14-10-2018 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 264 274 - T 14-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 SUPERFAMILY SSF48113 438 741 7.96E-107 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 272 295 3.5E-44 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 488 514 3.5E-44 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 77 102 3.5E-44 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 62 75 3.5E-44 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 36 58 3.5E-44 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 32 742 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 ProSitePatterns PS00436 Peroxidases active site signature. 100 111 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 Hamap MF_01961 Catalase-peroxidase [katG]. 15 742 41.777 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 SUPERFAMILY SSF48113 28 437 2.95E-154 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 Gene3D G3DSA:1.10.520.10 32 438 1.1E-215 T 14-10-2018 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 Gene3D G3DSA:1.10.420.20 201 405 1.1E-215 T 14-10-2018 Amir_4193 a76ab7fbc782307b0663157d7f1ddacb 742 Gene3D G3DSA:1.10.520.10 441 741 5.9E-140 T 14-10-2018 Amir_5854 fa2633f3f8fe1567e3f950016987347d 405 Gene3D G3DSA:3.40.1010.10 162 277 1.2E-35 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amir_5854 fa2633f3f8fe1567e3f950016987347d 405 PIRSF PIRSF036426 146 404 1.6E-87 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Amir_5854 fa2633f3f8fe1567e3f950016987347d 405 PIRSF PIRSF036426 4 160 3.1E-32 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Amir_5854 fa2633f3f8fe1567e3f950016987347d 405 Pfam PF13241 Putative NAD(P)-binding 11 118 5.2E-24 T 14-10-2018 Amir_5854 fa2633f3f8fe1567e3f950016987347d 405 SUPERFAMILY SSF51735 6 108 4.72E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5854 fa2633f3f8fe1567e3f950016987347d 405 Gene3D G3DSA:3.40.50.720 7 133 3.0E-31 T 14-10-2018 Amir_5854 fa2633f3f8fe1567e3f950016987347d 405 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 12 134 7.3E-21 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Amir_5854 fa2633f3f8fe1567e3f950016987347d 405 Gene3D G3DSA:3.30.950.10 278 404 3.8E-43 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Amir_5854 fa2633f3f8fe1567e3f950016987347d 405 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 164 374 1.2E-47 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Amir_5854 fa2633f3f8fe1567e3f950016987347d 405 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 164 397 5.1E-77 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Amir_5854 fa2633f3f8fe1567e3f950016987347d 405 SUPERFAMILY SSF53790 162 398 1.19E-68 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amir_4266 008b4297823a13055f2a6fb38c08f3e8 971 Pfam PF13569 Domain of unknown function (DUF4132) 741 888 6.4E-40 T 14-10-2018 IPR025406 Domain of unknown function DUF4132 Amir_6486 d23b6eda99736caf56b5d8c4d2b7534f 265 Pfam PF06182 ABC-2 family transporter protein 36 264 5.1E-54 T 14-10-2018 IPR010390 Protein of unknown function DUF990 Amir_6599 351cd9895637fc908bc5dbe54b3bbc40 179 SUPERFAMILY SSF56053 1 83 7.07E-26 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6599 351cd9895637fc908bc5dbe54b3bbc40 179 Gene3D G3DSA:3.90.930.12 84 179 4.5E-40 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6599 351cd9895637fc908bc5dbe54b3bbc40 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6599 351cd9895637fc908bc5dbe54b3bbc40 179 PRINTS PR00059 Ribosomal protein L6 signature 142 163 1.3E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Amir_6599 351cd9895637fc908bc5dbe54b3bbc40 179 PRINTS PR00059 Ribosomal protein L6 signature 72 97 1.3E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Amir_6599 351cd9895637fc908bc5dbe54b3bbc40 179 PRINTS PR00059 Ribosomal protein L6 signature 100 116 1.3E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Amir_6599 351cd9895637fc908bc5dbe54b3bbc40 179 Pfam PF00347 Ribosomal protein L6 11 83 1.7E-18 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6599 351cd9895637fc908bc5dbe54b3bbc40 179 Pfam PF00347 Ribosomal protein L6 92 165 6.7E-20 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6599 351cd9895637fc908bc5dbe54b3bbc40 179 Gene3D G3DSA:3.90.930.12 1 83 3.4E-31 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6599 351cd9895637fc908bc5dbe54b3bbc40 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 8.0E-74 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Amir_6599 351cd9895637fc908bc5dbe54b3bbc40 179 PIRSF PIRSF002162 1 178 4.5E-47 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6599 351cd9895637fc908bc5dbe54b3bbc40 179 SUPERFAMILY SSF56053 84 178 1.3E-34 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6599 351cd9895637fc908bc5dbe54b3bbc40 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 38.551 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Amir_3574 b2702b67e8e94570d0719013032e0843 206 Gene3D G3DSA:1.10.10.10 95 206 1.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3574 b2702b67e8e94570d0719013032e0843 206 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 200 1.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3574 b2702b67e8e94570d0719013032e0843 206 SMART SM00421 143 200 2.8E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3574 b2702b67e8e94570d0719013032e0843 206 SUPERFAMILY SSF46894 141 206 5.44E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_3574 b2702b67e8e94570d0719013032e0843 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 1.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3574 b2702b67e8e94570d0719013032e0843 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 1.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3574 b2702b67e8e94570d0719013032e0843 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 1.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1807 b8ead39e29009344189f712e30b4d418 402 Gene3D G3DSA:3.40.190.10 24 401 5.9E-75 T 14-10-2018 Amir_1807 b8ead39e29009344189f712e30b4d418 402 Pfam PF01547 Bacterial extracellular solute-binding protein 41 313 1.7E-34 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_1807 b8ead39e29009344189f712e30b4d418 402 SUPERFAMILY SSF53850 16 398 7.41E-70 T 14-10-2018 Amir_2779 e867fd9c7a9c77787e9d24e02633a67a 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 5.6E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2779 e867fd9c7a9c77787e9d24e02633a67a 185 Gene3D G3DSA:1.10.357.10 3 182 6.1E-55 T 14-10-2018 Amir_2779 e867fd9c7a9c77787e9d24e02633a67a 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 8.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2779 e867fd9c7a9c77787e9d24e02633a67a 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 8.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2779 e867fd9c7a9c77787e9d24e02633a67a 185 SUPERFAMILY SSF46689 3 82 8.48E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2779 e867fd9c7a9c77787e9d24e02633a67a 185 SUPERFAMILY SSF48498 85 180 2.05E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_0293 31ae5e52b00ef3da24c4c4c32c6290d3 710 Hamap MF_00165 Thymidylate kinase [tmk]. 481 696 15.283 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Amir_0293 31ae5e52b00ef3da24c4c4c32c6290d3 710 Gene3D G3DSA:3.40.50.300 477 697 1.1E-28 T 14-10-2018 Amir_0293 31ae5e52b00ef3da24c4c4c32c6290d3 710 Pfam PF05977 Transmembrane secretion effector 34 398 7.9E-18 T 14-10-2018 IPR010290 Transmembrane secretion effector Amir_0293 31ae5e52b00ef3da24c4c4c32c6290d3 710 Pfam PF02223 Thymidylate kinase 494 612 6.4E-12 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Amir_0293 31ae5e52b00ef3da24c4c4c32c6290d3 710 Gene3D G3DSA:1.20.1250.20 36 458 2.0E-31 T 14-10-2018 Amir_0293 31ae5e52b00ef3da24c4c4c32c6290d3 710 SUPERFAMILY SSF52540 479 614 3.33E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0293 31ae5e52b00ef3da24c4c4c32c6290d3 710 SUPERFAMILY SSF103473 39 459 1.44E-35 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2144 30cfe5b91768356e64d9526fc4cf229d 214 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 213 31.718 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 Amir_2144 30cfe5b91768356e64d9526fc4cf229d 214 SUPERFAMILY SSF53335 3 187 5.66E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_2144 30cfe5b91768356e64d9526fc4cf229d 214 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 213 1.1E-45 T 14-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 Amir_2144 30cfe5b91768356e64d9526fc4cf229d 214 Gene3D G3DSA:3.40.50.150 1 214 8.2E-49 T 14-10-2018 Amir_6805 e336278c274b9352ec773eee016ae3b0 668 Gene3D G3DSA:3.30.479.30 66 183 2.0E-8 T 14-10-2018 Amir_6805 e336278c274b9352ec773eee016ae3b0 668 SUPERFAMILY SSF117892 57 200 1.44E-9 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily Amir_2834 4faa284d6804cbfeaddeecf051a8954a 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 261 2.9E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_2834 4faa284d6804cbfeaddeecf051a8954a 275 Gene3D G3DSA:1.10.3720.10 15 262 3.2E-55 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2834 4faa284d6804cbfeaddeecf051a8954a 275 SUPERFAMILY SSF161098 14 275 6.64E-65 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3997 e7aa8dab53bcf6f4a2e56bf90011d1aa 293 SUPERFAMILY SSF52200 3 125 2.75E-7 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily Amir_3997 e7aa8dab53bcf6f4a2e56bf90011d1aa 293 Gene3D G3DSA:3.40.50.10140 3 146 2.4E-8 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily Amir_3997 e7aa8dab53bcf6f4a2e56bf90011d1aa 293 Pfam PF13676 TIR domain 4 122 9.3E-10 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 Amir_4138 be4d76a8a3cc80314cae39645f600332 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 174 241 4.6E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4138 be4d76a8a3cc80314cae39645f600332 245 Pfam PF00072 Response regulator receiver domain 23 129 1.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4138 be4d76a8a3cc80314cae39645f600332 245 SUPERFAMILY SSF52172 17 139 9.82E-37 T 14-10-2018 IPR011006 CheY-like superfamily Amir_4138 be4d76a8a3cc80314cae39645f600332 245 SMART SM00862 170 241 1.1E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4138 be4d76a8a3cc80314cae39645f600332 245 Gene3D G3DSA:3.40.50.2300 11 137 3.5E-33 T 14-10-2018 Amir_4138 be4d76a8a3cc80314cae39645f600332 245 SMART SM00448 21 128 1.0E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4138 be4d76a8a3cc80314cae39645f600332 245 SUPERFAMILY SSF46894 145 242 3.4E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4138 be4d76a8a3cc80314cae39645f600332 245 Gene3D G3DSA:1.10.10.10 141 242 3.8E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0556 068d4ec61e593187e9b2a793dcace8d0 602 SUPERFAMILY SSF52540 20 234 1.25E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0556 068d4ec61e593187e9b2a793dcace8d0 602 Pfam PF00350 Dynamin family 42 201 2.6E-15 T 14-10-2018 IPR022812 Dynamin superfamily Amir_0556 068d4ec61e593187e9b2a793dcace8d0 602 Gene3D G3DSA:3.40.50.300 42 273 9.3E-26 T 14-10-2018 Amir_1779 b6b15864d380df986df9fc3ed2934f61 250 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 76 109 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Amir_1779 b6b15864d380df986df9fc3ed2934f61 250 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 208 7.4E-43 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Amir_1779 b6b15864d380df986df9fc3ed2934f61 250 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 242 7.2E-87 T 14-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 Amir_1779 b6b15864d380df986df9fc3ed2934f61 250 Gene3D G3DSA:3.40.1010.10 1 110 1.6E-29 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amir_1779 b6b15864d380df986df9fc3ed2934f61 250 SUPERFAMILY SSF53790 2 231 1.44E-63 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amir_1779 b6b15864d380df986df9fc3ed2934f61 250 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Amir_1779 b6b15864d380df986df9fc3ed2934f61 250 Gene3D G3DSA:3.30.950.10 111 231 3.5E-42 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Amir_3687 e6211605aff31c30f8c8a91e022b0b58 96 SUPERFAMILY SSF46785 2 79 6.95E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3687 e6211605aff31c30f8c8a91e022b0b58 96 Pfam PF01638 HxlR-like helix-turn-helix 6 80 4.0E-22 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type Amir_3687 e6211605aff31c30f8c8a91e022b0b58 96 Gene3D G3DSA:1.10.10.10 1 85 1.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5070 1453e63ab038fcb0d7eb72da9e7484f8 353 SUPERFAMILY SSF55846 144 344 3.96E-35 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amir_5070 1453e63ab038fcb0d7eb72da9e7484f8 353 SMART SM00701 141 314 3.6E-8 T 14-10-2018 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amir_5070 1453e63ab038fcb0d7eb72da9e7484f8 353 SMART SM00644 160 332 0.0038 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amir_5070 1453e63ab038fcb0d7eb72da9e7484f8 353 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 171 332 9.3E-18 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amir_5070 1453e63ab038fcb0d7eb72da9e7484f8 353 Gene3D G3DSA:3.40.80.10 133 349 1.4E-48 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amir_4075 52b508c52fea4fef80a5b68128fabd98 400 Gene3D G3DSA:3.40.640.10 28 282 9.6E-113 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_4075 52b508c52fea4fef80a5b68128fabd98 400 Pfam PF00266 Aminotransferase class-V 22 390 1.3E-53 T 14-10-2018 IPR000192 Aminotransferase class V domain Amir_4075 52b508c52fea4fef80a5b68128fabd98 400 Gene3D G3DSA:3.90.1150.10 19 393 9.6E-113 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_4075 52b508c52fea4fef80a5b68128fabd98 400 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 393 4.5E-127 T 14-10-2018 IPR011340 Cysteine desulfurase-related Amir_4075 52b508c52fea4fef80a5b68128fabd98 400 SUPERFAMILY SSF53383 3 397 2.02E-77 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_1530 efe77d5eeb55da34a764466227939aa8 123 SUPERFAMILY SSF101386 14 118 1.93E-33 T 14-10-2018 Amir_1530 efe77d5eeb55da34a764466227939aa8 123 Pfam PF12643 MazG-like family 45 115 1.8E-8 T 14-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 Amir_1530 efe77d5eeb55da34a764466227939aa8 123 PIRSF PIRSF029826 7 121 2.1E-39 T 14-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 Amir_1530 efe77d5eeb55da34a764466227939aa8 123 Gene3D G3DSA:1.10.287.1080 6 119 1.0E-34 T 14-10-2018 Amir_7042 8f704145f347c101e49f218a36c93f8b 151 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 6.6E-24 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal Amir_7042 8f704145f347c101e49f218a36c93f8b 151 Gene3D G3DSA:3.40.5.10 1 59 4.6E-22 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7042 8f704145f347c101e49f218a36c93f8b 151 SUPERFAMILY SSF55653 58 147 4.45E-21 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Amir_7042 8f704145f347c101e49f218a36c93f8b 151 SUPERFAMILY SSF55658 1 57 8.37E-18 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Amir_7042 8f704145f347c101e49f218a36c93f8b 151 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 7.2E-21 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7042 8f704145f347c101e49f218a36c93f8b 151 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7042 8f704145f347c101e49f218a36c93f8b 151 Gene3D G3DSA:3.10.430.100 61 149 1.0E-22 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Amir_7042 8f704145f347c101e49f218a36c93f8b 151 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 4.5E-35 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_7042 8f704145f347c101e49f218a36c93f8b 151 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 150 24.883 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_3568 87eb8155f1d16f7791b86d1c528e4e25 402 Gene3D G3DSA:3.40.630.30 1 133 4.1E-39 T 14-10-2018 Amir_3568 87eb8155f1d16f7791b86d1c528e4e25 402 Gene3D G3DSA:3.40.630.30 134 287 1.0E-36 T 14-10-2018 Amir_3568 87eb8155f1d16f7791b86d1c528e4e25 402 SUPERFAMILY SSF55729 4 297 1.78E-63 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_3568 87eb8155f1d16f7791b86d1c528e4e25 402 Hamap MF_01812 N-acetyltransferase Eis [eis]. 4 402 32.651 T 14-10-2018 IPR022902 N-acetyltransferase Eis Amir_3568 87eb8155f1d16f7791b86d1c528e4e25 402 Pfam PF13530 Sterol carrier protein domain 183 398 3.3E-53 T 14-10-2018 IPR025559 Enhanced intracellular survival protein domain Amir_3568 87eb8155f1d16f7791b86d1c528e4e25 402 Gene3D G3DSA:3.30.1050.10 296 392 3.4E-32 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Amir_3568 87eb8155f1d16f7791b86d1c528e4e25 402 Pfam PF13527 Acetyltransferase (GNAT) domain 3 130 6.2E-28 T 14-10-2018 Amir_3568 87eb8155f1d16f7791b86d1c528e4e25 402 SUPERFAMILY SSF55718 298 402 7.46E-24 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Amir_2242 869505f364f7d73893267b2c176a76d1 263 SUPERFAMILY SSF56235 10 234 3.66E-44 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_2242 869505f364f7d73893267b2c176a76d1 263 Hamap MF_00289_B Proteasome subunit alpha [prcA]. 1 236 49.399 T 14-10-2018 IPR022296 Proteasome, alpha subunit, bacterial GO:0004298|GO:0019773|GO:0051603 Amir_2242 869505f364f7d73893267b2c176a76d1 263 TIGRFAM TIGR03691 20S_bact_alpha: proteasome, alpha subunit 2 233 1.2E-109 T 14-10-2018 IPR022296 Proteasome, alpha subunit, bacterial GO:0004298|GO:0019773|GO:0051603 Amir_2242 869505f364f7d73893267b2c176a76d1 263 Gene3D G3DSA:3.60.20.10 1 246 3.9E-71 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_2242 869505f364f7d73893267b2c176a76d1 263 Pfam PF00227 Proteasome subunit 25 191 3.2E-30 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Amir_3188 6ada16413f42f8183550c3a66bd7eb4f 430 SUPERFAMILY SSF56784 16 119 9.3E-11 T 14-10-2018 IPR036412 HAD-like superfamily Amir_3188 6ada16413f42f8183550c3a66bd7eb4f 430 Gene3D G3DSA:3.40.630.30 191 331 2.5E-5 T 14-10-2018 Amir_3188 6ada16413f42f8183550c3a66bd7eb4f 430 Gene3D G3DSA:3.40.50.1000 15 161 6.7E-33 T 14-10-2018 IPR023214 HAD superfamily Amir_3188 6ada16413f42f8183550c3a66bd7eb4f 430 TIGRFAM TIGR01686 FkbH: FkbH domain 16 324 2.2E-94 T 14-10-2018 IPR010037 FkbH domain Amir_3188 6ada16413f42f8183550c3a66bd7eb4f 430 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 17 126 1.2E-12 T 14-10-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC Amir_3188 6ada16413f42f8183550c3a66bd7eb4f 430 SUPERFAMILY SSF55729 192 300 1.32E-6 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_2181 a6d412910c7870223786b9df8e0a3272 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 251 1.3E-69 T 14-10-2018 Amir_2181 a6d412910c7870223786b9df8e0a3272 255 SUPERFAMILY SSF51735 6 252 2.37E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2181 a6d412910c7870223786b9df8e0a3272 255 Gene3D G3DSA:3.40.50.720 2 252 3.8E-51 T 14-10-2018 Amir_2181 a6d412910c7870223786b9df8e0a3272 255 PIRSF PIRSF000094 2 255 8.2E-89 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Amir_4152 2715d8f7b1c3f7ee67e348756a06fb19 449 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 148 157 - T 14-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 Amir_4152 2715d8f7b1c3f7ee67e348756a06fb19 449 SMART SM00637 353 446 2.9E-39 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_4152 2715d8f7b1c3f7ee67e348756a06fb19 449 SUPERFAMILY SSF49384 348 444 9.77E-30 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_4152 2715d8f7b1c3f7ee67e348756a06fb19 449 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 41 284 1.4E-28 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 Amir_4152 2715d8f7b1c3f7ee67e348756a06fb19 449 SUPERFAMILY SSF51445 32 322 1.4E-67 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_4152 2715d8f7b1c3f7ee67e348756a06fb19 449 Gene3D G3DSA:3.20.20.80 20 324 3.4E-84 T 14-10-2018 Amir_4152 2715d8f7b1c3f7ee67e348756a06fb19 449 Gene3D G3DSA:2.60.40.290 348 448 5.6E-29 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_4152 2715d8f7b1c3f7ee67e348756a06fb19 449 Pfam PF00553 Cellulose binding domain 353 443 2.5E-25 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_6073 56ac0e38132cb7ddd1d2d656635bdd1d 604 Gene3D G3DSA:2.60.40.1180 508 602 1.5E-32 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_6073 56ac0e38132cb7ddd1d2d656635bdd1d 604 Gene3D G3DSA:3.20.20.80 50 502 2.9E-225 T 14-10-2018 Amir_6073 56ac0e38132cb7ddd1d2d656635bdd1d 604 SUPERFAMILY SSF51011 513 593 1.04E-15 T 14-10-2018 Amir_6073 56ac0e38132cb7ddd1d2d656635bdd1d 604 SUPERFAMILY SSF51445 49 505 2.3E-130 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_6073 56ac0e38132cb7ddd1d2d656635bdd1d 604 Pfam PF00128 Alpha amylase, catalytic domain 73 429 2.4E-73 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_6073 56ac0e38132cb7ddd1d2d656635bdd1d 604 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 50 593 4.0E-287 T 14-10-2018 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622|MetaCyc: PWY-7900 Amir_6073 56ac0e38132cb7ddd1d2d656635bdd1d 604 Pfam PF16657 Maltogenic Amylase, C-terminal domain 508 590 8.5E-20 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal Amir_6073 56ac0e38132cb7ddd1d2d656635bdd1d 604 SMART SM00642 58 460 1.0E-113 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_6073 56ac0e38132cb7ddd1d2d656635bdd1d 604 Gene3D G3DSA:3.90.400.10 148 217 2.9E-225 T 14-10-2018 Amir_2852 879ae6fcd9f9b902531d475273a3e608 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 266 1.5E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_2852 879ae6fcd9f9b902531d475273a3e608 279 SUPERFAMILY SSF161098 5 266 2.06E-43 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2852 879ae6fcd9f9b902531d475273a3e608 279 Gene3D G3DSA:1.10.3720.10 7 273 2.4E-47 T 14-10-2018 IPR035906 MetI-like superfamily Amir_5696 84bca01642806cee8efbecfd89f71437 455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 303 2.9E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_5696 84bca01642806cee8efbecfd89f71437 455 Gene3D G3DSA:3.30.565.10 305 450 7.4E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5696 84bca01642806cee8efbecfd89f71437 455 SUPERFAMILY SSF158472 185 231 6.54E-8 T 14-10-2018 Amir_5696 84bca01642806cee8efbecfd89f71437 455 SUPERFAMILY SSF47384 222 303 3.53E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_5696 84bca01642806cee8efbecfd89f71437 455 SMART SM00304 185 238 1.3E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5696 84bca01642806cee8efbecfd89f71437 455 Pfam PF00672 HAMP domain 185 231 7.2E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5696 84bca01642806cee8efbecfd89f71437 455 SUPERFAMILY SSF55874 309 449 1.7E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5696 84bca01642806cee8efbecfd89f71437 455 Gene3D G3DSA:1.10.287.130 189 304 2.0E-26 T 14-10-2018 Amir_5696 84bca01642806cee8efbecfd89f71437 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 1.0E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5696 84bca01642806cee8efbecfd89f71437 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 1.0E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_5696 84bca01642806cee8efbecfd89f71437 455 SMART SM00388 239 304 3.2E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_5696 84bca01642806cee8efbecfd89f71437 455 SMART SM00387 344 453 1.2E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5696 84bca01642806cee8efbecfd89f71437 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 450 2.2E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_1664 b38c16cae53b72d3f0b5d353525a8a4a 696 Gene3D G3DSA:3.40.50.410 73 282 1.3E-13 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_1664 b38c16cae53b72d3f0b5d353525a8a4a 696 Pfam PF00801 PKD domain 459 529 1.9E-5 T 14-10-2018 IPR000601 PKD domain Amir_1664 b38c16cae53b72d3f0b5d353525a8a4a 696 Gene3D G3DSA:2.60.40.10 448 540 6.0E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_1664 b38c16cae53b72d3f0b5d353525a8a4a 696 SUPERFAMILY SSF53300 75 281 6.67E-10 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_1664 b38c16cae53b72d3f0b5d353525a8a4a 696 SUPERFAMILY SSF49299 414 530 3.27E-11 T 14-10-2018 IPR035986 PKD domain superfamily Amir_5936 734b9e30df1eb0c8029c6528c8e2a857 331 TIGRFAM TIGR02961 allantoicase: allantoicase 9 312 1.0E-114 T 14-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 Amir_5936 734b9e30df1eb0c8029c6528c8e2a857 331 Gene3D G3DSA:2.60.120.260 175 313 3.8E-41 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5936 734b9e30df1eb0c8029c6528c8e2a857 331 Hamap MF_00813 Probable allantoicase [alc]. 1 315 42.997 T 14-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 Amir_5936 734b9e30df1eb0c8029c6528c8e2a857 331 Pfam PF03561 Allantoicase repeat 185 312 7.7E-34 T 14-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 Amir_5936 734b9e30df1eb0c8029c6528c8e2a857 331 Pfam PF03561 Allantoicase repeat 18 163 3.6E-42 T 14-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 Amir_5936 734b9e30df1eb0c8029c6528c8e2a857 331 SUPERFAMILY SSF49785 175 314 5.95E-41 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5936 734b9e30df1eb0c8029c6528c8e2a857 331 SUPERFAMILY SSF49785 6 167 4.08E-49 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5936 734b9e30df1eb0c8029c6528c8e2a857 331 Gene3D G3DSA:2.60.120.260 2 168 4.4E-54 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5936 734b9e30df1eb0c8029c6528c8e2a857 331 PIRSF PIRSF016516 2 266 2.7E-83 T 14-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 Amir_5936 734b9e30df1eb0c8029c6528c8e2a857 331 PIRSF PIRSF016516 259 329 1.1E-10 T 14-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 Amir_4191 b9bc799d0718954165ccbbaa33282c2e 538 SMART SM00304 282 338 110.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_4191 b9bc799d0718954165ccbbaa33282c2e 538 SMART SM00304 222 275 3.9E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_4191 b9bc799d0718954165ccbbaa33282c2e 538 SUPERFAMILY SSF58104 243 536 5.89E-57 T 14-10-2018 Amir_4191 b9bc799d0718954165ccbbaa33282c2e 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 8 33 5.6E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_4191 b9bc799d0718954165ccbbaa33282c2e 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 408 5.6E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_4191 b9bc799d0718954165ccbbaa33282c2e 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 458 487 5.6E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_4191 b9bc799d0718954165ccbbaa33282c2e 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 410 439 5.6E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_4191 b9bc799d0718954165ccbbaa33282c2e 538 Gene3D G3DSA:1.10.287.950 221 538 1.9E-59 T 14-10-2018 Amir_4191 b9bc799d0718954165ccbbaa33282c2e 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 342 504 1.4E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_4191 b9bc799d0718954165ccbbaa33282c2e 538 SMART SM00283 283 537 4.5E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_4046 3579349fdd9038076412ea3143f651c4 596 SUPERFAMILY SSF90123 28 347 5.76E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_4046 3579349fdd9038076412ea3143f651c4 596 SUPERFAMILY SSF52540 353 591 7.24E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4046 3579349fdd9038076412ea3143f651c4 596 SMART SM00382 385 573 3.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4046 3579349fdd9038076412ea3143f651c4 596 Gene3D G3DSA:1.20.1560.10 15 346 1.7E-40 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_4046 3579349fdd9038076412ea3143f651c4 596 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_4046 3579349fdd9038076412ea3143f651c4 596 Pfam PF00005 ABC transporter 376 521 5.0E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4046 3579349fdd9038076412ea3143f651c4 596 Gene3D G3DSA:3.40.50.300 354 596 3.5E-78 T 14-10-2018 Amir_4046 3579349fdd9038076412ea3143f651c4 596 Pfam PF00664 ABC transporter transmembrane region 95 254 2.8E-20 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_3388 e25173a894ee9a6b7fec7436a2303d79 193 Gene3D G3DSA:3.40.50.360 1 192 7.5E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Amir_3388 e25173a894ee9a6b7fec7436a2303d79 193 Pfam PF02525 Flavodoxin-like fold 2 183 2.9E-45 T 14-10-2018 IPR003680 Flavodoxin-like fold Amir_3388 e25173a894ee9a6b7fec7436a2303d79 193 SUPERFAMILY SSF52218 2 188 1.09E-43 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Amir_5926 34804ac1e47322a6294564e04aee8e29 145 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 23.181 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5926 34804ac1e47322a6294564e04aee8e29 145 SUPERFAMILY SSF54565 2 95 1.7E-32 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5926 34804ac1e47322a6294564e04aee8e29 145 Gene3D G3DSA:3.30.1320.10 1 108 7.5E-30 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5926 34804ac1e47322a6294564e04aee8e29 145 Pfam PF00886 Ribosomal protein S16 9 67 7.7E-23 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5926 34804ac1e47322a6294564e04aee8e29 145 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 3.9E-30 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0258 41cfad42cca5dfa4cd50eac8c13febb7 395 PRINTS PR00834 HtrA/DegQ protease family signature 325 342 3.0E-8 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_0258 41cfad42cca5dfa4cd50eac8c13febb7 395 PRINTS PR00834 HtrA/DegQ protease family signature 245 265 3.0E-8 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_0258 41cfad42cca5dfa4cd50eac8c13febb7 395 PRINTS PR00834 HtrA/DegQ protease family signature 225 237 3.0E-8 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_0258 41cfad42cca5dfa4cd50eac8c13febb7 395 PRINTS PR00834 HtrA/DegQ protease family signature 284 308 3.0E-8 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_0258 41cfad42cca5dfa4cd50eac8c13febb7 395 Gene3D G3DSA:2.40.10.10 185 275 1.7E-21 T 14-10-2018 Amir_0258 41cfad42cca5dfa4cd50eac8c13febb7 395 Pfam PF13365 Trypsin-like peptidase domain 217 354 6.9E-23 T 14-10-2018 Amir_0258 41cfad42cca5dfa4cd50eac8c13febb7 395 Gene3D G3DSA:2.40.10.10 276 381 9.1E-20 T 14-10-2018 Amir_0258 41cfad42cca5dfa4cd50eac8c13febb7 395 Pfam PF02674 Colicin V production protein 4 146 3.2E-14 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 Amir_0258 41cfad42cca5dfa4cd50eac8c13febb7 395 SUPERFAMILY SSF50494 191 375 3.21E-35 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_5816 d2306839ba999dea7d7367a389e7736d 332 Gene3D G3DSA:3.20.20.100 2 331 1.5E-105 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_5816 d2306839ba999dea7d7367a389e7736d 332 Pfam PF00248 Aldo/keto reductase family 16 309 6.5E-66 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_5816 d2306839ba999dea7d7367a389e7736d 332 SUPERFAMILY SSF51430 5 310 9.69E-88 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_1757 70d5fe425f8ede27f060d5c021a27de6 155 Pfam PF00583 Acetyltransferase (GNAT) family 34 135 4.9E-16 T 14-10-2018 IPR000182 GNAT domain Amir_1757 70d5fe425f8ede27f060d5c021a27de6 155 Gene3D G3DSA:3.40.630.30 3 155 4.9E-30 T 14-10-2018 Amir_1757 70d5fe425f8ede27f060d5c021a27de6 155 SUPERFAMILY SSF55729 29 153 5.23E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_4299 966dc944226519ed4a3dbbdd1003cfaf 249 PIRSF PIRSF036625 9 249 5.0E-55 T 14-10-2018 IPR012074 GAF-ANTAR transcription anti-termination regulator, putative Amir_4299 966dc944226519ed4a3dbbdd1003cfaf 249 SUPERFAMILY SSF52172 168 239 7.45E-11 T 14-10-2018 IPR011006 CheY-like superfamily Amir_4299 966dc944226519ed4a3dbbdd1003cfaf 249 Gene3D G3DSA:3.30.450.40 11 187 8.4E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_4299 966dc944226519ed4a3dbbdd1003cfaf 249 SUPERFAMILY SSF55781 35 180 6.98E-17 T 14-10-2018 Amir_4299 966dc944226519ed4a3dbbdd1003cfaf 249 Gene3D G3DSA:1.10.10.10 188 246 3.5E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4299 966dc944226519ed4a3dbbdd1003cfaf 249 Pfam PF13185 GAF domain 31 173 1.9E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_4299 966dc944226519ed4a3dbbdd1003cfaf 249 Pfam PF03861 ANTAR domain 187 238 7.6E-22 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_4299 966dc944226519ed4a3dbbdd1003cfaf 249 SMART SM01012 185 240 7.0E-23 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_0266 6a3d3aa94d617dbafbba5353fe5edd20 273 Gene3D G3DSA:1.20.58.480 17 273 1.4E-73 T 14-10-2018 Amir_0266 6a3d3aa94d617dbafbba5353fe5edd20 273 Pfam PF03301 Tryptophan 2,3-dioxygenase 14 200 6.8E-34 T 14-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 Amir_0266 6a3d3aa94d617dbafbba5353fe5edd20 273 SUPERFAMILY SSF140959 18 272 1.26E-76 T 14-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 Amir_0266 6a3d3aa94d617dbafbba5353fe5edd20 273 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 12 273 35.523 T 14-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 Amir_5728 7ce3c537be5a6bf9d71d787ca47a52c0 287 SUPERFAMILY SSF51690 115 286 6.28E-55 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Amir_5728 7ce3c537be5a6bf9d71d787ca47a52c0 287 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 14 285 6.7E-90 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 Amir_5728 7ce3c537be5a6bf9d71d787ca47a52c0 287 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 115 285 3.6E-55 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Amir_5728 7ce3c537be5a6bf9d71d787ca47a52c0 287 Gene3D G3DSA:3.90.1170.20 18 284 6.4E-99 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Amir_5728 7ce3c537be5a6bf9d71d787ca47a52c0 287 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 26 113 5.6E-21 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Amir_5728 7ce3c537be5a6bf9d71d787ca47a52c0 287 PIRSF PIRSF006250 6 287 3.8E-95 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 Amir_5728 7ce3c537be5a6bf9d71d787ca47a52c0 287 SUPERFAMILY SSF54675 11 114 8.24E-29 T 14-10-2018 Amir_5728 7ce3c537be5a6bf9d71d787ca47a52c0 287 Gene3D G3DSA:3.20.20.70 119 277 6.4E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_0780 af7842f2f02bec09d0caec49ac1037c1 143 Gene3D G3DSA:3.30.530.20 2 139 4.1E-14 T 14-10-2018 IPR023393 START-like domain superfamily Amir_0780 af7842f2f02bec09d0caec49ac1037c1 143 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 3 125 4.2E-9 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase Amir_0780 af7842f2f02bec09d0caec49ac1037c1 143 SUPERFAMILY SSF55961 3 136 2.85E-17 T 14-10-2018 Amir_1196 b360528f8901c8b278be1b16c082147e 73 Gene3D G3DSA:3.30.70.20 2 63 3.1E-17 T 14-10-2018 Amir_1196 b360528f8901c8b278be1b16c082147e 73 SUPERFAMILY SSF54862 5 61 7.96E-10 T 14-10-2018 Amir_1196 b360528f8901c8b278be1b16c082147e 73 PRINTS PR00352 3Fe-4S ferredoxin signature 19 29 3.1E-7 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Amir_1196 b360528f8901c8b278be1b16c082147e 73 PRINTS PR00352 3Fe-4S ferredoxin signature 47 59 3.1E-7 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Amir_1196 b360528f8901c8b278be1b16c082147e 73 PRINTS PR00352 3Fe-4S ferredoxin signature 8 19 3.1E-7 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Amir_1196 b360528f8901c8b278be1b16c082147e 73 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 8 59 3.3E-12 T 14-10-2018 Amir_5347 756e3ad97b20628e4c378dacfdd2469d 596 SUPERFAMILY SSF53850 59 399 6.15E-9 T 14-10-2018 Amir_5347 756e3ad97b20628e4c378dacfdd2469d 596 SUPERFAMILY SSF53300 407 592 2.38E-15 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_5347 756e3ad97b20628e4c378dacfdd2469d 596 Pfam PF13531 Bacterial extracellular solute-binding protein 61 360 2.5E-23 T 14-10-2018 Amir_5347 756e3ad97b20628e4c378dacfdd2469d 596 SMART SM00327 404 593 4.2E-7 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_5347 756e3ad97b20628e4c378dacfdd2469d 596 Gene3D G3DSA:3.40.50.410 405 594 2.5E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_5347 756e3ad97b20628e4c378dacfdd2469d 596 Pfam PF13519 von Willebrand factor type A domain 408 522 1.4E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_4843 20a653a6eaa12d97d88a56941b59434d 341 SUPERFAMILY SSF51735 14 334 2.19E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4843 20a653a6eaa12d97d88a56941b59434d 341 Pfam PF01370 NAD dependent epimerase/dehydratase family 20 264 1.2E-49 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_4843 20a653a6eaa12d97d88a56941b59434d 341 Gene3D G3DSA:3.40.50.720 17 333 2.0E-73 T 14-10-2018 Amir_1124 7a05d37aee9066a73e5b66ce74fed5e9 311 TIGRFAM TIGR01188 drrA: daunorubicin resistance ABC transporter, ATP-binding protein 13 306 7.0E-97 T 14-10-2018 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA GO:0005524|GO:0043215|GO:1900753 Amir_1124 7a05d37aee9066a73e5b66ce74fed5e9 311 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_1124 7a05d37aee9066a73e5b66ce74fed5e9 311 SUPERFAMILY SSF52540 5 228 8.15E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1124 7a05d37aee9066a73e5b66ce74fed5e9 311 Gene3D G3DSA:3.40.50.300 2 256 3.3E-63 T 14-10-2018 Amir_1124 7a05d37aee9066a73e5b66ce74fed5e9 311 SMART SM00382 30 213 1.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1124 7a05d37aee9066a73e5b66ce74fed5e9 311 Pfam PF00005 ABC transporter 21 164 3.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2581 98fbadb158b80b44d21b9765b6f957d4 287 SUPERFAMILY SSF160424 155 284 2.09E-11 T 14-10-2018 IPR036170 Probable antitoxin YezG superfamily Amir_2581 98fbadb158b80b44d21b9765b6f957d4 287 SUPERFAMILY SSF160424 15 138 3.01E-14 T 14-10-2018 IPR036170 Probable antitoxin YezG superfamily Amir_2736 38bb27d39ade8207ce2e86e81bb31f95 430 Pfam PF07730 Histidine kinase 225 290 8.0E-19 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_2736 38bb27d39ade8207ce2e86e81bb31f95 430 Gene3D G3DSA:3.30.565.10 303 425 3.8E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2736 38bb27d39ade8207ce2e86e81bb31f95 430 SUPERFAMILY SSF55874 309 424 2.44E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2736 38bb27d39ade8207ce2e86e81bb31f95 430 SMART SM00387 335 427 2.2E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_1288 0bb796c048a50c18f8e775c90a83730d 456 Pfam PF01580 FtsK/SpoIIIE family 214 308 5.1E-6 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Amir_1288 0bb796c048a50c18f8e775c90a83730d 456 SUPERFAMILY SSF52540 181 443 2.56E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1288 0bb796c048a50c18f8e775c90a83730d 456 Gene3D G3DSA:3.40.50.300 189 452 3.4E-34 T 14-10-2018 Amir_2141 839425bbe4a658fd89d0e9b4f272aa30 200 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 192 3.1E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_2141 839425bbe4a658fd89d0e9b4f272aa30 200 SUPERFAMILY SSF88946 3 92 2.83E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_2141 839425bbe4a658fd89d0e9b4f272aa30 200 SUPERFAMILY SSF88659 133 194 2.06E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_2141 839425bbe4a658fd89d0e9b4f272aa30 200 Gene3D G3DSA:1.10.10.10 133 197 2.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2141 839425bbe4a658fd89d0e9b4f272aa30 200 Pfam PF04542 Sigma-70 region 2 22 84 1.0E-14 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_2141 839425bbe4a658fd89d0e9b4f272aa30 200 Pfam PF08281 Sigma-70, region 4 137 186 1.5E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_2141 839425bbe4a658fd89d0e9b4f272aa30 200 Gene3D G3DSA:1.10.1740.10 1 97 1.4E-19 T 14-10-2018 Amir_0983 9cac1f4f1fd85ff3f2901978c317a2af 375 Gene3D G3DSA:1.10.540.10 2 93 7.5E-8 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_0983 9cac1f4f1fd85ff3f2901978c317a2af 375 Gene3D G3DSA:1.20.140.10 201 374 7.6E-50 T 14-10-2018 Amir_0983 9cac1f4f1fd85ff3f2901978c317a2af 375 PIRSF PIRSF016578 2 371 4.1E-24 T 14-10-2018 Amir_0983 9cac1f4f1fd85ff3f2901978c317a2af 375 SUPERFAMILY SSF56645 8 198 1.57E-27 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_0983 9cac1f4f1fd85ff3f2901978c317a2af 375 Gene3D G3DSA:2.40.110.10 102 197 2.0E-24 T 14-10-2018 Amir_0983 9cac1f4f1fd85ff3f2901978c317a2af 375 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 221 350 1.1E-16 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Amir_0983 9cac1f4f1fd85ff3f2901978c317a2af 375 SUPERFAMILY SSF47203 219 368 1.11E-16 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_6978 0af19b92c89d6da0a3e8dcde0d30d9a3 212 Gene3D G3DSA:3.30.1050.10 104 210 1.2E-21 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Amir_6978 0af19b92c89d6da0a3e8dcde0d30d9a3 212 Pfam PF02036 SCP-2 sterol transfer family 111 208 3.1E-14 T 14-10-2018 IPR003033 SCP2 sterol-binding domain Amir_6978 0af19b92c89d6da0a3e8dcde0d30d9a3 212 SUPERFAMILY SSF55718 105 209 5.65E-20 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Amir_4916 05388c96a27a3d8e60441dc9c57292d2 423 Pfam PF07690 Major Facilitator Superfamily 21 356 2.0E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_4916 05388c96a27a3d8e60441dc9c57292d2 423 Gene3D G3DSA:1.20.1250.20 9 402 1.2E-28 T 14-10-2018 Amir_4916 05388c96a27a3d8e60441dc9c57292d2 423 SUPERFAMILY SSF103473 12 404 5.23E-38 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_5984 01be0dcda68d7915c7c50b06e4705455 171 Gene3D G3DSA:3.40.630.30 1 155 6.0E-35 T 14-10-2018 Amir_5984 01be0dcda68d7915c7c50b06e4705455 171 SUPERFAMILY SSF55729 5 141 4.8E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_5984 01be0dcda68d7915c7c50b06e4705455 171 Pfam PF00583 Acetyltransferase (GNAT) family 34 130 7.9E-12 T 14-10-2018 IPR000182 GNAT domain Amir_3924 8ffc9812b79dfd6c6908efed272586e7 606 Pfam PF16861 Carbamoyltransferase C-terminus 401 585 1.6E-74 T 14-10-2018 IPR031730 Carbamoyltransferase, C-terminal Amir_3924 8ffc9812b79dfd6c6908efed272586e7 606 SUPERFAMILY SSF53067 6 350 5.83E-21 T 14-10-2018 Amir_3924 8ffc9812b79dfd6c6908efed272586e7 606 Pfam PF02543 Carbamoyltransferase N-terminus 6 346 1.6E-84 T 14-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 Amir_3924 8ffc9812b79dfd6c6908efed272586e7 606 Gene3D G3DSA:3.30.420.350 130 339 5.9E-104 T 14-10-2018 Amir_3924 8ffc9812b79dfd6c6908efed272586e7 606 Gene3D G3DSA:3.90.870.20 364 586 4.5E-83 T 14-10-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily Amir_3924 8ffc9812b79dfd6c6908efed272586e7 606 Gene3D G3DSA:3.30.420.40 12 346 5.9E-104 T 14-10-2018 Amir_0452 f99570428ecb9587c8f702004a3487e6 312 Gene3D G3DSA:3.20.20.120 57 283 6.6E-129 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_0452 f99570428ecb9587c8f702004a3487e6 312 SMART SM00922 73 173 6.5E-21 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Amir_0452 f99570428ecb9587c8f702004a3487e6 312 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 1 300 21.159 T 14-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 Amir_0452 f99570428ecb9587c8f702004a3487e6 312 Pfam PF13378 Enolase C-terminal domain-like 79 281 1.0E-36 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Amir_0452 f99570428ecb9587c8f702004a3487e6 312 SUPERFAMILY SSF51604 63 281 2.1E-51 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_0452 f99570428ecb9587c8f702004a3487e6 312 Gene3D G3DSA:3.30.390.10 4 304 6.6E-129 T 14-10-2018 IPR029017 Enolase-like, N-terminal Amir_1239 16ce701b0f70d0bad5122f717f559e92 570 Gene3D G3DSA:3.90.480.20 39 411 1.5E-121 T 14-10-2018 Amir_1239 16ce701b0f70d0bad5122f717f559e92 570 SUPERFAMILY SSF56014 177 336 1.57E-45 T 14-10-2018 Amir_1239 16ce701b0f70d0bad5122f717f559e92 570 SUPERFAMILY SSF56014 423 567 7.07E-37 T 14-10-2018 Amir_1239 16ce701b0f70d0bad5122f717f559e92 570 PRINTS PR00397 Sirohaem Fe-binding site signature 427 445 1.0E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_1239 16ce701b0f70d0bad5122f717f559e92 570 PRINTS PR00397 Sirohaem Fe-binding site signature 476 494 1.0E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_1239 16ce701b0f70d0bad5122f717f559e92 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 427 564 1.0E-10 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_1239 16ce701b0f70d0bad5122f717f559e92 570 Gene3D G3DSA:3.30.413.10 424 570 1.1E-41 T 14-10-2018 Amir_1239 16ce701b0f70d0bad5122f717f559e92 570 SUPERFAMILY SSF55124 26 176 2.13E-37 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_1239 16ce701b0f70d0bad5122f717f559e92 570 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 476 492 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_1239 16ce701b0f70d0bad5122f717f559e92 570 SUPERFAMILY SSF55124 344 420 2.29E-18 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_1239 16ce701b0f70d0bad5122f717f559e92 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 350 415 1.7E-12 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_1239 16ce701b0f70d0bad5122f717f559e92 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 106 168 6.8E-18 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_1239 16ce701b0f70d0bad5122f717f559e92 570 Gene3D G3DSA:3.30.413.10 169 345 1.5E-121 T 14-10-2018 Amir_1239 16ce701b0f70d0bad5122f717f559e92 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 177 330 9.6E-39 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_2164 069a90aabd725b886499c5a0ba015cba 295 Gene3D G3DSA:3.90.1200.10 119 283 4.5E-7 T 14-10-2018 Amir_2164 069a90aabd725b886499c5a0ba015cba 295 SUPERFAMILY SSF56112 46 262 1.41E-22 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_2164 069a90aabd725b886499c5a0ba015cba 295 Pfam PF01636 Phosphotransferase enzyme family 39 262 3.3E-21 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_2164 069a90aabd725b886499c5a0ba015cba 295 PIRSF PIRSF000707 1 295 2.3E-80 T 14-10-2018 IPR016259 Hygromycin-B kinase Amir_1459 37fa4badf1d4e97da86fc8e5bac215bc 332 Gene3D G3DSA:3.20.20.140 1 331 5.5E-93 T 14-10-2018 Amir_1459 37fa4badf1d4e97da86fc8e5bac215bc 332 Pfam PF00962 Adenosine/AMP deaminase 8 325 1.2E-69 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 Amir_1459 37fa4badf1d4e97da86fc8e5bac215bc 332 SUPERFAMILY SSF51556 3 325 6.81E-72 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_1459 37fa4badf1d4e97da86fc8e5bac215bc 332 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 328 3.5E-75 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 Amir_4549 bc27a8f69a3cf42c1c2bcf294d8e9a55 690 Gene3D G3DSA:2.40.10.10 167 356 1.1E-11 T 14-10-2018 Amir_4549 bc27a8f69a3cf42c1c2bcf294d8e9a55 690 SMART SM00020 151 356 2.1E-5 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_4549 bc27a8f69a3cf42c1c2bcf294d8e9a55 690 SUPERFAMILY SSF50494 160 360 1.51E-20 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_4549 bc27a8f69a3cf42c1c2bcf294d8e9a55 690 Pfam PF00089 Trypsin 157 356 2.5E-14 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_4549 bc27a8f69a3cf42c1c2bcf294d8e9a55 690 Gene3D G3DSA:2.40.10.10 162 350 1.1E-11 T 14-10-2018 Amir_4549 bc27a8f69a3cf42c1c2bcf294d8e9a55 690 Gene3D G3DSA:2.40.128.340 460 542 2.5E-7 T 14-10-2018 Amir_4549 bc27a8f69a3cf42c1c2bcf294d8e9a55 690 SUPERFAMILY SSF69318 365 655 2.88E-26 T 14-10-2018 Amir_4549 bc27a8f69a3cf42c1c2bcf294d8e9a55 690 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 526 592 4.7E-7 T 14-10-2018 Amir_4549 bc27a8f69a3cf42c1c2bcf294d8e9a55 690 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 414 481 5.4E-8 T 14-10-2018 Amir_4549 bc27a8f69a3cf42c1c2bcf294d8e9a55 690 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 180 195 4.1E-7 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_4549 bc27a8f69a3cf42c1c2bcf294d8e9a55 690 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 305 317 4.1E-7 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_4549 bc27a8f69a3cf42c1c2bcf294d8e9a55 690 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 235 249 4.1E-7 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_4923 4dbcb66041cbbc59167869951c984162 345 Gene3D G3DSA:3.90.190.10 114 345 3.4E-51 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Amir_4923 4dbcb66041cbbc59167869951c984162 345 Pfam PF13350 Tyrosine phosphatase family 114 344 2.1E-52 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type Amir_4923 4dbcb66041cbbc59167869951c984162 345 SUPERFAMILY SSF52799 114 344 1.5E-45 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Amir_4923 4dbcb66041cbbc59167869951c984162 345 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 258 268 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 Amir_1762 f4b6f617b7963f0aeac4cb76cd363221 785 Pfam PF12836 Helix-hairpin-helix motif 488 552 1.3E-27 T 14-10-2018 Amir_1762 f4b6f617b7963f0aeac4cb76cd363221 785 Pfam PF16921 Tex protein YqgF-like domain 323 448 1.3E-51 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain Amir_1762 f4b6f617b7963f0aeac4cb76cd363221 785 SUPERFAMILY SSF50249 632 719 1.57E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_1762 f4b6f617b7963f0aeac4cb76cd363221 785 Pfam PF00575 S1 RNA binding domain 644 715 1.5E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 Amir_1762 f4b6f617b7963f0aeac4cb76cd363221 785 Pfam PF09371 Tex-like protein N-terminal domain 9 190 5.8E-66 T 14-10-2018 IPR018974 Tex-like protein, N-terminal Amir_1762 f4b6f617b7963f0aeac4cb76cd363221 785 Gene3D G3DSA:1.10.10.650 2 109 6.9E-39 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily Amir_1762 f4b6f617b7963f0aeac4cb76cd363221 785 SMART SM00316 644 715 3.2E-24 T 14-10-2018 IPR022967 RNA-binding domain, S1 Amir_1762 f4b6f617b7963f0aeac4cb76cd363221 785 SUPERFAMILY SSF47781 467 555 2.22E-26 T 14-10-2018 IPR010994 RuvA domain 2-like Amir_1762 f4b6f617b7963f0aeac4cb76cd363221 785 Gene3D G3DSA:3.30.420.140 321 448 1.5E-145 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Amir_1762 f4b6f617b7963f0aeac4cb76cd363221 785 SMART SM00732 322 421 1.9E-39 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Amir_1762 f4b6f617b7963f0aeac4cb76cd363221 785 SUPERFAMILY SSF158832 3 317 4.32E-114 T 14-10-2018 Amir_1762 f4b6f617b7963f0aeac4cb76cd363221 785 Gene3D G3DSA:1.10.3500.10 112 495 1.5E-145 T 14-10-2018 IPR023323 Tex-like domain superfamily Amir_1762 f4b6f617b7963f0aeac4cb76cd363221 785 Gene3D G3DSA:2.40.50.140 626 720 1.5E-28 T 14-10-2018 Amir_1762 f4b6f617b7963f0aeac4cb76cd363221 785 SUPERFAMILY SSF47781 557 626 4.0E-17 T 14-10-2018 IPR010994 RuvA domain 2-like Amir_1762 f4b6f617b7963f0aeac4cb76cd363221 785 Gene3D G3DSA:1.10.150.310 496 625 2.2E-46 T 14-10-2018 Amir_1762 f4b6f617b7963f0aeac4cb76cd363221 785 SUPERFAMILY SSF53098 318 466 4.1E-50 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_1293 6b7ff7cd4160a4ffda7e65411532fc33 59 SUPERFAMILY SSF46955 4 53 4.27E-11 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_1293 6b7ff7cd4160a4ffda7e65411532fc33 59 Pfam PF12728 Helix-turn-helix domain 6 53 2.2E-11 T 14-10-2018 Amir_1293 6b7ff7cd4160a4ffda7e65411532fc33 59 Gene3D G3DSA:1.10.1660.10 1 52 1.4E-5 T 14-10-2018 Amir_6311 25f401389dcde152b83eba0569031165 210 SUPERFAMILY SSF52540 1 195 3.61E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6311 25f401389dcde152b83eba0569031165 210 Gene3D G3DSA:3.40.50.300 1 204 2.7E-44 T 14-10-2018 Amir_6311 25f401389dcde152b83eba0569031165 210 Pfam PF02223 Thymidylate kinase 2 152 2.5E-16 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Amir_6141 877d4cd43b151bb5b5b0186396c337bc 73 ProSitePatterns PS00605 ATP synthase c subunit signature. 38 59 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6141 877d4cd43b151bb5b5b0186396c337bc 73 SUPERFAMILY SSF81333 12 72 7.45E-18 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Amir_6141 877d4cd43b151bb5b5b0186396c337bc 73 PRINTS PR00124 ATP synthase C subunit signature 31 46 2.6E-18 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6141 877d4cd43b151bb5b5b0186396c337bc 73 PRINTS PR00124 ATP synthase C subunit signature 48 73 2.6E-18 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6141 877d4cd43b151bb5b5b0186396c337bc 73 PRINTS PR00124 ATP synthase C subunit signature 10 29 2.6E-18 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6141 877d4cd43b151bb5b5b0186396c337bc 73 Pfam PF00137 ATP synthase subunit C 15 71 2.5E-12 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Amir_6141 877d4cd43b151bb5b5b0186396c337bc 73 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 18 72 4.4E-20 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Amir_6141 877d4cd43b151bb5b5b0186396c337bc 73 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 73 15.209 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6141 877d4cd43b151bb5b5b0186396c337bc 73 Gene3D G3DSA:1.20.20.10 9 73 5.9E-23 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_2958 21c58e40c61238b8d0298bb4a9f29f51 155 SUPERFAMILY SSF160424 11 143 1.31E-21 T 14-10-2018 IPR036170 Probable antitoxin YezG superfamily Amir_4085 616664b0672b89927b052feff9f75871 394 SUPERFAMILY SSF56645 16 207 1.13E-33 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_4085 616664b0672b89927b052feff9f75871 394 SUPERFAMILY SSF47203 232 369 1.77E-9 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_4085 616664b0672b89927b052feff9f75871 394 Gene3D G3DSA:1.10.540.10 4 112 2.8E-30 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_4085 616664b0672b89927b052feff9f75871 394 Gene3D G3DSA:1.20.140.10 214 394 1.0E-35 T 14-10-2018 Amir_4085 616664b0672b89927b052feff9f75871 394 PIRSF PIRSF016578 1 394 4.9E-113 T 14-10-2018 Amir_4085 616664b0672b89927b052feff9f75871 394 Gene3D G3DSA:2.40.110.10 115 207 3.6E-24 T 14-10-2018 Amir_4085 616664b0672b89927b052feff9f75871 394 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 25 104 3.2E-8 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_4085 616664b0672b89927b052feff9f75871 394 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 240 366 2.5E-23 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Amir_4119 91a2c95537fb6ca1868ac4fe47bfb622 262 SMART SM00342 23 106 1.2E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4119 91a2c95537fb6ca1868ac4fe47bfb622 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 102 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amir_4119 91a2c95537fb6ca1868ac4fe47bfb622 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 1.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amir_4119 91a2c95537fb6ca1868ac4fe47bfb622 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 1.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amir_4119 91a2c95537fb6ca1868ac4fe47bfb622 262 SUPERFAMILY SSF46689 8 56 3.32E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4119 91a2c95537fb6ca1868ac4fe47bfb622 262 Gene3D G3DSA:1.10.10.60 3 109 4.8E-29 T 14-10-2018 Amir_4119 91a2c95537fb6ca1868ac4fe47bfb622 262 SUPERFAMILY SSF46689 59 107 1.48E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4119 91a2c95537fb6ca1868ac4fe47bfb622 262 Pfam PF12833 Helix-turn-helix domain 29 107 4.2E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_2081 da6e894dcc8e2213691de5fb381fb861 253 Pfam PF14428 SCP1.201-like deaminase 144 252 3.0E-18 T 14-10-2018 IPR032724 Deaminase, SCP1.201-like Amir_6541 592720607df901a670e93b55cd8ae64c 309 SMART SM00422 4 73 3.8E-4 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6541 592720607df901a670e93b55cd8ae64c 309 Gene3D G3DSA:1.10.1660.10 2 73 6.3E-18 T 14-10-2018 Amir_6541 592720607df901a670e93b55cd8ae64c 309 Pfam PF13411 MerR HTH family regulatory protein 5 69 4.0E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6541 592720607df901a670e93b55cd8ae64c 309 SUPERFAMILY SSF52242 190 285 2.04E-8 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amir_6541 592720607df901a670e93b55cd8ae64c 309 Gene3D G3DSA:3.40.50.280 191 303 1.0E-17 T 14-10-2018 Amir_6541 592720607df901a670e93b55cd8ae64c 309 SUPERFAMILY SSF46955 4 70 1.14E-10 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_1246 346db6c2a1cb0634b9c6060780848306 221 SUPERFAMILY SSF53474 15 206 8.51E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1246 346db6c2a1cb0634b9c6060780848306 221 Gene3D G3DSA:3.40.50.1820 1 210 1.8E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1246 346db6c2a1cb0634b9c6060780848306 221 Pfam PF00326 Prolyl oligopeptidase family 88 198 1.1E-12 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Amir_2346 b8dc988620450ea9748b59a447e5f748 338 SUPERFAMILY SSF48029 116 328 1.31E-61 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Amir_2346 b8dc988620450ea9748b59a447e5f748 338 Gene3D G3DSA:1.10.220.30 107 193 1.7E-30 T 14-10-2018 Amir_2346 b8dc988620450ea9748b59a447e5f748 338 Gene3D G3DSA:1.10.220.30 2 85 4.8E-16 T 14-10-2018 Amir_2346 b8dc988620450ea9748b59a447e5f748 338 Gene3D G3DSA:1.10.220.30 198 337 1.3E-45 T 14-10-2018 Amir_2346 b8dc988620450ea9748b59a447e5f748 338 Pfam PF14841 FliG middle domain 117 189 1.2E-28 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Amir_2346 b8dc988620450ea9748b59a447e5f748 338 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 5 337 3.8E-107 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amir_2346 b8dc988620450ea9748b59a447e5f748 338 PIRSF PIRSF003161 1 337 8.5E-107 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amir_2346 b8dc988620450ea9748b59a447e5f748 338 SUPERFAMILY SSF48029 6 101 2.49E-18 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Amir_2346 b8dc988620450ea9748b59a447e5f748 338 Pfam PF01706 FliG C-terminal domain 220 327 5.5E-38 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Amir_2346 b8dc988620450ea9748b59a447e5f748 338 Pfam PF14842 FliG N-terminal domain 6 101 2.2E-27 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Amir_2346 b8dc988620450ea9748b59a447e5f748 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 251 271 8.9E-63 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amir_2346 b8dc988620450ea9748b59a447e5f748 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 116 139 8.9E-63 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amir_2346 b8dc988620450ea9748b59a447e5f748 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 7 23 8.9E-63 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amir_2346 b8dc988620450ea9748b59a447e5f748 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 275 301 8.9E-63 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amir_2346 b8dc988620450ea9748b59a447e5f748 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 229 249 8.9E-63 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amir_2346 b8dc988620450ea9748b59a447e5f748 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 36 62 8.9E-63 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amir_2346 b8dc988620450ea9748b59a447e5f748 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 198 223 8.9E-63 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amir_6867 965f0250ea28b8b0b98a82af6525355a 494 Gene3D G3DSA:1.20.1260.20 12 117 5.8E-12 T 14-10-2018 IPR038332 PPE superfamily Amir_6867 965f0250ea28b8b0b98a82af6525355a 494 Pfam PF00823 PPE family 16 174 3.5E-9 T 14-10-2018 IPR000030 PPE family Amir_6867 965f0250ea28b8b0b98a82af6525355a 494 SUPERFAMILY SSF140459 14 190 6.54E-14 T 14-10-2018 Amir_0143 06c0fb95c65887b363fb942109021b89 575 Pfam PF02872 5'-nucleotidase, C-terminal domain 374 538 4.4E-38 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amir_0143 06c0fb95c65887b363fb942109021b89 575 Gene3D G3DSA:3.90.780.10 377 574 5.1E-54 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amir_0143 06c0fb95c65887b363fb942109021b89 575 Pfam PF00149 Calcineurin-like phosphoesterase 44 293 3.4E-7 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amir_0143 06c0fb95c65887b363fb942109021b89 575 Gene3D G3DSA:3.60.21.10 39 372 2.2E-62 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Amir_0143 06c0fb95c65887b363fb942109021b89 575 SUPERFAMILY SSF56300 38 371 6.15E-62 T 14-10-2018 Amir_0143 06c0fb95c65887b363fb942109021b89 575 SUPERFAMILY SSF55816 371 574 1.83E-48 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amir_0143 06c0fb95c65887b363fb942109021b89 575 PRINTS PR01607 Apyrase family signature 307 327 1.6E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amir_0143 06c0fb95c65887b363fb942109021b89 575 PRINTS PR01607 Apyrase family signature 437 460 1.6E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amir_0143 06c0fb95c65887b363fb942109021b89 575 PRINTS PR01607 Apyrase family signature 41 59 1.6E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amir_0143 06c0fb95c65887b363fb942109021b89 575 PRINTS PR01607 Apyrase family signature 276 299 1.6E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amir_0143 06c0fb95c65887b363fb942109021b89 575 PRINTS PR01607 Apyrase family signature 512 531 1.6E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amir_0143 06c0fb95c65887b363fb942109021b89 575 PRINTS PR01607 Apyrase family signature 241 258 1.6E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amir_6529 cc811c10e06b4572df6037f7f7707043 519 SUPERFAMILY SSF52317 8 229 4.44E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_6529 cc811c10e06b4572df6037f7f7707043 519 Pfam PF00117 Glutamine amidotransferase class-I 11 192 3.4E-39 T 14-10-2018 IPR017926 Glutamine amidotransferase Amir_6529 cc811c10e06b4572df6037f7f7707043 519 SUPERFAMILY SSF52402 185 439 5.73E-57 T 14-10-2018 Amir_6529 cc811c10e06b4572df6037f7f7707043 519 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 195 1.0E-70 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Amir_6529 cc811c10e06b4572df6037f7f7707043 519 Gene3D G3DSA:3.40.50.880 6 201 1.5E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_6529 cc811c10e06b4572df6037f7f7707043 519 PRINTS PR00097 Anthranilate synthase component II signature 53 62 1.1E-5 T 14-10-2018 Amir_6529 cc811c10e06b4572df6037f7f7707043 519 PRINTS PR00097 Anthranilate synthase component II signature 169 182 1.1E-5 T 14-10-2018 Amir_6529 cc811c10e06b4572df6037f7f7707043 519 PRINTS PR00097 Anthranilate synthase component II signature 80 91 1.1E-5 T 14-10-2018 Amir_6529 cc811c10e06b4572df6037f7f7707043 519 SUPERFAMILY SSF54810 398 519 9.02E-47 T 14-10-2018 Amir_6529 cc811c10e06b4572df6037f7f7707043 519 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 519 53.848 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 Amir_6529 cc811c10e06b4572df6037f7f7707043 519 Gene3D G3DSA:3.30.300.10 399 519 2.2E-52 T 14-10-2018 Amir_6529 cc811c10e06b4572df6037f7f7707043 519 Pfam PF00958 GMP synthase C terminal domain 426 518 1.2E-38 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Amir_6529 cc811c10e06b4572df6037f7f7707043 519 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 1.4E-5 T 14-10-2018 Amir_6529 cc811c10e06b4572df6037f7f7707043 519 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 1.4E-5 T 14-10-2018 Amir_6529 cc811c10e06b4572df6037f7f7707043 519 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 1.4E-5 T 14-10-2018 Amir_6529 cc811c10e06b4572df6037f7f7707043 519 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 519 5.2E-148 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Amir_6529 cc811c10e06b4572df6037f7f7707043 519 Gene3D G3DSA:3.40.50.620 202 398 8.0E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_6529 cc811c10e06b4572df6037f7f7707043 519 Pfam PF02540 NAD synthase 216 251 1.5E-5 T 14-10-2018 IPR022310 NAD/GMP synthase Amir_6529 cc811c10e06b4572df6037f7f7707043 519 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 4.3E-8 T 14-10-2018 Amir_6529 cc811c10e06b4572df6037f7f7707043 519 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.3E-8 T 14-10-2018 Amir_6529 cc811c10e06b4572df6037f7f7707043 519 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 4.3E-8 T 14-10-2018 Amir_3973 998a8090387fdf86e271e02a5215ccf6 505 SUPERFAMILY SSF53850 35 503 6.7E-81 T 14-10-2018 Amir_3973 998a8090387fdf86e271e02a5215ccf6 505 PIRSF PIRSF002741 2 495 9.2E-50 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amir_3973 998a8090387fdf86e271e02a5215ccf6 505 Gene3D G3DSA:3.40.190.10 52 279 1.0E-74 T 14-10-2018 Amir_3973 998a8090387fdf86e271e02a5215ccf6 505 Gene3D G3DSA:3.10.105.10 280 475 1.0E-74 T 14-10-2018 Amir_3973 998a8090387fdf86e271e02a5215ccf6 505 Gene3D G3DSA:3.90.76.10 74 188 1.0E-74 T 14-10-2018 Amir_3973 998a8090387fdf86e271e02a5215ccf6 505 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 401 5.8E-52 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Amir_0952 0d64b2b39576fc7b0f2eda8b14a9d55c 377 SUPERFAMILY SSF53448 47 265 1.74E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0952 0d64b2b39576fc7b0f2eda8b14a9d55c 377 Pfam PF00535 Glycosyl transferase family 2 52 181 2.8E-28 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_0952 0d64b2b39576fc7b0f2eda8b14a9d55c 377 Gene3D G3DSA:3.90.550.10 36 235 2.0E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0797 ddf7df40b0e9dd639419daa68424eac0 512 SUPERFAMILY SSF50494 216 422 1.65E-53 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_0797 ddf7df40b0e9dd639419daa68424eac0 512 SMART SM00228 399 500 1.8E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Amir_0797 ddf7df40b0e9dd639419daa68424eac0 512 Gene3D G3DSA:2.40.10.10 307 423 5.4E-41 T 14-10-2018 Amir_0797 ddf7df40b0e9dd639419daa68424eac0 512 Gene3D G3DSA:2.40.10.10 210 305 3.9E-26 T 14-10-2018 Amir_0797 ddf7df40b0e9dd639419daa68424eac0 512 Pfam PF13180 PDZ domain 435 509 3.1E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Amir_0797 ddf7df40b0e9dd639419daa68424eac0 512 SUPERFAMILY SSF50156 441 510 2.1E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Amir_0797 ddf7df40b0e9dd639419daa68424eac0 512 PRINTS PR00834 HtrA/DegQ protease family signature 458 470 1.8E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_0797 ddf7df40b0e9dd639419daa68424eac0 512 PRINTS PR00834 HtrA/DegQ protease family signature 358 375 1.8E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_0797 ddf7df40b0e9dd639419daa68424eac0 512 PRINTS PR00834 HtrA/DegQ protease family signature 380 397 1.8E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_0797 ddf7df40b0e9dd639419daa68424eac0 512 PRINTS PR00834 HtrA/DegQ protease family signature 317 341 1.8E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_0797 ddf7df40b0e9dd639419daa68424eac0 512 PRINTS PR00834 HtrA/DegQ protease family signature 277 297 1.8E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_0797 ddf7df40b0e9dd639419daa68424eac0 512 PRINTS PR00834 HtrA/DegQ protease family signature 251 263 1.8E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amir_0797 ddf7df40b0e9dd639419daa68424eac0 512 Gene3D G3DSA:2.30.42.10 424 512 3.0E-20 T 14-10-2018 Amir_0797 ddf7df40b0e9dd639419daa68424eac0 512 Pfam PF13365 Trypsin-like peptidase domain 242 387 1.7E-31 T 14-10-2018 Amir_5110 f72880abda0cd0e27a066d059361c2cc 57 Pfam PF05532 CsbD-like 5 57 1.6E-17 T 14-10-2018 IPR008462 CsbD-like domain Amir_5110 f72880abda0cd0e27a066d059361c2cc 57 SUPERFAMILY SSF69047 5 56 9.55E-10 T 14-10-2018 IPR036629 YjbJ superfamily Amir_5110 f72880abda0cd0e27a066d059361c2cc 57 Gene3D G3DSA:1.10.1470.10 4 57 1.2E-6 T 14-10-2018 IPR036629 YjbJ superfamily Amir_1950 22f43b537e98545974290d70d6a4d23f 264 Pfam PF13531 Bacterial extracellular solute-binding protein 44 261 2.2E-41 T 14-10-2018 Amir_1950 22f43b537e98545974290d70d6a4d23f 264 SUPERFAMILY SSF53850 43 263 4.74E-49 T 14-10-2018 Amir_1950 22f43b537e98545974290d70d6a4d23f 264 PIRSF PIRSF004846 3 264 1.6E-62 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Amir_1950 22f43b537e98545974290d70d6a4d23f 264 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 49 258 3.2E-36 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Amir_1950 22f43b537e98545974290d70d6a4d23f 264 Gene3D G3DSA:3.40.190.10 122 224 1.9E-56 T 14-10-2018 Amir_1950 22f43b537e98545974290d70d6a4d23f 264 Gene3D G3DSA:3.40.190.10 46 261 1.9E-56 T 14-10-2018 Amir_1980 06f46dade953533b8974e39bb8f9970a 313 SUPERFAMILY SSF161098 31 312 3.66E-54 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1980 06f46dade953533b8974e39bb8f9970a 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 305 5.6E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_1980 06f46dade953533b8974e39bb8f9970a 313 Gene3D G3DSA:1.10.3720.10 26 304 5.1E-67 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3804 40c1d57dedc16647c62337f49dfc1371 141 Pfam PF02082 Transcriptional regulator 1 79 1.4E-17 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Amir_3804 40c1d57dedc16647c62337f49dfc1371 141 Gene3D G3DSA:1.10.10.10 1 132 5.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3804 40c1d57dedc16647c62337f49dfc1371 141 SUPERFAMILY SSF46785 3 129 4.69E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3804 40c1d57dedc16647c62337f49dfc1371 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 127 4.5E-25 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Amir_0023 3b165eb1ccc5219509016e4c92212107 488 Gene3D G3DSA:3.90.1310.10 58 380 1.2E-138 T 14-10-2018 Amir_0023 3b165eb1ccc5219509016e4c92212107 488 SUPERFAMILY SSF56601 96 486 2.18E-79 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_0023 3b165eb1ccc5219509016e4c92212107 488 Pfam PF00905 Penicillin binding protein transpeptidase domain 156 481 5.8E-65 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Amir_0023 3b165eb1ccc5219509016e4c92212107 488 Gene3D G3DSA:3.40.710.10 138 481 1.2E-138 T 14-10-2018 Amir_1465 585321c3285a7eb45951b73085da1449 230 Gene3D G3DSA:1.10.10.10 1 73 7.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1465 585321c3285a7eb45951b73085da1449 230 Gene3D G3DSA:2.30.30.90 151 229 5.8E-12 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain Amir_1465 585321c3285a7eb45951b73085da1449 230 Pfam PF04023 FeoA domain 162 228 4.8E-8 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Amir_1465 585321c3285a7eb45951b73085da1449 230 Gene3D G3DSA:1.10.60.10 74 140 2.1E-29 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 Amir_1465 585321c3285a7eb45951b73085da1449 230 SMART SM00899 152 229 0.002 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Amir_1465 585321c3285a7eb45951b73085da1449 230 SUPERFAMILY SSF50037 130 228 2.52E-21 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal Amir_1465 585321c3285a7eb45951b73085da1449 230 SMART SM00529 26 125 1.4E-43 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 Amir_1465 585321c3285a7eb45951b73085da1449 230 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 3 62 2.5E-21 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 Amir_1465 585321c3285a7eb45951b73085da1449 230 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 65 133 4.8E-29 T 14-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 Amir_1465 585321c3285a7eb45951b73085da1449 230 SUPERFAMILY SSF47979 65 137 2.35E-26 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 Amir_1465 585321c3285a7eb45951b73085da1449 230 SUPERFAMILY SSF46785 2 62 4.18E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6472 d696d4a7a4cde8c282ccb838ae12f420 838 Pfam PF04055 Radical SAM superfamily 80 257 1.5E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_6472 d696d4a7a4cde8c282ccb838ae12f420 838 TIGRFAM TIGR03550 F420_cofG: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit 73 398 8.3E-146 T 14-10-2018 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77 Amir_6472 d696d4a7a4cde8c282ccb838ae12f420 838 TIGRFAM TIGR03551 F420_cofH: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit 492 832 5.0E-151 T 14-10-2018 IPR019940 CofH family GO:0016765 KEGG: 00680+2.5.1.77 Amir_6472 d696d4a7a4cde8c282ccb838ae12f420 838 Hamap MF_01612 FO synthase subunit 2 [cofH]. 469 835 47.611 T 14-10-2018 IPR019940 CofH family GO:0016765 KEGG: 00680+2.5.1.77 Amir_6472 d696d4a7a4cde8c282ccb838ae12f420 838 SUPERFAMILY SSF102114 494 798 6.28E-45 T 14-10-2018 Amir_6472 d696d4a7a4cde8c282ccb838ae12f420 838 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 524 831 6.2E-106 T 14-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 Amir_6472 d696d4a7a4cde8c282ccb838ae12f420 838 SUPERFAMILY SSF102114 36 374 4.45E-39 T 14-10-2018 Amir_6472 d696d4a7a4cde8c282ccb838ae12f420 838 Pfam PF04055 Radical SAM superfamily 532 692 9.6E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_6472 d696d4a7a4cde8c282ccb838ae12f420 838 Gene3D G3DSA:3.20.20.70 11 321 6.3E-57 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_6472 d696d4a7a4cde8c282ccb838ae12f420 838 Gene3D G3DSA:3.20.20.70 471 824 1.6E-48 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_6472 d696d4a7a4cde8c282ccb838ae12f420 838 SMART SM00729 76 310 2.2E-10 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amir_6472 d696d4a7a4cde8c282ccb838ae12f420 838 Hamap MF_01611 FO synthase subunit 1 [cofG]. 72 400 50.461 T 14-10-2018 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77 Amir_5556 ee3adae1671e3da73fada2068cbd9c07 87 SUPERFAMILY SSF47413 8 43 5.94E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_5556 ee3adae1671e3da73fada2068cbd9c07 87 Gene3D G3DSA:1.10.260.40 2 83 1.8E-8 T 14-10-2018 Amir_5556 ee3adae1671e3da73fada2068cbd9c07 87 Pfam PF01381 Helix-turn-helix 13 45 9.0E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_0772 47125f4655611564c5a43073cdd4d839 324 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 238 270 1.8E-14 T 14-10-2018 IPR001451 Hexapeptide repeat Amir_0772 47125f4655611564c5a43073cdd4d839 324 TIGRFAM TIGR03535 DapD_actino: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 9 323 1.7E-152 T 14-10-2018 IPR019875 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, actinobacteria KEGG: 00300+2.3.1.117 Amir_0772 47125f4655611564c5a43073cdd4d839 324 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 117 156 1.3E-20 T 14-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 Amir_0772 47125f4655611564c5a43073cdd4d839 324 SUPERFAMILY SSF51161 79 302 1.39E-35 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Amir_0772 47125f4655611564c5a43073cdd4d839 324 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 7 321 43.895 T 14-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 Amir_0772 47125f4655611564c5a43073cdd4d839 324 Gene3D G3DSA:3.30.60.70 117 156 4.5E-25 T 14-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 Amir_0772 47125f4655611564c5a43073cdd4d839 324 Gene3D G3DSA:3.30.70.2010 2 116 1.2E-38 T 14-10-2018 Amir_0772 47125f4655611564c5a43073cdd4d839 324 Gene3D G3DSA:2.160.10.10 157 324 3.1E-66 T 14-10-2018 Amir_5605 f7c86551d5b6b9242c674b6c49d69da8 266 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 2.0E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5605 f7c86551d5b6b9242c674b6c49d69da8 266 Pfam PF07702 UTRA domain 111 245 9.8E-18 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Amir_5605 f7c86551d5b6b9242c674b6c49d69da8 266 Gene3D G3DSA:3.40.1410.10 85 247 2.7E-30 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Amir_5605 f7c86551d5b6b9242c674b6c49d69da8 266 SUPERFAMILY SSF64288 60 247 8.64E-26 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Amir_5605 f7c86551d5b6b9242c674b6c49d69da8 266 Gene3D G3DSA:1.10.10.10 2 78 2.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5605 f7c86551d5b6b9242c674b6c49d69da8 266 SUPERFAMILY SSF46785 7 81 1.07E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5605 f7c86551d5b6b9242c674b6c49d69da8 266 SMART SM00866 105 245 9.8E-15 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Amir_5605 f7c86551d5b6b9242c674b6c49d69da8 266 SMART SM00345 13 72 4.0E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_2968 a3fe76e0b35884a3146bc88ed6eda9be 452 Pfam PF00561 alpha/beta hydrolase fold 133 184 3.9E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_2968 a3fe76e0b35884a3146bc88ed6eda9be 452 SUPERFAMILY SSF53474 135 439 6.46E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2968 a3fe76e0b35884a3146bc88ed6eda9be 452 SUPERFAMILY SSF53474 73 420 7.15E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2968 a3fe76e0b35884a3146bc88ed6eda9be 452 Gene3D G3DSA:3.40.50.1820 105 266 6.0E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2968 a3fe76e0b35884a3146bc88ed6eda9be 452 Pfam PF08386 TAP-like protein 362 436 2.3E-9 T 14-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal Amir_2968 a3fe76e0b35884a3146bc88ed6eda9be 452 Gene3D G3DSA:3.40.50.1820 273 443 3.2E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1187 45e2dce5174ffd79f58c33fa2562dac9 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 23.115 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_1187 45e2dce5174ffd79f58c33fa2562dac9 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_1187 45e2dce5174ffd79f58c33fa2562dac9 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 2.0E-26 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_1187 45e2dce5174ffd79f58c33fa2562dac9 103 SUPERFAMILY SSF141091 1 100 1.96E-32 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_1187 45e2dce5174ffd79f58c33fa2562dac9 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 7.0E-35 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0810 7e60d3c0cc26b45f6d3331c209b571c9 396 Gene3D G3DSA:2.40.50.140 289 375 2.4E-26 T 14-10-2018 Amir_0810 7e60d3c0cc26b45f6d3331c209b571c9 396 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0810 7e60d3c0cc26b45f6d3331c209b571c9 396 Gene3D G3DSA:3.40.50.300 6 224 3.7E-66 T 14-10-2018 Amir_0810 7e60d3c0cc26b45f6d3331c209b571c9 396 Pfam PF00005 ABC transporter 23 164 2.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0810 7e60d3c0cc26b45f6d3331c209b571c9 396 Gene3D G3DSA:2.40.50.940 225 384 2.4E-26 T 14-10-2018 Amir_0810 7e60d3c0cc26b45f6d3331c209b571c9 396 SUPERFAMILY SSF50331 239 392 6.24E-18 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Amir_0810 7e60d3c0cc26b45f6d3331c209b571c9 396 SUPERFAMILY SSF52540 6 245 2.0E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0810 7e60d3c0cc26b45f6d3331c209b571c9 396 SMART SM00382 31 214 4.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1809 03ca2d9bf6148a1de477373581d7ad61 784 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 696 746 2.7E-13 T 14-10-2018 IPR005194 Glycoside hydrolase family 65, C-terminal Amir_1809 03ca2d9bf6148a1de477373581d7ad61 784 Gene3D G3DSA:1.50.10.10 317 678 2.1E-125 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Amir_1809 03ca2d9bf6148a1de477373581d7ad61 784 PIRSF PIRSF036289 2 758 3.9E-218 T 14-10-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase Amir_1809 03ca2d9bf6148a1de477373581d7ad61 784 Gene3D G3DSA:2.70.98.40 2 267 6.3E-61 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Amir_1809 03ca2d9bf6148a1de477373581d7ad61 784 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 323 690 1.8E-134 T 14-10-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 Amir_1809 03ca2d9bf6148a1de477373581d7ad61 784 Gene3D G3DSA:2.60.420.10 679 748 2.3E-19 T 14-10-2018 Amir_1809 03ca2d9bf6148a1de477373581d7ad61 784 SUPERFAMILY SSF48208 275 743 6.24E-125 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_1809 03ca2d9bf6148a1de477373581d7ad61 784 SUPERFAMILY SSF74650 4 267 1.04E-61 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Amir_1809 03ca2d9bf6148a1de477373581d7ad61 784 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 14 266 1.9E-64 T 14-10-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 Amir_4660 809593847edfab72efeee7577e7b623a 245 SUPERFAMILY SSF56317 6 233 6.54E-68 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amir_4660 809593847edfab72efeee7577e7b623a 245 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 120 140 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site Amir_4660 809593847edfab72efeee7577e7b623a 245 Gene3D G3DSA:3.60.110.10 2 236 1.8E-75 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amir_4660 809593847edfab72efeee7577e7b623a 245 Pfam PF00795 Carbon-nitrogen hydrolase 9 214 3.9E-46 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Amir_3900 41a9c21c9242aae63beb381d01372b63 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.7E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3900 41a9c21c9242aae63beb381d01372b63 291 Pfam PF03466 LysR substrate binding domain 88 277 4.3E-23 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_3900 41a9c21c9242aae63beb381d01372b63 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3900 41a9c21c9242aae63beb381d01372b63 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3900 41a9c21c9242aae63beb381d01372b63 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3900 41a9c21c9242aae63beb381d01372b63 291 SUPERFAMILY SSF53850 91 278 1.25E-20 T 14-10-2018 Amir_3900 41a9c21c9242aae63beb381d01372b63 291 SUPERFAMILY SSF46785 6 87 2.84E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3900 41a9c21c9242aae63beb381d01372b63 291 Gene3D G3DSA:1.10.10.10 1 87 1.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3900 41a9c21c9242aae63beb381d01372b63 291 Gene3D G3DSA:3.40.190.10 164 254 9.1E-22 T 14-10-2018 Amir_3900 41a9c21c9242aae63beb381d01372b63 291 Gene3D G3DSA:3.40.190.10 105 273 9.1E-22 T 14-10-2018 Amir_6151 c1ea67e6a7b43e03675a0d5d66bbaaaa 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 29.114 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6151 c1ea67e6a7b43e03675a0d5d66bbaaaa 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6151 c1ea67e6a7b43e03675a0d5d66bbaaaa 70 PRINTS PR01249 Ribosomal protein L31 signature 32 47 2.8E-21 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6151 c1ea67e6a7b43e03675a0d5d66bbaaaa 70 PRINTS PR01249 Ribosomal protein L31 signature 47 65 2.8E-21 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6151 c1ea67e6a7b43e03675a0d5d66bbaaaa 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.8E-21 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6151 c1ea67e6a7b43e03675a0d5d66bbaaaa 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 2 67 9.5E-32 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6151 c1ea67e6a7b43e03675a0d5d66bbaaaa 70 Pfam PF01197 Ribosomal protein L31 2 66 9.5E-31 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6151 c1ea67e6a7b43e03675a0d5d66bbaaaa 70 SUPERFAMILY SSF143800 1 66 4.71E-25 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6151 c1ea67e6a7b43e03675a0d5d66bbaaaa 70 Gene3D G3DSA:2.30.170.50 1 70 4.7E-31 T 14-10-2018 Amir_1243 1a725c65ba2fe885123a7a5beea6e83e 244 Gene3D G3DSA:2.40.240.20 1 71 3.3E-23 T 14-10-2018 Amir_1243 1a725c65ba2fe885123a7a5beea6e83e 244 PIRSF PIRSF015601 3 243 1.3E-46 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Amir_1243 1a725c65ba2fe885123a7a5beea6e83e 244 Gene3D G3DSA:3.40.1280.10 72 244 2.3E-53 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Amir_1243 1a725c65ba2fe885123a7a5beea6e83e 244 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 18 239 1.4E-37 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Amir_1243 1a725c65ba2fe885123a7a5beea6e83e 244 Pfam PF04452 RNA methyltransferase 19 236 9.3E-60 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Amir_1243 1a725c65ba2fe885123a7a5beea6e83e 244 SUPERFAMILY SSF75217 72 243 9.42E-43 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Amir_1243 1a725c65ba2fe885123a7a5beea6e83e 244 SUPERFAMILY SSF88697 5 69 1.29E-11 T 14-10-2018 IPR015947 PUA-like superfamily Amir_2188 7f05804300aed4decaa429983e0421ea 203 Pfam PF12079 Protein of unknown function (DUF3558) 15 200 1.6E-22 T 14-10-2018 IPR024520 Protein of unknown function DUF3558 Amir_2104 0f0d02104dcff0bbd6a6d2ef713f3bf2 430 Gene3D G3DSA:3.40.640.10 60 324 4.0E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_2104 0f0d02104dcff0bbd6a6d2ef713f3bf2 430 Gene3D G3DSA:3.90.1150.10 5 420 4.0E-122 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_2104 0f0d02104dcff0bbd6a6d2ef713f3bf2 430 Pfam PF00202 Aminotransferase class-III 25 423 3.3E-85 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_2104 0f0d02104dcff0bbd6a6d2ef713f3bf2 430 SUPERFAMILY SSF53383 16 426 6.52E-109 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_2104 0f0d02104dcff0bbd6a6d2ef713f3bf2 430 PIRSF PIRSF000521 124 427 1.2E-36 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_2104 0f0d02104dcff0bbd6a6d2ef713f3bf2 430 PIRSF PIRSF000521 18 130 4.7E-6 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_1973 45c52ff5917acd7138bf8c33f5328fa1 304 SUPERFAMILY SSF51735 1 99 3.61E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1973 45c52ff5917acd7138bf8c33f5328fa1 304 Gene3D G3DSA:3.40.50.720 2 141 2.1E-21 T 14-10-2018 Amir_1973 45c52ff5917acd7138bf8c33f5328fa1 304 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 94 7.5E-11 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 Amir_3335 90997730b76661fde2fc663b2af73fb2 578 Pfam PF03442 Carbohydrate binding domain X2 395 469 8.2E-14 T 14-10-2018 IPR005102 Carbohydrate binding X2 domain Amir_3335 90997730b76661fde2fc663b2af73fb2 578 Gene3D G3DSA:3.20.20.80 50 380 1.2E-86 T 14-10-2018 Amir_3335 90997730b76661fde2fc663b2af73fb2 578 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 76 354 8.0E-45 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 Amir_3335 90997730b76661fde2fc663b2af73fb2 578 PIRSF PIRSF001043 18 574 6.8E-164 T 14-10-2018 IPR016282 Glycoside hydrolase, family 5, endoglucanase B GO:0016798 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Amir_3335 90997730b76661fde2fc663b2af73fb2 578 SUPERFAMILY SSF51445 24 372 2.39E-61 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_3335 90997730b76661fde2fc663b2af73fb2 578 SUPERFAMILY SSF81296 385 476 1.05E-7 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_6301 46340cae9ce9705fe6470f72d3d693e4 223 Pfam PF01636 Phosphotransferase enzyme family 34 107 2.5E-8 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_6301 46340cae9ce9705fe6470f72d3d693e4 223 Pfam PF01636 Phosphotransferase enzyme family 114 185 2.2E-7 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_6301 46340cae9ce9705fe6470f72d3d693e4 223 Gene3D G3DSA:3.90.1200.10 68 166 9.9E-6 T 14-10-2018 Amir_6301 46340cae9ce9705fe6470f72d3d693e4 223 SUPERFAMILY SSF56112 22 203 3.23E-26 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_4280 3ad1cdba8d0b6b5cb30aec71f2a8680d 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 47 416 2.9E-44 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amir_4280 3ad1cdba8d0b6b5cb30aec71f2a8680d 445 Pfam PF01554 MatE 36 183 3.3E-13 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amir_4280 3ad1cdba8d0b6b5cb30aec71f2a8680d 445 Pfam PF01554 MatE 245 404 2.4E-18 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amir_4280 3ad1cdba8d0b6b5cb30aec71f2a8680d 445 PIRSF PIRSF006603 5 439 2.1E-71 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amir_1071 ed5659ca3a7abaed027e8313750bc854 331 Gene3D G3DSA:1.25.40.10 3 245 5.3E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_1071 ed5659ca3a7abaed027e8313750bc854 331 SUPERFAMILY SSF48452 7 179 1.64E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_1071 ed5659ca3a7abaed027e8313750bc854 331 Pfam PF13432 Tetratricopeptide repeat 148 189 3.2E-4 T 14-10-2018 Amir_1071 ed5659ca3a7abaed027e8313750bc854 331 Pfam PF13432 Tetratricopeptide repeat 23 69 0.002 T 14-10-2018 Amir_1071 ed5659ca3a7abaed027e8313750bc854 331 SMART SM00028 73 106 39.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_1071 ed5659ca3a7abaed027e8313750bc854 331 SMART SM00028 142 175 0.0063 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_1071 ed5659ca3a7abaed027e8313750bc854 331 SMART SM00028 39 72 0.057 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_1071 ed5659ca3a7abaed027e8313750bc854 331 SMART SM00028 5 38 300.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_7034 f91bea71f917d824382eb6a04172b150 838 Gene3D G3DSA:1.10.3810.10 165 355 6.5E-57 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_7034 f91bea71f917d824382eb6a04172b150 838 Gene3D G3DSA:3.40.710.10 364 758 1.9E-100 T 14-10-2018 Amir_7034 f91bea71f917d824382eb6a04172b150 838 Pfam PF00912 Transglycosylase 163 333 1.8E-51 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_7034 f91bea71f917d824382eb6a04172b150 838 Pfam PF00905 Penicillin binding protein transpeptidase domain 431 699 1.1E-19 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Amir_7034 f91bea71f917d824382eb6a04172b150 838 SUPERFAMILY SSF53955 154 353 1.35E-55 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Amir_7034 f91bea71f917d824382eb6a04172b150 838 SUPERFAMILY SSF56601 319 749 7.44E-66 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_6329 c0441a0092837f7580f02278f8167710 150 Pfam PF06262 Zincin-like metallopeptidase 62 147 6.0E-12 T 14-10-2018 IPR010428 Zincin-like metallopeptidase Amir_6329 c0441a0092837f7580f02278f8167710 150 SUPERFAMILY SSF55486 36 148 4.39E-27 T 14-10-2018 Amir_6329 c0441a0092837f7580f02278f8167710 150 Gene3D G3DSA:3.30.2010.20 34 149 6.9E-14 T 14-10-2018 IPR038555 Zincin-like metallopeptidase superfamily Amir_4958 0865a3f229bd466d1bdd55d515845b9b 822 Gene3D G3DSA:3.40.50.2000 469 810 3.2E-55 T 14-10-2018 Amir_4958 0865a3f229bd466d1bdd55d515845b9b 822 Pfam PF13692 Glycosyl transferases group 1 643 778 5.9E-26 T 14-10-2018 Amir_4958 0865a3f229bd466d1bdd55d515845b9b 822 SUPERFAMILY SSF53756 466 814 4.97E-65 T 14-10-2018 Amir_4958 0865a3f229bd466d1bdd55d515845b9b 822 Gene3D G3DSA:3.40.50.2000 629 794 3.2E-55 T 14-10-2018 Amir_4958 0865a3f229bd466d1bdd55d515845b9b 822 Pfam PF13439 Glycosyltransferase Family 4 472 629 4.1E-17 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 SUPERFAMILY SSF48264 60 418 2.49E-83 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 364 373 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 PRINTS PR00385 P450 superfamily signature 371 382 2.8E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 PRINTS PR00385 P450 superfamily signature 362 371 2.8E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 PRINTS PR00385 P450 superfamily signature 260 277 2.8E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 PRINTS PR00385 P450 superfamily signature 295 306 2.8E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 Pfam PF00067 Cytochrome P450 219 392 3.9E-20 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 PRINTS PR00359 B-class P450 signature 218 240 1.7E-44 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 PRINTS PR00359 B-class P450 signature 362 371 1.7E-44 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 PRINTS PR00359 B-class P450 signature 371 382 1.7E-44 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 PRINTS PR00359 B-class P450 signature 312 339 1.7E-44 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 PRINTS PR00359 B-class P450 signature 295 306 1.7E-44 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 PRINTS PR00359 B-class P450 signature 340 355 1.7E-44 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 PRINTS PR00359 B-class P450 signature 112 123 1.7E-44 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 PRINTS PR00359 B-class P450 signature 175 190 1.7E-44 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 PRINTS PR00359 B-class P450 signature 158 174 1.7E-44 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2115 eff1b18812455d31b4b64ef74d0d3b0d 430 Gene3D G3DSA:1.10.630.10 13 426 6.1E-107 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_5146 be84cecf140bd9a12442c51ff44e91fa 373 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 21 299 2.5E-84 T 14-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Amir_5146 be84cecf140bd9a12442c51ff44e91fa 373 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 373 78.228 T 14-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Amir_5146 be84cecf140bd9a12442c51ff44e91fa 373 Gene3D G3DSA:3.30.590.20 15 372 9.8E-112 T 14-10-2018 Amir_5146 be84cecf140bd9a12442c51ff44e91fa 373 SUPERFAMILY SSF55931 18 370 2.55E-91 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amir_5146 be84cecf140bd9a12442c51ff44e91fa 373 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 23 294 2.0E-49 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Amir_6961 489107ece66692f92c65d2b68b2e6f37 533 Pfam PF00474 Sodium:solute symporter family 33 414 2.9E-26 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Amir_6961 489107ece66692f92c65d2b68b2e6f37 533 Gene3D G3DSA:1.20.1730.10 23 504 9.4E-73 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Amir_1754 7b983ab586177269244955dc97a56c30 535 Gene3D G3DSA:3.30.200.20 7 93 8.4E-19 T 14-10-2018 Amir_1754 7b983ab586177269244955dc97a56c30 535 SMART SM00220 15 263 1.8E-42 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_1754 7b983ab586177269244955dc97a56c30 535 Gene3D G3DSA:1.10.510.10 95 270 1.6E-42 T 14-10-2018 Amir_1754 7b983ab586177269244955dc97a56c30 535 Pfam PF00069 Protein kinase domain 18 261 2.0E-38 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_1754 7b983ab586177269244955dc97a56c30 535 SUPERFAMILY SSF56112 12 296 3.51E-64 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_1754 7b983ab586177269244955dc97a56c30 535 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 21 43 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_1754 7b983ab586177269244955dc97a56c30 535 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 133 145 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_6403 d948e7082e6957c35e034f9441d7fcd0 153 Pfam PF13772 AIG2-like family 59 139 5.4E-20 T 14-10-2018 Amir_6403 d948e7082e6957c35e034f9441d7fcd0 153 Gene3D G3DSA:3.10.490.10 2 147 1.8E-40 T 14-10-2018 Amir_6403 d948e7082e6957c35e034f9441d7fcd0 153 SUPERFAMILY SSF110857 3 117 1.96E-17 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 Pfam PF00668 Condensation domain 547 984 5.4E-56 T 14-10-2018 IPR001242 Condensation domain Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 Pfam PF00668 Condensation domain 11 425 4.4E-82 T 14-10-2018 IPR001242 Condensation domain Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 SMART SM00823 Phosphopantetheine attachment site 1483 1552 4.9E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 SMART SM00823 Phosphopantetheine attachment site 454 522 0.41 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 Gene3D G3DSA:3.30.559.30 737 990 2.4E-48 T 14-10-2018 Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 Pfam PF00975 Thioesterase domain 1728 1884 4.4E-11 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 Gene3D G3DSA:3.30.559.10 540 736 7.8E-47 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 SUPERFAMILY SSF53474 1510 1888 3.19E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 SUPERFAMILY SSF52777 185 421 7.89E-53 T 14-10-2018 Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 ProSitePatterns PS00012 Phosphopantetheine attachment site. 478 493 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 Gene3D G3DSA:3.40.50.1820 1474 1616 1.7E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 Pfam PF00550 Phosphopantetheine attachment site 456 515 2.7E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 Pfam PF00550 Phosphopantetheine attachment site 1485 1548 6.3E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 Gene3D G3DSA:3.40.50.1820 1679 1890 1.9E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1022 1398 8.9E-123 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 Gene3D G3DSA:3.30.300.30 1377 1473 1.3E-20 T 14-10-2018 Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 SUPERFAMILY SSF52777 735 990 7.45E-44 T 14-10-2018 Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 SUPERFAMILY SSF56801 965 1495 1.14E-147 T 14-10-2018 Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 SUPERFAMILY SSF52777 9 196 5.23E-46 T 14-10-2018 Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 Pfam PF00501 AMP-binding enzyme 1006 1381 5.7E-96 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 Gene3D G3DSA:1.10.1200.10 438 526 2.9E-20 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 Gene3D G3DSA:3.40.50.12780 997 1376 8.7E-134 T 14-10-2018 Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 Gene3D G3DSA:3.30.559.30 181 421 3.0E-124 T 14-10-2018 Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 SUPERFAMILY SSF52777 544 746 2.33E-38 T 14-10-2018 Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 SUPERFAMILY SSF47336 446 518 2.62E-15 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1507 1522 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 Pfam PF13193 AMP-binding enzyme C-terminal domain 1390 1454 1.7E-6 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1137 1148 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4498 4894d368803e4bccbfba8ca75d816b9c 1892 Gene3D G3DSA:3.30.559.10 11 367 3.0E-124 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_2952 c61e854be83b51d22fe8e17917d33935 207 Gene3D G3DSA:1.10.10.10 95 207 2.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2952 c61e854be83b51d22fe8e17917d33935 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 1.2E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2952 c61e854be83b51d22fe8e17917d33935 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 3.4E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2952 c61e854be83b51d22fe8e17917d33935 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 3.4E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2952 c61e854be83b51d22fe8e17917d33935 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 3.4E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2952 c61e854be83b51d22fe8e17917d33935 207 SMART SM00421 144 201 1.4E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2952 c61e854be83b51d22fe8e17917d33935 207 SUPERFAMILY SSF46894 132 207 8.5E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_5523 bb4a1f5dfc0bb8a3255827e756411d7e 276 SUPERFAMILY SSF53335 32 255 9.56E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_5523 bb4a1f5dfc0bb8a3255827e756411d7e 276 Gene3D G3DSA:3.40.50.150 66 275 5.6E-39 T 14-10-2018 Amir_5523 bb4a1f5dfc0bb8a3255827e756411d7e 276 Pfam PF08241 Methyltransferase domain 79 171 8.2E-19 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_4803 7134c246e392b85d3d931468b803b090 193 Gene3D G3DSA:1.10.357.10 10 188 4.4E-33 T 14-10-2018 Amir_4803 7134c246e392b85d3d931468b803b090 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 60 6.8E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4803 7134c246e392b85d3d931468b803b090 193 SUPERFAMILY SSF46689 2 83 4.0E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4803 7134c246e392b85d3d931468b803b090 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4803 7134c246e392b85d3d931468b803b090 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 4.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1332 267fd37019a0053576cca919872955d2 751 Pfam PF13531 Bacterial extracellular solute-binding protein 285 578 1.3E-9 T 14-10-2018 Amir_0338 ee8e77bf5fcdba1e3e1acb4d2cce2d49 256 Pfam PF02146 Sir2 family 13 169 3.9E-18 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 Amir_0338 ee8e77bf5fcdba1e3e1acb4d2cce2d49 256 Gene3D G3DSA:3.30.1600.10 22 169 8.5E-38 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily Amir_0338 ee8e77bf5fcdba1e3e1acb4d2cce2d49 256 SUPERFAMILY SSF52467 2 254 6.07E-57 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amir_0338 ee8e77bf5fcdba1e3e1acb4d2cce2d49 256 Gene3D G3DSA:3.40.50.1220 7 249 8.5E-38 T 14-10-2018 Amir_6800 baf24663a80bd3b5dc0a77d15d800a54 67 Gene3D G3DSA:2.40.50.140 1 66 2.1E-31 T 14-10-2018 Amir_6800 baf24663a80bd3b5dc0a77d15d800a54 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site Amir_6800 baf24663a80bd3b5dc0a77d15d800a54 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.8E-32 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_6800 baf24663a80bd3b5dc0a77d15d800a54 67 PIRSF PIRSF002599 1 67 3.2E-26 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 Amir_6800 baf24663a80bd3b5dc0a77d15d800a54 67 SUPERFAMILY SSF50249 1 66 1.27E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_6800 baf24663a80bd3b5dc0a77d15d800a54 67 PRINTS PR00050 Cold shock protein signature 4 19 2.3E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_6800 baf24663a80bd3b5dc0a77d15d800a54 67 PRINTS PR00050 Cold shock protein signature 25 34 2.3E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_6800 baf24663a80bd3b5dc0a77d15d800a54 67 PRINTS PR00050 Cold shock protein signature 40 58 2.3E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_6800 baf24663a80bd3b5dc0a77d15d800a54 67 SMART SM00357 3 67 4.2E-31 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Amir_3913 3abb5bc286746bf8d0360eab3d2c863b 258 SUPERFAMILY SSF53335 23 171 1.02E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3913 3abb5bc286746bf8d0360eab3d2c863b 258 Pfam PF13649 Methyltransferase domain 48 152 4.2E-14 T 14-10-2018 Amir_4713 6962981fa056a793419ebd908003a03c 453 Pfam PF05195 Aminopeptidase P, N-terminal domain 50 172 3.1E-16 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 Amir_4713 6962981fa056a793419ebd908003a03c 453 SMART SM01011 44 185 1.5E-21 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 Amir_4713 6962981fa056a793419ebd908003a03c 453 Gene3D G3DSA:3.90.230.10 187 453 5.1E-70 T 14-10-2018 Amir_4713 6962981fa056a793419ebd908003a03c 453 Gene3D G3DSA:3.40.350.10 47 186 8.1E-9 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Amir_4713 6962981fa056a793419ebd908003a03c 453 Pfam PF00557 Metallopeptidase family M24 191 430 2.3E-46 T 14-10-2018 IPR000994 Peptidase M24 Amir_4713 6962981fa056a793419ebd908003a03c 453 SUPERFAMILY SSF55920 185 449 8.9E-60 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Amir_4713 6962981fa056a793419ebd908003a03c 453 SUPERFAMILY SSF53092 50 180 2.35E-18 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Amir_2659 dad8124b420febcf18d40d10b7dee594 79 Pfam PF00550 Phosphopantetheine attachment site 6 72 3.8E-6 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2659 dad8124b420febcf18d40d10b7dee594 79 SUPERFAMILY SSF47336 2 75 1.44E-10 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2659 dad8124b420febcf18d40d10b7dee594 79 Gene3D G3DSA:1.10.1200.10 1 78 1.6E-9 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2442 f3b9fc8e1b8435625dbc289109381351 267 Gene3D G3DSA:3.40.50.80 130 265 5.1E-45 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amir_2442 f3b9fc8e1b8435625dbc289109381351 267 SUPERFAMILY SSF63380 6 133 5.45E-9 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amir_2442 f3b9fc8e1b8435625dbc289109381351 267 Pfam PF04954 Siderophore-interacting protein 134 243 1.3E-33 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain Amir_2442 f3b9fc8e1b8435625dbc289109381351 267 Pfam PF08021 Siderophore-interacting FAD-binding domain 17 127 2.6E-29 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting Amir_2442 f3b9fc8e1b8435625dbc289109381351 267 Gene3D G3DSA:2.40.30.10 3 127 2.8E-28 T 14-10-2018 Amir_5955 f859f34cb4710700b4861128a61daafb 95 SUPERFAMILY SSF54975 7 93 3.49E-24 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Amir_5955 f859f34cb4710700b4861128a61daafb 95 Gene3D G3DSA:3.30.70.100 6 95 4.8E-25 T 14-10-2018 Amir_5955 f859f34cb4710700b4861128a61daafb 95 ProSitePatterns PS00150 Acylphosphatase signature 1. 14 24 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Amir_5955 f859f34cb4710700b4861128a61daafb 95 Pfam PF00708 Acylphosphatase 11 92 5.9E-22 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Amir_1798 7378589bff56f039591169288f38b215 194 Pfam PF09970 Nucleotidyl transferase of unknown function (DUF2204) 10 165 2.3E-5 T 14-10-2018 IPR018700 Protein of unknown function DUF2204 Amir_1798 7378589bff56f039591169288f38b215 194 SUPERFAMILY SSF81301 5 139 1.21E-24 T 14-10-2018 Amir_1798 7378589bff56f039591169288f38b215 194 Gene3D G3DSA:3.30.460.40 2 137 1.7E-13 T 14-10-2018 Amir_7095 3386ec207e66868f9c7e3dfce194fc73 155 PRINTS PR00502 NUDIX hydrolase family signature 50 65 4.3E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_7095 3386ec207e66868f9c7e3dfce194fc73 155 PRINTS PR00502 NUDIX hydrolase family signature 36 50 4.3E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_7095 3386ec207e66868f9c7e3dfce194fc73 155 Pfam PF00293 NUDIX domain 9 130 1.0E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_7095 3386ec207e66868f9c7e3dfce194fc73 155 Gene3D G3DSA:3.90.79.10 1 137 8.0E-32 T 14-10-2018 Amir_7095 3386ec207e66868f9c7e3dfce194fc73 155 SUPERFAMILY SSF55811 5 141 4.06E-30 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_7095 3386ec207e66868f9c7e3dfce194fc73 155 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_5370 9da55e2036775c14f4135438c3036d29 181 Gene3D G3DSA:1.10.10.10 106 176 5.0E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5370 9da55e2036775c14f4135438c3036d29 181 Pfam PF04542 Sigma-70 region 2 21 88 8.9E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5370 9da55e2036775c14f4135438c3036d29 181 Pfam PF04545 Sigma-70, region 4 120 169 6.8E-13 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amir_5370 9da55e2036775c14f4135438c3036d29 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 169 1.0E-26 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_5370 9da55e2036775c14f4135438c3036d29 181 SUPERFAMILY SSF88659 107 171 3.74E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5370 9da55e2036775c14f4135438c3036d29 181 SUPERFAMILY SSF88946 12 96 2.51E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5370 9da55e2036775c14f4135438c3036d29 181 Gene3D G3DSA:1.10.1740.10 4 86 4.3E-20 T 14-10-2018 Amir_4461 a0ed8e119f76221a0d55aef9a30400dc 183 Gene3D G3DSA:1.10.357.10 50 175 1.6E-26 T 14-10-2018 Amir_4461 a0ed8e119f76221a0d55aef9a30400dc 183 SUPERFAMILY SSF48498 77 174 8.34E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4461 a0ed8e119f76221a0d55aef9a30400dc 183 Gene3D G3DSA:1.10.10.60 1 48 1.2E-16 T 14-10-2018 Amir_4461 a0ed8e119f76221a0d55aef9a30400dc 183 SUPERFAMILY SSF46689 3 73 4.16E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5789 dca7b4f5ddc826e430179a3399a843c9 278 Pfam PF13614 AAA domain 3 173 6.9E-32 T 14-10-2018 IPR025669 AAA domain Amir_5789 dca7b4f5ddc826e430179a3399a843c9 278 Gene3D G3DSA:3.40.50.300 1 263 9.3E-61 T 14-10-2018 Amir_5789 dca7b4f5ddc826e430179a3399a843c9 278 SUPERFAMILY SSF52540 2 248 9.72E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3671 1d15b7ea5cd5faa275936a22c08b3998 380 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 174 301 1.6E-22 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Amir_3671 1d15b7ea5cd5faa275936a22c08b3998 380 SUPERFAMILY SSF53756 16 370 9.31E-51 T 14-10-2018 Amir_3671 1d15b7ea5cd5faa275936a22c08b3998 380 Gene3D G3DSA:3.40.50.2000 15 159 5.1E-7 T 14-10-2018 Amir_3671 1d15b7ea5cd5faa275936a22c08b3998 380 Gene3D G3DSA:3.40.50.2000 176 370 1.2E-31 T 14-10-2018 Amir_5702 d211d284d42a528e452ad8a5412696af 271 Pfam PF00218 Indole-3-glycerol phosphate synthase 6 257 2.1E-76 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Amir_5702 d211d284d42a528e452ad8a5412696af 271 SUPERFAMILY SSF51366 14 259 6.69E-77 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Amir_5702 d211d284d42a528e452ad8a5412696af 271 Gene3D G3DSA:3.20.20.70 1 271 3.1E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5702 d211d284d42a528e452ad8a5412696af 271 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 53 70 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 Amir_5702 d211d284d42a528e452ad8a5412696af 271 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 259 32.554 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Amir_4256 c1b5c1ddd5531d568be4bf2d0ecde4fb 339 Gene3D G3DSA:3.30.470.20 110 326 3.6E-41 T 14-10-2018 Amir_4256 c1b5c1ddd5531d568be4bf2d0ecde4fb 339 Gene3D G3DSA:3.30.1490.20 137 197 3.6E-41 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amir_4256 c1b5c1ddd5531d568be4bf2d0ecde4fb 339 SUPERFAMILY SSF56059 121 332 1.26E-34 T 14-10-2018 Amir_4256 c1b5c1ddd5531d568be4bf2d0ecde4fb 339 Pfam PF07478 D-ala D-ala ligase C-terminus 153 330 2.4E-13 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_4256 c1b5c1ddd5531d568be4bf2d0ecde4fb 339 Gene3D G3DSA:3.40.50.20 31 331 3.6E-41 T 14-10-2018 Amir_6124 afc3fe49ed41755441b9f85bea6a93bf 219 Gene3D G3DSA:2.70.180.20 1 89 3.0E-19 T 14-10-2018 Amir_6124 afc3fe49ed41755441b9f85bea6a93bf 219 Pfam PF01939 Endonuclease NucS 1 219 4.5E-82 T 14-10-2018 IPR002793 Endonuclease NucS GO:0004519 Amir_6124 afc3fe49ed41755441b9f85bea6a93bf 219 Gene3D G3DSA:3.40.1350.10 94 205 3.3E-26 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Amir_6124 afc3fe49ed41755441b9f85bea6a93bf 219 Hamap MF_00722 Endonuclease NucS [nucS]. 1 211 31.341 T 14-10-2018 IPR002793 Endonuclease NucS GO:0004519 Amir_5216 cf541e429f8c96022e9826fb533fa09b 158 Pfam PF10756 Bacterial PH domain 81 151 8.0E-21 T 14-10-2018 IPR019692 Protein of unknown function DUF2581 Amir_4658 1b6d96261b2b00f1ff319b9941af009e 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 68 79 3.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4658 1b6d96261b2b00f1ff319b9941af009e 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 160 3.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4658 1b6d96261b2b00f1ff319b9941af009e 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_4658 1b6d96261b2b00f1ff319b9941af009e 257 Gene3D G3DSA:3.40.50.720 1 238 2.3E-70 T 14-10-2018 Amir_4658 1b6d96261b2b00f1ff319b9941af009e 257 SUPERFAMILY SSF51735 2 233 1.12E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4658 1b6d96261b2b00f1ff319b9941af009e 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 230 3.9E-57 T 14-10-2018 Amir_4658 1b6d96261b2b00f1ff319b9941af009e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 1.0E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4658 1b6d96261b2b00f1ff319b9941af009e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 1.0E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4658 1b6d96261b2b00f1ff319b9941af009e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 215 1.0E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4658 1b6d96261b2b00f1ff319b9941af009e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.0E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4658 1b6d96261b2b00f1ff319b9941af009e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 1.0E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4658 1b6d96261b2b00f1ff319b9941af009e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 1.0E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0555 c6875153b7e2f614ffaae5c9f3cd216f 478 SUPERFAMILY SSF52540 45 200 4.5E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2117 8631f320ea84722fb0ee712c6907bdc1 362 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 3.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2117 8631f320ea84722fb0ee712c6907bdc1 362 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 3.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2117 8631f320ea84722fb0ee712c6907bdc1 362 SUPERFAMILY SSF46689 6 72 1.33E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2117 8631f320ea84722fb0ee712c6907bdc1 362 Gene3D G3DSA:1.10.357.10 5 166 6.0E-20 T 14-10-2018 Amir_2117 8631f320ea84722fb0ee712c6907bdc1 362 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 4.0E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1091 1e6083937b902597865148cde9f7edaa 515 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 310 9.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Amir_1091 1e6083937b902597865148cde9f7edaa 515 PRINTS PR00738 Glycosyl hydrolase family 20 signature 185 206 9.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Amir_1091 1e6083937b902597865148cde9f7edaa 515 PRINTS PR00738 Glycosyl hydrolase family 20 signature 460 477 9.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Amir_1091 1e6083937b902597865148cde9f7edaa 515 PRINTS PR00738 Glycosyl hydrolase family 20 signature 442 458 9.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Amir_1091 1e6083937b902597865148cde9f7edaa 515 PRINTS PR00738 Glycosyl hydrolase family 20 signature 314 327 9.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Amir_1091 1e6083937b902597865148cde9f7edaa 515 PRINTS PR00738 Glycosyl hydrolase family 20 signature 244 261 9.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Amir_1091 1e6083937b902597865148cde9f7edaa 515 PRINTS PR00738 Glycosyl hydrolase family 20 signature 156 173 9.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Amir_1091 1e6083937b902597865148cde9f7edaa 515 PRINTS PR00738 Glycosyl hydrolase family 20 signature 114 134 9.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Amir_1091 1e6083937b902597865148cde9f7edaa 515 SUPERFAMILY SSF51445 162 508 2.77E-108 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1091 1e6083937b902597865148cde9f7edaa 515 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 26 158 5.5E-19 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal Amir_1091 1e6083937b902597865148cde9f7edaa 515 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 162 328 1.7E-58 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Amir_1091 1e6083937b902597865148cde9f7edaa 515 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 335 478 6.6E-26 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Amir_1091 1e6083937b902597865148cde9f7edaa 515 Gene3D G3DSA:3.30.379.10 27 161 1.9E-171 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 Amir_1091 1e6083937b902597865148cde9f7edaa 515 Gene3D G3DSA:3.20.20.80 162 502 1.9E-171 T 14-10-2018 Amir_1091 1e6083937b902597865148cde9f7edaa 515 SUPERFAMILY SSF55545 19 161 1.44E-25 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 Amir_2807 fa6eae17300a5168431c5d672017ddb5 155 Pfam PF13466 STAS domain 60 138 2.8E-9 T 14-10-2018 IPR002645 STAS domain Amir_2807 fa6eae17300a5168431c5d672017ddb5 155 Gene3D G3DSA:3.30.750.24 42 155 8.5E-21 T 14-10-2018 IPR036513 STAS domain superfamily Amir_2807 fa6eae17300a5168431c5d672017ddb5 155 SUPERFAMILY SSF52091 51 152 4.91E-13 T 14-10-2018 IPR036513 STAS domain superfamily Amir_0328 eb8c167d5f27e6d7f01230deaed0fcfb 259 Gene3D G3DSA:3.40.50.150 16 255 7.4E-40 T 14-10-2018 Amir_0328 eb8c167d5f27e6d7f01230deaed0fcfb 259 Pfam PF08241 Methyltransferase domain 52 141 5.8E-18 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_0328 eb8c167d5f27e6d7f01230deaed0fcfb 259 SUPERFAMILY SSF53335 17 190 6.6E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_4806 e58bc2a7d43f638fa996d0a0e1edf94d 785 Gene3D G3DSA:1.50.10.10 121 447 5.1E-24 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Amir_4806 e58bc2a7d43f638fa996d0a0e1edf94d 785 Pfam PF00754 F5/8 type C domain 556 680 8.3E-10 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain Amir_4806 e58bc2a7d43f638fa996d0a0e1edf94d 785 SUPERFAMILY SSF48208 92 460 4.56E-35 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_4806 e58bc2a7d43f638fa996d0a0e1edf94d 785 Gene3D G3DSA:2.60.120.260 545 693 2.6E-27 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_4806 e58bc2a7d43f638fa996d0a0e1edf94d 785 SUPERFAMILY SSF49785 555 677 2.41E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_3140 b40bbb9e9cb721757e0b79d5407fc68b 230 Pfam PF13305 WHG domain 89 146 4.1E-6 T 14-10-2018 IPR025996 WHG domain Amir_3140 b40bbb9e9cb721757e0b79d5407fc68b 230 Gene3D G3DSA:1.10.357.10 1 183 6.0E-27 T 14-10-2018 Amir_3140 b40bbb9e9cb721757e0b79d5407fc68b 230 SUPERFAMILY SSF48498 79 156 6.67E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3140 b40bbb9e9cb721757e0b79d5407fc68b 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 6.3E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3140 b40bbb9e9cb721757e0b79d5407fc68b 230 SUPERFAMILY SSF46689 2 66 1.9E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3747 5f9bfb91bface4e7d08e36937c1ef1a6 484 Gene3D G3DSA:3.50.50.60 150 223 4.2E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3747 5f9bfb91bface4e7d08e36937c1ef1a6 484 Gene3D G3DSA:3.50.50.60 1 149 9.4E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3747 5f9bfb91bface4e7d08e36937c1ef1a6 484 SUPERFAMILY SSF51905 264 464 1.13E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3747 5f9bfb91bface4e7d08e36937c1ef1a6 484 Pfam PF00743 Flavin-binding monooxygenase-like 7 207 4.0E-14 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 Amir_3747 5f9bfb91bface4e7d08e36937c1ef1a6 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 4.6E-8 T 14-10-2018 Amir_3747 5f9bfb91bface4e7d08e36937c1ef1a6 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.6E-8 T 14-10-2018 Amir_3747 5f9bfb91bface4e7d08e36937c1ef1a6 484 SUPERFAMILY SSF51905 3 225 7.02E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3747 5f9bfb91bface4e7d08e36937c1ef1a6 484 Gene3D G3DSA:3.50.50.60 316 482 1.0E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0245 8a058c1ca3af13b22a6e010e78f6be0b 296 Gene3D G3DSA:3.30.360.10 137 294 4.4E-8 T 14-10-2018 Amir_0245 8a058c1ca3af13b22a6e010e78f6be0b 296 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 123 1.9E-17 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amir_0245 8a058c1ca3af13b22a6e010e78f6be0b 296 SUPERFAMILY SSF51735 5 145 1.12E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0245 8a058c1ca3af13b22a6e010e78f6be0b 296 Gene3D G3DSA:3.40.50.720 3 136 3.7E-33 T 14-10-2018 Amir_0245 8a058c1ca3af13b22a6e010e78f6be0b 296 SUPERFAMILY SSF55347 137 246 1.22E-7 T 14-10-2018 Amir_3740 01d1a9a4c47f996a32670e4439a2f0ab 616 SUPERFAMILY SSF47384 208 294 2.55E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_3740 01d1a9a4c47f996a32670e4439a2f0ab 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 4.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_3740 01d1a9a4c47f996a32670e4439a2f0ab 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 4.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_3740 01d1a9a4c47f996a32670e4439a2f0ab 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 451 4.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_3740 01d1a9a4c47f996a32670e4439a2f0ab 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 407 4.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_3740 01d1a9a4c47f996a32670e4439a2f0ab 616 Gene3D G3DSA:3.30.565.10 292 458 8.5E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3740 01d1a9a4c47f996a32670e4439a2f0ab 616 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 453 1.2E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_3740 01d1a9a4c47f996a32670e4439a2f0ab 616 SUPERFAMILY SSF55874 282 453 2.75E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3740 01d1a9a4c47f996a32670e4439a2f0ab 616 Gene3D G3DSA:1.10.287.130 188 291 1.2E-19 T 14-10-2018 Amir_3740 01d1a9a4c47f996a32670e4439a2f0ab 616 Pfam PF00072 Response regulator receiver domain 464 557 1.2E-5 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3740 01d1a9a4c47f996a32670e4439a2f0ab 616 SMART SM00388 225 293 1.3E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_3740 01d1a9a4c47f996a32670e4439a2f0ab 616 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 293 6.5E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_3740 01d1a9a4c47f996a32670e4439a2f0ab 616 SMART SM00387 339 454 2.3E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_3740 01d1a9a4c47f996a32670e4439a2f0ab 616 SUPERFAMILY SSF52172 463 559 5.27E-12 T 14-10-2018 IPR011006 CheY-like superfamily Amir_3740 01d1a9a4c47f996a32670e4439a2f0ab 616 Gene3D G3DSA:3.40.50.12740 461 604 8.2E-11 T 14-10-2018 Amir_6352 eeea21cb2e5a04c30c6f3029574e2004 120 SUPERFAMILY SSF46785 4 102 1.44E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6352 eeea21cb2e5a04c30c6f3029574e2004 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 6.3E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_6352 eeea21cb2e5a04c30c6f3029574e2004 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 6.3E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_6352 eeea21cb2e5a04c30c6f3029574e2004 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 6.3E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_6352 eeea21cb2e5a04c30c6f3029574e2004 120 Gene3D G3DSA:1.10.10.10 3 104 1.4E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6352 eeea21cb2e5a04c30c6f3029574e2004 120 SMART SM00418 8 86 2.6E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_6352 eeea21cb2e5a04c30c6f3029574e2004 120 Pfam PF12840 Helix-turn-helix domain 9 63 3.7E-16 T 14-10-2018 Amir_5384 c9543ed34de348a3db9d11ba9dd4d9c4 602 SUPERFAMILY SSF69279 33 176 3.4E-13 T 14-10-2018 Amir_5384 c9543ed34de348a3db9d11ba9dd4d9c4 602 Pfam PF05954 Phage late control gene D protein (GPD) 60 345 5.0E-7 T 14-10-2018 Amir_5384 c9543ed34de348a3db9d11ba9dd4d9c4 602 Gene3D G3DSA:2.40.50.230 366 454 4.0E-16 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily Amir_5384 c9543ed34de348a3db9d11ba9dd4d9c4 602 SUPERFAMILY SSF69255 376 450 3.27E-18 T 14-10-2018 Amir_5376 35070fa22ffd1a4abe22dcca3c52290a 213 SUPERFAMILY SSF46894 146 213 1.36E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_5376 35070fa22ffd1a4abe22dcca3c52290a 213 Gene3D G3DSA:1.10.10.10 98 213 6.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5376 35070fa22ffd1a4abe22dcca3c52290a 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.6E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5376 35070fa22ffd1a4abe22dcca3c52290a 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.6E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5376 35070fa22ffd1a4abe22dcca3c52290a 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.6E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5376 35070fa22ffd1a4abe22dcca3c52290a 213 SMART SM00421 150 207 2.4E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5376 35070fa22ffd1a4abe22dcca3c52290a 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 2.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5732 5dcd29c9d4c0061768d41084f94d1088 226 Gene3D G3DSA:2.30.130.40 2 117 2.3E-33 T 14-10-2018 Amir_5732 5dcd29c9d4c0061768d41084f94d1088 226 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 4 200 8.5E-20 T 14-10-2018 IPR003111 Lon, substrate-binding domain Amir_5732 5dcd29c9d4c0061768d41084f94d1088 226 SMART SM00464 4 201 2.3E-13 T 14-10-2018 IPR003111 Lon, substrate-binding domain Amir_5732 5dcd29c9d4c0061768d41084f94d1088 226 SUPERFAMILY SSF88697 4 199 1.86E-38 T 14-10-2018 IPR015947 PUA-like superfamily Amir_1423 923e5dcc84f823980500e26d36896d22 623 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 508 519 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amir_1423 923e5dcc84f823980500e26d36896d22 623 SUPERFAMILY SSF52016 422 604 7.53E-57 T 14-10-2018 Amir_1423 923e5dcc84f823980500e26d36896d22 623 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 4 606 58.501 T 14-10-2018 Amir_1423 923e5dcc84f823980500e26d36896d22 623 SUPERFAMILY SSF143975 4 421 2.75E-141 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amir_1423 923e5dcc84f823980500e26d36896d22 623 Pfam PF00920 Dehydratase family 69 602 1.0E-160 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amir_1423 923e5dcc84f823980500e26d36896d22 623 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 5 605 3.0E-294 T 14-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 Amir_1423 923e5dcc84f823980500e26d36896d22 623 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 158 168 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amir_1423 923e5dcc84f823980500e26d36896d22 623 Gene3D G3DSA:3.50.30.80 422 571 1.4E-50 T 14-10-2018 Amir_4101 7084ceba7f7dbebdc20f3f25d3a4cf63 328 Pfam PF08012 Protein of unknown function (DUF1702) 5 322 1.1E-132 T 14-10-2018 IPR012964 Protein of unknown function DUF1702 Amir_2635 5afe1e46b53bdd4a12844c3bfa2ec2ea 322 Pfam PF00107 Zinc-binding dehydrogenase 149 264 3.2E-34 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_2635 5afe1e46b53bdd4a12844c3bfa2ec2ea 322 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 138 159 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Amir_2635 5afe1e46b53bdd4a12844c3bfa2ec2ea 322 SMART SM00829 10 320 8.8E-48 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_2635 5afe1e46b53bdd4a12844c3bfa2ec2ea 322 SUPERFAMILY SSF51735 109 267 4.35E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2635 5afe1e46b53bdd4a12844c3bfa2ec2ea 322 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 88 2.9E-9 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_2635 5afe1e46b53bdd4a12844c3bfa2ec2ea 322 Gene3D G3DSA:3.40.50.720 121 266 4.4E-99 T 14-10-2018 Amir_2635 5afe1e46b53bdd4a12844c3bfa2ec2ea 322 SUPERFAMILY SSF50129 1 142 3.2E-35 T 14-10-2018 IPR011032 GroES-like superfamily Amir_2635 5afe1e46b53bdd4a12844c3bfa2ec2ea 322 Gene3D G3DSA:3.90.180.10 10 320 4.4E-99 T 14-10-2018 Amir_5653 00e34f01f8987089d7cc498cdcdb81c0 419 SUPERFAMILY SSF56300 193 415 6.29E-40 T 14-10-2018 Amir_5653 00e34f01f8987089d7cc498cdcdb81c0 419 Pfam PF00149 Calcineurin-like phosphoesterase 193 357 4.9E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amir_5653 00e34f01f8987089d7cc498cdcdb81c0 419 Gene3D G3DSA:3.60.21.10 192 388 4.3E-22 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Amir_2222 dafbb00c32f2381a167a701c23a25600 297 SUPERFAMILY SSF52980 44 204 1.39E-9 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Amir_2222 dafbb00c32f2381a167a701c23a25600 297 Gene3D G3DSA:3.90.320.10 19 232 6.8E-8 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Amir_2222 dafbb00c32f2381a167a701c23a25600 297 Pfam PF12705 PD-(D/E)XK nuclease superfamily 24 270 1.3E-38 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Amir_3613 02804fda305c1e62d17125d6e2f0d596 565 Gene3D G3DSA:3.50.50.60 8 174 7.9E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3613 02804fda305c1e62d17125d6e2f0d596 565 Pfam PF00890 FAD binding domain 11 43 1.8E-6 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_3613 02804fda305c1e62d17125d6e2f0d596 565 Gene3D G3DSA:3.50.50.60 182 323 8.2E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3613 02804fda305c1e62d17125d6e2f0d596 565 Gene3D G3DSA:3.50.50.60 411 519 6.4E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3613 02804fda305c1e62d17125d6e2f0d596 565 SUPERFAMILY SSF51905 7 518 1.16E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3613 02804fda305c1e62d17125d6e2f0d596 565 Pfam PF00732 GMC oxidoreductase 188 277 1.7E-7 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Amir_3613 02804fda305c1e62d17125d6e2f0d596 565 Pfam PF05199 GMC oxidoreductase 460 513 3.5E-13 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Amir_5518 2edaae06e4686b0438d032cf05e3a12f 181 Gene3D G3DSA:2.40.380.10 6 175 1.5E-66 T 14-10-2018 IPR035930 FomD-like superfamily Amir_5518 2edaae06e4686b0438d032cf05e3a12f 181 SUPERFAMILY SSF159234 15 179 8.11E-47 T 14-10-2018 IPR035930 FomD-like superfamily Amir_5518 2edaae06e4686b0438d032cf05e3a12f 181 Pfam PF04167 Protein of unknown function (DUF402) 65 130 1.3E-13 T 14-10-2018 IPR007295 Domain of unknown function DUF402 Amir_5636 f239eaf196927029708e208154bfd1cb 481 Gene3D G3DSA:2.60.120.260 182 317 1.1E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_6011 6f6286204aa8f58dca3875964d8fcf3e 256 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 59 252 6.9E-62 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Amir_6011 6f6286204aa8f58dca3875964d8fcf3e 256 SUPERFAMILY SSF56529 51 253 1.96E-75 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Amir_6011 6f6286204aa8f58dca3875964d8fcf3e 256 Gene3D G3DSA:3.90.850.10 56 255 4.2E-80 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Amir_6011 6f6286204aa8f58dca3875964d8fcf3e 256 Gene3D G3DSA:2.30.30.370 1 54 2.1E-28 T 14-10-2018 Amir_6011 6f6286204aa8f58dca3875964d8fcf3e 256 Pfam PF10370 Domain of unknown function (DUF2437) 2 54 1.6E-14 T 14-10-2018 IPR018833 Domain of unknown function DUF2437 Amir_5774 2ed76f765325c5b64b677cf65dd1d70c 316 Gene3D G3DSA:3.40.50.150 7 308 3.7E-90 T 14-10-2018 Amir_5774 2ed76f765325c5b64b677cf65dd1d70c 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 312 36.301 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Amir_5774 2ed76f765325c5b64b677cf65dd1d70c 316 SUPERFAMILY SSF53335 7 312 2.0E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_5774 2ed76f765325c5b64b677cf65dd1d70c 316 SUPERFAMILY SSF81799 116 217 4.45E-32 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Amir_5774 2ed76f765325c5b64b677cf65dd1d70c 316 PIRSF PIRSF004486 1 313 1.5E-91 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Amir_5774 2ed76f765325c5b64b677cf65dd1d70c 316 Pfam PF01795 MraW methylase family 5 311 1.2E-108 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Amir_5774 2ed76f765325c5b64b677cf65dd1d70c 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 311 1.0E-87 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Amir_5774 2ed76f765325c5b64b677cf65dd1d70c 316 Gene3D G3DSA:1.10.150.170 114 219 3.7E-90 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Amir_2170 989166e55444447c496ec449d2c2b929 532 SUPERFAMILY SSF53850 76 527 8.83E-55 T 14-10-2018 Amir_2170 989166e55444447c496ec449d2c2b929 532 Pfam PF13416 Bacterial extracellular solute-binding protein 101 350 9.5E-12 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_5484 a0bd146bf71c4b4a6e7ccf521bc49219 239 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 11 222 7.5E-30 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type Amir_5484 a0bd146bf71c4b4a6e7ccf521bc49219 239 Gene3D G3DSA:1.20.120.450 2 154 3.8E-46 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_5484 a0bd146bf71c4b4a6e7ccf521bc49219 239 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 12 147 4.4E-26 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 Amir_5484 a0bd146bf71c4b4a6e7ccf521bc49219 239 Gene3D G3DSA:3.30.1050.20 155 239 3.1E-7 T 14-10-2018 Amir_5484 a0bd146bf71c4b4a6e7ccf521bc49219 239 SUPERFAMILY SSF55718 156 238 6.71E-14 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Amir_5484 a0bd146bf71c4b4a6e7ccf521bc49219 239 SUPERFAMILY SSF109854 7 154 3.3E-40 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_5530 64da88cb1059e1a8212d08354a30cbf4 411 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 213 2.3E-18 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Amir_5530 64da88cb1059e1a8212d08354a30cbf4 411 SUPERFAMILY SSF55347 127 321 5.63E-25 T 14-10-2018 Amir_5530 64da88cb1059e1a8212d08354a30cbf4 411 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 121 5.6E-18 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amir_5530 64da88cb1059e1a8212d08354a30cbf4 411 SUPERFAMILY SSF51735 3 153 3.43E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5530 64da88cb1059e1a8212d08354a30cbf4 411 Gene3D G3DSA:3.40.50.720 2 124 7.5E-23 T 14-10-2018 Amir_3541 d2696321ad4270ced89b0a0278e1268c 345 SMART SM01003 6 140 1.4E-23 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Amir_3541 d2696321ad4270ced89b0a0278e1268c 345 SUPERFAMILY SSF52283 5 327 5.02E-26 T 14-10-2018 Amir_3541 d2696321ad4270ced89b0a0278e1268c 345 SMART SM01002 168 294 2.8E-4 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Amir_3541 d2696321ad4270ced89b0a0278e1268c 345 Gene3D G3DSA:3.40.50.720 133 302 8.1E-112 T 14-10-2018 Amir_3541 d2696321ad4270ced89b0a0278e1268c 345 Gene3D G3DSA:3.40.50.720 5 333 8.1E-112 T 14-10-2018 Amir_3541 d2696321ad4270ced89b0a0278e1268c 345 PIRSF PIRSF018250 1 343 3.1E-121 T 14-10-2018 IPR027281 Saccharopine dehydrogenase [NAD(+), L-lysine-forming] GO:0004754|GO:0009085 KEGG: 00300+1.5.1.7|KEGG: 00310+1.5.1.7 Amir_3541 d2696321ad4270ced89b0a0278e1268c 345 SUPERFAMILY SSF51735 171 300 7.31E-10 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3541 d2696321ad4270ced89b0a0278e1268c 345 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 6 139 6.7E-23 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Amir_6291 c1a426bc7186e5e8fe7998e2a28ad72c 130 Pfam PF13490 Putative zinc-finger 11 44 9.9E-5 T 14-10-2018 IPR027383 Putative zinc-finger Amir_6291 c1a426bc7186e5e8fe7998e2a28ad72c 130 TIGRFAM TIGR02949 anti_SigH_actin: anti-sigma factor, TIGR02949 family 4 84 1.3E-26 T 14-10-2018 IPR014295 Anti-sigma factor Amir_6291 c1a426bc7186e5e8fe7998e2a28ad72c 130 TIGRFAM TIGR03988 antisig_RsrA: mycothiol system anti-sigma-R factor 10 84 2.3E-29 T 14-10-2018 IPR024020 Anti sigma-R factor, mycothiol system,RsrA Amir_3532 c6408a5383d53fd508f9ca5452c9edb3 257 Gene3D G3DSA:3.40.50.80 132 255 2.2E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amir_3532 c6408a5383d53fd508f9ca5452c9edb3 257 Gene3D G3DSA:2.40.30.10 1 127 5.6E-35 T 14-10-2018 Amir_3532 c6408a5383d53fd508f9ca5452c9edb3 257 Pfam PF08021 Siderophore-interacting FAD-binding domain 6 127 1.6E-33 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting Amir_3532 c6408a5383d53fd508f9ca5452c9edb3 257 SUPERFAMILY SSF63380 3 128 6.05E-11 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amir_3532 c6408a5383d53fd508f9ca5452c9edb3 257 Pfam PF04954 Siderophore-interacting protein 135 236 2.0E-25 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain Amir_0729 c0041c5ee0e6ea191975265b6249a5fe 314 Gene3D G3DSA:3.40.1010.20 8 281 2.4E-110 T 14-10-2018 Amir_0729 c0041c5ee0e6ea191975265b6249a5fe 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 5 284 1.2E-98 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Amir_0729 c0041c5ee0e6ea191975265b6249a5fe 314 Gene3D G3DSA:3.40.50.11270 14 98 2.4E-110 T 14-10-2018 Amir_0729 c0041c5ee0e6ea191975265b6249a5fe 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 3 286 37.271 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Amir_0729 c0041c5ee0e6ea191975265b6249a5fe 314 Pfam PF02401 LytB protein 5 282 4.1E-90 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Amir_0729 c0041c5ee0e6ea191975265b6249a5fe 314 Gene3D G3DSA:3.40.1010.20 99 195 2.4E-110 T 14-10-2018 Amir_5015 5cecca631cf0cd0cf9aaa8e913991369 137 Pfam PF13279 Thioesterase-like superfamily 14 131 5.1E-15 T 14-10-2018 Amir_5015 5cecca631cf0cd0cf9aaa8e913991369 137 Gene3D G3DSA:3.10.129.10 1 134 3.0E-44 T 14-10-2018 Amir_5015 5cecca631cf0cd0cf9aaa8e913991369 137 SUPERFAMILY SSF54637 3 135 2.75E-37 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 SUPERFAMILY SSF54211 601 775 3.38E-49 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 358 493 4.4E-20 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 SMART SM00464 6 197 9.4E-17 T 14-10-2018 IPR003111 Lon, substrate-binding domain Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 678 697 3.4E-49 T 14-10-2018 Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 731 749 3.4E-49 T 14-10-2018 Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 708 727 3.4E-49 T 14-10-2018 Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 601 617 3.4E-49 T 14-10-2018 Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 361 380 3.4E-49 T 14-10-2018 Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 TIGRFAM TIGR00763 lon: endopeptidase La 8 776 2.4E-239 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 Gene3D G3DSA:3.40.50.300 310 495 8.8E-59 T 14-10-2018 Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 7 194 1.7E-17 T 14-10-2018 IPR003111 Lon, substrate-binding domain Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 SMART SM00382 353 506 3.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 PIRSF PIRSF001174 2 780 1.3E-243 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 SUPERFAMILY SSF88697 7 194 5.22E-19 T 14-10-2018 IPR015947 PUA-like superfamily Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 Gene3D G3DSA:3.30.230.10 594 785 3.9E-72 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 Gene3D G3DSA:1.20.58.1480 121 240 7.1E-21 T 14-10-2018 Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 Hamap MF_01973 Lon protease [lon]. 7 777 58.487 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 681 689 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 SUPERFAMILY SSF52540 305 561 1.91E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 Gene3D G3DSA:2.30.130.40 2 111 8.4E-9 T 14-10-2018 Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 Gene3D G3DSA:1.10.8.60 496 590 1.0E-23 T 14-10-2018 Amir_5873 a4cf88fd047c524a889676fc4ee99f62 785 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 576 777 4.9E-76 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Amir_5016 7d84c027b38f58479223dae81143426a 468 Gene3D G3DSA:2.60.120.10 86 225 5.4E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_5016 7d84c027b38f58479223dae81143426a 468 Pfam PF00027 Cyclic nucleotide-binding domain 113 197 2.4E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_5016 7d84c027b38f58479223dae81143426a 468 SUPERFAMILY SSF51206 85 212 8.12E-20 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Amir_5016 7d84c027b38f58479223dae81143426a 468 SMART SM00100 93 219 1.9E-4 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_6478 984ecac17896480c3ec1c5cc2e47dd23 406 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 3 405 6.7E-208 T 14-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Amir_6478 984ecac17896480c3ec1c5cc2e47dd23 406 Gene3D G3DSA:3.40.718.10 1 406 3.0E-219 T 14-10-2018 Amir_6478 984ecac17896480c3ec1c5cc2e47dd23 406 PIRSF PIRSF000108 1 406 2.1E-222 T 14-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Amir_6478 984ecac17896480c3ec1c5cc2e47dd23 406 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 10 390 3.5E-71 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Amir_6478 984ecac17896480c3ec1c5cc2e47dd23 406 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 271 290 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Amir_6478 984ecac17896480c3ec1c5cc2e47dd23 406 SUPERFAMILY SSF53659 2 404 5.04E-150 T 14-10-2018 Amir_6478 984ecac17896480c3ec1c5cc2e47dd23 406 SMART SM01329 9 396 3.5E-134 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Amir_4379 33d8af1ce7dd11c626cc5df86360f74c 557 Pfam PF00348 Polyprenyl synthetase 259 495 3.1E-51 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Amir_4379 33d8af1ce7dd11c626cc5df86360f74c 557 Gene3D G3DSA:1.10.600.10 223 557 2.0E-85 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_4379 33d8af1ce7dd11c626cc5df86360f74c 557 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 306 320 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Amir_4379 33d8af1ce7dd11c626cc5df86360f74c 557 SUPERFAMILY SSF48576 237 556 3.04E-76 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_6203 866aab5e45f29a6daaa164a585ef6e9c 239 SUPERFAMILY SSF81606 4 237 3.01E-61 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_6203 866aab5e45f29a6daaa164a585ef6e9c 239 SMART SM00331 10 236 1.1E-24 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_6203 866aab5e45f29a6daaa164a585ef6e9c 239 Gene3D G3DSA:3.60.40.10 1 238 1.4E-61 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_6203 866aab5e45f29a6daaa164a585ef6e9c 239 SMART SM00332 1 234 2.6E-21 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_6203 866aab5e45f29a6daaa164a585ef6e9c 239 Pfam PF13672 Protein phosphatase 2C 9 194 9.3E-12 T 14-10-2018 Amir_6946 2724d3492a1931aac52f1123195f5bf2 143 Gene3D G3DSA:1.10.1660.10 9 127 7.1E-20 T 14-10-2018 Amir_6946 2724d3492a1931aac52f1123195f5bf2 143 SUPERFAMILY SSF46955 17 109 1.83E-18 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_6946 2724d3492a1931aac52f1123195f5bf2 143 ProSitePatterns PS00552 MerR-type HTH domain signature. 19 41 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6946 2724d3492a1931aac52f1123195f5bf2 143 Pfam PF13411 MerR HTH family regulatory protein 18 83 1.3E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6946 2724d3492a1931aac52f1123195f5bf2 143 SMART SM00422 16 85 1.1E-20 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_1521 ca61495295df5347825a4480af9e50f2 220 SUPERFAMILY SSF51735 2 139 1.75E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1521 ca61495295df5347825a4480af9e50f2 220 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 6.4E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Amir_1521 ca61495295df5347825a4480af9e50f2 220 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 6.4E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Amir_1521 ca61495295df5347825a4480af9e50f2 220 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 6.4E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Amir_1521 ca61495295df5347825a4480af9e50f2 220 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 6.4E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Amir_1521 ca61495295df5347825a4480af9e50f2 220 SUPERFAMILY SSF116726 146 210 1.7E-6 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amir_1521 ca61495295df5347825a4480af9e50f2 220 Gene3D G3DSA:3.30.70.1450 144 212 1.1E-5 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amir_1521 ca61495295df5347825a4480af9e50f2 220 Pfam PF02254 TrkA-N domain 3 116 1.3E-24 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Amir_1521 ca61495295df5347825a4480af9e50f2 220 Pfam PF02080 TrkA-C domain 148 211 1.6E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Amir_1521 ca61495295df5347825a4480af9e50f2 220 Gene3D G3DSA:3.40.50.720 2 123 6.3E-30 T 14-10-2018 Amir_1137 e8e2e9020c1c3ded21bb3efdee1c770d 705 SUPERFAMILY SSF50993 12 426 1.88E-71 T 14-10-2018 Amir_1137 e8e2e9020c1c3ded21bb3efdee1c770d 705 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 471 489 4.3E-42 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Amir_1137 e8e2e9020c1c3ded21bb3efdee1c770d 705 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 521 4.3E-42 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Amir_1137 e8e2e9020c1c3ded21bb3efdee1c770d 705 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 610 625 4.3E-42 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Amir_1137 e8e2e9020c1c3ded21bb3efdee1c770d 705 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 525 544 4.3E-42 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Amir_1137 e8e2e9020c1c3ded21bb3efdee1c770d 705 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 629 651 4.3E-42 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Amir_1137 e8e2e9020c1c3ded21bb3efdee1c770d 705 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 555 575 4.3E-42 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Amir_1137 e8e2e9020c1c3ded21bb3efdee1c770d 705 Gene3D G3DSA:2.130.10.120 82 432 4.2E-210 T 14-10-2018 Amir_1137 e8e2e9020c1c3ded21bb3efdee1c770d 705 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 17 426 3.5E-74 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 Amir_1137 e8e2e9020c1c3ded21bb3efdee1c770d 705 Pfam PF00326 Prolyl oligopeptidase family 492 701 1.5E-50 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Amir_1137 e8e2e9020c1c3ded21bb3efdee1c770d 705 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 532 562 - T 14-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 Amir_1137 e8e2e9020c1c3ded21bb3efdee1c770d 705 Gene3D G3DSA:3.40.50.1820 23 697 4.2E-210 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1137 e8e2e9020c1c3ded21bb3efdee1c770d 705 SUPERFAMILY SSF53474 441 697 6.97E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0905 f4c943e4e860a602d70f126b0da322ea 191 Gene3D G3DSA:3.40.50.1820 1 188 2.2E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0905 f4c943e4e860a602d70f126b0da322ea 191 Pfam PF12697 Alpha/beta hydrolase family 1 181 1.3E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_0905 f4c943e4e860a602d70f126b0da322ea 191 SUPERFAMILY SSF53474 1 185 3.04E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5270 da3420df5e38fa96680275e7cff7ab68 314 Pfam PF06999 Sucrase/ferredoxin-like 25 218 8.7E-14 T 14-10-2018 IPR009737 Thioredoxin-like ferredoxin Amir_5270 da3420df5e38fa96680275e7cff7ab68 314 SUPERFAMILY SSF52833 137 220 6.26E-6 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_3869 71031a32fc456acca6c63ae54bfc5376 337 SUPERFAMILY SSF52266 37 320 2.0E-56 T 14-10-2018 Amir_3869 71031a32fc456acca6c63ae54bfc5376 337 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 41 311 1.7E-24 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_3869 71031a32fc456acca6c63ae54bfc5376 337 Gene3D G3DSA:3.40.50.1110 33 321 5.5E-68 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_5903 d019ea946a0ecd57a1d7b3cf156592b4 316 Gene3D G3DSA:1.10.10.10 166 274 4.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5903 d019ea946a0ecd57a1d7b3cf156592b4 316 SUPERFAMILY SSF46785 162 248 1.3E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5903 d019ea946a0ecd57a1d7b3cf156592b4 316 Pfam PF03551 Transcriptional regulator PadR-like family 177 246 2.7E-19 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal Amir_1488 978e4938e8ca34abdf56ef8b1a885294 418 SUPERFAMILY SSF51604 133 385 1.9E-70 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_1488 978e4938e8ca34abdf56ef8b1a885294 418 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 32 133 8.5E-6 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Amir_1488 978e4938e8ca34abdf56ef8b1a885294 418 Gene3D G3DSA:3.20.20.120 133 374 6.0E-179 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_1488 978e4938e8ca34abdf56ef8b1a885294 418 SMART SM00922 167 261 2.6E-18 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Amir_1488 978e4938e8ca34abdf56ef8b1a885294 418 Pfam PF13378 Enolase C-terminal domain-like 171 381 1.8E-52 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Amir_1488 978e4938e8ca34abdf56ef8b1a885294 418 SUPERFAMILY SSF54826 1 133 6.89E-27 T 14-10-2018 Amir_1488 978e4938e8ca34abdf56ef8b1a885294 418 Gene3D G3DSA:3.30.390.10 3 411 6.0E-179 T 14-10-2018 IPR029017 Enolase-like, N-terminal Amir_3129 0e9e5f2d535b88614fabb63b6e95b4d1 245 Gene3D G3DSA:2.40.30.10 63 117 8.6E-10 T 14-10-2018 Amir_3129 0e9e5f2d535b88614fabb63b6e95b4d1 245 Pfam PF08021 Siderophore-interacting FAD-binding domain 69 116 3.7E-6 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting Amir_3129 0e9e5f2d535b88614fabb63b6e95b4d1 245 SUPERFAMILY SSF63380 13 117 1.7E-9 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amir_3129 0e9e5f2d535b88614fabb63b6e95b4d1 245 Gene3D G3DSA:3.40.50.80 120 244 1.5E-5 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amir_0907 e853b509b4f96dc9540959c612845488 521 Pfam PF00561 alpha/beta hydrolase fold 110 497 1.1E-49 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_0907 e853b509b4f96dc9540959c612845488 521 SUPERFAMILY SSF53474 95 496 2.59E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3948 782c0ef053f31432ebadbc8bea782417 524 Pfam PF07690 Major Facilitator Superfamily 26 422 4.4E-46 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_3948 782c0ef053f31432ebadbc8bea782417 524 PRINTS PR01036 Tetracycline resistance protein TetB signature 116 136 6.3E-11 T 14-10-2018 Amir_3948 782c0ef053f31432ebadbc8bea782417 524 PRINTS PR01036 Tetracycline resistance protein TetB signature 25 49 6.3E-11 T 14-10-2018 Amir_3948 782c0ef053f31432ebadbc8bea782417 524 PRINTS PR01036 Tetracycline resistance protein TetB signature 146 170 6.3E-11 T 14-10-2018 Amir_3948 782c0ef053f31432ebadbc8bea782417 524 PRINTS PR01036 Tetracycline resistance protein TetB signature 413 432 6.3E-11 T 14-10-2018 Amir_3948 782c0ef053f31432ebadbc8bea782417 524 SUPERFAMILY SSF103473 14 508 6.41E-65 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_3948 782c0ef053f31432ebadbc8bea782417 524 Gene3D G3DSA:1.20.1720.10 23 236 1.1E-45 T 14-10-2018 Amir_2803 76a1139b187ae5a59d4fdb6e5bb00aef 387 Pfam PF00534 Glycosyl transferases group 1 197 346 7.4E-29 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Amir_2803 76a1139b187ae5a59d4fdb6e5bb00aef 387 SUPERFAMILY SSF53756 26 375 1.3E-67 T 14-10-2018 Amir_2803 76a1139b187ae5a59d4fdb6e5bb00aef 387 Gene3D G3DSA:3.40.50.2000 177 354 3.3E-80 T 14-10-2018 Amir_2803 76a1139b187ae5a59d4fdb6e5bb00aef 387 Pfam PF13579 Glycosyl transferase 4-like domain 26 176 1.5E-22 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amir_2803 76a1139b187ae5a59d4fdb6e5bb00aef 387 Gene3D G3DSA:3.40.50.2000 25 371 3.3E-80 T 14-10-2018 Amir_4665 6dc8436a01977e62f4aba54395c30b0b 126 Gene3D G3DSA:3.10.180.10 1 124 1.0E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_4665 6dc8436a01977e62f4aba54395c30b0b 126 SUPERFAMILY SSF54593 1 120 1.2E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_6939 c19dce67287aafee1c97d6bc3d700312 302 SUPERFAMILY SSF140453 64 114 1.83E-6 T 14-10-2018 IPR036689 ESAT-6-like superfamily Amir_6939 c19dce67287aafee1c97d6bc3d700312 302 Gene3D G3DSA:1.10.287.1060 59 146 9.5E-6 T 14-10-2018 Amir_2688 2ca7a764da0cc50aac4f671d3f35fa70 529 SUPERFAMILY SSF56801 13 525 1.83E-127 T 14-10-2018 Amir_2688 2ca7a764da0cc50aac4f671d3f35fa70 529 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_2688 2ca7a764da0cc50aac4f671d3f35fa70 529 Gene3D G3DSA:3.40.50.12780 10 424 5.5E-93 T 14-10-2018 Amir_2688 2ca7a764da0cc50aac4f671d3f35fa70 529 Pfam PF00501 AMP-binding enzyme 24 432 8.2E-83 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_2688 2ca7a764da0cc50aac4f671d3f35fa70 529 Gene3D G3DSA:3.30.300.30 425 528 7.8E-29 T 14-10-2018 Amir_2688 2ca7a764da0cc50aac4f671d3f35fa70 529 Pfam PF13193 AMP-binding enzyme C-terminal domain 440 516 3.3E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_0367 83c71f083b32ba201efb4f9fc47a77b5 284 Pfam PF13560 Helix-turn-helix domain 7 87 2.0E-18 T 14-10-2018 Amir_0367 83c71f083b32ba201efb4f9fc47a77b5 284 Gene3D G3DSA:3.30.450.180 111 278 1.6E-16 T 14-10-2018 Amir_0367 83c71f083b32ba201efb4f9fc47a77b5 284 SUPERFAMILY SSF47413 32 80 1.05E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_0367 83c71f083b32ba201efb4f9fc47a77b5 284 SMART SM00530 7 84 8.1E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_0367 83c71f083b32ba201efb4f9fc47a77b5 284 Gene3D G3DSA:1.10.260.40 5 86 2.8E-7 T 14-10-2018 Amir_2274 3680bee76e72f8d3a6a8e3d35294e83a 374 Pfam PF01882 Protein of unknown function DUF58 189 264 2.3E-16 T 14-10-2018 IPR002881 Domain of unknown function DUF58 Amir_6181 ec73ac8638abdd63b6fc58e5db6d5889 707 Gene3D G3DSA:2.70.98.60 81 276 2.0E-34 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_6181 ec73ac8638abdd63b6fc58e5db6d5889 707 SUPERFAMILY SSF51445 291 621 3.86E-95 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_6181 ec73ac8638abdd63b6fc58e5db6d5889 707 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 23 244 1.8E-43 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_6181 ec73ac8638abdd63b6fc58e5db6d5889 707 Gene3D G3DSA:3.20.20.70 278 590 1.7E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_6181 ec73ac8638abdd63b6fc58e5db6d5889 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 372 394 5.3E-46 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_6181 ec73ac8638abdd63b6fc58e5db6d5889 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 428 443 5.3E-46 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_6181 ec73ac8638abdd63b6fc58e5db6d5889 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 478 494 5.3E-46 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_6181 ec73ac8638abdd63b6fc58e5db6d5889 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 259 279 5.3E-46 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_6181 ec73ac8638abdd63b6fc58e5db6d5889 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 294 308 5.3E-46 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_6181 ec73ac8638abdd63b6fc58e5db6d5889 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 322 337 5.3E-46 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_6181 ec73ac8638abdd63b6fc58e5db6d5889 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 208 223 5.3E-46 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_6181 ec73ac8638abdd63b6fc58e5db6d5889 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 503 519 5.3E-46 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_6181 ec73ac8638abdd63b6fc58e5db6d5889 707 PIRSF PIRSF005536 82 666 2.5E-171 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_6181 ec73ac8638abdd63b6fc58e5db6d5889 707 Pfam PF02065 Melibiase 257 592 1.2E-114 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_5832 d7a1520bd6a3c97e443c8a2d9de74a5f 149 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 Amir_5832 d7a1520bd6a3c97e443c8a2d9de74a5f 149 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 1.0E-25 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Amir_5832 d7a1520bd6a3c97e443c8a2d9de74a5f 149 Pfam PF02033 Ribosome-binding factor A 6 113 1.4E-25 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Amir_5832 d7a1520bd6a3c97e443c8a2d9de74a5f 149 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 113 24.026 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Amir_5832 d7a1520bd6a3c97e443c8a2d9de74a5f 149 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 114 2.2E-22 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Amir_5832 d7a1520bd6a3c97e443c8a2d9de74a5f 149 Gene3D G3DSA:3.30.300.20 3 120 3.0E-25 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Amir_5832 d7a1520bd6a3c97e443c8a2d9de74a5f 149 SUPERFAMILY SSF89919 3 116 5.23E-28 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Amir_3399 f13bef107f0e90d621c85cea40e3eedd 117 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 5.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_3399 f13bef107f0e90d621c85cea40e3eedd 117 SMART SM00345 16 75 3.5E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_3399 f13bef107f0e90d621c85cea40e3eedd 117 SUPERFAMILY SSF46785 5 92 2.73E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3399 f13bef107f0e90d621c85cea40e3eedd 117 Gene3D G3DSA:1.10.10.10 9 117 2.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2333 5fb244ea787e77a7c0d3b750220bd63b 250 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 170 240 1.6E-26 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) Amir_2333 5fb244ea787e77a7c0d3b750220bd63b 250 PRINTS PR00956 Flagellar motor switch protein FliN signature 187 203 1.3E-25 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Amir_2333 5fb244ea787e77a7c0d3b750220bd63b 250 PRINTS PR00956 Flagellar motor switch protein FliN signature 216 231 1.3E-25 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Amir_2333 5fb244ea787e77a7c0d3b750220bd63b 250 PRINTS PR00956 Flagellar motor switch protein FliN signature 170 186 1.3E-25 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Amir_2333 5fb244ea787e77a7c0d3b750220bd63b 250 PRINTS PR00956 Flagellar motor switch protein FliN signature 203 216 1.3E-25 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Amir_2333 5fb244ea787e77a7c0d3b750220bd63b 250 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 169 241 7.4E-29 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 Amir_2333 5fb244ea787e77a7c0d3b750220bd63b 250 SUPERFAMILY SSF101801 168 244 7.59E-24 T 14-10-2018 IPR036429 SpoA-like superfamily Amir_2333 5fb244ea787e77a7c0d3b750220bd63b 250 Gene3D G3DSA:2.30.330.10 159 249 2.7E-32 T 14-10-2018 IPR036429 SpoA-like superfamily Amir_5144 0cd7f849abe36dcc45af20221b644422 359 SUPERFAMILY SSF51905 1 284 7.2E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5144 0cd7f849abe36dcc45af20221b644422 359 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 5.6E-6 T 14-10-2018 Amir_5144 0cd7f849abe36dcc45af20221b644422 359 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 117 126 5.6E-6 T 14-10-2018 Amir_5144 0cd7f849abe36dcc45af20221b644422 359 Gene3D G3DSA:3.50.50.60 2 123 1.0E-9 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5144 0cd7f849abe36dcc45af20221b644422 359 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 6.4E-5 T 14-10-2018 Amir_5144 0cd7f849abe36dcc45af20221b644422 359 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 132 6.4E-5 T 14-10-2018 Amir_5144 0cd7f849abe36dcc45af20221b644422 359 Pfam PF05834 Lycopene cyclase protein 2 342 1.7E-52 T 14-10-2018 Amir_5144 0cd7f849abe36dcc45af20221b644422 359 TIGRFAM TIGR01790 carotene-cycl: lycopene cyclase family protein 2 345 1.7E-62 T 14-10-2018 IPR010108 Lycopene cyclase, beta/epsilon GO:0016117|GO:0016705 Amir_1173 4adf2b7d7ae31b47b952289b029006e9 306 Gene3D G3DSA:3.40.50.300 2 237 5.1E-69 T 14-10-2018 Amir_1173 4adf2b7d7ae31b47b952289b029006e9 306 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_1173 4adf2b7d7ae31b47b952289b029006e9 306 Pfam PF00005 ABC transporter 22 164 2.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1173 4adf2b7d7ae31b47b952289b029006e9 306 SUPERFAMILY SSF52540 4 228 2.66E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1173 4adf2b7d7ae31b47b952289b029006e9 306 SMART SM00382 30 213 5.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0057 aad15a7530f4abda0122323b2dc798c4 791 Pfam PF00534 Glycosyl transferases group 1 552 673 1.5E-15 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Amir_0057 aad15a7530f4abda0122323b2dc798c4 791 SUPERFAMILY SSF53756 457 738 3.05E-34 T 14-10-2018 Amir_0057 aad15a7530f4abda0122323b2dc798c4 791 Gene3D G3DSA:3.40.50.2000 541 743 1.3E-36 T 14-10-2018 Amir_0870 6a9b91f444a6e675ef048c2fd7c36063 389 TIGRFAM TIGR02678 TIGR02678: TIGR02678 family protein 17 357 6.7E-39 T 14-10-2018 IPR013494 Conserved hypothetical protein CHP02678 Amir_0870 6a9b91f444a6e675ef048c2fd7c36063 389 Pfam PF09661 Protein of unknown function (DUF2398) 17 359 3.9E-93 T 14-10-2018 IPR013494 Conserved hypothetical protein CHP02678 Amir_1349 ba4abbbe0cf008ca9cf863758dc8e086 297 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 290 6.0E-94 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 Amir_1349 ba4abbbe0cf008ca9cf863758dc8e086 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 210 3.4E-12 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_1349 ba4abbbe0cf008ca9cf863758dc8e086 297 SUPERFAMILY SSF51735 1 282 6.13E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1349 ba4abbbe0cf008ca9cf863758dc8e086 297 Gene3D G3DSA:3.40.50.720 1 283 3.8E-75 T 14-10-2018 Amir_1349 ba4abbbe0cf008ca9cf863758dc8e086 297 Pfam PF08338 Domain of unknown function (DUF1731) 246 292 7.2E-15 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 Amir_6294 ef22c9045fc3bbdb2e976d980fe3c234 204 Gene3D G3DSA:3.40.50.1820 22 198 8.8E-17 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6294 ef22c9045fc3bbdb2e976d980fe3c234 204 SUPERFAMILY SSF53474 5 200 2.67E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4502 99fb5b7eefa30490eb1e53ade7db6cc9 71 Pfam PF03621 MbtH-like protein 4 51 1.2E-21 T 14-10-2018 IPR005153 MbtH-like domain Amir_4502 99fb5b7eefa30490eb1e53ade7db6cc9 71 SUPERFAMILY SSF160582 3 69 3.01E-28 T 14-10-2018 IPR038020 MbtH-like domain superfamily Amir_4502 99fb5b7eefa30490eb1e53ade7db6cc9 71 Gene3D G3DSA:3.90.820.10 2 70 4.9E-31 T 14-10-2018 Amir_4502 99fb5b7eefa30490eb1e53ade7db6cc9 71 SMART SM00923 2 52 5.7E-22 T 14-10-2018 IPR005153 MbtH-like domain Amir_5197 e6f64a1b19f1afcdc6663a63580966e3 261 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 244 9.3E-54 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5197 e6f64a1b19f1afcdc6663a63580966e3 261 Pfam PF00121 Triosephosphate isomerase 6 251 1.0E-85 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5197 e6f64a1b19f1afcdc6663a63580966e3 261 ProSitePatterns PS00171 Triosephosphate isomerase active site. 170 180 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5197 e6f64a1b19f1afcdc6663a63580966e3 261 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 254 58.304 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5197 e6f64a1b19f1afcdc6663a63580966e3 261 Gene3D G3DSA:3.20.20.70 1 261 3.4E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5197 e6f64a1b19f1afcdc6663a63580966e3 261 SUPERFAMILY SSF51351 2 253 4.45E-88 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_6986 97c7f91a70a90ca25c86093b1eb8aefa 271 SMART SM00062 46 267 1.8E-62 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_6986 97c7f91a70a90ca25c86093b1eb8aefa 271 SMART SM00079 47 266 0.001 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Amir_6986 97c7f91a70a90ca25c86093b1eb8aefa 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 266 9.2E-61 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_6986 97c7f91a70a90ca25c86093b1eb8aefa 271 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 68 81 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site Amir_6986 97c7f91a70a90ca25c86093b1eb8aefa 271 Gene3D G3DSA:3.40.190.10 50 264 1.1E-61 T 14-10-2018 Amir_6986 97c7f91a70a90ca25c86093b1eb8aefa 271 Gene3D G3DSA:3.40.190.10 133 225 1.1E-61 T 14-10-2018 Amir_6986 97c7f91a70a90ca25c86093b1eb8aefa 271 SUPERFAMILY SSF53850 12 267 6.44E-62 T 14-10-2018 Amir_0081 15b32b69a7c9e9b8a3a12c7e8cc4b642 343 ProDom PD320837 DEHYDRATASE PHENYLACETALDOXIME ALDOXIME LYASE METAL-BINDING IRON HEME TRUNCATION DIRECT 4.2.1.- 15 338 4.0E-40 T 14-10-2018 IPR025702 Haem-containing dehydratase KEGG: 00460+4.99.1.7|KEGG: 00643+4.99.1.7|MetaCyc: PWY-7824 Amir_0081 15b32b69a7c9e9b8a3a12c7e8cc4b642 343 Pfam PF13816 Haem-containing dehydratase 40 337 1.1E-74 T 14-10-2018 IPR025702 Haem-containing dehydratase KEGG: 00460+4.99.1.7|KEGG: 00643+4.99.1.7|MetaCyc: PWY-7824 Amir_0081 15b32b69a7c9e9b8a3a12c7e8cc4b642 343 SUPERFAMILY SSF54909 38 109 5.85E-5 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_0206 ebc82534243e02bee32eae34ca4894c9 561 SUPERFAMILY SSF53850 45 557 1.57E-113 T 14-10-2018 Amir_0206 ebc82534243e02bee32eae34ca4894c9 561 Gene3D G3DSA:3.40.190.10 234 549 1.4E-132 T 14-10-2018 Amir_0206 ebc82534243e02bee32eae34ca4894c9 561 Gene3D G3DSA:3.10.105.10 315 536 1.4E-132 T 14-10-2018 Amir_0206 ebc82534243e02bee32eae34ca4894c9 561 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 89 478 1.6E-79 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Amir_0206 ebc82534243e02bee32eae34ca4894c9 561 Gene3D G3DSA:3.90.76.10 60 233 1.4E-132 T 14-10-2018 Amir_0206 ebc82534243e02bee32eae34ca4894c9 561 PIRSF PIRSF002741 5 560 8.1E-96 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amir_6256 d93ead55c64b9238cf190db15d3eea9d 334 Pfam PF00248 Aldo/keto reductase family 19 316 1.2E-70 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_6256 d93ead55c64b9238cf190db15d3eea9d 334 Gene3D G3DSA:3.20.20.100 4 327 1.5E-107 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_6256 d93ead55c64b9238cf190db15d3eea9d 334 SUPERFAMILY SSF51430 5 317 4.71E-94 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_2438 a5ddbf09f4d59c6f87501188e3b0e69c 405 Gene3D G3DSA:3.60.21.10 1 242 2.0E-41 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Amir_2438 a5ddbf09f4d59c6f87501188e3b0e69c 405 PIRSF PIRSF033091 1 404 1.4E-93 T 14-10-2018 IPR014576 Predicted phosphoesterase, YhaO type Amir_2438 a5ddbf09f4d59c6f87501188e3b0e69c 405 SUPERFAMILY SSF56300 1 278 1.12E-48 T 14-10-2018 Amir_2438 a5ddbf09f4d59c6f87501188e3b0e69c 405 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 233 5.4E-14 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Amir_3536 a95193bb4cabfc872754081b5a70eef6 389 SUPERFAMILY SSF49899 206 337 1.02E-5 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_3536 a95193bb4cabfc872754081b5a70eef6 389 SUPERFAMILY SSF49384 34 137 6.56E-27 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_3536 a95193bb4cabfc872754081b5a70eef6 389 SMART SM00637 38 136 2.4E-38 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_3536 a95193bb4cabfc872754081b5a70eef6 389 Gene3D G3DSA:2.60.40.290 32 138 1.1E-31 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_3536 a95193bb4cabfc872754081b5a70eef6 389 Gene3D G3DSA:2.60.120.200 170 389 9.5E-61 T 14-10-2018 Amir_3536 a95193bb4cabfc872754081b5a70eef6 389 Pfam PF00553 Cellulose binding domain 38 136 8.1E-28 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_1445 9a8045cb642aa87c893e96541ec7eeec 307 Pfam PF16868 NMT1-like family 30 304 2.2E-50 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Amir_1445 9a8045cb642aa87c893e96541ec7eeec 307 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 4 305 2.1E-63 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Amir_1445 9a8045cb642aa87c893e96541ec7eeec 307 SUPERFAMILY SSF53850 27 304 7.87E-57 T 14-10-2018 Amir_1445 9a8045cb642aa87c893e96541ec7eeec 307 Gene3D G3DSA:3.40.190.10 30 304 4.0E-70 T 14-10-2018 Amir_1445 9a8045cb642aa87c893e96541ec7eeec 307 Gene3D G3DSA:3.40.190.10 106 243 4.0E-70 T 14-10-2018 Amir_3571 d0927094552663a71973c0131763f6d8 954 SUPERFAMILY SSF48452 724 929 2.48E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3571 d0927094552663a71973c0131763f6d8 954 Gene3D G3DSA:3.40.50.300 279 436 1.1E-24 T 14-10-2018 Amir_3571 d0927094552663a71973c0131763f6d8 954 Pfam PF03704 Bacterial transcriptional activator domain 108 251 1.7E-42 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_3571 d0927094552663a71973c0131763f6d8 954 SUPERFAMILY SSF52540 283 546 2.86E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3571 d0927094552663a71973c0131763f6d8 954 SMART SM00028 819 852 26.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_3571 d0927094552663a71973c0131763f6d8 954 SMART SM00028 899 932 3.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_3571 d0927094552663a71973c0131763f6d8 954 SMART SM00028 859 892 36.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_3571 d0927094552663a71973c0131763f6d8 954 SMART SM01043 108 252 1.6E-44 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_3571 d0927094552663a71973c0131763f6d8 954 Gene3D G3DSA:1.10.10.10 4 104 4.3E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3571 d0927094552663a71973c0131763f6d8 954 SUPERFAMILY SSF46894 13 101 2.18E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_3571 d0927094552663a71973c0131763f6d8 954 SMART SM00862 25 101 9.5E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_3571 d0927094552663a71973c0131763f6d8 954 Gene3D G3DSA:1.25.40.10 105 278 1.2E-43 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3571 d0927094552663a71973c0131763f6d8 954 Pfam PF00486 Transcriptional regulatory protein, C terminal 35 101 3.6E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_3571 d0927094552663a71973c0131763f6d8 954 Pfam PF13374 Tetratricopeptide repeat 902 932 0.0014 T 14-10-2018 Amir_3571 d0927094552663a71973c0131763f6d8 954 Pfam PF00931 NB-ARC domain 314 545 4.2E-17 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 Amir_3571 d0927094552663a71973c0131763f6d8 954 SUPERFAMILY SSF48452 104 267 4.93E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3571 d0927094552663a71973c0131763f6d8 954 Pfam PF13424 Tetratricopeptide repeat 819 890 1.0E-12 T 14-10-2018 Amir_3571 d0927094552663a71973c0131763f6d8 954 PRINTS PR00364 Disease resistance protein signature 395 409 7.9E-10 T 14-10-2018 Amir_3571 d0927094552663a71973c0131763f6d8 954 PRINTS PR00364 Disease resistance protein signature 317 332 7.9E-10 T 14-10-2018 Amir_3571 d0927094552663a71973c0131763f6d8 954 PRINTS PR00364 Disease resistance protein signature 480 494 7.9E-10 T 14-10-2018 Amir_3571 d0927094552663a71973c0131763f6d8 954 Gene3D G3DSA:1.25.40.10 698 952 3.5E-36 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_7063 0cdd4f3dd0c8c0acabfdad6dc4486d72 344 Gene3D G3DSA:3.40.50.720 153 286 3.6E-104 T 14-10-2018 Amir_7063 0cdd4f3dd0c8c0acabfdad6dc4486d72 344 Pfam PF00107 Zinc-binding dehydrogenase 174 299 6.2E-21 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_7063 0cdd4f3dd0c8c0acabfdad6dc4486d72 344 SUPERFAMILY SSF50129 2 173 3.04E-51 T 14-10-2018 IPR011032 GroES-like superfamily Amir_7063 0cdd4f3dd0c8c0acabfdad6dc4486d72 344 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 56.093 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 Amir_7063 0cdd4f3dd0c8c0acabfdad6dc4486d72 344 SMART SM00829 10 338 0.0022 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_7063 0cdd4f3dd0c8c0acabfdad6dc4486d72 344 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 1.2E-31 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_7063 0cdd4f3dd0c8c0acabfdad6dc4486d72 344 SUPERFAMILY SSF51735 142 296 9.6E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_7063 0cdd4f3dd0c8c0acabfdad6dc4486d72 344 Gene3D G3DSA:3.90.180.10 21 328 3.6E-104 T 14-10-2018 Amir_7063 0cdd4f3dd0c8c0acabfdad6dc4486d72 344 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amir_2480 3f24321d9ac6f02b154adb898cc61ccd 238 Pfam PF13490 Putative zinc-finger 5 39 1.9E-7 T 14-10-2018 IPR027383 Putative zinc-finger Amir_6449 ddc2e6e9481318f3d84551a27efb74d8 424 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 335 406 5.7E-20 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_6449 ddc2e6e9481318f3d84551a27efb74d8 424 Pfam PF00591 Glycosyl transferase family, a/b domain 78 285 2.4E-33 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_6449 ddc2e6e9481318f3d84551a27efb74d8 424 Gene3D G3DSA:3.90.1170.30 320 405 2.0E-132 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_6449 ddc2e6e9481318f3d84551a27efb74d8 424 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 111 126 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_6449 ddc2e6e9481318f3d84551a27efb74d8 424 SMART SM00941 334 408 5.0E-28 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_6449 ddc2e6e9481318f3d84551a27efb74d8 424 SUPERFAMILY SSF54680 321 422 5.76E-24 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_6449 ddc2e6e9481318f3d84551a27efb74d8 424 PIRSF PIRSF000478 2 423 1.7E-149 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_6449 ddc2e6e9481318f3d84551a27efb74d8 424 Gene3D G3DSA:1.20.970.10 3 69 9.1E-23 T 14-10-2018 Amir_6449 ddc2e6e9481318f3d84551a27efb74d8 424 SUPERFAMILY SSF47648 4 71 5.49E-20 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_6449 ddc2e6e9481318f3d84551a27efb74d8 424 SUPERFAMILY SSF52418 74 316 3.53E-81 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_6449 ddc2e6e9481318f3d84551a27efb74d8 424 Gene3D G3DSA:3.40.1030.10 78 319 2.0E-132 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_6449 ddc2e6e9481318f3d84551a27efb74d8 424 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 68 4.8E-18 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_6449 ddc2e6e9481318f3d84551a27efb74d8 424 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 6 406 2.8E-164 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_4603 352dc5cc7fb9b1a525cd7582d5ecc756 769 SUPERFAMILY SSF51735 480 736 4.48E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4603 352dc5cc7fb9b1a525cd7582d5ecc756 769 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 551 562 1.2E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4603 352dc5cc7fb9b1a525cd7582d5ecc756 769 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 479 496 1.2E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4603 352dc5cc7fb9b1a525cd7582d5ecc756 769 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 652 669 1.2E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4603 352dc5cc7fb9b1a525cd7582d5ecc756 769 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 605 621 1.2E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4603 352dc5cc7fb9b1a525cd7582d5ecc756 769 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 631 650 1.2E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4603 352dc5cc7fb9b1a525cd7582d5ecc756 769 SUPERFAMILY SSF52777 9 187 5.11E-16 T 14-10-2018 Amir_4603 352dc5cc7fb9b1a525cd7582d5ecc756 769 Pfam PF00106 short chain dehydrogenase 479 672 8.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4603 352dc5cc7fb9b1a525cd7582d5ecc756 769 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 611 619 2.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4603 352dc5cc7fb9b1a525cd7582d5ecc756 769 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 631 650 2.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4603 352dc5cc7fb9b1a525cd7582d5ecc756 769 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 551 562 2.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4603 352dc5cc7fb9b1a525cd7582d5ecc756 769 SUPERFAMILY SSF52777 217 453 2.0E-24 T 14-10-2018 Amir_4603 352dc5cc7fb9b1a525cd7582d5ecc756 769 Gene3D G3DSA:3.40.50.720 479 762 3.5E-62 T 14-10-2018 Amir_4603 352dc5cc7fb9b1a525cd7582d5ecc756 769 Gene3D G3DSA:3.30.559.10 7 191 5.5E-17 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_5908 d4445520c9e81ce3e6ff17c9d48c3b3d 185 Pfam PF01765 Ribosome recycling factor 21 183 5.8E-58 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Amir_5908 d4445520c9e81ce3e6ff17c9d48c3b3d 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 4.4E-63 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Amir_5908 d4445520c9e81ce3e6ff17c9d48c3b3d 185 SUPERFAMILY SSF55194 3 184 1.7E-66 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Amir_5908 d4445520c9e81ce3e6ff17c9d48c3b3d 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.529 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Amir_5908 d4445520c9e81ce3e6ff17c9d48c3b3d 185 Gene3D G3DSA:1.10.132.20 12 182 1.2E-63 T 14-10-2018 Amir_5908 d4445520c9e81ce3e6ff17c9d48c3b3d 185 Gene3D G3DSA:3.30.1360.40 31 105 1.2E-63 T 14-10-2018 Amir_5244 9714dbf4821bc22dcd6f54596dccd8c6 433 Gene3D G3DSA:2.30.40.10 9 424 5.1E-129 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_5244 9714dbf4821bc22dcd6f54596dccd8c6 433 ProSitePatterns PS00483 Dihydroorotase signature 2. 305 316 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5244 9714dbf4821bc22dcd6f54596dccd8c6 433 Hamap MF_00220_B Dihydroorotase [pyrC]. 4 428 42.051 T 14-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5244 9714dbf4821bc22dcd6f54596dccd8c6 433 SUPERFAMILY SSF51338 14 431 1.85E-21 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_5244 9714dbf4821bc22dcd6f54596dccd8c6 433 Gene3D G3DSA:3.20.20.140 58 371 5.1E-129 T 14-10-2018 Amir_5244 9714dbf4821bc22dcd6f54596dccd8c6 433 SUPERFAMILY SSF51556 57 370 6.05E-95 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_5244 9714dbf4821bc22dcd6f54596dccd8c6 433 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 16 426 7.0E-135 T 14-10-2018 Amir_5244 9714dbf4821bc22dcd6f54596dccd8c6 433 Pfam PF01979 Amidohydrolase family 53 424 8.4E-22 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_2733 f412cdd7e97ce9cab8ba3a0bf5eadd28 70 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 1.9E-18 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_2733 f412cdd7e97ce9cab8ba3a0bf5eadd28 70 SUPERFAMILY SSF47413 2 68 2.06E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2733 f412cdd7e97ce9cab8ba3a0bf5eadd28 70 Gene3D G3DSA:1.10.260.40 4 68 5.5E-9 T 14-10-2018 Amir_2733 f412cdd7e97ce9cab8ba3a0bf5eadd28 70 SMART SM00530 6 62 1.4E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_4729 81ea8745a798efad2ff200120a5f4dd7 342 SUPERFAMILY SSF47413 10 69 8.44E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_4729 81ea8745a798efad2ff200120a5f4dd7 342 Pfam PF13377 Periplasmic binding protein-like domain 178 334 3.7E-28 T 14-10-2018 Amir_4729 81ea8745a798efad2ff200120a5f4dd7 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 15 59 3.3E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_4729 81ea8745a798efad2ff200120a5f4dd7 342 SUPERFAMILY SSF53822 72 336 1.25E-46 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_4729 81ea8745a798efad2ff200120a5f4dd7 342 Gene3D G3DSA:1.10.260.40 2 66 6.1E-19 T 14-10-2018 Amir_4729 81ea8745a798efad2ff200120a5f4dd7 342 Gene3D G3DSA:3.40.50.2300 67 311 5.8E-52 T 14-10-2018 Amir_4729 81ea8745a798efad2ff200120a5f4dd7 342 SMART SM00354 10 82 2.1E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_4729 81ea8745a798efad2ff200120a5f4dd7 342 Gene3D G3DSA:3.40.50.2300 168 296 5.8E-52 T 14-10-2018 Amir_4057 677603f4f69035dde853db74cd6187a6 187 Pfam PF07366 SnoaL-like polyketide cyclase 22 141 9.2E-15 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 Amir_4057 677603f4f69035dde853db74cd6187a6 187 Gene3D G3DSA:3.10.450.50 9 144 1.4E-23 T 14-10-2018 Amir_4057 677603f4f69035dde853db74cd6187a6 187 SUPERFAMILY SSF54427 14 142 2.15E-26 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_1232 d1817a7e6d32da72643349bb5b937e06 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 294 7.9E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_1232 d1817a7e6d32da72643349bb5b937e06 319 Gene3D G3DSA:1.10.3720.10 112 309 6.8E-23 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1232 d1817a7e6d32da72643349bb5b937e06 319 SUPERFAMILY SSF161098 112 298 1.44E-26 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0793 b9b1deadaf43ab0159e5bee03e1a3029 395 TIGRFAM TIGR02149 glgA_Coryne: glycogen synthase, Corynebacterium family 10 389 5.8E-177 T 14-10-2018 IPR011875 Alpha-maltose-1-phosphate synthase GO:0009250|GO:0016740 KEGG: 00500+2.4.1.342|MetaCyc: PWY-7900 Amir_0793 b9b1deadaf43ab0159e5bee03e1a3029 395 Gene3D G3DSA:3.40.50.2000 16 387 3.2E-77 T 14-10-2018 Amir_0793 b9b1deadaf43ab0159e5bee03e1a3029 395 Pfam PF00534 Glycosyl transferases group 1 198 369 7.1E-31 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Amir_0793 b9b1deadaf43ab0159e5bee03e1a3029 395 SUPERFAMILY SSF53756 16 392 6.98E-84 T 14-10-2018 Amir_0793 b9b1deadaf43ab0159e5bee03e1a3029 395 Gene3D G3DSA:3.40.50.2000 181 370 3.2E-77 T 14-10-2018 Amir_0793 b9b1deadaf43ab0159e5bee03e1a3029 395 Pfam PF13439 Glycosyltransferase Family 4 23 184 7.5E-29 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amir_1297 f31a75686656116013ddd293da0e8b93 249 SUPERFAMILY SSF53335 11 241 4.26E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_1297 f31a75686656116013ddd293da0e8b93 249 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 1 249 40.863 T 14-10-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 Amir_1297 f31a75686656116013ddd293da0e8b93 249 Pfam PF13489 Methyltransferase domain 12 175 4.1E-12 T 14-10-2018 Amir_1297 f31a75686656116013ddd293da0e8b93 249 Gene3D G3DSA:1.10.150.290 128 229 1.9E-76 T 14-10-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 Amir_1297 f31a75686656116013ddd293da0e8b93 249 Gene3D G3DSA:3.40.50.150 7 246 1.9E-76 T 14-10-2018 Amir_0637 b5328272a0c9d9af66fb8f2620e29043 281 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 9 229 32.47 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Amir_0637 b5328272a0c9d9af66fb8f2620e29043 281 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 10 277 2.3E-64 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Amir_0637 b5328272a0c9d9af66fb8f2620e29043 281 PIRSF PIRSF005917 3 281 8.0E-89 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Amir_0637 b5328272a0c9d9af66fb8f2620e29043 281 Gene3D G3DSA:3.40.1010.10 2 118 3.2E-29 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amir_0637 b5328272a0c9d9af66fb8f2620e29043 281 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 212 8.7E-28 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Amir_0637 b5328272a0c9d9af66fb8f2620e29043 281 SUPERFAMILY SSF53790 8 227 3.27E-71 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amir_0637 b5328272a0c9d9af66fb8f2620e29043 281 Gene3D G3DSA:3.30.950.10 119 235 2.9E-42 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Amir_6582 5e5bc5f98ca1b28fd8badb17d202c6b9 196 Gene3D G3DSA:3.90.1030.10 1 116 6.8E-43 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6582 5e5bc5f98ca1b28fd8badb17d202c6b9 196 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.562 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6582 5e5bc5f98ca1b28fd8badb17d202c6b9 196 TIGRFAM TIGR00059 L17: ribosomal protein bL17 9 116 6.2E-40 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6582 5e5bc5f98ca1b28fd8badb17d202c6b9 196 SUPERFAMILY SSF64263 1 117 5.36E-46 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6582 5e5bc5f98ca1b28fd8badb17d202c6b9 196 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6582 5e5bc5f98ca1b28fd8badb17d202c6b9 196 Pfam PF01196 Ribosomal protein L17 20 116 2.2E-35 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_2358 12cf141ff11a83c4d8880c82d2e0d9c7 292 Gene3D G3DSA:1.20.1330.10 43 238 3.9E-35 T 14-10-2018 Amir_2358 12cf141ff11a83c4d8880c82d2e0d9c7 292 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 5 173 6.5E-38 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 Amir_2358 12cf141ff11a83c4d8880c82d2e0d9c7 292 Pfam PF00700 Bacterial flagellin C-terminal helical region 209 291 2.9E-10 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Amir_2358 12cf141ff11a83c4d8880c82d2e0d9c7 292 Pfam PF00669 Bacterial flagellin N-terminal helical region 10 131 4.5E-14 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Amir_2358 12cf141ff11a83c4d8880c82d2e0d9c7 292 SUPERFAMILY SSF64518 5 292 3.01E-52 T 14-10-2018 Amir_3915 468d9b64baec559c87bbec434c1b1626 360 Pfam PF01032 FecCD transport family 32 349 1.1E-92 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_3915 468d9b64baec559c87bbec434c1b1626 360 SUPERFAMILY SSF81345 16 350 4.58E-83 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_3915 468d9b64baec559c87bbec434c1b1626 360 Gene3D G3DSA:1.10.3470.10 17 355 8.1E-102 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_0442 2901764cd459060941c1260220681796 540 SUPERFAMILY SSF54849 136 199 3.43E-26 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Amir_0442 2901764cd459060941c1260220681796 540 Gene3D G3DSA:3.50.7.10 190 370 8.5E-220 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily Amir_0442 2901764cd459060941c1260220681796 540 Gene3D G3DSA:3.30.260.10 135 408 8.5E-220 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Amir_0442 2901764cd459060941c1260220681796 540 SUPERFAMILY SSF48592 6 519 2.66E-72 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily Amir_0442 2901764cd459060941c1260220681796 540 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amir_0442 2901764cd459060941c1260220681796 540 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 523 2.5E-91 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Amir_0442 2901764cd459060941c1260220681796 540 Gene3D G3DSA:1.10.560.10 7 519 8.5E-220 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily Amir_0442 2901764cd459060941c1260220681796 540 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 525 7.1E-247 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amir_0442 2901764cd459060941c1260220681796 540 Hamap MF_00600 60 kDa chaperonin [groL]. 1 538 41.03 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amir_0442 2901764cd459060941c1260220681796 540 PRINTS PR00298 60kDa chaperonin signature 26 52 2.5E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amir_0442 2901764cd459060941c1260220681796 540 PRINTS PR00298 60kDa chaperonin signature 266 289 2.5E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amir_0442 2901764cd459060941c1260220681796 540 PRINTS PR00298 60kDa chaperonin signature 396 417 2.5E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amir_0442 2901764cd459060941c1260220681796 540 PRINTS PR00298 60kDa chaperonin signature 82 109 2.5E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amir_0442 2901764cd459060941c1260220681796 540 PRINTS PR00298 60kDa chaperonin signature 348 373 2.5E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amir_0442 2901764cd459060941c1260220681796 540 SUPERFAMILY SSF52029 184 374 8.97E-80 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily Amir_4377 050d902c91f1d8fc4916256890d4ac5d 167 SUPERFAMILY SSF47741 86 156 3.01E-24 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Amir_4377 050d902c91f1d8fc4916256890d4ac5d 167 Gene3D G3DSA:1.10.150.120 77 163 1.8E-24 T 14-10-2018 Amir_4377 050d902c91f1d8fc4916256890d4ac5d 167 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 57 1.6E-5 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Amir_4377 050d902c91f1d8fc4916256890d4ac5d 167 Pfam PF01799 [2Fe-2S] binding domain 75 149 2.1E-22 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Amir_4377 050d902c91f1d8fc4916256890d4ac5d 167 SUPERFAMILY SSF54292 4 89 2.16E-21 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amir_4377 050d902c91f1d8fc4916256890d4ac5d 167 Gene3D G3DSA:3.10.20.30 2 76 3.5E-19 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Amir_0607 c0d5bfe3c96e4d02028af22caaa8d1b6 79 Gene3D G3DSA:2.30.170.40 3 79 5.1E-26 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0607 c0d5bfe3c96e4d02028af22caaa8d1b6 79 TIGRFAM TIGR00009 L28: ribosomal protein bL28 3 59 3.1E-22 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_0607 c0d5bfe3c96e4d02028af22caaa8d1b6 79 Pfam PF00830 Ribosomal L28 family 4 62 2.5E-21 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0607 c0d5bfe3c96e4d02028af22caaa8d1b6 79 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 2 68 18.844 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_0607 c0d5bfe3c96e4d02028af22caaa8d1b6 79 SUPERFAMILY SSF143800 3 78 4.71E-25 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_4485 7eeff8624100eeb4fbd73407c9eff0e9 381 Pfam PF04055 Radical SAM superfamily 124 275 2.7E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_4485 7eeff8624100eeb4fbd73407c9eff0e9 381 TIGRFAM TIGR04468 arg_2_3_am_muta: arginine 2,3-aminomutase 19 368 1.9E-195 T 14-10-2018 IPR031015 Arginine 2,3-aminomutase Amir_4485 7eeff8624100eeb4fbd73407c9eff0e9 381 Gene3D G3DSA:3.20.20.70 57 344 1.5E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_4485 7eeff8624100eeb4fbd73407c9eff0e9 381 TIGRFAM TIGR00238 TIGR00238: KamA family protein 15 335 1.1E-97 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Amir_4485 7eeff8624100eeb4fbd73407c9eff0e9 381 SUPERFAMILY SSF102114 113 336 9.42E-30 T 14-10-2018 Amir_4485 7eeff8624100eeb4fbd73407c9eff0e9 381 PIRSF PIRSF004911 2 378 1.8E-149 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Amir_5380 f891e35a4464c7b377dee49c7f0df29f 179 Pfam PF09684 Phage tail protein (Tail_P2_I) 33 160 1.1E-14 T 14-10-2018 IPR006521 Tail protein I Amir_5380 f891e35a4464c7b377dee49c7f0df29f 179 TIGRFAM TIGR02242 tail_TIGR02242: phage tail protein domain 17 120 7.1E-31 T 14-10-2018 IPR011748 Uncharacterised protein family, phage tail-like Amir_0826 7280bbae1b7c1bba36c6d1c265eee77f 75 Pfam PF11305 Protein of unknown function (DUF3107) 1 73 1.4E-27 T 14-10-2018 IPR021456 Protein of unknown function DUF3107 Amir_4094 b79eaf9ff4f12b80117f26071c4701bf 378 SUPERFAMILY SSF55347 141 302 2.45E-34 T 14-10-2018 Amir_4094 b79eaf9ff4f12b80117f26071c4701bf 378 Gene3D G3DSA:3.40.50.720 2 139 6.5E-41 T 14-10-2018 Amir_4094 b79eaf9ff4f12b80117f26071c4701bf 378 Gene3D G3DSA:3.30.360.10 140 378 1.6E-70 T 14-10-2018 Amir_4094 b79eaf9ff4f12b80117f26071c4701bf 378 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 126 2.1E-24 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amir_4094 b79eaf9ff4f12b80117f26071c4701bf 378 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 147 233 4.0E-10 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Amir_4094 b79eaf9ff4f12b80117f26071c4701bf 378 SUPERFAMILY SSF51735 5 167 1.44E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2855 5f5f1ebfba951dfd331191a595d8291e 230 Pfam PF00106 short chain dehydrogenase 12 182 1.6E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2855 5f5f1ebfba951dfd331191a595d8291e 230 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 1.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2855 5f5f1ebfba951dfd331191a595d8291e 230 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 1.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2855 5f5f1ebfba951dfd331191a595d8291e 230 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 1.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2855 5f5f1ebfba951dfd331191a595d8291e 230 Gene3D G3DSA:3.40.50.720 10 222 2.0E-31 T 14-10-2018 Amir_2855 5f5f1ebfba951dfd331191a595d8291e 230 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_2855 5f5f1ebfba951dfd331191a595d8291e 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2855 5f5f1ebfba951dfd331191a595d8291e 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2855 5f5f1ebfba951dfd331191a595d8291e 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2855 5f5f1ebfba951dfd331191a595d8291e 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2855 5f5f1ebfba951dfd331191a595d8291e 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2855 5f5f1ebfba951dfd331191a595d8291e 230 SUPERFAMILY SSF51735 11 209 1.19E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2742 59541b790146fa2c839c4dc6e0897159 292 Pfam PF13732 Domain of unknown function (DUF4162) 211 292 9.5E-13 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 Amir_2742 59541b790146fa2c839c4dc6e0897159 292 Gene3D G3DSA:3.40.50.300 1 231 5.7E-68 T 14-10-2018 Amir_2742 59541b790146fa2c839c4dc6e0897159 292 SMART SM00382 26 205 1.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2742 59541b790146fa2c839c4dc6e0897159 292 SUPERFAMILY SSF52540 2 222 1.28E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2742 59541b790146fa2c839c4dc6e0897159 292 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_2742 59541b790146fa2c839c4dc6e0897159 292 Pfam PF00005 ABC transporter 17 157 1.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3069 25c0b1698d991aff7635216051c31894 269 Pfam PF00005 ABC transporter 29 176 9.0E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3069 25c0b1698d991aff7635216051c31894 269 SUPERFAMILY SSF52540 5 246 4.26E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3069 25c0b1698d991aff7635216051c31894 269 Gene3D G3DSA:3.40.50.300 1 263 9.6E-56 T 14-10-2018 Amir_3069 25c0b1698d991aff7635216051c31894 269 SMART SM00382 37 225 8.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5827 ccab2b09cdf75562125758054b9df4fa 310 Pfam PF06574 FAD synthetase 16 166 1.7E-52 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Amir_5827 ccab2b09cdf75562125758054b9df4fa 310 SUPERFAMILY SSF82114 174 307 4.14E-42 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Amir_5827 ccab2b09cdf75562125758054b9df4fa 310 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 84 6.8E-9 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Amir_5827 ccab2b09cdf75562125758054b9df4fa 310 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 304 1.0E-74 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Amir_5827 ccab2b09cdf75562125758054b9df4fa 310 SMART SM00904 183 308 5.3E-57 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Amir_5827 ccab2b09cdf75562125758054b9df4fa 310 SUPERFAMILY SSF52374 16 175 7.6E-35 T 14-10-2018 Amir_5827 ccab2b09cdf75562125758054b9df4fa 310 Pfam PF01687 Riboflavin kinase 184 306 6.9E-36 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Amir_5827 ccab2b09cdf75562125758054b9df4fa 310 PIRSF PIRSF004491 3 308 4.3E-99 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Amir_5827 ccab2b09cdf75562125758054b9df4fa 310 Gene3D G3DSA:3.40.50.620 1 185 7.6E-62 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_5827 ccab2b09cdf75562125758054b9df4fa 310 Gene3D G3DSA:2.40.30.30 186 310 2.0E-44 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Amir_0948 e83e73b634576aed96e5079b1e38b670 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0948 e83e73b634576aed96e5079b1e38b670 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0948 e83e73b634576aed96e5079b1e38b670 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0948 e83e73b634576aed96e5079b1e38b670 214 Pfam PF00072 Response regulator receiver domain 3 108 4.4E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0948 e83e73b634576aed96e5079b1e38b670 214 Gene3D G3DSA:3.40.50.12740 1 206 2.9E-48 T 14-10-2018 Amir_0948 e83e73b634576aed96e5079b1e38b670 214 SUPERFAMILY SSF52172 2 166 9.72E-22 T 14-10-2018 IPR011006 CheY-like superfamily Amir_0948 e83e73b634576aed96e5079b1e38b670 214 SMART SM00421 147 210 7.9E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0948 e83e73b634576aed96e5079b1e38b670 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 195 4.7E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0948 e83e73b634576aed96e5079b1e38b670 214 SMART SM00448 1 120 1.3E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1484 0903550c1d7afbd9ffac9a80145c42dc 497 Pfam PF00171 Aldehyde dehydrogenase family 5 438 4.4E-49 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_1484 0903550c1d7afbd9ffac9a80145c42dc 497 SUPERFAMILY SSF53720 6 491 1.57E-92 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_1484 0903550c1d7afbd9ffac9a80145c42dc 497 Gene3D G3DSA:3.40.605.10 26 492 5.4E-186 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_1484 0903550c1d7afbd9ffac9a80145c42dc 497 Gene3D G3DSA:3.40.309.10 243 427 5.4E-186 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_0145 c41a1acbe232a2d40c1ed7d9b916be48 249 Pfam PF01925 Sulfite exporter TauE/SafE 10 245 2.3E-40 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Amir_3119 28d89f7379d1053c03405c9f36692293 299 Pfam PF00296 Luciferase-like monooxygenase 12 250 1.9E-48 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_3119 28d89f7379d1053c03405c9f36692293 299 Gene3D G3DSA:3.20.20.30 1 296 6.8E-67 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_3119 28d89f7379d1053c03405c9f36692293 299 TIGRFAM TIGR03619 F420_Rv2161c: probable F420-dependent oxidoreductase, Rv2161c family 22 263 1.1E-59 T 14-10-2018 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted Amir_3119 28d89f7379d1053c03405c9f36692293 299 SUPERFAMILY SSF51679 11 286 6.41E-56 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_0430 f1e56f54c8a6de74972a1db0af7485dc 235 SUPERFAMILY SSF48008 83 212 1.88E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_0430 f1e56f54c8a6de74972a1db0af7485dc 235 Gene3D G3DSA:1.10.10.10 2 79 3.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0430 f1e56f54c8a6de74972a1db0af7485dc 235 Gene3D G3DSA:1.20.120.530 82 215 1.3E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_0430 f1e56f54c8a6de74972a1db0af7485dc 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 8.3E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_0430 f1e56f54c8a6de74972a1db0af7485dc 235 Pfam PF07729 FCD domain 91 208 1.3E-19 T 14-10-2018 IPR011711 GntR, C-terminal Amir_0430 f1e56f54c8a6de74972a1db0af7485dc 235 SMART SM00895 87 209 2.7E-12 T 14-10-2018 IPR011711 GntR, C-terminal Amir_0430 f1e56f54c8a6de74972a1db0af7485dc 235 SMART SM00345 19 77 6.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_0430 f1e56f54c8a6de74972a1db0af7485dc 235 SUPERFAMILY SSF46785 9 81 2.41E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0642 b78acb7fef82b701aecbba404ebe04fe 596 SUPERFAMILY SSF47323 399 580 3.55E-32 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_0642 b78acb7fef82b701aecbba404ebe04fe 596 Gene3D G3DSA:2.20.28.20 140 174 1.5E-140 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amir_0642 b78acb7fef82b701aecbba404ebe04fe 596 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 1.1E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Amir_0642 b78acb7fef82b701aecbba404ebe04fe 596 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 1.1E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Amir_0642 b78acb7fef82b701aecbba404ebe04fe 596 PRINTS PR01041 Methionyl-tRNA synthetase signature 253 264 1.1E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Amir_0642 b78acb7fef82b701aecbba404ebe04fe 596 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 1.1E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Amir_0642 b78acb7fef82b701aecbba404ebe04fe 596 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 1.1E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Amir_0642 b78acb7fef82b701aecbba404ebe04fe 596 PRINTS PR01041 Methionyl-tRNA synthetase signature 398 409 1.1E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Amir_0642 b78acb7fef82b701aecbba404ebe04fe 596 SUPERFAMILY SSF52374 7 398 2.37E-89 T 14-10-2018 Amir_0642 b78acb7fef82b701aecbba404ebe04fe 596 Pfam PF09334 tRNA synthetases class I (M) 6 410 9.6E-142 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_0642 b78acb7fef82b701aecbba404ebe04fe 596 Gene3D G3DSA:3.40.50.620 6 393 1.5E-140 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_0642 b78acb7fef82b701aecbba404ebe04fe 596 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 543 8.2E-144 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Amir_0642 b78acb7fef82b701aecbba404ebe04fe 596 SUPERFAMILY SSF57770 140 174 5.89E-12 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amir_0642 b78acb7fef82b701aecbba404ebe04fe 596 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 591 37.896 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amir_0642 b78acb7fef82b701aecbba404ebe04fe 596 Gene3D G3DSA:1.10.730.10 394 587 4.7E-36 T 14-10-2018 Amir_6538 01490503a3cfd002c4396bc1f6c475a3 190 SUPERFAMILY SSF88946 12 116 4.24E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6538 01490503a3cfd002c4396bc1f6c475a3 190 Pfam PF08281 Sigma-70, region 4 130 180 3.4E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_6538 01490503a3cfd002c4396bc1f6c475a3 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 184 6.7E-28 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_6538 01490503a3cfd002c4396bc1f6c475a3 190 Gene3D G3DSA:1.10.1740.10 8 96 2.4E-14 T 14-10-2018 Amir_6538 01490503a3cfd002c4396bc1f6c475a3 190 SUPERFAMILY SSF88659 112 185 9.91E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_6538 01490503a3cfd002c4396bc1f6c475a3 190 Pfam PF04542 Sigma-70 region 2 27 98 1.2E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6538 01490503a3cfd002c4396bc1f6c475a3 190 Gene3D G3DSA:1.10.10.10 109 188 3.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5704 99b607af1def86865ccee61a7b1f184d 513 Pfam PF00425 chorismate binding enzyme 237 490 1.4E-99 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Amir_5704 99b607af1def86865ccee61a7b1f184d 513 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 39 498 8.1E-171 T 14-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amir_5704 99b607af1def86865ccee61a7b1f184d 513 SUPERFAMILY SSF56322 29 499 1.16E-155 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Amir_5704 99b607af1def86865ccee61a7b1f184d 513 PRINTS PR00095 Anthranilate synthase component I signature 352 365 2.1E-24 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amir_5704 99b607af1def86865ccee61a7b1f184d 513 PRINTS PR00095 Anthranilate synthase component I signature 447 461 2.1E-24 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amir_5704 99b607af1def86865ccee61a7b1f184d 513 PRINTS PR00095 Anthranilate synthase component I signature 432 446 2.1E-24 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amir_5704 99b607af1def86865ccee61a7b1f184d 513 PRINTS PR00095 Anthranilate synthase component I signature 338 351 2.1E-24 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amir_5704 99b607af1def86865ccee61a7b1f184d 513 Pfam PF04715 Anthranilate synthase component I, N terminal region 40 181 9.4E-32 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amir_5704 99b607af1def86865ccee61a7b1f184d 513 Gene3D G3DSA:3.60.120.10 11 508 2.3E-204 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Amir_6277 d2d31ead612531d1a5110397c5a82645 173 Pfam PF02575 YbaB/EbfC DNA-binding family 14 93 6.2E-10 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_6277 d2d31ead612531d1a5110397c5a82645 173 SUPERFAMILY SSF82607 9 90 6.8E-7 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_6277 d2d31ead612531d1a5110397c5a82645 173 Gene3D G3DSA:3.30.1310.10 4 104 4.9E-7 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_1241 c5701aa83fb99649d95e5c966ada729f 340 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 2 330 27.66 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Amir_1241 c5701aa83fb99649d95e5c966ada729f 340 Pfam PF01628 HrcA protein C terminal domain 104 323 3.8E-60 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 Amir_1241 c5701aa83fb99649d95e5c966ada729f 340 Pfam PF08220 DeoR-like helix-turn-helix domain 16 63 1.2E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amir_1241 c5701aa83fb99649d95e5c966ada729f 340 SUPERFAMILY SSF55781 72 338 2.94E-55 T 14-10-2018 Amir_1241 c5701aa83fb99649d95e5c966ada729f 340 Gene3D G3DSA:3.30.390.60 128 229 1.7E-37 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily Amir_1241 c5701aa83fb99649d95e5c966ada729f 340 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 4 335 2.8E-93 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Amir_1241 c5701aa83fb99649d95e5c966ada729f 340 Gene3D G3DSA:1.10.10.10 1 85 2.1E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1241 c5701aa83fb99649d95e5c966ada729f 340 SUPERFAMILY SSF46785 3 84 3.6E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1241 c5701aa83fb99649d95e5c966ada729f 340 Gene3D G3DSA:3.30.450.40 105 331 1.7E-37 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_1241 c5701aa83fb99649d95e5c966ada729f 340 PIRSF PIRSF005485 1 340 2.2E-102 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Amir_4425 cc0a7cf944350e5b81bafbf8995baec3 302 SUPERFAMILY SSF50129 2 145 3.65E-25 T 14-10-2018 IPR011032 GroES-like superfamily Amir_4425 cc0a7cf944350e5b81bafbf8995baec3 302 Gene3D G3DSA:3.40.50.720 117 247 9.3E-51 T 14-10-2018 Amir_4425 cc0a7cf944350e5b81bafbf8995baec3 302 SMART SM00829 12 299 1.1E-7 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_4425 cc0a7cf944350e5b81bafbf8995baec3 302 Pfam PF13602 Zinc-binding dehydrogenase 184 299 8.2E-10 T 14-10-2018 Amir_4425 cc0a7cf944350e5b81bafbf8995baec3 302 Gene3D G3DSA:3.90.180.10 15 298 9.3E-51 T 14-10-2018 Amir_4425 cc0a7cf944350e5b81bafbf8995baec3 302 SUPERFAMILY SSF51735 106 270 1.45E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0929 f802aa8f16b70253cb8b883a89f97a4f 139 Pfam PF02467 Transcription factor WhiB 40 88 3.9E-14 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain Amir_0929 f802aa8f16b70253cb8b883a89f97a4f 139 ProSitePatterns PS00354 HMG-I and HMG-Y DNA-binding domain (A+T-hook). 98 108 - T 14-10-2018 IPR000637 HMG-I/HMG-Y, DNA-binding, conserved site GO:0006355 Amir_0929 f802aa8f16b70253cb8b883a89f97a4f 139 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 102 16.074 T 14-10-2018 IPR003482 Transcription factor WhiB Amir_2986 3649aee2aceaa69696910a227e6e73c0 749 Gene3D G3DSA:2.60.40.1760 1 242 7.7E-75 T 14-10-2018 Amir_2986 3649aee2aceaa69696910a227e6e73c0 749 SUPERFAMILY SSF51445 245 581 3.95E-94 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_2986 3649aee2aceaa69696910a227e6e73c0 749 Gene3D G3DSA:2.60.40.1180 614 661 6.2E-18 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_2986 3649aee2aceaa69696910a227e6e73c0 749 SUPERFAMILY SSF51011 583 661 4.53E-21 T 14-10-2018 Amir_2986 3649aee2aceaa69696910a227e6e73c0 749 Gene3D G3DSA:3.20.20.80 243 613 1.9E-153 T 14-10-2018 Amir_2986 3649aee2aceaa69696910a227e6e73c0 749 SUPERFAMILY SSF117125 663 738 2.09E-13 T 14-10-2018 Amir_2986 3649aee2aceaa69696910a227e6e73c0 749 Gene3D G3DSA:2.60.40.1180 663 747 3.8E-11 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_2986 3649aee2aceaa69696910a227e6e73c0 749 SUPERFAMILY SSF74650 2 244 3.14E-60 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Amir_2986 3649aee2aceaa69696910a227e6e73c0 749 Pfam PF13802 Galactose mutarotase-like 156 215 1.2E-16 T 14-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain Amir_2986 3649aee2aceaa69696910a227e6e73c0 749 Pfam PF01055 Glycosyl hydrolases family 31 238 666 3.4E-121 T 14-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 Amir_2110 5c7fba9ffbee306e386385e0e7cf7c31 251 Gene3D G3DSA:1.10.10.200 1 80 4.8E-31 T 14-10-2018 IPR017856 Integrase-like, N-terminal Amir_2110 5c7fba9ffbee306e386385e0e7cf7c31 251 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 239 2.4E-97 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2110 5c7fba9ffbee306e386385e0e7cf7c31 251 Gene3D G3DSA:3.30.70.980 86 238 1.5E-50 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2110 5c7fba9ffbee306e386385e0e7cf7c31 251 SUPERFAMILY SSF75625 3 248 1.57E-88 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2110 5c7fba9ffbee306e386385e0e7cf7c31 251 Gene3D G3DSA:3.30.70.980 135 205 1.5E-50 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2110 5c7fba9ffbee306e386385e0e7cf7c31 251 Pfam PF01709 Transcriptional regulator 5 239 2.3E-87 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2110 5c7fba9ffbee306e386385e0e7cf7c31 251 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 241 34.545 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3930 e07cf456670abb4bdee12488b5d54e2c 355 SUPERFAMILY SSF51905 5 350 9.71E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3930 e07cf456670abb4bdee12488b5d54e2c 355 Gene3D G3DSA:3.30.9.10 61 313 2.2E-74 T 14-10-2018 Amir_3930 e07cf456670abb4bdee12488b5d54e2c 355 Gene3D G3DSA:3.50.50.60 6 346 2.2E-74 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3930 e07cf456670abb4bdee12488b5d54e2c 355 Pfam PF01266 FAD dependent oxidoreductase 6 345 2.2E-30 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Amir_2387 4c14ba0ae1e2c5afce838604af6542b0 138 SUPERFAMILY SSF102546 1 136 1.83E-26 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Amir_2387 4c14ba0ae1e2c5afce838604af6542b0 138 Gene3D G3DSA:3.40.1650.10 4 138 1.6E-31 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Amir_2387 4c14ba0ae1e2c5afce838604af6542b0 138 Pfam PF05025 RbsD / FucU transport protein family 1 136 1.2E-28 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Amir_2070 23fcf30fecdaac030b61966475f9aa02 432 SUPERFAMILY SSF51905 1 204 2.36E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2070 23fcf30fecdaac030b61966475f9aa02 432 SUPERFAMILY SSF51905 258 422 4.18E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2070 23fcf30fecdaac030b61966475f9aa02 432 Pfam PF00743 Flavin-binding monooxygenase-like 1 422 5.2E-76 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 Amir_2070 23fcf30fecdaac030b61966475f9aa02 432 PIRSF PIRSF000332 1 429 4.5E-87 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 Amir_2070 23fcf30fecdaac030b61966475f9aa02 432 Gene3D G3DSA:3.50.50.60 1 382 2.2E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2070 23fcf30fecdaac030b61966475f9aa02 432 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 71 86 3.4E-28 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 Amir_2070 23fcf30fecdaac030b61966475f9aa02 432 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 21 45 3.4E-28 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 Amir_2070 23fcf30fecdaac030b61966475f9aa02 432 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 96 108 3.4E-28 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 Amir_2070 23fcf30fecdaac030b61966475f9aa02 432 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 185 200 3.4E-28 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 Amir_2070 23fcf30fecdaac030b61966475f9aa02 432 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 298 325 3.4E-28 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 Amir_2070 23fcf30fecdaac030b61966475f9aa02 432 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 344 361 3.4E-28 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 Amir_2070 23fcf30fecdaac030b61966475f9aa02 432 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 361 374 3.4E-28 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 Amir_2070 23fcf30fecdaac030b61966475f9aa02 432 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 129 145 3.4E-28 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 Amir_1398 bbaf1977699740cb8ecd17f032e5791f 486 Pfam PF09594 Glycosyltransferase family 87 183 408 3.3E-5 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 Amir_0820 9cec8e924a8aa5ee19c6f219f7eb45cc 285 Gene3D G3DSA:3.20.20.140 3 252 5.3E-74 T 14-10-2018 Amir_0820 9cec8e924a8aa5ee19c6f219f7eb45cc 285 Pfam PF02811 PHP domain 4 172 1.6E-10 T 14-10-2018 IPR004013 PHP domain GO:0003824 Amir_0820 9cec8e924a8aa5ee19c6f219f7eb45cc 285 SUPERFAMILY SSF89550 2 262 2.62E-41 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Amir_0820 9cec8e924a8aa5ee19c6f219f7eb45cc 285 Gene3D G3DSA:1.10.150.650 100 171 5.3E-74 T 14-10-2018 Amir_0820 9cec8e924a8aa5ee19c6f219f7eb45cc 285 SMART SM00481 3 67 1.0E-12 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Amir_5759 a5b0e521dc61e3e28a1f7783c6a1bfa2 228 Gene3D G3DSA:3.60.140.10 1 228 2.8E-76 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Amir_5759 a5b0e521dc61e3e28a1f7783c6a1bfa2 228 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 2 225 1.3E-72 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Amir_5759 a5b0e521dc61e3e28a1f7783c6a1bfa2 228 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 7 226 5.5E-53 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Amir_5759 a5b0e521dc61e3e28a1f7783c6a1bfa2 228 SUPERFAMILY SSF64438 1 226 1.17E-72 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Amir_2830 80b9f04833139f9136840efcffdf1df0 344 Gene3D G3DSA:1.10.260.40 2 62 6.2E-22 T 14-10-2018 Amir_2830 80b9f04833139f9136840efcffdf1df0 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 1.5E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_2830 80b9f04833139f9136840efcffdf1df0 344 SUPERFAMILY SSF47413 9 66 1.1E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2830 80b9f04833139f9136840efcffdf1df0 344 Gene3D G3DSA:3.40.50.2300 63 313 1.3E-69 T 14-10-2018 Amir_2830 80b9f04833139f9136840efcffdf1df0 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 14-10-2018 Amir_2830 80b9f04833139f9136840efcffdf1df0 344 SMART SM00354 8 78 2.3E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_2830 80b9f04833139f9136840efcffdf1df0 344 SUPERFAMILY SSF53822 67 336 1.32E-65 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_2830 80b9f04833139f9136840efcffdf1df0 344 Pfam PF13377 Periplasmic binding protein-like domain 174 335 3.2E-36 T 14-10-2018 Amir_2830 80b9f04833139f9136840efcffdf1df0 344 Gene3D G3DSA:3.40.50.2300 166 296 1.3E-69 T 14-10-2018 Amir_4288 034f8bd2c3cbab8feeb97106d5cacd80 373 Pfam PF09375 Imelysin 136 362 1.1E-40 T 14-10-2018 IPR018976 Imelysin-like domain Amir_4288 034f8bd2c3cbab8feeb97106d5cacd80 373 Pfam PF13473 Cupredoxin-like domain 16 113 3.9E-9 T 14-10-2018 IPR028096 EfeO-type cupredoxin-like domain Amir_4288 034f8bd2c3cbab8feeb97106d5cacd80 373 Gene3D G3DSA:1.20.1420.20 129 373 1.1E-89 T 14-10-2018 IPR038352 Imelysin-like domain superfamily Amir_1176 680d9029ff6ae326d7e5d70cc5bfd3e2 655 SMART SM00729 264 487 2.4E-28 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amir_1176 680d9029ff6ae326d7e5d70cc5bfd3e2 655 Pfam PF04055 Radical SAM superfamily 268 432 5.7E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_1176 680d9029ff6ae326d7e5d70cc5bfd3e2 655 SUPERFAMILY SSF102114 231 635 5.76E-50 T 14-10-2018 Amir_1176 680d9029ff6ae326d7e5d70cc5bfd3e2 655 TIGRFAM TIGR03960 rSAM_fuse_unch: radical SAM family uncharacterized protein 13 620 4.5E-210 T 14-10-2018 IPR023862 Conserved hypothetical protein CHP03960, radical SAM Amir_1176 680d9029ff6ae326d7e5d70cc5bfd3e2 655 Gene3D G3DSA:3.80.30.20 263 495 8.9E-19 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amir_6127 1c4bd6835b5ba3d6fca3b85199e7f8fc 255 Gene3D G3DSA:3.90.226.10 3 196 8.7E-52 T 14-10-2018 Amir_6127 1c4bd6835b5ba3d6fca3b85199e7f8fc 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 254 5.8E-49 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Amir_6127 1c4bd6835b5ba3d6fca3b85199e7f8fc 255 Gene3D G3DSA:1.10.12.10 199 255 1.8E-14 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Amir_6127 1c4bd6835b5ba3d6fca3b85199e7f8fc 255 SUPERFAMILY SSF52096 2 253 1.19E-66 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_6007 dd75b88a5e1febae2c0673a3c25425ce 233 Pfam PF09339 IclR helix-turn-helix domain 10 56 5.7E-12 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_6007 dd75b88a5e1febae2c0673a3c25425ce 233 SUPERFAMILY SSF46785 7 73 4.36E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6007 dd75b88a5e1febae2c0673a3c25425ce 233 SMART SM00346 7 92 4.3E-23 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_6007 dd75b88a5e1febae2c0673a3c25425ce 233 Gene3D G3DSA:3.30.450.40 72 232 2.1E-39 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_6007 dd75b88a5e1febae2c0673a3c25425ce 233 Pfam PF01614 Bacterial transcriptional regulator 124 230 2.6E-16 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Amir_6007 dd75b88a5e1febae2c0673a3c25425ce 233 SUPERFAMILY SSF55781 62 233 9.81E-38 T 14-10-2018 Amir_6007 dd75b88a5e1febae2c0673a3c25425ce 233 Gene3D G3DSA:1.10.10.10 2 71 8.7E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2746 8813c892c41631a58d32375f4963c1d0 169 Gene3D G3DSA:3.30.450.40 8 168 1.8E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_2746 8813c892c41631a58d32375f4963c1d0 169 SUPERFAMILY SSF55781 30 161 2.58E-16 T 14-10-2018 Amir_2746 8813c892c41631a58d32375f4963c1d0 169 Pfam PF13185 GAF domain 30 159 5.7E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2731 576bf8ad9fce6fc72807226bc7090821 255 Pfam PF00005 ABC transporter 19 167 5.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2731 576bf8ad9fce6fc72807226bc7090821 255 Gene3D G3DSA:3.40.50.300 1 252 3.1E-65 T 14-10-2018 Amir_2731 576bf8ad9fce6fc72807226bc7090821 255 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_2731 576bf8ad9fce6fc72807226bc7090821 255 SMART SM00382 27 211 1.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2731 576bf8ad9fce6fc72807226bc7090821 255 SUPERFAMILY SSF52540 3 225 2.15E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6656 c4471ee8ab70290afa9644005c7f228a 173 Pfam PF00037 4Fe-4S binding domain 62 82 4.9E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amir_6656 c4471ee8ab70290afa9644005c7f228a 173 SUPERFAMILY SSF54862 7 88 1.91E-15 T 14-10-2018 Amir_6656 c4471ee8ab70290afa9644005c7f228a 173 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 67 78 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amir_6656 c4471ee8ab70290afa9644005c7f228a 173 Gene3D G3DSA:3.30.70.3270 1 117 2.8E-25 T 14-10-2018 Amir_4179 7bb77d28e168911d1411cca85bbea17d 166 Gene3D G3DSA:1.10.10.10 10 155 1.1E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4179 7bb77d28e168911d1411cca85bbea17d 166 SUPERFAMILY SSF46785 9 152 7.55E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4179 7bb77d28e168911d1411cca85bbea17d 166 SMART SM00347 35 138 8.7E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4179 7bb77d28e168911d1411cca85bbea17d 166 Pfam PF01047 MarR family 42 100 3.5E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4179 7bb77d28e168911d1411cca85bbea17d 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 1.9E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4179 7bb77d28e168911d1411cca85bbea17d 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 1.9E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4179 7bb77d28e168911d1411cca85bbea17d 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 61 77 1.9E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4179 7bb77d28e168911d1411cca85bbea17d 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 128 148 1.9E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_5879 3747451791347be65b701ee6a928553c 445 Gene3D G3DSA:1.20.1250.20 54 236 4.2E-9 T 14-10-2018 Amir_5879 3747451791347be65b701ee6a928553c 445 Gene3D G3DSA:1.20.1250.20 256 443 8.4E-18 T 14-10-2018 Amir_5879 3747451791347be65b701ee6a928553c 445 Pfam PF07690 Major Facilitator Superfamily 64 401 6.2E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_5879 3747451791347be65b701ee6a928553c 445 SUPERFAMILY SSF103473 41 441 7.72E-38 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_1370 4599c34ba82d9a65bf2ecddc6fb65f15 349 Gene3D G3DSA:3.40.1030.10 76 347 1.9E-92 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_1370 4599c34ba82d9a65bf2ecddc6fb65f15 349 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 8 340 33.994 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Amir_1370 4599c34ba82d9a65bf2ecddc6fb65f15 349 Gene3D G3DSA:1.20.970.10 4 69 6.2E-28 T 14-10-2018 Amir_1370 4599c34ba82d9a65bf2ecddc6fb65f15 349 Pfam PF02885 Glycosyl transferase family, helical bundle domain 9 69 8.1E-19 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_1370 4599c34ba82d9a65bf2ecddc6fb65f15 349 SUPERFAMILY SSF47648 6 72 1.96E-17 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_1370 4599c34ba82d9a65bf2ecddc6fb65f15 349 Pfam PF00591 Glycosyl transferase family, a/b domain 77 330 3.2E-78 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_1370 4599c34ba82d9a65bf2ecddc6fb65f15 349 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 11 339 1.6E-109 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Amir_1370 4599c34ba82d9a65bf2ecddc6fb65f15 349 SUPERFAMILY SSF52418 78 343 2.75E-79 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 Pfam PF00425 chorismate binding enzyme 403 657 7.7E-87 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 Pfam PF00117 Glutamine amidotransferase class-I 4 185 1.7E-36 T 14-10-2018 IPR017926 Glutamine amidotransferase Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 PRINTS PR00097 Anthranilate synthase component II signature 121 133 1.1E-25 T 14-10-2018 Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 PRINTS PR00097 Anthranilate synthase component II signature 77 88 1.1E-25 T 14-10-2018 Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 PRINTS PR00097 Anthranilate synthase component II signature 49 58 1.1E-25 T 14-10-2018 Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 PRINTS PR00097 Anthranilate synthase component II signature 3 17 1.1E-25 T 14-10-2018 Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 PRINTS PR00097 Anthranilate synthase component II signature 165 178 1.1E-25 T 14-10-2018 Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 SUPERFAMILY SSF56322 213 666 9.42E-126 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 185 1.9E-38 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 1.4E-12 T 14-10-2018 Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 PRINTS PR00096 Glutamine amidotransferase superfamily signature 49 58 1.4E-12 T 14-10-2018 Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 1.4E-12 T 14-10-2018 Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 Pfam PF04715 Anthranilate synthase component I, N terminal region 222 361 2.3E-19 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 Gene3D G3DSA:3.40.50.880 1 187 1.4E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 316 659 9.8E-111 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 SUPERFAMILY SSF52317 1 188 6.33E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 Gene3D G3DSA:3.60.120.10 210 669 6.6E-146 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 46 60 1.5E-6 T 14-10-2018 Amir_5650 c1d8cb7171b3aeb59ccc455cb81eefb3 672 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 1.5E-6 T 14-10-2018 Amir_3178 ca64c93bad2038f43be4cc2234e0fe15 1074 Gene3D G3DSA:1.10.10.10 1007 1071 3.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3178 ca64c93bad2038f43be4cc2234e0fe15 1074 Pfam PF00196 Bacterial regulatory proteins, luxR family 1012 1062 5.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3178 ca64c93bad2038f43be4cc2234e0fe15 1074 SMART SM00421 1009 1066 7.6E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3178 ca64c93bad2038f43be4cc2234e0fe15 1074 Pfam PF13191 AAA ATPase domain 2 117 3.8E-8 T 14-10-2018 Amir_3178 ca64c93bad2038f43be4cc2234e0fe15 1074 SUPERFAMILY SSF52540 8 121 9.82E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3178 ca64c93bad2038f43be4cc2234e0fe15 1074 Gene3D G3DSA:1.25.40.10 830 1006 1.6E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3178 ca64c93bad2038f43be4cc2234e0fe15 1074 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 1026 1042 7.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3178 ca64c93bad2038f43be4cc2234e0fe15 1074 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 1042 1054 7.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3178 ca64c93bad2038f43be4cc2234e0fe15 1074 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 1012 1026 7.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3178 ca64c93bad2038f43be4cc2234e0fe15 1074 SUPERFAMILY SSF46894 1003 1063 3.4E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_3178 ca64c93bad2038f43be4cc2234e0fe15 1074 ProSitePatterns PS00622 LuxR-type HTH domain signature. 1026 1053 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0184 29c8a91c7967f506aac13f11ba9eb8e5 259 SUPERFAMILY SSF56752 16 242 4.84E-41 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Amir_0184 29c8a91c7967f506aac13f11ba9eb8e5 259 Gene3D G3DSA:3.30.470.10 14 107 2.1E-6 T 14-10-2018 Amir_0184 29c8a91c7967f506aac13f11ba9eb8e5 259 Pfam PF01063 Amino-transferase class IV 22 231 5.6E-35 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Amir_0184 29c8a91c7967f506aac13f11ba9eb8e5 259 Gene3D G3DSA:3.20.10.10 112 254 2.0E-26 T 14-10-2018 Amir_4202 32547aca8bffec0c1b74b4be2c99e434 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 1.9E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4202 32547aca8bffec0c1b74b4be2c99e434 204 SUPERFAMILY SSF46689 11 74 4.99E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4202 32547aca8bffec0c1b74b4be2c99e434 204 Gene3D G3DSA:1.10.357.10 9 186 7.0E-24 T 14-10-2018 Amir_4202 32547aca8bffec0c1b74b4be2c99e434 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 3.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4202 32547aca8bffec0c1b74b4be2c99e434 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 3.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4951 dda39222f9f333295c7e8187e68bc263 281 Pfam PF03631 Virulence factor BrkB 28 268 1.6E-12 T 14-10-2018 IPR017039 Virulence factor BrkB Amir_1166 a44ad2a33e19f948411e5ae85febe989 452 SUPERFAMILY SSF53244 308 449 3.11E-27 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amir_1166 a44ad2a33e19f948411e5ae85febe989 452 PIRSF PIRSF001563 13 451 1.8E-115 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Amir_1166 a44ad2a33e19f948411e5ae85febe989 452 Pfam PF08245 Mur ligase middle domain 53 280 1.9E-13 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Amir_1166 a44ad2a33e19f948411e5ae85febe989 452 SUPERFAMILY SSF53623 17 304 3.15E-90 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amir_1166 a44ad2a33e19f948411e5ae85febe989 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 385 1.5E-11 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Amir_1166 a44ad2a33e19f948411e5ae85febe989 452 Gene3D G3DSA:3.90.190.20 308 452 4.4E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amir_1166 a44ad2a33e19f948411e5ae85febe989 452 Gene3D G3DSA:3.40.1190.10 8 307 2.3E-97 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amir_1166 a44ad2a33e19f948411e5ae85febe989 452 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 445 4.8E-102 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Amir_2878 dc0cc5d468804daf65e95ad4f5940160 378 Gene3D G3DSA:3.50.50.60 1 362 6.1E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2878 dc0cc5d468804daf65e95ad4f5940160 378 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.4E-15 T 14-10-2018 Amir_2878 dc0cc5d468804daf65e95ad4f5940160 378 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 1.4E-15 T 14-10-2018 Amir_2878 dc0cc5d468804daf65e95ad4f5940160 378 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 1.4E-15 T 14-10-2018 Amir_2878 dc0cc5d468804daf65e95ad4f5940160 378 Pfam PF01494 FAD binding domain 4 324 3.6E-16 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_2878 dc0cc5d468804daf65e95ad4f5940160 378 SUPERFAMILY SSF51905 3 364 5.91E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2579 f88e64a806bb77731e01ba4af21add33 206 Gene3D G3DSA:1.10.1740.10 17 110 1.5E-14 T 14-10-2018 Amir_2579 f88e64a806bb77731e01ba4af21add33 206 Gene3D G3DSA:1.10.10.10 124 204 6.8E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2579 f88e64a806bb77731e01ba4af21add33 206 Pfam PF08281 Sigma-70, region 4 144 196 1.9E-8 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_2579 f88e64a806bb77731e01ba4af21add33 206 SUPERFAMILY SSF88659 139 200 4.36E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_2579 f88e64a806bb77731e01ba4af21add33 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 40 198 2.2E-20 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_2579 f88e64a806bb77731e01ba4af21add33 206 Pfam PF04542 Sigma-70 region 2 44 112 1.1E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_2579 f88e64a806bb77731e01ba4af21add33 206 SUPERFAMILY SSF88946 18 121 6.67E-17 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_0975 62cc5059422b5417217c05bbc092d582 338 Gene3D G3DSA:3.40.50.2300 65 309 1.7E-77 T 14-10-2018 Amir_0975 62cc5059422b5417217c05bbc092d582 338 SUPERFAMILY SSF53822 64 334 2.54E-68 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_0975 62cc5059422b5417217c05bbc092d582 338 SMART SM00354 4 74 8.1E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_0975 62cc5059422b5417217c05bbc092d582 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 14-10-2018 Amir_0975 62cc5059422b5417217c05bbc092d582 338 Pfam PF13377 Periplasmic binding protein-like domain 171 334 2.1E-37 T 14-10-2018 Amir_0975 62cc5059422b5417217c05bbc092d582 338 SUPERFAMILY SSF47413 5 60 3.28E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_0975 62cc5059422b5417217c05bbc092d582 338 Gene3D G3DSA:1.10.260.40 2 61 4.8E-20 T 14-10-2018 Amir_0975 62cc5059422b5417217c05bbc092d582 338 Gene3D G3DSA:3.40.50.2300 163 293 1.7E-77 T 14-10-2018 Amir_0975 62cc5059422b5417217c05bbc092d582 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 5.8E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1240 324050a9b159a99d8fe81698f7b23708 404 Pfam PF04055 Radical SAM superfamily 34 208 2.5E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_1240 324050a9b159a99d8fe81698f7b23708 404 SUPERFAMILY SSF102114 21 403 6.93E-103 T 14-10-2018 Amir_1240 324050a9b159a99d8fe81698f7b23708 404 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 32 363 2.2E-71 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 Amir_1240 324050a9b159a99d8fe81698f7b23708 404 Gene3D G3DSA:3.80.30.20 14 331 5.3E-87 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amir_1240 324050a9b159a99d8fe81698f7b23708 404 SMART SM00729 29 254 4.5E-53 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amir_1325 83fe8bb4b8e747dce44ce7549df00a2e 79 Pfam PF00550 Phosphopantetheine attachment site 10 75 4.9E-17 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_1325 83fe8bb4b8e747dce44ce7549df00a2e 79 SUPERFAMILY SSF47336 3 78 1.44E-22 T 14-10-2018 IPR036736 ACP-like superfamily Amir_1325 83fe8bb4b8e747dce44ce7549df00a2e 79 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 17.223 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Amir_1325 83fe8bb4b8e747dce44ce7549df00a2e 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 5 78 7.5E-21 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Amir_1325 83fe8bb4b8e747dce44ce7549df00a2e 79 Gene3D G3DSA:1.10.1200.10 1 79 3.3E-26 T 14-10-2018 IPR036736 ACP-like superfamily Amir_1325 83fe8bb4b8e747dce44ce7549df00a2e 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 36 75 5.0E-12 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Amir_4889 f4361dde21b33d94d9dd1e54128efe73 258 SUPERFAMILY SSF161098 58 240 5.23E-27 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4889 f4361dde21b33d94d9dd1e54128efe73 258 Gene3D G3DSA:1.10.3720.10 57 254 1.4E-21 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4889 f4361dde21b33d94d9dd1e54128efe73 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 254 6.3E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_4602 49b78e851b864d122fa309f45c2f2a41 382 SUPERFAMILY SSF51905 2 363 9.26E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4602 49b78e851b864d122fa309f45c2f2a41 382 Gene3D G3DSA:3.50.50.60 4 337 3.9E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4602 49b78e851b864d122fa309f45c2f2a41 382 Gene3D G3DSA:3.30.9.30 35 267 3.9E-83 T 14-10-2018 Amir_4602 49b78e851b864d122fa309f45c2f2a41 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 306 1.3E-15 T 14-10-2018 Amir_4602 49b78e851b864d122fa309f45c2f2a41 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.3E-15 T 14-10-2018 Amir_4602 49b78e851b864d122fa309f45c2f2a41 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 275 290 1.3E-15 T 14-10-2018 Amir_4602 49b78e851b864d122fa309f45c2f2a41 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 145 160 1.3E-15 T 14-10-2018 Amir_4602 49b78e851b864d122fa309f45c2f2a41 382 Pfam PF01494 FAD binding domain 2 336 9.8E-20 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_6323 d07c2c40194b4a69ad6fdabc2f9c815b 305 Pfam PF01545 Cation efflux family 10 212 3.4E-32 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Amir_6323 d07c2c40194b4a69ad6fdabc2f9c815b 305 SUPERFAMILY SSF161111 6 219 1.1E-35 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Amir_6323 d07c2c40194b4a69ad6fdabc2f9c815b 305 Gene3D G3DSA:1.20.1510.10 7 217 3.6E-29 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Amir_6323 d07c2c40194b4a69ad6fdabc2f9c815b 305 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 8 288 2.6E-39 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Amir_6576 0e835bcbb3d2a3149f8ec0bc20ad6ef5 540 TIGRFAM TIGR03919 T7SS_EccB: type VII secretion protein EccB 136 510 1.1E-65 T 14-10-2018 IPR007795 Type VII secretion system EccB Amir_6576 0e835bcbb3d2a3149f8ec0bc20ad6ef5 540 Gene3D G3DSA:2.40.50.900 71 179 4.3E-11 T 14-10-2018 Amir_6576 0e835bcbb3d2a3149f8ec0bc20ad6ef5 540 Gene3D G3DSA:2.40.50.910 288 362 4.0E-9 T 14-10-2018 Amir_6576 0e835bcbb3d2a3149f8ec0bc20ad6ef5 540 Pfam PF05108 Type VII secretion system ESX-1, transport TM domain B 4 523 4.6E-119 T 14-10-2018 IPR007795 Type VII secretion system EccB Amir_5253 3177ffb1113264178ff00bfc1972e365 368 SUPERFAMILY SSF56796 11 353 5.76E-100 T 14-10-2018 Amir_5253 3177ffb1113264178ff00bfc1972e365 368 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 4 358 61.489 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Amir_5253 3177ffb1113264178ff00bfc1972e365 368 PIRSF PIRSF001455 4 353 3.1E-98 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Amir_5253 3177ffb1113264178ff00bfc1972e365 368 Gene3D G3DSA:1.20.1090.10 172 359 8.6E-68 T 14-10-2018 Amir_5253 3177ffb1113264178ff00bfc1972e365 368 Gene3D G3DSA:3.40.50.1970 1 171 2.2E-59 T 14-10-2018 Amir_5253 3177ffb1113264178ff00bfc1972e365 368 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 15 338 1.1E-105 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Amir_5253 3177ffb1113264178ff00bfc1972e365 368 Pfam PF01761 3-dehydroquinate synthase 66 323 6.4E-93 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 SUPERFAMILY SSF50370 435 565 2.41E-35 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 Gene3D G3DSA:3.20.20.70 77 346 2.2E-125 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 SUPERFAMILY SSF51011 345 429 2.88E-15 T 14-10-2018 Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 ProSitePatterns PS00512 Alpha-galactosidase signature. 116 132 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 SMART SM00458 437 567 4.0E-24 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 PRINTS PR00740 Glycosyl hydrolase family 27 signature 278 297 8.3E-62 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 PRINTS PR00740 Glycosyl hydrolase family 27 signature 186 203 8.3E-62 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 PRINTS PR00740 Glycosyl hydrolase family 27 signature 152 173 8.3E-62 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 PRINTS PR00740 Glycosyl hydrolase family 27 signature 299 320 8.3E-62 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 PRINTS PR00740 Glycosyl hydrolase family 27 signature 111 126 8.3E-62 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 PRINTS PR00740 Glycosyl hydrolase family 27 signature 75 94 8.3E-62 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 PRINTS PR00740 Glycosyl hydrolase family 27 signature 213 231 8.3E-62 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 Gene3D G3DSA:2.80.10.50 435 566 8.8E-36 T 14-10-2018 Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 SUPERFAMILY SSF51445 71 344 8.78E-103 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 Pfam PF16499 Alpha galactosidase A 81 343 2.4E-85 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 Gene3D G3DSA:2.60.40.1180 347 431 9.5E-19 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_1665 12cc6c9fb03a42dd1b01f61313c45226 567 Pfam PF00652 Ricin-type beta-trefoil lectin domain 440 564 1.2E-24 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_5354 f7e1e6606abfa80f24f8a279dabd9d61 157 SUPERFAMILY SSF103256 1 136 7.98E-46 T 14-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 Amir_5354 f7e1e6606abfa80f24f8a279dabd9d61 157 Gene3D G3DSA:3.10.690.10 1 140 5.2E-45 T 14-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 Amir_5354 f7e1e6606abfa80f24f8a279dabd9d61 157 Pfam PF02577 Bifunctional nuclease 6 127 7.6E-44 T 14-10-2018 IPR003729 Bifunctional nuclease domain GO:0004518 Amir_1280 7e9fe863d29c1fc76a2e8efa1835397f 233 SMART SM00345 8 67 3.1E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1280 7e9fe863d29c1fc76a2e8efa1835397f 233 SMART SM00866 79 224 5.6E-13 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Amir_1280 7e9fe863d29c1fc76a2e8efa1835397f 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 8.6E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1280 7e9fe863d29c1fc76a2e8efa1835397f 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 8.6E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1280 7e9fe863d29c1fc76a2e8efa1835397f 233 SUPERFAMILY SSF46785 5 71 3.9E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1280 7e9fe863d29c1fc76a2e8efa1835397f 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 8.1E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1280 7e9fe863d29c1fc76a2e8efa1835397f 233 Gene3D G3DSA:1.10.10.10 3 69 6.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1280 7e9fe863d29c1fc76a2e8efa1835397f 233 Pfam PF07702 UTRA domain 94 223 6.0E-20 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Amir_1280 7e9fe863d29c1fc76a2e8efa1835397f 233 SUPERFAMILY SSF64288 55 229 8.32E-28 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Amir_1280 7e9fe863d29c1fc76a2e8efa1835397f 233 Gene3D G3DSA:3.40.1410.10 70 227 6.5E-34 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Amir_2063 bc3e89d41babf97912da373ee69a5987 561 Gene3D G3DSA:1.10.10.2840 433 561 1.0E-27 T 14-10-2018 Amir_2063 bc3e89d41babf97912da373ee69a5987 561 Pfam PF13556 PucR C-terminal helix-turn-helix domain 502 560 1.7E-23 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Amir_2063 bc3e89d41babf97912da373ee69a5987 561 Pfam PF07905 Purine catabolism regulatory protein-like family 5 118 3.1E-22 T 14-10-2018 IPR012914 Purine catabolism PurC-like domain Amir_5036 aee5a75d5e39123bf4eca045717b8eb4 251 Pfam PF12697 Alpha/beta hydrolase family 23 234 1.5E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_5036 aee5a75d5e39123bf4eca045717b8eb4 251 Gene3D G3DSA:3.40.50.1820 2 250 2.3E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5036 aee5a75d5e39123bf4eca045717b8eb4 251 SUPERFAMILY SSF53474 5 240 9.53E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2506 d248daccca14571aff850da02c7ff35e 483 Gene3D G3DSA:3.40.309.10 253 440 1.7E-139 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_2506 d248daccca14571aff850da02c7ff35e 483 Gene3D G3DSA:3.40.605.10 25 458 1.7E-139 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_2506 d248daccca14571aff850da02c7ff35e 483 Pfam PF00171 Aldehyde dehydrogenase family 23 472 5.4E-137 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_2506 d248daccca14571aff850da02c7ff35e 483 SUPERFAMILY SSF53720 12 476 2.49E-136 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_2506 d248daccca14571aff850da02c7ff35e 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Amir_2506 d248daccca14571aff850da02c7ff35e 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Amir_3895 5290e63b28eb9f585b00f9d7652b3200 225 Gene3D G3DSA:3.90.550.10 3 209 3.0E-17 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_3895 5290e63b28eb9f585b00f9d7652b3200 225 SUPERFAMILY SSF53448 5 195 1.13E-16 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_2336 07c6b417c8b8a14333ce07e79b9fd5eb 295 Gene3D G3DSA:3.30.1330.60 106 287 1.1E-40 T 14-10-2018 IPR036737 OmpA-like domain superfamily Amir_2336 07c6b417c8b8a14333ce07e79b9fd5eb 295 PRINTS PR01021 OMPA domain signature 173 195 9.8E-5 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Amir_2336 07c6b417c8b8a14333ce07e79b9fd5eb 295 PRINTS PR01021 OMPA domain signature 221 237 9.8E-5 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Amir_2336 07c6b417c8b8a14333ce07e79b9fd5eb 295 SUPERFAMILY SSF103088 164 277 7.06E-26 T 14-10-2018 IPR036737 OmpA-like domain superfamily Amir_2336 07c6b417c8b8a14333ce07e79b9fd5eb 295 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 8 61 8.7E-24 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain Amir_2336 07c6b417c8b8a14333ce07e79b9fd5eb 295 Pfam PF00691 OmpA family 173 270 1.6E-16 T 14-10-2018 IPR006665 OmpA-like domain Amir_0605 980f52c72876d676fd04bcb6d8df9011 98 Gene3D G3DSA:4.10.830.10 37 98 2.9E-22 T 14-10-2018 Amir_0605 980f52c72876d676fd04bcb6d8df9011 98 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 98 25.761 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid Amir_0605 980f52c72876d676fd04bcb6d8df9011 98 SUPERFAMILY SSF57716 2 98 3.49E-32 T 14-10-2018 Amir_0605 980f52c72876d676fd04bcb6d8df9011 98 Pfam PF00253 Ribosomal protein S14p/S29e 45 97 3.2E-23 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_3049 c7625efd01137e1478318db536cd9557 414 SUPERFAMILY SSF51338 5 52 2.94E-5 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_3049 c7625efd01137e1478318db536cd9557 414 Gene3D G3DSA:3.20.20.140 40 396 3.8E-90 T 14-10-2018 Amir_3049 c7625efd01137e1478318db536cd9557 414 SUPERFAMILY SSF51338 301 412 1.75E-22 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_3049 c7625efd01137e1478318db536cd9557 414 SUPERFAMILY SSF51556 38 340 5.33E-57 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_3049 c7625efd01137e1478318db536cd9557 414 Gene3D G3DSA:2.30.40.10 24 394 3.8E-90 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_3049 c7625efd01137e1478318db536cd9557 414 Pfam PF01979 Amidohydrolase family 35 388 1.5E-34 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_4272 5633226d7d6d4203d83047c426b97d64 249 SUPERFAMILY SSF53474 15 248 8.84E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4272 5633226d7d6d4203d83047c426b97d64 249 Pfam PF12697 Alpha/beta hydrolase family 20 244 2.1E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4272 5633226d7d6d4203d83047c426b97d64 249 Gene3D G3DSA:3.40.50.1820 3 249 1.0E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4272 5633226d7d6d4203d83047c426b97d64 249 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 2.1E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4272 5633226d7d6d4203d83047c426b97d64 249 PRINTS PR00111 Alpha/beta hydrolase fold signature 196 210 2.1E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4272 5633226d7d6d4203d83047c426b97d64 249 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 101 2.1E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_1988 e63db2f6a33e43891e82b8b037fd88cc 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 1.5E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1988 e63db2f6a33e43891e82b8b037fd88cc 181 SUPERFAMILY SSF48498 81 181 1.44E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_1988 e63db2f6a33e43891e82b8b037fd88cc 181 SUPERFAMILY SSF46689 6 77 3.37E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_1988 e63db2f6a33e43891e82b8b037fd88cc 181 Gene3D G3DSA:1.10.357.10 2 181 2.2E-46 T 14-10-2018 Amir_1353 45b9f68bd679023c555049107cb90fd7 202 Gene3D G3DSA:3.40.50.720 2 202 4.1E-40 T 14-10-2018 Amir_1353 45b9f68bd679023c555049107cb90fd7 202 SUPERFAMILY SSF51735 2 200 5.01E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1353 45b9f68bd679023c555049107cb90fd7 202 Pfam PF13460 NAD(P)H-binding 7 191 1.7E-35 T 14-10-2018 IPR016040 NAD(P)-binding domain Amir_3177 cdbb96343c419730fed703981000a85c 348 Gene3D G3DSA:3.40.50.150 105 341 2.0E-53 T 14-10-2018 Amir_3177 cdbb96343c419730fed703981000a85c 348 Pfam PF00891 O-methyltransferase 115 321 1.1E-36 T 14-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 Amir_3177 cdbb96343c419730fed703981000a85c 348 SUPERFAMILY SSF53335 109 337 8.04E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3177 cdbb96343c419730fed703981000a85c 348 Gene3D G3DSA:1.10.10.10 4 104 9.4E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3177 cdbb96343c419730fed703981000a85c 348 PIRSF PIRSF005739 4 335 5.8E-35 T 14-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 Amir_3177 cdbb96343c419730fed703981000a85c 348 SUPERFAMILY SSF46785 14 98 2.47E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5014 9b2244d8d601a70c35064ea691cb60fd 366 SMART SM00829 12 365 0.0034 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_5014 9b2244d8d601a70c35064ea691cb60fd 366 Gene3D G3DSA:3.40.50.720 174 309 8.5E-119 T 14-10-2018 Amir_5014 9b2244d8d601a70c35064ea691cb60fd 366 Gene3D G3DSA:3.90.180.10 8 361 8.5E-119 T 14-10-2018 Amir_5014 9b2244d8d601a70c35064ea691cb60fd 366 SUPERFAMILY SSF50129 2 193 6.54E-58 T 14-10-2018 IPR011032 GroES-like superfamily Amir_5014 9b2244d8d601a70c35064ea691cb60fd 366 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amir_5014 9b2244d8d601a70c35064ea691cb60fd 366 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 152 3.0E-24 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_5014 9b2244d8d601a70c35064ea691cb60fd 366 Pfam PF00107 Zinc-binding dehydrogenase 197 313 7.4E-27 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_5014 9b2244d8d601a70c35064ea691cb60fd 366 SUPERFAMILY SSF51735 159 330 1.47E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1012 037df6136c0b43eb21cbc893ae9e0aff 256 Gene3D G3DSA:3.60.15.10 1 256 2.2E-67 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_1012 037df6136c0b43eb21cbc893ae9e0aff 256 Pfam PF12706 Beta-lactamase superfamily domain 30 223 8.5E-22 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_1012 037df6136c0b43eb21cbc893ae9e0aff 256 SMART SM00849 18 223 4.1E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_1012 037df6136c0b43eb21cbc893ae9e0aff 256 SUPERFAMILY SSF56281 1 255 1.7E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_1018 db59b79beccbcf52e41adc8297cec6ac 142 Gene3D G3DSA:3.30.300.20 4 131 5.4E-15 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Amir_1018 db59b79beccbcf52e41adc8297cec6ac 142 SUPERFAMILY SSF82784 7 127 1.44E-15 T 14-10-2018 IPR036102 OsmC/Ohr superfamily Amir_1018 db59b79beccbcf52e41adc8297cec6ac 142 Pfam PF02566 OsmC-like protein 33 127 1.5E-10 T 14-10-2018 IPR003718 OsmC/Ohr family Amir_6963 c2ad27d6f5518f6b52074e4637f174bf 612 Gene3D G3DSA:2.40.110.10 160 296 3.8E-26 T 14-10-2018 Amir_6963 c2ad27d6f5518f6b52074e4637f174bf 612 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 276 4.0E-17 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amir_6963 c2ad27d6f5518f6b52074e4637f174bf 612 SUPERFAMILY SSF47203 296 476 4.03E-30 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_6963 c2ad27d6f5518f6b52074e4637f174bf 612 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 4.6E-8 T 14-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria Amir_6963 c2ad27d6f5518f6b52074e4637f174bf 612 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 476 608 7.5E-33 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Amir_6963 c2ad27d6f5518f6b52074e4637f174bf 612 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 292 455 6.1E-14 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_6963 c2ad27d6f5518f6b52074e4637f174bf 612 Gene3D G3DSA:1.10.540.10 36 153 2.2E-6 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_6963 c2ad27d6f5518f6b52074e4637f174bf 612 Gene3D G3DSA:1.20.140.10 297 464 2.4E-30 T 14-10-2018 Amir_6963 c2ad27d6f5518f6b52074e4637f174bf 612 SUPERFAMILY SSF56645 56 298 8.64E-44 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_2332 b92e5d99b1c2fdf9f22993727334ac0f 318 Pfam PF04347 Flagellar biosynthesis protein, FliO 31 91 3.8E-10 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Amir_2532 ed356a7e31b0c4248a3514460637355d 464 Gene3D G3DSA:1.20.120.1690 319 421 7.6E-23 T 14-10-2018 Amir_2532 ed356a7e31b0c4248a3514460637355d 464 Gene3D G3DSA:2.60.40.3670 3 314 1.3E-104 T 14-10-2018 Amir_2532 ed356a7e31b0c4248a3514460637355d 464 Gene3D G3DSA:3.40.50.410 37 219 1.3E-104 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_2532 ed356a7e31b0c4248a3514460637355d 464 SMART SM00327 38 212 3.6E-12 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_2532 ed356a7e31b0c4248a3514460637355d 464 Pfam PF13768 von Willebrand factor type A domain 42 196 1.3E-15 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_2532 ed356a7e31b0c4248a3514460637355d 464 SUPERFAMILY SSF53300 38 216 5.25E-25 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_5726 7e9078cb0ef4764196743346af0fcea1 259 Gene3D G3DSA:3.60.110.10 1 258 3.8E-72 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amir_5726 7e9078cb0ef4764196743346af0fcea1 259 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 138 158 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site Amir_5726 7e9078cb0ef4764196743346af0fcea1 259 Pfam PF00795 Carbon-nitrogen hydrolase 2 248 1.7E-39 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Amir_5726 7e9078cb0ef4764196743346af0fcea1 259 SUPERFAMILY SSF56317 1 257 6.15E-66 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amir_5655 aa03b793f646e2c72860a3b53ca7ec1f 137 Pfam PF02675 S-adenosylmethionine decarboxylase 18 124 2.1E-34 T 14-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Amir_5655 aa03b793f646e2c72860a3b53ca7ec1f 137 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 12 128 24.989 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Amir_5655 aa03b793f646e2c72860a3b53ca7ec1f 137 Gene3D G3DSA:3.60.90.10 9 132 8.0E-36 T 14-10-2018 Amir_5655 aa03b793f646e2c72860a3b53ca7ec1f 137 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 15 124 3.8E-35 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Amir_5655 aa03b793f646e2c72860a3b53ca7ec1f 137 SUPERFAMILY SSF56276 15 125 1.26E-33 T 14-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 Amir_3189 919c8545dcce096bfa6005fe44bb8cfa 220 Gene3D G3DSA:3.40.50.150 3 219 4.0E-73 T 14-10-2018 Amir_3189 919c8545dcce096bfa6005fe44bb8cfa 220 Pfam PF01596 O-methyltransferase 22 218 3.3E-56 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 Amir_3189 919c8545dcce096bfa6005fe44bb8cfa 220 SUPERFAMILY SSF53335 8 218 7.03E-51 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3852 f23a42d4f070c287004b1baa832b7dfd 391 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 32 151 4.5E-8 T 14-10-2018 IPR000014 PAS domain Amir_3852 f23a42d4f070c287004b1baa832b7dfd 391 Gene3D G3DSA:3.30.450.20 25 141 1.5E-10 T 14-10-2018 Amir_3852 f23a42d4f070c287004b1baa832b7dfd 391 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 214 374 4.1E-27 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3852 f23a42d4f070c287004b1baa832b7dfd 391 SMART SM00331 184 388 1.9E-25 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3852 f23a42d4f070c287004b1baa832b7dfd 391 Pfam PF13426 PAS domain 38 140 3.4E-8 T 14-10-2018 IPR000014 PAS domain Amir_3852 f23a42d4f070c287004b1baa832b7dfd 391 Gene3D G3DSA:3.60.40.10 153 387 4.0E-46 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3852 f23a42d4f070c287004b1baa832b7dfd 391 SUPERFAMILY SSF81606 188 385 7.32E-10 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3852 f23a42d4f070c287004b1baa832b7dfd 391 SUPERFAMILY SSF55785 27 130 1.54E-11 T 14-10-2018 IPR035965 PAS domain superfamily Amir_5448 6883c7a53ca5bec625f5b9ad0d24b996 209 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 19 193 1.2E-62 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Amir_5448 6883c7a53ca5bec625f5b9ad0d24b996 209 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 10 199 30.049 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Amir_5448 6883c7a53ca5bec625f5b9ad0d24b996 209 Gene3D G3DSA:3.10.300.10 6 208 5.2E-64 T 14-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Amir_5448 6883c7a53ca5bec625f5b9ad0d24b996 209 SUPERFAMILY SSF50486 11 204 1.18E-58 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Amir_5448 6883c7a53ca5bec625f5b9ad0d24b996 209 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 14 197 7.2E-57 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Amir_5836 e827d70a905834263c90cd58344e22a2 337 SUPERFAMILY SSF54814 180 258 1.96E-26 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Amir_5836 e827d70a905834263c90cd58344e22a2 337 SUPERFAMILY SSF54814 259 323 2.29E-17 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Amir_5836 e827d70a905834263c90cd58344e22a2 337 Gene3D G3DSA:3.30.300.20 179 257 1.4E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Amir_5836 e827d70a905834263c90cd58344e22a2 337 Gene3D G3DSA:3.30.1480.10 1 99 2.1E-33 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Amir_5836 e827d70a905834263c90cd58344e22a2 337 Pfam PF08529 NusA N-terminal domain 66 100 8.8E-7 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Amir_5836 e827d70a905834263c90cd58344e22a2 337 Pfam PF08529 NusA N-terminal domain 6 60 9.4E-10 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Amir_5836 e827d70a905834263c90cd58344e22a2 337 SUPERFAMILY SSF50249 110 179 1.71E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_5836 e827d70a905834263c90cd58344e22a2 337 SUPERFAMILY SSF69705 4 99 7.46E-29 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Amir_5836 e827d70a905834263c90cd58344e22a2 337 Gene3D G3DSA:3.30.300.20 258 328 9.9E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Amir_5836 e827d70a905834263c90cd58344e22a2 337 Pfam PF13184 NusA-like KH domain 210 277 2.5E-24 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Amir_5836 e827d70a905834263c90cd58344e22a2 337 Gene3D G3DSA:2.40.50.140 105 178 6.9E-32 T 14-10-2018 Amir_5836 e827d70a905834263c90cd58344e22a2 337 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 337 26.578 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Amir_5836 e827d70a905834263c90cd58344e22a2 337 SMART SM00322 284 337 9.6 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Amir_5836 e827d70a905834263c90cd58344e22a2 337 SMART SM00322 210 283 0.088 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Amir_5836 e827d70a905834263c90cd58344e22a2 337 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 76 323 1.6E-100 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Amir_5836 e827d70a905834263c90cd58344e22a2 337 SMART SM00316 110 180 8.1E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 Amir_5085 6e14ad501b4d6ddf348cb4bd2545bbea 238 Pfam PF00775 Dioxygenase 46 227 1.2E-53 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 Amir_5085 6e14ad501b4d6ddf348cb4bd2545bbea 238 Gene3D G3DSA:2.60.130.10 6 237 3.1E-82 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Amir_5085 6e14ad501b4d6ddf348cb4bd2545bbea 238 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 78 106 - T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 Amir_5085 6e14ad501b4d6ddf348cb4bd2545bbea 238 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 16 233 3.1E-102 T 14-10-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 Amir_5085 6e14ad501b4d6ddf348cb4bd2545bbea 238 SUPERFAMILY SSF49482 9 233 4.19E-68 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Amir_5085 6e14ad501b4d6ddf348cb4bd2545bbea 238 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 9 42 7.9E-14 T 14-10-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 Amir_1790 adcf17576640d047d3ab67faea9c8136 79 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 67 3.3E-13 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Amir_1790 adcf17576640d047d3ab67faea9c8136 79 SUPERFAMILY SSF143120 1 68 2.35E-13 T 14-10-2018 IPR036165 YefM-like superfamily Amir_1790 adcf17576640d047d3ab67faea9c8136 79 Gene3D G3DSA:3.40.1620.40 1 52 4.4E-13 T 14-10-2018 Amir_1790 adcf17576640d047d3ab67faea9c8136 79 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 50 3.6E-7 T 14-10-2018 Amir_3761 b706fe92d2c579eb08017f0a1941fae9 274 Gene3D G3DSA:2.30.110.10 1 138 2.7E-50 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_3761 b706fe92d2c579eb08017f0a1941fae9 274 Pfam PF04075 F420H(2)-dependent quinone reductase 14 136 6.1E-36 T 14-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 Amir_3761 b706fe92d2c579eb08017f0a1941fae9 274 TIGRFAM TIGR00026 hi_GC_TIGR00026: deazaflavin-dependent oxidoreductase, nitroreductase family 25 135 5.8E-31 T 14-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 Amir_3761 b706fe92d2c579eb08017f0a1941fae9 274 Pfam PF01814 Hemerythrin HHE cation binding domain 152 273 5.4E-19 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Amir_3761 b706fe92d2c579eb08017f0a1941fae9 274 Gene3D G3DSA:1.20.120.520 141 274 1.4E-24 T 14-10-2018 Amir_3761 b706fe92d2c579eb08017f0a1941fae9 274 SUPERFAMILY SSF50475 26 130 1.61E-7 T 14-10-2018 Amir_6808 18034eb29d96e2bb6a0d149f91ea49b5 155 Pfam PF14231 GXWXG protein 28 85 2.8E-24 T 14-10-2018 IPR025951 GXWXG domain Amir_6808 18034eb29d96e2bb6a0d149f91ea49b5 155 Pfam PF14232 Domain of unknown function (DUF4334) 96 154 2.7E-26 T 14-10-2018 IPR025568 Domain of unknown function DUF4334 Amir_6808 18034eb29d96e2bb6a0d149f91ea49b5 155 Gene3D G3DSA:2.40.128.580 2 155 4.1E-51 T 14-10-2018 Amir_7043 1d765d653eda8ca45eaf403cc1d2d896 772 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 18 770 4.4E-156 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Amir_7043 1d765d653eda8ca45eaf403cc1d2d896 772 Gene3D G3DSA:3.40.50.300 543 771 1.5E-79 T 14-10-2018 Amir_7043 1d765d653eda8ca45eaf403cc1d2d896 772 Gene3D G3DSA:3.40.50.300 178 230 8.4E-11 T 14-10-2018 Amir_7043 1d765d653eda8ca45eaf403cc1d2d896 772 SUPERFAMILY SSF52540 546 756 9.49E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_7043 1d765d653eda8ca45eaf403cc1d2d896 772 SUPERFAMILY SSF48024 16 127 1.07E-36 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Amir_7043 1d765d653eda8ca45eaf403cc1d2d896 772 Gene3D G3DSA:1.10.860.10 10 176 2.6E-60 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Amir_7043 1d765d653eda8ca45eaf403cc1d2d896 772 SUPERFAMILY SSF52540 194 226 9.11E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_7043 1d765d653eda8ca45eaf403cc1d2d896 772 SUPERFAMILY SSF55608 413 472 2.89E-8 T 14-10-2018 IPR027434 Homing endonuclease Amir_7043 1d765d653eda8ca45eaf403cc1d2d896 772 Pfam PF00772 DnaB-like helicase N terminal domain 17 119 1.2E-33 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Amir_7043 1d765d653eda8ca45eaf403cc1d2d896 772 SUPERFAMILY SSF51294 228 545 2.55E-5 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amir_7043 1d765d653eda8ca45eaf403cc1d2d896 772 Pfam PF03796 DnaB-like helicase C terminal domain 195 262 6.1E-10 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Amir_7043 1d765d653eda8ca45eaf403cc1d2d896 772 Pfam PF03796 DnaB-like helicase C terminal domain 545 768 9.6E-84 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Amir_7043 1d765d653eda8ca45eaf403cc1d2d896 772 Gene3D G3DSA:3.10.28.10 319 503 1.8E-22 T 14-10-2018 IPR027434 Homing endonuclease Amir_0651 ce72a8bbdf075ebb378f1f6d80d58751 631 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 25 61 1.8E-9 T 14-10-2018 IPR019933 DivIVA domain Amir_0651 ce72a8bbdf075ebb378f1f6d80d58751 631 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 498 534 2.0E-13 T 14-10-2018 IPR019933 DivIVA domain Amir_0651 ce72a8bbdf075ebb378f1f6d80d58751 631 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 174 208 4.3E-6 T 14-10-2018 IPR019933 DivIVA domain Amir_0651 ce72a8bbdf075ebb378f1f6d80d58751 631 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 132 167 2.4E-11 T 14-10-2018 IPR019933 DivIVA domain Amir_0651 ce72a8bbdf075ebb378f1f6d80d58751 631 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 67 100 3.1E-8 T 14-10-2018 IPR019933 DivIVA domain Amir_0651 ce72a8bbdf075ebb378f1f6d80d58751 631 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 456 492 1.6E-9 T 14-10-2018 IPR019933 DivIVA domain Amir_6712 eed3f400d61405a4f1220682418387ba 321 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 91 318 1.2E-70 T 14-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 Amir_6712 eed3f400d61405a4f1220682418387ba 321 Pfam PF01578 Cytochrome C assembly protein 114 315 6.9E-47 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Amir_6674 9b108a390bf7b18b3df6b857aa4ec335 188 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 9 136 2.9E-40 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6674 9b108a390bf7b18b3df6b857aa4ec335 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 98 109 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amir_6674 9b108a390bf7b18b3df6b857aa4ec335 188 SUPERFAMILY SSF54862 26 141 3.14E-25 T 14-10-2018 Amir_6674 9b108a390bf7b18b3df6b857aa4ec335 188 Gene3D G3DSA:3.30.70.3270 26 175 2.0E-45 T 14-10-2018 Amir_6674 9b108a390bf7b18b3df6b857aa4ec335 188 Pfam PF12838 4Fe-4S dicluster domain 52 110 3.5E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amir_6674 9b108a390bf7b18b3df6b857aa4ec335 188 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 146 27.072 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6674 9b108a390bf7b18b3df6b857aa4ec335 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 53 64 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amir_4842 59c0b7bc1d4ea1f7ff4737780f9ead55 700 Gene3D G3DSA:3.40.50.1820 18 645 1.7E-144 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4842 59c0b7bc1d4ea1f7ff4737780f9ead55 700 Gene3D G3DSA:2.130.10.120 69 396 1.7E-144 T 14-10-2018 Amir_4842 59c0b7bc1d4ea1f7ff4737780f9ead55 700 SUPERFAMILY SSF53474 428 676 3.15E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4842 59c0b7bc1d4ea1f7ff4737780f9ead55 700 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 608 630 1.8E-29 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Amir_4842 59c0b7bc1d4ea1f7ff4737780f9ead55 700 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 589 604 1.8E-29 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Amir_4842 59c0b7bc1d4ea1f7ff4737780f9ead55 700 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 450 468 1.8E-29 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Amir_4842 59c0b7bc1d4ea1f7ff4737780f9ead55 700 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 504 523 1.8E-29 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Amir_4842 59c0b7bc1d4ea1f7ff4737780f9ead55 700 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 534 554 1.8E-29 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Amir_4842 59c0b7bc1d4ea1f7ff4737780f9ead55 700 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 476 500 1.8E-29 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Amir_4842 59c0b7bc1d4ea1f7ff4737780f9ead55 700 Pfam PF00326 Prolyl oligopeptidase family 467 677 1.4E-41 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Amir_4842 59c0b7bc1d4ea1f7ff4737780f9ead55 700 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 4 380 4.6E-30 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 Amir_4842 59c0b7bc1d4ea1f7ff4737780f9ead55 700 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 511 541 - T 14-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 Amir_4842 59c0b7bc1d4ea1f7ff4737780f9ead55 700 SUPERFAMILY SSF50993 3 381 1.83E-35 T 14-10-2018 Amir_6595 aa476babe8dbd59774e7b8a6b51f4b82 147 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 141 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6595 aa476babe8dbd59774e7b8a6b51f4b82 147 SUPERFAMILY SSF52080 7 146 6.54E-39 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Amir_6595 aa476babe8dbd59774e7b8a6b51f4b82 147 Gene3D G3DSA:3.100.10.10 67 147 2.3E-21 T 14-10-2018 Amir_6595 aa476babe8dbd59774e7b8a6b51f4b82 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 147 19.247 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Amir_6595 aa476babe8dbd59774e7b8a6b51f4b82 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 144 1.8E-42 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6595 aa476babe8dbd59774e7b8a6b51f4b82 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 145 1.4E-31 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P Amir_4038 3f1ec3231002f91a7b40c1064a8b2df8 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 448 1.4E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4038 3f1ec3231002f91a7b40c1064a8b2df8 451 Gene3D G3DSA:3.30.565.10 306 450 1.1E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4038 3f1ec3231002f91a7b40c1064a8b2df8 451 SMART SM00304 181 233 3.8E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_4038 3f1ec3231002f91a7b40c1064a8b2df8 451 SUPERFAMILY SSF55874 310 447 1.01E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4038 3f1ec3231002f91a7b40c1064a8b2df8 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 298 6.7E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_4038 3f1ec3231002f91a7b40c1064a8b2df8 451 SMART SM00387 339 450 6.4E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4038 3f1ec3231002f91a7b40c1064a8b2df8 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 6.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4038 3f1ec3231002f91a7b40c1064a8b2df8 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 6.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4038 3f1ec3231002f91a7b40c1064a8b2df8 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 447 6.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4038 3f1ec3231002f91a7b40c1064a8b2df8 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 6.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4038 3f1ec3231002f91a7b40c1064a8b2df8 451 SUPERFAMILY SSF47384 217 298 2.75E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_4038 3f1ec3231002f91a7b40c1064a8b2df8 451 SMART SM00388 234 301 1.2E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_4038 3f1ec3231002f91a7b40c1064a8b2df8 451 Gene3D G3DSA:1.10.287.130 185 302 1.0E-26 T 14-10-2018 Amir_4038 3f1ec3231002f91a7b40c1064a8b2df8 451 SUPERFAMILY SSF158472 184 230 4.58E-8 T 14-10-2018 Amir_4038 3f1ec3231002f91a7b40c1064a8b2df8 451 Pfam PF00672 HAMP domain 183 230 5.2E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_1455 a87aae8eb60941d56621f98668e6ba62 219 SUPERFAMILY SSF109854 3 139 2.84E-29 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_1455 a87aae8eb60941d56621f98668e6ba62 219 Gene3D G3DSA:1.20.120.450 3 141 9.9E-31 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_1455 a87aae8eb60941d56621f98668e6ba62 219 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 9 200 2.0E-28 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type Amir_1455 a87aae8eb60941d56621f98668e6ba62 219 SUPERFAMILY SSF55718 144 218 1.41E-12 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Amir_1455 a87aae8eb60941d56621f98668e6ba62 219 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 9 137 1.7E-17 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 Amir_3205 d2d6ed5e6216a3d91dec87ae564fca88 210 Pfam PF13649 Methyltransferase domain 50 140 1.1E-18 T 14-10-2018 Amir_3205 d2d6ed5e6216a3d91dec87ae564fca88 210 SUPERFAMILY SSF53335 8 185 4.6E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3205 d2d6ed5e6216a3d91dec87ae564fca88 210 Gene3D G3DSA:3.40.50.150 5 204 2.4E-55 T 14-10-2018 Amir_6717 9c21fedf39de976ece24c0bc7b0dcd89 195 SUPERFAMILY SSF52833 56 194 3.05E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_6717 9c21fedf39de976ece24c0bc7b0dcd89 195 Pfam PF00578 AhpC/TSA family 66 174 1.6E-21 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amir_6717 9c21fedf39de976ece24c0bc7b0dcd89 195 ProSitePatterns PS00194 Thioredoxin family active site. 82 100 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Amir_6717 9c21fedf39de976ece24c0bc7b0dcd89 195 Gene3D G3DSA:3.40.30.10 46 193 1.0E-36 T 14-10-2018 Amir_2685 4c66ef1b7c85a888dcb069792ada24d6 296 Pfam PF00561 alpha/beta hydrolase fold 29 282 1.6E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_2685 4c66ef1b7c85a888dcb069792ada24d6 296 SUPERFAMILY SSF53474 9 294 1.62E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2685 4c66ef1b7c85a888dcb069792ada24d6 296 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 8 293 3.9E-72 T 14-10-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Amir_2685 4c66ef1b7c85a888dcb069792ada24d6 296 PIRSF PIRSF005539 1 296 7.9E-109 T 14-10-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Amir_2685 4c66ef1b7c85a888dcb069792ada24d6 296 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 31 39 3.2E-10 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Amir_2685 4c66ef1b7c85a888dcb069792ada24d6 296 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 58 69 3.2E-10 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Amir_2685 4c66ef1b7c85a888dcb069792ada24d6 296 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 104 118 3.2E-10 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Amir_2685 4c66ef1b7c85a888dcb069792ada24d6 296 Gene3D G3DSA:3.40.50.1820 3 294 5.4E-90 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3597 ab2b7cf23e7b86fffe7fcf6a91161e5f 155 SUPERFAMILY SSF54534 67 139 1.03E-8 T 14-10-2018 Amir_3597 ab2b7cf23e7b86fffe7fcf6a91161e5f 155 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 68 140 1.4E-9 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Amir_3597 ab2b7cf23e7b86fffe7fcf6a91161e5f 155 Gene3D G3DSA:3.10.50.30 66 147 3.9E-7 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Amir_3597 ab2b7cf23e7b86fffe7fcf6a91161e5f 155 PIRSF PIRSF006092 1 143 5.8E-11 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Amir_4591 b1b416f8b398ca5aa2a586afb2208166 431 Gene3D G3DSA:3.40.640.10 80 313 1.5E-94 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_4591 b1b416f8b398ca5aa2a586afb2208166 431 Gene3D G3DSA:3.90.1150.10 30 421 1.5E-94 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_4591 b1b416f8b398ca5aa2a586afb2208166 431 Pfam PF00155 Aminotransferase class I and II 72 420 7.4E-24 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_4591 b1b416f8b398ca5aa2a586afb2208166 431 SUPERFAMILY SSF53383 27 426 2.62E-69 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_6179 c7d63087f0b2a1829e98ddd166a76b71 284 SUPERFAMILY SSF53822 10 264 1.37E-53 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_6179 c7d63087f0b2a1829e98ddd166a76b71 284 Pfam PF13377 Periplasmic binding protein-like domain 123 279 5.0E-30 T 14-10-2018 Amir_6179 c7d63087f0b2a1829e98ddd166a76b71 284 Gene3D G3DSA:3.40.50.2300 29 262 3.3E-58 T 14-10-2018 Amir_6179 c7d63087f0b2a1829e98ddd166a76b71 284 Gene3D G3DSA:3.40.50.2300 114 240 3.3E-58 T 14-10-2018 Amir_1363 9fc7855d074e668131bbb977660480ca 212 Pfam PF11241 Protein of unknown function (DUF3043) 34 208 4.8E-59 T 14-10-2018 IPR021403 Protein of unknown function DUF3043 Amir_1764 a198927c3062dd6669027e4380f7df1f 284 SUPERFAMILY SSF53474 70 228 1.55E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1764 a198927c3062dd6669027e4380f7df1f 284 Gene3D G3DSA:3.40.50.1820 75 265 1.0E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1015 0220be150242e3e63274ea35c36d9bf9 264 SUPERFAMILY SSF53681 111 253 1.03E-38 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amir_1015 0220be150242e3e63274ea35c36d9bf9 264 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 72 80 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amir_1015 0220be150242e3e63274ea35c36d9bf9 264 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 181 191 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amir_1015 0220be150242e3e63274ea35c36d9bf9 264 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 216 9.7E-33 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amir_1015 0220be150242e3e63274ea35c36d9bf9 264 Hamap MF_00258 Glutamate racemase [murI]. 6 255 36.555 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amir_1015 0220be150242e3e63274ea35c36d9bf9 264 TIGRFAM TIGR00067 glut_race: glutamate racemase 8 251 1.3E-69 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amir_1015 0220be150242e3e63274ea35c36d9bf9 264 Gene3D G3DSA:3.40.50.1860 97 208 2.1E-90 T 14-10-2018 Amir_1015 0220be150242e3e63274ea35c36d9bf9 264 SUPERFAMILY SSF53681 7 109 3.6E-33 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amir_1015 0220be150242e3e63274ea35c36d9bf9 264 Gene3D G3DSA:3.40.50.1860 7 252 2.1E-90 T 14-10-2018 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 Pfam PF00067 Cytochrome P450 188 368 1.3E-27 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 Gene3D G3DSA:1.10.630.10 5 400 4.2E-122 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 PRINTS PR00359 B-class P450 signature 140 156 4.6E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 PRINTS PR00359 B-class P450 signature 93 104 4.6E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 PRINTS PR00359 B-class P450 signature 157 172 4.6E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 PRINTS PR00359 B-class P450 signature 317 332 4.6E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 PRINTS PR00359 B-class P450 signature 194 216 4.6E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 PRINTS PR00359 B-class P450 signature 289 316 4.6E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 PRINTS PR00359 B-class P450 signature 347 358 4.6E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 PRINTS PR00359 B-class P450 signature 271 282 4.6E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 PRINTS PR00359 B-class P450 signature 338 347 4.6E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 340 349 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 SUPERFAMILY SSF48264 12 398 2.23E-96 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 PRINTS PR00385 P450 superfamily signature 271 282 1.4E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 PRINTS PR00385 P450 superfamily signature 236 253 1.4E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 PRINTS PR00385 P450 superfamily signature 347 358 1.4E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1302 0270f19eea8c848376f5fa62f594d5b5 400 PRINTS PR00385 P450 superfamily signature 338 347 1.4E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1954 c2f3e2d778060901900c45eb70c0bedc 570 TIGRFAM TIGR04215 choice_anch_A: choice-of-anchor A domain 72 347 1.4E-58 T 14-10-2018 IPR026588 Choice-of-anchor A domain Amir_3550 51462fb9c1c4b2a98703db1b04a8200d 372 Pfam PF01183 Glycosyl hydrolases family 25 31 190 2.0E-18 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 Amir_3550 51462fb9c1c4b2a98703db1b04a8200d 372 SMART SM00641 28 130 2.3E-10 T 14-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup Amir_3550 51462fb9c1c4b2a98703db1b04a8200d 372 Gene3D G3DSA:3.20.20.80 25 232 5.0E-33 T 14-10-2018 Amir_3550 51462fb9c1c4b2a98703db1b04a8200d 372 SUPERFAMILY SSF51445 28 230 5.33E-32 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_6908 4ca99424c242d935595ae8647a0ee7d2 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 199.789 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Amir_6908 4ca99424c242d935595ae8647a0ee7d2 429 SMART SM00788 3 423 1.5E-274 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Amir_6908 4ca99424c242d935595ae8647a0ee7d2 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 427 3.2E-162 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Amir_6908 4ca99424c242d935595ae8647a0ee7d2 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Amir_6908 4ca99424c242d935595ae8647a0ee7d2 429 Gene3D G3DSA:3.90.170.10 266 429 1.9E-68 T 14-10-2018 Amir_6908 4ca99424c242d935595ae8647a0ee7d2 429 SUPERFAMILY SSF52540 1 427 6.48E-168 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6908 4ca99424c242d935595ae8647a0ee7d2 429 Gene3D G3DSA:3.40.440.10 7 256 1.2E-95 T 14-10-2018 Amir_6908 4ca99424c242d935595ae8647a0ee7d2 429 Gene3D G3DSA:1.10.300.10 101 200 1.2E-95 T 14-10-2018 Amir_6908 4ca99424c242d935595ae8647a0ee7d2 429 Pfam PF00709 Adenylosuccinate synthetase 4 422 3.2E-174 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Amir_6908 4ca99424c242d935595ae8647a0ee7d2 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 132 143 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Amir_1080 7f26702b38f524c7ce754ad039d297ec 215 Gene3D G3DSA:3.40.50.150 12 203 6.0E-38 T 14-10-2018 Amir_1080 7f26702b38f524c7ce754ad039d297ec 215 SUPERFAMILY SSF53335 10 215 1.47E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_1080 7f26702b38f524c7ce754ad039d297ec 215 Pfam PF13649 Methyltransferase domain 52 143 3.7E-17 T 14-10-2018 Amir_7048 7e39c2066ba1b578ce25c7c085026abc 260 Pfam PF00990 Diguanylate cyclase, GGDEF domain 109 208 1.4E-23 T 14-10-2018 IPR000160 GGDEF domain Amir_7048 7e39c2066ba1b578ce25c7c085026abc 260 Gene3D G3DSA:3.30.70.270 108 260 2.9E-28 T 14-10-2018 Amir_7048 7e39c2066ba1b578ce25c7c085026abc 260 SUPERFAMILY SSF55073 112 249 7.85E-24 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_7048 7e39c2066ba1b578ce25c7c085026abc 260 SMART SM00267 95 260 7.5E-16 T 14-10-2018 IPR000160 GGDEF domain Amir_7048 7e39c2066ba1b578ce25c7c085026abc 260 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 108 203 9.7E-20 T 14-10-2018 IPR000160 GGDEF domain Amir_6465 e5025cfa118b50bf94679ec2f9271065 260 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amir_6465 e5025cfa118b50bf94679ec2f9271065 260 SUPERFAMILY SSF46548 131 256 1.34E-32 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amir_6465 e5025cfa118b50bf94679ec2f9271065 260 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 29 252 2.5E-75 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_6465 e5025cfa118b50bf94679ec2f9271065 260 Gene3D G3DSA:1.10.1060.10 131 259 5.8E-47 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amir_6465 e5025cfa118b50bf94679ec2f9271065 260 SUPERFAMILY SSF54292 23 130 6.13E-27 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amir_6465 e5025cfa118b50bf94679ec2f9271065 260 Gene3D G3DSA:3.10.20.30 19 130 5.5E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Amir_6465 e5025cfa118b50bf94679ec2f9271065 260 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 26 136 2.4E-33 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_6465 e5025cfa118b50bf94679ec2f9271065 260 Pfam PF13183 4Fe-4S dicluster domain 170 242 1.0E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amir_2234 3fa23d6ff87393ccf7b8ca675832e0f6 304 SUPERFAMILY SSF52540 2 221 1.09E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2234 3fa23d6ff87393ccf7b8ca675832e0f6 304 SMART SM00382 28 206 6.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2234 3fa23d6ff87393ccf7b8ca675832e0f6 304 Gene3D G3DSA:3.40.50.300 2 248 1.2E-58 T 14-10-2018 Amir_2234 3fa23d6ff87393ccf7b8ca675832e0f6 304 Pfam PF00005 ABC transporter 20 158 9.0E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2234 3fa23d6ff87393ccf7b8ca675832e0f6 304 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_2013 90bb98d54179ac0eed1e08dc6480ac0c 475 Gene3D G3DSA:3.50.50.60 3 333 1.1E-124 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2013 90bb98d54179ac0eed1e08dc6480ac0c 475 Gene3D G3DSA:3.30.70.2450 173 258 1.1E-124 T 14-10-2018 Amir_2013 90bb98d54179ac0eed1e08dc6480ac0c 475 Pfam PF01494 FAD binding domain 2 335 1.1E-90 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_2013 90bb98d54179ac0eed1e08dc6480ac0c 475 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 320 4.9E-45 T 14-10-2018 Amir_2013 90bb98d54179ac0eed1e08dc6480ac0c 475 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 269 284 4.9E-45 T 14-10-2018 Amir_2013 90bb98d54179ac0eed1e08dc6480ac0c 475 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 336 4.9E-45 T 14-10-2018 Amir_2013 90bb98d54179ac0eed1e08dc6480ac0c 475 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 4.9E-45 T 14-10-2018 Amir_2013 90bb98d54179ac0eed1e08dc6480ac0c 475 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 144 159 4.9E-45 T 14-10-2018 Amir_2013 90bb98d54179ac0eed1e08dc6480ac0c 475 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 300 4.9E-45 T 14-10-2018 Amir_2013 90bb98d54179ac0eed1e08dc6480ac0c 475 Gene3D G3DSA:3.40.30.120 380 473 1.1E-29 T 14-10-2018 Amir_2013 90bb98d54179ac0eed1e08dc6480ac0c 475 SUPERFAMILY SSF51905 2 349 1.13E-64 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5968 b327a36d0f53edc8f510fece8de836c3 160 SUPERFAMILY SSF52374 1 154 9.12E-42 T 14-10-2018 Amir_5968 b327a36d0f53edc8f510fece8de836c3 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 60 4.0E-17 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Amir_5968 b327a36d0f53edc8f510fece8de836c3 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 155 6.6E-60 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Amir_5968 b327a36d0f53edc8f510fece8de836c3 160 Pfam PF01467 Cytidylyltransferase-like 6 131 8.6E-17 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Amir_5968 b327a36d0f53edc8f510fece8de836c3 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 157 33.593 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Amir_5968 b327a36d0f53edc8f510fece8de836c3 160 Gene3D G3DSA:3.40.50.620 1 160 6.4E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_5968 b327a36d0f53edc8f510fece8de836c3 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 111 133 2.4E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Amir_5968 b327a36d0f53edc8f510fece8de836c3 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 2.4E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Amir_5968 b327a36d0f53edc8f510fece8de836c3 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 2.4E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Amir_5968 b327a36d0f53edc8f510fece8de836c3 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 2.4E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Amir_5968 b327a36d0f53edc8f510fece8de836c3 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 2.4E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Amir_2897 5f45770ab9ea9bb0ef9d30a14092ab51 571 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 319 3.3E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2897 5f45770ab9ea9bb0ef9d30a14092ab51 571 SMART SM00388 258 322 2.1E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_2897 5f45770ab9ea9bb0ef9d30a14092ab51 571 SUPERFAMILY SSF47384 242 319 1.08E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_2897 5f45770ab9ea9bb0ef9d30a14092ab51 571 Gene3D G3DSA:1.10.287.130 209 322 2.2E-17 T 14-10-2018 Amir_2897 5f45770ab9ea9bb0ef9d30a14092ab51 571 SUPERFAMILY SSF55874 325 406 3.85E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2897 5f45770ab9ea9bb0ef9d30a14092ab51 571 SMART SM00304 205 257 3.8E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5909 9a0f8dbdc359d9dafb3638a29bb047fa 263 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 24 255 1.2E-87 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Amir_5909 9a0f8dbdc359d9dafb3638a29bb047fa 263 PIRSF PIRSF005650 20 262 4.7E-87 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Amir_5909 9a0f8dbdc359d9dafb3638a29bb047fa 263 Pfam PF00696 Amino acid kinase family 26 234 1.2E-31 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Amir_5909 9a0f8dbdc359d9dafb3638a29bb047fa 263 Hamap MF_01220_B Uridylate kinase [pyrH]. 22 255 42.476 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Amir_5909 9a0f8dbdc359d9dafb3638a29bb047fa 263 SUPERFAMILY SSF53633 24 254 9.43E-71 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amir_5909 9a0f8dbdc359d9dafb3638a29bb047fa 263 Gene3D G3DSA:3.40.1160.10 20 257 1.3E-77 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amir_0646 a36edfa7ba3434191ed22b80ea1c67e0 333 Gene3D G3DSA:3.40.50.300 1 256 1.9E-80 T 14-10-2018 Amir_0646 a36edfa7ba3434191ed22b80ea1c67e0 333 Pfam PF00005 ABC transporter 18 166 1.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0646 a36edfa7ba3434191ed22b80ea1c67e0 333 SUPERFAMILY SSF52540 1 231 4.22E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0646 a36edfa7ba3434191ed22b80ea1c67e0 333 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0646 a36edfa7ba3434191ed22b80ea1c67e0 333 Pfam PF09383 NIL domain 256 318 4.5E-7 T 14-10-2018 IPR018449 NIL domain Amir_0646 a36edfa7ba3434191ed22b80ea1c67e0 333 SMART SM00930 251 324 5.3E-8 T 14-10-2018 IPR018449 NIL domain Amir_0646 a36edfa7ba3434191ed22b80ea1c67e0 333 SUPERFAMILY SSF55021 250 321 3.32E-7 T 14-10-2018 Amir_0646 a36edfa7ba3434191ed22b80ea1c67e0 333 SMART SM00382 27 223 6.4E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6188 45ecc64deca1067eaf21205f811c4fb6 560 Gene3D G3DSA:3.90.76.10 70 174 1.1E-134 T 14-10-2018 Amir_6188 45ecc64deca1067eaf21205f811c4fb6 560 Gene3D G3DSA:3.40.190.10 53 543 1.1E-134 T 14-10-2018 Amir_6188 45ecc64deca1067eaf21205f811c4fb6 560 SUPERFAMILY SSF53850 37 543 1.01E-87 T 14-10-2018 Amir_6188 45ecc64deca1067eaf21205f811c4fb6 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 454 9.3E-63 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Amir_6188 45ecc64deca1067eaf21205f811c4fb6 560 PIRSF PIRSF002741 5 548 1.4E-60 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amir_6188 45ecc64deca1067eaf21205f811c4fb6 560 Gene3D G3DSA:3.10.105.10 271 519 1.1E-134 T 14-10-2018 Amir_5525 589fc3b6261a0efe4817eb93f4025a6a 211 Gene3D G3DSA:3.40.50.300 11 194 1.1E-8 T 14-10-2018 Amir_5525 589fc3b6261a0efe4817eb93f4025a6a 211 SUPERFAMILY SSF52540 15 156 8.79E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5054 068a1db9666d692de27b14097626ad89 343 Pfam PF01032 FecCD transport family 28 334 2.9E-78 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_5054 068a1db9666d692de27b14097626ad89 343 Gene3D G3DSA:1.10.3470.10 15 341 5.6E-83 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_5054 068a1db9666d692de27b14097626ad89 343 SUPERFAMILY SSF81345 12 333 4.32E-68 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_1681 84510828402daf13e1bd3ea3d468c830 358 SUPERFAMILY SSF161098 92 270 1.18E-17 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1681 84510828402daf13e1bd3ea3d468c830 358 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 292 2.3E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_1681 84510828402daf13e1bd3ea3d468c830 358 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 63 1.5E-9 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Amir_1681 84510828402daf13e1bd3ea3d468c830 358 Gene3D G3DSA:1.10.3720.10 77 292 2.2E-14 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4516 6c1bb6bfb540b08451cd8024b08e1540 349 Gene3D G3DSA:3.40.50.1110 39 244 2.6E-68 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_4516 6c1bb6bfb540b08451cd8024b08e1540 349 SUPERFAMILY SSF49384 249 343 1.6E-21 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_4516 6c1bb6bfb540b08451cd8024b08e1540 349 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 47 219 2.6E-21 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_4516 6c1bb6bfb540b08451cd8024b08e1540 349 Pfam PF00553 Cellulose binding domain 255 341 5.3E-17 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_4516 6c1bb6bfb540b08451cd8024b08e1540 349 SMART SM00637 255 346 7.1E-23 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_4516 6c1bb6bfb540b08451cd8024b08e1540 349 Gene3D G3DSA:2.60.40.290 251 348 1.7E-21 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_4516 6c1bb6bfb540b08451cd8024b08e1540 349 SUPERFAMILY SSF52266 33 231 1.55E-35 T 14-10-2018 Amir_1526 c75f0876fcbe564d754c5c4e66aafa35 225 Gene3D G3DSA:1.10.10.10 124 222 3.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1526 c75f0876fcbe564d754c5c4e66aafa35 225 Gene3D G3DSA:3.40.50.2300 1 121 1.3E-34 T 14-10-2018 Amir_1526 c75f0876fcbe564d754c5c4e66aafa35 225 SUPERFAMILY SSF52172 2 172 1.57E-36 T 14-10-2018 IPR011006 CheY-like superfamily Amir_1526 c75f0876fcbe564d754c5c4e66aafa35 225 SMART SM00448 1 112 2.9E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1526 c75f0876fcbe564d754c5c4e66aafa35 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 9.4E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_1526 c75f0876fcbe564d754c5c4e66aafa35 225 Pfam PF00072 Response regulator receiver domain 3 113 5.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1526 c75f0876fcbe564d754c5c4e66aafa35 225 SMART SM00862 145 217 1.9E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_5444 e8befb2e895d01e57fef5877295b13da 918 Gene3D G3DSA:1.25.40.10 716 918 8.8E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5444 e8befb2e895d01e57fef5877295b13da 918 SUPERFAMILY SSF48452 766 915 3.48E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4739 c060bc778ffa928207c5f3852cd8d236 98 SUPERFAMILY SSF140453 4 88 5.62E-5 T 14-10-2018 IPR036689 ESAT-6-like superfamily Amir_3389 f8f87b062d470f614bd51c39ba30dfb4 187 Gene3D G3DSA:1.10.357.10 2 185 9.6E-23 T 14-10-2018 Amir_3389 f8f87b062d470f614bd51c39ba30dfb4 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 5.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3389 f8f87b062d470f614bd51c39ba30dfb4 187 SUPERFAMILY SSF46689 3 72 7.18E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3389 f8f87b062d470f614bd51c39ba30dfb4 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 4.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3389 f8f87b062d470f614bd51c39ba30dfb4 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 4.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1713 a5b57959c58fb0ae9261cb2680fad5a9 676 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 311 1.5E-59 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_1713 a5b57959c58fb0ae9261cb2680fad5a9 676 SMART SM00878 323 427 2.9E-49 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_1713 a5b57959c58fb0ae9261cb2680fad5a9 676 SUPERFAMILY SSF51246 317 431 6.28E-36 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Amir_1713 a5b57959c58fb0ae9261cb2680fad5a9 676 SUPERFAMILY SSF51230 557 632 1.07E-19 T 14-10-2018 IPR011053 Single hybrid motif Amir_1713 a5b57959c58fb0ae9261cb2680fad5a9 676 Gene3D G3DSA:3.30.470.130 1 434 2.4E-177 T 14-10-2018 Amir_1713 a5b57959c58fb0ae9261cb2680fad5a9 676 Pfam PF02785 Biotin carboxylase C-terminal domain 323 428 1.2E-32 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_1713 a5b57959c58fb0ae9261cb2680fad5a9 676 SUPERFAMILY SSF52440 1 113 7.91E-42 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amir_1713 a5b57959c58fb0ae9261cb2680fad5a9 676 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 275 282 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_1713 a5b57959c58fb0ae9261cb2680fad5a9 676 SUPERFAMILY SSF56059 83 320 3.36E-62 T 14-10-2018 Amir_1713 a5b57959c58fb0ae9261cb2680fad5a9 676 Pfam PF00364 Biotin-requiring enzyme 567 631 7.9E-15 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Amir_1713 a5b57959c58fb0ae9261cb2680fad5a9 676 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 588 605 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_1713 a5b57959c58fb0ae9261cb2680fad5a9 676 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 142 156 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amir_1713 a5b57959c58fb0ae9261cb2680fad5a9 676 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.2E-39 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_1713 a5b57959c58fb0ae9261cb2680fad5a9 676 Gene3D G3DSA:2.40.50.100 566 633 3.8E-20 T 14-10-2018 Amir_4732 a7358059b6dd7b05ee0b229b6fa72d77 451 Gene3D G3DSA:2.60.40.290 362 451 2.9E-21 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_4732 a7358059b6dd7b05ee0b229b6fa72d77 451 Pfam PF00331 Glycosyl hydrolase family 10 39 334 5.4E-106 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_4732 a7358059b6dd7b05ee0b229b6fa72d77 451 Gene3D G3DSA:3.20.20.80 35 347 2.3E-117 T 14-10-2018 Amir_4732 a7358059b6dd7b05ee0b229b6fa72d77 451 SUPERFAMILY SSF49384 362 451 1.33E-17 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_4732 a7358059b6dd7b05ee0b229b6fa72d77 451 SUPERFAMILY SSF51445 39 339 9.55E-105 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_4732 a7358059b6dd7b05ee0b229b6fa72d77 451 PRINTS PR00134 Glycosyl hydrolase family 10 signature 154 165 6.2E-17 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_4732 a7358059b6dd7b05ee0b229b6fa72d77 451 PRINTS PR00134 Glycosyl hydrolase family 10 signature 112 124 6.2E-17 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_4732 a7358059b6dd7b05ee0b229b6fa72d77 451 PRINTS PR00134 Glycosyl hydrolase family 10 signature 199 210 6.2E-17 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_4732 a7358059b6dd7b05ee0b229b6fa72d77 451 PRINTS PR00134 Glycosyl hydrolase family 10 signature 229 241 6.2E-17 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_4732 a7358059b6dd7b05ee0b229b6fa72d77 451 SMART SM00637 365 448 5.5E-14 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_4732 a7358059b6dd7b05ee0b229b6fa72d77 451 SMART SM00633 81 337 3.3E-125 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_4732 a7358059b6dd7b05ee0b229b6fa72d77 451 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 263 273 - T 14-10-2018 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_6688 6ae670f20ae40703907078a8a9df4d3f 341 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 288 296 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Amir_6688 6ae670f20ae40703907078a8a9df4d3f 341 Pfam PF00175 Oxidoreductase NAD-binding domain 107 215 5.9E-14 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Amir_6688 6ae670f20ae40703907078a8a9df4d3f 341 SUPERFAMILY SSF52343 101 234 2.1E-29 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amir_6688 6ae670f20ae40703907078a8a9df4d3f 341 Gene3D G3DSA:3.10.20.30 249 341 2.2E-24 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Amir_6688 6ae670f20ae40703907078a8a9df4d3f 341 SUPERFAMILY SSF63380 2 95 1.02E-15 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amir_6688 6ae670f20ae40703907078a8a9df4d3f 341 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 258 330 1.5E-12 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Amir_6688 6ae670f20ae40703907078a8a9df4d3f 341 Gene3D G3DSA:3.40.50.80 102 235 6.2E-26 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amir_6688 6ae670f20ae40703907078a8a9df4d3f 341 Gene3D G3DSA:2.40.30.10 2 95 1.6E-15 T 14-10-2018 Amir_6688 6ae670f20ae40703907078a8a9df4d3f 341 SUPERFAMILY SSF54292 223 338 3.8E-24 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amir_6920 19e3825ed60fba76124387f9d663fec5 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 7.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6920 19e3825ed60fba76124387f9d663fec5 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 100 111 7.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6920 19e3825ed60fba76124387f9d663fec5 309 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 30 201 3.3E-5 T 14-10-2018 Amir_6920 19e3825ed60fba76124387f9d663fec5 309 Gene3D G3DSA:3.40.50.720 19 290 4.1E-59 T 14-10-2018 Amir_6920 19e3825ed60fba76124387f9d663fec5 309 SUPERFAMILY SSF51735 27 279 5.03E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6920 19e3825ed60fba76124387f9d663fec5 309 Pfam PF00106 short chain dehydrogenase 30 215 3.1E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6920 19e3825ed60fba76124387f9d663fec5 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 100 111 2.0E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6920 19e3825ed60fba76124387f9d663fec5 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 2.0E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6920 19e3825ed60fba76124387f9d663fec5 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 2.0E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6920 19e3825ed60fba76124387f9d663fec5 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 31 48 2.0E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2226 26636ce8a6015170a2fe50b850d2e1f0 370 Pfam PF07730 Histidine kinase 175 240 4.0E-17 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_2226 26636ce8a6015170a2fe50b850d2e1f0 370 Gene3D G3DSA:3.30.565.10 242 370 2.3E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2226 26636ce8a6015170a2fe50b850d2e1f0 370 SUPERFAMILY SSF55874 245 356 8.28E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0435 01ba88a058ad1675f0b59aca210cdef4 325 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 16 181 7.4E-36 T 14-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 Amir_0435 01ba88a058ad1675f0b59aca210cdef4 325 Gene3D G3DSA:1.20.120.1760 2 148 2.5E-14 T 14-10-2018 Amir_0435 01ba88a058ad1675f0b59aca210cdef4 325 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 52 74 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amir_0435 01ba88a058ad1675f0b59aca210cdef4 325 Pfam PF01066 CDP-alcohol phosphatidyltransferase 11 74 7.7E-12 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amir_0435 01ba88a058ad1675f0b59aca210cdef4 325 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 193 229 2.9E-5 T 14-10-2018 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal Amir_6373 727ff25830b02d619e28679c079d6905 286 SUPERFAMILY SSF47413 8 73 7.82E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_6373 727ff25830b02d619e28679c079d6905 286 Pfam PF13560 Helix-turn-helix domain 11 72 1.7E-10 T 14-10-2018 Amir_6696 e448edb60ffcfc648474076d2c0b9587 359 Gene3D G3DSA:3.40.50.1100 55 161 1.5E-67 T 14-10-2018 Amir_6696 e448edb60ffcfc648474076d2c0b9587 359 SUPERFAMILY SSF53686 28 339 2.1E-69 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amir_6696 e448edb60ffcfc648474076d2c0b9587 359 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 38 320 1.4E-43 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amir_6696 e448edb60ffcfc648474076d2c0b9587 359 Gene3D G3DSA:3.40.50.1100 40 327 1.5E-67 T 14-10-2018 Amir_4110 e9f4e5e4eeef3c11341e3bcdb2490d8d 432 Gene3D G3DSA:3.40.366.20 28 417 5.2E-76 T 14-10-2018 Amir_4110 e9f4e5e4eeef3c11341e3bcdb2490d8d 432 SUPERFAMILY SSF55048 223 285 1.83E-9 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_4110 e9f4e5e4eeef3c11341e3bcdb2490d8d 432 Pfam PF00698 Acyl transferase domain 145 359 2.8E-23 T 14-10-2018 IPR014043 Acyl transferase Amir_4110 e9f4e5e4eeef3c11341e3bcdb2490d8d 432 SUPERFAMILY SSF52151 119 387 4.71E-39 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_4110 e9f4e5e4eeef3c11341e3bcdb2490d8d 432 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 123 392 1.3E-19 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_2528 2f4fd3a047b2bc4119c73b5a8b7bcaa7 293 SUPERFAMILY SSF46955 2 102 1.54E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_2528 2f4fd3a047b2bc4119c73b5a8b7bcaa7 293 Pfam PF06445 GyrI-like small molecule binding domain 120 283 2.0E-9 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain Amir_2528 2f4fd3a047b2bc4119c73b5a8b7bcaa7 293 SUPERFAMILY SSF55136 120 283 2.88E-14 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amir_2528 2f4fd3a047b2bc4119c73b5a8b7bcaa7 293 Gene3D G3DSA:1.10.1660.10 1 119 1.3E-24 T 14-10-2018 Amir_2528 2f4fd3a047b2bc4119c73b5a8b7bcaa7 293 Gene3D G3DSA:3.20.80.10 120 285 2.3E-23 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amir_2528 2f4fd3a047b2bc4119c73b5a8b7bcaa7 293 Pfam PF13411 MerR HTH family regulatory protein 3 70 1.0E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_2528 2f4fd3a047b2bc4119c73b5a8b7bcaa7 293 SMART SM00871 119 284 1.3E-11 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding Amir_2528 2f4fd3a047b2bc4119c73b5a8b7bcaa7 293 SMART SM00422 2 72 9.7E-20 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6493 a7f6a7beecef1af616647aa340adbf51 204 Gene3D G3DSA:2.160.20.100 20 204 1.3E-55 T 14-10-2018 Amir_6493 a7f6a7beecef1af616647aa340adbf51 204 Pfam PF00805 Pentapeptide repeats (8 copies) 134 171 2.5E-13 T 14-10-2018 IPR001646 Pentapeptide repeat Amir_6493 a7f6a7beecef1af616647aa340adbf51 204 SUPERFAMILY SSF141571 29 202 2.55E-43 T 14-10-2018 Amir_6493 a7f6a7beecef1af616647aa340adbf51 204 Pfam PF13599 Pentapeptide repeats (9 copies) 49 118 3.4E-10 T 14-10-2018 IPR001646 Pentapeptide repeat Amir_5953 9b7acb4bc05dd10165e597b6a30e6cdf 270 Gene3D G3DSA:1.10.10.1320 4 60 3.5E-16 T 14-10-2018 Amir_5953 9b7acb4bc05dd10165e597b6a30e6cdf 270 Pfam PF13490 Putative zinc-finger 11 36 2.9E-7 T 14-10-2018 IPR027383 Putative zinc-finger Amir_3145 8367f917c542ec6f8ce3ed997bf32c6c 240 Pfam PF03483 B3/4 domain 75 206 5.8E-16 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Amir_3145 8367f917c542ec6f8ce3ed997bf32c6c 240 SMART SM00873 73 228 3.4E-13 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Amir_3145 8367f917c542ec6f8ce3ed997bf32c6c 240 SUPERFAMILY SSF56037 65 229 1.62E-26 T 14-10-2018 Amir_1653 a967b9f2957067923ac79033b47aa8bb 437 Gene3D G3DSA:3.40.50.300 22 222 2.1E-22 T 14-10-2018 Amir_1653 a967b9f2957067923ac79033b47aa8bb 437 Gene3D G3DSA:3.30.420.280 223 418 1.2E-31 T 14-10-2018 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 Pfam PF00330 Aconitase family (aconitate hydratase) 7 458 1.5E-157 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 467 60.274 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 PRINTS PR00415 Aconitase family signature 344 355 4.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 PRINTS PR00415 Aconitase family signature 120 133 4.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 PRINTS PR00415 Aconitase family signature 83 96 4.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 PRINTS PR00415 Aconitase family signature 196 209 4.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 PRINTS PR00415 Aconitase family signature 134 149 4.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 PRINTS PR00415 Aconitase family signature 109 117 4.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 PRINTS PR00415 Aconitase family signature 287 301 4.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 PRINTS PR00415 Aconitase family signature 400 413 4.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 PRINTS PR00415 Aconitase family signature 210 223 4.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 ProSitePatterns PS00450 Aconitase family signature 1. 340 356 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 SUPERFAMILY SSF53732 1 468 7.72E-163 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 Gene3D G3DSA:3.30.499.20 4 287 2.1E-99 T 14-10-2018 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 460 5.0E-225 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 Gene3D G3DSA:3.30.499.10 329 470 1.9E-49 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Amir_6006 678d5943f2e763bcb1923d57abd1c85b 472 ProSitePatterns PS01244 Aconitase family signature 2. 400 413 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Amir_5172 1be9937d9a0c7e05155253fd4fa5bf65 1023 Pfam PF00672 HAMP domain 346 408 1.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5172 1be9937d9a0c7e05155253fd4fa5bf65 1023 Pfam PF08376 Nitrate and nitrite sensing 72 307 6.3E-34 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein Amir_5172 1be9937d9a0c7e05155253fd4fa5bf65 1023 SUPERFAMILY SSF55874 511 638 2.23E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5172 1be9937d9a0c7e05155253fd4fa5bf65 1023 Gene3D G3DSA:3.30.565.10 460 628 2.5E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5172 1be9937d9a0c7e05155253fd4fa5bf65 1023 SMART SM00387 524 640 2.9E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0736 4cf1c39a401d99df32b5a1137744ef9f 359 Gene3D G3DSA:3.10.20.30 48 357 1.4E-138 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Amir_0736 4cf1c39a401d99df32b5a1137744ef9f 359 SUPERFAMILY SSF81271 275 359 6.54E-35 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Amir_0736 4cf1c39a401d99df32b5a1137744ef9f 359 Pfam PF01926 50S ribosome-binding GTPase 5 125 1.8E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_0736 4cf1c39a401d99df32b5a1137744ef9f 359 Pfam PF06071 Protein of unknown function (DUF933) 275 358 4.5E-39 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Amir_0736 4cf1c39a401d99df32b5a1137744ef9f 359 Gene3D G3DSA:3.40.50.300 4 274 1.4E-138 T 14-10-2018 Amir_0736 4cf1c39a401d99df32b5a1137744ef9f 359 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 3 359 3.0E-129 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Amir_0736 4cf1c39a401d99df32b5a1137744ef9f 359 Gene3D G3DSA:1.10.150.300 113 198 1.4E-138 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Amir_0736 4cf1c39a401d99df32b5a1137744ef9f 359 PIRSF PIRSF006641 1 359 1.7E-138 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Amir_0736 4cf1c39a401d99df32b5a1137744ef9f 359 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 359 42.626 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Amir_0736 4cf1c39a401d99df32b5a1137744ef9f 359 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.0E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_0736 4cf1c39a401d99df32b5a1137744ef9f 359 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.0E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_0736 4cf1c39a401d99df32b5a1137744ef9f 359 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.0E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_0736 4cf1c39a401d99df32b5a1137744ef9f 359 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.0E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_0736 4cf1c39a401d99df32b5a1137744ef9f 359 SUPERFAMILY SSF52540 3 297 9.62E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2883 cad0efa2011b6d14675a081e2d7fae85 193 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 31 182 3.5E-13 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Amir_2883 cad0efa2011b6d14675a081e2d7fae85 193 SUPERFAMILY SSF48150 18 146 5.76E-13 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Amir_2883 cad0efa2011b6d14675a081e2d7fae85 193 TIGRFAM TIGR03252 TIGR03252: uncharacterized HhH-GPD family protein 8 193 1.0E-88 T 14-10-2018 IPR017658 Conserved hypothetical protein CHP03252, HhH-GPD Amir_6094 43af4029f4b2f38e732d05bd1d42b5c8 323 SUPERFAMILY SSF53822 35 315 2.98E-59 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_6094 43af4029f4b2f38e732d05bd1d42b5c8 323 Gene3D G3DSA:3.40.50.2300 139 309 3.9E-68 T 14-10-2018 Amir_6094 43af4029f4b2f38e732d05bd1d42b5c8 323 Gene3D G3DSA:3.40.50.2300 45 302 3.9E-68 T 14-10-2018 Amir_6094 43af4029f4b2f38e732d05bd1d42b5c8 323 Pfam PF13407 Periplasmic binding protein domain 39 294 2.7E-51 T 14-10-2018 IPR025997 Periplasmic binding protein Amir_6197 38dfc687cfeb718f79758a01f8d3549b 230 SMART SM00342 131 213 2.6E-5 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_6197 38dfc687cfeb718f79758a01f8d3549b 230 Gene3D G3DSA:1.10.10.60 119 217 1.0E-14 T 14-10-2018 Amir_6197 38dfc687cfeb718f79758a01f8d3549b 230 Pfam PF12833 Helix-turn-helix domain 138 213 1.3E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_0225 f5f2767cbcf2042c718a344fbb7f956a 188 Gene3D G3DSA:3.40.50.360 1 187 2.0E-39 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Amir_0225 f5f2767cbcf2042c718a344fbb7f956a 188 Pfam PF03358 NADPH-dependent FMN reductase 4 143 3.1E-22 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Amir_0225 f5f2767cbcf2042c718a344fbb7f956a 188 SUPERFAMILY SSF52218 4 176 4.72E-32 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Amir_4400 049d811178deaa2cda36bfc2c50aa638 303 SUPERFAMILY SSF46955 5 106 6.23E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_4400 049d811178deaa2cda36bfc2c50aa638 303 Pfam PF13411 MerR HTH family regulatory protein 6 72 5.4E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4400 049d811178deaa2cda36bfc2c50aa638 303 SMART SM00422 5 74 2.4E-23 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4400 049d811178deaa2cda36bfc2c50aa638 303 Gene3D G3DSA:1.10.1660.10 1 135 4.7E-26 T 14-10-2018 Amir_4400 049d811178deaa2cda36bfc2c50aa638 303 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 41 61 1.4E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4400 049d811178deaa2cda36bfc2c50aa638 303 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 1.4E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4400 049d811178deaa2cda36bfc2c50aa638 303 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 1.4E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_1358 7efa61aac936a25a3bd47815bf9534b1 345 Gene3D G3DSA:1.10.1610.10 9 333 2.1E-125 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Amir_1358 7efa61aac936a25a3bd47815bf9534b1 345 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 13 341 7.8E-128 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Amir_1358 7efa61aac936a25a3bd47815bf9534b1 345 SUPERFAMILY SSF52733 6 342 8.76E-113 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Amir_1358 7efa61aac936a25a3bd47815bf9534b1 345 Pfam PF02277 Phosphoribosyltransferase 9 341 7.4E-136 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Amir_1358 7efa61aac936a25a3bd47815bf9534b1 345 Gene3D G3DSA:3.40.50.10210 55 324 2.1E-125 T 14-10-2018 Amir_1358 7efa61aac936a25a3bd47815bf9534b1 345 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 10 343 36.562 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Amir_1359 ffa4de17f6fdf778942fe4a6f45d83b9 180 PIRSF PIRSF006135 3 176 6.0E-50 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Amir_1359 ffa4de17f6fdf778942fe4a6f45d83b9 180 Gene3D G3DSA:3.40.50.300 4 174 4.5E-47 T 14-10-2018 Amir_1359 ffa4de17f6fdf778942fe4a6f45d83b9 180 SUPERFAMILY SSF52540 5 173 2.5E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1359 ffa4de17f6fdf778942fe4a6f45d83b9 180 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 173 1.5E-51 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Amir_6226 72650f55c0f5fad929b4914c4c0413df 248 Gene3D G3DSA:3.90.226.10 1 191 8.2E-73 T 14-10-2018 Amir_6226 72650f55c0f5fad929b4914c4c0413df 248 SUPERFAMILY SSF52096 1 221 1.58E-64 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_6226 72650f55c0f5fad929b4914c4c0413df 248 Pfam PF00378 Enoyl-CoA hydratase/isomerase 5 238 2.4E-43 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Amir_6226 72650f55c0f5fad929b4914c4c0413df 248 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 90 110 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Amir_2874 31de0d83c6d08ee079ee047ee45e71d3 360 SUPERFAMILY SSF81345 22 351 8.89E-81 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_2874 31de0d83c6d08ee079ee047ee45e71d3 360 Gene3D G3DSA:1.10.3470.10 22 358 1.2E-100 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_2874 31de0d83c6d08ee079ee047ee45e71d3 360 Pfam PF01032 FecCD transport family 35 351 1.0E-90 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_2609 0ffa36ca8d9305830bfae1f9f6604293 204 Gene3D G3DSA:1.10.357.10 13 202 4.9E-41 T 14-10-2018 Amir_2609 0ffa36ca8d9305830bfae1f9f6604293 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 70 4.8E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2609 0ffa36ca8d9305830bfae1f9f6604293 204 SUPERFAMILY SSF46689 17 88 3.99E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_1200 e66e8102ad6a33dbbc3da30a98cb1b77 243 SUPERFAMILY SSF52266 1 230 7.5E-14 T 14-10-2018 Amir_1200 e66e8102ad6a33dbbc3da30a98cb1b77 243 Gene3D G3DSA:3.40.50.1110 2 233 4.6E-9 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_1200 e66e8102ad6a33dbbc3da30a98cb1b77 243 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 5 215 9.4E-9 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_1213 a98ce042e6ae74215c003584a1392d26 553 Gene3D G3DSA:3.40.50.11290 244 341 2.5E-41 T 14-10-2018 Amir_1213 a98ce042e6ae74215c003584a1392d26 553 Gene3D G3DSA:3.30.1490.270 378 438 7.6E-24 T 14-10-2018 Amir_1213 a98ce042e6ae74215c003584a1392d26 553 Pfam PF14403 Circularly permuted ATP-grasp type 2 106 482 2.3E-160 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 Amir_1213 a98ce042e6ae74215c003584a1392d26 553 SUPERFAMILY SSF56059 54 497 5.69E-58 T 14-10-2018 Amir_1213 a98ce042e6ae74215c003584a1392d26 553 PIRSF PIRSF005522 32 509 1.9E-212 T 14-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 Amir_3665 df479c2088b0c7fe6dad5d302ce9a770 322 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 91 245 1.2E-47 T 14-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 Amir_3665 df479c2088b0c7fe6dad5d302ce9a770 322 Gene3D G3DSA:2.60.120.330 67 256 1.2E-63 T 14-10-2018 IPR027443 Isopenicillin N synthase-like Amir_3665 df479c2088b0c7fe6dad5d302ce9a770 322 SUPERFAMILY SSF51197 124 246 1.7E-20 T 14-10-2018 Amir_6740 c7004df48b9b99cf617915bedc3c9e50 345 Gene3D G3DSA:3.40.50.720 1 319 4.6E-42 T 14-10-2018 Amir_6740 c7004df48b9b99cf617915bedc3c9e50 345 SUPERFAMILY SSF51735 1 317 2.36E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6740 c7004df48b9b99cf617915bedc3c9e50 345 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 235 4.2E-20 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_0265 725b3e267dbf0e1de7fc2e423753d84e 373 Gene3D G3DSA:3.40.640.10 30 281 1.0E-135 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_0265 725b3e267dbf0e1de7fc2e423753d84e 373 PIRSF PIRSF038800 1 373 1.3E-128 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 Amir_0265 725b3e267dbf0e1de7fc2e423753d84e 373 Gene3D G3DSA:3.90.1150.10 2 373 1.0E-135 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_0265 725b3e267dbf0e1de7fc2e423753d84e 373 TIGRFAM TIGR01814 kynureninase: kynureninase 2 372 5.0E-77 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 Amir_0265 725b3e267dbf0e1de7fc2e423753d84e 373 Hamap MF_01970 Kynureninase [kynU]. 2 373 32.59 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 Amir_0265 725b3e267dbf0e1de7fc2e423753d84e 373 SUPERFAMILY SSF53383 3 373 5.48E-84 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_0265 725b3e267dbf0e1de7fc2e423753d84e 373 Pfam PF00266 Aminotransferase class-V 139 320 6.4E-19 T 14-10-2018 IPR000192 Aminotransferase class V domain Amir_0259 5b32accd645752aaacdb09bd6d4438de 308 Pfam PF00561 alpha/beta hydrolase fold 37 290 9.0E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_0259 5b32accd645752aaacdb09bd6d4438de 308 PRINTS PR00412 Epoxide hydrolase signature 107 120 5.2E-23 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_0259 5b32accd645752aaacdb09bd6d4438de 308 PRINTS PR00412 Epoxide hydrolase signature 63 78 5.2E-23 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_0259 5b32accd645752aaacdb09bd6d4438de 308 PRINTS PR00412 Epoxide hydrolase signature 282 304 5.2E-23 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_0259 5b32accd645752aaacdb09bd6d4438de 308 PRINTS PR00412 Epoxide hydrolase signature 43 61 5.2E-23 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_0259 5b32accd645752aaacdb09bd6d4438de 308 Gene3D G3DSA:3.40.50.1820 16 306 1.5E-70 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0259 5b32accd645752aaacdb09bd6d4438de 308 SUPERFAMILY SSF53474 11 307 3.98E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5764 3bc9b85fd997d314e9326e6a5e09b1b0 487 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 37 388 8.6E-107 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_5764 3bc9b85fd997d314e9326e6a5e09b1b0 487 Pfam PF01098 Cell cycle protein 37 389 8.7E-106 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_5764 3bc9b85fd997d314e9326e6a5e09b1b0 487 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 347 371 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_6371 e697f7818a77e8b82023acf81158067d 127 SUPERFAMILY SSF46785 5 78 3.99E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6371 e697f7818a77e8b82023acf81158067d 127 Gene3D G3DSA:1.10.10.10 10 124 1.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6371 e697f7818a77e8b82023acf81158067d 127 SMART SM00345 17 76 4.2E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_6371 e697f7818a77e8b82023acf81158067d 127 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.1E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_3979 3354a6e9bffe3a35cb4d36278e3bb744 203 Gene3D G3DSA:1.10.357.10 18 201 3.5E-58 T 14-10-2018 Amir_3979 3354a6e9bffe3a35cb4d36278e3bb744 203 SUPERFAMILY SSF48498 102 193 7.74E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3979 3354a6e9bffe3a35cb4d36278e3bb744 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 51 74 4.7E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3979 3354a6e9bffe3a35cb4d36278e3bb744 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 43 4.7E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3979 3354a6e9bffe3a35cb4d36278e3bb744 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 76 2.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3979 3354a6e9bffe3a35cb4d36278e3bb744 203 SUPERFAMILY SSF46689 19 99 1.08E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5800 75ca6a589f832b6f6d561e969ccb8080 469 SUPERFAMILY SSF102114 158 390 2.35E-44 T 14-10-2018 Amir_5800 75ca6a589f832b6f6d561e969ccb8080 469 Pfam PF00919 Uncharacterized protein family UPF0004 9 101 4.6E-27 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Amir_5800 75ca6a589f832b6f6d561e969ccb8080 469 Pfam PF04055 Radical SAM superfamily 173 344 1.2E-21 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_5800 75ca6a589f832b6f6d561e969ccb8080 469 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 9 460 8.6E-119 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Amir_5800 75ca6a589f832b6f6d561e969ccb8080 469 SMART SM00729 167 386 7.2E-38 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amir_5800 75ca6a589f832b6f6d561e969ccb8080 469 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 459 2.4E-99 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Amir_5800 75ca6a589f832b6f6d561e969ccb8080 469 Gene3D G3DSA:3.80.30.20 164 400 9.5E-64 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amir_5800 75ca6a589f832b6f6d561e969ccb8080 469 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 463 56.456 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Amir_5800 75ca6a589f832b6f6d561e969ccb8080 469 Gene3D G3DSA:2.40.50.140 401 466 1.5E-8 T 14-10-2018 Amir_5800 75ca6a589f832b6f6d561e969ccb8080 469 Gene3D G3DSA:3.40.50.12160 8 132 4.9E-31 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Amir_5800 75ca6a589f832b6f6d561e969ccb8080 469 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 171 191 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Amir_6126 24f15c5f1fa7664619ee206606e7fd78 196 SUPERFAMILY SSF55729 38 196 3.32E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_6126 24f15c5f1fa7664619ee206606e7fd78 196 Gene3D G3DSA:3.40.630.30 31 196 1.0E-47 T 14-10-2018 Amir_6126 24f15c5f1fa7664619ee206606e7fd78 196 Pfam PF00583 Acetyltransferase (GNAT) family 83 169 8.1E-11 T 14-10-2018 IPR000182 GNAT domain Amir_1744 57703c4491167169e1e984fd411bb8ae 176 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 95 1.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1744 57703c4491167169e1e984fd411bb8ae 176 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1744 57703c4491167169e1e984fd411bb8ae 176 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 105 124 1.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1744 57703c4491167169e1e984fd411bb8ae 176 SUPERFAMILY SSF51735 6 175 9.75E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1744 57703c4491167169e1e984fd411bb8ae 176 Gene3D G3DSA:3.40.50.720 5 69 5.1E-12 T 14-10-2018 Amir_1744 57703c4491167169e1e984fd411bb8ae 176 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 128 174 6.1E-10 T 14-10-2018 Amir_1744 57703c4491167169e1e984fd411bb8ae 176 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 69 1.1E-6 T 14-10-2018 Amir_1744 57703c4491167169e1e984fd411bb8ae 176 Pfam PF00106 short chain dehydrogenase 75 121 4.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1744 57703c4491167169e1e984fd411bb8ae 176 Gene3D G3DSA:3.40.50.720 70 175 4.3E-25 T 14-10-2018 Amir_1744 57703c4491167169e1e984fd411bb8ae 176 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 92 120 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_6797 55dd65be92e1a174f0b429ac9d928d7a 70 Pfam PF00403 Heavy-metal-associated domain 7 67 1.3E-14 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Amir_6797 55dd65be92e1a174f0b429ac9d928d7a 70 PRINTS PR00944 Copper ion binding protein signature 5 17 1.3E-6 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Amir_6797 55dd65be92e1a174f0b429ac9d928d7a 70 PRINTS PR00944 Copper ion binding protein signature 30 43 1.3E-6 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Amir_6797 55dd65be92e1a174f0b429ac9d928d7a 70 PRINTS PR00944 Copper ion binding protein signature 17 30 1.3E-6 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Amir_6797 55dd65be92e1a174f0b429ac9d928d7a 70 PRINTS PR00944 Copper ion binding protein signature 55 68 1.3E-6 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Amir_6797 55dd65be92e1a174f0b429ac9d928d7a 70 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 39 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Amir_6797 55dd65be92e1a174f0b429ac9d928d7a 70 Gene3D G3DSA:3.30.70.100 5 69 1.3E-19 T 14-10-2018 Amir_6797 55dd65be92e1a174f0b429ac9d928d7a 70 SUPERFAMILY SSF55008 3 69 6.54E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Amir_1927 39aeb8e41fe2c6744d47364204421af8 439 Gene3D G3DSA:3.40.190.10 147 419 2.6E-107 T 14-10-2018 Amir_1927 39aeb8e41fe2c6744d47364204421af8 439 Pfam PF01547 Bacterial extracellular solute-binding protein 49 334 4.4E-27 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_1927 39aeb8e41fe2c6744d47364204421af8 439 Gene3D G3DSA:3.40.190.10 53 359 2.6E-107 T 14-10-2018 Amir_1927 39aeb8e41fe2c6744d47364204421af8 439 SUPERFAMILY SSF53850 23 424 1.25E-59 T 14-10-2018 Amir_0931 83e77935fd76019b8a9fbc99bdc60ff2 297 SUPERFAMILY SSF53335 26 224 2.97E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_0931 83e77935fd76019b8a9fbc99bdc60ff2 297 Gene3D G3DSA:3.40.50.150 8 270 2.2E-25 T 14-10-2018 Amir_0931 83e77935fd76019b8a9fbc99bdc60ff2 297 Pfam PF08241 Methyltransferase domain 47 158 1.7E-9 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_6854 b538daae4545170bd53f2511b183e242 330 SUPERFAMILY SSF53822 63 329 1.35E-65 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_6854 b538daae4545170bd53f2511b183e242 330 Pfam PF13377 Periplasmic binding protein-like domain 169 326 3.8E-37 T 14-10-2018 Amir_6854 b538daae4545170bd53f2511b183e242 330 Gene3D G3DSA:3.40.50.2300 161 323 2.1E-68 T 14-10-2018 Amir_6854 b538daae4545170bd53f2511b183e242 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 49 1.6E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_6854 b538daae4545170bd53f2511b183e242 330 SMART SM00354 3 73 2.4E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_6854 b538daae4545170bd53f2511b183e242 330 Gene3D G3DSA:3.40.50.2300 64 318 2.1E-68 T 14-10-2018 Amir_6854 b538daae4545170bd53f2511b183e242 330 SUPERFAMILY SSF47413 3 61 1.32E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_6854 b538daae4545170bd53f2511b183e242 330 Gene3D G3DSA:1.10.260.40 1 60 2.6E-19 T 14-10-2018 Amir_3123 12f6ff103e1731f092f8d610433dbd15 1392 SUPERFAMILY SSF50494 19 201 1.02E-16 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_3123 12f6ff103e1731f092f8d610433dbd15 1392 SUPERFAMILY SSF50969 903 1196 1.1E-5 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Amir_3123 12f6ff103e1731f092f8d610433dbd15 1392 Gene3D G3DSA:2.120.10.30 707 965 1.1E-6 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_3123 12f6ff103e1731f092f8d610433dbd15 1392 Gene3D G3DSA:2.130.10.10 1106 1345 2.9E-11 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_3123 12f6ff103e1731f092f8d610433dbd15 1392 Gene3D G3DSA:2.40.10.120 20 204 2.5E-9 T 14-10-2018 Amir_3123 12f6ff103e1731f092f8d610433dbd15 1392 SUPERFAMILY SSF69322 743 1307 1.27E-19 T 14-10-2018 Amir_3123 12f6ff103e1731f092f8d610433dbd15 1392 SUPERFAMILY SSF52540 226 465 4.4E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3123 12f6ff103e1731f092f8d610433dbd15 1392 Pfam PF13365 Trypsin-like peptidase domain 31 177 7.1E-15 T 14-10-2018 Amir_4673 ade3b4a9a83d0d8982220075944fc966 331 Gene3D G3DSA:2.60.120.260 26 140 1.4E-13 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_4673 ade3b4a9a83d0d8982220075944fc966 331 Gene3D G3DSA:3.40.50.1110 144 330 4.3E-39 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_4673 ade3b4a9a83d0d8982220075944fc966 331 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 150 317 4.7E-20 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_4673 ade3b4a9a83d0d8982220075944fc966 331 SUPERFAMILY SSF52266 144 328 2.6E-23 T 14-10-2018 Amir_5670 59a2da769524c74ee3fce9409ffa6123 335 Pfam PF12833 Helix-turn-helix domain 251 328 2.3E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_5670 59a2da769524c74ee3fce9409ffa6123 335 Gene3D G3DSA:1.10.10.60 236 332 1.1E-20 T 14-10-2018 Amir_5670 59a2da769524c74ee3fce9409ffa6123 335 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 205 7.4E-46 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal Amir_5670 59a2da769524c74ee3fce9409ffa6123 335 SMART SM00342 245 327 7.2E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_5670 59a2da769524c74ee3fce9409ffa6123 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 296 311 6.6E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amir_5670 59a2da769524c74ee3fce9409ffa6123 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 311 327 6.6E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amir_5670 59a2da769524c74ee3fce9409ffa6123 335 SUPERFAMILY SSF46689 284 329 1.65E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_6598 3698fb2d3273da90c179e1b9b7dd1e2d 132 Gene3D G3DSA:3.30.420.100 17 132 2.2E-40 T 14-10-2018 Amir_6598 3698fb2d3273da90c179e1b9b7dd1e2d 132 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 18 132 1.8E-47 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6598 3698fb2d3273da90c179e1b9b7dd1e2d 132 SUPERFAMILY SSF53137 19 130 1.92E-46 T 14-10-2018 Amir_6598 3698fb2d3273da90c179e1b9b7dd1e2d 132 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 21 132 4.5E-39 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6598 3698fb2d3273da90c179e1b9b7dd1e2d 132 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 18 132 27.097 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_4995 1889297b2f744a053c68a04ec64936f6 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 2.8E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4995 1889297b2f744a053c68a04ec64936f6 218 SUPERFAMILY SSF52172 1 129 2.13E-34 T 14-10-2018 IPR011006 CheY-like superfamily Amir_4995 1889297b2f744a053c68a04ec64936f6 218 SUPERFAMILY SSF46894 144 215 4.76E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4995 1889297b2f744a053c68a04ec64936f6 218 SMART SM00421 151 208 2.1E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4995 1889297b2f744a053c68a04ec64936f6 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4995 1889297b2f744a053c68a04ec64936f6 218 Pfam PF00072 Response regulator receiver domain 4 115 1.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4995 1889297b2f744a053c68a04ec64936f6 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 5.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4995 1889297b2f744a053c68a04ec64936f6 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 5.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4995 1889297b2f744a053c68a04ec64936f6 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 5.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4995 1889297b2f744a053c68a04ec64936f6 218 Gene3D G3DSA:3.40.50.12740 2 214 3.9E-62 T 14-10-2018 Amir_4995 1889297b2f744a053c68a04ec64936f6 218 SMART SM00448 2 115 3.2E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1354 dd6b0d3f960587a0133e16fe736077ae 499 Gene3D G3DSA:3.40.630.10 161 496 1.9E-132 T 14-10-2018 Amir_1354 dd6b0d3f960587a0133e16fe736077ae 499 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 5 495 34.781 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 Amir_1354 dd6b0d3f960587a0133e16fe736077ae 499 SUPERFAMILY SSF53187 175 492 5.02E-111 T 14-10-2018 Amir_1354 dd6b0d3f960587a0133e16fe736077ae 499 Gene3D G3DSA:3.40.220.10 5 154 1.8E-25 T 14-10-2018 Amir_1354 dd6b0d3f960587a0133e16fe736077ae 499 PRINTS PR00481 Cytosol aminopeptidase signature 315 336 4.5E-49 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Amir_1354 dd6b0d3f960587a0133e16fe736077ae 499 PRINTS PR00481 Cytosol aminopeptidase signature 278 299 4.5E-49 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Amir_1354 dd6b0d3f960587a0133e16fe736077ae 499 PRINTS PR00481 Cytosol aminopeptidase signature 256 273 4.5E-49 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Amir_1354 dd6b0d3f960587a0133e16fe736077ae 499 PRINTS PR00481 Cytosol aminopeptidase signature 365 380 4.5E-49 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Amir_1354 dd6b0d3f960587a0133e16fe736077ae 499 PRINTS PR00481 Cytosol aminopeptidase signature 337 357 4.5E-49 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Amir_1354 dd6b0d3f960587a0133e16fe736077ae 499 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 341 348 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Amir_1354 dd6b0d3f960587a0133e16fe736077ae 499 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 182 486 2.6E-119 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Amir_1354 dd6b0d3f960587a0133e16fe736077ae 499 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 22 144 3.9E-21 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Amir_1354 dd6b0d3f960587a0133e16fe736077ae 499 SUPERFAMILY SSF52949 18 162 3.94E-27 T 14-10-2018 Amir_5508 c9282a8c8c2ba4b4a503bd5955b3c9be 218 Pfam PF08808 RES domain 32 195 1.2E-21 T 14-10-2018 IPR014914 RES domain Amir_5508 c9282a8c8c2ba4b4a503bd5955b3c9be 218 SMART SM00953 60 190 2.1E-8 T 14-10-2018 IPR014914 RES domain Amir_4477 df8984cc56c8a2a67edc0bf8934d06b7 581 SMART SM00220 15 275 1.4E-49 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_4477 df8984cc56c8a2a67edc0bf8934d06b7 581 Gene3D G3DSA:1.10.510.10 107 282 5.9E-36 T 14-10-2018 Amir_4477 df8984cc56c8a2a67edc0bf8934d06b7 581 SUPERFAMILY SSF56112 12 276 5.26E-62 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_4477 df8984cc56c8a2a67edc0bf8934d06b7 581 Gene3D G3DSA:3.30.200.20 1 106 8.5E-26 T 14-10-2018 Amir_4477 df8984cc56c8a2a67edc0bf8934d06b7 581 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 21 44 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_4477 df8984cc56c8a2a67edc0bf8934d06b7 581 Pfam PF00069 Protein kinase domain 15 231 9.8E-44 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_4477 df8984cc56c8a2a67edc0bf8934d06b7 581 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 143 155 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_4092 8497e9a79cd0c99211fe8c9c40a94ec8 410 Pfam PF06441 Epoxide hydrolase N terminus 25 129 2.4E-35 T 14-10-2018 IPR010497 Epoxide hydrolase, N-terminal Reactome: R-HSA-211945 Amir_4092 8497e9a79cd0c99211fe8c9c40a94ec8 410 PRINTS PR00412 Epoxide hydrolase signature 149 164 3.8E-13 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4092 8497e9a79cd0c99211fe8c9c40a94ec8 410 PRINTS PR00412 Epoxide hydrolase signature 381 403 3.8E-13 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4092 8497e9a79cd0c99211fe8c9c40a94ec8 410 PRINTS PR00412 Epoxide hydrolase signature 194 207 3.8E-13 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4092 8497e9a79cd0c99211fe8c9c40a94ec8 410 PRINTS PR00412 Epoxide hydrolase signature 208 221 3.8E-13 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4092 8497e9a79cd0c99211fe8c9c40a94ec8 410 PRINTS PR00412 Epoxide hydrolase signature 120 138 3.8E-13 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4092 8497e9a79cd0c99211fe8c9c40a94ec8 410 Gene3D G3DSA:3.40.50.1820 24 409 7.1E-135 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4092 8497e9a79cd0c99211fe8c9c40a94ec8 410 SUPERFAMILY SSF53474 22 403 7.39E-92 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4092 8497e9a79cd0c99211fe8c9c40a94ec8 410 PIRSF PIRSF001112 1 410 1.5E-112 T 14-10-2018 IPR016292 Epoxide hydrolase GO:0033961 Reactome: R-HSA-211945 Amir_2075 c4b114e4abbe58b35394afce8ccbf5ba 471 Gene3D G3DSA:1.20.1740.10 25 460 9.8E-55 T 14-10-2018 Amir_2075 c4b114e4abbe58b35394afce8ccbf5ba 471 Pfam PF13520 Amino acid permease 34 429 8.9E-40 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amir_2075 c4b114e4abbe58b35394afce8ccbf5ba 471 PIRSF PIRSF006060 9 469 1.2E-66 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amir_2075 c4b114e4abbe58b35394afce8ccbf5ba 471 TIGRFAM TIGR00908 2A0305: ethanolamine permease 17 459 1.4E-162 T 14-10-2018 IPR004757 Ethanolamine permease Amir_4145 d97699eede680887f0620913e4e0e5a7 475 Pfam PF13354 Beta-lactamase enzyme family 185 423 2.0E-7 T 14-10-2018 Amir_4145 d97699eede680887f0620913e4e0e5a7 475 SUPERFAMILY SSF56601 184 442 7.51E-15 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_7024 76cff2dd28bf76ec840b1e4a0d30e209 434 Gene3D G3DSA:2.30.40.10 10 425 4.8E-119 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_7024 76cff2dd28bf76ec840b1e4a0d30e209 434 SUPERFAMILY SSF51338 354 433 1.9E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_7024 76cff2dd28bf76ec840b1e4a0d30e209 434 Gene3D G3DSA:3.20.20.140 59 348 4.8E-119 T 14-10-2018 Amir_7024 76cff2dd28bf76ec840b1e4a0d30e209 434 SUPERFAMILY SSF51338 9 77 3.02E-7 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_7024 76cff2dd28bf76ec840b1e4a0d30e209 434 Pfam PF01979 Amidohydrolase family 55 408 3.2E-58 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_7024 76cff2dd28bf76ec840b1e4a0d30e209 434 SUPERFAMILY SSF51556 58 354 1.45E-83 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_3229 f32cb6714145d22c72c8fbf4845c6261 183 PIRSF PIRSF001296 7 183 1.9E-43 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Amir_3229 f32cb6714145d22c72c8fbf4845c6261 183 Pfam PF02669 K+-transporting ATPase, c chain 13 180 2.6E-47 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Amir_4624 8bc361929c17a1b5270f7d4fce11a821 333 SUPERFAMILY SSF48371 115 324 3.55E-21 T 14-10-2018 IPR016024 Armadillo-type fold Amir_4624 8bc361929c17a1b5270f7d4fce11a821 333 SUPERFAMILY SSF46955 3 100 1.79E-22 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_4624 8bc361929c17a1b5270f7d4fce11a821 333 Gene3D G3DSA:1.10.1660.10 2 105 3.1E-23 T 14-10-2018 Amir_4624 8bc361929c17a1b5270f7d4fce11a821 333 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.6E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4624 8bc361929c17a1b5270f7d4fce11a821 333 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.6E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4624 8bc361929c17a1b5270f7d4fce11a821 333 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.6E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4624 8bc361929c17a1b5270f7d4fce11a821 333 SMART SM00567 E-Z type HEAT repeats 189 219 0.011 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Amir_4624 8bc361929c17a1b5270f7d4fce11a821 333 SMART SM00567 E-Z type HEAT repeats 286 315 68.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Amir_4624 8bc361929c17a1b5270f7d4fce11a821 333 SMART SM00567 E-Z type HEAT repeats 221 250 750.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Amir_4624 8bc361929c17a1b5270f7d4fce11a821 333 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4624 8bc361929c17a1b5270f7d4fce11a821 333 Gene3D G3DSA:1.25.10.110 108 204 4.3E-5 T 14-10-2018 Amir_4624 8bc361929c17a1b5270f7d4fce11a821 333 SMART SM00422 1 70 1.3E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4624 8bc361929c17a1b5270f7d4fce11a821 333 Pfam PF13411 MerR HTH family regulatory protein 3 68 8.4E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4624 8bc361929c17a1b5270f7d4fce11a821 333 Gene3D G3DSA:1.25.10.10 205 333 1.5E-9 T 14-10-2018 IPR011989 Armadillo-like helical Amir_4624 8bc361929c17a1b5270f7d4fce11a821 333 Pfam PF13646 HEAT repeats 178 263 5.0E-13 T 14-10-2018 Amir_2678 4cb747f04c7223dcf7fb52ac56eb1ccb 274 SUPERFAMILY SSF53474 32 270 7.13E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2678 4cb747f04c7223dcf7fb52ac56eb1ccb 274 SMART SM00824 Thioesterase 50 270 0.0052 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 Amir_2678 4cb747f04c7223dcf7fb52ac56eb1ccb 274 Pfam PF00975 Thioesterase domain 48 260 1.0E-53 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 Amir_2678 4cb747f04c7223dcf7fb52ac56eb1ccb 274 Gene3D G3DSA:3.40.50.1820 30 271 1.7E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3744 54dfc671a3b5ca25dd8a1eeb2b4b6e23 288 Pfam PF14361 RsbT co-antagonist protein rsbRD N-terminal domain 15 110 1.9E-24 T 14-10-2018 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain Amir_3744 54dfc671a3b5ca25dd8a1eeb2b4b6e23 288 SUPERFAMILY SSF52091 163 273 4.91E-18 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3744 54dfc671a3b5ca25dd8a1eeb2b4b6e23 288 Gene3D G3DSA:3.30.750.24 160 280 1.4E-36 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3744 54dfc671a3b5ca25dd8a1eeb2b4b6e23 288 Pfam PF01740 STAS domain 166 269 2.1E-10 T 14-10-2018 IPR002645 STAS domain Amir_6894 7fac5c9ff0c4acda2de7477cad83aea9 339 Gene3D G3DSA:3.90.1150.10 254 339 9.0E-15 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_6894 7fac5c9ff0c4acda2de7477cad83aea9 339 PIRSF PIRSF017617 1 339 2.1E-103 T 14-10-2018 IPR023603 Threonine aldolase Amir_6894 7fac5c9ff0c4acda2de7477cad83aea9 339 Gene3D G3DSA:3.40.640.10 7 250 1.9E-73 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_6894 7fac5c9ff0c4acda2de7477cad83aea9 339 SUPERFAMILY SSF53383 7 335 4.54E-89 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_6894 7fac5c9ff0c4acda2de7477cad83aea9 339 Pfam PF01212 Beta-eliminating lyase 8 291 5.7E-72 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 Amir_5684 0033c6fbe37701952f6d727c2d0075db 642 Gene3D G3DSA:1.10.1740.10 3 91 9.9E-19 T 14-10-2018 Amir_5684 0033c6fbe37701952f6d727c2d0075db 642 Pfam PF11790 Glycosyl hydrolase catalytic core 423 638 3.5E-51 T 14-10-2018 IPR024655 Uncharacterised protein family, glycosyl hydrolase catalytic domain Amir_5684 0033c6fbe37701952f6d727c2d0075db 642 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 181 8.6E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_5684 0033c6fbe37701952f6d727c2d0075db 642 Gene3D G3DSA:3.20.20.80 471 642 2.0E-15 T 14-10-2018 Amir_5684 0033c6fbe37701952f6d727c2d0075db 642 SUPERFAMILY SSF51445 418 639 3.03E-24 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_5684 0033c6fbe37701952f6d727c2d0075db 642 Pfam PF04542 Sigma-70 region 2 26 91 7.3E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5684 0033c6fbe37701952f6d727c2d0075db 642 SUPERFAMILY SSF88946 10 97 5.18E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_3961 4f70573efe3e74b677209f13f29e8f42 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 9.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3961 4f70573efe3e74b677209f13f29e8f42 288 Gene3D G3DSA:1.10.10.10 6 88 1.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3961 4f70573efe3e74b677209f13f29e8f42 288 SUPERFAMILY SSF46785 8 87 8.39E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6307 801478b6acdb6ca9305aee2c87ac8ce8 206 Gene3D G3DSA:3.40.50.2020 65 202 6.8E-11 T 14-10-2018 Amir_6307 801478b6acdb6ca9305aee2c87ac8ce8 206 SUPERFAMILY SSF53271 44 196 1.3E-15 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Amir_6614 584247296cebc9e55472fb5f22d48567 216 Pfam PF00297 Ribosomal protein L3 99 187 1.4E-17 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6614 584247296cebc9e55472fb5f22d48567 216 SUPERFAMILY SSF50447 5 213 1.06E-81 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amir_6614 584247296cebc9e55472fb5f22d48567 216 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 8 209 1.2E-90 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6614 584247296cebc9e55472fb5f22d48567 216 Gene3D G3DSA:2.40.50.620 37 101 5.6E-18 T 14-10-2018 Amir_6614 584247296cebc9e55472fb5f22d48567 216 ProSitePatterns PS00474 Ribosomal protein L3 signature. 106 129 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site Amir_6614 584247296cebc9e55472fb5f22d48567 216 Gene3D G3DSA:2.40.30.10 124 215 1.5E-17 T 14-10-2018 Amir_6614 584247296cebc9e55472fb5f22d48567 216 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 6 212 40.389 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6804 6556d4e59ef698bef82f6b0bb04b7959 1614 Pfam PF12458 ATPase involved in DNA repair 24 482 2.3E-188 T 14-10-2018 IPR020958 Domain of unknown function DUF3686 Amir_6804 6556d4e59ef698bef82f6b0bb04b7959 1614 Pfam PF07728 AAA domain (dynein-related subfamily) 1255 1381 9.8E-5 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Amir_6804 6556d4e59ef698bef82f6b0bb04b7959 1614 Gene3D G3DSA:3.40.50.300 1246 1405 1.1E-12 T 14-10-2018 Amir_6804 6556d4e59ef698bef82f6b0bb04b7959 1614 SUPERFAMILY SSF52540 1250 1400 7.54E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4260 bce1412a08ebecc5beb12980ceff2cc3 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 9.5E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4260 bce1412a08ebecc5beb12980ceff2cc3 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 1.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4260 bce1412a08ebecc5beb12980ceff2cc3 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 1.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4260 bce1412a08ebecc5beb12980ceff2cc3 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 1.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4260 bce1412a08ebecc5beb12980ceff2cc3 217 SUPERFAMILY SSF52172 3 134 2.7E-32 T 14-10-2018 IPR011006 CheY-like superfamily Amir_4260 bce1412a08ebecc5beb12980ceff2cc3 217 SMART SM00421 152 209 6.4E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4260 bce1412a08ebecc5beb12980ceff2cc3 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4260 bce1412a08ebecc5beb12980ceff2cc3 217 SUPERFAMILY SSF46894 136 214 3.4E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4260 bce1412a08ebecc5beb12980ceff2cc3 217 Pfam PF00072 Response regulator receiver domain 4 117 5.4E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4260 bce1412a08ebecc5beb12980ceff2cc3 217 Gene3D G3DSA:3.40.50.12740 2 215 1.9E-66 T 14-10-2018 Amir_4260 bce1412a08ebecc5beb12980ceff2cc3 217 SMART SM00448 2 116 1.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 Pfam PF03527 RHS protein 1272 1302 1.2E-6 T 14-10-2018 IPR001826 RHS protein Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 574 602 0.0021 T 14-10-2018 IPR006530 YD repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 825 865 4.4E-5 T 14-10-2018 IPR006530 YD repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 553 588 5.0E-5 T 14-10-2018 IPR006530 YD repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 909 946 6.3E-4 T 14-10-2018 IPR006530 YD repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 720 760 7.9E-11 T 14-10-2018 IPR006530 YD repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 971 1009 1.8E-5 T 14-10-2018 IPR006530 YD repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 678 716 5.5E-4 T 14-10-2018 IPR006530 YD repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 763 803 9.8E-10 T 14-10-2018 IPR006530 YD repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 867 908 4.7E-6 T 14-10-2018 IPR006530 YD repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 637 677 3.3E-5 T 14-10-2018 IPR006530 YD repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 657 694 2.5E-7 T 14-10-2018 IPR006530 YD repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1179 1214 8.0E-7 T 14-10-2018 IPR006530 YD repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 Gene3D G3DSA:2.180.10.10 1103 1368 6.5E-36 T 14-10-2018 Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 Gene3D G3DSA:3.90.930.1 816 946 4.6E-8 T 14-10-2018 Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 Gene3D G3DSA:3.90.930.1 612 730 2.0E-7 T 14-10-2018 Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 Pfam PF15657 HNH/Endo VII superfamily nuclease toxins 1410 1477 7.9E-15 T 14-10-2018 IPR028048 HNH/Endo VII superfamily nuclease toxins Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 SUPERFAMILY SSF69304 555 766 7.98E-5 T 14-10-2018 Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1295 1368 5.7E-22 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 Pfam PF05593 RHS Repeat 1179 1208 5.5E-7 T 14-10-2018 IPR031325 RHS repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 Pfam PF05593 RHS Repeat 574 608 5.8E-5 T 14-10-2018 IPR031325 RHS repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 Pfam PF05593 RHS Repeat 971 1005 1.1E-5 T 14-10-2018 IPR031325 RHS repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 Pfam PF05593 RHS Repeat 867 904 2.0E-5 T 14-10-2018 IPR031325 RHS repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 Pfam PF05593 RHS Repeat 662 694 2.0E-8 T 14-10-2018 IPR031325 RHS repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 Pfam PF05593 RHS Repeat 720 756 9.3E-10 T 14-10-2018 IPR031325 RHS repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 Pfam PF05593 RHS Repeat 763 798 5.2E-9 T 14-10-2018 IPR031325 RHS repeat Amir_4544 8773b874fdb7cf552ad464da26a9a641 1488 Pfam PF05593 RHS Repeat 889 925 3.0E-6 T 14-10-2018 IPR031325 RHS repeat Amir_0322 8d4d2b9e66c77046eec793ef5392562d 305 SUPERFAMILY SSF53335 7 287 5.37E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_0322 8d4d2b9e66c77046eec793ef5392562d 305 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 165 230 2.3E-7 T 14-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 Amir_0322 8d4d2b9e66c77046eec793ef5392562d 305 Gene3D G3DSA:3.40.50.12710 3 156 2.5E-15 T 14-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 Amir_5096 2a1a93b18298fdd011a8a80a45421fab 126 SUPERFAMILY SSF55961 6 105 8.38E-8 T 14-10-2018 Amir_5096 2a1a93b18298fdd011a8a80a45421fab 126 Gene3D G3DSA:3.30.530.20 1 125 1.1E-7 T 14-10-2018 IPR023393 START-like domain superfamily Amir_4683 cb34f19326b2fe3e4f8a964dd66166e8 385 Gene3D G3DSA:1.10.10.60 192 251 9.7E-15 T 14-10-2018 Amir_4683 cb34f19326b2fe3e4f8a964dd66166e8 385 Pfam PF00440 Bacterial regulatory proteins, tetR family 210 256 4.8E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4683 cb34f19326b2fe3e4f8a964dd66166e8 385 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 4.2E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4683 cb34f19326b2fe3e4f8a964dd66166e8 385 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 3.6E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4683 cb34f19326b2fe3e4f8a964dd66166e8 385 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 3.6E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4683 cb34f19326b2fe3e4f8a964dd66166e8 385 SUPERFAMILY SSF46689 198 280 5.64E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4683 cb34f19326b2fe3e4f8a964dd66166e8 385 Gene3D G3DSA:1.10.10.60 6 59 4.3E-17 T 14-10-2018 Amir_4683 cb34f19326b2fe3e4f8a964dd66166e8 385 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 60 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_4683 cb34f19326b2fe3e4f8a964dd66166e8 385 SUPERFAMILY SSF46689 10 80 6.98E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4683 cb34f19326b2fe3e4f8a964dd66166e8 385 Gene3D G3DSA:1.10.357.10 252 384 1.5E-20 T 14-10-2018 Amir_4683 cb34f19326b2fe3e4f8a964dd66166e8 385 Gene3D G3DSA:1.10.357.10 60 187 9.8E-14 T 14-10-2018 Amir_4956 0587351ffa43866a0231a3f2a5c012f8 245 Gene3D G3DSA:3.90.550.10 6 245 1.9E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_4956 0587351ffa43866a0231a3f2a5c012f8 245 SUPERFAMILY SSF53448 16 215 1.59E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_4956 0587351ffa43866a0231a3f2a5c012f8 245 Pfam PF00535 Glycosyl transferase family 2 16 141 4.6E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_5297 8ddd53a1e138a7cff88d0a8f27f0b213 320 Gene3D G3DSA:3.90.180.10 15 306 1.1E-79 T 14-10-2018 Amir_5297 8ddd53a1e138a7cff88d0a8f27f0b213 320 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 23 85 1.8E-10 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_5297 8ddd53a1e138a7cff88d0a8f27f0b213 320 SUPERFAMILY SSF50129 10 156 5.33E-38 T 14-10-2018 IPR011032 GroES-like superfamily Amir_5297 8ddd53a1e138a7cff88d0a8f27f0b213 320 Gene3D G3DSA:3.40.50.720 136 267 1.1E-79 T 14-10-2018 Amir_5297 8ddd53a1e138a7cff88d0a8f27f0b213 320 SUPERFAMILY SSF51735 130 290 4.29E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5297 8ddd53a1e138a7cff88d0a8f27f0b213 320 SMART SM00829 4 317 5.1E-12 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_5297 8ddd53a1e138a7cff88d0a8f27f0b213 320 Pfam PF00107 Zinc-binding dehydrogenase 162 281 9.9E-14 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_1511 0da839d36832945c952d86ac9c3fdfb4 266 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Amir_1511 0da839d36832945c952d86ac9c3fdfb4 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Amir_1511 0da839d36832945c952d86ac9c3fdfb4 266 Gene3D G3DSA:3.40.190.80 144 262 4.3E-25 T 14-10-2018 Amir_1511 0da839d36832945c952d86ac9c3fdfb4 266 Gene3D G3DSA:3.30.540.10 3 142 2.2E-42 T 14-10-2018 Amir_1511 0da839d36832945c952d86ac9c3fdfb4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 3.5E-38 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_1511 0da839d36832945c952d86ac9c3fdfb4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 3.5E-38 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_1511 0da839d36832945c952d86ac9c3fdfb4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 3.5E-38 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_1511 0da839d36832945c952d86ac9c3fdfb4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 3.5E-38 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_1511 0da839d36832945c952d86ac9c3fdfb4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 3.5E-38 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_1511 0da839d36832945c952d86ac9c3fdfb4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 3.5E-38 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_1511 0da839d36832945c952d86ac9c3fdfb4 266 Pfam PF00459 Inositol monophosphatase family 7 248 9.9E-58 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_1511 0da839d36832945c952d86ac9c3fdfb4 266 SUPERFAMILY SSF56655 6 258 7.33E-65 T 14-10-2018 Amir_5283 5849eaa00ab0046dc476b657654a4733 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 1.7E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5283 5849eaa00ab0046dc476b657654a4733 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 3.6E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5283 5849eaa00ab0046dc476b657654a4733 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 3.6E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5283 5849eaa00ab0046dc476b657654a4733 184 Gene3D G3DSA:1.10.357.10 2 181 6.7E-42 T 14-10-2018 Amir_5283 5849eaa00ab0046dc476b657654a4733 184 Pfam PF13305 WHG domain 85 164 3.3E-12 T 14-10-2018 IPR025996 WHG domain Amir_5283 5849eaa00ab0046dc476b657654a4733 184 SUPERFAMILY SSF48498 80 171 1.0E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_5283 5849eaa00ab0046dc476b657654a4733 184 SUPERFAMILY SSF46689 6 77 1.54E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2679 c5d492649c3e25e4daa0a411b1f00b76 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 1.3E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2679 c5d492649c3e25e4daa0a411b1f00b76 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 6.9E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2679 c5d492649c3e25e4daa0a411b1f00b76 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 6.9E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2679 c5d492649c3e25e4daa0a411b1f00b76 210 Gene3D G3DSA:1.10.357.10 3 185 6.1E-28 T 14-10-2018 Amir_2679 c5d492649c3e25e4daa0a411b1f00b76 210 SUPERFAMILY SSF46689 4 73 1.64E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2679 c5d492649c3e25e4daa0a411b1f00b76 210 SUPERFAMILY SSF48498 77 178 6.67E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_2679 c5d492649c3e25e4daa0a411b1f00b76 210 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 81 174 4.9E-7 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal Amir_0008 7973fa1f4d5b4b92a1c79199282491d5 288 Pfam PF12089 Transmembrane domain of unknown function (DUF3566) 170 286 2.0E-45 T 14-10-2018 IPR021949 Domain of unknown function DUF3566. transmembrane Amir_4065 3290e05f76b18c7276f239c1994076d1 195 SUPERFAMILY SSF46689 2 76 9.48E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4065 3290e05f76b18c7276f239c1994076d1 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4065 3290e05f76b18c7276f239c1994076d1 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4065 3290e05f76b18c7276f239c1994076d1 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 1.8E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4065 3290e05f76b18c7276f239c1994076d1 195 SUPERFAMILY SSF48498 79 192 3.18E-25 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4065 3290e05f76b18c7276f239c1994076d1 195 Gene3D G3DSA:1.10.357.10 68 194 6.5E-30 T 14-10-2018 Amir_4065 3290e05f76b18c7276f239c1994076d1 195 Gene3D G3DSA:1.10.10.60 1 67 6.4E-30 T 14-10-2018 Amir_0005 3bf6ee8e302cd8143d0bab41987ef583 143 Pfam PF05258 Protein of unknown function (DUF721) 31 118 2.2E-25 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 Amir_1201 68e99732991777ee24cb7006298c2ac7 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 274 5.5E-80 T 14-10-2018 IPR003797 DegV Amir_1201 68e99732991777ee24cb7006298c2ac7 280 Gene3D G3DSA:3.30.1180.10 151 275 4.9E-39 T 14-10-2018 Amir_1201 68e99732991777ee24cb7006298c2ac7 280 Gene3D G3DSA:3.40.50.10170 1 150 2.8E-39 T 14-10-2018 Amir_1201 68e99732991777ee24cb7006298c2ac7 280 SUPERFAMILY SSF82549 2 276 4.71E-72 T 14-10-2018 Amir_1201 68e99732991777ee24cb7006298c2ac7 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 276 2.3E-76 T 14-10-2018 IPR003797 DegV Amir_2098 7f7d39bd765da0bde1d0aa0e2fa9c7ad 330 Pfam PF00296 Luciferase-like monooxygenase 8 305 1.3E-47 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_2098 7f7d39bd765da0bde1d0aa0e2fa9c7ad 330 SUPERFAMILY SSF51679 2 328 2.49E-53 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_2098 7f7d39bd765da0bde1d0aa0e2fa9c7ad 330 Gene3D G3DSA:3.20.20.30 1 329 3.0E-64 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_2098 7f7d39bd765da0bde1d0aa0e2fa9c7ad 330 TIGRFAM TIGR03842 F420_CPS_4043: F420-dependent oxidoreductase, CPS_4043 family 2 330 1.3E-179 T 14-10-2018 IPR022315 F420-dependent oxidoreductase-predicted, CPS4043 Amir_1496 be0e11ba230efc846da6592b7325148d 502 Gene3D G3DSA:1.10.10.2840 376 499 2.8E-18 T 14-10-2018 Amir_1496 be0e11ba230efc846da6592b7325148d 502 Pfam PF13556 PucR C-terminal helix-turn-helix domain 437 493 6.5E-19 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Amir_5321 e4d61f0bc491092c98d6cc96ff001d7e 426 Gene3D G3DSA:2.80.10.50 298 424 5.5E-40 T 14-10-2018 Amir_5321 e4d61f0bc491092c98d6cc96ff001d7e 426 SMART SM00458 296 425 7.3E-29 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_5321 e4d61f0bc491092c98d6cc96ff001d7e 426 Pfam PF00722 Glycosyl hydrolases family 16 75 279 8.6E-44 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 Amir_5321 e4d61f0bc491092c98d6cc96ff001d7e 426 Gene3D G3DSA:2.60.120.200 39 290 1.0E-92 T 14-10-2018 Amir_5321 e4d61f0bc491092c98d6cc96ff001d7e 426 SUPERFAMILY SSF49899 34 283 2.11E-76 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_5321 e4d61f0bc491092c98d6cc96ff001d7e 426 Pfam PF00652 Ricin-type beta-trefoil lectin domain 302 422 1.8E-28 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_5321 e4d61f0bc491092c98d6cc96ff001d7e 426 SUPERFAMILY SSF50370 305 423 9.31E-37 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_2083 f0a0b82560d7d8e469f1ce298fc2ab2a 167 Gene3D G3DSA:1.10.1220.10 102 163 2.0E-8 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Amir_2083 f0a0b82560d7d8e469f1ce298fc2ab2a 167 SUPERFAMILY SSF47598 101 152 1.08E-12 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Amir_2083 f0a0b82560d7d8e469f1ce298fc2ab2a 167 Pfam PF01402 Ribbon-helix-helix protein, copG family 105 140 7.0E-6 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Amir_6979 2977e7bc6119f21bf841dc8bf39610b1 220 SUPERFAMILY SSF48498 97 202 5.56E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_6979 2977e7bc6119f21bf841dc8bf39610b1 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 3.2E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6979 2977e7bc6119f21bf841dc8bf39610b1 220 SUPERFAMILY SSF46689 12 84 2.39E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_6979 2977e7bc6119f21bf841dc8bf39610b1 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 2.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6979 2977e7bc6119f21bf841dc8bf39610b1 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 2.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6979 2977e7bc6119f21bf841dc8bf39610b1 220 Gene3D G3DSA:1.10.357.10 7 210 3.5E-56 T 14-10-2018 Amir_3056 260eed60ff65a4d72fc2de01e901ce3f 694 SUPERFAMILY SSF51126 335 636 7.96E-52 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_3056 260eed60ff65a4d72fc2de01e901ce3f 694 Pfam PF04542 Sigma-70 region 2 24 90 2.6E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_3056 260eed60ff65a4d72fc2de01e901ce3f 694 Pfam PF13229 Right handed beta helix region 433 591 1.3E-7 T 14-10-2018 IPR039448 Right handed beta helix domain Amir_3056 260eed60ff65a4d72fc2de01e901ce3f 694 Gene3D G3DSA:2.160.20.10 332 694 4.6E-75 T 14-10-2018 IPR012334 Pectin lyase fold Amir_3056 260eed60ff65a4d72fc2de01e901ce3f 694 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 179 6.7E-18 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_3056 260eed60ff65a4d72fc2de01e901ce3f 694 Gene3D G3DSA:1.10.1740.10 1 115 1.9E-19 T 14-10-2018 Amir_3056 260eed60ff65a4d72fc2de01e901ce3f 694 SMART SM00710 510 532 10.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_3056 260eed60ff65a4d72fc2de01e901ce3f 694 SMART SM00710 479 507 1400.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_3056 260eed60ff65a4d72fc2de01e901ce3f 694 SMART SM00710 455 477 1200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_3056 260eed60ff65a4d72fc2de01e901ce3f 694 SMART SM00710 534 568 2800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_3056 260eed60ff65a4d72fc2de01e901ce3f 694 SMART SM00710 592 614 8200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_3056 260eed60ff65a4d72fc2de01e901ce3f 694 SUPERFAMILY SSF88946 6 97 4.71E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_2024 9922feb61d6310fed7658577746b896d 299 Pfam PF03301 Tryptophan 2,3-dioxygenase 35 297 5.7E-54 T 14-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 Amir_2024 9922feb61d6310fed7658577746b896d 299 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 36 299 37.052 T 14-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 Amir_2024 9922feb61d6310fed7658577746b896d 299 SUPERFAMILY SSF140959 42 299 5.69E-85 T 14-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 Amir_2024 9922feb61d6310fed7658577746b896d 299 Gene3D G3DSA:1.20.58.480 41 299 6.7E-79 T 14-10-2018 Amir_1719 d3c30ef0db71b776926909e1ec7825cf 592 SUPERFAMILY SSF50249 2 104 1.14E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_1719 d3c30ef0db71b776926909e1ec7825cf 592 Gene3D G3DSA:2.40.50.140 1 107 2.6E-32 T 14-10-2018 Amir_1719 d3c30ef0db71b776926909e1ec7825cf 592 SUPERFAMILY SSF55261 290 412 4.14E-35 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Amir_1719 d3c30ef0db71b776926909e1ec7825cf 592 Pfam PF02938 GAD domain 313 394 1.7E-14 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Amir_1719 d3c30ef0db71b776926909e1ec7825cf 592 SUPERFAMILY SSF55681 115 583 1.02E-99 T 14-10-2018 Amir_1719 d3c30ef0db71b776926909e1ec7825cf 592 Gene3D G3DSA:3.30.930.10 117 581 6.4E-179 T 14-10-2018 Amir_1719 d3c30ef0db71b776926909e1ec7825cf 592 Pfam PF01336 OB-fold nucleic acid binding domain 19 101 6.8E-15 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Amir_1719 d3c30ef0db71b776926909e1ec7825cf 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 2.4E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_1719 d3c30ef0db71b776926909e1ec7825cf 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 2.4E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_1719 d3c30ef0db71b776926909e1ec7825cf 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 2.4E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_1719 d3c30ef0db71b776926909e1ec7825cf 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 2.4E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_1719 d3c30ef0db71b776926909e1ec7825cf 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 581 7.9E-208 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Amir_1719 d3c30ef0db71b776926909e1ec7825cf 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 585 32.075 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Amir_1719 d3c30ef0db71b776926909e1ec7825cf 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 558 1.9E-101 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_1719 d3c30ef0db71b776926909e1ec7825cf 592 Gene3D G3DSA:3.30.1360.30 273 412 6.4E-179 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Amir_3454 f1340d9bf0502cd4a9dc025b1705a3c8 300 SUPERFAMILY SSF141986 146 279 3.01E-32 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily Amir_3454 f1340d9bf0502cd4a9dc025b1705a3c8 300 Pfam PF02016 LD-carboxypeptidase 11 274 7.6E-61 T 14-10-2018 IPR003507 Peptidase family S66 Amir_3454 f1340d9bf0502cd4a9dc025b1705a3c8 300 Gene3D G3DSA:3.40.50.10740 2 158 5.9E-43 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal Amir_3454 f1340d9bf0502cd4a9dc025b1705a3c8 300 SUPERFAMILY SSF52317 4 157 5.95E-36 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_3454 f1340d9bf0502cd4a9dc025b1705a3c8 300 PIRSF PIRSF028757 3 288 4.6E-54 T 14-10-2018 IPR003507 Peptidase family S66 Amir_3454 f1340d9bf0502cd4a9dc025b1705a3c8 300 Gene3D G3DSA:3.50.30.60 161 281 3.5E-30 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily Amir_4706 cc0443432d69df82c2b6a8ff5e46709d 133 SUPERFAMILY SSF54427 11 128 7.21E-24 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_4706 cc0443432d69df82c2b6a8ff5e46709d 133 Pfam PF12680 SnoaL-like domain 18 120 1.4E-9 T 14-10-2018 IPR037401 SnoaL-like domain Amir_4706 cc0443432d69df82c2b6a8ff5e46709d 133 Gene3D G3DSA:3.10.450.50 10 131 3.0E-26 T 14-10-2018 Amir_6974 8e7eccd2ef5bc2e43a68e0bb1c828f1a 267 SUPERFAMILY SSF54637 162 264 4.42E-19 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_6974 8e7eccd2ef5bc2e43a68e0bb1c828f1a 267 SUPERFAMILY SSF54637 29 148 3.44E-10 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_6974 8e7eccd2ef5bc2e43a68e0bb1c828f1a 267 Pfam PF01575 MaoC like domain 172 230 1.1E-11 T 14-10-2018 IPR002539 MaoC-like dehydratase domain Amir_6974 8e7eccd2ef5bc2e43a68e0bb1c828f1a 267 Gene3D G3DSA:3.10.129.10 27 267 3.1E-71 T 14-10-2018 Amir_0090 9b65aaff3ef29af6f1c383238ced8a24 394 Gene3D G3DSA:3.90.850.10 99 390 1.6E-96 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Amir_0090 9b65aaff3ef29af6f1c383238ced8a24 394 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 107 367 7.2E-55 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Amir_0090 9b65aaff3ef29af6f1c383238ced8a24 394 SUPERFAMILY SSF63433 2 86 1.57E-12 T 14-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 Amir_0090 9b65aaff3ef29af6f1c383238ced8a24 394 SUPERFAMILY SSF56529 104 387 1.96E-83 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Amir_0090 9b65aaff3ef29af6f1c383238ced8a24 394 Gene3D G3DSA:2.30.30.230 1 94 3.0E-9 T 14-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 Amir_1923 dacf620b0a4bc908c189eacc12d1635b 266 SUPERFAMILY SSF53448 18 227 2.91E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_1923 dacf620b0a4bc908c189eacc12d1635b 266 Pfam PF00535 Glycosyl transferase family 2 19 184 7.3E-20 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_1923 dacf620b0a4bc908c189eacc12d1635b 266 Gene3D G3DSA:3.90.550.10 13 257 7.7E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0675 be13c9217bb614cdb1e17b3485c55e44 320 Gene3D G3DSA:3.30.420.150 129 318 2.0E-59 T 14-10-2018 Amir_0675 be13c9217bb614cdb1e17b3485c55e44 320 SUPERFAMILY SSF53067 3 127 1.55E-32 T 14-10-2018 Amir_0675 be13c9217bb614cdb1e17b3485c55e44 320 Gene3D G3DSA:3.30.420.40 1 128 8.4E-45 T 14-10-2018 Amir_0675 be13c9217bb614cdb1e17b3485c55e44 320 Pfam PF02541 Ppx/GppA phosphatase family 22 312 8.2E-70 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Amir_0675 be13c9217bb614cdb1e17b3485c55e44 320 SUPERFAMILY SSF53067 133 316 3.89E-35 T 14-10-2018 Amir_2446 06c24f4bea64b21f5f96bbb0ec443a39 308 Gene3D G3DSA:3.40.190.10 170 270 3.9E-37 T 14-10-2018 Amir_2446 06c24f4bea64b21f5f96bbb0ec443a39 308 SUPERFAMILY SSF46785 2 112 2.09E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2446 06c24f4bea64b21f5f96bbb0ec443a39 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.5E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_2446 06c24f4bea64b21f5f96bbb0ec443a39 308 SUPERFAMILY SSF53850 89 299 5.07E-32 T 14-10-2018 Amir_2446 06c24f4bea64b21f5f96bbb0ec443a39 308 Pfam PF03466 LysR substrate binding domain 88 296 3.8E-31 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_2446 06c24f4bea64b21f5f96bbb0ec443a39 308 Gene3D G3DSA:1.10.10.10 2 89 2.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2446 06c24f4bea64b21f5f96bbb0ec443a39 308 Gene3D G3DSA:3.40.190.10 92 279 3.9E-37 T 14-10-2018 Amir_4135 591c7ac0aa3f12f61abb1c91c515f0a7 460 SUPERFAMILY SSF51905 3 345 3.31E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4135 591c7ac0aa3f12f61abb1c91c515f0a7 460 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 319 7.2E-7 T 14-10-2018 Amir_4135 591c7ac0aa3f12f61abb1c91c515f0a7 460 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 319 335 7.2E-7 T 14-10-2018 Amir_4135 591c7ac0aa3f12f61abb1c91c515f0a7 460 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 164 179 7.2E-7 T 14-10-2018 Amir_4135 591c7ac0aa3f12f61abb1c91c515f0a7 460 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 7.2E-7 T 14-10-2018 Amir_4135 591c7ac0aa3f12f61abb1c91c515f0a7 460 Pfam PF01494 FAD binding domain 4 341 1.1E-11 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_4135 591c7ac0aa3f12f61abb1c91c515f0a7 460 Gene3D G3DSA:3.50.50.60 1 369 8.1E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3836 f07114e0d72d8ec4b323fca18454d2a4 338 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 120 6.8E-9 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amir_3836 f07114e0d72d8ec4b323fca18454d2a4 338 SUPERFAMILY SSF51735 1 150 2.96E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3836 f07114e0d72d8ec4b323fca18454d2a4 338 SUPERFAMILY SSF55347 131 281 3.27E-5 T 14-10-2018 Amir_3836 f07114e0d72d8ec4b323fca18454d2a4 338 Gene3D G3DSA:3.40.50.720 1 130 6.6E-14 T 14-10-2018 Amir_3836 f07114e0d72d8ec4b323fca18454d2a4 338 Gene3D G3DSA:3.30.360.10 131 318 1.2E-7 T 14-10-2018 Amir_4464 ba14ebf0ed9b571ea2244dfa9ae09721 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 3.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4464 ba14ebf0ed9b571ea2244dfa9ae09721 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 3.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4464 ba14ebf0ed9b571ea2244dfa9ae09721 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 69 5.1E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4464 ba14ebf0ed9b571ea2244dfa9ae09721 188 Gene3D G3DSA:1.10.357.10 8 188 1.2E-47 T 14-10-2018 Amir_4464 ba14ebf0ed9b571ea2244dfa9ae09721 188 SUPERFAMILY SSF48498 90 187 2.45E-12 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4464 ba14ebf0ed9b571ea2244dfa9ae09721 188 SUPERFAMILY SSF46689 12 87 2.28E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_6213 6665ad862c85cdd9801b99f6e4b88adb 1079 PRINTS PR00723 Subtilisin serine protease family (S8) signature 179 198 5.5E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_6213 6665ad862c85cdd9801b99f6e4b88adb 1079 PRINTS PR00723 Subtilisin serine protease family (S8) signature 359 372 5.5E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_6213 6665ad862c85cdd9801b99f6e4b88adb 1079 PRINTS PR00723 Subtilisin serine protease family (S8) signature 554 570 5.5E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_6213 6665ad862c85cdd9801b99f6e4b88adb 1079 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 184 195 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_6213 6665ad862c85cdd9801b99f6e4b88adb 1079 Gene3D G3DSA:3.40.50.200 162 251 1.3E-8 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_6213 6665ad862c85cdd9801b99f6e4b88adb 1079 Gene3D G3DSA:3.40.50.200 296 627 1.2E-65 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_6213 6665ad862c85cdd9801b99f6e4b88adb 1079 SUPERFAMILY SSF52743 166 618 4.45E-55 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_6213 6665ad862c85cdd9801b99f6e4b88adb 1079 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 555 565 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_6213 6665ad862c85cdd9801b99f6e4b88adb 1079 Pfam PF00082 Subtilase family 179 610 1.4E-53 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_2405 051b78ef1d56add2b1ea3fb9a932b156 294 Gene3D G3DSA:1.10.3720.10 47 290 2.8E-67 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2405 051b78ef1d56add2b1ea3fb9a932b156 294 SUPERFAMILY SSF161098 51 278 8.37E-58 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2405 051b78ef1d56add2b1ea3fb9a932b156 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 286 8.9E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_6853 867e999a103d95d5b92922c6f0463b4d 338 Gene3D G3DSA:3.30.360.10 137 265 3.5E-79 T 14-10-2018 Amir_6853 867e999a103d95d5b92922c6f0463b4d 338 SUPERFAMILY SSF51735 2 146 1.75E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6853 867e999a103d95d5b92922c6f0463b4d 338 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 118 6.1E-17 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amir_6853 867e999a103d95d5b92922c6f0463b4d 338 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 133 237 5.0E-7 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Amir_6853 867e999a103d95d5b92922c6f0463b4d 338 SUPERFAMILY SSF55347 123 286 3.66E-26 T 14-10-2018 Amir_6853 867e999a103d95d5b92922c6f0463b4d 338 Gene3D G3DSA:3.40.50.720 2 317 3.5E-79 T 14-10-2018 Amir_6677 01f6b42da785cdb9cf0eb8fb700f6f4b 431 SUPERFAMILY SSF142019 7 239 9.02E-86 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6677 01f6b42da785cdb9cf0eb8fb700f6f4b 431 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 332 412 9.0E-31 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6677 01f6b42da785cdb9cf0eb8fb700f6f4b 431 SUPERFAMILY SSF140490 326 417 6.54E-34 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6677 01f6b42da785cdb9cf0eb8fb700f6f4b 431 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 9 412 1.5E-187 T 14-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6677 01f6b42da785cdb9cf0eb8fb700f6f4b 431 Gene3D G3DSA:3.10.20.600 232 325 1.4E-29 T 14-10-2018 Amir_6677 01f6b42da785cdb9cf0eb8fb700f6f4b 431 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 167 182 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6677 01f6b42da785cdb9cf0eb8fb700f6f4b 431 SUPERFAMILY SSF142984 241 323 4.05E-23 T 14-10-2018 Amir_6677 01f6b42da785cdb9cf0eb8fb700f6f4b 431 Pfam PF10531 SLBB domain 244 290 1.1E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6677 01f6b42da785cdb9cf0eb8fb700f6f4b 431 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 341 352 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6677 01f6b42da785cdb9cf0eb8fb700f6f4b 431 Gene3D G3DSA:3.40.50.11540 53 231 2.7E-78 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6677 01f6b42da785cdb9cf0eb8fb700f6f4b 431 Gene3D G3DSA:1.20.1440.230 327 427 5.4E-32 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6677 01f6b42da785cdb9cf0eb8fb700f6f4b 431 SMART SM00928 328 373 5.0E-23 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6677 01f6b42da785cdb9cf0eb8fb700f6f4b 431 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 49 219 1.0E-46 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6023 a663d328e98b403842069bce3a2091f9 139 Pfam PF07884 Vitamin K epoxide reductase family 8 130 1.4E-26 T 14-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 Amir_6023 a663d328e98b403842069bce3a2091f9 139 Gene3D G3DSA:1.20.1440.130 1 138 4.5E-28 T 14-10-2018 IPR038354 VKOR domain superfamily Reactome: R-HSA-6806664 Amir_6023 a663d328e98b403842069bce3a2091f9 139 SMART SM00756 2 135 2.6E-26 T 14-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 Amir_6746 63fb68323ca1bc877a6194497fb9cfd6 272 SUPERFAMILY SSF51658 8 256 6.63E-41 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Amir_6746 63fb68323ca1bc877a6194497fb9cfd6 272 Gene3D G3DSA:3.20.20.150 6 267 6.3E-41 T 14-10-2018 Amir_6746 63fb68323ca1bc877a6194497fb9cfd6 272 Pfam PF01261 Xylose isomerase-like TIM barrel 28 219 4.7E-19 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Amir_6322 a19a22565fd1e12ab3c5c9844e354095 503 PIRSF PIRSF006060 8 497 8.3E-93 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amir_6322 a19a22565fd1e12ab3c5c9844e354095 503 Pfam PF13520 Amino acid permease 31 458 7.9E-51 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amir_6322 a19a22565fd1e12ab3c5c9844e354095 503 Gene3D G3DSA:1.20.1740.10 25 494 6.5E-119 T 14-10-2018 Amir_5877 d2de68742712dd833527f35aa3e0fd5d 175 Pfam PF01161 Phosphatidylethanolamine-binding protein 36 173 3.4E-36 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein Amir_5877 d2de68742712dd833527f35aa3e0fd5d 175 Gene3D G3DSA:3.90.280.10 6 175 1.5E-52 T 14-10-2018 IPR036610 PEBP-like superfamily Amir_5877 d2de68742712dd833527f35aa3e0fd5d 175 SUPERFAMILY SSF49777 7 167 1.44E-49 T 14-10-2018 IPR036610 PEBP-like superfamily Amir_5877 d2de68742712dd833527f35aa3e0fd5d 175 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 40 173 3.9E-40 T 14-10-2018 IPR005247 YbhB/YbcL Amir_0034 34b5603280bc5d063c9ad36ece018c3c 435 SUPERFAMILY SSF103473 48 432 1.83E-44 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_0034 34b5603280bc5d063c9ad36ece018c3c 435 Gene3D G3DSA:1.20.1250.20 43 432 8.8E-42 T 14-10-2018 Amir_0034 34b5603280bc5d063c9ad36ece018c3c 435 Pfam PF07690 Major Facilitator Superfamily 294 428 1.5E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_1225 39a7a50bbfcaafe79619ce686abeb131 322 Pfam PF00107 Zinc-binding dehydrogenase 167 283 7.9E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_1225 39a7a50bbfcaafe79619ce686abeb131 322 SUPERFAMILY SSF51735 128 289 1.65E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1225 39a7a50bbfcaafe79619ce686abeb131 322 SUPERFAMILY SSF50129 14 156 6.13E-29 T 14-10-2018 IPR011032 GroES-like superfamily Amir_1225 39a7a50bbfcaafe79619ce686abeb131 322 SMART SM00829 13 319 1.3E-12 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_1225 39a7a50bbfcaafe79619ce686abeb131 322 Gene3D G3DSA:3.90.180.10 18 312 1.4E-72 T 14-10-2018 Amir_1225 39a7a50bbfcaafe79619ce686abeb131 322 Gene3D G3DSA:3.40.50.720 137 269 1.4E-72 T 14-10-2018 Amir_1568 54086694da3d0282adb450f610e03d85 219 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 9.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1568 54086694da3d0282adb450f610e03d85 219 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 9.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1568 54086694da3d0282adb450f610e03d85 219 SMART SM00345 13 71 8.6E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1568 54086694da3d0282adb450f610e03d85 219 SMART SM00895 81 204 5.2E-20 T 14-10-2018 IPR011711 GntR, C-terminal Amir_1568 54086694da3d0282adb450f610e03d85 219 SUPERFAMILY SSF48008 82 209 1.73E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_1568 54086694da3d0282adb450f610e03d85 219 Gene3D G3DSA:1.20.120.530 76 214 1.8E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_1568 54086694da3d0282adb450f610e03d85 219 SUPERFAMILY SSF46785 8 75 7.96E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1568 54086694da3d0282adb450f610e03d85 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 4.7E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1568 54086694da3d0282adb450f610e03d85 219 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 42 61 3.4E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_1568 54086694da3d0282adb450f610e03d85 219 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 42 3.4E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_1568 54086694da3d0282adb450f610e03d85 219 Gene3D G3DSA:1.10.10.10 3 71 3.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1568 54086694da3d0282adb450f610e03d85 219 Pfam PF07729 FCD domain 82 204 1.2E-23 T 14-10-2018 IPR011711 GntR, C-terminal Amir_1677 e7b90a4e33cb06773e512a68cd65d246 435 Gene3D G3DSA:1.10.10.10 11 88 1.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1677 e7b90a4e33cb06773e512a68cd65d246 435 SUPERFAMILY SSF53067 92 415 3.6E-44 T 14-10-2018 Amir_1677 e7b90a4e33cb06773e512a68cd65d246 435 Gene3D G3DSA:3.30.420.40 100 409 5.9E-65 T 14-10-2018 Amir_1677 e7b90a4e33cb06773e512a68cd65d246 435 Pfam PF00480 ROK family 95 411 8.4E-39 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_1677 e7b90a4e33cb06773e512a68cd65d246 435 Gene3D G3DSA:3.30.420.40 222 399 5.9E-65 T 14-10-2018 Amir_1677 e7b90a4e33cb06773e512a68cd65d246 435 ProSitePatterns PS01125 ROK family signature. 232 259 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_1677 e7b90a4e33cb06773e512a68cd65d246 435 SUPERFAMILY SSF46785 21 83 3.59E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4252 36914e12fbd384bfb69adcc3385d73ac 136 SUPERFAMILY SSF54427 43 132 6.67E-13 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_4252 36914e12fbd384bfb69adcc3385d73ac 136 Pfam PF13474 SnoaL-like domain 51 133 2.4E-8 T 14-10-2018 IPR037401 SnoaL-like domain Amir_4252 36914e12fbd384bfb69adcc3385d73ac 136 Gene3D G3DSA:3.10.450.50 2 135 1.3E-13 T 14-10-2018 Amir_2790 86eccaa8b00b56bcab935a88e85b2390 729 Pfam PF03176 MMPL family 441 694 7.9E-35 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Amir_2790 86eccaa8b00b56bcab935a88e85b2390 729 Pfam PF03176 MMPL family 45 344 3.9E-63 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Amir_2790 86eccaa8b00b56bcab935a88e85b2390 729 SUPERFAMILY SSF82866 462 694 9.29E-30 T 14-10-2018 Amir_2790 86eccaa8b00b56bcab935a88e85b2390 729 SUPERFAMILY SSF82866 119 331 1.14E-29 T 14-10-2018 Amir_2790 86eccaa8b00b56bcab935a88e85b2390 729 Gene3D G3DSA:1.20.1640.10 489 693 1.1E-6 T 14-10-2018 Amir_2790 86eccaa8b00b56bcab935a88e85b2390 729 Gene3D G3DSA:1.20.1640.10 161 345 1.6E-7 T 14-10-2018 Amir_2668 7bc98238755b0efd9b3250c26d676c4b 415 SUPERFAMILY SSF56059 108 332 2.3E-37 T 14-10-2018 Amir_2668 7bc98238755b0efd9b3250c26d676c4b 415 Gene3D G3DSA:3.30.470.20 109 414 4.1E-68 T 14-10-2018 Amir_2668 7bc98238755b0efd9b3250c26d676c4b 415 SMART SM01209 113 294 2.3E-4 T 14-10-2018 Amir_2668 7bc98238755b0efd9b3250c26d676c4b 415 Pfam PF13535 ATP-grasp domain 149 297 1.2E-14 T 14-10-2018 Amir_6225 9fb3125333d62912df725412064a3877 529 Gene3D G3DSA:2.40.110.20 128 280 6.2E-57 T 14-10-2018 Amir_6225 9fb3125333d62912df725412064a3877 529 Gene3D G3DSA:1.20.140.10 281 425 1.3E-28 T 14-10-2018 Amir_6225 9fb3125333d62912df725412064a3877 529 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 270 2.8E-17 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amir_6225 9fb3125333d62912df725412064a3877 529 SUPERFAMILY SSF47203 286 431 7.57E-36 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_6225 9fb3125333d62912df725412064a3877 529 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 424 5.0E-23 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amir_6225 9fb3125333d62912df725412064a3877 529 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 383 402 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amir_6225 9fb3125333d62912df725412064a3877 529 SUPERFAMILY SSF56645 54 290 4.84E-41 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_3244 3d0c1f17597a7d6f0177f1423b51690f 320 SUPERFAMILY SSF51445 3 191 9.83E-40 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_3244 3d0c1f17597a7d6f0177f1423b51690f 320 SUPERFAMILY SSF54106 276 318 2.35E-8 T 14-10-2018 Amir_3244 3d0c1f17597a7d6f0177f1423b51690f 320 SUPERFAMILY SSF54106 221 266 2.09E-9 T 14-10-2018 Amir_3244 3d0c1f17597a7d6f0177f1423b51690f 320 SMART SM00257 276 320 1.2E-8 T 14-10-2018 IPR018392 LysM domain Amir_3244 3d0c1f17597a7d6f0177f1423b51690f 320 SMART SM00257 222 266 3.6E-12 T 14-10-2018 IPR018392 LysM domain Amir_3244 3d0c1f17597a7d6f0177f1423b51690f 320 SMART SM00641 3 109 4.9E-6 T 14-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup Amir_3244 3d0c1f17597a7d6f0177f1423b51690f 320 Gene3D G3DSA:3.10.350.10 275 320 6.9E-14 T 14-10-2018 IPR036779 LysM domain superfamily Amir_3244 3d0c1f17597a7d6f0177f1423b51690f 320 Pfam PF01183 Glycosyl hydrolases family 25 6 181 8.9E-28 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 Amir_3244 3d0c1f17597a7d6f0177f1423b51690f 320 Gene3D G3DSA:3.20.20.80 2 194 1.3E-40 T 14-10-2018 Amir_3244 3d0c1f17597a7d6f0177f1423b51690f 320 Pfam PF01476 LysM domain 277 315 1.7E-11 T 14-10-2018 IPR018392 LysM domain Amir_3244 3d0c1f17597a7d6f0177f1423b51690f 320 Pfam PF01476 LysM domain 223 266 2.9E-12 T 14-10-2018 IPR018392 LysM domain Amir_3244 3d0c1f17597a7d6f0177f1423b51690f 320 Gene3D G3DSA:3.10.350.10 209 271 3.5E-14 T 14-10-2018 IPR036779 LysM domain superfamily Amir_0869 46b247a0d5b716f9023e921aedb71f25 1354 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1213 1300 2.3E-19 T 14-10-2018 Amir_0869 46b247a0d5b716f9023e921aedb71f25 1354 SUPERFAMILY SSF52540 12 1302 3.59E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0869 46b247a0d5b716f9023e921aedb71f25 1354 TIGRFAM TIGR02680 TIGR02680: TIGR02680 family protein 4 1347 8.6E-211 T 14-10-2018 IPR013496 Conserved hypothetical protein CHP02680 Amir_0869 46b247a0d5b716f9023e921aedb71f25 1354 Gene3D G3DSA:3.40.50.300 1164 1309 6.7E-6 T 14-10-2018 Amir_3962 0cd732f2550ecf2c5ca49ae3b8623a6d 315 ProSitePatterns PS00146 Beta-lactamase class-A active site. 86 101 - T 14-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 Amir_3962 0cd732f2550ecf2c5ca49ae3b8623a6d 315 Gene3D G3DSA:3.40.710.10 42 314 4.9E-71 T 14-10-2018 Amir_3962 0cd732f2550ecf2c5ca49ae3b8623a6d 315 Pfam PF13354 Beta-lactamase enzyme family 74 287 5.1E-31 T 14-10-2018 Amir_3962 0cd732f2550ecf2c5ca49ae3b8623a6d 315 PRINTS PR00118 Beta-lactamase class A signature 193 218 2.6E-61 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Amir_3962 0cd732f2550ecf2c5ca49ae3b8623a6d 315 PRINTS PR00118 Beta-lactamase class A signature 230 245 2.6E-61 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Amir_3962 0cd732f2550ecf2c5ca49ae3b8623a6d 315 PRINTS PR00118 Beta-lactamase class A signature 167 191 2.6E-61 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Amir_3962 0cd732f2550ecf2c5ca49ae3b8623a6d 315 PRINTS PR00118 Beta-lactamase class A signature 53 77 2.6E-61 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Amir_3962 0cd732f2550ecf2c5ca49ae3b8623a6d 315 PRINTS PR00118 Beta-lactamase class A signature 84 101 2.6E-61 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Amir_3962 0cd732f2550ecf2c5ca49ae3b8623a6d 315 PRINTS PR00118 Beta-lactamase class A signature 124 149 2.6E-61 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Amir_3962 0cd732f2550ecf2c5ca49ae3b8623a6d 315 PRINTS PR00118 Beta-lactamase class A signature 247 262 2.6E-61 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Amir_3962 0cd732f2550ecf2c5ca49ae3b8623a6d 315 SUPERFAMILY SSF56601 53 312 2.98E-69 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_5163 67518a2e727a71ce5558e905052fe354 257 PIRSF PIRSF006648 6 257 9.4E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_5163 67518a2e727a71ce5558e905052fe354 257 Pfam PF01061 ABC-2 type transporter 27 224 1.1E-16 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Amir_2780 39839abb4a3bfee64fae5425abd12bb0 395 Pfam PF07690 Major Facilitator Superfamily 238 385 7.8E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2780 39839abb4a3bfee64fae5425abd12bb0 395 SUPERFAMILY SSF103473 8 386 2.62E-38 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2780 39839abb4a3bfee64fae5425abd12bb0 395 Gene3D G3DSA:1.20.1250.20 206 391 5.1E-28 T 14-10-2018 Amir_2780 39839abb4a3bfee64fae5425abd12bb0 395 Gene3D G3DSA:1.20.1250.20 12 197 7.3E-9 T 14-10-2018 Amir_0718 a122157daa1868fe2355eaa5f27a02cd 477 SMART SM01240 11 473 3.1E-184 T 14-10-2018 Amir_0718 a122157daa1868fe2355eaa5f27a02cd 477 Gene3D G3DSA:3.20.20.70 4 474 7.8E-136 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_0718 a122157daa1868fe2355eaa5f27a02cd 477 PIRSF PIRSF000130 3 477 2.8E-138 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Amir_0718 a122157daa1868fe2355eaa5f27a02cd 477 SMART SM00116 157 203 6.3 T 14-10-2018 IPR000644 CBS domain Amir_0718 a122157daa1868fe2355eaa5f27a02cd 477 SMART SM00116 98 146 2.0 T 14-10-2018 IPR000644 CBS domain Amir_0718 a122157daa1868fe2355eaa5f27a02cd 477 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 13 472 1.4E-104 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Amir_0718 a122157daa1868fe2355eaa5f27a02cd 477 Pfam PF00571 CBS domain 99 138 2.7E-4 T 14-10-2018 IPR000644 CBS domain Amir_0718 a122157daa1868fe2355eaa5f27a02cd 477 SUPERFAMILY SSF51412 12 471 4.45E-91 T 14-10-2018 Amir_0718 a122157daa1868fe2355eaa5f27a02cd 477 SUPERFAMILY SSF54631 98 201 8.12E-14 T 14-10-2018 Amir_0718 a122157daa1868fe2355eaa5f27a02cd 477 TIGRFAM TIGR01303 IMP_DH_rel_1: IMP dehydrogenase family protein 2 475 2.0E-240 T 14-10-2018 IPR005991 IMP dehydrogenase-related 1 Amir_4099 006d0e2eedf547f617a8cad3a241a229 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 8.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4099 006d0e2eedf547f617a8cad3a241a229 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 8.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4099 006d0e2eedf547f617a8cad3a241a229 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 8.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4099 006d0e2eedf547f617a8cad3a241a229 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 8.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4099 006d0e2eedf547f617a8cad3a241a229 292 Pfam PF00106 short chain dehydrogenase 17 187 1.6E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4099 006d0e2eedf547f617a8cad3a241a229 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.4E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4099 006d0e2eedf547f617a8cad3a241a229 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.4E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4099 006d0e2eedf547f617a8cad3a241a229 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.4E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4099 006d0e2eedf547f617a8cad3a241a229 292 Gene3D G3DSA:3.40.50.720 5 270 3.2E-60 T 14-10-2018 Amir_4099 006d0e2eedf547f617a8cad3a241a229 292 SUPERFAMILY SSF51735 5 270 6.12E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1729 49ee00b37e074a0f04f040ba6a4a03ad 91 SMART SM00363 13 75 1.8E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_1729 49ee00b37e074a0f04f040ba6a4a03ad 91 Gene3D G3DSA:3.10.290.10 1 71 3.0E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amir_1729 49ee00b37e074a0f04f040ba6a4a03ad 91 SUPERFAMILY SSF55174 3 69 3.14E-18 T 14-10-2018 Amir_1729 49ee00b37e074a0f04f040ba6a4a03ad 91 Pfam PF13275 S4 domain 6 68 5.7E-24 T 14-10-2018 Amir_3121 fce77ac7df533d5e4fb57355f62629df 415 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 209 403 2.7E-44 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3121 fce77ac7df533d5e4fb57355f62629df 415 SUPERFAMILY SSF81606 194 401 1.18E-11 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3121 fce77ac7df533d5e4fb57355f62629df 415 SMART SM00331 182 403 1.4E-25 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3121 fce77ac7df533d5e4fb57355f62629df 415 Gene3D G3DSA:3.60.40.10 181 412 7.4E-52 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_4447 807be64aa0c3bcf493b20da7f8406301 398 SUPERFAMILY SSF47203 246 373 1.54E-9 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amir_4447 807be64aa0c3bcf493b20da7f8406301 398 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 33 107 1.9E-7 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amir_4447 807be64aa0c3bcf493b20da7f8406301 398 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 247 375 1.4E-17 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Amir_4447 807be64aa0c3bcf493b20da7f8406301 398 SUPERFAMILY SSF56645 8 219 2.62E-28 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_4447 807be64aa0c3bcf493b20da7f8406301 398 Gene3D G3DSA:1.20.140.10 225 394 4.3E-28 T 14-10-2018 Amir_4447 807be64aa0c3bcf493b20da7f8406301 398 PIRSF PIRSF016578 11 397 1.4E-82 T 14-10-2018 Amir_4447 807be64aa0c3bcf493b20da7f8406301 398 Gene3D G3DSA:1.10.540.10 14 121 7.7E-27 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amir_4447 807be64aa0c3bcf493b20da7f8406301 398 Gene3D G3DSA:2.40.110.10 124 218 1.5E-22 T 14-10-2018 Amir_5407 ec2fae2f744b085fa00967984fcd5392 313 Gene3D G3DSA:1.10.10.60 209 313 1.2E-29 T 14-10-2018 Amir_5407 ec2fae2f744b085fa00967984fcd5392 313 SMART SM00342 225 308 4.4E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_5407 ec2fae2f744b085fa00967984fcd5392 313 Pfam PF01965 DJ-1/PfpI family 3 169 1.9E-18 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Amir_5407 ec2fae2f744b085fa00967984fcd5392 313 SUPERFAMILY SSF46689 261 311 5.82E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5407 ec2fae2f744b085fa00967984fcd5392 313 SUPERFAMILY SSF52317 2 188 1.76E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_5407 ec2fae2f744b085fa00967984fcd5392 313 Pfam PF12833 Helix-turn-helix domain 231 309 1.0E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_5407 ec2fae2f744b085fa00967984fcd5392 313 Gene3D G3DSA:3.40.50.880 1 197 1.5E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_5407 ec2fae2f744b085fa00967984fcd5392 313 SUPERFAMILY SSF46689 211 258 1.15E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2392 07d8af713977861597f7d50c52233a52 646 Gene3D G3DSA:3.30.565.10 2 213 1.9E-70 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2392 07d8af713977861597f7d50c52233a52 646 SMART SM00387 24 180 2.5E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2392 07d8af713977861597f7d50c52233a52 646 SUPERFAMILY SSF55874 2 211 4.42E-57 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2392 07d8af713977861597f7d50c52233a52 646 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 164 1.9E-8 T 14-10-2018 Amir_2392 07d8af713977861597f7d50c52233a52 646 PIRSF PIRSF002583 1 645 9.7E-206 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Amir_2392 07d8af713977861597f7d50c52233a52 646 SUPERFAMILY SSF54211 251 503 2.12E-92 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_2392 07d8af713977861597f7d50c52233a52 646 SUPERFAMILY SSF110942 526 642 9.55E-31 T 14-10-2018 IPR037196 HSP90, C-terminal domain Amir_2392 07d8af713977861597f7d50c52233a52 646 Gene3D G3DSA:3.40.50.11260 421 509 1.8E-32 T 14-10-2018 Amir_2392 07d8af713977861597f7d50c52233a52 646 Pfam PF00183 Hsp90 protein 187 645 7.0E-132 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Amir_2392 07d8af713977861597f7d50c52233a52 646 PRINTS PR00775 90kDa heat shock protein signature 72 89 2.3E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amir_2392 07d8af713977861597f7d50c52233a52 646 PRINTS PR00775 90kDa heat shock protein signature 90 107 2.3E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amir_2392 07d8af713977861597f7d50c52233a52 646 PRINTS PR00775 90kDa heat shock protein signature 118 140 2.3E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amir_2392 07d8af713977861597f7d50c52233a52 646 PRINTS PR00775 90kDa heat shock protein signature 168 185 2.3E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amir_2392 07d8af713977861597f7d50c52233a52 646 PRINTS PR00775 90kDa heat shock protein signature 191 209 2.3E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amir_2392 07d8af713977861597f7d50c52233a52 646 PRINTS PR00775 90kDa heat shock protein signature 2 22 2.3E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amir_2392 07d8af713977861597f7d50c52233a52 646 PRINTS PR00775 90kDa heat shock protein signature 23 45 2.3E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amir_2392 07d8af713977861597f7d50c52233a52 646 Gene3D G3DSA:1.20.120.790 510 642 2.9E-36 T 14-10-2018 IPR037196 HSP90, C-terminal domain Amir_2392 07d8af713977861597f7d50c52233a52 646 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 643 29.065 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Amir_2392 07d8af713977861597f7d50c52233a52 646 Gene3D G3DSA:3.30.70.2140 214 226 1.9E-70 T 14-10-2018 Amir_2392 07d8af713977861597f7d50c52233a52 646 Gene3D G3DSA:3.30.230.80 249 420 5.4E-63 T 14-10-2018 Amir_5032 cd1ef2e7da1f0440ee8fc411a86dd9cd 260 Pfam PF01553 Acyltransferase 34 162 6.3E-25 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_5032 cd1ef2e7da1f0440ee8fc411a86dd9cd 260 SUPERFAMILY SSF69593 16 227 1.11E-38 T 14-10-2018 Amir_5032 cd1ef2e7da1f0440ee8fc411a86dd9cd 260 SMART SM00563 48 166 4.6E-31 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_5373 b61f9d39ca03eabf0149ba2e0fb92c23 327 Gene3D G3DSA:3.20.20.70 8 283 1.8E-32 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5373 b61f9d39ca03eabf0149ba2e0fb92c23 327 SUPERFAMILY SSF102114 10 282 3.79E-39 T 14-10-2018 Amir_5373 b61f9d39ca03eabf0149ba2e0fb92c23 327 Pfam PF04055 Radical SAM superfamily 14 149 1.0E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_3289 fed65368294e02dc1a28e87bb22682ab 264 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 170 186 2.4E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_3289 fed65368294e02dc1a28e87bb22682ab 264 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 152 2.4E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_3289 fed65368294e02dc1a28e87bb22682ab 264 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 188 208 2.4E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_3289 fed65368294e02dc1a28e87bb22682ab 264 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 50 61 2.4E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_3289 fed65368294e02dc1a28e87bb22682ab 264 Gene3D G3DSA:3.40.50.1000 53 245 2.8E-44 T 14-10-2018 IPR023214 HAD superfamily Amir_3289 fed65368294e02dc1a28e87bb22682ab 264 Pfam PF13419 Haloacid dehalogenase-like hydrolase 53 225 3.3E-28 T 14-10-2018 Amir_3289 fed65368294e02dc1a28e87bb22682ab 264 SUPERFAMILY SSF56784 51 255 2.71E-52 T 14-10-2018 IPR036412 HAD-like superfamily Amir_3289 fed65368294e02dc1a28e87bb22682ab 264 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 131 221 1.5E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_3289 fed65368294e02dc1a28e87bb22682ab 264 Gene3D G3DSA:1.10.150.240 65 123 2.8E-44 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Amir_3289 fed65368294e02dc1a28e87bb22682ab 264 TIGRFAM TIGR01454 AHBA_synth_RP: AHBA synthesis associated protein 53 257 1.3E-118 T 14-10-2018 IPR006351 3-amino-5-hydroxybenzoic acid synthesis-related Amir_3289 fed65368294e02dc1a28e87bb22682ab 264 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 128 220 7.2E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_4794 0be9dbec9a7d526390eba66c5a424e95 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 55 5.4E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4794 0be9dbec9a7d526390eba66c5a424e95 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4794 0be9dbec9a7d526390eba66c5a424e95 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4794 0be9dbec9a7d526390eba66c5a424e95 187 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 55 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_4794 0be9dbec9a7d526390eba66c5a424e95 187 SUPERFAMILY SSF46689 3 79 4.73E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4794 0be9dbec9a7d526390eba66c5a424e95 187 Gene3D G3DSA:1.10.357.10 1 187 2.6E-44 T 14-10-2018 Amir_0840 77ef275d6be18061cea10c731a15045d 381 Pfam PF00486 Transcriptional regulatory protein, C terminal 305 367 6.6E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_0840 77ef275d6be18061cea10c731a15045d 381 Gene3D G3DSA:3.40.50.10090 19 265 4.4E-66 T 14-10-2018 Amir_0840 77ef275d6be18061cea10c731a15045d 381 Gene3D G3DSA:3.40.50.10090 45 183 4.4E-66 T 14-10-2018 Amir_0840 77ef275d6be18061cea10c731a15045d 381 SMART SM00862 298 367 2.7E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_0840 77ef275d6be18061cea10c731a15045d 381 Pfam PF02602 Uroporphyrinogen-III synthase HemD 26 266 2.5E-40 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amir_0840 77ef275d6be18061cea10c731a15045d 381 Gene3D G3DSA:1.10.10.10 279 373 3.8E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0840 77ef275d6be18061cea10c731a15045d 381 SUPERFAMILY SSF46894 283 369 3.4E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_0840 77ef275d6be18061cea10c731a15045d 381 SUPERFAMILY SSF69618 14 270 5.36E-55 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amir_2364 26454df8f7b81e25976ed33644a9a044 307 Gene3D G3DSA:3.90.25.10 169 299 5.8E-67 T 14-10-2018 Amir_2364 26454df8f7b81e25976ed33644a9a044 307 SUPERFAMILY SSF51735 23 277 1.62E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2364 26454df8f7b81e25976ed33644a9a044 307 Pfam PF05368 NmrA-like family 26 253 2.0E-49 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 Amir_2364 26454df8f7b81e25976ed33644a9a044 307 Gene3D G3DSA:3.40.50.720 26 292 5.8E-67 T 14-10-2018 Amir_0831 d2feae2e423f6f816882d0143c4c6261 344 SUPERFAMILY SSF53474 46 336 3.11E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0831 d2feae2e423f6f816882d0143c4c6261 344 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 115 1.4E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_0831 d2feae2e423f6f816882d0143c4c6261 344 PRINTS PR00111 Alpha/beta hydrolase fold signature 144 157 1.4E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_0831 d2feae2e423f6f816882d0143c4c6261 344 PRINTS PR00111 Alpha/beta hydrolase fold signature 158 171 1.4E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_0831 d2feae2e423f6f816882d0143c4c6261 344 Pfam PF00561 alpha/beta hydrolase fold 78 327 2.4E-25 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_0831 d2feae2e423f6f816882d0143c4c6261 344 Gene3D G3DSA:3.40.50.1820 45 340 1.0E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3468 d730c8515c5639b0d7ab51126aa17850 428 Gene3D G3DSA:3.40.630.10 1 195 6.5E-50 T 14-10-2018 Amir_3468 d730c8515c5639b0d7ab51126aa17850 428 Pfam PF07687 Peptidase dimerisation domain 189 324 2.6E-15 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Amir_3468 d730c8515c5639b0d7ab51126aa17850 428 PIRSF PIRSF036696 3 237 1.5E-32 T 14-10-2018 Amir_3468 d730c8515c5639b0d7ab51126aa17850 428 PIRSF PIRSF036696 265 410 3.6E-8 T 14-10-2018 Amir_3468 d730c8515c5639b0d7ab51126aa17850 428 SUPERFAMILY SSF55031 192 318 2.69E-11 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amir_3468 d730c8515c5639b0d7ab51126aa17850 428 Pfam PF01546 Peptidase family M20/M25/M40 73 427 1.2E-37 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Amir_3468 d730c8515c5639b0d7ab51126aa17850 428 SUPERFAMILY SSF53187 3 426 3.28E-55 T 14-10-2018 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 PIRSF PIRSF001100 2 323 1.9E-80 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 PIRSF PIRSF001100 312 438 4000.0 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 Gene3D G3DSA:3.20.20.40 34 320 1.9E-103 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 SMART SM00637 339 437 9.0E-28 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 Pfam PF00553 Cellulose binding domain 339 437 5.5E-22 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 PRINTS PR00733 Glycosyl hydrolase family 6 signature 99 112 6.9E-43 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 PRINTS PR00733 Glycosyl hydrolase family 6 signature 286 300 6.9E-43 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 PRINTS PR00733 Glycosyl hydrolase family 6 signature 56 75 6.9E-43 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 PRINTS PR00733 Glycosyl hydrolase family 6 signature 127 142 6.9E-43 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 PRINTS PR00733 Glycosyl hydrolase family 6 signature 215 225 6.9E-43 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 PRINTS PR00733 Glycosyl hydrolase family 6 signature 262 282 6.9E-43 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 PRINTS PR00733 Glycosyl hydrolase family 6 signature 247 260 6.9E-43 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 PRINTS PR00733 Glycosyl hydrolase family 6 signature 184 197 6.9E-43 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 Gene3D G3DSA:2.60.40.290 335 438 4.2E-27 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 SUPERFAMILY SSF51989 37 319 8.37E-85 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 SUPERFAMILY SSF49384 335 437 2.16E-24 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 ProSitePatterns PS00655 Glycosyl hydrolases family 6 signature 1. 104 120 - T 14-10-2018 IPR001524 Glycoside hydrolase, family 6, conserved site GO:0004553|GO:0005975 Amir_3215 af974e66ed9c4a95e549ac0e067f82b4 438 Pfam PF01341 Glycosyl hydrolases family 6 52 302 3.8E-64 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 Amir_6067 47db3c41800185890483c3ce8627dc7e 701 Gene3D G3DSA:2.60.40.10 3 140 1.8E-39 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_6067 47db3c41800185890483c3ce8627dc7e 701 SUPERFAMILY SSF51011 586 698 2.37E-18 T 14-10-2018 Amir_6067 47db3c41800185890483c3ce8627dc7e 701 Gene3D G3DSA:3.20.20.80 146 582 1.6E-169 T 14-10-2018 Amir_6067 47db3c41800185890483c3ce8627dc7e 701 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 14 100 6.1E-20 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Amir_6067 47db3c41800185890483c3ce8627dc7e 701 Gene3D G3DSA:2.60.40.1180 586 698 1.4E-12 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_6067 47db3c41800185890483c3ce8627dc7e 701 SMART SM00642 162 561 3.4E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_6067 47db3c41800185890483c3ce8627dc7e 701 Pfam PF00128 Alpha amylase, catalytic domain 195 276 3.9E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_6067 47db3c41800185890483c3ce8627dc7e 701 SUPERFAMILY SSF81296 10 122 1.04E-36 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_6067 47db3c41800185890483c3ce8627dc7e 701 SUPERFAMILY SSF51445 148 575 2.96E-127 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_6067 47db3c41800185890483c3ce8627dc7e 701 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 10 698 1.2E-261 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 Amir_6046 7431095ae862a7ba85321532bf6e23e0 391 SUPERFAMILY SSF53383 2 374 1.01E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_6046 7431095ae862a7ba85321532bf6e23e0 391 Gene3D G3DSA:3.90.1150.10 3 365 3.4E-137 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_6046 7431095ae862a7ba85321532bf6e23e0 391 Gene3D G3DSA:3.40.640.10 13 255 3.4E-137 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_6046 7431095ae862a7ba85321532bf6e23e0 391 PIRSF PIRSF005572 1 379 1.4E-114 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Amir_6046 7431095ae862a7ba85321532bf6e23e0 391 Pfam PF00266 Aminotransferase class-V 3 365 3.9E-62 T 14-10-2018 IPR000192 Aminotransferase class V domain Amir_1784 8818702ab1c0307a4549c0ae0582331e 1193 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 38 1186 0.0 T 14-10-2018 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 Amir_1784 8818702ab1c0307a4549c0ae0582331e 1193 Pfam PF02514 CobN/Magnesium Chelatase 99 1173 0.0 T 14-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 Amir_4051 bd8ad0d9ded0a9ac516bd8095b8281f4 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 203 6.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4051 bd8ad0d9ded0a9ac516bd8095b8281f4 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 175 6.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4051 bd8ad0d9ded0a9ac516bd8095b8281f4 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 191 6.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4051 bd8ad0d9ded0a9ac516bd8095b8281f4 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 215 2.5E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4051 bd8ad0d9ded0a9ac516bd8095b8281f4 225 SUPERFAMILY SSF52172 7 140 2.85E-32 T 14-10-2018 IPR011006 CheY-like superfamily Amir_4051 bd8ad0d9ded0a9ac516bd8095b8281f4 225 SMART SM00421 158 215 8.8E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4051 bd8ad0d9ded0a9ac516bd8095b8281f4 225 Gene3D G3DSA:3.40.50.12740 8 221 1.4E-68 T 14-10-2018 Amir_4051 bd8ad0d9ded0a9ac516bd8095b8281f4 225 SUPERFAMILY SSF46894 150 222 1.97E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4051 bd8ad0d9ded0a9ac516bd8095b8281f4 225 Pfam PF00072 Response regulator receiver domain 10 121 1.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4051 bd8ad0d9ded0a9ac516bd8095b8281f4 225 SMART SM00448 8 121 1.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0403 99343ec231836ce718372466c26a894b 426 Gene3D G3DSA:3.40.190.10 54 380 3.7E-86 T 14-10-2018 Amir_0403 99343ec231836ce718372466c26a894b 426 SUPERFAMILY SSF53850 19 424 1.18E-77 T 14-10-2018 Amir_0403 99343ec231836ce718372466c26a894b 426 Pfam PF01547 Bacterial extracellular solute-binding protein 49 341 1.7E-48 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_0403 99343ec231836ce718372466c26a894b 426 Gene3D G3DSA:3.40.190.10 149 418 3.7E-86 T 14-10-2018 Amir_5141 87d3938335de28dbd0800b68952c2d5b 938 SUPERFAMILY SSF49785 830 937 5.53E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5141 87d3938335de28dbd0800b68952c2d5b 938 Gene3D G3DSA:2.60.120.260 793 937 1.6E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_5141 87d3938335de28dbd0800b68952c2d5b 938 Pfam PF01483 Proprotein convertase P-domain 831 933 5.9E-8 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 Amir_5141 87d3938335de28dbd0800b68952c2d5b 938 SUPERFAMILY SSF52743 219 656 6.28E-32 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_5141 87d3938335de28dbd0800b68952c2d5b 938 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 594 604 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_5141 87d3938335de28dbd0800b68952c2d5b 938 Pfam PF00082 Subtilase family 281 644 1.0E-16 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_1502 e66661f375b15de521f4f5cfb58e982a 572 SUPERFAMILY SSF52540 126 377 2.13E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1502 e66661f375b15de521f4f5cfb58e982a 572 Pfam PF04851 Type III restriction enzyme, res subunit 12 164 2.2E-13 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Amir_1502 e66661f375b15de521f4f5cfb58e982a 572 Gene3D G3DSA:3.40.50.300 2 176 5.1E-20 T 14-10-2018 Amir_1502 e66661f375b15de521f4f5cfb58e982a 572 Gene3D G3DSA:3.40.50.300 192 378 4.1E-13 T 14-10-2018 Amir_1502 e66661f375b15de521f4f5cfb58e982a 572 SUPERFAMILY SSF52540 10 168 3.15E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1502 e66661f375b15de521f4f5cfb58e982a 572 SMART SM00487 8 185 2.2E-12 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_4463 3c96baa1c8ae91de1aa43903d5e298d0 219 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 91 3.5E-16 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Amir_4463 3c96baa1c8ae91de1aa43903d5e298d0 219 SUPERFAMILY SSF51735 3 193 2.88E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4463 3c96baa1c8ae91de1aa43903d5e298d0 219 Gene3D G3DSA:3.40.50.720 2 215 1.3E-47 T 14-10-2018 Amir_2741 234ada1e72f551e13ec4535eff914861 276 SUPERFAMILY SSF55729 122 231 1.04E-7 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_2741 234ada1e72f551e13ec4535eff914861 276 Gene3D G3DSA:3.40.630.30 121 250 1.9E-5 T 14-10-2018 Amir_6751 101dbc7c5ddb894932177231d3fb4bcd 275 PRINTS PR00069 Aldo-keto reductase signature 208 232 4.3E-9 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_6751 101dbc7c5ddb894932177231d3fb4bcd 275 PRINTS PR00069 Aldo-keto reductase signature 103 121 4.3E-9 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_6751 101dbc7c5ddb894932177231d3fb4bcd 275 PRINTS PR00069 Aldo-keto reductase signature 138 155 4.3E-9 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_6751 101dbc7c5ddb894932177231d3fb4bcd 275 PRINTS PR00069 Aldo-keto reductase signature 38 62 4.3E-9 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_6751 101dbc7c5ddb894932177231d3fb4bcd 275 Pfam PF00248 Aldo/keto reductase family 9 272 2.3E-42 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_6751 101dbc7c5ddb894932177231d3fb4bcd 275 Gene3D G3DSA:3.20.20.100 2 274 1.6E-62 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_6751 101dbc7c5ddb894932177231d3fb4bcd 275 SUPERFAMILY SSF51430 4 273 5.89E-59 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_2689 c3a8b44e6bd56930c5f09ec50b9e7bf8 507 Pfam PF00501 AMP-binding enzyme 19 415 5.2E-65 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_2689 c3a8b44e6bd56930c5f09ec50b9e7bf8 507 SUPERFAMILY SSF56801 8 506 2.62E-104 T 14-10-2018 Amir_2689 c3a8b44e6bd56930c5f09ec50b9e7bf8 507 Gene3D G3DSA:3.30.300.30 411 506 2.5E-20 T 14-10-2018 Amir_2689 c3a8b44e6bd56930c5f09ec50b9e7bf8 507 Gene3D G3DSA:3.40.50.12780 11 410 2.8E-94 T 14-10-2018 Amir_2689 c3a8b44e6bd56930c5f09ec50b9e7bf8 507 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_1127 6da26cc398798283ee0191ffee0853cf 558 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_1127 6da26cc398798283ee0191ffee0853cf 558 SUPERFAMILY SSF52540 8 241 4.26E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1127 6da26cc398798283ee0191ffee0853cf 558 Gene3D G3DSA:3.40.50.300 2 282 4.6E-73 T 14-10-2018 Amir_1127 6da26cc398798283ee0191ffee0853cf 558 SUPERFAMILY SSF52540 307 507 3.81E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1127 6da26cc398798283ee0191ffee0853cf 558 SMART SM00382 346 516 7.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1127 6da26cc398798283ee0191ffee0853cf 558 SMART SM00382 30 242 2.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1127 6da26cc398798283ee0191ffee0853cf 558 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 555 1.3E-267 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 Amir_1127 6da26cc398798283ee0191ffee0853cf 558 Pfam PF00005 ABC transporter 338 471 1.2E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1127 6da26cc398798283ee0191ffee0853cf 558 Pfam PF00005 ABC transporter 21 188 8.2E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1127 6da26cc398798283ee0191ffee0853cf 558 Gene3D G3DSA:3.40.50.300 283 556 3.5E-63 T 14-10-2018 Amir_1127 6da26cc398798283ee0191ffee0853cf 558 Pfam PF12848 ABC transporter 227 306 1.5E-15 T 14-10-2018 IPR032781 ABC-transporter extension domain Amir_1127 6da26cc398798283ee0191ffee0853cf 558 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0838 470f89f3550bc696202fa03c162745df 834 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 288 2.9E-47 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_0838 470f89f3550bc696202fa03c162745df 834 Gene3D G3DSA:3.50.50.60 105 251 1.3E-80 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0838 470f89f3550bc696202fa03c162745df 834 Gene3D G3DSA:3.50.50.60 7 288 1.3E-80 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0838 470f89f3550bc696202fa03c162745df 834 SUPERFAMILY SSF55124 499 633 1.32E-24 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_0838 470f89f3550bc696202fa03c162745df 834 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 671 687 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_0838 470f89f3550bc696202fa03c162745df 834 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 5 793 0.0 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 Amir_0838 470f89f3550bc696202fa03c162745df 834 PRINTS PR00397 Sirohaem Fe-binding site signature 628 646 5.3E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_0838 470f89f3550bc696202fa03c162745df 834 PRINTS PR00397 Sirohaem Fe-binding site signature 671 689 5.3E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_0838 470f89f3550bc696202fa03c162745df 834 Gene3D G3DSA:1.10.10.1100 418 472 3.5E-10 T 14-10-2018 Amir_0838 470f89f3550bc696202fa03c162745df 834 Pfam PF04324 BFD-like [2Fe-2S] binding domain 419 468 2.3E-14 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Amir_0838 470f89f3550bc696202fa03c162745df 834 SUPERFAMILY SSF51905 3 314 2.69E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0838 470f89f3550bc696202fa03c162745df 834 Gene3D G3DSA:3.30.413.10 623 783 1.5E-34 T 14-10-2018 Amir_0838 470f89f3550bc696202fa03c162745df 834 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.7E-6 T 14-10-2018 Amir_0838 470f89f3550bc696202fa03c162745df 834 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 281 288 3.7E-6 T 14-10-2018 Amir_0838 470f89f3550bc696202fa03c162745df 834 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 179 3.7E-6 T 14-10-2018 Amir_0838 470f89f3550bc696202fa03c162745df 834 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 240 254 3.7E-6 T 14-10-2018 Amir_0838 470f89f3550bc696202fa03c162745df 834 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 4.0E-17 T 14-10-2018 Amir_0838 470f89f3550bc696202fa03c162745df 834 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 4.0E-17 T 14-10-2018 Amir_0838 470f89f3550bc696202fa03c162745df 834 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 97 115 4.0E-17 T 14-10-2018 Amir_0838 470f89f3550bc696202fa03c162745df 834 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 4.0E-17 T 14-10-2018 Amir_0838 470f89f3550bc696202fa03c162745df 834 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 4.0E-17 T 14-10-2018 Amir_0838 470f89f3550bc696202fa03c162745df 834 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 552 613 1.6E-10 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_0838 470f89f3550bc696202fa03c162745df 834 SUPERFAMILY SSF56014 625 799 3.27E-50 T 14-10-2018 Amir_0838 470f89f3550bc696202fa03c162745df 834 PIRSF PIRSF037149 1 827 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 Amir_0838 470f89f3550bc696202fa03c162745df 834 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 624 760 1.1E-19 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_1450 b78c12837a0c40a5f197b5d28ca5f9f4 215 Gene3D G3DSA:1.10.3720.10 1 213 5.8E-43 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1450 b78c12837a0c40a5f197b5d28ca5f9f4 215 SUPERFAMILY SSF161098 9 197 1.18E-36 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1450 b78c12837a0c40a5f197b5d28ca5f9f4 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 211 3.0E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_1450 b78c12837a0c40a5f197b5d28ca5f9f4 215 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 106 7.4E-21 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Amir_3417 daeb93a546406d0ff659ac81370aecae 286 PIRSF PIRSF006493 1 286 4.9E-61 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Amir_3417 daeb93a546406d0ff659ac81370aecae 286 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 1 279 28.604 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Amir_3417 daeb93a546406d0ff659ac81370aecae 286 SUPERFAMILY SSF100939 1 226 3.92E-36 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily Amir_3417 daeb93a546406d0ff659ac81370aecae 286 Gene3D G3DSA:2.40.290.10 3 175 2.3E-7 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily Amir_3417 daeb93a546406d0ff659ac81370aecae 286 SMART SM00559 52 179 3.7E-18 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 Amir_3417 daeb93a546406d0ff659ac81370aecae 286 Pfam PF02735 Ku70/Ku80 beta-barrel domain 12 174 1.9E-22 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 Amir_3529 e4f6a69cabbd1aa707b9f21746c97316 159 SUPERFAMILY SSF55729 5 135 3.19E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_3529 e4f6a69cabbd1aa707b9f21746c97316 159 Pfam PF13302 Acetyltransferase (GNAT) domain 11 130 6.1E-10 T 14-10-2018 IPR000182 GNAT domain Amir_3529 e4f6a69cabbd1aa707b9f21746c97316 159 Gene3D G3DSA:3.40.630.30 6 149 1.1E-17 T 14-10-2018 Amir_3677 627a1d6ce0584827663b5399ba022ce8 575 Gene3D G3DSA:3.90.550.10 71 324 5.8E-9 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_3677 627a1d6ce0584827663b5399ba022ce8 575 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 441 557 4.6E-12 T 14-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 Amir_3677 627a1d6ce0584827663b5399ba022ce8 575 SUPERFAMILY SSF53448 93 299 5.25E-15 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_3677 627a1d6ce0584827663b5399ba022ce8 575 Gene3D G3DSA:2.60.120.330 390 566 1.2E-22 T 14-10-2018 IPR027443 Isopenicillin N synthase-like Amir_5917 6cb5dd72babf3f5348ed46f3e8aa0c22 117 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 114 18.337 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 Amir_5917 6cb5dd72babf3f5348ed46f3e8aa0c22 117 Pfam PF02021 Uncharacterised protein family UPF0102 11 100 5.0E-23 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 Amir_5917 6cb5dd72babf3f5348ed46f3e8aa0c22 117 Gene3D G3DSA:3.40.1350.10 11 115 2.9E-24 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Amir_5917 6cb5dd72babf3f5348ed46f3e8aa0c22 117 SUPERFAMILY SSF52980 5 111 3.43E-18 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Amir_2723 c3755d9323ce8b8e19512ab19265e5ba 340 SUPERFAMILY SSF53807 47 322 3.06E-35 T 14-10-2018 Amir_2723 c3755d9323ce8b8e19512ab19265e5ba 340 Gene3D G3DSA:3.40.50.1980 34 177 8.2E-21 T 14-10-2018 Amir_2723 c3755d9323ce8b8e19512ab19265e5ba 340 Gene3D G3DSA:3.40.50.1980 179 338 6.3E-16 T 14-10-2018 Amir_2723 c3755d9323ce8b8e19512ab19265e5ba 340 Pfam PF01497 Periplasmic binding protein 73 310 6.6E-17 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Amir_0198 523c05e721e3c5566b67dc9021fdbd2b 715 Pfam PF17201 Cache 3/Cache 2 fusion domain 46 371 5.1E-81 T 14-10-2018 IPR033462 Cache 3/Cache 2 fusion domain Amir_0198 523c05e721e3c5566b67dc9021fdbd2b 715 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 521 685 1.3E-29 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_0198 523c05e721e3c5566b67dc9021fdbd2b 715 Gene3D G3DSA:1.10.287.950 400 715 7.9E-59 T 14-10-2018 Amir_0198 523c05e721e3c5566b67dc9021fdbd2b 715 SMART SM00283 460 714 5.6E-50 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_0198 523c05e721e3c5566b67dc9021fdbd2b 715 Gene3D G3DSA:3.30.450.20 222 377 5.0E-6 T 14-10-2018 Amir_0198 523c05e721e3c5566b67dc9021fdbd2b 715 Pfam PF00672 HAMP domain 400 449 2.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_0198 523c05e721e3c5566b67dc9021fdbd2b 715 SMART SM00304 400 452 5.0E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_0198 523c05e721e3c5566b67dc9021fdbd2b 715 SUPERFAMILY SSF58104 420 713 4.84E-60 T 14-10-2018 Amir_0198 523c05e721e3c5566b67dc9021fdbd2b 715 SUPERFAMILY SSF103190 135 248 2.59E-14 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amir_3873 ce725bcc5097e555a7d844653e374a04 439 Gene3D G3DSA:1.10.443.10 168 419 5.0E-31 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amir_3873 ce725bcc5097e555a7d844653e374a04 439 SUPERFAMILY SSF56349 345 422 1.65E-15 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amir_3873 ce725bcc5097e555a7d844653e374a04 439 SUPERFAMILY SSF56349 78 287 7.74E-30 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amir_3873 ce725bcc5097e555a7d844653e374a04 439 Gene3D G3DSA:1.10.150.130 63 167 5.0E-18 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Amir_3873 ce725bcc5097e555a7d844653e374a04 439 Pfam PF00589 Phage integrase family 356 415 8.5E-13 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amir_0719 d90c80b3adccc76b32ae2966d7a5753d 537 Gene3D G3DSA:1.10.3260.10 1 187 6.4E-39 T 14-10-2018 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily GO:0003677|GO:0003910|GO:0006281|GO:0006310 Amir_0719 d90c80b3adccc76b32ae2966d7a5753d 537 Pfam PF01068 ATP dependent DNA ligase domain 191 378 1.0E-38 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Amir_0719 d90c80b3adccc76b32ae2966d7a5753d 537 SUPERFAMILY SSF56091 185 378 1.13E-45 T 14-10-2018 Amir_0719 d90c80b3adccc76b32ae2966d7a5753d 537 Gene3D G3DSA:3.30.470.30 188 378 1.0E-49 T 14-10-2018 Amir_0719 d90c80b3adccc76b32ae2966d7a5753d 537 Gene3D G3DSA:2.40.50.140 379 509 1.7E-29 T 14-10-2018 Amir_0719 d90c80b3adccc76b32ae2966d7a5753d 537 Pfam PF04679 ATP dependent DNA ligase C terminal region 398 489 2.5E-9 T 14-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Amir_0719 d90c80b3adccc76b32ae2966d7a5753d 537 Hamap MF_00407 DNA ligase [lig]. 1 505 25.852 T 14-10-2018 IPR022865 DNA ligase, ATP-dependent, bacterial/archaeal GO:0003910 Amir_0719 d90c80b3adccc76b32ae2966d7a5753d 537 TIGRFAM TIGR00574 dnl1: DNA ligase I, ATP-dependent (dnl1) 72 503 6.3E-74 T 14-10-2018 IPR000977 DNA ligase, ATP-dependent GO:0003910|GO:0005524|GO:0006281|GO:0006310|GO:0071897 Amir_0719 d90c80b3adccc76b32ae2966d7a5753d 537 Pfam PF04675 DNA ligase N terminus 69 143 4.2E-8 T 14-10-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 Amir_0719 d90c80b3adccc76b32ae2966d7a5753d 537 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 213 221 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Amir_0719 d90c80b3adccc76b32ae2966d7a5753d 537 SUPERFAMILY SSF50249 380 504 1.29E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_0719 d90c80b3adccc76b32ae2966d7a5753d 537 SUPERFAMILY SSF117018 1 204 5.1E-27 T 14-10-2018 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily GO:0003677|GO:0003910|GO:0006281|GO:0006310 Amir_2298 d57d64bd37ae2a314af9e38533c6fba9 389 SUPERFAMILY SSF46785 6 68 1.01E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2298 d57d64bd37ae2a314af9e38533c6fba9 389 Gene3D G3DSA:3.30.420.40 196 369 8.4E-88 T 14-10-2018 Amir_2298 d57d64bd37ae2a314af9e38533c6fba9 389 Gene3D G3DSA:3.30.420.40 80 379 8.4E-88 T 14-10-2018 Amir_2298 d57d64bd37ae2a314af9e38533c6fba9 389 SUPERFAMILY SSF53067 75 385 7.26E-56 T 14-10-2018 Amir_2298 d57d64bd37ae2a314af9e38533c6fba9 389 Pfam PF00480 ROK family 76 383 3.1E-58 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_2298 d57d64bd37ae2a314af9e38533c6fba9 389 ProSitePatterns PS01125 ROK family signature. 206 233 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_2298 d57d64bd37ae2a314af9e38533c6fba9 389 Gene3D G3DSA:1.10.10.10 5 70 4.1E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3520 c72268b733c9c7ac0c930c182e8e1934 121 SUPERFAMILY SSF54593 5 120 1.07E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_3520 c72268b733c9c7ac0c930c182e8e1934 121 Gene3D G3DSA:3.10.180.10 1 121 7.3E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_3439 cb4c6c3722d29c7c1afe6a9bf0c86e71 86 SMART SM00530 20 74 1.3E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_3439 cb4c6c3722d29c7c1afe6a9bf0c86e71 86 Gene3D G3DSA:1.10.260.40 7 75 2.6E-32 T 14-10-2018 Amir_3439 cb4c6c3722d29c7c1afe6a9bf0c86e71 86 SUPERFAMILY SSF47413 11 76 1.3E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3439 cb4c6c3722d29c7c1afe6a9bf0c86e71 86 Pfam PF13560 Helix-turn-helix domain 16 76 1.2E-12 T 14-10-2018 Amir_4417 25d162f74f8276ab6a8bae1f0b0cd307 490 Gene3D G3DSA:2.40.180.10 9 487 1.7E-215 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Amir_4417 25d162f74f8276ab6a8bae1f0b0cd307 490 SMART SM01060 13 399 3.3E-279 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_4417 25d162f74f8276ab6a8bae1f0b0cd307 490 PIRSF PIRSF038928 3 489 2.9E-216 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_4417 25d162f74f8276ab6a8bae1f0b0cd307 490 SUPERFAMILY SSF56634 6 484 5.76E-202 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_4417 25d162f74f8276ab6a8bae1f0b0cd307 490 ProSitePatterns PS00438 Catalase proximal active site signature. 49 65 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_4417 25d162f74f8276ab6a8bae1f0b0cd307 490 PRINTS PR00067 Catalase signature 129 147 2.4E-71 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_4417 25d162f74f8276ab6a8bae1f0b0cd307 490 PRINTS PR00067 Catalase signature 110 127 2.4E-71 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_4417 25d162f74f8276ab6a8bae1f0b0cd307 490 PRINTS PR00067 Catalase signature 326 352 2.4E-71 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_4417 25d162f74f8276ab6a8bae1f0b0cd307 490 PRINTS PR00067 Catalase signature 26 49 2.4E-71 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_4417 25d162f74f8276ab6a8bae1f0b0cd307 490 PRINTS PR00067 Catalase signature 89 107 2.4E-71 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_4417 25d162f74f8276ab6a8bae1f0b0cd307 490 PRINTS PR00067 Catalase signature 294 321 2.4E-71 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_4417 25d162f74f8276ab6a8bae1f0b0cd307 490 Pfam PF06628 Catalase-related immune-responsive 423 483 1.7E-16 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_4417 25d162f74f8276ab6a8bae1f0b0cd307 490 Pfam PF00199 Catalase 13 395 4.6E-183 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amir_4487 971559b8aed64934e3a3144968a9adec 385 Gene3D G3DSA:3.50.50.60 1 378 4.1E-67 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4487 971559b8aed64934e3a3144968a9adec 385 SUPERFAMILY SSF51905 2 346 1.07E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4487 971559b8aed64934e3a3144968a9adec 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 6.2E-7 T 14-10-2018 Amir_4487 971559b8aed64934e3a3144968a9adec 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 6.2E-7 T 14-10-2018 Amir_4487 971559b8aed64934e3a3144968a9adec 385 Pfam PF01494 FAD binding domain 3 295 1.5E-21 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_6608 d2953c0b2744fdbb9dd53539abb96709 275 Pfam PF07650 KH domain 37 109 5.6E-19 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6608 d2953c0b2744fdbb9dd53539abb96709 275 SMART SM00322 59 124 2.0E-7 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Amir_6608 d2953c0b2744fdbb9dd53539abb96709 275 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6608 d2953c0b2744fdbb9dd53539abb96709 275 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 37.909 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Amir_6608 d2953c0b2744fdbb9dd53539abb96709 275 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 202 1.5E-35 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6608 d2953c0b2744fdbb9dd53539abb96709 275 SUPERFAMILY SSF54821 106 206 5.62E-36 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6608 d2953c0b2744fdbb9dd53539abb96709 275 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 6.0E-93 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Amir_6608 d2953c0b2744fdbb9dd53539abb96709 275 Gene3D G3DSA:3.30.300.20 17 106 4.9E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Amir_6608 d2953c0b2744fdbb9dd53539abb96709 275 SUPERFAMILY SSF54814 2 105 4.45E-37 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Amir_6608 d2953c0b2744fdbb9dd53539abb96709 275 Gene3D G3DSA:3.30.1140.32 107 208 3.0E-38 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_1069 32204b131666695f3fe6139344f3c72d 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 199 23.685 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 Amir_1069 32204b131666695f3fe6139344f3c72d 201 Gene3D G3DSA:3.40.50.360 1 201 4.9E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Amir_1069 32204b131666695f3fe6139344f3c72d 201 SUPERFAMILY SSF52218 3 186 1.01E-35 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Amir_1069 32204b131666695f3fe6139344f3c72d 201 Pfam PF02525 Flavodoxin-like fold 2 172 2.1E-34 T 14-10-2018 IPR003680 Flavodoxin-like fold Amir_0399 c55a44de586f82624178b7ba17fb5c36 224 Pfam PF07729 FCD domain 93 214 1.9E-25 T 14-10-2018 IPR011711 GntR, C-terminal Amir_0399 c55a44de586f82624178b7ba17fb5c36 224 Gene3D G3DSA:1.20.120.530 89 224 1.1E-30 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_0399 c55a44de586f82624178b7ba17fb5c36 224 SUPERFAMILY SSF46785 9 70 1.06E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0399 c55a44de586f82624178b7ba17fb5c36 224 SMART SM00895 93 215 9.9E-22 T 14-10-2018 IPR011711 GntR, C-terminal Amir_0399 c55a44de586f82624178b7ba17fb5c36 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 66 4.5E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_0399 c55a44de586f82624178b7ba17fb5c36 224 Gene3D G3DSA:1.10.10.10 3 70 9.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0399 c55a44de586f82624178b7ba17fb5c36 224 SMART SM00345 7 66 1.7E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_0399 c55a44de586f82624178b7ba17fb5c36 224 SUPERFAMILY SSF48008 89 220 1.33E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_1047 54022aa07ca25bbc41e1ec5741d377aa 1028 Gene3D G3DSA:1.20.120.850 792 1014 1.3E-88 T 14-10-2018 Amir_1047 54022aa07ca25bbc41e1ec5741d377aa 1028 Pfam PF00176 SNF2 family N-terminal domain 574 837 1.7E-54 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Amir_1047 54022aa07ca25bbc41e1ec5741d377aa 1028 SUPERFAMILY SSF52540 546 768 1.57E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1047 54022aa07ca25bbc41e1ec5741d377aa 1028 Gene3D G3DSA:3.40.50.10810 558 769 1.0E-65 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Amir_1047 54022aa07ca25bbc41e1ec5741d377aa 1028 Pfam PF12419 SNF2 Helicase protein 292 452 6.4E-40 T 14-10-2018 IPR022138 Helicase SWF/SNF-related Amir_1047 54022aa07ca25bbc41e1ec5741d377aa 1028 SMART SM00490 881 965 4.9E-20 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_1047 54022aa07ca25bbc41e1ec5741d377aa 1028 Pfam PF00271 Helicase conserved C-terminal domain 854 965 8.6E-15 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_1047 54022aa07ca25bbc41e1ec5741d377aa 1028 SMART SM00487 553 740 9.6E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_1047 54022aa07ca25bbc41e1ec5741d377aa 1028 Gene3D G3DSA:3.40.50.300 777 979 1.3E-88 T 14-10-2018 Amir_1047 54022aa07ca25bbc41e1ec5741d377aa 1028 SUPERFAMILY SSF52540 772 1022 1.61E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3812 5d76623dd1e888ed7b88e69190e63dea 325 Gene3D G3DSA:2.102.10.10 41 146 2.4E-18 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Amir_3812 5d76623dd1e888ed7b88e69190e63dea 325 SUPERFAMILY SSF50022 39 137 1.44E-21 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Amir_3812 5d76623dd1e888ed7b88e69190e63dea 325 Pfam PF00355 Rieske [2Fe-2S] domain 44 111 1.5E-13 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Amir_3573 70ce3e97650d51d20a47edae1740532c 189 SUPERFAMILY SSF46894 118 189 4.76E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_3573 70ce3e97650d51d20a47edae1740532c 189 SMART SM00421 126 183 5.3E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3573 70ce3e97650d51d20a47edae1740532c 189 Gene3D G3DSA:3.40.50.12740 51 189 1.2E-19 T 14-10-2018 Amir_3573 70ce3e97650d51d20a47edae1740532c 189 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 159 4.7E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3573 70ce3e97650d51d20a47edae1740532c 189 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 171 4.7E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3573 70ce3e97650d51d20a47edae1740532c 189 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 129 143 4.7E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3573 70ce3e97650d51d20a47edae1740532c 189 Pfam PF00196 Bacterial regulatory proteins, luxR family 128 183 8.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0514 607c46489a0d846c5f1d33d77c33b996 377 TIGRFAM TIGR01366 serC_3: putative phosphoserine aminotransferase 17 376 3.0E-197 T 14-10-2018 IPR006272 Phosphoserine aminotransferase, Mycobacterial-type GO:0004648|GO:0006564|GO:0009058 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52 Amir_0514 607c46489a0d846c5f1d33d77c33b996 377 Gene3D G3DSA:3.90.1150.10 273 377 5.7E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_0514 607c46489a0d846c5f1d33d77c33b996 377 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 11 377 24.111 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Amir_0514 607c46489a0d846c5f1d33d77c33b996 377 SUPERFAMILY SSF53383 21 374 7.5E-76 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_0514 607c46489a0d846c5f1d33d77c33b996 377 Pfam PF00266 Aminotransferase class-V 26 336 6.2E-15 T 14-10-2018 IPR000192 Aminotransferase class V domain Amir_0514 607c46489a0d846c5f1d33d77c33b996 377 PIRSF PIRSF000525 10 377 7.1E-76 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Amir_0514 607c46489a0d846c5f1d33d77c33b996 377 Gene3D G3DSA:3.40.640.10 33 271 7.0E-59 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_5910 5e9bf3539d4c35a63a05fc6098a3042b 271 Gene3D G3DSA:1.10.286.20 189 235 3.2E-37 T 14-10-2018 Amir_5910 5e9bf3539d4c35a63a05fc6098a3042b 271 Pfam PF00889 Elongation factor TS 67 270 2.2E-61 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Amir_5910 5e9bf3539d4c35a63a05fc6098a3042b 271 SUPERFAMILY SSF54713 58 269 4.58E-41 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Amir_5910 5e9bf3539d4c35a63a05fc6098a3042b 271 SUPERFAMILY SSF46934 3 56 3.32E-16 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 Amir_5910 5e9bf3539d4c35a63a05fc6098a3042b 271 Gene3D G3DSA:3.30.479.20 159 269 3.2E-37 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Amir_5910 5e9bf3539d4c35a63a05fc6098a3042b 271 Gene3D G3DSA:1.10.8.10 1 56 7.5E-24 T 14-10-2018 Amir_5910 5e9bf3539d4c35a63a05fc6098a3042b 271 Gene3D G3DSA:3.30.479.20 57 143 4.8E-18 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Amir_5910 5e9bf3539d4c35a63a05fc6098a3042b 271 Hamap MF_00050 Elongation factor Ts [tsf]. 1 271 65.338 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amir_5910 5e9bf3539d4c35a63a05fc6098a3042b 271 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 270 8.4E-78 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amir_4576 7cb2e06cb0b5f919415b63d4872a9dfd 364 Gene3D G3DSA:3.40.50.1820 4 338 6.9E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4576 7cb2e06cb0b5f919415b63d4872a9dfd 364 SUPERFAMILY SSF53474 67 336 3.98E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4576 7cb2e06cb0b5f919415b63d4872a9dfd 364 Pfam PF12146 Serine aminopeptidase, S33 93 183 5.0E-10 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Amir_6905 97730c3a02ff4fb10e469baaab2b8854 682 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 161 590 2.3E-57 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Amir_6905 97730c3a02ff4fb10e469baaab2b8854 682 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 62 679 4.4E-131 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ Amir_4250 f2b485448ffe3fddf740deea5aa94685 609 SMART SM00382 292 436 0.84 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4250 f2b485448ffe3fddf740deea5aa94685 609 SMART SM00382 33 172 1.7 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4250 f2b485448ffe3fddf740deea5aa94685 609 SUPERFAMILY SSF52540 39 218 2.54E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4250 f2b485448ffe3fddf740deea5aa94685 609 Gene3D G3DSA:3.40.50.300 22 186 7.7E-6 T 14-10-2018 Amir_4250 f2b485448ffe3fddf740deea5aa94685 609 Gene3D G3DSA:3.40.50.300 279 436 1.4E-8 T 14-10-2018 Amir_4250 f2b485448ffe3fddf740deea5aa94685 609 SUPERFAMILY SSF52540 280 474 3.55E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4250 f2b485448ffe3fddf740deea5aa94685 609 Pfam PF07728 AAA domain (dynein-related subfamily) 296 385 2.3E-5 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Amir_4646 3c8b2b5a53fc9da584a560bbb0397e93 366 TIGRFAM TIGR03451 mycoS_dep_FDH: S-(hydroxymethyl)mycothiol dehydrogenase 4 361 2.2E-166 T 14-10-2018 IPR017816 S-(hydroxymethyl)mycothiol dehydrogenase MetaCyc: PWY-7908 Amir_4646 3c8b2b5a53fc9da584a560bbb0397e93 366 SUPERFAMILY SSF51735 153 328 5.65E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4646 3c8b2b5a53fc9da584a560bbb0397e93 366 SUPERFAMILY SSF50129 4 186 4.41E-51 T 14-10-2018 IPR011032 GroES-like superfamily Amir_4646 3c8b2b5a53fc9da584a560bbb0397e93 366 Gene3D G3DSA:3.40.50.720 167 305 1.6E-106 T 14-10-2018 Amir_4646 3c8b2b5a53fc9da584a560bbb0397e93 366 Gene3D G3DSA:3.90.180.10 13 359 1.6E-106 T 14-10-2018 Amir_4646 3c8b2b5a53fc9da584a560bbb0397e93 366 Pfam PF00107 Zinc-binding dehydrogenase 190 323 5.5E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_4646 3c8b2b5a53fc9da584a560bbb0397e93 366 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 146 1.1E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_4646 3c8b2b5a53fc9da584a560bbb0397e93 366 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amir_4646 3c8b2b5a53fc9da584a560bbb0397e93 366 SUPERFAMILY SSF50129 311 361 4.66E-5 T 14-10-2018 IPR011032 GroES-like superfamily Amir_4646 3c8b2b5a53fc9da584a560bbb0397e93 366 SMART SM00829 13 360 3.8E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_3044 bcf517b3eb162b382f470df3c6476feb 358 Gene3D G3DSA:3.40.50.2300 57 342 1.0E-124 T 14-10-2018 Amir_3044 bcf517b3eb162b382f470df3c6476feb 358 Gene3D G3DSA:3.40.50.2300 158 358 1.0E-124 T 14-10-2018 Amir_3044 bcf517b3eb162b382f470df3c6476feb 358 Pfam PF13407 Periplasmic binding protein domain 59 315 1.3E-51 T 14-10-2018 IPR025997 Periplasmic binding protein Amir_3044 bcf517b3eb162b382f470df3c6476feb 358 TIGRFAM TIGR02637 RhaS: rhamnose ABC transporter, rhamnose-binding protein 59 358 1.1E-113 T 14-10-2018 IPR013459 Rhamnose ABC transporter, substrate-binding protein RhaS GO:0015762 Amir_3044 bcf517b3eb162b382f470df3c6476feb 358 SUPERFAMILY SSF53822 56 358 2.36E-60 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_6761 d46668f1692857e2dcebfb1fb6d897c2 350 SUPERFAMILY SSF56176 3 181 7.01E-35 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amir_6761 d46668f1692857e2dcebfb1fb6d897c2 350 Gene3D G3DSA:3.90.78.10 227 350 8.3E-33 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_6761 d46668f1692857e2dcebfb1fb6d897c2 350 Gene3D G3DSA:3.30.43.10 1 67 6.0E-17 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Amir_6761 d46668f1692857e2dcebfb1fb6d897c2 350 SUPERFAMILY SSF56194 208 348 2.09E-29 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_6761 d46668f1692857e2dcebfb1fb6d897c2 350 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 3 346 5.7E-46 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_6761 d46668f1692857e2dcebfb1fb6d897c2 350 Gene3D G3DSA:3.30.465.10 74 220 3.5E-40 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amir_6761 d46668f1692857e2dcebfb1fb6d897c2 350 Pfam PF01565 FAD binding domain 15 146 1.4E-20 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Amir_6761 d46668f1692857e2dcebfb1fb6d897c2 350 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 350 74.214 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_6761 d46668f1692857e2dcebfb1fb6d897c2 350 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 346 2.3E-35 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_5218 95443a27bfd1446661370965c2f60154 417 SUPERFAMILY SSF142695 209 380 4.58E-70 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Amir_5218 95443a27bfd1446661370965c2f60154 417 Gene3D G3DSA:3.40.50.10990 209 381 1.3E-74 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Amir_5218 95443a27bfd1446661370965c2f60154 417 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 210 400 1.0E-73 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Amir_5218 95443a27bfd1446661370965c2f60154 417 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 202 6.7E-75 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amir_5218 95443a27bfd1446661370965c2f60154 417 Gene3D G3DSA:3.90.870.10 1 208 9.6E-89 T 14-10-2018 Amir_5218 95443a27bfd1446661370965c2f60154 417 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 3 399 55.375 T 14-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Amir_5218 95443a27bfd1446661370965c2f60154 417 Pfam PF00925 GTP cyclohydrolase II 211 377 5.7E-72 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Amir_5218 95443a27bfd1446661370965c2f60154 417 SUPERFAMILY SSF55821 4 208 4.35E-80 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Amir_5218 95443a27bfd1446661370965c2f60154 417 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 201 1.3E-84 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amir_5218 95443a27bfd1446661370965c2f60154 417 PIRSF PIRSF001259 2 410 3.7E-179 T 14-10-2018 Amir_5218 95443a27bfd1446661370965c2f60154 417 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 2 206 37.827 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amir_5218 95443a27bfd1446661370965c2f60154 417 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 207 403 40.71 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Amir_2005 b9ac0082d7c215b462a97e3b40da0fe8 521 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 20 514 1.1E-215 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Amir_2005 b9ac0082d7c215b462a97e3b40da0fe8 521 PIRSF PIRSF001363 1 518 9.1E-218 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Amir_2005 b9ac0082d7c215b462a97e3b40da0fe8 521 ProSitePatterns PS00510 Malate synthase signature. 263 278 - T 14-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Amir_2005 b9ac0082d7c215b462a97e3b40da0fe8 521 Gene3D G3DSA:3.20.20.360 4 401 6.6E-182 T 14-10-2018 Amir_2005 b9ac0082d7c215b462a97e3b40da0fe8 521 Pfam PF01274 Malate synthase 9 514 1.2E-177 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Amir_2005 b9ac0082d7c215b462a97e3b40da0fe8 521 Gene3D G3DSA:1.20.1220.12 405 515 7.2E-34 T 14-10-2018 Amir_2005 b9ac0082d7c215b462a97e3b40da0fe8 521 SUPERFAMILY SSF51645 6 516 7.32E-169 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Amir_6074 90673b4b93b5aeccc1ac7c526aecc479 442 SUPERFAMILY SSF56112 116 406 3.06E-15 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_6074 90673b4b93b5aeccc1ac7c526aecc479 442 Gene3D G3DSA:3.90.1200.10 191 439 4.7E-88 T 14-10-2018 Amir_2350 5d0ab15e37060dfc5dd0d8091c7affa2 118 Pfam PF00460 Flagella basal body rod protein 13 36 1.5E-4 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Amir_2350 5d0ab15e37060dfc5dd0d8091c7affa2 118 PIRSF PIRSF002889 3 118 3.8E-20 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Amir_2350 5d0ab15e37060dfc5dd0d8091c7affa2 118 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 10 116 4.4E-21 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Amir_0507 088bdceb3dd3778a39e3c55d556431d4 103 Gene3D G3DSA:2.10.150.10 1 103 3.7E-43 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0507 088bdceb3dd3778a39e3c55d556431d4 103 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 2 100 2.6E-34 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0507 088bdceb3dd3778a39e3c55d556431d4 103 Pfam PF00699 Urease beta subunit 3 98 4.0E-40 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0507 088bdceb3dd3778a39e3c55d556431d4 103 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 28.85 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0507 088bdceb3dd3778a39e3c55d556431d4 103 SUPERFAMILY SSF51278 2 102 1.57E-43 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_1816 429f15da248a9d8ac863a16ba9fa2d42 95 Pfam PF02467 Transcription factor WhiB 17 87 1.4E-23 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain Amir_1816 429f15da248a9d8ac863a16ba9fa2d42 95 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 93 18.553 T 14-10-2018 IPR003482 Transcription factor WhiB Amir_5485 af7b2fc861e7578c719d4df2a96ce47c 394 Pfam PF01757 Acyltransferase family 8 316 2.8E-16 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Amir_4674 6c35b27fd4247065e274763835af2f7c 334 SUPERFAMILY SSF52266 145 331 7.61E-30 T 14-10-2018 Amir_4674 6c35b27fd4247065e274763835af2f7c 334 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 152 321 5.2E-22 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_4674 6c35b27fd4247065e274763835af2f7c 334 Gene3D G3DSA:3.40.50.1110 147 334 4.0E-44 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_4674 6c35b27fd4247065e274763835af2f7c 334 Gene3D G3DSA:2.60.120.260 22 144 2.4E-14 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_2039 5ba54e56ec1ac6c385f4623c0dc79cc3 511 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 485 2.7E-229 T 14-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Amir_2039 5ba54e56ec1ac6c385f4623c0dc79cc3 511 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 357 437 6.6E-26 T 14-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Amir_2039 5ba54e56ec1ac6c385f4623c0dc79cc3 511 Gene3D G3DSA:1.10.3650.10 357 436 3.2E-21 T 14-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Amir_2039 5ba54e56ec1ac6c385f4623c0dc79cc3 511 SUPERFAMILY SSF54862 1 485 4.19E-156 T 14-10-2018 Amir_2039 5ba54e56ec1ac6c385f4623c0dc79cc3 511 Pfam PF13247 4Fe-4S dicluster domain 174 269 2.4E-35 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amir_2039 5ba54e56ec1ac6c385f4623c0dc79cc3 511 Gene3D G3DSA:3.30.70.20 1 286 1.7E-97 T 14-10-2018 Amir_2872 ae8b50ca9314ea2ab79e663d8fb2a364 134 Pfam PF03330 Lytic transglycolase 33 129 3.8E-12 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain Amir_2872 ae8b50ca9314ea2ab79e663d8fb2a364 134 SUPERFAMILY SSF50685 21 133 2.83E-23 T 14-10-2018 IPR036908 RlpA-like domain superfamily Amir_2872 ae8b50ca9314ea2ab79e663d8fb2a364 134 Gene3D G3DSA:2.40.40.10 28 134 5.1E-27 T 14-10-2018 IPR036908 RlpA-like domain superfamily Amir_4231 87ce9c557fd06bb3893db530cfd285ab 188 SUPERFAMILY SSF48498 76 181 3.93E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4231 87ce9c557fd06bb3893db530cfd285ab 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 46 3.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4231 87ce9c557fd06bb3893db530cfd285ab 188 Gene3D G3DSA:1.10.357.10 50 183 4.8E-25 T 14-10-2018 Amir_4231 87ce9c557fd06bb3893db530cfd285ab 188 SUPERFAMILY SSF46689 5 68 6.48E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4231 87ce9c557fd06bb3893db530cfd285ab 188 Gene3D G3DSA:1.10.10.60 1 49 1.1E-16 T 14-10-2018 Amir_5540 d61633d5a7074bd5886ea4617eeec569 200 SMART SM00448 14 125 2.3E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5540 d61633d5a7074bd5886ea4617eeec569 200 Gene3D G3DSA:3.40.50.2300 2 142 1.2E-36 T 14-10-2018 Amir_5540 d61633d5a7074bd5886ea4617eeec569 200 SMART SM01012 141 196 3.0E-24 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_5540 d61633d5a7074bd5886ea4617eeec569 200 Pfam PF03861 ANTAR domain 145 196 6.1E-21 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_5540 d61633d5a7074bd5886ea4617eeec569 200 Gene3D G3DSA:1.10.10.10 143 200 4.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5540 d61633d5a7074bd5886ea4617eeec569 200 SUPERFAMILY SSF52172 9 196 1.99E-56 T 14-10-2018 IPR011006 CheY-like superfamily Amir_5540 d61633d5a7074bd5886ea4617eeec569 200 Pfam PF00072 Response regulator receiver domain 16 125 7.7E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5540 d61633d5a7074bd5886ea4617eeec569 200 PIRSF PIRSF036382 3 200 1.0E-72 T 14-10-2018 IPR008327 Signal transduction response regulator, antiterminator Amir_0590 2cf34ab8500da8412edb978530880037 276 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 11 121 1.7E-10 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Amir_0590 2cf34ab8500da8412edb978530880037 276 SUPERFAMILY SSF52402 10 169 1.92E-21 T 14-10-2018 Amir_0590 2cf34ab8500da8412edb978530880037 276 Gene3D G3DSA:3.40.50.620 4 186 3.2E-27 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_1603 2c564d27d3a584789ddd9b7624ede04b 189 SUPERFAMILY SSF48498 77 188 1.56E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_1603 2c564d27d3a584789ddd9b7624ede04b 189 Gene3D G3DSA:1.10.10.60 4 48 1.3E-18 T 14-10-2018 Amir_1603 2c564d27d3a584789ddd9b7624ede04b 189 SUPERFAMILY SSF46689 5 80 7.7E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_1603 2c564d27d3a584789ddd9b7624ede04b 189 Gene3D G3DSA:1.10.357.10 49 188 3.4E-31 T 14-10-2018 Amir_1603 2c564d27d3a584789ddd9b7624ede04b 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 2.5E-19 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1603 2c564d27d3a584789ddd9b7624ede04b 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.5E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1603 2c564d27d3a584789ddd9b7624ede04b 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.5E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2022 3c59c179d8a6c011a6fec1a4e331e6f9 425 Gene3D G3DSA:3.90.1150.10 18 413 5.8E-97 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_2022 3c59c179d8a6c011a6fec1a4e331e6f9 425 SUPERFAMILY SSF53383 18 417 1.92E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_2022 3c59c179d8a6c011a6fec1a4e331e6f9 425 Gene3D G3DSA:3.40.640.10 64 325 5.8E-97 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_2022 3c59c179d8a6c011a6fec1a4e331e6f9 425 PIRSF PIRSF000521 123 166 0.22 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_2022 3c59c179d8a6c011a6fec1a4e331e6f9 425 PIRSF PIRSF000521 9 134 0.21 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_2022 3c59c179d8a6c011a6fec1a4e331e6f9 425 PIRSF PIRSF000521 184 421 7.6E-27 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_2022 3c59c179d8a6c011a6fec1a4e331e6f9 425 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 13 416 2.5E-124 T 14-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 Amir_2022 3c59c179d8a6c011a6fec1a4e331e6f9 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 278 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_2022 3c59c179d8a6c011a6fec1a4e331e6f9 425 Pfam PF00202 Aminotransferase class-III 31 416 2.8E-72 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_2022 3c59c179d8a6c011a6fec1a4e331e6f9 425 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 14 415 4.1E-175 T 14-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 Amir_4035 0c252ac171b9caed0c868c70609ef109 478 Pfam PF00067 Cytochrome P450 227 388 4.6E-15 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4035 0c252ac171b9caed0c868c70609ef109 478 Gene3D G3DSA:1.10.630.10 90 392 1.7E-31 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4035 0c252ac171b9caed0c868c70609ef109 478 SUPERFAMILY SSF48264 116 378 1.27E-30 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_5745 74177e18e2e366a3e21226cfe5d194ed 417 Pfam PF07690 Major Facilitator Superfamily 20 357 2.3E-47 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_5745 74177e18e2e366a3e21226cfe5d194ed 417 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Amir_5745 74177e18e2e366a3e21226cfe5d194ed 417 SUPERFAMILY SSF103473 10 404 7.46E-65 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_5745 74177e18e2e366a3e21226cfe5d194ed 417 Gene3D G3DSA:1.20.1720.10 12 391 3.0E-104 T 14-10-2018 Amir_5745 74177e18e2e366a3e21226cfe5d194ed 417 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 8.0E-5 T 14-10-2018 Amir_5745 74177e18e2e366a3e21226cfe5d194ed 417 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 8.0E-5 T 14-10-2018 Amir_5745 74177e18e2e366a3e21226cfe5d194ed 417 PRINTS PR01036 Tetracycline resistance protein TetB signature 285 309 8.0E-5 T 14-10-2018 Amir_5745 74177e18e2e366a3e21226cfe5d194ed 417 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 12 391 6.2E-94 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Amir_4317 56be6b5b4afffc39bb7fb86d59109ca1 331 Pfam PF12833 Helix-turn-helix domain 248 329 4.9E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4317 56be6b5b4afffc39bb7fb86d59109ca1 331 SUPERFAMILY SSF46689 279 328 1.76E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4317 56be6b5b4afffc39bb7fb86d59109ca1 331 Gene3D G3DSA:1.10.10.60 226 331 2.7E-32 T 14-10-2018 Amir_4317 56be6b5b4afffc39bb7fb86d59109ca1 331 SMART SM00342 242 328 6.4E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4317 56be6b5b4afffc39bb7fb86d59109ca1 331 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 279 324 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amir_4317 56be6b5b4afffc39bb7fb86d59109ca1 331 SUPERFAMILY SSF46689 225 276 2.46E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2702 3a7d8cb1615696755469d2f415b18306 348 SUPERFAMILY SSF75005 86 336 2.83E-19 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_2702 3a7d8cb1615696755469d2f415b18306 348 Gene3D G3DSA:2.115.10.20 68 341 6.3E-19 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3811 9ff81809cc923fe3328ac85427969f6a 310 Pfam PF00494 Squalene/phytoene synthase 30 292 2.2E-68 T 14-10-2018 Amir_3811 9ff81809cc923fe3328ac85427969f6a 310 Gene3D G3DSA:1.10.600.10 10 304 2.2E-90 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_3811 9ff81809cc923fe3328ac85427969f6a 310 SUPERFAMILY SSF48576 19 305 1.12E-75 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_3811 9ff81809cc923fe3328ac85427969f6a 310 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 175 200 - T 14-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Amir_2898 5c22599403d6d6aecdc836bfbddbb6be 282 Gene3D G3DSA:1.10.1660.10 6 246 8.5E-20 T 14-10-2018 Amir_2898 5c22599403d6d6aecdc836bfbddbb6be 282 SMART SM00422 4 74 1.9E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_2898 5c22599403d6d6aecdc836bfbddbb6be 282 SUPERFAMILY SSF46955 3 103 2.45E-19 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_2898 5c22599403d6d6aecdc836bfbddbb6be 282 Pfam PF13411 MerR HTH family regulatory protein 5 73 5.0E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_2541 b80f38fa037dcf4e0b17df56ecb1f6de 158 SUPERFAMILY SSF102462 28 157 1.31E-25 T 14-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 Amir_2541 b80f38fa037dcf4e0b17df56ecb1f6de 158 Pfam PF09391 Protein of unknown function (DUF2000) 29 157 1.9E-38 T 14-10-2018 IPR018988 Protein of unknown function DUF2000 Amir_2541 b80f38fa037dcf4e0b17df56ecb1f6de 158 Gene3D G3DSA:3.40.1490.10 27 157 1.8E-9 T 14-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 Amir_2676 1e9a1f8adddd4bfa6897e24f99641cd4 243 SUPERFAMILY SSF52540 27 236 1.62E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2676 1e9a1f8adddd4bfa6897e24f99641cd4 243 SMART SM00382 51 234 1.7E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2676 1e9a1f8adddd4bfa6897e24f99641cd4 243 Gene3D G3DSA:3.40.50.300 15 241 1.5E-39 T 14-10-2018 Amir_2676 1e9a1f8adddd4bfa6897e24f99641cd4 243 Pfam PF00005 ABC transporter 44 186 1.3E-16 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 SUPERFAMILY SSF51338 573 980 8.87E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 SUPERFAMILY SSF69304 325 576 1.16E-34 T 14-10-2018 Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 Pfam PF07676 WD40-like Beta Propeller Repeat 363 389 1.7E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 Pfam PF07676 WD40-like Beta Propeller Repeat 173 195 0.0014 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 Pfam PF07676 WD40-like Beta Propeller Repeat 131 161 6.1E-5 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 Pfam PF07676 WD40-like Beta Propeller Repeat 43 67 0.0078 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 Pfam PF07676 WD40-like Beta Propeller Repeat 448 459 0.08 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 Pfam PF07676 WD40-like Beta Propeller Repeat 496 518 3.0E-5 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 Pfam PF07676 WD40-like Beta Propeller Repeat 84 119 1.9E-7 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 SUPERFAMILY SSF69304 41 243 3.01E-35 T 14-10-2018 Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 SUPERFAMILY SSF51556 645 946 1.19E-40 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 Pfam PF01979 Amidohydrolase family 642 980 2.4E-13 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 Gene3D G3DSA:2.30.40.10 588 651 2.7E-9 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 Gene3D G3DSA:2.120.10.60 321 384 1.8E-5 T 14-10-2018 Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 Gene3D G3DSA:2.120.10.60 385 426 7.5E-6 T 14-10-2018 Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 Gene3D G3DSA:3.20.20.140 652 943 3.8E-39 T 14-10-2018 Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 Gene3D G3DSA:2.120.10.30 31 135 1.9E-22 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 Gene3D G3DSA:2.120.10.30 427 569 1.2E-17 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_5049 7b3f94025146ff73afa43478e1ce5280 1031 Gene3D G3DSA:2.120.10.30 136 269 1.0E-20 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_3958 0776490c7fa0f185ab2f976b88e429e9 365 Pfam PF00544 Pectate lyase 80 280 1.7E-33 T 14-10-2018 IPR002022 Pectate lyase Amir_3958 0776490c7fa0f185ab2f976b88e429e9 365 Gene3D G3DSA:2.160.20.10 35 356 4.4E-99 T 14-10-2018 IPR012334 Pectin lyase fold Amir_3958 0776490c7fa0f185ab2f976b88e429e9 365 SMART SM00656 77 286 4.6E-18 T 14-10-2018 IPR002022 Pectate lyase Amir_3958 0776490c7fa0f185ab2f976b88e429e9 365 SUPERFAMILY SSF51126 34 356 2.04E-72 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_1975 f55afcc93a69dc11d04981d6f46111c4 650 Gene3D G3DSA:3.20.20.80 124 446 4.1E-143 T 14-10-2018 Amir_1975 f55afcc93a69dc11d04981d6f46111c4 650 SUPERFAMILY SSF51445 125 649 4.11E-214 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1975 f55afcc93a69dc11d04981d6f46111c4 650 Pfam PF07477 Glycosyl hydrolase family 67 C-terminus 426 647 7.0E-94 T 14-10-2018 IPR011099 Glycosyl hydrolase family 67, C-terminal GO:0005576|GO:0045493|GO:0046559 Amir_1975 f55afcc93a69dc11d04981d6f46111c4 650 Gene3D G3DSA:3.90.1330.10 448 650 1.1E-81 T 14-10-2018 IPR037054 Alpha-glucuronidase, C-terminal domain superfamily GO:0005576|GO:0045493|GO:0046559 Amir_1975 f55afcc93a69dc11d04981d6f46111c4 650 Pfam PF07488 Glycosyl hydrolase family 67 middle domain 116 420 2.7E-127 T 14-10-2018 IPR011100 Glycosyl hydrolase family 67, catalytic domain GO:0005576|GO:0045493|GO:0046559 Amir_5513 50cf5a94f9edad3989c3d528c956249a 330 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 4 318 3.8E-117 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 Amir_5513 50cf5a94f9edad3989c3d528c956249a 330 Pfam PF03741 Integral membrane protein TerC family 69 272 1.6E-51 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 Amir_4437 ef88cba4781fc79141df36c401c028d4 294 SUPERFAMILY SSF81345 8 263 1.96E-36 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_4437 ef88cba4781fc79141df36c401c028d4 294 Pfam PF00950 ABC 3 transport family 13 266 1.1E-75 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Amir_5546 89801a997f2151368257a44199f1a1c1 264 Gene3D G3DSA:3.40.50.1820 2 264 9.3E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5546 89801a997f2151368257a44199f1a1c1 264 PRINTS PR00412 Epoxide hydrolase signature 102 115 1.0E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_5546 89801a997f2151368257a44199f1a1c1 264 PRINTS PR00412 Epoxide hydrolase signature 239 261 1.0E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_5546 89801a997f2151368257a44199f1a1c1 264 PRINTS PR00412 Epoxide hydrolase signature 47 62 1.0E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_5546 89801a997f2151368257a44199f1a1c1 264 SUPERFAMILY SSF53474 1 263 1.77E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5546 89801a997f2151368257a44199f1a1c1 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 101 9.6E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_5546 89801a997f2151368257a44199f1a1c1 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 208 222 9.6E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_5546 89801a997f2151368257a44199f1a1c1 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 9.6E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_5546 89801a997f2151368257a44199f1a1c1 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 9.6E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_5546 89801a997f2151368257a44199f1a1c1 264 Pfam PF12697 Alpha/beta hydrolase family 22 256 3.2E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_1078 8a167122669ac6279d3e7e447ba37289 555 SUPERFAMILY SSF56672 157 554 1.78E-62 T 14-10-2018 Amir_1078 8a167122669ac6279d3e7e447ba37289 555 Gene3D G3DSA:3.30.70.370 299 532 9.4E-25 T 14-10-2018 Amir_1078 8a167122669ac6279d3e7e447ba37289 555 Gene3D G3DSA:1.10.150.20 336 474 9.4E-25 T 14-10-2018 Amir_1078 8a167122669ac6279d3e7e447ba37289 555 PRINTS PR00868 DNA-polymerase family A (pol I) signature 467 483 3.9E-5 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_1078 8a167122669ac6279d3e7e447ba37289 555 PRINTS PR00868 DNA-polymerase family A (pol I) signature 497 510 3.9E-5 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_1078 8a167122669ac6279d3e7e447ba37289 555 PRINTS PR00868 DNA-polymerase family A (pol I) signature 327 350 3.9E-5 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_1078 8a167122669ac6279d3e7e447ba37289 555 Pfam PF00476 DNA polymerase family A 207 528 1.6E-22 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_1078 8a167122669ac6279d3e7e447ba37289 555 SMART SM00482 313 514 4.8E-10 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_5000 b403216432cf986d700775384dd3020d 185 Gene3D G3DSA:3.40.630.30 4 184 7.0E-53 T 14-10-2018 Amir_5000 b403216432cf986d700775384dd3020d 185 SUPERFAMILY SSF55729 5 175 7.88E-47 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_5000 b403216432cf986d700775384dd3020d 185 Pfam PF13302 Acetyltransferase (GNAT) domain 11 151 7.3E-34 T 14-10-2018 IPR000182 GNAT domain Amir_0121 a04040271771069677b9c75cfefdd440 273 Gene3D G3DSA:3.30.1240.10 85 198 9.7E-56 T 14-10-2018 Amir_0121 a04040271771069677b9c75cfefdd440 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 269 5.0E-43 T 14-10-2018 IPR000150 Cof family GO:0016787 Amir_0121 a04040271771069677b9c75cfefdd440 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 269 4.4E-49 T 14-10-2018 Amir_0121 a04040271771069677b9c75cfefdd440 273 SUPERFAMILY SSF56784 3 273 3.84E-56 T 14-10-2018 IPR036412 HAD-like superfamily Amir_0121 a04040271771069677b9c75cfefdd440 273 Gene3D G3DSA:3.40.50.1000 6 270 9.7E-56 T 14-10-2018 IPR023214 HAD superfamily Amir_4519 4c7614f21afa2d39817ddee9ff6cfcab 440 Gene3D G3DSA:1.20.1260.20 18 181 9.2E-9 T 14-10-2018 IPR038332 PPE superfamily Amir_4519 4c7614f21afa2d39817ddee9ff6cfcab 440 SUPERFAMILY SSF140459 24 180 4.71E-10 T 14-10-2018 Amir_4519 4c7614f21afa2d39817ddee9ff6cfcab 440 Pfam PF00823 PPE family 24 167 8.4E-7 T 14-10-2018 IPR000030 PPE family Amir_6286 1c31222741c26ba690dc8e968b4df2df 250 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 196 208 8.5E-7 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_6286 1c31222741c26ba690dc8e968b4df2df 250 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 113 127 8.5E-7 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_6286 1c31222741c26ba690dc8e968b4df2df 250 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 67 82 8.5E-7 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_6286 1c31222741c26ba690dc8e968b4df2df 250 SMART SM00020 42 244 1.0E-11 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_6286 1c31222741c26ba690dc8e968b4df2df 250 Gene3D G3DSA:2.40.10.10 53 142 5.1E-15 T 14-10-2018 Amir_6286 1c31222741c26ba690dc8e968b4df2df 250 Gene3D G3DSA:2.40.10.10 153 249 9.3E-10 T 14-10-2018 Amir_6286 1c31222741c26ba690dc8e968b4df2df 250 Pfam PF00089 Trypsin 49 244 4.9E-23 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_6286 1c31222741c26ba690dc8e968b4df2df 250 SUPERFAMILY SSF50494 32 248 9.56E-38 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_3325 438bda094aa0bef8ca6662998ae6a77e 710 Gene3D G3DSA:3.40.50.1820 430 683 7.2E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3325 438bda094aa0bef8ca6662998ae6a77e 710 SUPERFAMILY SSF53474 433 683 2.89E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3325 438bda094aa0bef8ca6662998ae6a77e 710 Gene3D G3DSA:2.140.10.30 1 428 3.4E-72 T 14-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily Amir_3325 438bda094aa0bef8ca6662998ae6a77e 710 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 88 403 3.5E-38 T 14-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 Amir_3325 438bda094aa0bef8ca6662998ae6a77e 710 SUPERFAMILY SSF82171 33 419 1.83E-23 T 14-10-2018 Amir_3325 438bda094aa0bef8ca6662998ae6a77e 710 Pfam PF00326 Prolyl oligopeptidase family 494 685 7.8E-37 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Amir_2124 ebd396bf61221d11591b01341037f332 252 Hamap MF_02036 Gamma-glutamyl-hercynylcysteine sulfoxide hydrolase [egtC]. 1 249 37.603 T 14-10-2018 IPR032889 Gamma-glutamyl-hercynylcysteine sulfoxide hydrolase, Actinobacteria GO:0016811|GO:0052699 KEGG: 00340+3.5.1.118|MetaCyc: PWY-7255 Amir_2124 ebd396bf61221d11591b01341037f332 252 TIGRFAM TIGR03442 TIGR03442: ergothioneine biosynthesis protein EgtC 1 238 2.2E-79 T 14-10-2018 IPR017808 Ergothioneine biosynthesis protein EgtC GO:0052699 Amir_2124 ebd396bf61221d11591b01341037f332 252 Pfam PF13522 Glutamine amidotransferase domain 75 216 1.1E-17 T 14-10-2018 Amir_2124 ebd396bf61221d11591b01341037f332 252 Gene3D G3DSA:3.60.20.10 2 248 3.1E-79 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_2124 ebd396bf61221d11591b01341037f332 252 SUPERFAMILY SSF56235 2 238 1.43E-19 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_2038 abf343ec67ce1f49e6702be0fb00d6e5 207 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 30 161 3.3E-35 T 14-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 Amir_2038 abf343ec67ce1f49e6702be0fb00d6e5 207 SUPERFAMILY SSF89155 10 166 3.53E-30 T 14-10-2018 IPR036411 TorD-like superfamily Amir_2038 abf343ec67ce1f49e6702be0fb00d6e5 207 Gene3D G3DSA:1.10.3480.10 3 177 5.2E-9 T 14-10-2018 Amir_2038 abf343ec67ce1f49e6702be0fb00d6e5 207 Pfam PF02613 Nitrate reductase delta subunit 40 156 9.9E-14 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone Amir_1859 2180ca25e255ecd349bfd40ba5bb7745 736 Gene3D G3DSA:2.60.120.200 101 286 1.7E-24 T 14-10-2018 Amir_1859 2180ca25e255ecd349bfd40ba5bb7745 736 SUPERFAMILY SSF48208 280 395 9.07E-6 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_1859 2180ca25e255ecd349bfd40ba5bb7745 736 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 102 256 2.2E-25 T 14-10-2018 Amir_1859 2180ca25e255ecd349bfd40ba5bb7745 736 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 277 528 6.2E-43 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 Amir_1859 2180ca25e255ecd349bfd40ba5bb7745 736 SMART SM00560 112 253 0.0033 T 14-10-2018 IPR006558 LamG-like jellyroll fold Amir_1859 2180ca25e255ecd349bfd40ba5bb7745 736 SUPERFAMILY SSF49899 92 260 7.24E-26 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_2523 6cabe8272794a863fa84247bfec24295 551 Pfam PF07690 Major Facilitator Superfamily 31 427 3.7E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2523 6cabe8272794a863fa84247bfec24295 551 SUPERFAMILY SSF103473 13 513 1.28E-64 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2523 6cabe8272794a863fa84247bfec24295 551 PRINTS PR01036 Tetracycline resistance protein TetB signature 151 175 8.1E-12 T 14-10-2018 Amir_2523 6cabe8272794a863fa84247bfec24295 551 PRINTS PR01036 Tetracycline resistance protein TetB signature 418 437 8.1E-12 T 14-10-2018 Amir_2523 6cabe8272794a863fa84247bfec24295 551 PRINTS PR01036 Tetracycline resistance protein TetB signature 121 141 8.1E-12 T 14-10-2018 Amir_2523 6cabe8272794a863fa84247bfec24295 551 PRINTS PR01036 Tetracycline resistance protein TetB signature 30 54 8.1E-12 T 14-10-2018 Amir_2523 6cabe8272794a863fa84247bfec24295 551 Gene3D G3DSA:1.20.1250.20 273 512 2.1E-16 T 14-10-2018 Amir_2523 6cabe8272794a863fa84247bfec24295 551 Gene3D G3DSA:1.20.1720.10 28 237 8.7E-44 T 14-10-2018 Amir_4182 d703160d5ac73d96553ea1fc185dbba9 690 PRINTS PR00364 Disease resistance protein signature 138 152 2.5E-7 T 14-10-2018 Amir_4182 d703160d5ac73d96553ea1fc185dbba9 690 PRINTS PR00364 Disease resistance protein signature 224 238 2.5E-7 T 14-10-2018 Amir_4182 d703160d5ac73d96553ea1fc185dbba9 690 PRINTS PR00364 Disease resistance protein signature 62 77 2.5E-7 T 14-10-2018 Amir_4182 d703160d5ac73d96553ea1fc185dbba9 690 SMART SM00382 59 192 3.6E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4182 d703160d5ac73d96553ea1fc185dbba9 690 SUPERFAMILY SSF52540 58 286 2.73E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4182 d703160d5ac73d96553ea1fc185dbba9 690 Gene3D G3DSA:1.25.40.10 460 669 4.4E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4182 d703160d5ac73d96553ea1fc185dbba9 690 Gene3D G3DSA:3.40.50.300 33 180 2.4E-20 T 14-10-2018 Amir_4182 d703160d5ac73d96553ea1fc185dbba9 690 SUPERFAMILY SSF48452 470 661 4.14E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4182 d703160d5ac73d96553ea1fc185dbba9 690 SMART SM00028 468 501 0.038 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_4182 d703160d5ac73d96553ea1fc185dbba9 690 SMART SM00028 588 621 40.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_5611 667075181effe3ade0db607f5533ef40 589 SUPERFAMILY SSF52266 19 341 3.66E-25 T 14-10-2018 Amir_5611 667075181effe3ade0db607f5533ef40 589 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 182 331 1.6E-15 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_5611 667075181effe3ade0db607f5533ef40 589 Gene3D G3DSA:3.40.50.1110 152 341 2.0E-22 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_4158 e22a0cd5db82ab84c0b2e014a3b08356 167 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 160 35.304 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Amir_4158 e22a0cd5db82ab84c0b2e014a3b08356 167 Pfam PF01625 Peptide methionine sulfoxide reductase 8 154 2.7E-58 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Amir_4158 e22a0cd5db82ab84c0b2e014a3b08356 167 SUPERFAMILY SSF55068 5 162 1.83E-65 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Amir_4158 e22a0cd5db82ab84c0b2e014a3b08356 167 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 7 154 6.6E-50 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Amir_4158 e22a0cd5db82ab84c0b2e014a3b08356 167 Gene3D G3DSA:3.30.1060.10 4 167 4.2E-70 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Amir_6239 fac96edf038a2321216875850a7ff5c8 343 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 2 338 27.875 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Amir_6239 fac96edf038a2321216875850a7ff5c8 343 SUPERFAMILY SSF53474 25 337 6.73E-84 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6239 fac96edf038a2321216875850a7ff5c8 343 PIRSF PIRSF000443 20 343 6.0E-104 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Amir_6239 fac96edf038a2321216875850a7ff5c8 343 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 25 337 1.1E-109 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Amir_6239 fac96edf038a2321216875850a7ff5c8 343 Gene3D G3DSA:3.40.50.1820 17 341 1.6E-112 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6239 fac96edf038a2321216875850a7ff5c8 343 Pfam PF00561 alpha/beta hydrolase fold 41 325 2.7E-28 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_0234 f192c041b87ee61ec77d6af234f62b1d 155 Pfam PF09424 Yqey-like protein 5 153 2.8E-45 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 Amir_0234 f192c041b87ee61ec77d6af234f62b1d 155 Gene3D G3DSA:1.10.10.410 94 154 3.9E-14 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Amir_0234 f192c041b87ee61ec77d6af234f62b1d 155 Gene3D G3DSA:1.10.1510.10 2 93 2.2E-25 T 14-10-2018 Amir_0234 f192c041b87ee61ec77d6af234f62b1d 155 SUPERFAMILY SSF89095 4 154 1.73E-33 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Amir_5941 157f1d80afd615f9f17e4de2e095329d 401 Gene3D G3DSA:3.20.20.60 82 325 1.3E-15 T 14-10-2018 Amir_5941 157f1d80afd615f9f17e4de2e095329d 401 SUPERFAMILY SSF51621 87 321 5.89E-18 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Amir_2307 aafc5eab72697321a5f43881f97f7cb8 218 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 98 110 2.2E-5 T 14-10-2018 Amir_2307 aafc5eab72697321a5f43881f97f7cb8 218 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 154 178 2.2E-5 T 14-10-2018 Amir_2307 aafc5eab72697321a5f43881f97f7cb8 218 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 38 52 2.2E-5 T 14-10-2018 Amir_2307 aafc5eab72697321a5f43881f97f7cb8 218 TIGRFAM TIGR00537 hemK_rel_arch: putative methylase 13 186 1.1E-26 T 14-10-2018 IPR004557 Eukaryotic/archaeal PrmC-related GO:0008276 Reactome: R-HSA-156581|Reactome: R-HSA-72764 Amir_2307 aafc5eab72697321a5f43881f97f7cb8 218 Pfam PF05175 Methyltransferase small domain 19 107 3.4E-11 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Amir_2307 aafc5eab72697321a5f43881f97f7cb8 218 Gene3D G3DSA:3.40.50.150 4 181 1.1E-32 T 14-10-2018 Amir_2307 aafc5eab72697321a5f43881f97f7cb8 218 SUPERFAMILY SSF53335 9 183 1.78E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3456 a5cf1e5d431dab723c43e592c4926e8b 177 SUPERFAMILY SSF50370 41 165 6.29E-12 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_3456 a5cf1e5d431dab723c43e592c4926e8b 177 Pfam PF00652 Ricin-type beta-trefoil lectin domain 43 165 2.7E-8 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3456 a5cf1e5d431dab723c43e592c4926e8b 177 Gene3D G3DSA:2.80.10.50 41 171 6.2E-12 T 14-10-2018 Amir_6162 bfa1376f178137cbfb118af3861db58d 309 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 26 298 1.6E-77 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Amir_6162 bfa1376f178137cbfb118af3861db58d 309 Gene3D G3DSA:1.20.1510.10 26 219 4.5E-39 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Amir_6162 bfa1376f178137cbfb118af3861db58d 309 SUPERFAMILY SSF160240 223 298 8.37E-7 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Amir_6162 bfa1376f178137cbfb118af3861db58d 309 SUPERFAMILY SSF161111 26 220 9.29E-50 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Amir_6162 bfa1376f178137cbfb118af3861db58d 309 Pfam PF01545 Cation efflux family 27 218 1.3E-43 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Amir_6690 60de0881cf95cbaf60863ccba7edffaa 317 Pfam PF05138 Phenylacetic acid catabolic protein 61 317 1.7E-79 T 14-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 Amir_6690 60de0881cf95cbaf60863ccba7edffaa 317 Gene3D G3DSA:1.20.1260.10 57 317 6.1E-96 T 14-10-2018 IPR012347 Ferritin-like Amir_6690 60de0881cf95cbaf60863ccba7edffaa 317 SUPERFAMILY SSF47240 63 311 6.22E-67 T 14-10-2018 IPR009078 Ferritin-like superfamily Amir_6690 60de0881cf95cbaf60863ccba7edffaa 317 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 72 317 7.9E-71 T 14-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 Amir_6994 dab673793bab0e0ec4e85427876acdbc 603 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 10 603 49.355 T 14-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Amir_6994 dab673793bab0e0ec4e85427876acdbc 603 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 22 239 7.0E-97 T 14-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Amir_6994 dab673793bab0e0ec4e85427876acdbc 603 PIRSF PIRSF001348 2 603 1.0E-277 T 14-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Amir_6994 dab673793bab0e0ec4e85427876acdbc 603 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 267 275 - T 14-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Amir_6994 dab673793bab0e0ec4e85427876acdbc 603 SUPERFAMILY SSF53795 243 602 2.52E-157 T 14-10-2018 Amir_6994 dab673793bab0e0ec4e85427876acdbc 603 Gene3D G3DSA:3.90.228.20 243 601 4.3E-271 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Amir_6994 dab673793bab0e0ec4e85427876acdbc 603 Gene3D G3DSA:2.170.8.10 57 397 4.3E-271 T 14-10-2018 Amir_6994 dab673793bab0e0ec4e85427876acdbc 603 Gene3D G3DSA:3.40.449.10 22 242 4.3E-271 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Amir_6994 dab673793bab0e0ec4e85427876acdbc 603 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 243 602 1.8E-169 T 14-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Amir_6994 dab673793bab0e0ec4e85427876acdbc 603 SUPERFAMILY SSF68923 12 242 2.67E-94 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Amir_3005 4a85475f8b0bc58b93d9ea996e3cd694 387 Pfam PF07730 Histidine kinase 181 248 1.2E-11 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_3005 4a85475f8b0bc58b93d9ea996e3cd694 387 SUPERFAMILY SSF55874 287 385 8.43E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3005 4a85475f8b0bc58b93d9ea996e3cd694 387 Gene3D G3DSA:3.30.565.10 255 384 5.4E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0274 63188bc847eb7e1269bf521af082d0f6 270 SUPERFAMILY SSF56784 11 221 4.39E-28 T 14-10-2018 IPR036412 HAD-like superfamily Amir_0274 63188bc847eb7e1269bf521af082d0f6 270 Pfam PF12710 haloacid dehalogenase-like hydrolase 13 198 1.9E-32 T 14-10-2018 Amir_0274 63188bc847eb7e1269bf521af082d0f6 270 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 12 211 2.6E-66 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Amir_0274 63188bc847eb7e1269bf521af082d0f6 270 Gene3D G3DSA:1.20.1440.100 24 99 8.1E-66 T 14-10-2018 Amir_0274 63188bc847eb7e1269bf521af082d0f6 270 Gene3D G3DSA:3.40.50.1000 13 224 8.1E-66 T 14-10-2018 IPR023214 HAD superfamily Amir_0274 63188bc847eb7e1269bf521af082d0f6 270 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 12 200 3.8E-23 T 14-10-2018 Amir_4866 5c3ede65927a1cae083a37da0acf6375 510 Gene3D G3DSA:2.120.10.30 286 467 2.4E-16 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_4866 5c3ede65927a1cae083a37da0acf6375 510 Gene3D G3DSA:2.120.10.30 154 266 1.3E-8 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_4866 5c3ede65927a1cae083a37da0acf6375 510 SUPERFAMILY SSF63825 14 220 5.75E-26 T 14-10-2018 Amir_4866 5c3ede65927a1cae083a37da0acf6375 510 Gene3D G3DSA:2.120.10.30 4 153 4.4E-17 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_4866 5c3ede65927a1cae083a37da0acf6375 510 SUPERFAMILY SSF63829 310 505 9.48E-23 T 14-10-2018 Amir_4244 08bc39724af5aca791dfc5b830d8d002 287 SUPERFAMILY SSF47413 29 80 1.27E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_4244 08bc39724af5aca791dfc5b830d8d002 287 SMART SM00530 9 81 6.2E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_4244 08bc39724af5aca791dfc5b830d8d002 287 Pfam PF13560 Helix-turn-helix domain 5 84 5.1E-16 T 14-10-2018 Amir_4244 08bc39724af5aca791dfc5b830d8d002 287 Gene3D G3DSA:1.10.260.40 22 94 1.7E-8 T 14-10-2018 Amir_0085 a3d34f94bc0036a3ed2f70a94947cee7 264 Pfam PF02517 CAAX protease self-immunity 158 247 4.6E-14 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Amir_0098 bbcba481b72d3a813839de3bee464c15 160 SUPERFAMILY SSF55729 2 146 3.95E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_0098 bbcba481b72d3a813839de3bee464c15 160 Gene3D G3DSA:3.40.630.30 29 158 1.6E-24 T 14-10-2018 Amir_0098 bbcba481b72d3a813839de3bee464c15 160 Pfam PF00583 Acetyltransferase (GNAT) family 36 117 5.4E-17 T 14-10-2018 IPR000182 GNAT domain Amir_0098 bbcba481b72d3a813839de3bee464c15 160 PIRSF PIRSF037663 1 143 7.6E-12 T 14-10-2018 IPR017255 Acetyltransferase, GNAT, predicted Amir_6421 2724367c96d9abb3ca32f5d0c4140af4 270 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 31 268 4.3E-79 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Amir_6421 2724367c96d9abb3ca32f5d0c4140af4 270 Gene3D G3DSA:3.40.50.1580 3 269 5.6E-90 T 14-10-2018 Amir_6421 2724367c96d9abb3ca32f5d0c4140af4 270 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 85 126 - T 14-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 Amir_6421 2724367c96d9abb3ca32f5d0c4140af4 270 SUPERFAMILY SSF53167 16 268 9.04E-78 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Amir_6421 2724367c96d9abb3ca32f5d0c4140af4 270 TIGRFAM TIGR01698 PUNP: purine nucleotide phosphorylase 31 267 1.1E-101 T 14-10-2018 IPR011269 Putative purine nucleotide phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 Amir_6421 2724367c96d9abb3ca32f5d0c4140af4 270 Pfam PF01048 Phosphorylase superfamily 31 267 8.8E-42 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Amir_6421 2724367c96d9abb3ca32f5d0c4140af4 270 PIRSF PIRSF000477 3 270 1.9E-92 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Amir_3117 e63b3bf4171513d3bc868b8c74b19f1d 204 Gene3D G3DSA:1.10.357.10 1 203 1.4E-29 T 14-10-2018 Amir_3117 e63b3bf4171513d3bc868b8c74b19f1d 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3117 e63b3bf4171513d3bc868b8c74b19f1d 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3117 e63b3bf4171513d3bc868b8c74b19f1d 204 SUPERFAMILY SSF46689 2 71 5.13E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3117 e63b3bf4171513d3bc868b8c74b19f1d 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 1.0E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5888 bae64a1a3d4e7e0b256a492bdbb85385 385 Gene3D G3DSA:3.20.20.20 15 273 1.4E-104 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_5888 bae64a1a3d4e7e0b256a492bdbb85385 385 PIRSF PIRSF004640 14 375 3.1E-143 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Amir_5888 bae64a1a3d4e7e0b256a492bdbb85385 385 SUPERFAMILY SSF51717 49 221 9.42E-9 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_5888 bae64a1a3d4e7e0b256a492bdbb85385 385 SUPERFAMILY SSF56014 278 358 5.67E-11 T 14-10-2018 Amir_5888 bae64a1a3d4e7e0b256a492bdbb85385 385 Pfam PF04551 GcpE protein 23 363 5.5E-133 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Amir_5888 bae64a1a3d4e7e0b256a492bdbb85385 385 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 20 362 3.8E-126 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Amir_5888 bae64a1a3d4e7e0b256a492bdbb85385 385 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 18 369 33.245 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Amir_5888 bae64a1a3d4e7e0b256a492bdbb85385 385 Gene3D G3DSA:3.30.413.10 274 374 6.2E-36 T 14-10-2018 Amir_4296 815df6de1167488a7da3c43159ec3955 346 Pfam PF01497 Periplasmic binding protein 64 310 7.8E-33 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Amir_4296 815df6de1167488a7da3c43159ec3955 346 Gene3D G3DSA:3.40.50.1980 41 181 2.4E-43 T 14-10-2018 Amir_4296 815df6de1167488a7da3c43159ec3955 346 Gene3D G3DSA:3.40.50.1980 183 346 4.4E-50 T 14-10-2018 Amir_4296 815df6de1167488a7da3c43159ec3955 346 SUPERFAMILY SSF53807 42 312 5.1E-49 T 14-10-2018 Amir_6333 97199513a2874dbf93cf84e0a5c11187 321 Hamap MF_01257 2-phospho-L-lactate transferase [cofD]. 1 321 135.936 T 14-10-2018 IPR010115 2-phospho-L-lactate transferase GO:0000287|GO:0016780|GO:0051188 KEGG: 00680+2.7.8.28|MetaCyc: PWY-5198 Amir_6333 97199513a2874dbf93cf84e0a5c11187 321 SUPERFAMILY SSF142338 3 316 1.16E-83 T 14-10-2018 Amir_6333 97199513a2874dbf93cf84e0a5c11187 321 Pfam PF01933 Uncharacterised protein family UPF0052 3 282 2.1E-66 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 Amir_6333 97199513a2874dbf93cf84e0a5c11187 321 Gene3D G3DSA:1.10.8.240 39 127 1.1E-93 T 14-10-2018 Amir_6333 97199513a2874dbf93cf84e0a5c11187 321 Gene3D G3DSA:3.40.50.10680 7 288 1.1E-93 T 14-10-2018 Amir_6333 97199513a2874dbf93cf84e0a5c11187 321 TIGRFAM TIGR01819 F420_cofD: 2-phospho-L-lactate transferase 3 313 1.9E-121 T 14-10-2018 IPR010115 2-phospho-L-lactate transferase GO:0000287|GO:0016780|GO:0051188 KEGG: 00680+2.7.8.28|MetaCyc: PWY-5198 Amir_1162 4de3051535da460763d0ff3cf6783c27 763 SUPERFAMILY SSF50692 640 762 5.65E-17 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Amir_1162 4de3051535da460763d0ff3cf6783c27 763 Gene3D G3DSA:3.40.50.740 132 590 4.5E-78 T 14-10-2018 Amir_1162 4de3051535da460763d0ff3cf6783c27 763 SUPERFAMILY SSF53706 59 634 1.83E-141 T 14-10-2018 Amir_1162 4de3051535da460763d0ff3cf6783c27 763 PIRSF PIRSF000144 3 763 0.0 T 14-10-2018 Amir_1162 4de3051535da460763d0ff3cf6783c27 763 Pfam PF01568 Molydopterin dinucleotide binding domain 644 755 1.6E-9 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Amir_1162 4de3051535da460763d0ff3cf6783c27 763 Gene3D G3DSA:3.40.228.10 197 413 4.5E-78 T 14-10-2018 Amir_1162 4de3051535da460763d0ff3cf6783c27 763 Pfam PF00384 Molybdopterin oxidoreductase 121 501 1.7E-31 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_1162 4de3051535da460763d0ff3cf6783c27 763 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 24 760 1.1E-291 T 14-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 Amir_1590 b2439d894a320f4ef877be587a9d3ef2 133 Pfam PF11236 Protein of unknown function (DUF3037) 7 124 4.1E-41 T 14-10-2018 IPR021398 Protein of unknown function DUF3037 Amir_1831 be4e1c9dbe502aac62a88a45b803a80b 374 SMART SM00637 277 371 9.7E-20 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_1831 be4e1c9dbe502aac62a88a45b803a80b 374 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 50 231 6.9E-18 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_1831 be4e1c9dbe502aac62a88a45b803a80b 374 Pfam PF00553 Cellulose binding domain 277 364 3.0E-18 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_1831 be4e1c9dbe502aac62a88a45b803a80b 374 SUPERFAMILY SSF49384 271 370 1.4E-23 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_1831 be4e1c9dbe502aac62a88a45b803a80b 374 Gene3D G3DSA:3.40.50.1110 45 248 8.0E-64 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_1831 be4e1c9dbe502aac62a88a45b803a80b 374 SUPERFAMILY SSF52266 38 241 2.96E-33 T 14-10-2018 Amir_1831 be4e1c9dbe502aac62a88a45b803a80b 374 Gene3D G3DSA:2.60.40.290 272 373 6.1E-21 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_3964 551e27eba786ef755ac615571f0625ca 348 SUPERFAMILY SSF50129 7 173 1.83E-55 T 14-10-2018 IPR011032 GroES-like superfamily Amir_3964 551e27eba786ef755ac615571f0625ca 348 SUPERFAMILY SSF51735 148 311 1.04E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3964 551e27eba786ef755ac615571f0625ca 348 Pfam PF00107 Zinc-binding dehydrogenase 185 307 7.7E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_3964 551e27eba786ef755ac615571f0625ca 348 Gene3D G3DSA:3.90.180.10 13 341 3.3E-140 T 14-10-2018 Amir_3964 551e27eba786ef755ac615571f0625ca 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amir_3964 551e27eba786ef755ac615571f0625ca 348 Gene3D G3DSA:3.40.50.720 159 313 3.3E-140 T 14-10-2018 Amir_3964 551e27eba786ef755ac615571f0625ca 348 SMART SM00829 11 341 4.6E-9 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_3964 551e27eba786ef755ac615571f0625ca 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 143 1.7E-29 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_0392 5239d773c4a96e01af6d8a68288e6075 1075 Pfam PF00082 Subtilase family 170 646 4.1E-44 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_0392 5239d773c4a96e01af6d8a68288e6075 1075 PRINTS PR00723 Subtilisin serine protease family (S8) signature 170 189 2.4E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_0392 5239d773c4a96e01af6d8a68288e6075 1075 PRINTS PR00723 Subtilisin serine protease family (S8) signature 239 252 2.4E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_0392 5239d773c4a96e01af6d8a68288e6075 1075 PRINTS PR00723 Subtilisin serine protease family (S8) signature 608 624 2.4E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_0392 5239d773c4a96e01af6d8a68288e6075 1075 Gene3D G3DSA:3.40.50.200 158 442 6.4E-41 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_0392 5239d773c4a96e01af6d8a68288e6075 1075 SUPERFAMILY SSF52743 162 677 1.7E-62 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_0392 5239d773c4a96e01af6d8a68288e6075 1075 Gene3D G3DSA:3.40.50.200 499 686 1.2E-27 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_0392 5239d773c4a96e01af6d8a68288e6075 1075 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 175 186 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_0392 5239d773c4a96e01af6d8a68288e6075 1075 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 243 253 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Amir_0392 5239d773c4a96e01af6d8a68288e6075 1075 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 609 619 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_2245 17ee6e74e881058636eb0b29678ac1be 956 SMART SM00421 895 952 1.3E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2245 17ee6e74e881058636eb0b29678ac1be 956 SUPERFAMILY SSF52540 8 257 2.44E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2245 17ee6e74e881058636eb0b29678ac1be 956 Gene3D G3DSA:1.10.10.10 834 956 3.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2245 17ee6e74e881058636eb0b29678ac1be 956 Pfam PF13191 AAA ATPase domain 8 167 1.5E-25 T 14-10-2018 Amir_2245 17ee6e74e881058636eb0b29678ac1be 956 ProSitePatterns PS00622 LuxR-type HTH domain signature. 912 939 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2245 17ee6e74e881058636eb0b29678ac1be 956 SMART SM00382 29 197 1.9E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2245 17ee6e74e881058636eb0b29678ac1be 956 Gene3D G3DSA:3.40.50.300 4 167 1.8E-6 T 14-10-2018 Amir_2245 17ee6e74e881058636eb0b29678ac1be 956 Pfam PF00196 Bacterial regulatory proteins, luxR family 897 950 1.4E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2245 17ee6e74e881058636eb0b29678ac1be 956 SUPERFAMILY SSF46894 887 952 2.14E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_2245 17ee6e74e881058636eb0b29678ac1be 956 Gene3D G3DSA:1.25.40.10 449 724 3.7E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2245 17ee6e74e881058636eb0b29678ac1be 956 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 928 940 9.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2245 17ee6e74e881058636eb0b29678ac1be 956 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 912 928 9.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2245 17ee6e74e881058636eb0b29678ac1be 956 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 898 912 9.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_2245 17ee6e74e881058636eb0b29678ac1be 956 SUPERFAMILY SSF48452 753 862 9.21E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4355 98845be59ea3d8977927f5b9c9c8b3c4 475 Gene3D G3DSA:3.40.50.12780 6 376 2.0E-71 T 14-10-2018 Amir_4355 98845be59ea3d8977927f5b9c9c8b3c4 475 ProSitePatterns PS00455 Putative AMP-binding domain signature. 140 151 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4355 98845be59ea3d8977927f5b9c9c8b3c4 475 Gene3D G3DSA:3.30.300.30 377 474 7.3E-21 T 14-10-2018 Amir_4355 98845be59ea3d8977927f5b9c9c8b3c4 475 SUPERFAMILY SSF56801 9 473 3.79E-100 T 14-10-2018 Amir_4355 98845be59ea3d8977927f5b9c9c8b3c4 475 Pfam PF00501 AMP-binding enzyme 16 382 5.2E-63 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4355 98845be59ea3d8977927f5b9c9c8b3c4 475 Pfam PF13193 AMP-binding enzyme C-terminal domain 392 466 1.0E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_1626 b8b23b56c00fea52b1ae3abe0b759b56 262 Pfam PF13560 Helix-turn-helix domain 7 54 7.0E-7 T 14-10-2018 Amir_1626 b8b23b56c00fea52b1ae3abe0b759b56 262 SUPERFAMILY SSF47413 5 53 1.05E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3729 b6b4faf503a55d5a1643bcbe3c22ddc5 440 SUPERFAMILY SSF51735 12 131 2.75E-10 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3729 b6b4faf503a55d5a1643bcbe3c22ddc5 440 SMART SM00858 345 413 0.0057 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Amir_3729 b6b4faf503a55d5a1643bcbe3c22ddc5 440 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 70 129 3.5E-5 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Amir_3729 b6b4faf503a55d5a1643bcbe3c22ddc5 440 Gene3D G3DSA:3.40.50.720 5 134 2.4E-11 T 14-10-2018 Amir_6413 dd8cad1478539c67a641f335de35c56b 141 Pfam PF15588 Immunity protein 10 19 94 6.5E-12 T 14-10-2018 IPR028962 Immunity protein 10 Amir_2290 7d93d7c2e7a809fd115dff835e4952d8 261 Pfam PF12822 ECF transporter, substrate-specific component 76 240 6.2E-19 T 14-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 Amir_2290 7d93d7c2e7a809fd115dff835e4952d8 261 Gene3D G3DSA:1.10.1760.20 72 254 1.5E-6 T 14-10-2018 Amir_2290 7d93d7c2e7a809fd115dff835e4952d8 261 PIRSF PIRSF037395 6 261 4.5E-95 T 14-10-2018 IPR017196 ECF transporter, predicted substrate-specific component UCP037395 Amir_5647 ddf4020a32f3cf7b9ed1460036e2953a 410 Pfam PF00589 Phage integrase family 208 379 5.0E-8 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amir_5647 ddf4020a32f3cf7b9ed1460036e2953a 410 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 77 129 2.2E-7 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Amir_5647 ddf4020a32f3cf7b9ed1460036e2953a 410 SUPERFAMILY SSF56349 77 379 3.3E-44 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amir_5647 ddf4020a32f3cf7b9ed1460036e2953a 410 Gene3D G3DSA:1.10.150.130 71 182 4.8E-20 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Amir_5647 ddf4020a32f3cf7b9ed1460036e2953a 410 Gene3D G3DSA:1.10.443.10 187 388 2.1E-26 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amir_6941 3105e8603c0fbfaf5d31ac4bebce3043 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.6E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6941 3105e8603c0fbfaf5d31ac4bebce3043 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.6E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6941 3105e8603c0fbfaf5d31ac4bebce3043 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.6E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6941 3105e8603c0fbfaf5d31ac4bebce3043 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.6E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6941 3105e8603c0fbfaf5d31ac4bebce3043 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.6E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6941 3105e8603c0fbfaf5d31ac4bebce3043 259 SUPERFAMILY SSF51735 4 221 5.97E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6941 3105e8603c0fbfaf5d31ac4bebce3043 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 182 0.0057 T 14-10-2018 Amir_6941 3105e8603c0fbfaf5d31ac4bebce3043 259 Pfam PF00106 short chain dehydrogenase 5 190 1.1E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6941 3105e8603c0fbfaf5d31ac4bebce3043 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6941 3105e8603c0fbfaf5d31ac4bebce3043 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6941 3105e8603c0fbfaf5d31ac4bebce3043 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6941 3105e8603c0fbfaf5d31ac4bebce3043 259 PIRSF PIRSF000126 2 258 1.9E-72 T 14-10-2018 Amir_6941 3105e8603c0fbfaf5d31ac4bebce3043 259 Gene3D G3DSA:3.40.50.720 2 254 2.0E-65 T 14-10-2018 Amir_5830 49201ffa0e3b0df4c9503e3e8de908c0 434 Pfam PF01554 MatE 234 382 8.8E-14 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amir_5830 49201ffa0e3b0df4c9503e3e8de908c0 434 Pfam PF01554 MatE 17 177 1.6E-25 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amir_5830 49201ffa0e3b0df4c9503e3e8de908c0 434 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 404 1.1E-88 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amir_6121 3ba45a5f0245e49ebae4b15f68961030 285 Gene3D G3DSA:1.10.260.40 4 72 1.1E-10 T 14-10-2018 Amir_6121 3ba45a5f0245e49ebae4b15f68961030 285 SUPERFAMILY SSF47413 11 72 2.82E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_6121 3ba45a5f0245e49ebae4b15f68961030 285 SMART SM00530 18 73 1.4E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_6121 3ba45a5f0245e49ebae4b15f68961030 285 Pfam PF13560 Helix-turn-helix domain 14 75 7.9E-13 T 14-10-2018 Amir_4609 ed31d5ce3ea9f37e1526211ad573087f 427 Pfam PF13416 Bacterial extracellular solute-binding protein 61 353 1.4E-14 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_4609 ed31d5ce3ea9f37e1526211ad573087f 427 SUPERFAMILY SSF53850 25 405 1.15E-38 T 14-10-2018 Amir_4609 ed31d5ce3ea9f37e1526211ad573087f 427 Gene3D G3DSA:3.40.190.10 51 365 2.4E-120 T 14-10-2018 Amir_4609 ed31d5ce3ea9f37e1526211ad573087f 427 Gene3D G3DSA:3.40.190.10 156 409 2.4E-120 T 14-10-2018 Amir_0832 d886db92c7ae5c2152a381bc333084b7 344 Pfam PF11350 Protein of unknown function (DUF3152) 134 340 1.9E-70 T 14-10-2018 IPR022603 Domain of unknown function DUF3152 Amir_0832 d886db92c7ae5c2152a381bc333084b7 344 Gene3D G3DSA:3.40.390.10 179 324 1.9E-5 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Amir_0832 d886db92c7ae5c2152a381bc333084b7 344 SUPERFAMILY SSF55486 164 312 5.31E-18 T 14-10-2018 Amir_2945 f70b87fae6c28754b9f1158906273fd9 589 Gene3D G3DSA:2.40.50.230 371 462 2.8E-12 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily Amir_2945 f70b87fae6c28754b9f1158906273fd9 589 Pfam PF05954 Phage late control gene D protein (GPD) 63 345 9.8E-17 T 14-10-2018 Amir_2945 f70b87fae6c28754b9f1158906273fd9 589 SUPERFAMILY SSF69279 35 187 3.02E-19 T 14-10-2018 Amir_2945 f70b87fae6c28754b9f1158906273fd9 589 Gene3D G3DSA:2.30.110.50 64 344 4.8E-6 T 14-10-2018 Amir_2945 f70b87fae6c28754b9f1158906273fd9 589 Gene3D G3DSA:3.55.50.10 108 194 4.8E-6 T 14-10-2018 Amir_2945 f70b87fae6c28754b9f1158906273fd9 589 Gene3D G3DSA:3.30.1920.30 229 303 4.8E-6 T 14-10-2018 Amir_2945 f70b87fae6c28754b9f1158906273fd9 589 SUPERFAMILY SSF69255 378 458 2.88E-13 T 14-10-2018 Amir_5208 10a1becc92eabadb228649f4daeebbc5 136 SUPERFAMILY SSF50022 14 135 1.26E-23 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Amir_5208 10a1becc92eabadb228649f4daeebbc5 136 Gene3D G3DSA:2.102.10.10 42 136 8.2E-19 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Amir_5208 10a1becc92eabadb228649f4daeebbc5 136 Pfam PF00355 Rieske [2Fe-2S] domain 46 124 4.6E-11 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Amir_0997 823927c3cc445fe2c7d2c3e4a5c24379 450 SUPERFAMILY SSF53448 51 325 1.88E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0997 823927c3cc445fe2c7d2c3e4a5c24379 450 Gene3D G3DSA:3.90.550.10 49 298 9.0E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0997 823927c3cc445fe2c7d2c3e4a5c24379 450 Pfam PF13641 Glycosyltransferase like family 2 51 299 7.3E-24 T 14-10-2018 Amir_0924 ff7779ecbec66a4a354d73a21b3bf8d7 399 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 90 132 2.0E-5 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Amir_0924 ff7779ecbec66a4a354d73a21b3bf8d7 399 SUPERFAMILY SSF56349 76 379 5.59E-47 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amir_0924 ff7779ecbec66a4a354d73a21b3bf8d7 399 Pfam PF00589 Phage integrase family 198 375 1.5E-17 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amir_0924 ff7779ecbec66a4a354d73a21b3bf8d7 399 Gene3D G3DSA:1.10.443.10 182 391 1.3E-35 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amir_0924 ff7779ecbec66a4a354d73a21b3bf8d7 399 Gene3D G3DSA:1.10.150.130 72 181 3.8E-20 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Amir_1856 8fc74b77a42b1c1250b77476c1eba5ab 739 Pfam PF04616 Glycosyl hydrolases family 43 479 685 1.3E-12 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Amir_1856 8fc74b77a42b1c1250b77476c1eba5ab 739 SUPERFAMILY SSF49899 29 236 3.06E-21 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_1856 8fc74b77a42b1c1250b77476c1eba5ab 739 SUPERFAMILY SSF75005 476 727 6.02E-33 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_1856 8fc74b77a42b1c1250b77476c1eba5ab 739 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 78 235 5.7E-16 T 14-10-2018 Amir_1856 8fc74b77a42b1c1250b77476c1eba5ab 739 Gene3D G3DSA:2.115.10.20 467 730 7.7E-29 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_1856 8fc74b77a42b1c1250b77476c1eba5ab 739 Gene3D G3DSA:2.60.120.200 35 239 3.6E-20 T 14-10-2018 Amir_3225 55724260b49eccfa6ac5012269726ded 240 Gene3D G3DSA:3.40.50.720 7 232 3.5E-38 T 14-10-2018 Amir_3225 55724260b49eccfa6ac5012269726ded 240 SUPERFAMILY SSF51735 9 219 1.29E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3225 55724260b49eccfa6ac5012269726ded 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 4.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3225 55724260b49eccfa6ac5012269726ded 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3225 55724260b49eccfa6ac5012269726ded 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 4.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3225 55724260b49eccfa6ac5012269726ded 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 238 240 4.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3225 55724260b49eccfa6ac5012269726ded 240 Pfam PF00106 short chain dehydrogenase 10 193 2.1E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6828 b850813697f5867404dda59758b0de0b 281 Gene3D G3DSA:3.40.250.10 1 142 1.1E-40 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_6828 b850813697f5867404dda59758b0de0b 281 SUPERFAMILY SSF52821 5 140 3.8E-35 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_6828 b850813697f5867404dda59758b0de0b 281 SMART SM00450 8 122 5.5E-22 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_6828 b850813697f5867404dda59758b0de0b 281 SMART SM00450 144 271 1.1E-19 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_6828 b850813697f5867404dda59758b0de0b 281 Gene3D G3DSA:3.40.250.10 143 276 5.7E-42 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_6828 b850813697f5867404dda59758b0de0b 281 SUPERFAMILY SSF52821 149 276 1.57E-34 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_6828 b850813697f5867404dda59758b0de0b 281 Pfam PF00581 Rhodanese-like domain 149 266 4.1E-17 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_6828 b850813697f5867404dda59758b0de0b 281 Pfam PF00581 Rhodanese-like domain 9 118 4.6E-15 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_6828 b850813697f5867404dda59758b0de0b 281 ProSitePatterns PS00380 Rhodanese signature 1. 34 45 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Amir_6828 b850813697f5867404dda59758b0de0b 281 ProSitePatterns PS00683 Rhodanese C-terminal signature. 255 265 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Amir_5419 64c53c822cd982426bb41c8cb1f70620 345 Gene3D G3DSA:3.40.190.10 46 171 8.9E-17 T 14-10-2018 Amir_5419 64c53c822cd982426bb41c8cb1f70620 345 Gene3D G3DSA:3.40.190.10 172 342 1.3E-26 T 14-10-2018 Amir_5419 64c53c822cd982426bb41c8cb1f70620 345 SUPERFAMILY SSF53850 54 279 8.02E-38 T 14-10-2018 Amir_5419 64c53c822cd982426bb41c8cb1f70620 345 Pfam PF09084 NMT1/THI5 like 68 279 7.1E-26 T 14-10-2018 IPR015168 SsuA/THI5-like Amir_1327 7a74bc008dd286915f5c468380ba7f0a 311 Gene3D G3DSA:3.30.70.250 131 194 1.8E-84 T 14-10-2018 Amir_1327 7a74bc008dd286915f5c468380ba7f0a 311 Gene3D G3DSA:3.40.366.10 8 284 1.8E-84 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_1327 7a74bc008dd286915f5c468380ba7f0a 311 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 10 296 5.7E-14 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amir_1327 7a74bc008dd286915f5c468380ba7f0a 311 Pfam PF00698 Acyl transferase domain 12 287 4.6E-28 T 14-10-2018 IPR014043 Acyl transferase Amir_1327 7a74bc008dd286915f5c468380ba7f0a 311 SUPERFAMILY SSF52151 7 308 7.85E-61 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_1327 7a74bc008dd286915f5c468380ba7f0a 311 SUPERFAMILY SSF55048 133 185 1.05E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amir_5881 89b9a43a88ba73380763c11c81a18335 304 SUPERFAMILY SSF53850 89 300 7.44E-39 T 14-10-2018 Amir_5881 89b9a43a88ba73380763c11c81a18335 304 SUPERFAMILY SSF46785 1 112 3.69E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5881 89b9a43a88ba73380763c11c81a18335 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.9E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_5881 89b9a43a88ba73380763c11c81a18335 304 Gene3D G3DSA:1.10.10.10 1 91 4.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5881 89b9a43a88ba73380763c11c81a18335 304 Pfam PF03466 LysR substrate binding domain 88 296 5.7E-42 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_5881 89b9a43a88ba73380763c11c81a18335 304 Gene3D G3DSA:3.40.190.10 92 284 3.1E-46 T 14-10-2018 Amir_5881 89b9a43a88ba73380763c11c81a18335 304 Gene3D G3DSA:3.40.190.10 170 270 3.1E-46 T 14-10-2018 Amir_6437 8f3bb8377d202af11b8d71dde8259311 715 SUPERFAMILY SSF52540 43 315 7.17E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6437 8f3bb8377d202af11b8d71dde8259311 715 Pfam PF00931 NB-ARC domain 74 319 5.3E-8 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 Amir_6437 8f3bb8377d202af11b8d71dde8259311 715 Gene3D G3DSA:1.25.40.10 470 710 1.6E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6437 8f3bb8377d202af11b8d71dde8259311 715 Pfam PF13424 Tetratricopeptide repeat 554 622 6.0E-9 T 14-10-2018 Amir_6437 8f3bb8377d202af11b8d71dde8259311 715 PRINTS PR00364 Disease resistance protein signature 244 258 2.3E-7 T 14-10-2018 Amir_6437 8f3bb8377d202af11b8d71dde8259311 715 PRINTS PR00364 Disease resistance protein signature 156 170 2.3E-7 T 14-10-2018 Amir_6437 8f3bb8377d202af11b8d71dde8259311 715 PRINTS PR00364 Disease resistance protein signature 78 93 2.3E-7 T 14-10-2018 Amir_6437 8f3bb8377d202af11b8d71dde8259311 715 Gene3D G3DSA:3.40.50.300 41 201 1.2E-25 T 14-10-2018 Amir_6437 8f3bb8377d202af11b8d71dde8259311 715 SUPERFAMILY SSF48452 550 708 7.83E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_1522 5f7b7ceff44eae34f66dd06816fa2e60 674 Pfam PF13520 Amino acid permease 52 459 1.0E-25 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amir_1522 5f7b7ceff44eae34f66dd06816fa2e60 674 Gene3D G3DSA:1.20.1740.10 48 501 1.5E-20 T 14-10-2018 Amir_2996 c76c6d8fac140a9b8dcd60a7c3f134fa 335 PRINTS PR00412 Epoxide hydrolase signature 144 157 2.1E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_2996 c76c6d8fac140a9b8dcd60a7c3f134fa 335 PRINTS PR00412 Epoxide hydrolase signature 310 332 2.1E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_2996 c76c6d8fac140a9b8dcd60a7c3f134fa 335 PRINTS PR00412 Epoxide hydrolase signature 80 98 2.1E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_2996 c76c6d8fac140a9b8dcd60a7c3f134fa 335 SUPERFAMILY SSF53474 48 334 9.82E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2996 c76c6d8fac140a9b8dcd60a7c3f134fa 335 Gene3D G3DSA:3.40.50.1820 52 334 5.2E-78 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2996 c76c6d8fac140a9b8dcd60a7c3f134fa 335 Pfam PF00561 alpha/beta hydrolase fold 75 164 6.4E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_1672 456cf89267c69971c0ba0356479a84f8 392 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 27 337 2.4E-122 T 14-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC Amir_1672 456cf89267c69971c0ba0356479a84f8 392 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 327 3.0E-31 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amir_1672 456cf89267c69971c0ba0356479a84f8 392 PRINTS PR00342 Rhesus blood group protein signature 172 187 9.4E-6 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Amir_1672 456cf89267c69971c0ba0356479a84f8 392 PRINTS PR00342 Rhesus blood group protein signature 111 127 9.4E-6 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Amir_1672 456cf89267c69971c0ba0356479a84f8 392 PRINTS PR00342 Rhesus blood group protein signature 289 307 9.4E-6 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Amir_1672 456cf89267c69971c0ba0356479a84f8 392 PRINTS PR00342 Rhesus blood group protein signature 15 33 9.4E-6 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Amir_0798 0d53ad0b2d0e1ed25269aa2d384a87a4 129 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 4.0E-11 T 14-10-2018 Amir_0798 0d53ad0b2d0e1ed25269aa2d384a87a4 129 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 41 59 4.0E-11 T 14-10-2018 Amir_0798 0d53ad0b2d0e1ed25269aa2d384a87a4 129 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 4.0E-11 T 14-10-2018 Amir_0798 0d53ad0b2d0e1ed25269aa2d384a87a4 129 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 2 123 14.326 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Amir_0798 0d53ad0b2d0e1ed25269aa2d384a87a4 129 Pfam PF02416 mttA/Hcf106 family 5 50 6.2E-7 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Amir_0798 0d53ad0b2d0e1ed25269aa2d384a87a4 129 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 4 84 6.1E-19 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Amir_5100 992acdff56d21f544249553e18626da2 129 SUPERFAMILY SSF50242 26 128 3.61E-17 T 14-10-2018 IPR008993 Tissue inhibitor of metalloproteinases-like, OB-fold Amir_5100 992acdff56d21f544249553e18626da2 129 Pfam PF00965 Tissue inhibitor of metalloproteinase 25 123 1.6E-6 T 14-10-2018 IPR001820 Protease inhibitor I35 (TIMP) GO:0008191 Amir_5100 992acdff56d21f544249553e18626da2 129 Gene3D G3DSA:2.40.50.120 26 129 1.2E-8 T 14-10-2018 Amir_6569 0c358207ff751058050689443481445e 643 Gene3D G3DSA:3.90.640.10 200 287 5.4E-87 T 14-10-2018 Amir_6569 0c358207ff751058050689443481445e 643 TIGRFAM TIGR03931 T7SS_Rv3446c: type VII secretion-associated protein, Rv3446c family 466 641 9.4E-23 T 14-10-2018 IPR023840 Type VII secretion system Rv3446c Amir_6569 0c358207ff751058050689443481445e 643 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Amir_6569 0c358207ff751058050689443481445e 643 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 309 323 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Amir_6569 0c358207ff751058050689443481445e 643 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.6E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_6569 0c358207ff751058050689443481445e 643 PRINTS PR00301 70kDa heat shock protein signature 174 184 3.6E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_6569 0c358207ff751058050689443481445e 643 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.6E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_6569 0c358207ff751058050689443481445e 643 PRINTS PR00301 70kDa heat shock protein signature 306 322 3.6E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_6569 0c358207ff751058050689443481445e 643 PRINTS PR00301 70kDa heat shock protein signature 337 357 3.6E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_6569 0c358207ff751058050689443481445e 643 Pfam PF00012 Hsp70 protein 94 349 1.6E-28 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_6569 0c358207ff751058050689443481445e 643 Gene3D G3DSA:3.30.420.40 5 348 5.4E-87 T 14-10-2018 Amir_6569 0c358207ff751058050689443481445e 643 SUPERFAMILY SSF53067 4 153 1.33E-21 T 14-10-2018 Amir_6569 0c358207ff751058050689443481445e 643 SUPERFAMILY SSF53067 165 350 1.44E-31 T 14-10-2018 Amir_6569 0c358207ff751058050689443481445e 643 Gene3D G3DSA:3.30.420.40 159 337 5.4E-87 T 14-10-2018 Amir_4622 164561553bbdfa407b8fe8b5d8d11f5e 258 SUPERFAMILY SSF51735 11 254 5.23E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4622 164561553bbdfa407b8fe8b5d8d11f5e 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4622 164561553bbdfa407b8fe8b5d8d11f5e 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4622 164561553bbdfa407b8fe8b5d8d11f5e 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4622 164561553bbdfa407b8fe8b5d8d11f5e 258 Gene3D G3DSA:3.40.50.720 6 258 3.7E-59 T 14-10-2018 Amir_4622 164561553bbdfa407b8fe8b5d8d11f5e 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 253 1.0E-36 T 14-10-2018 Amir_4622 164561553bbdfa407b8fe8b5d8d11f5e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 7.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4622 164561553bbdfa407b8fe8b5d8d11f5e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 7.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4622 164561553bbdfa407b8fe8b5d8d11f5e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 7.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4622 164561553bbdfa407b8fe8b5d8d11f5e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 7.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4622 164561553bbdfa407b8fe8b5d8d11f5e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 7.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4622 164561553bbdfa407b8fe8b5d8d11f5e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 7.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4622 164561553bbdfa407b8fe8b5d8d11f5e 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_6098 801f0b94d2fd523b62c270e10eae4cd2 218 SUPERFAMILY SSF46894 137 209 1.84E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_6098 801f0b94d2fd523b62c270e10eae4cd2 218 SUPERFAMILY SSF52172 2 128 1.57E-29 T 14-10-2018 IPR011006 CheY-like superfamily Amir_6098 801f0b94d2fd523b62c270e10eae4cd2 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6098 801f0b94d2fd523b62c270e10eae4cd2 218 Gene3D G3DSA:3.40.50.12740 3 211 1.4E-61 T 14-10-2018 Amir_6098 801f0b94d2fd523b62c270e10eae4cd2 218 Pfam PF00072 Response regulator receiver domain 5 118 8.6E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6098 801f0b94d2fd523b62c270e10eae4cd2 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 2.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6098 801f0b94d2fd523b62c270e10eae4cd2 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 2.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6098 801f0b94d2fd523b62c270e10eae4cd2 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 2.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6098 801f0b94d2fd523b62c270e10eae4cd2 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 5.1E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6098 801f0b94d2fd523b62c270e10eae4cd2 218 SMART SM00448 3 117 1.8E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6098 801f0b94d2fd523b62c270e10eae4cd2 218 SMART SM00421 149 206 2.5E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1896 e5a86da8827e32cd1ea36f0ab0058d3d 512 Pfam PF01381 Helix-turn-helix 17 65 4.6E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_1896 e5a86da8827e32cd1ea36f0ab0058d3d 512 SMART SM00530 16 71 3.2E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_1896 e5a86da8827e32cd1ea36f0ab0058d3d 512 Gene3D G3DSA:3.65.10.10 81 506 1.7E-117 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Amir_1896 e5a86da8827e32cd1ea36f0ab0058d3d 512 Gene3D G3DSA:3.65.10.10 96 308 1.7E-117 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Amir_1896 e5a86da8827e32cd1ea36f0ab0058d3d 512 SUPERFAMILY SSF47413 8 66 6.19E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1896 e5a86da8827e32cd1ea36f0ab0058d3d 512 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 82 499 1.8E-42 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Amir_1896 e5a86da8827e32cd1ea36f0ab0058d3d 512 Gene3D G3DSA:1.10.260.40 2 74 3.0E-14 T 14-10-2018 Amir_1896 e5a86da8827e32cd1ea36f0ab0058d3d 512 SUPERFAMILY SSF55205 78 509 8.67E-93 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Amir_6893 9da1776cdfad8a573e70b668c5f81797 171 Pfam PF08281 Sigma-70, region 4 110 156 1.8E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_6893 9da1776cdfad8a573e70b668c5f81797 171 Gene3D G3DSA:1.10.1740.10 2 80 8.7E-9 T 14-10-2018 Amir_6893 9da1776cdfad8a573e70b668c5f81797 171 Pfam PF04542 Sigma-70 region 2 17 79 3.6E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6893 9da1776cdfad8a573e70b668c5f81797 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 160 2.2E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_6893 9da1776cdfad8a573e70b668c5f81797 171 Gene3D G3DSA:1.10.10.10 81 163 2.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6893 9da1776cdfad8a573e70b668c5f81797 171 SUPERFAMILY SSF88659 88 162 1.27E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_6893 9da1776cdfad8a573e70b668c5f81797 171 SUPERFAMILY SSF88946 3 93 1.96E-15 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6893 9da1776cdfad8a573e70b668c5f81797 171 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 3 161 7.8E-47 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 Amir_2178 13bb92e7cd456e65378c824908912a07 325 Pfam PF13354 Beta-lactamase enzyme family 90 294 3.9E-27 T 14-10-2018 Amir_2178 13bb92e7cd456e65378c824908912a07 325 Gene3D G3DSA:3.40.710.10 67 323 2.4E-60 T 14-10-2018 Amir_2178 13bb92e7cd456e65378c824908912a07 325 SUPERFAMILY SSF56601 69 318 6.44E-57 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_2178 13bb92e7cd456e65378c824908912a07 325 PRINTS PR00118 Beta-lactamase class A signature 69 93 1.2E-55 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Amir_2178 13bb92e7cd456e65378c824908912a07 325 PRINTS PR00118 Beta-lactamase class A signature 100 117 1.2E-55 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Amir_2178 13bb92e7cd456e65378c824908912a07 325 PRINTS PR00118 Beta-lactamase class A signature 204 229 1.2E-55 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Amir_2178 13bb92e7cd456e65378c824908912a07 325 PRINTS PR00118 Beta-lactamase class A signature 178 202 1.2E-55 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Amir_2178 13bb92e7cd456e65378c824908912a07 325 PRINTS PR00118 Beta-lactamase class A signature 255 270 1.2E-55 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Amir_2178 13bb92e7cd456e65378c824908912a07 325 PRINTS PR00118 Beta-lactamase class A signature 142 167 1.2E-55 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Amir_0761 216a9a2860f96ca9ed5b654179af6b04 604 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 109 515 5.3E-45 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Amir_0761 216a9a2860f96ca9ed5b654179af6b04 604 Gene3D G3DSA:3.90.76.10 93 219 2.9E-72 T 14-10-2018 Amir_0761 216a9a2860f96ca9ed5b654179af6b04 604 Gene3D G3DSA:3.10.105.10 348 572 2.9E-72 T 14-10-2018 Amir_0761 216a9a2860f96ca9ed5b654179af6b04 604 Gene3D G3DSA:3.40.190.10 61 580 2.9E-72 T 14-10-2018 Amir_0761 216a9a2860f96ca9ed5b654179af6b04 604 PIRSF PIRSF002741 233 602 2.6E-35 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amir_0761 216a9a2860f96ca9ed5b654179af6b04 604 PIRSF PIRSF002741 94 233 2.0E-5 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amir_0761 216a9a2860f96ca9ed5b654179af6b04 604 SUPERFAMILY SSF53850 63 601 8.14E-63 T 14-10-2018 Amir_0652 56e96b6936b0fb10a9c58e142b4e662f 546 Gene3D G3DSA:3.40.50.12780 1 437 3.1E-104 T 14-10-2018 Amir_0652 56e96b6936b0fb10a9c58e142b4e662f 546 Pfam PF00501 AMP-binding enzyme 29 443 5.6E-60 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_0652 56e96b6936b0fb10a9c58e142b4e662f 546 Pfam PF14535 AMP-binding enzyme C-terminal domain 445 537 1.9E-6 T 14-10-2018 IPR028154 AMP-dependent ligase, C-terminal Amir_0652 56e96b6936b0fb10a9c58e142b4e662f 546 SUPERFAMILY SSF56801 27 542 7.85E-84 T 14-10-2018 Amir_0652 56e96b6936b0fb10a9c58e142b4e662f 546 Gene3D G3DSA:3.30.300.30 438 544 7.6E-25 T 14-10-2018 Amir_2758 0e4cddd09f0a5562631c48bd99c2647a 389 Gene3D G3DSA:3.30.565.10 267 388 2.5E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2758 0e4cddd09f0a5562631c48bd99c2647a 389 SMART SM00387 300 389 7.8E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2758 0e4cddd09f0a5562631c48bd99c2647a 389 SUPERFAMILY SSF55874 281 386 1.26E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2758 0e4cddd09f0a5562631c48bd99c2647a 389 Pfam PF07730 Histidine kinase 200 266 3.2E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 SUPERFAMILY SSF47384 602 680 7.85E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 722 846 2.1E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 SMART SM00388 612 680 6.6E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 PRINTS PR00344 Bacterial sensor protein C-terminal signature 775 789 8.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 PRINTS PR00344 Bacterial sensor protein C-terminal signature 808 826 8.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 PRINTS PR00344 Bacterial sensor protein C-terminal signature 832 845 8.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 PRINTS PR00344 Bacterial sensor protein C-terminal signature 793 803 8.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 Pfam PF13493 Domain of unknown function (DUF4118) 383 489 1.2E-27 T 14-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 Gene3D G3DSA:1.10.287.130 576 678 3.1E-14 T 14-10-2018 Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 SUPERFAMILY SSF55874 669 846 1.83E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 Gene3D G3DSA:3.40.50.620 219 356 2.3E-9 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 Pfam PF00582 Universal stress protein family 235 348 6.1E-7 T 14-10-2018 IPR006016 UspA Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 5 214 8.3E-99 T 14-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 SUPERFAMILY SSF52402 235 356 6.98E-13 T 14-10-2018 Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 Gene3D G3DSA:3.30.565.10 688 851 1.0E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 Gene3D G3DSA:3.40.50.300 3 213 4.1E-99 T 14-10-2018 Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 Gene3D G3DSA:1.20.120.620 378 483 7.6E-17 T 14-10-2018 IPR038318 KdpD, transmembrane domain superfamily Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 SMART SM00387 721 848 1.3E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_3228 dee0859c4cfe7a17d1d0fb0937d75c95 854 Pfam PF00512 His Kinase A (phospho-acceptor) domain 615 679 7.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_1674 2c591324752710664ba5ba8ae19eeac0 407 Pfam PF13433 Periplasmic binding protein domain 40 398 8.2E-154 T 14-10-2018 Amir_1674 2c591324752710664ba5ba8ae19eeac0 407 Gene3D G3DSA:3.40.50.2300 155 387 1.6E-147 T 14-10-2018 Amir_1674 2c591324752710664ba5ba8ae19eeac0 407 Gene3D G3DSA:3.40.50.2300 42 368 1.6E-147 T 14-10-2018 Amir_1674 2c591324752710664ba5ba8ae19eeac0 407 SUPERFAMILY SSF53822 39 400 3.83E-103 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_1674 2c591324752710664ba5ba8ae19eeac0 407 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 40 396 2.1E-173 T 14-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like Amir_4934 4d76db063f26eea284df9366565b01e2 515 Pfam PF00672 HAMP domain 218 266 8.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_4934 4d76db063f26eea284df9366565b01e2 515 SUPERFAMILY SSF55874 322 493 3.01E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4934 4d76db063f26eea284df9366565b01e2 515 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 490 2.1E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4934 4d76db063f26eea284df9366565b01e2 515 Gene3D G3DSA:3.30.565.10 335 488 1.2E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4934 4d76db063f26eea284df9366565b01e2 515 SMART SM00304 217 269 6.0E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_4934 4d76db063f26eea284df9366565b01e2 515 SMART SM00387 374 491 2.2E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4934 4d76db063f26eea284df9366565b01e2 515 SUPERFAMILY SSF47384 253 333 2.55E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_4934 4d76db063f26eea284df9366565b01e2 515 SMART SM00388 270 333 1.3E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_4934 4d76db063f26eea284df9366565b01e2 515 Pfam PF00512 His Kinase A (phospho-acceptor) domain 271 332 4.2E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_4934 4d76db063f26eea284df9366565b01e2 515 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 488 1.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4934 4d76db063f26eea284df9366565b01e2 515 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 429 1.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4934 4d76db063f26eea284df9366565b01e2 515 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 443 1.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4934 4d76db063f26eea284df9366565b01e2 515 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 469 1.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4934 4d76db063f26eea284df9366565b01e2 515 SUPERFAMILY SSF158472 219 266 7.19E-8 T 14-10-2018 Amir_4934 4d76db063f26eea284df9366565b01e2 515 Gene3D G3DSA:1.10.287.130 221 334 1.6E-31 T 14-10-2018 Amir_3672 6ab7ac9564817f44a353667c4a94271c 195 SMART SM00923 3 55 1.1E-24 T 14-10-2018 IPR005153 MbtH-like domain Amir_3672 6ab7ac9564817f44a353667c4a94271c 195 SUPERFAMILY SSF160582 3 72 1.7E-28 T 14-10-2018 IPR038020 MbtH-like domain superfamily Amir_3672 6ab7ac9564817f44a353667c4a94271c 195 Gene3D G3DSA:3.90.820.10 1 74 2.8E-32 T 14-10-2018 Amir_3672 6ab7ac9564817f44a353667c4a94271c 195 Pfam PF03621 MbtH-like protein 2 55 1.2E-23 T 14-10-2018 IPR005153 MbtH-like domain Amir_4240 3d156d05e89ad948c49f4a770d763bb0 301 Gene3D G3DSA:1.10.3720.10 47 296 2.8E-52 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4240 3d156d05e89ad948c49f4a770d763bb0 301 SUPERFAMILY SSF161098 51 287 7.46E-43 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4240 3d156d05e89ad948c49f4a770d763bb0 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 288 1.8E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_6885 dd1579901672359d415ac1b5e0296f55 286 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 72 175 2.1E-17 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Amir_6885 dd1579901672359d415ac1b5e0296f55 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 279 3.3E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_6885 dd1579901672359d415ac1b5e0296f55 286 SUPERFAMILY SSF161098 74 266 8.63E-33 T 14-10-2018 IPR035906 MetI-like superfamily Amir_6885 dd1579901672359d415ac1b5e0296f55 286 Gene3D G3DSA:1.10.3720.10 62 282 3.8E-43 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2263 06aaa662080d191d3319cce0d510951d 1115 SUPERFAMILY SSF48452 785 952 1.69E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2263 06aaa662080d191d3319cce0d510951d 1115 Gene3D G3DSA:1.25.40.10 697 961 3.0E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3174 42a5365fc8a714dfe1bde0544dd5b01f 750 ProSitePatterns PS00211 ABC transporters family signature. 647 661 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3174 42a5365fc8a714dfe1bde0544dd5b01f 750 Pfam PF00664 ABC transporter transmembrane region 190 461 1.1E-9 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_3174 42a5365fc8a714dfe1bde0544dd5b01f 750 Gene3D G3DSA:1.20.1560.10 159 496 6.5E-33 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_3174 42a5365fc8a714dfe1bde0544dd5b01f 750 SUPERFAMILY SSF52540 502 745 1.29E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3174 42a5365fc8a714dfe1bde0544dd5b01f 750 Pfam PF00005 ABC transporter 526 675 2.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3174 42a5365fc8a714dfe1bde0544dd5b01f 750 SUPERFAMILY SSF90123 172 494 1.57E-34 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_3174 42a5365fc8a714dfe1bde0544dd5b01f 750 SMART SM00382 535 721 7.6E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3174 42a5365fc8a714dfe1bde0544dd5b01f 750 Gene3D G3DSA:3.40.50.300 500 749 1.5E-89 T 14-10-2018 Amir_1447 a175b44bccd4511e9c33a13eff3bb3ec 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 220 2.9E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_1447 a175b44bccd4511e9c33a13eff3bb3ec 222 Gene3D G3DSA:1.10.10.10 126 222 3.9E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1447 a175b44bccd4511e9c33a13eff3bb3ec 222 Pfam PF00072 Response regulator receiver domain 3 109 2.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1447 a175b44bccd4511e9c33a13eff3bb3ec 222 SMART SM00862 148 220 6.6E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_1447 a175b44bccd4511e9c33a13eff3bb3ec 222 Gene3D G3DSA:3.40.50.2300 1 118 4.8E-31 T 14-10-2018 Amir_1447 a175b44bccd4511e9c33a13eff3bb3ec 222 SMART SM00448 1 109 2.0E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1447 a175b44bccd4511e9c33a13eff3bb3ec 222 SUPERFAMILY SSF52172 2 185 2.72E-32 T 14-10-2018 IPR011006 CheY-like superfamily Amir_3128 e54497632593a8940e7376c3774ed56c 309 SUPERFAMILY SSF46785 15 99 2.57E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3128 e54497632593a8940e7376c3774ed56c 309 SUPERFAMILY SSF53850 102 306 2.17E-31 T 14-10-2018 Amir_3128 e54497632593a8940e7376c3774ed56c 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 75 3.8E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3128 e54497632593a8940e7376c3774ed56c 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 1.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3128 e54497632593a8940e7376c3774ed56c 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 1.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3128 e54497632593a8940e7376c3774ed56c 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 1.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3128 e54497632593a8940e7376c3774ed56c 309 Gene3D G3DSA:3.40.190.10 107 306 1.3E-37 T 14-10-2018 Amir_3128 e54497632593a8940e7376c3774ed56c 309 Gene3D G3DSA:1.10.10.10 9 99 9.2E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3128 e54497632593a8940e7376c3774ed56c 309 Gene3D G3DSA:3.40.190.10 177 281 1.3E-37 T 14-10-2018 Amir_3128 e54497632593a8940e7376c3774ed56c 309 Pfam PF03466 LysR substrate binding domain 100 306 8.2E-31 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_0953 b10f02d64d0220d20835318385cac9f7 274 Pfam PF00583 Acetyltransferase (GNAT) family 168 256 5.3E-9 T 14-10-2018 IPR000182 GNAT domain Amir_0953 b10f02d64d0220d20835318385cac9f7 274 Gene3D G3DSA:3.40.630.30 133 259 2.2E-18 T 14-10-2018 Amir_0953 b10f02d64d0220d20835318385cac9f7 274 SUPERFAMILY SSF55729 136 265 5.59E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_7031 0ee528bf50fcb9605cccea2168d6fe3c 363 PIRSF PIRSF015578 1 363 1.4E-94 T 14-10-2018 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 Amir_7031 0ee528bf50fcb9605cccea2168d6fe3c 363 Gene3D G3DSA:3.40.50.720 8 356 2.7E-150 T 14-10-2018 Amir_7031 0ee528bf50fcb9605cccea2168d6fe3c 363 Pfam PF01658 Myo-inositol-1-phosphate synthase 195 303 1.9E-32 T 14-10-2018 IPR013021 Myo-inositol-1-phosphate synthase, GAPDH-like KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 Amir_7031 0ee528bf50fcb9605cccea2168d6fe3c 363 TIGRFAM TIGR03450 mycothiol_INO1: inositol 1-phosphate synthase 8 357 9.4E-212 T 14-10-2018 IPR017815 Myo-inositol 1-phosphate synthase, actinobacteria Amir_7031 0ee528bf50fcb9605cccea2168d6fe3c 363 Gene3D G3DSA:3.30.360.10 194 303 2.7E-150 T 14-10-2018 Amir_7031 0ee528bf50fcb9605cccea2168d6fe3c 363 SUPERFAMILY SSF55347 194 302 1.1E-34 T 14-10-2018 Amir_7031 0ee528bf50fcb9605cccea2168d6fe3c 363 SUPERFAMILY SSF51735 8 359 6.43E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3176 ff4e5535610a10a0bd5b2967604cb615 191 SUPERFAMILY SSF50370 47 128 1.66E-9 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_3176 ff4e5535610a10a0bd5b2967604cb615 191 Gene3D G3DSA:2.80.10.50 37 134 5.8E-11 T 14-10-2018 Amir_2162 9f17d438774c6809bf00c29890346ba3 348 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 5 292 7.7E-52 T 14-10-2018 IPR005693 Virulence factor Mce protein Amir_2162 9f17d438774c6809bf00c29890346ba3 348 Pfam PF02470 MlaD protein 31 106 1.8E-13 T 14-10-2018 IPR003399 Mce/MlaD Amir_5139 9792c5b9c98d90e0faa7a20fe955fbe9 192 SUPERFAMILY SSF53335 21 176 1.16E-9 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3807 61403ffbf4ce6db9cb5c6fdf3c5544b2 140 Pfam PF03259 Roadblock/LC7 domain 29 111 3.7E-8 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain Amir_3807 61403ffbf4ce6db9cb5c6fdf3c5544b2 140 Gene3D G3DSA:3.30.450.30 17 137 5.1E-18 T 14-10-2018 Amir_3807 61403ffbf4ce6db9cb5c6fdf3c5544b2 140 SMART SM00960 19 113 1.7E-7 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain Amir_3807 61403ffbf4ce6db9cb5c6fdf3c5544b2 140 SUPERFAMILY SSF103196 18 131 1.52E-13 T 14-10-2018 Amir_5098 5579be04ad30442848c30c9efc52990d 379 Pfam PF00296 Luciferase-like monooxygenase 62 351 2.3E-48 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_5098 5579be04ad30442848c30c9efc52990d 379 Gene3D G3DSA:3.20.20.30 61 379 1.1E-63 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_5098 5579be04ad30442848c30c9efc52990d 379 SUPERFAMILY SSF51679 61 378 1.91E-61 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_5098 5579be04ad30442848c30c9efc52990d 379 TIGRFAM TIGR03557 F420_G6P_family: F420-dependent oxidoreductase, G6PDH family 64 378 4.6E-150 T 14-10-2018 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related Amir_5895 a7003b58f3ccd899de466eaedd8e1720 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 248 1.5E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_5895 a7003b58f3ccd899de466eaedd8e1720 275 SUPERFAMILY SSF161098 3 255 2.34E-48 T 14-10-2018 IPR035906 MetI-like superfamily Amir_5895 a7003b58f3ccd899de466eaedd8e1720 275 Gene3D G3DSA:1.10.3720.10 6 259 4.8E-47 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1748 75c8a5b2ea67903331f4da99e2722995 282 Pfam PF11316 Putative rhamnosyl transferase 2 209 1.1E-42 T 14-10-2018 IPR021466 Putative rhamnosyl transferase Amir_0865 8db852fdecc14d97cdac2dcfcd7885ad 319 Gene3D G3DSA:3.90.79.20 51 177 4.3E-13 T 14-10-2018 Amir_0865 8db852fdecc14d97cdac2dcfcd7885ad 319 Gene3D G3DSA:3.90.79.10 179 317 4.1E-32 T 14-10-2018 Amir_0865 8db852fdecc14d97cdac2dcfcd7885ad 319 ProSitePatterns PS00893 Nudix box signature. 212 233 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_0865 8db852fdecc14d97cdac2dcfcd7885ad 319 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 145 176 4.5E-11 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 Amir_0865 8db852fdecc14d97cdac2dcfcd7885ad 319 Pfam PF00293 NUDIX domain 181 291 5.3E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_0865 8db852fdecc14d97cdac2dcfcd7885ad 319 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 57 143 2.5E-8 T 14-10-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 Amir_0865 8db852fdecc14d97cdac2dcfcd7885ad 319 SUPERFAMILY SSF55811 131 295 1.1E-42 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_3016 470e619656601589cc20fe6e4bfcd41e 275 Pfam PF08021 Siderophore-interacting FAD-binding domain 23 142 1.4E-30 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting Amir_3016 470e619656601589cc20fe6e4bfcd41e 275 Gene3D G3DSA:3.40.50.80 150 275 2.7E-34 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amir_3016 470e619656601589cc20fe6e4bfcd41e 275 Gene3D G3DSA:2.40.30.10 5 145 1.0E-33 T 14-10-2018 Amir_3016 470e619656601589cc20fe6e4bfcd41e 275 SUPERFAMILY SSF63380 17 149 5.24E-9 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amir_3016 470e619656601589cc20fe6e4bfcd41e 275 Pfam PF04954 Siderophore-interacting protein 154 270 2.3E-31 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain Amir_3831 777a9df1c53dc1303f3a67aa459486d1 438 Pfam PF01593 Flavin containing amine oxidoreductase 21 427 6.5E-39 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Amir_3831 777a9df1c53dc1303f3a67aa459486d1 438 SUPERFAMILY SSF51905 12 431 6.04E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3831 777a9df1c53dc1303f3a67aa459486d1 438 Gene3D G3DSA:3.90.660.20 49 106 8.6E-24 T 14-10-2018 Amir_3831 777a9df1c53dc1303f3a67aa459486d1 438 Gene3D G3DSA:3.50.50.60 205 409 1.1E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3831 777a9df1c53dc1303f3a67aa459486d1 438 SUPERFAMILY SSF54373 277 381 9.81E-11 T 14-10-2018 Amir_3831 777a9df1c53dc1303f3a67aa459486d1 438 Gene3D G3DSA:1.10.3110.10 107 179 8.6E-24 T 14-10-2018 Amir_3831 777a9df1c53dc1303f3a67aa459486d1 438 Gene3D G3DSA:3.90.660.20 204 382 1.1E-21 T 14-10-2018 Amir_3831 777a9df1c53dc1303f3a67aa459486d1 438 Gene3D G3DSA:3.50.50.60 14 48 8.6E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0277 15e151c728ca343f48c9790aa1a214bf 251 Pfam PF00482 Type II secretion system (T2SS), protein F 91 205 5.9E-8 T 14-10-2018 IPR018076 Type II secretion system F domain Amir_2879 1c4fe88418e1eb13f202d9715314c761 226 SUPERFAMILY SSF46689 12 82 4.26E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2879 1c4fe88418e1eb13f202d9715314c761 226 Gene3D G3DSA:1.10.10.60 4 79 4.3E-23 T 14-10-2018 Amir_2879 1c4fe88418e1eb13f202d9715314c761 226 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 88 224 4.3E-8 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 Amir_2879 1c4fe88418e1eb13f202d9715314c761 226 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 67 2.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2879 1c4fe88418e1eb13f202d9715314c761 226 Gene3D G3DSA:1.10.357.10 80 226 9.6E-35 T 14-10-2018 Amir_2879 1c4fe88418e1eb13f202d9715314c761 226 SUPERFAMILY SSF48498 83 224 8.89E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_1017 22f788b0f657ad4095a850e725d7461a 167 Pfam PF01814 Hemerythrin HHE cation binding domain 5 117 8.2E-10 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Amir_1017 22f788b0f657ad4095a850e725d7461a 167 Gene3D G3DSA:1.20.120.520 2 142 7.8E-8 T 14-10-2018 Amir_2603 91a7daf54e97e19d8a2856faf0c74f4a 88 SUPERFAMILY SSF88946 14 87 4.32E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_2603 91a7daf54e97e19d8a2856faf0c74f4a 88 Pfam PF04542 Sigma-70 region 2 22 84 4.2E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_2603 91a7daf54e97e19d8a2856faf0c74f4a 88 Gene3D G3DSA:1.10.1740.10 4 88 1.2E-10 T 14-10-2018 Amir_0141 43f916bea4ca4571e500223bc48e9664 506 Gene3D G3DSA:3.40.630.10 70 459 1.7E-76 T 14-10-2018 Amir_0141 43f916bea4ca4571e500223bc48e9664 506 Gene3D G3DSA:3.50.30.30 109 238 1.7E-76 T 14-10-2018 Amir_0141 43f916bea4ca4571e500223bc48e9664 506 Pfam PF04389 Peptidase family M28 246 462 2.9E-41 T 14-10-2018 IPR007484 Peptidase M28 Amir_0141 43f916bea4ca4571e500223bc48e9664 506 SUPERFAMILY SSF52025 126 222 1.15E-14 T 14-10-2018 Amir_0141 43f916bea4ca4571e500223bc48e9664 506 Pfam PF02225 PA domain 136 223 8.6E-16 T 14-10-2018 IPR003137 PA domain Amir_0141 43f916bea4ca4571e500223bc48e9664 506 SUPERFAMILY SSF53187 45 469 6.12E-58 T 14-10-2018 Amir_3767 f59b67b5cc003a2ed951968cc29f36fa 361 SUPERFAMILY SSF50129 3 186 9.28E-55 T 14-10-2018 IPR011032 GroES-like superfamily Amir_3767 f59b67b5cc003a2ed951968cc29f36fa 361 Pfam PF00107 Zinc-binding dehydrogenase 190 317 1.7E-30 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_3767 f59b67b5cc003a2ed951968cc29f36fa 361 Gene3D G3DSA:3.90.180.10 9 358 3.2E-119 T 14-10-2018 Amir_3767 f59b67b5cc003a2ed951968cc29f36fa 361 SUPERFAMILY SSF51735 154 326 6.54E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3767 f59b67b5cc003a2ed951968cc29f36fa 361 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 148 5.4E-28 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_3767 f59b67b5cc003a2ed951968cc29f36fa 361 TIGRFAM TIGR03451 mycoS_dep_FDH: S-(hydroxymethyl)mycothiol dehydrogenase 5 361 2.0E-207 T 14-10-2018 IPR017816 S-(hydroxymethyl)mycothiol dehydrogenase MetaCyc: PWY-7908 Amir_3767 f59b67b5cc003a2ed951968cc29f36fa 361 SMART SM00829 14 359 5.7E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_3767 f59b67b5cc003a2ed951968cc29f36fa 361 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amir_3767 f59b67b5cc003a2ed951968cc29f36fa 361 Gene3D G3DSA:3.40.50.720 167 304 3.2E-119 T 14-10-2018 Amir_3767 f59b67b5cc003a2ed951968cc29f36fa 361 SUPERFAMILY SSF50129 310 360 5.18E-8 T 14-10-2018 IPR011032 GroES-like superfamily Amir_6364 21b322a8eac8e16c92b9415a0c767842 398 SUPERFAMILY SSF56349 84 387 1.27E-44 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amir_6364 21b322a8eac8e16c92b9415a0c767842 398 Gene3D G3DSA:1.10.443.10 183 396 7.4E-35 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amir_6364 21b322a8eac8e16c92b9415a0c767842 398 Pfam PF00589 Phage integrase family 214 380 6.4E-14 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amir_6364 21b322a8eac8e16c92b9415a0c767842 398 Gene3D G3DSA:1.10.150.130 80 182 9.0E-17 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Amir_6364 21b322a8eac8e16c92b9415a0c767842 398 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 84 134 7.2E-6 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Amir_1895 714bb592b14cb5cfe4ff58e0e13ac0c9 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 270 288 5.7E-15 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_1895 714bb592b14cb5cfe4ff58e0e13ac0c9 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 5.7E-15 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_1895 714bb592b14cb5cfe4ff58e0e13ac0c9 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 5.7E-15 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_1895 714bb592b14cb5cfe4ff58e0e13ac0c9 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 5.7E-15 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_1895 714bb592b14cb5cfe4ff58e0e13ac0c9 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 11 33 5.7E-15 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_1895 714bb592b14cb5cfe4ff58e0e13ac0c9 342 Gene3D G3DSA:3.50.50.60 11 301 2.6E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1895 714bb592b14cb5cfe4ff58e0e13ac0c9 342 SUPERFAMILY SSF51905 6 305 1.48E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1895 714bb592b14cb5cfe4ff58e0e13ac0c9 342 Gene3D G3DSA:3.50.50.60 120 231 2.6E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1895 714bb592b14cb5cfe4ff58e0e13ac0c9 342 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 232 8.1E-13 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_1895 714bb592b14cb5cfe4ff58e0e13ac0c9 342 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 282 1.6E-9 T 14-10-2018 Amir_1895 714bb592b14cb5cfe4ff58e0e13ac0c9 342 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 1.6E-9 T 14-10-2018 Amir_1895 714bb592b14cb5cfe4ff58e0e13ac0c9 342 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.6E-9 T 14-10-2018 Amir_5336 a7f13e7a4b7cf72d78862a7a8e448251 368 Pfam PF00182 Chitinase class I 167 368 9.6E-42 T 14-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 Amir_5336 a7f13e7a4b7cf72d78862a7a8e448251 368 Gene3D G3DSA:1.10.530.70 164 359 2.1E-82 T 14-10-2018 Amir_5336 a7f13e7a4b7cf72d78862a7a8e448251 368 PIRSF PIRSF001060 3 368 1.3E-80 T 14-10-2018 IPR016283 Glycoside hydrolase, family 19 GO:0004568|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 Amir_5336 a7f13e7a4b7cf72d78862a7a8e448251 368 SUPERFAMILY SSF53955 164 368 7.87E-66 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Amir_6045 aa8e6e31222cd8575703e64c9221483b 362 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 344 5.1E-82 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Amir_6045 aa8e6e31222cd8575703e64c9221483b 362 Gene3D G3DSA:2.30.30.280 211 277 6.5E-10 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Amir_6045 aa8e6e31222cd8575703e64c9221483b 362 Pfam PF03054 tRNA methyl transferase 1 355 5.9E-109 T 14-10-2018 Amir_6045 aa8e6e31222cd8575703e64c9221483b 362 SUPERFAMILY SSF52402 1 243 6.84E-47 T 14-10-2018 Amir_6045 aa8e6e31222cd8575703e64c9221483b 362 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 358 36.109 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Amir_6045 aa8e6e31222cd8575703e64c9221483b 362 Gene3D G3DSA:2.40.30.10 278 361 6.7E-7 T 14-10-2018 Amir_6045 aa8e6e31222cd8575703e64c9221483b 362 Gene3D G3DSA:3.40.50.620 1 210 8.7E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_5983 d9d2c2920db7559966ca1cbd311c8197 172 Gene3D G3DSA:2.160.10.10 2 171 3.7E-49 T 14-10-2018 Amir_5983 d9d2c2920db7559966ca1cbd311c8197 172 SUPERFAMILY SSF51161 3 150 5.96E-40 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Amir_5983 d9d2c2920db7559966ca1cbd311c8197 172 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 71 103 5.5E-7 T 14-10-2018 IPR001451 Hexapeptide repeat Amir_5983 d9d2c2920db7559966ca1cbd311c8197 172 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 45 0.0029 T 14-10-2018 IPR001451 Hexapeptide repeat Amir_4939 4cfef13e9e55bdd2d3984ffec82fb4e8 292 Gene3D G3DSA:3.40.50.1820 16 292 1.3E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4939 4cfef13e9e55bdd2d3984ffec82fb4e8 292 SUPERFAMILY SSF53474 10 290 8.96E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4939 4cfef13e9e55bdd2d3984ffec82fb4e8 292 Pfam PF12697 Alpha/beta hydrolase family 21 286 3.5E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_2537 8b4ab3241231d85ce74091eb6d2f8237 411 SUPERFAMILY SSF103473 19 406 1.15E-42 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2537 8b4ab3241231d85ce74091eb6d2f8237 411 Gene3D G3DSA:1.20.1250.20 17 205 5.6E-21 T 14-10-2018 Amir_2537 8b4ab3241231d85ce74091eb6d2f8237 411 Gene3D G3DSA:1.20.1250.20 222 404 3.0E-14 T 14-10-2018 Amir_2537 8b4ab3241231d85ce74091eb6d2f8237 411 Pfam PF07690 Major Facilitator Superfamily 24 362 4.7E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2967 9a7b2d349560869df27a32557b16f539 384 Gene3D G3DSA:3.40.640.10 58 279 8.8E-109 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_2967 9a7b2d349560869df27a32557b16f539 384 Pfam PF00155 Aminotransferase class I and II 98 376 2.3E-26 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_2967 9a7b2d349560869df27a32557b16f539 384 Gene3D G3DSA:3.90.1150.10 20 376 8.8E-109 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_2967 9a7b2d349560869df27a32557b16f539 384 SUPERFAMILY SSF53383 22 381 1.93E-67 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_3342 6db68d6cfd9bade52d073fa6bea7e8de 154 Gene3D G3DSA:3.10.450.50 1 133 6.2E-23 T 14-10-2018 Amir_3342 6db68d6cfd9bade52d073fa6bea7e8de 154 SUPERFAMILY SSF54427 2 127 3.51E-15 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_3342 6db68d6cfd9bade52d073fa6bea7e8de 154 Pfam PF12680 SnoaL-like domain 2 119 2.2E-9 T 14-10-2018 IPR037401 SnoaL-like domain Amir_5249 254f03abaa559302f664cbe8ecf3fca8 187 SMART SM00841 129 184 4.6E-32 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Amir_5249 254f03abaa559302f664cbe8ecf3fca8 187 SMART SM01185 67 121 2.0E-25 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Amir_5249 254f03abaa559302f664cbe8ecf3fca8 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 5.6E-20 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Amir_5249 254f03abaa559302f664cbe8ecf3fca8 187 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Amir_5249 254f03abaa559302f664cbe8ecf3fca8 187 SUPERFAMILY SSF50249 129 185 1.88E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_5249 254f03abaa559302f664cbe8ecf3fca8 187 Gene3D G3DSA:2.30.30.30 1 62 1.2E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Amir_5249 254f03abaa559302f664cbe8ecf3fca8 187 Gene3D G3DSA:2.40.50.140 128 187 4.1E-25 T 14-10-2018 Amir_5249 254f03abaa559302f664cbe8ecf3fca8 187 TIGRFAM TIGR00038 efp: translation elongation factor P 3 185 1.7E-75 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Amir_5249 254f03abaa559302f664cbe8ecf3fca8 187 Pfam PF09285 Elongation factor P, C-terminal 129 184 8.2E-25 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Amir_5249 254f03abaa559302f664cbe8ecf3fca8 187 PIRSF PIRSF005901 1 186 7.2E-66 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP Amir_5249 254f03abaa559302f664cbe8ecf3fca8 187 SUPERFAMILY SSF50249 65 127 5.57E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_5249 254f03abaa559302f664cbe8ecf3fca8 187 SUPERFAMILY SSF50104 2 63 1.5E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Amir_5249 254f03abaa559302f664cbe8ecf3fca8 187 Hamap MF_00141 Elongation factor P [efp]. 1 185 48.747 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Amir_5249 254f03abaa559302f664cbe8ecf3fca8 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 1.1E-25 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like Amir_5249 254f03abaa559302f664cbe8ecf3fca8 187 Gene3D G3DSA:2.40.50.140 64 127 4.8E-22 T 14-10-2018 Amir_1057 6476fe3de0c29f1d890a087083a7242d 424 Gene3D G3DSA:1.20.1250.20 2 411 7.1E-47 T 14-10-2018 Amir_1057 6476fe3de0c29f1d890a087083a7242d 424 Pfam PF07690 Major Facilitator Superfamily 16 342 5.4E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_1057 6476fe3de0c29f1d890a087083a7242d 424 SUPERFAMILY SSF103473 6 410 5.75E-56 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_3608 d3b72b555f90d5aa41be8da02c7c9062 306 Gene3D G3DSA:3.40.50.720 6 305 1.0E-26 T 14-10-2018 Amir_3608 d3b72b555f90d5aa41be8da02c7c9062 306 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 213 3.1E-8 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_3608 d3b72b555f90d5aa41be8da02c7c9062 306 SUPERFAMILY SSF51735 6 303 4.66E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0852 41fda4195e30007c201ab69cf9813047 1050 Gene3D G3DSA:1.10.10.160 129 229 1.3E-42 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily Amir_0852 41fda4195e30007c201ab69cf9813047 1050 Gene3D G3DSA:3.40.50.300 348 708 4.1E-32 T 14-10-2018 Amir_0852 41fda4195e30007c201ab69cf9813047 1050 Gene3D G3DSA:3.40.50.300 26 304 1.3E-42 T 14-10-2018 Amir_0852 41fda4195e30007c201ab69cf9813047 1050 Gene3D G3DSA:3.90.320.10 873 1043 3.3E-5 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Amir_0852 41fda4195e30007c201ab69cf9813047 1050 Pfam PF12705 PD-(D/E)XK nuclease superfamily 794 1040 1.1E-37 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Amir_0852 41fda4195e30007c201ab69cf9813047 1050 Gene3D G3DSA:1.10.486.10 420 595 4.1E-32 T 14-10-2018 Amir_0852 41fda4195e30007c201ab69cf9813047 1050 SUPERFAMILY SSF52540 20 710 9.93E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0852 41fda4195e30007c201ab69cf9813047 1050 Pfam PF00580 UvrD/REP helicase N-terminal domain 24 305 1.1E-30 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Amir_0852 41fda4195e30007c201ab69cf9813047 1050 Pfam PF13361 UvrD-like helicase C-terminal domain 345 694 1.6E-16 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Amir_0809 1e74ac0a4f484f81b868073043b8d9e6 281 SUPERFAMILY SSF161098 15 281 1.21E-73 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0809 1e74ac0a4f484f81b868073043b8d9e6 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 274 3.2E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0809 1e74ac0a4f484f81b868073043b8d9e6 281 Gene3D G3DSA:1.10.3720.10 11 272 8.8E-66 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3063 da87494dc18abf9f4cf8adf9c7f4c612 304 SUPERFAMILY SSF53474 28 296 5.9E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3063 da87494dc18abf9f4cf8adf9c7f4c612 304 Pfam PF07859 alpha/beta hydrolase fold 70 275 7.4E-49 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 Amir_3063 da87494dc18abf9f4cf8adf9c7f4c612 304 Gene3D G3DSA:3.40.50.1820 4 285 1.9E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0022 f7b24a89185542a19a2dd6b0ab9209a3 567 Gene3D G3DSA:1.10.510.10 101 279 9.3E-48 T 14-10-2018 Amir_0022 f7b24a89185542a19a2dd6b0ab9209a3 567 Pfam PF00069 Protein kinase domain 13 261 5.9E-42 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_0022 f7b24a89185542a19a2dd6b0ab9209a3 567 SUPERFAMILY SSF56112 9 361 4.45E-71 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_0022 f7b24a89185542a19a2dd6b0ab9209a3 567 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 137 149 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_0022 f7b24a89185542a19a2dd6b0ab9209a3 567 Gene3D G3DSA:3.30.200.20 2 98 6.6E-33 T 14-10-2018 Amir_0022 f7b24a89185542a19a2dd6b0ab9209a3 567 SMART SM00220 12 272 4.4E-53 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_6399 2b8bc8d9ef8df12c2ea5a08c4a74431c 197 Pfam PF12079 Protein of unknown function (DUF3558) 16 190 1.5E-22 T 14-10-2018 IPR024520 Protein of unknown function DUF3558 Amir_6862 b22496a5217d7673af039b5b8536bd5d 654 SUPERFAMILY SSF53474 318 490 2.58E-7 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6862 b22496a5217d7673af039b5b8536bd5d 654 Pfam PF06259 Alpha/beta hydrolase 326 486 2.6E-27 T 14-10-2018 IPR010427 Protein of unknown function DUF1023 Amir_1870 56dc7de2ee0824b9b9bb98907b10f8aa 109 Gene3D G3DSA:3.30.70.100 1 94 1.3E-20 T 14-10-2018 Amir_1870 56dc7de2ee0824b9b9bb98907b10f8aa 109 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 1.2E-16 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Amir_1870 56dc7de2ee0824b9b9bb98907b10f8aa 109 SUPERFAMILY SSF54909 1 94 1.49E-25 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_4492 0a2858c2705a4848a8e0b2bc7e4fc8b9 649 Pfam PF16861 Carbamoyltransferase C-terminus 389 542 4.7E-52 T 14-10-2018 IPR031730 Carbamoyltransferase, C-terminal Amir_4492 0a2858c2705a4848a8e0b2bc7e4fc8b9 649 Gene3D G3DSA:3.30.420.350 108 323 4.2E-10 T 14-10-2018 Amir_4492 0a2858c2705a4848a8e0b2bc7e4fc8b9 649 Pfam PF02543 Carbamoyltransferase N-terminus 109 327 7.0E-6 T 14-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 Amir_4492 0a2858c2705a4848a8e0b2bc7e4fc8b9 649 Gene3D G3DSA:3.90.870.20 359 546 7.9E-57 T 14-10-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily Amir_3478 a5879aa22d590e65318024f1b7197681 356 Pfam PF00756 Putative esterase 80 317 1.1E-30 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Amir_3478 a5879aa22d590e65318024f1b7197681 356 SUPERFAMILY SSF53474 75 325 3.56E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3478 a5879aa22d590e65318024f1b7197681 356 Gene3D G3DSA:3.40.50.1820 43 330 7.8E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1933 e12ccb483e2339343d15a739cd7c8ef1 241 Gene3D G3DSA:1.10.10.10 140 241 7.1E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1933 e12ccb483e2339343d15a739cd7c8ef1 241 SUPERFAMILY SSF52172 18 143 1.18E-40 T 14-10-2018 IPR011006 CheY-like superfamily Amir_1933 e12ccb483e2339343d15a739cd7c8ef1 241 SMART SM00448 18 128 7.7E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1933 e12ccb483e2339343d15a739cd7c8ef1 241 SMART SM00862 161 237 2.6E-30 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_1933 e12ccb483e2339343d15a739cd7c8ef1 241 Gene3D G3DSA:3.40.50.2300 12 139 3.9E-37 T 14-10-2018 Amir_1933 e12ccb483e2339343d15a739cd7c8ef1 241 Pfam PF00072 Response regulator receiver domain 20 128 1.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1933 e12ccb483e2339343d15a739cd7c8ef1 241 SUPERFAMILY SSF46894 135 238 3.97E-31 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_1933 e12ccb483e2339343d15a739cd7c8ef1 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 237 1.8E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_5350 e91b5637d19b9e8bb935785d872965e4 299 Pfam PF12840 Helix-turn-helix domain 233 281 4.3E-10 T 14-10-2018 Amir_5350 e91b5637d19b9e8bb935785d872965e4 299 SMART SM00418 228 295 3.5E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_5350 e91b5637d19b9e8bb935785d872965e4 299 Gene3D G3DSA:1.10.10.10 217 296 4.4E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5350 e91b5637d19b9e8bb935785d872965e4 299 SUPERFAMILY SSF46785 229 295 1.6E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5185 bd1614269af7ff83a80284c0afc7c41f 307 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 18 295 3.2E-95 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Amir_5185 bd1614269af7ff83a80284c0afc7c41f 307 Pfam PF01040 UbiA prenyltransferase family 31 279 2.9E-62 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Amir_5185 bd1614269af7ff83a80284c0afc7c41f 307 Gene3D G3DSA:1.10.357.140 27 182 1.1E-16 T 14-10-2018 Amir_5185 bd1614269af7ff83a80284c0afc7c41f 307 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 297 18.764 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Amir_5185 bd1614269af7ff83a80284c0afc7c41f 307 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site Amir_6298 e017210de0b10964e85a7ab7e00b40cd 125 SUPERFAMILY SSF54593 2 122 3.09E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_6298 e017210de0b10964e85a7ab7e00b40cd 125 Gene3D G3DSA:3.10.180.10 4 125 6.1E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_6298 e017210de0b10964e85a7ab7e00b40cd 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 118 4.3E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amir_3339 29405396b30922f695a4b9cc35b5b669 279 Gene3D G3DSA:3.40.50.720 3 260 6.1E-62 T 14-10-2018 Amir_3339 29405396b30922f695a4b9cc35b5b669 279 Pfam PF13460 NAD(P)H-binding 6 179 2.3E-21 T 14-10-2018 IPR016040 NAD(P)-binding domain Amir_3339 29405396b30922f695a4b9cc35b5b669 279 Gene3D G3DSA:3.90.25.10 132 262 6.1E-62 T 14-10-2018 Amir_3339 29405396b30922f695a4b9cc35b5b669 279 SUPERFAMILY SSF51735 2 274 1.31E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5205 4af12d39b0dd5f4aa780927bd4785881 295 Gene3D G3DSA:3.40.50.300 46 167 2.7E-5 T 14-10-2018 Amir_5205 4af12d39b0dd5f4aa780927bd4785881 295 PIRSF PIRSF005052 11 295 2.0E-112 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 Amir_5205 4af12d39b0dd5f4aa780927bd4785881 295 Pfam PF03668 P-loop ATPase protein family 11 295 1.5E-109 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 Amir_5205 4af12d39b0dd5f4aa780927bd4785881 295 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 11 294 41.362 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 Amir_5205 4af12d39b0dd5f4aa780927bd4785881 295 SUPERFAMILY SSF52540 13 163 2.83E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6193 3b9d6cf2c9832dd0d0b3b5f5c219db89 352 Gene3D G3DSA:3.50.50.60 5 339 1.1E-104 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6193 3b9d6cf2c9832dd0d0b3b5f5c219db89 352 Gene3D G3DSA:3.30.9.10 83 297 1.1E-104 T 14-10-2018 Amir_6193 3b9d6cf2c9832dd0d0b3b5f5c219db89 352 SUPERFAMILY SSF54373 206 299 5.1E-15 T 14-10-2018 Amir_6193 3b9d6cf2c9832dd0d0b3b5f5c219db89 352 SUPERFAMILY SSF51905 4 344 9.06E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6193 3b9d6cf2c9832dd0d0b3b5f5c219db89 352 Pfam PF01266 FAD dependent oxidoreductase 5 335 2.8E-51 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Amir_1222 9c2f2ff9bcdba3e4b371c29f1c638e54 546 Pfam PF05960 Bacterial protein of unknown function (DUF885) 19 538 4.7E-133 T 14-10-2018 IPR010281 Protein of unknown function DUF885 Amir_1517 a9657fb3166847ce62bbd44d71ea340a 256 Gene3D G3DSA:3.40.50.1820 2 227 2.3E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1517 a9657fb3166847ce62bbd44d71ea340a 256 SUPERFAMILY SSF53474 42 221 1.99E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1732 2fbcf3e38ee9bd087561829b7fa6d6a3 200 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 19 185 6.0E-52 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Amir_1732 2fbcf3e38ee9bd087561829b7fa6d6a3 200 Gene3D G3DSA:2.60.120.10 13 196 6.2E-68 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_1732 2fbcf3e38ee9bd087561829b7fa6d6a3 200 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 15 186 1.8E-67 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Amir_1732 2fbcf3e38ee9bd087561829b7fa6d6a3 200 SUPERFAMILY SSF51182 13 191 7.81E-71 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_1732 2fbcf3e38ee9bd087561829b7fa6d6a3 200 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 18 186 1.5E-67 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Amir_6909 732e60200d39d08f4f0c67ee939115db 223 SUPERFAMILY SSF111331 34 116 3.49E-5 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Amir_6909 732e60200d39d08f4f0c67ee939115db 223 Gene3D G3DSA:3.40.50.10330 14 115 4.2E-6 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Amir_3216 c50e2a5509ad76c42edc16c2c5d96e4c 649 SMART SM00637 557 643 3.5E-22 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_3216 c50e2a5509ad76c42edc16c2c5d96e4c 649 SUPERFAMILY SSF49265 460 546 6.89E-16 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 Amir_3216 c50e2a5509ad76c42edc16c2c5d96e4c 649 Pfam PF00553 Cellulose binding domain 557 641 1.7E-15 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_3216 c50e2a5509ad76c42edc16c2c5d96e4c 649 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 54 393 9.9E-58 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 Amir_3216 c50e2a5509ad76c42edc16c2c5d96e4c 649 Gene3D G3DSA:2.60.40.10 460 546 4.4E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_3216 c50e2a5509ad76c42edc16c2c5d96e4c 649 Gene3D G3DSA:3.20.20.80 40 419 6.0E-106 T 14-10-2018 Amir_3216 c50e2a5509ad76c42edc16c2c5d96e4c 649 SUPERFAMILY SSF49384 553 647 9.07E-20 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_3216 c50e2a5509ad76c42edc16c2c5d96e4c 649 Gene3D G3DSA:2.60.40.290 551 649 3.1E-21 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_3216 c50e2a5509ad76c42edc16c2c5d96e4c 649 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 202 211 - T 14-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 Amir_3216 c50e2a5509ad76c42edc16c2c5d96e4c 649 SMART SM00060 462 535 5.3E-10 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 Amir_3216 c50e2a5509ad76c42edc16c2c5d96e4c 649 SUPERFAMILY SSF51445 43 422 2.28E-75 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1221 230641712423485aa69a6823506203ec 347 Pfam PF03060 Nitronate monooxygenase 8 329 2.4E-79 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Amir_1221 230641712423485aa69a6823506203ec 347 SUPERFAMILY SSF51412 6 339 1.25E-52 T 14-10-2018 Amir_1221 230641712423485aa69a6823506203ec 347 Gene3D G3DSA:3.20.20.70 1 340 6.6E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5057 065468d0014a98034385e1bcf68c6b57 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amir_5057 065468d0014a98034385e1bcf68c6b57 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 137 4.1E-22 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_5057 065468d0014a98034385e1bcf68c6b57 340 SUPERFAMILY SSF50129 1 178 1.11E-42 T 14-10-2018 IPR011032 GroES-like superfamily Amir_5057 065468d0014a98034385e1bcf68c6b57 340 SUPERFAMILY SSF51735 143 296 9.67E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5057 065468d0014a98034385e1bcf68c6b57 340 Pfam PF00107 Zinc-binding dehydrogenase 179 294 1.1E-14 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_5057 065468d0014a98034385e1bcf68c6b57 340 Gene3D G3DSA:3.40.50.720 156 285 1.7E-82 T 14-10-2018 Amir_5057 065468d0014a98034385e1bcf68c6b57 340 Gene3D G3DSA:3.90.180.10 8 323 1.7E-82 T 14-10-2018 Amir_1194 10c0d8edfe6033fb21e62892c07c42be 420 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 8 417 41.715 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Amir_1194 10c0d8edfe6033fb21e62892c07c42be 420 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 407 4.8E-143 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Amir_1194 10c0d8edfe6033fb21e62892c07c42be 420 SUPERFAMILY SSF53720 7 417 6.02E-115 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_1194 10c0d8edfe6033fb21e62892c07c42be 420 Gene3D G3DSA:3.40.309.10 229 375 6.6E-158 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_1194 10c0d8edfe6033fb21e62892c07c42be 420 PIRSF PIRSF000151 1 418 5.4E-170 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Amir_1194 10c0d8edfe6033fb21e62892c07c42be 420 Pfam PF00171 Aldehyde dehydrogenase family 6 287 1.3E-17 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_1194 10c0d8edfe6033fb21e62892c07c42be 420 Gene3D G3DSA:3.40.605.10 21 412 6.6E-158 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_1194 10c0d8edfe6033fb21e62892c07c42be 420 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 324 345 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Amir_2393 08ddbcb40026f8446580a0fc504b0348 157 SUPERFAMILY SSF46785 16 144 3.1E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2393 08ddbcb40026f8446580a0fc504b0348 157 Pfam PF12802 MarR family 39 97 2.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2393 08ddbcb40026f8446580a0fc504b0348 157 SMART SM00347 34 133 0.0068 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2393 08ddbcb40026f8446580a0fc504b0348 157 Gene3D G3DSA:1.10.10.10 7 148 7.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0315 aa0b4216a7984bc04116e9f90a5b72fd 261 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 1 254 6.0E-87 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Amir_0315 aa0b4216a7984bc04116e9f90a5b72fd 261 Pfam PF00809 Pterin binding enzyme 1 241 1.9E-79 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_0315 aa0b4216a7984bc04116e9f90a5b72fd 261 Gene3D G3DSA:3.20.20.20 1 260 1.9E-102 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_0315 aa0b4216a7984bc04116e9f90a5b72fd 261 SUPERFAMILY SSF51717 1 257 8.9E-88 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_0315 aa0b4216a7984bc04116e9f90a5b72fd 261 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 34 47 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amir_2887 e1abb5c43624d3a1b01f3701c0fe84e8 104 Gene3D G3DSA:1.10.3730.20 1 104 1.5E-26 T 14-10-2018 Amir_2887 e1abb5c43624d3a1b01f3701c0fe84e8 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 5.6E-21 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Amir_2887 e1abb5c43624d3a1b01f3701c0fe84e8 104 SUPERFAMILY SSF103481 6 101 1.44E-14 T 14-10-2018 Amir_2331 1ff78c298cf8479763204ddb52f8394c 293 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 242 263 2.3E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amir_2331 1ff78c298cf8479763204ddb52f8394c 293 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 113 133 2.3E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amir_2331 1ff78c298cf8479763204ddb52f8394c 293 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 266 291 2.3E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amir_2331 1ff78c298cf8479763204ddb52f8394c 293 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 94 113 2.3E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amir_2331 1ff78c298cf8479763204ddb52f8394c 293 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 133 152 2.3E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amir_2331 1ff78c298cf8479763204ddb52f8394c 293 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 221 241 2.3E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amir_2331 1ff78c298cf8479763204ddb52f8394c 293 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 269 281 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amir_2331 1ff78c298cf8479763204ddb52f8394c 293 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 214 226 1.0E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Amir_2331 1ff78c298cf8479763204ddb52f8394c 293 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 152 164 1.0E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Amir_2331 1ff78c298cf8479763204ddb52f8394c 293 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 92 101 1.0E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Amir_2331 1ff78c298cf8479763204ddb52f8394c 293 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 282 292 1.0E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Amir_2331 1ff78c298cf8479763204ddb52f8394c 293 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 164 178 1.0E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Amir_2331 1ff78c298cf8479763204ddb52f8394c 293 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 192 204 1.0E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Amir_2331 1ff78c298cf8479763204ddb52f8394c 293 Pfam PF00813 FliP family 97 288 1.1E-75 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amir_2331 1ff78c298cf8479763204ddb52f8394c 293 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 97 291 2.9E-75 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Amir_3769 c834203cc18bcb6854a1612e377cafae 400 Gene3D G3DSA:2.60.40.10 34 135 3.7E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_3769 c834203cc18bcb6854a1612e377cafae 400 SUPERFAMILY SSF50370 270 399 1.73E-23 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_3769 c834203cc18bcb6854a1612e377cafae 400 Gene3D G3DSA:2.80.10.50 314 400 1.3E-15 T 14-10-2018 Amir_3769 c834203cc18bcb6854a1612e377cafae 400 Gene3D G3DSA:2.80.10.50 241 313 2.9E-5 T 14-10-2018 Amir_3769 c834203cc18bcb6854a1612e377cafae 400 SMART SM00458 268 400 4.4E-6 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3769 c834203cc18bcb6854a1612e377cafae 400 Pfam PF00652 Ricin-type beta-trefoil lectin domain 271 397 1.5E-13 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3769 c834203cc18bcb6854a1612e377cafae 400 SUPERFAMILY SSF117074 26 109 4.84E-8 T 14-10-2018 Amir_1736 bbacf2c1cccbc0656eb4c53a9d09cac7 218 SUPERFAMILY SSF51161 69 215 3.6E-35 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Amir_1736 bbacf2c1cccbc0656eb4c53a9d09cac7 218 Gene3D G3DSA:2.160.10.10 89 217 7.6E-26 T 14-10-2018 Amir_1736 bbacf2c1cccbc0656eb4c53a9d09cac7 218 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 6 209 8.3E-52 T 14-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like Amir_1736 bbacf2c1cccbc0656eb4c53a9d09cac7 218 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 122 1.1E-4 T 14-10-2018 IPR001451 Hexapeptide repeat Amir_1736 bbacf2c1cccbc0656eb4c53a9d09cac7 218 Gene3D G3DSA:3.40.50.20 4 79 3.8E-9 T 14-10-2018 Amir_1736 bbacf2c1cccbc0656eb4c53a9d09cac7 218 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 169 197 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Amir_2321 e449e8c37f569b525910eb895fc3375b 394 PIRSF PIRSF000876 1 386 3.8E-124 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Amir_2321 e449e8c37f569b525910eb895fc3375b 394 SMART SM00448 2 117 4.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2321 e449e8c37f569b525910eb895fc3375b 394 Pfam PF01339 CheB methylesterase 200 378 8.2E-61 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Amir_2321 e449e8c37f569b525910eb895fc3375b 394 Pfam PF00072 Response regulator receiver domain 4 116 4.7E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2321 e449e8c37f569b525910eb895fc3375b 394 Gene3D G3DSA:3.40.50.180 192 387 1.7E-72 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal Amir_2321 e449e8c37f569b525910eb895fc3375b 394 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 383 37.856 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Amir_2321 e449e8c37f569b525910eb895fc3375b 394 SUPERFAMILY SSF52738 194 383 6.15E-67 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal Amir_2321 e449e8c37f569b525910eb895fc3375b 394 Gene3D G3DSA:3.40.50.12740 2 136 4.8E-33 T 14-10-2018 Amir_2321 e449e8c37f569b525910eb895fc3375b 394 SUPERFAMILY SSF52172 3 122 2.99E-31 T 14-10-2018 IPR011006 CheY-like superfamily Amir_1957 660bdf7c2a96508480d1667016f0f639 344 Gene3D G3DSA:1.10.287.950 174 341 2.3E-41 T 14-10-2018 Amir_1957 660bdf7c2a96508480d1667016f0f639 344 Gene3D G3DSA:3.30.450.20 46 124 4.1E-12 T 14-10-2018 Amir_1957 660bdf7c2a96508480d1667016f0f639 344 Pfam PF08447 PAS fold 79 168 9.6E-20 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Amir_1957 660bdf7c2a96508480d1667016f0f639 344 Gene3D G3DSA:2.10.70.100 130 173 4.4E-11 T 14-10-2018 Amir_1957 660bdf7c2a96508480d1667016f0f639 344 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 197 327 1.6E-31 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_1957 660bdf7c2a96508480d1667016f0f639 344 SUPERFAMILY SSF55785 74 176 3.66E-14 T 14-10-2018 IPR035965 PAS domain superfamily Amir_1957 660bdf7c2a96508480d1667016f0f639 344 SMART SM00086 133 175 0.0017 T 14-10-2018 IPR001610 PAC motif Amir_1957 660bdf7c2a96508480d1667016f0f639 344 SMART SM00283 146 344 6.0E-10 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_1957 660bdf7c2a96508480d1667016f0f639 344 SUPERFAMILY SSF58104 179 334 5.89E-46 T 14-10-2018 Amir_3871 50a3b52f7e93bfe7e08ebf9fb9b20d27 227 SUPERFAMILY SSF46894 124 223 1.11E-30 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_3871 50a3b52f7e93bfe7e08ebf9fb9b20d27 227 Pfam PF00072 Response regulator receiver domain 5 113 3.6E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3871 50a3b52f7e93bfe7e08ebf9fb9b20d27 227 Gene3D G3DSA:3.40.50.2300 1 126 5.8E-37 T 14-10-2018 Amir_3871 50a3b52f7e93bfe7e08ebf9fb9b20d27 227 SMART SM00862 147 223 7.2E-30 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_3871 50a3b52f7e93bfe7e08ebf9fb9b20d27 227 SMART SM00448 3 113 9.4E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3871 50a3b52f7e93bfe7e08ebf9fb9b20d27 227 SUPERFAMILY SSF52172 2 124 5.12E-40 T 14-10-2018 IPR011006 CheY-like superfamily Amir_3871 50a3b52f7e93bfe7e08ebf9fb9b20d27 227 Gene3D G3DSA:1.10.10.10 127 226 1.0E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3871 50a3b52f7e93bfe7e08ebf9fb9b20d27 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 223 2.5E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_2875 ddfd9d72d008e8d1daa44a7bf63bdaff 272 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_2875 ddfd9d72d008e8d1daa44a7bf63bdaff 272 Gene3D G3DSA:3.40.50.300 12 265 8.2E-67 T 14-10-2018 Amir_2875 ddfd9d72d008e8d1daa44a7bf63bdaff 272 SMART SM00382 40 226 5.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2875 ddfd9d72d008e8d1daa44a7bf63bdaff 272 Pfam PF00005 ABC transporter 32 178 2.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2875 ddfd9d72d008e8d1daa44a7bf63bdaff 272 SUPERFAMILY SSF52540 9 239 3.2E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_7077 434a079759aa6715bdaaf98ae764cdd9 436 Gene3D G3DSA:1.20.1250.20 27 420 6.2E-27 T 14-10-2018 Amir_7077 434a079759aa6715bdaaf98ae764cdd9 436 SUPERFAMILY SSF103473 56 425 3.01E-24 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_7077 434a079759aa6715bdaaf98ae764cdd9 436 Pfam PF07690 Major Facilitator Superfamily 56 390 1.1E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_6882 bc9cfba4866776b30ea50bfb979fb6c7 219 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 38 135 3.2E-10 T 14-10-2018 IPR018763 Protein of unknown function DUF2334 Amir_6882 bc9cfba4866776b30ea50bfb979fb6c7 219 SUPERFAMILY SSF88713 25 139 1.82E-5 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Amir_2473 3e987be7f5af642499e1e8362764f470 356 Gene3D G3DSA:3.30.70.360 167 273 1.3E-69 T 14-10-2018 Amir_2473 3e987be7f5af642499e1e8362764f470 356 Gene3D G3DSA:3.40.630.10 12 339 1.3E-69 T 14-10-2018 Amir_2473 3e987be7f5af642499e1e8362764f470 356 Pfam PF01546 Peptidase family M20/M25/M40 69 353 6.4E-28 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Amir_2473 3e987be7f5af642499e1e8362764f470 356 Pfam PF07687 Peptidase dimerisation domain 165 250 2.0E-11 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Amir_2473 3e987be7f5af642499e1e8362764f470 356 SUPERFAMILY SSF55031 167 250 1.05E-14 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amir_2473 3e987be7f5af642499e1e8362764f470 356 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 68 77 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Amir_2473 3e987be7f5af642499e1e8362764f470 356 SUPERFAMILY SSF53187 3 353 5.53E-40 T 14-10-2018 Amir_3304 21aee2e81a5cf32cdf1c4a742eb9fc75 358 Pfam PF13377 Periplasmic binding protein-like domain 188 352 2.8E-30 T 14-10-2018 Amir_3304 21aee2e81a5cf32cdf1c4a742eb9fc75 358 SUPERFAMILY SSF47413 18 68 8.34E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3304 21aee2e81a5cf32cdf1c4a742eb9fc75 358 SMART SM00354 17 87 2.0E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_3304 21aee2e81a5cf32cdf1c4a742eb9fc75 358 Gene3D G3DSA:3.40.50.2300 92 337 9.9E-57 T 14-10-2018 Amir_3304 21aee2e81a5cf32cdf1c4a742eb9fc75 358 Pfam PF00356 Bacterial regulatory proteins, lacI family 19 66 3.8E-8 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_3304 21aee2e81a5cf32cdf1c4a742eb9fc75 358 SUPERFAMILY SSF53822 90 353 6.21E-50 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_3304 21aee2e81a5cf32cdf1c4a742eb9fc75 358 Gene3D G3DSA:1.10.260.40 10 78 1.8E-12 T 14-10-2018 Amir_3304 21aee2e81a5cf32cdf1c4a742eb9fc75 358 Gene3D G3DSA:3.40.50.2300 177 312 9.9E-57 T 14-10-2018 Amir_3589 238922fc9c017f40e815ecc237d4b73a 232 Gene3D G3DSA:1.10.1760.20 1 206 4.4E-47 T 14-10-2018 Amir_3589 238922fc9c017f40e815ecc237d4b73a 232 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 1 214 26.723 T 14-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 Amir_3589 238922fc9c017f40e815ecc237d4b73a 232 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 204 9.6E-45 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 Amir_3589 238922fc9c017f40e815ecc237d4b73a 232 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 1 202 7.6E-77 T 14-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 Amir_5132 e6a0ef9d6b1293f3563e2171522e379b 269 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Amir_5132 e6a0ef9d6b1293f3563e2171522e379b 269 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 254 3.1E-39 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Amir_5132 e6a0ef9d6b1293f3563e2171522e379b 269 Gene3D G3DSA:3.90.226.10 6 222 3.6E-61 T 14-10-2018 Amir_5132 e6a0ef9d6b1293f3563e2171522e379b 269 SUPERFAMILY SSF52096 17 260 6.97E-59 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_2715 86228a45aa3619b5acf536d9a96a8cb4 301 Pfam PF00296 Luciferase-like monooxygenase 10 277 9.1E-55 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_2715 86228a45aa3619b5acf536d9a96a8cb4 301 Gene3D G3DSA:3.20.20.30 8 299 9.8E-60 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_2715 86228a45aa3619b5acf536d9a96a8cb4 301 SUPERFAMILY SSF51679 1 298 5.63E-60 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_2715 86228a45aa3619b5acf536d9a96a8cb4 301 TIGRFAM TIGR03564 F420_MSMEG_4879: F420-dependent oxidoreductase, MSMEG_4879 family 19 280 8.1E-101 T 14-10-2018 IPR019910 Luciferase-like, F420-dependent oxidoreductase, MSMEG4879, predicted Amir_5965 54400f27dbe669b4284a4040b536f8f1 60 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 57 6.5E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5965 54400f27dbe669b4284a4040b536f8f1 60 SUPERFAMILY SSF57829 2 57 8.55E-17 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Amir_5965 54400f27dbe669b4284a4040b536f8f1 60 Pfam PF01783 Ribosomal L32p protein family 2 58 5.2E-22 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5965 54400f27dbe669b4284a4040b536f8f1 60 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 2 57 16.766 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_1792 ece4bfc58d97fddc1d3c751cb8f1149d 75 Pfam PF06305 Lipopolysaccharide assembly protein A domain 16 67 1.0E-11 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 Amir_0156 2539e9d1bd66e3267d33a45b8496fc1b 279 Gene3D G3DSA:3.40.50.720 4 274 1.4E-62 T 14-10-2018 Amir_0156 2539e9d1bd66e3267d33a45b8496fc1b 279 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 207 8.0E-38 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_0156 2539e9d1bd66e3267d33a45b8496fc1b 279 SUPERFAMILY SSF51735 1 270 9.67E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0304 b2ced087b993aabc93288bca2b8bb7fe 148 Gene3D G3DSA:3.10.129.10 1 145 1.2E-28 T 14-10-2018 Amir_0304 b2ced087b993aabc93288bca2b8bb7fe 148 Pfam PF14539 Domain of unknown function (DUF4442) 5 143 1.4E-22 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 Amir_0304 b2ced087b993aabc93288bca2b8bb7fe 148 SUPERFAMILY SSF54637 4 146 2.16E-16 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_1199 072907bfcbcf864289ac841c2d9266f0 204 PIRSF PIRSF000709 3 172 1.9E-9 T 14-10-2018 Amir_1199 072907bfcbcf864289ac841c2d9266f0 204 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Amir_1199 072907bfcbcf864289ac841c2d9266f0 204 SUPERFAMILY SSF53254 1 200 2.36E-52 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_1199 072907bfcbcf864289ac841c2d9266f0 204 SMART SM00855 5 157 3.0E-21 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_1199 072907bfcbcf864289ac841c2d9266f0 204 Gene3D G3DSA:3.40.50.1240 1 204 5.1E-62 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_1199 072907bfcbcf864289ac841c2d9266f0 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 199 5.3E-50 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_4619 36916c48f01429f61575201aaa499b92 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 29 266 8.4E-56 T 14-10-2018 Amir_4619 36916c48f01429f61575201aaa499b92 267 Gene3D G3DSA:3.40.50.720 4 267 1.7E-74 T 14-10-2018 Amir_4619 36916c48f01429f61575201aaa499b92 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 4.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4619 36916c48f01429f61575201aaa499b92 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 4.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4619 36916c48f01429f61575201aaa499b92 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 4.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4619 36916c48f01429f61575201aaa499b92 267 SUPERFAMILY SSF51735 15 266 5.93E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4619 36916c48f01429f61575201aaa499b92 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 2.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4619 36916c48f01429f61575201aaa499b92 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 2.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4619 36916c48f01429f61575201aaa499b92 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 2.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4619 36916c48f01429f61575201aaa499b92 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 2.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4619 36916c48f01429f61575201aaa499b92 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 249 2.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4619 36916c48f01429f61575201aaa499b92 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 38 2.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4196 a8c21c261f9e75008b09e502699c261d 666 SUPERFAMILY SSF117074 242 329 2.09E-17 T 14-10-2018 Amir_4196 a8c21c261f9e75008b09e502699c261d 666 Pfam PF17210 SdrD B-like domain 256 367 1.7E-22 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_4196 a8c21c261f9e75008b09e502699c261d 666 Pfam PF17210 SdrD B-like domain 39 127 4.9E-10 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_4196 a8c21c261f9e75008b09e502699c261d 666 Pfam PF17210 SdrD B-like domain 161 232 2.5E-15 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_4196 a8c21c261f9e75008b09e502699c261d 666 SUPERFAMILY SSF117074 32 122 2.88E-12 T 14-10-2018 Amir_4196 a8c21c261f9e75008b09e502699c261d 666 Gene3D G3DSA:2.60.40.10 34 155 2.1E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_4196 a8c21c261f9e75008b09e502699c261d 666 Gene3D G3DSA:2.60.40.10 156 253 1.1E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_4196 a8c21c261f9e75008b09e502699c261d 666 Gene3D G3DSA:2.60.40.10 254 375 3.3E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_4196 a8c21c261f9e75008b09e502699c261d 666 SUPERFAMILY SSF117074 147 233 9.15E-16 T 14-10-2018 Amir_1356 2d44eebcb3be1d1d9e4b8b754e45d954 367 SUPERFAMILY SSF56752 13 363 2.62E-113 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Amir_1356 2d44eebcb3be1d1d9e4b8b754e45d954 367 Pfam PF01063 Amino-transferase class IV 75 321 7.5E-30 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Amir_1356 2d44eebcb3be1d1d9e4b8b754e45d954 367 ProSitePatterns PS00770 Aminotransferases class-IV signature. 239 272 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Amir_1356 2d44eebcb3be1d1d9e4b8b754e45d954 367 Gene3D G3DSA:3.30.470.10 30 362 3.0E-137 T 14-10-2018 Amir_1356 2d44eebcb3be1d1d9e4b8b754e45d954 367 Gene3D G3DSA:3.20.10.10 177 349 3.0E-137 T 14-10-2018 Amir_1356 2d44eebcb3be1d1d9e4b8b754e45d954 367 PIRSF PIRSF006468 7 367 2.3E-130 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 Amir_1356 2d44eebcb3be1d1d9e4b8b754e45d954 367 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 49 366 1.5E-135 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 Amir_2240 ef1a8d3cafad74bc66479da4d2110084 64 TIGRFAM TIGR03687 pupylate_cterm: ubiquitin-like protein Pup 33 64 2.2E-20 T 14-10-2018 IPR008515 Ubiquitin-like, Pup Amir_2240 ef1a8d3cafad74bc66479da4d2110084 64 Pfam PF05639 Pup-like protein 3 64 3.1E-22 T 14-10-2018 IPR008515 Ubiquitin-like, Pup Amir_2240 ef1a8d3cafad74bc66479da4d2110084 64 Hamap MF_02106 Prokaryotic ubiquitin-like protein Pup [pup]. 1 64 16.65 T 14-10-2018 IPR008515 Ubiquitin-like, Pup Amir_3646 71fc02cd24066fb950f1c7f0dabde34f 301 SUPERFAMILY SSF47413 74 131 2.82E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3646 71fc02cd24066fb950f1c7f0dabde34f 301 Gene3D G3DSA:1.10.260.40 66 133 1.0E-7 T 14-10-2018 Amir_3646 71fc02cd24066fb950f1c7f0dabde34f 301 Pfam PF13560 Helix-turn-helix domain 75 136 2.8E-11 T 14-10-2018 Amir_3646 71fc02cd24066fb950f1c7f0dabde34f 301 SMART SM00530 79 134 3.3E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_1343 82496a556eb54b5e76c10a698eb32aa2 332 Pfam PF13354 Beta-lactamase enzyme family 116 253 6.0E-6 T 14-10-2018 Amir_1343 82496a556eb54b5e76c10a698eb32aa2 332 SUPERFAMILY SSF56601 122 312 7.32E-7 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_1343 82496a556eb54b5e76c10a698eb32aa2 332 Gene3D G3DSA:3.40.710.10 35 317 2.2E-11 T 14-10-2018 Amir_4342 1582149571ff31489b8be13bc90cbe07 416 Pfam PF00999 Sodium/hydrogen exchanger family 15 392 5.1E-54 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Amir_4342 1582149571ff31489b8be13bc90cbe07 416 Gene3D G3DSA:1.20.1530.20 7 403 1.6E-94 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Amir_2700 5d1900e193a19631fe44ee49f7d6fe36 429 Gene3D G3DSA:3.30.565.10 299 420 8.2E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2700 5d1900e193a19631fe44ee49f7d6fe36 429 SUPERFAMILY SSF55874 313 419 9.04E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2700 5d1900e193a19631fe44ee49f7d6fe36 429 Pfam PF07730 Histidine kinase 231 298 1.2E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_2700 5d1900e193a19631fe44ee49f7d6fe36 429 SMART SM00387 331 421 0.0028 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2700 5d1900e193a19631fe44ee49f7d6fe36 429 Pfam PF13796 Putative sensor 22 202 5.8E-18 T 14-10-2018 IPR025828 Putative sensor domain Amir_4950 ef87596298bf5040539e783c75df425a 244 Pfam PF01066 CDP-alcohol phosphatidyltransferase 69 133 4.3E-9 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amir_4950 ef87596298bf5040539e783c75df425a 244 Gene3D G3DSA:1.20.120.1760 50 243 2.0E-25 T 14-10-2018 Amir_5434 37dda219c7e4e102cd91b59e6593922a 213 Pfam PF00293 NUDIX domain 50 161 5.6E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_5434 37dda219c7e4e102cd91b59e6593922a 213 SUPERFAMILY SSF55811 15 183 4.06E-41 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_5434 37dda219c7e4e102cd91b59e6593922a 213 Gene3D G3DSA:3.90.79.10 7 212 2.3E-58 T 14-10-2018 Amir_0670 0c099eb37f5f872c0d4e1ceb51fac521 127 SUPERFAMILY SSF48452 9 106 2.9E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0670 0c099eb37f5f872c0d4e1ceb51fac521 127 Pfam PF13432 Tetratricopeptide repeat 43 104 4.4E-9 T 14-10-2018 Amir_0670 0c099eb37f5f872c0d4e1ceb51fac521 127 SMART SM00028 73 106 3.4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0670 0c099eb37f5f872c0d4e1ceb51fac521 127 SMART SM00028 39 72 0.068 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0670 0c099eb37f5f872c0d4e1ceb51fac521 127 Gene3D G3DSA:1.25.40.10 3 125 7.8E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_1077 9d452176203fe578022de3bc806a8c5a 464 Gene3D G3DSA:2.60.120.200 34 312 4.6E-85 T 14-10-2018 Amir_1077 9d452176203fe578022de3bc806a8c5a 464 SMART SM00606 328 464 3.7E-34 T 14-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 Amir_1077 9d452176203fe578022de3bc806a8c5a 464 SUPERFAMILY SSF49785 330 462 1.63E-25 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_1077 9d452176203fe578022de3bc806a8c5a 464 SUPERFAMILY SSF49899 33 309 2.44E-46 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_1077 9d452176203fe578022de3bc806a8c5a 464 Gene3D G3DSA:2.60.120.260 313 463 2.9E-35 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_1077 9d452176203fe578022de3bc806a8c5a 464 Pfam PF03422 Carbohydrate binding module (family 6) 336 463 2.8E-30 T 14-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 Amir_1077 9d452176203fe578022de3bc806a8c5a 464 Pfam PF00722 Glycosyl hydrolases family 16 83 291 3.4E-11 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 Amir_3716 d9b3836ae488b04d1f02727fd6d682f6 459 SUPERFAMILY SSF102114 153 417 7.45E-13 T 14-10-2018 Amir_3716 d9b3836ae488b04d1f02727fd6d682f6 459 Gene3D G3DSA:3.20.20.70 107 402 1.7E-72 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_6035 c6c5571e24bb8da3b808c9710ddc871d 99 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 23.119 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Amir_6035 c6c5571e24bb8da3b808c9710ddc871d 99 SUPERFAMILY SSF141000 3 94 6.67E-27 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 Amir_6035 c6c5571e24bb8da3b808c9710ddc871d 99 Gene3D G3DSA:1.10.20.60 2 94 3.7E-22 T 14-10-2018 Amir_6035 c6c5571e24bb8da3b808c9710ddc871d 99 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 2.7E-22 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Amir_6035 c6c5571e24bb8da3b808c9710ddc871d 99 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 21 91 2.4E-15 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Amir_1976 aae9fb8d20734a897194f0e29f8de469 679 Pfam PF08533 Beta-galactosidase C-terminal domain 618 676 4.8E-5 T 14-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_1976 aae9fb8d20734a897194f0e29f8de469 679 Gene3D G3DSA:2.60.40.1180 616 677 2.6E-9 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_1976 aae9fb8d20734a897194f0e29f8de469 679 Pfam PF02449 Beta-galactosidase 10 385 1.5E-141 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_1976 aae9fb8d20734a897194f0e29f8de469 679 Pfam PF08532 Beta-galactosidase trimerisation domain 398 608 7.4E-60 T 14-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_1976 aae9fb8d20734a897194f0e29f8de469 679 Gene3D G3DSA:3.20.20.80 2 394 1.7E-131 T 14-10-2018 Amir_1976 aae9fb8d20734a897194f0e29f8de469 679 Gene3D G3DSA:3.40.50.880 396 610 2.3E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_1976 aae9fb8d20734a897194f0e29f8de469 679 SUPERFAMILY SSF52317 395 608 1.83E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_1976 aae9fb8d20734a897194f0e29f8de469 679 PIRSF PIRSF001084 1 678 7.4E-239 T 14-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Amir_1976 aae9fb8d20734a897194f0e29f8de469 679 SUPERFAMILY SSF51445 5 367 3.94E-104 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1406 1ae23e6e669cc525df0afc5a18fd98f4 187 SUPERFAMILY SSF55729 21 183 3.78E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_1406 1ae23e6e669cc525df0afc5a18fd98f4 187 Gene3D G3DSA:3.40.630.30 12 174 5.7E-17 T 14-10-2018 Amir_1406 1ae23e6e669cc525df0afc5a18fd98f4 187 Pfam PF00583 Acetyltransferase (GNAT) family 29 161 1.8E-7 T 14-10-2018 IPR000182 GNAT domain Amir_4975 5effefec66e6b252302486e63b01d51c 682 SUPERFAMILY SSF82866 441 661 8.11E-31 T 14-10-2018 Amir_4975 5effefec66e6b252302486e63b01d51c 682 Gene3D G3DSA:1.20.1640.10 140 325 7.3E-15 T 14-10-2018 Amir_4975 5effefec66e6b252302486e63b01d51c 682 Gene3D G3DSA:1.20.1640.10 467 657 8.2E-8 T 14-10-2018 Amir_4975 5effefec66e6b252302486e63b01d51c 682 Pfam PF03176 MMPL family 102 350 1.3E-57 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Amir_4975 5effefec66e6b252302486e63b01d51c 682 Pfam PF03176 MMPL family 441 663 1.2E-52 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Amir_4975 5effefec66e6b252302486e63b01d51c 682 SUPERFAMILY SSF82866 126 322 2.35E-34 T 14-10-2018 Amir_2822 3af75ffb156262aed691fa6a253a61ec 223 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 75 1.2E-11 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_2822 3af75ffb156262aed691fa6a253a61ec 223 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 86 162 2.8E-6 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_2822 3af75ffb156262aed691fa6a253a61ec 223 SUPERFAMILY SSF53254 2 180 5.11E-24 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_2822 3af75ffb156262aed691fa6a253a61ec 223 Gene3D G3DSA:3.40.50.1240 1 182 2.9E-24 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_6859 2ab668d0f0d90978b6c919dd504f47f7 525 Gene3D G3DSA:3.40.50.2020 297 461 1.0E-144 T 14-10-2018 Amir_6859 2ab668d0f0d90978b6c919dd504f47f7 525 Gene3D G3DSA:3.60.20.10 35 480 1.0E-144 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_6859 2ab668d0f0d90978b6c919dd504f47f7 525 SUPERFAMILY SSF56235 35 290 2.23E-62 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_6859 2ab668d0f0d90978b6c919dd504f47f7 525 PIRSF PIRSF000485 31 490 1.7E-158 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Amir_6859 2ab668d0f0d90978b6c919dd504f47f7 525 SUPERFAMILY SSF53271 273 487 5.51E-67 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Amir_6859 2ab668d0f0d90978b6c919dd504f47f7 525 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 35 479 2.1E-157 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Amir_6859 2ab668d0f0d90978b6c919dd504f47f7 525 Pfam PF13522 Glutamine amidotransferase domain 92 232 9.2E-16 T 14-10-2018 Amir_6859 2ab668d0f0d90978b6c919dd504f47f7 525 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 34 478 45.435 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Amir_6875 41a6e98c338f46d46f799cf1a3768135 262 SMART SM00641 62 171 4.0E-46 T 14-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup Amir_6875 41a6e98c338f46d46f799cf1a3768135 262 Gene3D G3DSA:3.20.20.80 59 262 2.0E-79 T 14-10-2018 Amir_6875 41a6e98c338f46d46f799cf1a3768135 262 ProSitePatterns PS00953 Glycosyl hydrolases family 25 active sites signature. 66 99 - T 14-10-2018 IPR008270 Glycoside hydrolase, family 25, active site GO:0003796|GO:0009253|GO:0016998 Amir_6875 41a6e98c338f46d46f799cf1a3768135 262 Pfam PF01183 Glycosyl hydrolases family 25 65 244 7.4E-49 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 Amir_6875 41a6e98c338f46d46f799cf1a3768135 262 SUPERFAMILY SSF51445 59 260 3.16E-63 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_4868 08eaf869b1316aafaf2a64719473cd85 124 Pfam PF01381 Helix-turn-helix 26 66 1.3E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_4868 08eaf869b1316aafaf2a64719473cd85 124 SMART SM00530 11 66 1.9E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_4868 08eaf869b1316aafaf2a64719473cd85 124 Gene3D G3DSA:1.10.260.40 3 71 1.4E-8 T 14-10-2018 Amir_4868 08eaf869b1316aafaf2a64719473cd85 124 SUPERFAMILY SSF47413 6 71 2.45E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_4394 bdd120f3e87970f5f9386e6e0bd06a4f 186 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 8 124 1.3E-11 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 Amir_4394 bdd120f3e87970f5f9386e6e0bd06a4f 186 Gene3D G3DSA:1.20.120.450 2 128 8.8E-13 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_4394 bdd120f3e87970f5f9386e6e0bd06a4f 186 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 7 180 2.7E-26 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type Amir_4394 bdd120f3e87970f5f9386e6e0bd06a4f 186 TIGRFAM TIGR03086 TIGR03086: TIGR03086 family protein 9 180 2.3E-47 T 14-10-2018 IPR017520 Conserved hypothetical protein CHP03086 Amir_4394 bdd120f3e87970f5f9386e6e0bd06a4f 186 SUPERFAMILY SSF109854 7 129 6.41E-20 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_1270 d32124a04e82969f6e7330b72e091335 351 SMART SM00093 11 351 3.9E-46 T 14-10-2018 IPR023796 Serpin domain Amir_1270 d32124a04e82969f6e7330b72e091335 351 Gene3D G3DSA:2.30.39.10 155 351 1.0E-67 T 14-10-2018 Amir_1270 d32124a04e82969f6e7330b72e091335 351 Pfam PF00079 Serpin (serine protease inhibitor) 8 351 3.4E-61 T 14-10-2018 IPR023796 Serpin domain Amir_1270 d32124a04e82969f6e7330b72e091335 351 Gene3D G3DSA:3.30.497.10 26 312 1.0E-67 T 14-10-2018 Amir_1270 d32124a04e82969f6e7330b72e091335 351 SUPERFAMILY SSF56574 6 351 7.46E-69 T 14-10-2018 IPR036186 Serpin superfamily Amir_4020 4d4efdca343cd34a8b81b1a6b23258c9 283 TIGRFAM TIGR03564 F420_MSMEG_4879: F420-dependent oxidoreductase, MSMEG_4879 family 21 261 5.9E-75 T 14-10-2018 IPR019910 Luciferase-like, F420-dependent oxidoreductase, MSMEG4879, predicted Amir_4020 4d4efdca343cd34a8b81b1a6b23258c9 283 SUPERFAMILY SSF51679 18 276 1.13E-46 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_4020 4d4efdca343cd34a8b81b1a6b23258c9 283 Gene3D G3DSA:3.20.20.30 12 282 6.8E-51 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_4020 4d4efdca343cd34a8b81b1a6b23258c9 283 Pfam PF00296 Luciferase-like monooxygenase 23 258 5.3E-38 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_1958 760c0fea3f5633405fbf58e4a6397c75 114 Gene3D G3DSA:3.40.50.720 2 71 3.6E-12 T 14-10-2018 Amir_1958 760c0fea3f5633405fbf58e4a6397c75 114 SUPERFAMILY SSF51735 6 52 7.54E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1958 760c0fea3f5633405fbf58e4a6397c75 114 Pfam PF00106 short chain dehydrogenase 8 53 2.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5177 4a6adef56100c4857724e6491508ddb1 543 Pfam PF05960 Bacterial protein of unknown function (DUF885) 31 539 7.9E-102 T 14-10-2018 IPR010281 Protein of unknown function DUF885 Amir_3953 17c6d65a4a5f08fd102ab607b18efe10 104 SUPERFAMILY SSF52091 11 83 8.24E-10 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3953 17c6d65a4a5f08fd102ab607b18efe10 104 Pfam PF13466 STAS domain 19 76 6.2E-9 T 14-10-2018 IPR002645 STAS domain Amir_3953 17c6d65a4a5f08fd102ab607b18efe10 104 Gene3D G3DSA:3.30.750.24 3 101 1.6E-14 T 14-10-2018 IPR036513 STAS domain superfamily Amir_5421 76d904278b2dced85fecb72cf6e17782 294 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_5421 76d904278b2dced85fecb72cf6e17782 294 SUPERFAMILY SSF52540 4 235 1.03E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5421 76d904278b2dced85fecb72cf6e17782 294 Pfam PF00005 ABC transporter 25 165 9.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5421 76d904278b2dced85fecb72cf6e17782 294 Gene3D G3DSA:3.40.50.300 1 281 2.0E-66 T 14-10-2018 Amir_5421 76d904278b2dced85fecb72cf6e17782 294 SMART SM00382 33 214 2.3E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6380 686d4eaa0705076a6c47304039017104 223 SUPERFAMILY SSF52172 4 178 1.21E-41 T 14-10-2018 IPR011006 CheY-like superfamily Amir_6380 686d4eaa0705076a6c47304039017104 223 SMART SM00448 2 113 4.8E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6380 686d4eaa0705076a6c47304039017104 223 Pfam PF00072 Response regulator receiver domain 4 114 3.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6380 686d4eaa0705076a6c47304039017104 223 Gene3D G3DSA:3.40.50.2300 1 120 2.5E-37 T 14-10-2018 Amir_6380 686d4eaa0705076a6c47304039017104 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 219 2.1E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_6380 686d4eaa0705076a6c47304039017104 223 Gene3D G3DSA:1.10.10.10 121 223 7.3E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6380 686d4eaa0705076a6c47304039017104 223 SMART SM00862 143 219 2.6E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_3509 2e0e9b4f5b0057888fb9b73af9ab92a3 1011 Pfam PF16918 Protein kinase G tetratricopeptide repeat 713 1009 1.1E-67 T 14-10-2018 IPR031636 Protein kinase G, tetratricopeptide repeat containing domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Amir_3509 2e0e9b4f5b0057888fb9b73af9ab92a3 1011 Gene3D G3DSA:1.25.40.10 697 860 2.8E-86 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3509 2e0e9b4f5b0057888fb9b73af9ab92a3 1011 SUPERFAMILY SSF56112 415 685 1.16E-43 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_3509 2e0e9b4f5b0057888fb9b73af9ab92a3 1011 Gene3D G3DSA:1.25.40.10 706 1006 2.8E-86 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_3509 2e0e9b4f5b0057888fb9b73af9ab92a3 1011 Gene3D G3DSA:1.10.510.10 518 679 4.4E-105 T 14-10-2018 Amir_3509 2e0e9b4f5b0057888fb9b73af9ab92a3 1011 Gene3D G3DSA:3.30.200.20 382 517 4.4E-105 T 14-10-2018 Amir_3509 2e0e9b4f5b0057888fb9b73af9ab92a3 1011 Pfam PF00069 Protein kinase domain 431 628 4.2E-27 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_3509 2e0e9b4f5b0057888fb9b73af9ab92a3 1011 Pfam PF16919 Protein kinase G rubredoxin domain 310 429 4.2E-36 T 14-10-2018 IPR031634 Protein kinase G, rubredoxin domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Amir_3509 2e0e9b4f5b0057888fb9b73af9ab92a3 1011 SMART SM00220 430 678 2.1E-22 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_6028 0f1969fbdda3f0325910afdb8412a2e6 317 SUPERFAMILY SSF53474 26 289 8.99E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6028 0f1969fbdda3f0325910afdb8412a2e6 317 Gene3D G3DSA:3.40.50.1820 19 292 2.2E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6028 0f1969fbdda3f0325910afdb8412a2e6 317 Pfam PF00561 alpha/beta hydrolase fold 68 272 2.0E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_5286 87114e4cd08beb1f131cdb8d8d99ebc3 218 SUPERFAMILY SSF56214 100 212 1.12E-12 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Amir_5286 87114e4cd08beb1f131cdb8d8d99ebc3 218 PRINTS PR01399 Enterobactin synthetase component D signature 144 160 2.3E-25 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 Amir_5286 87114e4cd08beb1f131cdb8d8d99ebc3 218 PRINTS PR01399 Enterobactin synthetase component D signature 37 57 2.3E-25 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 Amir_5286 87114e4cd08beb1f131cdb8d8d99ebc3 218 PRINTS PR01399 Enterobactin synthetase component D signature 67 85 2.3E-25 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 Amir_5286 87114e4cd08beb1f131cdb8d8d99ebc3 218 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 102 187 8.4E-11 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Amir_5595 854a61f4956e268c6bf778f7ef37f542 456 Pfam PF10935 Protein of unknown function (DUF2637) 124 303 2.5E-45 T 14-10-2018 IPR021235 Protein of unknown function DUF2637 Amir_0311 506aedb0245707a9790f8a90323cfea0 182 Pfam PF00156 Phosphoribosyl transferase domain 10 162 3.1E-24 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Amir_0311 506aedb0245707a9790f8a90323cfea0 182 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 9 175 2.5E-67 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 Amir_0311 506aedb0245707a9790f8a90323cfea0 182 Gene3D G3DSA:3.40.50.2020 1 181 1.5E-66 T 14-10-2018 Amir_0311 506aedb0245707a9790f8a90323cfea0 182 SUPERFAMILY SSF53271 3 180 5.11E-54 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Amir_3959 c7c325e56fb0a78448c1e2e582289630 423 TIGRFAM TIGR01840 esterase_phb: esterase, PHB depolymerase family 38 247 2.4E-43 T 14-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 Amir_3959 c7c325e56fb0a78448c1e2e582289630 423 Gene3D G3DSA:3.40.50.1820 11 309 1.4E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3959 c7c325e56fb0a78448c1e2e582289630 423 SMART SM00637 321 420 1.9E-45 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_3959 c7c325e56fb0a78448c1e2e582289630 423 SUPERFAMILY SSF53474 121 333 1.35E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3959 c7c325e56fb0a78448c1e2e582289630 423 SUPERFAMILY SSF49384 316 421 3.14E-32 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_3959 c7c325e56fb0a78448c1e2e582289630 423 SUPERFAMILY SSF53474 15 96 2.65E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3959 c7c325e56fb0a78448c1e2e582289630 423 Pfam PF00553 Cellulose binding domain 321 420 5.6E-32 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_3959 c7c325e56fb0a78448c1e2e582289630 423 Gene3D G3DSA:2.60.40.290 315 423 7.4E-37 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_3959 c7c325e56fb0a78448c1e2e582289630 423 Pfam PF10503 Esterase PHB depolymerase 38 231 2.9E-21 T 14-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 Amir_4906 381194008ed95cb2fb6f302b7512387d 360 Pfam PF01032 FecCD transport family 41 354 6.8E-85 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_4906 381194008ed95cb2fb6f302b7512387d 360 Gene3D G3DSA:1.10.3470.10 29 358 8.6E-87 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_4906 381194008ed95cb2fb6f302b7512387d 360 SUPERFAMILY SSF81345 30 354 8.5E-72 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_1064 9c9ba9822970e605b4a16850c2edb98d 161 Pfam PF03703 Bacterial PH domain 71 146 8.3E-14 T 14-10-2018 IPR005182 Domain of unknown function DUF304 Amir_6549 3b9e5e324ad2aa774377b63bbd21472e 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 8.7E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6549 3b9e5e324ad2aa774377b63bbd21472e 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 8.7E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6549 3b9e5e324ad2aa774377b63bbd21472e 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 8.7E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6549 3b9e5e324ad2aa774377b63bbd21472e 128 Gene3D G3DSA:1.10.1660.10 2 126 7.8E-27 T 14-10-2018 Amir_6549 3b9e5e324ad2aa774377b63bbd21472e 128 SUPERFAMILY SSF46955 3 114 2.05E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_6549 3b9e5e324ad2aa774377b63bbd21472e 128 Pfam PF13411 MerR HTH family regulatory protein 3 62 8.6E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6549 3b9e5e324ad2aa774377b63bbd21472e 128 SMART SM00422 2 70 4.7E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6442 8ef6f425f09883f0720e4fd23bc311d0 392 Pfam PF00877 NlpC/P60 family 293 378 3.9E-19 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Amir_6442 8ef6f425f09883f0720e4fd23bc311d0 392 SUPERFAMILY SSF54001 277 390 2.13E-29 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amir_6442 8ef6f425f09883f0720e4fd23bc311d0 392 Gene3D G3DSA:3.90.1720.10 258 384 2.8E-36 T 14-10-2018 Amir_6442 8ef6f425f09883f0720e4fd23bc311d0 392 SUPERFAMILY SSF140453 23 105 5.1E-5 T 14-10-2018 IPR036689 ESAT-6-like superfamily Amir_0528 ed961df3068c74282b4fd68ec9322062 437 SUPERFAMILY SSF48256 13 437 3.66E-159 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Amir_0528 ed961df3068c74282b4fd68ec9322062 437 Gene3D G3DSA:1.10.580.10 65 420 1.8E-142 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Amir_0528 ed961df3068c74282b4fd68ec9322062 437 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 23 431 6.4E-182 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 Amir_0528 ed961df3068c74282b4fd68ec9322062 437 ProSitePatterns PS00480 Citrate synthase signature. 312 324 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Amir_0528 ed961df3068c74282b4fd68ec9322062 437 Gene3D G3DSA:2.20.28.60 8 58 1.4E-15 T 14-10-2018 Amir_0528 ed961df3068c74282b4fd68ec9322062 437 Gene3D G3DSA:1.10.230.10 276 385 1.8E-142 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Amir_0528 ed961df3068c74282b4fd68ec9322062 437 PIRSF PIRSF001369 45 437 8.9E-157 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type Amir_0528 ed961df3068c74282b4fd68ec9322062 437 PRINTS PR00143 Citrate synthase signature 227 242 3.8E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Amir_0528 ed961df3068c74282b4fd68ec9322062 437 PRINTS PR00143 Citrate synthase signature 305 325 3.8E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Amir_0528 ed961df3068c74282b4fd68ec9322062 437 PRINTS PR00143 Citrate synthase signature 173 186 3.8E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Amir_0528 ed961df3068c74282b4fd68ec9322062 437 PRINTS PR00143 Citrate synthase signature 249 277 3.8E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Amir_0528 ed961df3068c74282b4fd68ec9322062 437 PRINTS PR00143 Citrate synthase signature 388 402 3.8E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Amir_0528 ed961df3068c74282b4fd68ec9322062 437 PRINTS PR00143 Citrate synthase signature 368 384 3.8E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Amir_0528 ed961df3068c74282b4fd68ec9322062 437 Pfam PF00285 Citrate synthase, C-terminal domain 54 420 2.7E-136 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Amir_2072 e8af480105afb033a9bfcb3ac7b57554 194 Pfam PF04229 GrpB protein 29 185 1.2E-48 T 14-10-2018 IPR007344 GrpB/Dephospho-CoA kinase Amir_2072 e8af480105afb033a9bfcb3ac7b57554 194 Gene3D G3DSA:3.30.460.10 25 190 6.0E-44 T 14-10-2018 Amir_2072 e8af480105afb033a9bfcb3ac7b57554 194 SUPERFAMILY SSF81301 31 189 8.83E-44 T 14-10-2018 Amir_0787 eb16d681ceada7c780a9d57a8d2ed28c 268 Pfam PF07848 PaaX-like protein 2 65 3.3E-14 T 14-10-2018 IPR012906 PaaX-like, N-terminal Amir_0787 eb16d681ceada7c780a9d57a8d2ed28c 268 PIRSF PIRSF020623 1 267 1.3E-63 T 14-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 Amir_0787 eb16d681ceada7c780a9d57a8d2ed28c 268 Gene3D G3DSA:1.10.10.10 1 83 7.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0787 eb16d681ceada7c780a9d57a8d2ed28c 268 Pfam PF08223 PaaX-like protein C-terminal domain 161 253 8.7E-24 T 14-10-2018 IPR013225 PaaX-like, C-terminal Amir_5989 00af4ea2318c8ea349680ace7624bbfb 155 Pfam PF05995 Cysteine dioxygenase type I 26 138 9.2E-19 T 14-10-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 Amir_5989 00af4ea2318c8ea349680ace7624bbfb 155 Gene3D G3DSA:2.60.120.10 13 143 8.0E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_5989 00af4ea2318c8ea349680ace7624bbfb 155 SUPERFAMILY SSF51182 15 147 3.91E-27 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_0558 c08be2bb720ce3135b3afdb6f2ab9ed3 439 SUPERFAMILY SSF53067 3 157 2.81E-16 T 14-10-2018 Amir_0558 c08be2bb720ce3135b3afdb6f2ab9ed3 439 Gene3D G3DSA:3.30.420.40 159 328 3.7E-52 T 14-10-2018 Amir_0558 c08be2bb720ce3135b3afdb6f2ab9ed3 439 Gene3D G3DSA:3.30.420.40 5 338 3.7E-52 T 14-10-2018 Amir_0558 c08be2bb720ce3135b3afdb6f2ab9ed3 439 Gene3D G3DSA:3.90.640.10 201 275 3.7E-52 T 14-10-2018 Amir_0558 c08be2bb720ce3135b3afdb6f2ab9ed3 439 SUPERFAMILY SSF53067 164 342 5.12E-19 T 14-10-2018 Amir_0558 c08be2bb720ce3135b3afdb6f2ab9ed3 439 Pfam PF00012 Hsp70 protein 84 340 2.4E-15 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amir_2957 6df092c35cabfc622ea5844f11b79fef 144 SUPERFAMILY SSF52402 4 142 5.94E-24 T 14-10-2018 Amir_2957 6df092c35cabfc622ea5844f11b79fef 144 Gene3D G3DSA:3.40.50.620 1 144 2.6E-33 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_2957 6df092c35cabfc622ea5844f11b79fef 144 Pfam PF00582 Universal stress protein family 4 142 4.9E-22 T 14-10-2018 IPR006016 UspA Amir_2957 6df092c35cabfc622ea5844f11b79fef 144 PRINTS PR01438 Universal stress protein signature 120 142 5.6E-7 T 14-10-2018 IPR006015 Universal stress protein A Amir_2957 6df092c35cabfc622ea5844f11b79fef 144 PRINTS PR01438 Universal stress protein signature 3 21 5.6E-7 T 14-10-2018 IPR006015 Universal stress protein A Amir_0076 ec3e6af9b86732edd6588335a0e36317 349 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 44 330 2.0E-42 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Amir_0076 ec3e6af9b86732edd6588335a0e36317 349 SUPERFAMILY SSF51695 40 336 3.66E-61 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amir_0076 ec3e6af9b86732edd6588335a0e36317 349 Gene3D G3DSA:3.20.20.190 29 343 1.9E-95 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amir_5240 bdfef54327808f274e5fe8d88a45b119 272 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 90 103 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amir_5240 bdfef54327808f274e5fe8d88a45b119 272 Gene3D G3DSA:3.20.20.70 2 271 8.5E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5240 bdfef54327808f274e5fe8d88a45b119 272 SUPERFAMILY SSF51366 3 265 5.18E-58 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Amir_5240 bdfef54327808f274e5fe8d88a45b119 272 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 2 272 32.699 T 14-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_5240 bdfef54327808f274e5fe8d88a45b119 272 SMART SM00934 16 262 1.6E-31 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amir_5240 bdfef54327808f274e5fe8d88a45b119 272 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 16 260 6.6E-35 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amir_5240 bdfef54327808f274e5fe8d88a45b119 272 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 3 262 3.1E-83 T 14-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amir_0120 7f672a02d20c018ed67c72913070e6ee 310 SUPERFAMILY SSF51679 31 307 1.57E-51 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_0120 7f672a02d20c018ed67c72913070e6ee 310 Gene3D G3DSA:3.20.20.30 15 304 5.6E-53 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_0120 7f672a02d20c018ed67c72913070e6ee 310 Pfam PF00296 Luciferase-like monooxygenase 35 236 4.6E-43 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_0458 31e7792106823fe726c357a442cea149 1092 SUPERFAMILY SSF55874 539 662 4.98E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0458 31e7792106823fe726c357a442cea149 1092 Gene3D G3DSA:3.30.565.10 489 659 2.5E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0458 31e7792106823fe726c357a442cea149 1092 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 556 663 2.0E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0458 31e7792106823fe726c357a442cea149 1092 Pfam PF00672 HAMP domain 368 437 2.8E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_0458 31e7792106823fe726c357a442cea149 1092 SMART SM00387 552 665 8.8E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0458 31e7792106823fe726c357a442cea149 1092 Pfam PF08376 Nitrate and nitrite sensing 90 330 1.0E-39 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein Amir_1314 519a6f44e0ced9ade71015202724470a 201 Gene3D G3DSA:1.10.357.10 13 200 2.6E-45 T 14-10-2018 Amir_1314 519a6f44e0ced9ade71015202724470a 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1314 519a6f44e0ced9ade71015202724470a 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1314 519a6f44e0ced9ade71015202724470a 201 SUPERFAMILY SSF46689 7 79 1.25E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_1314 519a6f44e0ced9ade71015202724470a 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 1.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6811 f2ff45869793c4d378406b69a6c5e4a2 393 Pfam PF01207 Dihydrouridine synthase (Dus) 35 340 1.1E-103 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Amir_6811 f2ff45869793c4d378406b69a6c5e4a2 393 Gene3D G3DSA:3.20.20.70 29 274 2.0E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_6811 f2ff45869793c4d378406b69a6c5e4a2 393 SUPERFAMILY SSF51395 34 342 5.49E-80 T 14-10-2018 Amir_6811 f2ff45869793c4d378406b69a6c5e4a2 393 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 25 343 2.8E-118 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 Amir_6811 f2ff45869793c4d378406b69a6c5e4a2 393 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 119 137 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Amir_6811 f2ff45869793c4d378406b69a6c5e4a2 393 Gene3D G3DSA:1.10.1200.80 282 351 1.6E-10 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 Amir_6811 f2ff45869793c4d378406b69a6c5e4a2 393 PIRSF PIRSF006621 22 357 2.4E-109 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Amir_3995 4f0c02d416103f6d77c076e743684294 181 Gene3D G3DSA:3.40.50.300 1 181 4.4E-25 T 14-10-2018 Amir_3995 4f0c02d416103f6d77c076e743684294 181 SUPERFAMILY SSF52540 1 121 1.99E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3995 4f0c02d416103f6d77c076e743684294 181 Pfam PF13671 AAA domain 4 126 2.5E-12 T 14-10-2018 Amir_2664 5cd2a0e4edebe46beabb2c197f107d65 273 Pfam PF02274 Amidinotransferase 62 265 1.5E-14 T 14-10-2018 Amir_2664 5cd2a0e4edebe46beabb2c197f107d65 273 Gene3D G3DSA:3.75.10.10 7 264 1.7E-51 T 14-10-2018 Amir_2664 5cd2a0e4edebe46beabb2c197f107d65 273 SUPERFAMILY SSF55909 10 266 4.32E-52 T 14-10-2018 Amir_6708 bea5d75fc848dc2a492b7d7d3076c937 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.1E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_6708 bea5d75fc848dc2a492b7d7d3076c937 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.1E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_6708 bea5d75fc848dc2a492b7d7d3076c937 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.1E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_6708 bea5d75fc848dc2a492b7d7d3076c937 153 SMART SM00344 1 108 4.2E-37 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Amir_6708 bea5d75fc848dc2a492b7d7d3076c937 153 SUPERFAMILY SSF46785 1 60 1.12E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6708 bea5d75fc848dc2a492b7d7d3076c937 153 Pfam PF01037 Lrp/AsnC ligand binding domain 67 138 9.8E-18 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Amir_6708 bea5d75fc848dc2a492b7d7d3076c937 153 Gene3D G3DSA:1.10.10.10 2 52 1.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6708 bea5d75fc848dc2a492b7d7d3076c937 153 SUPERFAMILY SSF54909 61 143 4.96E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_6708 bea5d75fc848dc2a492b7d7d3076c937 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Amir_6708 bea5d75fc848dc2a492b7d7d3076c937 153 Pfam PF13404 AsnC-type helix-turn-helix domain 2 42 2.0E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amir_6708 bea5d75fc848dc2a492b7d7d3076c937 153 Gene3D G3DSA:3.30.70.920 54 135 3.2E-22 T 14-10-2018 Amir_5543 e7a33976181dfe575bf186475f54be2d 438 Gene3D G3DSA:3.20.20.190 161 357 5.6E-9 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amir_5543 e7a33976181dfe575bf186475f54be2d 438 SUPERFAMILY SSF50370 47 138 3.5E-6 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_5543 e7a33976181dfe575bf186475f54be2d 438 SUPERFAMILY SSF51695 163 426 6.28E-33 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amir_5740 c8378b7cd561d72a4473405b83b47f81 81 SUPERFAMILY SSF52833 4 67 7.34E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_5740 c8378b7cd561d72a4473405b83b47f81 81 Gene3D G3DSA:3.40.30.10 2 80 6.9E-22 T 14-10-2018 Amir_5740 c8378b7cd561d72a4473405b83b47f81 81 Pfam PF00462 Glutaredoxin 4 62 7.4E-13 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Amir_5022 9a83cc91346009f78d6ee6e6381da46b 112 Pfam PF05331 Protein of unknown function (DUF742) 4 111 4.3E-32 T 14-10-2018 IPR007995 Protein of unknown function DUF742 Amir_0395 ec48fd6cdff2ce8ebeaf2cc8b11fdf92 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 9.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0395 ec48fd6cdff2ce8ebeaf2cc8b11fdf92 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 9.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0395 ec48fd6cdff2ce8ebeaf2cc8b11fdf92 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 248 7.7E-54 T 14-10-2018 Amir_0395 ec48fd6cdff2ce8ebeaf2cc8b11fdf92 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.3E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0395 ec48fd6cdff2ce8ebeaf2cc8b11fdf92 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 6.3E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0395 ec48fd6cdff2ce8ebeaf2cc8b11fdf92 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.3E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0395 ec48fd6cdff2ce8ebeaf2cc8b11fdf92 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 6.3E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0395 ec48fd6cdff2ce8ebeaf2cc8b11fdf92 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 6.3E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0395 ec48fd6cdff2ce8ebeaf2cc8b11fdf92 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 6.3E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0395 ec48fd6cdff2ce8ebeaf2cc8b11fdf92 256 SUPERFAMILY SSF51735 10 250 4.72E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0395 ec48fd6cdff2ce8ebeaf2cc8b11fdf92 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 182 0.003 T 14-10-2018 Amir_0395 ec48fd6cdff2ce8ebeaf2cc8b11fdf92 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_0395 ec48fd6cdff2ce8ebeaf2cc8b11fdf92 256 Gene3D G3DSA:3.40.50.720 9 251 2.2E-68 T 14-10-2018 Amir_6703 093fda87dab814436b52f1c0829e4efc 538 Gene3D G3DSA:2.60.40.1730 49 231 2.6E-22 T 14-10-2018 Amir_6703 093fda87dab814436b52f1c0829e4efc 538 Pfam PF01433 Peptidase family M1 domain 315 459 7.4E-25 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amir_6703 093fda87dab814436b52f1c0829e4efc 538 SUPERFAMILY SSF55486 259 466 1.47E-49 T 14-10-2018 Amir_6703 093fda87dab814436b52f1c0829e4efc 538 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 338 350 1.6E-10 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amir_6703 093fda87dab814436b52f1c0829e4efc 538 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 166 181 1.6E-10 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amir_6703 093fda87dab814436b52f1c0829e4efc 538 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 334 1.6E-10 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amir_6703 093fda87dab814436b52f1c0829e4efc 538 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 214 229 1.6E-10 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amir_6703 093fda87dab814436b52f1c0829e4efc 538 Gene3D G3DSA:1.10.390.60 243 463 5.9E-36 T 14-10-2018 Amir_6703 093fda87dab814436b52f1c0829e4efc 538 SUPERFAMILY SSF63737 37 230 9.55E-31 T 14-10-2018 Amir_3311 42d14081381b2dfb122e47594635709d 308 Pfam PF00106 short chain dehydrogenase 14 209 1.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3311 42d14081381b2dfb122e47594635709d 308 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 216 0.0021 T 14-10-2018 Amir_3311 42d14081381b2dfb122e47594635709d 308 Gene3D G3DSA:3.40.50.720 12 305 1.9E-67 T 14-10-2018 Amir_3311 42d14081381b2dfb122e47594635709d 308 SUPERFAMILY SSF51735 14 258 1.37E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3311 42d14081381b2dfb122e47594635709d 308 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 8.6E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3311 42d14081381b2dfb122e47594635709d 308 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 8.6E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3311 42d14081381b2dfb122e47594635709d 308 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 8.6E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3311 42d14081381b2dfb122e47594635709d 308 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 8.6E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3311 42d14081381b2dfb122e47594635709d 308 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 8.6E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5539 014844b90257dad488a4d1777672b5a4 392 Pfam PF13458 Periplasmic binding protein 39 377 4.7E-60 T 14-10-2018 IPR028081 Leucine-binding protein domain Amir_5539 014844b90257dad488a4d1777672b5a4 392 Gene3D G3DSA:3.40.50.2300 157 285 3.6E-87 T 14-10-2018 Amir_5539 014844b90257dad488a4d1777672b5a4 392 Gene3D G3DSA:3.40.50.2300 41 359 3.6E-87 T 14-10-2018 Amir_5539 014844b90257dad488a4d1777672b5a4 392 SUPERFAMILY SSF53822 39 381 2.49E-79 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_5383 deee205d1f3aced1c9cb66b1a16bae45 93 Pfam PF05488 PAAR motif 7 83 6.1E-22 T 14-10-2018 IPR008727 PAAR motif Amir_5383 deee205d1f3aced1c9cb66b1a16bae45 93 Gene3D G3DSA:2.60.200.60 2 92 7.9E-17 T 14-10-2018 Amir_4016 68c7ce06d2a670ef7f96b55a8fae19db 450 Gene3D G3DSA:3.90.1150.10 316 449 1.7E-48 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_4016 68c7ce06d2a670ef7f96b55a8fae19db 450 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 28 447 1.4E-178 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 Amir_4016 68c7ce06d2a670ef7f96b55a8fae19db 450 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 223 237 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amir_4016 68c7ce06d2a670ef7f96b55a8fae19db 450 SUPERFAMILY SSF53383 26 447 2.69E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_4016 68c7ce06d2a670ef7f96b55a8fae19db 450 Gene3D G3DSA:3.40.640.10 27 312 2.8E-98 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_4016 68c7ce06d2a670ef7f96b55a8fae19db 450 PIRSF PIRSF001434 17 449 9.1E-122 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amir_4016 68c7ce06d2a670ef7f96b55a8fae19db 450 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 29 447 6.8E-129 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 Gene3D G3DSA:1.10.10.10 1 94 5.6E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 Gene3D G3DSA:3.40.50.300 273 441 1.1E-27 T 14-10-2018 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 SUPERFAMILY SSF48452 97 252 6.16E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 SUPERFAMILY SSF52540 277 548 1.31E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 PRINTS PR00364 Disease resistance protein signature 484 498 2.5E-8 T 14-10-2018 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 PRINTS PR00364 Disease resistance protein signature 317 332 2.5E-8 T 14-10-2018 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 PRINTS PR00364 Disease resistance protein signature 396 410 2.5E-8 T 14-10-2018 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 Gene3D G3DSA:1.25.40.10 850 945 7.6E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 SMART SM00862 15 92 6.2E-4 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 SUPERFAMILY SSF48452 739 927 2.28E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 Pfam PF03704 Bacterial transcriptional activator domain 99 240 4.5E-37 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 SMART SM00028 778 811 230.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 SMART SM00028 818 851 1.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 SMART SM00028 898 931 84.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 SMART SM00028 858 891 0.0021 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 SMART SM00028 738 771 0.34 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 Pfam PF13424 Tetratricopeptide repeat 859 927 8.1E-8 T 14-10-2018 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 Pfam PF13424 Tetratricopeptide repeat 739 809 1.1E-8 T 14-10-2018 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 Pfam PF00931 NB-ARC domain 315 494 5.3E-12 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 Gene3D G3DSA:1.25.40.10 97 268 6.6E-46 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 Gene3D G3DSA:1.25.40.10 621 849 9.9E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 SMART SM01043 99 240 1.7E-44 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Amir_0576 36ed830d6570db1d33d125c830fb3aa0 946 SUPERFAMILY SSF46894 3 92 2.04E-7 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_1261 de3f8d335657da8113b4b18cde72c382 141 SUPERFAMILY SSF46785 13 135 2.49E-37 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1261 de3f8d335657da8113b4b18cde72c382 141 Gene3D G3DSA:3.30.1490.190 89 141 7.7E-24 T 14-10-2018 Amir_1261 de3f8d335657da8113b4b18cde72c382 141 Gene3D G3DSA:1.10.10.10 8 88 1.7E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1261 de3f8d335657da8113b4b18cde72c382 141 Pfam PF01475 Ferric uptake regulator family 13 129 2.9E-36 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Amir_2552 793cc24c8657d66d7c249df8dc645fac 165 Gene3D G3DSA:3.30.530.20 15 164 2.0E-27 T 14-10-2018 IPR023393 START-like domain superfamily Amir_2552 793cc24c8657d66d7c249df8dc645fac 165 SUPERFAMILY SSF55961 2 162 1.92E-35 T 14-10-2018 Amir_2552 793cc24c8657d66d7c249df8dc645fac 165 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 26 139 5.9E-11 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like Amir_6525 8f7d9ac77ff87866200f79f47e9608f5 216 SUPERFAMILY SSF46894 138 215 5.78E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_6525 8f7d9ac77ff87866200f79f47e9608f5 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 4.5E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6525 8f7d9ac77ff87866200f79f47e9608f5 216 SMART SM00421 153 210 1.6E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6525 8f7d9ac77ff87866200f79f47e9608f5 216 Gene3D G3DSA:3.40.50.12740 3 216 8.1E-63 T 14-10-2018 Amir_6525 8f7d9ac77ff87866200f79f47e9608f5 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 7.2E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6525 8f7d9ac77ff87866200f79f47e9608f5 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 7.2E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6525 8f7d9ac77ff87866200f79f47e9608f5 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 7.2E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_6525 8f7d9ac77ff87866200f79f47e9608f5 216 SUPERFAMILY SSF52172 3 135 1.99E-29 T 14-10-2018 IPR011006 CheY-like superfamily Amir_6525 8f7d9ac77ff87866200f79f47e9608f5 216 SMART SM00448 3 117 8.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6525 8f7d9ac77ff87866200f79f47e9608f5 216 Pfam PF00072 Response regulator receiver domain 5 117 1.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6525 8f7d9ac77ff87866200f79f47e9608f5 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4045 fc8c619ed9e5d658c5428b669528216e 582 SMART SM00382 360 546 1.9E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4045 fc8c619ed9e5d658c5428b669528216e 582 Pfam PF00664 ABC transporter transmembrane region 27 292 1.3E-16 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_4045 fc8c619ed9e5d658c5428b669528216e 582 Gene3D G3DSA:1.20.1560.10 6 323 4.2E-40 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_4045 fc8c619ed9e5d658c5428b669528216e 582 SUPERFAMILY SSF90123 17 324 3.01E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_4045 fc8c619ed9e5d658c5428b669528216e 582 Gene3D G3DSA:3.40.50.300 330 576 1.0E-79 T 14-10-2018 Amir_4045 fc8c619ed9e5d658c5428b669528216e 582 SUPERFAMILY SSF52540 327 568 8.14E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4045 fc8c619ed9e5d658c5428b669528216e 582 Pfam PF00005 ABC transporter 351 500 1.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4045 fc8c619ed9e5d658c5428b669528216e 582 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_4791 fb6f479838387340871bfc1f51756e12 290 SUPERFAMILY SSF46785 6 89 2.95E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4791 fb6f479838387340871bfc1f51756e12 290 Gene3D G3DSA:3.40.190.10 162 263 5.5E-24 T 14-10-2018 Amir_4791 fb6f479838387340871bfc1f51756e12 290 SUPERFAMILY SSF53850 102 287 5.79E-25 T 14-10-2018 Amir_4791 fb6f479838387340871bfc1f51756e12 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.4E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4791 fb6f479838387340871bfc1f51756e12 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4791 fb6f479838387340871bfc1f51756e12 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4791 fb6f479838387340871bfc1f51756e12 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4791 fb6f479838387340871bfc1f51756e12 290 Pfam PF03466 LysR substrate binding domain 101 287 2.4E-26 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_4791 fb6f479838387340871bfc1f51756e12 290 Gene3D G3DSA:1.10.10.10 3 89 1.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4791 fb6f479838387340871bfc1f51756e12 290 Gene3D G3DSA:3.40.190.10 104 282 5.5E-24 T 14-10-2018 Amir_2194 245f6d844a6bfbf233834e7dc50567c8 393 Pfam PF04542 Sigma-70 region 2 38 98 1.9E-6 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_2194 245f6d844a6bfbf233834e7dc50567c8 393 SUPERFAMILY SSF88946 22 99 1.81E-10 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_2194 245f6d844a6bfbf233834e7dc50567c8 393 Gene3D G3DSA:1.10.1740.10 18 102 5.3E-9 T 14-10-2018 Amir_0600 ded1381a5a2d39957ce390796274b15f 970 Gene3D G3DSA:2.30.120.10 488 575 2.0E-47 T 14-10-2018 Amir_0600 ded1381a5a2d39957ce390796274b15f 970 Gene3D G3DSA:3.60.20.10 415 943 2.0E-47 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_0600 ded1381a5a2d39957ce390796274b15f 970 Gene3D G3DSA:1.10.439.10 137 292 2.1E-27 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 Amir_0600 ded1381a5a2d39957ce390796274b15f 970 Pfam PF01804 Penicillin amidase 139 931 5.6E-122 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 Amir_0600 ded1381a5a2d39957ce390796274b15f 970 Gene3D G3DSA:1.10.1400.10 731 910 2.0E-47 T 14-10-2018 Amir_0600 ded1381a5a2d39957ce390796274b15f 970 SUPERFAMILY SSF56235 138 860 7.46E-93 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_0420 d2fa9ae3ae8c4085e525f4c1006ac5b7 234 SUPERFAMILY SSF53474 3 228 5.31E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0420 d2fa9ae3ae8c4085e525f4c1006ac5b7 234 Gene3D G3DSA:3.40.50.1820 1 231 4.6E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0420 d2fa9ae3ae8c4085e525f4c1006ac5b7 234 Pfam PF12697 Alpha/beta hydrolase family 6 224 4.1E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_2718 41be4f33367184017caa263054846079 467 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 418 8.9E-87 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Amir_2718 41be4f33367184017caa263054846079 467 SUPERFAMILY SSF103473 10 454 2.22E-61 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2718 41be4f33367184017caa263054846079 467 Gene3D G3DSA:1.20.1250.20 259 455 3.9E-19 T 14-10-2018 Amir_2718 41be4f33367184017caa263054846079 467 Gene3D G3DSA:1.20.1720.10 16 223 4.3E-46 T 14-10-2018 Amir_2718 41be4f33367184017caa263054846079 467 Pfam PF07690 Major Facilitator Superfamily 19 409 1.1E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_6987 ed4946b375f5ea1ffb3ec29e58cb4183 278 SUPERFAMILY SSF161098 53 244 2.21E-37 T 14-10-2018 IPR035906 MetI-like superfamily Amir_6987 ed4946b375f5ea1ffb3ec29e58cb4183 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 254 8.1E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_6987 ed4946b375f5ea1ffb3ec29e58cb4183 278 Gene3D G3DSA:1.10.3720.10 41 258 2.9E-45 T 14-10-2018 IPR035906 MetI-like superfamily Amir_6987 ed4946b375f5ea1ffb3ec29e58cb4183 278 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 54 149 2.7E-19 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Amir_4725 8799e3ccb603d8195ae53d1a3bd26dec 85 Gene3D G3DSA:3.10.20.440 1 85 1.3E-21 T 14-10-2018 Amir_4725 8799e3ccb603d8195ae53d1a3bd26dec 85 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 81 7.6E-25 T 14-10-2018 Amir_4725 8799e3ccb603d8195ae53d1a3bd26dec 85 SUPERFAMILY SSF54292 4 82 3.1E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amir_3706 0e62493046e40e8a4adbf18a4558d2e7 226 Gene3D G3DSA:3.40.50.12740 2 217 2.4E-34 T 14-10-2018 Amir_3706 0e62493046e40e8a4adbf18a4558d2e7 226 PIRSF PIRSF006171 1 226 2.3E-64 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 Amir_3706 0e62493046e40e8a4adbf18a4558d2e7 226 SUPERFAMILY SSF52172 3 158 9.68E-37 T 14-10-2018 IPR011006 CheY-like superfamily Amir_3706 0e62493046e40e8a4adbf18a4558d2e7 226 Pfam PF00072 Response regulator receiver domain 5 115 1.9E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3706 0e62493046e40e8a4adbf18a4558d2e7 226 SMART SM00448 2 116 9.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6047 b688bbae70c4ebf5c3f7b590cc9b3a98 515 SUPERFAMILY SSF103473 82 506 7.98E-41 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_6047 b688bbae70c4ebf5c3f7b590cc9b3a98 515 Pfam PF07690 Major Facilitator Superfamily 89 418 7.1E-31 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_6047 b688bbae70c4ebf5c3f7b590cc9b3a98 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 327 352 3.8E-5 T 14-10-2018 Amir_6047 b688bbae70c4ebf5c3f7b590cc9b3a98 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 206 230 3.8E-5 T 14-10-2018 Amir_6047 b688bbae70c4ebf5c3f7b590cc9b3a98 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 176 196 3.8E-5 T 14-10-2018 Amir_1879 d24c5209a5538b4b510b80f433ee6151 368 SUPERFAMILY SSF55874 256 362 2.6E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1879 d24c5209a5538b4b510b80f433ee6151 368 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 273 362 1.6E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_1879 d24c5209a5538b4b510b80f433ee6151 368 Gene3D G3DSA:3.30.565.10 240 362 3.8E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1629 f271c6f239ed0701f3df107faf48e010 395 Pfam PF14594 Siphovirus ReqiPepy6 Gp37-like protein 28 367 8.5E-74 T 14-10-2018 IPR029432 Siphovirus Gp37-like protein Amir_2536 d99d4aefb84564392041d51438e81108 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.3E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2536 d99d4aefb84564392041d51438e81108 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 2.3E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2536 d99d4aefb84564392041d51438e81108 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 2.3E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2536 d99d4aefb84564392041d51438e81108 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 2.3E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2536 d99d4aefb84564392041d51438e81108 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 214 2.3E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2536 d99d4aefb84564392041d51438e81108 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 2.3E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2536 d99d4aefb84564392041d51438e81108 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_2536 d99d4aefb84564392041d51438e81108 262 SUPERFAMILY SSF51735 3 238 3.44E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2536 d99d4aefb84564392041d51438e81108 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 129 1.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2536 d99d4aefb84564392041d51438e81108 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 70 81 1.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2536 d99d4aefb84564392041d51438e81108 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 160 1.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2536 d99d4aefb84564392041d51438e81108 262 Pfam PF00106 short chain dehydrogenase 4 182 9.8E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2536 d99d4aefb84564392041d51438e81108 262 Gene3D G3DSA:3.40.50.720 1 222 6.1E-45 T 14-10-2018 Amir_1320 f78eeb349637f0d5c7c73f57757677cd 620 ProSitePatterns PS00211 ABC transporters family signature. 525 539 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_1320 f78eeb349637f0d5c7c73f57757677cd 620 Pfam PF00664 ABC transporter transmembrane region 17 273 5.2E-12 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_1320 f78eeb349637f0d5c7c73f57757677cd 620 SUPERFAMILY SSF52540 410 612 1.78E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1320 f78eeb349637f0d5c7c73f57757677cd 620 Gene3D G3DSA:3.40.50.300 399 618 1.0E-57 T 14-10-2018 Amir_1320 f78eeb349637f0d5c7c73f57757677cd 620 Gene3D G3DSA:1.20.1560.10 3 304 3.6E-31 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_1320 f78eeb349637f0d5c7c73f57757677cd 620 SMART SM00382 429 599 1.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1320 f78eeb349637f0d5c7c73f57757677cd 620 Pfam PF00005 ABC transporter 420 553 1.1E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1320 f78eeb349637f0d5c7c73f57757677cd 620 SUPERFAMILY SSF90123 9 303 6.93E-33 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_6306 0f474fa5da983eb1f0ed01ba8e049e46 222 Gene3D G3DSA:3.30.160.100 3 102 1.1E-23 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like Amir_6306 0f474fa5da983eb1f0ed01ba8e049e46 222 SUPERFAMILY SSF69754 1 107 6.67E-25 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like Amir_6306 0f474fa5da983eb1f0ed01ba8e049e46 222 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 99 4.9E-21 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Amir_6306 0f474fa5da983eb1f0ed01ba8e049e46 222 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 165 218 2.9E-22 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal Amir_6306 0f474fa5da983eb1f0ed01ba8e049e46 222 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 222 23.359 T 14-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid Amir_6306 0f474fa5da983eb1f0ed01ba8e049e46 222 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 4.9E-29 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Amir_6306 0f474fa5da983eb1f0ed01ba8e049e46 222 Gene3D G3DSA:3.30.505.50 176 221 5.9E-18 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily Amir_2698 57b540a047bb84b85e7b87f2c25a3d29 855 Pfam PF02687 FtsX-like permease family 300 396 5.5E-15 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amir_2698 57b540a047bb84b85e7b87f2c25a3d29 855 Pfam PF02687 FtsX-like permease family 757 847 6.1E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amir_5970 96b84d4865c7989c67ba89bea112df64 360 Gene3D G3DSA:3.60.15.10 84 351 2.4E-87 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_5970 96b84d4865c7989c67ba89bea112df64 360 Pfam PF12706 Beta-lactamase superfamily domain 113 308 2.5E-52 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_5970 96b84d4865c7989c67ba89bea112df64 360 SUPERFAMILY SSF56281 95 347 1.02E-38 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_6910 13b17b4bab112bf223d2e2abbbed02c1 212 Pfam PF07510 Protein of unknown function (DUF1524) 113 205 4.4E-8 T 14-10-2018 IPR011089 Domain of unknown function DUF1524 Amir_1710 9d1258efe34a740dadab97853a50813d 332 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 16 141 5.5E-22 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 Amir_1710 9d1258efe34a740dadab97853a50813d 332 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 16 218 4.4E-40 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type Amir_1710 9d1258efe34a740dadab97853a50813d 332 SUPERFAMILY SSF109854 7 146 2.98E-24 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_1710 9d1258efe34a740dadab97853a50813d 332 Gene3D G3DSA:1.20.120.450 9 145 7.2E-8 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_1710 9d1258efe34a740dadab97853a50813d 332 TIGRFAM TIGR03084 TIGR03084: TIGR03084 family protein 11 251 2.1E-91 T 14-10-2018 IPR017518 Conserved hypothetical protein CHP03084 Amir_4479 8ca9df9ceb91fff9d56a532b2534f5d9 383 Pfam PF00107 Zinc-binding dehydrogenase 171 290 4.5E-10 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_4479 8ca9df9ceb91fff9d56a532b2534f5d9 383 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amir_4479 8ca9df9ceb91fff9d56a532b2534f5d9 383 Gene3D G3DSA:3.90.180.10 13 333 9.8E-59 T 14-10-2018 Amir_4479 8ca9df9ceb91fff9d56a532b2534f5d9 383 SUPERFAMILY SSF50129 1 167 4.87E-33 T 14-10-2018 IPR011032 GroES-like superfamily Amir_4479 8ca9df9ceb91fff9d56a532b2534f5d9 383 SUPERFAMILY SSF51735 135 290 2.12E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4479 8ca9df9ceb91fff9d56a532b2534f5d9 383 Gene3D G3DSA:3.40.50.720 143 289 9.8E-59 T 14-10-2018 Amir_4479 8ca9df9ceb91fff9d56a532b2534f5d9 383 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 83 2.1E-13 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_4479 8ca9df9ceb91fff9d56a532b2534f5d9 383 SMART SM00829 10 317 9.0E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_6984 1c9c1dbdbf11c103a0e33d3ea48a9dbd 469 SUPERFAMILY SSF53187 13 463 1.23E-44 T 14-10-2018 Amir_6984 1c9c1dbdbf11c103a0e33d3ea48a9dbd 469 Gene3D G3DSA:3.40.630.10 17 455 7.6E-73 T 14-10-2018 Amir_6984 1c9c1dbdbf11c103a0e33d3ea48a9dbd 469 Gene3D G3DSA:3.30.70.360 206 378 7.6E-73 T 14-10-2018 Amir_6984 1c9c1dbdbf11c103a0e33d3ea48a9dbd 469 Pfam PF07687 Peptidase dimerisation domain 204 363 1.1E-11 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Amir_6984 1c9c1dbdbf11c103a0e33d3ea48a9dbd 469 Pfam PF01546 Peptidase family M20/M25/M40 92 463 1.3E-21 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Amir_4793 b532dac420021a94f58f1628544ff9fb 284 Gene3D G3DSA:3.20.20.140 1 281 1.4E-49 T 14-10-2018 Amir_4793 b532dac420021a94f58f1628544ff9fb 284 SUPERFAMILY SSF51556 3 280 1.11E-35 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_4793 b532dac420021a94f58f1628544ff9fb 284 Pfam PF04909 Amidohydrolase 4 279 3.4E-29 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_0609 c89d97144f9b6d85dde35d5ec088aedc 116 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 1 86 1.7E-15 T 14-10-2018 IPR009799 EthD domain Amir_0609 c89d97144f9b6d85dde35d5ec088aedc 116 Pfam PF07110 EthD domain 14 82 1.9E-7 T 14-10-2018 IPR009799 EthD domain Amir_0609 c89d97144f9b6d85dde35d5ec088aedc 116 Gene3D G3DSA:3.30.70.100 1 104 6.2E-29 T 14-10-2018 Amir_0609 c89d97144f9b6d85dde35d5ec088aedc 116 SUPERFAMILY SSF54909 1 85 2.15E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_6192 d11997670ad137dfb1c4fcd7b44beaa3 362 SUPERFAMILY SSF51679 4 352 9.25E-63 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_6192 d11997670ad137dfb1c4fcd7b44beaa3 362 Gene3D G3DSA:3.20.20.30 2 353 9.7E-90 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_6192 d11997670ad137dfb1c4fcd7b44beaa3 362 Pfam PF00296 Luciferase-like monooxygenase 31 259 2.7E-31 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_6192 d11997670ad137dfb1c4fcd7b44beaa3 362 PIRSF PIRSF000337 23 266 4.6E-48 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Amir_6192 d11997670ad137dfb1c4fcd7b44beaa3 362 PIRSF PIRSF000337 264 360 3.3E-10 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Amir_4069 8d14c4ba7ac7e809ea9c545ce2c1c857 232 SUPERFAMILY SSF46894 125 225 3.12E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4069 8d14c4ba7ac7e809ea9c545ce2c1c857 232 SMART SM00862 148 224 5.4E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4069 8d14c4ba7ac7e809ea9c545ce2c1c857 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 4.4E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4069 8d14c4ba7ac7e809ea9c545ce2c1c857 232 Pfam PF00072 Response regulator receiver domain 5 114 3.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4069 8d14c4ba7ac7e809ea9c545ce2c1c857 232 Gene3D G3DSA:1.10.10.10 124 225 2.8E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4069 8d14c4ba7ac7e809ea9c545ce2c1c857 232 Gene3D G3DSA:3.40.50.2300 2 123 6.7E-36 T 14-10-2018 Amir_4069 8d14c4ba7ac7e809ea9c545ce2c1c857 232 SMART SM00448 3 113 1.8E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4069 8d14c4ba7ac7e809ea9c545ce2c1c857 232 SUPERFAMILY SSF52172 4 125 5.83E-40 T 14-10-2018 IPR011006 CheY-like superfamily Amir_1559 fa65c9dc3fb6ad1be7b6b1447972d730 266 SUPERFAMILY SSF51658 24 217 6.31E-18 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Amir_1559 fa65c9dc3fb6ad1be7b6b1447972d730 266 Gene3D G3DSA:3.20.20.150 2 265 9.7E-87 T 14-10-2018 Amir_1559 fa65c9dc3fb6ad1be7b6b1447972d730 266 Pfam PF05114 Protein of unknown function (DUF692) 6 264 1.5E-85 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 Amir_2697 c58fe6ea9dd1e2123c3fdf68f3e4eb9b 279 Pfam PF00005 ABC transporter 38 184 8.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2697 c58fe6ea9dd1e2123c3fdf68f3e4eb9b 279 SUPERFAMILY SSF52540 19 237 2.72E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2697 c58fe6ea9dd1e2123c3fdf68f3e4eb9b 279 SMART SM00382 47 233 4.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2697 c58fe6ea9dd1e2123c3fdf68f3e4eb9b 279 Gene3D G3DSA:3.40.50.300 17 274 7.0E-66 T 14-10-2018 Amir_2697 c58fe6ea9dd1e2123c3fdf68f3e4eb9b 279 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_5868 539e17377d09b8c657a161a48c8bf9c3 243 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 201 212 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site Amir_5868 539e17377d09b8c657a161a48c8bf9c3 243 SUPERFAMILY SSF50494 9 242 1.18E-65 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_5868 539e17377d09b8c657a161a48c8bf9c3 243 Gene3D G3DSA:2.40.10.10 39 242 7.9E-69 T 14-10-2018 Amir_5868 539e17377d09b8c657a161a48c8bf9c3 243 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 110 124 5.4E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_5868 539e17377d09b8c657a161a48c8bf9c3 243 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 200 212 5.4E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_5868 539e17377d09b8c657a161a48c8bf9c3 243 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 54 69 5.4E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_5868 539e17377d09b8c657a161a48c8bf9c3 243 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 64 69 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 Amir_5868 539e17377d09b8c657a161a48c8bf9c3 243 Gene3D G3DSA:2.40.10.10 26 240 7.9E-69 T 14-10-2018 Amir_5868 539e17377d09b8c657a161a48c8bf9c3 243 SMART SM00020 25 243 3.5E-61 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_5868 539e17377d09b8c657a161a48c8bf9c3 243 Pfam PF00089 Trypsin 33 241 5.6E-51 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_4097 48d602708f153aa506c7b1e4cdbd3851 438 SUPERFAMILY SSF56112 114 307 3.51E-22 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_4097 48d602708f153aa506c7b1e4cdbd3851 438 Pfam PF03109 ABC1 family 118 225 6.9E-24 T 14-10-2018 IPR004147 UbiB domain Amir_0550 94cea0f1a2e76ad8d50e4384005f0f0b 329 Pfam PF03466 LysR substrate binding domain 91 292 2.3E-23 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_0550 94cea0f1a2e76ad8d50e4384005f0f0b 329 Gene3D G3DSA:3.40.190.10 99 279 9.1E-28 T 14-10-2018 Amir_0550 94cea0f1a2e76ad8d50e4384005f0f0b 329 SUPERFAMILY SSF53850 94 299 5.57E-20 T 14-10-2018 Amir_0550 94cea0f1a2e76ad8d50e4384005f0f0b 329 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 5.9E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_0550 94cea0f1a2e76ad8d50e4384005f0f0b 329 Gene3D G3DSA:1.10.10.10 3 92 6.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0550 94cea0f1a2e76ad8d50e4384005f0f0b 329 Gene3D G3DSA:3.40.190.10 169 270 9.1E-28 T 14-10-2018 Amir_0550 94cea0f1a2e76ad8d50e4384005f0f0b 329 SUPERFAMILY SSF46785 4 108 1.69E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0550 94cea0f1a2e76ad8d50e4384005f0f0b 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_0550 94cea0f1a2e76ad8d50e4384005f0f0b 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_0550 94cea0f1a2e76ad8d50e4384005f0f0b 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_1534 5f10a25bc9521e5a6f5279e7ff8c04b8 118 Pfam PF00934 PE family 18 104 1.4E-4 T 14-10-2018 IPR000084 PE-PGRS family, N-terminal Amir_6672 f3a35aa8a7634d1a33b1927308bdfae2 99 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 93 3.6E-24 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Amir_6672 f3a35aa8a7634d1a33b1927308bdfae2 99 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 1 99 20.191 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 Amir_6064 36663ed95f5fb2aee16a809e4d499d30 331 Pfam PF08241 Methyltransferase domain 86 183 9.1E-24 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_6064 36663ed95f5fb2aee16a809e4d499d30 331 SUPERFAMILY SSF53335 49 271 1.66E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_4373 b3d0bb9c058a3b4f4a6099962bf4a44f 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 56 1.6E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4373 b3d0bb9c058a3b4f4a6099962bf4a44f 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 64 87 1.6E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4373 b3d0bb9c058a3b4f4a6099962bf4a44f 229 SUPERFAMILY SSF48498 153 227 5.34E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4373 b3d0bb9c058a3b4f4a6099962bf4a44f 229 Gene3D G3DSA:1.10.357.10 85 224 2.9E-9 T 14-10-2018 Amir_4373 b3d0bb9c058a3b4f4a6099962bf4a44f 229 Pfam PF00440 Bacterial regulatory proteins, tetR family 43 89 1.3E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4373 b3d0bb9c058a3b4f4a6099962bf4a44f 229 Gene3D G3DSA:1.10.10.60 17 84 1.1E-10 T 14-10-2018 Amir_4373 b3d0bb9c058a3b4f4a6099962bf4a44f 229 SUPERFAMILY SSF46689 34 113 3.64E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 Gene3D G3DSA:1.10.630.10 2 398 1.1E-133 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 Pfam PF00067 Cytochrome P450 170 368 4.6E-24 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 SUPERFAMILY SSF48264 14 398 2.23E-100 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 PRINTS PR00359 B-class P450 signature 289 316 1.4E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 PRINTS PR00359 B-class P450 signature 317 332 1.4E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 PRINTS PR00359 B-class P450 signature 135 151 1.4E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 PRINTS PR00359 B-class P450 signature 88 99 1.4E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 PRINTS PR00359 B-class P450 signature 347 358 1.4E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 PRINTS PR00359 B-class P450 signature 338 347 1.4E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 PRINTS PR00359 B-class P450 signature 152 167 1.4E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 PRINTS PR00359 B-class P450 signature 190 212 1.4E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 PRINTS PR00359 B-class P450 signature 270 281 1.4E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 340 349 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 PRINTS PR00385 P450 superfamily signature 270 281 4.9E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 PRINTS PR00385 P450 superfamily signature 235 252 4.9E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 PRINTS PR00385 P450 superfamily signature 338 347 4.9E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4596 c4dbdc5aff5c373d57876e545fefe437 398 PRINTS PR00385 P450 superfamily signature 347 358 4.9E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3459 6b064ccd7fabd800c0dd494d1e83e41a 216 SUPERFAMILY SSF56784 10 203 7.29E-28 T 14-10-2018 IPR036412 HAD-like superfamily Amir_3459 6b064ccd7fabd800c0dd494d1e83e41a 216 Gene3D G3DSA:3.40.50.1000 11 206 5.7E-41 T 14-10-2018 IPR023214 HAD superfamily Amir_3459 6b064ccd7fabd800c0dd494d1e83e41a 216 Pfam PF00702 haloacid dehalogenase-like hydrolase 100 192 6.1E-7 T 14-10-2018 Amir_3459 6b064ccd7fabd800c0dd494d1e83e41a 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 101 193 1.3E-15 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_3459 6b064ccd7fabd800c0dd494d1e83e41a 216 Gene3D G3DSA:1.10.150.240 24 100 5.7E-41 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Amir_4693 a73ea01e821a238971eb117227fc085c 220 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 37 217 3.1E-28 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal Amir_4693 a73ea01e821a238971eb117227fc085c 220 Gene3D G3DSA:2.70.50.50 37 219 4.7E-55 T 14-10-2018 Amir_4693 a73ea01e821a238971eb117227fc085c 220 SUPERFAMILY SSF81296 37 220 1.4E-28 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_3983 ef945d61354d7cc64adbb68010d99f57 381 SUPERFAMILY SSF53187 5 380 5.5E-42 T 14-10-2018 Amir_3983 ef945d61354d7cc64adbb68010d99f57 381 Gene3D G3DSA:3.40.630.10 19 369 6.8E-102 T 14-10-2018 Amir_3983 ef945d61354d7cc64adbb68010d99f57 381 Pfam PF01546 Peptidase family M20/M25/M40 82 378 5.9E-22 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Amir_3983 ef945d61354d7cc64adbb68010d99f57 381 Pfam PF07687 Peptidase dimerisation domain 184 273 1.8E-16 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Amir_3983 ef945d61354d7cc64adbb68010d99f57 381 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 81 90 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Amir_3983 ef945d61354d7cc64adbb68010d99f57 381 PIRSF PIRSF037238 3 381 1.6E-115 T 14-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase Amir_3983 ef945d61354d7cc64adbb68010d99f57 381 Gene3D G3DSA:3.30.70.360 187 294 6.8E-102 T 14-10-2018 Amir_3983 ef945d61354d7cc64adbb68010d99f57 381 SUPERFAMILY SSF55031 187 282 1.24E-17 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amir_3196 8476d8cef16a3af811f93117d5fd32d2 388 Gene3D G3DSA:3.40.640.10 3 250 3.6E-81 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_3196 8476d8cef16a3af811f93117d5fd32d2 388 SUPERFAMILY SSF53383 11 385 3.26E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_3196 8476d8cef16a3af811f93117d5fd32d2 388 PIRSF PIRSF000390 7 388 1.4E-106 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Amir_3196 8476d8cef16a3af811f93117d5fd32d2 388 Gene3D G3DSA:3.90.1150.10 251 386 9.6E-35 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_3196 8476d8cef16a3af811f93117d5fd32d2 388 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 18 375 7.5E-111 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Amir_5178 b9049784b334190504bf39e32dcd54b5 323 Gene3D G3DSA:3.40.50.720 122 267 1.6E-111 T 14-10-2018 Amir_5178 b9049784b334190504bf39e32dcd54b5 323 Pfam PF00107 Zinc-binding dehydrogenase 150 253 1.9E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_5178 b9049784b334190504bf39e32dcd54b5 323 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 139 160 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Amir_5178 b9049784b334190504bf39e32dcd54b5 323 Gene3D G3DSA:3.90.180.10 10 319 1.6E-111 T 14-10-2018 Amir_5178 b9049784b334190504bf39e32dcd54b5 323 SUPERFAMILY SSF50129 3 143 1.51E-34 T 14-10-2018 IPR011032 GroES-like superfamily Amir_5178 b9049784b334190504bf39e32dcd54b5 323 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 86 2.6E-10 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_5178 b9049784b334190504bf39e32dcd54b5 323 SMART SM00829 11 321 3.5E-19 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_5178 b9049784b334190504bf39e32dcd54b5 323 SUPERFAMILY SSF51735 110 267 7.64E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3361 0d2a9e0c344196fa09005efb141c498d 168 SUPERFAMILY SSF55729 6 167 4.8E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_3361 0d2a9e0c344196fa09005efb141c498d 168 Gene3D G3DSA:3.40.630.30 4 168 3.7E-48 T 14-10-2018 Amir_3361 0d2a9e0c344196fa09005efb141c498d 168 Pfam PF13420 Acetyltransferase (GNAT) domain 8 161 1.4E-22 T 14-10-2018 Amir_4123 1795ad01191ee9d43d08e0f0edcca5f8 433 SUPERFAMILY SSF51621 167 375 9.42E-28 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Amir_4123 1795ad01191ee9d43d08e0f0edcca5f8 433 SUPERFAMILY SSF52009 22 75 1.44E-8 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Amir_4123 1795ad01191ee9d43d08e0f0edcca5f8 433 Gene3D G3DSA:3.50.30.10 8 96 1.3E-6 T 14-10-2018 Amir_4123 1795ad01191ee9d43d08e0f0edcca5f8 433 Pfam PF00391 PEP-utilising enzyme, mobile domain 23 75 1.0E-8 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Amir_4123 1795ad01191ee9d43d08e0f0edcca5f8 433 Gene3D G3DSA:3.20.20.60 132 418 8.4E-31 T 14-10-2018 Amir_4123 1795ad01191ee9d43d08e0f0edcca5f8 433 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 184 360 1.1E-18 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Amir_1063 1633bb221b129bfc5d93c110f877bed7 516 Pfam PF03703 Bacterial PH domain 426 498 1.2E-10 T 14-10-2018 IPR005182 Domain of unknown function DUF304 Amir_1063 1633bb221b129bfc5d93c110f877bed7 516 Pfam PF03703 Bacterial PH domain 90 149 4.9E-12 T 14-10-2018 IPR005182 Domain of unknown function DUF304 Amir_1063 1633bb221b129bfc5d93c110f877bed7 516 PIRSF PIRSF026631 32 508 2.5E-73 T 14-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 Amir_6736 47ef68832882917699d7237a5d579385 217 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 53 211 6.5E-28 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_6736 47ef68832882917699d7237a5d579385 217 Gene3D G3DSA:1.10.1740.10 34 122 5.7E-24 T 14-10-2018 Amir_6736 47ef68832882917699d7237a5d579385 217 Pfam PF08281 Sigma-70, region 4 156 208 1.5E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_6736 47ef68832882917699d7237a5d579385 217 SUPERFAMILY SSF88946 38 141 1.18E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6736 47ef68832882917699d7237a5d579385 217 SUPERFAMILY SSF88659 150 212 4.67E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_6736 47ef68832882917699d7237a5d579385 217 Pfam PF04542 Sigma-70 region 2 58 125 5.3E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6736 47ef68832882917699d7237a5d579385 217 Gene3D G3DSA:1.10.10.10 135 214 1.6E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5024 d85e53d05d1cd9f59139dca7c752f658 188 Gene3D G3DSA:1.10.10.10 119 188 1.3E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5024 d85e53d05d1cd9f59139dca7c752f658 188 Gene3D G3DSA:1.10.1740.10 20 98 6.0E-16 T 14-10-2018 Amir_5024 d85e53d05d1cd9f59139dca7c752f658 188 SUPERFAMILY SSF88659 121 185 1.64E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5024 d85e53d05d1cd9f59139dca7c752f658 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 184 9.0E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_5024 d85e53d05d1cd9f59139dca7c752f658 188 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 56 88 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_5024 d85e53d05d1cd9f59139dca7c752f658 188 Pfam PF04545 Sigma-70, region 4 133 182 3.0E-11 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amir_5024 d85e53d05d1cd9f59139dca7c752f658 188 SUPERFAMILY SSF88946 14 116 7.46E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5024 d85e53d05d1cd9f59139dca7c752f658 188 Pfam PF04542 Sigma-70 region 2 33 101 1.2E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_1499 51e44e88a2b53db60ad6ae57bf41764f 302 Gene3D G3DSA:3.40.1790.10 3 302 1.1E-115 T 14-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Amir_1499 51e44e88a2b53db60ad6ae57bf41764f 302 SUPERFAMILY SSF110581 7 300 7.32E-101 T 14-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Amir_1499 51e44e88a2b53db60ad6ae57bf41764f 302 Pfam PF04227 Indigoidine synthase A like protein 9 299 3.6E-117 T 14-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Amir_1499 51e44e88a2b53db60ad6ae57bf41764f 302 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 8 302 39.293 T 14-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Amir_1949 f8639cde62456c728313d32c1e84cc54 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 257 1.6E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_1949 f8639cde62456c728313d32c1e84cc54 259 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 50 253 1.2E-72 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 Amir_1949 f8639cde62456c728313d32c1e84cc54 259 SUPERFAMILY SSF161098 3 252 1.42E-54 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1949 f8639cde62456c728313d32c1e84cc54 259 Gene3D G3DSA:1.10.3720.10 6 257 2.1E-69 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1949 f8639cde62456c728313d32c1e84cc54 259 TIGRFAM TIGR01581 Mo_ABC_porter: NifC-like ABC-type porter 27 249 1.6E-72 T 14-10-2018 IPR006469 NifC-like ABC-type porter GO:0005215|GO:0016020|GO:0055085 Amir_2105 67d55dffc5014393da83bccd44ba6b82 513 Gene3D G3DSA:3.40.605.10 39 474 4.5E-152 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_2105 67d55dffc5014393da83bccd44ba6b82 513 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 290 301 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Amir_2105 67d55dffc5014393da83bccd44ba6b82 513 Gene3D G3DSA:3.40.309.10 265 466 4.5E-152 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_2105 67d55dffc5014393da83bccd44ba6b82 513 SUPERFAMILY SSF53720 18 499 4.06E-148 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_2105 67d55dffc5014393da83bccd44ba6b82 513 Pfam PF00171 Aldehyde dehydrogenase family 29 493 1.4E-140 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_2105 67d55dffc5014393da83bccd44ba6b82 513 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 21 497 5.4E-215 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 Amir_0523 f8c484e3203acf99608159960b5171c8 290 Gene3D G3DSA:2.70.98.10 4 288 4.8E-73 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Amir_0523 f8c484e3203acf99608159960b5171c8 290 SUPERFAMILY SSF74650 4 284 4.52E-57 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Amir_0523 f8c484e3203acf99608159960b5171c8 290 Pfam PF01263 Aldose 1-epimerase 2 283 4.4E-41 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 Amir_2165 beb95d5dbc6499d29d3b2f8b6b261e38 122 Pfam PF02810 SEC-C motif 3 17 6.3E-5 T 14-10-2018 IPR004027 SEC-C motif Amir_2165 beb95d5dbc6499d29d3b2f8b6b261e38 122 Gene3D G3DSA:3.10.450.50 1 121 6.5E-37 T 14-10-2018 Amir_2165 beb95d5dbc6499d29d3b2f8b6b261e38 122 SUPERFAMILY SSF54427 22 119 1.29E-33 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_0391 8f6fa07b317cbbc1734ace37508b98d6 313 Gene3D G3DSA:3.30.420.40 115 285 3.0E-51 T 14-10-2018 Amir_0391 8f6fa07b317cbbc1734ace37508b98d6 313 SUPERFAMILY SSF53067 1 113 2.45E-13 T 14-10-2018 Amir_0391 8f6fa07b317cbbc1734ace37508b98d6 313 SUPERFAMILY SSF53067 117 300 1.58E-29 T 14-10-2018 Amir_0391 8f6fa07b317cbbc1734ace37508b98d6 313 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 297 8.6E-20 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Amir_0391 8f6fa07b317cbbc1734ace37508b98d6 313 Gene3D G3DSA:3.30.420.40 4 297 3.0E-51 T 14-10-2018 Amir_2064 8afacc3b15ac967d02ce4b87fd07536f 322 Gene3D G3DSA:2.120.10.30 35 230 5.1E-15 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_2064 8afacc3b15ac967d02ce4b87fd07536f 322 SUPERFAMILY SSF63829 48 302 2.03E-24 T 14-10-2018 Amir_2109 1e631497361da26dc150e659ba0bd571 204 Gene3D G3DSA:3.40.50.880 1 203 5.0E-73 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_2109 1e631497361da26dc150e659ba0bd571 204 PIRSF PIRSF005639 1 203 7.7E-72 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Amir_2109 1e631497361da26dc150e659ba0bd571 204 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 4 196 6.8E-72 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Amir_2109 1e631497361da26dc150e659ba0bd571 204 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 198 38.142 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Amir_2109 1e631497361da26dc150e659ba0bd571 204 Pfam PF01174 SNO glutamine amidotransferase family 6 199 5.6E-56 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Amir_2109 1e631497361da26dc150e659ba0bd571 204 SUPERFAMILY SSF52317 3 200 6.81E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_2109 1e631497361da26dc150e659ba0bd571 204 ProSitePatterns PS01236 PdxT/SNO family family signature. 41 51 - T 14-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Amir_1873 2c039e4f253a6694b8355ac689041fc9 1075 Gene3D G3DSA:1.20.1050.60 361 457 1.8E-253 T 14-10-2018 Amir_1873 2c039e4f253a6694b8355ac689041fc9 1075 Gene3D G3DSA:3.30.2080.10 308 764 1.8E-253 T 14-10-2018 Amir_1873 2c039e4f253a6694b8355ac689041fc9 1075 SUPERFAMILY SSF48208 273 748 1.59E-25 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_1873 2c039e4f253a6694b8355ac689041fc9 1075 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 822 876 9.6E-8 T 14-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain Amir_1873 2c039e4f253a6694b8355ac689041fc9 1075 Pfam PF07971 Glycosyl hydrolase family 92 250 760 4.9E-151 T 14-10-2018 IPR012939 Glycosyl hydrolase family 92 Amir_1873 2c039e4f253a6694b8355ac689041fc9 1075 Gene3D G3DSA:1.20.1610.10 458 638 1.8E-253 T 14-10-2018 Amir_1873 2c039e4f253a6694b8355ac689041fc9 1075 Gene3D G3DSA:2.70.98.10 41 360 1.8E-253 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Amir_1873 2c039e4f253a6694b8355ac689041fc9 1075 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 20 763 1.1E-175 T 14-10-2018 IPR005887 Alpha-1,2-mannosidase, putative Amir_1873 2c039e4f253a6694b8355ac689041fc9 1075 Gene3D G3DSA:2.60.40.10 793 889 4.6E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_4948 26068f781014f0545af0cd92d60dd8ac 271 Pfam PF04240 Carotenoid biosynthesis protein 51 208 7.2E-34 T 14-10-2018 IPR007354 Carotene biosynthesis associated membrane protein Amir_1378 44910e6a6cabe24df119abf081395ff4 578 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 26 197 2.4E-31 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amir_1378 44910e6a6cabe24df119abf081395ff4 578 Gene3D G3DSA:3.40.1440.10 217 316 3.2E-24 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Amir_1378 44910e6a6cabe24df119abf081395ff4 578 SMART SM00479 30 198 6.6E-48 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Amir_1378 44910e6a6cabe24df119abf081395ff4 578 Pfam PF01541 GIY-YIG catalytic domain 233 307 6.9E-6 T 14-10-2018 IPR000305 GIY-YIG endonuclease Amir_1378 44910e6a6cabe24df119abf081395ff4 578 SUPERFAMILY SSF53098 25 209 1.1E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_1378 44910e6a6cabe24df119abf081395ff4 578 Pfam PF00929 Exonuclease 32 189 2.0E-35 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Amir_1378 44910e6a6cabe24df119abf081395ff4 578 SMART SM00465 231 312 3.2E-11 T 14-10-2018 IPR000305 GIY-YIG endonuclease Amir_1378 44910e6a6cabe24df119abf081395ff4 578 Gene3D G3DSA:3.30.420.10 25 199 1.6E-50 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amir_1378 44910e6a6cabe24df119abf081395ff4 578 SUPERFAMILY SSF82771 231 311 8.24E-16 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Amir_6931 5b08b45873370f6d1f982ed2e1987fee 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 43 8.9E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_6931 5b08b45873370f6d1f982ed2e1987fee 315 Gene3D G3DSA:3.40.50.2300 60 304 9.3E-62 T 14-10-2018 Amir_6931 5b08b45873370f6d1f982ed2e1987fee 315 SMART SM00354 1 68 9.5E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_6931 5b08b45873370f6d1f982ed2e1987fee 315 SUPERFAMILY SSF47413 1 56 7.88E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_6931 5b08b45873370f6d1f982ed2e1987fee 315 Gene3D G3DSA:3.40.50.2300 156 309 9.3E-62 T 14-10-2018 Amir_6931 5b08b45873370f6d1f982ed2e1987fee 315 Gene3D G3DSA:1.10.260.40 1 56 1.2E-18 T 14-10-2018 Amir_6931 5b08b45873370f6d1f982ed2e1987fee 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 14-10-2018 Amir_6931 5b08b45873370f6d1f982ed2e1987fee 315 SUPERFAMILY SSF53822 57 313 1.32E-55 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_6931 5b08b45873370f6d1f982ed2e1987fee 315 Pfam PF13377 Periplasmic binding protein-like domain 164 312 1.6E-29 T 14-10-2018 Amir_5500 b39b3bf417a9717a4dcd69144ac8fc08 400 Gene3D G3DSA:1.10.260.40 20 79 2.4E-7 T 14-10-2018 Amir_5500 b39b3bf417a9717a4dcd69144ac8fc08 400 SUPERFAMILY SSF47413 21 79 4.79E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_5500 b39b3bf417a9717a4dcd69144ac8fc08 400 SMART SM00530 23 79 2.2E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_5500 b39b3bf417a9717a4dcd69144ac8fc08 400 Pfam PF13560 Helix-turn-helix domain 22 78 2.8E-9 T 14-10-2018 Amir_5500 b39b3bf417a9717a4dcd69144ac8fc08 400 Gene3D G3DSA:1.25.40.10 144 383 4.0E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_1082 30a8ba99d8e426917efb4549797afc65 542 SUPERFAMILY SSF53720 8 526 1.83E-124 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_1082 30a8ba99d8e426917efb4549797afc65 542 Gene3D G3DSA:3.40.309.10 297 494 8.6E-201 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_1082 30a8ba99d8e426917efb4549797afc65 542 TIGRFAM TIGR01236 D1pyr5carbox1: 1-pyrroline-5-carboxylate dehydrogenase 12 540 9.5E-245 T 14-10-2018 IPR005931 Delta-1-pyrroline-5-carboxylate dehydrogenase GO:0003842|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853|Reactome: R-HSA-389661|Reactome: R-HSA-70688 Amir_1082 30a8ba99d8e426917efb4549797afc65 542 Pfam PF00171 Aldehyde dehydrogenase family 56 520 3.2E-99 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_1082 30a8ba99d8e426917efb4549797afc65 542 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 320 331 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Amir_1082 30a8ba99d8e426917efb4549797afc65 542 Gene3D G3DSA:3.40.605.10 14 526 8.6E-201 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_6988 25d360ec464092ba78685a3a2d43c2f5 265 PIRSF PIRSF039085 17 260 1.2E-113 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Amir_6988 25d360ec464092ba78685a3a2d43c2f5 265 SUPERFAMILY SSF52540 21 254 1.57E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6988 25d360ec464092ba78685a3a2d43c2f5 265 SMART SM00382 45 233 8.3E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6988 25d360ec464092ba78685a3a2d43c2f5 265 Pfam PF00005 ABC transporter 36 184 5.8E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6988 25d360ec464092ba78685a3a2d43c2f5 265 Gene3D G3DSA:3.40.50.300 20 259 2.9E-76 T 14-10-2018 Amir_6988 25d360ec464092ba78685a3a2d43c2f5 265 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0123 945aed0564b0d0a6e6981c9e7711064b 350 SUPERFAMILY SSF53448 8 186 2.57E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0123 945aed0564b0d0a6e6981c9e7711064b 350 Pfam PF00535 Glycosyl transferase family 2 14 176 8.7E-24 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_0123 945aed0564b0d0a6e6981c9e7711064b 350 Gene3D G3DSA:3.90.550.10 4 221 9.6E-26 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_5686 de5fb0ab115cc5eef8adceb7b7458251 310 Pfam PF13622 Thioesterase-like superfamily 57 305 3.6E-63 T 14-10-2018 Amir_5686 de5fb0ab115cc5eef8adceb7b7458251 310 Gene3D G3DSA:3.10.129.90 29 308 9.3E-109 T 14-10-2018 Amir_5686 de5fb0ab115cc5eef8adceb7b7458251 310 SUPERFAMILY SSF54637 30 140 1.65E-41 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_5686 de5fb0ab115cc5eef8adceb7b7458251 310 SUPERFAMILY SSF54637 142 307 6.22E-53 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_5686 de5fb0ab115cc5eef8adceb7b7458251 310 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 38 307 1.7E-91 T 14-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 Amir_5665 fdae467f85b20b3052430e2f45e886e3 373 Pfam PF02515 CoA-transferase family III 5 349 3.0E-83 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 Amir_5665 fdae467f85b20b3052430e2f45e886e3 373 Gene3D G3DSA:3.30.1540.10 216 299 1.3E-29 T 14-10-2018 Amir_5665 fdae467f85b20b3052430e2f45e886e3 373 Gene3D G3DSA:3.30.60.110 301 332 6.0E-8 T 14-10-2018 Amir_5665 fdae467f85b20b3052430e2f45e886e3 373 SUPERFAMILY SSF89796 3 372 6.8E-121 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Amir_5665 fdae467f85b20b3052430e2f45e886e3 373 Gene3D G3DSA:3.40.50.10540 1 215 4.6E-76 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Amir_6409 6c7b0ae4df013925ad2c9f5837cc228c 504 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 365 385 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amir_6409 6c7b0ae4df013925ad2c9f5837cc228c 504 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 254 1.7E-73 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Amir_6409 6c7b0ae4df013925ad2c9f5837cc228c 504 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amir_6409 6c7b0ae4df013925ad2c9f5837cc228c 504 Gene3D G3DSA:3.30.420.40 256 504 7.6E-95 T 14-10-2018 Amir_6409 6c7b0ae4df013925ad2c9f5837cc228c 504 SUPERFAMILY SSF53067 257 500 7.34E-84 T 14-10-2018 Amir_6409 6c7b0ae4df013925ad2c9f5837cc228c 504 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 453 2.7E-66 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Amir_6409 6c7b0ae4df013925ad2c9f5837cc228c 504 SUPERFAMILY SSF53067 3 257 2.85E-88 T 14-10-2018 Amir_6409 6c7b0ae4df013925ad2c9f5837cc228c 504 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 499 2.4E-225 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Amir_6409 6c7b0ae4df013925ad2c9f5837cc228c 504 Gene3D G3DSA:3.30.420.40 2 255 2.3E-108 T 14-10-2018 Amir_6409 6c7b0ae4df013925ad2c9f5837cc228c 504 PIRSF PIRSF000538 2 504 1.2E-170 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amir_6409 6c7b0ae4df013925ad2c9f5837cc228c 504 Hamap MF_00186 Glycerol kinase [glpK]. 2 500 56.021 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Amir_1263 bf4462e898e14200ab6a6b2eca54a578 127 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 63 1.4E-11 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Amir_1263 bf4462e898e14200ab6a6b2eca54a578 127 SUPERFAMILY SSF54909 3 63 3.72E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_1263 bf4462e898e14200ab6a6b2eca54a578 127 Gene3D G3DSA:3.30.70.100 1 98 5.4E-15 T 14-10-2018 Amir_1745 32cf35ebb79202690210a7da309689c7 406 Gene3D G3DSA:3.40.50.2000 228 375 2.5E-26 T 14-10-2018 Amir_1745 32cf35ebb79202690210a7da309689c7 406 SUPERFAMILY SSF53756 74 399 2.15E-14 T 14-10-2018 Amir_1745 32cf35ebb79202690210a7da309689c7 406 Gene3D G3DSA:3.40.50.11090 69 200 3.4E-12 T 14-10-2018 Amir_1007 54027f98609d88916932017af0633f6d 204 Gene3D G3DSA:3.60.70.12 11 133 4.1E-23 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amir_1007 54027f98609d88916932017af0633f6d 204 SUPERFAMILY SSF56266 25 197 2.17E-10 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amir_0938 46ef383bcb461d3797de4bd05c1ce0fd 480 SUPERFAMILY SSF55486 55 406 1.9E-112 T 14-10-2018 Amir_0938 46ef383bcb461d3797de4bd05c1ce0fd 480 TIGRFAM TIGR03624 TIGR03624: putative hydrolase 56 406 1.2E-115 T 14-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 Amir_0938 46ef383bcb461d3797de4bd05c1ce0fd 480 Pfam PF10103 Zincin-like metallopeptidase 56 403 1.8E-115 T 14-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 Amir_7100 a7cafe7569771a74b4c793799d23e6f7 47 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 5 47 4.8E-20 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7100 a7cafe7569771a74b4c793799d23e6f7 47 Pfam PF00468 Ribosomal protein L34 5 47 2.5E-20 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7100 a7cafe7569771a74b4c793799d23e6f7 47 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 5 45 1.0E-13 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7100 a7cafe7569771a74b4c793799d23e6f7 47 ProSitePatterns PS00784 Ribosomal protein L34 signature. 5 24 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_7100 a7cafe7569771a74b4c793799d23e6f7 47 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 4 47 15.563 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5280 5fcdd2c62816042e882eb52f26740a68 573 Pfam PF00474 Sodium:solute symporter family 34 200 6.1E-27 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Amir_5280 5fcdd2c62816042e882eb52f26740a68 573 Pfam PF00474 Sodium:solute symporter family 306 497 6.3E-12 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Amir_5280 5fcdd2c62816042e882eb52f26740a68 573 Gene3D G3DSA:1.20.1730.10 258 560 9.7E-17 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Amir_5280 5fcdd2c62816042e882eb52f26740a68 573 Gene3D G3DSA:1.20.1730.10 9 230 4.2E-28 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Amir_5280 5fcdd2c62816042e882eb52f26740a68 573 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 479 499 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site Amir_6813 e3aeab5a75e45da824354a53fb441f15 285 SMART SM00267 81 260 1.9E-42 T 14-10-2018 IPR000160 GGDEF domain Amir_6813 e3aeab5a75e45da824354a53fb441f15 285 Gene3D G3DSA:3.30.70.270 78 261 2.9E-47 T 14-10-2018 Amir_6813 e3aeab5a75e45da824354a53fb441f15 285 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 90 259 6.3E-40 T 14-10-2018 IPR000160 GGDEF domain Amir_6813 e3aeab5a75e45da824354a53fb441f15 285 Pfam PF00990 Diguanylate cyclase, GGDEF domain 93 255 2.3E-34 T 14-10-2018 IPR000160 GGDEF domain Amir_6813 e3aeab5a75e45da824354a53fb441f15 285 SUPERFAMILY SSF55073 97 259 6.12E-39 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_1692 7624fbdaaa1ddf5e63c70db06c100ae7 330 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 2.9E-33 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Amir_1692 7624fbdaaa1ddf5e63c70db06c100ae7 330 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 155 44.597 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Amir_1692 7624fbdaaa1ddf5e63c70db06c100ae7 330 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 1.8E-38 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Amir_1692 7624fbdaaa1ddf5e63c70db06c100ae7 330 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 1.8E-38 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Amir_1692 7624fbdaaa1ddf5e63c70db06c100ae7 330 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.8E-38 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Amir_1692 7624fbdaaa1ddf5e63c70db06c100ae7 330 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 152 1.8E-38 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Amir_1692 7624fbdaaa1ddf5e63c70db06c100ae7 330 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 1.8E-38 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Amir_1692 7624fbdaaa1ddf5e63c70db06c100ae7 330 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 114 149 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 Amir_1692 7624fbdaaa1ddf5e63c70db06c100ae7 330 SUPERFAMILY SSF53098 2 157 4.05E-43 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_1692 7624fbdaaa1ddf5e63c70db06c100ae7 330 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 152 5.6E-56 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Amir_1692 7624fbdaaa1ddf5e63c70db06c100ae7 330 Gene3D G3DSA:3.30.420.10 1 162 1.5E-47 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amir_2993 479c523b9d3f8b44d4c2c360beab16db 295 Pfam PF13649 Methyltransferase domain 64 160 1.2E-14 T 14-10-2018 Amir_2993 479c523b9d3f8b44d4c2c360beab16db 295 Gene3D G3DSA:3.40.50.150 9 295 1.9E-32 T 14-10-2018 Amir_2993 479c523b9d3f8b44d4c2c360beab16db 295 SUPERFAMILY SSF53335 42 248 4.76E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_2921 d405dae7c597ec04257088ff5644962a 651 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 17 364 2.3E-111 T 14-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 Amir_6832 2278685da796ea2d2da6c971db2ab3d7 200 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 1 189 1.8E-61 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Amir_6832 2278685da796ea2d2da6c971db2ab3d7 200 SUPERFAMILY SSF50891 78 200 1.4E-38 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Amir_6832 2278685da796ea2d2da6c971db2ab3d7 200 SMART SM00796 1 189 1.2E-78 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Amir_6832 2278685da796ea2d2da6c971db2ab3d7 200 SUPERFAMILY SSF160467 2 82 4.18E-8 T 14-10-2018 Amir_6832 2278685da796ea2d2da6c971db2ab3d7 200 Gene3D G3DSA:3.30.1360.40 1 73 2.2E-17 T 14-10-2018 Amir_6832 2278685da796ea2d2da6c971db2ab3d7 200 Gene3D G3DSA:2.40.100.10 74 200 8.9E-53 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Amir_0824 5217e94cebd86493d57a7890fdad0a14 609 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 200 208 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Amir_0824 5217e94cebd86493d57a7890fdad0a14 609 SMART SM00487 71 271 5.2E-55 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_0824 5217e94cebd86493d57a7890fdad0a14 609 SMART SM00490 307 388 1.5E-32 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_0824 5217e94cebd86493d57a7890fdad0a14 609 Pfam PF00271 Helicase conserved C-terminal domain 279 388 1.1E-28 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_0824 5217e94cebd86493d57a7890fdad0a14 609 SUPERFAMILY SSF52540 122 408 2.5E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0824 5217e94cebd86493d57a7890fdad0a14 609 Gene3D G3DSA:3.40.50.300 28 256 5.5E-71 T 14-10-2018 Amir_0824 5217e94cebd86493d57a7890fdad0a14 609 Pfam PF00270 DEAD/DEAH box helicase 77 237 1.5E-51 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amir_0824 5217e94cebd86493d57a7890fdad0a14 609 Gene3D G3DSA:3.40.50.300 264 433 2.6E-47 T 14-10-2018 Amir_1118 b2d2b08a15842a91186aa898624f69dd 384 SUPERFAMILY SSF56349 76 361 1.77E-43 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amir_1118 b2d2b08a15842a91186aa898624f69dd 384 Pfam PF00589 Phage integrase family 214 360 3.0E-18 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amir_1118 b2d2b08a15842a91186aa898624f69dd 384 Gene3D G3DSA:1.10.443.10 201 375 1.8E-32 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amir_1118 b2d2b08a15842a91186aa898624f69dd 384 Gene3D G3DSA:1.10.150.130 71 179 4.3E-13 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Amir_6025 ca135a8d2f5856dc70b37d672b7bf8f0 283 Pfam PF07681 DoxX 130 214 5.8E-17 T 14-10-2018 IPR032808 DoxX family Amir_6107 bd9a7f9c079ac316138f548cf60f06a0 231 SUPERFAMILY SSF53474 5 225 3.6E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6107 bd9a7f9c079ac316138f548cf60f06a0 231 Pfam PF12697 Alpha/beta hydrolase family 6 221 1.0E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_6107 bd9a7f9c079ac316138f548cf60f06a0 231 PRINTS PR00111 Alpha/beta hydrolase fold signature 173 187 3.8E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_6107 bd9a7f9c079ac316138f548cf60f06a0 231 PRINTS PR00111 Alpha/beta hydrolase fold signature 76 89 3.8E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_6107 bd9a7f9c079ac316138f548cf60f06a0 231 PRINTS PR00111 Alpha/beta hydrolase fold signature 62 75 3.8E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_6107 bd9a7f9c079ac316138f548cf60f06a0 231 Gene3D G3DSA:3.40.50.1820 2 229 1.7E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6282 550243a5850e12ca31ab4e5f040ae889 138 Gene3D G3DSA:1.20.120.400 20 138 3.0E-47 T 14-10-2018 IPR036502 Nickel-containing superoxide dismutase superfamily MetaCyc: PWY-6854 Amir_6282 550243a5850e12ca31ab4e5f040ae889 138 TIGRFAM TIGR02753 sodN: superoxide dismutase, Ni 12 137 1.7E-48 T 14-10-2018 IPR014123 Superoxide dismutase, Nickel-type GO:0004784|GO:0016151|GO:0016209 MetaCyc: PWY-6854 Amir_6282 550243a5850e12ca31ab4e5f040ae889 138 Pfam PF09055 Nickel-containing superoxide dismutase 16 136 2.6E-45 T 14-10-2018 IPR014123 Superoxide dismutase, Nickel-type GO:0004784|GO:0016151|GO:0016209 MetaCyc: PWY-6854 Amir_6282 550243a5850e12ca31ab4e5f040ae889 138 SUPERFAMILY SSF109770 20 137 2.62E-52 T 14-10-2018 IPR036502 Nickel-containing superoxide dismutase superfamily MetaCyc: PWY-6854 Amir_0033 e7f4c36a9b081802fa923460b7169072 420 Pfam PF00232 Glycosyl hydrolase family 1 5 418 3.7E-113 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_0033 e7f4c36a9b081802fa923460b7169072 420 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 404 3.8E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_0033 e7f4c36a9b081802fa923460b7169072 420 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 385 3.8E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_0033 e7f4c36a9b081802fa923460b7169072 420 PRINTS PR00131 Glycosyl hydrolase family 1 signature 337 345 3.8E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_0033 e7f4c36a9b081802fa923460b7169072 420 PRINTS PR00131 Glycosyl hydrolase family 1 signature 273 287 3.8E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Amir_0033 e7f4c36a9b081802fa923460b7169072 420 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 6 20 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site Amir_0033 e7f4c36a9b081802fa923460b7169072 420 Gene3D G3DSA:3.20.20.80 2 420 4.2E-133 T 14-10-2018 Amir_0033 e7f4c36a9b081802fa923460b7169072 420 SUPERFAMILY SSF51445 4 419 2.06E-127 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_2119 5ddd5967c04eef12de2aadf6a600ede0 386 SUPERFAMILY SSF103473 3 373 4.58E-34 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2119 5ddd5967c04eef12de2aadf6a600ede0 386 Pfam PF07690 Major Facilitator Superfamily 208 371 3.6E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2119 5ddd5967c04eef12de2aadf6a600ede0 386 Pfam PF07690 Major Facilitator Superfamily 6 185 1.1E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2119 5ddd5967c04eef12de2aadf6a600ede0 386 Gene3D G3DSA:1.20.1250.20 2 377 1.6E-30 T 14-10-2018 Amir_5939 f76354bff92bf96a140477a036305705 293 Pfam PF01014 Uricase 9 128 2.0E-15 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Amir_5939 f76354bff92bf96a140477a036305705 293 Pfam PF01014 Uricase 138 272 8.6E-34 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Amir_5939 f76354bff92bf96a140477a036305705 293 PRINTS PR00093 Uricase signature 86 99 2.7E-19 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Amir_5939 f76354bff92bf96a140477a036305705 293 PRINTS PR00093 Uricase signature 144 160 2.7E-19 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Amir_5939 f76354bff92bf96a140477a036305705 293 PRINTS PR00093 Uricase signature 11 22 2.7E-19 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Amir_5939 f76354bff92bf96a140477a036305705 293 PRINTS PR00093 Uricase signature 50 64 2.7E-19 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Amir_5939 f76354bff92bf96a140477a036305705 293 PRINTS PR00093 Uricase signature 160 172 2.7E-19 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Amir_5939 f76354bff92bf96a140477a036305705 293 Gene3D G3DSA:3.10.270.10 1 293 2.8E-107 T 14-10-2018 Amir_5939 f76354bff92bf96a140477a036305705 293 TIGRFAM TIGR03383 urate_oxi: urate oxidase 6 274 2.4E-101 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Amir_5939 f76354bff92bf96a140477a036305705 293 PIRSF PIRSF000241 2 283 5.6E-95 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Amir_5939 f76354bff92bf96a140477a036305705 293 ProDom PD003367 URICASE OXIDOREDUCTASE URATE OXIDASE METABOLISM PURINE PEROXISOME ACETYLATION II DIRECT 174 277 6.0E-28 T 14-10-2018 Amir_5939 f76354bff92bf96a140477a036305705 293 SUPERFAMILY SSF55620 135 287 6.67E-55 T 14-10-2018 Amir_5939 f76354bff92bf96a140477a036305705 293 SUPERFAMILY SSF55620 3 126 3.78E-41 T 14-10-2018 Amir_5939 f76354bff92bf96a140477a036305705 293 ProSitePatterns PS00366 Uricase signature. 144 171 - T 14-10-2018 IPR019842 Uricase, conserved site GO:0004846|GO:0006144|GO:0055114 KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Amir_1615 aaf8c1984092055d8ab616c041ac2bab 255 SMART SM00563 82 194 8.7E-26 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_1615 aaf8c1984092055d8ab616c041ac2bab 255 SUPERFAMILY SSF69593 53 249 1.31E-33 T 14-10-2018 Amir_1615 aaf8c1984092055d8ab616c041ac2bab 255 Pfam PF01553 Acyltransferase 67 191 8.6E-18 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_4497 cbcfb240cacbd136f44de154356f9f9d 334 Pfam PF00288 GHMP kinases N terminal domain 114 145 2.3E-7 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Amir_4497 cbcfb240cacbd136f44de154356f9f9d 334 Gene3D G3DSA:3.30.230.10 50 186 8.2E-12 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amir_4497 cbcfb240cacbd136f44de154356f9f9d 334 SUPERFAMILY SSF54211 40 195 4.48E-17 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_4497 cbcfb240cacbd136f44de154356f9f9d 334 PIRSF PIRSF033887 27 319 2.5E-83 T 14-10-2018 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443 Amir_3914 049550ea780056ccc50335baefa022f0 274 Gene3D G3DSA:3.40.50.300 11 256 1.5E-69 T 14-10-2018 Amir_3914 049550ea780056ccc50335baefa022f0 274 SUPERFAMILY SSF52540 7 233 1.23E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3914 049550ea780056ccc50335baefa022f0 274 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3914 049550ea780056ccc50335baefa022f0 274 SMART SM00382 35 220 6.4E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3914 049550ea780056ccc50335baefa022f0 274 Pfam PF00005 ABC transporter 29 175 3.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3312 134fdc90f4db96c5bbfac512d50fbb1a 68 Gene3D G3DSA:3.30.429.10 1 61 2.1E-16 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily Amir_3312 134fdc90f4db96c5bbfac512d50fbb1a 68 SUPERFAMILY SSF55331 2 62 1.09E-12 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily Amir_3312 134fdc90f4db96c5bbfac512d50fbb1a 68 Pfam PF01361 Tautomerase enzyme 2 62 2.3E-19 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 Amir_6292 ed90fabf019ce7b2d8c1ce85195c9623 219 Gene3D G3DSA:1.10.1740.10 20 105 6.7E-36 T 14-10-2018 Amir_6292 ed90fabf019ce7b2d8c1ce85195c9623 219 SUPERFAMILY SSF88659 140 199 3.92E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_6292 ed90fabf019ce7b2d8c1ce85195c9623 219 TIGRFAM TIGR02947 SigH_actino: RNA polymerase sigma-70 factor, TIGR02947 family 23 210 7.5E-109 T 14-10-2018 IPR014293 RNA polymerase sigma-70, actinobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_6292 ed90fabf019ce7b2d8c1ce85195c9623 219 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 41 199 3.7E-27 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_6292 ed90fabf019ce7b2d8c1ce85195c9623 219 SUPERFAMILY SSF88946 29 117 8.83E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6292 ed90fabf019ce7b2d8c1ce85195c9623 219 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 58 89 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_6292 ed90fabf019ce7b2d8c1ce85195c9623 219 Gene3D G3DSA:1.10.10.10 136 204 4.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6292 ed90fabf019ce7b2d8c1ce85195c9623 219 Pfam PF04542 Sigma-70 region 2 41 103 3.3E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6292 ed90fabf019ce7b2d8c1ce85195c9623 219 Pfam PF08281 Sigma-70, region 4 145 195 1.3E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_2505 3817e3f4a2a897c2a1254c92ce70b183 246 Pfam PF00413 Matrixin 160 243 5.9E-6 T 14-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 Amir_2505 3817e3f4a2a897c2a1254c92ce70b183 246 Gene3D G3DSA:3.40.390.10 55 246 1.4E-16 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Amir_2505 3817e3f4a2a897c2a1254c92ce70b183 246 SUPERFAMILY SSF55486 144 244 8.6E-12 T 14-10-2018 Amir_5793 14624d8c247891ca027814d6fd8384d7 237 Gene3D G3DSA:3.40.50.720 1 234 3.7E-32 T 14-10-2018 Amir_5793 14624d8c247891ca027814d6fd8384d7 237 Pfam PF00106 short chain dehydrogenase 3 186 4.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5793 14624d8c247891ca027814d6fd8384d7 237 SUPERFAMILY SSF51735 3 225 5.07E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 26 567 1.1E-191 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 Gene3D G3DSA:3.40.50.620 33 529 1.3E-293 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 810 874 7.1E-17 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 54 65 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 Pfam PF08264 Anticodon-binding domain of tRNA 610 751 9.1E-36 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 Gene3D G3DSA:1.10.730.10 13 741 1.3E-293 T 14-10-2018 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 PRINTS PR00986 Valyl-tRNA synthetase signature 239 256 4.7E-37 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 PRINTS PR00986 Valyl-tRNA synthetase signature 47 58 4.7E-37 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 PRINTS PR00986 Valyl-tRNA synthetase signature 479 497 4.7E-37 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 PRINTS PR00986 Valyl-tRNA synthetase signature 354 367 4.7E-37 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 PRINTS PR00986 Valyl-tRNA synthetase signature 448 469 4.7E-37 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 Gene3D G3DSA:1.10.287.380 803 875 4.4E-15 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 SUPERFAMILY SSF52374 12 578 2.13E-139 T 14-10-2018 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 Hamap MF_02004 Valine--tRNA ligase [valS]. 13 875 15.09 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 SUPERFAMILY SSF46589 810 874 3.19E-13 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 SUPERFAMILY SSF47323 581 823 7.66E-50 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 Gene3D G3DSA:3.90.740.10 186 350 1.3E-293 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 TIGRFAM TIGR00422 valS: valine--tRNA ligase 15 852 1.0E-304 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Amir_1165 a7a7c51bea4d58f7267786df17b16301 877 SUPERFAMILY SSF50677 203 342 1.27E-53 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Amir_3623 66d2b42bd1dc6fd8afe222ee502ec9f1 596 SUPERFAMILY SSF56801 17 593 1.15E-112 T 14-10-2018 Amir_3623 66d2b42bd1dc6fd8afe222ee502ec9f1 596 Pfam PF00501 AMP-binding enzyme 23 464 5.7E-94 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3623 66d2b42bd1dc6fd8afe222ee502ec9f1 596 Gene3D G3DSA:3.40.50.12780 323 457 4.4E-41 T 14-10-2018 Amir_3623 66d2b42bd1dc6fd8afe222ee502ec9f1 596 Gene3D G3DSA:3.40.50.12780 14 322 4.8E-51 T 14-10-2018 Amir_3623 66d2b42bd1dc6fd8afe222ee502ec9f1 596 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4575 233ab47a66e281395745cebf440b6995 236 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 63 173 8.4E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_4575 233ab47a66e281395745cebf440b6995 236 SUPERFAMILY SSF56784 4 210 1.28E-47 T 14-10-2018 IPR036412 HAD-like superfamily Amir_4575 233ab47a66e281395745cebf440b6995 236 Gene3D G3DSA:1.10.150.240 19 77 4.7E-44 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Amir_4575 233ab47a66e281395745cebf440b6995 236 Gene3D G3DSA:3.40.50.1000 7 194 4.7E-44 T 14-10-2018 IPR023214 HAD superfamily Amir_4575 233ab47a66e281395745cebf440b6995 236 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 179 9.1E-27 T 14-10-2018 Amir_4575 233ab47a66e281395745cebf440b6995 236 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 72 179 1.0E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_1920 4e38f9601d08139917086b9fd7a96b43 338 Pfam PF00069 Protein kinase domain 42 275 2.4E-38 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_1920 4e38f9601d08139917086b9fd7a96b43 338 SUPERFAMILY SSF56112 28 307 7.76E-60 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_1920 4e38f9601d08139917086b9fd7a96b43 338 Gene3D G3DSA:1.10.510.10 118 285 1.0E-38 T 14-10-2018 Amir_1920 4e38f9601d08139917086b9fd7a96b43 338 Gene3D G3DSA:3.30.200.20 6 117 7.9E-22 T 14-10-2018 Amir_1858 79f84e00adcdf506bd71c1934525d02b 505 Pfam PF04616 Glycosyl hydrolases family 43 64 360 1.4E-58 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Amir_1858 79f84e00adcdf506bd71c1934525d02b 505 SUPERFAMILY SSF110221 360 503 2.09E-21 T 14-10-2018 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily GO:0046373|GO:0046556 Amir_1858 79f84e00adcdf506bd71c1934525d02b 505 Pfam PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain 379 504 1.7E-16 T 14-10-2018 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain GO:0046373|GO:0046556 Amir_1858 79f84e00adcdf506bd71c1934525d02b 505 Gene3D G3DSA:2.115.10.20 59 369 1.8E-88 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_1858 79f84e00adcdf506bd71c1934525d02b 505 SUPERFAMILY SSF75005 60 361 6.81E-59 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_1858 79f84e00adcdf506bd71c1934525d02b 505 Gene3D G3DSA:2.80.10.50 370 505 3.3E-28 T 14-10-2018 Amir_0861 fb6b996d895ac29998a89a208d206e0b 179 SUPERFAMILY SSF160904 4 163 1.31E-33 T 14-10-2018 Amir_0861 fb6b996d895ac29998a89a208d206e0b 179 Pfam PF07336 Putative stress-induced transcription regulator 8 114 2.0E-5 T 14-10-2018 IPR010852 Putative stress-induced transcription regulator Amir_0861 fb6b996d895ac29998a89a208d206e0b 179 Pfam PF11706 CGNR zinc finger 121 163 6.2E-16 T 14-10-2018 IPR021005 Zinc finger, CGNR Amir_0861 fb6b996d895ac29998a89a208d206e0b 179 Gene3D G3DSA:1.10.3300.10 8 165 7.6E-18 T 14-10-2018 IPR023286 ABATE domain superfamily Amir_7029 b0bb2eafe26501d6c8ed66179a3c747b 213 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 181 3.9E-21 T 14-10-2018 Amir_7029 b0bb2eafe26501d6c8ed66179a3c747b 213 SUPERFAMILY SSF56784 1 210 6.48E-47 T 14-10-2018 IPR036412 HAD-like superfamily Amir_7029 b0bb2eafe26501d6c8ed66179a3c747b 213 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 180 6.6E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_7029 b0bb2eafe26501d6c8ed66179a3c747b 213 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 164 1.6E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_7029 b0bb2eafe26501d6c8ed66179a3c747b 213 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 1.6E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_7029 b0bb2eafe26501d6c8ed66179a3c747b 213 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 126 142 1.6E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_7029 b0bb2eafe26501d6c8ed66179a3c747b 213 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 171 184 1.6E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_7029 b0bb2eafe26501d6c8ed66179a3c747b 213 Gene3D G3DSA:3.40.50.1000 4 184 1.2E-46 T 14-10-2018 IPR023214 HAD superfamily Amir_7029 b0bb2eafe26501d6c8ed66179a3c747b 213 Gene3D G3DSA:1.10.150.240 14 83 1.2E-46 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Amir_2457 ef4184ad12e10220aea577b761aba877 562 Gene3D G3DSA:3.40.190.10 49 303 1.1E-41 T 14-10-2018 Amir_2457 ef4184ad12e10220aea577b761aba877 562 PIRSF PIRSF002741 5 559 1.7E-71 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amir_2457 ef4184ad12e10220aea577b761aba877 562 SUPERFAMILY SSF53850 41 550 2.53E-95 T 14-10-2018 Amir_2457 ef4184ad12e10220aea577b761aba877 562 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 478 3.8E-66 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Amir_2457 ef4184ad12e10220aea577b761aba877 562 Gene3D G3DSA:3.10.105.10 308 532 3.7E-65 T 14-10-2018 Amir_3315 477c78a02bdca6be30625f020087acf2 393 Gene3D G3DSA:3.30.565.10 263 387 9.6E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3315 477c78a02bdca6be30625f020087acf2 393 Pfam PF07730 Histidine kinase 187 252 4.7E-17 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_3315 477c78a02bdca6be30625f020087acf2 393 SUPERFAMILY SSF55874 295 387 1.15E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1611 87bb6d72f27d207afd2a414fe51a4716 402 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 350 360 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_1611 87bb6d72f27d207afd2a414fe51a4716 402 Gene3D G3DSA:3.40.50.200 94 402 1.4E-65 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_1611 87bb6d72f27d207afd2a414fe51a4716 402 SUPERFAMILY SSF52743 125 401 9.16E-62 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_1611 87bb6d72f27d207afd2a414fe51a4716 402 PRINTS PR00723 Subtilisin serine protease family (S8) signature 174 187 5.8E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1611 87bb6d72f27d207afd2a414fe51a4716 402 PRINTS PR00723 Subtilisin serine protease family (S8) signature 349 365 5.8E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1611 87bb6d72f27d207afd2a414fe51a4716 402 PRINTS PR00723 Subtilisin serine protease family (S8) signature 137 156 5.8E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1611 87bb6d72f27d207afd2a414fe51a4716 402 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 142 153 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_1611 87bb6d72f27d207afd2a414fe51a4716 402 Pfam PF00082 Subtilase family 137 374 1.5E-36 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_7009 6730d2e786e57ff8bd238a48cb028289 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.0E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_7009 6730d2e786e57ff8bd238a48cb028289 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.0E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_7009 6730d2e786e57ff8bd238a48cb028289 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.0E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_7009 6730d2e786e57ff8bd238a48cb028289 218 SMART SM00448 2 114 2.0E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_7009 6730d2e786e57ff8bd238a48cb028289 218 Pfam PF00072 Response regulator receiver domain 4 114 3.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_7009 6730d2e786e57ff8bd238a48cb028289 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_7009 6730d2e786e57ff8bd238a48cb028289 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 6.9E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_7009 6730d2e786e57ff8bd238a48cb028289 218 SMART SM00421 150 207 3.8E-28 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_7009 6730d2e786e57ff8bd238a48cb028289 218 Gene3D G3DSA:3.40.50.12740 2 213 3.0E-73 T 14-10-2018 Amir_7009 6730d2e786e57ff8bd238a48cb028289 218 SUPERFAMILY SSF52172 1 133 2.85E-33 T 14-10-2018 IPR011006 CheY-like superfamily Amir_7009 6730d2e786e57ff8bd238a48cb028289 218 SUPERFAMILY SSF46894 146 214 4.08E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_1978 09ce9e84655bd0428e3252a731ff79a0 512 SUPERFAMILY SSF51445 18 357 7.6E-87 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_1978 09ce9e84655bd0428e3252a731ff79a0 512 Gene3D G3DSA:3.20.20.80 17 357 6.3E-178 T 14-10-2018 Amir_1978 09ce9e84655bd0428e3252a731ff79a0 512 Pfam PF01229 Glycosyl hydrolases family 39 18 481 9.0E-126 T 14-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Amir_1978 09ce9e84655bd0428e3252a731ff79a0 512 PRINTS PR00745 Glycosyl hydrolase family 39 signature 428 442 5.4E-30 T 14-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Amir_1978 09ce9e84655bd0428e3252a731ff79a0 512 PRINTS PR00745 Glycosyl hydrolase family 39 signature 286 303 5.4E-30 T 14-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Amir_1978 09ce9e84655bd0428e3252a731ff79a0 512 PRINTS PR00745 Glycosyl hydrolase family 39 signature 85 101 5.4E-30 T 14-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Amir_1978 09ce9e84655bd0428e3252a731ff79a0 512 PRINTS PR00745 Glycosyl hydrolase family 39 signature 213 227 5.4E-30 T 14-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Amir_1978 09ce9e84655bd0428e3252a731ff79a0 512 PRINTS PR00745 Glycosyl hydrolase family 39 signature 132 149 5.4E-30 T 14-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Amir_1978 09ce9e84655bd0428e3252a731ff79a0 512 PRINTS PR00745 Glycosyl hydrolase family 39 signature 149 165 5.4E-30 T 14-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Amir_1978 09ce9e84655bd0428e3252a731ff79a0 512 Gene3D G3DSA:2.60.40.1500 16 484 6.3E-178 T 14-10-2018 Amir_1978 09ce9e84655bd0428e3252a731ff79a0 512 SUPERFAMILY SSF51011 345 486 1.44E-24 T 14-10-2018 Amir_0273 a837bae7a68a2f76a0cc0c1c7d443176 580 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 418 568 3.0E-10 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 Amir_0273 a837bae7a68a2f76a0cc0c1c7d443176 580 Gene3D G3DSA:3.20.20.300 33 395 2.3E-127 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Amir_0273 a837bae7a68a2f76a0cc0c1c7d443176 580 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 46 382 5.7E-101 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_0273 a837bae7a68a2f76a0cc0c1c7d443176 580 Gene3D G3DSA:3.40.50.1700 406 580 8.1E-27 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Amir_0273 a837bae7a68a2f76a0cc0c1c7d443176 580 PRINTS PR00133 Glycosyl hydrolase family 3 signature 304 322 6.6E-6 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_0273 a837bae7a68a2f76a0cc0c1c7d443176 580 PRINTS PR00133 Glycosyl hydrolase family 3 signature 227 243 6.6E-6 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_0273 a837bae7a68a2f76a0cc0c1c7d443176 580 PRINTS PR00133 Glycosyl hydrolase family 3 signature 144 163 6.6E-6 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_0273 a837bae7a68a2f76a0cc0c1c7d443176 580 SUPERFAMILY SSF51445 29 416 8.95E-104 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_0273 a837bae7a68a2f76a0cc0c1c7d443176 580 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 304 321 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 Amir_0273 a837bae7a68a2f76a0cc0c1c7d443176 580 SUPERFAMILY SSF52279 450 580 1.16E-12 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Amir_7072 22e4a260d5d89f2871457c92aee07bc0 710 SUPERFAMILY SSF82866 453 671 3.4E-28 T 14-10-2018 Amir_7072 22e4a260d5d89f2871457c92aee07bc0 710 SUPERFAMILY SSF82866 125 320 2.62E-32 T 14-10-2018 Amir_7072 22e4a260d5d89f2871457c92aee07bc0 710 Pfam PF03176 MMPL family 442 672 5.4E-32 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Amir_7072 22e4a260d5d89f2871457c92aee07bc0 710 Pfam PF03176 MMPL family 77 351 5.1E-46 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Amir_7072 22e4a260d5d89f2871457c92aee07bc0 710 Gene3D G3DSA:1.20.1640.10 140 326 3.0E-10 T 14-10-2018 Amir_1675 81e641f939b65c58912a024790fde1aa 375 Pfam PF04235 Protein of unknown function (DUF418) 213 364 5.7E-30 T 14-10-2018 IPR007349 Domain of unknown function DUF418 Amir_3887 779fa44769c590800c07d590caeb0279 326 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 160 8.2E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3887 779fa44769c590800c07d590caeb0279 326 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 100 111 8.2E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3887 779fa44769c590800c07d590caeb0279 326 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 204 8.2E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3887 779fa44769c590800c07d590caeb0279 326 SUPERFAMILY SSF51735 23 281 2.42E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3887 779fa44769c590800c07d590caeb0279 326 Pfam PF00106 short chain dehydrogenase 28 227 1.6E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3887 779fa44769c590800c07d590caeb0279 326 Gene3D G3DSA:3.40.50.720 18 320 3.2E-75 T 14-10-2018 Amir_3887 779fa44769c590800c07d590caeb0279 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 223 2.3E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3887 779fa44769c590800c07d590caeb0279 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 27 44 2.3E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3887 779fa44769c590800c07d590caeb0279 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 204 2.3E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3887 779fa44769c590800c07d590caeb0279 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 2.3E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3887 779fa44769c590800c07d590caeb0279 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 100 111 2.3E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3887 779fa44769c590800c07d590caeb0279 326 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 172 200 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_1387 cac61274ebf64de8a693281152924c5c 406 SUPERFAMILY SSF52540 6 285 1.3E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1387 cac61274ebf64de8a693281152924c5c 406 Gene3D G3DSA:2.60.40.790 329 402 5.4E-15 T 14-10-2018 IPR008978 HSP20-like chaperone Amir_1387 cac61274ebf64de8a693281152924c5c 406 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 7 305 1.3E-55 T 14-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 Amir_1387 cac61274ebf64de8a693281152924c5c 406 Gene3D G3DSA:3.40.50.300 2 316 2.2E-78 T 14-10-2018 Amir_1387 cac61274ebf64de8a693281152924c5c 406 Pfam PF02374 Anion-transporting ATPase 5 309 4.9E-60 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Amir_0100 9a20497eca8615aeab6328b2b2e91f09 300 SUPERFAMILY SSF55021 177 271 2.96E-26 T 14-10-2018 Amir_0100 9a20497eca8615aeab6328b2b2e91f09 300 Gene3D G3DSA:3.40.190.10 3 90 4.6E-26 T 14-10-2018 Amir_0100 9a20497eca8615aeab6328b2b2e91f09 300 SUPERFAMILY SSF53850 7 186 4.34E-45 T 14-10-2018 Amir_0100 9a20497eca8615aeab6328b2b2e91f09 300 Pfam PF00800 Prephenate dehydratase 8 178 1.6E-45 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Amir_0100 9a20497eca8615aeab6328b2b2e91f09 300 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 219 226 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Amir_0100 9a20497eca8615aeab6328b2b2e91f09 300 Gene3D G3DSA:3.40.190.10 91 169 1.9E-21 T 14-10-2018 Amir_0100 9a20497eca8615aeab6328b2b2e91f09 300 PIRSF PIRSF001500 4 274 1.7E-56 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Amir_0100 9a20497eca8615aeab6328b2b2e91f09 300 Gene3D G3DSA:3.30.70.260 182 278 1.2E-31 T 14-10-2018 Amir_0100 9a20497eca8615aeab6328b2b2e91f09 300 Pfam PF01842 ACT domain 192 256 1.1E-10 T 14-10-2018 IPR002912 ACT domain Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 SUPERFAMILY SSF51905 3 360 3.7E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 Gene3D G3DSA:3.30.390.30 340 459 2.0E-31 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 36 46 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 Gene3D G3DSA:3.50.50.60 5 322 5.8E-92 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 319 9.4E-49 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 Gene3D G3DSA:1.10.287.990 33 102 5.8E-92 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 1.9E-26 T 14-10-2018 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 1.9E-26 T 14-10-2018 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.9E-26 T 14-10-2018 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 307 1.9E-26 T 14-10-2018 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 1.9E-26 T 14-10-2018 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 TIGRFAM TIGR03452 mycothione_red: mycothione reductase 2 454 2.7E-196 T 14-10-2018 IPR017817 Mycothione reductase MetaCyc: PWY-6421 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 Gene3D G3DSA:3.50.50.60 143 263 5.8E-92 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 SUPERFAMILY SSF55424 338 454 2.75E-29 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 PIRSF PIRSF000350 2 438 1.0E-82 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 341 450 1.6E-25 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 2.5E-43 T 14-10-2018 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 337 358 2.5E-43 T 14-10-2018 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 2.5E-43 T 14-10-2018 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 2.5E-43 T 14-10-2018 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 2.5E-43 T 14-10-2018 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 2.5E-43 T 14-10-2018 Amir_5878 f734e493c8647c13bcabd2ed9879aa98 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.5E-43 T 14-10-2018 Amir_0875 64bf158b1ec700d7c62ddca847965834 152 SUPERFAMILY SSF52788 1 147 2.49E-39 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Amir_0875 64bf158b1ec700d7c62ddca847965834 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 1.0E-18 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Amir_0875 64bf158b1ec700d7c62ddca847965834 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 1.0E-18 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Amir_0875 64bf158b1ec700d7c62ddca847965834 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 118 133 1.0E-18 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Amir_0875 64bf158b1ec700d7c62ddca847965834 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 78 93 1.0E-18 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Amir_0875 64bf158b1ec700d7c62ddca847965834 152 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 144 5.6E-36 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Amir_0875 64bf158b1ec700d7c62ddca847965834 152 SMART SM00226 2 146 2.3E-45 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Amir_0875 64bf158b1ec700d7c62ddca847965834 152 Gene3D G3DSA:3.40.50.2300 1 152 1.6E-48 T 14-10-2018 Amir_4213 5b6565e21ab8c9870c2992803236150f 551 SUPERFAMILY SSF56801 21 511 7.2E-86 T 14-10-2018 Amir_4213 5b6565e21ab8c9870c2992803236150f 551 Pfam PF00501 AMP-binding enzyme 35 438 6.0E-58 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4213 5b6565e21ab8c9870c2992803236150f 551 Gene3D G3DSA:3.30.300.30 441 517 8.0E-5 T 14-10-2018 Amir_4213 5b6565e21ab8c9870c2992803236150f 551 Gene3D G3DSA:3.40.50.12780 25 436 1.1E-81 T 14-10-2018 Amir_2951 b429b1ddef0070a93c5cbd9749d35b6b 341 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 255 1.1E-10 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_2951 b429b1ddef0070a93c5cbd9749d35b6b 341 SUPERFAMILY SSF51735 4 332 4.19E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2951 b429b1ddef0070a93c5cbd9749d35b6b 341 Gene3D G3DSA:3.40.50.720 4 334 4.0E-31 T 14-10-2018 Amir_2920 f01a190bc509ef21b252a29f315aa24a 424 Gene3D G3DSA:3.40.190.10 31 420 3.3E-86 T 14-10-2018 Amir_2920 f01a190bc509ef21b252a29f315aa24a 424 SUPERFAMILY SSF53850 26 418 1.98E-58 T 14-10-2018 Amir_2920 f01a190bc509ef21b252a29f315aa24a 424 Pfam PF01547 Bacterial extracellular solute-binding protein 47 334 5.0E-36 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_5869 eae0626501ea964038e0a6935906a222 247 Gene3D G3DSA:2.40.10.10 39 237 1.5E-71 T 14-10-2018 Amir_5869 eae0626501ea964038e0a6935906a222 247 SMART SM00020 26 241 1.5E-74 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_5869 eae0626501ea964038e0a6935906a222 247 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 196 207 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site Amir_5869 eae0626501ea964038e0a6935906a222 247 SUPERFAMILY SSF50494 5 246 1.06E-68 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_5869 eae0626501ea964038e0a6935906a222 247 Gene3D G3DSA:2.40.10.10 27 235 1.5E-71 T 14-10-2018 Amir_5869 eae0626501ea964038e0a6935906a222 247 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 64 69 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 Amir_5869 eae0626501ea964038e0a6935906a222 247 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 110 124 2.9E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_5869 eae0626501ea964038e0a6935906a222 247 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 195 207 2.9E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_5869 eae0626501ea964038e0a6935906a222 247 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 54 69 2.9E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_5869 eae0626501ea964038e0a6935906a222 247 Pfam PF00089 Trypsin 27 241 3.1E-57 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_3055 33356f9cce297117e39e744fbd74cb50 189 SUPERFAMILY SSF46689 3 65 2.0E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3055 33356f9cce297117e39e744fbd74cb50 189 Gene3D G3DSA:1.10.357.10 68 185 8.7E-28 T 14-10-2018 Amir_3055 33356f9cce297117e39e744fbd74cb50 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3055 33356f9cce297117e39e744fbd74cb50 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3055 33356f9cce297117e39e744fbd74cb50 189 SUPERFAMILY SSF48498 79 184 2.36E-24 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3055 33356f9cce297117e39e744fbd74cb50 189 Gene3D G3DSA:1.10.10.60 5 63 2.1E-20 T 14-10-2018 Amir_3055 33356f9cce297117e39e744fbd74cb50 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 3.6E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6363 0b28c67eb2421650cb396ffd3190ab0a 59 Pfam PF12728 Helix-turn-helix domain 10 55 1.5E-7 T 14-10-2018 Amir_6363 0b28c67eb2421650cb396ffd3190ab0a 59 SUPERFAMILY SSF46955 8 56 1.89E-7 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_6363 0b28c67eb2421650cb396ffd3190ab0a 59 Gene3D G3DSA:1.10.1660.10 1 56 3.3E-6 T 14-10-2018 Amir_4717 263813db4470f6f718cbeab5843496bd 332 SUPERFAMILY SSF161098 104 315 1.96E-18 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4717 263813db4470f6f718cbeab5843496bd 332 Gene3D G3DSA:1.10.3720.10 99 323 2.1E-19 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4717 263813db4470f6f718cbeab5843496bd 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 327 8.3E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_5279 147be04bc3b2ffac462157b1d84c3d3d 144 Pfam PF04341 Protein of unknown function, DUF485 62 134 5.1E-8 T 14-10-2018 IPR007436 Protein of unknown function DUF485 Amir_2050 35dd33dedff6e89e74e77bb3ada4e700 258 Gene3D G3DSA:1.10.3720.10 53 251 4.0E-29 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2050 35dd33dedff6e89e74e77bb3ada4e700 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 245 6.6E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_2050 35dd33dedff6e89e74e77bb3ada4e700 258 SUPERFAMILY SSF161098 58 244 1.83E-31 T 14-10-2018 IPR035906 MetI-like superfamily Amir_6877 53fbea2fe9180c52ffd4ab8c616756bc 223 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 205 5.2E-38 T 14-10-2018 Amir_6877 53fbea2fe9180c52ffd4ab8c616756bc 223 SMART SM01211 1 220 2.4E-123 T 14-10-2018 Amir_6877 53fbea2fe9180c52ffd4ab8c616756bc 223 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 218 38.898 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amir_6877 53fbea2fe9180c52ffd4ab8c616756bc 223 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 219 7.5E-82 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amir_6877 53fbea2fe9180c52ffd4ab8c616756bc 223 PIRSF PIRSF001586 1 223 1.5E-79 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amir_6877 53fbea2fe9180c52ffd4ab8c616756bc 223 SUPERFAMILY SSF52317 1 218 3.06E-71 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_6877 53fbea2fe9180c52ffd4ab8c616756bc 223 Gene3D G3DSA:3.40.50.880 1 221 2.1E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_0988 20acc7b8fdd24a66830741b76a8867a0 291 Pfam PF01636 Phosphotransferase enzyme family 55 206 3.4E-13 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_0988 20acc7b8fdd24a66830741b76a8867a0 291 SUPERFAMILY SSF56112 2 258 1.48E-22 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_0988 20acc7b8fdd24a66830741b76a8867a0 291 Gene3D G3DSA:1.10.510.10 137 210 2.1E-6 T 14-10-2018 Amir_1591 9f517a5dcd9b6a5850e64064354d9901 336 Gene3D G3DSA:1.10.260.150 60 331 1.8E-70 T 14-10-2018 Amir_1591 9f517a5dcd9b6a5850e64064354d9901 336 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 100 243 5.3E-39 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amir_1591 9f517a5dcd9b6a5850e64064354d9901 336 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 100 242 8.2E-44 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amir_6596 61f6bed430c34f08ace6871d0c4f4db0 61 SUPERFAMILY SSF55129 1 59 7.72E-21 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Amir_6596 61f6bed430c34f08ace6871d0c4f4db0 61 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 7.7E-18 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Amir_6596 61f6bed430c34f08ace6871d0c4f4db0 61 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site Amir_6596 61f6bed430c34f08ace6871d0c4f4db0 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.3E-23 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6596 61f6bed430c34f08ace6871d0c4f4db0 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 20.319 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6596 61f6bed430c34f08ace6871d0c4f4db0 61 PIRSF PIRSF002211 1 60 6.1E-27 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6596 61f6bed430c34f08ace6871d0c4f4db0 61 Gene3D G3DSA:3.30.1390.20 1 60 1.6E-24 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Amir_5577 6359ab78af61eac3a819c541313677ab 104 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 94 16.041 T 14-10-2018 IPR003482 Transcription factor WhiB Amir_5577 6359ab78af61eac3a819c541313677ab 104 Pfam PF02467 Transcription factor WhiB 21 89 6.4E-22 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain Amir_0673 80766a2b0a9a724e993af40fe52cf3a8 165 Pfam PF04417 Protein of unknown function (DUF501) 30 149 3.1E-39 T 14-10-2018 IPR007511 Protein of unknown function DUF501 Amir_6953 f05bad04f1ec6c05b720f0183efcf03c 758 SUPERFAMILY SSF46548 282 426 1.2E-20 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amir_6953 f05bad04f1ec6c05b720f0183efcf03c 758 Pfam PF02754 Cysteine-rich domain 480 571 5.7E-14 T 14-10-2018 IPR004017 Cysteine-rich domain Amir_6953 f05bad04f1ec6c05b720f0183efcf03c 758 Pfam PF02754 Cysteine-rich domain 610 696 8.7E-17 T 14-10-2018 IPR004017 Cysteine-rich domain Amir_6953 f05bad04f1ec6c05b720f0183efcf03c 758 Pfam PF13183 4Fe-4S dicluster domain 296 412 5.8E-14 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amir_6953 f05bad04f1ec6c05b720f0183efcf03c 758 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 398 409 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amir_0603 5677f17e531ad22d5890f7b42ea1cb3b 210 SUPERFAMILY SSF55469 1 205 9.03E-46 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_0603 5677f17e531ad22d5890f7b42ea1cb3b 210 Pfam PF00881 Nitroreductase family 9 173 1.8E-26 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amir_0603 5677f17e531ad22d5890f7b42ea1cb3b 210 Gene3D G3DSA:3.40.109.10 1 177 2.5E-42 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_0603 5677f17e531ad22d5890f7b42ea1cb3b 210 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 2 199 1.1E-66 T 14-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 Amir_6271 a42a2fab127db5b8745b5a1d8eb5c7c9 360 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_6271 a42a2fab127db5b8745b5a1d8eb5c7c9 360 SMART SM00382 27 213 8.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6271 a42a2fab127db5b8745b5a1d8eb5c7c9 360 Gene3D G3DSA:3.40.50.300 1 245 6.7E-71 T 14-10-2018 Amir_6271 a42a2fab127db5b8745b5a1d8eb5c7c9 360 Pfam PF00005 ABC transporter 19 163 5.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6271 a42a2fab127db5b8745b5a1d8eb5c7c9 360 SUPERFAMILY SSF52540 1 239 1.13E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1524 fced973d80274882dd5c47e01b529afa 633 SUPERFAMILY SSF52518 3 348 1.35E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_1524 fced973d80274882dd5c47e01b529afa 633 SMART SM00861 317 481 1.3E-53 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amir_1524 fced973d80274882dd5c47e01b529afa 633 Gene3D G3DSA:3.40.50.920 492 623 5.6E-27 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_1524 fced973d80274882dd5c47e01b529afa 633 ProSitePatterns PS00801 Transketolase signature 1. 29 48 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_1524 fced973d80274882dd5c47e01b529afa 633 Pfam PF02780 Transketolase, C-terminal domain 494 611 5.6E-26 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Amir_1524 fced973d80274882dd5c47e01b529afa 633 Pfam PF02779 Transketolase, pyrimidine binding domain 316 479 8.1E-38 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amir_1524 fced973d80274882dd5c47e01b529afa 633 ProSitePatterns PS00802 Transketolase signature 2. 423 439 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_1524 fced973d80274882dd5c47e01b529afa 633 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 4 281 6.1E-109 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_1524 fced973d80274882dd5c47e01b529afa 633 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 6 619 3.4E-183 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_1524 fced973d80274882dd5c47e01b529afa 633 SUPERFAMILY SSF52922 496 619 1.7E-24 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_1524 fced973d80274882dd5c47e01b529afa 633 SUPERFAMILY SSF52518 295 478 1.28E-51 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_1524 fced973d80274882dd5c47e01b529afa 633 Gene3D G3DSA:3.40.50.970 315 487 1.9E-57 T 14-10-2018 Amir_1524 fced973d80274882dd5c47e01b529afa 633 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 3 620 41.02 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_3504 5d2f7b6b4b20bc168891bec0c5c90689 515 SUPERFAMILY SSF51905 2 376 7.04E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3504 5d2f7b6b4b20bc168891bec0c5c90689 515 Pfam PF01494 FAD binding domain 2 344 1.3E-63 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_3504 5d2f7b6b4b20bc168891bec0c5c90689 515 Gene3D G3DSA:3.40.30.120 394 504 1.5E-26 T 14-10-2018 Amir_3504 5d2f7b6b4b20bc168891bec0c5c90689 515 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 315 333 6.3E-31 T 14-10-2018 Amir_3504 5d2f7b6b4b20bc168891bec0c5c90689 515 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 6.3E-31 T 14-10-2018 Amir_3504 5d2f7b6b4b20bc168891bec0c5c90689 515 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 6.3E-31 T 14-10-2018 Amir_3504 5d2f7b6b4b20bc168891bec0c5c90689 515 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 333 349 6.3E-31 T 14-10-2018 Amir_3504 5d2f7b6b4b20bc168891bec0c5c90689 515 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 145 160 6.3E-31 T 14-10-2018 Amir_3504 5d2f7b6b4b20bc168891bec0c5c90689 515 Gene3D G3DSA:3.50.50.60 1 198 8.5E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3504 5d2f7b6b4b20bc168891bec0c5c90689 515 Gene3D G3DSA:3.50.50.60 247 393 5.4E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0925 e1838c6016c693ea376d836e6377b206 474 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Amir_0925 e1838c6016c693ea376d836e6377b206 474 Gene3D G3DSA:3.10.20.70 4 106 4.1E-37 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_0925 e1838c6016c693ea376d836e6377b206 474 Gene3D G3DSA:3.30.590.10 107 462 4.6E-153 T 14-10-2018 Amir_0925 e1838c6016c693ea376d836e6377b206 474 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 390 402 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_0925 e1838c6016c693ea376d836e6377b206 474 Pfam PF00120 Glutamine synthetase, catalytic domain 105 471 2.2E-136 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_0925 e1838c6016c693ea376d836e6377b206 474 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 473 2.7E-206 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_0925 e1838c6016c693ea376d836e6377b206 474 SUPERFAMILY SSF55931 105 473 5.1E-139 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amir_0925 e1838c6016c693ea376d836e6377b206 474 SMART SM01230 104 383 1.2E-151 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_0925 e1838c6016c693ea376d836e6377b206 474 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 97 9.7E-25 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Amir_0925 e1838c6016c693ea376d836e6377b206 474 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Amir_0925 e1838c6016c693ea376d836e6377b206 474 SUPERFAMILY SSF54368 5 102 1.83E-31 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_2997 b8ae480c069ea60f23aef98d420da766 155 Gene3D G3DSA:1.20.120.450 9 154 2.8E-26 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_2997 b8ae480c069ea60f23aef98d420da766 155 SUPERFAMILY SSF109854 2 150 2.75E-34 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_2997 b8ae480c069ea60f23aef98d420da766 155 Pfam PF04978 Protein of unknown function (DUF664) 19 151 6.0E-35 T 14-10-2018 IPR007061 Protein of unknown function DUF664 Amir_3792 b34d806754c300d44a8e5f73398e02df 335 SUPERFAMILY SSF56112 102 315 4.99E-12 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_3792 b34d806754c300d44a8e5f73398e02df 335 Gene3D G3DSA:1.10.510.10 171 321 1.4E-10 T 14-10-2018 Amir_0531 fa7f6f3cff1129d01c9864010d7df567 429 Pfam PF07730 Histidine kinase 244 306 4.4E-10 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_0531 fa7f6f3cff1129d01c9864010d7df567 429 SUPERFAMILY SSF55874 334 427 8.77E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0531 fa7f6f3cff1129d01c9864010d7df567 429 Pfam PF13796 Putative sensor 66 217 1.4E-9 T 14-10-2018 IPR025828 Putative sensor domain Amir_0531 fa7f6f3cff1129d01c9864010d7df567 429 SMART SM00387 339 429 4.5E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0531 fa7f6f3cff1129d01c9864010d7df567 429 Gene3D G3DSA:3.30.565.10 306 428 1.4E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6189 620a5dcc98ca13879a1df25565759e24 402 Gene3D G3DSA:3.30.420.40 190 359 1.0E-50 T 14-10-2018 Amir_6189 620a5dcc98ca13879a1df25565759e24 402 Gene3D G3DSA:3.30.420.40 93 369 1.0E-50 T 14-10-2018 Amir_6189 620a5dcc98ca13879a1df25565759e24 402 Gene3D G3DSA:1.10.10.10 11 77 6.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6189 620a5dcc98ca13879a1df25565759e24 402 SUPERFAMILY SSF53067 81 375 3.39E-36 T 14-10-2018 Amir_6189 620a5dcc98ca13879a1df25565759e24 402 Pfam PF00480 ROK family 145 374 4.9E-34 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_6189 620a5dcc98ca13879a1df25565759e24 402 SUPERFAMILY SSF46785 13 73 2.08E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4590 78c327fe79d2aeca599f75fe13c059df 345 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 56 135 3.6E-8 T 14-10-2018 Amir_4590 78c327fe79d2aeca599f75fe13c059df 345 SUPERFAMILY SSF54593 12 333 1.0E-72 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_4590 78c327fe79d2aeca599f75fe13c059df 345 PIRSF PIRSF009283 1 345 2.9E-111 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 Amir_4590 78c327fe79d2aeca599f75fe13c059df 345 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 154 267 2.2E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amir_4590 78c327fe79d2aeca599f75fe13c059df 345 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 13 344 4.0E-103 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 Amir_4590 78c327fe79d2aeca599f75fe13c059df 345 Gene3D G3DSA:3.10.180.10 149 345 1.9E-63 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_4590 78c327fe79d2aeca599f75fe13c059df 345 Gene3D G3DSA:3.10.180.10 8 145 9.3E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_0195 4d1ea7f512f64288944b5546f5c1ee09 821 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 497 788 1.3E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Amir_0195 4d1ea7f512f64288944b5546f5c1ee09 821 SUPERFAMILY SSF56219 494 795 3.36E-31 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Amir_0195 4d1ea7f512f64288944b5546f5c1ee09 821 Pfam PF00932 Lamin Tail Domain 28 134 3.1E-8 T 14-10-2018 IPR001322 Lamin tail domain Amir_0195 4d1ea7f512f64288944b5546f5c1ee09 821 Gene3D G3DSA:3.60.10.10 494 796 1.9E-34 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Amir_5729 be493fb0f58b957543854530ac6aed7e 538 SUPERFAMILY SSF56425 234 351 9.87E-31 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_5729 be493fb0f58b957543854530ac6aed7e 538 Gene3D G3DSA:3.90.700.10 243 346 2.2E-132 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_5729 be493fb0f58b957543854530ac6aed7e 538 Gene3D G3DSA:1.20.58.100 420 521 8.2E-10 T 14-10-2018 Amir_5729 be493fb0f58b957543854530ac6aed7e 538 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 1.2E-7 T 14-10-2018 Amir_5729 be493fb0f58b957543854530ac6aed7e 538 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 369 376 1.2E-7 T 14-10-2018 Amir_5729 be493fb0f58b957543854530ac6aed7e 538 Pfam PF02910 Fumarate reductase flavoprotein C-term 432 522 1.1E-8 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_5729 be493fb0f58b957543854530ac6aed7e 538 Pfam PF00890 FAD binding domain 11 391 1.4E-83 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_5729 be493fb0f58b957543854530ac6aed7e 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 354 376 3.3E-10 T 14-10-2018 Amir_5729 be493fb0f58b957543854530ac6aed7e 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 3.3E-10 T 14-10-2018 Amir_5729 be493fb0f58b957543854530ac6aed7e 538 SUPERFAMILY SSF51905 5 407 4.6E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5729 be493fb0f58b957543854530ac6aed7e 538 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 10 504 3.5E-151 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 Amir_5729 be493fb0f58b957543854530ac6aed7e 538 SUPERFAMILY SSF46977 429 525 7.85E-20 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_5729 be493fb0f58b957543854530ac6aed7e 538 Gene3D G3DSA:3.50.50.60 11 402 2.2E-132 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0862 ce10f5e4f8aa68fd43352ba76c7312e1 291 Gene3D G3DSA:3.40.50.1820 1 287 7.4E-60 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0862 ce10f5e4f8aa68fd43352ba76c7312e1 291 PRINTS PR00412 Epoxide hydrolase signature 35 53 5.7E-8 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_0862 ce10f5e4f8aa68fd43352ba76c7312e1 291 PRINTS PR00412 Epoxide hydrolase signature 230 246 5.7E-8 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_0862 ce10f5e4f8aa68fd43352ba76c7312e1 291 PRINTS PR00412 Epoxide hydrolase signature 101 114 5.7E-8 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_0862 ce10f5e4f8aa68fd43352ba76c7312e1 291 PRINTS PR00412 Epoxide hydrolase signature 262 284 5.7E-8 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_0862 ce10f5e4f8aa68fd43352ba76c7312e1 291 SUPERFAMILY SSF53474 5 287 3.94E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0862 ce10f5e4f8aa68fd43352ba76c7312e1 291 Pfam PF00561 alpha/beta hydrolase fold 29 271 3.5E-26 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_1803 e2c869656147fec55345e982c5fc1953 392 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 140 6.8E-28 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_1803 e2c869656147fec55345e982c5fc1953 392 Gene3D G3DSA:3.90.180.10 4 379 1.0E-121 T 14-10-2018 Amir_1803 e2c869656147fec55345e982c5fc1953 392 Pfam PF00107 Zinc-binding dehydrogenase 189 257 3.0E-11 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_1803 e2c869656147fec55345e982c5fc1953 392 SMART SM00829 8 310 0.0063 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_1803 e2c869656147fec55345e982c5fc1953 392 SUPERFAMILY SSF51735 156 351 2.04E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1803 e2c869656147fec55345e982c5fc1953 392 Pfam PF13823 Alcohol dehydrogenase GroES-associated 2 23 1.5E-11 T 14-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated Amir_1803 e2c869656147fec55345e982c5fc1953 392 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amir_1803 e2c869656147fec55345e982c5fc1953 392 SUPERFAMILY SSF50129 2 175 3.5E-56 T 14-10-2018 IPR011032 GroES-like superfamily Amir_1803 e2c869656147fec55345e982c5fc1953 392 Gene3D G3DSA:3.40.50.720 169 351 1.0E-121 T 14-10-2018 Amir_0978 2ce1cb2e0dc1651ca92950c9bde06c16 189 Gene3D G3DSA:3.90.79.10 7 184 2.4E-40 T 14-10-2018 Amir_0978 2ce1cb2e0dc1651ca92950c9bde06c16 189 SUPERFAMILY SSF55811 9 181 5.55E-32 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_0978 2ce1cb2e0dc1651ca92950c9bde06c16 189 Pfam PF00293 NUDIX domain 47 157 8.0E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_2324 aacb5beebb99b1d5bd2f96ded9be7402 144 SMART SM00260 1 138 7.1E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Amir_2324 aacb5beebb99b1d5bd2f96ded9be7402 144 SUPERFAMILY SSF50341 2 136 5.62E-32 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Amir_2324 aacb5beebb99b1d5bd2f96ded9be7402 144 Pfam PF01584 CheW-like domain 5 139 8.5E-28 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Amir_2324 aacb5beebb99b1d5bd2f96ded9be7402 144 Gene3D G3DSA:2.40.50.180 24 133 2.8E-31 T 14-10-2018 Amir_2324 aacb5beebb99b1d5bd2f96ded9be7402 144 Gene3D G3DSA:2.30.30.40 8 132 2.8E-31 T 14-10-2018 Amir_6758 a6eb45ed141b7f3fc60f04a470ba6baf 381 Gene3D G3DSA:2.60.40.3710 139 380 3.1E-86 T 14-10-2018 Amir_6758 a6eb45ed141b7f3fc60f04a470ba6baf 381 SUPERFAMILY SSF141523 230 352 2.49E-26 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Amir_6758 a6eb45ed141b7f3fc60f04a470ba6baf 381 Gene3D G3DSA:2.60.40.3780 34 129 1.9E-29 T 14-10-2018 Amir_6758 a6eb45ed141b7f3fc60f04a470ba6baf 381 Gene3D G3DSA:2.40.440.10 233 368 3.1E-86 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Amir_6758 a6eb45ed141b7f3fc60f04a470ba6baf 381 Pfam PF03734 L,D-transpeptidase catalytic domain 232 352 1.4E-18 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Amir_5805 b04be96d75c374c8079295d7b200668b 268 SUPERFAMILY SSF69593 39 232 1.83E-26 T 14-10-2018 Amir_5805 b04be96d75c374c8079295d7b200668b 268 SMART SM00563 43 162 4.3E-27 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_5805 b04be96d75c374c8079295d7b200668b 268 Pfam PF01553 Acyltransferase 40 158 7.5E-16 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_6008 3d4cc89598e57d948ed3689b360c119a 227 SUPERFAMILY SSF56784 1 218 2.34E-41 T 14-10-2018 IPR036412 HAD-like superfamily Amir_6008 3d4cc89598e57d948ed3689b360c119a 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 3 190 9.8E-21 T 14-10-2018 Amir_6008 3d4cc89598e57d948ed3689b360c119a 227 Gene3D G3DSA:1.10.150.240 11 91 1.0E-43 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Amir_6008 3d4cc89598e57d948ed3689b360c119a 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 5.5E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_6008 3d4cc89598e57d948ed3689b360c119a 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 180 193 5.5E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_6008 3d4cc89598e57d948ed3689b360c119a 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 103 116 5.5E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_6008 3d4cc89598e57d948ed3689b360c119a 227 Gene3D G3DSA:3.40.50.1000 1 214 1.0E-43 T 14-10-2018 IPR023214 HAD superfamily Amir_6008 3d4cc89598e57d948ed3689b360c119a 227 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 185 2.6E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_3581 504a8deb1d72c7399a084f790a38b0b7 488 Pfam PF13193 AMP-binding enzyme C-terminal domain 403 477 4.4E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_3581 504a8deb1d72c7399a084f790a38b0b7 488 Gene3D G3DSA:3.30.300.30 389 488 3.6E-27 T 14-10-2018 Amir_3581 504a8deb1d72c7399a084f790a38b0b7 488 Pfam PF00501 AMP-binding enzyme 5 395 2.2E-75 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3581 504a8deb1d72c7399a084f790a38b0b7 488 SUPERFAMILY SSF56801 7 485 1.16E-120 T 14-10-2018 Amir_3581 504a8deb1d72c7399a084f790a38b0b7 488 Gene3D G3DSA:3.40.50.12780 3 387 1.4E-104 T 14-10-2018 Amir_3581 504a8deb1d72c7399a084f790a38b0b7 488 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 20 419 1.8E-106 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_1765 9b1c8607ea14dd1226c11cac3f870897 251 Gene3D G3DSA:3.90.226.10 1 193 6.7E-67 T 14-10-2018 Amir_1765 9b1c8607ea14dd1226c11cac3f870897 251 SUPERFAMILY SSF52096 3 251 2.11E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_1765 9b1c8607ea14dd1226c11cac3f870897 251 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Amir_1765 9b1c8607ea14dd1226c11cac3f870897 251 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 251 6.5E-47 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Amir_1765 9b1c8607ea14dd1226c11cac3f870897 251 Gene3D G3DSA:1.10.12.10 198 251 4.6E-15 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Amir_0083 03188b7dfd0ab6e4e17dbb4359887696 415 PRINTS PR01466 Bacterial arginine deiminase signature 17 37 2.1E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amir_0083 03188b7dfd0ab6e4e17dbb4359887696 415 PRINTS PR01466 Bacterial arginine deiminase signature 193 208 2.1E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amir_0083 03188b7dfd0ab6e4e17dbb4359887696 415 PRINTS PR01466 Bacterial arginine deiminase signature 370 384 2.1E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amir_0083 03188b7dfd0ab6e4e17dbb4359887696 415 PRINTS PR01466 Bacterial arginine deiminase signature 350 367 2.1E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amir_0083 03188b7dfd0ab6e4e17dbb4359887696 415 PRINTS PR01466 Bacterial arginine deiminase signature 165 183 2.1E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amir_0083 03188b7dfd0ab6e4e17dbb4359887696 415 PRINTS PR01466 Bacterial arginine deiminase signature 393 411 2.1E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amir_0083 03188b7dfd0ab6e4e17dbb4359887696 415 Gene3D G3DSA:3.75.10.10 21 411 2.6E-137 T 14-10-2018 Amir_0083 03188b7dfd0ab6e4e17dbb4359887696 415 PIRSF PIRSF006356 16 414 4.7E-130 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amir_0083 03188b7dfd0ab6e4e17dbb4359887696 415 SUPERFAMILY SSF55909 20 414 7.66E-113 T 14-10-2018 Amir_0083 03188b7dfd0ab6e4e17dbb4359887696 415 Gene3D G3DSA:1.10.3930.10 83 164 2.6E-137 T 14-10-2018 Amir_0083 03188b7dfd0ab6e4e17dbb4359887696 415 Hamap MF_00242 Arginine deiminase [arcA]. 16 414 40.929 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amir_0083 03188b7dfd0ab6e4e17dbb4359887696 415 Pfam PF02274 Amidinotransferase 33 410 1.4E-96 T 14-10-2018 Amir_5899 3be19728288ecda4bf3232f4cad89a87 85 ProDom PD069408 TRANSMEMBRANE MEMBRANE RV2876/MT2944.1 CGL2017/CG2211 ML1584 POSSIBLE P20 13 81 8.0E-10 T 14-10-2018 IPR024341 Protein of unknown function DUF2631 Amir_5899 3be19728288ecda4bf3232f4cad89a87 85 Pfam PF10939 Protein of unknown function (DUF2631) 4 65 1.4E-25 T 14-10-2018 IPR024341 Protein of unknown function DUF2631 Amir_4799 859fb605057d861f6d093966715efd48 477 Gene3D G3DSA:3.50.50.60 5 337 2.5E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4799 859fb605057d861f6d093966715efd48 477 Gene3D G3DSA:3.40.30.120 374 477 4.2E-14 T 14-10-2018 Amir_4799 859fb605057d861f6d093966715efd48 477 Pfam PF01494 FAD binding domain 2 334 2.6E-77 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_4799 859fb605057d861f6d093966715efd48 477 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 321 7.8E-35 T 14-10-2018 Amir_4799 859fb605057d861f6d093966715efd48 477 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 270 285 7.8E-35 T 14-10-2018 Amir_4799 859fb605057d861f6d093966715efd48 477 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 7.8E-35 T 14-10-2018 Amir_4799 859fb605057d861f6d093966715efd48 477 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 301 7.8E-35 T 14-10-2018 Amir_4799 859fb605057d861f6d093966715efd48 477 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 7.8E-35 T 14-10-2018 Amir_4799 859fb605057d861f6d093966715efd48 477 SUPERFAMILY SSF51905 2 350 3.89E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4799 859fb605057d861f6d093966715efd48 477 SUPERFAMILY SSF52833 379 475 3.35E-6 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_4799 859fb605057d861f6d093966715efd48 477 Gene3D G3DSA:3.30.70.2450 176 259 2.5E-95 T 14-10-2018 Amir_1418 b4d8f296a93679aa07854da0a251b7af 64 Pfam PF11248 Protein of unknown function (DUF3046) 1 62 1.8E-27 T 14-10-2018 IPR021408 Protein of unknown function DUF3046 Amir_1212 793fed860fcfd02ebe71ed3f7e78d819 117 Gene3D G3DSA:3.40.630.30 10 109 6.7E-12 T 14-10-2018 Amir_1212 793fed860fcfd02ebe71ed3f7e78d819 117 SUPERFAMILY SSF55729 12 104 3.92E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_2646 7221fe79ba1f5f7738285c000e587793 453 Pfam PF07690 Major Facilitator Superfamily 31 401 6.8E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2646 7221fe79ba1f5f7738285c000e587793 453 SUPERFAMILY SSF103473 16 440 5.36E-77 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2646 7221fe79ba1f5f7738285c000e587793 453 Gene3D G3DSA:1.20.1250.20 13 443 5.5E-72 T 14-10-2018 Amir_3025 36250b5657639415e44d8f0dab90c53a 619 Gene3D G3DSA:3.40.50.300 395 617 2.4E-29 T 14-10-2018 Amir_3025 36250b5657639415e44d8f0dab90c53a 619 SUPERFAMILY SSF52540 400 582 4.24E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3025 36250b5657639415e44d8f0dab90c53a 619 Pfam PF00005 ABC transporter 449 536 3.5E-7 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3025 36250b5657639415e44d8f0dab90c53a 619 Pfam PF00664 ABC transporter transmembrane region 85 348 1.7E-18 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_3025 36250b5657639415e44d8f0dab90c53a 619 ProSitePatterns PS00211 ABC transporters family signature. 510 524 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3025 36250b5657639415e44d8f0dab90c53a 619 SUPERFAMILY SSF90123 72 381 1.57E-42 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_3025 36250b5657639415e44d8f0dab90c53a 619 Gene3D G3DSA:1.20.1560.10 63 383 4.1E-37 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_0429 abbcb3212f741bd1ed4a26fbd7190762 220 Gene3D G3DSA:3.30.70.2390 120 209 2.4E-32 T 14-10-2018 Amir_0429 abbcb3212f741bd1ed4a26fbd7190762 220 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 123 211 8.9E-14 T 14-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain Amir_5710 bb1a8250efe111554f56fcd7fb99c5c0 122 Gene3D G3DSA:2.30.110.10 1 122 2.0E-12 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_5710 bb1a8250efe111554f56fcd7fb99c5c0 122 TIGRFAM TIGR03666 Rv2061_F420: PPOX class probable F420-dependent enzyme, Rv2061 family 2 121 5.1E-42 T 14-10-2018 IPR019965 PPOX class F420-dependent enzyme, family Rv2061, putative Amir_5710 bb1a8250efe111554f56fcd7fb99c5c0 122 SUPERFAMILY SSF50475 3 99 6.68E-13 T 14-10-2018 Amir_1860 686150b800b5ecfb8606b8c179c6bd37 338 Gene3D G3DSA:3.40.50.2300 166 328 5.0E-70 T 14-10-2018 Amir_1860 686150b800b5ecfb8606b8c179c6bd37 338 SMART SM00354 8 78 2.0E-31 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1860 686150b800b5ecfb8606b8c179c6bd37 338 Gene3D G3DSA:1.10.260.40 1 65 1.1E-25 T 14-10-2018 Amir_1860 686150b800b5ecfb8606b8c179c6bd37 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 14-10-2018 Amir_1860 686150b800b5ecfb8606b8c179c6bd37 338 SUPERFAMILY SSF53822 68 336 1.59E-56 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_1860 686150b800b5ecfb8606b8c179c6bd37 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 55 2.1E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1860 686150b800b5ecfb8606b8c179c6bd37 338 Gene3D G3DSA:3.40.50.2300 85 324 5.0E-70 T 14-10-2018 Amir_1860 686150b800b5ecfb8606b8c179c6bd37 338 Pfam PF13377 Periplasmic binding protein-like domain 175 333 8.0E-37 T 14-10-2018 Amir_1860 686150b800b5ecfb8606b8c179c6bd37 338 SUPERFAMILY SSF47413 9 66 8.11E-20 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3018 da41f6a90b80589f2a0de82de8c8e91f 276 SUPERFAMILY SSF54506 1 274 8.64E-64 T 14-10-2018 Amir_3018 da41f6a90b80589f2a0de82de8c8e91f 276 Gene3D G3DSA:3.10.310.10 7 269 1.0E-66 T 14-10-2018 Amir_3018 da41f6a90b80589f2a0de82de8c8e91f 276 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 139 5.8E-33 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Amir_3018 da41f6a90b80589f2a0de82de8c8e91f 276 Gene3D G3DSA:3.10.310.10 122 267 1.0E-66 T 14-10-2018 Amir_3018 da41f6a90b80589f2a0de82de8c8e91f 276 PIRSF PIRSF016184 1 275 3.1E-58 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Amir_3018 da41f6a90b80589f2a0de82de8c8e91f 276 Pfam PF02567 Phenazine biosynthesis-like protein 8 271 4.8E-42 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Amir_4259 40cd587c65346198af397c83035d4882 406 Pfam PF01761 3-dehydroquinate synthase 87 335 1.2E-57 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Amir_4259 40cd587c65346198af397c83035d4882 406 Gene3D G3DSA:3.40.50.1970 16 187 3.0E-46 T 14-10-2018 Amir_4259 40cd587c65346198af397c83035d4882 406 SUPERFAMILY SSF56796 24 379 8.64E-77 T 14-10-2018 Amir_4259 40cd587c65346198af397c83035d4882 406 Gene3D G3DSA:1.20.1090.10 188 384 4.9E-50 T 14-10-2018 Amir_6389 b6f4329bcc63811ad7ed36488260c9f9 253 SUPERFAMILY SSF50037 205 249 1.92E-6 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal Amir_6389 b6f4329bcc63811ad7ed36488260c9f9 253 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 14 249 5.8E-45 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_6389 b6f4329bcc63811ad7ed36488260c9f9 253 SUPERFAMILY SSF55681 14 186 1.49E-44 T 14-10-2018 Amir_6389 b6f4329bcc63811ad7ed36488260c9f9 253 Gene3D G3DSA:3.30.930.10 1 203 1.7E-56 T 14-10-2018 Amir_6389 b6f4329bcc63811ad7ed36488260c9f9 253 Pfam PF02237 Biotin protein ligase C terminal domain 203 249 9.8E-5 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amir_6389 b6f4329bcc63811ad7ed36488260c9f9 253 Pfam PF03099 Biotin/lipoate A/B protein ligase family 25 134 9.8E-13 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Amir_6389 b6f4329bcc63811ad7ed36488260c9f9 253 Gene3D G3DSA:2.30.30.100 204 251 6.6E-14 T 14-10-2018 Amir_4291 62c045169242a54f73d95ef10e01a918 166 Pfam PF11706 CGNR zinc finger 121 164 2.0E-20 T 14-10-2018 IPR021005 Zinc finger, CGNR Amir_4291 62c045169242a54f73d95ef10e01a918 166 SUPERFAMILY SSF160904 2 163 3.01E-36 T 14-10-2018 Amir_4291 62c045169242a54f73d95ef10e01a918 166 Gene3D G3DSA:1.10.3300.10 1 165 1.6E-23 T 14-10-2018 IPR023286 ABATE domain superfamily Amir_4291 62c045169242a54f73d95ef10e01a918 166 Pfam PF07336 Putative stress-induced transcription regulator 2 123 3.4E-11 T 14-10-2018 IPR010852 Putative stress-induced transcription regulator Amir_5066 9a11629962f21eaad6a913cfc8f054b3 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 201 219 3.0E-5 T 14-10-2018 Amir_5066 9a11629962f21eaad6a913cfc8f054b3 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 3.0E-5 T 14-10-2018 Amir_5066 9a11629962f21eaad6a913cfc8f054b3 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.0E-5 T 14-10-2018 Amir_5066 9a11629962f21eaad6a913cfc8f054b3 442 SUPERFAMILY SSF51905 147 423 3.04E-12 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5066 9a11629962f21eaad6a913cfc8f054b3 442 Gene3D G3DSA:3.50.50.60 2 432 7.7E-146 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5066 9a11629962f21eaad6a913cfc8f054b3 442 SUPERFAMILY SSF51905 7 237 2.02E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5066 9a11629962f21eaad6a913cfc8f054b3 442 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 6 348 3.8E-113 T 14-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase Amir_6895 9a1947021afd68f65b8c3282c83e00a5 195 Pfam PF13419 Haloacid dehalogenase-like hydrolase 79 175 1.1E-9 T 14-10-2018 Amir_6895 9a1947021afd68f65b8c3282c83e00a5 195 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 111 176 5.2E-16 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_6895 9a1947021afd68f65b8c3282c83e00a5 195 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 93 106 5.9E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_6895 9a1947021afd68f65b8c3282c83e00a5 195 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 123 139 5.9E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_6895 9a1947021afd68f65b8c3282c83e00a5 195 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 141 161 5.9E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_6895 9a1947021afd68f65b8c3282c83e00a5 195 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 7 5.9E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_6895 9a1947021afd68f65b8c3282c83e00a5 195 SUPERFAMILY SSF56784 2 189 1.84E-29 T 14-10-2018 IPR036412 HAD-like superfamily Amir_6895 9a1947021afd68f65b8c3282c83e00a5 195 Gene3D G3DSA:3.40.50.1000 1 192 5.7E-29 T 14-10-2018 IPR023214 HAD superfamily Amir_5090 16dac6c394f5f5fdf6589eb13197fc00 487 Gene3D G3DSA:3.60.40.10 235 485 6.0E-55 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_5090 16dac6c394f5f5fdf6589eb13197fc00 487 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 293 484 9.8E-40 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_5090 16dac6c394f5f5fdf6589eb13197fc00 487 SMART SM00331 263 485 5.6E-39 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_5090 16dac6c394f5f5fdf6589eb13197fc00 487 SUPERFAMILY SSF81606 280 484 3.53E-11 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_5335 8e2d9067027f6992d26562b0e011da80 185 Gene3D G3DSA:3.40.50.1820 13 184 4.5E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5335 8e2d9067027f6992d26562b0e011da80 185 SUPERFAMILY SSF53474 14 181 4.77E-17 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6076 1866128e16c221be86e8a305379e80f1 461 Pfam PF04228 Putative neutral zinc metallopeptidase 53 252 1.4E-11 T 14-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative Amir_6076 1866128e16c221be86e8a305379e80f1 461 SUPERFAMILY SSF55486 113 243 9.21E-7 T 14-10-2018 Amir_2580 cda3d77144878aa82032e694e6889188 1291 Gene3D G3DSA:1.20.1260.20 98 179 9.3E-6 T 14-10-2018 IPR038332 PPE superfamily Amir_2580 cda3d77144878aa82032e694e6889188 1291 SUPERFAMILY SSF140459 108 225 1.39E-6 T 14-10-2018 Amir_2384 6ec0e219dd4909496339531750598e0a 441 Gene3D G3DSA:1.20.1250.20 47 433 5.5E-31 T 14-10-2018 Amir_2384 6ec0e219dd4909496339531750598e0a 441 Pfam PF05977 Transmembrane secretion effector 37 432 4.8E-31 T 14-10-2018 IPR010290 Transmembrane secretion effector Amir_2384 6ec0e219dd4909496339531750598e0a 441 SUPERFAMILY SSF103473 42 431 2.35E-37 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2384 6ec0e219dd4909496339531750598e0a 441 PRINTS PR01988 Putative bacilysin exporter bacE signature 338 361 4.1E-5 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amir_2384 6ec0e219dd4909496339531750598e0a 441 PRINTS PR01988 Putative bacilysin exporter bacE signature 401 424 4.1E-5 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amir_2384 6ec0e219dd4909496339531750598e0a 441 PRINTS PR01988 Putative bacilysin exporter bacE signature 297 314 4.1E-5 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amir_2384 6ec0e219dd4909496339531750598e0a 441 PRINTS PR01988 Putative bacilysin exporter bacE signature 177 198 4.1E-5 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amir_5831 2f8fa7452ac57047d1e64e6461ba9310 336 Pfam PF02272 DHHA1 domain 233 321 7.9E-12 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Amir_5831 2f8fa7452ac57047d1e64e6461ba9310 336 Gene3D G3DSA:3.90.1640.10 4 200 1.4E-44 T 14-10-2018 Amir_5831 2f8fa7452ac57047d1e64e6461ba9310 336 Gene3D G3DSA:3.10.310.30 201 322 7.8E-35 T 14-10-2018 Amir_5831 2f8fa7452ac57047d1e64e6461ba9310 336 SUPERFAMILY SSF64182 21 321 2.22E-51 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily Amir_5831 2f8fa7452ac57047d1e64e6461ba9310 336 Pfam PF01368 DHH family 21 162 3.9E-11 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amir_1301 2bf8f299c8495a5b449a5d550b243942 637 SUPERFAMILY SSF53448 261 531 6.75E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_1301 2bf8f299c8495a5b449a5d550b243942 637 Pfam PF13641 Glycosyltransferase like family 2 275 496 2.1E-38 T 14-10-2018 Amir_1301 2bf8f299c8495a5b449a5d550b243942 637 SUPERFAMILY SSF88713 8 189 2.13E-19 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Amir_1301 2bf8f299c8495a5b449a5d550b243942 637 Gene3D G3DSA:3.20.20.370 35 140 7.4E-17 T 14-10-2018 Amir_1301 2bf8f299c8495a5b449a5d550b243942 637 Pfam PF01522 Polysaccharide deacetylase 46 109 2.4E-11 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Amir_1301 2bf8f299c8495a5b449a5d550b243942 637 Gene3D G3DSA:3.90.550.10 270 485 1.0E-46 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_5351 ecd6578150bd4863fb880bcd8d6d6ef9 401 SUPERFAMILY SSF103473 13 391 8.11E-35 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_5351 ecd6578150bd4863fb880bcd8d6d6ef9 401 Gene3D G3DSA:1.20.1250.20 6 181 4.5E-11 T 14-10-2018 Amir_5351 ecd6578150bd4863fb880bcd8d6d6ef9 401 Pfam PF05977 Transmembrane secretion effector 27 381 3.7E-19 T 14-10-2018 IPR010290 Transmembrane secretion effector Amir_5351 ecd6578150bd4863fb880bcd8d6d6ef9 401 Gene3D G3DSA:1.20.1250.20 202 392 1.2E-13 T 14-10-2018 Amir_3990 dc558e3b2c3e1fd1bf68c42a6f49c145 248 SMART SM00422 3 72 8.2E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3990 dc558e3b2c3e1fd1bf68c42a6f49c145 248 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 5.8E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3990 dc558e3b2c3e1fd1bf68c42a6f49c145 248 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 5.8E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3990 dc558e3b2c3e1fd1bf68c42a6f49c145 248 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 5.8E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3990 dc558e3b2c3e1fd1bf68c42a6f49c145 248 Pfam PF13411 MerR HTH family regulatory protein 5 68 1.4E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3990 dc558e3b2c3e1fd1bf68c42a6f49c145 248 SUPERFAMILY SSF46955 4 106 8.42E-21 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_3990 dc558e3b2c3e1fd1bf68c42a6f49c145 248 Gene3D G3DSA:1.10.1660.10 6 238 1.9E-23 T 14-10-2018 Amir_2663 c6616ca1f0672ffa546ce9ff7e1c48f3 413 Gene3D G3DSA:3.30.470.20 99 413 7.1E-68 T 14-10-2018 Amir_2663 c6616ca1f0672ffa546ce9ff7e1c48f3 413 SUPERFAMILY SSF56059 85 333 8.49E-36 T 14-10-2018 Amir_2663 c6616ca1f0672ffa546ce9ff7e1c48f3 413 Pfam PF13535 ATP-grasp domain 141 294 9.6E-19 T 14-10-2018 Amir_2663 c6616ca1f0672ffa546ce9ff7e1c48f3 413 Gene3D G3DSA:3.40.50.20 19 96 4.8E-5 T 14-10-2018 Amir_2318 8e3f7932286e6f9bbf5a352f12e9ada5 161 Gene3D G3DSA:3.40.1550.10 11 148 1.7E-14 T 14-10-2018 IPR028976 CheC-like superfamily Amir_2318 8e3f7932286e6f9bbf5a352f12e9ada5 161 Pfam PF13690 Chemotaxis phosphatase CheX 44 117 3.6E-16 T 14-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain Amir_2318 8e3f7932286e6f9bbf5a352f12e9ada5 161 SUPERFAMILY SSF103039 41 116 1.7E-14 T 14-10-2018 IPR028976 CheC-like superfamily Amir_5767 f6ab08f3d6d2a4486fa045f47f1e051f 425 Gene3D G3DSA:3.50.50.60 3 80 3.8E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5767 f6ab08f3d6d2a4486fa045f47f1e051f 425 SUPERFAMILY SSF51905 6 417 1.0E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5767 f6ab08f3d6d2a4486fa045f47f1e051f 425 Gene3D G3DSA:3.50.50.60 138 345 1.7E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_7099 a9d1fd25ad54f0e4fd09e46aa953e00e 81 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 11 78 2.9E-11 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Amir_7099 a9d1fd25ad54f0e4fd09e46aa953e00e 81 SUPERFAMILY SSF54211 11 80 1.57E-15 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_7099 a9d1fd25ad54f0e4fd09e46aa953e00e 81 Pfam PF00825 Ribonuclease P 11 79 1.6E-18 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Amir_7099 a9d1fd25ad54f0e4fd09e46aa953e00e 81 Gene3D G3DSA:3.30.230.10 1 81 8.7E-16 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amir_5874 6ff9da1a077b533f8a2cbe3effa63e05 266 PIRSF PIRSF017393 1 266 1.7E-96 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type Amir_5874 6ff9da1a077b533f8a2cbe3effa63e05 266 Gene3D G3DSA:3.40.50.150 1 265 8.9E-105 T 14-10-2018 Amir_5874 6ff9da1a077b533f8a2cbe3effa63e05 266 SUPERFAMILY SSF53335 9 250 9.41E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_5874 6ff9da1a077b533f8a2cbe3effa63e05 266 Pfam PF04672 S-adenosyl methyltransferase 6 264 5.4E-90 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type Amir_2651 7762adf1fe24c0f89ee9e5a9741bb02f 284 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 3 125 1.5E-8 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Amir_2651 7762adf1fe24c0f89ee9e5a9741bb02f 284 Gene3D G3DSA:1.10.3640.10 177 278 4.5E-33 T 14-10-2018 IPR037161 Semialdehyde dehydrogenase-like, C-terminal Amir_2651 7762adf1fe24c0f89ee9e5a9741bb02f 284 Gene3D G3DSA:3.40.50.720 1 176 2.4E-55 T 14-10-2018 Amir_2651 7762adf1fe24c0f89ee9e5a9741bb02f 284 SUPERFAMILY SSF51735 5 166 3.52E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2651 7762adf1fe24c0f89ee9e5a9741bb02f 284 Pfam PF16896 Phosphogluconate dehydrogenase (decarboxylating) C-term 124 277 5.1E-63 T 14-10-2018 IPR031663 Phosphogluconate dehydrogenase (decarboxylating) , C-terminal Amir_1885 217c02db8bd615448e699f59e951c0fe 368 Pfam PF05762 VWA domain containing CoxE-like protein 143 361 4.1E-56 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like Amir_1885 217c02db8bd615448e699f59e951c0fe 368 SUPERFAMILY SSF53300 205 350 7.42E-21 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_1885 217c02db8bd615448e699f59e951c0fe 368 SMART SM00327 205 364 1.4E-9 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_1885 217c02db8bd615448e699f59e951c0fe 368 Gene3D G3DSA:3.40.50.410 204 366 8.5E-14 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_4098 7d2181e8a7e2fa157a3a0cc576128142 211 Gene3D G3DSA:1.20.1290.10 19 184 3.1E-31 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amir_4098 7d2181e8a7e2fa157a3a0cc576128142 211 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 65 107 3.8E-8 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Amir_4098 7d2181e8a7e2fa157a3a0cc576128142 211 Pfam PF02627 Carboxymuconolactone decarboxylase family 48 109 4.5E-7 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Amir_4098 7d2181e8a7e2fa157a3a0cc576128142 211 SUPERFAMILY SSF69118 7 181 1.44E-39 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amir_1783 24d8d2896959c7174421e4d63a3c66d5 345 Gene3D G3DSA:3.90.480.10 26 89 1.1E-12 T 14-10-2018 Amir_1783 24d8d2896959c7174421e4d63a3c66d5 345 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 26 71 3.3E-7 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_1783 24d8d2896959c7174421e4d63a3c66d5 345 Gene3D G3DSA:3.30.413.10 90 138 1.1E-12 T 14-10-2018 Amir_1783 24d8d2896959c7174421e4d63a3c66d5 345 SUPERFAMILY SSF55124 164 264 4.67E-7 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_1783 24d8d2896959c7174421e4d63a3c66d5 345 SUPERFAMILY SSF55124 5 87 7.69E-15 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amir_6673 498cf51b603a5c537eb407cb3b7ea0dc 277 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 37 185 2.2E-34 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6673 498cf51b603a5c537eb407cb3b7ea0dc 277 Gene3D G3DSA:1.20.120.1200 26 188 1.8E-43 T 14-10-2018 Amir_5940 388d1f3d9d4a9df4e46da3ebf768dbb0 151 Pfam PF14430 Immunity protein Imm1 19 133 6.0E-21 T 14-10-2018 IPR025680 Immunity protein Imm1 Amir_3493 680e6bd2a0b537659a1bad7173ac198d 133 SUPERFAMILY SSF55298 13 132 3.3E-22 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_3493 680e6bd2a0b537659a1bad7173ac198d 133 Gene3D G3DSA:3.30.1330.40 2 133 1.5E-23 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_3493 680e6bd2a0b537659a1bad7173ac198d 133 Pfam PF01042 Endoribonuclease L-PSP 28 132 2.3E-14 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Amir_1712 2517ed7bec45c14d1d2914012bebe763 531 Pfam PF01039 Carboxyl transferase domain 48 519 4.2E-130 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Amir_1712 2517ed7bec45c14d1d2914012bebe763 531 Gene3D G3DSA:3.90.226.10 1 267 1.1E-78 T 14-10-2018 Amir_1712 2517ed7bec45c14d1d2914012bebe763 531 Gene3D G3DSA:3.90.226.10 268 531 8.8E-87 T 14-10-2018 Amir_1712 2517ed7bec45c14d1d2914012bebe763 531 SUPERFAMILY SSF52096 232 512 5.85E-72 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_1712 2517ed7bec45c14d1d2914012bebe763 531 SUPERFAMILY SSF52096 20 269 1.99E-60 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_0656 aa1c4530a908463d4e602a98fec783ec 323 Gene3D G3DSA:3.40.50.2020 152 296 4.4E-108 T 14-10-2018 Amir_0656 aa1c4530a908463d4e602a98fec783ec 323 SUPERFAMILY SSF53271 74 311 5.59E-58 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Amir_0656 aa1c4530a908463d4e602a98fec783ec 323 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 133 148 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Amir_0656 aa1c4530a908463d4e602a98fec783ec 323 Gene3D G3DSA:3.40.50.2020 12 307 4.4E-108 T 14-10-2018 Amir_0656 aa1c4530a908463d4e602a98fec783ec 323 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 9 125 1.0E-42 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Amir_0656 aa1c4530a908463d4e602a98fec783ec 323 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 9 320 44.086 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Amir_0656 aa1c4530a908463d4e602a98fec783ec 323 SMART SM01400 9 125 3.0E-68 T 14-10-2018 Amir_0656 aa1c4530a908463d4e602a98fec783ec 323 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 10 320 3.5E-112 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Amir_0656 aa1c4530a908463d4e602a98fec783ec 323 Pfam PF14572 Phosphoribosyl synthetase-associated domain 213 319 2.7E-15 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Amir_0271 ce18ab034445b7235c52cecf30f455d2 443 PIRSF PIRSF016719 52 443 1.4E-124 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 Amir_0271 ce18ab034445b7235c52cecf30f455d2 443 Gene3D G3DSA:3.90.1150.140 281 427 1.1E-118 T 14-10-2018 Amir_0271 ce18ab034445b7235c52cecf30f455d2 443 Gene3D G3DSA:3.40.50.12170 65 442 1.1E-118 T 14-10-2018 Amir_0271 ce18ab034445b7235c52cecf30f455d2 443 Pfam PF07075 Protein of unknown function (DUF1343) 83 442 1.3E-118 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 Amir_4792 eb58342d847b9ed0f4314124cb3c0819 241 SUPERFAMILY SSF51735 5 237 2.38E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4792 eb58342d847b9ed0f4314124cb3c0819 241 Gene3D G3DSA:3.40.50.720 1 239 1.7E-66 T 14-10-2018 Amir_4792 eb58342d847b9ed0f4314124cb3c0819 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 4.2E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4792 eb58342d847b9ed0f4314124cb3c0819 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 4.2E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4792 eb58342d847b9ed0f4314124cb3c0819 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 4.2E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4792 eb58342d847b9ed0f4314124cb3c0819 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 4.2E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4792 eb58342d847b9ed0f4314124cb3c0819 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 4.2E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4792 eb58342d847b9ed0f4314124cb3c0819 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 236 2.4E-49 T 14-10-2018 Amir_4792 eb58342d847b9ed0f4314124cb3c0819 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 169 0.0059 T 14-10-2018 Amir_1231 8021ffc65720e4b0c074b39100b6e00a 238 Gene3D G3DSA:3.40.50.1400 120 231 1.2E-18 T 14-10-2018 Amir_1231 8021ffc65720e4b0c074b39100b6e00a 238 Gene3D G3DSA:3.40.50.1400 1 114 1.2E-26 T 14-10-2018 Amir_1231 8021ffc65720e4b0c074b39100b6e00a 238 SUPERFAMILY SSF53800 2 228 2.62E-37 T 14-10-2018 Amir_1231 8021ffc65720e4b0c074b39100b6e00a 238 Pfam PF01903 CbiX 5 105 4.5E-20 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 Amir_1231 8021ffc65720e4b0c074b39100b6e00a 238 Pfam PF01903 CbiX 130 223 2.7E-8 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 Amir_6557 9da7b33ad7982b5d50f36a394f00297f 465 SUPERFAMILY SSF64153 4 224 6.28E-45 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Amir_6557 9da7b33ad7982b5d50f36a394f00297f 465 Pfam PF03853 YjeF-related protein N-terminus 25 173 6.8E-36 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Amir_6557 9da7b33ad7982b5d50f36a394f00297f 465 Pfam PF01256 Carbohydrate kinase 228 442 7.4E-55 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Amir_6557 9da7b33ad7982b5d50f36a394f00297f 465 PIRSF PIRSF017184 3 463 2.4E-82 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 Amir_6557 9da7b33ad7982b5d50f36a394f00297f 465 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 203 464 19.185 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Amir_6557 9da7b33ad7982b5d50f36a394f00297f 465 Gene3D G3DSA:3.40.1190.20 201 464 1.3E-68 T 14-10-2018 IPR029056 Ribokinase-like Amir_6557 9da7b33ad7982b5d50f36a394f00297f 465 Gene3D G3DSA:3.40.50.10260 3 195 8.3E-42 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Amir_6557 9da7b33ad7982b5d50f36a394f00297f 465 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 402 412 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site Amir_6557 9da7b33ad7982b5d50f36a394f00297f 465 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 6 191 19.164 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Amir_6557 9da7b33ad7982b5d50f36a394f00297f 465 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 220 442 7.9E-46 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Amir_6557 9da7b33ad7982b5d50f36a394f00297f 465 SUPERFAMILY SSF53613 207 459 7.48E-51 T 14-10-2018 IPR029056 Ribokinase-like Amir_0830 13d007e71446c3c93e08edf0d63eddeb 214 SUPERFAMILY SSF48498 96 207 1.71E-23 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_0830 13d007e71446c3c93e08edf0d63eddeb 214 Gene3D G3DSA:1.10.357.10 13 210 1.5E-50 T 14-10-2018 Amir_0830 13d007e71446c3c93e08edf0d63eddeb 214 SUPERFAMILY SSF46689 18 97 6.98E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0830 13d007e71446c3c93e08edf0d63eddeb 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 43 4.1E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0830 13d007e71446c3c93e08edf0d63eddeb 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 51 74 4.1E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0830 13d007e71446c3c93e08edf0d63eddeb 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 75 8.9E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1400 0517857e52fadf344a803fa097b13f12 356 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 237 249 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Amir_1400 0517857e52fadf344a803fa097b13f12 356 SUPERFAMILY SSF48576 36 355 5.14E-74 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_1400 0517857e52fadf344a803fa097b13f12 356 Pfam PF00348 Polyprenyl synthetase 44 291 3.9E-47 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Amir_1400 0517857e52fadf344a803fa097b13f12 356 Gene3D G3DSA:1.10.600.10 6 356 1.4E-112 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_1400 0517857e52fadf344a803fa097b13f12 356 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 93 107 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Amir_2401 26be0f70d503a018272b697f9a841566 276 SUPERFAMILY SSF63380 7 131 1.67E-9 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amir_2401 26be0f70d503a018272b697f9a841566 276 Pfam PF04954 Siderophore-interacting protein 150 263 1.9E-38 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain Amir_2401 26be0f70d503a018272b697f9a841566 276 Gene3D G3DSA:3.40.50.80 145 276 2.3E-42 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amir_2401 26be0f70d503a018272b697f9a841566 276 Gene3D G3DSA:2.40.30.10 2 130 1.7E-34 T 14-10-2018 Amir_2401 26be0f70d503a018272b697f9a841566 276 Pfam PF08021 Siderophore-interacting FAD-binding domain 16 130 7.6E-35 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting Amir_0341 5829d4a76b0f9026d695cb15915e17a1 248 Pfam PF12697 Alpha/beta hydrolase family 13 233 5.6E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_0341 5829d4a76b0f9026d695cb15915e17a1 248 Gene3D G3DSA:3.40.50.1820 1 243 1.1E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0341 5829d4a76b0f9026d695cb15915e17a1 248 SUPERFAMILY SSF53474 4 242 2.66E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4420 f3f3493a01dc4d61f4d51e486239a587 181 SUPERFAMILY SSF69118 1 173 4.56E-53 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amir_4420 f3f3493a01dc4d61f4d51e486239a587 181 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 57 103 1.3E-12 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Amir_4420 f3f3493a01dc4d61f4d51e486239a587 181 Gene3D G3DSA:1.20.1290.10 14 175 2.4E-44 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amir_4420 f3f3493a01dc4d61f4d51e486239a587 181 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 2 170 2.3E-27 T 14-10-2018 IPR010195 Uncharacterised peroxidase-related Amir_4420 f3f3493a01dc4d61f4d51e486239a587 181 Pfam PF02627 Carboxymuconolactone decarboxylase family 46 115 3.9E-8 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Amir_2172 a1509442fcc3f32b26e787f81913849f 321 SUPERFAMILY SSF161098 36 321 1.96E-50 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2172 a1509442fcc3f32b26e787f81913849f 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 314 6.1E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_2172 a1509442fcc3f32b26e787f81913849f 321 Gene3D G3DSA:1.10.3720.10 31 312 2.8E-57 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1403 961ea212225cc747479bb292d59d392a 217 Pfam PF11353 Protein of unknown function (DUF3153) 63 205 4.2E-8 T 14-10-2018 IPR021499 Protein of unknown function DUF3153 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 PRINTS PR00359 B-class P450 signature 354 363 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 PRINTS PR00359 B-class P450 signature 363 374 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 PRINTS PR00359 B-class P450 signature 305 332 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 PRINTS PR00359 B-class P450 signature 210 232 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 PRINTS PR00359 B-class P450 signature 156 172 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 PRINTS PR00359 B-class P450 signature 173 188 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 PRINTS PR00359 B-class P450 signature 109 120 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 PRINTS PR00359 B-class P450 signature 333 348 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 PRINTS PR00359 B-class P450 signature 287 298 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 PRINTS PR00385 P450 superfamily signature 287 298 9.5E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 PRINTS PR00385 P450 superfamily signature 363 374 9.5E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 PRINTS PR00385 P450 superfamily signature 354 363 9.5E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 PRINTS PR00385 P450 superfamily signature 252 269 9.5E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 Gene3D G3DSA:1.10.630.10 22 414 7.0E-112 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 Pfam PF00067 Cytochrome P450 213 383 2.1E-23 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 356 365 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_3662 a639cf2bdd6b85b39085edf8a9b8b835 414 SUPERFAMILY SSF48264 32 414 2.75E-87 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1552 cac864107523176de571b0ced922a039 350 SUPERFAMILY SSF51726 10 348 1.71E-100 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Amir_1552 cac864107523176de571b0ced922a039 350 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 12 348 7.8E-124 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Amir_1552 cac864107523176de571b0ced922a039 350 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 13 348 1.5E-119 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Amir_1552 cac864107523176de571b0ced922a039 350 Gene3D G3DSA:3.20.20.210 3 350 4.3E-140 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Amir_1552 cac864107523176de571b0ced922a039 350 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 26 35 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Amir_1552 cac864107523176de571b0ced922a039 350 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 10 350 45.969 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Amir_1552 cac864107523176de571b0ced922a039 350 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 143 159 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Amir_0863 89c290cbdf42bebfc59b298a805576a2 428 Pfam PF05193 Peptidase M16 inactive domain 172 352 1.6E-25 T 14-10-2018 IPR007863 Peptidase M16, C-terminal Amir_0863 89c290cbdf42bebfc59b298a805576a2 428 SUPERFAMILY SSF63411 3 221 3.67E-51 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amir_0863 89c290cbdf42bebfc59b298a805576a2 428 Gene3D G3DSA:3.30.830.10 226 423 3.2E-37 T 14-10-2018 Amir_0863 89c290cbdf42bebfc59b298a805576a2 428 Pfam PF00675 Insulinase (Peptidase family M16) 16 131 1.0E-18 T 14-10-2018 IPR011765 Peptidase M16, N-terminal Amir_0863 89c290cbdf42bebfc59b298a805576a2 428 Gene3D G3DSA:3.30.830.10 3 223 1.1E-61 T 14-10-2018 Amir_0863 89c290cbdf42bebfc59b298a805576a2 428 SUPERFAMILY SSF63411 231 420 5.67E-25 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amir_5477 7fb0fcdc5e23df8d4c64bfcccc8a7997 128 Gene3D G3DSA:3.30.1330.40 3 128 1.6E-40 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_5477 7fb0fcdc5e23df8d4c64bfcccc8a7997 128 SUPERFAMILY SSF55298 4 127 2.51E-37 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_5477 7fb0fcdc5e23df8d4c64bfcccc8a7997 128 Pfam PF01042 Endoribonuclease L-PSP 9 126 3.3E-32 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Amir_5477 7fb0fcdc5e23df8d4c64bfcccc8a7997 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 6 126 1.1E-32 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Amir_3771 b300bc2c1d0a541461d932db215dd955 464 Gene3D G3DSA:3.40.640.10 36 281 3.2E-87 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_3771 b300bc2c1d0a541461d932db215dd955 464 SUPERFAMILY SSF53383 5 378 1.35E-84 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_3771 b300bc2c1d0a541461d932db215dd955 464 Gene3D G3DSA:3.90.1150.10 6 372 3.2E-87 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_3771 b300bc2c1d0a541461d932db215dd955 464 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 49 316 4.6E-21 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Amir_1312 d65c9ec09dd6c08bd00cea510367a30e 341 SUPERFAMILY SSF51735 6 208 2.54E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1312 d65c9ec09dd6c08bd00cea510367a30e 341 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 129 203 6.6E-18 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Amir_1312 d65c9ec09dd6c08bd00cea510367a30e 341 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 77 1.9E-11 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Amir_1312 d65c9ec09dd6c08bd00cea510367a30e 341 PIRSF PIRSF000103 3 90 1.4E-19 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Amir_1312 d65c9ec09dd6c08bd00cea510367a30e 341 PIRSF PIRSF000103 112 333 5.5E-43 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Amir_1312 d65c9ec09dd6c08bd00cea510367a30e 341 SUPERFAMILY SSF48179 204 332 8.28E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_1312 d65c9ec09dd6c08bd00cea510367a30e 341 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 206 326 4.9E-32 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 Amir_1312 d65c9ec09dd6c08bd00cea510367a30e 341 Gene3D G3DSA:1.10.1040.10 204 332 1.0E-36 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amir_2287 424972573e617e91a2bc477cfd07ad9c 840 Gene3D G3DSA:3.30.450.20 304 418 2.4E-11 T 14-10-2018 Amir_2287 424972573e617e91a2bc477cfd07ad9c 840 Pfam PF00563 EAL domain 613 835 1.1E-30 T 14-10-2018 IPR001633 EAL domain Amir_2287 424972573e617e91a2bc477cfd07ad9c 840 SUPERFAMILY SSF55073 436 594 1.65E-33 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_2287 424972573e617e91a2bc477cfd07ad9c 840 SUPERFAMILY SSF141868 612 837 7.06E-30 T 14-10-2018 IPR035919 EAL domain superfamily Amir_2287 424972573e617e91a2bc477cfd07ad9c 840 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 427 588 2.8E-27 T 14-10-2018 IPR000160 GGDEF domain Amir_2287 424972573e617e91a2bc477cfd07ad9c 840 Gene3D G3DSA:3.20.20.450 604 840 5.9E-42 T 14-10-2018 IPR035919 EAL domain superfamily Amir_2287 424972573e617e91a2bc477cfd07ad9c 840 Pfam PF08447 PAS fold 329 412 3.7E-7 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Amir_2287 424972573e617e91a2bc477cfd07ad9c 840 Gene3D G3DSA:3.30.70.270 425 603 1.8E-38 T 14-10-2018 Amir_2287 424972573e617e91a2bc477cfd07ad9c 840 SUPERFAMILY SSF55785 307 416 1.26E-14 T 14-10-2018 IPR035965 PAS domain superfamily Amir_2287 424972573e617e91a2bc477cfd07ad9c 840 SMART SM00267 420 592 2.1E-39 T 14-10-2018 IPR000160 GGDEF domain Amir_2287 424972573e617e91a2bc477cfd07ad9c 840 SMART SM00052 602 839 6.9E-11 T 14-10-2018 IPR001633 EAL domain Amir_2287 424972573e617e91a2bc477cfd07ad9c 840 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 313 420 5.8E-8 T 14-10-2018 IPR000014 PAS domain Amir_2287 424972573e617e91a2bc477cfd07ad9c 840 Pfam PF00990 Diguanylate cyclase, GGDEF domain 432 585 7.4E-31 T 14-10-2018 IPR000160 GGDEF domain Amir_6718 0a2b44bd7f528ca35b18b6bc01c10509 209 SUPERFAMILY SSF53254 5 194 6.15E-36 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_6718 0a2b44bd7f528ca35b18b6bc01c10509 209 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 189 5.1E-35 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_6718 0a2b44bd7f528ca35b18b6bc01c10509 209 Gene3D G3DSA:3.40.50.1240 2 197 3.0E-30 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_6718 0a2b44bd7f528ca35b18b6bc01c10509 209 SMART SM00855 5 157 6.7E-16 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_0339 a71946cbf535489dfb5924e6143815ba 103 Gene3D G3DSA:3.30.70.100 1 99 5.9E-36 T 14-10-2018 Amir_0339 a71946cbf535489dfb5924e6143815ba 103 SUPERFAMILY SSF54909 1 96 5.78E-23 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_0339 a71946cbf535489dfb5924e6143815ba 103 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 70 1.8E-15 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Amir_0161 f94e01b909e529455ff489a86ce56a75 416 Pfam PF08341 Thioester domain 118 181 1.3E-8 T 14-10-2018 IPR013552 Thioester domain Amir_0161 f94e01b909e529455ff489a86ce56a75 416 Gene3D G3DSA:1.10.150.480 112 193 1.2E-6 T 14-10-2018 Amir_0161 f94e01b909e529455ff489a86ce56a75 416 TIGRFAM TIGR03934 TQXA_dom: TQXA domain 122 168 1.1E-16 T 14-10-2018 IPR023849 Uncharacterised domain CHP03934, TQXA Amir_0161 f94e01b909e529455ff489a86ce56a75 416 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 381 414 0.0023 T 14-10-2018 Amir_5237 e8735d3e23c2db6310e96527939231f1 92 SUPERFAMILY SSF63562 17 88 1.92E-23 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Amir_5237 e8735d3e23c2db6310e96527939231f1 92 Pfam PF01192 RNA polymerase Rpb6 24 86 1.3E-15 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Amir_5237 e8735d3e23c2db6310e96527939231f1 92 SMART SM01409 24 88 9.5E-15 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Amir_5237 e8735d3e23c2db6310e96527939231f1 92 Gene3D G3DSA:3.90.940.10 17 92 3.6E-20 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Amir_5237 e8735d3e23c2db6310e96527939231f1 92 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 17 89 14.444 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_5237 e8735d3e23c2db6310e96527939231f1 92 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 17 87 3.4E-27 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amir_4009 720ce3f72fc1fbe03430f4bd26b6f6bd 381 Gene3D G3DSA:3.30.360.10 141 380 1.6E-67 T 14-10-2018 Amir_4009 720ce3f72fc1fbe03430f4bd26b6f6bd 381 SUPERFAMILY SSF51735 50 173 2.7E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4009 720ce3f72fc1fbe03430f4bd26b6f6bd 381 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 34 138 1.1E-7 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amir_4009 720ce3f72fc1fbe03430f4bd26b6f6bd 381 SUPERFAMILY SSF55347 146 346 7.06E-32 T 14-10-2018 Amir_4009 720ce3f72fc1fbe03430f4bd26b6f6bd 381 Gene3D G3DSA:3.40.50.720 1 140 1.9E-31 T 14-10-2018 Amir_4009 720ce3f72fc1fbe03430f4bd26b6f6bd 381 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 152 234 2.5E-4 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Amir_1113 277b1916f55808b1f3a606c157246821 460 SUPERFAMILY SSF52540 214 442 8.14E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1113 277b1916f55808b1f3a606c157246821 460 Gene3D G3DSA:3.40.50.300 191 448 6.4E-30 T 14-10-2018 Amir_0428 a155f9528811d8f22689168dc4acd01f 94 Pfam PF11662 Protein of unknown function (DUF3263) 14 85 1.7E-35 T 14-10-2018 IPR021678 Protein of unknown function DUF3263 Amir_6982 34af3ebc2c49091d488c07cbf376c171 340 SUPERFAMILY SSF52518 19 198 1.77E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_6982 34af3ebc2c49091d488c07cbf376c171 340 SMART SM00861 20 195 1.2E-70 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amir_6982 34af3ebc2c49091d488c07cbf376c171 340 SUPERFAMILY SSF52922 211 336 3.53E-34 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_6982 34af3ebc2c49091d488c07cbf376c171 340 Pfam PF02780 Transketolase, C-terminal domain 212 330 6.2E-35 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Amir_6982 34af3ebc2c49091d488c07cbf376c171 340 Pfam PF02779 Transketolase, pyrimidine binding domain 19 194 1.0E-45 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amir_6982 34af3ebc2c49091d488c07cbf376c171 340 Gene3D G3DSA:3.40.50.970 16 210 2.0E-79 T 14-10-2018 Amir_6982 34af3ebc2c49091d488c07cbf376c171 340 Gene3D G3DSA:3.40.50.920 211 339 4.1E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_2743 ecf2a370493cdad7fd5ba050b0b00dd2 360 Pfam PF12698 ABC-2 family transporter protein 24 334 7.4E-25 T 14-10-2018 Amir_3420 8d1dc6658575314111d7eb454e178032 143 Pfam PF01957 NfeD-like C-terminal, partner-binding 8 140 1.4E-18 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain Amir_3420 8d1dc6658575314111d7eb454e178032 143 SUPERFAMILY SSF141322 76 140 7.72E-8 T 14-10-2018 Amir_3420 8d1dc6658575314111d7eb454e178032 143 Gene3D G3DSA:2.40.50.140 84 141 4.1E-18 T 14-10-2018 Amir_2268 fea1eaf208d12e907460df20543f2aa3 204 SMART SM00954 48 171 6.9E-43 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 Amir_2268 fea1eaf208d12e907460df20543f2aa3 204 Gene3D G3DSA:3.30.460.10 2 153 1.6E-48 T 14-10-2018 Amir_2268 fea1eaf208d12e907460df20543f2aa3 204 Gene3D G3DSA:1.10.287.860 154 204 3.1E-18 T 14-10-2018 Amir_2268 fea1eaf208d12e907460df20543f2aa3 204 Pfam PF04607 Region found in RelA / SpoT proteins 48 169 1.8E-32 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 Amir_2268 fea1eaf208d12e907460df20543f2aa3 204 SUPERFAMILY SSF81301 13 201 1.1E-53 T 14-10-2018 Amir_6034 94cd426a45094a609403accd8e298cd3 506 Gene3D G3DSA:3.90.1300.10 4 493 6.2E-184 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Amir_6034 94cd426a45094a609403accd8e298cd3 506 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 487 91.555 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Amir_6034 94cd426a45094a609403accd8e298cd3 506 PIRSF PIRSF001221 1 452 4.2E-44 T 14-10-2018 Amir_6034 94cd426a45094a609403accd8e298cd3 506 PIRSF PIRSF001221 444 487 0.47 T 14-10-2018 Amir_6034 94cd426a45094a609403accd8e298cd3 506 SUPERFAMILY SSF75304 1 484 7.06E-159 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Amir_6034 94cd426a45094a609403accd8e298cd3 506 ProSitePatterns PS00571 Amidases signature. 154 185 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Amir_6034 94cd426a45094a609403accd8e298cd3 506 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 14 484 9.4E-186 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Amir_6034 94cd426a45094a609403accd8e298cd3 506 Pfam PF01425 Amidase 25 474 7.1E-158 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Amir_5803 017a45cd607e8759aa274fc2e1b4a9f1 151 SUPERFAMILY SSF48619 34 141 3.67E-27 T 14-10-2018 IPR036444 Phospholipase A2 domain superfamily GO:0004623|GO:0006644|GO:0050482 KEGG: 00564+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Amir_5803 017a45cd607e8759aa274fc2e1b4a9f1 151 Pfam PF09056 Prokaryotic phospholipase A2 36 141 4.4E-36 T 14-10-2018 IPR015141 Phospholipase A2, prokaryotic/fungal Amir_5803 017a45cd607e8759aa274fc2e1b4a9f1 151 Gene3D G3DSA:1.20.90.10 28 143 9.7E-35 T 14-10-2018 IPR036444 Phospholipase A2 domain superfamily GO:0004623|GO:0006644|GO:0050482 KEGG: 00564+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Amir_5529 b11e740f63bee7bfdff4c4e91a7019e1 202 SUPERFAMILY SSF52540 14 117 4.92E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5529 b11e740f63bee7bfdff4c4e91a7019e1 202 Gene3D G3DSA:3.40.50.300 13 138 2.1E-8 T 14-10-2018 Amir_4482 d0bd66fabe7e509850f1fdffb3695c05 385 Gene3D G3DSA:3.30.420.40 83 374 8.7E-67 T 14-10-2018 Amir_4482 d0bd66fabe7e509850f1fdffb3695c05 385 Pfam PF00480 ROK family 83 377 1.1E-43 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_4482 d0bd66fabe7e509850f1fdffb3695c05 385 Gene3D G3DSA:1.10.10.10 3 74 2.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4482 d0bd66fabe7e509850f1fdffb3695c05 385 SUPERFAMILY SSF53067 82 380 2.54E-42 T 14-10-2018 Amir_4482 d0bd66fabe7e509850f1fdffb3695c05 385 Gene3D G3DSA:3.30.420.40 205 361 8.7E-67 T 14-10-2018 Amir_4482 d0bd66fabe7e509850f1fdffb3695c05 385 SUPERFAMILY SSF46785 8 72 9.23E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2472 761998eadb7656f8d11b7f5b57723b08 125 Pfam PF01740 STAS domain 15 117 3.1E-12 T 14-10-2018 IPR002645 STAS domain Amir_2472 761998eadb7656f8d11b7f5b57723b08 125 Gene3D G3DSA:3.30.750.24 9 123 1.0E-20 T 14-10-2018 IPR036513 STAS domain superfamily Amir_2472 761998eadb7656f8d11b7f5b57723b08 125 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 12 113 1.7E-17 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Amir_2472 761998eadb7656f8d11b7f5b57723b08 125 SUPERFAMILY SSF52091 13 121 7.65E-17 T 14-10-2018 IPR036513 STAS domain superfamily Amir_2499 344c6684f5a69096b677208a83c211f1 272 SUPERFAMILY SSF52266 29 254 1.32E-57 T 14-10-2018 Amir_2499 344c6684f5a69096b677208a83c211f1 272 Gene3D G3DSA:3.40.50.1110 27 263 1.2E-69 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_2499 344c6684f5a69096b677208a83c211f1 272 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 33 254 2.5E-27 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_4922 c8e6266920e23c8e802583989b1cad03 131 SUPERFAMILY SSF69754 9 92 2.35E-5 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like Amir_0741 19ec0d449f43364cbc8e0e439ced81c5 116 Gene3D G3DSA:2.60.20.30 30 115 1.0E-13 T 14-10-2018 IPR015791 Antimicrobial/protein inhibitor, gamma-crystallin-like Amir_0741 19ec0d449f43364cbc8e0e439ced81c5 116 Pfam PF09076 Beta/Gamma crystallin 45 114 1.1E-29 T 14-10-2018 IPR015161 Streptomyces killer toxin-like, beta/gamma crystallin Amir_2612 8b6aa89c0898c076d5bd09b794ee9b5f 160 SMART SM00347 34 137 1.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2612 8b6aa89c0898c076d5bd09b794ee9b5f 160 Pfam PF12802 MarR family 45 99 2.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2612 8b6aa89c0898c076d5bd09b794ee9b5f 160 Gene3D G3DSA:1.10.10.10 8 155 7.6E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2612 8b6aa89c0898c076d5bd09b794ee9b5f 160 SUPERFAMILY SSF46785 3 152 1.79E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4184 37a44c53cadde5839c45803840b6af1a 536 Gene3D G3DSA:1.10.287.950 220 536 3.4E-58 T 14-10-2018 Amir_4184 37a44c53cadde5839c45803840b6af1a 536 Pfam PF00672 HAMP domain 221 256 1.2E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_4184 37a44c53cadde5839c45803840b6af1a 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 341 507 1.2E-28 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_4184 37a44c53cadde5839c45803840b6af1a 536 SMART SM00283 281 535 3.7E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_4184 37a44c53cadde5839c45803840b6af1a 536 SMART SM00304 221 273 9.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_4184 37a44c53cadde5839c45803840b6af1a 536 SUPERFAMILY SSF58104 241 534 8.89E-58 T 14-10-2018 Amir_2422 c53ab1debec30d47e967c9c3762ec384 230 SUPERFAMILY SSF46689 8 87 1.13E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2422 c53ab1debec30d47e967c9c3762ec384 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 64 1.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2422 c53ab1debec30d47e967c9c3762ec384 230 Gene3D G3DSA:1.10.357.10 4 169 7.4E-30 T 14-10-2018 Amir_6851 15bd59224c35cf84bfc1fa46af4632a0 335 Gene3D G3DSA:3.40.50.2300 157 318 2.2E-77 T 14-10-2018 Amir_6851 15bd59224c35cf84bfc1fa46af4632a0 335 Pfam PF13407 Periplasmic binding protein domain 54 298 2.0E-39 T 14-10-2018 IPR025997 Periplasmic binding protein Amir_6851 15bd59224c35cf84bfc1fa46af4632a0 335 SUPERFAMILY SSF53822 52 326 5.22E-50 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_6851 15bd59224c35cf84bfc1fa46af4632a0 335 Gene3D G3DSA:3.40.50.2300 63 316 2.2E-77 T 14-10-2018 Amir_4538 318c900abc3a47be0d06bb4f609526db 451 SUPERFAMILY SSF52777 8 178 3.22E-28 T 14-10-2018 Amir_4538 318c900abc3a47be0d06bb4f609526db 451 Gene3D G3DSA:3.30.559.10 1 186 3.4E-30 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_4538 318c900abc3a47be0d06bb4f609526db 451 Pfam PF00668 Condensation domain 29 321 2.1E-31 T 14-10-2018 IPR001242 Condensation domain Amir_4538 318c900abc3a47be0d06bb4f609526db 451 SUPERFAMILY SSF52777 184 425 2.78E-24 T 14-10-2018 Amir_4538 318c900abc3a47be0d06bb4f609526db 451 Gene3D G3DSA:3.30.559.30 187 433 9.1E-27 T 14-10-2018 Amir_0622 1270c84a139f6da857afad37fab35f5d 166 SUPERFAMILY SSF53218 10 160 1.57E-32 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amir_0622 1270c84a139f6da857afad37fab35f5d 166 Pfam PF00994 Probable molybdopterin binding domain 13 149 1.6E-24 T 14-10-2018 IPR001453 MoaB/Mog domain Amir_0622 1270c84a139f6da857afad37fab35f5d 166 Gene3D G3DSA:3.40.980.10 6 164 1.7E-43 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amir_0622 1270c84a139f6da857afad37fab35f5d 166 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 10 149 3.8E-27 T 14-10-2018 IPR001453 MoaB/Mog domain Amir_0622 1270c84a139f6da857afad37fab35f5d 166 SMART SM00852 12 156 3.1E-14 T 14-10-2018 IPR001453 MoaB/Mog domain Amir_6819 4c1d02a86c606f6d780836e83b2aa428 304 Gene3D G3DSA:1.10.3720.10 78 304 7.9E-35 T 14-10-2018 IPR035906 MetI-like superfamily Amir_6819 4c1d02a86c606f6d780836e83b2aa428 304 SUPERFAMILY SSF161098 36 292 1.21E-39 T 14-10-2018 IPR035906 MetI-like superfamily Amir_6819 4c1d02a86c606f6d780836e83b2aa428 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 303 1.5E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_6819 4c1d02a86c606f6d780836e83b2aa428 304 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 30 296 1.4E-80 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Amir_2866 9dc23984bf50ce01c9b3b8aa15480b04 108 Pfam PF10824 Excreted virulence factor EspC, type VII ESX diderm 9 90 2.0E-5 T 14-10-2018 IPR022536 ESX-1 secretion-associated protein EspC GO:0009306 Amir_0097 d80756f2707683f56c0073716d08d70f 209 SUPERFAMILY SSF52172 3 134 9.11E-30 T 14-10-2018 IPR011006 CheY-like superfamily Amir_0097 d80756f2707683f56c0073716d08d70f 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.9E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0097 d80756f2707683f56c0073716d08d70f 209 SMART SM00421 147 204 5.8E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0097 d80756f2707683f56c0073716d08d70f 209 SUPERFAMILY SSF46894 139 208 1.84E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_0097 d80756f2707683f56c0073716d08d70f 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0097 d80756f2707683f56c0073716d08d70f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0097 d80756f2707683f56c0073716d08d70f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0097 d80756f2707683f56c0073716d08d70f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_0097 d80756f2707683f56c0073716d08d70f 209 Pfam PF00072 Response regulator receiver domain 5 117 1.1E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0097 d80756f2707683f56c0073716d08d70f 209 SMART SM00448 3 116 9.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0097 d80756f2707683f56c0073716d08d70f 209 Gene3D G3DSA:3.40.50.12740 3 208 1.2E-64 T 14-10-2018 Amir_1273 a742fc7ec15ad53efb50a7d786487197 241 Pfam PF03575 Peptidase family S51 34 205 2.5E-23 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 Amir_1273 a742fc7ec15ad53efb50a7d786487197 241 SUPERFAMILY SSF52317 35 209 3.97E-18 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_1273 a742fc7ec15ad53efb50a7d786487197 241 Gene3D G3DSA:3.40.50.880 21 209 3.0E-24 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_2477 4f77d1a34da938253fcdd6114301e7fc 205 SUPERFAMILY SSF52499 6 204 1.05E-49 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Amir_2477 4f77d1a34da938253fcdd6114301e7fc 205 Gene3D G3DSA:3.40.50.850 6 205 2.4E-57 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Amir_2477 4f77d1a34da938253fcdd6114301e7fc 205 Pfam PF00857 Isochorismatase family 12 189 1.1E-42 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Amir_3227 37504a718b43d9aae5eeef83300a6ddf 277 Gene3D G3DSA:1.10.260.40 29 99 1.2E-7 T 14-10-2018 Amir_3227 37504a718b43d9aae5eeef83300a6ddf 277 Pfam PF13560 Helix-turn-helix domain 11 90 6.1E-16 T 14-10-2018 Amir_3227 37504a718b43d9aae5eeef83300a6ddf 277 SMART SM00530 15 88 1.4E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_3227 37504a718b43d9aae5eeef83300a6ddf 277 Gene3D G3DSA:3.30.450.180 112 276 1.4E-9 T 14-10-2018 Amir_3227 37504a718b43d9aae5eeef83300a6ddf 277 SUPERFAMILY SSF47413 35 87 1.19E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_0668 3eb69e15c6e178a781eff0e55395e26e 1069 Gene3D G3DSA:2.130.10.10 296 663 3.5E-103 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_0668 3eb69e15c6e178a781eff0e55395e26e 1069 SUPERFAMILY SSF52096 674 1055 2.15E-65 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_0668 3eb69e15c6e178a781eff0e55395e26e 1069 Gene3D G3DSA:2.120.10.60 4 279 1.9E-93 T 14-10-2018 Amir_0668 3eb69e15c6e178a781eff0e55395e26e 1069 Gene3D G3DSA:3.90.226.10 851 1065 1.1E-63 T 14-10-2018 Amir_0668 3eb69e15c6e178a781eff0e55395e26e 1069 SUPERFAMILY SSF50156 754 843 2.73E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Amir_0668 3eb69e15c6e178a781eff0e55395e26e 1069 Pfam PF07676 WD40-like Beta Propeller Repeat 464 494 0.035 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_0668 3eb69e15c6e178a781eff0e55395e26e 1069 Pfam PF07676 WD40-like Beta Propeller Repeat 58 79 0.0084 T 14-10-2018 IPR011659 WD40-like Beta Propeller Amir_0668 3eb69e15c6e178a781eff0e55395e26e 1069 Pfam PF14684 Tricorn protease C1 domain 677 743 4.2E-27 T 14-10-2018 IPR028204 Tricorn protease C1 domain Amir_0668 3eb69e15c6e178a781eff0e55395e26e 1069 Pfam PF14685 Tricorn protease PDZ domain 754 843 1.8E-29 T 14-10-2018 IPR029414 Tricorn protease, PDZ domain Amir_0668 3eb69e15c6e178a781eff0e55395e26e 1069 PIRSF PIRSF036421 5 1062 0.0 T 14-10-2018 IPR012393 Tricorn protease GO:0008236 Amir_0668 3eb69e15c6e178a781eff0e55395e26e 1069 SMART SM00245 839 1029 5.4E-22 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Amir_0668 3eb69e15c6e178a781eff0e55395e26e 1069 Pfam PF03572 Peptidase family S41 872 1028 1.9E-19 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Amir_0668 3eb69e15c6e178a781eff0e55395e26e 1069 SUPERFAMILY SSF69304 20 277 7.32E-35 T 14-10-2018 Amir_0668 3eb69e15c6e178a781eff0e55395e26e 1069 Gene3D G3DSA:3.30.750.44 674 744 5.7E-28 T 14-10-2018 Amir_0668 3eb69e15c6e178a781eff0e55395e26e 1069 SUPERFAMILY SSF69322 244 644 2.35E-26 T 14-10-2018 Amir_0668 3eb69e15c6e178a781eff0e55395e26e 1069 Gene3D G3DSA:2.30.42.10 752 850 5.7E-6 T 14-10-2018 Amir_3830 92fcc8b694c4c60fc817248ff0ab0c5f 511 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_3830 92fcc8b694c4c60fc817248ff0ab0c5f 511 SUPERFAMILY SSF56801 3 499 8.11E-68 T 14-10-2018 Amir_3830 92fcc8b694c4c60fc817248ff0ab0c5f 511 Pfam PF00501 AMP-binding enzyme 6 408 4.2E-51 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_3830 92fcc8b694c4c60fc817248ff0ab0c5f 511 Gene3D G3DSA:3.40.50.12780 2 407 3.1E-58 T 14-10-2018 Amir_6296 337d1400b33f140234661a732bde7807 420 PIRSF PIRSF000505 2 420 3.3E-117 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Amir_6296 337d1400b33f140234661a732bde7807 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 410 5.1E-113 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Amir_6296 337d1400b33f140234661a732bde7807 420 Gene3D G3DSA:3.65.10.10 24 238 2.7E-142 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Amir_6296 337d1400b33f140234661a732bde7807 420 ProSitePatterns PS00104 EPSP synthase signature 1. 87 101 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Amir_6296 337d1400b33f140234661a732bde7807 420 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 12 419 29.498 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Amir_6296 337d1400b33f140234661a732bde7807 420 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 18 417 5.4E-117 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Amir_6296 337d1400b33f140234661a732bde7807 420 ProSitePatterns PS00885 EPSP synthase signature 2. 332 350 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Amir_6296 337d1400b33f140234661a732bde7807 420 Gene3D G3DSA:3.65.10.10 16 409 2.7E-142 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Amir_6296 337d1400b33f140234661a732bde7807 420 SUPERFAMILY SSF55205 9 415 3.92E-110 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Amir_1932 da46bd8827fbb33f17e814713bed0275 143 Gene3D G3DSA:3.30.530.20 1 122 1.0E-9 T 14-10-2018 IPR023393 START-like domain superfamily Amir_1932 da46bd8827fbb33f17e814713bed0275 143 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 2 114 5.2E-7 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase Amir_1932 da46bd8827fbb33f17e814713bed0275 143 SUPERFAMILY SSF55961 2 117 5.0E-11 T 14-10-2018 Amir_4689 ab63f6615b301f38d5d65491fbb000a6 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 195 1.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4689 ab63f6615b301f38d5d65491fbb000a6 216 SMART SM00448 1 120 5.0E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4689 ab63f6615b301f38d5d65491fbb000a6 216 Pfam PF00072 Response regulator receiver domain 3 99 7.5E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4689 ab63f6615b301f38d5d65491fbb000a6 216 SMART SM00421 148 211 1.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4689 ab63f6615b301f38d5d65491fbb000a6 216 SUPERFAMILY SSF52172 2 151 7.97E-18 T 14-10-2018 IPR011006 CheY-like superfamily Amir_4689 ab63f6615b301f38d5d65491fbb000a6 216 Gene3D G3DSA:3.40.50.2300 1 99 1.3E-14 T 14-10-2018 Amir_4689 ab63f6615b301f38d5d65491fbb000a6 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 2.6E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4689 ab63f6615b301f38d5d65491fbb000a6 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 2.6E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4689 ab63f6615b301f38d5d65491fbb000a6 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 2.6E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4689 ab63f6615b301f38d5d65491fbb000a6 216 SUPERFAMILY SSF46894 132 196 3.4E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4689 ab63f6615b301f38d5d65491fbb000a6 216 Gene3D G3DSA:1.10.10.10 103 216 2.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0305 d7c5c221d425acffb6b36697a89cfd00 172 ProSitePatterns PS01117 MarR-type HTH domain signature. 76 110 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Amir_0305 d7c5c221d425acffb6b36697a89cfd00 172 SUPERFAMILY SSF46785 26 154 4.23E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0305 d7c5c221d425acffb6b36697a89cfd00 172 SMART SM00347 37 137 1.2E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0305 d7c5c221d425acffb6b36697a89cfd00 172 Pfam PF01047 MarR family 47 101 4.1E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0305 d7c5c221d425acffb6b36697a89cfd00 172 Gene3D G3DSA:1.10.10.10 2 150 4.0E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_7053 7813cab76d2e219ba88c8acc91fb8ba2 399 SUPERFAMILY SSF55073 238 397 1.18E-39 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_7053 7813cab76d2e219ba88c8acc91fb8ba2 399 SMART SM00267 221 399 1.8E-42 T 14-10-2018 IPR000160 GGDEF domain Amir_7053 7813cab76d2e219ba88c8acc91fb8ba2 399 Pfam PF00990 Diguanylate cyclase, GGDEF domain 232 394 4.6E-39 T 14-10-2018 IPR000160 GGDEF domain Amir_7053 7813cab76d2e219ba88c8acc91fb8ba2 399 Gene3D G3DSA:3.30.70.270 222 397 2.9E-47 T 14-10-2018 Amir_7053 7813cab76d2e219ba88c8acc91fb8ba2 399 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 230 398 3.0E-43 T 14-10-2018 IPR000160 GGDEF domain Amir_1905 c0c4021c252298f1dadc9c6db3a14a4a 336 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amir_1905 c0c4021c252298f1dadc9c6db3a14a4a 336 Gene3D G3DSA:3.90.180.10 5 327 9.5E-122 T 14-10-2018 Amir_1905 c0c4021c252298f1dadc9c6db3a14a4a 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 134 9.0E-32 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_1905 c0c4021c252298f1dadc9c6db3a14a4a 336 SMART SM00829 10 334 1.7E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_1905 c0c4021c252298f1dadc9c6db3a14a4a 336 Pfam PF00107 Zinc-binding dehydrogenase 175 298 1.2E-29 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_1905 c0c4021c252298f1dadc9c6db3a14a4a 336 Gene3D G3DSA:3.40.50.720 148 285 9.5E-122 T 14-10-2018 Amir_1905 c0c4021c252298f1dadc9c6db3a14a4a 336 SUPERFAMILY SSF51735 139 303 2.99E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1905 c0c4021c252298f1dadc9c6db3a14a4a 336 SUPERFAMILY SSF50129 1 180 2.59E-55 T 14-10-2018 IPR011032 GroES-like superfamily Amir_2425 f357684f8b99fb288c1ae6fd7699ace1 543 Gene3D G3DSA:3.30.410.10 197 479 2.8E-178 T 14-10-2018 Amir_2425 f357684f8b99fb288c1ae6fd7699ace1 543 Pfam PF05199 GMC oxidoreductase 482 533 4.0E-12 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Amir_2425 f357684f8b99fb288c1ae6fd7699ace1 543 SUPERFAMILY SSF51905 55 542 9.26E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2425 f357684f8b99fb288c1ae6fd7699ace1 543 Pfam PF00890 FAD binding domain 56 85 6.2E-5 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_2425 f357684f8b99fb288c1ae6fd7699ace1 543 Gene3D G3DSA:3.50.50.60 55 539 2.8E-178 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2425 f357684f8b99fb288c1ae6fd7699ace1 543 SUPERFAMILY SSF54373 359 487 9.02E-38 T 14-10-2018 Amir_1893 0e5941b49dd04c48e4b29f82c1d01a1c 323 Pfam PF14325 Domain of unknown function (DUF4383) 171 294 1.2E-39 T 14-10-2018 IPR025492 Protein of unknown function DUF4383 Amir_3576 6d2c847f7f089999a0d6245530682b54 439 PRINTS PR00359 B-class P450 signature 332 359 6.5E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3576 6d2c847f7f089999a0d6245530682b54 439 PRINTS PR00359 B-class P450 signature 390 401 6.5E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3576 6d2c847f7f089999a0d6245530682b54 439 PRINTS PR00359 B-class P450 signature 381 390 6.5E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3576 6d2c847f7f089999a0d6245530682b54 439 PRINTS PR00359 B-class P450 signature 173 189 6.5E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3576 6d2c847f7f089999a0d6245530682b54 439 PRINTS PR00359 B-class P450 signature 315 326 6.5E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3576 6d2c847f7f089999a0d6245530682b54 439 PRINTS PR00359 B-class P450 signature 234 256 6.5E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3576 6d2c847f7f089999a0d6245530682b54 439 PRINTS PR00359 B-class P450 signature 360 375 6.5E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3576 6d2c847f7f089999a0d6245530682b54 439 PRINTS PR00359 B-class P450 signature 126 137 6.5E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3576 6d2c847f7f089999a0d6245530682b54 439 PRINTS PR00359 B-class P450 signature 190 205 6.5E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3576 6d2c847f7f089999a0d6245530682b54 439 SUPERFAMILY SSF48264 28 439 3.54E-84 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3576 6d2c847f7f089999a0d6245530682b54 439 Gene3D G3DSA:1.10.630.10 35 439 4.1E-115 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3576 6d2c847f7f089999a0d6245530682b54 439 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 383 392 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_3576 6d2c847f7f089999a0d6245530682b54 439 Pfam PF00067 Cytochrome P450 313 409 1.1E-13 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_5196 c4a4636c5aed77cee568aeee356f00d3 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 3.4E-20 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Amir_5196 c4a4636c5aed77cee568aeee356f00d3 77 Pfam PF03840 Preprotein translocase SecG subunit 4 73 1.9E-17 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Amir_5196 c4a4636c5aed77cee568aeee356f00d3 77 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.0E-6 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Amir_5196 c4a4636c5aed77cee568aeee356f00d3 77 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.0E-6 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Amir_5196 c4a4636c5aed77cee568aeee356f00d3 77 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 1.0E-6 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Amir_0985 65d8b1aa330b1ac942f3a7428a9bfca8 224 SUPERFAMILY SSF56784 1 222 9.45E-52 T 14-10-2018 IPR036412 HAD-like superfamily Amir_0985 65d8b1aa330b1ac942f3a7428a9bfca8 224 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 5 221 2.1E-61 T 14-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 Amir_0985 65d8b1aa330b1ac942f3a7428a9bfca8 224 Gene3D G3DSA:3.40.50.1000 5 211 8.6E-58 T 14-10-2018 IPR023214 HAD superfamily Amir_0985 65d8b1aa330b1ac942f3a7428a9bfca8 224 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 1 220 36.665 T 14-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 Amir_0985 65d8b1aa330b1ac942f3a7428a9bfca8 224 Gene3D G3DSA:1.10.720.60 16 98 8.6E-58 T 14-10-2018 Amir_1494 75d136a5c61cd65ada0bd4c019bb41ef 141 SUPERFAMILY SSF69500 2 140 2.35E-41 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Amir_1494 75d136a5c61cd65ada0bd4c019bb41ef 141 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 141 28.55 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Amir_1494 75d136a5c61cd65ada0bd4c019bb41ef 141 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 140 7.7E-48 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Amir_1494 75d136a5c61cd65ada0bd4c019bb41ef 141 Gene3D G3DSA:3.50.80.10 1 141 1.5E-40 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Amir_1494 75d136a5c61cd65ada0bd4c019bb41ef 141 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 3 140 5.1E-38 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Amir_0782 e41d02493e01c526f6284a9b28097e9e 295 Gene3D G3DSA:1.10.357.10 59 250 3.4E-40 T 14-10-2018 Amir_0782 e41d02493e01c526f6284a9b28097e9e 295 Pfam PF00440 Bacterial regulatory proteins, tetR family 75 114 8.8E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0782 e41d02493e01c526f6284a9b28097e9e 295 Pfam PF13305 WHG domain 150 233 5.2E-11 T 14-10-2018 IPR025996 WHG domain Amir_0782 e41d02493e01c526f6284a9b28097e9e 295 SUPERFAMILY SSF48498 146 243 6.23E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_0782 e41d02493e01c526f6284a9b28097e9e 295 SUPERFAMILY SSF46689 61 148 5.99E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5188 f6b00fa943f59f812c68f2806baa3126 539 Gene3D G3DSA:3.40.50.10490 324 379 5.1E-10 T 14-10-2018 Amir_5188 f6b00fa943f59f812c68f2806baa3126 539 Gene3D G3DSA:3.40.50.10490 49 216 4.1E-35 T 14-10-2018 Amir_5188 f6b00fa943f59f812c68f2806baa3126 539 Gene3D G3DSA:3.40.50.10490 217 299 8.0E-10 T 14-10-2018 Amir_5188 f6b00fa943f59f812c68f2806baa3126 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 189 207 1.2E-6 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5188 f6b00fa943f59f812c68f2806baa3126 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 263 284 1.2E-6 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5188 f6b00fa943f59f812c68f2806baa3126 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 85 104 1.2E-6 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_5188 f6b00fa943f59f812c68f2806baa3126 539 SUPERFAMILY SSF53697 18 377 4.89E-73 T 14-10-2018 Amir_5188 f6b00fa943f59f812c68f2806baa3126 539 Pfam PF00342 Phosphoglucose isomerase 82 285 1.7E-6 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amir_2429 8c0b0af42a0f8bfc425005e55e44b0bb 61 Pfam PF04149 Domain of unknown function (DUF397) 8 57 1.3E-16 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_6546 10f86026d2b86228166578e1b82e53da 350 Pfam PF00814 Glycoprotease family 30 318 1.8E-95 T 14-10-2018 IPR000905 Gcp-like domain Amir_6546 10f86026d2b86228166578e1b82e53da 350 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 138 150 1.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family Amir_6546 10f86026d2b86228166578e1b82e53da 350 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 7 20 1.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family Amir_6546 10f86026d2b86228166578e1b82e53da 350 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 162 183 1.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family Amir_6546 10f86026d2b86228166578e1b82e53da 350 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 83 103 1.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family Amir_6546 10f86026d2b86228166578e1b82e53da 350 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 275 284 1.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family Amir_6546 10f86026d2b86228166578e1b82e53da 350 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 104 123 1.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family Amir_6546 10f86026d2b86228166578e1b82e53da 350 ProSitePatterns PS01016 Glycoprotease family signature. 103 123 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 Amir_6546 10f86026d2b86228166578e1b82e53da 350 Gene3D G3DSA:3.30.420.40 136 305 2.0E-113 T 14-10-2018 Amir_6546 10f86026d2b86228166578e1b82e53da 350 Gene3D G3DSA:3.30.420.40 6 326 2.0E-113 T 14-10-2018 Amir_6546 10f86026d2b86228166578e1b82e53da 350 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 6 324 1.1E-123 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Amir_6546 10f86026d2b86228166578e1b82e53da 350 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 7 318 2.1E-94 T 14-10-2018 IPR017861 Kae1/TsaD family Amir_6546 10f86026d2b86228166578e1b82e53da 350 SUPERFAMILY SSF53067 5 320 2.04E-37 T 14-10-2018 Amir_6546 10f86026d2b86228166578e1b82e53da 350 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 4 344 60.099 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Amir_1380 72818b134922473f78472538bf97d69a 343 SUPERFAMILY SSF54001 226 340 1.91E-29 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amir_1380 72818b134922473f78472538bf97d69a 343 Gene3D G3DSA:3.90.1720.10 147 342 7.1E-39 T 14-10-2018 Amir_1380 72818b134922473f78472538bf97d69a 343 Pfam PF00877 NlpC/P60 family 243 327 2.9E-18 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Amir_2692 c2ba245f7f5b427a6a8baaffc5e24899 450 SUPERFAMILY SSF102114 151 347 1.57E-6 T 14-10-2018 Amir_6865 d82661fc8e3209b2bb5f2c8afd06db41 125 Gene3D G3DSA:3.30.1050.40 1 125 1.8E-50 T 14-10-2018 Amir_0150 16a75b2f1ea82b61fa68f1a2f9b83962 448 Pfam PF00823 PPE family 57 148 2.2E-7 T 14-10-2018 IPR000030 PPE family Amir_0150 16a75b2f1ea82b61fa68f1a2f9b83962 448 Gene3D G3DSA:1.20.1260.20 49 153 2.2E-9 T 14-10-2018 IPR038332 PPE superfamily Amir_0150 16a75b2f1ea82b61fa68f1a2f9b83962 448 SUPERFAMILY SSF140459 44 149 1.62E-6 T 14-10-2018 Amir_2315 4f9a18b1cc1dece5c75255dbe79f830f 680 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 129 152 - T 14-10-2018 IPR025505 FHIPEP conserved site Amir_2315 4f9a18b1cc1dece5c75255dbe79f830f 680 Pfam PF00771 FHIPEP family 18 660 1.2E-243 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amir_2315 4f9a18b1cc1dece5c75255dbe79f830f 680 Gene3D G3DSA:3.40.30.60 341 481 1.1E-39 T 14-10-2018 Amir_2315 4f9a18b1cc1dece5c75255dbe79f830f 680 PIRSF PIRSF005419 1 677 1.3E-249 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amir_2315 4f9a18b1cc1dece5c75255dbe79f830f 680 Gene3D G3DSA:1.10.490.80 573 672 7.9E-14 T 14-10-2018 Amir_2315 4f9a18b1cc1dece5c75255dbe79f830f 680 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 25 38 2.3E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amir_2315 4f9a18b1cc1dece5c75255dbe79f830f 680 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 143 161 2.3E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amir_2315 4f9a18b1cc1dece5c75255dbe79f830f 680 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 124 140 2.3E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amir_2315 4f9a18b1cc1dece5c75255dbe79f830f 680 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 62 81 2.3E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amir_2315 4f9a18b1cc1dece5c75255dbe79f830f 680 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 224 238 2.3E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amir_2315 4f9a18b1cc1dece5c75255dbe79f830f 680 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 173 190 2.3E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amir_2315 4f9a18b1cc1dece5c75255dbe79f830f 680 Gene3D G3DSA:1.10.8.540 482 572 1.8E-19 T 14-10-2018 Amir_4458 20e53d3b726bd65e8553230d78ec0240 272 SUPERFAMILY SSF47413 30 81 1.65E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_4458 20e53d3b726bd65e8553230d78ec0240 272 Gene3D G3DSA:1.10.260.40 27 82 2.6E-9 T 14-10-2018 Amir_4458 20e53d3b726bd65e8553230d78ec0240 272 SMART SM00530 10 82 4.8E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_4458 20e53d3b726bd65e8553230d78ec0240 272 Pfam PF13560 Helix-turn-helix domain 6 85 4.2E-18 T 14-10-2018 Amir_6534 4bc9a1440e8bd07c1eb48dcb02a53352 377 SMART SM01240 15 375 6.7E-17 T 14-10-2018 Amir_6534 4bc9a1440e8bd07c1eb48dcb02a53352 377 SUPERFAMILY SSF51412 9 376 1.44E-60 T 14-10-2018 Amir_6534 4bc9a1440e8bd07c1eb48dcb02a53352 377 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 266 286 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Amir_6534 4bc9a1440e8bd07c1eb48dcb02a53352 377 TIGRFAM TIGR01304 IMP_DH_rel_2: IMP dehydrogenase family protein 5 375 4.1E-170 T 14-10-2018 IPR005992 IMP dehydrogenase-related 2 GO:0016491|GO:0055114 Amir_6534 4bc9a1440e8bd07c1eb48dcb02a53352 377 Gene3D G3DSA:3.20.20.70 16 376 7.5E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_6534 4bc9a1440e8bd07c1eb48dcb02a53352 377 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 18 307 8.6E-35 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Amir_5341 597ec76d70220c19ce9430240543ea26 350 Gene3D G3DSA:3.40.710.10 61 318 9.4E-39 T 14-10-2018 Amir_5341 597ec76d70220c19ce9430240543ea26 350 Pfam PF13354 Beta-lactamase enzyme family 91 287 1.0E-37 T 14-10-2018 Amir_5341 597ec76d70220c19ce9430240543ea26 350 SUPERFAMILY SSF56601 89 293 2.75E-27 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_0496 ea4753b0465f7822c201fc693a246e9c 283 SUPERFAMILY SSF75217 116 282 2.75E-39 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Amir_0496 ea4753b0465f7822c201fc693a246e9c 283 SUPERFAMILY SSF55315 29 124 1.39E-11 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Amir_0496 ea4753b0465f7822c201fc693a246e9c 283 Pfam PF00588 SpoU rRNA Methylase family 140 280 4.4E-30 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Amir_0496 ea4753b0465f7822c201fc693a246e9c 283 Gene3D G3DSA:3.40.1280.10 128 283 1.3E-44 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Amir_2636 ee75fafc86c905b98015e1cf23dd55a5 262 SUPERFAMILY SSF56176 17 165 4.52E-22 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amir_2636 ee75fafc86c905b98015e1cf23dd55a5 262 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 25 165 5.8E-16 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 Amir_2636 ee75fafc86c905b98015e1cf23dd55a5 262 Gene3D G3DSA:3.30.465.10 53 165 1.2E-18 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amir_6860 c6113c2bef8e0003b80f33991c34be33 247 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 16 132 4.4E-9 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 Amir_6860 c6113c2bef8e0003b80f33991c34be33 247 Pfam PF07398 MDMPI C-terminal domain 149 241 1.4E-8 T 14-10-2018 IPR010872 MDMPI C-terminal Amir_6860 c6113c2bef8e0003b80f33991c34be33 247 SUPERFAMILY SSF109854 7 129 7.1E-6 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_7092 e2e80acc47dcf8fe8d4be0a05a6d1c58 331 Pfam PF02195 ParB-like nuclease domain 62 151 1.6E-24 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Amir_7092 e2e80acc47dcf8fe8d4be0a05a6d1c58 331 SUPERFAMILY SSF109709 143 250 2.35E-32 T 14-10-2018 Amir_7092 e2e80acc47dcf8fe8d4be0a05a6d1c58 331 Gene3D G3DSA:3.90.1530.30 74 136 4.5E-26 T 14-10-2018 Amir_7092 e2e80acc47dcf8fe8d4be0a05a6d1c58 331 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 59 236 4.0E-61 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Amir_7092 e2e80acc47dcf8fe8d4be0a05a6d1c58 331 Gene3D G3DSA:1.10.10.2830 138 251 7.0E-35 T 14-10-2018 Amir_7092 e2e80acc47dcf8fe8d4be0a05a6d1c58 331 SUPERFAMILY SSF110849 51 154 1.46E-29 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Amir_7092 e2e80acc47dcf8fe8d4be0a05a6d1c58 331 SMART SM00470 61 151 4.3E-32 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Amir_4320 891940a09e3dc72d388662ae5ced63ac 554 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 95 457 1.4E-70 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Amir_4320 891940a09e3dc72d388662ae5ced63ac 554 Gene3D G3DSA:3.40.190.10 78 298 8.3E-98 T 14-10-2018 Amir_4320 891940a09e3dc72d388662ae5ced63ac 554 SUPERFAMILY SSF53850 46 552 1.99E-99 T 14-10-2018 Amir_4320 891940a09e3dc72d388662ae5ced63ac 554 Gene3D G3DSA:3.10.105.10 299 520 8.3E-98 T 14-10-2018 Amir_4320 891940a09e3dc72d388662ae5ced63ac 554 PIRSF PIRSF002741 10 554 2.1E-72 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amir_6057 2716ba8a2d4713edf0efa214ee9c4915 499 Gene3D G3DSA:3.20.110.10 4 383 9.2E-107 T 14-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily Amir_6057 2716ba8a2d4713edf0efa214ee9c4915 499 Pfam PF03065 Glycosyl hydrolase family 57 10 333 2.1E-22 T 14-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 Amir_6057 2716ba8a2d4713edf0efa214ee9c4915 499 SUPERFAMILY SSF88688 391 497 7.19E-17 T 14-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily Amir_6057 2716ba8a2d4713edf0efa214ee9c4915 499 Gene3D G3DSA:1.20.1430.10 392 499 3.5E-15 T 14-10-2018 IPR037090 Glycoside hydrolase families 57, central domain KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Amir_6057 2716ba8a2d4713edf0efa214ee9c4915 499 SUPERFAMILY SSF88713 6 383 7.12E-93 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Amir_6057 2716ba8a2d4713edf0efa214ee9c4915 499 Pfam PF09210 Domain of unknown function (DUF1957) 410 497 8.1E-19 T 14-10-2018 IPR015293 Domain of unknown function DUF1957 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Amir_4433 270bf2fd2dace8a4a80e80de9bfe7bd6 215 Gene3D G3DSA:3.40.50.12740 2 211 6.9E-62 T 14-10-2018 Amir_4433 270bf2fd2dace8a4a80e80de9bfe7bd6 215 Pfam PF00072 Response regulator receiver domain 4 115 4.3E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4433 270bf2fd2dace8a4a80e80de9bfe7bd6 215 SMART SM00421 148 205 8.5E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4433 270bf2fd2dace8a4a80e80de9bfe7bd6 215 SMART SM00448 2 114 1.6E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4433 270bf2fd2dace8a4a80e80de9bfe7bd6 215 SUPERFAMILY SSF46894 139 211 1.9E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_4433 270bf2fd2dace8a4a80e80de9bfe7bd6 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 205 4.8E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4433 270bf2fd2dace8a4a80e80de9bfe7bd6 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4433 270bf2fd2dace8a4a80e80de9bfe7bd6 215 SUPERFAMILY SSF52172 2 129 2.13E-30 T 14-10-2018 IPR011006 CheY-like superfamily Amir_4433 270bf2fd2dace8a4a80e80de9bfe7bd6 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 1.5E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4433 270bf2fd2dace8a4a80e80de9bfe7bd6 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 1.5E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4433 270bf2fd2dace8a4a80e80de9bfe7bd6 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 1.5E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4292 9ccd816f59222a57e72c6e2884a1cf76 362 Gene3D G3DSA:3.40.50.1820 5 362 6.9E-114 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4292 9ccd816f59222a57e72c6e2884a1cf76 362 PRINTS PR00412 Epoxide hydrolase signature 304 320 3.6E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4292 9ccd816f59222a57e72c6e2884a1cf76 362 PRINTS PR00412 Epoxide hydrolase signature 97 115 3.6E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4292 9ccd816f59222a57e72c6e2884a1cf76 362 PRINTS PR00412 Epoxide hydrolase signature 175 188 3.6E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4292 9ccd816f59222a57e72c6e2884a1cf76 362 PRINTS PR00412 Epoxide hydrolase signature 117 132 3.6E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4292 9ccd816f59222a57e72c6e2884a1cf76 362 PRINTS PR00412 Epoxide hydrolase signature 335 357 3.6E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4292 9ccd816f59222a57e72c6e2884a1cf76 362 Pfam PF06441 Epoxide hydrolase N terminus 6 105 2.2E-26 T 14-10-2018 IPR010497 Epoxide hydrolase, N-terminal Reactome: R-HSA-211945 Amir_4292 9ccd816f59222a57e72c6e2884a1cf76 362 SUPERFAMILY SSF53474 7 360 9.73E-85 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4292 9ccd816f59222a57e72c6e2884a1cf76 362 PIRSF PIRSF001112 4 362 2.7E-80 T 14-10-2018 IPR016292 Epoxide hydrolase GO:0033961 Reactome: R-HSA-211945 Amir_0934 4550bcbcaa53ecfd1d19f43be841dbb9 436 Pfam PF03109 ABC1 family 112 227 1.1E-32 T 14-10-2018 IPR004147 UbiB domain Amir_0934 4550bcbcaa53ecfd1d19f43be841dbb9 436 SUPERFAMILY SSF56112 95 307 5.75E-28 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_5739 3988feade11e86e79394a71a6f567814 242 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 5 223 25.306 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Amir_5739 3988feade11e86e79394a71a6f567814 242 SUPERFAMILY SSF52540 7 205 1.91E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5739 3988feade11e86e79394a71a6f567814 242 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 10 173 1.1E-31 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Amir_5739 3988feade11e86e79394a71a6f567814 242 Gene3D G3DSA:3.40.50.300 6 227 4.3E-62 T 14-10-2018 Amir_5739 3988feade11e86e79394a71a6f567814 242 Pfam PF13500 AAA domain 8 204 4.0E-34 T 14-10-2018 Amir_5739 3988feade11e86e79394a71a6f567814 242 PIRSF PIRSF006755 4 210 9.1E-40 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Amir_5116 6c870f4806104d360fc9f79e309bb3b9 692 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 164 669 2.5E-86 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Amir_5116 6c870f4806104d360fc9f79e309bb3b9 692 Pfam PF02446 4-alpha-glucanotransferase 194 666 9.1E-107 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Amir_5116 6c870f4806104d360fc9f79e309bb3b9 692 SUPERFAMILY SSF51445 188 682 8.75E-129 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_5116 6c870f4806104d360fc9f79e309bb3b9 692 Gene3D G3DSA:3.20.20.80 185 673 3.9E-117 T 14-10-2018 Amir_3066 ae0a1275eb5533bc7aadc2bc6befc967 547 PIRSF PIRSF002741 17 539 1.5E-75 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amir_3066 ae0a1275eb5533bc7aadc2bc6befc967 547 SUPERFAMILY SSF53850 47 545 3.98E-99 T 14-10-2018 Amir_3066 ae0a1275eb5533bc7aadc2bc6befc967 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 92 446 1.3E-75 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Amir_3066 ae0a1275eb5533bc7aadc2bc6befc967 547 Gene3D G3DSA:3.40.190.10 63 530 6.2E-173 T 14-10-2018 Amir_3066 ae0a1275eb5533bc7aadc2bc6befc967 547 Gene3D G3DSA:3.10.105.10 270 518 6.2E-173 T 14-10-2018 Amir_6459 e7100200faa976edaa3d14affd397026 422 Pfam PF15644 Papain fold toxin 1, glutamine deamidase 96 198 3.0E-15 T 14-10-2018 IPR028908 Tox-PL domain Amir_6459 e7100200faa976edaa3d14affd397026 422 Pfam PF15567 Immunity protein 35 229 314 2.3E-28 T 14-10-2018 IPR029082 Immunity protein 35 Amir_0055 0c72b90a9e6da232432bebf66d2120f3 1171 Gene3D G3DSA:3.90.550.10 816 1060 6.5E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0055 0c72b90a9e6da232432bebf66d2120f3 1171 Gene3D G3DSA:3.40.50.150 38 223 2.5E-26 T 14-10-2018 Amir_0055 0c72b90a9e6da232432bebf66d2120f3 1171 SUPERFAMILY SSF53448 843 1056 1.03E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0055 0c72b90a9e6da232432bebf66d2120f3 1171 Pfam PF00535 Glycosyl transferase family 2 847 974 9.2E-15 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_0055 0c72b90a9e6da232432bebf66d2120f3 1171 SUPERFAMILY SSF53335 57 227 3.73E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_0055 0c72b90a9e6da232432bebf66d2120f3 1171 Pfam PF08241 Methyltransferase domain 65 162 1.9E-11 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_7022 c4efd5a53c6166d80626eee5cdc8a479 143 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 11 94 3.5E-14 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amir_7022 c4efd5a53c6166d80626eee5cdc8a479 143 TIGRFAM TIGR03618 Rv1155_F420: PPOX class probable F420-dependent enzyme 11 136 9.2E-36 T 14-10-2018 IPR019920 F420-binding domain, putative Amir_7022 c4efd5a53c6166d80626eee5cdc8a479 143 Gene3D G3DSA:2.30.110.10 7 143 4.1E-30 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_7022 c4efd5a53c6166d80626eee5cdc8a479 143 SUPERFAMILY SSF50475 17 132 6.17E-27 T 14-10-2018 Amir_3902 dd003a5f1d20e88a7e3f7a7edd3a088b 166 Pfam PF07883 Cupin domain 49 115 2.4E-20 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Amir_3902 dd003a5f1d20e88a7e3f7a7edd3a088b 166 SUPERFAMILY SSF51182 28 141 1.78E-31 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_3902 dd003a5f1d20e88a7e3f7a7edd3a088b 166 Gene3D G3DSA:2.60.120.10 4 166 8.6E-42 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_4965 1c94b6328e55f9c67fe596f01e9c641a 308 Gene3D G3DSA:3.40.50.1820 1 306 1.2E-76 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4965 1c94b6328e55f9c67fe596f01e9c641a 308 PIRSF PIRSF006431 1 308 3.1E-97 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 Amir_4965 1c94b6328e55f9c67fe596f01e9c641a 308 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 6 302 6.0E-80 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 Amir_4965 1c94b6328e55f9c67fe596f01e9c641a 308 SUPERFAMILY SSF53474 4 295 8.31E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4965 1c94b6328e55f9c67fe596f01e9c641a 308 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 60 71 2.5E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Amir_4965 1c94b6328e55f9c67fe596f01e9c641a 308 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 108 122 2.5E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Amir_4965 1c94b6328e55f9c67fe596f01e9c641a 308 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 34 42 2.5E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Amir_4965 1c94b6328e55f9c67fe596f01e9c641a 308 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 2.2E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4965 1c94b6328e55f9c67fe596f01e9c641a 308 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 2.2E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4965 1c94b6328e55f9c67fe596f01e9c641a 308 PRINTS PR00111 Alpha/beta hydrolase fold signature 122 135 2.2E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4965 1c94b6328e55f9c67fe596f01e9c641a 308 Pfam PF00561 alpha/beta hydrolase fold 32 192 1.7E-25 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_6427 b50296029f4383879c1e1b64cf0d7841 66 Pfam PF01402 Ribbon-helix-helix protein, copG family 2 35 4.7E-7 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Amir_6427 b50296029f4383879c1e1b64cf0d7841 66 SUPERFAMILY SSF47598 1 36 1.37E-5 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Amir_6593 1ea0221c97809dfc832fe20642e5d852 183 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Amir_6593 1ea0221c97809dfc832fe20642e5d852 183 Pfam PF00406 Adenylate kinase 5 157 2.5E-53 T 14-10-2018 Amir_6593 1ea0221c97809dfc832fe20642e5d852 183 Hamap MF_00235 Adenylate kinase [adk]. 1 180 43.3 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Amir_6593 1ea0221c97809dfc832fe20642e5d852 183 PRINTS PR00094 Adenylate kinase signature 129 144 2.1E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Amir_6593 1ea0221c97809dfc832fe20642e5d852 183 PRINTS PR00094 Adenylate kinase signature 146 160 2.1E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Amir_6593 1ea0221c97809dfc832fe20642e5d852 183 PRINTS PR00094 Adenylate kinase signature 4 17 2.1E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Amir_6593 1ea0221c97809dfc832fe20642e5d852 183 PRINTS PR00094 Adenylate kinase signature 32 46 2.1E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Amir_6593 1ea0221c97809dfc832fe20642e5d852 183 PRINTS PR00094 Adenylate kinase signature 81 97 2.1E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Amir_6593 1ea0221c97809dfc832fe20642e5d852 183 Gene3D G3DSA:3.40.50.300 1 180 1.2E-62 T 14-10-2018 Amir_6593 1ea0221c97809dfc832fe20642e5d852 183 SUPERFAMILY SSF52540 1 179 2.08E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_7079 dcdbb355bb7180f2ba3f8b66b3024316 502 TIGRFAM TIGR02692 tRNA_CCA_actino: CCA tRNA nucleotidyltransferase 5 460 7.0E-234 T 14-10-2018 IPR014065 tRNA adenylyltransferase Amir_7079 dcdbb355bb7180f2ba3f8b66b3024316 502 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 178 239 3.1E-17 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Amir_7079 dcdbb355bb7180f2ba3f8b66b3024316 502 SUPERFAMILY SSF81301 9 146 3.05E-33 T 14-10-2018 Amir_7079 dcdbb355bb7180f2ba3f8b66b3024316 502 Pfam PF01966 HD domain 253 377 9.3E-16 T 14-10-2018 IPR006674 HD domain Amir_7079 dcdbb355bb7180f2ba3f8b66b3024316 502 SMART SM00471 249 413 2.7E-4 T 14-10-2018 IPR003607 HD/PDEase domain Amir_7079 dcdbb355bb7180f2ba3f8b66b3024316 502 Gene3D G3DSA:1.10.3090.10 154 448 7.8E-45 T 14-10-2018 Amir_7079 dcdbb355bb7180f2ba3f8b66b3024316 502 TIGRFAM TIGR00277 HDIG: HDIG domain 250 332 3.1E-17 T 14-10-2018 IPR006675 HDIG domain Amir_7079 dcdbb355bb7180f2ba3f8b66b3024316 502 Pfam PF01743 Poly A polymerase head domain 24 149 2.5E-32 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Amir_7079 dcdbb355bb7180f2ba3f8b66b3024316 502 SUPERFAMILY SSF81891 150 458 1.57E-62 T 14-10-2018 Amir_7079 dcdbb355bb7180f2ba3f8b66b3024316 502 Gene3D G3DSA:3.30.460.10 7 152 1.3E-35 T 14-10-2018 Amir_2849 2813672599d2b08c917660fbb4d43182 628 Pfam PF02538 Hydantoinase B/oxoprolinase 5 534 1.7E-137 T 14-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Amir_7073 e8239c58b309ac27e11109b8257f32d4 248 SUPERFAMILY SSF46689 6 79 1.9E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_7073 e8239c58b309ac27e11109b8257f32d4 248 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 1.5E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_7073 e8239c58b309ac27e11109b8257f32d4 248 Gene3D G3DSA:1.10.357.10 1 246 1.8E-62 T 14-10-2018 Amir_7073 e8239c58b309ac27e11109b8257f32d4 248 SUPERFAMILY SSF48498 92 241 6.23E-22 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_7073 e8239c58b309ac27e11109b8257f32d4 248 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 8.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_7073 e8239c58b309ac27e11109b8257f32d4 248 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 8.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4921 fff042ef51fa9f8f9e7e312db383d84c 549 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 339 529 7.2E-42 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_4921 fff042ef51fa9f8f9e7e312db383d84c 549 SMART SM00065 128 291 0.0023 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_4921 fff042ef51fa9f8f9e7e312db383d84c 549 Gene3D G3DSA:3.30.450.40 121 293 2.5E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_4921 fff042ef51fa9f8f9e7e312db383d84c 549 SUPERFAMILY SSF81606 325 528 2.28E-5 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_4921 fff042ef51fa9f8f9e7e312db383d84c 549 SMART SM00331 309 530 1.6E-39 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_4921 fff042ef51fa9f8f9e7e312db383d84c 549 Gene3D G3DSA:3.60.40.10 305 529 5.6E-53 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_4921 fff042ef51fa9f8f9e7e312db383d84c 549 SUPERFAMILY SSF55781 147 290 1.02E-10 T 14-10-2018 Amir_5344 c490de93142e068f4912f2b562ddc431 444 SMART SM01091 358 436 7.0E-27 T 14-10-2018 IPR005170 Transporter-associated domain Amir_5344 c490de93142e068f4912f2b562ddc431 444 Gene3D G3DSA:3.30.465.10 363 435 7.9E-23 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amir_5344 c490de93142e068f4912f2b562ddc431 444 Pfam PF03471 Transporter associated domain 360 435 7.8E-24 T 14-10-2018 IPR005170 Transporter-associated domain Amir_5344 c490de93142e068f4912f2b562ddc431 444 SUPERFAMILY SSF54631 212 353 2.02E-27 T 14-10-2018 Amir_5344 c490de93142e068f4912f2b562ddc431 444 Pfam PF00571 CBS domain 292 342 2.7E-4 T 14-10-2018 IPR000644 CBS domain Amir_5344 c490de93142e068f4912f2b562ddc431 444 Pfam PF01595 Domain of unknown function DUF21 13 205 1.5E-30 T 14-10-2018 IPR002550 CNNM, transmembrane domain Amir_5344 c490de93142e068f4912f2b562ddc431 444 Gene3D G3DSA:3.10.580.10 201 353 1.1E-43 T 14-10-2018 Amir_5344 c490de93142e068f4912f2b562ddc431 444 SUPERFAMILY SSF56176 357 439 2.13E-23 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amir_6214 34785a1d36c5a8ac235e379b8a687dbf 551 Gene3D G3DSA:3.50.50.60 1 288 2.3E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6214 34785a1d36c5a8ac235e379b8a687dbf 551 PIRSF PIRSF036654 1 550 4.3E-275 T 14-10-2018 IPR014614 Uncharacterised conserved protein UCP036654 GO:0016627|GO:0055114 Amir_6214 34785a1d36c5a8ac235e379b8a687dbf 551 Pfam PF00890 FAD binding domain 6 532 6.8E-102 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_6214 34785a1d36c5a8ac235e379b8a687dbf 551 SUPERFAMILY SSF51905 2 550 6.32E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6214 34785a1d36c5a8ac235e379b8a687dbf 551 Gene3D G3DSA:3.50.50.60 469 550 2.1E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0476 ad7d38871a65a188e7707190ec88dc25 124 PIRSF PIRSF028777 1 124 1.1E-50 T 14-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 Amir_0476 ad7d38871a65a188e7707190ec88dc25 124 Pfam PF03733 Inner membrane component domain 4 54 1.7E-18 T 14-10-2018 IPR005185 Inner membrane component domain Amir_0476 ad7d38871a65a188e7707190ec88dc25 124 Pfam PF03733 Inner membrane component domain 68 118 1.8E-18 T 14-10-2018 IPR005185 Inner membrane component domain Amir_5872 3684ddfbdedd5249e40b6df859a3802a 221 Gene3D G3DSA:2.160.10.10 2 213 1.6E-58 T 14-10-2018 Amir_5872 3684ddfbdedd5249e40b6df859a3802a 221 SUPERFAMILY SSF51161 51 208 4.44E-42 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Amir_5872 3684ddfbdedd5249e40b6df859a3802a 221 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 149 2.8E-9 T 14-10-2018 IPR001451 Hexapeptide repeat Amir_0303 d3460d7dbfa7aa5c188b010dcafe8bb5 223 SUPERFAMILY SSF50199 69 174 3.01E-12 T 14-10-2018 Amir_0303 d3460d7dbfa7aa5c188b010dcafe8bb5 223 SMART SM00318 70 174 0.0029 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 Amir_0303 d3460d7dbfa7aa5c188b010dcafe8bb5 223 Gene3D G3DSA:2.40.50.90 73 177 2.8E-9 T 14-10-2018 IPR035437 SNase-like, OB-fold superfamily Amir_0303 d3460d7dbfa7aa5c188b010dcafe8bb5 223 Pfam PF00565 Staphylococcal nuclease homologue 128 172 1.7E-4 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 Amir_5033 0ffe154ede9bbfd98f8db4dfba07ab8f 389 Gene3D G3DSA:3.60.40.10 173 389 8.7E-50 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_5033 0ffe154ede9bbfd98f8db4dfba07ab8f 389 Gene3D G3DSA:3.40.50.2300 6 150 3.2E-20 T 14-10-2018 Amir_5033 0ffe154ede9bbfd98f8db4dfba07ab8f 389 Pfam PF00072 Response regulator receiver domain 9 108 6.5E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5033 0ffe154ede9bbfd98f8db4dfba07ab8f 389 SMART SM00448 7 119 2.7E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5033 0ffe154ede9bbfd98f8db4dfba07ab8f 389 SMART SM00331 160 387 3.1E-19 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_5033 0ffe154ede9bbfd98f8db4dfba07ab8f 389 SUPERFAMILY SSF52172 5 145 4.55E-22 T 14-10-2018 IPR011006 CheY-like superfamily Amir_5033 0ffe154ede9bbfd98f8db4dfba07ab8f 389 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 190 385 3.8E-43 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_5033 0ffe154ede9bbfd98f8db4dfba07ab8f 389 SUPERFAMILY SSF81606 181 385 8.11E-6 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_2114 dd7cb3aa0cfa62a7d53a46856b1d915d 501 Pfam PF07690 Major Facilitator Superfamily 20 408 1.3E-41 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2114 dd7cb3aa0cfa62a7d53a46856b1d915d 501 Gene3D G3DSA:1.20.1720.10 16 249 2.8E-40 T 14-10-2018 Amir_2114 dd7cb3aa0cfa62a7d53a46856b1d915d 501 SUPERFAMILY SSF103473 6 494 3.66E-64 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2114 dd7cb3aa0cfa62a7d53a46856b1d915d 501 Gene3D G3DSA:1.20.1250.20 269 489 1.1E-14 T 14-10-2018 Amir_6840 64ec536a8d2b4024cebbca3543a639ff 384 Gene3D G3DSA:1.20.1250.20 191 377 1.4E-20 T 14-10-2018 Amir_6840 64ec536a8d2b4024cebbca3543a639ff 384 SUPERFAMILY SSF103473 2 373 2.09E-47 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_6840 64ec536a8d2b4024cebbca3543a639ff 384 Pfam PF07690 Major Facilitator Superfamily 14 338 3.1E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_6840 64ec536a8d2b4024cebbca3543a639ff 384 Gene3D G3DSA:1.20.1250.20 1 185 1.9E-25 T 14-10-2018 Amir_3402 8237ff6189ec70311afbb0f04525b720 263 Gene3D G3DSA:3.90.550.10 2 254 6.6E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_3402 8237ff6189ec70311afbb0f04525b720 263 SUPERFAMILY SSF53448 14 227 5.63E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_3402 8237ff6189ec70311afbb0f04525b720 263 Pfam PF00535 Glycosyl transferase family 2 17 180 3.1E-30 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_2724 6f80b67283e2d6d270b302fae095f464 311 Gene3D G3DSA:2.40.30.10 29 156 1.4E-39 T 14-10-2018 Amir_2724 6f80b67283e2d6d270b302fae095f464 311 SUPERFAMILY SSF63380 38 156 8.6E-13 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amir_2724 6f80b67283e2d6d270b302fae095f464 311 Pfam PF08021 Siderophore-interacting FAD-binding domain 45 155 4.7E-27 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting Amir_2724 6f80b67283e2d6d270b302fae095f464 311 Gene3D G3DSA:3.40.50.80 160 296 1.3E-44 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amir_2724 6f80b67283e2d6d270b302fae095f464 311 Pfam PF04954 Siderophore-interacting protein 164 283 3.1E-37 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain Amir_6128 d4349df1e041b6c757003bfa733f99ca 176 Gene3D G3DSA:3.40.50.850 1 176 9.8E-46 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Amir_6128 d4349df1e041b6c757003bfa733f99ca 176 SUPERFAMILY SSF52499 2 175 3.27E-39 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Amir_6128 d4349df1e041b6c757003bfa733f99ca 176 Pfam PF00857 Isochorismatase family 3 143 5.5E-26 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Amir_4594 67d60febd9a7c3dcd806f146470d3bc5 327 SUPERFAMILY SSF53686 4 306 1.11E-46 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amir_4594 67d60febd9a7c3dcd806f146470d3bc5 327 Gene3D G3DSA:3.40.50.1100 12 308 6.3E-62 T 14-10-2018 Amir_4594 67d60febd9a7c3dcd806f146470d3bc5 327 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 12 305 1.1E-25 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amir_4594 67d60febd9a7c3dcd806f146470d3bc5 327 Gene3D G3DSA:3.40.50.1100 42 149 6.3E-62 T 14-10-2018 Amir_4594 67d60febd9a7c3dcd806f146470d3bc5 327 PIRSF PIRSF006278 2 314 4.3E-37 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase Amir_0004 a79b8ec786cf25d3a1ccac6fe27af093 371 ProSitePatterns PS00618 RecF protein signature 2. 314 332 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Amir_0004 a79b8ec786cf25d3a1ccac6fe27af093 371 SUPERFAMILY SSF52540 3 335 1.11E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0004 a79b8ec786cf25d3a1ccac6fe27af093 371 Gene3D G3DSA:3.40.50.300 6 346 1.1E-94 T 14-10-2018 Amir_0004 a79b8ec786cf25d3a1ccac6fe27af093 371 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 364 2.4E-121 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Amir_0004 a79b8ec786cf25d3a1ccac6fe27af093 371 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 371 97.852 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Amir_0004 a79b8ec786cf25d3a1ccac6fe27af093 371 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 347 6.6E-18 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Amir_0004 a79b8ec786cf25d3a1ccac6fe27af093 371 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Amir_0004 a79b8ec786cf25d3a1ccac6fe27af093 371 Gene3D G3DSA:1.20.1050.90 120 313 1.1E-94 T 14-10-2018 Amir_2302 bf6b47483b36816bf2669c8926d043ba 390 SUPERFAMILY SSF103473 10 385 1.09E-40 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2302 bf6b47483b36816bf2669c8926d043ba 390 Gene3D G3DSA:1.20.1250.20 6 387 1.3E-36 T 14-10-2018 Amir_2302 bf6b47483b36816bf2669c8926d043ba 390 Pfam PF05977 Transmembrane secretion effector 4 378 5.9E-30 T 14-10-2018 IPR010290 Transmembrane secretion effector Amir_6781 ca8ad5449366e62c7e818931301203e2 174 Pfam PF03551 Transcriptional regulator PadR-like family 7 76 1.7E-16 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal Amir_6781 ca8ad5449366e62c7e818931301203e2 174 Gene3D G3DSA:1.10.10.10 1 88 1.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6781 ca8ad5449366e62c7e818931301203e2 174 SUPERFAMILY SSF46785 3 166 2.26E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0661 4aa1499444de2a196b6a5955741657d7 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_0661 4aa1499444de2a196b6a5955741657d7 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.5E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0661 4aa1499444de2a196b6a5955741657d7 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.5E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0661 4aa1499444de2a196b6a5955741657d7 205 SUPERFAMILY SSF46689 3 83 9.23E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0661 4aa1499444de2a196b6a5955741657d7 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 61 4.5E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0661 4aa1499444de2a196b6a5955741657d7 205 SUPERFAMILY SSF48498 83 194 1.51E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_0661 4aa1499444de2a196b6a5955741657d7 205 Gene3D G3DSA:1.10.357.10 2 199 2.0E-48 T 14-10-2018 Amir_2090 c7a1b28a548ae27cb03556ea3bfcfab8 182 SUPERFAMILY SSF54197 18 178 2.32E-42 T 14-10-2018 IPR036265 HIT-like superfamily Amir_2090 c7a1b28a548ae27cb03556ea3bfcfab8 182 Gene3D G3DSA:3.30.428.10 7 181 1.6E-57 T 14-10-2018 IPR036265 HIT-like superfamily Amir_2090 c7a1b28a548ae27cb03556ea3bfcfab8 182 Pfam PF01230 HIT domain 58 146 9.2E-15 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Amir_4243 5a7e8480b358b9e31670d505cf729d6a 330 Gene3D G3DSA:3.20.20.100 1 328 1.3E-101 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_4243 5a7e8480b358b9e31670d505cf729d6a 330 SUPERFAMILY SSF51430 1 308 6.29E-86 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_4243 5a7e8480b358b9e31670d505cf729d6a 330 Pfam PF00248 Aldo/keto reductase family 16 307 4.3E-61 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_0223 72ee143de645c471e33b2d1de86d8ab5 140 Gene3D G3DSA:2.20.25.10 1 45 2.3E-18 T 14-10-2018 Amir_0223 72ee143de645c471e33b2d1de86d8ab5 140 Pfam PF02566 OsmC-like protein 41 136 2.1E-20 T 14-10-2018 IPR003718 OsmC/Ohr family Amir_0223 72ee143de645c471e33b2d1de86d8ab5 140 Gene3D G3DSA:3.30.300.20 46 140 1.7E-35 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Amir_0223 72ee143de645c471e33b2d1de86d8ab5 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 137 1.8E-54 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 Amir_0223 72ee143de645c471e33b2d1de86d8ab5 140 SUPERFAMILY SSF82784 1 138 1.7E-43 T 14-10-2018 IPR036102 OsmC/Ohr superfamily Amir_3893 7329c5dfa0f68bee5ea07c87eb9daf84 290 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 25 280 9.6E-55 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 Amir_3893 7329c5dfa0f68bee5ea07c87eb9daf84 290 SUPERFAMILY SSF51197 23 287 6.41E-75 T 14-10-2018 Amir_3893 7329c5dfa0f68bee5ea07c87eb9daf84 290 Gene3D G3DSA:3.60.130.10 14 289 4.6E-77 T 14-10-2018 Amir_6118 35c13dcafcddcd8cbcdf183f6f4d64ea 562 Pfam PF00474 Sodium:solute symporter family 46 461 5.0E-55 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Amir_6118 35c13dcafcddcd8cbcdf183f6f4d64ea 562 Gene3D G3DSA:1.20.1730.10 35 518 1.2E-112 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Amir_6118 35c13dcafcddcd8cbcdf183f6f4d64ea 562 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 46 461 1.2E-80 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Amir_6118 35c13dcafcddcd8cbcdf183f6f4d64ea 562 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 161 186 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site Amir_4625 87f4cce1a0f5d0c75b21392fa6435327 222 Gene3D G3DSA:1.25.10.110 3 73 2.3E-5 T 14-10-2018 Amir_4625 87f4cce1a0f5d0c75b21392fa6435327 222 Gene3D G3DSA:1.25.10.10 74 217 1.3E-7 T 14-10-2018 IPR011989 Armadillo-like helical Amir_4625 87f4cce1a0f5d0c75b21392fa6435327 222 SUPERFAMILY SSF48371 11 190 2.92E-13 T 14-10-2018 IPR016024 Armadillo-type fold Amir_4894 89066d37c526911e5f8579e005099e3d 558 Gene3D G3DSA:3.30.200.20 6 89 4.5E-15 T 14-10-2018 Amir_4894 89066d37c526911e5f8579e005099e3d 558 Pfam PF00069 Protein kinase domain 15 263 1.1E-36 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_4894 89066d37c526911e5f8579e005099e3d 558 Gene3D G3DSA:1.10.510.10 90 269 2.3E-44 T 14-10-2018 Amir_4894 89066d37c526911e5f8579e005099e3d 558 SUPERFAMILY SSF56112 11 268 6.07E-62 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_4894 89066d37c526911e5f8579e005099e3d 558 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 21 43 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_4894 89066d37c526911e5f8579e005099e3d 558 SMART SM00220 15 268 2.4E-39 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_4894 89066d37c526911e5f8579e005099e3d 558 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 133 145 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_0995 cb6c2382e563fd1b6d66f9f8c0216a43 681 SMART SM00487 22 306 1.3E-4 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_0995 cb6c2382e563fd1b6d66f9f8c0216a43 681 SMART SM00491 517 646 3.2E-40 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Amir_0995 cb6c2382e563fd1b6d66f9f8c0216a43 681 SUPERFAMILY SSF52540 42 639 3.16E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0995 cb6c2382e563fd1b6d66f9f8c0216a43 681 Pfam PF13307 Helicase C-terminal domain 502 659 1.3E-26 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Amir_0995 cb6c2382e563fd1b6d66f9f8c0216a43 681 Gene3D G3DSA:3.40.50.300 25 284 1.7E-44 T 14-10-2018 Amir_0995 cb6c2382e563fd1b6d66f9f8c0216a43 681 Gene3D G3DSA:3.40.50.300 493 674 1.3E-28 T 14-10-2018 Amir_1726 096119f63f749b0061eb038fe292ad02 207 Gene3D G3DSA:2.60.40.1220 27 126 1.0E-19 T 14-10-2018 Amir_1726 096119f63f749b0061eb038fe292ad02 207 Pfam PF04234 CopC domain 27 120 8.3E-20 T 14-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 Amir_1726 096119f63f749b0061eb038fe292ad02 207 SUPERFAMILY SSF81296 26 121 4.97E-18 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_0436 4262e15d390603d25555807a98ac1fba 237 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 26 235 36.227 T 14-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Amir_0436 4262e15d390603d25555807a98ac1fba 237 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 40 234 8.3E-53 T 14-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Amir_0436 4262e15d390603d25555807a98ac1fba 237 Pfam PF02666 Phosphatidylserine decarboxylase 60 231 3.9E-31 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Amir_2974 b23ea507c041896fe5abb38909e0d77a 199 SUPERFAMILY SSF48498 78 192 2.73E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_2974 b23ea507c041896fe5abb38909e0d77a 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 5.1E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2974 b23ea507c041896fe5abb38909e0d77a 199 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 100 192 7.2E-10 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal Amir_2974 b23ea507c041896fe5abb38909e0d77a 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.6E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2974 b23ea507c041896fe5abb38909e0d77a 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.6E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2974 b23ea507c041896fe5abb38909e0d77a 199 Gene3D G3DSA:1.10.357.10 5 196 5.1E-39 T 14-10-2018 Amir_2974 b23ea507c041896fe5abb38909e0d77a 199 SUPERFAMILY SSF46689 7 71 1.3E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2076 5cd92b41c2e8e6b1a67c42716bb9c93e 454 SUPERFAMILY SSF55931 114 452 8.04E-103 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amir_2076 5cd92b41c2e8e6b1a67c42716bb9c93e 454 SMART SM01230 114 372 3.9E-105 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_2076 5cd92b41c2e8e6b1a67c42716bb9c93e 454 SUPERFAMILY SSF54368 3 113 2.09E-18 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_2076 5cd92b41c2e8e6b1a67c42716bb9c93e 454 Gene3D G3DSA:3.30.590.10 117 453 1.5E-100 T 14-10-2018 Amir_2076 5cd92b41c2e8e6b1a67c42716bb9c93e 454 Gene3D G3DSA:3.10.20.70 2 115 3.7E-8 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_2076 5cd92b41c2e8e6b1a67c42716bb9c93e 454 Pfam PF00120 Glutamine synthetase, catalytic domain 115 447 1.7E-101 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amir_5223 f50ec80ba3d3469e6b38be4c913f3405 478 Gene3D G3DSA:3.40.50.150 182 476 1.1E-53 T 14-10-2018 Amir_5223 f50ec80ba3d3469e6b38be4c913f3405 478 Pfam PF01029 NusB family 36 157 2.1E-23 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Amir_5223 f50ec80ba3d3469e6b38be4c913f3405 478 Gene3D G3DSA:1.10.940.10 33 174 6.1E-40 T 14-10-2018 IPR035926 NusB-like superfamily Amir_5223 f50ec80ba3d3469e6b38be4c913f3405 478 SUPERFAMILY SSF48013 36 190 2.29E-31 T 14-10-2018 IPR035926 NusB-like superfamily Amir_5223 f50ec80ba3d3469e6b38be4c913f3405 478 Pfam PF01189 16S rRNA methyltransferase RsmB/F 291 474 1.2E-46 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Amir_5223 f50ec80ba3d3469e6b38be4c913f3405 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 295 305 1.2E-18 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Amir_5223 f50ec80ba3d3469e6b38be4c913f3405 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 262 276 1.2E-18 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Amir_5223 f50ec80ba3d3469e6b38be4c913f3405 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 459 476 1.2E-18 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Amir_5223 f50ec80ba3d3469e6b38be4c913f3405 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 408 424 1.2E-18 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Amir_5223 f50ec80ba3d3469e6b38be4c913f3405 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 358 370 1.2E-18 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Amir_5223 f50ec80ba3d3469e6b38be4c913f3405 478 SUPERFAMILY SSF53335 179 476 1.93E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_1108 da32a09af2d344469764d0fecaf72f80 126 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 3.1E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1108 da32a09af2d344469764d0fecaf72f80 126 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 3.1E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1108 da32a09af2d344469764d0fecaf72f80 126 Gene3D G3DSA:1.10.10.10 9 118 3.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1108 da32a09af2d344469764d0fecaf72f80 126 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 5.3E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1108 da32a09af2d344469764d0fecaf72f80 126 SUPERFAMILY SSF46785 3 77 5.54E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1108 da32a09af2d344469764d0fecaf72f80 126 SMART SM00345 14 73 4.2E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5652 3d25a18f04b288c15fcfd04e19775863 166 SUPERFAMILY SSF88659 98 156 4.86E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5652 3d25a18f04b288c15fcfd04e19775863 166 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 3 160 7.1E-52 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 Amir_5652 3d25a18f04b288c15fcfd04e19775863 166 SUPERFAMILY SSF88946 3 74 3.49E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5652 3d25a18f04b288c15fcfd04e19775863 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 155 5.6E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_5652 3d25a18f04b288c15fcfd04e19775863 166 Gene3D G3DSA:1.10.10.10 83 162 8.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5652 3d25a18f04b288c15fcfd04e19775863 166 Pfam PF08281 Sigma-70, region 4 101 154 1.2E-17 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_5652 3d25a18f04b288c15fcfd04e19775863 166 Gene3D G3DSA:1.10.1740.10 1 79 3.9E-9 T 14-10-2018 Amir_5652 3d25a18f04b288c15fcfd04e19775863 166 Pfam PF04542 Sigma-70 region 2 18 77 6.5E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6870 22dc307fd20f66ba17dca370a9dbee5b 343 SUPERFAMILY SSF51735 149 303 5.73E-13 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6870 22dc307fd20f66ba17dca370a9dbee5b 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 141 6.4E-11 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_6870 22dc307fd20f66ba17dca370a9dbee5b 343 Pfam PF16912 Glucose dehydrogenase C-terminus 148 342 2.5E-48 T 14-10-2018 IPR031640 Glucose dehydrogenase, C-terminal KEGG: 00030+1.1.1.47 Amir_6870 22dc307fd20f66ba17dca370a9dbee5b 343 Gene3D G3DSA:3.40.50.720 150 316 1.1E-81 T 14-10-2018 Amir_6870 22dc307fd20f66ba17dca370a9dbee5b 343 SUPERFAMILY SSF50129 30 186 2.67E-22 T 14-10-2018 IPR011032 GroES-like superfamily Amir_6870 22dc307fd20f66ba17dca370a9dbee5b 343 Gene3D G3DSA:3.90.180.10 29 340 1.1E-81 T 14-10-2018 Amir_3185 47ba839f28dfeea87410e35a9af21f78 331 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 225 321 1.7E-25 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amir_3185 47ba839f28dfeea87410e35a9af21f78 331 Gene3D G3DSA:3.40.50.720 44 227 9.3E-44 T 14-10-2018 Amir_3185 47ba839f28dfeea87410e35a9af21f78 331 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 52 222 1.3E-40 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amir_3185 47ba839f28dfeea87410e35a9af21f78 331 Gene3D G3DSA:1.10.1040.10 228 329 6.1E-26 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amir_3185 47ba839f28dfeea87410e35a9af21f78 331 SUPERFAMILY SSF51735 49 224 8.23E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3185 47ba839f28dfeea87410e35a9af21f78 331 SUPERFAMILY SSF48179 224 326 3.83E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_3185 47ba839f28dfeea87410e35a9af21f78 331 PIRSF PIRSF000105 42 330 2.7E-92 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 Amir_5134 053699705472be8a1984b7b9e93dd988 542 Pfam PF00005 ABC transporter 17 197 2.3E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5134 053699705472be8a1984b7b9e93dd988 542 Pfam PF00005 ABC transporter 353 481 5.2E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5134 053699705472be8a1984b7b9e93dd988 542 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_5134 053699705472be8a1984b7b9e93dd988 542 SMART SM00382 26 242 2.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5134 053699705472be8a1984b7b9e93dd988 542 SMART SM00382 360 527 8.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5134 053699705472be8a1984b7b9e93dd988 542 SUPERFAMILY SSF52540 3 239 1.72E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5134 053699705472be8a1984b7b9e93dd988 542 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_5134 053699705472be8a1984b7b9e93dd988 542 Gene3D G3DSA:3.40.50.300 300 539 5.2E-55 T 14-10-2018 Amir_5134 053699705472be8a1984b7b9e93dd988 542 SUPERFAMILY SSF52540 316 527 1.31E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5134 053699705472be8a1984b7b9e93dd988 542 Pfam PF12848 ABC transporter 239 314 8.3E-9 T 14-10-2018 IPR032781 ABC-transporter extension domain Amir_2819 6cd169c7c3141526d8e3c9ee023108dd 451 Pfam PF00534 Glycosyl transferases group 1 169 333 3.8E-28 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Amir_2819 6cd169c7c3141526d8e3c9ee023108dd 451 Gene3D G3DSA:3.40.50.2000 1 116 9.3E-6 T 14-10-2018 Amir_2819 6cd169c7c3141526d8e3c9ee023108dd 451 Gene3D G3DSA:3.40.50.2000 163 337 1.5E-41 T 14-10-2018 Amir_2819 6cd169c7c3141526d8e3c9ee023108dd 451 SUPERFAMILY SSF53756 3 350 4.32E-56 T 14-10-2018 Amir_5402 f25558f25fbf0ce4e62e51ef83d54951 363 SUPERFAMILY SSF55931 3 355 7.06E-88 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amir_5402 f25558f25fbf0ce4e62e51ef83d54951 363 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 7 279 2.4E-47 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Amir_5402 f25558f25fbf0ce4e62e51ef83d54951 363 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 363 73.091 T 14-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Amir_5402 f25558f25fbf0ce4e62e51ef83d54951 363 Gene3D G3DSA:3.30.590.20 1 359 4.7E-110 T 14-10-2018 Amir_5402 f25558f25fbf0ce4e62e51ef83d54951 363 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 6 283 5.7E-77 T 14-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Amir_1539 639773d384751d68fa7e8277ab00fe89 94 Gene3D G3DSA:3.40.1620.10 5 41 1.6E-6 T 14-10-2018 Amir_1539 639773d384751d68fa7e8277ab00fe89 94 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 7 44 2.5E-9 T 14-10-2018 Amir_1539 639773d384751d68fa7e8277ab00fe89 94 SUPERFAMILY SSF143120 6 45 6.54E-8 T 14-10-2018 IPR036165 YefM-like superfamily Amir_1539 639773d384751d68fa7e8277ab00fe89 94 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 6 42 1.2E-7 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Amir_3496 6a9e02f841b2a5cb704b222cab9072a5 123 SMART SM00422 29 97 6.5E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3496 6a9e02f841b2a5cb704b222cab9072a5 123 Gene3D G3DSA:1.10.1660.10 21 98 2.2E-13 T 14-10-2018 Amir_3496 6a9e02f841b2a5cb704b222cab9072a5 123 Pfam PF13411 MerR HTH family regulatory protein 29 91 3.0E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3496 6a9e02f841b2a5cb704b222cab9072a5 123 SUPERFAMILY SSF46955 29 98 2.29E-11 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_4697 3fa9a5c68712488fef5c07ae1bfcb49f 135 Pfam PF12680 SnoaL-like domain 22 123 1.5E-10 T 14-10-2018 IPR037401 SnoaL-like domain Amir_4697 3fa9a5c68712488fef5c07ae1bfcb49f 135 SUPERFAMILY SSF54427 16 131 2.43E-25 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_4697 3fa9a5c68712488fef5c07ae1bfcb49f 135 Gene3D G3DSA:3.10.450.50 13 134 6.6E-31 T 14-10-2018 Amir_4473 ddbb985f20b6ca44244763e7e69e556b 225 Pfam PF00881 Nitroreductase family 13 200 4.6E-28 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amir_4473 ddbb985f20b6ca44244763e7e69e556b 225 SUPERFAMILY SSF55469 11 224 1.83E-36 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_4473 ddbb985f20b6ca44244763e7e69e556b 225 Gene3D G3DSA:3.40.109.10 6 221 1.8E-60 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_5258 c80ac005d64a4c4525cea3964ebd0b5c 78 SUPERFAMILY SSF55604 5 77 1.44E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Amir_5258 c80ac005d64a4c4525cea3964ebd0b5c 78 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 3 64 1.1E-18 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 Amir_5258 c80ac005d64a4c4525cea3964ebd0b5c 78 Gene3D G3DSA:3.30.1360.60 1 78 1.3E-28 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Amir_5258 c80ac005d64a4c4525cea3964ebd0b5c 78 Pfam PF00367 phosphotransferase system, EIIB 9 40 7.1E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Amir_2690 ddfe8c3125a8949b52ce1a625b2baefb 308 Gene3D G3DSA:3.40.366.10 178 306 1.6E-10 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_2690 ddfe8c3125a8949b52ce1a625b2baefb 308 Gene3D G3DSA:3.40.366.10 4 160 1.2E-15 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amir_2690 ddfe8c3125a8949b52ce1a625b2baefb 308 SUPERFAMILY SSF52151 5 276 7.06E-26 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_3834 d414c8870bffdbca01e801691d576aaf 378 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 34 370 1.4E-89 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Amir_3834 d414c8870bffdbca01e801691d576aaf 378 SUPERFAMILY SSF53383 6 373 6.25E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_3834 d414c8870bffdbca01e801691d576aaf 378 Gene3D G3DSA:3.40.640.10 1 250 3.1E-68 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_3834 d414c8870bffdbca01e801691d576aaf 378 PIRSF PIRSF000390 4 377 6.5E-82 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Amir_3834 d414c8870bffdbca01e801691d576aaf 378 Gene3D G3DSA:3.90.1150.10 254 376 1.2E-27 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_3200 bc3f8c688c66a2d2cc8a3c48591f47cb 341 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.2E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3200 bc3f8c688c66a2d2cc8a3c48591f47cb 341 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.2E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3200 bc3f8c688c66a2d2cc8a3c48591f47cb 341 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.2E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3200 bc3f8c688c66a2d2cc8a3c48591f47cb 341 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.2E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3200 bc3f8c688c66a2d2cc8a3c48591f47cb 341 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.2E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3200 bc3f8c688c66a2d2cc8a3c48591f47cb 341 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3200 bc3f8c688c66a2d2cc8a3c48591f47cb 341 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3200 bc3f8c688c66a2d2cc8a3c48591f47cb 341 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3200 bc3f8c688c66a2d2cc8a3c48591f47cb 341 Gene3D G3DSA:3.40.50.720 1 266 2.0E-70 T 14-10-2018 Amir_3200 bc3f8c688c66a2d2cc8a3c48591f47cb 341 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 194 6.2E-4 T 14-10-2018 Amir_3200 bc3f8c688c66a2d2cc8a3c48591f47cb 341 SUPERFAMILY SSF51735 2 260 4.72E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3200 bc3f8c688c66a2d2cc8a3c48591f47cb 341 Pfam PF00106 short chain dehydrogenase 8 198 2.1E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3200 bc3f8c688c66a2d2cc8a3c48591f47cb 341 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_2288 0f80c89de073031309d5ac1e8d03e692 163 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 11 151 2.4E-20 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like Amir_2288 0f80c89de073031309d5ac1e8d03e692 163 Gene3D G3DSA:3.30.530.20 2 155 2.6E-32 T 14-10-2018 IPR023393 START-like domain superfamily Amir_2288 0f80c89de073031309d5ac1e8d03e692 163 SUPERFAMILY SSF55961 1 152 1.85E-31 T 14-10-2018 Amir_4661 91f7557adc54d89410fbfd389654e0d3 330 Pfam PF07859 alpha/beta hydrolase fold 88 294 4.2E-69 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 Amir_4661 91f7557adc54d89410fbfd389654e0d3 330 SUPERFAMILY SSF53474 69 318 5.92E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4661 91f7557adc54d89410fbfd389654e0d3 330 Gene3D G3DSA:3.40.50.1820 8 322 6.6E-88 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0520 31febedf9412a9776d49f7931de8e624 652 Gene3D G3DSA:3.40.50.300 405 650 2.0E-82 T 14-10-2018 Amir_0520 31febedf9412a9776d49f7931de8e624 652 SUPERFAMILY SSF52540 401 646 9.97E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0520 31febedf9412a9776d49f7931de8e624 652 Pfam PF00664 ABC transporter transmembrane region 93 361 3.0E-39 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_0520 31febedf9412a9776d49f7931de8e624 652 Pfam PF00005 ABC transporter 431 577 5.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0520 31febedf9412a9776d49f7931de8e624 652 ProSitePatterns PS00211 ABC transporters family signature. 549 563 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0520 31febedf9412a9776d49f7931de8e624 652 SMART SM00382 437 623 5.2E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0520 31febedf9412a9776d49f7931de8e624 652 Gene3D G3DSA:1.20.1560.10 61 398 3.9E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_0520 31febedf9412a9776d49f7931de8e624 652 SUPERFAMILY SSF90123 79 401 4.97E-71 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_4115 ec091967bcc39c1bdbd35832fe939e85 517 Pfam PF00501 AMP-binding enzyme 21 424 3.3E-98 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4115 ec091967bcc39c1bdbd35832fe939e85 517 Gene3D G3DSA:3.40.50.12780 6 420 7.3E-120 T 14-10-2018 Amir_4115 ec091967bcc39c1bdbd35832fe939e85 517 SUPERFAMILY SSF56801 13 516 4.06E-146 T 14-10-2018 Amir_4115 ec091967bcc39c1bdbd35832fe939e85 517 Gene3D G3DSA:3.30.300.310 421 517 1.4E-31 T 14-10-2018 Amir_4115 ec091967bcc39c1bdbd35832fe939e85 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 433 506 3.3E-21 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_4115 ec091967bcc39c1bdbd35832fe939e85 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_5751 9c603d1ba8a56328d6eab0d974065d4d 187 SUPERFAMILY SSF55729 1 183 2.3E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_5751 9c603d1ba8a56328d6eab0d974065d4d 187 Gene3D G3DSA:3.40.630.30 1 186 1.2E-29 T 14-10-2018 Amir_5751 9c603d1ba8a56328d6eab0d974065d4d 187 Pfam PF13508 Acetyltransferase (GNAT) domain 64 163 1.8E-7 T 14-10-2018 IPR000182 GNAT domain Amir_1368 e5f53d0107208b2e12cf5558e504aa38 138 PIRSF PIRSF017385 1 138 1.4E-50 T 14-10-2018 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria GO:0004129|GO:0016021|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Amir_1368 e5f53d0107208b2e12cf5558e504aa38 138 Pfam PF12270 Cytochrome c oxidase subunit IV 1 136 1.1E-52 T 14-10-2018 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria GO:0004129|GO:0016021|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Amir_5492 140a2aaf96f309913e21536283fb543d 296 SUPERFAMILY SSF55961 5 143 2.03E-32 T 14-10-2018 Amir_5492 140a2aaf96f309913e21536283fb543d 296 SUPERFAMILY SSF55961 165 291 2.75E-13 T 14-10-2018 Amir_5492 140a2aaf96f309913e21536283fb543d 296 Gene3D G3DSA:3.30.530.20 1 153 1.6E-33 T 14-10-2018 IPR023393 START-like domain superfamily Amir_5492 140a2aaf96f309913e21536283fb543d 296 Gene3D G3DSA:3.30.530.20 155 294 2.3E-11 T 14-10-2018 IPR023393 START-like domain superfamily Amir_5492 140a2aaf96f309913e21536283fb543d 296 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 23 131 5.6E-13 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like Amir_3377 38507f9d650151310d09ded80f925330 215 SUPERFAMILY SSF50129 1 73 1.35E-20 T 14-10-2018 IPR011032 GroES-like superfamily Amir_3377 38507f9d650151310d09ded80f925330 215 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 12 71 1.2E-15 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_3377 38507f9d650151310d09ded80f925330 215 Gene3D G3DSA:3.40.50.720 67 202 2.4E-9 T 14-10-2018 Amir_3377 38507f9d650151310d09ded80f925330 215 Gene3D G3DSA:3.90.180.10 12 62 2.2E-11 T 14-10-2018 Amir_3377 38507f9d650151310d09ded80f925330 215 SUPERFAMILY SSF51735 35 182 2.21E-11 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3377 38507f9d650151310d09ded80f925330 215 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 18 4.2E-6 T 14-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated Amir_1268 341117abcf0880f5c4193b2dd0fddf9b 211 SUPERFAMILY SSF53056 18 187 1.31E-48 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Amir_1268 341117abcf0880f5c4193b2dd0fddf9b 211 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 38 45 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Amir_1268 341117abcf0880f5c4193b2dd0fddf9b 211 Gene3D G3DSA:3.40.1050.10 3 193 4.1E-53 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Amir_1268 341117abcf0880f5c4193b2dd0fddf9b 211 SMART SM00947 26 186 6.3E-54 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Amir_1268 341117abcf0880f5c4193b2dd0fddf9b 211 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Amir_1268 341117abcf0880f5c4193b2dd0fddf9b 211 Pfam PF00484 Carbonic anhydrase 34 181 3.4E-40 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Amir_4269 d7c2d1ca03d0960663584ea209863eef 256 Gene3D G3DSA:3.60.160.10 39 249 7.1E-30 T 14-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily Amir_4269 d7c2d1ca03d0960663584ea209863eef 256 SUPERFAMILY SSF51219 52 249 1.8E-45 T 14-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily Amir_4269 d7c2d1ca03d0960663584ea209863eef 256 Pfam PF01987 Mitochondrial biogenesis AIM24 50 245 4.8E-31 T 14-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 Amir_3758 b18ac325d24db83878d6c91c0fa41c88 280 SUPERFAMILY SSF53474 75 251 1.47E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3758 b18ac325d24db83878d6c91c0fa41c88 280 Gene3D G3DSA:3.40.50.1820 94 250 1.6E-11 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3758 b18ac325d24db83878d6c91c0fa41c88 280 Pfam PF12695 Alpha/beta hydrolase family 109 265 1.7E-34 T 14-10-2018 IPR029059 Alpha/beta hydrolase fold-5 Amir_4112 7eef40f54fe5a124391d8b05ffaa2084 667 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 156 231 4.4E-6 T 14-10-2018 Amir_4112 7eef40f54fe5a124391d8b05ffaa2084 667 Pfam PF07593 ASPIC and UnbV 584 640 9.2E-12 T 14-10-2018 IPR011519 ASPIC/UnbV Amir_4112 7eef40f54fe5a124391d8b05ffaa2084 667 SUPERFAMILY SSF69318 79 553 1.31E-43 T 14-10-2018 Amir_1786 b9035e4a0632979a79092c2b4d807c02 335 Gene3D G3DSA:1.10.3720.10 84 333 1.5E-64 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1786 b9035e4a0632979a79092c2b4d807c02 335 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 329 4.7E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_1786 b9035e4a0632979a79092c2b4d807c02 335 SUPERFAMILY SSF161098 88 318 1.57E-57 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4900 b3808667db84a2d62e988f8f736b985c 222 SUPERFAMILY SSF160631 2 111 1.44E-11 T 14-10-2018 Amir_1339 2ae47399113dbb9bf8d579b4ff884f5e 343 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 118 7.0E-11 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 Amir_1339 2ae47399113dbb9bf8d579b4ff884f5e 343 Gene3D G3DSA:3.40.50.720 4 142 3.4E-25 T 14-10-2018 Amir_1339 2ae47399113dbb9bf8d579b4ff884f5e 343 SUPERFAMILY SSF51735 1 140 4.28E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4328 ffe615095cee50ff189091fb6222c7c1 171 SUPERFAMILY SSF55961 23 167 5.75E-18 T 14-10-2018 Amir_4328 ffe615095cee50ff189091fb6222c7c1 171 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 23 156 7.1E-16 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase Amir_4328 ffe615095cee50ff189091fb6222c7c1 171 Gene3D G3DSA:3.30.530.20 19 169 1.8E-31 T 14-10-2018 IPR023393 START-like domain superfamily Amir_4838 8f9785c159ee06e4c0c2fa3094fc9955 304 SUPERFAMILY SSF51735 10 274 1.94E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4838 8f9785c159ee06e4c0c2fa3094fc9955 304 Gene3D G3DSA:3.40.50.720 12 261 2.9E-56 T 14-10-2018 Amir_4838 8f9785c159ee06e4c0c2fa3094fc9955 304 Gene3D G3DSA:3.90.25.10 128 263 2.9E-56 T 14-10-2018 Amir_4838 8f9785c159ee06e4c0c2fa3094fc9955 304 Pfam PF05368 NmrA-like family 124 214 2.4E-6 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 Amir_4838 8f9785c159ee06e4c0c2fa3094fc9955 304 Pfam PF13460 NAD(P)H-binding 15 102 2.1E-6 T 14-10-2018 IPR016040 NAD(P)-binding domain Amir_4837 ba0a6921731a065569ea55c4fda80474 196 SUPERFAMILY SSF46689 6 77 6.98E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4837 ba0a6921731a065569ea55c4fda80474 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 63 7.1E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4837 ba0a6921731a065569ea55c4fda80474 196 Gene3D G3DSA:1.10.357.10 2 194 1.7E-27 T 14-10-2018 Amir_5598 5dfe2b10dbf289e1e8fcaea8eb98aa91 165 SUPERFAMILY SSF55811 14 148 1.9E-30 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_5598 5dfe2b10dbf289e1e8fcaea8eb98aa91 165 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_5598 5dfe2b10dbf289e1e8fcaea8eb98aa91 165 Gene3D G3DSA:3.90.79.10 2 150 3.3E-38 T 14-10-2018 Amir_5598 5dfe2b10dbf289e1e8fcaea8eb98aa91 165 PRINTS PR00502 NUDIX hydrolase family signature 59 74 7.2E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_5598 5dfe2b10dbf289e1e8fcaea8eb98aa91 165 PRINTS PR00502 NUDIX hydrolase family signature 45 59 7.2E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_5598 5dfe2b10dbf289e1e8fcaea8eb98aa91 165 Pfam PF00293 NUDIX domain 18 135 1.7E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_6682 23caf24bbf91b918757eebac5a38aaed 121 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 21 120 2.4E-30 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6682 23caf24bbf91b918757eebac5a38aaed 121 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 121 17.321 T 14-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 Amir_6682 23caf24bbf91b918757eebac5a38aaed 121 Gene3D G3DSA:1.20.58.1610 1 121 1.4E-35 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_4641 e4e9ed7480ee5463a53a7c871b14a4ce 230 Gene3D G3DSA:3.40.390.10 98 223 2.7E-5 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Amir_4641 e4e9ed7480ee5463a53a7c871b14a4ce 230 SUPERFAMILY SSF55486 157 222 2.1E-6 T 14-10-2018 Amir_4672 3146514b2665f92016d596c6a1c26c25 214 SUPERFAMILY SSF55166 59 213 2.39E-28 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amir_4672 3146514b2665f92016d596c6a1c26c25 214 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 133 213 1.0E-23 T 14-10-2018 IPR039561 Peptidase M15C GO:0008233 Amir_4672 3146514b2665f92016d596c6a1c26c25 214 Gene3D G3DSA:3.30.1380.10 72 213 7.3E-18 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amir_4499 87f6fee3a0cafeadb049ead23520b7d6 348 PIRSF PIRSF017617 1 348 4.8E-119 T 14-10-2018 IPR023603 Threonine aldolase Amir_4499 87f6fee3a0cafeadb049ead23520b7d6 348 Pfam PF01212 Beta-eliminating lyase 4 288 2.0E-81 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 Amir_4499 87f6fee3a0cafeadb049ead23520b7d6 348 SUPERFAMILY SSF53383 2 343 1.03E-103 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_4499 87f6fee3a0cafeadb049ead23520b7d6 348 Gene3D G3DSA:3.90.1150.10 250 344 5.0E-25 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_4499 87f6fee3a0cafeadb049ead23520b7d6 348 Gene3D G3DSA:3.40.640.10 1 249 5.7E-87 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_3813 12dfe8ba71ce9c5d19c351ee2f5629f6 523 Gene3D G3DSA:3.50.50.60 228 451 2.0E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3813 12dfe8ba71ce9c5d19c351ee2f5629f6 523 SUPERFAMILY SSF51905 26 478 1.13E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3813 12dfe8ba71ce9c5d19c351ee2f5629f6 523 Pfam PF01593 Flavin containing amine oxidoreductase 33 474 4.7E-30 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Amir_3813 12dfe8ba71ce9c5d19c351ee2f5629f6 523 Gene3D G3DSA:3.90.660.50 147 426 2.0E-11 T 14-10-2018 Amir_3813 12dfe8ba71ce9c5d19c351ee2f5629f6 523 Gene3D G3DSA:3.50.50.60 22 106 5.2E-12 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_7097 650c82767c274cdaab8de5c6ac418d9c 358 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 32 250 2.0E-56 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_7097 650c82767c274cdaab8de5c6ac418d9c 358 Pfam PF02096 60Kd inner membrane protein 32 251 5.5E-51 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Amir_0889 5142175817b438fbf9b5ff24d9973b00 337 Pfam PF00877 NlpC/P60 family 226 326 5.7E-22 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Amir_0889 5142175817b438fbf9b5ff24d9973b00 337 SUPERFAMILY SSF54001 211 325 2.84E-32 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amir_0889 5142175817b438fbf9b5ff24d9973b00 337 Gene3D G3DSA:3.90.1720.10 158 333 1.1E-37 T 14-10-2018 Amir_1026 b021ba5eaf7971c710b5cef781517a18 352 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 292 2.2E-8 T 14-10-2018 Amir_1026 b021ba5eaf7971c710b5cef781517a18 352 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 2.2E-8 T 14-10-2018 Amir_1026 b021ba5eaf7971c710b5cef781517a18 352 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 2.2E-8 T 14-10-2018 Amir_1026 b021ba5eaf7971c710b5cef781517a18 352 SUPERFAMILY SSF51905 9 346 1.07E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_1026 b021ba5eaf7971c710b5cef781517a18 352 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 11 225 3.4E-25 T 14-10-2018 Amir_1026 b021ba5eaf7971c710b5cef781517a18 352 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 164 188 1.8E-14 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_1026 b021ba5eaf7971c710b5cef781517a18 352 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 1.8E-14 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_1026 b021ba5eaf7971c710b5cef781517a18 352 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 125 133 1.8E-14 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_1026 b021ba5eaf7971c710b5cef781517a18 352 Gene3D G3DSA:3.50.50.60 3 349 4.7E-110 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2616 39c80a5ca9ab7c73e79dcffa8ec4006c 540 Pfam PF00005 ABC transporter 39 204 1.1E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2616 39c80a5ca9ab7c73e79dcffa8ec4006c 540 SMART SM00382 381 538 4.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2616 39c80a5ca9ab7c73e79dcffa8ec4006c 540 SMART SM00382 48 249 3.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2616 39c80a5ca9ab7c73e79dcffa8ec4006c 540 SUPERFAMILY SSF52540 375 534 1.08E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2616 39c80a5ca9ab7c73e79dcffa8ec4006c 540 Pfam PF00005 ABC transporter 375 497 3.6E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_2616 39c80a5ca9ab7c73e79dcffa8ec4006c 540 Gene3D G3DSA:3.40.50.300 27 300 2.3E-42 T 14-10-2018 Amir_2616 39c80a5ca9ab7c73e79dcffa8ec4006c 540 Gene3D G3DSA:3.40.50.300 373 442 6.2E-11 T 14-10-2018 Amir_2616 39c80a5ca9ab7c73e79dcffa8ec4006c 540 Gene3D G3DSA:3.40.50.300 443 535 1.6E-19 T 14-10-2018 Amir_2616 39c80a5ca9ab7c73e79dcffa8ec4006c 540 SUPERFAMILY SSF52540 21 247 2.91E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1547 5d526f3c691f6be9be2725b86bf3ef2e 239 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.7E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_1547 5d526f3c691f6be9be2725b86bf3ef2e 239 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.7E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_1547 5d526f3c691f6be9be2725b86bf3ef2e 239 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.7E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_1547 5d526f3c691f6be9be2725b86bf3ef2e 239 SUPERFAMILY SSF46955 1 85 3.11E-16 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_1547 5d526f3c691f6be9be2725b86bf3ef2e 239 SMART SM00422 1 71 1.9E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_1547 5d526f3c691f6be9be2725b86bf3ef2e 239 Gene3D G3DSA:1.10.1660.10 2 216 1.9E-51 T 14-10-2018 Amir_1547 5d526f3c691f6be9be2725b86bf3ef2e 239 Pfam PF13411 MerR HTH family regulatory protein 1 70 1.4E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_2459 baab0193edb458b3c0aa6f2669526a10 308 SUPERFAMILY SSF161098 98 286 6.15E-26 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2459 baab0193edb458b3c0aa6f2669526a10 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 304 3.1E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_2459 baab0193edb458b3c0aa6f2669526a10 308 Gene3D G3DSA:1.10.3720.10 92 304 1.4E-23 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2260 5f125c13b53a79f12b014ffa34815968 248 Gene3D G3DSA:3.30.470.10 9 104 1.4E-7 T 14-10-2018 Amir_2260 5f125c13b53a79f12b014ffa34815968 248 Pfam PF01063 Amino-transferase class IV 24 220 6.2E-21 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Amir_2260 5f125c13b53a79f12b014ffa34815968 248 SUPERFAMILY SSF56752 17 233 1.83E-29 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Amir_2260 5f125c13b53a79f12b014ffa34815968 248 Gene3D G3DSA:3.20.10.10 107 245 1.1E-15 T 14-10-2018 Amir_5837 fbf10e3dcfae4298c02f2833cc13a679 174 Pfam PF17384 RimP C-terminal SH3 domain 92 153 7.0E-8 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal Amir_5837 fbf10e3dcfae4298c02f2833cc13a679 174 Gene3D G3DSA:3.30.300.70 7 86 1.4E-14 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily Amir_5837 fbf10e3dcfae4298c02f2833cc13a679 174 Pfam PF02576 RimP N-terminal domain 17 89 1.2E-17 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal Amir_5837 fbf10e3dcfae4298c02f2833cc13a679 174 SUPERFAMILY SSF75420 9 89 1.57E-17 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily Amir_5837 fbf10e3dcfae4298c02f2833cc13a679 174 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 11 153 19.578 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Amir_2468 beeec42d9dca4c628d5833fe9be3ba39 397 SUPERFAMILY SSF103473 5 382 4.45E-47 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2468 beeec42d9dca4c628d5833fe9be3ba39 397 Pfam PF07690 Major Facilitator Superfamily 213 395 4.6E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2468 beeec42d9dca4c628d5833fe9be3ba39 397 Pfam PF07690 Major Facilitator Superfamily 17 196 1.7E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2468 beeec42d9dca4c628d5833fe9be3ba39 397 Gene3D G3DSA:1.20.1250.20 2 382 4.6E-43 T 14-10-2018 Amir_4423 170dd7816a56f94e885cbd4fcd711337 303 Pfam PF00107 Zinc-binding dehydrogenase 143 235 6.7E-12 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_4423 170dd7816a56f94e885cbd4fcd711337 303 Gene3D G3DSA:3.40.50.720 117 246 5.6E-48 T 14-10-2018 Amir_4423 170dd7816a56f94e885cbd4fcd711337 303 SUPERFAMILY SSF50129 2 145 2.52E-20 T 14-10-2018 IPR011032 GroES-like superfamily Amir_4423 170dd7816a56f94e885cbd4fcd711337 303 SMART SM00829 12 300 1.3E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_4423 170dd7816a56f94e885cbd4fcd711337 303 Gene3D G3DSA:3.90.180.10 10 299 5.6E-48 T 14-10-2018 Amir_4423 170dd7816a56f94e885cbd4fcd711337 303 SUPERFAMILY SSF51735 107 271 1.05E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0453 394de0b34d60b5b30b5d718154371ce6 550 Pfam PF04851 Type III restriction enzyme, res subunit 181 326 3.8E-13 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Amir_0453 394de0b34d60b5b30b5d718154371ce6 550 Gene3D G3DSA:3.40.50.300 171 352 3.3E-36 T 14-10-2018 Amir_0453 394de0b34d60b5b30b5d718154371ce6 550 SMART SM00490 423 500 2.0E-9 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_0453 394de0b34d60b5b30b5d718154371ce6 550 SMART SM00487 178 353 4.2E-22 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_0453 394de0b34d60b5b30b5d718154371ce6 550 Gene3D G3DSA:3.40.50.300 353 545 1.8E-45 T 14-10-2018 Amir_0453 394de0b34d60b5b30b5d718154371ce6 550 Pfam PF13625 Helicase conserved C-terminal domain 6 134 1.6E-46 T 14-10-2018 IPR032830 Helicase XPB/Ssl2, N-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 Amir_0453 394de0b34d60b5b30b5d718154371ce6 550 Pfam PF16203 ERCC3/RAD25/XPB C-terminal helicase 353 540 1.1E-44 T 14-10-2018 IPR032438 ERCC3/RAD25/XPB helicase, C-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 Amir_0453 394de0b34d60b5b30b5d718154371ce6 550 SUPERFAMILY SSF52540 140 343 3.36E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0453 394de0b34d60b5b30b5d718154371ce6 550 SUPERFAMILY SSF52540 290 513 1.06E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2620 88ea37475e98f2ca4973e86a1c1a50da 128 Gene3D G3DSA:3.10.180.10 1 128 1.7E-49 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_2620 88ea37475e98f2ca4973e86a1c1a50da 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 124 2.4E-15 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amir_2620 88ea37475e98f2ca4973e86a1c1a50da 128 SUPERFAMILY SSF54593 2 127 6.44E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_6855 b503f7578f687ae2f0b7ca8ea313b6fa 137 SUPERFAMILY SSF75620 6 97 4.71E-9 T 14-10-2018 Amir_6855 b503f7578f687ae2f0b7ca8ea313b6fa 137 Gene3D G3DSA:3.30.160.20 1 133 1.1E-31 T 14-10-2018 Amir_6855 b503f7578f687ae2f0b7ca8ea313b6fa 137 Pfam PF00472 RF-1 domain 6 130 3.5E-20 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Amir_4819 c24ee4aaf22adeb45436f7b1e3b10f41 239 SUPERFAMILY SSF51182 15 136 4.77E-15 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_4819 c24ee4aaf22adeb45436f7b1e3b10f41 239 Pfam PF07883 Cupin domain 18 87 2.0E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Amir_4819 c24ee4aaf22adeb45436f7b1e3b10f41 239 Gene3D G3DSA:2.60.120.10 6 129 2.6E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_6000 c342fdb9fef68d6bf5a4fd141d07a78e 204 TIGRFAM TIGR03552 F420_cofC: 2-phospho-L-lactate guanylyltransferase 7 190 1.3E-42 T 14-10-2018 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198 Amir_6000 c342fdb9fef68d6bf5a4fd141d07a78e 204 Hamap MF_02114 2-phospho-L-lactate guanylyltransferase [cofC]. 5 201 20.854 T 14-10-2018 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198 Amir_6000 c342fdb9fef68d6bf5a4fd141d07a78e 204 SUPERFAMILY SSF53448 8 193 9.14E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_6000 c342fdb9fef68d6bf5a4fd141d07a78e 204 Gene3D G3DSA:3.90.550.10 3 166 1.4E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_6000 c342fdb9fef68d6bf5a4fd141d07a78e 204 Pfam PF01983 Guanylyl transferase CofC like 7 152 7.7E-6 T 14-10-2018 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198 Amir_5358 6906213caeca0fed6213756dcd57951d 203 Pfam PF01066 CDP-alcohol phosphatidyltransferase 18 82 8.0E-14 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amir_5358 6906213caeca0fed6213756dcd57951d 203 Gene3D G3DSA:1.20.120.1760 14 196 1.7E-9 T 14-10-2018 Amir_5358 6906213caeca0fed6213756dcd57951d 203 PIRSF PIRSF000847 13 198 7.9E-40 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Amir_5358 6906213caeca0fed6213756dcd57951d 203 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 60 82 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amir_3918 e0ac8dffb3655f2daa1c95660ef853c1 432 Pfam PF10100 Staphylopine dehydrogenase 5 428 2.6E-193 T 14-10-2018 IPR016935 Staphylopine dehydrogenase Amir_5792 b17bfeaf95faf91034426cd385da5d93 216 SUPERFAMILY SSF46689 6 88 3.69E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5792 b17bfeaf95faf91034426cd385da5d93 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 3.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5792 b17bfeaf95faf91034426cd385da5d93 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 3.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5792 b17bfeaf95faf91034426cd385da5d93 216 Gene3D G3DSA:1.10.357.10 1 195 9.1E-45 T 14-10-2018 Amir_5792 b17bfeaf95faf91034426cd385da5d93 216 SUPERFAMILY SSF48498 84 191 5.12E-22 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_5792 b17bfeaf95faf91034426cd385da5d93 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 64 9.1E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4858 17f00328778904482374b7394af048b6 432 Gene3D G3DSA:3.40.309.10 198 344 4.0E-35 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_4858 17f00328778904482374b7394af048b6 432 Gene3D G3DSA:3.40.605.10 82 196 4.0E-35 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_4858 17f00328778904482374b7394af048b6 432 Pfam PF00171 Aldehyde dehydrogenase family 161 342 1.3E-28 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_4858 17f00328778904482374b7394af048b6 432 SUPERFAMILY SSF53720 38 392 5.76E-37 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_5288 92fd3e825bc4d44b1d98024501bec0f6 610 SUPERFAMILY SSF52540 2 373 1.07E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5288 92fd3e825bc4d44b1d98024501bec0f6 610 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 318 364 1.1E-6 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amir_5288 92fd3e825bc4d44b1d98024501bec0f6 610 Gene3D G3DSA:3.40.50.300 187 384 1.4E-9 T 14-10-2018 Amir_5288 92fd3e825bc4d44b1d98024501bec0f6 610 Gene3D G3DSA:3.40.50.300 2 159 2.2E-7 T 14-10-2018 Amir_2899 f60be8b43d5d391c8aecf27a3e77b359 482 SUPERFAMILY SSF51338 6 425 6.35E-23 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_2899 f60be8b43d5d391c8aecf27a3e77b359 482 SUPERFAMILY SSF51556 61 373 1.12E-55 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_2899 f60be8b43d5d391c8aecf27a3e77b359 482 Gene3D G3DSA:3.20.20.140 63 428 4.6E-98 T 14-10-2018 Amir_2899 f60be8b43d5d391c8aecf27a3e77b359 482 Gene3D G3DSA:2.30.40.10 18 427 4.6E-98 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_2899 f60be8b43d5d391c8aecf27a3e77b359 482 Pfam PF01979 Amidohydrolase family 58 421 8.0E-27 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_0681 c38cf673534a5170f089e20d28f701d4 493 SUPERFAMILY SSF53474 30 476 1.93E-70 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0681 c38cf673534a5170f089e20d28f701d4 493 Pfam PF00450 Serine carboxypeptidase 70 229 2.1E-9 T 14-10-2018 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 Amir_0681 c38cf673534a5170f089e20d28f701d4 493 Gene3D G3DSA:3.40.50.1820 55 281 1.4E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5431 30c19c51b8bd5add50091423436e11e9 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 6 297 55.768 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Amir_5431 30c19c51b8bd5add50091423436e11e9 299 SUPERFAMILY SSF56349 5 289 2.0E-59 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amir_5431 30c19c51b8bd5add50091423436e11e9 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 92 5.2E-21 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Amir_5431 30c19c51b8bd5add50091423436e11e9 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 297 56.385 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Amir_5431 30c19c51b8bd5add50091423436e11e9 299 Gene3D G3DSA:1.10.443.10 113 291 2.8E-60 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amir_5431 30c19c51b8bd5add50091423436e11e9 299 Pfam PF00589 Phage integrase family 117 281 6.5E-48 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amir_5431 30c19c51b8bd5add50091423436e11e9 299 Gene3D G3DSA:1.10.150.130 6 101 2.1E-21 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Amir_5431 30c19c51b8bd5add50091423436e11e9 299 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 12 297 4.9E-104 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Amir_3412 5da32716a58544da15fefa46991a94e5 258 SUPERFAMILY SSF51695 11 249 6.54E-61 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amir_3412 5da32716a58544da15fefa46991a94e5 258 Gene3D G3DSA:3.20.20.190 12 255 1.0E-68 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amir_3412 5da32716a58544da15fefa46991a94e5 258 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 13 243 9.6E-35 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Amir_4802 0137b4cf31e1f8a44d14db7aaad52be4 508 SUPERFAMILY SSF103473 8 500 1.31E-69 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4802 0137b4cf31e1f8a44d14db7aaad52be4 508 Pfam PF07690 Major Facilitator Superfamily 23 414 3.0E-52 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_4802 0137b4cf31e1f8a44d14db7aaad52be4 508 Gene3D G3DSA:1.20.1250.20 274 503 1.9E-22 T 14-10-2018 Amir_4802 0137b4cf31e1f8a44d14db7aaad52be4 508 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 90 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Amir_4802 0137b4cf31e1f8a44d14db7aaad52be4 508 PRINTS PR01036 Tetracycline resistance protein TetB signature 82 104 3.4E-5 T 14-10-2018 Amir_4802 0137b4cf31e1f8a44d14db7aaad52be4 508 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 3.4E-5 T 14-10-2018 Amir_4802 0137b4cf31e1f8a44d14db7aaad52be4 508 PRINTS PR01036 Tetracycline resistance protein TetB signature 405 424 3.4E-5 T 14-10-2018 Amir_4802 0137b4cf31e1f8a44d14db7aaad52be4 508 Gene3D G3DSA:1.20.1720.10 20 252 2.4E-43 T 14-10-2018 Amir_6684 0c3bd3dbe013311151fcb63cf1f66d77 230 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 4 227 31.59 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Amir_6684 0c3bd3dbe013311151fcb63cf1f66d77 230 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 13 227 4.5E-63 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Amir_6684 0c3bd3dbe013311151fcb63cf1f66d77 230 Gene3D G3DSA:3.40.50.150 19 228 2.0E-49 T 14-10-2018 Amir_6684 0c3bd3dbe013311151fcb63cf1f66d77 230 Pfam PF01209 ubiE/COQ5 methyltransferase family 10 227 7.5E-53 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Amir_6684 0c3bd3dbe013311151fcb63cf1f66d77 230 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 135 149 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Amir_6684 0c3bd3dbe013311151fcb63cf1f66d77 230 SUPERFAMILY SSF53335 6 223 3.41E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_0160 929aef6b54bf206f6ad7e967ee40e1db 404 Gene3D G3DSA:3.90.120.10 266 361 4.6E-23 T 14-10-2018 Amir_0160 929aef6b54bf206f6ad7e967ee40e1db 404 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 8 362 2.5E-32 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Amir_0160 929aef6b54bf206f6ad7e967ee40e1db 404 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 173 186 2.5E-15 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Amir_0160 929aef6b54bf206f6ad7e967ee40e1db 404 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 7 23 2.5E-15 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Amir_0160 929aef6b54bf206f6ad7e967ee40e1db 404 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 127 141 2.5E-15 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Amir_0160 929aef6b54bf206f6ad7e967ee40e1db 404 Pfam PF00145 C-5 cytosine-specific DNA methylase 6 365 6.8E-41 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Amir_0160 929aef6b54bf206f6ad7e967ee40e1db 404 SUPERFAMILY SSF53335 6 368 3.13E-60 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_0160 929aef6b54bf206f6ad7e967ee40e1db 404 Gene3D G3DSA:3.40.50.150 2 224 1.2E-36 T 14-10-2018 Amir_6605 f376220e87afea67cb81084d44201a72 93 Pfam PF00366 Ribosomal protein S17 20 87 5.8E-29 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6605 f376220e87afea67cb81084d44201a72 93 ProSitePatterns PS00056 Ribosomal protein S17 signature. 66 78 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6605 f376220e87afea67cb81084d44201a72 93 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 15 86 1.6E-32 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6605 f376220e87afea67cb81084d44201a72 93 PRINTS PR00973 Ribosomal protein S17 family signature 34 57 1.5E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6605 f376220e87afea67cb81084d44201a72 93 PRINTS PR00973 Ribosomal protein S17 family signature 66 76 1.5E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6605 f376220e87afea67cb81084d44201a72 93 PRINTS PR00973 Ribosomal protein S17 family signature 76 83 1.5E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6605 f376220e87afea67cb81084d44201a72 93 Gene3D G3DSA:2.40.50.140 14 93 6.8E-32 T 14-10-2018 Amir_6605 f376220e87afea67cb81084d44201a72 93 SUPERFAMILY SSF50249 15 92 1.11E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_6605 f376220e87afea67cb81084d44201a72 93 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 15 86 1.0E-28 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6605 f376220e87afea67cb81084d44201a72 93 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 15 90 23.449 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_5934 fd4229b2f84261c9426366d99f18b96c 447 Gene3D G3DSA:1.10.3430.10 1 428 9.9E-142 T 14-10-2018 IPR029020 Ammonium/urea transporter Amir_5934 fd4229b2f84261c9426366d99f18b96c 447 Pfam PF00909 Ammonium Transporter Family 7 417 9.2E-128 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Amir_5934 fd4229b2f84261c9426366d99f18b96c 447 TIGRFAM TIGR00836 amt: ammonium transporter 5 417 3.4E-140 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 Amir_5934 fd4229b2f84261c9426366d99f18b96c 447 SUPERFAMILY SSF111352 2 397 4.84E-120 T 14-10-2018 Amir_5934 fd4229b2f84261c9426366d99f18b96c 447 ProSitePatterns PS01219 Ammonium transporters signature. 173 198 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Amir_2512 0bd658b55650136806ad53801e682e0c 1295 Gene3D G3DSA:3.40.50.410 1127 1281 1.6E-7 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_2512 0bd658b55650136806ad53801e682e0c 1295 Pfam PF05762 VWA domain containing CoxE-like protein 1069 1289 8.5E-58 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like Amir_2512 0bd658b55650136806ad53801e682e0c 1295 SUPERFAMILY SSF53300 1130 1280 1.0E-20 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_0987 155b0da83929e4af8f7236242d4f544d 189 SUPERFAMILY SSF51182 1 184 2.99E-29 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_0987 155b0da83929e4af8f7236242d4f544d 189 Gene3D G3DSA:2.60.120.10 2 158 1.3E-38 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_0987 155b0da83929e4af8f7236242d4f544d 189 Pfam PF03079 ARD/ARD' family 9 165 8.0E-25 T 14-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 Amir_0987 155b0da83929e4af8f7236242d4f544d 189 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 173 31.807 T 14-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 Amir_5891 3237183ad92b9d8596716baeb0d791bf 88 Pfam PF04226 Transglycosylase associated protein 33 83 8.5E-11 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 Amir_0712 a4a745acc8afa1f8d1763778ce07c91b 657 Pfam PF03190 Protein of unknown function, DUF255 2 163 2.8E-74 T 14-10-2018 IPR004879 Domain of unknown function DUF255 Amir_0712 a4a745acc8afa1f8d1763778ce07c91b 657 PIRSF PIRSF006402 1 656 1.3E-191 T 14-10-2018 IPR024705 Spermatogenesis-associated protein 20 Amir_0712 a4a745acc8afa1f8d1763778ce07c91b 657 Gene3D G3DSA:3.40.30.10 1 167 2.9E-67 T 14-10-2018 Amir_0712 a4a745acc8afa1f8d1763778ce07c91b 657 SUPERFAMILY SSF48208 189 521 1.81E-69 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_0712 a4a745acc8afa1f8d1763778ce07c91b 657 SUPERFAMILY SSF52833 2 127 3.58E-30 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_4070 58c88dc58701de9cc16b1fafc7883f80 358 Pfam PF01471 Putative peptidoglycan binding domain 129 182 4.9E-6 T 14-10-2018 IPR002477 Peptidoglycan binding-like Amir_4070 58c88dc58701de9cc16b1fafc7883f80 358 SUPERFAMILY SSF47090 119 189 8.48E-8 T 14-10-2018 IPR036365 PGBD-like superfamily Amir_4970 939c6aa5c7c2eedaff27c97589e6fc97 196 SUPERFAMILY SSF53335 2 178 7.57E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_4970 939c6aa5c7c2eedaff27c97589e6fc97 196 Pfam PF13489 Methyltransferase domain 33 140 6.2E-13 T 14-10-2018 Amir_4970 939c6aa5c7c2eedaff27c97589e6fc97 196 Gene3D G3DSA:3.40.50.150 5 193 7.6E-34 T 14-10-2018 Amir_3453 25a9655a5e5d7c5a5c8f81964a662ee3 640 Gene3D G3DSA:2.120.10.30 82 319 2.2E-7 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_3453 25a9655a5e5d7c5a5c8f81964a662ee3 640 SUPERFAMILY SSF53474 366 627 1.93E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3453 25a9655a5e5d7c5a5c8f81964a662ee3 640 Gene3D G3DSA:3.40.50.1820 359 638 2.8E-72 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3453 25a9655a5e5d7c5a5c8f81964a662ee3 640 SUPERFAMILY SSF69322 65 353 1.96E-14 T 14-10-2018 Amir_3453 25a9655a5e5d7c5a5c8f81964a662ee3 640 Pfam PF00326 Prolyl oligopeptidase family 419 627 8.6E-41 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Amir_4812 6a667f327fa46c8b690b1566019fdd7e 446 SUPERFAMILY SSF48264 37 441 3.41E-53 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4812 6a667f327fa46c8b690b1566019fdd7e 446 Gene3D G3DSA:1.10.630.10 44 445 4.7E-75 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_5135 1bb8c40c0796706ca1605cce2a9ec8f6 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.3E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5135 1bb8c40c0796706ca1605cce2a9ec8f6 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.3E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5135 1bb8c40c0796706ca1605cce2a9ec8f6 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.3E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5135 1bb8c40c0796706ca1605cce2a9ec8f6 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5135 1bb8c40c0796706ca1605cce2a9ec8f6 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5135 1bb8c40c0796706ca1605cce2a9ec8f6 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5135 1bb8c40c0796706ca1605cce2a9ec8f6 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5135 1bb8c40c0796706ca1605cce2a9ec8f6 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5135 1bb8c40c0796706ca1605cce2a9ec8f6 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5135 1bb8c40c0796706ca1605cce2a9ec8f6 251 Gene3D G3DSA:3.40.50.720 1 247 1.5E-77 T 14-10-2018 Amir_5135 1bb8c40c0796706ca1605cce2a9ec8f6 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 1.4E-63 T 14-10-2018 Amir_5135 1bb8c40c0796706ca1605cce2a9ec8f6 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_5135 1bb8c40c0796706ca1605cce2a9ec8f6 251 SUPERFAMILY SSF51735 6 246 3.12E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4134 eaa0f1879fda575810a0bb3123349415 536 SMART SM00637 444 533 1.1E-22 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_4134 eaa0f1879fda575810a0bb3123349415 536 SUPERFAMILY SSF49384 438 533 9.07E-22 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_4134 eaa0f1879fda575810a0bb3123349415 536 Gene3D G3DSA:2.60.40.290 440 535 2.1E-21 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_4134 eaa0f1879fda575810a0bb3123349415 536 Gene3D G3DSA:3.40.50.1820 45 413 1.0E-101 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4134 eaa0f1879fda575810a0bb3123349415 536 SUPERFAMILY SSF53474 113 296 3.77E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4134 eaa0f1879fda575810a0bb3123349415 536 Pfam PF00553 Cellulose binding domain 446 530 2.2E-16 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_0548 d8f477b5f5953bf391604664ec7e9e79 272 SUPERFAMILY SSF53850 87 271 7.76E-32 T 14-10-2018 Amir_0548 d8f477b5f5953bf391604664ec7e9e79 272 Gene3D G3DSA:3.40.190.290 187 272 3.8E-10 T 14-10-2018 Amir_0548 d8f477b5f5953bf391604664ec7e9e79 272 Pfam PF03466 LysR substrate binding domain 86 271 1.9E-34 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_0548 d8f477b5f5953bf391604664ec7e9e79 272 Gene3D G3DSA:1.10.10.10 1 84 1.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0548 d8f477b5f5953bf391604664ec7e9e79 272 Gene3D G3DSA:3.40.190.10 85 186 2.9E-15 T 14-10-2018 Amir_0548 d8f477b5f5953bf391604664ec7e9e79 272 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_0548 d8f477b5f5953bf391604664ec7e9e79 272 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_0548 d8f477b5f5953bf391604664ec7e9e79 272 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_0548 d8f477b5f5953bf391604664ec7e9e79 272 SUPERFAMILY SSF46785 1 110 1.78E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0548 d8f477b5f5953bf391604664ec7e9e79 272 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.6E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_5536 52f496c912d5b6c0584b2b08c15fad99 258 SMART SM00382 30 229 5.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5536 52f496c912d5b6c0584b2b08c15fad99 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 252 2.1E-12 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Amir_5536 52f496c912d5b6c0584b2b08c15fad99 258 SUPERFAMILY SSF52540 4 252 9.73E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5536 52f496c912d5b6c0584b2b08c15fad99 258 Pfam PF00005 ABC transporter 22 181 2.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5536 52f496c912d5b6c0584b2b08c15fad99 258 Gene3D G3DSA:3.40.50.300 1 254 8.3E-66 T 14-10-2018 Amir_3237 3234620e892a177b87227c9ee062d60b 128 SUPERFAMILY SSF52091 15 114 5.89E-18 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3237 3234620e892a177b87227c9ee062d60b 128 Gene3D G3DSA:3.30.750.24 4 118 2.6E-24 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3237 3234620e892a177b87227c9ee062d60b 128 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 12 110 2.5E-24 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Amir_3237 3234620e892a177b87227c9ee062d60b 128 Pfam PF13466 STAS domain 23 100 7.0E-11 T 14-10-2018 IPR002645 STAS domain Amir_2400 39aeb4639ac5fd03601be76c9aef38e0 285 TIGRFAM TIGR03619 F420_Rv2161c: probable F420-dependent oxidoreductase, Rv2161c family 23 262 1.1E-54 T 14-10-2018 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted Amir_2400 39aeb4639ac5fd03601be76c9aef38e0 285 Pfam PF00296 Luciferase-like monooxygenase 2 209 5.2E-39 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_2400 39aeb4639ac5fd03601be76c9aef38e0 285 SUPERFAMILY SSF51679 1 230 4.58E-46 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_2400 39aeb4639ac5fd03601be76c9aef38e0 285 Gene3D G3DSA:3.20.20.30 1 284 4.1E-64 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_5445 440bd71987025c6dc6d457dd79e192b1 427 SUPERFAMILY SSF52374 7 328 5.63E-95 T 14-10-2018 Amir_5445 440bd71987025c6dc6d457dd79e192b1 427 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 209 4.6E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Amir_5445 440bd71987025c6dc6d457dd79e192b1 427 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 48 70 4.6E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Amir_5445 440bd71987025c6dc6d457dd79e192b1 427 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 166 181 4.6E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Amir_5445 440bd71987025c6dc6d457dd79e192b1 427 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 220 232 4.6E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Amir_5445 440bd71987025c6dc6d457dd79e192b1 427 Gene3D G3DSA:3.10.290.10 332 426 9.6E-29 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amir_5445 440bd71987025c6dc6d457dd79e192b1 427 Gene3D G3DSA:1.10.240.10 227 331 1.8E-32 T 14-10-2018 Amir_5445 440bd71987025c6dc6d457dd79e192b1 427 SUPERFAMILY SSF55174 331 424 5.18E-16 T 14-10-2018 Amir_5445 440bd71987025c6dc6d457dd79e192b1 427 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 7 425 1.3E-106 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Amir_5445 440bd71987025c6dc6d457dd79e192b1 427 Gene3D G3DSA:3.40.50.620 4 226 9.8E-84 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_5445 440bd71987025c6dc6d457dd79e192b1 427 Pfam PF00579 tRNA synthetases class I (W and Y) 34 328 2.2E-77 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_5445 440bd71987025c6dc6d457dd79e192b1 427 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 54 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_5445 440bd71987025c6dc6d457dd79e192b1 427 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 6 425 42.595 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 Amir_0645 7629368c5136abdaa27f09430ff39a3d 298 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 34 296 48.704 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Amir_0645 7629368c5136abdaa27f09430ff39a3d 298 SMART SM00650 50 225 3.4E-67 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Amir_0645 7629368c5136abdaa27f09430ff39a3d 298 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 34 293 8.2E-74 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Amir_0645 7629368c5136abdaa27f09430ff39a3d 298 Gene3D G3DSA:1.10.8.100 233 296 2.1E-18 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Amir_0645 7629368c5136abdaa27f09430ff39a3d 298 Pfam PF00398 Ribosomal RNA adenine dimethylase 38 293 1.0E-47 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Amir_0645 7629368c5136abdaa27f09430ff39a3d 298 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 66 93 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Amir_0645 7629368c5136abdaa27f09430ff39a3d 298 Gene3D G3DSA:3.40.50.150 13 229 9.0E-60 T 14-10-2018 Amir_0645 7629368c5136abdaa27f09430ff39a3d 298 SUPERFAMILY SSF53335 34 294 1.75E-64 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_2390 37c06df5e42fe14904aea0dbc36a9d08 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.9E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2390 37c06df5e42fe14904aea0dbc36a9d08 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.9E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2390 37c06df5e42fe14904aea0dbc36a9d08 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.9E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2390 37c06df5e42fe14904aea0dbc36a9d08 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.9E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2390 37c06df5e42fe14904aea0dbc36a9d08 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.9E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2390 37c06df5e42fe14904aea0dbc36a9d08 236 SUPERFAMILY SSF51735 4 233 9.12E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2390 37c06df5e42fe14904aea0dbc36a9d08 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 5.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2390 37c06df5e42fe14904aea0dbc36a9d08 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2390 37c06df5e42fe14904aea0dbc36a9d08 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 5.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2390 37c06df5e42fe14904aea0dbc36a9d08 236 Gene3D G3DSA:3.40.50.720 1 236 1.5E-59 T 14-10-2018 Amir_2390 37c06df5e42fe14904aea0dbc36a9d08 236 Pfam PF00106 short chain dehydrogenase 5 197 1.5E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3709 7b527231b231b47254417954f659f61f 325 Gene3D G3DSA:3.20.20.30 7 325 3.2E-55 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_3709 7b527231b231b47254417954f659f61f 325 TIGRFAM TIGR03885 flavin_revert: probable non-F420 flavinoid oxidoreductase 11 322 5.8E-143 T 14-10-2018 IPR023907 Non-F420 flavinoid oxidoreductase Amir_3709 7b527231b231b47254417954f659f61f 325 Pfam PF00296 Luciferase-like monooxygenase 12 297 4.2E-44 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_3709 7b527231b231b47254417954f659f61f 325 SUPERFAMILY SSF51679 10 323 2.62E-49 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_3709 7b527231b231b47254417954f659f61f 325 TIGRFAM TIGR03557 F420_G6P_family: F420-dependent oxidoreductase, G6PDH family 11 324 5.4E-86 T 14-10-2018 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related Amir_3082 1085ee32a029ae34aa805dff12855569 376 SUPERFAMILY SSF140453 106 182 3.4E-5 T 14-10-2018 IPR036689 ESAT-6-like superfamily Amir_3082 1085ee32a029ae34aa805dff12855569 376 Gene3D G3DSA:1.10.287.1060 105 187 6.1E-5 T 14-10-2018 Amir_2095 5628ace5f18def1f258f8cd1736c07f9 327 ProSitePatterns PS00893 Nudix box signature. 207 228 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_2095 5628ace5f18def1f258f8cd1736c07f9 327 SUPERFAMILY SSF55811 166 300 6.77E-20 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_2095 5628ace5f18def1f258f8cd1736c07f9 327 Gene3D G3DSA:3.90.79.10 163 303 3.7E-22 T 14-10-2018 Amir_2095 5628ace5f18def1f258f8cd1736c07f9 327 Pfam PF00293 NUDIX domain 171 295 1.6E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_4395 73520ed96357e6d5c899fcc891a76d4c 196 Gene3D G3DSA:1.10.357.10 2 195 8.3E-62 T 14-10-2018 Amir_4395 73520ed96357e6d5c899fcc891a76d4c 196 SUPERFAMILY SSF46689 4 85 1.8E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4395 73520ed96357e6d5c899fcc891a76d4c 196 SUPERFAMILY SSF48498 81 194 8.9E-25 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4395 73520ed96357e6d5c899fcc891a76d4c 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 4.1E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4395 73520ed96357e6d5c899fcc891a76d4c 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4395 73520ed96357e6d5c899fcc891a76d4c 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4395 73520ed96357e6d5c899fcc891a76d4c 196 Pfam PF16925 Bacterial transcriptional repressor C-terminal 84 187 3.3E-9 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Amir_0340 bf263dbaa2f07395d9bd762ebba4889e 492 Gene3D G3DSA:2.60.40.1730 70 254 1.4E-23 T 14-10-2018 Amir_0340 bf263dbaa2f07395d9bd762ebba4889e 492 Gene3D G3DSA:1.10.390.60 270 476 1.2E-27 T 14-10-2018 Amir_0340 bf263dbaa2f07395d9bd762ebba4889e 492 Pfam PF01433 Peptidase family M1 domain 334 473 8.7E-21 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amir_0340 bf263dbaa2f07395d9bd762ebba4889e 492 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 354 366 6.6E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amir_0340 bf263dbaa2f07395d9bd762ebba4889e 492 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 335 350 6.6E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amir_0340 bf263dbaa2f07395d9bd762ebba4889e 492 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 191 206 6.6E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amir_0340 bf263dbaa2f07395d9bd762ebba4889e 492 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 238 253 6.6E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amir_0340 bf263dbaa2f07395d9bd762ebba4889e 492 SUPERFAMILY SSF55486 278 480 1.63E-38 T 14-10-2018 Amir_0340 bf263dbaa2f07395d9bd762ebba4889e 492 SUPERFAMILY SSF63737 60 253 9.02E-31 T 14-10-2018 Amir_0152 9f92d72437770c0fee8523168b1b6129 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 268 279 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_0152 9f92d72437770c0fee8523168b1b6129 651 Gene3D G3DSA:3.30.300.30 522 634 2.1E-12 T 14-10-2018 Amir_0152 9f92d72437770c0fee8523168b1b6129 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 47 103 1.5E-12 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Amir_0152 9f92d72437770c0fee8523168b1b6129 651 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 13 642 1.9E-241 T 14-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 Amir_0152 9f92d72437770c0fee8523168b1b6129 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 539 612 7.4E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_0152 9f92d72437770c0fee8523168b1b6129 651 Gene3D G3DSA:3.40.50.12780 92 521 5.9E-65 T 14-10-2018 Amir_0152 9f92d72437770c0fee8523168b1b6129 651 SUPERFAMILY SSF56801 46 624 4.19E-124 T 14-10-2018 Amir_0152 9f92d72437770c0fee8523168b1b6129 651 Pfam PF00501 AMP-binding enzyme 110 524 9.9E-52 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_6201 8622b7cf7663d8e4b789e73a04769982 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 6.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6201 8622b7cf7663d8e4b789e73a04769982 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 6.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6201 8622b7cf7663d8e4b789e73a04769982 189 SUPERFAMILY SSF48498 86 188 5.82E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_6201 8622b7cf7663d8e4b789e73a04769982 189 Gene3D G3DSA:1.10.357.10 2 189 3.8E-54 T 14-10-2018 Amir_6201 8622b7cf7663d8e4b789e73a04769982 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 4.4E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6201 8622b7cf7663d8e4b789e73a04769982 189 SUPERFAMILY SSF46689 7 86 4.08E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_7044 a2c430b8d8ff09dcdb5e4a4120e5391f 124 SUPERFAMILY SSF52091 15 115 1.79E-19 T 14-10-2018 IPR036513 STAS domain superfamily Amir_7044 a2c430b8d8ff09dcdb5e4a4120e5391f 124 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 15 112 2.4E-17 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Amir_7044 a2c430b8d8ff09dcdb5e4a4120e5391f 124 Gene3D G3DSA:3.30.750.24 5 122 4.1E-23 T 14-10-2018 IPR036513 STAS domain superfamily Amir_7044 a2c430b8d8ff09dcdb5e4a4120e5391f 124 Pfam PF01740 STAS domain 50 113 1.1E-10 T 14-10-2018 IPR002645 STAS domain Amir_0251 406548d76820a26ade66a1d8d504eb02 365 SUPERFAMILY SSF55979 1 118 4.08E-16 T 14-10-2018 Amir_0251 406548d76820a26ade66a1d8d504eb02 365 SMART SM00480 17 360 1.0E-27 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Amir_0251 406548d76820a26ade66a1d8d504eb02 365 SUPERFAMILY SSF55979 242 364 1.53E-16 T 14-10-2018 Amir_0251 406548d76820a26ade66a1d8d504eb02 365 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 237 1.6E-13 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Amir_0251 406548d76820a26ade66a1d8d504eb02 365 Gene3D G3DSA:3.10.150.10 1 121 2.2E-23 T 14-10-2018 Amir_0251 406548d76820a26ade66a1d8d504eb02 365 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 117 5.0E-18 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Amir_0251 406548d76820a26ade66a1d8d504eb02 365 Gene3D G3DSA:3.10.150.10 124 240 5.0E-19 T 14-10-2018 Amir_0251 406548d76820a26ade66a1d8d504eb02 365 Gene3D G3DSA:3.10.150.10 244 365 2.6E-19 T 14-10-2018 Amir_0251 406548d76820a26ade66a1d8d504eb02 365 SUPERFAMILY SSF55979 128 238 2.98E-10 T 14-10-2018 Amir_0251 406548d76820a26ade66a1d8d504eb02 365 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 364 1.4E-44 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Amir_0251 406548d76820a26ade66a1d8d504eb02 365 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 242 362 6.9E-16 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Amir_5937 5fc4f09e9d55f337280813856e87de00 569 SUPERFAMILY SSF51338 66 555 7.78E-18 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_5937 5fc4f09e9d55f337280813856e87de00 569 Gene3D G3DSA:3.20.20.140 163 555 2.1E-122 T 14-10-2018 Amir_5937 5fc4f09e9d55f337280813856e87de00 569 Pfam PF01979 Amidohydrolase family 183 550 4.0E-27 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_5937 5fc4f09e9d55f337280813856e87de00 569 SUPERFAMILY SSF51556 187 499 5.05E-95 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_5937 5fc4f09e9d55f337280813856e87de00 569 TIGRFAM TIGR03178 allantoinase: allantoinase 166 557 1.1E-157 T 14-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 Amir_1700 1553ca700fa48ff12ead1935631b0826 234 Pfam PF00753 Metallo-beta-lactamase superfamily 9 201 1.2E-26 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_1700 1553ca700fa48ff12ead1935631b0826 234 Gene3D G3DSA:3.60.15.10 2 223 4.3E-62 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_1700 1553ca700fa48ff12ead1935631b0826 234 SMART SM00849 12 201 2.9E-35 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_1700 1553ca700fa48ff12ead1935631b0826 234 SUPERFAMILY SSF56281 4 218 1.18E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_6782 2bded1f111a7eb7c3b2b0e68fe9e6fee 225 SMART SM00382 29 217 6.3E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6782 2bded1f111a7eb7c3b2b0e68fe9e6fee 225 SUPERFAMILY SSF52540 4 222 3.3E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6782 2bded1f111a7eb7c3b2b0e68fe9e6fee 225 Gene3D G3DSA:3.40.50.300 2 225 1.0E-62 T 14-10-2018 Amir_6782 2bded1f111a7eb7c3b2b0e68fe9e6fee 225 Pfam PF00005 ABC transporter 21 168 3.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3038 d2bc5f41963cc5b9865eba4cc25dc8f7 246 Pfam PF02754 Cysteine-rich domain 6 86 1.7E-16 T 14-10-2018 IPR004017 Cysteine-rich domain Amir_3038 d2bc5f41963cc5b9865eba4cc25dc8f7 246 Pfam PF02754 Cysteine-rich domain 137 221 1.3E-14 T 14-10-2018 IPR004017 Cysteine-rich domain Amir_1750 e2010a9b05547f2867fb525e0bd7595e 451 SUPERFAMILY SSF50974 25 342 9.68E-65 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 Amir_1750 e2010a9b05547f2867fb525e0bd7595e 451 Gene3D G3DSA:2.130.10.10 183 423 2.0E-47 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_1750 e2010a9b05547f2867fb525e0bd7595e 451 Pfam PF10282 Lactonase, 7-bladed beta-propeller 48 321 1.4E-13 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller Amir_1750 e2010a9b05547f2867fb525e0bd7595e 451 Gene3D G3DSA:2.130.10.10 35 182 1.4E-36 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_1750 e2010a9b05547f2867fb525e0bd7595e 451 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 302 342 4.6E-16 T 14-10-2018 IPR011964 YVTN beta-propeller repeat Amir_1750 e2010a9b05547f2867fb525e0bd7595e 451 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 128 160 3.3E-10 T 14-10-2018 IPR011964 YVTN beta-propeller repeat Amir_1750 e2010a9b05547f2867fb525e0bd7595e 451 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 261 300 2.9E-9 T 14-10-2018 IPR011964 YVTN beta-propeller repeat Amir_1750 e2010a9b05547f2867fb525e0bd7595e 451 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 87 127 4.2E-12 T 14-10-2018 IPR011964 YVTN beta-propeller repeat Amir_3090 9e55bffe287b0553ad5e3e3e23efa83b 283 SUPERFAMILY SSF46785 2 112 1.05E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3090 9e55bffe287b0553ad5e3e3e23efa83b 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.7E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3090 9e55bffe287b0553ad5e3e3e23efa83b 283 Gene3D G3DSA:3.40.190.10 92 161 1.2E-36 T 14-10-2018 Amir_3090 9e55bffe287b0553ad5e3e3e23efa83b 283 Pfam PF03466 LysR substrate binding domain 88 282 2.9E-38 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_3090 9e55bffe287b0553ad5e3e3e23efa83b 283 Gene3D G3DSA:3.40.190.10 162 259 1.2E-36 T 14-10-2018 Amir_3090 9e55bffe287b0553ad5e3e3e23efa83b 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3090 9e55bffe287b0553ad5e3e3e23efa83b 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3090 9e55bffe287b0553ad5e3e3e23efa83b 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3090 9e55bffe287b0553ad5e3e3e23efa83b 283 SUPERFAMILY SSF53850 88 282 6.36E-35 T 14-10-2018 Amir_3090 9e55bffe287b0553ad5e3e3e23efa83b 283 Gene3D G3DSA:1.10.10.10 1 82 9.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0314 185c25f6284b74b7a071f48a0345356a 209 SUPERFAMILY SSF55620 20 207 3.11E-74 T 14-10-2018 Amir_0314 185c25f6284b74b7a071f48a0345356a 209 Pfam PF01227 GTP cyclohydrolase I 29 206 8.5E-73 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Amir_0314 185c25f6284b74b7a071f48a0345356a 209 Gene3D G3DSA:3.30.1130.10 74 208 1.1E-56 T 14-10-2018 Amir_0314 185c25f6284b74b7a071f48a0345356a 209 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 30 207 7.5E-68 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Amir_0314 185c25f6284b74b7a071f48a0345356a 209 Gene3D G3DSA:1.10.286.10 15 71 9.0E-20 T 14-10-2018 Amir_0314 185c25f6284b74b7a071f48a0345356a 209 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 24 207 40.949 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Amir_0314 185c25f6284b74b7a071f48a0345356a 209 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 134 144 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Amir_2504 9bdd1b2b0870d97055a2c3f78ad799bd 410 SUPERFAMILY SSF88946 14 85 6.67E-9 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_2504 9bdd1b2b0870d97055a2c3f78ad799bd 410 Pfam PF08281 Sigma-70, region 4 101 151 2.7E-6 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_2504 9bdd1b2b0870d97055a2c3f78ad799bd 410 Pfam PF04542 Sigma-70 region 2 14 73 4.1E-5 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_2504 9bdd1b2b0870d97055a2c3f78ad799bd 410 Gene3D G3DSA:1.10.10.10 107 156 9.7E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2504 9bdd1b2b0870d97055a2c3f78ad799bd 410 SUPERFAMILY SSF88659 95 154 2.07E-9 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5476 365b8acebfe7d63ee679a1da358e53cc 761 SMART SM00530 8 64 2.7E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_5476 365b8acebfe7d63ee679a1da358e53cc 761 SUPERFAMILY SSF52540 85 342 4.0E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5476 365b8acebfe7d63ee679a1da358e53cc 761 Pfam PF13560 Helix-turn-helix domain 5 67 6.0E-17 T 14-10-2018 Amir_5476 365b8acebfe7d63ee679a1da358e53cc 761 PRINTS PR00364 Disease resistance protein signature 116 131 1.4E-9 T 14-10-2018 Amir_5476 365b8acebfe7d63ee679a1da358e53cc 761 PRINTS PR00364 Disease resistance protein signature 190 204 1.4E-9 T 14-10-2018 Amir_5476 365b8acebfe7d63ee679a1da358e53cc 761 PRINTS PR00364 Disease resistance protein signature 275 289 1.4E-9 T 14-10-2018 Amir_5476 365b8acebfe7d63ee679a1da358e53cc 761 SUPERFAMILY SSF47413 3 62 1.37E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_5476 365b8acebfe7d63ee679a1da358e53cc 761 SUPERFAMILY SSF48452 605 743 2.31E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5476 365b8acebfe7d63ee679a1da358e53cc 761 Gene3D G3DSA:3.40.50.300 83 234 6.2E-21 T 14-10-2018 Amir_5476 365b8acebfe7d63ee679a1da358e53cc 761 Gene3D G3DSA:1.25.40.10 558 761 7.6E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5476 365b8acebfe7d63ee679a1da358e53cc 761 Pfam PF00931 NB-ARC domain 113 348 1.4E-12 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 Amir_5476 365b8acebfe7d63ee679a1da358e53cc 761 SMART SM00382 113 244 0.0013 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5476 365b8acebfe7d63ee679a1da358e53cc 761 Gene3D G3DSA:1.10.260.40 2 81 3.3E-14 T 14-10-2018 Amir_6742 34c41f26d06b34fbccb367108ce782c9 70 Pfam PF12728 Helix-turn-helix domain 16 64 1.3E-14 T 14-10-2018 Amir_6742 34c41f26d06b34fbccb367108ce782c9 70 Gene3D G3DSA:1.10.1660.10 14 65 2.3E-9 T 14-10-2018 Amir_6742 34c41f26d06b34fbccb367108ce782c9 70 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 16 63 3.0E-19 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Amir_4361 140b1316862e042a2e86d4a20105f919 411 Pfam PF06722 Protein of unknown function (DUF1205) 185 276 3.0E-13 T 14-10-2018 IPR010610 Domain of unknown function DUF1205 Amir_4361 140b1316862e042a2e86d4a20105f919 411 Gene3D G3DSA:3.40.50.11450 2 388 1.1E-106 T 14-10-2018 Amir_4361 140b1316862e042a2e86d4a20105f919 411 Gene3D G3DSA:3.40.50.2000 206 375 1.1E-106 T 14-10-2018 Amir_4361 140b1316862e042a2e86d4a20105f919 411 SUPERFAMILY SSF53756 2 389 3.84E-60 T 14-10-2018 Amir_5121 4c9dae6ac4c2bf6aaf489d45f8c1f051 693 SUPERFAMILY SSF56601 226 687 1.43E-69 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_5121 4c9dae6ac4c2bf6aaf489d45f8c1f051 693 Gene3D G3DSA:1.10.3810.10 49 259 8.9E-69 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_5121 4c9dae6ac4c2bf6aaf489d45f8c1f051 693 Pfam PF00905 Penicillin binding protein transpeptidase domain 359 617 1.1E-22 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Amir_5121 4c9dae6ac4c2bf6aaf489d45f8c1f051 693 Gene3D G3DSA:3.40.710.10 296 693 2.5E-66 T 14-10-2018 Amir_5121 4c9dae6ac4c2bf6aaf489d45f8c1f051 693 SUPERFAMILY SSF53955 46 257 2.5E-65 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Amir_5121 4c9dae6ac4c2bf6aaf489d45f8c1f051 693 Pfam PF00912 Transglycosylase 57 244 1.2E-59 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_1175 373a93426d5b671ddb793218fad24a2b 268 PIRSF PIRSF006648 4 266 1.8E-25 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_1175 373a93426d5b671ddb793218fad24a2b 268 Pfam PF01061 ABC-2 type transporter 26 230 2.4E-17 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Amir_1175 373a93426d5b671ddb793218fad24a2b 268 PRINTS PR00164 ABC-2 type transport system membrane protein signature 117 142 4.0E-23 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_1175 373a93426d5b671ddb793218fad24a2b 268 PRINTS PR00164 ABC-2 type transport system membrane protein signature 72 94 4.0E-23 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_1175 373a93426d5b671ddb793218fad24a2b 268 PRINTS PR00164 ABC-2 type transport system membrane protein signature 190 209 4.0E-23 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_1175 373a93426d5b671ddb793218fad24a2b 268 PRINTS PR00164 ABC-2 type transport system membrane protein signature 42 63 4.0E-23 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_1175 373a93426d5b671ddb793218fad24a2b 268 PRINTS PR00164 ABC-2 type transport system membrane protein signature 154 178 4.0E-23 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_1175 373a93426d5b671ddb793218fad24a2b 268 PRINTS PR00164 ABC-2 type transport system membrane protein signature 210 229 4.0E-23 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_5123 ea704b226e7fcddd5ee6de426188c582 243 Gene3D G3DSA:1.10.10.10 176 235 2.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5123 ea704b226e7fcddd5ee6de426188c582 243 Pfam PF08281 Sigma-70, region 4 178 228 1.3E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_5123 ea704b226e7fcddd5ee6de426188c582 243 Gene3D G3DSA:1.10.1740.10 52 144 2.1E-13 T 14-10-2018 Amir_5123 ea704b226e7fcddd5ee6de426188c582 243 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 70 231 7.2E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_5123 ea704b226e7fcddd5ee6de426188c582 243 Pfam PF04542 Sigma-70 region 2 74 145 1.8E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5123 ea704b226e7fcddd5ee6de426188c582 243 SUPERFAMILY SSF88659 162 232 5.98E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5123 ea704b226e7fcddd5ee6de426188c582 243 SUPERFAMILY SSF88946 51 164 2.75E-18 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5386 3e3638b33beafa1fde43ce7e6f814c1e 143 Pfam PF06841 T4-like virus tail tube protein gp19 10 138 1.9E-31 T 14-10-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 Amir_5386 3e3638b33beafa1fde43ce7e6f814c1e 143 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 7 139 7.2E-29 T 14-10-2018 IPR011747 Conserved hypothetical protein CHP02241 Amir_4784 09230c79612450ce85095f817bf87d51 353 SUPERFAMILY SSF81345 14 346 3.01E-74 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_4784 09230c79612450ce85095f817bf87d51 353 Pfam PF01032 FecCD transport family 25 345 4.3E-87 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_4784 09230c79612450ce85095f817bf87d51 353 Gene3D G3DSA:1.10.3470.10 11 350 6.2E-93 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_5259 342723bf55cc23273bb5f2a05dfcf83b 254 Pfam PF07702 UTRA domain 95 231 9.8E-36 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Amir_5259 342723bf55cc23273bb5f2a05dfcf83b 254 SMART SM00345 17 74 8.8E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5259 342723bf55cc23273bb5f2a05dfcf83b 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 7.2E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5259 342723bf55cc23273bb5f2a05dfcf83b 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 7.2E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5259 342723bf55cc23273bb5f2a05dfcf83b 254 SUPERFAMILY SSF64288 62 239 1.38E-48 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Amir_5259 342723bf55cc23273bb5f2a05dfcf83b 254 SMART SM00866 94 232 1.1E-39 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Amir_5259 342723bf55cc23273bb5f2a05dfcf83b 254 SUPERFAMILY SSF46785 9 84 5.75E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5259 342723bf55cc23273bb5f2a05dfcf83b 254 Gene3D G3DSA:3.40.1410.10 76 241 3.4E-47 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Amir_5259 342723bf55cc23273bb5f2a05dfcf83b 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 73 2.8E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_5259 342723bf55cc23273bb5f2a05dfcf83b 254 Gene3D G3DSA:1.10.10.10 8 75 1.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0591 e64817a8a4bf62f64460f20fa427255f 1192 SUPERFAMILY SSF52540 55 294 5.24E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3661 97926c058f96bad78c030f0f91ad9a5e 388 Gene3D G3DSA:3.40.50.2000 205 364 3.3E-19 T 14-10-2018 Amir_3661 97926c058f96bad78c030f0f91ad9a5e 388 SUPERFAMILY SSF53756 4 378 2.04E-25 T 14-10-2018 Amir_3661 97926c058f96bad78c030f0f91ad9a5e 388 Pfam PF13692 Glycosyl transferases group 1 209 344 3.8E-26 T 14-10-2018 Amir_5192 d83dd08434bb4b2e2b13e4904a722d4e 445 Pfam PF07730 Histidine kinase 229 293 2.6E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_5192 d83dd08434bb4b2e2b13e4904a722d4e 445 Gene3D G3DSA:3.30.565.10 300 419 1.1E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5192 d83dd08434bb4b2e2b13e4904a722d4e 445 SUPERFAMILY SSF55874 312 418 5.47E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_7032 1a0ae018f817c2c7b1fad5ab010f8167 181 SUPERFAMILY SSF46785 2 171 5.34E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_7032 1a0ae018f817c2c7b1fad5ab010f8167 181 Pfam PF03551 Transcriptional regulator PadR-like family 6 83 4.9E-21 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal Amir_7032 1a0ae018f817c2c7b1fad5ab010f8167 181 Gene3D G3DSA:1.10.10.10 1 95 1.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1680 3473b21ceca95cc46d6bdaaeb3e72ac1 326 Gene3D G3DSA:1.10.3720.10 91 316 1.2E-15 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1680 3473b21ceca95cc46d6bdaaeb3e72ac1 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 324 7.8E-39 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_1680 3473b21ceca95cc46d6bdaaeb3e72ac1 326 SUPERFAMILY SSF161098 95 323 1.29E-15 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0300 08cebb5ae27735236037d057c2faf869 364 Pfam PF00296 Luciferase-like monooxygenase 54 349 1.5E-65 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_0300 08cebb5ae27735236037d057c2faf869 364 SUPERFAMILY SSF51679 56 352 1.77E-56 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_0300 08cebb5ae27735236037d057c2faf869 364 TIGRFAM TIGR03617 F420_MSMEG_2256: probable F420-dependent oxidoreductase, MSMEG_2256 family 63 354 2.8E-132 T 14-10-2018 IPR019919 Luciferase-like, F420-dependent oxidoreductase, MSMEG2256, predicted Amir_0300 08cebb5ae27735236037d057c2faf869 364 Gene3D G3DSA:3.20.20.30 49 360 2.3E-73 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_5409 4c6984fab4d5de6b089e5dc9f57f5c91 158 Gene3D G3DSA:3.40.140.10 4 155 3.1E-34 T 14-10-2018 Amir_5409 4c6984fab4d5de6b089e5dc9f57f5c91 158 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 15 107 7.1E-16 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Amir_5409 4c6984fab4d5de6b089e5dc9f57f5c91 158 SUPERFAMILY SSF53927 15 153 3.35E-34 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Amir_1271 8f3ce0b2c02366d3246c89f511cc133f 416 Pfam PF01966 HD domain 72 211 1.6E-20 T 14-10-2018 IPR006674 HD domain Amir_1271 8f3ce0b2c02366d3246c89f511cc133f 416 Gene3D G3DSA:1.10.3210.10 16 411 1.2E-87 T 14-10-2018 Amir_1271 8f3ce0b2c02366d3246c89f511cc133f 416 Pfam PF13286 Phosphohydrolase-associated domain 320 410 3.2E-21 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain Amir_1271 8f3ce0b2c02366d3246c89f511cc133f 416 SMART SM00471 68 221 1.7E-12 T 14-10-2018 IPR003607 HD/PDEase domain Amir_1271 8f3ce0b2c02366d3246c89f511cc133f 416 SUPERFAMILY SSF109604 30 229 6.28E-54 T 14-10-2018 Amir_1271 8f3ce0b2c02366d3246c89f511cc133f 416 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 413 30.03 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 Amir_1271 8f3ce0b2c02366d3246c89f511cc133f 416 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 31 410 6.9E-77 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 Amir_5284 8d47ec4d8745c08c93ea4f4380b78649 194 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 90 163 1.4E-21 T 14-10-2018 IPR025161 Putative transposase IS4/IS5 family Amir_1613 79c05eedced34b4a35f2d0a196cbabf8 160 Gene3D G3DSA:3.30.70.1450 87 159 1.4E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amir_1613 79c05eedced34b4a35f2d0a196cbabf8 160 PIRSF PIRSF005028 1 160 2.8E-52 T 14-10-2018 IPR026278 Potassium/proton antiporter subunit KhtT Amir_1613 79c05eedced34b4a35f2d0a196cbabf8 160 Pfam PF02080 TrkA-C domain 89 157 4.3E-15 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Amir_1613 79c05eedced34b4a35f2d0a196cbabf8 160 SUPERFAMILY SSF116726 85 158 3.01E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amir_4632 643bf3fada3dd4d7842de9f485d9e939 295 Pfam PF03466 LysR substrate binding domain 88 286 1.3E-34 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_4632 643bf3fada3dd4d7842de9f485d9e939 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4632 643bf3fada3dd4d7842de9f485d9e939 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4632 643bf3fada3dd4d7842de9f485d9e939 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4632 643bf3fada3dd4d7842de9f485d9e939 295 SUPERFAMILY SSF46785 1 109 7.7E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4632 643bf3fada3dd4d7842de9f485d9e939 295 Gene3D G3DSA:1.10.10.10 1 89 3.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4632 643bf3fada3dd4d7842de9f485d9e939 295 SUPERFAMILY SSF53850 90 287 3.09E-30 T 14-10-2018 Amir_4632 643bf3fada3dd4d7842de9f485d9e939 295 Gene3D G3DSA:3.40.190.10 168 262 5.4E-34 T 14-10-2018 Amir_4632 643bf3fada3dd4d7842de9f485d9e939 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.3E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4632 643bf3fada3dd4d7842de9f485d9e939 295 Gene3D G3DSA:3.40.190.10 91 269 5.4E-34 T 14-10-2018 Amir_6661 6f8135012f793a16e0f9c6cbe6b61a97 292 SUPERFAMILY SSF55909 31 291 2.94E-56 T 14-10-2018 Amir_6661 6f8135012f793a16e0f9c6cbe6b61a97 292 Gene3D G3DSA:3.75.10.10 31 289 1.5E-57 T 14-10-2018 Amir_6661 6f8135012f793a16e0f9c6cbe6b61a97 292 Pfam PF02274 Amidinotransferase 87 290 1.3E-11 T 14-10-2018 Amir_1192 9862cdaba7b790bc1cf7172c5cbf6872 181 SUPERFAMILY SSF55729 2 167 2.8E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_1192 9862cdaba7b790bc1cf7172c5cbf6872 181 Pfam PF13302 Acetyltransferase (GNAT) domain 6 144 7.9E-28 T 14-10-2018 IPR000182 GNAT domain Amir_1192 9862cdaba7b790bc1cf7172c5cbf6872 181 Gene3D G3DSA:3.40.630.30 1 177 6.3E-44 T 14-10-2018 Amir_0380 a3e6d2a595f584ef008a7ef9c2f5b833 447 Pfam PF00175 Oxidoreductase NAD-binding domain 328 424 1.2E-6 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Amir_0380 a3e6d2a595f584ef008a7ef9c2f5b833 447 PRINTS PR00410 Phenol hydroxylase reductase family signature 311 320 1.6E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Amir_0380 a3e6d2a595f584ef008a7ef9c2f5b833 447 PRINTS PR00410 Phenol hydroxylase reductase family signature 327 346 1.6E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Amir_0380 a3e6d2a595f584ef008a7ef9c2f5b833 447 PRINTS PR00410 Phenol hydroxylase reductase family signature 411 419 1.6E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Amir_0380 a3e6d2a595f584ef008a7ef9c2f5b833 447 SUPERFAMILY SSF63380 217 316 6.45E-16 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amir_0380 a3e6d2a595f584ef008a7ef9c2f5b833 447 Gene3D G3DSA:3.40.50.80 322 446 1.3E-22 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amir_0380 a3e6d2a595f584ef008a7ef9c2f5b833 447 SUPERFAMILY SSF52343 307 441 6.81E-24 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amir_0380 a3e6d2a595f584ef008a7ef9c2f5b833 447 Gene3D G3DSA:2.40.30.10 218 315 7.9E-12 T 14-10-2018 Amir_0380 a3e6d2a595f584ef008a7ef9c2f5b833 447 Pfam PF01794 Ferric reductase like transmembrane component 53 175 8.6E-14 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain Amir_3786 3792741442e4127d9f6a2c2d6d6e3f4f 224 Pfam PF08445 FR47-like protein 130 216 1.3E-24 T 14-10-2018 IPR013653 FR47-like GO:0016747 Amir_3786 3792741442e4127d9f6a2c2d6d6e3f4f 224 SUPERFAMILY SSF55729 99 214 5.67E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_3786 3792741442e4127d9f6a2c2d6d6e3f4f 224 Gene3D G3DSA:3.40.630.30 1 220 1.4E-64 T 14-10-2018 Amir_2492 9cec6cfc01c07a69f45ddeb52229f5d7 590 SUPERFAMILY SSF47336 491 564 1.3E-11 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2492 9cec6cfc01c07a69f45ddeb52229f5d7 590 Gene3D G3DSA:3.40.50.12780 9 386 4.4E-113 T 14-10-2018 Amir_2492 9cec6cfc01c07a69f45ddeb52229f5d7 590 Pfam PF00550 Phosphopantetheine attachment site 501 564 2.3E-6 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2492 9cec6cfc01c07a69f45ddeb52229f5d7 590 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 35 418 4.2E-112 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_2492 9cec6cfc01c07a69f45ddeb52229f5d7 590 Pfam PF00501 AMP-binding enzyme 14 394 2.1E-80 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_2492 9cec6cfc01c07a69f45ddeb52229f5d7 590 Gene3D G3DSA:3.30.300.30 389 485 8.2E-23 T 14-10-2018 Amir_2492 9cec6cfc01c07a69f45ddeb52229f5d7 590 ProSitePatterns PS00455 Putative AMP-binding domain signature. 146 157 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_2492 9cec6cfc01c07a69f45ddeb52229f5d7 590 Pfam PF13193 AMP-binding enzyme C-terminal domain 402 471 2.3E-5 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_2492 9cec6cfc01c07a69f45ddeb52229f5d7 590 Gene3D G3DSA:1.10.1200.10 486 570 1.5E-17 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2492 9cec6cfc01c07a69f45ddeb52229f5d7 590 SUPERFAMILY SSF56801 5 507 3.92E-131 T 14-10-2018 Amir_5065 375fbd84c7797cd03f427f4896e860fb 336 Gene3D G3DSA:3.40.50.1980 33 176 1.0E-47 T 14-10-2018 Amir_5065 375fbd84c7797cd03f427f4896e860fb 336 Pfam PF01497 Periplasmic binding protein 95 286 3.1E-23 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Amir_5065 375fbd84c7797cd03f427f4896e860fb 336 Gene3D G3DSA:3.40.50.1980 178 335 1.7E-37 T 14-10-2018 Amir_5065 375fbd84c7797cd03f427f4896e860fb 336 SUPERFAMILY SSF53807 39 302 1.1E-46 T 14-10-2018 Amir_4369 03eb84cbe3b90d3d162c47f9bd91173b 206 Gene3D G3DSA:1.10.357.10 5 205 1.1E-41 T 14-10-2018 Amir_4369 03eb84cbe3b90d3d162c47f9bd91173b 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_4369 03eb84cbe3b90d3d162c47f9bd91173b 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.9E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4369 03eb84cbe3b90d3d162c47f9bd91173b 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.9E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4369 03eb84cbe3b90d3d162c47f9bd91173b 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 3.0E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4369 03eb84cbe3b90d3d162c47f9bd91173b 206 SUPERFAMILY SSF46689 8 76 2.1E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4777 c131879984af318e498ac944a4f5cc52 414 Pfam PF07690 Major Facilitator Superfamily 27 356 2.1E-31 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_4777 c131879984af318e498ac944a4f5cc52 414 SUPERFAMILY SSF103473 22 399 3.01E-38 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4777 c131879984af318e498ac944a4f5cc52 414 Gene3D G3DSA:1.20.1250.20 22 399 1.9E-32 T 14-10-2018 Amir_1299 707a46954b65a5cc63b5b69dcbb62493 340 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 94 266 6.4E-22 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amir_1299 707a46954b65a5cc63b5b69dcbb62493 340 Gene3D G3DSA:1.10.260.150 41 317 8.4E-47 T 14-10-2018 Amir_1299 707a46954b65a5cc63b5b69dcbb62493 340 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 93 266 9.5E-30 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amir_5417 bd9749c7cd112f758ed89eb28c18110c 140 SMART SM00960 12 102 1.6E-32 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain Amir_5417 bd9749c7cd112f758ed89eb28c18110c 140 SUPERFAMILY SSF103196 5 129 1.5E-33 T 14-10-2018 Amir_5417 bd9749c7cd112f758ed89eb28c18110c 140 Gene3D G3DSA:3.30.450.30 8 133 7.0E-42 T 14-10-2018 Amir_5417 bd9749c7cd112f758ed89eb28c18110c 140 Pfam PF03259 Roadblock/LC7 domain 13 102 1.0E-23 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain Amir_3628 7c588dc5fb5609332ff3a4e4dbd5bf9e 131 Pfam PF14430 Immunity protein Imm1 15 127 5.0E-23 T 14-10-2018 IPR025680 Immunity protein Imm1 Amir_1361 71c9bbdbaea14a842ff402b1004a5d95 137 Pfam PF14430 Immunity protein Imm1 14 128 1.2E-31 T 14-10-2018 IPR025680 Immunity protein Imm1 Amir_1042 02939dcc89b8053098601058025ec6b2 68 PIRSF PIRSF002599 1 68 2.1E-26 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 Amir_1042 02939dcc89b8053098601058025ec6b2 68 SMART SM00357 4 68 3.4E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Amir_1042 02939dcc89b8053098601058025ec6b2 68 Gene3D G3DSA:2.40.50.140 1 66 8.3E-31 T 14-10-2018 Amir_1042 02939dcc89b8053098601058025ec6b2 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 67 5.3E-32 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_1042 02939dcc89b8053098601058025ec6b2 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 35 - T 14-10-2018 IPR019844 Cold-shock conserved site Amir_1042 02939dcc89b8053098601058025ec6b2 68 SUPERFAMILY SSF50249 2 67 4.04E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_1042 02939dcc89b8053098601058025ec6b2 68 PRINTS PR00050 Cold shock protein signature 26 35 7.6E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_1042 02939dcc89b8053098601058025ec6b2 68 PRINTS PR00050 Cold shock protein signature 41 59 7.6E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_1042 02939dcc89b8053098601058025ec6b2 68 PRINTS PR00050 Cold shock protein signature 5 20 7.6E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amir_2856 dd703b2d9c9bf089b62fab2f15470d04 233 Gene3D G3DSA:3.40.50.1820 2 225 1.5E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2856 dd703b2d9c9bf089b62fab2f15470d04 233 Pfam PF12697 Alpha/beta hydrolase family 3 218 7.0E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_2856 dd703b2d9c9bf089b62fab2f15470d04 233 SUPERFAMILY SSF53474 3 222 4.59E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4222 19e17fbfe7ef0287ce93f37ccb23e3f9 110 Pfam PF10824 Excreted virulence factor EspC, type VII ESX diderm 6 93 1.5E-6 T 14-10-2018 IPR022536 ESX-1 secretion-associated protein EspC GO:0009306 Amir_3753 b7e519afd1196c7d03869fa431ceca40 246 Gene3D G3DSA:3.30.565.10 113 244 1.6E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3753 b7e519afd1196c7d03869fa431ceca40 246 Gene3D G3DSA:3.30.750.24 2 109 3.6E-12 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3753 b7e519afd1196c7d03869fa431ceca40 246 SUPERFAMILY SSF52091 5 87 5.1E-7 T 14-10-2018 IPR036513 STAS domain superfamily Amir_5077 a16c49bd4bf7e0ac4a0c910cd04c553d 195 Pfam PF01810 LysE type translocator 12 194 2.6E-37 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Amir_4036 ca3a7bf3e8d6abfc4ca02bedd5cb2336 422 Gene3D G3DSA:1.20.1530.20 7 408 1.6E-89 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Amir_4036 ca3a7bf3e8d6abfc4ca02bedd5cb2336 422 Pfam PF00999 Sodium/hydrogen exchanger family 15 397 8.5E-52 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Amir_4311 073af36ffa37b67e8cf0e9b9ac402ec3 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4311 073af36ffa37b67e8cf0e9b9ac402ec3 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4311 073af36ffa37b67e8cf0e9b9ac402ec3 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4311 073af36ffa37b67e8cf0e9b9ac402ec3 298 Gene3D G3DSA:3.40.190.10 96 260 1.1E-33 T 14-10-2018 Amir_4311 073af36ffa37b67e8cf0e9b9ac402ec3 298 SUPERFAMILY SSF53850 90 265 1.55E-22 T 14-10-2018 Amir_4311 073af36ffa37b67e8cf0e9b9ac402ec3 298 Gene3D G3DSA:3.40.190.10 162 254 1.1E-33 T 14-10-2018 Amir_4311 073af36ffa37b67e8cf0e9b9ac402ec3 298 Pfam PF03466 LysR substrate binding domain 89 263 8.9E-25 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_4311 073af36ffa37b67e8cf0e9b9ac402ec3 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.3E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4311 073af36ffa37b67e8cf0e9b9ac402ec3 298 Gene3D G3DSA:1.10.10.10 4 94 4.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4311 073af36ffa37b67e8cf0e9b9ac402ec3 298 SUPERFAMILY SSF46785 5 111 1.21E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3421 dfd010b859f117a966653e5a1d96c1d9 402 ProSitePatterns PS01270 Band 7 protein family signature. 135 163 - T 14-10-2018 IPR018080 Band 7/stomatin-like, conserved site Amir_3421 dfd010b859f117a966653e5a1d96c1d9 402 SMART SM00244 21 179 1.7E-55 T 14-10-2018 IPR001107 Band 7 domain Amir_3421 dfd010b859f117a966653e5a1d96c1d9 402 PRINTS PR00721 Stomatin signature 174 195 8.2E-35 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Amir_3421 dfd010b859f117a966653e5a1d96c1d9 402 PRINTS PR00721 Stomatin signature 111 128 8.2E-35 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Amir_3421 dfd010b859f117a966653e5a1d96c1d9 402 PRINTS PR00721 Stomatin signature 155 173 8.2E-35 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Amir_3421 dfd010b859f117a966653e5a1d96c1d9 402 PRINTS PR00721 Stomatin signature 28 50 8.2E-35 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Amir_3421 dfd010b859f117a966653e5a1d96c1d9 402 PRINTS PR00721 Stomatin signature 76 97 8.2E-35 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Amir_3421 dfd010b859f117a966653e5a1d96c1d9 402 PRINTS PR00721 Stomatin signature 131 154 8.2E-35 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Amir_3421 dfd010b859f117a966653e5a1d96c1d9 402 Pfam PF01145 SPFH domain / Band 7 family 25 195 2.3E-34 T 14-10-2018 IPR001107 Band 7 domain Amir_3421 dfd010b859f117a966653e5a1d96c1d9 402 SUPERFAMILY SSF117892 52 186 1.31E-40 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily Amir_3421 dfd010b859f117a966653e5a1d96c1d9 402 Gene3D G3DSA:3.30.479.30 49 181 1.0E-44 T 14-10-2018 Amir_5562 760d82cb80b43693bf111f18180d0c7b 144 Gene3D G3DSA:3.30.40.60 2 93 1.6E-6 T 14-10-2018 Amir_5562 760d82cb80b43693bf111f18180d0c7b 144 SMART SM00507 25 84 0.0057 T 14-10-2018 IPR003615 HNH nuclease Amir_1402 4729dac92a943d1037529dfaa2db8fc4 146 Pfam PF02627 Carboxymuconolactone decarboxylase family 10 90 1.2E-16 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Amir_1402 4729dac92a943d1037529dfaa2db8fc4 146 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 27 75 1.1E-15 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Amir_1402 4729dac92a943d1037529dfaa2db8fc4 146 Gene3D G3DSA:1.20.1290.10 1 144 1.0E-43 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amir_1402 4729dac92a943d1037529dfaa2db8fc4 146 SUPERFAMILY SSF69118 8 142 8.54E-40 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amir_6132 b01f653ce257e556fa76e90a5dfdbfcc 418 Gene3D G3DSA:3.65.10.10 7 414 1.3E-153 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Amir_6132 b01f653ce257e556fa76e90a5dfdbfcc 418 SUPERFAMILY SSF55205 4 416 3.53E-129 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Amir_6132 b01f653ce257e556fa76e90a5dfdbfcc 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3 415 3.2E-162 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_6132 b01f653ce257e556fa76e90a5dfdbfcc 418 Gene3D G3DSA:3.65.10.10 21 230 1.3E-153 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Amir_6132 b01f653ce257e556fa76e90a5dfdbfcc 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 2 416 39.451 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_6132 b01f653ce257e556fa76e90a5dfdbfcc 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 9.3E-102 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Amir_0765 bebbd0e844f1fe2060875066890befb0 349 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 252 319 1.3E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_0765 bebbd0e844f1fe2060875066890befb0 349 SUPERFAMILY SSF52540 19 272 8.84E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0765 bebbd0e844f1fe2060875066890befb0 349 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 250 340 1.9E-27 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_0765 bebbd0e844f1fe2060875066890befb0 349 SMART SM00382 56 250 2.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0765 bebbd0e844f1fe2060875066890befb0 349 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0765 bebbd0e844f1fe2060875066890befb0 349 Pfam PF00005 ABC transporter 48 200 1.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0765 bebbd0e844f1fe2060875066890befb0 349 Gene3D G3DSA:3.40.50.300 17 346 2.8E-102 T 14-10-2018 Amir_5233 13bcdb293781fbf173944d97fbac36ac 100 Pfam PF13396 Phospholipase_D-nuclease N-terminal 42 83 7.5E-7 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal Amir_6866 50eb139c4a4e70ce9900856e6045641d 272 Pfam PF14011 EspG family 16 257 1.1E-69 T 14-10-2018 IPR025734 EspG family Amir_4247 63200dcaa8b0cc1109ad0d4b39747249 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 8.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4247 63200dcaa8b0cc1109ad0d4b39747249 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 8.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4247 63200dcaa8b0cc1109ad0d4b39747249 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 8.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4247 63200dcaa8b0cc1109ad0d4b39747249 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 8.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4247 63200dcaa8b0cc1109ad0d4b39747249 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 8.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4247 63200dcaa8b0cc1109ad0d4b39747249 275 SUPERFAMILY SSF51735 3 231 3.66E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4247 63200dcaa8b0cc1109ad0d4b39747249 275 Gene3D G3DSA:3.40.50.720 2 272 2.0E-66 T 14-10-2018 Amir_4247 63200dcaa8b0cc1109ad0d4b39747249 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 5.7E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4247 63200dcaa8b0cc1109ad0d4b39747249 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 5.7E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4247 63200dcaa8b0cc1109ad0d4b39747249 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 5.7E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4247 63200dcaa8b0cc1109ad0d4b39747249 275 Pfam PF00106 short chain dehydrogenase 5 184 2.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_1518 7c7d1e7f9a6d2b010d2fbbcc8e07198b 125 PIRSF PIRSF006910 1 124 2.9E-51 T 14-10-2018 IPR016499 Nucleic acid binding protein, Rv2694c, predicted Amir_1518 7c7d1e7f9a6d2b010d2fbbcc8e07198b 125 Gene3D G3DSA:2.40.50.140 38 124 4.5E-6 T 14-10-2018 Amir_6764 812a3d4b842fc1f2c8d2f9d25f58ab8f 245 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 10 128 1.5E-19 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 Amir_6764 812a3d4b842fc1f2c8d2f9d25f58ab8f 245 Pfam PF07398 MDMPI C-terminal domain 146 239 3.2E-8 T 14-10-2018 IPR010872 MDMPI C-terminal Amir_6764 812a3d4b842fc1f2c8d2f9d25f58ab8f 245 SUPERFAMILY SSF109854 2 128 2.93E-10 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_6764 812a3d4b842fc1f2c8d2f9d25f58ab8f 245 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 10 226 9.5E-20 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type Amir_1926 03c0e2f50fa9368ec275acbe23a1a61a 344 Gene3D G3DSA:3.40.50.2300 162 294 1.6E-72 T 14-10-2018 Amir_1926 03c0e2f50fa9368ec275acbe23a1a61a 344 SUPERFAMILY SSF53822 64 339 2.69E-60 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_1926 03c0e2f50fa9368ec275acbe23a1a61a 344 Gene3D G3DSA:1.10.260.40 1 56 5.5E-23 T 14-10-2018 Amir_1926 03c0e2f50fa9368ec275acbe23a1a61a 344 SUPERFAMILY SSF47413 2 61 5.91E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1926 03c0e2f50fa9368ec275acbe23a1a61a 344 SMART SM00354 3 73 4.0E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1926 03c0e2f50fa9368ec275acbe23a1a61a 344 Gene3D G3DSA:3.40.50.2300 57 311 1.6E-72 T 14-10-2018 Amir_1926 03c0e2f50fa9368ec275acbe23a1a61a 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 2.4E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1926 03c0e2f50fa9368ec275acbe23a1a61a 344 Pfam PF13377 Periplasmic binding protein-like domain 171 338 6.9E-35 T 14-10-2018 Amir_1926 03c0e2f50fa9368ec275acbe23a1a61a 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 5.6E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1926 03c0e2f50fa9368ec275acbe23a1a61a 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 5.6E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1926 03c0e2f50fa9368ec275acbe23a1a61a 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 14-10-2018 Amir_0316 f740798a41393b9f8b86ef6cf2bc52c3 125 SUPERFAMILY SSF55620 9 125 7.78E-36 T 14-10-2018 Amir_0316 f740798a41393b9f8b86ef6cf2bc52c3 125 TIGRFAM TIGR00526 folB_dom: FolB domain 9 125 1.9E-32 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Amir_0316 f740798a41393b9f8b86ef6cf2bc52c3 125 Pfam PF02152 Dihydroneopterin aldolase 11 121 6.7E-33 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Amir_0316 f740798a41393b9f8b86ef6cf2bc52c3 125 Gene3D G3DSA:3.30.1130.10 8 125 7.8E-43 T 14-10-2018 Amir_0316 f740798a41393b9f8b86ef6cf2bc52c3 125 SMART SM00905 11 123 2.0E-49 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Amir_0316 f740798a41393b9f8b86ef6cf2bc52c3 125 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 9 123 4.1E-38 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Amir_0171 b485a2f208e86fad4cee7cf9f0367840 160 Pfam PF14437 MafB19-like deaminase 22 148 5.1E-21 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Amir_0171 b485a2f208e86fad4cee7cf9f0367840 160 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 10 151 42.059 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Amir_0171 b485a2f208e86fad4cee7cf9f0367840 160 SUPERFAMILY SSF53927 9 150 8.5E-43 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Amir_0171 b485a2f208e86fad4cee7cf9f0367840 160 Gene3D G3DSA:3.40.140.10 5 158 1.3E-45 T 14-10-2018 Amir_0171 b485a2f208e86fad4cee7cf9f0367840 160 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Amir_1209 d8aebf9a6d2fe40ff79e01a46b46c578 256 Gene3D G3DSA:3.10.180.10 132 253 5.1E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_1209 d8aebf9a6d2fe40ff79e01a46b46c578 256 Gene3D G3DSA:3.10.180.10 8 125 3.0E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_1209 d8aebf9a6d2fe40ff79e01a46b46c578 256 SUPERFAMILY SSF54593 12 162 2.69E-16 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_1209 d8aebf9a6d2fe40ff79e01a46b46c578 256 SUPERFAMILY SSF54593 139 250 3.76E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_3653 2818503c3247c1c3573679c10e94f8d9 276 Gene3D G3DSA:3.60.10.10 5 263 2.6E-31 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Amir_3653 2818503c3247c1c3573679c10e94f8d9 276 SUPERFAMILY SSF56219 7 259 2.88E-29 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Amir_3653 2818503c3247c1c3573679c10e94f8d9 276 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 10 251 2.2E-7 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Amir_6093 839ea56b84fb48fd9b9ec9ba8c68d9cb 344 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 331 4.4E-36 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amir_5340 da01ad78400094656cd3bd5f314dfa68 209 Pfam PF00106 short chain dehydrogenase 5 168 8.0E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5340 da01ad78400094656cd3bd5f314dfa68 209 Gene3D G3DSA:3.40.50.720 1 209 7.2E-45 T 14-10-2018 Amir_5340 da01ad78400094656cd3bd5f314dfa68 209 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 164 1.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5340 da01ad78400094656cd3bd5f314dfa68 209 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 101 117 1.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5340 da01ad78400094656cd3bd5f314dfa68 209 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 145 1.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5340 da01ad78400094656cd3bd5f314dfa68 209 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 52 63 1.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5340 da01ad78400094656cd3bd5f314dfa68 209 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 189 1.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5340 da01ad78400094656cd3bd5f314dfa68 209 SUPERFAMILY SSF51735 4 191 2.14E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1153 faab984164fa56996ff37052815a863a 209 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 121 134 - T 14-10-2018 IPR033135 ClpP, histidine active site Amir_1153 faab984164fa56996ff37052815a863a 209 SUPERFAMILY SSF52096 20 204 3.98E-61 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_1153 faab984164fa56996ff37052815a863a 209 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 2.0E-41 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1153 faab984164fa56996ff37052815a863a 209 PRINTS PR00127 Clp protease catalytic subunit P signature 120 139 2.0E-41 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1153 faab984164fa56996ff37052815a863a 209 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 2.0E-41 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1153 faab984164fa56996ff37052815a863a 209 PRINTS PR00127 Clp protease catalytic subunit P signature 28 43 2.0E-41 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1153 faab984164fa56996ff37052815a863a 209 PRINTS PR00127 Clp protease catalytic subunit P signature 178 197 2.0E-41 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1153 faab984164fa56996ff37052815a863a 209 Gene3D G3DSA:3.90.226.10 2 209 1.3E-75 T 14-10-2018 Amir_1153 faab984164fa56996ff37052815a863a 209 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 12 203 38.768 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1153 faab984164fa56996ff37052815a863a 209 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 99 110 - T 14-10-2018 IPR018215 ClpP, Ser active site Amir_1153 faab984164fa56996ff37052815a863a 209 Pfam PF00574 Clp protease 27 200 1.1E-73 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Amir_6013 f6ac2e226735a4b9f04ba3f60e844d48 537 SMART SM00917 380 530 1.3E-35 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amir_6013 f6ac2e226735a4b9f04ba3f60e844d48 537 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 8 530 8.9E-176 T 14-10-2018 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 Amir_6013 f6ac2e226735a4b9f04ba3f60e844d48 537 Gene3D G3DSA:3.30.160.270 402 530 7.7E-7 T 14-10-2018 Amir_6013 f6ac2e226735a4b9f04ba3f60e844d48 537 SUPERFAMILY SSF110921 403 526 1.7E-22 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amir_6013 f6ac2e226735a4b9f04ba3f60e844d48 537 Pfam PF08502 LeuA allosteric (dimerisation) domain 380 527 2.9E-25 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amir_6013 f6ac2e226735a4b9f04ba3f60e844d48 537 SUPERFAMILY SSF51569 4 298 1.21E-70 T 14-10-2018 Amir_6013 f6ac2e226735a4b9f04ba3f60e844d48 537 Gene3D G3DSA:3.20.20.70 8 330 2.3E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_6013 f6ac2e226735a4b9f04ba3f60e844d48 537 Pfam PF00682 HMGL-like 10 260 1.1E-38 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Amir_6013 f6ac2e226735a4b9f04ba3f60e844d48 537 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 15 31 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amir_7016 679605b07f7180dd5f49fec2fc86a111 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 52 234 6.4E-48 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Amir_7016 679605b07f7180dd5f49fec2fc86a111 239 SUPERFAMILY SSF53335 10 233 3.03E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_7016 679605b07f7180dd5f49fec2fc86a111 239 Pfam PF02390 Putative methyltransferase 62 225 2.3E-53 T 14-10-2018 Amir_7016 679605b07f7180dd5f49fec2fc86a111 239 Gene3D G3DSA:3.40.50.150 25 237 1.0E-66 T 14-10-2018 Amir_7016 679605b07f7180dd5f49fec2fc86a111 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 19 234 28.838 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Amir_2516 b74d0c6059088064d85708985ed44c52 185 Pfam PF07681 DoxX 21 123 8.7E-5 T 14-10-2018 IPR032808 DoxX family Amir_1822 e33e1c8ac5617c65fbe676b6f9568ccc 429 Pfam PF00553 Cellulose binding domain 326 426 4.6E-30 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_1822 e33e1c8ac5617c65fbe676b6f9568ccc 429 Gene3D G3DSA:2.70.50.50 32 219 5.6E-64 T 14-10-2018 Amir_1822 e33e1c8ac5617c65fbe676b6f9568ccc 429 SMART SM00060 228 304 1.8E-9 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 Amir_1822 e33e1c8ac5617c65fbe676b6f9568ccc 429 Gene3D G3DSA:2.60.40.290 320 428 1.3E-32 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_1822 e33e1c8ac5617c65fbe676b6f9568ccc 429 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 32 214 2.7E-40 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal Amir_1822 e33e1c8ac5617c65fbe676b6f9568ccc 429 Pfam PF00041 Fibronectin type III domain 230 308 6.8E-10 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 Amir_1822 e33e1c8ac5617c65fbe676b6f9568ccc 429 SUPERFAMILY SSF49384 321 426 7.67E-32 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_1822 e33e1c8ac5617c65fbe676b6f9568ccc 429 SUPERFAMILY SSF81296 32 217 1.09E-42 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_1822 e33e1c8ac5617c65fbe676b6f9568ccc 429 SMART SM00637 326 426 2.1E-42 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_1822 e33e1c8ac5617c65fbe676b6f9568ccc 429 SUPERFAMILY SSF49265 224 316 3.57E-17 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 Amir_1822 e33e1c8ac5617c65fbe676b6f9568ccc 429 Gene3D G3DSA:2.60.40.10 226 315 4.1E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_4743 b6bdf19e7908d6ed853d461be311ab9d 267 SUPERFAMILY SSF52540 18 238 1.41E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4743 b6bdf19e7908d6ed853d461be311ab9d 267 Gene3D G3DSA:3.40.50.300 11 245 1.0E-57 T 14-10-2018 Amir_4743 b6bdf19e7908d6ed853d461be311ab9d 267 SMART SM00382 42 227 9.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4743 b6bdf19e7908d6ed853d461be311ab9d 267 Pfam PF00005 ABC transporter 43 179 6.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5468 a964290e3cd1918ea5b0b83a012bb385 223 Pfam PF00072 Response regulator receiver domain 3 112 4.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5468 a964290e3cd1918ea5b0b83a012bb385 223 SMART SM00448 1 112 1.4E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5468 a964290e3cd1918ea5b0b83a012bb385 223 SUPERFAMILY SSF46894 123 221 1.62E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_5468 a964290e3cd1918ea5b0b83a012bb385 223 Gene3D G3DSA:3.40.50.2300 1 121 4.9E-36 T 14-10-2018 Amir_5468 a964290e3cd1918ea5b0b83a012bb385 223 SUPERFAMILY SSF52172 1 118 1.11E-37 T 14-10-2018 IPR011006 CheY-like superfamily Amir_5468 a964290e3cd1918ea5b0b83a012bb385 223 SMART SM00862 145 220 4.5E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_5468 a964290e3cd1918ea5b0b83a012bb385 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 4.2E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_5468 a964290e3cd1918ea5b0b83a012bb385 223 Gene3D G3DSA:1.10.10.10 124 223 2.2E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1203 431f82f80cd45bbb378a77b80c5d1c30 770 SUPERFAMILY SSF56281 509 752 2.75E-41 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_1203 431f82f80cd45bbb378a77b80c5d1c30 770 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 193 748 1.7E-65 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 Amir_1203 431f82f80cd45bbb378a77b80c5d1c30 770 Pfam PF03772 Competence protein 216 481 2.1E-52 T 14-10-2018 IPR004477 ComEC/Rec2-related protein Amir_1203 431f82f80cd45bbb378a77b80c5d1c30 770 Gene3D G3DSA:3.60.15.10 514 754 1.1E-56 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_1203 431f82f80cd45bbb378a77b80c5d1c30 770 SMART SM00849 523 720 2.2E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_1203 431f82f80cd45bbb378a77b80c5d1c30 770 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 238 407 1.5E-20 T 14-10-2018 IPR004477 ComEC/Rec2-related protein Amir_1203 431f82f80cd45bbb378a77b80c5d1c30 770 Pfam PF00753 Metallo-beta-lactamase superfamily 521 697 3.5E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_4480 06558ca61b6ba9e89a3b2f23f4de79e1 444 SUPERFAMILY SSF48208 54 436 2.32E-60 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_4480 06558ca61b6ba9e89a3b2f23f4de79e1 444 Pfam PF03200 Glycosyl hydrolase family 63 C-terminal domain 318 397 4.0E-5 T 14-10-2018 IPR031335 Glycosyl hydrolase family 63, C-terminal KEGG: 00510+3.2.1.106|MetaCyc: PWY-7918|MetaCyc: PWY-7919|Reactome: R-HSA-4793954|Reactome: R-HSA-532668 Amir_4480 06558ca61b6ba9e89a3b2f23f4de79e1 444 Gene3D G3DSA:1.50.10.10 37 438 1.4E-80 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Amir_4989 b4367ab3f4b364bf7d579b7d768389df 145 SUPERFAMILY SSF50475 33 136 7.06E-5 T 14-10-2018 Amir_4989 b4367ab3f4b364bf7d579b7d768389df 145 Pfam PF04075 F420H(2)-dependent quinone reductase 14 142 2.4E-54 T 14-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 Amir_4989 b4367ab3f4b364bf7d579b7d768389df 145 TIGRFAM TIGR00026 hi_GC_TIGR00026: deazaflavin-dependent oxidoreductase, nitroreductase family 31 142 2.0E-37 T 14-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 Amir_4989 b4367ab3f4b364bf7d579b7d768389df 145 Gene3D G3DSA:2.30.110.10 1 143 4.4E-60 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_0202 4459bbb1e561b78947a578ea9d9b3e40 115 Gene3D G3DSA:3.30.1310.10 3 108 6.2E-35 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_0202 4459bbb1e561b78947a578ea9d9b3e40 115 Pfam PF02575 YbaB/EbfC DNA-binding family 13 101 3.4E-33 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_0202 4459bbb1e561b78947a578ea9d9b3e40 115 PIRSF PIRSF004555 4 112 1.0E-32 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_0202 4459bbb1e561b78947a578ea9d9b3e40 115 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 4 94 6.0E-23 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_0202 4459bbb1e561b78947a578ea9d9b3e40 115 SUPERFAMILY SSF82607 8 100 9.02E-28 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_0202 4459bbb1e561b78947a578ea9d9b3e40 115 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 6 100 20.509 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_1145 17dcb9c1e1f7da7dc333713e18990bf9 161 PIRSF PIRSF005384 7 155 2.0E-49 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Amir_1145 17dcb9c1e1f7da7dc333713e18990bf9 161 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 9 153 1.0E-55 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Amir_1145 17dcb9c1e1f7da7dc333713e18990bf9 161 TIGRFAM TIGR02133 RPI_actino: ribose 5-phosphate isomerase 7 154 1.2E-69 T 14-10-2018 IPR011860 Ribose 5-phosphate isomerase GO:0004751 Amir_1145 17dcb9c1e1f7da7dc333713e18990bf9 161 Pfam PF02502 Ribose/Galactose Isomerase 9 146 1.2E-47 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Amir_1145 17dcb9c1e1f7da7dc333713e18990bf9 161 SUPERFAMILY SSF89623 7 157 5.76E-53 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Amir_1145 17dcb9c1e1f7da7dc333713e18990bf9 161 Gene3D G3DSA:3.40.1400.10 4 161 1.8E-59 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Amir_4445 8799d4f403cbf74b4bee962cd371e845 521 Gene3D G3DSA:3.40.640.10 62 130 2.2E-7 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_4445 8799d4f403cbf74b4bee962cd371e845 521 Gene3D G3DSA:3.90.1150.10 388 492 9.0E-57 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_4445 8799d4f403cbf74b4bee962cd371e845 521 Gene3D G3DSA:3.90.1150.10 26 61 2.2E-7 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_4445 8799d4f403cbf74b4bee962cd371e845 521 SUPERFAMILY SSF53383 24 499 2.18E-69 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_4445 8799d4f403cbf74b4bee962cd371e845 521 Gene3D G3DSA:3.40.640.10 188 387 9.0E-57 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_4445 8799d4f403cbf74b4bee962cd371e845 521 Pfam PF00202 Aminotransferase class-III 24 496 5.4E-55 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_5119 1e750d4daff752b1df868f1a1a5ea56d 327 Pfam PF00296 Luciferase-like monooxygenase 21 302 3.0E-58 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_5119 1e750d4daff752b1df868f1a1a5ea56d 327 Gene3D G3DSA:3.20.20.30 12 326 1.9E-65 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_5119 1e750d4daff752b1df868f1a1a5ea56d 327 TIGRFAM TIGR03841 F420_Rv3093c: probable F420-dependent oxidoreductase, Rv3093c family 20 306 1.7E-95 T 14-10-2018 IPR022526 F420-dependent oxidoreductase, Rv3093c Amir_5119 1e750d4daff752b1df868f1a1a5ea56d 327 SUPERFAMILY SSF51679 13 323 1.83E-56 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_7037 eac8093e1e52a628cea85aa681c225cc 256 Pfam PF01261 Xylose isomerase-like TIM barrel 13 218 3.3E-29 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Amir_7037 eac8093e1e52a628cea85aa681c225cc 256 SUPERFAMILY SSF51658 1 252 2.23E-58 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Amir_7037 eac8093e1e52a628cea85aa681c225cc 256 SMART SM00518 2 254 1.9E-53 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Amir_7037 eac8093e1e52a628cea85aa681c225cc 256 Gene3D G3DSA:3.20.20.150 1 255 2.2E-59 T 14-10-2018 Amir_7037 eac8093e1e52a628cea85aa681c225cc 256 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 162 169 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Amir_7037 eac8093e1e52a628cea85aa681c225cc 256 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 56 64 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Amir_0013 47e565383497c69d51af4a34ef51490d 182 Gene3D G3DSA:2.40.100.10 11 180 3.8E-75 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Amir_0013 47e565383497c69d51af4a34ef51490d 182 SUPERFAMILY SSF50891 14 178 1.33E-62 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Amir_0013 47e565383497c69d51af4a34ef51490d 182 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 177 1.9E-46 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amir_0013 47e565383497c69d51af4a34ef51490d 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 2.0E-27 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amir_0013 47e565383497c69d51af4a34ef51490d 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 136 2.0E-27 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amir_0013 47e565383497c69d51af4a34ef51490d 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 2.0E-27 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amir_0013 47e565383497c69d51af4a34ef51490d 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 152 2.0E-27 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amir_0013 47e565383497c69d51af4a34ef51490d 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 124 2.0E-27 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amir_0013 47e565383497c69d51af4a34ef51490d 182 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Amir_0013 47e565383497c69d51af4a34ef51490d 182 PIRSF PIRSF001467 4 181 3.9E-59 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Amir_0200 b342ecc5285c50312bce43d9128f33c8 322 Gene3D G3DSA:3.40.50.1980 171 320 1.5E-31 T 14-10-2018 Amir_0200 b342ecc5285c50312bce43d9128f33c8 322 Pfam PF01497 Periplasmic binding protein 57 288 4.6E-21 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Amir_0200 b342ecc5285c50312bce43d9128f33c8 322 Gene3D G3DSA:3.40.50.1980 37 168 1.1E-39 T 14-10-2018 Amir_0200 b342ecc5285c50312bce43d9128f33c8 322 SUPERFAMILY SSF53807 35 292 6.28E-50 T 14-10-2018 Amir_6150 b4920f70219a55e8901fa50ac694ba4d 354 Gene3D G3DSA:3.30.70.1660 104 340 4.2E-92 T 14-10-2018 Amir_6150 b4920f70219a55e8901fa50ac694ba4d 354 Pfam PF00472 RF-1 domain 212 319 3.3E-39 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Amir_6150 b4920f70219a55e8901fa50ac694ba4d 354 Pfam PF03462 PCRF domain 10 201 7.3E-65 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Amir_6150 b4920f70219a55e8901fa50ac694ba4d 354 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 5 352 2.0E-146 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Amir_6150 b4920f70219a55e8901fa50ac694ba4d 354 SUPERFAMILY SSF75620 8 351 1.01E-125 T 14-10-2018 Amir_6150 b4920f70219a55e8901fa50ac694ba4d 354 SMART SM00937 63 176 2.0E-52 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Amir_6150 b4920f70219a55e8901fa50ac694ba4d 354 Gene3D G3DSA:3.30.160.20 208 295 4.2E-92 T 14-10-2018 Amir_6150 b4920f70219a55e8901fa50ac694ba4d 354 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Amir_6150 b4920f70219a55e8901fa50ac694ba4d 354 Gene3D G3DSA:1.20.58.410 3 97 2.8E-10 T 14-10-2018 Amir_6150 b4920f70219a55e8901fa50ac694ba4d 354 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 354 37.142 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Amir_6886 e035e9ffce9369369e88429230957361 254 SMART SM00382 35 222 9.9E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6886 e035e9ffce9369369e88429230957361 254 Pfam PF00005 ABC transporter 26 174 2.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6886 e035e9ffce9369369e88429230957361 254 Gene3D G3DSA:3.40.50.300 9 253 1.8E-77 T 14-10-2018 Amir_6886 e035e9ffce9369369e88429230957361 254 SUPERFAMILY SSF52540 11 244 3.96E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6886 e035e9ffce9369369e88429230957361 254 PIRSF PIRSF039085 7 250 1.8E-98 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Amir_6886 e035e9ffce9369369e88429230957361 254 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3162 0db64179e1a754f0930521bf5002b128 738 Gene3D G3DSA:1.20.1640.10 257 341 1.4E-5 T 14-10-2018 Amir_3162 0db64179e1a754f0930521bf5002b128 738 SUPERFAMILY SSF82866 452 686 2.88E-27 T 14-10-2018 Amir_3162 0db64179e1a754f0930521bf5002b128 738 SUPERFAMILY SSF82866 125 335 9.16E-31 T 14-10-2018 Amir_3162 0db64179e1a754f0930521bf5002b128 738 Gene3D G3DSA:1.20.1640.10 477 682 8.2E-7 T 14-10-2018 Amir_3162 0db64179e1a754f0930521bf5002b128 738 Gene3D G3DSA:1.20.1640.10 342 396 1.4E-5 T 14-10-2018 Amir_3162 0db64179e1a754f0930521bf5002b128 738 Pfam PF03176 MMPL family 440 690 1.1E-35 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Amir_3162 0db64179e1a754f0930521bf5002b128 738 Pfam PF03176 MMPL family 45 366 8.5E-63 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Amir_5324 bcba89d7bc6731c5f1b431e02771fce7 675 Pfam PF01757 Acyltransferase family 22 337 5.6E-23 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Amir_0916 72a7970b9732a37e1d3d17e820f8c611 236 Gene3D G3DSA:3.40.50.1000 85 235 1.2E-22 T 14-10-2018 IPR023214 HAD superfamily Amir_0916 72a7970b9732a37e1d3d17e820f8c611 236 Pfam PF13419 Haloacid dehalogenase-like hydrolase 93 204 1.5E-11 T 14-10-2018 Amir_0916 72a7970b9732a37e1d3d17e820f8c611 236 SUPERFAMILY SSF56784 17 234 4.13E-25 T 14-10-2018 IPR036412 HAD-like superfamily Amir_0119 5ed8a66eb989bd4bad9575fb65a18493 395 SUPERFAMILY SSF51905 6 284 5.61E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0119 5ed8a66eb989bd4bad9575fb65a18493 395 Pfam PF01266 FAD dependent oxidoreductase 6 391 1.9E-65 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Amir_6049 2608913dcefe5341a7d7be1219ddfb47 256 Gene3D G3DSA:3.40.630.30 24 174 8.9E-27 T 14-10-2018 Amir_6049 2608913dcefe5341a7d7be1219ddfb47 256 SUPERFAMILY SSF55729 21 227 6.37E-43 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_6049 2608913dcefe5341a7d7be1219ddfb47 256 Pfam PF13444 Acetyltransferase (GNAT) domain 37 138 1.3E-34 T 14-10-2018 Amir_5131 2aca65d055640ac29a15d2a9ee19b1e2 648 Gene3D G3DSA:1.20.1560.10 5 339 1.5E-78 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_5131 2aca65d055640ac29a15d2a9ee19b1e2 648 Pfam PF00005 ABC transporter 387 536 1.8E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5131 2aca65d055640ac29a15d2a9ee19b1e2 648 SUPERFAMILY SSF52540 349 606 2.72E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5131 2aca65d055640ac29a15d2a9ee19b1e2 648 ProSitePatterns PS00211 ABC transporters family signature. 508 522 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_5131 2aca65d055640ac29a15d2a9ee19b1e2 648 SUPERFAMILY SSF90123 20 342 7.06E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amir_5131 2aca65d055640ac29a15d2a9ee19b1e2 648 Pfam PF00664 ABC transporter transmembrane region 34 304 1.3E-42 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amir_5131 2aca65d055640ac29a15d2a9ee19b1e2 648 SMART SM00382 396 582 4.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5131 2aca65d055640ac29a15d2a9ee19b1e2 648 Gene3D G3DSA:3.40.50.300 350 615 1.8E-82 T 14-10-2018 Amir_1253 985246b62e6e530ff81576a09daa5330 114 SUPERFAMILY SSF52833 3 99 7.27E-5 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_4285 a7e7e2608b2356425901ee7d2dd5da19 444 Pfam PF07690 Major Facilitator Superfamily 224 409 3.0E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_4285 a7e7e2608b2356425901ee7d2dd5da19 444 Gene3D G3DSA:1.20.1250.20 3 192 8.9E-11 T 14-10-2018 Amir_4285 a7e7e2608b2356425901ee7d2dd5da19 444 Gene3D G3DSA:1.20.1250.20 217 426 2.4E-13 T 14-10-2018 Amir_4285 a7e7e2608b2356425901ee7d2dd5da19 444 SUPERFAMILY SSF103473 7 407 2.62E-35 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_6398 6ad8ad1e97145067f673875027f0ed95 291 Pfam PF00702 haloacid dehalogenase-like hydrolase 60 177 1.7E-9 T 14-10-2018 Amir_6398 6ad8ad1e97145067f673875027f0ed95 291 Gene3D G3DSA:3.40.50.1000 5 195 2.5E-26 T 14-10-2018 IPR023214 HAD superfamily Amir_6398 6ad8ad1e97145067f673875027f0ed95 291 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 89 179 2.3E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_6398 6ad8ad1e97145067f673875027f0ed95 291 SUPERFAMILY SSF56784 5 191 1.53E-25 T 14-10-2018 IPR036412 HAD-like superfamily Amir_0805 78145c115e9111eeeaa85db32326db64 319 SUPERFAMILY SSF51621 6 252 1.88E-63 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Amir_0805 78145c115e9111eeeaa85db32326db64 319 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 10 241 1.2E-44 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 Amir_0805 78145c115e9111eeeaa85db32326db64 319 PIRSF PIRSF015582 1 318 2.1E-87 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like Amir_0805 78145c115e9111eeeaa85db32326db64 319 Gene3D G3DSA:3.20.20.60 1 310 4.2E-93 T 14-10-2018 Amir_4218 cdf95f17e02badf3af7b976b0665f49d 300 SUPERFAMILY SSF46785 2 82 4.24E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4218 cdf95f17e02badf3af7b976b0665f49d 300 Pfam PF03466 LysR substrate binding domain 108 290 1.4E-20 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_4218 cdf95f17e02badf3af7b976b0665f49d 300 SUPERFAMILY SSF53850 89 289 5.43E-35 T 14-10-2018 Amir_4218 cdf95f17e02badf3af7b976b0665f49d 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.1E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4218 cdf95f17e02badf3af7b976b0665f49d 300 Gene3D G3DSA:1.10.10.10 2 83 7.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4218 cdf95f17e02badf3af7b976b0665f49d 300 Gene3D G3DSA:3.40.190.10 89 288 3.0E-49 T 14-10-2018 Amir_4218 cdf95f17e02badf3af7b976b0665f49d 300 Gene3D G3DSA:3.40.190.10 166 264 3.0E-49 T 14-10-2018 Amir_3298 c82dc257ea5cc12100c0146c30148583 137 Gene3D G3DSA:3.40.630.30 6 137 1.2E-31 T 14-10-2018 Amir_3298 c82dc257ea5cc12100c0146c30148583 137 Pfam PF13673 Acetyltransferase (GNAT) domain 40 127 1.1E-11 T 14-10-2018 IPR000182 GNAT domain Amir_3298 c82dc257ea5cc12100c0146c30148583 137 SUPERFAMILY SSF55729 10 127 2.03E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_4855 c80ce2d6b48b94ee6e6bde39edd5e66c 165 Pfam PF13276 HTH-like domain 95 147 1.4E-13 T 14-10-2018 IPR025948 HTH-like domain Amir_3348 de17a1a733666db34df6267d66b57aa9 265 SUPERFAMILY SSF53474 1 254 7.4E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3348 de17a1a733666db34df6267d66b57aa9 265 PRINTS PR00412 Epoxide hydrolase signature 81 94 1.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_3348 de17a1a733666db34df6267d66b57aa9 265 PRINTS PR00412 Epoxide hydrolase signature 231 253 1.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_3348 de17a1a733666db34df6267d66b57aa9 265 PRINTS PR00412 Epoxide hydrolase signature 37 52 1.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_3348 de17a1a733666db34df6267d66b57aa9 265 PRINTS PR00412 Epoxide hydrolase signature 198 214 1.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_3348 de17a1a733666db34df6267d66b57aa9 265 Pfam PF12697 Alpha/beta hydrolase family 12 246 4.4E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_3348 de17a1a733666db34df6267d66b57aa9 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 81 94 1.1E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_3348 de17a1a733666db34df6267d66b57aa9 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 1.1E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_3348 de17a1a733666db34df6267d66b57aa9 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 37 52 1.1E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_3348 de17a1a733666db34df6267d66b57aa9 265 Gene3D G3DSA:3.40.50.1820 1 259 1.7E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4173 1c71ad5caa27c1bc0e29613d0f220e19 249 SUPERFAMILY SSF52317 4 205 2.52E-32 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_4173 1c71ad5caa27c1bc0e29613d0f220e19 249 Pfam PF03575 Peptidase family S51 3 201 5.2E-54 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 Amir_4173 1c71ad5caa27c1bc0e29613d0f220e19 249 Gene3D G3DSA:3.40.50.880 1 235 1.1E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_1385 b976679d8e8b3fdd11af512a99ffa8e7 262 SUPERFAMILY SSF56300 2 253 1.28E-32 T 14-10-2018 Amir_1385 b976679d8e8b3fdd11af512a99ffa8e7 262 Pfam PF00149 Calcineurin-like phosphoesterase 2 233 5.7E-6 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amir_3847 c36a36847ba26b7dd6f823299f4bb221 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 301 1.1E-30 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amir_3847 c36a36847ba26b7dd6f823299f4bb221 346 Gene3D G3DSA:3.40.50.1100 54 145 1.7E-49 T 14-10-2018 Amir_3847 c36a36847ba26b7dd6f823299f4bb221 346 SUPERFAMILY SSF53686 20 319 3.14E-50 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amir_3847 c36a36847ba26b7dd6f823299f4bb221 346 Gene3D G3DSA:3.40.50.1100 24 305 1.7E-49 T 14-10-2018 Amir_0126 3234ebd24f2da5a8393e04bb486e3f39 543 SUPERFAMILY SSF53756 184 513 3.18E-36 T 14-10-2018 Amir_0126 3234ebd24f2da5a8393e04bb486e3f39 543 Pfam PF00534 Glycosyl transferases group 1 356 511 5.0E-18 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Amir_0126 3234ebd24f2da5a8393e04bb486e3f39 543 Gene3D G3DSA:3.40.50.2000 194 351 4.9E-30 T 14-10-2018 Amir_0126 3234ebd24f2da5a8393e04bb486e3f39 543 Gene3D G3DSA:3.40.50.2000 352 511 4.9E-30 T 14-10-2018 Amir_4188 fdf77deaefb2f2810175c1afe251379a 298 Gene3D G3DSA:1.10.260.40 23 97 7.0E-7 T 14-10-2018 Amir_4188 fdf77deaefb2f2810175c1afe251379a 298 Pfam PF13560 Helix-turn-helix domain 8 86 1.1E-14 T 14-10-2018 Amir_4188 fdf77deaefb2f2810175c1afe251379a 298 SMART SM00530 11 83 1.5E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_4188 fdf77deaefb2f2810175c1afe251379a 298 SUPERFAMILY SSF47413 30 82 2.91E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_6425 2f462145cbc538551b4ff8e21fe15002 131 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.6E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6425 2f462145cbc538551b4ff8e21fe15002 131 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.6E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6425 2f462145cbc538551b4ff8e21fe15002 131 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 1.6E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6425 2f462145cbc538551b4ff8e21fe15002 131 Pfam PF13411 MerR HTH family regulatory protein 4 70 2.4E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6425 2f462145cbc538551b4ff8e21fe15002 131 SUPERFAMILY SSF46955 4 117 2.16E-32 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_6425 2f462145cbc538551b4ff8e21fe15002 131 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6425 2f462145cbc538551b4ff8e21fe15002 131 SMART SM00422 3 72 5.3E-23 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_6425 2f462145cbc538551b4ff8e21fe15002 131 Gene3D G3DSA:1.10.1660.10 2 123 2.2E-33 T 14-10-2018 Amir_6428 569ced7159c7ff8b8a2a79165d40b9d2 217 SUPERFAMILY SSF46689 22 95 4.36E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_6428 569ced7159c7ff8b8a2a79165d40b9d2 217 Gene3D G3DSA:1.10.357.10 18 216 2.7E-44 T 14-10-2018 Amir_6428 569ced7159c7ff8b8a2a79165d40b9d2 217 Pfam PF13305 WHG domain 107 191 2.9E-14 T 14-10-2018 IPR025996 WHG domain Amir_6428 569ced7159c7ff8b8a2a79165d40b9d2 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 80 4.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6428 569ced7159c7ff8b8a2a79165d40b9d2 217 SUPERFAMILY SSF48498 103 211 5.84E-23 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_5214 622c27ab2a29b507b8cc3307184a9ede 165 Gene3D G3DSA:1.10.10.10 76 159 3.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5214 622c27ab2a29b507b8cc3307184a9ede 165 SUPERFAMILY SSF88659 94 155 2.24E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5214 622c27ab2a29b507b8cc3307184a9ede 165 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 32 62 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_5214 622c27ab2a29b507b8cc3307184a9ede 165 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 3 156 5.3E-51 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 Amir_5214 622c27ab2a29b507b8cc3307184a9ede 165 SUPERFAMILY SSF88946 5 90 2.63E-14 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5214 622c27ab2a29b507b8cc3307184a9ede 165 Pfam PF04542 Sigma-70 region 2 11 75 1.0E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5214 622c27ab2a29b507b8cc3307184a9ede 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 155 1.1E-26 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_5214 622c27ab2a29b507b8cc3307184a9ede 165 Pfam PF04545 Sigma-70, region 4 105 154 1.4E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amir_5214 622c27ab2a29b507b8cc3307184a9ede 165 Gene3D G3DSA:1.10.1740.10 1 75 2.9E-13 T 14-10-2018 Amir_2186 693c3ac10d6cdf0e2453c1a2bbf6e66f 204 Pfam PF12079 Protein of unknown function (DUF3558) 16 200 7.8E-23 T 14-10-2018 IPR024520 Protein of unknown function DUF3558 Amir_6897 9102e48814a24bb4b2bc218995b83dff 388 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 226 239 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Amir_6897 9102e48814a24bb4b2bc218995b83dff 388 Pfam PF00155 Aminotransferase class I and II 31 376 1.5E-58 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_6897 9102e48814a24bb4b2bc218995b83dff 388 Gene3D G3DSA:3.40.640.10 3 383 8.4E-128 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_6897 9102e48814a24bb4b2bc218995b83dff 388 SUPERFAMILY SSF53383 7 381 4.44E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_6897 9102e48814a24bb4b2bc218995b83dff 388 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 92 112 1.4E-11 T 14-10-2018 Amir_6897 9102e48814a24bb4b2bc218995b83dff 388 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 114 135 1.4E-11 T 14-10-2018 Amir_6897 9102e48814a24bb4b2bc218995b83dff 388 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 194 217 1.4E-11 T 14-10-2018 Amir_6897 9102e48814a24bb4b2bc218995b83dff 388 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 158 182 1.4E-11 T 14-10-2018 Amir_3280 4e1ea5454ae4551fd2df7ccc96786bc3 91 Gene3D G3DSA:1.10.1200.10 10 89 1.2E-17 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3280 4e1ea5454ae4551fd2df7ccc96786bc3 91 Pfam PF00550 Phosphopantetheine attachment site 19 83 7.3E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3280 4e1ea5454ae4551fd2df7ccc96786bc3 91 SUPERFAMILY SSF47336 16 89 5.23E-13 T 14-10-2018 IPR036736 ACP-like superfamily Amir_5137 ef0e0156dfa47a8ff0e22a855ae9a32a 171 SUPERFAMILY SSF88659 95 157 1.27E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_5137 ef0e0156dfa47a8ff0e22a855ae9a32a 171 Gene3D G3DSA:1.10.10.10 77 159 2.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5137 ef0e0156dfa47a8ff0e22a855ae9a32a 171 Pfam PF08281 Sigma-70, region 4 101 152 3.3E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_5137 ef0e0156dfa47a8ff0e22a855ae9a32a 171 Gene3D G3DSA:1.10.1740.10 2 76 2.3E-10 T 14-10-2018 Amir_5137 ef0e0156dfa47a8ff0e22a855ae9a32a 171 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 5 157 1.0E-43 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 Amir_5137 ef0e0156dfa47a8ff0e22a855ae9a32a 171 Pfam PF04542 Sigma-70 region 2 19 78 1.4E-8 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5137 ef0e0156dfa47a8ff0e22a855ae9a32a 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 156 1.7E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_5137 ef0e0156dfa47a8ff0e22a855ae9a32a 171 SUPERFAMILY SSF88946 6 89 8.24E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_5027 d203dd0c947705a2d8c0d4623bbda365 344 Gene3D G3DSA:3.90.180.10 12 338 1.2E-113 T 14-10-2018 Amir_5027 d203dd0c947705a2d8c0d4623bbda365 344 Gene3D G3DSA:3.40.50.720 157 310 1.2E-113 T 14-10-2018 Amir_5027 d203dd0c947705a2d8c0d4623bbda365 344 SUPERFAMILY SSF51735 146 308 1.15E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5027 d203dd0c947705a2d8c0d4623bbda365 344 Pfam PF00107 Zinc-binding dehydrogenase 183 304 1.5E-16 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amir_5027 d203dd0c947705a2d8c0d4623bbda365 344 SUPERFAMILY SSF50129 12 169 1.45E-43 T 14-10-2018 IPR011032 GroES-like superfamily Amir_5027 d203dd0c947705a2d8c0d4623bbda365 344 SMART SM00829 11 338 3.0E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_5027 d203dd0c947705a2d8c0d4623bbda365 344 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amir_5027 d203dd0c947705a2d8c0d4623bbda365 344 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 140 5.3E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_3107 701350f724760e48501ad0b581cff2b5 771 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 626 708 1.8E-17 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3107 701350f724760e48501ad0b581cff2b5 771 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 716 771 3.1E-10 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3107 701350f724760e48501ad0b581cff2b5 771 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 54 571 3.6E-144 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 Amir_3107 701350f724760e48501ad0b581cff2b5 771 Gene3D G3DSA:2.80.10.50 581 676 6.4E-10 T 14-10-2018 Amir_3107 701350f724760e48501ad0b581cff2b5 771 Gene3D G3DSA:2.80.10.50 677 767 1.3E-23 T 14-10-2018 Amir_3107 701350f724760e48501ad0b581cff2b5 771 SUPERFAMILY SSF48208 112 409 5.02E-13 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_3107 701350f724760e48501ad0b581cff2b5 771 SUPERFAMILY SSF50370 632 768 1.9E-38 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_3495 517fdfbc62c1155ec4bac68aa945530d 495 Gene3D G3DSA:2.60.40.290 40 148 2.1E-32 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_3495 517fdfbc62c1155ec4bac68aa945530d 495 Gene3D G3DSA:2.60.120.260 166 266 2.4E-32 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_3495 517fdfbc62c1155ec4bac68aa945530d 495 SUPERFAMILY SSF52266 273 489 7.83E-17 T 14-10-2018 Amir_3495 517fdfbc62c1155ec4bac68aa945530d 495 Pfam PF00553 Cellulose binding domain 46 145 1.3E-27 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_3495 517fdfbc62c1155ec4bac68aa945530d 495 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 282 437 1.2E-12 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_3495 517fdfbc62c1155ec4bac68aa945530d 495 ProSitePatterns PS00561 CBM2a (carbohydrate-binding type-2) domain signature. 110 123 - T 14-10-2018 IPR018366 Carbohydrate-binding type-2, conserved site GO:0004553|GO:0005975|GO:0030246 Amir_3495 517fdfbc62c1155ec4bac68aa945530d 495 SUPERFAMILY SSF49384 42 146 6.07E-28 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_3495 517fdfbc62c1155ec4bac68aa945530d 495 Gene3D G3DSA:3.40.50.1110 274 492 1.1E-50 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_3495 517fdfbc62c1155ec4bac68aa945530d 495 SMART SM00637 46 145 1.6E-41 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_0284 5417abd2f5ec798e6dd78990710e7557 786 PIRSF PIRSF001265 14 724 2.2E-248 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amir_0284 5417abd2f5ec798e6dd78990710e7557 786 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 22 716 1.0E-205 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amir_0284 5417abd2f5ec798e6dd78990710e7557 786 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 17 715 24.094 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amir_0284 5417abd2f5ec798e6dd78990710e7557 786 Pfam PF03030 Inorganic H+ pyrophosphatase 29 710 6.2E-238 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amir_5203 273d0ae5745c55f6f556290976fa6efb 328 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 304 1.4E-104 T 14-10-2018 IPR033981 Sporulation regulator WhiA-like Amir_5203 273d0ae5745c55f6f556290976fa6efb 328 Pfam PF02650 WhiA C-terminal HTH domain 221 303 7.4E-19 T 14-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal Amir_5203 273d0ae5745c55f6f556290976fa6efb 328 Gene3D G3DSA:1.10.10.10 216 307 2.1E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5203 273d0ae5745c55f6f556290976fa6efb 328 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 20 104 9.4E-25 T 14-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain Amir_5203 273d0ae5745c55f6f556290976fa6efb 328 Gene3D G3DSA:3.10.28.10 2 214 1.1E-18 T 14-10-2018 IPR027434 Homing endonuclease Amir_5203 273d0ae5745c55f6f556290976fa6efb 328 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 306 29.001 T 14-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 Amir_5203 273d0ae5745c55f6f556290976fa6efb 328 Pfam PF14527 WhiA LAGLIDADG-like domain 127 218 7.3E-24 T 14-10-2018 IPR039518 WhiA, LAGLIDADG-like domain Amir_5325 d42d115be537db6138c25b44e3dbfb30 298 Pfam PF09754 PAC2 family 27 242 1.5E-42 T 14-10-2018 IPR019151 Proteasome assembly chaperone 2 Amir_5325 d42d115be537db6138c25b44e3dbfb30 298 Gene3D G3DSA:3.40.50.10900 2 222 2.6E-69 T 14-10-2018 IPR038389 Proteasome assembly chaperone 2 superfamily Amir_5325 d42d115be537db6138c25b44e3dbfb30 298 SUPERFAMILY SSF159659 6 266 2.35E-83 T 14-10-2018 Amir_5325 d42d115be537db6138c25b44e3dbfb30 298 PIRSF PIRSF028754 6 298 9.3E-94 T 14-10-2018 IPR008492 Protein of unknown function DUF774 Amir_5325 d42d115be537db6138c25b44e3dbfb30 298 Gene3D G3DSA:1.10.287.100 226 266 2.6E-14 T 14-10-2018 Amir_2054 5f065e4b87fe1c60b990a9448d39da53 378 Gene3D G3DSA:3.40.190.10 166 285 3.2E-31 T 14-10-2018 Amir_2054 5f065e4b87fe1c60b990a9448d39da53 378 SUPERFAMILY SSF53850 61 344 1.09E-40 T 14-10-2018 Amir_2054 5f065e4b87fe1c60b990a9448d39da53 378 Gene3D G3DSA:3.40.190.10 78 336 3.2E-31 T 14-10-2018 Amir_2054 5f065e4b87fe1c60b990a9448d39da53 378 Pfam PF13343 Bacterial extracellular solute-binding protein 129 332 2.1E-25 T 14-10-2018 Amir_6230 4e968bfc5cf635a9bfdab64f38a21da9 533 Pfam PF01039 Carboxyl transferase domain 50 522 1.0E-151 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Amir_6230 4e968bfc5cf635a9bfdab64f38a21da9 533 SUPERFAMILY SSF52096 27 272 2.26E-68 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_6230 4e968bfc5cf635a9bfdab64f38a21da9 533 Gene3D G3DSA:3.90.226.10 275 533 1.8E-103 T 14-10-2018 Amir_6230 4e968bfc5cf635a9bfdab64f38a21da9 533 SUPERFAMILY SSF52096 239 515 1.24E-88 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_6230 4e968bfc5cf635a9bfdab64f38a21da9 533 Gene3D G3DSA:3.90.226.10 13 273 1.7E-94 T 14-10-2018 Amir_0491 5893a73445e6c23fd61235aa28ae2295 424 Gene3D G3DSA:1.20.1250.20 20 404 1.3E-34 T 14-10-2018 Amir_0491 5893a73445e6c23fd61235aa28ae2295 424 SUPERFAMILY SSF103473 22 407 6.02E-40 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_0491 5893a73445e6c23fd61235aa28ae2295 424 Pfam PF05977 Transmembrane secretion effector 14 418 7.7E-53 T 14-10-2018 IPR010290 Transmembrane secretion effector Amir_3080 ca26dab6cd67d5caeb4fc030c0d7c806 440 Gene3D G3DSA:3.40.710.10 80 420 5.7E-51 T 14-10-2018 Amir_3080 ca26dab6cd67d5caeb4fc030c0d7c806 440 SUPERFAMILY SSF56601 81 420 3.43E-49 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_3080 ca26dab6cd67d5caeb4fc030c0d7c806 440 Pfam PF00144 Beta-lactamase 83 416 1.9E-37 T 14-10-2018 IPR001466 Beta-lactamase-related Amir_2009 cc4222144285ab845f09fc507ee2e068 395 Gene3D G3DSA:3.30.565.10 278 395 3.0E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2009 cc4222144285ab845f09fc507ee2e068 395 Pfam PF07730 Histidine kinase 207 269 1.8E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_2009 cc4222144285ab845f09fc507ee2e068 395 SUPERFAMILY SSF55874 292 394 1.74E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5862 9b89e186b82e57642b6c0a62d1254b61 297 Pfam PF00106 short chain dehydrogenase 16 206 1.7E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5862 9b89e186b82e57642b6c0a62d1254b61 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 2.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5862 9b89e186b82e57642b6c0a62d1254b61 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 2.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5862 9b89e186b82e57642b6c0a62d1254b61 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 2.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5862 9b89e186b82e57642b6c0a62d1254b61 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5862 9b89e186b82e57642b6c0a62d1254b61 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5862 9b89e186b82e57642b6c0a62d1254b61 297 Gene3D G3DSA:3.40.50.720 1 292 3.4E-90 T 14-10-2018 Amir_5862 9b89e186b82e57642b6c0a62d1254b61 297 SUPERFAMILY SSF51735 12 239 3.32E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5862 9b89e186b82e57642b6c0a62d1254b61 297 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5862 9b89e186b82e57642b6c0a62d1254b61 297 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5862 9b89e186b82e57642b6c0a62d1254b61 297 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 1.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0133 f5e740405cbf6712d3a56b509b414716 271 Pfam PF00005 ABC transporter 47 177 1.3E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0133 f5e740405cbf6712d3a56b509b414716 271 Gene3D G3DSA:3.40.50.300 37 268 1.2E-41 T 14-10-2018 Amir_0133 f5e740405cbf6712d3a56b509b414716 271 SMART SM00382 56 234 1.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0133 f5e740405cbf6712d3a56b509b414716 271 SUPERFAMILY SSF52540 45 241 2.89E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5993 7aa30fcd94545e06b7961a1279989b97 64 Pfam PF04149 Domain of unknown function (DUF397) 11 61 8.0E-17 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_4666 8c963b1515e7e7915efccf6cfcf8a4b8 75 Gene3D G3DSA:3.40.50.12740 2 73 8.3E-16 T 14-10-2018 Amir_4666 8c963b1515e7e7915efccf6cfcf8a4b8 75 SUPERFAMILY SSF52172 2 72 3.42E-14 T 14-10-2018 IPR011006 CheY-like superfamily Amir_4666 8c963b1515e7e7915efccf6cfcf8a4b8 75 Pfam PF00072 Response regulator receiver domain 7 72 9.1E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4122 c9e9654ec0171d9554f07a74fcf0c378 608 SUPERFAMILY SSF51905 289 418 8.37E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4122 c9e9654ec0171d9554f07a74fcf0c378 608 SUPERFAMILY SSF51905 7 260 6.29E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4122 c9e9654ec0171d9554f07a74fcf0c378 608 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 218 236 3.7E-8 T 14-10-2018 Amir_4122 c9e9654ec0171d9554f07a74fcf0c378 608 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 3.7E-8 T 14-10-2018 Amir_4122 c9e9654ec0171d9554f07a74fcf0c378 608 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 3.7E-8 T 14-10-2018 Amir_4122 c9e9654ec0171d9554f07a74fcf0c378 608 Gene3D G3DSA:3.50.50.60 4 479 2.6E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4122 c9e9654ec0171d9554f07a74fcf0c378 608 Pfam PF13454 FAD-NAD(P)-binding 12 179 3.6E-30 T 14-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain Amir_2180 7bc644f61c0419fa78a80120941b4558 234 SUPERFAMILY SSF51735 3 230 4.6E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2180 7bc644f61c0419fa78a80120941b4558 234 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 176 2.6E-6 T 14-10-2018 Amir_2180 7bc644f61c0419fa78a80120941b4558 234 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 127 155 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_2180 7bc644f61c0419fa78a80120941b4558 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.0E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2180 7bc644f61c0419fa78a80120941b4558 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 4.0E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2180 7bc644f61c0419fa78a80120941b4558 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 4.0E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2180 7bc644f61c0419fa78a80120941b4558 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 214 4.0E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2180 7bc644f61c0419fa78a80120941b4558 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 4.0E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2180 7bc644f61c0419fa78a80120941b4558 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 4.0E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2180 7bc644f61c0419fa78a80120941b4558 234 Gene3D G3DSA:3.40.50.720 2 234 8.7E-80 T 14-10-2018 Amir_2180 7bc644f61c0419fa78a80120941b4558 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 230 6.7E-58 T 14-10-2018 Amir_2180 7bc644f61c0419fa78a80120941b4558 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 120 128 6.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2180 7bc644f61c0419fa78a80120941b4558 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 159 6.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2180 7bc644f61c0419fa78a80120941b4558 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 67 78 6.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5471 a0f3f168874d1ff0a127eaf1d4bc0a85 129 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.1E-37 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5471 a0f3f168874d1ff0a127eaf1d4bc0a85 129 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.1E-37 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5471 a0f3f168874d1ff0a127eaf1d4bc0a85 129 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.1E-37 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5471 a0f3f168874d1ff0a127eaf1d4bc0a85 129 Gene3D G3DSA:1.10.720.90 2 56 2.2E-18 T 14-10-2018 Amir_5471 a0f3f168874d1ff0a127eaf1d4bc0a85 129 SUPERFAMILY SSF74731 3 117 1.57E-45 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5471 a0f3f168874d1ff0a127eaf1d4bc0a85 129 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 2 114 5.0E-44 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5471 a0f3f168874d1ff0a127eaf1d4bc0a85 129 Pfam PF00453 Ribosomal protein L20 3 108 2.2E-44 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5471 a0f3f168874d1ff0a127eaf1d4bc0a85 129 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5471 a0f3f168874d1ff0a127eaf1d4bc0a85 129 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 1.0E-19 T 14-10-2018 Amir_5471 a0f3f168874d1ff0a127eaf1d4bc0a85 129 Gene3D G3DSA:1.10.1900.20 57 117 9.3E-28 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_5471 a0f3f168874d1ff0a127eaf1d4bc0a85 129 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 28.247 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_0374 42108a5588368012782f5f7e53f308d4 325 SMART SM00418 249 324 3.7E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_0374 42108a5588368012782f5f7e53f308d4 325 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 297 312 2.1E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_0374 42108a5588368012782f5f7e53f308d4 325 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 282 297 2.1E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_0374 42108a5588368012782f5f7e53f308d4 325 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 251 266 2.1E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_0374 42108a5588368012782f5f7e53f308d4 325 Pfam PF12840 Helix-turn-helix domain 253 306 6.5E-10 T 14-10-2018 Amir_0374 42108a5588368012782f5f7e53f308d4 325 SUPERFAMILY SSF46785 234 314 2.58E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0374 42108a5588368012782f5f7e53f308d4 325 Gene3D G3DSA:1.10.10.10 241 323 1.3E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4515 a25bbc97bb45ea1375513674935b2274 378 Gene3D G3DSA:2.40.10.10 264 363 8.2E-68 T 14-10-2018 Amir_4515 a25bbc97bb45ea1375513674935b2274 378 Gene3D G3DSA:3.30.300.50 36 119 3.1E-8 T 14-10-2018 IPR035070 Streptogrisin prodomain Amir_4515 a25bbc97bb45ea1375513674935b2274 378 PIRSF PIRSF001134 3 378 6.3E-118 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_4515 a25bbc97bb45ea1375513674935b2274 378 SUPERFAMILY SSF50494 199 370 2.87E-33 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_4515 a25bbc97bb45ea1375513674935b2274 378 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 317 340 1.4E-38 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_4515 a25bbc97bb45ea1375513674935b2274 378 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 216 230 1.4E-38 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_4515 a25bbc97bb45ea1375513674935b2274 378 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 298 315 1.4E-38 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_4515 a25bbc97bb45ea1375513674935b2274 378 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 341 355 1.4E-38 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_4515 a25bbc97bb45ea1375513674935b2274 378 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 277 297 1.4E-38 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_4515 a25bbc97bb45ea1375513674935b2274 378 Pfam PF02983 Alpha-lytic protease prodomain 121 172 1.1E-9 T 14-10-2018 IPR004236 Peptidase S1A, alpha-lytic prodomain GO:0005576|GO:0006508|GO:0008236 Amir_4515 a25bbc97bb45ea1375513674935b2274 378 Gene3D G3DSA:2.40.10.10 195 374 8.2E-68 T 14-10-2018 Amir_4515 a25bbc97bb45ea1375513674935b2274 378 Pfam PF00089 Trypsin 249 368 4.7E-10 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_6914 a57244e093a41793ca4895eed1662601 359 Pfam PF13515 Fusaric acid resistance protein-like 34 153 5.6E-13 T 14-10-2018 Amir_3051 873dc00f51891ff121330eb32db108e3 285 Gene3D G3DSA:3.40.190.290 90 282 4.0E-38 T 14-10-2018 Amir_3051 873dc00f51891ff121330eb32db108e3 285 SUPERFAMILY SSF53850 89 279 7.24E-37 T 14-10-2018 Amir_3051 873dc00f51891ff121330eb32db108e3 285 Pfam PF03466 LysR substrate binding domain 88 279 9.9E-38 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_3051 873dc00f51891ff121330eb32db108e3 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.7E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3051 873dc00f51891ff121330eb32db108e3 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3051 873dc00f51891ff121330eb32db108e3 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3051 873dc00f51891ff121330eb32db108e3 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3051 873dc00f51891ff121330eb32db108e3 285 SUPERFAMILY SSF46785 1 84 2.4E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3051 873dc00f51891ff121330eb32db108e3 285 Gene3D G3DSA:1.10.10.10 1 83 4.1E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0058 f6fee0f32f238d2d978a4b062ae9e9b0 354 Gene3D G3DSA:3.40.50.150 33 188 1.1E-31 T 14-10-2018 Amir_0058 f6fee0f32f238d2d978a4b062ae9e9b0 354 Pfam PF08241 Methyltransferase domain 63 159 2.4E-21 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_0058 f6fee0f32f238d2d978a4b062ae9e9b0 354 SUPERFAMILY SSF53335 57 177 1.34E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_4105 1c93c38c3cbe9540c1c5edbd03c850af 232 SUPERFAMILY SSF48498 85 191 2.27E-21 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4105 1c93c38c3cbe9540c1c5edbd03c850af 232 Gene3D G3DSA:1.10.357.10 7 194 1.1E-39 T 14-10-2018 Amir_4105 1c93c38c3cbe9540c1c5edbd03c850af 232 Pfam PF13305 WHG domain 88 172 4.2E-12 T 14-10-2018 IPR025996 WHG domain Amir_4105 1c93c38c3cbe9540c1c5edbd03c850af 232 SUPERFAMILY SSF46689 4 85 2.34E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4105 1c93c38c3cbe9540c1c5edbd03c850af 232 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 1.6E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2569 3e30c0cfe662379e1e7ab5a3dbb2e2fb 227 SUPERFAMILY SSF53448 5 203 1.88E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_2569 3e30c0cfe662379e1e7ab5a3dbb2e2fb 227 Pfam PF13641 Glycosyltransferase like family 2 5 201 4.0E-10 T 14-10-2018 Amir_2569 3e30c0cfe662379e1e7ab5a3dbb2e2fb 227 Gene3D G3DSA:3.90.550.10 1 204 1.9E-18 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0248 74c54acd05d434658bc2cd820c9e16ce 266 SUPERFAMILY SSF56281 20 265 3.36E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_0248 74c54acd05d434658bc2cd820c9e16ce 266 SMART SM00849 41 196 2.2E-26 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_0248 74c54acd05d434658bc2cd820c9e16ce 266 Gene3D G3DSA:3.60.15.10 18 200 3.4E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_0248 74c54acd05d434658bc2cd820c9e16ce 266 Gene3D G3DSA:1.10.10.10 202 266 2.6E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0248 74c54acd05d434658bc2cd820c9e16ce 266 Pfam PF00753 Metallo-beta-lactamase superfamily 38 196 1.9E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_0666 0957e5359ad160438c3ffc1c457c5645 313 SUPERFAMILY SSF109998 31 170 2.82E-7 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily Amir_0666 0957e5359ad160438c3ffc1c457c5645 313 Gene3D G3DSA:1.10.4030.10 30 145 4.8E-5 T 14-10-2018 Amir_5821 667d5c6d61f8076e904c8933b23b7336 235 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 29 233 1.2E-53 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_5821 667d5c6d61f8076e904c8933b23b7336 235 Gene3D G3DSA:3.30.360.10 95 203 2.4E-74 T 14-10-2018 Amir_5821 667d5c6d61f8076e904c8933b23b7336 235 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 97 223 1.9E-28 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_5821 667d5c6d61f8076e904c8933b23b7336 235 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 26 94 1.4E-14 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_5821 667d5c6d61f8076e904c8933b23b7336 235 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 116 133 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_5821 667d5c6d61f8076e904c8933b23b7336 235 Gene3D G3DSA:3.40.50.720 1 223 2.4E-74 T 14-10-2018 Amir_5821 667d5c6d61f8076e904c8933b23b7336 235 SUPERFAMILY SSF55347 95 205 1.9E-37 T 14-10-2018 Amir_5821 667d5c6d61f8076e904c8933b23b7336 235 PIRSF PIRSF000161 1 235 3.9E-52 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_5821 667d5c6d61f8076e904c8933b23b7336 235 SUPERFAMILY SSF51735 1 121 2.67E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5821 667d5c6d61f8076e904c8933b23b7336 235 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 234 24.755 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amir_0703 c228750c599f3a3fa0572049d01de5d2 90 Pfam PF10041 Uncharacterized conserved protein (DUF2277) 2 78 2.1E-35 T 14-10-2018 IPR018735 Protein of unknown function DUF2277 Amir_3003 8330d623be555fa4a333b061b432ecc3 339 Gene3D G3DSA:1.10.1660.10 2 123 9.6E-26 T 14-10-2018 Amir_3003 8330d623be555fa4a333b061b432ecc3 339 Pfam PF13411 MerR HTH family regulatory protein 10 77 4.0E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3003 8330d623be555fa4a333b061b432ecc3 339 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 46 66 3.9E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3003 8330d623be555fa4a333b061b432ecc3 339 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 22 35 3.9E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3003 8330d623be555fa4a333b061b432ecc3 339 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 11 22 3.9E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3003 8330d623be555fa4a333b061b432ecc3 339 SMART SM00422 10 79 1.3E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_3003 8330d623be555fa4a333b061b432ecc3 339 SUPERFAMILY SSF46955 10 116 9.89E-25 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_4751 b3234b8bb7a82d5f8cccc78c46b2da3a 241 Pfam PF14256 YwiC-like protein 13 137 4.1E-40 T 14-10-2018 IPR025576 YwiC-like protein Amir_5107 c68a882252d7766e0f881eeb08d49f9f 171 Gene3D G3DSA:2.70.50.50 32 170 4.2E-47 T 14-10-2018 Amir_5107 c68a882252d7766e0f881eeb08d49f9f 171 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 32 168 9.6E-18 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal Amir_5107 c68a882252d7766e0f881eeb08d49f9f 171 SUPERFAMILY SSF81296 32 169 3.92E-33 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_1357 d06db626666d13f5b0bdb05eed99c78a 237 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 2 234 2.1E-35 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Amir_1357 d06db626666d13f5b0bdb05eed99c78a 237 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 237 40.725 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Amir_1357 d06db626666d13f5b0bdb05eed99c78a 237 Pfam PF02654 Cobalamin-5-phosphate synthase 4 232 9.2E-48 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Amir_2946 451f9401a43df49312a67f4aeaac586a 103 Pfam PF05488 PAAR motif 8 90 8.7E-20 T 14-10-2018 IPR008727 PAAR motif Amir_2946 451f9401a43df49312a67f4aeaac586a 103 Gene3D G3DSA:2.60.200.60 2 100 3.3E-11 T 14-10-2018 Amir_4246 98dccab836a9538b29f622de8f42d9b0 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4246 98dccab836a9538b29f622de8f42d9b0 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4246 98dccab836a9538b29f622de8f42d9b0 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4246 98dccab836a9538b29f622de8f42d9b0 295 Gene3D G3DSA:1.10.10.10 4 92 1.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4246 98dccab836a9538b29f622de8f42d9b0 295 SUPERFAMILY SSF53850 92 294 3.26E-23 T 14-10-2018 Amir_4246 98dccab836a9538b29f622de8f42d9b0 295 Gene3D G3DSA:3.40.190.10 173 274 2.1E-31 T 14-10-2018 Amir_4246 98dccab836a9538b29f622de8f42d9b0 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 3.6E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_4246 98dccab836a9538b29f622de8f42d9b0 295 Pfam PF03466 LysR substrate binding domain 90 294 8.6E-27 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_4246 98dccab836a9538b29f622de8f42d9b0 295 SUPERFAMILY SSF46785 8 114 1.97E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4246 98dccab836a9538b29f622de8f42d9b0 295 Gene3D G3DSA:3.40.190.10 94 282 2.1E-31 T 14-10-2018 Amir_4148 2e6622ee7f9e2a5279cf230d1810f719 278 Pfam PF00561 alpha/beta hydrolase fold 27 261 9.2E-31 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4148 2e6622ee7f9e2a5279cf230d1810f719 278 SUPERFAMILY SSF53474 12 278 1.0E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4148 2e6622ee7f9e2a5279cf230d1810f719 278 PRINTS PR00412 Epoxide hydrolase signature 32 50 4.6E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4148 2e6622ee7f9e2a5279cf230d1810f719 278 PRINTS PR00412 Epoxide hydrolase signature 219 235 4.6E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4148 2e6622ee7f9e2a5279cf230d1810f719 278 PRINTS PR00412 Epoxide hydrolase signature 253 275 4.6E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4148 2e6622ee7f9e2a5279cf230d1810f719 278 PRINTS PR00412 Epoxide hydrolase signature 52 67 4.6E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4148 2e6622ee7f9e2a5279cf230d1810f719 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 2.9E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4148 2e6622ee7f9e2a5279cf230d1810f719 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 221 235 2.9E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4148 2e6622ee7f9e2a5279cf230d1810f719 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 2.9E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4148 2e6622ee7f9e2a5279cf230d1810f719 278 Gene3D G3DSA:3.40.50.1820 2 276 1.2E-76 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5235 00b8979eb167aa54a33c1fc081ea3f98 400 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 129 139 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_5235 00b8979eb167aa54a33c1fc081ea3f98 400 Pfam PF02772 S-adenosylmethionine synthetase, central domain 127 246 7.3E-43 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_5235 00b8979eb167aa54a33c1fc081ea3f98 400 Gene3D G3DSA:3.30.300.10 105 388 2.0E-167 T 14-10-2018 Amir_5235 00b8979eb167aa54a33c1fc081ea3f98 400 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 7 104 1.7E-41 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_5235 00b8979eb167aa54a33c1fc081ea3f98 400 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 274 282 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_5235 00b8979eb167aa54a33c1fc081ea3f98 400 Gene3D G3DSA:3.30.300.10 14 285 2.0E-167 T 14-10-2018 Amir_5235 00b8979eb167aa54a33c1fc081ea3f98 400 SUPERFAMILY SSF55973 7 112 3.92E-45 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_5235 00b8979eb167aa54a33c1fc081ea3f98 400 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 248 386 1.2E-65 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_5235 00b8979eb167aa54a33c1fc081ea3f98 400 PIRSF PIRSF000497 1 399 4.2E-163 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_5235 00b8979eb167aa54a33c1fc081ea3f98 400 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 8 397 5.6E-165 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_5235 00b8979eb167aa54a33c1fc081ea3f98 400 Gene3D G3DSA:3.30.300.10 8 248 2.0E-167 T 14-10-2018 Amir_5235 00b8979eb167aa54a33c1fc081ea3f98 400 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 5 398 55.365 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_5235 00b8979eb167aa54a33c1fc081ea3f98 400 SUPERFAMILY SSF55973 248 397 3.22E-65 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_5235 00b8979eb167aa54a33c1fc081ea3f98 400 SUPERFAMILY SSF55973 123 247 4.32E-45 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amir_3432 9e1d7eead4a810a393558eca1774b427 174 Gene3D G3DSA:1.10.3300.10 1 170 2.1E-42 T 14-10-2018 IPR023286 ABATE domain superfamily Amir_3432 9e1d7eead4a810a393558eca1774b427 174 Pfam PF11706 CGNR zinc finger 127 169 2.1E-16 T 14-10-2018 IPR021005 Zinc finger, CGNR Amir_3432 9e1d7eead4a810a393558eca1774b427 174 SUPERFAMILY SSF160904 2 168 3.66E-35 T 14-10-2018 Amir_5353 d75b0310ff3de8c7fb4522937002997b 188 SMART SM00422 30 102 1.9E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_5353 d75b0310ff3de8c7fb4522937002997b 188 SUPERFAMILY SSF46955 33 118 1.79E-15 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_5353 d75b0310ff3de8c7fb4522937002997b 188 Pfam PF13411 MerR HTH family regulatory protein 33 99 2.5E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_5353 d75b0310ff3de8c7fb4522937002997b 188 Gene3D G3DSA:1.10.1660.10 30 102 6.7E-14 T 14-10-2018 Amir_6407 f8974a91090091640a079e0680d803a9 309 Pfam PF00005 ABC transporter 18 156 1.4E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6407 f8974a91090091640a079e0680d803a9 309 SUPERFAMILY SSF52540 2 217 7.89E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6407 f8974a91090091640a079e0680d803a9 309 Gene3D G3DSA:3.40.50.300 1 222 2.5E-52 T 14-10-2018 Amir_6407 f8974a91090091640a079e0680d803a9 309 SMART SM00382 26 204 2.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3934 990c8a49f5780cdfcca21c615a67b266 259 Pfam PF13649 Methyltransferase domain 80 170 2.1E-7 T 14-10-2018 Amir_3934 990c8a49f5780cdfcca21c615a67b266 259 SUPERFAMILY SSF53335 61 245 4.43E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3934 990c8a49f5780cdfcca21c615a67b266 259 Gene3D G3DSA:3.40.50.150 54 256 3.0E-18 T 14-10-2018 Amir_5191 ba6622af0c45d76c02fbb24b18610d3f 259 SUPERFAMILY SSF100950 5 252 4.49E-64 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Amir_5191 ba6622af0c45d76c02fbb24b18610d3f 259 Gene3D G3DSA:3.40.50.1360 1 250 2.0E-86 T 14-10-2018 Amir_5191 ba6622af0c45d76c02fbb24b18610d3f 259 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 8 250 2.8E-73 T 14-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 Amir_5191 ba6622af0c45d76c02fbb24b18610d3f 259 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 240 1.1E-72 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 Amir_2210 b61405789355cacc83be3a4c84164762 298 Pfam PF09754 PAC2 family 27 245 1.0E-53 T 14-10-2018 IPR019151 Proteasome assembly chaperone 2 Amir_2210 b61405789355cacc83be3a4c84164762 298 SUPERFAMILY SSF159659 12 266 3.92E-92 T 14-10-2018 Amir_2210 b61405789355cacc83be3a4c84164762 298 Gene3D G3DSA:1.10.287.100 226 264 1.5E-95 T 14-10-2018 Amir_2210 b61405789355cacc83be3a4c84164762 298 Gene3D G3DSA:3.40.50.10900 21 225 1.5E-95 T 14-10-2018 IPR038389 Proteasome assembly chaperone 2 superfamily Amir_2210 b61405789355cacc83be3a4c84164762 298 PIRSF PIRSF028754 8 296 1.8E-112 T 14-10-2018 IPR008492 Protein of unknown function DUF774 Amir_0463 7673f7029eb8e78d6452b572375becbf 747 Pfam PF13625 Helicase conserved C-terminal domain 462 584 1.1E-38 T 14-10-2018 IPR032830 Helicase XPB/Ssl2, N-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 Amir_0579 c8f30d772014338bcadb5e3ae58e518c 121 SUPERFAMILY SSF140453 5 87 2.09E-5 T 14-10-2018 IPR036689 ESAT-6-like superfamily Amir_0499 99013e8f8c3764408d75fa5934e13e58 436 Gene3D G3DSA:1.20.1250.20 19 416 1.6E-33 T 14-10-2018 Amir_0499 99013e8f8c3764408d75fa5934e13e58 436 Pfam PF05977 Transmembrane secretion effector 14 399 5.9E-34 T 14-10-2018 IPR010290 Transmembrane secretion effector Amir_0499 99013e8f8c3764408d75fa5934e13e58 436 SUPERFAMILY SSF103473 20 407 1.83E-36 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_1997 c3596a920076bc416f04d9eb022892fe 518 Gene3D G3DSA:3.40.50.2000 312 500 4.2E-137 T 14-10-2018 Amir_1997 c3596a920076bc416f04d9eb022892fe 518 Pfam PF00982 Glycosyltransferase family 20 93 515 4.5E-56 T 14-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 Amir_1997 c3596a920076bc416f04d9eb022892fe 518 Gene3D G3DSA:3.40.50.2000 74 512 4.2E-137 T 14-10-2018 Amir_1997 c3596a920076bc416f04d9eb022892fe 518 SUPERFAMILY SSF53756 77 515 1.57E-63 T 14-10-2018 Amir_4993 80eee1e32c7dd61b7f6a38f33d048de6 350 SUPERFAMILY SSF52266 41 327 1.7E-41 T 14-10-2018 Amir_4993 80eee1e32c7dd61b7f6a38f33d048de6 350 Gene3D G3DSA:3.40.50.1110 37 327 1.7E-51 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_4993 80eee1e32c7dd61b7f6a38f33d048de6 350 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 46 317 3.6E-16 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_5992 1e17c7435234c2d6cb27e61a9b02c691 132 Pfam PF14430 Immunity protein Imm1 12 130 4.2E-29 T 14-10-2018 IPR025680 Immunity protein Imm1 Amir_5084 21009e898452b437b94fca3fe44fffd0 188 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 8 188 2.2E-60 T 14-10-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 Amir_5084 21009e898452b437b94fca3fe44fffd0 188 Gene3D G3DSA:2.60.130.10 1 188 8.2E-63 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Amir_5084 21009e898452b437b94fca3fe44fffd0 188 Pfam PF00775 Dioxygenase 38 166 3.6E-15 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 Amir_5084 21009e898452b437b94fca3fe44fffd0 188 SUPERFAMILY SSF49482 4 187 3.53E-52 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 PRINTS PR00359 B-class P450 signature 155 170 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 PRINTS PR00359 B-class P450 signature 291 318 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 PRINTS PR00359 B-class P450 signature 91 102 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 PRINTS PR00359 B-class P450 signature 273 284 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 PRINTS PR00359 B-class P450 signature 319 334 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 PRINTS PR00359 B-class P450 signature 138 154 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 PRINTS PR00359 B-class P450 signature 340 349 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 PRINTS PR00359 B-class P450 signature 349 360 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 PRINTS PR00359 B-class P450 signature 192 214 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 342 351 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 PRINTS PR00385 P450 superfamily signature 238 255 1.8E-9 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 PRINTS PR00385 P450 superfamily signature 273 284 1.8E-9 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 PRINTS PR00385 P450 superfamily signature 340 349 1.8E-9 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 PRINTS PR00385 P450 superfamily signature 349 360 1.8E-9 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 Gene3D G3DSA:1.10.630.10 5 400 1.3E-115 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 Pfam PF00067 Cytochrome P450 208 369 3.0E-27 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2614 7267704c62c64845131ee78c1b9ac40b 400 SUPERFAMILY SSF48264 18 400 1.28E-88 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_1205 bd11f48c97acace247c2adc30e5540d5 421 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 88 389 1.3E-66 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amir_1205 bd11f48c97acace247c2adc30e5540d5 421 Gene3D G3DSA:3.40.50.1100 69 394 5.0E-99 T 14-10-2018 Amir_1205 bd11f48c97acace247c2adc30e5540d5 421 Gene3D G3DSA:3.40.50.1100 121 218 5.0E-99 T 14-10-2018 Amir_1205 bd11f48c97acace247c2adc30e5540d5 421 SUPERFAMILY SSF53686 16 403 3.14E-83 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amir_1205 bd11f48c97acace247c2adc30e5540d5 421 TIGRFAM TIGR00260 thrC: threonine synthase 67 395 8.6E-79 T 14-10-2018 IPR004450 Threonine synthase-like Amir_2086 efd2db9bdd520782a302b21749de71ac 267 Pfam PF01061 ABC-2 type transporter 16 232 6.8E-25 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Amir_2086 efd2db9bdd520782a302b21749de71ac 267 PIRSF PIRSF006648 1 267 4.9E-69 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_6504 e51d4b37c20bdde2eaa6ccba4a4348c5 211 SUPERFAMILY SSF53328 14 208 6.02E-59 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amir_6504 e51d4b37c20bdde2eaa6ccba4a4348c5 211 Gene3D G3DSA:3.40.50.170 5 211 4.0E-78 T 14-10-2018 Amir_6504 e51d4b37c20bdde2eaa6ccba4a4348c5 211 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 14 199 29.336 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Amir_6504 e51d4b37c20bdde2eaa6ccba4a4348c5 211 Pfam PF00551 Formyl transferase 14 193 4.6E-51 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amir_6504 e51d4b37c20bdde2eaa6ccba4a4348c5 211 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 13 201 1.3E-68 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Amir_4360 5cc84c0ef3e9d5645a241c36ef321f86 443 Gene3D G3DSA:3.40.50.11450 1 216 1.9E-54 T 14-10-2018 Amir_4360 5cc84c0ef3e9d5645a241c36ef321f86 443 Gene3D G3DSA:3.40.50.11450 230 419 1.8E-33 T 14-10-2018 Amir_4360 5cc84c0ef3e9d5645a241c36ef321f86 443 SUPERFAMILY SSF53756 2 419 3.7E-40 T 14-10-2018 Amir_4360 5cc84c0ef3e9d5645a241c36ef321f86 443 Gene3D G3DSA:3.40.50.2000 239 406 1.8E-33 T 14-10-2018 Amir_4004 2845d0dc9e5083c5112c23d377b09f8c 305 Gene3D G3DSA:2.120.10.30 25 303 2.7E-66 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_4004 2845d0dc9e5083c5112c23d377b09f8c 305 SUPERFAMILY SSF63829 31 300 5.43E-31 T 14-10-2018 Amir_5889 7a7b1c48cba8775a4740cb22e761fcb3 403 SUPERFAMILY SSF50156 156 214 1.16E-9 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Amir_5889 7a7b1c48cba8775a4740cb22e761fcb3 403 Gene3D G3DSA:2.30.42.10 131 243 4.8E-11 T 14-10-2018 Amir_5889 7a7b1c48cba8775a4740cb22e761fcb3 403 Pfam PF02163 Peptidase family M50 10 354 5.1E-48 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Amir_3320 28d6711b36fd4976ca4ceddd2d1f2afc 404 Pfam PF09967 VWA-like domain (DUF2201) 269 374 1.8E-12 T 14-10-2018 IPR018698 VWA-like domain Amir_3320 28d6711b36fd4976ca4ceddd2d1f2afc 404 SUPERFAMILY SSF53300 263 367 2.67E-7 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_3320 28d6711b36fd4976ca4ceddd2d1f2afc 404 Pfam PF13203 Putative metallopeptidase domain 181 263 4.8E-6 T 14-10-2018 IPR025154 Putative metallopeptidase domain Amir_3320 28d6711b36fd4976ca4ceddd2d1f2afc 404 Pfam PF13203 Putative metallopeptidase domain 6 119 1.6E-13 T 14-10-2018 IPR025154 Putative metallopeptidase domain Amir_5956 ef2f303999b897b1df0c025e07a51789 226 Gene3D G3DSA:3.40.33.10 73 225 8.3E-47 T 14-10-2018 IPR035940 CAP superfamily Amir_5956 ef2f303999b897b1df0c025e07a51789 226 Pfam PF00188 Cysteine-rich secretory protein family 113 224 2.1E-19 T 14-10-2018 IPR014044 CAP domain Amir_5956 ef2f303999b897b1df0c025e07a51789 226 SUPERFAMILY SSF55797 110 225 9.68E-22 T 14-10-2018 IPR035940 CAP superfamily Amir_3310 88658ff492a776afbeac6e476f61b16a 256 SUPERFAMILY SSF46689 28 92 8.72E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3310 88658ff492a776afbeac6e476f61b16a 256 Pfam PF13305 WHG domain 113 161 1.1E-7 T 14-10-2018 IPR025996 WHG domain Amir_3310 88658ff492a776afbeac6e476f61b16a 256 SUPERFAMILY SSF48498 101 205 2.13E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3310 88658ff492a776afbeac6e476f61b16a 256 Gene3D G3DSA:1.10.357.10 24 187 7.2E-26 T 14-10-2018 Amir_3310 88658ff492a776afbeac6e476f61b16a 256 Pfam PF00440 Bacterial regulatory proteins, tetR family 52 81 9.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2625 3b56a71da85f962821838a86ddbd7fa0 353 Gene3D G3DSA:3.20.20.30 2 349 1.1E-78 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_2625 3b56a71da85f962821838a86ddbd7fa0 353 SUPERFAMILY SSF51679 6 347 1.44E-76 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_2625 3b56a71da85f962821838a86ddbd7fa0 353 Pfam PF00296 Luciferase-like monooxygenase 6 315 7.3E-66 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_2564 8323df0a6dc4df0cc00a362c5f1e703b 312 PIRSF PIRSF001439 7 308 3.1E-68 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Amir_2564 8323df0a6dc4df0cc00a362c5f1e703b 312 SUPERFAMILY SSF51735 11 306 2.89E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2564 8323df0a6dc4df0cc00a362c5f1e703b 312 Gene3D G3DSA:3.40.50.720 130 292 6.8E-75 T 14-10-2018 Amir_2564 8323df0a6dc4df0cc00a362c5f1e703b 312 Gene3D G3DSA:3.30.1780.10 16 308 6.8E-75 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 Amir_2564 8323df0a6dc4df0cc00a362c5f1e703b 312 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 28 301 2.0E-60 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Amir_3986 91f7dd58fca326a5b23d94af0ed25315 297 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 62 293 6.2E-63 T 14-10-2018 Amir_3986 91f7dd58fca326a5b23d94af0ed25315 297 Gene3D G3DSA:3.40.50.720 6 295 1.3E-89 T 14-10-2018 Amir_3986 91f7dd58fca326a5b23d94af0ed25315 297 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 203 222 3.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3986 91f7dd58fca326a5b23d94af0ed25315 297 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 183 191 3.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3986 91f7dd58fca326a5b23d94af0ed25315 297 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 141 3.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3986 91f7dd58fca326a5b23d94af0ed25315 297 SUPERFAMILY SSF51735 51 293 3.33E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3986 91f7dd58fca326a5b23d94af0ed25315 297 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 190 218 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_3986 91f7dd58fca326a5b23d94af0ed25315 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 71 1.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3986 91f7dd58fca326a5b23d94af0ed25315 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 241 1.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3986 91f7dd58fca326a5b23d94af0ed25315 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 258 278 1.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3986 91f7dd58fca326a5b23d94af0ed25315 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 141 1.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3986 91f7dd58fca326a5b23d94af0ed25315 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 193 1.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3986 91f7dd58fca326a5b23d94af0ed25315 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 222 1.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0510 fd109e4bb550bf8fd6a2ca76137b176f 276 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0510 fd109e4bb550bf8fd6a2ca76137b176f 276 Pfam PF00005 ABC transporter 21 158 7.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0510 fd109e4bb550bf8fd6a2ca76137b176f 276 SUPERFAMILY SSF52540 4 218 2.76E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0510 fd109e4bb550bf8fd6a2ca76137b176f 276 Gene3D G3DSA:3.40.50.300 1 229 5.8E-62 T 14-10-2018 Amir_0510 fd109e4bb550bf8fd6a2ca76137b176f 276 SMART SM00382 29 215 5.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3926 b346d7cc375221f0e96f6a19281f1b23 353 Pfam PF04616 Glycosyl hydrolases family 43 43 334 4.5E-49 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Amir_3926 b346d7cc375221f0e96f6a19281f1b23 353 Gene3D G3DSA:2.115.10.20 35 343 2.1E-78 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3926 b346d7cc375221f0e96f6a19281f1b23 353 SUPERFAMILY SSF75005 41 335 3.8E-54 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3699 f3ec1b001324d8fa99e92acd125489af 371 Gene3D G3DSA:3.50.50.60 2 367 6.3E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3699 f3ec1b001324d8fa99e92acd125489af 371 Pfam PF01494 FAD binding domain 3 68 4.4E-7 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_3699 f3ec1b001324d8fa99e92acd125489af 371 SUPERFAMILY SSF51905 4 365 1.55E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3699 f3ec1b001324d8fa99e92acd125489af 371 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.5E-15 T 14-10-2018 Amir_3699 f3ec1b001324d8fa99e92acd125489af 371 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 1.5E-15 T 14-10-2018 Amir_3699 f3ec1b001324d8fa99e92acd125489af 371 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 142 157 1.5E-15 T 14-10-2018 Amir_2215 9f22e021d808dbe32de3086942bde097 407 SUPERFAMILY SSF51395 4 342 1.26E-89 T 14-10-2018 Amir_2215 9f22e021d808dbe32de3086942bde097 407 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 335 1.2E-41 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Amir_2215 9f22e021d808dbe32de3086942bde097 407 Gene3D G3DSA:3.20.20.70 3 356 2.0E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_0984 b0dce105bd015d5da87a76899e805025 343 Pfam PF01008 Initiation factor 2 subunit family 70 329 1.9E-43 T 14-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 Amir_0984 b0dce105bd015d5da87a76899e805025 343 SUPERFAMILY SSF100950 15 337 6.28E-70 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Amir_0984 b0dce105bd015d5da87a76899e805025 343 Gene3D G3DSA:1.20.120.420 45 137 9.9E-67 T 14-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Amir_0984 b0dce105bd015d5da87a76899e805025 343 Gene3D G3DSA:3.40.50.10470 138 329 9.9E-67 T 14-10-2018 Amir_6572 996d348b10df3d31e00bf8343c45e9ba 464 Gene3D G3DSA:3.10.20.90 4 85 2.5E-13 T 14-10-2018 Amir_6572 996d348b10df3d31e00bf8343c45e9ba 464 PIRSF PIRSF017804 1 462 8.1E-117 T 14-10-2018 IPR006707 Type VII secretion system membrane protein EccD Amir_6572 996d348b10df3d31e00bf8343c45e9ba 464 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 9 84 4.8E-22 T 14-10-2018 IPR024962 YukD-like Amir_6572 996d348b10df3d31e00bf8343c45e9ba 464 TIGRFAM TIGR03920 T7SS_EccD: type VII secretion integral membrane protein EccD 11 459 1.7E-91 T 14-10-2018 IPR006707 Type VII secretion system membrane protein EccD Amir_3882 ef9145f0af45043b4340742ab2071bd1 511 Gene3D G3DSA:2.40.10.10 41 132 3.5E-15 T 14-10-2018 Amir_3882 ef9145f0af45043b4340742ab2071bd1 511 Pfam PF00089 Trypsin 30 238 4.5E-20 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_3882 ef9145f0af45043b4340742ab2071bd1 511 SMART SM00020 28 239 2.0E-5 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_3882 ef9145f0af45043b4340742ab2071bd1 511 SUPERFAMILY SSF50494 19 240 2.04E-23 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_3882 ef9145f0af45043b4340742ab2071bd1 511 Gene3D G3DSA:2.40.10.10 31 218 3.5E-15 T 14-10-2018 Amir_3882 ef9145f0af45043b4340742ab2071bd1 511 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 60 75 2.9E-7 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_3882 ef9145f0af45043b4340742ab2071bd1 511 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 113 127 2.9E-7 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_3882 ef9145f0af45043b4340742ab2071bd1 511 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 184 196 2.9E-7 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 Amir_6701 1fd2ec9df4b1e6ed7ef858d9a62f237b 303 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 298 2.9E-55 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Amir_6701 1fd2ec9df4b1e6ed7ef858d9a62f237b 303 Gene3D G3DSA:3.90.226.10 7 242 1.2E-91 T 14-10-2018 Amir_6701 1fd2ec9df4b1e6ed7ef858d9a62f237b 303 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 302 53.499 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 Amir_6701 1fd2ec9df4b1e6ed7ef858d9a62f237b 303 SUPERFAMILY SSF52096 15 300 4.64E-78 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_6701 1fd2ec9df4b1e6ed7ef858d9a62f237b 303 TIGRFAM TIGR01929 menB: naphthoate synthase 23 298 1.6E-130 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 Amir_6701 1fd2ec9df4b1e6ed7ef858d9a62f237b 303 Gene3D G3DSA:1.10.12.10 243 291 5.9E-27 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Amir_3137 34ccd8c4284d993f57e1450040c6047b 251 Pfam PF13649 Methyltransferase domain 51 144 8.2E-12 T 14-10-2018 Amir_3137 34ccd8c4284d993f57e1450040c6047b 251 Gene3D G3DSA:3.40.50.150 17 247 3.5E-75 T 14-10-2018 Amir_3137 34ccd8c4284d993f57e1450040c6047b 251 SUPERFAMILY SSF53335 21 249 2.03E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3137 34ccd8c4284d993f57e1450040c6047b 251 Gene3D G3DSA:2.20.25.570 152 208 3.5E-75 T 14-10-2018 Amir_4165 f49debe55a5eebcee023d1c6f67131a2 196 Pfam PF03737 Aldolase/RraA 16 162 1.4E-42 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Amir_4165 f49debe55a5eebcee023d1c6f67131a2 196 Gene3D G3DSA:3.50.30.100 2 184 5.3E-49 T 14-10-2018 Amir_4165 f49debe55a5eebcee023d1c6f67131a2 196 SUPERFAMILY SSF89562 14 172 5.1E-43 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Amir_6450 4c8d78f78fa28cf69a90a7eb8e2d45e1 147 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 29 121 8.4E-10 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Amir_6450 4c8d78f78fa28cf69a90a7eb8e2d45e1 147 Gene3D G3DSA:3.40.140.10 16 146 4.0E-44 T 14-10-2018 Amir_6450 4c8d78f78fa28cf69a90a7eb8e2d45e1 147 SUPERFAMILY SSF53927 21 146 7.38E-37 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Amir_1946 8a8b1a8317aa4361a89387859f4089a3 282 Pfam PF08241 Methyltransferase domain 73 175 5.3E-5 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_1946 8a8b1a8317aa4361a89387859f4089a3 282 Gene3D G3DSA:3.40.50.150 6 267 1.8E-57 T 14-10-2018 Amir_1946 8a8b1a8317aa4361a89387859f4089a3 282 SUPERFAMILY SSF53335 25 227 2.51E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_2547 0e17bf81e2f160bf094bc4e0bd69ed7f 372 Gene3D G3DSA:2.40.10.10 183 368 2.3E-25 T 14-10-2018 Amir_2547 0e17bf81e2f160bf094bc4e0bd69ed7f 372 SUPERFAMILY SSF50494 186 344 3.21E-15 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_2547 0e17bf81e2f160bf094bc4e0bd69ed7f 372 Gene3D G3DSA:2.40.10.10 254 358 2.3E-25 T 14-10-2018 Amir_2547 0e17bf81e2f160bf094bc4e0bd69ed7f 372 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 211 216 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 Amir_2547 0e17bf81e2f160bf094bc4e0bd69ed7f 372 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 321 332 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site Amir_1688 a1e5c8a9bbab9506f88ebb910ddc2a87 159 Gene3D G3DSA:1.20.1260.100 9 159 7.2E-43 T 14-10-2018 IPR038330 TspO/MBR-related superfamily Amir_1688 a1e5c8a9bbab9506f88ebb910ddc2a87 159 Pfam PF03073 TspO/MBR family 19 156 1.2E-40 T 14-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 Amir_1688 a1e5c8a9bbab9506f88ebb910ddc2a87 159 PIRSF PIRSF005859 5 159 5.4E-43 T 14-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 Amir_0049 0fdeaddb5394df455ce14dda224473e3 593 Pfam PF01019 Gamma-glutamyltranspeptidase 28 586 2.9E-113 T 14-10-2018 Amir_0049 0fdeaddb5394df455ce14dda224473e3 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 123 142 2.6E-26 T 14-10-2018 Amir_0049 0fdeaddb5394df455ce14dda224473e3 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 105 123 2.6E-26 T 14-10-2018 Amir_0049 0fdeaddb5394df455ce14dda224473e3 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 404 422 2.6E-26 T 14-10-2018 Amir_0049 0fdeaddb5394df455ce14dda224473e3 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 458 473 2.6E-26 T 14-10-2018 Amir_0049 0fdeaddb5394df455ce14dda224473e3 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 35 60 2.6E-26 T 14-10-2018 Amir_0049 0fdeaddb5394df455ce14dda224473e3 593 Gene3D G3DSA:3.60.20.40 404 592 1.6E-44 T 14-10-2018 Amir_0049 0fdeaddb5394df455ce14dda224473e3 593 Gene3D G3DSA:1.10.246.130 261 377 2.3E-21 T 14-10-2018 Amir_0049 0fdeaddb5394df455ce14dda224473e3 593 SUPERFAMILY SSF56235 2 592 1.0E-132 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_0207 a387a9143752bd85ee5e643c6f6e36f0 336 SUPERFAMILY SSF161098 92 319 2.62E-17 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0207 a387a9143752bd85ee5e643c6f6e36f0 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 334 2.5E-37 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_5706 94b689f3aedef8b21c52b1d0636a3ce0 124 Gene3D G3DSA:3.10.20.400 2 96 8.7E-40 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Amir_5706 94b689f3aedef8b21c52b1d0636a3ce0 124 SUPERFAMILY SSF141734 5 108 4.18E-46 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Amir_5706 94b689f3aedef8b21c52b1d0636a3ce0 124 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 32 104 5.3E-34 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Amir_5706 94b689f3aedef8b21c52b1d0636a3ce0 124 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 6 109 31.317 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Amir_5706 94b689f3aedef8b21c52b1d0636a3ce0 124 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 55 109 2.0E-20 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Amir_4194 5776d9ca04c278986b99cf3c352bb020 1065 Pfam PF00082 Subtilase family 202 459 1.0E-55 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_4194 5776d9ca04c278986b99cf3c352bb020 1065 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 410 420 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_4194 5776d9ca04c278986b99cf3c352bb020 1065 PRINTS PR00723 Subtilisin serine protease family (S8) signature 239 252 1.0E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_4194 5776d9ca04c278986b99cf3c352bb020 1065 PRINTS PR00723 Subtilisin serine protease family (S8) signature 202 221 1.0E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_4194 5776d9ca04c278986b99cf3c352bb020 1065 PRINTS PR00723 Subtilisin serine protease family (S8) signature 409 425 1.0E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_4194 5776d9ca04c278986b99cf3c352bb020 1065 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 207 218 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_4194 5776d9ca04c278986b99cf3c352bb020 1065 Gene3D G3DSA:3.40.50.200 177 469 2.8E-90 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_4194 5776d9ca04c278986b99cf3c352bb020 1065 SUPERFAMILY SSF52743 184 469 5.76E-78 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_6562 d7c802b3d8e686c60eb5ce282ccf501b 97 Gene3D G3DSA:1.10.287.1060 3 97 2.9E-8 T 14-10-2018 Amir_6562 d7c802b3d8e686c60eb5ce282ccf501b 97 SUPERFAMILY SSF140453 6 97 1.06E-5 T 14-10-2018 IPR036689 ESAT-6-like superfamily Amir_3101 87626b96813132d522e1fb344d5aeea5 582 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 187 227 8.9E-11 T 14-10-2018 IPR022435 Surface-anchored repeat, actinobacteria Amir_1793 bbbe57ef22444737af96fff6dccde23a 901 SMART SM00530 21 77 0.0018 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_1793 bbbe57ef22444737af96fff6dccde23a 901 Gene3D G3DSA:2.130.10.10 565 743 1.5E-23 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_1793 bbbe57ef22444737af96fff6dccde23a 901 Pfam PF00400 WD domain, G-beta repeat 785 819 5.0E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_1793 bbbe57ef22444737af96fff6dccde23a 901 Pfam PF00400 WD domain, G-beta repeat 694 730 0.0057 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_1793 bbbe57ef22444737af96fff6dccde23a 901 SUPERFAMILY SSF52540 112 299 4.36E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1793 bbbe57ef22444737af96fff6dccde23a 901 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 806 820 - T 14-10-2018 IPR019775 WD40 repeat, conserved site Amir_1793 bbbe57ef22444737af96fff6dccde23a 901 SUPERFAMILY SSF50978 607 876 1.1E-41 T 14-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 Amir_1793 bbbe57ef22444737af96fff6dccde23a 901 SMART SM00320 649 685 7.7 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_1793 bbbe57ef22444737af96fff6dccde23a 901 SMART SM00320 780 819 2.5E-7 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_1793 bbbe57ef22444737af96fff6dccde23a 901 SMART SM00320 691 730 1.5E-6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_1793 bbbe57ef22444737af96fff6dccde23a 901 SMART SM00320 604 643 74.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_1793 bbbe57ef22444737af96fff6dccde23a 901 SMART SM00320 825 864 13.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_1793 bbbe57ef22444737af96fff6dccde23a 901 SMART SM00320 736 774 0.34 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Amir_1793 bbbe57ef22444737af96fff6dccde23a 901 Gene3D G3DSA:2.130.10.10 744 896 2.4E-22 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_6272 a2391e0aa1ac82f8aca3d8f19fae55eb 519 SUPERFAMILY SSF53335 160 276 3.9E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_6272 a2391e0aa1ac82f8aca3d8f19fae55eb 519 Pfam PF01861 Protein of unknown function DUF43 110 285 2.2E-29 T 14-10-2018 IPR002723 N(4)-bis(aminopropyl)spermidine synthase, C-terminal Amir_6272 a2391e0aa1ac82f8aca3d8f19fae55eb 519 Gene3D G3DSA:3.40.50.150 99 313 2.6E-52 T 14-10-2018 Amir_6272 a2391e0aa1ac82f8aca3d8f19fae55eb 519 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 216 222 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Amir_6997 61c3792475bc43c215562bc1b7e93bbb 232 SUPERFAMILY SSF48008 93 227 2.88E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_6997 61c3792475bc43c215562bc1b7e93bbb 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 87 6.1E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_6997 61c3792475bc43c215562bc1b7e93bbb 232 SUPERFAMILY SSF46785 20 104 6.15E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6997 61c3792475bc43c215562bc1b7e93bbb 232 Gene3D G3DSA:1.20.120.530 90 229 3.7E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amir_6997 61c3792475bc43c215562bc1b7e93bbb 232 Pfam PF07729 FCD domain 97 218 1.0E-13 T 14-10-2018 IPR011711 GntR, C-terminal Amir_6997 61c3792475bc43c215562bc1b7e93bbb 232 SMART SM00345 29 87 4.4E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_6997 61c3792475bc43c215562bc1b7e93bbb 232 Gene3D G3DSA:1.10.10.10 13 88 1.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6997 61c3792475bc43c215562bc1b7e93bbb 232 SMART SM00895 97 220 3.8E-10 T 14-10-2018 IPR011711 GntR, C-terminal Amir_3669 af758694aae1e3387f227c597fc6bc27 488 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 345 481 4.3E-55 T 14-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Amir_3669 af758694aae1e3387f227c597fc6bc27 488 SUPERFAMILY SSF53613 15 324 2.34E-46 T 14-10-2018 IPR029056 Ribokinase-like Amir_3669 af758694aae1e3387f227c597fc6bc27 488 Pfam PF00294 pfkB family carbohydrate kinase 17 318 1.8E-34 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Amir_3669 af758694aae1e3387f227c597fc6bc27 488 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 351 416 3.5E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Amir_3669 af758694aae1e3387f227c597fc6bc27 488 Gene3D G3DSA:3.40.50.620 342 483 9.7E-37 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_3669 af758694aae1e3387f227c597fc6bc27 488 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 55 78 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Amir_3669 af758694aae1e3387f227c597fc6bc27 488 SUPERFAMILY SSF52374 351 478 8.0E-24 T 14-10-2018 Amir_3669 af758694aae1e3387f227c597fc6bc27 488 Hamap MF_01603 Bifunctional protein HldE [hldE]. 8 483 31.278 T 14-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Amir_3669 af758694aae1e3387f227c597fc6bc27 488 Gene3D G3DSA:3.40.1190.20 9 322 1.2E-84 T 14-10-2018 IPR029056 Ribokinase-like Amir_3669 af758694aae1e3387f227c597fc6bc27 488 Pfam PF01467 Cytidylyltransferase-like 354 447 4.6E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Amir_2292 d9d67ce9f148fbdf50de87c9de7b4d96 357 Pfam PF02361 Cobalt transport protein 5 220 1.3E-6 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Amir_4353 e5f492ee1fab5b413aaaba771108d5cb 507 SUPERFAMILY SSF48557 22 504 1.81E-133 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Amir_4353 e5f492ee1fab5b413aaaba771108d5cb 507 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 152 167 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 Amir_4353 e5f492ee1fab5b413aaaba771108d5cb 507 Gene3D G3DSA:1.10.275.10 13 210 9.1E-48 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Amir_4353 e5f492ee1fab5b413aaaba771108d5cb 507 Gene3D G3DSA:1.20.200.10 211 505 4.7E-77 T 14-10-2018 Amir_4353 e5f492ee1fab5b413aaaba771108d5cb 507 Pfam PF00221 Aromatic amino acid lyase 25 476 1.3E-126 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 Amir_4221 8de6ab713bef5c2a13c5f6a316d676f7 184 SUPERFAMILY SSF82607 6 92 7.06E-7 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_4221 8de6ab713bef5c2a13c5f6a316d676f7 184 Pfam PF02575 YbaB/EbfC DNA-binding family 6 92 1.5E-10 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_4221 8de6ab713bef5c2a13c5f6a316d676f7 184 Gene3D G3DSA:3.30.1310.10 1 99 1.7E-7 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_4003 d05cf666ba76e1de561e24e3e6b959e8 250 SUPERFAMILY SSF53474 10 246 2.89E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4003 d05cf666ba76e1de561e24e3e6b959e8 250 Gene3D G3DSA:3.40.50.1820 4 249 4.8E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4003 d05cf666ba76e1de561e24e3e6b959e8 250 Pfam PF00975 Thioesterase domain 23 244 4.4E-60 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 Amir_4003 d05cf666ba76e1de561e24e3e6b959e8 250 SMART SM00824 Thioesterase 25 242 1.6E-5 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 Amir_0969 ce221f8225a78a58acd75484838280d6 144 SUPERFAMILY SSF55874 48 135 7.69E-5 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0969 ce221f8225a78a58acd75484838280d6 144 Gene3D G3DSA:3.30.565.10 19 144 1.6E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6495 1ce60aa5c5f796c3c29067f5acb8e625 507 Pfam PF14021 Tuberculosis necrotizing toxin 412 497 3.0E-23 T 14-10-2018 IPR025331 Tuberculosis necrotizing toxin KEGG: 00760+3.2.2.5 Amir_6495 1ce60aa5c5f796c3c29067f5acb8e625 507 SUPERFAMILY SSF160424 14 142 1.44E-13 T 14-10-2018 IPR036170 Probable antitoxin YezG superfamily Amir_1158 c9d56d993625ffd97bacb041b098efb7 448 Pfam PF07690 Major Facilitator Superfamily 30 389 4.1E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_1158 c9d56d993625ffd97bacb041b098efb7 448 Gene3D G3DSA:1.20.1250.20 11 431 1.6E-35 T 14-10-2018 Amir_1158 c9d56d993625ffd97bacb041b098efb7 448 SUPERFAMILY SSF103473 14 434 8.24E-45 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_3008 7810d57ec7403353a7826549edd9896f 391 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 50 376 9.4E-29 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 Amir_3008 7810d57ec7403353a7826549edd9896f 391 SUPERFAMILY SSF53649 49 389 1.83E-52 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Amir_3008 7810d57ec7403353a7826549edd9896f 391 Gene3D G3DSA:3.40.720.10 45 390 6.3E-35 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Amir_5013 142bbc891c3d181285f23d233f4f56b8 256 SUPERFAMILY SSF102198 22 251 1.96E-39 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Amir_5013 142bbc891c3d181285f23d233f4f56b8 256 Gene3D G3DSA:3.50.30.50 19 253 5.0E-60 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Amir_5013 142bbc891c3d181285f23d233f4f56b8 256 Pfam PF04199 Putative cyclase 47 193 6.8E-27 T 14-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Amir_0343 d8c07fe5d224b88566dcebd6d9a0870d 329 Gene3D G3DSA:1.10.1670.10 45 247 1.9E-68 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Amir_0343 d8c07fe5d224b88566dcebd6d9a0870d 329 SMART SM00525 227 247 0.0052 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Amir_0343 d8c07fe5d224b88566dcebd6d9a0870d 329 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 70 191 1.5E-15 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Amir_0343 d8c07fe5d224b88566dcebd6d9a0870d 329 SUPERFAMILY SSF48150 44 254 2.83E-62 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Amir_0343 d8c07fe5d224b88566dcebd6d9a0870d 329 SMART SM00478 74 226 1.7E-41 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Amir_0343 d8c07fe5d224b88566dcebd6d9a0870d 329 Pfam PF00633 Helix-hairpin-helix motif 135 163 3.5E-8 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Amir_0343 d8c07fe5d224b88566dcebd6d9a0870d 329 Gene3D G3DSA:1.10.340.30 55 167 1.9E-68 T 14-10-2018 Amir_5504 876d9584695b0ed0375d231f3bd93214 188 Pfam PF02575 YbaB/EbfC DNA-binding family 20 102 4.2E-7 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_5504 876d9584695b0ed0375d231f3bd93214 188 SUPERFAMILY SSF82607 23 102 3.53E-6 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_2376 04e9ffe39b9256ffa9e2ee253618a87c 170 Gene3D G3DSA:1.10.10.10 12 157 4.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2376 04e9ffe39b9256ffa9e2ee253618a87c 170 SUPERFAMILY SSF46785 12 155 4.92E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2376 04e9ffe39b9256ffa9e2ee253618a87c 170 SMART SM00347 38 141 5.7E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2376 04e9ffe39b9256ffa9e2ee253618a87c 170 Pfam PF12802 MarR family 44 103 1.0E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_6137 f5f365dd7b92ddf38dcbeefb870293e5 312 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 304 34.456 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6137 f5f365dd7b92ddf38dcbeefb870293e5 312 SUPERFAMILY SSF52943 3 304 1.7E-78 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6137 f5f365dd7b92ddf38dcbeefb870293e5 312 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 3 304 5.9E-99 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6137 f5f365dd7b92ddf38dcbeefb870293e5 312 Pfam PF00231 ATP synthase 5 304 6.8E-90 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6137 f5f365dd7b92ddf38dcbeefb870293e5 312 PRINTS PR00126 ATP synthase gamma subunit signature 75 94 1.3E-34 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6137 f5f365dd7b92ddf38dcbeefb870293e5 312 PRINTS PR00126 ATP synthase gamma subunit signature 282 303 1.3E-34 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6137 f5f365dd7b92ddf38dcbeefb870293e5 312 PRINTS PR00126 ATP synthase gamma subunit signature 251 270 1.3E-34 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6137 f5f365dd7b92ddf38dcbeefb870293e5 312 PRINTS PR00126 ATP synthase gamma subunit signature 182 199 1.3E-34 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6137 f5f365dd7b92ddf38dcbeefb870293e5 312 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 290 303 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6137 f5f365dd7b92ddf38dcbeefb870293e5 312 Gene3D G3DSA:3.40.1380.10 62 223 2.0E-91 T 14-10-2018 Amir_6137 f5f365dd7b92ddf38dcbeefb870293e5 312 Gene3D G3DSA:1.10.287.80 7 300 2.0E-91 T 14-10-2018 Amir_0445 70185998f992bd7dcdd958a95f4a4aee 224 Pfam PF03932 CutC family 2 194 4.5E-32 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 Amir_0445 70185998f992bd7dcdd958a95f4a4aee 224 SUPERFAMILY SSF110395 1 202 4.05E-44 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 Amir_0445 70185998f992bd7dcdd958a95f4a4aee 224 Gene3D G3DSA:3.20.20.380 1 216 9.4E-47 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 Amir_4756 6eb51f3a014b88ee58ec22d464bed896 659 Pfam PF01435 Peptidase family M48 159 277 9.3E-5 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Amir_2034 774d1e7dd843443535131e3eab3ddd82 334 Pfam PF03741 Integral membrane protein TerC family 68 270 4.7E-58 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 Amir_2034 774d1e7dd843443535131e3eab3ddd82 334 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 4 301 6.8E-130 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 Amir_5724 13656794916c1e2b1037cb544c52aaff 393 Pfam PF00266 Aminotransferase class-V 22 385 1.0E-58 T 14-10-2018 IPR000192 Aminotransferase class V domain Amir_5724 13656794916c1e2b1037cb544c52aaff 393 SUPERFAMILY SSF53383 7 391 3.06E-81 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_5724 13656794916c1e2b1037cb544c52aaff 393 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 207 227 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Amir_5724 13656794916c1e2b1037cb544c52aaff 393 Hamap MF_02038 Probable hercynylcysteine sulfoxide lyase [egtE]. 9 392 35.389 T 14-10-2018 IPR027563 Pyridoxal-phosphate-dependent protein EgtE Amir_5724 13656794916c1e2b1037cb544c52aaff 393 Gene3D G3DSA:3.90.1150.10 20 386 5.1E-93 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_5724 13656794916c1e2b1037cb544c52aaff 393 Gene3D G3DSA:3.40.640.10 33 290 5.1E-93 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_4107 9f0e7e22fe7ac3c61547e4fb56bedacd 317 SUPERFAMILY SSF50129 2 149 1.98E-29 T 14-10-2018 IPR011032 GroES-like superfamily Amir_4107 9f0e7e22fe7ac3c61547e4fb56bedacd 317 Gene3D G3DSA:3.40.50.720 124 260 4.0E-73 T 14-10-2018 Amir_4107 9f0e7e22fe7ac3c61547e4fb56bedacd 317 Pfam PF13602 Zinc-binding dehydrogenase 185 315 1.2E-16 T 14-10-2018 Amir_4107 9f0e7e22fe7ac3c61547e4fb56bedacd 317 SMART SM00829 10 315 1.1E-12 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_4107 9f0e7e22fe7ac3c61547e4fb56bedacd 317 Gene3D G3DSA:3.90.180.10 9 314 4.0E-73 T 14-10-2018 Amir_4107 9f0e7e22fe7ac3c61547e4fb56bedacd 317 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 88 1.7E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_4107 9f0e7e22fe7ac3c61547e4fb56bedacd 317 SUPERFAMILY SSF51735 113 258 2.35E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3868 b55217a08bdb70f17ab67ec5be9ec0ab 282 Gene3D G3DSA:3.40.50.1820 9 281 3.2E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3868 b55217a08bdb70f17ab67ec5be9ec0ab 282 SUPERFAMILY SSF53474 10 276 1.33E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3868 b55217a08bdb70f17ab67ec5be9ec0ab 282 Pfam PF00756 Putative esterase 134 198 6.2E-8 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Amir_2349 20f23485efa95d66a39deb987d8ab6a2 132 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 83 128 2.3E-6 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Amir_4587 1355bad775caa1f284ff49d2af9bad8f 301 SUPERFAMILY SSF53335 129 265 9.73E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_4587 1355bad775caa1f284ff49d2af9bad8f 301 Pfam PF13649 Methyltransferase domain 166 255 8.4E-9 T 14-10-2018 Amir_4587 1355bad775caa1f284ff49d2af9bad8f 301 Gene3D G3DSA:3.40.50.150 96 297 3.6E-17 T 14-10-2018 Amir_0589 20121f1dba260456b5344741e82392cb 671 Pfam PF14072 DNA-sulfur modification-associated 33 309 1.2E-21 T 14-10-2018 IPR017642 DNA sulphur modification protein DndB Amir_3676 5d7d8f6487c05d688f80205d54af2293 638 Pfam PF13537 Glutamine amidotransferase domain 47 166 9.2E-38 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Amir_3676 5d7d8f6487c05d688f80205d54af2293 638 SUPERFAMILY SSF52402 215 594 1.6E-47 T 14-10-2018 Amir_3676 5d7d8f6487c05d688f80205d54af2293 638 PIRSF PIRSF001589 1 629 6.1E-116 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Amir_3676 5d7d8f6487c05d688f80205d54af2293 638 Gene3D G3DSA:3.40.50.620 240 431 5.3E-33 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_3676 5d7d8f6487c05d688f80205d54af2293 638 Gene3D G3DSA:3.40.50.620 470 594 8.4E-12 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_3676 5d7d8f6487c05d688f80205d54af2293 638 Gene3D G3DSA:3.60.20.10 10 182 3.7E-52 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_3676 5d7d8f6487c05d688f80205d54af2293 638 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 553 2.5E-108 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Amir_3676 5d7d8f6487c05d688f80205d54af2293 638 SUPERFAMILY SSF56235 1 220 1.03E-58 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_3676 5d7d8f6487c05d688f80205d54af2293 638 Pfam PF00733 Asparagine synthase 246 607 5.8E-64 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Amir_1027 33ec05fcae5c3b759bb9410a68869fff 325 Pfam PF09335 SNARE associated Golgi protein 36 162 7.0E-22 T 14-10-2018 IPR032816 SNARE associated Golgi protein Amir_6122 3176cdabb77bb780f72c215265d78e43 61 Pfam PF04149 Domain of unknown function (DUF397) 10 61 2.2E-21 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_5851 cfca156562e68c025860e94e3c90cd7c 242 SUPERFAMILY SSF51206 29 153 9.03E-22 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Amir_5851 cfca156562e68c025860e94e3c90cd7c 242 SUPERFAMILY SSF46785 159 238 5.19E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5851 cfca156562e68c025860e94e3c90cd7c 242 Pfam PF13545 Crp-like helix-turn-helix domain 161 236 4.0E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amir_5851 cfca156562e68c025860e94e3c90cd7c 242 Gene3D G3DSA:1.10.10.10 158 240 1.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5851 cfca156562e68c025860e94e3c90cd7c 242 SMART SM00100 23 141 1.7E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_5851 cfca156562e68c025860e94e3c90cd7c 242 Pfam PF00027 Cyclic nucleotide-binding domain 42 128 3.8E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_5851 cfca156562e68c025860e94e3c90cd7c 242 Gene3D G3DSA:2.60.120.10 20 155 1.5E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_5883 eeba63738229fbec08ff5386f4102988 509 SUPERFAMILY SSF52540 5 241 4.5E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5883 eeba63738229fbec08ff5386f4102988 509 Gene3D G3DSA:3.40.50.300 4 244 3.8E-52 T 14-10-2018 Amir_5883 eeba63738229fbec08ff5386f4102988 509 SUPERFAMILY SSF52317 260 443 3.15E-34 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_5883 eeba63738229fbec08ff5386f4102988 509 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 482 1.0E-137 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Amir_5883 eeba63738229fbec08ff5386f4102988 509 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 492 185.688 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Amir_5883 eeba63738229fbec08ff5386f4102988 509 Gene3D G3DSA:3.40.50.880 254 448 1.6E-23 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_5883 eeba63738229fbec08ff5386f4102988 509 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 231 6.4E-24 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Amir_5883 eeba63738229fbec08ff5386f4102988 509 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 259 434 4.0E-44 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Amir_1143 e2e7da3fad71d76e940db6fd38c14769 204 Gene3D G3DSA:3.40.30.10 2 204 1.8E-74 T 14-10-2018 Amir_1143 e2e7da3fad71d76e940db6fd38c14769 204 SUPERFAMILY SSF52833 7 164 1.72E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_1143 e2e7da3fad71d76e940db6fd38c14769 204 Pfam PF01323 DSBA-like thioredoxin domain 8 162 5.8E-7 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Amir_4034 92fe9c4d68d9f9811524e41e18b8079f 373 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 261 267 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Amir_4034 92fe9c4d68d9f9811524e41e18b8079f 373 Pfam PF01070 FMN-dependent dehydrogenase 24 363 1.1E-112 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Amir_4034 92fe9c4d68d9f9811524e41e18b8079f 373 PIRSF PIRSF000138 10 368 6.5E-111 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Amir_4034 92fe9c4d68d9f9811524e41e18b8079f 373 Gene3D G3DSA:3.20.20.70 16 366 2.3E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_4034 92fe9c4d68d9f9811524e41e18b8079f 373 SUPERFAMILY SSF51395 17 363 3.09E-86 T 14-10-2018 Amir_0281 f352b515e9a0370b0bcc2d91b160503b 109 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 7 53 5.0E-8 T 14-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal Amir_0281 f352b515e9a0370b0bcc2d91b160503b 109 TIGRFAM TIGR03816 tadE_like_DECH: helicase/secretion neighborhood TadE-like protein 5 109 3.1E-25 T 14-10-2018 IPR021202 Apoptosis inhibitor Rv3654c-like Amir_5723 3a6ac33de3dc4cc6d2e32548775671c5 439 Gene3D G3DSA:3.40.630.10 119 438 6.8E-102 T 14-10-2018 Amir_5723 3a6ac33de3dc4cc6d2e32548775671c5 439 ProSitePatterns PS00133 Zinc carboxypeptidases, zinc-binding region 2 signature. 318 328 - T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Amir_5723 3a6ac33de3dc4cc6d2e32548775671c5 439 SUPERFAMILY SSF53187 122 428 3.49E-81 T 14-10-2018 Amir_5723 3a6ac33de3dc4cc6d2e32548775671c5 439 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 151 163 3.5E-12 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Amir_5723 3a6ac33de3dc4cc6d2e32548775671c5 439 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 176 190 3.5E-12 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Amir_5723 3a6ac33de3dc4cc6d2e32548775671c5 439 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 256 264 3.5E-12 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Amir_5723 3a6ac33de3dc4cc6d2e32548775671c5 439 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 315 328 3.5E-12 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Amir_5723 3a6ac33de3dc4cc6d2e32548775671c5 439 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 176 198 - T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Amir_5723 3a6ac33de3dc4cc6d2e32548775671c5 439 SMART SM00631 125 415 5.1E-98 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Amir_5723 3a6ac33de3dc4cc6d2e32548775671c5 439 Pfam PF00246 Zinc carboxypeptidase 132 411 2.5E-68 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Amir_5234 2fcf48a90fb9d678579cf07731f93e57 665 Gene3D G3DSA:3.40.50.300 181 327 2.1E-24 T 14-10-2018 Amir_5234 2fcf48a90fb9d678579cf07731f93e57 665 Gene3D G3DSA:1.10.8.630 20 132 5.5E-18 T 14-10-2018 Amir_5234 2fcf48a90fb9d678579cf07731f93e57 665 Hamap MF_00983 Probable primosomal protein N' [priA]. 27 664 20.002 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Amir_0348 4888d38aa721d6f6f43a0d43598a5a60 419 SUPERFAMILY SSF53850 35 407 9.51E-82 T 14-10-2018 Amir_0348 4888d38aa721d6f6f43a0d43598a5a60 419 Pfam PF13416 Bacterial extracellular solute-binding protein 52 355 2.3E-47 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_0348 4888d38aa721d6f6f43a0d43598a5a60 419 Gene3D G3DSA:3.40.190.10 147 400 1.3E-98 T 14-10-2018 Amir_0348 4888d38aa721d6f6f43a0d43598a5a60 419 Gene3D G3DSA:3.40.190.10 50 371 1.3E-98 T 14-10-2018 Amir_4910 fb295189e79b5ac5660d3cbdd71854b7 372 SUPERFAMILY SSF51679 34 361 5.76E-67 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_4910 fb295189e79b5ac5660d3cbdd71854b7 372 Pfam PF00296 Luciferase-like monooxygenase 36 337 1.1E-46 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_4910 fb295189e79b5ac5660d3cbdd71854b7 372 TIGRFAM TIGR04020 seco_metab_LLM: natural product biosynthesis luciferase-like monooxygenase domain 25 362 1.1E-132 T 14-10-2018 IPR024011 Natural product biosynthesis luciferase-like monooxygenase domain Amir_4910 fb295189e79b5ac5660d3cbdd71854b7 372 Gene3D G3DSA:3.20.20.30 26 362 5.1E-90 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_0449 e6c31b8a4bffca9fa16af5a0076e51c6 447 SUPERFAMILY SSF51445 92 403 6.06E-93 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_0449 e6c31b8a4bffca9fa16af5a0076e51c6 447 SUPERFAMILY SSF55545 2 89 3.74E-13 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 Amir_0449 e6c31b8a4bffca9fa16af5a0076e51c6 447 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 92 265 2.3E-61 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Amir_0449 e6c31b8a4bffca9fa16af5a0076e51c6 447 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 270 401 9.7E-23 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Amir_0449 e6c31b8a4bffca9fa16af5a0076e51c6 447 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 26 87 4.4E-9 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal Amir_0449 e6c31b8a4bffca9fa16af5a0076e51c6 447 Gene3D G3DSA:3.20.20.80 85 431 1.1E-108 T 14-10-2018 Amir_0449 e6c31b8a4bffca9fa16af5a0076e51c6 447 Gene3D G3DSA:3.30.379.10 20 84 1.3E-11 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 Amir_0449 e6c31b8a4bffca9fa16af5a0076e51c6 447 PRINTS PR00738 Glycosyl hydrolase family 20 signature 230 248 4.0E-35 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Amir_0449 e6c31b8a4bffca9fa16af5a0076e51c6 447 PRINTS PR00738 Glycosyl hydrolase family 20 signature 85 102 4.0E-35 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Amir_0449 e6c31b8a4bffca9fa16af5a0076e51c6 447 PRINTS PR00738 Glycosyl hydrolase family 20 signature 383 400 4.0E-35 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Amir_0449 e6c31b8a4bffca9fa16af5a0076e51c6 447 PRINTS PR00738 Glycosyl hydrolase family 20 signature 114 135 4.0E-35 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Amir_0449 e6c31b8a4bffca9fa16af5a0076e51c6 447 PRINTS PR00738 Glycosyl hydrolase family 20 signature 185 202 4.0E-35 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Amir_0449 e6c31b8a4bffca9fa16af5a0076e51c6 447 PRINTS PR00738 Glycosyl hydrolase family 20 signature 252 265 4.0E-35 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Amir_0449 e6c31b8a4bffca9fa16af5a0076e51c6 447 PRINTS PR00738 Glycosyl hydrolase family 20 signature 43 63 4.0E-35 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Amir_2999 7d40acb78477d2064689c7e3cd5fb676 200 SUPERFAMILY SSF47413 8 75 1.13E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2999 7d40acb78477d2064689c7e3cd5fb676 200 Pfam PF01381 Helix-turn-helix 16 70 3.5E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_2999 7d40acb78477d2064689c7e3cd5fb676 200 SMART SM00530 15 70 2.4E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_2999 7d40acb78477d2064689c7e3cd5fb676 200 Gene3D G3DSA:1.10.260.40 9 74 3.3E-18 T 14-10-2018 Amir_2999 7d40acb78477d2064689c7e3cd5fb676 200 SUPERFAMILY SSF51182 66 176 5.57E-21 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_2999 7d40acb78477d2064689c7e3cd5fb676 200 Pfam PF07883 Cupin domain 120 177 8.3E-12 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Amir_2999 7d40acb78477d2064689c7e3cd5fb676 200 Gene3D G3DSA:2.60.120.10 87 178 6.6E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_6547 de7d8633468f8a1c81c0a6e316e446b7 152 SUPERFAMILY SSF55729 7 137 2.4E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_6547 de7d8633468f8a1c81c0a6e316e446b7 152 Gene3D G3DSA:3.40.630.30 7 151 4.8E-40 T 14-10-2018 Amir_6547 de7d8633468f8a1c81c0a6e316e446b7 152 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 15 145 2.8E-34 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 Amir_6547 de7d8633468f8a1c81c0a6e316e446b7 152 Pfam PF00583 Acetyltransferase (GNAT) family 24 125 2.2E-17 T 14-10-2018 IPR000182 GNAT domain Amir_2139 3d01fb4da67eae84c113e8bf68d0044e 510 Pfam PF00501 AMP-binding enzyme 37 407 2.1E-79 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_2139 3d01fb4da67eae84c113e8bf68d0044e 510 Gene3D G3DSA:3.40.50.12780 1 402 8.8E-94 T 14-10-2018 Amir_2139 3d01fb4da67eae84c113e8bf68d0044e 510 Pfam PF13193 AMP-binding enzyme C-terminal domain 416 491 1.7E-23 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_2139 3d01fb4da67eae84c113e8bf68d0044e 510 SUPERFAMILY SSF56801 4 503 1.57E-129 T 14-10-2018 Amir_2139 3d01fb4da67eae84c113e8bf68d0044e 510 Gene3D G3DSA:3.30.300.310 403 504 1.8E-36 T 14-10-2018 Amir_1177 13d122544e9565a09a6ba3b7a891ece7 183 SUPERFAMILY SSF88946 16 107 1.14E-15 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amir_1177 13d122544e9565a09a6ba3b7a891ece7 183 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 178 9.2E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amir_1177 13d122544e9565a09a6ba3b7a891ece7 183 Pfam PF04545 Sigma-70, region 4 129 176 9.1E-9 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amir_1177 13d122544e9565a09a6ba3b7a891ece7 183 Gene3D G3DSA:1.10.1740.10 14 93 3.5E-13 T 14-10-2018 Amir_1177 13d122544e9565a09a6ba3b7a891ece7 183 Gene3D G3DSA:1.10.10.10 114 183 3.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1177 13d122544e9565a09a6ba3b7a891ece7 183 SUPERFAMILY SSF88659 116 180 4.11E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_1177 13d122544e9565a09a6ba3b7a891ece7 183 Pfam PF04542 Sigma-70 region 2 28 96 5.7E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amir_6019 dc6f9cade48c24a17f3e4c3d542edcac 337 SUPERFAMILY SSF48179 185 330 8.33E-69 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_6019 dc6f9cade48c24a17f3e4c3d542edcac 337 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 328 3.2E-131 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Amir_6019 dc6f9cade48c24a17f3e4c3d542edcac 337 SUPERFAMILY SSF51735 4 184 7.33E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6019 dc6f9cade48c24a17f3e4c3d542edcac 337 Gene3D G3DSA:3.40.50.720 1 183 2.2E-77 T 14-10-2018 Amir_6019 dc6f9cade48c24a17f3e4c3d542edcac 337 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 179 2.2E-74 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Amir_6019 dc6f9cade48c24a17f3e4c3d542edcac 337 PIRSF PIRSF000116 204 332 9.3E-15 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Amir_6019 dc6f9cade48c24a17f3e4c3d542edcac 337 PIRSF PIRSF000116 4 208 3.5E-41 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Amir_6019 dc6f9cade48c24a17f3e4c3d542edcac 337 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 3 330 45.305 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Amir_6019 dc6f9cade48c24a17f3e4c3d542edcac 337 Gene3D G3DSA:1.10.3730.40 184 337 6.2E-71 T 14-10-2018 Amir_6019 dc6f9cade48c24a17f3e4c3d542edcac 337 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 328 1.4E-64 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Amir_4180 d18a4cbf2ff1fc3b8e9e7eb3397e3d04 315 SUPERFAMILY SSF51971 3 311 8.24E-25 T 14-10-2018 Amir_4180 d18a4cbf2ff1fc3b8e9e7eb3397e3d04 315 PIRSF PIRSF000189 1 313 7.3E-64 T 14-10-2018 IPR023209 D-amino-acid oxidase GO:0003884|GO:0046416|GO:0071949 Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Amir_4180 d18a4cbf2ff1fc3b8e9e7eb3397e3d04 315 SUPERFAMILY SSF54373 182 271 1.44E-19 T 14-10-2018 Amir_4180 d18a4cbf2ff1fc3b8e9e7eb3397e3d04 315 Gene3D G3DSA:3.30.9.10 80 269 2.2E-80 T 14-10-2018 Amir_4180 d18a4cbf2ff1fc3b8e9e7eb3397e3d04 315 Gene3D G3DSA:3.40.50.720 4 308 2.2E-80 T 14-10-2018 Amir_4180 d18a4cbf2ff1fc3b8e9e7eb3397e3d04 315 Pfam PF01266 FAD dependent oxidoreductase 4 303 9.5E-31 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Amir_1283 15fe79adffd31c40a9c6256f84fc7622 250 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 13 140 1.6E-11 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 Amir_1283 15fe79adffd31c40a9c6256f84fc7622 250 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 179 227 4.5E-6 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 Amir_1283 15fe79adffd31c40a9c6256f84fc7622 250 Gene3D G3DSA:3.60.130.10 10 230 3.1E-28 T 14-10-2018 Amir_1283 15fe79adffd31c40a9c6256f84fc7622 250 SUPERFAMILY SSF51197 15 230 9.16E-31 T 14-10-2018 Amir_2146 f02707861057361c046d5faf2663bbdd 334 Pfam PF01882 Protein of unknown function DUF58 73 157 2.9E-17 T 14-10-2018 IPR002881 Domain of unknown function DUF58 Amir_5113 9db0d47c6843b3933e5e613c534284b6 749 Gene3D G3DSA:3.20.20.80 560 665 4.7E-32 T 14-10-2018 Amir_5113 9db0d47c6843b3933e5e613c534284b6 749 Gene3D G3DSA:3.20.20.80 162 308 7.0E-34 T 14-10-2018 Amir_5113 9db0d47c6843b3933e5e613c534284b6 749 Gene3D G3DSA:3.20.20.80 402 497 2.9E-7 T 14-10-2018 Amir_5113 9db0d47c6843b3933e5e613c534284b6 749 Pfam PF00128 Alpha amylase, catalytic domain 48 226 6.4E-16 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_5113 9db0d47c6843b3933e5e613c534284b6 749 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 165 746 8.7E-188 T 14-10-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 Amir_5113 9db0d47c6843b3933e5e613c534284b6 749 SMART SM00642 41 651 5.3E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amir_5113 9db0d47c6843b3933e5e613c534284b6 749 Gene3D G3DSA:3.30.1590.10 118 161 4.2E-14 T 14-10-2018 Amir_5113 9db0d47c6843b3933e5e613c534284b6 749 SUPERFAMILY SSF51445 27 665 7.38E-120 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_5113 9db0d47c6843b3933e5e613c534284b6 749 Gene3D G3DSA:3.20.20.80 29 117 6.2E-14 T 14-10-2018 Amir_2558 581312993f8af65acfd780aceddd7461 312 Gene3D G3DSA:3.40.50.720 20 311 7.4E-76 T 14-10-2018 Amir_2558 581312993f8af65acfd780aceddd7461 312 SUPERFAMILY SSF51735 24 276 1.39E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2558 581312993f8af65acfd780aceddd7461 312 Pfam PF00106 short chain dehydrogenase 27 227 4.9E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2558 581312993f8af65acfd780aceddd7461 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2558 581312993f8af65acfd780aceddd7461 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 28 45 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2558 581312993f8af65acfd780aceddd7461 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 223 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2558 581312993f8af65acfd780aceddd7461 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 101 112 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2558 581312993f8af65acfd780aceddd7461 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 204 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4346 4292a8184106b2e79eaf1b183faa24c4 147 SUPERFAMILY SSF46785 13 143 7.34E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4346 4292a8184106b2e79eaf1b183faa24c4 147 SMART SM00347 34 130 2.8E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4346 4292a8184106b2e79eaf1b183faa24c4 147 Gene3D G3DSA:1.10.10.10 14 146 2.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4346 4292a8184106b2e79eaf1b183faa24c4 147 Pfam PF12802 MarR family 38 94 3.9E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_6847 e0bff84b60a43a0905a42cb9b24c22f5 292 Pfam PF04962 KduI/IolB family 18 269 4.1E-76 T 14-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Amir_6847 e0bff84b60a43a0905a42cb9b24c22f5 292 Gene3D G3DSA:2.60.120.10 21 125 8.4E-75 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_6847 e0bff84b60a43a0905a42cb9b24c22f5 292 PIRSF PIRSF036628 3 275 1.1E-74 T 14-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 Amir_6847 e0bff84b60a43a0905a42cb9b24c22f5 292 SUPERFAMILY SSF51182 18 253 4.26E-52 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_6847 e0bff84b60a43a0905a42cb9b24c22f5 292 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 20 270 3.5E-77 T 14-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 Amir_6847 e0bff84b60a43a0905a42cb9b24c22f5 292 Gene3D G3DSA:2.60.120.10 126 269 8.4E-75 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_3897 13d7c58347a027e0ea559db8625adca2 397 SUPERFAMILY SSF53756 3 396 2.86E-78 T 14-10-2018 Amir_3897 13d7c58347a027e0ea559db8625adca2 397 Gene3D G3DSA:3.40.50.2000 220 387 1.8E-109 T 14-10-2018 Amir_3897 13d7c58347a027e0ea559db8625adca2 397 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 124 3.6E-8 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_3897 13d7c58347a027e0ea559db8625adca2 397 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 303 379 8.3E-5 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Amir_3897 13d7c58347a027e0ea559db8625adca2 397 Gene3D G3DSA:3.40.50.2000 3 219 1.8E-109 T 14-10-2018 Amir_4000 ef70275d9601fba4d8d2532ed2b0bc36 381 Gene3D G3DSA:3.30.565.10 255 375 5.0E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4000 ef70275d9601fba4d8d2532ed2b0bc36 381 Pfam PF07730 Histidine kinase 186 246 3.7E-11 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_4000 ef70275d9601fba4d8d2532ed2b0bc36 381 SMART SM00387 287 377 1.1E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4000 ef70275d9601fba4d8d2532ed2b0bc36 381 SUPERFAMILY SSF55874 269 374 2.46E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_6164 11e6b21ddf0802e5bf579e0a12c68774 612 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 48 376 9.7E-12 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 Amir_6164 11e6b21ddf0802e5bf579e0a12c68774 612 SUPERFAMILY SSF51445 5 418 4.66E-30 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_6164 11e6b21ddf0802e5bf579e0a12c68774 612 Gene3D G3DSA:3.20.20.80 53 408 3.5E-48 T 14-10-2018 Amir_4532 39297fb701932f73c7201fc2895c842e 333 SUPERFAMILY SSF56112 9 308 2.48E-33 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_4532 39297fb701932f73c7201fc2895c842e 333 Pfam PF01636 Phosphotransferase enzyme family 32 287 2.3E-24 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_4532 39297fb701932f73c7201fc2895c842e 333 Gene3D G3DSA:3.90.1200.10 125 320 1.5E-26 T 14-10-2018 Amir_0451 02d128e4b871b3e5bbd5785b7532528b 368 Pfam PF13478 XdhC Rossmann domain 201 347 2.0E-41 T 14-10-2018 IPR027051 XdhC Rossmann domain Amir_0451 02d128e4b871b3e5bbd5785b7532528b 368 Pfam PF02625 XdhC and CoxI family 12 78 1.7E-16 T 14-10-2018 IPR003777 XdhC- CoxI Amir_0451 02d128e4b871b3e5bbd5785b7532528b 368 Pfam PF02625 XdhC and CoxI family 117 178 2.9E-15 T 14-10-2018 IPR003777 XdhC- CoxI Amir_0451 02d128e4b871b3e5bbd5785b7532528b 368 Gene3D G3DSA:3.40.50.720 200 353 1.4E-56 T 14-10-2018 Amir_2445 51e90d7a35fc02ea6eb08b05c4820dd8 482 Gene3D G3DSA:1.10.630.10 435 482 1.7E-7 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2445 51e90d7a35fc02ea6eb08b05c4820dd8 482 Gene3D G3DSA:1.10.630.10 1 202 5.0E-21 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2445 51e90d7a35fc02ea6eb08b05c4820dd8 482 Gene3D G3DSA:1.10.630.10 256 431 1.6E-26 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2445 51e90d7a35fc02ea6eb08b05c4820dd8 482 SUPERFAMILY SSF48264 22 472 7.9E-39 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_0264 b32353f90f49f5b86e51ba58b2748402 240 Gene3D G3DSA:1.10.3290.10 125 236 1.0E-6 T 14-10-2018 IPR036597 Fido-like domain superfamily Amir_0264 b32353f90f49f5b86e51ba58b2748402 240 SUPERFAMILY SSF140931 141 225 9.42E-5 T 14-10-2018 IPR036597 Fido-like domain superfamily Amir_7065 44e29118906bf5320789170e6b528680 294 SUPERFAMILY SSF46785 2 78 6.39E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_7065 44e29118906bf5320789170e6b528680 294 SUPERFAMILY SSF53850 84 285 2.65E-32 T 14-10-2018 Amir_7065 44e29118906bf5320789170e6b528680 294 Gene3D G3DSA:3.40.190.10 161 255 3.5E-36 T 14-10-2018 Amir_7065 44e29118906bf5320789170e6b528680 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 55 8.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_7065 44e29118906bf5320789170e6b528680 294 Gene3D G3DSA:1.10.10.10 1 80 4.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_7065 44e29118906bf5320789170e6b528680 294 Pfam PF03466 LysR substrate binding domain 81 280 3.1E-33 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_7065 44e29118906bf5320789170e6b528680 294 Gene3D G3DSA:3.40.190.10 84 265 3.5E-36 T 14-10-2018 Amir_6022 a35361df558813b561c677441d923483 226 Pfam PF10756 Bacterial PH domain 68 137 1.6E-10 T 14-10-2018 IPR019692 Protein of unknown function DUF2581 Amir_6022 a35361df558813b561c677441d923483 226 ProDom PD072817 ANTIGEN WEIGHT MOLECULAR LOW CFP-6 CGL1269 SEQUENCING DIRECT 31 138 3.0E-6 T 14-10-2018 IPR020535 Low molecular weight antigen Cfp6 Amir_6434 bb8520c746f8836d7f51a4e5b525401c 279 Pfam PF13560 Helix-turn-helix domain 14 74 4.1E-13 T 14-10-2018 Amir_6434 bb8520c746f8836d7f51a4e5b525401c 279 SMART SM00530 16 70 7.5E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_6434 bb8520c746f8836d7f51a4e5b525401c 279 SUPERFAMILY SSF47413 11 66 2.51E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_6434 bb8520c746f8836d7f51a4e5b525401c 279 Gene3D G3DSA:1.10.260.40 9 71 1.4E-9 T 14-10-2018 Amir_3108 d335a9588b373c4f83fa30954e9a9c43 368 Gene3D G3DSA:3.40.50.1110 30 234 1.2E-68 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_3108 d335a9588b373c4f83fa30954e9a9c43 368 SUPERFAMILY SSF50370 240 364 5.24E-42 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_3108 d335a9588b373c4f83fa30954e9a9c43 368 SUPERFAMILY SSF52266 20 226 6.62E-34 T 14-10-2018 Amir_3108 d335a9588b373c4f83fa30954e9a9c43 368 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 39 215 1.5E-18 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_3108 d335a9588b373c4f83fa30954e9a9c43 368 Gene3D G3DSA:2.80.10.50 241 331 6.3E-31 T 14-10-2018 Amir_3108 d335a9588b373c4f83fa30954e9a9c43 368 SMART SM00458 238 365 2.8E-32 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3108 d335a9588b373c4f83fa30954e9a9c43 368 Pfam PF00652 Ricin-type beta-trefoil lectin domain 241 362 1.1E-30 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3108 d335a9588b373c4f83fa30954e9a9c43 368 Gene3D G3DSA:2.80.10.50 332 367 1.4E-9 T 14-10-2018 Amir_3153 b44840959697fa90faabf6418d8e9eb4 222 SUPERFAMILY SSF46689 7 81 5.13E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3153 b44840959697fa90faabf6418d8e9eb4 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 7.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3153 b44840959697fa90faabf6418d8e9eb4 222 Gene3D G3DSA:1.10.357.10 11 221 8.5E-47 T 14-10-2018 Amir_3193 db18c477bb78003b5fc5bbeda3ac5449 670 Gene3D G3DSA:3.30.420.350 132 335 2.5E-83 T 14-10-2018 Amir_3193 db18c477bb78003b5fc5bbeda3ac5449 670 Gene3D G3DSA:3.30.420.40 26 342 2.5E-83 T 14-10-2018 Amir_3193 db18c477bb78003b5fc5bbeda3ac5449 670 Pfam PF02543 Carbamoyltransferase N-terminus 23 342 1.7E-57 T 14-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 Amir_3193 db18c477bb78003b5fc5bbeda3ac5449 670 SUPERFAMILY SSF53067 34 343 2.63E-11 T 14-10-2018 Amir_3193 db18c477bb78003b5fc5bbeda3ac5449 670 Gene3D G3DSA:3.90.870.20 380 571 1.7E-70 T 14-10-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily Amir_3193 db18c477bb78003b5fc5bbeda3ac5449 670 Pfam PF16861 Carbamoyltransferase C-terminus 400 572 9.9E-65 T 14-10-2018 IPR031730 Carbamoyltransferase, C-terminal Amir_1075 3c7e263a24e6ff1d9bd25f6466c2d320 286 SUPERFAMILY SSF48239 35 282 1.04E-9 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Amir_1075 3c7e263a24e6ff1d9bd25f6466c2d320 286 Gene3D G3DSA:1.50.10.20 29 162 9.1E-6 T 14-10-2018 Amir_3274 09303db011d068b1d3a472155f730228 261 Pfam PF08241 Methyltransferase domain 67 165 4.4E-24 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_3274 09303db011d068b1d3a472155f730228 261 SUPERFAMILY SSF53335 8 223 6.35E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3274 09303db011d068b1d3a472155f730228 261 Gene3D G3DSA:3.40.50.150 27 244 6.9E-57 T 14-10-2018 Amir_3731 a2ba5fcb7063d3f1ab1920fc91492e19 220 SMART SM01007 5 183 4.8E-50 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal Amir_3731 a2ba5fcb7063d3f1ab1920fc91492e19 220 Gene3D G3DSA:3.40.225.10 2 206 7.0E-56 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Amir_3731 a2ba5fcb7063d3f1ab1920fc91492e19 220 SUPERFAMILY SSF53639 3 207 1.65E-51 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Amir_3731 a2ba5fcb7063d3f1ab1920fc91492e19 220 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 5 182 7.4E-43 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal Amir_3604 7756887a19f003a7b5740887d7f063d7 112 Pfam PF17195 Protein of unknown function (DUF5132) 22 68 7.3E-23 T 14-10-2018 IPR033456 Protein of unknown function DUF5132 Amir_3014 0daf2da282c959735ab1b6fe1614c791 166 Gene3D G3DSA:3.40.50.360 5 141 1.7E-11 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Amir_3014 0daf2da282c959735ab1b6fe1614c791 166 SUPERFAMILY SSF52218 4 145 6.37E-12 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Amir_6959 3e82bf52c5d5cdb27527df93832c7018 211 SUPERFAMILY SSF51283 20 201 3.57E-56 T 14-10-2018 IPR036157 dUTPase-like superfamily Amir_6959 3e82bf52c5d5cdb27527df93832c7018 211 Gene3D G3DSA:2.70.40.10 19 204 4.2E-59 T 14-10-2018 IPR036157 dUTPase-like superfamily Amir_6959 3e82bf52c5d5cdb27527df93832c7018 211 Hamap MF_00146 dCTP deaminase [dcd]. 19 200 34.815 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Amir_6959 3e82bf52c5d5cdb27527df93832c7018 211 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 21 199 4.5E-63 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Amir_6959 3e82bf52c5d5cdb27527df93832c7018 211 Pfam PF00692 dUTPase 88 194 1.4E-10 T 14-10-2018 IPR029054 dUTPase-like Amir_5870 86aff8e7a6cab7824d098544b233f228 344 Pfam PF01435 Peptidase family M48 71 265 3.2E-24 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Amir_5870 86aff8e7a6cab7824d098544b233f228 344 Gene3D G3DSA:3.30.2010.10 69 152 1.0E-11 T 14-10-2018 Amir_5365 d8f1363d7db915ec16869f97f48455f2 219 Pfam PF13398 Peptidase M50B-like 10 210 6.7E-63 T 14-10-2018 Amir_0469 16e3bd496196e746828fae2983ff4e9e 224 Pfam PF06737 Transglycosylase-like domain 49 118 6.7E-33 T 14-10-2018 IPR010618 Transglycosylase-like Amir_0469 16e3bd496196e746828fae2983ff4e9e 224 SMART SM00257 176 224 7.7E-4 T 14-10-2018 IPR018392 LysM domain Amir_0469 16e3bd496196e746828fae2983ff4e9e 224 Gene3D G3DSA:3.10.350.10 176 222 2.4E-8 T 14-10-2018 IPR036779 LysM domain superfamily Amir_0469 16e3bd496196e746828fae2983ff4e9e 224 Gene3D G3DSA:1.10.530.10 28 124 9.0E-35 T 14-10-2018 Amir_0469 16e3bd496196e746828fae2983ff4e9e 224 SUPERFAMILY SSF53955 47 120 2.48E-31 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Amir_0469 16e3bd496196e746828fae2983ff4e9e 224 Pfam PF01476 LysM domain 177 221 1.1E-4 T 14-10-2018 IPR018392 LysM domain Amir_6698 d74921289ab2ba75d14f045f0672a489 290 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 12 285 5.6E-87 T 14-10-2018 Amir_6698 d74921289ab2ba75d14f045f0672a489 290 PIRSF PIRSF005355 1 290 1.3E-80 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 Amir_6698 d74921289ab2ba75d14f045f0672a489 290 Pfam PF01040 UbiA prenyltransferase family 20 262 4.1E-30 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Amir_6698 d74921289ab2ba75d14f045f0672a489 290 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 3 287 20.669 T 14-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Amir_3396 6f7fcbe7defd155c89e98dae847a1256 166 Gene3D G3DSA:2.80.10.50 30 165 1.3E-8 T 14-10-2018 Amir_3396 6f7fcbe7defd155c89e98dae847a1256 166 SUPERFAMILY SSF50370 29 164 8.9E-9 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_1436 86700f94d7b32105adeb756520d5d6f7 480 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 323 341 9.5E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_1436 86700f94d7b32105adeb756520d5d6f7 480 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 256 276 9.5E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_1436 86700f94d7b32105adeb756520d5d6f7 480 Hamap MF_00900 GTPase HflX [hflX]. 75 448 48.514 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 Amir_1436 86700f94d7b32105adeb756520d5d6f7 480 Pfam PF16360 GTP-binding GTPase Middle Region 162 248 3.0E-29 T 14-10-2018 IPR032305 GTP-binding protein, middle domain Amir_1436 86700f94d7b32105adeb756520d5d6f7 480 PIRSF PIRSF006809 24 479 2.2E-153 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 Amir_1436 86700f94d7b32105adeb756520d5d6f7 480 Pfam PF13167 GTP-binding GTPase N-terminal 72 160 2.8E-33 T 14-10-2018 IPR025121 GTPase HflX, N-terminal Amir_1436 86700f94d7b32105adeb756520d5d6f7 480 Pfam PF01926 50S ribosome-binding GTPase 256 378 4.5E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Amir_1436 86700f94d7b32105adeb756520d5d6f7 480 Gene3D G3DSA:3.40.50.11060 65 187 5.6E-42 T 14-10-2018 Amir_1436 86700f94d7b32105adeb756520d5d6f7 480 Gene3D G3DSA:3.40.50.300 253 423 2.8E-37 T 14-10-2018 Amir_1436 86700f94d7b32105adeb756520d5d6f7 480 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 56 416 9.4E-129 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 Amir_1436 86700f94d7b32105adeb756520d5d6f7 480 SUPERFAMILY SSF52540 255 452 2.94E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1650 c946e9c98244659acef7c21a712fc701 354 Pfam PF06152 Phage minor capsid protein 2 6 338 2.4E-47 T 14-10-2018 IPR009319 Bacteriophage A118, Gp4, minor capsid GO:0005198 Amir_0362 5cc6fe43c0a7efb81db9159ce5630a2b 155 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 153 30.062 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Amir_0362 5cc6fe43c0a7efb81db9159ce5630a2b 155 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 151 6.0E-47 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Amir_0362 5cc6fe43c0a7efb81db9159ce5630a2b 155 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Amir_0362 5cc6fe43c0a7efb81db9159ce5630a2b 155 Pfam PF02542 YgbB family 1 151 3.2E-46 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Amir_0362 5cc6fe43c0a7efb81db9159ce5630a2b 155 Gene3D G3DSA:3.30.1330.50 1 155 2.0E-57 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Amir_0362 5cc6fe43c0a7efb81db9159ce5630a2b 155 SUPERFAMILY SSF69765 1 152 8.76E-50 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Amir_6346 08ff35a6dfe306a7c974903717f3c0eb 296 Gene3D G3DSA:3.40.50.720 7 280 1.3E-89 T 14-10-2018 Amir_6346 08ff35a6dfe306a7c974903717f3c0eb 296 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 6 291 1.0E-84 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Amir_6346 08ff35a6dfe306a7c974903717f3c0eb 296 SUPERFAMILY SSF51735 6 291 8.02E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6346 08ff35a6dfe306a7c974903717f3c0eb 296 Pfam PF04321 RmlD substrate binding domain 6 292 7.3E-99 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Amir_6346 08ff35a6dfe306a7c974903717f3c0eb 296 Gene3D G3DSA:3.90.25.10 166 286 1.3E-89 T 14-10-2018 Amir_4054 b2caf8b8b941c1d6746b5cdd062ddbab 324 Pfam PF13280 WYL domain 141 310 1.5E-31 T 14-10-2018 IPR026881 WYL domain Amir_4054 b2caf8b8b941c1d6746b5cdd062ddbab 324 SUPERFAMILY SSF46785 3 56 1.61E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4054 b2caf8b8b941c1d6746b5cdd062ddbab 324 PIRSF PIRSF016838 1 320 4.5E-22 T 14-10-2018 IPR028349 Protein PafC Amir_4054 b2caf8b8b941c1d6746b5cdd062ddbab 324 Pfam PF08279 HTH domain 5 57 5.1E-14 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Amir_4054 b2caf8b8b941c1d6746b5cdd062ddbab 324 Gene3D G3DSA:1.10.10.10 1 61 2.8E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2067 a82902d7370804b57226f3e20119e57b 142 SUPERFAMILY SSF103196 6 130 3.84E-38 T 14-10-2018 Amir_2067 a82902d7370804b57226f3e20119e57b 142 Gene3D G3DSA:3.30.450.30 7 133 6.8E-44 T 14-10-2018 Amir_2067 a82902d7370804b57226f3e20119e57b 142 SMART SM00960 11 101 8.2E-33 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain Amir_2067 a82902d7370804b57226f3e20119e57b 142 Pfam PF03259 Roadblock/LC7 domain 11 100 3.3E-25 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain Amir_3238 f346fd82034cfd9fff354374d930df2a 198 Pfam PF10517 Electron transfer DM13 95 196 4.6E-28 T 14-10-2018 IPR019545 DM13 domain Amir_3878 f5ac4b4f9211f102c8e8431b1f7884d0 1211 Pfam PF03752 Short repeats of unknown function 669 709 1.4E-14 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_3878 f5ac4b4f9211f102c8e8431b1f7884d0 1211 Pfam PF03752 Short repeats of unknown function 20 60 2.0E-8 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_3878 f5ac4b4f9211f102c8e8431b1f7884d0 1211 Pfam PF03752 Short repeats of unknown function 66 105 1.4E-12 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_3878 f5ac4b4f9211f102c8e8431b1f7884d0 1211 Pfam PF03752 Short repeats of unknown function 576 616 1.4E-9 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_3878 f5ac4b4f9211f102c8e8431b1f7884d0 1211 Pfam PF03752 Short repeats of unknown function 159 199 4.8E-13 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_3878 f5ac4b4f9211f102c8e8431b1f7884d0 1211 Pfam PF03752 Short repeats of unknown function 112 153 9.3E-13 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_3878 f5ac4b4f9211f102c8e8431b1f7884d0 1211 Pfam PF03752 Short repeats of unknown function 715 755 1.4E-13 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_1449 5118899082dc33cb4966ba128c40ea93 295 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 81 94 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site Amir_1449 5118899082dc33cb4966ba128c40ea93 295 Gene3D G3DSA:3.40.190.10 145 245 4.4E-67 T 14-10-2018 Amir_1449 5118899082dc33cb4966ba128c40ea93 295 Gene3D G3DSA:3.40.190.10 58 277 4.4E-67 T 14-10-2018 Amir_1449 5118899082dc33cb4966ba128c40ea93 295 SUPERFAMILY SSF53850 1 277 1.61E-59 T 14-10-2018 Amir_1449 5118899082dc33cb4966ba128c40ea93 295 SMART SM00062 57 283 4.4E-64 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_1449 5118899082dc33cb4966ba128c40ea93 295 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 58 277 1.5E-53 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_4090 4519b38272b295a9bd95a5af11f9a85a 441 SUPERFAMILY SSF53448 135 359 1.88E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_4090 4519b38272b295a9bd95a5af11f9a85a 441 Gene3D G3DSA:3.90.550.10 140 390 1.0E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_4090 4519b38272b295a9bd95a5af11f9a85a 441 Pfam PF00535 Glycosyl transferase family 2 152 305 1.0E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_5969 cc60de8c652458a9e8523444cdc8232e 188 Pfam PF03602 Conserved hypothetical protein 95 2 179 9.8E-47 T 14-10-2018 Amir_5969 cc60de8c652458a9e8523444cdc8232e 188 Gene3D G3DSA:3.40.50.150 1 184 1.2E-56 T 14-10-2018 Amir_5969 cc60de8c652458a9e8523444cdc8232e 188 PIRSF PIRSF004553 1 184 1.3E-52 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Amir_5969 cc60de8c652458a9e8523444cdc8232e 188 SUPERFAMILY SSF53335 2 179 8.36E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_5969 cc60de8c652458a9e8523444cdc8232e 188 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 3 180 1.4E-45 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Amir_5092 b7a28d08adcd3f8fc19185e841fe86a3 108 Pfam PF13466 STAS domain 16 92 2.9E-13 T 14-10-2018 IPR002645 STAS domain Amir_5092 b7a28d08adcd3f8fc19185e841fe86a3 108 SUPERFAMILY SSF52091 6 108 1.04E-22 T 14-10-2018 IPR036513 STAS domain superfamily Amir_5092 b7a28d08adcd3f8fc19185e841fe86a3 108 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 105 3.7E-20 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Amir_5092 b7a28d08adcd3f8fc19185e841fe86a3 108 Gene3D G3DSA:3.30.750.24 1 108 9.4E-27 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3746 2a3c30328d14c92e82e9a9f114e8d80b 557 Pfam PF00732 GMC oxidoreductase 4 270 3.8E-12 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Amir_3746 2a3c30328d14c92e82e9a9f114e8d80b 557 Pfam PF05199 GMC oxidoreductase 453 510 2.8E-17 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Amir_3746 2a3c30328d14c92e82e9a9f114e8d80b 557 Gene3D G3DSA:3.50.50.60 430 516 5.3E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3746 2a3c30328d14c92e82e9a9f114e8d80b 557 Gene3D G3DSA:3.50.50.60 179 339 1.4E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3746 2a3c30328d14c92e82e9a9f114e8d80b 557 SUPERFAMILY SSF51905 3 515 4.49E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3746 2a3c30328d14c92e82e9a9f114e8d80b 557 Gene3D G3DSA:3.50.50.60 2 149 2.8E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4278 3fc5479e993924e5f53a4503ea385311 199 SUPERFAMILY SSF48498 91 196 1.44E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4278 3fc5479e993924e5f53a4503ea385311 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 69 1.2E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4278 3fc5479e993924e5f53a4503ea385311 199 Gene3D G3DSA:1.10.357.10 7 198 4.5E-45 T 14-10-2018 Amir_4278 3fc5479e993924e5f53a4503ea385311 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 6.8E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4278 3fc5479e993924e5f53a4503ea385311 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 6.8E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4278 3fc5479e993924e5f53a4503ea385311 199 SUPERFAMILY SSF46689 12 96 3.64E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3938 5f912f74296b3e23530996847eeeeea1 246 SUPERFAMILY SSF52833 11 186 8.27E-11 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_3938 5f912f74296b3e23530996847eeeeea1 246 Gene3D G3DSA:3.40.30.10 11 222 4.8E-57 T 14-10-2018 Amir_1211 fb409f89df4582eba8a0c86858ea74e6 305 SUPERFAMILY SSF117892 108 239 5.23E-12 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily Amir_1211 fb409f89df4582eba8a0c86858ea74e6 305 Pfam PF01145 SPFH domain / Band 7 family 77 246 5.9E-23 T 14-10-2018 IPR001107 Band 7 domain Amir_1211 fb409f89df4582eba8a0c86858ea74e6 305 SMART SM00244 73 237 1.9E-10 T 14-10-2018 IPR001107 Band 7 domain Amir_1211 fb409f89df4582eba8a0c86858ea74e6 305 Gene3D G3DSA:3.30.479.30 104 239 8.3E-10 T 14-10-2018 Amir_2319 045995b0f3c467f5ae50e9a262adf23e 129 Gene3D G3DSA:3.40.50.2300 1 121 2.1E-30 T 14-10-2018 Amir_2319 045995b0f3c467f5ae50e9a262adf23e 129 SMART SM00448 1 117 7.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2319 045995b0f3c467f5ae50e9a262adf23e 129 Pfam PF00072 Response regulator receiver domain 4 116 3.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2319 045995b0f3c467f5ae50e9a262adf23e 129 SUPERFAMILY SSF52172 2 118 1.42E-28 T 14-10-2018 IPR011006 CheY-like superfamily Amir_6609 f9debaa273fad130f2c2dfcaa5c78e2f 133 Pfam PF00237 Ribosomal protein L22p/L17e 17 119 6.5E-35 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Amir_6609 f9debaa273fad130f2c2dfcaa5c78e2f 133 ProSitePatterns PS00464 Ribosomal protein L22 signature. 95 119 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6609 f9debaa273fad130f2c2dfcaa5c78e2f 133 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 17 119 2.0E-46 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6609 f9debaa273fad130f2c2dfcaa5c78e2f 133 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 13 122 29.783 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6609 f9debaa273fad130f2c2dfcaa5c78e2f 133 Gene3D G3DSA:3.90.470.10 11 132 3.1E-48 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Amir_6609 f9debaa273fad130f2c2dfcaa5c78e2f 133 SUPERFAMILY SSF54843 7 123 1.31E-42 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Amir_4287 15a619dd81439f4c2d8eb9b1a6d11528 290 Pfam PF03239 Iron permease FTR1 family 16 266 1.6E-52 T 14-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 Amir_4189 580a64d455f689f1299720bc3dd6c931 281 SUPERFAMILY SSF53474 3 275 8.89E-60 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4189 580a64d455f689f1299720bc3dd6c931 281 Gene3D G3DSA:3.40.50.1820 2 276 6.2E-69 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4189 580a64d455f689f1299720bc3dd6c931 281 Pfam PF00561 alpha/beta hydrolase fold 25 122 1.7E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4189 580a64d455f689f1299720bc3dd6c931 281 PRINTS PR00412 Epoxide hydrolase signature 107 120 7.5E-11 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4189 580a64d455f689f1299720bc3dd6c931 281 PRINTS PR00412 Epoxide hydrolase signature 253 275 7.5E-11 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_4189 580a64d455f689f1299720bc3dd6c931 281 PRINTS PR00412 Epoxide hydrolase signature 30 48 7.5E-11 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_3423 80cf034cdde7182a28f430c63e417f2c 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 34 49 8.6E-24 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3423 80cf034cdde7182a28f430c63e417f2c 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 67 8.6E-24 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3423 80cf034cdde7182a28f430c63e417f2c 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 8.6E-24 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3423 80cf034cdde7182a28f430c63e417f2c 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 84 99 8.6E-24 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3423 80cf034cdde7182a28f430c63e417f2c 119 SUPERFAMILY SSF46785 20 112 1.31E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3423 80cf034cdde7182a28f430c63e417f2c 119 Pfam PF01022 Bacterial regulatory protein, arsR family 39 88 4.8E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3423 80cf034cdde7182a28f430c63e417f2c 119 Gene3D G3DSA:1.10.10.10 17 115 3.5E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3423 80cf034cdde7182a28f430c63e417f2c 119 SMART SM00418 32 112 1.2E-33 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_6146 b37067ccf579aad8f0639eba47e8fe05 216 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 16 207 1.6E-59 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 Amir_6146 b37067ccf579aad8f0639eba47e8fe05 216 SUPERFAMILY SSF55821 4 208 1.46E-55 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Amir_6146 b37067ccf579aad8f0639eba47e8fe05 216 Pfam PF01300 Telomere recombination 23 197 8.7E-46 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 Amir_6146 b37067ccf579aad8f0639eba47e8fe05 216 Gene3D G3DSA:3.90.870.10 2 212 5.4E-65 T 14-10-2018 Amir_2707 8b87669346532f28815f76720ea79b39 340 SUPERFAMILY SSF81345 4 335 2.35E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_2707 8b87669346532f28815f76720ea79b39 340 Gene3D G3DSA:1.10.3470.10 4 339 5.0E-94 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_2707 8b87669346532f28815f76720ea79b39 340 Pfam PF01032 FecCD transport family 18 335 7.7E-89 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_1812 34010831f30d82e02822c5ca2d3544e9 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 3.3E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_1812 34010831f30d82e02822c5ca2d3544e9 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 4 19 3.3E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_1812 34010831f30d82e02822c5ca2d3544e9 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 3.3E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_1812 34010831f30d82e02822c5ca2d3544e9 106 Gene3D G3DSA:1.10.10.10 1 98 8.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1812 34010831f30d82e02822c5ca2d3544e9 106 SMART SM00418 2 84 1.3E-21 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_1812 34010831f30d82e02822c5ca2d3544e9 106 SUPERFAMILY SSF46785 3 96 6.58E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1812 34010831f30d82e02822c5ca2d3544e9 106 Pfam PF01022 Bacterial regulatory protein, arsR family 9 57 3.2E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3006 0f6cf0306487894c3830988916ffc8df 257 SUPERFAMILY SSF52540 8 226 1.11E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3006 0f6cf0306487894c3830988916ffc8df 257 SMART SM00382 35 221 3.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3006 0f6cf0306487894c3830988916ffc8df 257 Pfam PF00005 ABC transporter 27 172 2.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3006 0f6cf0306487894c3830988916ffc8df 257 Gene3D G3DSA:3.40.50.300 6 250 1.9E-65 T 14-10-2018 Amir_4716 4961a718fb61e869b7b84c17b73ff0d9 271 SUPERFAMILY SSF52540 4 250 9.5E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4716 4961a718fb61e869b7b84c17b73ff0d9 271 Pfam PF00005 ABC transporter 21 178 5.0E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4716 4961a718fb61e869b7b84c17b73ff0d9 271 Gene3D G3DSA:3.40.50.300 1 270 3.6E-86 T 14-10-2018 Amir_4716 4961a718fb61e869b7b84c17b73ff0d9 271 PIRSF PIRSF037116 1 256 9.7E-58 T 14-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK Amir_4716 4961a718fb61e869b7b84c17b73ff0d9 271 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 262 4.9E-9 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_4716 4961a718fb61e869b7b84c17b73ff0d9 271 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_4716 4961a718fb61e869b7b84c17b73ff0d9 271 SMART SM00382 29 228 5.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3089 76e67e7f119145cac56777824a8ce914 526 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 182 1.4E-20 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Amir_3089 76e67e7f119145cac56777824a8ce914 526 SMART SM00304 211 263 8.6E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_3089 76e67e7f119145cac56777824a8ce914 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 299 328 3.5E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_3089 76e67e7f119145cac56777824a8ce914 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 3.5E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amir_3089 76e67e7f119145cac56777824a8ce914 526 SUPERFAMILY SSF58104 231 524 5.36E-57 T 14-10-2018 Amir_3089 76e67e7f119145cac56777824a8ce914 526 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 489 7.0E-29 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_3089 76e67e7f119145cac56777824a8ce914 526 Pfam PF00672 HAMP domain 214 255 2.0E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_3089 76e67e7f119145cac56777824a8ce914 526 SMART SM00283 271 525 8.3E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_3089 76e67e7f119145cac56777824a8ce914 526 Gene3D G3DSA:1.10.287.950 213 526 1.4E-59 T 14-10-2018 Amir_6705 57f9689010ba697b7fc366692473d786 292 Pfam PF13560 Helix-turn-helix domain 11 71 7.9E-10 T 14-10-2018 Amir_6705 57f9689010ba697b7fc366692473d786 292 Gene3D G3DSA:1.10.260.40 1 72 2.9E-9 T 14-10-2018 Amir_6705 57f9689010ba697b7fc366692473d786 292 SMART SM00530 15 70 9.0E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_6705 57f9689010ba697b7fc366692473d786 292 SUPERFAMILY SSF47413 6 70 6.76E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_0247 1365f9c4536e45feda2966c68fafc908 279 Gene3D G3DSA:3.90.79.10 34 267 1.2E-65 T 14-10-2018 Amir_0247 1365f9c4536e45feda2966c68fafc908 279 SUPERFAMILY SSF55811 31 234 5.08E-16 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_3028 286c312e4b134709f84647a0449a0f0a 585 SUPERFAMILY SSF51161 451 542 2.11E-9 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Amir_3028 286c312e4b134709f84647a0449a0f0a 585 Gene3D G3DSA:2.160.10.10 469 560 3.3E-6 T 14-10-2018 Amir_1596 1c065e8bfa83f60e88dbf1e95e7418c2 129 Pfam PF14078 Domain of unknown function (DUF4259) 2 115 2.8E-30 T 14-10-2018 IPR025355 Protein of unknown function DUF4259 Amir_3833 f3eadc1dde3a87fca0afa3c56b7b5a81 213 Pfam PF13649 Methyltransferase domain 64 151 1.5E-15 T 14-10-2018 Amir_3833 f3eadc1dde3a87fca0afa3c56b7b5a81 213 SUPERFAMILY SSF53335 40 193 4.65E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3833 f3eadc1dde3a87fca0afa3c56b7b5a81 213 Gene3D G3DSA:3.40.50.150 8 205 4.8E-25 T 14-10-2018 Amir_4518 936ec17eaf982bc266846428ed5334fa 192 Pfam PF12079 Protein of unknown function (DUF3558) 15 189 5.4E-30 T 14-10-2018 IPR024520 Protein of unknown function DUF3558 Amir_6735 efee914d74769bd234f4bb237a17af30 503 SUPERFAMILY SSF56801 6 501 5.49E-135 T 14-10-2018 Amir_6735 efee914d74769bd234f4bb237a17af30 503 Pfam PF13193 AMP-binding enzyme C-terminal domain 417 492 9.2E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_6735 efee914d74769bd234f4bb237a17af30 503 Gene3D G3DSA:3.40.50.12780 2 401 1.3E-103 T 14-10-2018 Amir_6735 efee914d74769bd234f4bb237a17af30 503 Pfam PF00501 AMP-binding enzyme 13 408 6.1E-89 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_6735 efee914d74769bd234f4bb237a17af30 503 Gene3D G3DSA:3.30.300.30 403 501 5.4E-28 T 14-10-2018 Amir_6735 efee914d74769bd234f4bb237a17af30 503 ProSitePatterns PS00455 Putative AMP-binding domain signature. 158 169 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_6048 594d00f10ad31ff5cd8db1ce2537473e 330 SMART SM00563 92 204 4.0E-28 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_6048 594d00f10ad31ff5cd8db1ce2537473e 330 SUPERFAMILY SSF69593 72 248 2.09E-21 T 14-10-2018 Amir_6048 594d00f10ad31ff5cd8db1ce2537473e 330 Pfam PF01553 Acyltransferase 89 201 2.3E-19 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_2389 5be5e10eefc724ab3ead5d3b7d48a0a3 311 SMART SM00530 5 81 3.6E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_2389 5be5e10eefc724ab3ead5d3b7d48a0a3 311 Gene3D G3DSA:3.30.450.180 168 273 1.5E-5 T 14-10-2018 Amir_2389 5be5e10eefc724ab3ead5d3b7d48a0a3 311 SUPERFAMILY SSF47413 29 80 3.56E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2389 5be5e10eefc724ab3ead5d3b7d48a0a3 311 Pfam PF13560 Helix-turn-helix domain 5 84 3.6E-13 T 14-10-2018 Amir_6337 617edcee67bc6e6da8a09f53d8fb6c26 359 SUPERFAMILY SSF53448 9 310 5.39E-69 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_6337 617edcee67bc6e6da8a09f53d8fb6c26 359 Gene3D G3DSA:3.90.550.10 4 239 3.5E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_6337 617edcee67bc6e6da8a09f53d8fb6c26 359 Pfam PF00483 Nucleotidyl transferase 9 235 8.7E-45 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Amir_6337 617edcee67bc6e6da8a09f53d8fb6c26 359 Gene3D G3DSA:2.160.10.10 240 357 2.8E-17 T 14-10-2018 Amir_6337 617edcee67bc6e6da8a09f53d8fb6c26 359 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 321 348 5.0E-4 T 14-10-2018 IPR001451 Hexapeptide repeat Amir_6337 617edcee67bc6e6da8a09f53d8fb6c26 359 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 255 286 1.5E-4 T 14-10-2018 IPR001451 Hexapeptide repeat Amir_3635 82ef189982cce374ea16e656353db379 216 Pfam PF06197 Protein of unknown function (DUF998) 21 184 6.9E-9 T 14-10-2018 IPR009339 Protein of unknown function DUF998 Amir_2820 ad5dddc84108365735154d184473fdc6 230 Gene3D G3DSA:3.40.50.10320 1 221 2.0E-44 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Amir_2820 ad5dddc84108365735154d184473fdc6 230 SUPERFAMILY SSF102588 1 218 1.96E-39 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Amir_2820 ad5dddc84108365735154d184473fdc6 230 Pfam PF02585 GlcNAc-PI de-N-acetylase 4 124 5.0E-20 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 Amir_0822 f78d5959f3f8e7eb2d10270170289aac 278 Pfam PF12697 Alpha/beta hydrolase family 27 265 4.6E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_0822 f78d5959f3f8e7eb2d10270170289aac 278 PRINTS PR00412 Epoxide hydrolase signature 218 234 3.1E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_0822 f78d5959f3f8e7eb2d10270170289aac 278 PRINTS PR00412 Epoxide hydrolase signature 250 272 3.1E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_0822 f78d5959f3f8e7eb2d10270170289aac 278 PRINTS PR00412 Epoxide hydrolase signature 98 111 3.1E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_0822 f78d5959f3f8e7eb2d10270170289aac 278 PRINTS PR00412 Epoxide hydrolase signature 50 65 3.1E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_0822 f78d5959f3f8e7eb2d10270170289aac 278 SUPERFAMILY SSF53474 24 270 2.94E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0822 f78d5959f3f8e7eb2d10270170289aac 278 Gene3D G3DSA:3.40.50.1820 23 272 2.8E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6279 215fb5005df623a036911836f65dbea6 392 Pfam PF03949 Malic enzyme, NAD binding domain 169 382 2.1E-18 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Amir_6279 215fb5005df623a036911836f65dbea6 392 Gene3D G3DSA:3.40.50.720 165 392 3.6E-69 T 14-10-2018 Amir_6279 215fb5005df623a036911836f65dbea6 392 SMART SM01274 22 155 5.2E-70 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Amir_6279 215fb5005df623a036911836f65dbea6 392 Gene3D G3DSA:3.40.50.10380 10 164 6.0E-61 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Amir_6279 215fb5005df623a036911836f65dbea6 392 SUPERFAMILY SSF53223 15 165 3.24E-49 T 14-10-2018 Amir_6279 215fb5005df623a036911836f65dbea6 392 Pfam PF00390 Malic enzyme, N-terminal domain 35 154 1.4E-22 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Amir_6279 215fb5005df623a036911836f65dbea6 392 PIRSF PIRSF000106 9 392 3.9E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Amir_6279 215fb5005df623a036911836f65dbea6 392 SUPERFAMILY SSF51735 167 392 1.97E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6279 215fb5005df623a036911836f65dbea6 392 SMART SM00919 167 387 1.4E-99 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Amir_0024 cd9cfb6033c942809f446f48302eb0f1 487 Pfam PF01098 Cell cycle protein 95 459 2.3E-92 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amir_6711 45cf94dd4d9e40011f1d91b68c55e069 495 SUPERFAMILY SSF52540 250 465 3.23E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6711 45cf94dd4d9e40011f1d91b68c55e069 495 Gene3D G3DSA:3.40.50.300 251 485 2.0E-30 T 14-10-2018 Amir_6711 45cf94dd4d9e40011f1d91b68c55e069 495 Pfam PF13614 AAA domain 251 393 2.6E-9 T 14-10-2018 IPR025669 AAA domain Amir_3614 e2c527e4743c0fb1d6e5ac6e09891018 156 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 16 133 1.7E-10 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 Amir_3614 e2c527e4743c0fb1d6e5ac6e09891018 156 SUPERFAMILY SSF55961 15 135 1.31E-14 T 14-10-2018 Amir_3614 e2c527e4743c0fb1d6e5ac6e09891018 156 Gene3D G3DSA:3.30.530.20 3 143 1.9E-26 T 14-10-2018 IPR023393 START-like domain superfamily Amir_0508 8b87c328fb760e7f8d87e875f5253734 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 2.0E-35 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0508 8b87c328fb760e7f8d87e875f5253734 100 Gene3D G3DSA:3.30.280.10 1 100 2.9E-47 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0508 8b87c328fb760e7f8d87e875f5253734 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 3.8E-48 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0508 8b87c328fb760e7f8d87e875f5253734 100 SUPERFAMILY SSF54111 1 99 9.68E-45 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0508 8b87c328fb760e7f8d87e875f5253734 100 Pfam PF00547 Urease, gamma subunit 1 99 3.9E-47 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0508 8b87c328fb760e7f8d87e875f5253734 100 PIRSF PIRSF001223 1 100 8.1E-51 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_0508 8b87c328fb760e7f8d87e875f5253734 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.927 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Amir_3480 5191f1d7640d537e03d6e8b967412710 101 Pfam PF10824 Excreted virulence factor EspC, type VII ESX diderm 4 95 7.8E-9 T 14-10-2018 IPR022536 ESX-1 secretion-associated protein EspC GO:0009306 Amir_1697 7f469f370bd25833c098804c0afec6c7 163 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 1 163 30.491 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Amir_1697 7f469f370bd25833c098804c0afec6c7 163 SUPERFAMILY SSF53271 2 159 8.8E-42 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Amir_1697 7f469f370bd25833c098804c0afec6c7 163 Gene3D G3DSA:3.40.50.2020 1 163 4.7E-50 T 14-10-2018 Amir_1697 7f469f370bd25833c098804c0afec6c7 163 Pfam PF00156 Phosphoribosyl transferase domain 25 133 1.4E-7 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Amir_5907 973f518d9d90af10741608f6520f7c2f 281 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 237 263 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 Amir_5907 973f518d9d90af10741608f6520f7c2f 281 Pfam PF01148 Cytidylyltransferase family 24 279 1.0E-53 T 14-10-2018 Amir_3159 e9c28310b5001bf2d2ebe6b0f9dd0b59 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 2.3E-28 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Amir_3159 e9c28310b5001bf2d2ebe6b0f9dd0b59 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 323 340 2.3E-28 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Amir_3159 e9c28310b5001bf2d2ebe6b0f9dd0b59 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 354 373 2.3E-28 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Amir_3159 e9c28310b5001bf2d2ebe6b0f9dd0b59 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 2.3E-28 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Amir_3159 e9c28310b5001bf2d2ebe6b0f9dd0b59 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 199 222 2.3E-28 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Amir_3159 e9c28310b5001bf2d2ebe6b0f9dd0b59 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 151 172 2.3E-28 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Amir_3159 e9c28310b5001bf2d2ebe6b0f9dd0b59 412 Pfam PF01566 Natural resistance-associated macrophage protein 38 384 4.8E-106 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Amir_3159 e9c28310b5001bf2d2ebe6b0f9dd0b59 412 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 20 378 6.2E-83 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Amir_4947 25e4044722b158360e8b27fb2f0b562c 551 Gene3D G3DSA:3.50.50.60 65 523 1.9E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4947 25e4044722b158360e8b27fb2f0b562c 551 Pfam PF01593 Flavin containing amine oxidoreductase 75 518 2.7E-30 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Amir_4947 25e4044722b158360e8b27fb2f0b562c 551 SUPERFAMILY SSF51905 65 521 3.88E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5853 31ddf2b693998293dbef4da35baaebb7 501 Pfam PF00271 Helicase conserved C-terminal domain 290 388 3.5E-25 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_5853 31ddf2b693998293dbef4da35baaebb7 501 SUPERFAMILY SSF52540 126 403 1.59E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5853 31ddf2b693998293dbef4da35baaebb7 501 Gene3D G3DSA:3.40.50.300 270 432 4.0E-46 T 14-10-2018 Amir_5853 31ddf2b693998293dbef4da35baaebb7 501 SMART SM00490 307 388 2.8E-31 T 14-10-2018 IPR001650 Helicase, C-terminal Amir_5853 31ddf2b693998293dbef4da35baaebb7 501 Pfam PF00270 DEAD/DEAH box helicase 78 247 7.0E-41 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amir_5853 31ddf2b693998293dbef4da35baaebb7 501 Gene3D G3DSA:3.40.50.300 26 261 8.2E-71 T 14-10-2018 Amir_5853 31ddf2b693998293dbef4da35baaebb7 501 SMART SM00487 73 273 3.7E-51 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amir_2515 c29087636441e6b00a9e6e16697f69f6 295 SUPERFAMILY SSF46689 241 290 2.96E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2515 c29087636441e6b00a9e6e16697f69f6 295 SMART SM00342 205 288 8.5E-32 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_2515 c29087636441e6b00a9e6e16697f69f6 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amir_2515 c29087636441e6b00a9e6e16697f69f6 295 Pfam PF12852 Cupin 2 175 1.5E-44 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain Amir_2515 c29087636441e6b00a9e6e16697f69f6 295 Gene3D G3DSA:1.10.10.60 184 293 6.4E-26 T 14-10-2018 Amir_2515 c29087636441e6b00a9e6e16697f69f6 295 SUPERFAMILY SSF46689 191 238 6.57E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2515 c29087636441e6b00a9e6e16697f69f6 295 Pfam PF12833 Helix-turn-helix domain 211 289 2.1E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_2641 abae69598017c3d7e21cc89b7c73b4c0 184 SUPERFAMILY SSF82607 26 105 3.01E-7 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_2641 abae69598017c3d7e21cc89b7c73b4c0 184 Pfam PF02575 YbaB/EbfC DNA-binding family 27 102 7.3E-10 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_2641 abae69598017c3d7e21cc89b7c73b4c0 184 Gene3D G3DSA:3.30.1310.10 18 113 7.6E-8 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_5788 2de3f452b6881d20cd0fc58fed21b4ca 243 Gene3D G3DSA:3.40.50.150 2 242 1.8E-43 T 14-10-2018 Amir_5788 2de3f452b6881d20cd0fc58fed21b4ca 243 Pfam PF13489 Methyltransferase domain 15 187 7.9E-16 T 14-10-2018 Amir_5788 2de3f452b6881d20cd0fc58fed21b4ca 243 SUPERFAMILY SSF53335 22 193 9.28E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_6037 68f4394c376cb38e9d67d83fd484d062 162 Pfam PF04434 SWIM zinc finger 59 81 2.7E-4 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 Amir_6232 0d5538da26bf4fd700c1b1aba825f0de 723 Gene3D G3DSA:1.20.90.10 105 189 1.4E-7 T 14-10-2018 IPR036444 Phospholipase A2 domain superfamily GO:0004623|GO:0006644|GO:0050482 KEGG: 00564+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Amir_6232 0d5538da26bf4fd700c1b1aba825f0de 723 Pfam PF09056 Prokaryotic phospholipase A2 109 184 1.9E-7 T 14-10-2018 IPR015141 Phospholipase A2, prokaryotic/fungal Amir_6232 0d5538da26bf4fd700c1b1aba825f0de 723 Pfam PF01757 Acyltransferase family 248 548 3.8E-11 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Amir_6232 0d5538da26bf4fd700c1b1aba825f0de 723 SUPERFAMILY SSF48619 108 184 1.32E-5 T 14-10-2018 IPR036444 Phospholipase A2 domain superfamily GO:0004623|GO:0006644|GO:0050482 KEGG: 00564+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Amir_0060 4795ff27d77502f7b60f39a0d1b1d6c2 141 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 138 2.6E-53 T 14-10-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 Amir_0060 4795ff27d77502f7b60f39a0d1b1d6c2 141 SUPERFAMILY SSF82784 4 132 1.09E-32 T 14-10-2018 IPR036102 OsmC/Ohr superfamily Amir_0060 4795ff27d77502f7b60f39a0d1b1d6c2 141 Gene3D G3DSA:3.30.300.20 2 139 2.7E-38 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Amir_0060 4795ff27d77502f7b60f39a0d1b1d6c2 141 Pfam PF02566 OsmC-like protein 44 136 3.1E-19 T 14-10-2018 IPR003718 OsmC/Ohr family Amir_0532 a5df9e73aabd3f4a0d6c47c7b75bc4c1 413 Pfam PF12698 ABC-2 family transporter protein 33 378 3.5E-39 T 14-10-2018 Amir_5443 7cf867cab2e52ce4b7667c686c33a92a 264 Pfam PF13344 Haloacid dehalogenase-like hydrolase 10 110 1.4E-23 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Amir_5443 7cf867cab2e52ce4b7667c686c33a92a 264 PIRSF PIRSF000915 1 263 3.5E-62 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Amir_5443 7cf867cab2e52ce4b7667c686c33a92a 264 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 11 232 1.5E-35 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Amir_5443 7cf867cab2e52ce4b7667c686c33a92a 264 SUPERFAMILY SSF56784 6 256 6.24E-57 T 14-10-2018 IPR036412 HAD-like superfamily Amir_5443 7cf867cab2e52ce4b7667c686c33a92a 264 Pfam PF13242 HAD-hyrolase-like 185 256 1.4E-18 T 14-10-2018 Amir_5443 7cf867cab2e52ce4b7667c686c33a92a 264 Gene3D G3DSA:3.40.50.1000 88 185 2.0E-76 T 14-10-2018 IPR023214 HAD superfamily Amir_5443 7cf867cab2e52ce4b7667c686c33a92a 264 Gene3D G3DSA:3.40.50.1000 10 243 2.0E-76 T 14-10-2018 IPR023214 HAD superfamily Amir_0329 7ab835b6f9b294c41b35151d881eed26 503 SUPERFAMILY SSF55681 163 501 1.24E-98 T 14-10-2018 Amir_0329 7ab835b6f9b294c41b35151d881eed26 503 Gene3D G3DSA:2.40.50.140 17 155 2.0E-38 T 14-10-2018 Amir_0329 7ab835b6f9b294c41b35151d881eed26 503 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 3.1E-32 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_0329 7ab835b6f9b294c41b35151d881eed26 503 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 3.1E-32 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_0329 7ab835b6f9b294c41b35151d881eed26 503 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 3.1E-32 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_0329 7ab835b6f9b294c41b35151d881eed26 503 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 3.1E-32 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_0329 7ab835b6f9b294c41b35151d881eed26 503 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 3.1E-32 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_0329 7ab835b6f9b294c41b35151d881eed26 503 SUPERFAMILY SSF50249 15 155 6.86E-35 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_0329 7ab835b6f9b294c41b35151d881eed26 503 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 22 503 35.488 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_0329 7ab835b6f9b294c41b35151d881eed26 503 Gene3D G3DSA:3.30.930.10 161 503 3.1E-108 T 14-10-2018 Amir_0329 7ab835b6f9b294c41b35151d881eed26 503 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 17 502 1.5E-143 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_0329 7ab835b6f9b294c41b35151d881eed26 503 Pfam PF01336 OB-fold nucleic acid binding domain 70 144 9.0E-10 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Amir_0329 7ab835b6f9b294c41b35151d881eed26 503 Pfam PF00152 tRNA synthetases class II (D, K and N) 163 500 1.6E-67 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_6849 34f6f8d46f6ca54354c62ad61ec0a6ef 255 SUPERFAMILY SSF52540 4 228 7.79E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6849 34f6f8d46f6ca54354c62ad61ec0a6ef 255 SMART SM00382 29 227 2.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6849 34f6f8d46f6ca54354c62ad61ec0a6ef 255 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_6849 34f6f8d46f6ca54354c62ad61ec0a6ef 255 Pfam PF00005 ABC transporter 20 170 8.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6849 34f6f8d46f6ca54354c62ad61ec0a6ef 255 Gene3D G3DSA:3.40.50.300 3 235 8.8E-55 T 14-10-2018 Amir_5415 e265df038d65be1cbac773187672f19e 651 SMART SM00267 260 429 4.1E-31 T 14-10-2018 IPR000160 GGDEF domain Amir_5415 e265df038d65be1cbac773187672f19e 651 SUPERFAMILY SSF141868 447 606 2.62E-10 T 14-10-2018 IPR035919 EAL domain superfamily Amir_5415 e265df038d65be1cbac773187672f19e 651 SMART SM00086 218 260 0.0014 T 14-10-2018 IPR001610 PAC motif Amir_5415 e265df038d65be1cbac773187672f19e 651 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 267 425 4.2E-20 T 14-10-2018 IPR000160 GGDEF domain Amir_5415 e265df038d65be1cbac773187672f19e 651 Gene3D G3DSA:3.30.70.270 269 440 1.1E-34 T 14-10-2018 Amir_5415 e265df038d65be1cbac773187672f19e 651 Gene3D G3DSA:3.20.20.450 441 647 2.1E-16 T 14-10-2018 IPR035919 EAL domain superfamily Amir_5415 e265df038d65be1cbac773187672f19e 651 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 424 7.6E-25 T 14-10-2018 IPR000160 GGDEF domain Amir_5415 e265df038d65be1cbac773187672f19e 651 SUPERFAMILY SSF55073 276 430 1.88E-28 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_5415 e265df038d65be1cbac773187672f19e 651 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 154 265 2.1E-8 T 14-10-2018 IPR000014 PAS domain Amir_5415 e265df038d65be1cbac773187672f19e 651 Pfam PF00563 EAL domain 447 607 3.0E-11 T 14-10-2018 IPR001633 EAL domain Amir_5415 e265df038d65be1cbac773187672f19e 651 Gene3D G3DSA:3.30.450.20 142 268 3.8E-14 T 14-10-2018 Amir_5415 e265df038d65be1cbac773187672f19e 651 SUPERFAMILY SSF55785 145 258 5.76E-13 T 14-10-2018 IPR035965 PAS domain superfamily Amir_5415 e265df038d65be1cbac773187672f19e 651 Pfam PF13188 PAS domain 157 200 2.9E-5 T 14-10-2018 IPR000014 PAS domain Amir_4821 f9a437c91da3b715b689ef726f379d66 377 Gene3D G3DSA:3.90.1510.10 45 278 2.0E-114 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 Amir_4821 f9a437c91da3b715b689ef726f379d66 377 PIRSF PIRSF006078 6 376 3.6E-115 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 Amir_4821 f9a437c91da3b715b689ef726f379d66 377 SUPERFAMILY SSF110738 7 375 5.1E-104 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 Amir_4821 f9a437c91da3b715b689ef726f379d66 377 Gene3D G3DSA:3.40.50.10350 7 364 2.0E-114 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold Amir_4821 f9a437c91da3b715b689ef726f379d66 377 Pfam PF02595 Glycerate kinase family 8 375 3.5E-121 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 Amir_4821 f9a437c91da3b715b689ef726f379d66 377 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 8 375 4.4E-109 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 Amir_0566 d6bd28949835db75b58649f018be2fdf 294 Pfam PF13560 Helix-turn-helix domain 24 84 3.2E-11 T 14-10-2018 Amir_6270 79143bcbc2b5a350d8cf3a5da0d94a0f 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 207 2.7E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_6270 79143bcbc2b5a350d8cf3a5da0d94a0f 218 SUPERFAMILY SSF161098 16 202 5.36E-28 T 14-10-2018 IPR035906 MetI-like superfamily Amir_6270 79143bcbc2b5a350d8cf3a5da0d94a0f 218 Gene3D G3DSA:1.10.3720.10 13 210 7.5E-25 T 14-10-2018 IPR035906 MetI-like superfamily Amir_6267 1082f9129e426a0c00b23ceb56f7f277 259 SMART SM00346 7 97 3.6E-20 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_6267 1082f9129e426a0c00b23ceb56f7f277 259 Pfam PF09339 IclR helix-turn-helix domain 9 56 2.2E-12 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amir_6267 1082f9129e426a0c00b23ceb56f7f277 259 SUPERFAMILY SSF55781 72 255 4.05E-41 T 14-10-2018 Amir_6267 1082f9129e426a0c00b23ceb56f7f277 259 Gene3D G3DSA:3.30.450.40 80 259 2.4E-41 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_6267 1082f9129e426a0c00b23ceb56f7f277 259 Pfam PF01614 Bacterial transcriptional regulator 126 249 3.5E-19 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Amir_6267 1082f9129e426a0c00b23ceb56f7f277 259 SUPERFAMILY SSF46785 7 80 2.52E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6267 1082f9129e426a0c00b23ceb56f7f277 259 Gene3D G3DSA:1.10.10.10 4 78 2.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0509 7a614818071f9e59879ac61e466fc17a 371 Gene3D G3DSA:1.10.580.10 78 241 1.9E-32 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Amir_0509 7a614818071f9e59879ac61e466fc17a 371 Pfam PF00285 Citrate synthase, C-terminal domain 13 61 5.3E-9 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Amir_0509 7a614818071f9e59879ac61e466fc17a 371 Pfam PF00285 Citrate synthase, C-terminal domain 111 349 1.2E-72 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Amir_0509 7a614818071f9e59879ac61e466fc17a 371 Gene3D G3DSA:1.10.580.10 5 63 1.0E-11 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Amir_0509 7a614818071f9e59879ac61e466fc17a 371 SUPERFAMILY SSF48256 9 361 7.46E-93 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Amir_0509 7a614818071f9e59879ac61e466fc17a 371 ProSitePatterns PS00480 Citrate synthase signature. 248 260 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Amir_0509 7a614818071f9e59879ac61e466fc17a 371 PRINTS PR00143 Citrate synthase signature 166 181 9.4E-24 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Amir_0509 7a614818071f9e59879ac61e466fc17a 371 PRINTS PR00143 Citrate synthase signature 320 334 9.4E-24 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Amir_0509 7a614818071f9e59879ac61e466fc17a 371 PRINTS PR00143 Citrate synthase signature 241 261 9.4E-24 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Amir_0509 7a614818071f9e59879ac61e466fc17a 371 PRINTS PR00143 Citrate synthase signature 188 216 9.4E-24 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Amir_0509 7a614818071f9e59879ac61e466fc17a 371 PRINTS PR00143 Citrate synthase signature 300 316 9.4E-24 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Amir_3057 4b404e4b18c78814385ea16f91276612 112 Pfam PF02656 Domain of unknown function (DUF202) 8 105 5.9E-9 T 14-10-2018 IPR003807 Domain of unknown function DUF202 Amir_5074 4db9affafa41629f299c5166da1dda10 267 SUPERFAMILY SSF49899 23 245 5.18E-20 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_5074 4db9affafa41629f299c5166da1dda10 267 Pfam PF00722 Glycosyl hydrolases family 16 89 226 4.9E-8 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 Amir_5074 4db9affafa41629f299c5166da1dda10 267 Gene3D G3DSA:2.60.120.200 26 262 4.9E-22 T 14-10-2018 Amir_5251 8daf54292c4ca6331edd640d6045e773 503 SUPERFAMILY SSF75005 148 336 1.23E-15 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_5251 8daf54292c4ca6331edd640d6045e773 503 Gene3D G3DSA:2.115.10.20 171 275 2.2E-6 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_5251 8daf54292c4ca6331edd640d6045e773 503 Gene3D G3DSA:2.115.10.20 60 170 9.2E-11 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_2246 b64e7064965de5dd7badf1329b7317c0 482 SMART SM00046 204 318 2.5E-4 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Amir_2246 b64e7064965de5dd7badf1329b7317c0 482 Gene3D G3DSA:2.60.200.40 317 474 4.1E-20 T 14-10-2018 Amir_2246 b64e7064965de5dd7badf1329b7317c0 482 Pfam PF00781 Diacylglycerol kinase catalytic domain 246 310 1.7E-9 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Amir_2246 b64e7064965de5dd7badf1329b7317c0 482 Pfam PF01569 PAP2 superfamily 72 182 3.8E-15 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Amir_2246 b64e7064965de5dd7badf1329b7317c0 482 SUPERFAMILY SSF111331 205 480 1.16E-42 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Amir_2246 b64e7064965de5dd7badf1329b7317c0 482 Gene3D G3DSA:3.40.50.10330 201 316 4.1E-8 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Amir_2246 b64e7064965de5dd7badf1329b7317c0 482 SMART SM00014 68 177 9.5E-21 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Amir_2246 b64e7064965de5dd7badf1329b7317c0 482 Gene3D G3DSA:1.20.144.10 100 200 6.0E-19 T 14-10-2018 Amir_2246 b64e7064965de5dd7badf1329b7317c0 482 SUPERFAMILY SSF48317 8 188 5.1E-35 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Amir_7070 cecb8a622b607d3d1b80a72b10834b86 283 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 228 241 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Amir_7070 cecb8a622b607d3d1b80a72b10834b86 283 Gene3D G3DSA:3.40.1190.20 1 281 5.2E-86 T 14-10-2018 IPR029056 Ribokinase-like Amir_7070 cecb8a622b607d3d1b80a72b10834b86 283 PRINTS PR00990 Ribokinase signature 104 117 3.4E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_7070 cecb8a622b607d3d1b80a72b10834b86 283 PRINTS PR00990 Ribokinase signature 33 52 3.4E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_7070 cecb8a622b607d3d1b80a72b10834b86 283 PRINTS PR00990 Ribokinase signature 166 181 3.4E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_7070 cecb8a622b607d3d1b80a72b10834b86 283 PRINTS PR00990 Ribokinase signature 6 27 3.4E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_7070 cecb8a622b607d3d1b80a72b10834b86 283 PRINTS PR00990 Ribokinase signature 199 210 3.4E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Amir_7070 cecb8a622b607d3d1b80a72b10834b86 283 Pfam PF00294 pfkB family carbohydrate kinase 1 276 7.4E-61 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Amir_7070 cecb8a622b607d3d1b80a72b10834b86 283 SUPERFAMILY SSF53613 1 279 2.49E-73 T 14-10-2018 IPR029056 Ribokinase-like Amir_7070 cecb8a622b607d3d1b80a72b10834b86 283 Hamap MF_01987 Ribokinase [rbsK]. 2 283 25.071 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 Amir_7030 6eb845d6b8feb144a1bd6645d57f8aa6 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 108 124 3.5E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7030 6eb845d6b8feb144a1bd6645d57f8aa6 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.5E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7030 6eb845d6b8feb144a1bd6645d57f8aa6 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 211 3.5E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7030 6eb845d6b8feb144a1bd6645d57f8aa6 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 61 72 3.5E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7030 6eb845d6b8feb144a1bd6645d57f8aa6 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 153 3.5E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7030 6eb845d6b8feb144a1bd6645d57f8aa6 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 172 3.5E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7030 6eb845d6b8feb144a1bd6645d57f8aa6 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 229 2.6E-58 T 14-10-2018 Amir_7030 6eb845d6b8feb144a1bd6645d57f8aa6 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 121 149 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_7030 6eb845d6b8feb144a1bd6645d57f8aa6 242 Gene3D G3DSA:3.40.50.720 1 235 4.0E-74 T 14-10-2018 Amir_7030 6eb845d6b8feb144a1bd6645d57f8aa6 242 SUPERFAMILY SSF51735 2 230 2.14E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_7030 6eb845d6b8feb144a1bd6645d57f8aa6 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 114 122 9.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7030 6eb845d6b8feb144a1bd6645d57f8aa6 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 61 72 9.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7030 6eb845d6b8feb144a1bd6645d57f8aa6 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 153 9.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4352 337ce922b35b3069213e0d2745828e1d 443 SUPERFAMILY SSF47384 169 244 2.16E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amir_4352 337ce922b35b3069213e0d2745828e1d 443 Gene3D G3DSA:1.10.287.130 164 250 2.0E-12 T 14-10-2018 Amir_4352 337ce922b35b3069213e0d2745828e1d 443 SUPERFAMILY SSF55874 254 398 6.55E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4352 337ce922b35b3069213e0d2745828e1d 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 291 399 4.3E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4352 337ce922b35b3069213e0d2745828e1d 443 SMART SM00388 180 249 6.3E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_4352 337ce922b35b3069213e0d2745828e1d 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 397 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4352 337ce922b35b3069213e0d2745828e1d 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 378 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4352 337ce922b35b3069213e0d2745828e1d 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 342 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amir_4352 337ce922b35b3069213e0d2745828e1d 443 SMART SM00387 291 400 6.9E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4352 337ce922b35b3069213e0d2745828e1d 443 Gene3D G3DSA:3.30.565.10 252 404 9.3E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4352 337ce922b35b3069213e0d2745828e1d 443 Pfam PF00512 His Kinase A (phospho-acceptor) domain 181 246 6.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amir_1555 07e262fb9d4e51a9c1f8613a522ccba3 1078 Pfam PF00082 Subtilase family 221 479 8.6E-54 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_1555 07e262fb9d4e51a9c1f8613a522ccba3 1078 Gene3D G3DSA:3.40.50.200 195 490 7.2E-85 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_1555 07e262fb9d4e51a9c1f8613a522ccba3 1078 SUPERFAMILY SSF52743 203 488 4.32E-78 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_1555 07e262fb9d4e51a9c1f8613a522ccba3 1078 PRINTS PR00723 Subtilisin serine protease family (S8) signature 221 240 1.3E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1555 07e262fb9d4e51a9c1f8613a522ccba3 1078 PRINTS PR00723 Subtilisin serine protease family (S8) signature 258 271 1.3E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1555 07e262fb9d4e51a9c1f8613a522ccba3 1078 PRINTS PR00723 Subtilisin serine protease family (S8) signature 429 445 1.3E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_1555 07e262fb9d4e51a9c1f8613a522ccba3 1078 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 226 237 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amir_1555 07e262fb9d4e51a9c1f8613a522ccba3 1078 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 430 440 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amir_3703 31c5a3694844b285d6e2d460a0eca71c 164 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 10 152 8.2E-20 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 Amir_6414 bb026384bcc8e855cf7132af2473ebba 423 Pfam PF01546 Peptidase family M20/M25/M40 109 418 1.7E-28 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Amir_6414 bb026384bcc8e855cf7132af2473ebba 423 PIRSF PIRSF005962 42 423 1.2E-103 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Amir_6414 bb026384bcc8e855cf7132af2473ebba 423 Gene3D G3DSA:3.40.630.10 53 407 2.6E-110 T 14-10-2018 Amir_6414 bb026384bcc8e855cf7132af2473ebba 423 SUPERFAMILY SSF55031 218 335 2.39E-18 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amir_6414 bb026384bcc8e855cf7132af2473ebba 423 Gene3D G3DSA:3.30.70.360 217 331 2.6E-110 T 14-10-2018 Amir_6414 bb026384bcc8e855cf7132af2473ebba 423 SUPERFAMILY SSF53187 42 422 4.07E-73 T 14-10-2018 Amir_6414 bb026384bcc8e855cf7132af2473ebba 423 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 54 410 9.1E-100 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Amir_6809 151703d1660f453674d4e21db430e89c 178 SUPERFAMILY SSF46689 4 84 1.05E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_6809 151703d1660f453674d4e21db430e89c 178 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6809 151703d1660f453674d4e21db430e89c 178 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6809 151703d1660f453674d4e21db430e89c 178 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 58 2.3E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6809 151703d1660f453674d4e21db430e89c 178 Gene3D G3DSA:1.10.357.10 1 142 3.8E-27 T 14-10-2018 Amir_3104 a9872af287983145d48780ac7dfa3be5 379 Gene3D G3DSA:3.40.630.30 1 126 1.5E-19 T 14-10-2018 Amir_3104 a9872af287983145d48780ac7dfa3be5 379 SUPERFAMILY SSF55729 1 224 4.76E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_3104 a9872af287983145d48780ac7dfa3be5 379 Pfam PF13527 Acetyltransferase (GNAT) domain 3 124 2.4E-17 T 14-10-2018 Amir_3267 b6c5f8b8273006c8d6619f893f97ff69 193 SUPERFAMILY SSF52402 87 147 1.0E-4 T 14-10-2018 Amir_5988 4a242ce229cd7d024fc986b1375a81ee 355 Gene3D G3DSA:3.30.470.20 217 353 1.6E-44 T 14-10-2018 Amir_5988 4a242ce229cd7d024fc986b1375a81ee 355 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 6 348 40.445 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_5988 4a242ce229cd7d024fc986b1375a81ee 355 SUPERFAMILY SSF52440 5 134 3.55E-37 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amir_5988 4a242ce229cd7d024fc986b1375a81ee 355 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 102 113 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_5988 4a242ce229cd7d024fc986b1375a81ee 355 PIRSF PIRSF039102 3 353 1.8E-108 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_5988 4a242ce229cd7d024fc986b1375a81ee 355 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 7 347 2.0E-105 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_5988 4a242ce229cd7d024fc986b1375a81ee 355 Pfam PF01820 D-ala D-ala ligase N-terminus 7 124 1.5E-30 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_5988 4a242ce229cd7d024fc986b1375a81ee 355 SUPERFAMILY SSF56059 135 348 8.42E-55 T 14-10-2018 Amir_5988 4a242ce229cd7d024fc986b1375a81ee 355 Pfam PF07478 D-ala D-ala ligase C-terminus 143 345 3.2E-66 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_5988 4a242ce229cd7d024fc986b1375a81ee 355 Gene3D G3DSA:3.30.1490.20 151 216 2.4E-26 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amir_5988 4a242ce229cd7d024fc986b1375a81ee 355 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 290 318 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amir_5988 4a242ce229cd7d024fc986b1375a81ee 355 Gene3D G3DSA:3.40.50.20 1 145 2.4E-39 T 14-10-2018 Amir_3305 1e980a4437463bb79391d1e0a0fe9c41 404 Pfam PF00583 Acetyltransferase (GNAT) family 199 257 4.5E-6 T 14-10-2018 IPR000182 GNAT domain Amir_3305 1e980a4437463bb79391d1e0a0fe9c41 404 Gene3D G3DSA:3.40.630.30 1 263 1.8E-30 T 14-10-2018 Amir_3305 1e980a4437463bb79391d1e0a0fe9c41 404 SUPERFAMILY SSF55729 10 259 1.03E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_4080 e52f80f232796ebdf669cc9c1a67b6b2 336 Gene3D G3DSA:3.40.50.720 1 327 6.7E-66 T 14-10-2018 Amir_4080 e52f80f232796ebdf669cc9c1a67b6b2 336 SUPERFAMILY SSF51735 1 323 1.15E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4080 e52f80f232796ebdf669cc9c1a67b6b2 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 195 5.0E-28 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_4080 e52f80f232796ebdf669cc9c1a67b6b2 336 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_3451 85b6a5f50cc1e24a990732fcfb5b0bac 267 TIGRFAM TIGR03843 TIGR03843: conserved hypothetical protein 13 267 2.6E-110 T 14-10-2018 IPR022292 Conserved hypothetical protein CHP03843 Amir_0654 f1b4fc77d28f0807aea9cdea0f6101f1 160 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 119 155 8.3E-9 T 14-10-2018 IPR019933 DivIVA domain Amir_0654 f1b4fc77d28f0807aea9cdea0f6101f1 160 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 36 63 7.0E-6 T 14-10-2018 IPR019933 DivIVA domain Amir_0654 f1b4fc77d28f0807aea9cdea0f6101f1 160 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 1 30 4.9E-10 T 14-10-2018 IPR019933 DivIVA domain Amir_0654 f1b4fc77d28f0807aea9cdea0f6101f1 160 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 84 110 4.0E-6 T 14-10-2018 IPR019933 DivIVA domain Amir_4293 f8e3e057944d2ab0fc005cbdea770d6a 280 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_4293 f8e3e057944d2ab0fc005cbdea770d6a 280 Pfam PF00005 ABC transporter 24 170 5.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4293 f8e3e057944d2ab0fc005cbdea770d6a 280 SMART SM00382 31 220 4.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4293 f8e3e057944d2ab0fc005cbdea770d6a 280 SUPERFAMILY SSF52540 5 240 4.35E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4293 f8e3e057944d2ab0fc005cbdea770d6a 280 Gene3D G3DSA:3.40.50.300 6 259 2.1E-65 T 14-10-2018 Amir_6218 2259027338250551691253657f27bba3 256 Pfam PF14011 EspG family 9 249 1.2E-55 T 14-10-2018 IPR025734 EspG family Amir_1369 2e71179e2de1e5ff7ce928fe18ca7db7 239 SUPERFAMILY SSF69593 3 215 1.44E-49 T 14-10-2018 Amir_1369 2e71179e2de1e5ff7ce928fe18ca7db7 239 SMART SM00563 34 153 1.8E-35 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_1369 2e71179e2de1e5ff7ce928fe18ca7db7 239 Pfam PF01553 Acyltransferase 20 150 4.6E-26 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_1755 ed9afaced65f971b2f1bebb8655ad6cd 538 SUPERFAMILY SSF58104 242 535 6.54E-63 T 14-10-2018 Amir_1755 ed9afaced65f971b2f1bebb8655ad6cd 538 Gene3D G3DSA:1.10.287.950 221 538 3.6E-67 T 14-10-2018 Amir_1755 ed9afaced65f971b2f1bebb8655ad6cd 538 SMART SM00283 282 536 3.0E-53 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_1755 ed9afaced65f971b2f1bebb8655ad6cd 538 Pfam PF00672 HAMP domain 222 270 5.1E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_1755 ed9afaced65f971b2f1bebb8655ad6cd 538 SMART SM00304 477 533 6.3 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_1755 ed9afaced65f971b2f1bebb8655ad6cd 538 SMART SM00304 222 274 3.9E-15 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_1755 ed9afaced65f971b2f1bebb8655ad6cd 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 506 5.7E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amir_5003 f43e0e2e991e489fe1b7638f23be497b 370 Pfam PF00676 Dehydrogenase E1 component 45 311 7.1E-67 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Amir_5003 f43e0e2e991e489fe1b7638f23be497b 370 Gene3D G3DSA:3.40.50.970 2 351 9.1E-104 T 14-10-2018 Amir_5003 f43e0e2e991e489fe1b7638f23be497b 370 SUPERFAMILY SSF52518 33 356 1.43E-90 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_2353 190355939c4f866ab1081d658e12d332 430 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 9 105 3.8E-18 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 Amir_2353 190355939c4f866ab1081d658e12d332 430 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 196 416 1.3E-26 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Amir_0010 abeef4a450fe4f6ea3aa56c013021dd7 143 Pfam PF07681 DoxX 12 87 2.7E-11 T 14-10-2018 IPR032808 DoxX family Amir_3840 938f7b24029d8c596f835bd82460f6fc 321 SUPERFAMILY SSF51735 21 181 2.63E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3840 938f7b24029d8c596f835bd82460f6fc 321 Gene3D G3DSA:3.40.50.720 27 301 3.4E-49 T 14-10-2018 Amir_3840 938f7b24029d8c596f835bd82460f6fc 321 Gene3D G3DSA:3.30.360.10 149 317 3.4E-49 T 14-10-2018 Amir_3840 938f7b24029d8c596f835bd82460f6fc 321 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 27 139 3.4E-19 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amir_7067 e317c4ffb13b821dc43d188d82e84571 360 SUPERFAMILY SSF46785 153 213 1.28E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3963 18ca0a4d9f22cc84d0f25e299ce800a5 314 Gene3D G3DSA:3.30.450.180 116 278 9.4E-12 T 14-10-2018 Amir_3963 18ca0a4d9f22cc84d0f25e299ce800a5 314 Gene3D G3DSA:1.10.260.40 34 93 4.3E-9 T 14-10-2018 Amir_3963 18ca0a4d9f22cc84d0f25e299ce800a5 314 Pfam PF13560 Helix-turn-helix domain 10 90 1.2E-17 T 14-10-2018 Amir_3963 18ca0a4d9f22cc84d0f25e299ce800a5 314 SMART SM00530 14 87 9.6E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_3963 18ca0a4d9f22cc84d0f25e299ce800a5 314 SUPERFAMILY SSF47413 35 87 2.64E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2116 0d609549d0ff38dff73031c5777d450b 389 Gene3D G3DSA:1.10.630.10 3 389 1.3E-108 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2116 0d609549d0ff38dff73031c5777d450b 389 Pfam PF00067 Cytochrome P450 214 368 6.3E-13 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2116 0d609549d0ff38dff73031c5777d450b 389 SUPERFAMILY SSF48264 11 386 4.98E-81 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2116 0d609549d0ff38dff73031c5777d450b 389 PRINTS PR00359 B-class P450 signature 328 337 4.0E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2116 0d609549d0ff38dff73031c5777d450b 389 PRINTS PR00359 B-class P450 signature 132 148 4.0E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2116 0d609549d0ff38dff73031c5777d450b 389 PRINTS PR00359 B-class P450 signature 86 97 4.0E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2116 0d609549d0ff38dff73031c5777d450b 389 PRINTS PR00359 B-class P450 signature 184 206 4.0E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2116 0d609549d0ff38dff73031c5777d450b 389 PRINTS PR00359 B-class P450 signature 149 164 4.0E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2116 0d609549d0ff38dff73031c5777d450b 389 PRINTS PR00359 B-class P450 signature 307 322 4.0E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2116 0d609549d0ff38dff73031c5777d450b 389 PRINTS PR00359 B-class P450 signature 337 348 4.0E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2116 0d609549d0ff38dff73031c5777d450b 389 PRINTS PR00359 B-class P450 signature 279 306 4.0E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2116 0d609549d0ff38dff73031c5777d450b 389 PRINTS PR00359 B-class P450 signature 261 272 4.0E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4383 ce2ce65019f2efc6ec867128a070bf32 281 Gene3D G3DSA:3.60.130.10 1 265 4.2E-82 T 14-10-2018 Amir_4383 ce2ce65019f2efc6ec867128a070bf32 281 SUPERFAMILY SSF51197 6 260 6.87E-84 T 14-10-2018 Amir_4383 ce2ce65019f2efc6ec867128a070bf32 281 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 8 252 8.0E-57 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 Amir_1892 266a27f5121cc6fb0d30947fa933b2d9 137 Pfam PF02566 OsmC-like protein 43 128 9.4E-12 T 14-10-2018 IPR003718 OsmC/Ohr family Amir_1892 266a27f5121cc6fb0d30947fa933b2d9 137 Gene3D G3DSA:3.30.300.20 6 130 3.0E-17 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Amir_1892 266a27f5121cc6fb0d30947fa933b2d9 137 SUPERFAMILY SSF82784 24 128 9.68E-19 T 14-10-2018 IPR036102 OsmC/Ohr superfamily Amir_6222 9e9d107cb5630ba5431c9d546f6063b0 619 Pfam PF13454 FAD-NAD(P)-binding 15 192 1.4E-38 T 14-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain Amir_6222 9e9d107cb5630ba5431c9d546f6063b0 619 SUPERFAMILY SSF51905 12 253 1.3E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5734 cd2a145d79d6b50103dfcc9528a97075 423 Gene3D G3DSA:1.20.1250.20 29 423 7.6E-69 T 14-10-2018 Amir_5734 cd2a145d79d6b50103dfcc9528a97075 423 SUPERFAMILY SSF103473 11 422 9.68E-77 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_5734 cd2a145d79d6b50103dfcc9528a97075 423 Pfam PF07690 Major Facilitator Superfamily 38 381 2.5E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_5734 cd2a145d79d6b50103dfcc9528a97075 423 ProSitePatterns PS00217 Sugar transport proteins signature 2. 127 152 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Amir_2147 3f7df9b3b596fafda7e34f8f6d32cb28 321 SUPERFAMILY SSF53300 85 283 3.53E-31 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_2147 3f7df9b3b596fafda7e34f8f6d32cb28 321 SMART SM00327 88 286 2.8E-21 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_2147 3f7df9b3b596fafda7e34f8f6d32cb28 321 Gene3D G3DSA:3.40.50.410 79 284 6.9E-45 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_2147 3f7df9b3b596fafda7e34f8f6d32cb28 321 Pfam PF00092 von Willebrand factor type A domain 91 279 2.7E-18 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_5654 22e2d4653f34ea8b60c97678a93e7fb0 397 SUPERFAMILY SSF51419 42 281 1.23E-67 T 14-10-2018 IPR029066 PLP-binding barrel Amir_5654 22e2d4653f34ea8b60c97678a93e7fb0 397 PRINTS PR01182 Ornithine decarboxylase signature 106 130 1.4E-22 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Amir_5654 22e2d4653f34ea8b60c97678a93e7fb0 397 PRINTS PR01182 Ornithine decarboxylase signature 136 158 1.4E-22 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Amir_5654 22e2d4653f34ea8b60c97678a93e7fb0 397 PRINTS PR01182 Ornithine decarboxylase signature 338 348 1.4E-22 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Amir_5654 22e2d4653f34ea8b60c97678a93e7fb0 397 PRINTS PR01182 Ornithine decarboxylase signature 36 60 1.4E-22 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Amir_5654 22e2d4653f34ea8b60c97678a93e7fb0 397 PRINTS PR01182 Ornithine decarboxylase signature 62 89 1.4E-22 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Amir_5654 22e2d4653f34ea8b60c97678a93e7fb0 397 SUPERFAMILY SSF50621 254 396 9.0E-29 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Amir_5654 22e2d4653f34ea8b60c97678a93e7fb0 397 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 45 279 8.2E-54 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Amir_5654 22e2d4653f34ea8b60c97678a93e7fb0 397 Gene3D G3DSA:2.40.37.10 32 389 9.9E-96 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Amir_5654 22e2d4653f34ea8b60c97678a93e7fb0 397 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 280 374 9.8E-9 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Amir_5654 22e2d4653f34ea8b60c97678a93e7fb0 397 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 269 288 1.6E-16 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amir_5654 22e2d4653f34ea8b60c97678a93e7fb0 397 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 186 199 1.6E-16 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amir_5654 22e2d4653f34ea8b60c97678a93e7fb0 397 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 64 82 1.6E-16 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amir_5654 22e2d4653f34ea8b60c97678a93e7fb0 397 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 84 96 1.6E-16 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amir_5654 22e2d4653f34ea8b60c97678a93e7fb0 397 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 64 82 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Amir_5654 22e2d4653f34ea8b60c97678a93e7fb0 397 Gene3D G3DSA:3.20.20.10 43 281 9.9E-96 T 14-10-2018 IPR029066 PLP-binding barrel Amir_1953 1a8136171081ea8669af39059be73ec7 492 Gene3D G3DSA:1.20.1250.20 296 485 3.3E-7 T 14-10-2018 Amir_1953 1a8136171081ea8669af39059be73ec7 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 423 442 2.8E-6 T 14-10-2018 Amir_1953 1a8136171081ea8669af39059be73ec7 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 40 64 2.8E-6 T 14-10-2018 Amir_1953 1a8136171081ea8669af39059be73ec7 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 162 186 2.8E-6 T 14-10-2018 Amir_1953 1a8136171081ea8669af39059be73ec7 492 Pfam PF07690 Major Facilitator Superfamily 43 432 1.4E-33 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_1953 1a8136171081ea8669af39059be73ec7 492 SUPERFAMILY SSF103473 24 487 1.44E-46 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_1953 1a8136171081ea8669af39059be73ec7 492 Gene3D G3DSA:1.20.1720.10 38 273 2.8E-37 T 14-10-2018 Amir_0410 4aafc76afdb9f5064bb6d20cd686dc67 262 Pfam PF05690 Thiazole biosynthesis protein ThiG 16 258 8.7E-106 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Amir_0410 4aafc76afdb9f5064bb6d20cd686dc67 262 Gene3D G3DSA:3.20.20.70 5 262 6.0E-110 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_0410 4aafc76afdb9f5064bb6d20cd686dc67 262 Hamap MF_00443 Thiazole synthase [thiG]. 13 261 41.196 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Amir_0410 4aafc76afdb9f5064bb6d20cd686dc67 262 SUPERFAMILY SSF110399 12 250 1.31E-83 T 14-10-2018 Amir_0585 41b49af9981583ddfa89410dc22e03a9 253 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 34 84 2.9E-15 T 14-10-2018 IPR027805 Transposase, Helix-turn-helix domain Amir_0585 41b49af9981583ddfa89410dc22e03a9 253 Pfam PF13359 DDE superfamily endonuclease 102 249 9.4E-26 T 14-10-2018 IPR027806 Harbinger transposase-derived nuclease domain Amir_2507 aff2b113217a0f80acd620fe839d8339 284 Pfam PF13569 Domain of unknown function (DUF4132) 27 203 1.1E-28 T 14-10-2018 IPR025406 Domain of unknown function DUF4132 Amir_3994 bb1a4fb9cabe3a7c7c3170722ce0a43f 557 Pfam PF00561 alpha/beta hydrolase fold 92 257 4.8E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_3994 bb1a4fb9cabe3a7c7c3170722ce0a43f 557 SUPERFAMILY SSF53474 87 472 5.3E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3994 bb1a4fb9cabe3a7c7c3170722ce0a43f 557 Pfam PF08386 TAP-like protein 408 501 3.9E-15 T 14-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal Amir_0252 e27ba741c692704318e5491a505753cd 432 Gene3D G3DSA:1.20.1250.20 227 409 1.2E-5 T 14-10-2018 Amir_0252 e27ba741c692704318e5491a505753cd 432 Gene3D G3DSA:1.20.1250.20 27 212 3.3E-13 T 14-10-2018 Amir_0252 e27ba741c692704318e5491a505753cd 432 Pfam PF07690 Major Facilitator Superfamily 37 329 2.0E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_0252 e27ba741c692704318e5491a505753cd 432 PRINTS PR01035 Tetracycline resistance protein signature 356 378 4.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_0252 e27ba741c692704318e5491a505753cd 432 PRINTS PR01035 Tetracycline resistance protein signature 384 404 4.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_0252 e27ba741c692704318e5491a505753cd 432 PRINTS PR01035 Tetracycline resistance protein signature 238 254 4.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_0252 e27ba741c692704318e5491a505753cd 432 PRINTS PR01035 Tetracycline resistance protein signature 267 286 4.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_0252 e27ba741c692704318e5491a505753cd 432 SUPERFAMILY SSF103473 35 405 2.62E-26 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_0858 58828e08984c33b7a34779fe2aee3907 347 Pfam PF04228 Putative neutral zinc metallopeptidase 145 338 1.2E-15 T 14-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative Amir_6950 647f7ab2b7c809d00140f703e7cef644 268 Pfam PF13349 Putative adhesin 133 263 1.5E-10 T 14-10-2018 IPR025164 Putative adhesin Amir_0872 60150c6c9b02c8723d6309f29a3f8edd 315 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 312 90.367 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Amir_0872 60150c6c9b02c8723d6309f29a3f8edd 315 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 9 267 2.0E-52 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Amir_0872 60150c6c9b02c8723d6309f29a3f8edd 315 Pfam PF03186 CobD/Cbib protein 9 290 2.7E-90 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Amir_1099 49026d80c2b88ff44324ec1704ca8e25 209 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 121 134 - T 14-10-2018 IPR033135 ClpP, histidine active site Amir_1099 49026d80c2b88ff44324ec1704ca8e25 209 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 12 203 39.943 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1099 49026d80c2b88ff44324ec1704ca8e25 209 Gene3D G3DSA:3.90.226.10 1 209 5.0E-78 T 14-10-2018 Amir_1099 49026d80c2b88ff44324ec1704ca8e25 209 Pfam PF00574 Clp protease 27 201 2.1E-77 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Amir_1099 49026d80c2b88ff44324ec1704ca8e25 209 SUPERFAMILY SSF52096 20 204 1.46E-63 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_1099 49026d80c2b88ff44324ec1704ca8e25 209 PRINTS PR00127 Clp protease catalytic subunit P signature 178 197 1.3E-43 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1099 49026d80c2b88ff44324ec1704ca8e25 209 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 1.3E-43 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1099 49026d80c2b88ff44324ec1704ca8e25 209 PRINTS PR00127 Clp protease catalytic subunit P signature 120 139 1.3E-43 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1099 49026d80c2b88ff44324ec1704ca8e25 209 PRINTS PR00127 Clp protease catalytic subunit P signature 28 43 1.3E-43 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1099 49026d80c2b88ff44324ec1704ca8e25 209 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 1.3E-43 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amir_1099 49026d80c2b88ff44324ec1704ca8e25 209 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 99 110 - T 14-10-2018 IPR018215 ClpP, Ser active site Amir_6741 deb77b8d5c6092b8448c6b60136c4137 33 Pfam PF08213 Mitochondrial domain of unknown function (DUF1713) 1 33 1.9E-9 T 14-10-2018 IPR013177 Domain of unknown function DUF1713 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6741 deb77b8d5c6092b8448c6b60136c4137 33 SMART SM01155 1 33 3.3E-6 T 14-10-2018 IPR013177 Domain of unknown function DUF1713 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_4424 98a3b7f04287a8026066dbe813ee1482 337 Pfam PF12852 Cupin 5 181 3.6E-24 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain Amir_4424 98a3b7f04287a8026066dbe813ee1482 337 Pfam PF12833 Helix-turn-helix domain 220 297 6.3E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4424 98a3b7f04287a8026066dbe813ee1482 337 SUPERFAMILY SSF46689 250 299 6.45E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4424 98a3b7f04287a8026066dbe813ee1482 337 SMART SM00342 214 297 2.6E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4424 98a3b7f04287a8026066dbe813ee1482 337 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 251 293 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amir_4424 98a3b7f04287a8026066dbe813ee1482 337 SUPERFAMILY SSF46689 197 248 1.95E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4424 98a3b7f04287a8026066dbe813ee1482 337 Gene3D G3DSA:1.10.10.60 195 303 3.0E-23 T 14-10-2018 Amir_1766 544e5f1aafbfacce6ac97bf810a69951 196 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 50 170 1.2E-15 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amir_1766 544e5f1aafbfacce6ac97bf810a69951 196 Gene3D G3DSA:3.10.180.10 46 183 6.2E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_1766 544e5f1aafbfacce6ac97bf810a69951 196 SUPERFAMILY SSF54593 46 174 1.88E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_0980 3326e3eab82dca680c5d05c490545d7a 445 Gene3D G3DSA:1.10.260.40 2 63 8.1E-10 T 14-10-2018 Amir_0980 3326e3eab82dca680c5d05c490545d7a 445 SUPERFAMILY SSF47413 3 53 1.21E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_0980 3326e3eab82dca680c5d05c490545d7a 445 Pfam PF13560 Helix-turn-helix domain 6 63 6.7E-12 T 14-10-2018 Amir_0980 3326e3eab82dca680c5d05c490545d7a 445 SMART SM00530 10 64 7.3E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_0860 239024143b25e1a0b2ceab5d4897c6b3 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Amir_0860 239024143b25e1a0b2ceab5d4897c6b3 90 SUPERFAMILY SSF47729 1 90 5.15E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Amir_0860 239024143b25e1a0b2ceab5d4897c6b3 90 SMART SM00411 1 90 1.9E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Amir_0860 239024143b25e1a0b2ceab5d4897c6b3 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 3.5E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Amir_0860 239024143b25e1a0b2ceab5d4897c6b3 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 3.5E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Amir_0860 239024143b25e1a0b2ceab5d4897c6b3 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 3.5E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Amir_0860 239024143b25e1a0b2ceab5d4897c6b3 90 Gene3D G3DSA:4.10.520.10 1 90 1.5E-35 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Amir_0860 239024143b25e1a0b2ceab5d4897c6b3 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.5E-34 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Amir_5938 7d3f23bc0892b3991076c94fb1604589 164 SUPERFAMILY SSF158694 24 162 2.75E-35 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Amir_5938 7d3f23bc0892b3991076c94fb1604589 164 Gene3D G3DSA:1.10.3330.10 8 163 2.0E-42 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Amir_5938 7d3f23bc0892b3991076c94fb1604589 164 Pfam PF09349 OHCU decarboxylase 25 158 1.7E-29 T 14-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Amir_1769 2bd2aeacae88d83977824f9582a7e46a 598 Gene3D G3DSA:1.20.120.20 371 510 3.5E-7 T 14-10-2018 Amir_5356 9e7eff4af14ccf7caca2b906884afe1d 150 Gene3D G3DSA:2.60.200.20 20 145 2.5E-39 T 14-10-2018 Amir_5356 9e7eff4af14ccf7caca2b906884afe1d 150 SMART SM00240 70 120 2.8E-17 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Amir_5356 9e7eff4af14ccf7caca2b906884afe1d 150 SUPERFAMILY SSF49879 24 141 4.02E-33 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Amir_5356 9e7eff4af14ccf7caca2b906884afe1d 150 Pfam PF00498 FHA domain 72 134 5.0E-20 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Amir_1266 8f118f6e35eca536e0f53e15eba37aaa 461 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 3 459 49.204 T 14-10-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 Amir_1266 8f118f6e35eca536e0f53e15eba37aaa 461 SUPERFAMILY SSF55681 5 370 9.12E-120 T 14-10-2018 Amir_1266 8f118f6e35eca536e0f53e15eba37aaa 461 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 158 298 2.0E-9 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amir_1266 8f118f6e35eca536e0f53e15eba37aaa 461 SUPERFAMILY SSF52954 354 458 9.82E-33 T 14-10-2018 Amir_1266 8f118f6e35eca536e0f53e15eba37aaa 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 25 39 1.5E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_1266 8f118f6e35eca536e0f53e15eba37aaa 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 191 208 1.5E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_1266 8f118f6e35eca536e0f53e15eba37aaa 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 318 330 1.5E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_1266 8f118f6e35eca536e0f53e15eba37aaa 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 159 176 1.5E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_1266 8f118f6e35eca536e0f53e15eba37aaa 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 208 218 1.5E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_1266 8f118f6e35eca536e0f53e15eba37aaa 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 404 423 1.5E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_1266 8f118f6e35eca536e0f53e15eba37aaa 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 138 150 1.5E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_1266 8f118f6e35eca536e0f53e15eba37aaa 461 Pfam PF03129 Anticodon binding domain 367 456 3.6E-23 T 14-10-2018 IPR004154 Anticodon-binding Amir_1266 8f118f6e35eca536e0f53e15eba37aaa 461 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 6 234 6.2E-80 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amir_1266 8f118f6e35eca536e0f53e15eba37aaa 461 Gene3D G3DSA:3.40.50.800 365 460 1.1E-32 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Amir_5850 03e6e085733b4b4673ccfc2fa5686f85 223 Pfam PF13545 Crp-like helix-turn-helix domain 146 220 4.4E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amir_5850 03e6e085733b4b4673ccfc2fa5686f85 223 SUPERFAMILY SSF51206 15 136 4.45E-25 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Amir_5850 03e6e085733b4b4673ccfc2fa5686f85 223 Pfam PF00027 Cyclic nucleotide-binding domain 27 111 7.9E-16 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_5850 03e6e085733b4b4673ccfc2fa5686f85 223 Gene3D G3DSA:1.10.10.10 142 223 1.9E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5850 03e6e085733b4b4673ccfc2fa5686f85 223 SMART SM00100 7 125 1.2E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_5850 03e6e085733b4b4673ccfc2fa5686f85 223 Gene3D G3DSA:2.60.120.10 1 141 1.5E-28 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_5850 03e6e085733b4b4673ccfc2fa5686f85 223 SUPERFAMILY SSF46785 144 221 1.54E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1917 24591c6eb9fa79ee9845079b848e9c45 328 Gene3D G3DSA:3.40.109.10 4 104 4.1E-41 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_1917 24591c6eb9fa79ee9845079b848e9c45 328 SUPERFAMILY SSF55469 115 325 2.44E-9 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_1917 24591c6eb9fa79ee9845079b848e9c45 328 Pfam PF00881 Nitroreductase family 116 287 9.2E-6 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amir_1917 24591c6eb9fa79ee9845079b848e9c45 328 Gene3D G3DSA:3.40.109.10 106 327 1.2E-52 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_1917 24591c6eb9fa79ee9845079b848e9c45 328 SUPERFAMILY SSF55469 6 84 5.5E-10 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_6506 6842716a5f6a2e2a0004664cdaf22eba 233 Pfam PF17270 Family of unknown function (DUF5336) 6 134 2.9E-12 T 14-10-2018 IPR035166 Protein of unknown function DUF5336 Amir_5479 d71aa8260e887028a313dc1c83b59cae 321 SUPERFAMILY SSF53613 9 289 1.37E-66 T 14-10-2018 IPR029056 Ribokinase-like Amir_5479 d71aa8260e887028a313dc1c83b59cae 321 Pfam PF00294 pfkB family carbohydrate kinase 9 289 1.2E-48 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Amir_5479 d71aa8260e887028a313dc1c83b59cae 321 Gene3D G3DSA:3.40.1190.20 8 299 3.2E-80 T 14-10-2018 IPR029056 Ribokinase-like Amir_6310 fe5f8bccd0f2be08af0368c3748057fb 261 SUPERFAMILY SSF52172 39 215 2.85E-45 T 14-10-2018 IPR011006 CheY-like superfamily Amir_6310 fe5f8bccd0f2be08af0368c3748057fb 261 SMART SM00448 39 149 7.2E-47 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6310 fe5f8bccd0f2be08af0368c3748057fb 261 Pfam PF00486 Transcriptional regulatory protein, C terminal 182 257 5.5E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_6310 fe5f8bccd0f2be08af0368c3748057fb 261 SMART SM00862 182 258 1.1E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_6310 fe5f8bccd0f2be08af0368c3748057fb 261 Pfam PF00072 Response regulator receiver domain 41 150 1.7E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6310 fe5f8bccd0f2be08af0368c3748057fb 261 Gene3D G3DSA:1.10.10.10 162 261 5.1E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6310 fe5f8bccd0f2be08af0368c3748057fb 261 Gene3D G3DSA:3.40.50.2300 24 161 1.3E-39 T 14-10-2018 Amir_2840 73b41aa1091e4b1a4d984cb33cec13f4 111 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 13 108 9.3E-11 T 14-10-2018 IPR009799 EthD domain Amir_2840 73b41aa1091e4b1a4d984cb33cec13f4 111 Pfam PF07110 EthD domain 12 97 8.7E-18 T 14-10-2018 IPR009799 EthD domain Amir_2840 73b41aa1091e4b1a4d984cb33cec13f4 111 Gene3D G3DSA:3.30.70.100 1 102 8.9E-14 T 14-10-2018 Amir_2840 73b41aa1091e4b1a4d984cb33cec13f4 111 SUPERFAMILY SSF54909 2 109 1.39E-28 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_6818 799adc8ea0c05485680e44f4134c4143 258 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_6818 799adc8ea0c05485680e44f4134c4143 258 SUPERFAMILY SSF52540 5 245 5.92E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6818 799adc8ea0c05485680e44f4134c4143 258 Gene3D G3DSA:3.40.50.300 2 256 2.0E-65 T 14-10-2018 Amir_6818 799adc8ea0c05485680e44f4134c4143 258 SMART SM00382 29 229 2.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6818 799adc8ea0c05485680e44f4134c4143 258 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 5 258 9.4E-117 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Amir_6818 799adc8ea0c05485680e44f4134c4143 258 Pfam PF00005 ABC transporter 21 176 6.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_5053 48da0f1187ea5ffdf26898b7b040733f 271 Gene3D G3DSA:3.40.50.300 4 257 4.7E-62 T 14-10-2018 Amir_5053 48da0f1187ea5ffdf26898b7b040733f 271 SMART SM00382 28 217 8.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5053 48da0f1187ea5ffdf26898b7b040733f 271 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_5053 48da0f1187ea5ffdf26898b7b040733f 271 SUPERFAMILY SSF52540 4 230 1.33E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5053 48da0f1187ea5ffdf26898b7b040733f 271 Pfam PF00005 ABC transporter 21 167 2.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0416 2b99d5f14990e0921fe8762057485d81 77 Pfam PF16827 zinc-finger 6 67 4.3E-24 T 14-10-2018 IPR031795 Putative zinc-finger containing protein Amir_6777 8cd0f76cc87d2bb39746900e875a1002 381 SUPERFAMILY SSF53383 6 379 1.13E-104 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_6777 8cd0f76cc87d2bb39746900e875a1002 381 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 189 212 3.6E-11 T 14-10-2018 Amir_6777 8cd0f76cc87d2bb39746900e875a1002 381 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 153 177 3.6E-11 T 14-10-2018 Amir_6777 8cd0f76cc87d2bb39746900e875a1002 381 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 81 101 3.6E-11 T 14-10-2018 Amir_6777 8cd0f76cc87d2bb39746900e875a1002 381 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 103 124 3.6E-11 T 14-10-2018 Amir_6777 8cd0f76cc87d2bb39746900e875a1002 381 Gene3D G3DSA:3.40.640.10 34 276 1.1E-144 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_6777 8cd0f76cc87d2bb39746900e875a1002 381 Pfam PF00155 Aminotransferase class I and II 22 376 6.5E-62 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_6777 8cd0f76cc87d2bb39746900e875a1002 381 Gene3D G3DSA:3.90.1150.10 10 376 1.1E-144 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_4522 506792dfa0408385dbbe5120821ccb30 306 Gene3D G3DSA:2.40.10.10 100 196 2.7E-51 T 14-10-2018 Amir_4522 506792dfa0408385dbbe5120821ccb30 306 Pfam PF00089 Trypsin 92 227 2.6E-9 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 Amir_4522 506792dfa0408385dbbe5120821ccb30 306 ProSitePatterns PS00673 Serine proteases, V8 family, serine active site. 246 256 - T 14-10-2018 IPR000126 Serine proteases, V8 family, serine active site GO:0006508|GO:0008236 Amir_4522 506792dfa0408385dbbe5120821ccb30 306 SUPERFAMILY SSF50494 80 302 3.79E-26 T 14-10-2018 IPR009003 Peptidase S1, PA clan Amir_4522 506792dfa0408385dbbe5120821ccb30 306 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 125 130 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 Amir_4522 506792dfa0408385dbbe5120821ccb30 306 PRINTS PR00839 V8 serine protease family signature 90 107 4.3E-16 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 Amir_4522 506792dfa0408385dbbe5120821ccb30 306 PRINTS PR00839 V8 serine protease family signature 240 256 4.3E-16 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 Amir_4522 506792dfa0408385dbbe5120821ccb30 306 PRINTS PR00839 V8 serine protease family signature 207 220 4.3E-16 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 Amir_4522 506792dfa0408385dbbe5120821ccb30 306 PRINTS PR00839 V8 serine protease family signature 114 131 4.3E-16 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 Amir_4522 506792dfa0408385dbbe5120821ccb30 306 Gene3D G3DSA:2.40.10.10 85 278 2.7E-51 T 14-10-2018 Amir_0847 0e5effa65f9944733fd78af52dc8081d 359 SUPERFAMILY SSF81324 34 160 2.09E-18 T 14-10-2018 Amir_0847 0e5effa65f9944733fd78af52dc8081d 359 SUPERFAMILY SSF51735 139 284 6.49E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0847 0e5effa65f9944733fd78af52dc8081d 359 Gene3D G3DSA:3.40.50.720 136 276 6.3E-36 T 14-10-2018 Amir_0847 0e5effa65f9944733fd78af52dc8081d 359 Pfam PF07885 Ion channel 44 123 2.2E-12 T 14-10-2018 IPR013099 Potassium channel domain Amir_0847 0e5effa65f9944733fd78af52dc8081d 359 Gene3D G3DSA:1.10.287.70 31 135 1.5E-13 T 14-10-2018 Amir_0847 0e5effa65f9944733fd78af52dc8081d 359 Pfam PF02254 TrkA-N domain 143 261 8.8E-24 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Amir_6387 09ee077e9c43ab11f53e90048069f3ff 309 Pfam PF00682 HMGL-like 21 289 4.7E-45 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Amir_6387 09ee077e9c43ab11f53e90048069f3ff 309 Gene3D G3DSA:3.20.20.70 15 309 4.7E-123 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_6387 09ee077e9c43ab11f53e90048069f3ff 309 SUPERFAMILY SSF51569 18 305 2.34E-68 T 14-10-2018 Amir_1122 bb3907ae91530c727551d7f335114512 687 Pfam PF05425 Copper resistance protein D 223 319 7.9E-18 T 14-10-2018 IPR008457 Copper resistance protein D GO:0016021 Amir_1122 bb3907ae91530c727551d7f335114512 687 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 371 616 5.3E-87 T 14-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related Amir_0054 1fe3553937dd19bddc92bad452e77987 557 SUPERFAMILY SSF53448 2 221 1.34E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0054 1fe3553937dd19bddc92bad452e77987 557 Pfam PF00535 Glycosyl transferase family 2 7 174 1.3E-23 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_0054 1fe3553937dd19bddc92bad452e77987 557 Gene3D G3DSA:3.90.550.10 1 226 7.1E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_2182 03468b631557a83cd29964a7bfc1007f 344 Gene3D G3DSA:3.40.50.1400 6 299 1.9E-111 T 14-10-2018 Amir_2182 03468b631557a83cd29964a7bfc1007f 344 Pfam PF00762 Ferrochelatase 4 302 5.2E-95 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Amir_2182 03468b631557a83cd29964a7bfc1007f 344 Gene3D G3DSA:3.40.50.1400 141 284 1.9E-111 T 14-10-2018 Amir_2182 03468b631557a83cd29964a7bfc1007f 344 SUPERFAMILY SSF53800 3 309 2.29E-82 T 14-10-2018 Amir_2182 03468b631557a83cd29964a7bfc1007f 344 TIGRFAM TIGR00109 hemH: ferrochelatase 34 302 5.1E-42 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Amir_2182 03468b631557a83cd29964a7bfc1007f 344 Hamap MF_00323 Ferrochelatase [hemH]. 2 303 31.43 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Amir_4648 17f03f242058eba08e67106b6357c982 404 SUPERFAMILY SSF56059 92 316 1.06E-38 T 14-10-2018 Amir_4648 17f03f242058eba08e67106b6357c982 404 SMART SM01209 103 282 0.0032 T 14-10-2018 Amir_4648 17f03f242058eba08e67106b6357c982 404 Pfam PF13535 ATP-grasp domain 138 284 1.0E-16 T 14-10-2018 Amir_4648 17f03f242058eba08e67106b6357c982 404 Gene3D G3DSA:3.30.470.20 96 401 2.1E-72 T 14-10-2018 Amir_1996 4b135f584010eace566dbb5ac689caad 434 SUPERFAMILY SSF53383 27 432 4.03E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_1996 4b135f584010eace566dbb5ac689caad 434 Pfam PF00202 Aminotransferase class-III 35 431 3.3E-91 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_1996 4b135f584010eace566dbb5ac689caad 434 PIRSF PIRSF000521 192 434 1.4E-28 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_1996 4b135f584010eace566dbb5ac689caad 434 PIRSF PIRSF000521 21 162 1.2E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_1996 4b135f584010eace566dbb5ac689caad 434 Gene3D G3DSA:3.40.640.10 68 331 1.9E-118 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_1996 4b135f584010eace566dbb5ac689caad 434 Gene3D G3DSA:3.90.1150.10 39 424 1.9E-118 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_4714 6a3a51f235535541292e283c50407209 439 Gene3D G3DSA:3.40.50.1820 40 431 2.1E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4714 6a3a51f235535541292e283c50407209 439 Pfam PF00561 alpha/beta hydrolase fold 61 217 4.6E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4714 6a3a51f235535541292e283c50407209 439 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 151 165 2.4E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Amir_4714 6a3a51f235535541292e283c50407209 439 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 92 103 2.4E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Amir_4714 6a3a51f235535541292e283c50407209 439 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 62 70 2.4E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Amir_4714 6a3a51f235535541292e283c50407209 439 SUPERFAMILY SSF53474 42 416 1.22E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3851 56b7992588721c15c3703ff0585bbf03 272 SUPERFAMILY SSF53474 8 265 1.24E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3851 56b7992588721c15c3703ff0585bbf03 272 Pfam PF12697 Alpha/beta hydrolase family 20 257 2.1E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_3851 56b7992588721c15c3703ff0585bbf03 272 Gene3D G3DSA:3.40.50.1820 1 266 9.3E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5875 bbfddcf3ce39caf960e73f220904d6df 646 Pfam PF01734 Patatin-like phospholipase 20 81 4.1E-6 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Amir_5875 bbfddcf3ce39caf960e73f220904d6df 646 Pfam PF01734 Patatin-like phospholipase 383 435 6.2E-7 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Amir_5875 bbfddcf3ce39caf960e73f220904d6df 646 SUPERFAMILY SSF52151 292 473 2.25E-9 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_1052 f71496de2d168fa939a61559bc1c4c78 371 Pfam PF10979 Protein of unknown function (DUF2786) 162 200 3.2E-14 T 14-10-2018 IPR024498 Domain of unknown function DUF2786 Amir_1052 f71496de2d168fa939a61559bc1c4c78 371 ProDom PD120223 SCO3432 GENE ML2604 GP79 GP77 CGL2230 MB0190 164 344 3.0E-27 T 14-10-2018 Amir_4781 77955baeadc3c8b319842cf60d7ccca3 334 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 280 3.5E-31 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amir_4781 77955baeadc3c8b319842cf60d7ccca3 334 Gene3D G3DSA:3.40.50.1100 26 132 3.0E-19 T 14-10-2018 Amir_4781 77955baeadc3c8b319842cf60d7ccca3 334 SUPERFAMILY SSF53686 28 294 5.24E-46 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amir_4781 77955baeadc3c8b319842cf60d7ccca3 334 Gene3D G3DSA:3.40.50.1100 133 297 2.3E-23 T 14-10-2018 Amir_3477 404cdde2fea4e866aa9295db12a50752 737 SMART SM00530 8 64 1.6E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_3477 404cdde2fea4e866aa9295db12a50752 737 Pfam PF05729 NACHT domain 164 315 8.8E-8 T 14-10-2018 IPR007111 NACHT nucleoside triphosphatase Amir_3477 404cdde2fea4e866aa9295db12a50752 737 SUPERFAMILY SSF47413 4 62 1.77E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3477 404cdde2fea4e866aa9295db12a50752 737 Gene3D G3DSA:1.10.260.40 4 78 1.3E-16 T 14-10-2018 Amir_3477 404cdde2fea4e866aa9295db12a50752 737 Pfam PF13560 Helix-turn-helix domain 4 67 6.2E-15 T 14-10-2018 Amir_0407 c02ae94a9900497da380a6ee49de8675 252 Pfam PF02581 Thiamine monophosphate synthase 18 160 2.6E-40 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amir_0407 c02ae94a9900497da380a6ee49de8675 252 Pfam PF02581 Thiamine monophosphate synthase 198 228 4.7E-6 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amir_0407 c02ae94a9900497da380a6ee49de8675 252 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 16 246 24.358 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amir_0407 c02ae94a9900497da380a6ee49de8675 252 SUPERFAMILY SSF51391 8 242 2.22E-53 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amir_0407 c02ae94a9900497da380a6ee49de8675 252 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 17 172 5.0E-44 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amir_0349 cb42c5cfcf40f3a392b40c3cb642ab1b 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 295 1.6E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0349 cb42c5cfcf40f3a392b40c3cb642ab1b 305 Gene3D G3DSA:1.10.3720.10 58 303 5.0E-71 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0349 cb42c5cfcf40f3a392b40c3cb642ab1b 305 SUPERFAMILY SSF161098 62 290 3.92E-60 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2821 be743a36e0a271c35397f9e57396d5f7 332 SUPERFAMILY SSF51735 2 323 8.27E-89 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2821 be743a36e0a271c35397f9e57396d5f7 332 Gene3D G3DSA:3.40.50.720 3 252 1.5E-107 T 14-10-2018 Amir_2821 be743a36e0a271c35397f9e57396d5f7 332 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 324 1.3E-103 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Amir_2821 be743a36e0a271c35397f9e57396d5f7 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 3.4E-53 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_2821 be743a36e0a271c35397f9e57396d5f7 332 Gene3D G3DSA:3.90.25.10 172 318 1.5E-107 T 14-10-2018 Amir_6600 1e5f79f9c73910848f65f668793723f1 132 Pfam PF00410 Ribosomal protein S8 5 132 3.9E-50 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6600 1e5f79f9c73910848f65f668793723f1 132 Gene3D G3DSA:3.30.1370.30 4 77 1.3E-28 T 14-10-2018 Amir_6600 1e5f79f9c73910848f65f668793723f1 132 Gene3D G3DSA:3.30.1490.10 78 132 9.3E-25 T 14-10-2018 Amir_6600 1e5f79f9c73910848f65f668793723f1 132 SUPERFAMILY SSF56047 3 132 4.58E-45 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6600 1e5f79f9c73910848f65f668793723f1 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 31.787 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_0170 4efe9997fd4a3f8b35601bcaf187b0ec 176 TIGRFAM TIGR03941 tRNA_deam_assoc: putative tRNA adenosine deaminase-associated protein 23 169 1.7E-53 T 14-10-2018 IPR023869 tRNA adenosine deaminase-associated protein, putative Amir_1132 61a7fd07bab152a3fc23834c578b9392 146 SUPERFAMILY SSF54637 4 136 8.57E-28 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_1132 61a7fd07bab152a3fc23834c578b9392 146 Pfam PF13279 Thioesterase-like superfamily 11 122 1.3E-10 T 14-10-2018 Amir_1132 61a7fd07bab152a3fc23834c578b9392 146 Gene3D G3DSA:3.10.129.10 2 142 2.2E-31 T 14-10-2018 Amir_3313 65b2b5fb6f34dca100219ac11592a340 181 Pfam PF01872 RibD C-terminal domain 6 173 1.3E-12 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Amir_3313 65b2b5fb6f34dca100219ac11592a340 181 Gene3D G3DSA:3.40.430.10 2 177 6.6E-32 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_3313 65b2b5fb6f34dca100219ac11592a340 181 SUPERFAMILY SSF53597 2 179 1.1E-23 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_5432 5e39530f684ef3842b8efb2d1e39b216 194 Pfam PF08044 Domain of unknown function (DUF1707) 7 59 2.6E-19 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 Amir_5432 5e39530f684ef3842b8efb2d1e39b216 194 Pfam PF05154 TM2 domain 129 177 2.2E-17 T 14-10-2018 IPR007829 TM2 domain Amir_4949 3a3ad7f7cf48c792073a18f916954750 385 Pfam PF13641 Glycosyltransferase like family 2 43 254 9.7E-23 T 14-10-2018 Amir_4949 3a3ad7f7cf48c792073a18f916954750 385 Gene3D G3DSA:3.90.550.10 22 253 3.4E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_4949 3a3ad7f7cf48c792073a18f916954750 385 SUPERFAMILY SSF53448 37 254 4.98E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_6440 fe1f73e08107ada2403f67ea29e4d787 142 SUPERFAMILY SSF55961 33 92 5.75E-6 T 14-10-2018 Amir_3287 6824c336dfdcc2709b047c7c1f143077 388 Gene3D G3DSA:3.40.640.10 6 250 8.7E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_3287 6824c336dfdcc2709b047c7c1f143077 388 Gene3D G3DSA:3.90.1150.10 251 388 1.5E-31 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_3287 6824c336dfdcc2709b047c7c1f143077 388 PIRSF PIRSF000390 3 388 8.0E-122 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Amir_3287 6824c336dfdcc2709b047c7c1f143077 388 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 19 373 1.9E-119 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Amir_3287 6824c336dfdcc2709b047c7c1f143077 388 SUPERFAMILY SSF53383 11 384 3.06E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_6091 20ff50d899e241ff11a9ca1bb6153ca6 339 Gene3D G3DSA:2.60.120.10 15 236 3.5E-37 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_6091 20ff50d899e241ff11a9ca1bb6153ca6 339 SUPERFAMILY SSF51182 15 331 5.86E-49 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_3947 ebebcdbaf39f9404b6d665f943ba6c5d 250 SUPERFAMILY SSF46894 178 249 1.77E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_3947 ebebcdbaf39f9404b6d665f943ba6c5d 250 SMART SM00421 186 243 9.9E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3947 ebebcdbaf39f9404b6d665f943ba6c5d 250 ProSitePatterns PS00622 LuxR-type HTH domain signature. 203 230 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3947 ebebcdbaf39f9404b6d665f943ba6c5d 250 Gene3D G3DSA:1.10.10.10 99 249 1.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3947 ebebcdbaf39f9404b6d665f943ba6c5d 250 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 203 6.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3947 ebebcdbaf39f9404b6d665f943ba6c5d 250 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 219 231 6.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3947 ebebcdbaf39f9404b6d665f943ba6c5d 250 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 203 219 6.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3947 ebebcdbaf39f9404b6d665f943ba6c5d 250 Pfam PF00196 Bacterial regulatory proteins, luxR family 188 240 3.6E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4914 08aca485a6a66be50910f4035b2917f1 445 SUPERFAMILY SSF52777 21 181 9.64E-25 T 14-10-2018 Amir_4914 08aca485a6a66be50910f4035b2917f1 445 Pfam PF00668 Condensation domain 32 335 6.5E-32 T 14-10-2018 IPR001242 Condensation domain Amir_4914 08aca485a6a66be50910f4035b2917f1 445 Gene3D G3DSA:3.30.559.10 26 380 1.5E-62 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_4914 08aca485a6a66be50910f4035b2917f1 445 SUPERFAMILY SSF52777 203 429 1.78E-27 T 14-10-2018 Amir_4914 08aca485a6a66be50910f4035b2917f1 445 Gene3D G3DSA:3.30.559.30 190 432 1.5E-62 T 14-10-2018 Amir_6012 c6a78da1b0a2499f3cd86ae9a7b303a9 217 Gene3D G3DSA:2.40.10.10 110 203 6.0E-20 T 14-10-2018 Amir_6012 c6a78da1b0a2499f3cd86ae9a7b303a9 217 Gene3D G3DSA:2.40.10.10 44 214 6.0E-20 T 14-10-2018 Amir_6012 c6a78da1b0a2499f3cd86ae9a7b303a9 217 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 122 142 3.4E-10 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_6012 c6a78da1b0a2499f3cd86ae9a7b303a9 217 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 143 160 3.4E-10 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_6012 c6a78da1b0a2499f3cd86ae9a7b303a9 217 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 162 185 3.4E-10 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_6012 c6a78da1b0a2499f3cd86ae9a7b303a9 217 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 186 200 3.4E-10 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Amir_4586 e76c40b491ad270367481895dbc414ea 184 Gene3D G3DSA:3.40.630.30 1 178 2.0E-48 T 14-10-2018 Amir_4586 e76c40b491ad270367481895dbc414ea 184 Pfam PF13302 Acetyltransferase (GNAT) domain 6 144 2.1E-31 T 14-10-2018 IPR000182 GNAT domain Amir_4586 e76c40b491ad270367481895dbc414ea 184 SUPERFAMILY SSF55729 1 168 6.6E-45 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_0535 095b7d74ad1ea2c047d6bcfb9254dd0a 147 SUPERFAMILY SSF82607 9 95 1.7E-9 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_0535 095b7d74ad1ea2c047d6bcfb9254dd0a 147 Gene3D G3DSA:3.30.1310.10 5 105 6.1E-9 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_0535 095b7d74ad1ea2c047d6bcfb9254dd0a 147 Pfam PF02575 YbaB/EbfC DNA-binding family 12 97 2.0E-12 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_6613 6d83c96cd2b02e5b74c2dbdf4553763c 231 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 203 7.9E-68 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6613 6d83c96cd2b02e5b74c2dbdf4553763c 231 SUPERFAMILY SSF52166 4 205 1.7E-71 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Amir_6613 6d83c96cd2b02e5b74c2dbdf4553763c 231 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 10 209 32.186 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6613 6d83c96cd2b02e5b74c2dbdf4553763c 231 Pfam PF00573 Ribosomal protein L4/L1 family 18 203 8.6E-61 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Amir_6613 6d83c96cd2b02e5b74c2dbdf4553763c 231 Gene3D G3DSA:3.40.1370.10 1 213 1.7E-70 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Amir_4316 c836455edfd8ce87e89b9c76f258850c 320 SUPERFAMILY SSF52317 1 196 8.18E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_4316 c836455edfd8ce87e89b9c76f258850c 320 Gene3D G3DSA:1.10.10.60 213 316 1.6E-31 T 14-10-2018 Amir_4316 c836455edfd8ce87e89b9c76f258850c 320 SMART SM00342 229 312 8.4E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4316 c836455edfd8ce87e89b9c76f258850c 320 SUPERFAMILY SSF46689 215 263 9.96E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4316 c836455edfd8ce87e89b9c76f258850c 320 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 266 308 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amir_4316 c836455edfd8ce87e89b9c76f258850c 320 SUPERFAMILY SSF46689 266 315 8.08E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4316 c836455edfd8ce87e89b9c76f258850c 320 Pfam PF01965 DJ-1/PfpI family 2 175 3.4E-12 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Amir_4316 c836455edfd8ce87e89b9c76f258850c 320 Pfam PF12833 Helix-turn-helix domain 235 313 2.3E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4316 c836455edfd8ce87e89b9c76f258850c 320 Gene3D G3DSA:3.40.50.880 1 211 6.9E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_5486 306cf988b1999ac8c43cf3b8eb3eee9a 225 SMART SM00849 36 204 2.6E-29 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_5486 306cf988b1999ac8c43cf3b8eb3eee9a 225 SUPERFAMILY SSF56281 25 221 3.93E-45 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_5486 306cf988b1999ac8c43cf3b8eb3eee9a 225 Pfam PF00753 Metallo-beta-lactamase superfamily 33 191 5.0E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_5486 306cf988b1999ac8c43cf3b8eb3eee9a 225 Gene3D G3DSA:3.60.15.10 23 223 1.7E-47 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_2919 32d22ff0ea0c36c640a56859700bf30b 310 SUPERFAMILY SSF161098 71 297 2.88E-66 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2919 32d22ff0ea0c36c640a56859700bf30b 310 Gene3D G3DSA:1.10.3720.10 67 308 8.1E-79 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2919 32d22ff0ea0c36c640a56859700bf30b 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 307 3.8E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0082 c6d091b49af4608a84da4e146e90034d 187 SUPERFAMILY SSF47240 13 159 2.29E-46 T 14-10-2018 IPR009078 Ferritin-like superfamily Amir_0082 c6d091b49af4608a84da4e146e90034d 187 Pfam PF00210 Ferritin-like domain 18 153 3.7E-36 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Amir_0082 c6d091b49af4608a84da4e146e90034d 187 Gene3D G3DSA:1.20.1260.10 9 187 4.5E-51 T 14-10-2018 IPR012347 Ferritin-like Amir_7064 a82a7ee30353bc5b3dee1378ce89fea6 394 Gene3D G3DSA:3.40.640.10 58 294 2.9E-133 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_7064 a82a7ee30353bc5b3dee1378ce89fea6 394 SUPERFAMILY SSF53383 7 391 9.31E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_7064 a82a7ee30353bc5b3dee1378ce89fea6 394 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 393 53.84 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 Amir_7064 a82a7ee30353bc5b3dee1378ce89fea6 394 Gene3D G3DSA:3.90.1150.10 42 385 2.9E-133 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_7064 a82a7ee30353bc5b3dee1378ce89fea6 394 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 239 248 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Amir_7064 a82a7ee30353bc5b3dee1378ce89fea6 394 Pfam PF00155 Aminotransferase class I and II 44 385 3.7E-66 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_7064 a82a7ee30353bc5b3dee1378ce89fea6 394 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 388 4.0E-193 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 Amir_5470 46c24052e2b2385a7b54e0301aac54e5 282 SUPERFAMILY SSF55315 19 116 3.65E-19 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Amir_5470 46c24052e2b2385a7b54e0301aac54e5 282 SUPERFAMILY SSF75217 107 281 2.22E-38 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Amir_5470 46c24052e2b2385a7b54e0301aac54e5 282 SMART SM00967 41 119 2.7E-17 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Amir_5470 46c24052e2b2385a7b54e0301aac54e5 282 Pfam PF00588 SpoU rRNA Methylase family 130 274 2.9E-33 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Amir_5470 46c24052e2b2385a7b54e0301aac54e5 282 Gene3D G3DSA:3.40.1280.10 121 282 1.4E-48 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Amir_5470 46c24052e2b2385a7b54e0301aac54e5 282 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 41 117 8.8E-15 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Amir_5470 46c24052e2b2385a7b54e0301aac54e5 282 Gene3D G3DSA:3.30.1330.30 17 115 6.5E-14 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Amir_4663 311c3e747ffeebb4641f3aeb31862feb 334 Pfam PF01095 Pectinesterase 34 326 2.0E-37 T 14-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 Amir_4663 311c3e747ffeebb4641f3aeb31862feb 334 SUPERFAMILY SSF51126 29 332 1.29E-61 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_4663 311c3e747ffeebb4641f3aeb31862feb 334 Gene3D G3DSA:2.160.20.10 6 302 2.6E-76 T 14-10-2018 IPR012334 Pectin lyase fold Amir_0533 d2c21b185be7214272123a3cfab8f113 317 SUPERFAMILY SSF52540 18 235 3.62E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0533 d2c21b185be7214272123a3cfab8f113 317 SMART SM00382 43 222 9.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0533 d2c21b185be7214272123a3cfab8f113 317 Pfam PF13732 Domain of unknown function (DUF4162) 228 310 7.6E-8 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 Amir_0533 d2c21b185be7214272123a3cfab8f113 317 Pfam PF00005 ABC transporter 34 174 1.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0533 d2c21b185be7214272123a3cfab8f113 317 Gene3D G3DSA:3.40.50.300 11 243 1.5E-63 T 14-10-2018 Amir_0533 d2c21b185be7214272123a3cfab8f113 317 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_1197 8d3790dfbac830329b5358490713998a 197 Gene3D G3DSA:3.40.50.620 2 195 5.2E-62 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_1197 8d3790dfbac830329b5358490713998a 197 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 4 194 30.012 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Amir_1197 8d3790dfbac830329b5358490713998a 197 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 8 193 1.5E-53 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Amir_1197 8d3790dfbac830329b5358490713998a 197 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 70 2.6E-10 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Amir_1197 8d3790dfbac830329b5358490713998a 197 Pfam PF01467 Cytidylyltransferase-like 8 168 4.1E-29 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Amir_1197 8d3790dfbac830329b5358490713998a 197 SUPERFAMILY SSF52374 4 195 2.53E-53 T 14-10-2018 Amir_6060 a206b95dc58904193c3f787f4746fcd9 142 Gene3D G3DSA:3.90.190.10 33 139 2.1E-15 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Amir_6060 a206b95dc58904193c3f787f4746fcd9 142 SUPERFAMILY SSF52799 47 136 2.55E-17 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Amir_6060 a206b95dc58904193c3f787f4746fcd9 142 Pfam PF00102 Protein-tyrosine phosphatase 45 110 1.3E-4 T 14-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 Amir_1000 508a78340a6ac2eafcf696abb1291c39 57 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 19 50 1.3E-6 T 14-10-2018 Amir_0486 28ccc7c7e879e885920398a4b9806f44 942 SUPERFAMILY SSF55874 43 130 5.12E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0190 7d30e21715f67119a32be39387596655 125 SUPERFAMILY SSF52206 46 122 6.54E-5 T 14-10-2018 IPR036490 Hypothetical protein MTH538 superfamily Amir_0190 7d30e21715f67119a32be39387596655 125 Pfam PF13676 TIR domain 7 107 1.3E-7 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 Amir_2130 64512d36e448d5211661ac2ddb039138 127 Gene3D G3DSA:1.10.101.10 44 123 2.2E-8 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Amir_2130 64512d36e448d5211661ac2ddb039138 127 SUPERFAMILY SSF47090 41 120 5.76E-8 T 14-10-2018 IPR036365 PGBD-like superfamily Amir_3922 c2c86e81f815a8d8e8a60a3e598ab349 335 SUPERFAMILY SSF52266 61 325 2.66E-13 T 14-10-2018 Amir_1577 2a3b2726776001f5ab54c3d565556ebb 514 Pfam PF08386 TAP-like protein 414 512 4.1E-21 T 14-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal Amir_1577 2a3b2726776001f5ab54c3d565556ebb 514 SUPERFAMILY SSF53474 120 487 1.01E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1577 2a3b2726776001f5ab54c3d565556ebb 514 Pfam PF00561 alpha/beta hydrolase fold 139 307 6.5E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_3217 d6bc7f0dfd0531f0bf5cf3d5189c793d 73 Gene3D G3DSA:3.30.10.10 5 73 7.8E-24 T 14-10-2018 Amir_3217 d6bc7f0dfd0531f0bf5cf3d5189c793d 73 Pfam PF00280 Potato inhibitor I family 11 73 1.0E-21 T 14-10-2018 IPR000864 Proteinase inhibitor I13, potato inhibitor I GO:0004867|GO:0009611 Amir_3217 d6bc7f0dfd0531f0bf5cf3d5189c793d 73 SUPERFAMILY SSF54654 9 73 3.79E-19 T 14-10-2018 IPR036354 Proteinase inhibitor I13, potato inhibitor I superfamily Amir_3217 d6bc7f0dfd0531f0bf5cf3d5189c793d 73 PRINTS PR00292 Potato inhibitor I signature 38 49 1.1E-9 T 14-10-2018 IPR000864 Proteinase inhibitor I13, potato inhibitor I GO:0004867|GO:0009611 Amir_3217 d6bc7f0dfd0531f0bf5cf3d5189c793d 73 PRINTS PR00292 Potato inhibitor I signature 13 26 1.1E-9 T 14-10-2018 IPR000864 Proteinase inhibitor I13, potato inhibitor I GO:0004867|GO:0009611 Amir_3217 d6bc7f0dfd0531f0bf5cf3d5189c793d 73 PRINTS PR00292 Potato inhibitor I signature 50 60 1.1E-9 T 14-10-2018 IPR000864 Proteinase inhibitor I13, potato inhibitor I GO:0004867|GO:0009611 Amir_3217 d6bc7f0dfd0531f0bf5cf3d5189c793d 73 ProDom PD002604 INHIBITOR PROTEASE PROTEINASE SERINE I DIRECT SEQUENCING PRECURSOR SIGNAL MPI 13 73 7.0E-11 T 14-10-2018 IPR000864 Proteinase inhibitor I13, potato inhibitor I GO:0004867|GO:0009611 Amir_3489 4e61e91236a04f781b24012eef13c94e 200 SUPERFAMILY SSF48498 80 188 5.72E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3489 4e61e91236a04f781b24012eef13c94e 200 Gene3D G3DSA:1.10.357.10 3 191 2.2E-33 T 14-10-2018 Amir_3489 4e61e91236a04f781b24012eef13c94e 200 SUPERFAMILY SSF46689 9 76 7.18E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3489 4e61e91236a04f781b24012eef13c94e 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 60 1.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6820 00dd6ca985c30bf285ded8a525dc64ff 352 Gene3D G3DSA:1.10.3720.10 104 347 2.8E-27 T 14-10-2018 IPR035906 MetI-like superfamily Amir_6820 00dd6ca985c30bf285ded8a525dc64ff 352 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 50 346 3.4E-84 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Amir_6820 00dd6ca985c30bf285ded8a525dc64ff 352 SUPERFAMILY SSF161098 76 341 3.38E-29 T 14-10-2018 IPR035906 MetI-like superfamily Amir_6820 00dd6ca985c30bf285ded8a525dc64ff 352 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 131 344 1.3E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_3175 5b118f0e1ad86f84c6e6fdda7e39b01b 416 Pfam PF00999 Sodium/hydrogen exchanger family 19 402 9.1E-52 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Amir_3175 5b118f0e1ad86f84c6e6fdda7e39b01b 416 Gene3D G3DSA:1.20.1530.20 11 411 2.7E-90 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Amir_2176 f063db8809ad6c85d3eb53af472d2a12 125 SUPERFAMILY SSF46955 2 117 1.36E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_2176 f063db8809ad6c85d3eb53af472d2a12 125 SMART SM00422 1 69 2.6E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_2176 f063db8809ad6c85d3eb53af472d2a12 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 6.5E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_2176 f063db8809ad6c85d3eb53af472d2a12 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 6.5E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_2176 f063db8809ad6c85d3eb53af472d2a12 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 6.5E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_2176 f063db8809ad6c85d3eb53af472d2a12 125 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_2176 f063db8809ad6c85d3eb53af472d2a12 125 Gene3D G3DSA:1.10.1660.10 1 120 1.9E-28 T 14-10-2018 Amir_2176 f063db8809ad6c85d3eb53af472d2a12 125 Pfam PF13411 MerR HTH family regulatory protein 2 67 9.1E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_0616 5f5bf9ded6ea0af5823f8c5040cbcc60 432 Pfam PF01547 Bacterial extracellular solute-binding protein 62 345 2.7E-24 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_0616 5f5bf9ded6ea0af5823f8c5040cbcc60 432 Gene3D G3DSA:3.40.190.10 159 412 4.0E-130 T 14-10-2018 Amir_0616 5f5bf9ded6ea0af5823f8c5040cbcc60 432 Gene3D G3DSA:3.40.190.10 63 374 4.0E-130 T 14-10-2018 Amir_0616 5f5bf9ded6ea0af5823f8c5040cbcc60 432 SUPERFAMILY SSF53850 35 430 4.61E-55 T 14-10-2018 Amir_7083 e81b4de7665bdf1d2695f6183af1907f 502 SUPERFAMILY SSF56112 20 264 1.0E-6 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_7083 e81b4de7665bdf1d2695f6183af1907f 502 Gene3D G3DSA:1.10.510.10 116 266 4.4E-36 T 14-10-2018 Amir_7083 e81b4de7665bdf1d2695f6183af1907f 502 Gene3D G3DSA:3.30.200.20 11 115 9.7E-24 T 14-10-2018 Amir_3024 9e41b22a15786e5608a4a20f8f1e4c2d 261 Gene3D G3DSA:3.30.540.10 2 134 2.5E-35 T 14-10-2018 Amir_3024 9e41b22a15786e5608a4a20f8f1e4c2d 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 77 93 7.5E-41 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_3024 9e41b22a15786e5608a4a20f8f1e4c2d 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 7.5E-41 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_3024 9e41b22a15786e5608a4a20f8f1e4c2d 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 7.5E-41 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_3024 9e41b22a15786e5608a4a20f8f1e4c2d 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 57 73 7.5E-41 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_3024 9e41b22a15786e5608a4a20f8f1e4c2d 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 35 55 7.5E-41 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_3024 9e41b22a15786e5608a4a20f8f1e4c2d 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 126 149 7.5E-41 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_3024 9e41b22a15786e5608a4a20f8f1e4c2d 261 Pfam PF00459 Inositol monophosphatase family 8 239 1.2E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_3024 9e41b22a15786e5608a4a20f8f1e4c2d 261 SUPERFAMILY SSF56655 5 258 1.83E-64 T 14-10-2018 Amir_3024 9e41b22a15786e5608a4a20f8f1e4c2d 261 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Amir_3024 9e41b22a15786e5608a4a20f8f1e4c2d 261 Gene3D G3DSA:3.40.190.80 137 260 1.1E-28 T 14-10-2018 Amir_3024 9e41b22a15786e5608a4a20f8f1e4c2d 261 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 77 90 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Amir_0976 ef1dca8f1b2a31a5e5e2bfa4a55f1073 775 SUPERFAMILY SSF52540 115 380 3.43E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0976 ef1dca8f1b2a31a5e5e2bfa4a55f1073 775 SMART SM00028 561 594 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0976 ef1dca8f1b2a31a5e5e2bfa4a55f1073 775 SMART SM00028 601 634 0.0075 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0976 ef1dca8f1b2a31a5e5e2bfa4a55f1073 775 SMART SM00028 681 714 1.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0976 ef1dca8f1b2a31a5e5e2bfa4a55f1073 775 SMART SM00028 721 754 9.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0976 ef1dca8f1b2a31a5e5e2bfa4a55f1073 775 SMART SM00028 641 674 0.016 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0976 ef1dca8f1b2a31a5e5e2bfa4a55f1073 775 Gene3D G3DSA:3.40.50.300 115 272 7.1E-23 T 14-10-2018 Amir_0976 ef1dca8f1b2a31a5e5e2bfa4a55f1073 775 PRINTS PR00364 Disease resistance protein signature 151 166 3.6E-7 T 14-10-2018 Amir_0976 ef1dca8f1b2a31a5e5e2bfa4a55f1073 775 PRINTS PR00364 Disease resistance protein signature 318 332 3.6E-7 T 14-10-2018 Amir_0976 ef1dca8f1b2a31a5e5e2bfa4a55f1073 775 PRINTS PR00364 Disease resistance protein signature 230 244 3.6E-7 T 14-10-2018 Amir_0976 ef1dca8f1b2a31a5e5e2bfa4a55f1073 775 Pfam PF13424 Tetratricopeptide repeat 642 711 3.4E-13 T 14-10-2018 Amir_0976 ef1dca8f1b2a31a5e5e2bfa4a55f1073 775 Pfam PF13424 Tetratricopeptide repeat 561 633 2.0E-12 T 14-10-2018 Amir_0976 ef1dca8f1b2a31a5e5e2bfa4a55f1073 775 Gene3D G3DSA:1.25.40.10 513 771 1.5E-49 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0976 ef1dca8f1b2a31a5e5e2bfa4a55f1073 775 SUPERFAMILY SSF48452 559 752 2.28E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_0976 ef1dca8f1b2a31a5e5e2bfa4a55f1073 775 Pfam PF13176 Tetratricopeptide repeat 724 753 0.019 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amir_0976 ef1dca8f1b2a31a5e5e2bfa4a55f1073 775 SMART SM00530 25 87 0.0032 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_1364 c4518684ba671fc698eb78061a804449 124 Pfam PF01521 Iron-sulphur cluster biosynthesis 20 121 1.2E-18 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Amir_1364 c4518684ba671fc698eb78061a804449 124 SUPERFAMILY SSF89360 20 113 6.67E-27 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Amir_1364 c4518684ba671fc698eb78061a804449 124 Gene3D G3DSA:2.60.300.12 19 124 1.8E-28 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Amir_1364 c4518684ba671fc698eb78061a804449 124 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 20 124 7.0E-35 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Amir_1364 c4518684ba671fc698eb78061a804449 124 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 106 123 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Amir_3443 ad73a579c6605719a38a37b3378690e9 525 Gene3D G3DSA:3.90.79.10 386 521 1.4E-23 T 14-10-2018 Amir_3443 ad73a579c6605719a38a37b3378690e9 525 SUPERFAMILY SSF103473 8 389 3.66E-27 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_3443 ad73a579c6605719a38a37b3378690e9 525 ProSitePatterns PS00893 Nudix box signature. 425 446 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_3443 ad73a579c6605719a38a37b3378690e9 525 Gene3D G3DSA:1.20.1250.20 204 384 6.9E-18 T 14-10-2018 Amir_3443 ad73a579c6605719a38a37b3378690e9 525 Pfam PF00293 NUDIX domain 391 472 1.3E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_3443 ad73a579c6605719a38a37b3378690e9 525 Pfam PF07690 Major Facilitator Superfamily 20 326 5.0E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_3443 ad73a579c6605719a38a37b3378690e9 525 PRINTS PR00502 NUDIX hydrolase family signature 420 434 9.4E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_3443 ad73a579c6605719a38a37b3378690e9 525 PRINTS PR00502 NUDIX hydrolase family signature 434 449 9.4E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_3443 ad73a579c6605719a38a37b3378690e9 525 SUPERFAMILY SSF55811 379 517 8.94E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_3443 ad73a579c6605719a38a37b3378690e9 525 Gene3D G3DSA:1.20.1250.20 14 189 3.4E-10 T 14-10-2018 Amir_3272 519d7e895e8c5e5cbefd7fb676760335 209 SUPERFAMILY SSF51430 15 194 1.01E-8 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3272 519d7e895e8c5e5cbefd7fb676760335 209 Gene3D G3DSA:3.20.20.100 12 181 2.9E-5 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3969 2b71bbbb698e24ae2cd1f1a6ec3b6740 142 Gene3D G3DSA:1.10.260.40 28 101 1.1E-6 T 14-10-2018 Amir_3969 2b71bbbb698e24ae2cd1f1a6ec3b6740 142 Pfam PF13560 Helix-turn-helix domain 37 106 7.0E-13 T 14-10-2018 Amir_1994 d3d5cad6e0b999e620917cc72a89ff88 306 Pfam PF03631 Virulence factor BrkB 29 282 1.0E-62 T 14-10-2018 IPR017039 Virulence factor BrkB Amir_1994 d3d5cad6e0b999e620917cc72a89ff88 306 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 21 280 1.3E-27 T 14-10-2018 IPR017039 Virulence factor BrkB Amir_1994 d3d5cad6e0b999e620917cc72a89ff88 306 PIRSF PIRSF035875 2 304 2.5E-80 T 14-10-2018 IPR017039 Virulence factor BrkB Amir_5145 5410d28b004292578acd618e7b18b505 565 Gene3D G3DSA:3.20.20.450 3 233 2.6E-42 T 14-10-2018 IPR035919 EAL domain superfamily Amir_5145 5410d28b004292578acd618e7b18b505 565 SUPERFAMILY SSF55073 400 480 3.69E-12 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_5145 5410d28b004292578acd618e7b18b505 565 Gene3D G3DSA:3.30.70.270 387 485 1.8E-15 T 14-10-2018 Amir_5145 5410d28b004292578acd618e7b18b505 565 Pfam PF00563 EAL domain 7 223 1.4E-38 T 14-10-2018 IPR001633 EAL domain Amir_5145 5410d28b004292578acd618e7b18b505 565 SMART SM00267 384 546 1.2E-5 T 14-10-2018 IPR000160 GGDEF domain Amir_5145 5410d28b004292578acd618e7b18b505 565 SUPERFAMILY SSF141868 6 232 8.24E-43 T 14-10-2018 IPR035919 EAL domain superfamily Amir_5145 5410d28b004292578acd618e7b18b505 565 SMART SM00052 6 229 5.5E-13 T 14-10-2018 IPR001633 EAL domain Amir_5145 5410d28b004292578acd618e7b18b505 565 Gene3D G3DSA:3.10.580.10 261 386 3.0E-6 T 14-10-2018 Amir_5145 5410d28b004292578acd618e7b18b505 565 Pfam PF00990 Diguanylate cyclase, GGDEF domain 398 479 8.7E-9 T 14-10-2018 IPR000160 GGDEF domain Amir_5145 5410d28b004292578acd618e7b18b505 565 SUPERFAMILY SSF54631 267 403 5.16E-7 T 14-10-2018 Amir_5145 5410d28b004292578acd618e7b18b505 565 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 395 479 3.0E-10 T 14-10-2018 IPR000160 GGDEF domain Amir_0226 776f682410f733d7d1cc1268517dcf0b 350 Gene3D G3DSA:3.40.50.1820 39 348 1.3E-90 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0226 776f682410f733d7d1cc1268517dcf0b 350 Pfam PF07859 alpha/beta hydrolase fold 116 321 4.7E-73 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 Amir_0226 776f682410f733d7d1cc1268517dcf0b 350 SUPERFAMILY SSF53474 80 342 5.31E-72 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0226 776f682410f733d7d1cc1268517dcf0b 350 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 116 132 - T 14-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 Amir_0954 69312f8cb8f13a0fd897ef6fbc6d2983 435 SUPERFAMILY SSF103473 15 396 6.41E-75 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_0954 69312f8cb8f13a0fd897ef6fbc6d2983 435 ProSitePatterns PS00216 Sugar transport proteins signature 1. 273 289 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Amir_0954 69312f8cb8f13a0fd897ef6fbc6d2983 435 Gene3D G3DSA:1.20.1250.20 15 194 2.8E-31 T 14-10-2018 Amir_0954 69312f8cb8f13a0fd897ef6fbc6d2983 435 Pfam PF07690 Major Facilitator Superfamily 21 226 4.2E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_0954 69312f8cb8f13a0fd897ef6fbc6d2983 435 Gene3D G3DSA:1.20.1250.20 233 417 1.5E-33 T 14-10-2018 Amir_0954 69312f8cb8f13a0fd897ef6fbc6d2983 435 Pfam PF00083 Sugar (and other) transporter 255 401 5.7E-11 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Amir_0954 69312f8cb8f13a0fd897ef6fbc6d2983 435 PRINTS PR01035 Tetracycline resistance protein signature 282 303 1.8E-8 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_0954 69312f8cb8f13a0fd897ef6fbc6d2983 435 PRINTS PR01035 Tetracycline resistance protein signature 141 163 1.8E-8 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_0954 69312f8cb8f13a0fd897ef6fbc6d2983 435 PRINTS PR01035 Tetracycline resistance protein signature 344 367 1.8E-8 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_0954 69312f8cb8f13a0fd897ef6fbc6d2983 435 PRINTS PR01035 Tetracycline resistance protein signature 26 42 1.8E-8 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Amir_0318 da1cfdbdc878b85fb58a6e6d1e5b490b 150 Pfam PF11377 Protein of unknown function (DUF3180) 9 144 1.1E-40 T 14-10-2018 IPR021517 Protein of unknown function DUF3180 Amir_5173 b184172b881d7d5e344caf463983dabd 139 Pfam PF04341 Protein of unknown function, DUF485 45 132 3.0E-29 T 14-10-2018 IPR007436 Protein of unknown function DUF485 Amir_4709 90baa14dbbb79d536759dd27b6ac25ed 121 SUPERFAMILY SSF46785 13 70 7.31E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4709 90baa14dbbb79d536759dd27b6ac25ed 121 Gene3D G3DSA:1.10.10.10 6 86 1.3E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2944 4179f78548e7c797bb7c1ba39014d74e 236 Gene3D G3DSA:3.10.350.10 169 233 7.9E-8 T 14-10-2018 IPR036779 LysM domain superfamily Amir_2944 4179f78548e7c797bb7c1ba39014d74e 236 Pfam PF01476 LysM domain 183 229 1.3E-6 T 14-10-2018 IPR018392 LysM domain Amir_0478 538f18a46f1dd352bdbe6b0739a825f6 321 Gene3D G3DSA:1.10.357.10 129 308 3.7E-18 T 14-10-2018 Amir_0478 538f18a46f1dd352bdbe6b0739a825f6 321 SUPERFAMILY SSF46689 131 201 2.44E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0478 538f18a46f1dd352bdbe6b0739a825f6 321 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 132 145 4.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0478 538f18a46f1dd352bdbe6b0739a825f6 321 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 153 176 4.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0478 538f18a46f1dd352bdbe6b0739a825f6 321 Pfam PF00440 Bacterial regulatory proteins, tetR family 132 178 5.1E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1366 2dfd7391e0509e53c007ba7b810bde77 642 SUPERFAMILY SSF56235 2 230 2.23E-55 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_1366 2dfd7391e0509e53c007ba7b810bde77 642 PIRSF PIRSF001589 1 636 2.1E-174 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Amir_1366 2dfd7391e0509e53c007ba7b810bde77 642 Pfam PF00733 Asparagine synthase 252 621 3.2E-103 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Amir_1366 2dfd7391e0509e53c007ba7b810bde77 642 Pfam PF13537 Glutamine amidotransferase domain 50 172 2.4E-38 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Amir_1366 2dfd7391e0509e53c007ba7b810bde77 642 Gene3D G3DSA:3.60.20.10 3 194 4.2E-56 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_1366 2dfd7391e0509e53c007ba7b810bde77 642 SUPERFAMILY SSF52402 245 617 1.72E-85 T 14-10-2018 Amir_1366 2dfd7391e0509e53c007ba7b810bde77 642 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 559 1.5E-141 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Amir_2857 426a6a4c4f4f84963ac2be4de098b834 326 Pfam PF08279 HTH domain 11 65 3.0E-13 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Amir_2857 426a6a4c4f4f84963ac2be4de098b834 326 Gene3D G3DSA:1.10.10.10 2 69 3.2E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2857 426a6a4c4f4f84963ac2be4de098b834 326 SUPERFAMILY SSF46785 8 71 1.08E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2857 426a6a4c4f4f84963ac2be4de098b834 326 Pfam PF13280 WYL domain 147 310 1.3E-22 T 14-10-2018 IPR026881 WYL domain Amir_5727 a6ab878509548a615dc0933b33d1880b 145 Pfam PF05239 PRC-barrel domain 8 73 1.3E-10 T 14-10-2018 IPR027275 PRC-barrel domain Amir_5727 a6ab878509548a615dc0933b33d1880b 145 Gene3D G3DSA:3.90.50.10 2 112 1.0E-7 T 14-10-2018 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal GO:0019684|GO:0030077|GO:0045156 Amir_5727 a6ab878509548a615dc0933b33d1880b 145 SUPERFAMILY SSF50346 6 114 3.3E-18 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Amir_0635 54cf2dd2a75205b18728b29282282165 721 Pfam PF00069 Protein kinase domain 443 687 6.1E-46 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_0635 54cf2dd2a75205b18728b29282282165 721 SUPERFAMILY SSF56112 430 688 2.56E-64 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_0635 54cf2dd2a75205b18728b29282282165 721 SMART SM00220 442 695 3.1E-47 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_0635 54cf2dd2a75205b18728b29282282165 721 Gene3D G3DSA:3.30.200.20 418 520 4.6E-25 T 14-10-2018 Amir_0635 54cf2dd2a75205b18728b29282282165 721 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 448 471 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_0635 54cf2dd2a75205b18728b29282282165 721 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 558 570 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_0635 54cf2dd2a75205b18728b29282282165 721 Gene3D G3DSA:1.10.510.10 521 700 4.5E-36 T 14-10-2018 Amir_4332 471c6f0111d8ff062a9be20899d93b89 144 SUPERFAMILY SSF52172 8 132 5.27E-29 T 14-10-2018 IPR011006 CheY-like superfamily Amir_4332 471c6f0111d8ff062a9be20899d93b89 144 Pfam PF00072 Response regulator receiver domain 11 127 1.8E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4332 471c6f0111d8ff062a9be20899d93b89 144 Gene3D G3DSA:3.40.50.2300 2 141 1.3E-30 T 14-10-2018 Amir_4332 471c6f0111d8ff062a9be20899d93b89 144 SMART SM00448 9 129 6.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_2062 37467a2f7a4f6f6494773da8fe58b892 98 Gene3D G3DSA:2.60.40.180 1 98 1.1E-28 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Amir_2062 37467a2f7a4f6f6494773da8fe58b892 98 ProSitePatterns PS00768 Transthyretin signature 1. 6 21 - T 14-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Amir_2062 37467a2f7a4f6f6494773da8fe58b892 98 SUPERFAMILY SSF49472 2 98 3.14E-30 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Amir_2062 37467a2f7a4f6f6494773da8fe58b892 98 Pfam PF00576 HIUase/Transthyretin family 3 97 3.7E-25 T 14-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Amir_2062 37467a2f7a4f6f6494773da8fe58b892 98 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 98 2.9E-26 T 14-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Amir_2330 e07ec154e8e9cb0d04393622ee2dfb02 90 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.3E-26 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Amir_2330 e07ec154e8e9cb0d04393622ee2dfb02 90 PIRSF PIRSF004669 1 89 2.0E-31 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Amir_2330 e07ec154e8e9cb0d04393622ee2dfb02 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 8.7E-19 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Amir_2330 e07ec154e8e9cb0d04393622ee2dfb02 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 8.7E-19 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Amir_2330 e07ec154e8e9cb0d04393622ee2dfb02 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 8.7E-19 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Amir_2330 e07ec154e8e9cb0d04393622ee2dfb02 90 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 6.3E-27 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 Amir_3077 20f593463755f1080b867f55e368cef0 521 Gene3D G3DSA:3.40.309.10 285 483 1.0E-149 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_3077 20f593463755f1080b867f55e368cef0 521 SUPERFAMILY SSF53720 38 516 6.15E-137 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_3077 20f593463755f1080b867f55e368cef0 521 Gene3D G3DSA:3.40.605.10 44 506 1.0E-149 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_3077 20f593463755f1080b867f55e368cef0 521 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 309 320 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Amir_3077 20f593463755f1080b867f55e368cef0 521 Pfam PF00171 Aldehyde dehydrogenase family 52 512 2.3E-139 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_0211 d7734a68afe583dc1fd118c655bfb1ed 712 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 229 243 4.5E-11 T 14-10-2018 Amir_0211 d7734a68afe583dc1fd118c655bfb1ed 712 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 323 347 4.5E-11 T 14-10-2018 Amir_0211 d7734a68afe583dc1fd118c655bfb1ed 712 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 295 307 4.5E-11 T 14-10-2018 Amir_0211 d7734a68afe583dc1fd118c655bfb1ed 712 SUPERFAMILY SSF116734 525 702 5.56E-19 T 14-10-2018 Amir_0211 d7734a68afe583dc1fd118c655bfb1ed 712 Gene3D G3DSA:3.40.50.150 198 459 8.5E-27 T 14-10-2018 Amir_0211 d7734a68afe583dc1fd118c655bfb1ed 712 SUPERFAMILY SSF53335 212 496 1.86E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_0211 d7734a68afe583dc1fd118c655bfb1ed 712 Pfam PF02384 N-6 DNA Methylase 212 470 1.2E-22 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Amir_0211 d7734a68afe583dc1fd118c655bfb1ed 712 Gene3D G3DSA:3.90.220.20 523 706 2.6E-20 T 14-10-2018 Amir_0196 f7209b6c00ae7b4fa1930203feb3eec4 135 Gene3D G3DSA:3.30.1330.40 3 135 8.2E-30 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_0196 f7209b6c00ae7b4fa1930203feb3eec4 135 SUPERFAMILY SSF55298 2 134 5.81E-27 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_0196 f7209b6c00ae7b4fa1930203feb3eec4 135 Pfam PF01042 Endoribonuclease L-PSP 17 134 5.5E-18 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Amir_1084 5f803092510b7553040ae8a7f8ea4736 266 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 16 204 4.0E-27 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_1084 5f803092510b7553040ae8a7f8ea4736 266 Pfam PF02096 60Kd inner membrane protein 17 204 7.8E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Amir_4628 2d70668ee12161bbe439b47a40865f51 241 Pfam PF13649 Methyltransferase domain 42 137 1.0E-18 T 14-10-2018 Amir_4628 2d70668ee12161bbe439b47a40865f51 241 Gene3D G3DSA:3.40.50.150 21 238 1.5E-37 T 14-10-2018 Amir_4628 2d70668ee12161bbe439b47a40865f51 241 SUPERFAMILY SSF53335 20 217 2.89E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_4007 b42596e89d64652ddf8473d1ae70e5c1 269 SUPERFAMILY SSF51658 4 257 6.55E-53 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Amir_4007 b42596e89d64652ddf8473d1ae70e5c1 269 Pfam PF01261 Xylose isomerase-like TIM barrel 21 211 1.6E-28 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Amir_4007 b42596e89d64652ddf8473d1ae70e5c1 269 Gene3D G3DSA:3.20.20.150 1 265 3.2E-61 T 14-10-2018 Amir_7089 4262a60548615320a6f807d43f451dbf 210 Gene3D G3DSA:3.40.630.30 24 208 4.3E-8 T 14-10-2018 Amir_7089 4262a60548615320a6f807d43f451dbf 210 SUPERFAMILY SSF55729 39 168 2.88E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_7089 4262a60548615320a6f807d43f451dbf 210 Pfam PF08445 FR47-like protein 98 134 2.3E-5 T 14-10-2018 IPR013653 FR47-like GO:0016747 Amir_6489 67f5b5495e9f1eb6874af611669080fb 63 Pfam PF08940 Domain of unknown function (DUF1918) 1 57 1.3E-28 T 14-10-2018 IPR015035 Domain of unknown function DUF1918 Amir_6489 67f5b5495e9f1eb6874af611669080fb 63 SUPERFAMILY SSF50118 1 61 2.48E-23 T 14-10-2018 Amir_6489 67f5b5495e9f1eb6874af611669080fb 63 Gene3D G3DSA:2.30.30.440 1 62 3.7E-25 T 14-10-2018 Amir_2266 51020422c24782362fc5102a01fcd878 517 SUPERFAMILY SSF53383 52 511 1.25E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_2266 51020422c24782362fc5102a01fcd878 517 Gene3D G3DSA:3.40.640.10 143 386 8.7E-118 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_2266 51020422c24782362fc5102a01fcd878 517 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 114 443 3.1E-44 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Amir_2266 51020422c24782362fc5102a01fcd878 517 Gene3D G3DSA:3.90.1150.170 83 500 8.7E-118 T 14-10-2018 Amir_2266 51020422c24782362fc5102a01fcd878 517 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 156 175 1.0E-8 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Amir_2266 51020422c24782362fc5102a01fcd878 517 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 381 396 1.0E-8 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Amir_2266 51020422c24782362fc5102a01fcd878 517 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 424 443 1.0E-8 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Amir_2266 51020422c24782362fc5102a01fcd878 517 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 116 135 1.0E-8 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Amir_0917 187668f56d9b6b27863fc7f903b0419c 280 SUPERFAMILY SSF46785 4 78 8.24E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0917 187668f56d9b6b27863fc7f903b0419c 280 SMART SM00345 15 74 1.1E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_0917 187668f56d9b6b27863fc7f903b0419c 280 Gene3D G3DSA:1.10.10.10 9 118 2.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0917 187668f56d9b6b27863fc7f903b0419c 280 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 8.8E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_0917 187668f56d9b6b27863fc7f903b0419c 280 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 8.8E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_0917 187668f56d9b6b27863fc7f903b0419c 280 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 8.2E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_0025 d6bd46c72581e7f58cab9b6048a93440 474 SMART SM00331 11 235 7.0E-38 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_0025 d6bd46c72581e7f58cab9b6048a93440 474 Gene3D G3DSA:3.60.40.10 2 236 6.9E-66 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_0025 d6bd46c72581e7f58cab9b6048a93440 474 SUPERFAMILY SSF81606 4 234 2.62E-63 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_0025 d6bd46c72581e7f58cab9b6048a93440 474 SMART SM00332 2 233 3.8E-25 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_0025 d6bd46c72581e7f58cab9b6048a93440 474 Pfam PF13672 Protein phosphatase 2C 17 199 2.2E-12 T 14-10-2018 Amir_5440 f5199e2be70180501e192c932e2bc836 300 Hamap MF_00361 NAD kinase [nadK]. 4 289 29.731 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Amir_5440 f5199e2be70180501e192c932e2bc836 300 Pfam PF01513 ATP-NAD kinase 55 273 3.1E-60 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Amir_5440 f5199e2be70180501e192c932e2bc836 300 Gene3D G3DSA:2.60.200.30 129 266 8.5E-90 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Amir_5440 f5199e2be70180501e192c932e2bc836 300 Gene3D G3DSA:3.40.50.10330 58 287 8.5E-90 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Amir_5440 f5199e2be70180501e192c932e2bc836 300 SUPERFAMILY SSF111331 5 295 3.01E-75 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Amir_4422 6abea4ce4bc821d821dbc769139f962d 327 Gene3D G3DSA:1.10.10.60 196 303 6.1E-25 T 14-10-2018 Amir_4422 6abea4ce4bc821d821dbc769139f962d 327 Pfam PF12852 Cupin 6 182 1.1E-25 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain Amir_4422 6abea4ce4bc821d821dbc769139f962d 327 SUPERFAMILY SSF46689 198 249 2.19E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4422 6abea4ce4bc821d821dbc769139f962d 327 Gene3D G3DSA:2.60.120.10 14 104 1.2E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_4422 6abea4ce4bc821d821dbc769139f962d 327 Pfam PF12833 Helix-turn-helix domain 221 298 3.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4422 6abea4ce4bc821d821dbc769139f962d 327 SMART SM00342 215 298 5.5E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_4422 6abea4ce4bc821d821dbc769139f962d 327 SUPERFAMILY SSF51182 23 78 6.52E-6 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_4422 6abea4ce4bc821d821dbc769139f962d 327 SUPERFAMILY SSF46689 251 300 1.03E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4422 6abea4ce4bc821d821dbc769139f962d 327 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 294 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amir_0943 ab10884a68905be871912fe58d89314f 166 SUPERFAMILY SSF46785 8 162 4.66E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0943 ab10884a68905be871912fe58d89314f 166 Pfam PF03551 Transcriptional regulator PadR-like family 11 81 3.9E-7 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal Amir_0943 ab10884a68905be871912fe58d89314f 166 Gene3D G3DSA:1.10.10.10 6 88 4.0E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1375 a86fbf9d25c0aa809c968029fa2815a1 374 Gene3D G3DSA:2.102.10.10 207 371 2.9E-35 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Amir_1375 a86fbf9d25c0aa809c968029fa2815a1 374 Pfam PF00355 Rieske [2Fe-2S] domain 259 346 1.4E-11 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Amir_1375 a86fbf9d25c0aa809c968029fa2815a1 374 PRINTS PR00162 Rieske 2Fe-2S subunit signature 294 305 3.5E-5 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Amir_1375 a86fbf9d25c0aa809c968029fa2815a1 374 PRINTS PR00162 Rieske 2Fe-2S subunit signature 330 342 3.5E-5 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Amir_1375 a86fbf9d25c0aa809c968029fa2815a1 374 PRINTS PR00162 Rieske 2Fe-2S subunit signature 316 328 3.5E-5 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Amir_1375 a86fbf9d25c0aa809c968029fa2815a1 374 SUPERFAMILY SSF50022 288 372 6.02E-28 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Amir_6133 34ec53877e2a526e872e5742780905c7 190 Pfam PF01923 Cobalamin adenosyltransferase 8 175 3.7E-54 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Amir_6133 34ec53877e2a526e872e5742780905c7 190 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 179 5.9E-48 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Amir_6133 34ec53877e2a526e872e5742780905c7 190 SUPERFAMILY SSF89028 6 184 1.53E-54 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Amir_6133 34ec53877e2a526e872e5742780905c7 190 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 14 184 4.0E-56 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Amir_6133 34ec53877e2a526e872e5742780905c7 190 Gene3D G3DSA:1.20.1200.10 29 190 1.0E-56 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Amir_3985 7dc6a71a7f67c7436716040f338ae8d0 208 SUPERFAMILY SSF48371 57 120 1.19E-5 T 14-10-2018 IPR016024 Armadillo-type fold Amir_2074 b56ad30b0717a8955775ffab2af1f6eb 222 SUPERFAMILY SSF55797 33 157 8.63E-24 T 14-10-2018 IPR035940 CAP superfamily Amir_2074 b56ad30b0717a8955775ffab2af1f6eb 222 Gene3D G3DSA:3.40.33.10 17 157 5.8E-51 T 14-10-2018 IPR035940 CAP superfamily Amir_2074 b56ad30b0717a8955775ffab2af1f6eb 222 Pfam PF00188 Cysteine-rich secretory protein family 41 156 2.5E-20 T 14-10-2018 IPR014044 CAP domain Amir_3789 05beefa63099c807b3f39e4cb6e637fc 285 Gene3D G3DSA:2.130.10.10 50 285 2.8E-66 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_3789 05beefa63099c807b3f39e4cb6e637fc 285 SUPERFAMILY SSF101898 57 282 1.75E-31 T 14-10-2018 Amir_4358 4981e1eddb4d6d447cef746a4d86fb7a 447 SUPERFAMILY SSF51905 6 365 9.56E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4358 4981e1eddb4d6d447cef746a4d86fb7a 447 Pfam PF01494 FAD binding domain 8 342 7.3E-9 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_4358 4981e1eddb4d6d447cef746a4d86fb7a 447 Gene3D G3DSA:3.50.50.60 2 382 7.9E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_6625 566712abb17e4d10b521fd780b845379 97 Pfam PF13453 Transcription factor zinc-finger 2 40 4.4E-17 T 14-10-2018 IPR027392 Transcription factor zinc-finger Amir_3327 e608ea062aa503595a9e108a50947376 599 Pfam PF00733 Asparagine synthase 203 586 3.7E-40 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Amir_3327 e608ea062aa503595a9e108a50947376 599 SUPERFAMILY SSF52402 202 567 6.41E-31 T 14-10-2018 Amir_0238 159105730ceab0e96a3d683b10671a66 330 Pfam PF02374 Anion-transporting ATPase 15 173 1.2E-19 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Amir_0238 159105730ceab0e96a3d683b10671a66 330 SUPERFAMILY SSF52540 13 234 1.2E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1737 b6870abbb19bd6774dc388c921fdad1c 365 Gene3D G3DSA:3.40.640.10 1 237 1.2E-78 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_1737 b6870abbb19bd6774dc388c921fdad1c 365 Gene3D G3DSA:3.90.1150.10 238 365 2.5E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_1737 b6870abbb19bd6774dc388c921fdad1c 365 SUPERFAMILY SSF53383 15 364 2.69E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_1737 b6870abbb19bd6774dc388c921fdad1c 365 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 18 361 1.3E-110 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Amir_1737 b6870abbb19bd6774dc388c921fdad1c 365 PIRSF PIRSF000390 5 365 1.4E-96 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Amir_6709 9494e2a5377125139516480cf3dbada6 72 Gene3D G3DSA:1.10.1660.10 12 68 6.3E-12 T 14-10-2018 Amir_6709 9494e2a5377125139516480cf3dbada6 72 Pfam PF12728 Helix-turn-helix domain 12 59 4.8E-11 T 14-10-2018 Amir_6709 9494e2a5377125139516480cf3dbada6 72 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 12 61 5.5E-12 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Amir_6709 9494e2a5377125139516480cf3dbada6 72 SUPERFAMILY SSF46955 11 66 1.69E-11 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_3288 23b410fec7aa82fcb890f19b75728438 374 SUPERFAMILY SSF55347 128 325 3.92E-19 T 14-10-2018 Amir_3288 23b410fec7aa82fcb890f19b75728438 374 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 113 1.8E-18 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amir_3288 23b410fec7aa82fcb890f19b75728438 374 Gene3D G3DSA:3.40.50.720 1 118 2.9E-25 T 14-10-2018 Amir_3288 23b410fec7aa82fcb890f19b75728438 374 SUPERFAMILY SSF51735 1 149 3.55E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3288 23b410fec7aa82fcb890f19b75728438 374 Gene3D G3DSA:3.30.360.10 121 359 8.6E-20 T 14-10-2018 Amir_6175 3edf3d369e54ecbf6d0e4d119ec82ec6 344 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 71 303 1.7E-39 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Amir_6175 3edf3d369e54ecbf6d0e4d119ec82ec6 344 Gene3D G3DSA:1.10.40.50 248 318 1.2E-18 T 14-10-2018 Amir_6175 3edf3d369e54ecbf6d0e4d119ec82ec6 344 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 24 311 30.104 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Amir_6175 3edf3d369e54ecbf6d0e4d119ec82ec6 344 Gene3D G3DSA:3.40.50.300 79 247 4.4E-44 T 14-10-2018 Amir_6175 3edf3d369e54ecbf6d0e4d119ec82ec6 344 Pfam PF03193 RsgA GTPase 72 247 2.9E-41 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 Amir_6175 3edf3d369e54ecbf6d0e4d119ec82ec6 344 SMART SM00382 179 307 1.7E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6175 3edf3d369e54ecbf6d0e4d119ec82ec6 344 SUPERFAMILY SSF52540 88 309 1.27E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1342 39195dcc1a96cb84b27dae67696ddb05 311 SUPERFAMILY SSF51679 9 310 2.49E-68 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_1342 39195dcc1a96cb84b27dae67696ddb05 311 Gene3D G3DSA:3.20.20.30 4 311 1.2E-69 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_1342 39195dcc1a96cb84b27dae67696ddb05 311 Pfam PF00296 Luciferase-like monooxygenase 8 250 7.8E-47 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_1342 39195dcc1a96cb84b27dae67696ddb05 311 TIGRFAM TIGR03560 F420_Rv1855c: probable F420-dependent oxidoreductase, Rv1855c family 2 230 1.3E-91 T 14-10-2018 IPR019952 F420-dependent oxidoreductase-predicted, Rv1855c Amir_2561 52c0d8e667671e3efeea02095beb5f31 867 Pfam PF13208 TerB N-terminal domain 157 345 7.2E-45 T 14-10-2018 IPR025266 TerB, N-terminal Amir_2561 52c0d8e667671e3efeea02095beb5f31 867 Pfam PF15615 TerB-C domain 771 860 4.1E-10 T 14-10-2018 IPR028932 TerB-C domain Amir_0158 40857ff17b5089b73c41d15cdd18730b 475 SUPERFAMILY SSF56059 182 345 2.08E-15 T 14-10-2018 Amir_0158 40857ff17b5089b73c41d15cdd18730b 475 Gene3D G3DSA:3.30.470.20 182 346 5.6E-6 T 14-10-2018 Amir_6872 716df9a7b65d325e1cc1b9f2c9b30e38 362 Gene3D G3DSA:2.160.20.100 171 352 9.4E-9 T 14-10-2018 Amir_6872 716df9a7b65d325e1cc1b9f2c9b30e38 362 Pfam PF13576 Pentapeptide repeats (9 copies) 283 325 3.5E-11 T 14-10-2018 IPR001646 Pentapeptide repeat Amir_6062 fd954dafedc0c9a977d778cd8bef2161 310 SUPERFAMILY SSF53590 4 307 1.96E-83 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like Amir_6062 fd954dafedc0c9a977d778cd8bef2161 310 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 297 5.9E-80 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain Amir_6062 fd954dafedc0c9a977d778cd8bef2161 310 Gene3D G3DSA:3.90.245.10 1 309 4.8E-94 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like Amir_5381 186edd785ef67967bb923035880b1f6e 644 Pfam PF04865 Baseplate J-like protein 397 568 2.1E-11 T 14-10-2018 IPR006949 Baseplate protein J-like Amir_5381 186edd785ef67967bb923035880b1f6e 644 TIGRFAM TIGR02243 TIGR02243: putative baseplate assembly protein 7 609 8.8E-151 T 14-10-2018 IPR011749 Conserved hypothetical protein CHP02243 Amir_3940 10878912cfa57e6518d9564e2d9ba0dd 192 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 16 148 2.4E-24 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like Amir_3940 10878912cfa57e6518d9564e2d9ba0dd 192 SUPERFAMILY SSF55961 5 150 1.36E-37 T 14-10-2018 Amir_3940 10878912cfa57e6518d9564e2d9ba0dd 192 Gene3D G3DSA:3.30.530.20 1 150 8.0E-41 T 14-10-2018 IPR023393 START-like domain superfamily Amir_2618 581e3f6729807fc67d246448d5f2d0e7 265 SUPERFAMILY SSF52949 188 249 3.06E-5 T 14-10-2018 Amir_2618 581e3f6729807fc67d246448d5f2d0e7 265 Gene3D G3DSA:3.40.220.10 3 265 4.8E-82 T 14-10-2018 Amir_2618 581e3f6729807fc67d246448d5f2d0e7 265 PIRSF PIRSF014899 1 265 5.1E-96 T 14-10-2018 IPR012664 Conserved hypothetical protein CHP02452 Amir_2618 581e3f6729807fc67d246448d5f2d0e7 265 TIGRFAM TIGR02452 TIGR02452: TIGR02452 family protein 8 259 6.3E-79 T 14-10-2018 IPR012664 Conserved hypothetical protein CHP02452 Amir_2618 581e3f6729807fc67d246448d5f2d0e7 265 Pfam PF10021 Uncharacterized protein conserved in bacteria (DUF2263) 9 147 3.4E-46 T 14-10-2018 IPR019261 Domain of unknown function DUF2263 Amir_3835 161d98e5b41002b7a88ec7f0a2ea2727 406 Gene3D G3DSA:3.90.1150.10 264 392 7.5E-38 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_3835 161d98e5b41002b7a88ec7f0a2ea2727 406 SUPERFAMILY SSF53383 29 388 5.45E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_3835 161d98e5b41002b7a88ec7f0a2ea2727 406 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 30 385 1.2E-108 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Amir_3835 161d98e5b41002b7a88ec7f0a2ea2727 406 Gene3D G3DSA:3.40.640.10 10 261 1.5E-74 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_3835 161d98e5b41002b7a88ec7f0a2ea2727 406 PIRSF PIRSF000390 8 391 9.3E-99 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Amir_2661 f70993b11576fc9dd9907b2fea597c07 122 Pfam PF07883 Cupin domain 38 105 1.1E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Amir_2661 f70993b11576fc9dd9907b2fea597c07 122 Gene3D G3DSA:2.60.120.10 1 122 6.9E-33 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_2661 f70993b11576fc9dd9907b2fea597c07 122 SUPERFAMILY SSF51182 7 111 6.6E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_5207 87c378a16dda106e7bca6a4e4a303ef6 171 Pfam PF00355 Rieske [2Fe-2S] domain 80 155 8.7E-14 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Amir_5207 87c378a16dda106e7bca6a4e4a303ef6 171 Gene3D G3DSA:2.102.10.10 63 171 2.0E-22 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Amir_5207 87c378a16dda106e7bca6a4e4a303ef6 171 SUPERFAMILY SSF50022 74 168 3.01E-25 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Amir_0898 d8dc4d6efe0987d53f58f6f214c49130 276 SUPERFAMILY SSF56112 83 250 9.01E-9 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_0898 d8dc4d6efe0987d53f58f6f214c49130 276 Gene3D G3DSA:3.90.1200.10 123 258 2.0E-5 T 14-10-2018 Amir_1785 056802182de26035442db26d812f3e98 424 SUPERFAMILY SSF53850 35 422 7.76E-43 T 14-10-2018 Amir_1785 056802182de26035442db26d812f3e98 424 Pfam PF13416 Bacterial extracellular solute-binding protein 52 356 2.3E-31 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_1785 056802182de26035442db26d812f3e98 424 Gene3D G3DSA:3.40.190.10 54 352 2.8E-63 T 14-10-2018 Amir_1785 056802182de26035442db26d812f3e98 424 Gene3D G3DSA:3.40.190.10 148 406 2.8E-63 T 14-10-2018 Amir_2474 abfd676f621dc2868cd429ca252b98fc 132 Gene3D G3DSA:3.30.565.10 7 132 1.2E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2474 abfd676f621dc2868cd429ca252b98fc 132 SUPERFAMILY SSF55874 43 127 4.16E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2474 abfd676f621dc2868cd429ca252b98fc 132 Pfam PF13581 Histidine kinase-like ATPase domain 24 125 1.7E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2669 62f9f8eeb18b4d06b165f8ccc396ef4c 435 Pfam PF07690 Major Facilitator Superfamily 42 345 7.1E-26 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2669 62f9f8eeb18b4d06b165f8ccc396ef4c 435 Gene3D G3DSA:1.20.1250.20 26 405 3.2E-42 T 14-10-2018 Amir_2669 62f9f8eeb18b4d06b165f8ccc396ef4c 435 SUPERFAMILY SSF103473 29 405 1.02E-46 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_6446 8d73e64cbee38ab2390da286b0e5a116 356 SUPERFAMILY SSF51556 11 346 2.69E-73 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_6446 8d73e64cbee38ab2390da286b0e5a116 356 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 16 345 1.9E-80 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 Amir_6446 8d73e64cbee38ab2390da286b0e5a116 356 Hamap MF_00540 Adenosine deaminase [add]. 10 347 50.28 T 14-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 Amir_6446 8d73e64cbee38ab2390da286b0e5a116 356 Pfam PF00962 Adenosine/AMP deaminase 15 344 1.0E-83 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 Amir_6446 8d73e64cbee38ab2390da286b0e5a116 356 Gene3D G3DSA:3.20.20.140 11 352 4.8E-102 T 14-10-2018 Amir_0168 ee580ccbdcb6992794e250c89a0ee73b 318 SUPERFAMILY SSF51735 3 163 2.66E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0168 ee580ccbdcb6992794e250c89a0ee73b 318 Gene3D G3DSA:1.10.3660.10 168 273 7.4E-82 T 14-10-2018 Amir_0168 ee580ccbdcb6992794e250c89a0ee73b 318 SUPERFAMILY SSF48179 167 266 1.93E-21 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amir_0168 ee580ccbdcb6992794e250c89a0ee73b 318 Pfam PF02153 Prephenate dehydrogenase 40 241 7.1E-39 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 Amir_0168 ee580ccbdcb6992794e250c89a0ee73b 318 Gene3D G3DSA:3.40.50.720 5 167 7.4E-82 T 14-10-2018 Amir_3743 6d20e201012bb86c0fde32ce224e7783 125 SUPERFAMILY SSF52091 4 114 1.86E-16 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3743 6d20e201012bb86c0fde32ce224e7783 125 Gene3D G3DSA:3.30.750.24 1 119 3.2E-26 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3743 6d20e201012bb86c0fde32ce224e7783 125 Pfam PF01740 STAS domain 10 96 1.6E-5 T 14-10-2018 IPR002645 STAS domain Amir_0512 fde9e131ac33680d7131df7158bf3643 339 Pfam PF07730 Histidine kinase 157 220 5.6E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_0512 fde9e131ac33680d7131df7158bf3643 339 SUPERFAMILY SSF55874 250 325 7.6E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0512 fde9e131ac33680d7131df7158bf3643 339 Gene3D G3DSA:3.30.565.10 219 339 1.5E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1678 2b05a4bfed30b0b015bb3354af024ad0 553 PIRSF PIRSF002741 1 512 1.6E-64 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amir_1678 2b05a4bfed30b0b015bb3354af024ad0 553 Gene3D G3DSA:3.40.190.10 48 535 1.8E-137 T 14-10-2018 Amir_1678 2b05a4bfed30b0b015bb3354af024ad0 553 Gene3D G3DSA:3.10.105.10 273 514 1.8E-137 T 14-10-2018 Amir_1678 2b05a4bfed30b0b015bb3354af024ad0 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 446 6.0E-57 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Amir_1678 2b05a4bfed30b0b015bb3354af024ad0 553 Gene3D G3DSA:3.90.76.10 70 174 1.8E-137 T 14-10-2018 Amir_1678 2b05a4bfed30b0b015bb3354af024ad0 553 SUPERFAMILY SSF53850 33 529 9.78E-87 T 14-10-2018 Amir_3606 51c2cfa87f36b619cc9aad9d703d5a58 395 SUPERFAMILY SSF81606 194 391 1.26E-7 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3606 51c2cfa87f36b619cc9aad9d703d5a58 395 SMART SM00331 185 393 1.3E-23 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3606 51c2cfa87f36b619cc9aad9d703d5a58 395 Gene3D G3DSA:3.30.450.20 11 142 3.9E-8 T 14-10-2018 Amir_3606 51c2cfa87f36b619cc9aad9d703d5a58 395 Gene3D G3DSA:3.60.40.10 194 395 1.4E-44 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3606 51c2cfa87f36b619cc9aad9d703d5a58 395 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 209 393 6.4E-41 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_0784 ee07891860a148aa3e3163f3b9ecb8da 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 6.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0784 ee07891860a148aa3e3163f3b9ecb8da 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 6.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0784 ee07891860a148aa3e3163f3b9ecb8da 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 58 1.7E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0784 ee07891860a148aa3e3163f3b9ecb8da 197 SUPERFAMILY SSF48498 91 177 2.8E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_0784 ee07891860a148aa3e3163f3b9ecb8da 197 Pfam PF13305 WHG domain 95 170 1.4E-13 T 14-10-2018 IPR025996 WHG domain Amir_0784 ee07891860a148aa3e3163f3b9ecb8da 197 SUPERFAMILY SSF46689 9 79 2.29E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0784 ee07891860a148aa3e3163f3b9ecb8da 197 Gene3D G3DSA:1.10.357.10 9 191 2.0E-36 T 14-10-2018 Amir_5318 8fe3483668b58da916d3fd4b1f6d728a 329 Gene3D G3DSA:3.20.20.190 22 327 5.1E-101 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amir_5318 8fe3483668b58da916d3fd4b1f6d728a 329 Pfam PF16670 Phosphoinositide phospholipase C, Ca2+-dependent 96 208 2.3E-11 T 14-10-2018 IPR032075 Phosphoinositide phospholipase C, Ca2+-dependent Amir_5318 8fe3483668b58da916d3fd4b1f6d728a 329 SUPERFAMILY SSF51695 55 196 9.94E-5 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amir_2458 7e87af637046d9c48690ae5725cdfd1b 331 SUPERFAMILY SSF161098 107 317 1.07E-16 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2458 7e87af637046d9c48690ae5725cdfd1b 331 Gene3D G3DSA:1.10.3720.10 101 320 3.0E-20 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2458 7e87af637046d9c48690ae5725cdfd1b 331 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 130 329 1.1E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0077 d55e26812c419428d49e8dca8b112554 410 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 354 363 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_0077 d55e26812c419428d49e8dca8b112554 410 Pfam PF00067 Cytochrome P450 196 375 1.1E-20 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_0077 d55e26812c419428d49e8dca8b112554 410 PRINTS PR00359 B-class P450 signature 94 105 1.2E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_0077 d55e26812c419428d49e8dca8b112554 410 PRINTS PR00359 B-class P450 signature 161 176 1.2E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_0077 d55e26812c419428d49e8dca8b112554 410 PRINTS PR00359 B-class P450 signature 303 330 1.2E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_0077 d55e26812c419428d49e8dca8b112554 410 PRINTS PR00359 B-class P450 signature 352 361 1.2E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_0077 d55e26812c419428d49e8dca8b112554 410 PRINTS PR00359 B-class P450 signature 144 160 1.2E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_0077 d55e26812c419428d49e8dca8b112554 410 PRINTS PR00359 B-class P450 signature 286 297 1.2E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_0077 d55e26812c419428d49e8dca8b112554 410 PRINTS PR00359 B-class P450 signature 331 346 1.2E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_0077 d55e26812c419428d49e8dca8b112554 410 PRINTS PR00359 B-class P450 signature 204 226 1.2E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_0077 d55e26812c419428d49e8dca8b112554 410 PRINTS PR00359 B-class P450 signature 361 372 1.2E-50 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_0077 d55e26812c419428d49e8dca8b112554 410 Gene3D G3DSA:1.10.630.10 11 410 2.6E-122 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_0077 d55e26812c419428d49e8dca8b112554 410 SUPERFAMILY SSF48264 14 407 2.36E-87 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4143 35cfcf45cf516b3f3c100a1e1f9cbcb3 279 SMART SM00327 12 227 1.3E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_4143 35cfcf45cf516b3f3c100a1e1f9cbcb3 279 Gene3D G3DSA:3.40.50.410 8 211 2.2E-13 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_4143 35cfcf45cf516b3f3c100a1e1f9cbcb3 279 SUPERFAMILY SSF53300 13 187 3.96E-14 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_3612 b9f3218062229ede9d25ae7e4ccc4ec5 231 Pfam PF00005 ABC transporter 26 174 3.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3612 b9f3218062229ede9d25ae7e4ccc4ec5 231 SMART SM00382 35 223 1.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3612 b9f3218062229ede9d25ae7e4ccc4ec5 231 SUPERFAMILY SSF52540 6 228 4.28E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3612 b9f3218062229ede9d25ae7e4ccc4ec5 231 Gene3D G3DSA:3.40.50.300 4 231 1.5E-65 T 14-10-2018 Amir_3012 6da0a147d96d00294c0098ad9fa012fc 219 SUPERFAMILY SSF48498 85 186 8.15E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3012 6da0a147d96d00294c0098ad9fa012fc 219 SUPERFAMILY SSF46689 7 90 1.13E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3012 6da0a147d96d00294c0098ad9fa012fc 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 64 9.1E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3012 6da0a147d96d00294c0098ad9fa012fc 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 3.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3012 6da0a147d96d00294c0098ad9fa012fc 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 3.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3012 6da0a147d96d00294c0098ad9fa012fc 219 Gene3D G3DSA:1.10.357.10 2 192 1.3E-40 T 14-10-2018 Amir_6475 7f3789c5aac541ec0693e0c45323ac69 264 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 4 262 4.8E-74 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Amir_6475 7f3789c5aac541ec0693e0c45323ac69 264 SUPERFAMILY SSF56219 2 262 5.23E-71 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Amir_6475 7f3789c5aac541ec0693e0c45323ac69 264 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 5 261 1.9E-71 T 14-10-2018 Amir_6475 7f3789c5aac541ec0693e0c45323ac69 264 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 255 7.7E-23 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Amir_6475 7f3789c5aac541ec0693e0c45323ac69 264 Gene3D G3DSA:3.60.10.10 1 263 1.6E-74 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Amir_1777 ba735ecc7b161a9e1db44659be569789 130 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 9 94 1.9E-10 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amir_1777 ba735ecc7b161a9e1db44659be569789 130 SUPERFAMILY SSF50475 8 129 2.22E-25 T 14-10-2018 Amir_1777 ba735ecc7b161a9e1db44659be569789 130 Gene3D G3DSA:2.30.110.10 2 129 4.9E-38 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_4988 432decc7b51dd1b0e0a32f2e4f1f901b 189 Pfam PF14024 Protein of unknown function (DUF4240) 1 138 2.0E-36 T 14-10-2018 IPR025334 Domain of unknown function (DUF4240 Amir_1094 647ab9be58af65f1182ce7b7b0599c8e 215 Pfam PF07510 Protein of unknown function (DUF1524) 117 210 2.9E-11 T 14-10-2018 IPR011089 Domain of unknown function DUF1524 Amir_2027 1055a1abd717dc6475a18edf7089b0e6 436 Pfam PF05977 Transmembrane secretion effector 17 403 1.2E-46 T 14-10-2018 IPR010290 Transmembrane secretion effector Amir_2027 1055a1abd717dc6475a18edf7089b0e6 436 SUPERFAMILY SSF103473 23 413 7.19E-53 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2027 1055a1abd717dc6475a18edf7089b0e6 436 Gene3D G3DSA:1.20.1250.20 20 406 1.0E-47 T 14-10-2018 Amir_0721 a745bedd4834ae5f5197fb5566e9a100 323 Gene3D G3DSA:3.50.50.60 6 301 1.3E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0721 a745bedd4834ae5f5197fb5566e9a100 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 2.0E-24 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_0721 a745bedd4834ae5f5197fb5566e9a100 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 2.0E-24 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_0721 a745bedd4834ae5f5197fb5566e9a100 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 118 2.0E-24 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_0721 a745bedd4834ae5f5197fb5566e9a100 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 2.0E-24 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_0721 a745bedd4834ae5f5197fb5566e9a100 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 287 2.0E-24 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_0721 a745bedd4834ae5f5197fb5566e9a100 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 147 171 2.0E-24 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amir_0721 a745bedd4834ae5f5197fb5566e9a100 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.5E-18 T 14-10-2018 Amir_0721 a745bedd4834ae5f5197fb5566e9a100 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 2.5E-18 T 14-10-2018 Amir_0721 a745bedd4834ae5f5197fb5566e9a100 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 2.5E-18 T 14-10-2018 Amir_0721 a745bedd4834ae5f5197fb5566e9a100 323 Hamap MF_01685 Ferredoxin--NADP reductase. 4 322 37.966 T 14-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 Amir_0721 a745bedd4834ae5f5197fb5566e9a100 323 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 287 3.2E-32 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amir_0721 a745bedd4834ae5f5197fb5566e9a100 323 SUPERFAMILY SSF51905 1 305 2.82E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0721 a745bedd4834ae5f5197fb5566e9a100 323 Gene3D G3DSA:3.50.50.60 125 240 1.3E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2248 00af75bcce99f4c3d5a3fc6aa93a8877 294 SUPERFAMILY SSF55961 12 151 7.47E-16 T 14-10-2018 Amir_2248 00af75bcce99f4c3d5a3fc6aa93a8877 294 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 161 263 8.2E-10 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like Amir_2248 00af75bcce99f4c3d5a3fc6aa93a8877 294 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 111 1.0E-9 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like Amir_2248 00af75bcce99f4c3d5a3fc6aa93a8877 294 Gene3D G3DSA:3.30.530.20 3 141 1.8E-15 T 14-10-2018 IPR023393 START-like domain superfamily Amir_2248 00af75bcce99f4c3d5a3fc6aa93a8877 294 Gene3D G3DSA:3.30.530.20 142 277 5.5E-21 T 14-10-2018 IPR023393 START-like domain superfamily Amir_2248 00af75bcce99f4c3d5a3fc6aa93a8877 294 SUPERFAMILY SSF55961 147 279 2.32E-24 T 14-10-2018 Amir_5661 3564ac9f17eca067bf7f67895972c642 100 Pfam PF12823 Domain of unknown function (DUF3817) 5 90 1.5E-27 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane Amir_5661 3564ac9f17eca067bf7f67895972c642 100 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 8 90 8.6E-31 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane Amir_0365 da8d9a15d33cffc45dd1856624277f09 205 SUPERFAMILY SSF110087 152 193 3.4E-6 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily Amir_6281 d373c45ea284066e29e92e1a8044d04f 109 Gene3D G3DSA:2.10.109.10 1 103 2.4E-10 T 14-10-2018 Amir_6281 d373c45ea284066e29e92e1a8044d04f 109 SUPERFAMILY SSF51306 3 94 1.83E-16 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Amir_6281 d373c45ea284066e29e92e1a8044d04f 109 Pfam PF00717 Peptidase S24-like 6 66 5.1E-11 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Amir_6029 c22c3abcc1ecf52db8e9a3043cc50201 385 SUPERFAMILY SSF63829 82 321 8.67E-13 T 14-10-2018 Amir_6029 c22c3abcc1ecf52db8e9a3043cc50201 385 Gene3D G3DSA:2.120.10.30 52 376 1.2E-47 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_6029 c22c3abcc1ecf52db8e9a3043cc50201 385 Pfam PF07995 Glucose / Sorbosone dehydrogenase 97 286 2.9E-24 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase Amir_1924 29767ad30d1eb80879b626ec70ec58a8 670 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 93 248 2.9E-29 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Amir_2356 50c663e24d76413c87fc24a771934197 160 Pfam PF05130 FlgN protein 2 147 1.1E-11 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 Amir_4783 dc0b633de9094e60e1a1b468ce4edc03 263 SUPERFAMILY SSF52540 4 227 2.62E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4783 dc0b633de9094e60e1a1b468ce4edc03 263 Pfam PF00005 ABC transporter 21 169 4.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4783 dc0b633de9094e60e1a1b468ce4edc03 263 Gene3D G3DSA:3.40.50.300 4 253 2.0E-69 T 14-10-2018 Amir_4783 dc0b633de9094e60e1a1b468ce4edc03 263 SMART SM00382 29 214 1.6E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4783 dc0b633de9094e60e1a1b468ce4edc03 263 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3654 3a54e213b272729457de97109aa585bd 350 Gene3D G3DSA:3.20.20.100 1 338 3.5E-68 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3654 3a54e213b272729457de97109aa585bd 350 Pfam PF00248 Aldo/keto reductase family 11 327 1.4E-41 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_3654 3a54e213b272729457de97109aa585bd 350 SUPERFAMILY SSF51430 2 324 8.77E-60 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_5126 c6b35d3f2925ce01319206aa2cb4771c 184 Pfam PF12804 MobA-like NTP transferase domain 5 160 1.7E-29 T 14-10-2018 IPR025877 MobA-like NTP transferase Amir_5126 c6b35d3f2925ce01319206aa2cb4771c 184 Gene3D G3DSA:3.90.550.10 2 184 4.6E-37 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_5126 c6b35d3f2925ce01319206aa2cb4771c 184 SUPERFAMILY SSF53448 3 181 3.83E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_3624 b63d3f4e471201c5fdd1a72c4ca73a61 182 SUPERFAMILY SSF51161 51 182 2.77E-36 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Amir_3624 b63d3f4e471201c5fdd1a72c4ca73a61 182 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 137 165 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Amir_3624 b63d3f4e471201c5fdd1a72c4ca73a61 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 129 163 6.1E-9 T 14-10-2018 IPR001451 Hexapeptide repeat Amir_3624 b63d3f4e471201c5fdd1a72c4ca73a61 182 Gene3D G3DSA:2.160.10.10 7 181 8.0E-46 T 14-10-2018 Amir_0278 e0e4d6e0790ef9d8505e2a62892f4cf5 185 Gene3D G3DSA:1.10.357.10 50 167 7.9E-5 T 14-10-2018 Amir_0278 e0e4d6e0790ef9d8505e2a62892f4cf5 185 Pfam PF00482 Type II secretion system (T2SS), protein F 52 170 1.6E-14 T 14-10-2018 IPR018076 Type II secretion system F domain Amir_6574 ad07c09cc3f083d249fe11eea02f28f7 379 SUPERFAMILY SSF140453 48 130 1.16E-6 T 14-10-2018 IPR036689 ESAT-6-like superfamily Amir_6574 ad07c09cc3f083d249fe11eea02f28f7 379 Gene3D G3DSA:1.10.287.1060 43 131 3.2E-8 T 14-10-2018 Amir_1794 fb13744c922cf2dc9381c926c9dac2ab 382 Gene3D G3DSA:1.10.10.10 1 69 6.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1794 fb13744c922cf2dc9381c926c9dac2ab 382 Pfam PF00480 ROK family 76 363 3.8E-46 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_1794 fb13744c922cf2dc9381c926c9dac2ab 382 Gene3D G3DSA:3.30.420.40 81 362 6.3E-71 T 14-10-2018 Amir_1794 fb13744c922cf2dc9381c926c9dac2ab 382 SUPERFAMILY SSF53067 75 368 1.99E-47 T 14-10-2018 Amir_1794 fb13744c922cf2dc9381c926c9dac2ab 382 Gene3D G3DSA:3.30.420.40 200 352 6.3E-71 T 14-10-2018 Amir_1794 fb13744c922cf2dc9381c926c9dac2ab 382 SUPERFAMILY SSF46785 1 63 1.46E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0524 1cf68eef6542e2180103b2488db56010 397 SUPERFAMILY SSF51338 3 381 4.32E-20 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_0524 1cf68eef6542e2180103b2488db56010 397 Pfam PF07969 Amidohydrolase family 182 380 2.1E-13 T 14-10-2018 IPR013108 Amidohydrolase 3 Amir_0524 1cf68eef6542e2180103b2488db56010 397 Gene3D G3DSA:3.20.20.140 56 342 4.5E-128 T 14-10-2018 Amir_0524 1cf68eef6542e2180103b2488db56010 397 SUPERFAMILY SSF51556 55 345 2.35E-48 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_0524 1cf68eef6542e2180103b2488db56010 397 Gene3D G3DSA:2.30.40.10 8 376 4.5E-128 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_3391 aa0bcbff1fe9ccd7153e1d042a6ef744 183 Pfam PF13302 Acetyltransferase (GNAT) domain 16 152 5.4E-16 T 14-10-2018 IPR000182 GNAT domain Amir_3391 aa0bcbff1fe9ccd7153e1d042a6ef744 183 Gene3D G3DSA:3.40.630.30 4 183 5.0E-35 T 14-10-2018 Amir_3391 aa0bcbff1fe9ccd7153e1d042a6ef744 183 SUPERFAMILY SSF55729 7 176 3.3E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_2406 2ad0c9d27505e53d1a25d8c1c0320443 276 Gene3D G3DSA:1.10.3720.10 2 267 2.4E-58 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2406 2ad0c9d27505e53d1a25d8c1c0320443 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 255 5.0E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_2406 2ad0c9d27505e53d1a25d8c1c0320443 276 SUPERFAMILY SSF161098 7 275 1.59E-63 T 14-10-2018 IPR035906 MetI-like superfamily Amir_5818 68e776fb9acb64996fc656b05218ffaa 188 Gene3D G3DSA:3.40.630.30 5 176 3.2E-32 T 14-10-2018 Amir_5818 68e776fb9acb64996fc656b05218ffaa 188 Pfam PF00583 Acetyltransferase (GNAT) family 56 153 2.3E-7 T 14-10-2018 IPR000182 GNAT domain Amir_5818 68e776fb9acb64996fc656b05218ffaa 188 SUPERFAMILY SSF55729 5 160 1.19E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_5418 6fd59dff03ad307a215d2d9d282448c5 1060 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 571 678 5.0E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5418 6fd59dff03ad307a215d2d9d282448c5 1060 SUPERFAMILY SSF55874 554 678 3.27E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5418 6fd59dff03ad307a215d2d9d282448c5 1060 SMART SM00387 568 681 3.3E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5418 6fd59dff03ad307a215d2d9d282448c5 1060 Pfam PF00672 HAMP domain 385 452 6.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amir_5418 6fd59dff03ad307a215d2d9d282448c5 1060 Gene3D G3DSA:3.30.565.10 531 679 1.8E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5418 6fd59dff03ad307a215d2d9d282448c5 1060 Pfam PF08376 Nitrate and nitrite sensing 105 340 3.0E-27 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein Amir_1801 8756ea988f3c25cfc94131608ec8fac3 205 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 128 3.0E-18 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 Amir_1801 8756ea988f3c25cfc94131608ec8fac3 205 SUPERFAMILY SSF55961 3 142 4.08E-26 T 14-10-2018 Amir_1801 8756ea988f3c25cfc94131608ec8fac3 205 Gene3D G3DSA:3.30.530.20 1 141 5.4E-36 T 14-10-2018 IPR023393 START-like domain superfamily Amir_0405 e87615ef968a7147ccfd74588832e414 315 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 37 50 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Amir_0405 e87615ef968a7147ccfd74588832e414 315 SUPERFAMILY SSF53686 5 308 7.33E-87 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amir_0405 e87615ef968a7147ccfd74588832e414 315 Gene3D G3DSA:3.40.50.1100 9 304 6.3E-107 T 14-10-2018 Amir_0405 e87615ef968a7147ccfd74588832e414 315 Gene3D G3DSA:3.40.50.1100 45 139 6.3E-107 T 14-10-2018 Amir_0405 e87615ef968a7147ccfd74588832e414 315 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 300 1.3E-84 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amir_0405 e87615ef968a7147ccfd74588832e414 315 PIRSF PIRSF006278 51 314 2.2E-9 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase Amir_6678 99bb9c48590e2065307f2da0c77a852d 254 PIRSF PIRSF000216 5 239 5.3E-57 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6678 99bb9c48590e2065307f2da0c77a852d 254 Gene3D G3DSA:1.10.10.1590 18 89 1.4E-21 T 14-10-2018 Amir_6678 99bb9c48590e2065307f2da0c77a852d 254 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 29 180 3.2E-43 T 14-10-2018 Amir_6678 99bb9c48590e2065307f2da0c77a852d 254 SUPERFAMILY SSF52833 20 188 3.69E-43 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_6678 99bb9c48590e2065307f2da0c77a852d 254 Gene3D G3DSA:3.40.30.10 90 198 7.7E-21 T 14-10-2018 Amir_0379 4473f31e3dd428d5e9a33f364e24d440 233 SUPERFAMILY SSF52172 5 128 3.27E-38 T 14-10-2018 IPR011006 CheY-like superfamily Amir_0379 4473f31e3dd428d5e9a33f364e24d440 233 Pfam PF00072 Response regulator receiver domain 10 118 2.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0379 4473f31e3dd428d5e9a33f364e24d440 233 Gene3D G3DSA:3.40.50.2300 2 130 1.1E-33 T 14-10-2018 Amir_0379 4473f31e3dd428d5e9a33f364e24d440 233 SUPERFAMILY SSF46894 129 228 2.04E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_0379 4473f31e3dd428d5e9a33f364e24d440 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 228 8.6E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_0379 4473f31e3dd428d5e9a33f364e24d440 233 Gene3D G3DSA:1.10.10.10 131 231 7.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0379 4473f31e3dd428d5e9a33f364e24d440 233 SMART SM00862 153 228 8.2E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_0379 4473f31e3dd428d5e9a33f364e24d440 233 SMART SM00448 7 118 7.3E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_0534 4a156ac61060269de8393454cad8b724 86 Gene3D G3DSA:1.10.260.40 12 74 3.8E-21 T 14-10-2018 Amir_0534 4a156ac61060269de8393454cad8b724 86 SUPERFAMILY SSF47413 11 74 1.32E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_0534 4a156ac61060269de8393454cad8b724 86 SMART SM00530 15 70 8.2E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_0534 4a156ac61060269de8393454cad8b724 86 Pfam PF01381 Helix-turn-helix 19 68 1.6E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_1971 ed1d11be7698959608d750d35dd04bd4 478 SUPERFAMILY SSF75005 91 311 5.07E-15 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_1971 ed1d11be7698959608d750d35dd04bd4 478 SUPERFAMILY SSF110221 344 476 1.11E-36 T 14-10-2018 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily GO:0046373|GO:0046556 Amir_1971 ed1d11be7698959608d750d35dd04bd4 478 Pfam PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain 346 476 6.2E-43 T 14-10-2018 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain GO:0046373|GO:0046556 Amir_1971 ed1d11be7698959608d750d35dd04bd4 478 Gene3D G3DSA:2.80.10.50 341 478 2.4E-51 T 14-10-2018 Amir_1971 ed1d11be7698959608d750d35dd04bd4 478 Gene3D G3DSA:2.115.10.20 89 331 2.1E-16 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_0732 14af3751fcdbfd9dd1a884cf8123725d 382 SUPERFAMILY SSF56300 1 313 2.58E-52 T 14-10-2018 Amir_0732 14af3751fcdbfd9dd1a884cf8123725d 382 Gene3D G3DSA:3.60.21.10 1 268 2.4E-83 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Amir_0732 14af3751fcdbfd9dd1a884cf8123725d 382 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 4.5E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amir_0732 14af3751fcdbfd9dd1a884cf8123725d 382 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 245 3.8E-45 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 Amir_4786 267b11498fb72cc6f6016d65459c9343 189 SUPERFAMILY SSF48498 79 186 1.22E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4786 267b11498fb72cc6f6016d65459c9343 189 Pfam PF16859 Bacterial transcriptional repressor C-terminal 77 181 1.6E-16 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Amir_4786 267b11498fb72cc6f6016d65459c9343 189 Gene3D G3DSA:1.10.357.10 60 186 1.3E-18 T 14-10-2018 Amir_4786 267b11498fb72cc6f6016d65459c9343 189 SUPERFAMILY SSF46689 11 70 6.67E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4786 267b11498fb72cc6f6016d65459c9343 189 Gene3D G3DSA:1.10.10.60 10 57 2.2E-17 T 14-10-2018 Amir_4786 267b11498fb72cc6f6016d65459c9343 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 64 4.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3592 ff4adf532bc76f52bf8221860a1dace8 271 Gene3D G3DSA:3.40.50.300 2 249 6.8E-67 T 14-10-2018 Amir_3592 ff4adf532bc76f52bf8221860a1dace8 271 SUPERFAMILY SSF52540 3 228 2.66E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3592 ff4adf532bc76f52bf8221860a1dace8 271 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3592 ff4adf532bc76f52bf8221860a1dace8 271 Pfam PF00005 ABC transporter 20 168 3.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3592 ff4adf532bc76f52bf8221860a1dace8 271 SMART SM00382 29 223 3.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3592 ff4adf532bc76f52bf8221860a1dace8 271 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 13 202 5.3E-82 T 14-10-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 Amir_5894 fc535e9795da1c7bca3b08008f861194 555 Pfam PF07730 Histidine kinase 209 273 9.4E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_5894 fc535e9795da1c7bca3b08008f861194 555 SUPERFAMILY SSF55874 298 407 3.81E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5894 fc535e9795da1c7bca3b08008f861194 555 Gene3D G3DSA:3.30.565.10 280 406 2.0E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3321 29c4fee320f85b4f213f015c92b4d7ba 418 SUPERFAMILY SSF52540 35 223 2.04E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3321 29c4fee320f85b4f213f015c92b4d7ba 418 Pfam PF07728 AAA domain (dynein-related subfamily) 49 182 2.1E-7 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Amir_3321 29c4fee320f85b4f213f015c92b4d7ba 418 Gene3D G3DSA:3.40.50.300 33 193 1.0E-22 T 14-10-2018 Amir_4828 84090b6e7bff11cda63c3494600d955a 576 Gene3D G3DSA:2.160.20.10 210 565 7.7E-88 T 14-10-2018 IPR012334 Pectin lyase fold Amir_4828 84090b6e7bff11cda63c3494600d955a 576 Gene3D G3DSA:2.80.10.50 134 209 4.6E-7 T 14-10-2018 Amir_4828 84090b6e7bff11cda63c3494600d955a 576 Gene3D G3DSA:2.80.10.50 34 133 1.6E-20 T 14-10-2018 Amir_4828 84090b6e7bff11cda63c3494600d955a 576 SUPERFAMILY SSF51126 210 545 3.34E-47 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_4828 84090b6e7bff11cda63c3494600d955a 576 Pfam PF00652 Ricin-type beta-trefoil lectin domain 52 179 2.1E-19 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4828 84090b6e7bff11cda63c3494600d955a 576 Pfam PF13229 Right handed beta helix region 306 495 6.2E-10 T 14-10-2018 IPR039448 Right handed beta helix domain Amir_4828 84090b6e7bff11cda63c3494600d955a 576 SMART SM00458 49 182 1.2E-18 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4828 84090b6e7bff11cda63c3494600d955a 576 SUPERFAMILY SSF50370 47 183 1.33E-28 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_4367 c4dd063da2356c4da7d74872b2cc8398 325 Gene3D G3DSA:3.20.20.70 1 324 1.4E-122 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_4367 c4dd063da2356c4da7d74872b2cc8398 325 SUPERFAMILY SSF51412 2 314 1.44E-66 T 14-10-2018 Amir_4367 c4dd063da2356c4da7d74872b2cc8398 325 Pfam PF03060 Nitronate monooxygenase 4 308 5.8E-57 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Amir_0837 db9338d15e61122f38f06344bc4711bf 450 Gene3D G3DSA:1.20.1250.20 230 439 1.5E-61 T 14-10-2018 Amir_0837 db9338d15e61122f38f06344bc4711bf 450 SUPERFAMILY SSF103473 23 435 9.81E-39 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_0837 db9338d15e61122f38f06344bc4711bf 450 Gene3D G3DSA:1.20.1250.20 9 228 6.9E-67 T 14-10-2018 Amir_0837 db9338d15e61122f38f06344bc4711bf 450 Pfam PF07690 Major Facilitator Superfamily 60 396 1.5E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_1618 50d0d8b64eaf27802ae29b22001f399b 369 Pfam PF07730 Histidine kinase 160 221 2.1E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_1618 50d0d8b64eaf27802ae29b22001f399b 369 SUPERFAMILY SSF55874 236 351 2.41E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1618 50d0d8b64eaf27802ae29b22001f399b 369 Gene3D G3DSA:3.30.565.10 225 351 1.9E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3314 df0821fc8f53f2de1b2e901baf1fccc5 222 SMART SM00448 5 118 3.1E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3314 df0821fc8f53f2de1b2e901baf1fccc5 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 177 204 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3314 df0821fc8f53f2de1b2e901baf1fccc5 222 SUPERFAMILY SSF52172 4 131 7.4E-32 T 14-10-2018 IPR011006 CheY-like superfamily Amir_3314 df0821fc8f53f2de1b2e901baf1fccc5 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 216 1.3E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3314 df0821fc8f53f2de1b2e901baf1fccc5 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 193 2.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3314 df0821fc8f53f2de1b2e901baf1fccc5 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 205 2.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3314 df0821fc8f53f2de1b2e901baf1fccc5 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 177 2.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3314 df0821fc8f53f2de1b2e901baf1fccc5 222 Gene3D G3DSA:3.40.50.12740 5 220 2.4E-60 T 14-10-2018 Amir_3314 df0821fc8f53f2de1b2e901baf1fccc5 222 SUPERFAMILY SSF46894 153 218 2.21E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_3314 df0821fc8f53f2de1b2e901baf1fccc5 222 SMART SM00421 160 217 8.9E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_3314 df0821fc8f53f2de1b2e901baf1fccc5 222 Pfam PF00072 Response regulator receiver domain 7 118 2.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5864 efe9de0d94dda4780141f8d47d7835c6 392 SUPERFAMILY SSF53383 14 382 8.38E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_5864 efe9de0d94dda4780141f8d47d7835c6 392 Gene3D G3DSA:3.40.640.10 54 284 1.6E-116 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_5864 efe9de0d94dda4780141f8d47d7835c6 392 Gene3D G3DSA:3.90.1150.10 40 370 1.6E-116 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_5864 efe9de0d94dda4780141f8d47d7835c6 392 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Amir_5864 efe9de0d94dda4780141f8d47d7835c6 392 Pfam PF00155 Aminotransferase class I and II 39 378 4.8E-60 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_6814 759fd29c3624cca7892aff5fc5d3428e 1336 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 1218 1301 1.3E-9 T 14-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain Amir_6814 759fd29c3624cca7892aff5fc5d3428e 1336 Gene3D G3DSA:1.10.260.150 892 1206 8.2E-62 T 14-10-2018 Amir_6814 759fd29c3624cca7892aff5fc5d3428e 1336 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 935 1101 2.2E-45 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amir_6814 759fd29c3624cca7892aff5fc5d3428e 1336 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 936 1100 2.7E-39 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amir_0910 9e186773a62472308758504ee17e4d39 1364 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 1138 1285 1.1E-13 T 14-10-2018 IPR006342 Methyltransferase FkbM Amir_0910 9e186773a62472308758504ee17e4d39 1364 SUPERFAMILY SSF53335 1095 1310 1.37E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_0910 9e186773a62472308758504ee17e4d39 1364 Gene3D G3DSA:3.40.50.2000 670 857 4.5E-11 T 14-10-2018 Amir_0910 9e186773a62472308758504ee17e4d39 1364 Gene3D G3DSA:3.40.50.150 1128 1295 7.5E-20 T 14-10-2018 Amir_0910 9e186773a62472308758504ee17e4d39 1364 Pfam PF05050 Methyltransferase FkbM domain 1140 1309 2.9E-9 T 14-10-2018 IPR006342 Methyltransferase FkbM Amir_0910 9e186773a62472308758504ee17e4d39 1364 SUPERFAMILY SSF53756 637 853 3.83E-8 T 14-10-2018 Amir_6643 6d933d03c84e7b383f1e00e707d2d2eb 413 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 213 236 8.2E-11 T 14-10-2018 Amir_6643 6d933d03c84e7b383f1e00e707d2d2eb 413 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 177 201 8.2E-11 T 14-10-2018 Amir_6643 6d933d03c84e7b383f1e00e707d2d2eb 413 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 244 268 8.2E-11 T 14-10-2018 Amir_6643 6d933d03c84e7b383f1e00e707d2d2eb 413 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 130 151 8.2E-11 T 14-10-2018 Amir_6643 6d933d03c84e7b383f1e00e707d2d2eb 413 Gene3D G3DSA:3.40.640.10 78 300 4.6E-133 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_6643 6d933d03c84e7b383f1e00e707d2d2eb 413 Gene3D G3DSA:3.90.1150.10 40 404 4.6E-133 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_6643 6d933d03c84e7b383f1e00e707d2d2eb 413 SUPERFAMILY SSF53383 17 411 1.6E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_6643 6d933d03c84e7b383f1e00e707d2d2eb 413 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 250 263 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Amir_6643 6d933d03c84e7b383f1e00e707d2d2eb 413 Pfam PF00155 Aminotransferase class I and II 46 404 1.7E-73 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_5124 3ad8f628ddbe6808ed99a9e96fbc04ea 272 Pfam PF00561 alpha/beta hydrolase fold 22 256 2.4E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_5124 3ad8f628ddbe6808ed99a9e96fbc04ea 272 SUPERFAMILY SSF53474 11 269 2.49E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5124 3ad8f628ddbe6808ed99a9e96fbc04ea 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 4.8E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_5124 3ad8f628ddbe6808ed99a9e96fbc04ea 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 4.8E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_5124 3ad8f628ddbe6808ed99a9e96fbc04ea 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 4.8E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_5124 3ad8f628ddbe6808ed99a9e96fbc04ea 272 Gene3D G3DSA:3.40.50.1820 3 270 4.0E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5124 3ad8f628ddbe6808ed99a9e96fbc04ea 272 PRINTS PR00412 Epoxide hydrolase signature 27 45 3.1E-17 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_5124 3ad8f628ddbe6808ed99a9e96fbc04ea 272 PRINTS PR00412 Epoxide hydrolase signature 93 106 3.1E-17 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_5124 3ad8f628ddbe6808ed99a9e96fbc04ea 272 PRINTS PR00412 Epoxide hydrolase signature 107 120 3.1E-17 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_5124 3ad8f628ddbe6808ed99a9e96fbc04ea 272 PRINTS PR00412 Epoxide hydrolase signature 212 228 3.1E-17 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_5124 3ad8f628ddbe6808ed99a9e96fbc04ea 272 PRINTS PR00412 Epoxide hydrolase signature 246 268 3.1E-17 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_5124 3ad8f628ddbe6808ed99a9e96fbc04ea 272 PRINTS PR00412 Epoxide hydrolase signature 47 62 3.1E-17 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_3992 18c21f6663d522b0d20f22a0110d2377 248 Gene3D G3DSA:3.40.50.720 4 246 1.3E-27 T 14-10-2018 Amir_3992 18c21f6663d522b0d20f22a0110d2377 248 Pfam PF13460 NAD(P)H-binding 9 174 1.7E-10 T 14-10-2018 IPR016040 NAD(P)-binding domain Amir_3992 18c21f6663d522b0d20f22a0110d2377 248 SUPERFAMILY SSF51735 1 206 1.13E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1741 1f9bb9191d9584f5d05582431cb8728d 319 Gene3D G3DSA:2.120.10.30 174 318 5.1E-14 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amir_1741 1f9bb9191d9584f5d05582431cb8728d 319 SUPERFAMILY SSF69322 82 301 2.35E-12 T 14-10-2018 Amir_0945 df18a4761814f943842cf3b534009bc7 229 Gene3D G3DSA:3.40.50.300 1 225 3.4E-68 T 14-10-2018 Amir_0945 df18a4761814f943842cf3b534009bc7 229 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_0945 df18a4761814f943842cf3b534009bc7 229 SMART SM00382 28 215 3.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_0945 df18a4761814f943842cf3b534009bc7 229 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 8.5E-86 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 Amir_0945 df18a4761814f943842cf3b534009bc7 229 SUPERFAMILY SSF52540 1 221 5.47E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0945 df18a4761814f943842cf3b534009bc7 229 Pfam PF00005 ABC transporter 19 166 1.5E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6058 fdbdda8936c5e83a51120fc6ebb209ee 417 Pfam PF00534 Glycosyl transferases group 1 216 374 3.1E-39 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Amir_6058 fdbdda8936c5e83a51120fc6ebb209ee 417 SUPERFAMILY SSF53756 1 396 2.04E-97 T 14-10-2018 Amir_6058 fdbdda8936c5e83a51120fc6ebb209ee 417 Gene3D G3DSA:3.40.50.2000 5 394 1.5E-100 T 14-10-2018 Amir_6058 fdbdda8936c5e83a51120fc6ebb209ee 417 Pfam PF13439 Glycosyltransferase Family 4 15 200 1.7E-30 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amir_6058 fdbdda8936c5e83a51120fc6ebb209ee 417 Gene3D G3DSA:3.40.50.2000 196 378 1.5E-100 T 14-10-2018 Amir_6345 82b30606a93c8cb42ed9dc89a7fe4184 364 Gene3D G3DSA:3.40.50.2000 14 356 6.0E-50 T 14-10-2018 Amir_6345 82b30606a93c8cb42ed9dc89a7fe4184 364 Pfam PF13439 Glycosyltransferase Family 4 21 181 1.7E-13 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amir_6345 82b30606a93c8cb42ed9dc89a7fe4184 364 Gene3D G3DSA:3.40.50.2000 178 340 6.0E-50 T 14-10-2018 Amir_6345 82b30606a93c8cb42ed9dc89a7fe4184 364 Pfam PF13692 Glycosyl transferases group 1 203 324 6.4E-19 T 14-10-2018 Amir_6345 82b30606a93c8cb42ed9dc89a7fe4184 364 SUPERFAMILY SSF53756 18 361 8.52E-58 T 14-10-2018 Amir_6756 0a1f6008b03da6de748386b8e9332936 165 SUPERFAMILY SSF69635 7 133 2.98E-32 T 14-10-2018 Amir_6756 0a1f6008b03da6de748386b8e9332936 165 Pfam PF10722 Putative bacterial sensory transduction regulator 10 130 5.5E-25 T 14-10-2018 IPR019660 Putative sensory transduction regulator YbjN Amir_0648 6371d55849ba1836d67a3a4d5d40d11c 273 SUPERFAMILY SSF53850 37 273 2.2E-78 T 14-10-2018 Amir_0648 6371d55849ba1836d67a3a4d5d40d11c 273 Pfam PF03180 NLPA lipoprotein 37 273 1.5E-88 T 14-10-2018 IPR004872 Lipoprotein NlpA family Amir_0648 6371d55849ba1836d67a3a4d5d40d11c 273 Gene3D G3DSA:3.40.190.10 119 223 2.9E-97 T 14-10-2018 Amir_0648 6371d55849ba1836d67a3a4d5d40d11c 273 PIRSF PIRSF002854 1 273 4.1E-103 T 14-10-2018 IPR004872 Lipoprotein NlpA family Amir_0648 6371d55849ba1836d67a3a4d5d40d11c 273 Gene3D G3DSA:3.40.190.10 37 270 2.9E-97 T 14-10-2018 Amir_3642 7d1363052f7d54cc80a32137b64acb25 105 Pfam PF02467 Transcription factor WhiB 46 91 1.7E-10 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain Amir_1535 9d1328f1a0460723ac1020bf3a311e6e 113 Pfam PF03995 Peptidase inhibitor family I36 20 90 1.2E-13 T 14-10-2018 Amir_6018 a7b765ec1a67039a87f53ffe836d8075 89 Pfam PF04149 Domain of unknown function (DUF397) 23 81 1.8E-13 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_5330 029e9a702e259d69c35b318610e6c6b3 190 SUPERFAMILY SSF46689 5 75 1.03E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5330 029e9a702e259d69c35b318610e6c6b3 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5330 029e9a702e259d69c35b318610e6c6b3 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5330 029e9a702e259d69c35b318610e6c6b3 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 55 5.8E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5330 029e9a702e259d69c35b318610e6c6b3 190 Gene3D G3DSA:1.10.357.10 1 190 1.1E-44 T 14-10-2018 Amir_4087 6d05e47c4d41fce3a24bb188bd8a9e60 173 Gene3D G3DSA:1.10.10.10 2 163 3.4E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4087 6d05e47c4d41fce3a24bb188bd8a9e60 173 SUPERFAMILY SSF46785 6 131 6.0E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4087 6d05e47c4d41fce3a24bb188bd8a9e60 173 Pfam PF01638 HxlR-like helix-turn-helix 18 105 4.0E-14 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type Amir_3562 45c9e1133709a037325601c1084c97ff 327 Gene3D G3DSA:1.20.1530.20 14 316 2.9E-20 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Amir_3562 45c9e1133709a037325601c1084c97ff 327 Pfam PF01758 Sodium Bile acid symporter family 47 218 5.0E-15 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Amir_5289 dbee88dadca335cf690a9718b0dad72e 278 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 219 1.8E-29 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Amir_5289 dbee88dadca335cf690a9718b0dad72e 278 SUPERFAMILY SSF52096 2 247 3.39E-45 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_5289 dbee88dadca335cf690a9718b0dad72e 278 Gene3D G3DSA:3.90.226.10 2 277 4.8E-78 T 14-10-2018 Amir_3828 6899a290435d7e2ca24bfa86d6528787 502 SUPERFAMILY SSF89796 226 459 4.84E-44 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Amir_3828 6899a290435d7e2ca24bfa86d6528787 502 Gene3D G3DSA:3.40.50.10540 222 487 1.7E-42 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Amir_3828 6899a290435d7e2ca24bfa86d6528787 502 SUPERFAMILY SSF89796 11 197 8.89E-13 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Amir_3828 6899a290435d7e2ca24bfa86d6528787 502 Pfam PF02515 CoA-transferase family III 228 454 4.5E-37 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 Amir_1542 cbd02ab8e392d5cc8a1ac2c8a0bbc0ac 300 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 199 2.7E-10 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_1542 cbd02ab8e392d5cc8a1ac2c8a0bbc0ac 300 SUPERFAMILY SSF51735 8 293 1.42E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1542 cbd02ab8e392d5cc8a1ac2c8a0bbc0ac 300 Gene3D G3DSA:3.40.50.720 6 296 2.0E-27 T 14-10-2018 Amir_3764 5edec6b7f8bdf97606e2fe16e22920e0 409 Pfam PF14072 DNA-sulfur modification-associated 34 397 5.3E-78 T 14-10-2018 IPR017642 DNA sulphur modification protein DndB Amir_3764 5edec6b7f8bdf97606e2fe16e22920e0 409 TIGRFAM TIGR03187 DGQHR: DGQHR domain 39 303 4.8E-27 T 14-10-2018 IPR017601 DGQHR-containing domain Amir_2015 9e114e36fbdef8b650af75f76857725f 141 Gene3D G3DSA:2.30.31.20 2 137 3.4E-47 T 14-10-2018 IPR038658 Sporulation-specific cell division protein SsgB superfamily Amir_2015 9e114e36fbdef8b650af75f76857725f 141 Pfam PF04686 Streptomyces sporulation and cell division protein, SsgA 26 122 3.9E-35 T 14-10-2018 IPR006776 Sporulation-specific cell division protein SsgB GO:0051301 Amir_7004 58a23ee4641c95f8d8707cf067c760d7 610 SUPERFAMILY SSF52540 41 275 3.34E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_7004 58a23ee4641c95f8d8707cf067c760d7 610 Gene3D G3DSA:3.40.50.300 45 282 5.9E-27 T 14-10-2018 Amir_7004 58a23ee4641c95f8d8707cf067c760d7 610 Pfam PF00350 Dynamin family 45 196 1.5E-14 T 14-10-2018 IPR022812 Dynamin superfamily Amir_1705 6fbcc9d49aa10e18bdc77ee45b2bea39 117 Pfam PF06993 Protein of unknown function (DUF1304) 7 114 4.1E-38 T 14-10-2018 IPR009732 Protein of unknown function DUF1304 Amir_2048 023360f80e58d018e9f5b0a677f98b6e 679 Gene3D G3DSA:3.20.20.80 50 352 9.0E-63 T 14-10-2018 Amir_2048 023360f80e58d018e9f5b0a677f98b6e 679 Gene3D G3DSA:2.60.40.290 569 678 6.8E-28 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_2048 023360f80e58d018e9f5b0a677f98b6e 679 Gene3D G3DSA:2.60.40.1180 377 475 4.2E-12 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amir_2048 023360f80e58d018e9f5b0a677f98b6e 679 SUPERFAMILY SSF51445 57 333 1.89E-43 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_2048 023360f80e58d018e9f5b0a677f98b6e 679 SUPERFAMILY SSF49265 476 573 1.13E-9 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 Amir_2048 023360f80e58d018e9f5b0a677f98b6e 679 Pfam PF00553 Cellulose binding domain 575 676 8.4E-22 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_2048 023360f80e58d018e9f5b0a677f98b6e 679 Gene3D G3DSA:2.60.40.10 481 567 5.6E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2048 023360f80e58d018e9f5b0a677f98b6e 679 SMART SM00060 482 557 6.8E-5 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 Amir_2048 023360f80e58d018e9f5b0a677f98b6e 679 SUPERFAMILY SSF49384 570 677 1.95E-25 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_2048 023360f80e58d018e9f5b0a677f98b6e 679 SMART SM00637 575 676 1.2E-29 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_3883 0b2bb7fee75f704093815f4c2486d38d 406 Gene3D G3DSA:3.30.559.30 169 377 8.9E-52 T 14-10-2018 Amir_3883 0b2bb7fee75f704093815f4c2486d38d 406 SUPERFAMILY SSF52777 13 146 4.3E-13 T 14-10-2018 Amir_3883 0b2bb7fee75f704093815f4c2486d38d 406 Pfam PF00668 Condensation domain 25 248 5.7E-6 T 14-10-2018 IPR001242 Condensation domain Amir_3883 0b2bb7fee75f704093815f4c2486d38d 406 SUPERFAMILY SSF52777 182 405 2.56E-27 T 14-10-2018 Amir_3883 0b2bb7fee75f704093815f4c2486d38d 406 Pfam PF16911 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus 293 399 2.5E-14 T 14-10-2018 IPR031641 Phthiocerol/phthiodiolone dimycocerosyl transferase, C-terminal Amir_3883 0b2bb7fee75f704093815f4c2486d38d 406 Gene3D G3DSA:3.30.559.10 3 363 8.9E-52 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_5002 8586003495bd11e09ade7a39f8db5187 325 Gene3D G3DSA:3.40.50.920 184 315 3.5E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_5002 8586003495bd11e09ade7a39f8db5187 325 Pfam PF02780 Transketolase, C-terminal domain 187 307 3.6E-40 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Amir_5002 8586003495bd11e09ade7a39f8db5187 325 Gene3D G3DSA:3.40.50.970 1 183 6.3E-76 T 14-10-2018 Amir_5002 8586003495bd11e09ade7a39f8db5187 325 Pfam PF02779 Transketolase, pyrimidine binding domain 1 172 3.2E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amir_5002 8586003495bd11e09ade7a39f8db5187 325 SMART SM00861 1 174 2.1E-65 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amir_5002 8586003495bd11e09ade7a39f8db5187 325 SUPERFAMILY SSF52922 185 311 1.7E-39 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amir_5002 8586003495bd11e09ade7a39f8db5187 325 SUPERFAMILY SSF52518 1 177 1.37E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_1103 365d71a4d99a952cac27954403ad7407 169 Gene3D G3DSA:3.90.79.10 8 140 3.4E-21 T 14-10-2018 Amir_1103 365d71a4d99a952cac27954403ad7407 169 SUPERFAMILY SSF55811 15 134 7.72E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_1103 365d71a4d99a952cac27954403ad7407 169 PRINTS PR00502 NUDIX hydrolase family signature 42 56 2.9E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_1103 365d71a4d99a952cac27954403ad7407 169 PRINTS PR00502 NUDIX hydrolase family signature 56 71 2.9E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_1103 365d71a4d99a952cac27954403ad7407 169 Pfam PF00293 NUDIX domain 16 128 5.7E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_1103 365d71a4d99a952cac27954403ad7407 169 ProSitePatterns PS00893 Nudix box signature. 47 68 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_2816 25f8b0df95384a69de24d0981538dd70 322 Pfam PF01370 NAD dependent epimerase/dehydratase family 13 221 1.0E-41 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_2816 25f8b0df95384a69de24d0981538dd70 322 SUPERFAMILY SSF51735 11 305 8.25E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2816 25f8b0df95384a69de24d0981538dd70 322 Gene3D G3DSA:3.90.25.10 173 302 5.4E-83 T 14-10-2018 Amir_2816 25f8b0df95384a69de24d0981538dd70 322 Gene3D G3DSA:3.40.50.720 13 288 5.4E-83 T 14-10-2018 Amir_2816 25f8b0df95384a69de24d0981538dd70 322 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amir_3470 569caf41a2683dcfebb4fa645e74dcd4 331 Gene3D G3DSA:3.40.50.2300 164 291 6.7E-76 T 14-10-2018 Amir_3470 569caf41a2683dcfebb4fa645e74dcd4 331 SMART SM00354 3 73 1.6E-24 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_3470 569caf41a2683dcfebb4fa645e74dcd4 331 Pfam PF13377 Periplasmic binding protein-like domain 172 327 3.4E-39 T 14-10-2018 Amir_3470 569caf41a2683dcfebb4fa645e74dcd4 331 SUPERFAMILY SSF53822 63 328 3.53E-71 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_3470 569caf41a2683dcfebb4fa645e74dcd4 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 5.4E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_3470 569caf41a2683dcfebb4fa645e74dcd4 331 Gene3D G3DSA:3.40.50.2300 57 308 6.7E-76 T 14-10-2018 Amir_3470 569caf41a2683dcfebb4fa645e74dcd4 331 Gene3D G3DSA:1.10.260.40 1 56 4.0E-23 T 14-10-2018 Amir_3470 569caf41a2683dcfebb4fa645e74dcd4 331 SUPERFAMILY SSF47413 2 61 6.75E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1068 84ae3615667a697b61519fa4a59b92ec 164 SMART SM00347 39 140 5.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_1068 84ae3615667a697b61519fa4a59b92ec 164 Pfam PF01047 MarR family 53 104 2.2E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_1068 84ae3615667a697b61519fa4a59b92ec 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 100 116 1.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_1068 84ae3615667a697b61519fa4a59b92ec 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 96 1.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_1068 84ae3615667a697b61519fa4a59b92ec 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 130 150 1.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_1068 84ae3615667a697b61519fa4a59b92ec 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 80 1.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_1068 84ae3615667a697b61519fa4a59b92ec 164 SUPERFAMILY SSF46785 9 153 1.19E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1068 84ae3615667a697b61519fa4a59b92ec 164 Gene3D G3DSA:1.10.10.10 15 153 6.9E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0424 5ac5ad9ed836ffbb6555347c073b4050 276 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 13 269 4.4E-82 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amir_0424 5ac5ad9ed836ffbb6555347c073b4050 276 SUPERFAMILY SSF53613 9 272 1.15E-75 T 14-10-2018 IPR029056 Ribokinase-like Amir_0424 5ac5ad9ed836ffbb6555347c073b4050 276 Pfam PF08543 Phosphomethylpyrimidine kinase 20 268 1.0E-79 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Amir_0424 5ac5ad9ed836ffbb6555347c073b4050 276 Gene3D G3DSA:3.40.1190.20 3 276 7.7E-90 T 14-10-2018 IPR029056 Ribokinase-like Amir_4617 65f95d789578ff5afdf8d7a2e89290e6 126 Gene3D G3DSA:2.60.20.10 34 125 5.3E-5 T 14-10-2018 Amir_4617 65f95d789578ff5afdf8d7a2e89290e6 126 Pfam PF03995 Peptidase inhibitor family I36 33 103 3.2E-8 T 14-10-2018 Amir_5246 a5a5390840afc7aa5147a8e3ba8277b5 190 Pfam PF00156 Phosphoribosyl transferase domain 16 161 1.1E-21 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Amir_5246 a5a5390840afc7aa5147a8e3ba8277b5 190 SUPERFAMILY SSF53271 16 185 1.22E-40 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Amir_5246 a5a5390840afc7aa5147a8e3ba8277b5 190 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 14 190 34.584 T 14-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Amir_5246 a5a5390840afc7aa5147a8e3ba8277b5 190 Gene3D G3DSA:3.40.50.2020 7 190 5.8E-62 T 14-10-2018 Amir_0346 24113cc6bd8588807f64aff0367a940b 367 Pfam PF13377 Periplasmic binding protein-like domain 178 352 6.9E-29 T 14-10-2018 Amir_0346 24113cc6bd8588807f64aff0367a940b 367 SUPERFAMILY SSF47413 10 68 4.03E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_0346 24113cc6bd8588807f64aff0367a940b 367 SMART SM00354 10 81 6.6E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_0346 24113cc6bd8588807f64aff0367a940b 367 SUPERFAMILY SSF53822 83 347 1.01E-43 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_0346 24113cc6bd8588807f64aff0367a940b 367 Gene3D G3DSA:3.40.50.2300 170 315 5.4E-58 T 14-10-2018 Amir_0346 24113cc6bd8588807f64aff0367a940b 367 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 54 4.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_0346 24113cc6bd8588807f64aff0367a940b 367 Gene3D G3DSA:1.10.260.40 2 64 1.1E-16 T 14-10-2018 Amir_0346 24113cc6bd8588807f64aff0367a940b 367 Gene3D G3DSA:3.40.50.2300 65 331 5.4E-58 T 14-10-2018 Amir_0727 9570b72ccfc79afeef6747ab9221bfda 420 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 19 408 2.9E-110 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Amir_0727 9570b72ccfc79afeef6747ab9221bfda 420 Pfam PF13742 OB-fold nucleic acid binding domain 19 110 5.0E-14 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 Amir_0727 9570b72ccfc79afeef6747ab9221bfda 420 Pfam PF02601 Exonuclease VII, large subunit 133 355 1.9E-59 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Amir_0727 9570b72ccfc79afeef6747ab9221bfda 420 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 11 409 23.763 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Amir_4467 29699de614dc31fdc753ddfdf82870f3 241 Pfam PF08685 GON domain 36 91 3.2E-6 T 14-10-2018 IPR012314 Peptidase M12B, GON-ADAMTSs GO:0004222|GO:0008270 Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 Amir_4467 29699de614dc31fdc753ddfdf82870f3 241 Pfam PF08685 GON domain 101 206 1.4E-8 T 14-10-2018 IPR012314 Peptidase M12B, GON-ADAMTSs GO:0004222|GO:0008270 Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 Amir_0011 cbb79197cc72121a47310bd3610c0cb4 181 Pfam PF09449 Domain of unknown function (DUF2020) 50 179 5.6E-36 T 14-10-2018 IPR018567 Domain of unknown function DUF2020 Amir_0011 cbb79197cc72121a47310bd3610c0cb4 181 SUPERFAMILY SSF55724 38 179 3.09E-50 T 14-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Amir_0011 cbb79197cc72121a47310bd3610c0cb4 181 Gene3D G3DSA:3.40.1000.10 34 180 3.9E-48 T 14-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Amir_2582 028b7ceecdaaff2ed877d5290a771ac3 149 SUPERFAMILY SSF160424 10 141 1.44E-25 T 14-10-2018 IPR036170 Probable antitoxin YezG superfamily Amir_3409 07a606a6046083f60feb15b6b030e1be 104 SUPERFAMILY SSF46785 6 91 2.51E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3409 07a606a6046083f60feb15b6b030e1be 104 Gene3D G3DSA:1.10.10.10 2 101 1.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3409 07a606a6046083f60feb15b6b030e1be 104 Pfam PF03551 Transcriptional regulator PadR-like family 8 81 3.6E-19 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal Amir_0991 4ef6612e0eedd80aa2746f1a290e8b6a 261 Gene3D G3DSA:3.40.1490.10 175 261 2.0E-10 T 14-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 Amir_0991 4ef6612e0eedd80aa2746f1a290e8b6a 261 Pfam PF01981 Peptidyl-tRNA hydrolase PTH2 182 260 3.7E-7 T 14-10-2018 IPR002833 Peptidyl-tRNA hydrolase, PTH2 GO:0004045 MetaCyc: PWY-6308 Amir_0991 4ef6612e0eedd80aa2746f1a290e8b6a 261 SUPERFAMILY SSF102462 176 260 1.59E-16 T 14-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 Amir_3071 d48fcd87605ada7debfb11ef7c0fad72 612 SUPERFAMILY SSF56235 1 227 4.2E-64 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_3071 d48fcd87605ada7debfb11ef7c0fad72 612 SUPERFAMILY SSF52402 222 578 1.5E-61 T 14-10-2018 Amir_3071 d48fcd87605ada7debfb11ef7c0fad72 612 PIRSF PIRSF001589 1 609 2.1E-134 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Amir_3071 d48fcd87605ada7debfb11ef7c0fad72 612 Pfam PF00733 Asparagine synthase 243 582 6.7E-81 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Amir_3071 d48fcd87605ada7debfb11ef7c0fad72 612 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 537 1.1E-139 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Amir_3071 d48fcd87605ada7debfb11ef7c0fad72 612 Pfam PF13537 Glutamine amidotransferase domain 51 172 1.1E-45 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Amir_3071 d48fcd87605ada7debfb11ef7c0fad72 612 Gene3D G3DSA:3.60.20.10 4 185 2.7E-60 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_2562 246651ebfc5d140b64fb21c160bb5c3a 406 Pfam PF10923 P-loop Domain of unknown function (DUF2791) 5 383 9.3E-91 T 14-10-2018 IPR021228 Protein of unknown function DUF2791 Amir_5263 1f5b25d69b3fdeab19236e45d50f9877 409 Pfam PF02618 YceG-like family 81 398 1.8E-59 T 14-10-2018 IPR003770 Endolytic murein transglycosylase Amir_5263 1f5b25d69b3fdeab19236e45d50f9877 409 Gene3D G3DSA:1.10.8.1150 76 147 6.7E-8 T 14-10-2018 Amir_5263 1f5b25d69b3fdeab19236e45d50f9877 409 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 40 409 26.548 T 14-10-2018 IPR003770 Endolytic murein transglycosylase Amir_5263 1f5b25d69b3fdeab19236e45d50f9877 409 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 44 401 5.4E-39 T 14-10-2018 IPR003770 Endolytic murein transglycosylase Amir_4554 54b66fa8e6108c3d04c9cf5690c03185 408 Pfam PF13560 Helix-turn-helix domain 5 62 2.0E-6 T 14-10-2018 Amir_4554 54b66fa8e6108c3d04c9cf5690c03185 408 SMART SM00530 8 62 0.0012 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_4554 54b66fa8e6108c3d04c9cf5690c03185 408 Gene3D G3DSA:1.10.260.40 1 63 4.3E-7 T 14-10-2018 Amir_4554 54b66fa8e6108c3d04c9cf5690c03185 408 SUPERFAMILY SSF47413 4 61 2.14E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_4554 54b66fa8e6108c3d04c9cf5690c03185 408 Gene3D G3DSA:1.25.40.10 101 404 2.2E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_5735 d76214d68e6eb0c860a41d4e2dd581a5 251 SUPERFAMILY SSF160920 6 244 2.48E-107 T 14-10-2018 IPR038021 Putative hydro-lyase Amir_5735 d76214d68e6eb0c860a41d4e2dd581a5 251 Gene3D G3DSA:3.40.1640.10 8 239 6.9E-90 T 14-10-2018 Amir_5735 d76214d68e6eb0c860a41d4e2dd581a5 251 Gene3D G3DSA:3.30.2040.10 111 223 6.9E-90 T 14-10-2018 Amir_5735 d76214d68e6eb0c860a41d4e2dd581a5 251 PIRSF PIRSF029755 2 251 1.4E-111 T 14-10-2018 IPR016938 Uncharacterised protein family UPF0317 Amir_5735 d76214d68e6eb0c860a41d4e2dd581a5 251 Hamap MF_01830 Putative hydro-lyase . 3 251 51.747 T 14-10-2018 IPR016938 Uncharacterised protein family UPF0317 Amir_5735 d76214d68e6eb0c860a41d4e2dd581a5 251 Pfam PF07286 Protein of unknown function (DUF1445) 101 243 1.2E-62 T 14-10-2018 IPR009906 D-glutamate cyclase Amir_1532 1d377d6db8af41713378e3ef15f6d2a1 417 Pfam PF00823 PPE family 33 166 1.5E-8 T 14-10-2018 IPR000030 PPE family Amir_1532 1d377d6db8af41713378e3ef15f6d2a1 417 Gene3D G3DSA:1.20.1260.20 26 180 2.1E-10 T 14-10-2018 IPR038332 PPE superfamily Amir_1532 1d377d6db8af41713378e3ef15f6d2a1 417 SUPERFAMILY SSF140459 33 179 8.89E-11 T 14-10-2018 Amir_0921 42788a40ac3714af3975103dc6fe4231 483 SUPERFAMILY SSF52540 219 459 3.17E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0921 42788a40ac3714af3975103dc6fe4231 483 Gene3D G3DSA:3.40.50.300 218 474 4.9E-40 T 14-10-2018 Amir_0921 42788a40ac3714af3975103dc6fe4231 483 Pfam PF01580 FtsK/SpoIIIE family 240 412 1.3E-8 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Amir_0127 43a18d88ed72468ebe8f9b7212df09da 299 SUPERFAMILY SSF53448 3 247 6.19E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0127 43a18d88ed72468ebe8f9b7212df09da 299 Pfam PF00535 Glycosyl transferase family 2 6 119 9.7E-23 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_0127 43a18d88ed72468ebe8f9b7212df09da 299 Gene3D G3DSA:3.90.550.10 1 220 5.9E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0468 02c7faf28f24f2a6451a8bd23e3cfad6 141 Pfam PF02391 MoaE protein 9 121 3.4E-34 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Amir_0468 02c7faf28f24f2a6451a8bd23e3cfad6 141 Gene3D G3DSA:3.90.1170.40 2 139 1.2E-44 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Amir_0468 02c7faf28f24f2a6451a8bd23e3cfad6 141 SUPERFAMILY SSF54690 8 139 4.84E-37 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Amir_6753 962edc7b892e4abd1ef3860099eea1df 248 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Amir_6753 962edc7b892e4abd1ef3860099eea1df 248 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 5.1E-109 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 Amir_6753 962edc7b892e4abd1ef3860099eea1df 248 Gene3D G3DSA:3.40.50.1240 3 244 1.5E-81 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_6753 962edc7b892e4abd1ef3860099eea1df 248 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 231 42.332 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 Amir_6753 962edc7b892e4abd1ef3860099eea1df 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 146 208 7.2E-5 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_6753 962edc7b892e4abd1ef3860099eea1df 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 129 8.4E-27 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_6753 962edc7b892e4abd1ef3860099eea1df 248 PIRSF PIRSF000709 3 112 6.1E-4 T 14-10-2018 Amir_6753 962edc7b892e4abd1ef3860099eea1df 248 PIRSF PIRSF000709 135 214 0.074 T 14-10-2018 Amir_6753 962edc7b892e4abd1ef3860099eea1df 248 SMART SM00855 5 190 3.4E-24 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_6753 962edc7b892e4abd1ef3860099eea1df 248 SUPERFAMILY SSF53254 5 222 1.07E-70 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_4142 4de9a0d77d0d002233b7b85798bb2ac9 272 SUPERFAMILY SSF81606 17 271 3.14E-9 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_4142 4de9a0d77d0d002233b7b85798bb2ac9 272 Gene3D G3DSA:3.60.40.10 10 272 1.3E-5 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_6554 945a6b2e2b480c68a98a3a60263ca245 159 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 4 125 1.9E-29 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Amir_6554 945a6b2e2b480c68a98a3a60263ca245 159 Gene3D G3DSA:3.40.50.300 1 140 4.2E-31 T 14-10-2018 Amir_6554 945a6b2e2b480c68a98a3a60263ca245 159 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 5 132 1.0E-21 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Amir_6554 945a6b2e2b480c68a98a3a60263ca245 159 SUPERFAMILY SSF52540 19 122 2.04E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2642 9afe37e4786346cbe734fef1d182f2ff 165 Gene3D G3DSA:3.40.1000.10 9 162 4.7E-7 T 14-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Amir_1776 52072baf1999805fd103471e9adc1ad3 131 PRINTS PR00421 Thioredoxin family signature 68 79 9.1E-8 T 14-10-2018 Amir_1776 52072baf1999805fd103471e9adc1ad3 131 PRINTS PR00421 Thioredoxin family signature 21 29 9.1E-8 T 14-10-2018 Amir_1776 52072baf1999805fd103471e9adc1ad3 131 PRINTS PR00421 Thioredoxin family signature 29 38 9.1E-8 T 14-10-2018 Amir_1776 52072baf1999805fd103471e9adc1ad3 131 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Amir_1776 52072baf1999805fd103471e9adc1ad3 131 Gene3D G3DSA:3.40.30.10 1 120 1.2E-33 T 14-10-2018 Amir_1776 52072baf1999805fd103471e9adc1ad3 131 Pfam PF00085 Thioredoxin 4 102 4.0E-29 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 Amir_1776 52072baf1999805fd103471e9adc1ad3 131 SUPERFAMILY SSF52833 4 103 4.68E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_1776 52072baf1999805fd103471e9adc1ad3 131 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 102 2.1E-32 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Amir_1441 ce4c486e75afa6bb3d42ffba07ffe6f8 243 SUPERFAMILY SSF53213 118 235 7.19E-9 T 14-10-2018 Amir_1441 ce4c486e75afa6bb3d42ffba07ffe6f8 243 Gene3D G3DSA:3.40.830.10 96 237 1.3E-21 T 14-10-2018 Amir_1092 884da3bf415f3a654809bfbc9d3617eb 495 SUPERFAMILY SSF55154 5 208 7.85E-43 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 Amir_1092 884da3bf415f3a654809bfbc9d3617eb 495 Pfam PF01928 CYTH domain 6 194 2.6E-12 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Amir_1092 884da3bf415f3a654809bfbc9d3617eb 495 SMART SM01118 5 204 8.0E-13 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Amir_1092 884da3bf415f3a654809bfbc9d3617eb 495 Gene3D G3DSA:2.40.320.10 5 201 1.4E-11 T 14-10-2018 Amir_1092 884da3bf415f3a654809bfbc9d3617eb 495 Gene3D G3DSA:1.40.20.10 212 495 3.0E-67 T 14-10-2018 IPR038186 CHAD domain superfamily Amir_1092 884da3bf415f3a654809bfbc9d3617eb 495 Pfam PF05235 CHAD domain 223 447 1.3E-58 T 14-10-2018 IPR007899 CHAD domain Amir_1092 884da3bf415f3a654809bfbc9d3617eb 495 SMART SM00880 223 480 2.9E-70 T 14-10-2018 IPR007899 CHAD domain Amir_2978 c311c7147ac025fcd4c8fd7d4361fbe7 609 Gene3D G3DSA:3.20.20.300 18 418 8.7E-97 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Amir_2978 c311c7147ac025fcd4c8fd7d4361fbe7 609 SUPERFAMILY SSF52279 436 604 6.54E-21 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Amir_2978 c311c7147ac025fcd4c8fd7d4361fbe7 609 SUPERFAMILY SSF51445 19 434 2.84E-80 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_2978 c311c7147ac025fcd4c8fd7d4361fbe7 609 PRINTS PR00133 Glycosyl hydrolase family 3 signature 309 327 8.2E-10 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_2978 c311c7147ac025fcd4c8fd7d4361fbe7 609 PRINTS PR00133 Glycosyl hydrolase family 3 signature 225 241 8.2E-10 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_2978 c311c7147ac025fcd4c8fd7d4361fbe7 609 PRINTS PR00133 Glycosyl hydrolase family 3 signature 143 162 8.2E-10 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_2978 c311c7147ac025fcd4c8fd7d4361fbe7 609 PRINTS PR00133 Glycosyl hydrolase family 3 signature 189 205 8.2E-10 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_2978 c311c7147ac025fcd4c8fd7d4361fbe7 609 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 91 395 8.1E-40 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_2978 c311c7147ac025fcd4c8fd7d4361fbe7 609 Gene3D G3DSA:3.40.50.1700 453 606 9.6E-12 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Amir_2978 c311c7147ac025fcd4c8fd7d4361fbe7 609 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 462 604 1.5E-9 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 Amir_3086 279c6fcac0ca974717d54aa21eb2a4c9 126 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 1.6E-26 T 14-10-2018 IPR025161 Putative transposase IS4/IS5 family Amir_1943 7949b5701089d9ca9233c83b677c2b6a 55 Pfam PF04149 Domain of unknown function (DUF397) 2 53 1.9E-22 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_1437 436be21fc49030048530f3dfd6c77620 162 Gene3D G3DSA:1.10.10.10 1 81 3.4E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1437 436be21fc49030048530f3dfd6c77620 162 SUPERFAMILY SSF46785 12 118 1.87E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1437 436be21fc49030048530f3dfd6c77620 162 Pfam PF12840 Helix-turn-helix domain 11 61 4.5E-9 T 14-10-2018 Amir_2567 a48dc48e678c70873b6627f156889194 359 SUPERFAMILY SSF56645 11 167 1.69E-11 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amir_2567 a48dc48e678c70873b6627f156889194 359 Gene3D G3DSA:2.40.110.10 81 166 3.3E-7 T 14-10-2018 Amir_4924 c37c22700c20025686bcf4ef4ed35786 671 SUPERFAMILY SSF53474 354 568 4.57E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4116 c18ca25f5a99391682ebb77c6ec16dfd 276 SUPERFAMILY SSF52096 2 242 1.81E-64 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_4116 c18ca25f5a99391682ebb77c6ec16dfd 276 Gene3D G3DSA:3.90.226.10 1 266 1.1E-62 T 14-10-2018 Amir_4116 c18ca25f5a99391682ebb77c6ec16dfd 276 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 235 6.6E-48 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Amir_1721 b6127b192b10b953236e2917471fd453 424 SUPERFAMILY SSF53448 5 231 5.81E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_1721 b6127b192b10b953236e2917471fd453 424 Gene3D G3DSA:3.90.550.10 12 249 1.6E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_1721 b6127b192b10b953236e2917471fd453 424 Pfam PF04138 GtrA-like protein 287 404 1.7E-11 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 Amir_1721 b6127b192b10b953236e2917471fd453 424 Pfam PF00535 Glycosyl transferase family 2 23 190 3.6E-21 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_1141 769aa2af820ddaa90da5d1bd566497e3 160 Pfam PF17174 Domain of unknown function (DUF5130) 18 151 5.9E-37 T 14-10-2018 IPR033437 Protein of unknown function DUF5130 Amir_1141 769aa2af820ddaa90da5d1bd566497e3 160 Gene3D G3DSA:3.10.310.50 43 159 1.9E-6 T 14-10-2018 Amir_6147 8f2124d3870b429d8d3bf124ba691cd7 288 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 28 282 9.8E-74 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Amir_6147 8f2124d3870b429d8d3bf124ba691cd7 288 Gene3D G3DSA:1.10.8.10 6 86 6.9E-14 T 14-10-2018 Amir_6147 8f2124d3870b429d8d3bf124ba691cd7 288 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 22 285 5.9E-46 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Amir_6147 8f2124d3870b429d8d3bf124ba691cd7 288 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 191 197 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Amir_6147 8f2124d3870b429d8d3bf124ba691cd7 288 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 6 286 41.259 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Amir_6147 8f2124d3870b429d8d3bf124ba691cd7 288 Gene3D G3DSA:3.40.50.150 87 288 5.3E-57 T 14-10-2018 Amir_6147 8f2124d3870b429d8d3bf124ba691cd7 288 SUPERFAMILY SSF53335 10 282 3.17E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_6147 8f2124d3870b429d8d3bf124ba691cd7 288 Pfam PF05175 Methyltransferase small domain 99 201 1.2E-12 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Amir_6063 b044c00bdf86969019e9188caa71752f 383 Gene3D G3DSA:3.40.50.150 84 240 5.4E-20 T 14-10-2018 Amir_5716 db205e7b0bf72b5960f48646de4a6e6e 228 Gene3D G3DSA:3.40.50.970 10 226 1.4E-48 T 14-10-2018 Amir_5716 db205e7b0bf72b5960f48646de4a6e6e 228 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 25 209 2.4E-26 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amir_5716 db205e7b0bf72b5960f48646de4a6e6e 228 SUPERFAMILY SSF52518 28 223 1.07E-44 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Amir_2153 cacb58ab24f01f5b8920548e2377407c 152 SUPERFAMILY SSF82607 19 95 4.19E-7 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_2153 cacb58ab24f01f5b8920548e2377407c 152 Gene3D G3DSA:3.30.1310.10 12 114 7.6E-6 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_2153 cacb58ab24f01f5b8920548e2377407c 152 Pfam PF02575 YbaB/EbfC DNA-binding family 19 95 2.4E-8 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_4607 589c78eef50877aac0d5d5178805badc 415 Gene3D G3DSA:3.20.20.80 7 330 9.4E-26 T 14-10-2018 Amir_4607 589c78eef50877aac0d5d5178805badc 415 SUPERFAMILY SSF51445 8 326 1.62E-31 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_4384 76f73d5ad9c581f023bcce1abe9911df 400 SUPERFAMILY SSF48264 9 398 6.94E-94 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4384 76f73d5ad9c581f023bcce1abe9911df 400 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 337 346 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_4384 76f73d5ad9c581f023bcce1abe9911df 400 Gene3D G3DSA:1.10.630.10 1 400 3.1E-134 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4384 76f73d5ad9c581f023bcce1abe9911df 400 Pfam PF00067 Cytochrome P450 268 365 9.3E-17 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4384 76f73d5ad9c581f023bcce1abe9911df 400 Pfam PF00067 Cytochrome P450 181 261 5.1E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4384 76f73d5ad9c581f023bcce1abe9911df 400 PRINTS PR00359 B-class P450 signature 344 355 4.4E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4384 76f73d5ad9c581f023bcce1abe9911df 400 PRINTS PR00359 B-class P450 signature 135 151 4.4E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4384 76f73d5ad9c581f023bcce1abe9911df 400 PRINTS PR00359 B-class P450 signature 268 279 4.4E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4384 76f73d5ad9c581f023bcce1abe9911df 400 PRINTS PR00359 B-class P450 signature 335 344 4.4E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4384 76f73d5ad9c581f023bcce1abe9911df 400 PRINTS PR00359 B-class P450 signature 188 210 4.4E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4384 76f73d5ad9c581f023bcce1abe9911df 400 PRINTS PR00359 B-class P450 signature 314 329 4.4E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4384 76f73d5ad9c581f023bcce1abe9911df 400 PRINTS PR00359 B-class P450 signature 152 167 4.4E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4384 76f73d5ad9c581f023bcce1abe9911df 400 PRINTS PR00359 B-class P450 signature 89 100 4.4E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_4384 76f73d5ad9c581f023bcce1abe9911df 400 PRINTS PR00359 B-class P450 signature 286 313 4.4E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_5897 917e27ed323a4bd0c86b06895d05e872 383 PIRSF PIRSF019574 24 383 1.2E-102 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Amir_5897 917e27ed323a4bd0c86b06895d05e872 383 SUPERFAMILY SSF53850 64 383 4.3E-80 T 14-10-2018 Amir_5897 917e27ed323a4bd0c86b06895d05e872 383 Pfam PF13416 Bacterial extracellular solute-binding protein 84 348 6.4E-36 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_5897 917e27ed323a4bd0c86b06895d05e872 383 Gene3D G3DSA:3.40.190.10 169 379 3.0E-104 T 14-10-2018 Amir_5897 917e27ed323a4bd0c86b06895d05e872 383 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 86 107 2.9E-45 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Amir_5897 917e27ed323a4bd0c86b06895d05e872 383 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 328 354 2.9E-45 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Amir_5897 917e27ed323a4bd0c86b06895d05e872 383 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 113 127 2.9E-45 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Amir_5897 917e27ed323a4bd0c86b06895d05e872 383 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 2.9E-45 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Amir_5897 917e27ed323a4bd0c86b06895d05e872 383 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 283 302 2.9E-45 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Amir_5897 917e27ed323a4bd0c86b06895d05e872 383 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 160 176 2.9E-45 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Amir_5897 917e27ed323a4bd0c86b06895d05e872 383 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 70 86 2.9E-45 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Amir_5897 917e27ed323a4bd0c86b06895d05e872 383 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 129 142 2.9E-45 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Amir_5897 917e27ed323a4bd0c86b06895d05e872 383 Gene3D G3DSA:3.40.190.10 68 350 3.0E-104 T 14-10-2018 Amir_3352 8e3894900dfff50d5b480ed16b45562b 442 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 - T 14-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 Amir_3352 8e3894900dfff50d5b480ed16b45562b 442 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 179 194 - T 14-10-2018 IPR019826 Carboxylesterase type B, active site Amir_3352 8e3894900dfff50d5b480ed16b45562b 442 Gene3D G3DSA:3.40.50.1820 1 442 1.2E-103 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3352 8e3894900dfff50d5b480ed16b45562b 442 Pfam PF00135 Carboxylesterase family 330 426 8.5E-5 T 14-10-2018 IPR002018 Carboxylesterase, type B Amir_3352 8e3894900dfff50d5b480ed16b45562b 442 Pfam PF00135 Carboxylesterase family 6 321 5.0E-70 T 14-10-2018 IPR002018 Carboxylesterase, type B Amir_3352 8e3894900dfff50d5b480ed16b45562b 442 SUPERFAMILY SSF53474 7 441 5.0E-88 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2511 4032df5368f52876ec94f3dc2da5b8b0 385 Pfam PF07728 AAA domain (dynein-related subfamily) 96 238 6.7E-35 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Amir_2511 4032df5368f52876ec94f3dc2da5b8b0 385 Gene3D G3DSA:3.40.50.300 76 251 1.6E-23 T 14-10-2018 Amir_2511 4032df5368f52876ec94f3dc2da5b8b0 385 SUPERFAMILY SSF52540 76 285 3.66E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2511 4032df5368f52876ec94f3dc2da5b8b0 385 SMART SM00382 92 248 5.1E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6113 d704eb50a97e8fcb5f79dadbea1faf7d 208 SMART SM01120 32 204 1.1E-65 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amir_6113 d704eb50a97e8fcb5f79dadbea1faf7d 208 SUPERFAMILY SSF101473 7 204 6.15E-51 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amir_6113 d704eb50a97e8fcb5f79dadbea1faf7d 208 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 12 203 1.8E-64 T 14-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 Amir_6113 d704eb50a97e8fcb5f79dadbea1faf7d 208 Pfam PF02734 DAK2 domain 32 203 5.8E-49 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amir_6113 d704eb50a97e8fcb5f79dadbea1faf7d 208 Gene3D G3DSA:1.25.40.340 3 207 1.4E-56 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amir_6619 ead13fb6f42e17db6e045f9eb22c8743 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.2E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6619 ead13fb6f42e17db6e045f9eb22c8743 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.2E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6619 ead13fb6f42e17db6e045f9eb22c8743 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.2E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6619 ead13fb6f42e17db6e045f9eb22c8743 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.2E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6619 ead13fb6f42e17db6e045f9eb22c8743 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.2E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6619 ead13fb6f42e17db6e045f9eb22c8743 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.2E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6619 ead13fb6f42e17db6e045f9eb22c8743 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.892 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6619 ead13fb6f42e17db6e045f9eb22c8743 124 Gene3D G3DSA:2.40.50.140 1 124 8.2E-64 T 14-10-2018 Amir_6619 ead13fb6f42e17db6e045f9eb22c8743 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6619 ead13fb6f42e17db6e045f9eb22c8743 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 3.3E-68 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6619 ead13fb6f42e17db6e045f9eb22c8743 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.6E-43 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6619 ead13fb6f42e17db6e045f9eb22c8743 124 SUPERFAMILY SSF50249 2 123 1.97E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_6619 ead13fb6f42e17db6e045f9eb22c8743 124 PIRSF PIRSF002133 1 124 1.1E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6042 835f27d08c931c9bf535d61e6f5c6942 335 Gene3D G3DSA:3.20.20.210 72 328 4.9E-19 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Amir_6042 835f27d08c931c9bf535d61e6f5c6942 335 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 11 324 3.1E-17 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Amir_6042 835f27d08c931c9bf535d61e6f5c6942 335 SUPERFAMILY SSF51726 9 328 6.54E-23 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Amir_2729 79ea5b81d2cd63ca3a2732f1453cf20f 515 Pfam PF08386 TAP-like protein 395 487 1.6E-18 T 14-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal Amir_2729 79ea5b81d2cd63ca3a2732f1453cf20f 515 Pfam PF00561 alpha/beta hydrolase fold 89 283 2.8E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_2729 79ea5b81d2cd63ca3a2732f1453cf20f 515 SUPERFAMILY SSF53474 74 459 4.4E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3810 1ecd173383cd7149583ebdbb8373f9f1 361 SUPERFAMILY SSF48576 50 360 1.08E-67 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_3810 1ecd173383cd7149583ebdbb8373f9f1 361 Pfam PF00348 Polyprenyl synthetase 51 310 2.5E-45 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Amir_3810 1ecd173383cd7149583ebdbb8373f9f1 361 Gene3D G3DSA:1.10.600.10 4 361 4.6E-104 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_3810 1ecd173383cd7149583ebdbb8373f9f1 361 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 238 250 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Amir_3810 1ecd173383cd7149583ebdbb8373f9f1 361 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 94 108 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Amir_4388 f122f947338fa0547c47bcfb82cca1cf 147 Gene3D G3DSA:1.10.3680.10 22 146 6.7E-7 T 14-10-2018 IPR029024 TerB-like Amir_4388 f122f947338fa0547c47bcfb82cca1cf 147 SUPERFAMILY SSF158682 25 145 5.89E-5 T 14-10-2018 IPR029024 TerB-like Amir_2867 755ccfb0044c2278c0b06d380d08b301 231 Pfam PF02575 YbaB/EbfC DNA-binding family 107 183 9.9E-8 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_2867 755ccfb0044c2278c0b06d380d08b301 231 SUPERFAMILY SSF82607 107 183 9.42E-6 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_0014 c7d2ed3cc6b80ff4f928e1465951cf39 298 SUPERFAMILY SSF144091 83 266 4.97E-41 T 14-10-2018 Amir_0014 c7d2ed3cc6b80ff4f928e1465951cf39 298 Gene3D G3DSA:1.20.1540.10 79 266 4.8E-36 T 14-10-2018 IPR035952 Rhomboid-like superfamily Amir_0014 c7d2ed3cc6b80ff4f928e1465951cf39 298 Pfam PF01694 Rhomboid family 130 262 1.6E-32 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Amir_5747 96208c10387066347cd15b8a58d1986a 254 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 32 189 15.008 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amir_5747 96208c10387066347cd15b8a58d1986a 254 TIGRFAM TIGR00077 lspA: signal peptidase II 34 186 1.2E-25 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amir_5747 96208c10387066347cd15b8a58d1986a 254 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 79 87 7.9E-16 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amir_5747 96208c10387066347cd15b8a58d1986a 254 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 164 180 7.9E-16 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amir_5747 96208c10387066347cd15b8a58d1986a 254 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 121 136 7.9E-16 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amir_5747 96208c10387066347cd15b8a58d1986a 254 Pfam PF01252 Signal peptidase (SPase) II 40 183 3.2E-30 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amir_5164 cfeb54dfcf52038a6e2a86bcabf2daa1 276 Pfam PF02575 YbaB/EbfC DNA-binding family 3 85 1.1E-7 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_5164 cfeb54dfcf52038a6e2a86bcabf2daa1 276 SUPERFAMILY SSF82607 9 83 4.84E-5 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_6397 a04512bdaddc3f38d9e8587fe87f724b 128 Pfam PF08044 Domain of unknown function (DUF1707) 6 58 2.3E-20 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 Amir_1501 7faaef224ee124ff5021eaff6758be62 431 Pfam PF03631 Virulence factor BrkB 36 296 2.2E-40 T 14-10-2018 IPR017039 Virulence factor BrkB Amir_3655 7f9fe42e0e3be858f8473e0c4d71ea1c 711 Gene3D G3DSA:3.40.50.280 163 254 2.7E-6 T 14-10-2018 Amir_3655 7f9fe42e0e3be858f8473e0c4d71ea1c 711 SUPERFAMILY SSF102114 310 517 6.57E-10 T 14-10-2018 Amir_3655 7f9fe42e0e3be858f8473e0c4d71ea1c 711 SUPERFAMILY SSF52242 169 235 4.32E-6 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amir_3655 7f9fe42e0e3be858f8473e0c4d71ea1c 711 Pfam PF02310 B12 binding domain 155 255 6.6E-8 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amir_6996 3274d16b5178a2deedfd2a8c56d96359 500 SUPERFAMILY SSF53182 251 496 1.31E-21 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 Amir_2055 d0026154f20e497576b0ca0e5d49f9f6 303 SUPERFAMILY SSF161098 23 300 1.96E-27 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2055 d0026154f20e497576b0ca0e5d49f9f6 303 Gene3D G3DSA:1.10.3720.10 20 301 5.3E-27 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1704 d32d483dac1ea0d170e0c060c0a2f97c 287 Pfam PF01564 Spermine/spermidine synthase domain 54 182 3.4E-8 T 14-10-2018 Amir_1704 d32d483dac1ea0d170e0c060c0a2f97c 287 Gene3D G3DSA:3.40.50.150 10 274 4.6E-75 T 14-10-2018 Amir_1704 d32d483dac1ea0d170e0c060c0a2f97c 287 SUPERFAMILY SSF53335 10 240 2.7E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_2691 64590f3298ce4928502beac520c3bdcd 419 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 226 239 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Amir_2691 64590f3298ce4928502beac520c3bdcd 419 SUPERFAMILY SSF53383 6 374 1.09E-61 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_2691 64590f3298ce4928502beac520c3bdcd 419 Gene3D G3DSA:3.90.1150.10 20 377 1.8E-65 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_2691 64590f3298ce4928502beac520c3bdcd 419 Gene3D G3DSA:3.40.640.10 54 281 1.8E-65 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_2691 64590f3298ce4928502beac520c3bdcd 419 Pfam PF00155 Aminotransferase class I and II 38 374 1.5E-35 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_4018 db0c18e742a4970747c0d86d2aa88aae 213 SUPERFAMILY SSF51735 2 210 1.1E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4018 db0c18e742a4970747c0d86d2aa88aae 213 Pfam PF13460 NAD(P)H-binding 7 198 1.6E-29 T 14-10-2018 IPR016040 NAD(P)-binding domain Amir_4018 db0c18e742a4970747c0d86d2aa88aae 213 Gene3D G3DSA:3.40.50.720 1 209 8.7E-30 T 14-10-2018 Amir_1422 37e29ce651973dd8c3157abf4f1f6ab1 212 SUPERFAMILY SSF51569 9 210 2.2E-64 T 14-10-2018 Amir_1422 37e29ce651973dd8c3157abf4f1f6ab1 212 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 129 142 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Amir_1422 37e29ce651973dd8c3157abf4f1f6ab1 212 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 41 50 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Amir_1422 37e29ce651973dd8c3157abf4f1f6ab1 212 Gene3D G3DSA:3.20.20.70 1 212 1.0E-71 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_1422 37e29ce651973dd8c3157abf4f1f6ab1 212 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 11 210 2.9E-72 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Amir_1422 37e29ce651973dd8c3157abf4f1f6ab1 212 Pfam PF01081 KDPG and KHG aldolase 13 203 2.8E-65 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Amir_4237 1efbd612cca19116cd1362351ac3a5bb 233 SUPERFAMILY SSF49899 44 233 3.27E-76 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_4237 1efbd612cca19116cd1362351ac3a5bb 233 PRINTS PR00911 Glycosyl hydrolase family 11 signature 126 136 3.7E-17 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_4237 1efbd612cca19116cd1362351ac3a5bb 233 PRINTS PR00911 Glycosyl hydrolase family 11 signature 201 209 3.7E-17 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_4237 1efbd612cca19116cd1362351ac3a5bb 233 PRINTS PR00911 Glycosyl hydrolase family 11 signature 152 158 3.7E-17 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_4237 1efbd612cca19116cd1362351ac3a5bb 233 PRINTS PR00911 Glycosyl hydrolase family 11 signature 116 125 3.7E-17 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_4237 1efbd612cca19116cd1362351ac3a5bb 233 PRINTS PR00911 Glycosyl hydrolase family 11 signature 178 187 3.7E-17 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_4237 1efbd612cca19116cd1362351ac3a5bb 233 PRINTS PR00911 Glycosyl hydrolase family 11 signature 173 178 3.7E-17 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_4237 1efbd612cca19116cd1362351ac3a5bb 233 ProSitePatterns PS00777 Glycosyl hydrolases family 11 (GH11) active site signature 2. 217 228 - T 14-10-2018 IPR033119 Glycoside hydrolase family 11, active site 2 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_4237 1efbd612cca19116cd1362351ac3a5bb 233 Gene3D G3DSA:2.60.120.180 40 233 3.6E-80 T 14-10-2018 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_4237 1efbd612cca19116cd1362351ac3a5bb 233 Pfam PF00457 Glycosyl hydrolases family 11 54 231 4.2E-72 T 14-10-2018 IPR033123 Glycosyl hydrolases family 11 (GH11) domain MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_4237 1efbd612cca19116cd1362351ac3a5bb 233 ProSitePatterns PS00776 Glycosyl hydrolases family 11 (GH11) active site signature 1. 126 136 - T 14-10-2018 IPR018208 Glycoside hydrolase family 11, active site 1 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_0923 abb271c56eba416661c30236483c9256 62 Pfam PF12728 Helix-turn-helix domain 10 55 3.3E-8 T 14-10-2018 Amir_0923 abb271c56eba416661c30236483c9256 62 SUPERFAMILY SSF46955 7 55 1.88E-8 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_0923 abb271c56eba416661c30236483c9256 62 Gene3D G3DSA:1.10.1660.10 1 57 2.5E-5 T 14-10-2018 Amir_3300 82dcc8dbf2252c0840475dc733aef08e 332 Gene3D G3DSA:2.130.10.10 40 319 6.0E-11 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_3300 82dcc8dbf2252c0840475dc733aef08e 332 SUPERFAMILY SSF101898 47 312 3.4E-22 T 14-10-2018 Amir_6167 7026574ee21f4e9ec39e953549eb040e 289 Gene3D G3DSA:3.40.50.1820 2 289 4.7E-73 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6167 7026574ee21f4e9ec39e953549eb040e 289 Pfam PF00561 alpha/beta hydrolase fold 29 139 6.3E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_6167 7026574ee21f4e9ec39e953549eb040e 289 SUPERFAMILY SSF53474 3 289 6.84E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4021 c7f3a37548c896a83587e95f0bf878f9 403 Gene3D G3DSA:3.20.20.300 79 403 3.7E-97 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Amir_4021 c7f3a37548c896a83587e95f0bf878f9 403 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 89 398 2.2E-70 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4021 c7f3a37548c896a83587e95f0bf878f9 403 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 317 334 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 Amir_4021 c7f3a37548c896a83587e95f0bf878f9 403 SUPERFAMILY SSF51445 134 401 4.84E-63 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_0326 ee064d6110e315454a01adb8b11a7379 156 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 114 3.0E-39 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Amir_0326 ee064d6110e315454a01adb8b11a7379 156 SUPERFAMILY SSF50692 1 116 1.08E-49 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Amir_0326 ee064d6110e315454a01adb8b11a7379 156 Gene3D G3DSA:2.40.40.20 1 124 3.2E-54 T 14-10-2018 Amir_0326 ee064d6110e315454a01adb8b11a7379 156 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 118 1.5E-53 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Amir_0326 ee064d6110e315454a01adb8b11a7379 156 Pfam PF02261 Aspartate decarboxylase 1 114 1.4E-52 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Amir_0326 ee064d6110e315454a01adb8b11a7379 156 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 130 76.258 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Amir_1347 5a76e1e9ea6bcbcc494296ce1bbe7721 275 Gene3D G3DSA:3.90.25.10 122 256 4.0E-50 T 14-10-2018 Amir_1347 5a76e1e9ea6bcbcc494296ce1bbe7721 275 Gene3D G3DSA:3.40.50.720 4 254 4.0E-50 T 14-10-2018 Amir_1347 5a76e1e9ea6bcbcc494296ce1bbe7721 275 SUPERFAMILY SSF51735 3 243 1.15E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2775 2d3f4204c1ec60e1c779af7df0bb5783 183 Pfam PF13527 Acetyltransferase (GNAT) domain 8 139 3.9E-7 T 14-10-2018 Amir_2775 2d3f4204c1ec60e1c779af7df0bb5783 183 Gene3D G3DSA:3.40.630.30 2 183 1.7E-43 T 14-10-2018 Amir_2775 2d3f4204c1ec60e1c779af7df0bb5783 183 SUPERFAMILY SSF55729 8 167 6.97E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_6913 18781a2724b4d79ff298bb9e7b681fe8 87 Gene3D G3DSA:3.40.630.30 1 79 1.5E-11 T 14-10-2018 Amir_6913 18781a2724b4d79ff298bb9e7b681fe8 87 Pfam PF13673 Acetyltransferase (GNAT) domain 22 73 1.5E-7 T 14-10-2018 IPR000182 GNAT domain Amir_6913 18781a2724b4d79ff298bb9e7b681fe8 87 SUPERFAMILY SSF55729 19 73 3.37E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_1345 ebfca98f17bf25afd06f61ce9a4017e0 282 SMART SM00530 9 81 8.5E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_1345 ebfca98f17bf25afd06f61ce9a4017e0 282 Pfam PF13560 Helix-turn-helix domain 5 84 1.6E-17 T 14-10-2018 Amir_1345 ebfca98f17bf25afd06f61ce9a4017e0 282 Gene3D G3DSA:1.10.260.40 12 93 1.4E-6 T 14-10-2018 Amir_1345 ebfca98f17bf25afd06f61ce9a4017e0 282 SUPERFAMILY SSF47413 34 77 1.03E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1708 7c6eb8860d8f55a98ca0e7abad2b1553 125 SUPERFAMILY SSF54427 6 118 3.38E-6 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_1708 7c6eb8860d8f55a98ca0e7abad2b1553 125 Gene3D G3DSA:3.10.450.50 4 121 1.1E-6 T 14-10-2018 Amir_0497 c42f1fd34267dd3b7f7bee2505848ebe 216 ProDom PD053583 TRANSMEMBRANE MEMBRANE PRECURSOR SIGNAL MB0906 RV0882/MT0905 131 195 0.002 T 14-10-2018 IPR024244 Protein of unknown function DUF2537 Amir_0497 c42f1fd34267dd3b7f7bee2505848ebe 216 Pfam PF10801 Protein of unknown function (DUF2537) 134 212 1.2E-27 T 14-10-2018 IPR024244 Protein of unknown function DUF2537 Amir_4773 6c823f22000fa6f49dcccdeb26dbd634 377 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 10 209 5.5E-58 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Amir_4773 6c823f22000fa6f49dcccdeb26dbd634 377 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 255 341 6.0E-22 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Amir_4773 6c823f22000fa6f49dcccdeb26dbd634 377 SMART SM00833 255 344 2.0E-28 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Amir_4773 6c823f22000fa6f49dcccdeb26dbd634 377 SUPERFAMILY SSF52540 6 310 5.05E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4773 6c823f22000fa6f49dcccdeb26dbd634 377 Gene3D G3DSA:3.40.50.300 7 228 4.7E-73 T 14-10-2018 Amir_6936 443f9ae552b1de3ef13e5f210b03a607 184 Gene3D G3DSA:3.40.50.2020 3 184 1.1E-46 T 14-10-2018 Amir_6936 443f9ae552b1de3ef13e5f210b03a607 184 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 184 23.385 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amir_6936 443f9ae552b1de3ef13e5f210b03a607 184 SUPERFAMILY SSF53271 10 181 2.23E-31 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Amir_6936 443f9ae552b1de3ef13e5f210b03a607 184 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 17 181 1.0E-34 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amir_6936 443f9ae552b1de3ef13e5f210b03a607 184 Pfam PF00156 Phosphoribosyl transferase domain 103 164 2.3E-10 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Amir_5980 7052add9eb1dd4480af543507c4ecb7d 292 SUPERFAMILY SSF51735 2 276 1.55E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5980 7052add9eb1dd4480af543507c4ecb7d 292 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 215 4.1E-18 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_5980 7052add9eb1dd4480af543507c4ecb7d 292 Gene3D G3DSA:3.40.50.720 1 288 1.0E-49 T 14-10-2018 Amir_2858 fc146a2c6be4b57883a432847eae11d8 465 SUPERFAMILY SSF103473 6 398 6.02E-33 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2858 fc146a2c6be4b57883a432847eae11d8 465 Pfam PF07690 Major Facilitator Superfamily 19 273 4.8E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2858 fc146a2c6be4b57883a432847eae11d8 465 Gene3D G3DSA:1.20.1250.20 3 397 5.3E-32 T 14-10-2018 Amir_5150 29d95c2a57668b8d36fd0b2fcb2d312f 425 Gene3D G3DSA:3.90.1150.10 13 414 5.7E-167 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_5150 29d95c2a57668b8d36fd0b2fcb2d312f 425 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 13 423 7.9E-170 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Amir_5150 29d95c2a57668b8d36fd0b2fcb2d312f 425 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 232 251 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Amir_5150 29d95c2a57668b8d36fd0b2fcb2d312f 425 SUPERFAMILY SSF53383 9 418 1.21E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_5150 29d95c2a57668b8d36fd0b2fcb2d312f 425 Pfam PF00266 Aminotransferase class-V 31 411 1.3E-134 T 14-10-2018 IPR000192 Aminotransferase class V domain Amir_5150 29d95c2a57668b8d36fd0b2fcb2d312f 425 Gene3D G3DSA:3.40.640.10 42 311 5.7E-167 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_4870 7d78f9ba051b98ec91fa338d8dc57f23 1147 SMART SM00560 990 1135 2.0E-7 T 14-10-2018 IPR006558 LamG-like jellyroll fold Amir_4870 7d78f9ba051b98ec91fa338d8dc57f23 1147 SMART SM00560 773 911 1.1E-17 T 14-10-2018 IPR006558 LamG-like jellyroll fold Amir_4870 7d78f9ba051b98ec91fa338d8dc57f23 1147 SUPERFAMILY SSF49899 927 1143 8.87E-25 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_4870 7d78f9ba051b98ec91fa338d8dc57f23 1147 ProDom PD039135 WALL-ASSOCIATED REPEAT PROTEIN CELL WALL HYDROLASE PRECURSOR SIGNAL TRANSMEMBRANE RETICULOCYTE 63 250 2.0E-5 T 14-10-2018 Amir_4870 7d78f9ba051b98ec91fa338d8dc57f23 1147 Gene3D G3DSA:2.60.120.200 711 916 7.3E-34 T 14-10-2018 Amir_4870 7d78f9ba051b98ec91fa338d8dc57f23 1147 Gene3D G3DSA:2.60.120.200 921 1143 2.5E-23 T 14-10-2018 Amir_4870 7d78f9ba051b98ec91fa338d8dc57f23 1147 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 756 914 8.2E-28 T 14-10-2018 Amir_4870 7d78f9ba051b98ec91fa338d8dc57f23 1147 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 982 1138 2.5E-22 T 14-10-2018 Amir_4870 7d78f9ba051b98ec91fa338d8dc57f23 1147 SUPERFAMILY SSF49899 705 919 2.72E-34 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_1056 60422aba17853e9867284abb718b6fce 208 Pfam PF00929 Exonuclease 5 168 8.3E-33 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Amir_1056 60422aba17853e9867284abb718b6fce 208 Hamap MF_00045 Oligoribonuclease [orn]. 1 179 37.776 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 Amir_1056 60422aba17853e9867284abb718b6fce 208 SMART SM00479 3 178 1.6E-30 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Amir_1056 60422aba17853e9867284abb718b6fce 208 SUPERFAMILY SSF53098 3 177 4.35E-43 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_1056 60422aba17853e9867284abb718b6fce 208 Gene3D G3DSA:3.30.420.10 1 180 1.3E-68 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amir_4523 edfff152e66c9f8abe9fc29c89ce0eed 139 Gene3D G3DSA:2.40.128.270 38 137 2.7E-17 T 14-10-2018 IPR038670 HslJ-like superfamily Amir_4523 edfff152e66c9f8abe9fc29c89ce0eed 139 Pfam PF03724 META domain 52 135 4.8E-21 T 14-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ Amir_4233 5f0f02c6be8978b83cdbd2b35fe3ca8e 143 SUPERFAMILY SSF50475 9 139 1.43E-32 T 14-10-2018 Amir_4233 5f0f02c6be8978b83cdbd2b35fe3ca8e 143 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 9 87 5.2E-13 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amir_4233 5f0f02c6be8978b83cdbd2b35fe3ca8e 143 TIGRFAM TIGR03618 Rv1155_F420: PPOX class probable F420-dependent enzyme 9 139 1.9E-41 T 14-10-2018 IPR019920 F420-binding domain, putative Amir_4233 5f0f02c6be8978b83cdbd2b35fe3ca8e 143 Gene3D G3DSA:2.30.110.10 8 143 8.6E-42 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_1025 c398baee7943be2953b33ac5c9ef0aee 340 SUPERFAMILY SSF51679 8 327 2.62E-79 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_1025 c398baee7943be2953b33ac5c9ef0aee 340 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 327 4.1E-132 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 Amir_1025 c398baee7943be2953b33ac5c9ef0aee 340 Gene3D G3DSA:3.20.20.30 4 331 5.1E-105 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_1025 c398baee7943be2953b33ac5c9ef0aee 340 Pfam PF00296 Luciferase-like monooxygenase 23 304 7.2E-36 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_6537 fc52a4a091766476aec9d3ab74be9fc0 306 Pfam PF16751 Anti-sigma-D factor RsdA to sigma factor binding region 34 79 2.0E-10 T 14-10-2018 IPR031928 Anti-sigma-D factor RsdA, sigma factor binding region Amir_0811 6c21bcfbb496619fedfa45ba16e184b3 296 Gene3D G3DSA:3.40.50.720 2 278 7.9E-67 T 14-10-2018 Amir_0811 6c21bcfbb496619fedfa45ba16e184b3 296 SUPERFAMILY SSF51735 3 249 6.53E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0811 6c21bcfbb496619fedfa45ba16e184b3 296 Pfam PF00106 short chain dehydrogenase 7 186 3.7E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0811 6c21bcfbb496619fedfa45ba16e184b3 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0811 6c21bcfbb496619fedfa45ba16e184b3 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0811 6c21bcfbb496619fedfa45ba16e184b3 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0811 6c21bcfbb496619fedfa45ba16e184b3 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 8.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0811 6c21bcfbb496619fedfa45ba16e184b3 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 8.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0811 6c21bcfbb496619fedfa45ba16e184b3 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0811 6c21bcfbb496619fedfa45ba16e184b3 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0811 6c21bcfbb496619fedfa45ba16e184b3 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0811 6c21bcfbb496619fedfa45ba16e184b3 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 8.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5730 4f6cd97d9e90d59e562c158da5416c30 339 Gene3D G3DSA:3.40.50.10800 106 331 1.6E-110 T 14-10-2018 Amir_5730 4f6cd97d9e90d59e562c158da5416c30 339 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 23 332 9.1E-91 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Amir_5730 4f6cd97d9e90d59e562c158da5416c30 339 SUPERFAMILY SSF142754 23 332 5.89E-101 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Amir_5730 4f6cd97d9e90d59e562c158da5416c30 339 Gene3D G3DSA:3.40.50.10800 191 288 1.6E-110 T 14-10-2018 Amir_5730 4f6cd97d9e90d59e562c158da5416c30 339 Gene3D G3DSA:3.40.50.10800 26 313 1.6E-110 T 14-10-2018 Amir_5730 4f6cd97d9e90d59e562c158da5416c30 339 Pfam PF02445 Quinolinate synthetase A protein 27 331 6.5E-110 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Amir_2524 f00057ebcef15674a018375be2dbb399 161 ProSitePatterns PS01117 MarR-type HTH domain signature. 71 105 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Amir_2524 f00057ebcef15674a018375be2dbb399 161 Pfam PF01047 MarR family 43 96 1.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2524 f00057ebcef15674a018375be2dbb399 161 Gene3D G3DSA:1.10.10.10 2 147 4.5E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2524 f00057ebcef15674a018375be2dbb399 161 SUPERFAMILY SSF46785 42 144 1.27E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_2524 f00057ebcef15674a018375be2dbb399 161 SMART SM00347 32 132 5.3E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_6655 0f4278139406701a0ebdce9dc25488c7 286 Hamap MF_00188 Protease HtpX [htpX]. 7 282 27.048 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 Amir_6655 0f4278139406701a0ebdce9dc25488c7 286 Gene3D G3DSA:3.30.2010.10 60 150 1.4E-28 T 14-10-2018 Amir_6655 0f4278139406701a0ebdce9dc25488c7 286 Pfam PF01435 Peptidase family M48 68 282 3.1E-36 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Amir_3668 ea6ef81470bf5b06ba378e0cf9fb618b 317 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 91 242 1.3E-44 T 14-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 Amir_3668 ea6ef81470bf5b06ba378e0cf9fb618b 317 Gene3D G3DSA:2.60.120.330 66 254 1.4E-57 T 14-10-2018 IPR027443 Isopenicillin N synthase-like Amir_3668 ea6ef81470bf5b06ba378e0cf9fb618b 317 SUPERFAMILY SSF51197 95 267 1.15E-19 T 14-10-2018 Amir_2041 47f1f90b413806e65d27d286e177c0a5 397 SUPERFAMILY SSF103473 9 391 6.54E-59 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2041 47f1f90b413806e65d27d286e177c0a5 397 Gene3D G3DSA:1.20.1250.20 4 191 9.8E-40 T 14-10-2018 Amir_2041 47f1f90b413806e65d27d286e177c0a5 397 Pfam PF07690 Major Facilitator Superfamily 20 354 1.0E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2041 47f1f90b413806e65d27d286e177c0a5 397 Gene3D G3DSA:1.20.1250.20 201 395 4.6E-43 T 14-10-2018 Amir_5174 3a3a6d49f0a00cac3bc5dd5cb3195bac 525 Gene3D G3DSA:1.20.1730.10 24 511 1.9E-54 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Amir_5174 3a3a6d49f0a00cac3bc5dd5cb3195bac 525 Pfam PF00474 Sodium:solute symporter family 36 445 4.1E-86 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Amir_4325 e4a74d35dc8f68e57c69f74dda4ee222 136 Gene3D G3DSA:3.30.350.10 35 136 3.7E-21 T 14-10-2018 IPR036819 Subtilisin inhibitor-like superfamily GO:0004867 Amir_4325 e4a74d35dc8f68e57c69f74dda4ee222 136 ProDom PD004028 INHIBITOR PROTEASE SERINE DIRECT SEQUENCING SUBTILISIN PRECURSOR SIGNAL INHIBITOR-LIKE INHIBITOR 44 124 2.0E-8 T 14-10-2018 IPR023549 Subtilisin inhibitor GO:0004867 Amir_4325 e4a74d35dc8f68e57c69f74dda4ee222 136 SUPERFAMILY SSF55399 43 136 1.57E-16 T 14-10-2018 IPR036819 Subtilisin inhibitor-like superfamily GO:0004867 Amir_4325 e4a74d35dc8f68e57c69f74dda4ee222 136 Pfam PF00720 Subtilisin inhibitor-like 40 120 2.6E-11 T 14-10-2018 IPR023549 Subtilisin inhibitor GO:0004867 Amir_4325 e4a74d35dc8f68e57c69f74dda4ee222 136 PRINTS PR00294 Streptomyces subtilisin inhibitor signature 60 87 2.2E-6 T 14-10-2018 IPR000691 Proteinase inhibitor I16, Streptomyces subtilisin-type inhibitor GO:0004867 Amir_4325 e4a74d35dc8f68e57c69f74dda4ee222 136 PRINTS PR00294 Streptomyces subtilisin inhibitor signature 111 127 2.2E-6 T 14-10-2018 IPR000691 Proteinase inhibitor I16, Streptomyces subtilisin-type inhibitor GO:0004867 Amir_5509 09591aaa6c82e12e24f41d940c8e44e4 195 Pfam PF00583 Acetyltransferase (GNAT) family 56 149 3.0E-9 T 14-10-2018 IPR000182 GNAT domain Amir_5509 09591aaa6c82e12e24f41d940c8e44e4 195 SUPERFAMILY SSF55729 4 175 5.15E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_5509 09591aaa6c82e12e24f41d940c8e44e4 195 Gene3D G3DSA:3.40.630.30 4 173 9.6E-35 T 14-10-2018 Amir_3436 29a16cc2d23975c3986f6ea3568d1087 225 SUPERFAMILY SSF53474 14 210 8.04E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3436 29a16cc2d23975c3986f6ea3568d1087 225 Gene3D G3DSA:3.40.50.1820 23 225 4.8E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2032 8f9380d512d4d4272a511fd4ff166f99 112 Gene3D G3DSA:2.10.109.10 2 112 5.1E-15 T 14-10-2018 Amir_2032 8f9380d512d4d4272a511fd4ff166f99 112 ProSitePatterns PS00501 Signal peptidases I serine active site. 11 18 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 Amir_2032 8f9380d512d4d4272a511fd4ff166f99 112 SUPERFAMILY SSF51306 3 109 4.19E-22 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Amir_2032 8f9380d512d4d4272a511fd4ff166f99 112 Pfam PF00717 Peptidase S24-like 8 61 1.8E-10 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Amir_2032 8f9380d512d4d4272a511fd4ff166f99 112 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 51 63 1.3E-5 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amir_2032 8f9380d512d4d4272a511fd4ff166f99 112 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 77 96 1.3E-5 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amir_2032 8f9380d512d4d4272a511fd4ff166f99 112 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 2 18 1.3E-5 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amir_3084 84917a9ec6b8779b94e3baa28929390c 217 Gene3D G3DSA:3.30.1310.10 2 115 2.9E-6 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_3084 84917a9ec6b8779b94e3baa28929390c 217 SUPERFAMILY SSF82607 27 105 6.8E-8 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_3084 84917a9ec6b8779b94e3baa28929390c 217 Pfam PF02575 YbaB/EbfC DNA-binding family 25 105 7.5E-10 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_1780 a399de011af4224189791f602dc01e70 241 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 5 237 6.7E-40 T 14-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 Amir_1780 a399de011af4224189791f602dc01e70 241 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 7 236 5.9E-63 T 14-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 Amir_1806 ea7e8bef465897df3680aabc5a07245d 275 SUPERFAMILY SSF81298 11 62 9.02E-5 T 14-10-2018 IPR035099 Anthrax toxin, edema factor, C-terminal KEGG: 00230+4.6.1.1 Amir_5046 3210fc5d6ef62f7dde584a8e56494173 193 SUPERFAMILY SSF48498 81 191 1.01E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_5046 3210fc5d6ef62f7dde584a8e56494173 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 61 1.7E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5046 3210fc5d6ef62f7dde584a8e56494173 193 Gene3D G3DSA:1.10.357.10 7 192 1.6E-45 T 14-10-2018 Amir_5046 3210fc5d6ef62f7dde584a8e56494173 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5046 3210fc5d6ef62f7dde584a8e56494173 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5046 3210fc5d6ef62f7dde584a8e56494173 193 SUPERFAMILY SSF46689 2 81 2.1E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0895 b1d8097148639bd228b2077fc43ce7b5 456 SMART SM00560 322 444 1.5E-4 T 14-10-2018 IPR006558 LamG-like jellyroll fold Amir_0895 b1d8097148639bd228b2077fc43ce7b5 456 SUPERFAMILY SSF49899 263 452 1.9E-24 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_0895 b1d8097148639bd228b2077fc43ce7b5 456 Gene3D G3DSA:2.60.120.200 259 454 8.2E-27 T 14-10-2018 Amir_0895 b1d8097148639bd228b2077fc43ce7b5 456 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 306 446 8.8E-18 T 14-10-2018 Amir_2269 087876c8c4864b6ceb921638ff5f13ba 293 SUPERFAMILY SSF103481 192 285 9.94E-11 T 14-10-2018 Amir_2269 087876c8c4864b6ceb921638ff5f13ba 293 Pfam PF00892 EamA-like transporter family 147 279 2.6E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amir_3087 4bf7b74fb5cd94c79fd331b374fd9fef 140 SUPERFAMILY SSF55298 12 137 7.7E-27 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_3087 4bf7b74fb5cd94c79fd331b374fd9fef 140 Pfam PF01042 Endoribonuclease L-PSP 17 137 1.7E-19 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Amir_3087 4bf7b74fb5cd94c79fd331b374fd9fef 140 Gene3D G3DSA:3.30.1330.40 13 139 4.4E-27 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_4639 96990e6f5e201e2748bfcc499917a22b 441 Gene3D G3DSA:1.20.1740.10 6 436 2.8E-72 T 14-10-2018 Amir_4639 96990e6f5e201e2748bfcc499917a22b 441 Pfam PF13520 Amino acid permease 10 400 2.8E-37 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amir_4639 96990e6f5e201e2748bfcc499917a22b 441 PIRSF PIRSF006060 1 430 7.7E-58 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amir_2687 c6ff6662134b5f2ce3facc7ac4b6f63e 82 Gene3D G3DSA:1.10.1200.10 1 81 4.6E-26 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2687 c6ff6662134b5f2ce3facc7ac4b6f63e 82 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Amir_2687 c6ff6662134b5f2ce3facc7ac4b6f63e 82 SUPERFAMILY SSF47336 5 79 1.83E-15 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2687 c6ff6662134b5f2ce3facc7ac4b6f63e 82 Pfam PF00550 Phosphopantetheine attachment site 19 70 2.2E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3029 9346d4b1abbdb8294f170d6bbf069572 98 SUPERFAMILY SSF52540 36 76 2.96E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3029 9346d4b1abbdb8294f170d6bbf069572 98 Gene3D G3DSA:3.40.50.300 32 92 1.3E-5 T 14-10-2018 Amir_6958 3f019eccd87d8ea0e551c5b2eaf91cc9 371 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 335 368 0.0012 T 14-10-2018 Amir_6958 3f019eccd87d8ea0e551c5b2eaf91cc9 371 Gene3D G3DSA:2.60.40.10 34 160 9.5E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_6958 3f019eccd87d8ea0e551c5b2eaf91cc9 371 SUPERFAMILY SSF117074 13 114 1.44E-14 T 14-10-2018 Amir_6958 3f019eccd87d8ea0e551c5b2eaf91cc9 371 Pfam PF17210 SdrD B-like domain 38 114 1.0E-12 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_5876 23822cef0dcb29f254141d4976b07be1 265 Gene3D G3DSA:3.20.20.370 74 260 1.2E-31 T 14-10-2018 Amir_5876 23822cef0dcb29f254141d4976b07be1 265 SUPERFAMILY SSF88713 48 258 9.12E-35 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Amir_5876 23822cef0dcb29f254141d4976b07be1 265 Pfam PF01522 Polysaccharide deacetylase 80 198 6.3E-22 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Amir_6183 bbbd372334ee5b50575eae33a191aed1 126 SUPERFAMILY SSF54593 14 109 3.82E-6 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_6183 bbbd372334ee5b50575eae33a191aed1 126 Gene3D G3DSA:3.10.180.10 1 126 8.8E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_6149 0275ecd60d1a2203f56952edaf7167cd 703 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 465 686 5.6E-34 T 14-10-2018 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal Amir_6149 0275ecd60d1a2203f56952edaf7167cd 703 Gene3D G3DSA:3.40.50.1820 395 695 5.3E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6149 0275ecd60d1a2203f56952edaf7167cd 703 SUPERFAMILY SSF53474 142 690 3.73E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6149 0275ecd60d1a2203f56952edaf7167cd 703 Gene3D G3DSA:2.60.40.2240 68 183 1.6E-22 T 14-10-2018 Amir_6149 0275ecd60d1a2203f56952edaf7167cd 703 Pfam PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region 97 167 1.5E-19 T 14-10-2018 IPR006862 Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase Amir_4685 9af4657aa119f94b1d9010eaea5c96d0 538 SUPERFAMILY SSF53720 46 504 4.06E-136 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_4685 9af4657aa119f94b1d9010eaea5c96d0 538 Pfam PF00171 Aldehyde dehydrogenase family 50 502 1.7E-136 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_4685 9af4657aa119f94b1d9010eaea5c96d0 538 Gene3D G3DSA:3.40.605.10 51 499 9.1E-144 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_4685 9af4657aa119f94b1d9010eaea5c96d0 538 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 274 281 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Amir_4685 9af4657aa119f94b1d9010eaea5c96d0 538 Gene3D G3DSA:3.40.309.10 278 468 9.1E-144 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_1771 72e1bb482788d6209a5de203a5eb8bd0 197 Pfam PF13699 Domain of unknown function (DUF4157) 80 151 5.4E-26 T 14-10-2018 IPR025295 Domain of unknown function DUF4157 Amir_0046 fa6f79dab1153f480604dbd94db53297 544 TIGRFAM TIGR03491 TIGR03491: putative RecB family nuclease, TM0106 family 13 530 3.3E-63 T 14-10-2018 IPR019993 RecB family nuclease, TM0106, putative Amir_0046 fa6f79dab1153f480604dbd94db53297 544 SUPERFAMILY SSF53098 449 529 1.25E-5 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_0046 fa6f79dab1153f480604dbd94db53297 544 Pfam PF13482 RNase_H superfamily 447 530 1.3E-11 T 14-10-2018 IPR038720 YprB, ribonuclease H-like domain Amir_0693 83aa1fdd2eabf70f19ad2693a160b9a1 207 Gene3D G3DSA:3.20.80.10 1 204 4.3E-70 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amir_0693 83aa1fdd2eabf70f19ad2693a160b9a1 207 SUPERFAMILY SSF55136 121 194 4.01E-10 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amir_0693 83aa1fdd2eabf70f19ad2693a160b9a1 207 Pfam PF06445 GyrI-like small molecule binding domain 21 200 1.1E-22 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain Amir_1848 8633e04ac2e7c55033b5c0832b22a7a3 317 Pfam PF00544 Pectate lyase 72 251 3.6E-43 T 14-10-2018 IPR002022 Pectate lyase Amir_1848 8633e04ac2e7c55033b5c0832b22a7a3 317 SUPERFAMILY SSF51126 38 317 2.2E-79 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_1848 8633e04ac2e7c55033b5c0832b22a7a3 317 Gene3D G3DSA:2.160.20.10 34 317 4.1E-98 T 14-10-2018 IPR012334 Pectin lyase fold Amir_1848 8633e04ac2e7c55033b5c0832b22a7a3 317 SMART SM00656 52 257 2.4E-55 T 14-10-2018 IPR002022 Pectate lyase Amir_1848 8633e04ac2e7c55033b5c0832b22a7a3 317 SMART SM00710 241 274 7900.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_1848 8633e04ac2e7c55033b5c0832b22a7a3 317 SMART SM00710 116 138 3.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_1848 8633e04ac2e7c55033b5c0832b22a7a3 317 SMART SM00710 139 161 590.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_1848 8633e04ac2e7c55033b5c0832b22a7a3 317 SMART SM00710 218 240 5400.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_5305 da7c1aace3db98ff19cf82a1b5ffc64e 239 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 202 233 0.0012 T 14-10-2018 Amir_5748 8aaf9661873e6391fb63ace9e369d0e7 452 SUPERFAMILY SSF53383 46 423 1.09E-82 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_5748 8aaf9661873e6391fb63ace9e369d0e7 452 Pfam PF00266 Aminotransferase class-V 48 415 7.5E-76 T 14-10-2018 IPR000192 Aminotransferase class V domain Amir_5748 8aaf9661873e6391fb63ace9e369d0e7 452 Gene3D G3DSA:3.90.1150.10 45 416 1.8E-101 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_5748 8aaf9661873e6391fb63ace9e369d0e7 452 Gene3D G3DSA:3.40.640.10 65 317 1.8E-101 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_5748 8aaf9661873e6391fb63ace9e369d0e7 452 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 230 249 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Amir_1720 10d561d1e2a69682977b7f486331a795 394 SUPERFAMILY SSF56112 33 313 3.27E-17 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_4409 77c58ac44857841048907f5764f5d0a9 323 Gene3D G3DSA:1.10.510.10 142 275 5.9E-7 T 14-10-2018 Amir_4409 77c58ac44857841048907f5764f5d0a9 323 SUPERFAMILY SSF56112 154 228 3.05E-9 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_5426 2d82db77aef0af7afd1bf624c2987186 193 PIRSF PIRSF019345 5 193 1.7E-54 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Amir_5426 2d82db77aef0af7afd1bf624c2987186 193 SUPERFAMILY SSF46785 98 171 1.63E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5426 2d82db77aef0af7afd1bf624c2987186 193 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 21 181 4.5E-31 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Amir_5426 2d82db77aef0af7afd1bf624c2987186 193 Gene3D G3DSA:1.10.10.10 96 189 1.1E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5426 2d82db77aef0af7afd1bf624c2987186 193 Pfam PF04079 Segregation and condensation complex subunit ScpB 23 180 4.9E-51 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Amir_5426 2d82db77aef0af7afd1bf624c2987186 193 SUPERFAMILY SSF46785 17 94 3.56E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5426 2d82db77aef0af7afd1bf624c2987186 193 Gene3D G3DSA:1.10.10.10 5 95 1.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2766 548d4e52c698dff7b88d6f2049995fb9 555 SUPERFAMILY SSF53756 189 349 4.71E-7 T 14-10-2018 Amir_6186 99f9dd626fc6667c8606cf39ff67e74a 590 Gene3D G3DSA:1.10.3720.10 74 293 3.6E-16 T 14-10-2018 IPR035906 MetI-like superfamily Amir_6186 99f9dd626fc6667c8606cf39ff67e74a 590 SUPERFAMILY SSF52540 306 574 2.13E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_6186 99f9dd626fc6667c8606cf39ff67e74a 590 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_6186 99f9dd626fc6667c8606cf39ff67e74a 590 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 293 2.6E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_6186 99f9dd626fc6667c8606cf39ff67e74a 590 Gene3D G3DSA:3.40.50.300 315 587 1.6E-81 T 14-10-2018 Amir_6186 99f9dd626fc6667c8606cf39ff67e74a 590 SUPERFAMILY SSF161098 83 264 5.1E-19 T 14-10-2018 IPR035906 MetI-like superfamily Amir_6186 99f9dd626fc6667c8606cf39ff67e74a 590 SMART SM00382 345 546 9.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6186 99f9dd626fc6667c8606cf39ff67e74a 590 Pfam PF00005 ABC transporter 337 496 4.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6435 9205bff770d56468d97aa932a9fdd0c7 57 Pfam PF04149 Domain of unknown function (DUF397) 4 49 3.4E-20 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_5982 0b1f073ef1197d543fd744cddfc79b10 224 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 13 215 1.8E-55 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amir_5982 0b1f073ef1197d543fd744cddfc79b10 224 SMART SM00987 52 211 3.6E-30 T 14-10-2018 Amir_5982 0b1f073ef1197d543fd744cddfc79b10 224 SUPERFAMILY SSF52141 8 222 1.96E-71 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amir_5982 0b1f073ef1197d543fd744cddfc79b10 224 Pfam PF03167 Uracil DNA glycosylase superfamily 55 210 2.5E-17 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amir_5982 0b1f073ef1197d543fd744cddfc79b10 224 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 60 69 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amir_5982 0b1f073ef1197d543fd744cddfc79b10 224 Gene3D G3DSA:3.40.470.10 1 224 8.3E-84 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amir_5982 0b1f073ef1197d543fd744cddfc79b10 224 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 10 222 32.74 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amir_5982 0b1f073ef1197d543fd744cddfc79b10 224 SMART SM00986 52 211 3.6E-30 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amir_0691 cadb7d268305e6c268682f911e5a718a 356 SUPERFAMILY SSF55469 164 352 7.96E-22 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_0691 cadb7d268305e6c268682f911e5a718a 356 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 183 352 7.1E-34 T 14-10-2018 IPR020051 SagB-type dehydrogenase domain Amir_0691 cadb7d268305e6c268682f911e5a718a 356 Pfam PF00881 Nitroreductase family 168 348 6.5E-17 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amir_0691 cadb7d268305e6c268682f911e5a718a 356 Gene3D G3DSA:3.40.109.10 114 353 2.0E-55 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_4776 348981cd8f6371bcfbc2950dc0278f7a 596 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 483 521 5.2E-8 T 14-10-2018 IPR022435 Surface-anchored repeat, actinobacteria Amir_4776 348981cd8f6371bcfbc2950dc0278f7a 596 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 207 248 3.8E-14 T 14-10-2018 IPR022435 Surface-anchored repeat, actinobacteria Amir_4776 348981cd8f6371bcfbc2950dc0278f7a 596 TIGRFAM TIGR03773 anch_rpt_wall: putative ABC transporter-associated repeat protein 90 586 4.5E-92 T 14-10-2018 IPR022395 Conserved hypothetical protein CHP03773, ABC transporter-like Amir_6739 5ec36870891cce2b33a80a63bb5ec9b7 332 SMART SM00563 118 237 3.8E-12 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_6739 5ec36870891cce2b33a80a63bb5ec9b7 332 PIRSF PIRSF016753 34 332 2.6E-94 T 14-10-2018 IPR016676 Phospholipid/glycerol acyltransferase, predicted Amir_6739 5ec36870891cce2b33a80a63bb5ec9b7 332 Pfam PF01553 Acyltransferase 104 234 2.8E-13 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amir_6739 5ec36870891cce2b33a80a63bb5ec9b7 332 SUPERFAMILY SSF69593 93 323 1.05E-31 T 14-10-2018 Amir_4943 76a94da1a2023d5d31f9f9d474a2ceed 243 Gene3D G3DSA:3.40.1210.10 1 241 1.8E-55 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Amir_4943 76a94da1a2023d5d31f9f9d474a2ceed 243 SUPERFAMILY SSF64167 1 233 1.96E-45 T 14-10-2018 Amir_4943 76a94da1a2023d5d31f9f9d474a2ceed 243 Pfam PF01975 Survival protein SurE 4 175 4.1E-40 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Amir_2896 039a3cc2691b27ca7de208e9ebd8693a 330 SUPERFAMILY SSF53756 1 326 2.09E-63 T 14-10-2018 Amir_2896 039a3cc2691b27ca7de208e9ebd8693a 330 Gene3D G3DSA:3.40.50.2000 1 56 1.9E-13 T 14-10-2018 Amir_2896 039a3cc2691b27ca7de208e9ebd8693a 330 Gene3D G3DSA:3.40.50.2000 63 320 7.5E-68 T 14-10-2018 Amir_2896 039a3cc2691b27ca7de208e9ebd8693a 330 Gene3D G3DSA:3.40.50.2000 148 311 7.5E-68 T 14-10-2018 Amir_2896 039a3cc2691b27ca7de208e9ebd8693a 330 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 180 293 2.0E-11 T 14-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 Amir_2896 039a3cc2691b27ca7de208e9ebd8693a 330 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 156 296 7.4E-34 T 14-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 Amir_3192 67618f54699c8992754ba319c964fc57 115 Gene3D G3DSA:3.30.70.1060 1 114 3.6E-30 T 14-10-2018 Amir_3192 67618f54699c8992754ba319c964fc57 115 Pfam PF03795 YCII-related domain 2 111 1.0E-10 T 14-10-2018 IPR005545 YCII-related Amir_3192 67618f54699c8992754ba319c964fc57 115 SUPERFAMILY SSF54909 2 113 5.04E-25 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_4722 5d882a220710b8da8618d0c5fa0f34e3 333 SUPERFAMILY SSF54506 2 331 2.71E-115 T 14-10-2018 Amir_4722 5d882a220710b8da8618d0c5fa0f34e3 333 Gene3D G3DSA:3.10.310.10 146 310 4.0E-125 T 14-10-2018 Amir_4722 5d882a220710b8da8618d0c5fa0f34e3 333 Pfam PF05544 Proline racemase 10 331 4.5E-129 T 14-10-2018 IPR008794 Proline racemase family Amir_4722 5d882a220710b8da8618d0c5fa0f34e3 333 Gene3D G3DSA:3.10.310.10 8 331 4.0E-125 T 14-10-2018 Amir_4722 5d882a220710b8da8618d0c5fa0f34e3 333 PIRSF PIRSF029792 1 333 1.0E-129 T 14-10-2018 IPR008794 Proline racemase family Amir_4510 e8c4b9896515efe07f9a93a8cf5d759f 408 Gene3D G3DSA:3.30.565.10 262 382 3.0E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4510 e8c4b9896515efe07f9a93a8cf5d759f 408 Pfam PF07730 Histidine kinase 185 251 3.8E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_4510 e8c4b9896515efe07f9a93a8cf5d759f 408 SUPERFAMILY SSF55874 289 382 2.83E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0803 0fa867a586baad7edde5bc1ba1d93d28 285 SUPERFAMILY SSF56112 18 242 4.9E-12 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_0803 0fa867a586baad7edde5bc1ba1d93d28 285 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 33 263 1.2E-40 T 14-10-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 Amir_1284 fd6139884fd507b6bce860b9dd23a51d 255 SUPERFAMILY SSF46785 8 85 5.81E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1284 fd6139884fd507b6bce860b9dd23a51d 255 Gene3D G3DSA:3.40.1410.10 88 249 1.3E-39 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Amir_1284 fd6139884fd507b6bce860b9dd23a51d 255 SMART SM00866 105 246 5.2E-18 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Amir_1284 fd6139884fd507b6bce860b9dd23a51d 255 SMART SM00345 17 76 1.4E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1284 fd6139884fd507b6bce860b9dd23a51d 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.1E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amir_1284 fd6139884fd507b6bce860b9dd23a51d 255 Gene3D G3DSA:1.10.10.10 13 87 8.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1284 fd6139884fd507b6bce860b9dd23a51d 255 Pfam PF07702 UTRA domain 115 244 2.1E-26 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Amir_1284 fd6139884fd507b6bce860b9dd23a51d 255 SUPERFAMILY SSF64288 64 251 2.71E-33 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Amir_3360 f448ac70e02cf5695ab5e076f459a5c7 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 9.9E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3360 f448ac70e02cf5695ab5e076f459a5c7 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3360 f448ac70e02cf5695ab5e076f459a5c7 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3360 f448ac70e02cf5695ab5e076f459a5c7 194 Gene3D G3DSA:1.10.357.10 2 187 6.5E-23 T 14-10-2018 Amir_3360 f448ac70e02cf5695ab5e076f459a5c7 194 SUPERFAMILY SSF46689 5 81 3.13E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5717 7c233a4ed3c12204518515bc62cca147 163 Gene3D G3DSA:1.10.1660.10 11 141 4.5E-36 T 14-10-2018 Amir_5717 7c233a4ed3c12204518515bc62cca147 163 Pfam PF00376 MerR family regulatory protein 19 55 4.0E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_5717 7c233a4ed3c12204518515bc62cca147 163 SMART SM00422 18 86 4.6E-26 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_5717 7c233a4ed3c12204518515bc62cca147 163 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 30 43 4.7E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_5717 7c233a4ed3c12204518515bc62cca147 163 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 53 73 4.7E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_5717 7c233a4ed3c12204518515bc62cca147 163 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 19 30 4.7E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_5717 7c233a4ed3c12204518515bc62cca147 163 Pfam PF09278 MerR, DNA binding 60 125 4.9E-19 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding Amir_5717 7c233a4ed3c12204518515bc62cca147 163 SUPERFAMILY SSF46955 18 138 1.43E-29 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_5717 7c233a4ed3c12204518515bc62cca147 163 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 18 155 9.2E-62 T 14-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 Amir_3460 e2a172ddc975e24a0fee2a1464d17946 344 Gene3D G3DSA:3.90.1200.10 106 333 5.8E-68 T 14-10-2018 Amir_3460 e2a172ddc975e24a0fee2a1464d17946 344 Gene3D G3DSA:3.30.200.20 10 101 1.3E-28 T 14-10-2018 Amir_3460 e2a172ddc975e24a0fee2a1464d17946 344 SUPERFAMILY SSF56112 20 307 1.11E-57 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_3460 e2a172ddc975e24a0fee2a1464d17946 344 Pfam PF01636 Phosphotransferase enzyme family 25 242 4.5E-48 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_6335 b94559627a7c5367b277b0d21dafd565 181 Gene3D G3DSA:3.90.79.10 7 180 6.7E-36 T 14-10-2018 Amir_6335 b94559627a7c5367b277b0d21dafd565 181 SUPERFAMILY SSF55811 46 168 2.03E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_6335 b94559627a7c5367b277b0d21dafd565 181 Pfam PF00293 NUDIX domain 48 170 1.5E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_4976 e582ee8a4f87cee6346ef115e633e7c3 154 Gene3D G3DSA:1.10.10.10 2 144 1.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4976 e582ee8a4f87cee6346ef115e633e7c3 154 SMART SM00347 24 128 2.9E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4976 e582ee8a4f87cee6346ef115e633e7c3 154 Pfam PF01047 MarR family 41 93 1.1E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4976 e582ee8a4f87cee6346ef115e633e7c3 154 SUPERFAMILY SSF46785 7 139 2.4E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4976 e582ee8a4f87cee6346ef115e633e7c3 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 1.9E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4976 e582ee8a4f87cee6346ef115e633e7c3 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.9E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4976 e582ee8a4f87cee6346ef115e633e7c3 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.9E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2747 4421d65dc07f353f8fa104c4966a4b8b 216 Pfam PF03734 L,D-transpeptidase catalytic domain 36 207 6.1E-8 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 257 311 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 Gene3D G3DSA:1.20.210.10 18 541 3.0E-206 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 SUPERFAMILY SSF81442 25 535 2.49E-176 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 PRINTS PR01165 Cytochrome c oxidase subunit I signature 101 125 3.1E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 PRINTS PR01165 Cytochrome c oxidase subunit I signature 386 405 3.1E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 194 3.1E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 PRINTS PR01165 Cytochrome c oxidase subunit I signature 74 97 3.1E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 PRINTS PR01165 Cytochrome c oxidase subunit I signature 144 156 3.1E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 376 3.1E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 PRINTS PR01165 Cytochrome c oxidase subunit I signature 301 316 3.1E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 PRINTS PR01165 Cytochrome c oxidase subunit I signature 234 255 3.1E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 344 3.1E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 PRINTS PR01165 Cytochrome c oxidase subunit I signature 255 276 3.1E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 PRINTS PR01165 Cytochrome c oxidase subunit I signature 436 457 3.1E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 PRINTS PR01165 Cytochrome c oxidase subunit I signature 205 224 3.1E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 PRINTS PR01165 Cytochrome c oxidase subunit I signature 27 52 3.1E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 36 480 2.4E-150 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2198 9f4fe24bdbc53129cf91cd51d1b67c31 589 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 29 532 1.5E-217 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Amir_2674 453513ef14bd3ee121cc61e6bd6876d8 257 SUPERFAMILY SSF51971 1 42 1.41E-9 T 14-10-2018 Amir_2674 453513ef14bd3ee121cc61e6bd6876d8 257 Gene3D G3DSA:3.50.50.60 1 59 5.3E-9 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2674 453513ef14bd3ee121cc61e6bd6876d8 257 SUPERFAMILY SSF51905 1 204 2.33E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_2674 453513ef14bd3ee121cc61e6bd6876d8 257 Pfam PF13450 NAD(P)-binding Rossmann-like domain 4 42 1.3E-7 T 14-10-2018 Amir_4780 bd9c444ba88d4e2b6e1be52f4ba7ddfd 311 Pfam PF00288 GHMP kinases N terminal domain 99 142 5.6E-6 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Amir_4780 bd9c444ba88d4e2b6e1be52f4ba7ddfd 311 Gene3D G3DSA:3.30.230.10 31 161 2.2E-9 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amir_4780 bd9c444ba88d4e2b6e1be52f4ba7ddfd 311 SUPERFAMILY SSF54211 13 173 3.79E-17 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amir_6906 4788e5cf05bd61cdb004d3a5703bd5c9 381 SUPERFAMILY SSF51695 52 378 2.41E-80 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amir_6906 4788e5cf05bd61cdb004d3a5703bd5c9 381 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 58 373 7.0E-51 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Amir_6906 4788e5cf05bd61cdb004d3a5703bd5c9 381 Gene3D G3DSA:3.20.20.190 51 379 2.5E-110 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amir_5403 48b7f99a6b31645cc2e937a947872465 118 Pfam PF01740 STAS domain 17 114 2.4E-17 T 14-10-2018 IPR002645 STAS domain Amir_5403 48b7f99a6b31645cc2e937a947872465 118 SUPERFAMILY SSF52091 14 116 5.1E-23 T 14-10-2018 IPR036513 STAS domain superfamily Amir_5403 48b7f99a6b31645cc2e937a947872465 118 Gene3D G3DSA:3.30.750.24 8 117 4.0E-30 T 14-10-2018 IPR036513 STAS domain superfamily Amir_5403 48b7f99a6b31645cc2e937a947872465 118 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 16 113 3.5E-22 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Amir_0079 629ff9f6f5197e81254f173d77bdf7a7 314 SUPERFAMILY SSF103642 15 34 2.13E-6 T 14-10-2018 Amir_0079 629ff9f6f5197e81254f173d77bdf7a7 314 Pfam PF02810 SEC-C motif 19 34 7.8E-7 T 14-10-2018 IPR004027 SEC-C motif Amir_5375 64ca82b4fa0089c068fcc81fcb0b0bef 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 209 4.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5375 64ca82b4fa0089c068fcc81fcb0b0bef 218 Pfam PF00072 Response regulator receiver domain 9 120 1.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5375 64ca82b4fa0089c068fcc81fcb0b0bef 218 Gene3D G3DSA:3.40.50.12740 7 215 2.1E-67 T 14-10-2018 Amir_5375 64ca82b4fa0089c068fcc81fcb0b0bef 218 SUPERFAMILY SSF52172 6 137 1.57E-33 T 14-10-2018 IPR011006 CheY-like superfamily Amir_5375 64ca82b4fa0089c068fcc81fcb0b0bef 218 SUPERFAMILY SSF46894 141 215 1.29E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_5375 64ca82b4fa0089c068fcc81fcb0b0bef 218 SMART SM00421 153 210 3.8E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5375 64ca82b4fa0089c068fcc81fcb0b0bef 218 SMART SM00448 7 120 3.8E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5375 64ca82b4fa0089c068fcc81fcb0b0bef 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5375 64ca82b4fa0089c068fcc81fcb0b0bef 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5375 64ca82b4fa0089c068fcc81fcb0b0bef 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_5375 64ca82b4fa0089c068fcc81fcb0b0bef 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_4710 83f9d3ff6873d7dba52ef2c04ff4b869 504 Pfam PF08386 TAP-like protein 390 486 9.0E-26 T 14-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal Amir_4710 83f9d3ff6873d7dba52ef2c04ff4b869 504 SUPERFAMILY SSF53474 81 474 4.66E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3622 0ac5a82bf6f06b33de439b37709154a8 301 PIRSF PIRSF037442 7 298 3.8E-69 T 14-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 Amir_3622 0ac5a82bf6f06b33de439b37709154a8 301 Pfam PF12146 Serine aminopeptidase, S33 39 163 7.5E-24 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Amir_3622 0ac5a82bf6f06b33de439b37709154a8 301 Gene3D G3DSA:3.40.50.1820 15 287 4.5E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3622 0ac5a82bf6f06b33de439b37709154a8 301 SUPERFAMILY SSF53474 17 256 3.65E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2734 85211aa8b95858da514e410de689dc6b 159 Pfam PF11188 Protein of unknown function (DUF2975) 35 159 1.8E-31 T 14-10-2018 IPR021354 Protein of unknown function DUF2975 Amir_5078 2fc29bebde05e5f75c5cbc135e799859 210 SUPERFAMILY SSF53597 2 190 2.36E-23 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_5078 2fc29bebde05e5f75c5cbc135e799859 210 Gene3D G3DSA:3.40.430.10 1 193 1.2E-37 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_5078 2fc29bebde05e5f75c5cbc135e799859 210 Pfam PF01872 RibD C-terminal domain 2 181 3.1E-23 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Amir_1805 b35453bdff6fb6a5984101e1c65260f1 170 Pfam PF00486 Transcriptional regulatory protein, C terminal 73 146 6.1E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_1805 b35453bdff6fb6a5984101e1c65260f1 170 Gene3D G3DSA:1.10.10.10 56 153 1.7E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1805 b35453bdff6fb6a5984101e1c65260f1 170 SMART SM00862 73 146 2.5E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_1805 b35453bdff6fb6a5984101e1c65260f1 170 SUPERFAMILY SSF46894 60 147 3.97E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_3034 e5ad96d9a26215deb0fc93184c570efd 153 SUPERFAMILY SSF54593 5 152 3.13E-8 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_3034 e5ad96d9a26215deb0fc93184c570efd 153 Gene3D G3DSA:3.10.180.10 1 153 7.5E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_2437 5c94081136ff3042dbb3a70aa10dad96 1277 Gene3D G3DSA:3.40.50.300 966 1195 1.3E-12 T 14-10-2018 Amir_2437 5c94081136ff3042dbb3a70aa10dad96 1277 Pfam PF11774 Lsr2 1228 1275 2.4E-9 T 14-10-2018 IPR024412 Lsr2 Amir_2437 5c94081136ff3042dbb3a70aa10dad96 1277 Gene3D G3DSA:1.20.890.50 1243 1277 1.4E-13 T 14-10-2018 Amir_2437 5c94081136ff3042dbb3a70aa10dad96 1277 SUPERFAMILY SSF52540 1 1190 1.73E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2437 5c94081136ff3042dbb3a70aa10dad96 1277 ProDom PD026347 LSR2-LIKE LSR2 ANTIGEN IMMUNE PRECURSOR RESPONSE SIGNAL PLASMID LYSYL GP61 1245 1276 1.0E-4 T 14-10-2018 IPR024412 Lsr2 Amir_2437 5c94081136ff3042dbb3a70aa10dad96 1277 Pfam PF13514 AAA domain 1 191 1.1E-42 T 14-10-2018 IPR038734 Uncharacterized protein YhaN, AAA domain Amir_1679 3de710232f981059aa55133fc41e31f5 347 Gene3D G3DSA:3.40.50.300 13 345 2.9E-89 T 14-10-2018 Amir_1679 3de710232f981059aa55133fc41e31f5 347 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 252 317 2.7E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_1679 3de710232f981059aa55133fc41e31f5 347 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 250 339 4.0E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amir_1679 3de710232f981059aa55133fc41e31f5 347 SMART SM00382 54 250 9.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1679 3de710232f981059aa55133fc41e31f5 347 Pfam PF00005 ABC transporter 46 200 1.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1679 3de710232f981059aa55133fc41e31f5 347 SUPERFAMILY SSF52540 16 271 9.99E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1679 3de710232f981059aa55133fc41e31f5 347 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_6926 71ea5d821451a1bab571a82e8f4ce0cd 249 Pfam PF09335 SNARE associated Golgi protein 52 179 1.2E-22 T 14-10-2018 IPR032816 SNARE associated Golgi protein Amir_3079 6fa5c575edc830f68c1c22bdc207f75e 354 Pfam PF00891 O-methyltransferase 116 324 2.7E-41 T 14-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 Amir_3079 6fa5c575edc830f68c1c22bdc207f75e 354 PIRSF PIRSF005739 1 328 4.1E-43 T 14-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 Amir_3079 6fa5c575edc830f68c1c22bdc207f75e 354 Gene3D G3DSA:3.40.50.150 98 331 4.2E-59 T 14-10-2018 Amir_3079 6fa5c575edc830f68c1c22bdc207f75e 354 SUPERFAMILY SSF53335 100 333 1.09E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3079 6fa5c575edc830f68c1c22bdc207f75e 354 Gene3D G3DSA:1.10.10.10 2 95 9.9E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3079 6fa5c575edc830f68c1c22bdc207f75e 354 SUPERFAMILY SSF46785 21 98 7.18E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_6200 4c15ad3144466bb9816062a42305e5ce 318 Gene3D G3DSA:3.40.50.720 128 265 1.4E-76 T 14-10-2018 Amir_6200 4c15ad3144466bb9816062a42305e5ce 318 SUPERFAMILY SSF50129 2 149 8.83E-31 T 14-10-2018 IPR011032 GroES-like superfamily Amir_6200 4c15ad3144466bb9816062a42305e5ce 318 SMART SM00829 10 314 1.7E-12 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_6200 4c15ad3144466bb9816062a42305e5ce 318 Gene3D G3DSA:3.90.180.10 8 311 1.4E-76 T 14-10-2018 Amir_6200 4c15ad3144466bb9816062a42305e5ce 318 SUPERFAMILY SSF51735 117 291 3.44E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6200 4c15ad3144466bb9816062a42305e5ce 318 Pfam PF13602 Zinc-binding dehydrogenase 188 312 5.1E-21 T 14-10-2018 Amir_3099 49805920af8457bc6c2bf1c247412621 385 Gene3D G3DSA:1.10.10.10 9 73 6.9E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3099 49805920af8457bc6c2bf1c247412621 385 Gene3D G3DSA:3.30.420.40 88 359 9.2E-42 T 14-10-2018 Amir_3099 49805920af8457bc6c2bf1c247412621 385 SUPERFAMILY SSF46785 15 70 1.76E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3099 49805920af8457bc6c2bf1c247412621 385 Gene3D G3DSA:3.30.420.40 193 351 9.2E-42 T 14-10-2018 Amir_3099 49805920af8457bc6c2bf1c247412621 385 SUPERFAMILY SSF53067 79 365 3.54E-28 T 14-10-2018 Amir_3099 49805920af8457bc6c2bf1c247412621 385 Pfam PF00480 ROK family 124 359 4.1E-26 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_5311 0d581b545a9a9fd15f55409e47f53aea 173 SUPERFAMILY SSF52096 62 168 1.61E-15 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amir_5311 0d581b545a9a9fd15f55409e47f53aea 173 Gene3D G3DSA:3.90.226.10 47 173 1.1E-11 T 14-10-2018 Amir_6370 58162dc271f3c73d6b554c9e0655184c 283 Pfam PF00005 ABC transporter 24 150 7.9E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_6370 58162dc271f3c73d6b554c9e0655184c 283 Gene3D G3DSA:3.40.50.300 2 222 1.3E-51 T 14-10-2018 Amir_6370 58162dc271f3c73d6b554c9e0655184c 283 SMART SM00382 33 200 2.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_6370 58162dc271f3c73d6b554c9e0655184c 283 SUPERFAMILY SSF52540 9 215 3.95E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2033 7067dd33c47e6540b82ecffed3a31b81 121 SUPERFAMILY SSF47413 38 96 7.51E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2033 7067dd33c47e6540b82ecffed3a31b81 121 Gene3D G3DSA:1.10.260.40 12 91 2.2E-7 T 14-10-2018 Amir_2033 7067dd33c47e6540b82ecffed3a31b81 121 Pfam PF13560 Helix-turn-helix domain 38 91 1.8E-7 T 14-10-2018 Amir_2033 7067dd33c47e6540b82ecffed3a31b81 121 SMART SM00530 37 92 8.7E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_6558 a9007df7aae7b66944e2f842bab70c22 620 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 620 6.2E-243 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Amir_6558 a9007df7aae7b66944e2f842bab70c22 620 Gene3D G3DSA:3.40.50.10490 454 605 3.4E-136 T 14-10-2018 Amir_6558 a9007df7aae7b66944e2f842bab70c22 620 Gene3D G3DSA:3.60.20.10 2 247 3.6E-72 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_6558 a9007df7aae7b66944e2f842bab70c22 620 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 620 40.377 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Amir_6558 a9007df7aae7b66944e2f842bab70c22 620 Pfam PF13522 Glutamine amidotransferase domain 68 200 9.3E-21 T 14-10-2018 Amir_6558 a9007df7aae7b66944e2f842bab70c22 620 Gene3D G3DSA:3.40.50.10490 258 619 3.4E-136 T 14-10-2018 Amir_6558 a9007df7aae7b66944e2f842bab70c22 620 Pfam PF01380 SIS domain 297 421 3.2E-33 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Amir_6558 a9007df7aae7b66944e2f842bab70c22 620 Pfam PF01380 SIS domain 469 598 2.1E-21 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Amir_6558 a9007df7aae7b66944e2f842bab70c22 620 SUPERFAMILY SSF56235 2 243 1.2E-65 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_6558 a9007df7aae7b66944e2f842bab70c22 620 SUPERFAMILY SSF53697 253 620 3.53E-104 T 14-10-2018 Amir_5317 ae3a1de129ff4ad3af4f4774898a952b 279 PRINTS PR00069 Aldo-keto reductase signature 141 158 8.0E-10 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_5317 ae3a1de129ff4ad3af4f4774898a952b 279 PRINTS PR00069 Aldo-keto reductase signature 212 236 8.0E-10 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_5317 ae3a1de129ff4ad3af4f4774898a952b 279 PRINTS PR00069 Aldo-keto reductase signature 110 128 8.0E-10 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_5317 ae3a1de129ff4ad3af4f4774898a952b 279 PRINTS PR00069 Aldo-keto reductase signature 45 69 8.0E-10 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_5317 ae3a1de129ff4ad3af4f4774898a952b 279 SUPERFAMILY SSF51430 5 278 4.19E-83 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_5317 ae3a1de129ff4ad3af4f4774898a952b 279 Gene3D G3DSA:3.20.20.100 6 279 6.0E-90 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_5317 ae3a1de129ff4ad3af4f4774898a952b 279 Pfam PF00248 Aldo/keto reductase family 15 278 4.1E-65 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_0309 fc8e9b51959ed04c755f197fb13b93a2 337 Gene3D G3DSA:1.20.150.30 9 129 1.0E-23 T 14-10-2018 Amir_0309 fc8e9b51959ed04c755f197fb13b93a2 337 TIGRFAM TIGR03883 DUF2342_F420: uncharacterized protein, coenzyme F420 biosynthesis associated 10 335 2.2E-116 T 14-10-2018 IPR022454 Conserved hypothetical protein CHP03883, F420 biosynthesis associated Amir_0309 fc8e9b51959ed04c755f197fb13b93a2 337 SUPERFAMILY SSF55486 10 335 7.32E-101 T 14-10-2018 Amir_0309 fc8e9b51959ed04c755f197fb13b93a2 337 Pfam PF10103 Zincin-like metallopeptidase 10 332 8.2E-110 T 14-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 Amir_0309 fc8e9b51959ed04c755f197fb13b93a2 337 TIGRFAM TIGR03624 TIGR03624: putative hydrolase 10 335 3.0E-100 T 14-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 Amir_2829 a7f979b9e6afae73dfc54c9a73336428 203 Gene3D G3DSA:1.10.357.10 13 203 2.5E-43 T 14-10-2018 Amir_2829 a7f979b9e6afae73dfc54c9a73336428 203 SUPERFAMILY SSF46689 18 98 2.0E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2829 a7f979b9e6afae73dfc54c9a73336428 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 76 6.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4670 59ed241d079e1746a148b8d4baba122a 297 Gene3D G3DSA:3.40.50.1820 4 287 1.1E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4670 59ed241d079e1746a148b8d4baba122a 297 SUPERFAMILY SSF53474 5 282 1.1E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4670 59ed241d079e1746a148b8d4baba122a 297 Pfam PF12740 Chlorophyllase enzyme 24 137 8.8E-9 T 14-10-2018 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164 Amir_6919 db7cc112abd056b5639ceca97d0591aa 312 Pfam PF00248 Aldo/keto reductase family 14 308 9.5E-61 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_6919 db7cc112abd056b5639ceca97d0591aa 312 SUPERFAMILY SSF51430 2 308 2.75E-87 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_6919 db7cc112abd056b5639ceca97d0591aa 312 Gene3D G3DSA:3.20.20.100 1 312 4.7E-102 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_2247 c1534f04e31432c7f09bce477a9c2425 452 PIRSF PIRSF018077 1 452 5.1E-184 T 14-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 Amir_2247 c1534f04e31432c7f09bce477a9c2425 452 Pfam PF03136 Pup-ligase protein 4 422 4.1E-160 T 14-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 Amir_2247 c1534f04e31432c7f09bce477a9c2425 452 TIGRFAM TIGR03686 pupylate_PafA: Pup--protein ligase 3 452 5.7E-237 T 14-10-2018 IPR022279 Pup--protein ligase GO:0010498|GO:0016879|GO:0019941 MetaCyc: PWY-7893 Amir_2247 c1534f04e31432c7f09bce477a9c2425 452 Hamap MF_02111 Pup--protein ligase [pafA]. 1 452 51.288 T 14-10-2018 IPR022279 Pup--protein ligase GO:0010498|GO:0016879|GO:0019941 MetaCyc: PWY-7893 Amir_4817 ff1e853bbb85455e57fd2c1934d711ab 221 SUPERFAMILY SSF51338 17 70 1.03E-6 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_4817 ff1e853bbb85455e57fd2c1934d711ab 221 Gene3D G3DSA:2.30.40.10 17 106 3.9E-6 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_4817 ff1e853bbb85455e57fd2c1934d711ab 221 Gene3D G3DSA:2.40.128.290 147 221 1.4E-28 T 14-10-2018 IPR038646 Atu4866-like superfamily Amir_4817 ff1e853bbb85455e57fd2c1934d711ab 221 Pfam PF11512 Agrobacterium tumefaciens protein Atu4866 149 221 1.2E-33 T 14-10-2018 IPR020955 Uncharacterised protein family Atu4866 Amir_2097 daa0d1cc790deb4ab69b1c9b751abf39 181 Pfam PF14024 Protein of unknown function (DUF4240) 67 138 1.3E-8 T 14-10-2018 IPR025334 Domain of unknown function (DUF4240 Amir_5545 e66e60bcb5a5774c05cf00dbf21d0b4c 126 Pfam PF01042 Endoribonuclease L-PSP 15 123 8.2E-23 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Amir_5545 e66e60bcb5a5774c05cf00dbf21d0b4c 126 SUPERFAMILY SSF55298 1 124 2.2E-34 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_5545 e66e60bcb5a5774c05cf00dbf21d0b4c 126 Gene3D G3DSA:3.30.1330.40 1 123 2.2E-32 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_6068 2a964d48ac92e4515107c2c547e46a4d 207 Gene3D G3DSA:2.60.120.10 44 178 1.2E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_6068 2a964d48ac92e4515107c2c547e46a4d 207 Pfam PF05995 Cysteine dioxygenase type I 62 175 4.3E-19 T 14-10-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 Amir_6068 2a964d48ac92e4515107c2c547e46a4d 207 SUPERFAMILY SSF51182 34 176 7.53E-29 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_0672 0c89c33216f47c9ff7a19cbf13f0613f 121 Pfam PF04977 Septum formation initiator 12 85 5.0E-14 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC Amir_1659 5163cd345551c6ce19f145297959fc9d 194 Gene3D G3DSA:3.90.79.10 16 193 2.6E-29 T 14-10-2018 Amir_1659 5163cd345551c6ce19f145297959fc9d 194 Pfam PF00293 NUDIX domain 55 148 1.3E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_1659 5163cd345551c6ce19f145297959fc9d 194 SUPERFAMILY SSF55811 18 188 2.98E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_2203 edcc084a3e7efe32d430818fe886c7a7 150 Pfam PF12802 MarR family 16 75 1.7E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2203 edcc084a3e7efe32d430818fe886c7a7 150 Gene3D G3DSA:1.10.10.10 1 81 3.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2203 edcc084a3e7efe32d430818fe886c7a7 150 SUPERFAMILY SSF46785 3 103 1.68E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0841 b6f5b834c8785af650d44e28d805f229 252 Pfam PF01903 CbiX 12 98 5.3E-13 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 Amir_0841 b6f5b834c8785af650d44e28d805f229 252 Gene3D G3DSA:3.40.50.1400 116 246 4.2E-11 T 14-10-2018 Amir_0841 b6f5b834c8785af650d44e28d805f229 252 SUPERFAMILY SSF53800 7 174 6.54E-20 T 14-10-2018 Amir_0841 b6f5b834c8785af650d44e28d805f229 252 Gene3D G3DSA:3.40.50.1400 5 115 2.8E-21 T 14-10-2018 Amir_3693 158577fdc175bbf2d6d4e30e78d543bc 65 Pfam PF13459 4Fe-4S single cluster domain 6 61 7.2E-13 T 14-10-2018 Amir_3693 158577fdc175bbf2d6d4e30e78d543bc 65 Gene3D G3DSA:3.30.70.20 2 65 6.3E-18 T 14-10-2018 Amir_3693 158577fdc175bbf2d6d4e30e78d543bc 65 PRINTS PR00352 3Fe-4S ferredoxin signature 19 29 4.9E-6 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Amir_3693 158577fdc175bbf2d6d4e30e78d543bc 65 PRINTS PR00352 3Fe-4S ferredoxin signature 50 62 4.9E-6 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Amir_3693 158577fdc175bbf2d6d4e30e78d543bc 65 PRINTS PR00352 3Fe-4S ferredoxin signature 8 19 4.9E-6 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Amir_3693 158577fdc175bbf2d6d4e30e78d543bc 65 SUPERFAMILY SSF54862 5 61 2.03E-9 T 14-10-2018 Amir_3471 9092c34fc5d256d6cec894fe880174bd 274 Pfam PF04616 Glycosyl hydrolases family 43 39 232 4.3E-9 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Amir_3471 9092c34fc5d256d6cec894fe880174bd 274 SUPERFAMILY SSF75005 41 273 9.57E-29 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3471 9092c34fc5d256d6cec894fe880174bd 274 Gene3D G3DSA:2.115.10.20 32 271 7.8E-23 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_6604 900e97fe7daa0d62377819b3766a0ed4 122 SUPERFAMILY SSF50193 2 122 3.53E-50 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Amir_6604 900e97fe7daa0d62377819b3766a0ed4 122 Gene3D G3DSA:2.40.150.20 1 122 7.1E-53 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Amir_6604 900e97fe7daa0d62377819b3766a0ed4 122 SMART SM01374 1 122 1.2E-86 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Amir_6604 900e97fe7daa0d62377819b3766a0ed4 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6604 900e97fe7daa0d62377819b3766a0ed4 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.9E-56 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Amir_6604 900e97fe7daa0d62377819b3766a0ed4 122 Pfam PF00238 Ribosomal protein L14p/L23e 2 122 1.9E-54 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Amir_6604 900e97fe7daa0d62377819b3766a0ed4 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.154 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Amir_5986 59088ec19b836bc5ac11a1e05280e271 77 SUPERFAMILY SSF54909 2 76 7.24E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_5986 59088ec19b836bc5ac11a1e05280e271 77 Pfam PF01037 Lrp/AsnC ligand binding domain 6 75 5.3E-13 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Amir_5986 59088ec19b836bc5ac11a1e05280e271 77 Gene3D G3DSA:3.30.70.920 1 72 1.5E-19 T 14-10-2018 Amir_0547 08ced0f18a81fc92ea26526e7ecba112 263 Pfam PF12146 Serine aminopeptidase, S33 27 244 1.4E-48 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Amir_0547 08ced0f18a81fc92ea26526e7ecba112 263 SUPERFAMILY SSF53474 10 258 3.08E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0547 08ced0f18a81fc92ea26526e7ecba112 263 Gene3D G3DSA:3.40.50.1820 10 260 2.2E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0547 08ced0f18a81fc92ea26526e7ecba112 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 1.7E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_0547 08ced0f18a81fc92ea26526e7ecba112 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 111 124 1.7E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_0547 08ced0f18a81fc92ea26526e7ecba112 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 1.7E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_3481 f5f81b2e6242a5f1f9fd6c8e3e39ad1b 132 Pfam PF02575 YbaB/EbfC DNA-binding family 25 97 5.5E-6 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_5695 439669b25405bd4efdd77446821ccaf1 308 Gene3D G3DSA:3.40.190.10 111 244 2.6E-64 T 14-10-2018 Amir_5695 439669b25405bd4efdd77446821ccaf1 308 Pfam PF16868 NMT1-like family 32 306 2.7E-46 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Amir_5695 439669b25405bd4efdd77446821ccaf1 308 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 6 307 4.4E-56 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Amir_5695 439669b25405bd4efdd77446821ccaf1 308 SUPERFAMILY SSF53850 27 306 1.3E-52 T 14-10-2018 Amir_5695 439669b25405bd4efdd77446821ccaf1 308 Gene3D G3DSA:3.40.190.10 32 305 2.6E-64 T 14-10-2018 Amir_4027 2398d4e73d4679ba0d91894c763b6902 128 SUPERFAMILY SSF158682 4 126 1.27E-5 T 14-10-2018 IPR029024 TerB-like Amir_4027 2398d4e73d4679ba0d91894c763b6902 128 Gene3D G3DSA:1.10.3680.10 3 127 1.9E-6 T 14-10-2018 IPR029024 TerB-like Amir_3946 a6e0ecebf7b149677b52bea7958f3f2d 112 SUPERFAMILY SSF52091 5 107 1.06E-15 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3946 a6e0ecebf7b149677b52bea7958f3f2d 112 Gene3D G3DSA:3.30.750.24 2 109 8.9E-24 T 14-10-2018 IPR036513 STAS domain superfamily Amir_3946 a6e0ecebf7b149677b52bea7958f3f2d 112 Pfam PF13466 STAS domain 11 93 7.2E-12 T 14-10-2018 IPR002645 STAS domain Amir_3946 a6e0ecebf7b149677b52bea7958f3f2d 112 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 4 105 2.7E-18 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Amir_3526 5645fa5f509d343c4683dfe622d11fcf 321 Gene3D G3DSA:2.130.10.10 147 321 1.6E-11 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_3526 5645fa5f509d343c4683dfe622d11fcf 321 SUPERFAMILY SSF101898 55 319 2.54E-14 T 14-10-2018 Amir_0511 1b0207fd5a858122b5e6946a7da631af 266 PIRSF PIRSF006648 10 261 9.0E-25 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_0511 1b0207fd5a858122b5e6946a7da631af 266 Pfam PF01061 ABC-2 type transporter 14 219 4.5E-27 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Amir_2624 6f924dd81b39ba37ca49db804461725b 226 Pfam PF00857 Isochorismatase family 19 207 5.2E-37 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Amir_2624 6f924dd81b39ba37ca49db804461725b 226 SUPERFAMILY SSF52499 11 213 1.06E-46 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Amir_2624 6f924dd81b39ba37ca49db804461725b 226 Gene3D G3DSA:3.40.50.850 5 216 2.4E-50 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Amir_2128 af8389c053ddbf7c394cbb578ecb84ed 64 Pfam PF04149 Domain of unknown function (DUF397) 7 58 1.7E-11 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_5071 2fcd10c0f24d66147d729e3a7dc8233b 394 SUPERFAMILY SSF51905 2 387 4.73E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5071 2fcd10c0f24d66147d729e3a7dc8233b 394 Pfam PF01593 Flavin containing amine oxidoreductase 11 384 8.7E-38 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Amir_5071 2fcd10c0f24d66147d729e3a7dc8233b 394 Gene3D G3DSA:3.50.50.60 1 251 3.9E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_5858 9b8310065c4c3be5c7d52c9a39490949 377 Gene3D G3DSA:3.30.950.10 114 228 7.8E-31 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Amir_5858 9b8310065c4c3be5c7d52c9a39490949 377 Gene3D G3DSA:3.40.1010.10 2 113 1.1E-23 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amir_5858 9b8310065c4c3be5c7d52c9a39490949 377 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Amir_5858 9b8310065c4c3be5c7d52c9a39490949 377 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 205 1.2E-37 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Amir_5858 9b8310065c4c3be5c7d52c9a39490949 377 SUPERFAMILY SSF53790 1 231 1.96E-50 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amir_6284 bd5ab4fbfaa959ac68709b0c106a35f9 202 PIRSF PIRSF000709 139 165 510.0 T 14-10-2018 Amir_6284 bd5ab4fbfaa959ac68709b0c106a35f9 202 PIRSF PIRSF000709 2 107 3.5E-9 T 14-10-2018 Amir_6284 bd5ab4fbfaa959ac68709b0c106a35f9 202 Gene3D G3DSA:3.40.50.1240 2 198 1.9E-53 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_6284 bd5ab4fbfaa959ac68709b0c106a35f9 202 SUPERFAMILY SSF53254 5 194 6.48E-50 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Amir_6284 bd5ab4fbfaa959ac68709b0c106a35f9 202 SMART SM00855 6 155 2.9E-18 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_6284 bd5ab4fbfaa959ac68709b0c106a35f9 202 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 193 4.8E-48 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amir_2977 87744eee8df625ffe5fa8e295bbe4886 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 5.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2977 87744eee8df625ffe5fa8e295bbe4886 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 5.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2977 87744eee8df625ffe5fa8e295bbe4886 196 SUPERFAMILY SSF46689 10 84 3.33E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2977 87744eee8df625ffe5fa8e295bbe4886 196 Gene3D G3DSA:1.10.357.10 15 195 4.8E-35 T 14-10-2018 Amir_2977 87744eee8df625ffe5fa8e295bbe4886 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 1.1E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2977 87744eee8df625ffe5fa8e295bbe4886 196 SUPERFAMILY SSF48498 88 192 1.78E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_5925 89ab9b92e11c132d120ac6c114fc1b53 79 SUPERFAMILY SSF54814 18 61 1.5E-7 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Amir_5925 89ab9b92e11c132d120ac6c114fc1b53 79 Gene3D G3DSA:3.30.300.20 7 75 3.3E-5 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Amir_5925 89ab9b92e11c132d120ac6c114fc1b53 79 Pfam PF13083 KH domain 6 66 2.6E-19 T 14-10-2018 Amir_5925 89ab9b92e11c132d120ac6c114fc1b53 79 Hamap MF_00088 UPF0109 protein . 4 75 21.383 T 14-10-2018 IPR020627 Uncharacterised protein family UPF0109 Amir_1574 8f9b3e871fce86770ce3b889b2fe82f5 167 Gene3D G3DSA:3.30.10.20 94 162 6.4E-9 T 14-10-2018 Amir_6108 99eb7cec8e3343f51ebf19a3dc1f4d74 176 SUPERFAMILY SSF55729 12 161 1.27E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_6108 99eb7cec8e3343f51ebf19a3dc1f4d74 176 Pfam PF13302 Acetyltransferase (GNAT) domain 16 155 1.3E-24 T 14-10-2018 IPR000182 GNAT domain Amir_6108 99eb7cec8e3343f51ebf19a3dc1f4d74 176 Gene3D G3DSA:3.40.630.30 9 170 2.2E-35 T 14-10-2018 Amir_0828 90661103f0548cf993bff72c14c6cd57 275 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 72 4.8E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0828 90661103f0548cf993bff72c14c6cd57 275 SUPERFAMILY SSF48498 94 206 9.64E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_0828 90661103f0548cf993bff72c14c6cd57 275 Gene3D G3DSA:1.10.357.10 9 214 4.4E-40 T 14-10-2018 Amir_0828 90661103f0548cf993bff72c14c6cd57 275 SUPERFAMILY SSF46689 14 96 9.71E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4815 67360418a4ce94fb150ddf06db1bbf5e 139 Pfam PF03259 Roadblock/LC7 domain 8 101 1.8E-22 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain Amir_4815 67360418a4ce94fb150ddf06db1bbf5e 139 Gene3D G3DSA:3.30.450.30 5 132 1.0E-41 T 14-10-2018 Amir_4815 67360418a4ce94fb150ddf06db1bbf5e 139 SUPERFAMILY SSF103196 2 130 5.58E-33 T 14-10-2018 Amir_4815 67360418a4ce94fb150ddf06db1bbf5e 139 SMART SM00960 9 101 1.1E-25 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain Amir_6692 77ae01c330d0910d66afb958a5973e2d 311 Pfam PF05138 Phenylacetic acid catabolic protein 17 291 8.8E-102 T 14-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 Amir_6692 77ae01c330d0910d66afb958a5973e2d 311 Gene3D G3DSA:1.20.1260.10 2 309 4.3E-130 T 14-10-2018 IPR012347 Ferritin-like Amir_6692 77ae01c330d0910d66afb958a5973e2d 311 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 7 295 1.5E-150 T 14-10-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 Amir_6692 77ae01c330d0910d66afb958a5973e2d 311 SUPERFAMILY SSF47240 27 268 7.62E-81 T 14-10-2018 IPR009078 Ferritin-like superfamily Amir_0473 4bd2bd0ca882c1be6a54ccf311978dab 262 Pfam PF13242 HAD-hyrolase-like 177 250 1.8E-22 T 14-10-2018 Amir_0473 4bd2bd0ca882c1be6a54ccf311978dab 262 PIRSF PIRSF000915 4 255 1.4E-52 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Amir_0473 4bd2bd0ca882c1be6a54ccf311978dab 262 Gene3D G3DSA:3.40.50.1000 5 240 7.5E-77 T 14-10-2018 IPR023214 HAD superfamily Amir_0473 4bd2bd0ca882c1be6a54ccf311978dab 262 Gene3D G3DSA:3.40.50.1000 82 177 7.5E-77 T 14-10-2018 IPR023214 HAD superfamily Amir_0473 4bd2bd0ca882c1be6a54ccf311978dab 262 SUPERFAMILY SSF56784 5 251 3.31E-66 T 14-10-2018 IPR036412 HAD-like superfamily Amir_0473 4bd2bd0ca882c1be6a54ccf311978dab 262 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 104 1.2E-24 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Amir_0473 4bd2bd0ca882c1be6a54ccf311978dab 262 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 226 1.4E-46 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Amir_0173 2e6f868d3bcb493cb08fff486b340535 100 Pfam PF12728 Helix-turn-helix domain 40 86 3.0E-10 T 14-10-2018 Amir_0173 2e6f868d3bcb493cb08fff486b340535 100 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 40 86 1.5E-13 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Amir_2122 d3e414567607dfdd7a67eb9c9015182b 408 SUPERFAMILY SSF55931 32 382 3.04E-33 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amir_2122 d3e414567607dfdd7a67eb9c9015182b 408 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 82 329 2.2E-49 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Amir_2122 d3e414567607dfdd7a67eb9c9015182b 408 Gene3D G3DSA:3.30.590.20 13 407 4.5E-92 T 14-10-2018 Amir_2122 d3e414567607dfdd7a67eb9c9015182b 408 PIRSF PIRSF017901 13 408 3.9E-89 T 14-10-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Amir_2122 d3e414567607dfdd7a67eb9c9015182b 408 Hamap MF_02034 Glutamate--cysteine ligase EgtA [egtA]. 16 407 29.629 T 14-10-2018 IPR017809 Glutamate--cysteine ligase EgtA, Actinobacteria GO:0004357|GO:0052699 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Amir_3218 bb3f2baecf062606507411acca890f68 391 Gene3D G3DSA:3.30.565.10 262 388 4.7E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3218 bb3f2baecf062606507411acca890f68 391 Pfam PF07730 Histidine kinase 195 260 4.2E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_3218 bb3f2baecf062606507411acca890f68 391 SUPERFAMILY SSF55874 282 387 1.84E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3041 6738dbc4fb8824410c29e0626616705b 500 Gene3D G3DSA:3.40.50.300 260 497 2.8E-44 T 14-10-2018 Amir_3041 6738dbc4fb8824410c29e0626616705b 500 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_3041 6738dbc4fb8824410c29e0626616705b 500 SUPERFAMILY SSF52540 251 484 2.17E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3041 6738dbc4fb8824410c29e0626616705b 500 SMART SM00382 282 476 1.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3041 6738dbc4fb8824410c29e0626616705b 500 SMART SM00382 33 221 4.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_3041 6738dbc4fb8824410c29e0626616705b 500 Gene3D G3DSA:3.40.50.300 8 245 3.5E-58 T 14-10-2018 Amir_3041 6738dbc4fb8824410c29e0626616705b 500 SUPERFAMILY SSF52540 7 236 1.6E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3041 6738dbc4fb8824410c29e0626616705b 500 Pfam PF00005 ABC transporter 275 427 9.7E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3041 6738dbc4fb8824410c29e0626616705b 500 Pfam PF00005 ABC transporter 26 174 5.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4612 4a0075b7fa187bff1a9c206245ce186e 771 SUPERFAMILY SSF51445 62 362 2.84E-73 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_4612 4a0075b7fa187bff1a9c206245ce186e 771 PRINTS PR00133 Glycosyl hydrolase family 3 signature 159 175 2.4E-15 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4612 4a0075b7fa187bff1a9c206245ce186e 771 PRINTS PR00133 Glycosyl hydrolase family 3 signature 198 214 2.4E-15 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4612 4a0075b7fa187bff1a9c206245ce186e 771 PRINTS PR00133 Glycosyl hydrolase family 3 signature 90 106 2.4E-15 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4612 4a0075b7fa187bff1a9c206245ce186e 771 PRINTS PR00133 Glycosyl hydrolase family 3 signature 268 286 2.4E-15 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4612 4a0075b7fa187bff1a9c206245ce186e 771 PRINTS PR00133 Glycosyl hydrolase family 3 signature 113 132 2.4E-15 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_4612 4a0075b7fa187bff1a9c206245ce186e 771 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 401 632 2.4E-24 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 Amir_4612 4a0075b7fa187bff1a9c206245ce186e 771 Gene3D G3DSA:3.20.20.300 55 360 9.6E-84 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Amir_4612 4a0075b7fa187bff1a9c206245ce186e 771 SUPERFAMILY SSF52279 401 640 5.49E-23 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Amir_4612 4a0075b7fa187bff1a9c206245ce186e 771 Gene3D G3DSA:3.40.50.1700 387 641 1.7E-35 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Amir_4612 4a0075b7fa187bff1a9c206245ce186e 771 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 71 343 4.2E-57 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amir_0595 a46d3ecac46b6642e5300bc3d3c82c79 629 SUPERFAMILY SSF55874 21 183 3.27E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0595 a46d3ecac46b6642e5300bc3d3c82c79 629 Gene3D G3DSA:3.30.565.10 26 223 8.2E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0595 a46d3ecac46b6642e5300bc3d3c82c79 629 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 147 2.1E-19 T 14-10-2018 Amir_3181 b2c171504f61b35a8e72ad12d28aeb9a 259 Pfam PF00797 N-acetyltransferase 22 248 4.2E-44 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 Amir_3181 b2c171504f61b35a8e72ad12d28aeb9a 259 Gene3D G3DSA:3.30.2140.10 3 247 3.2E-52 T 14-10-2018 Amir_3181 b2c171504f61b35a8e72ad12d28aeb9a 259 SUPERFAMILY SSF54001 2 250 2.7E-56 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amir_3181 b2c171504f61b35a8e72ad12d28aeb9a 259 Gene3D G3DSA:2.40.128.150 89 184 3.2E-52 T 14-10-2018 Amir_6844 d3f33ec40c9f912c63ca6854ea71e60a 235 SMART SM00100 19 137 5.8E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_6844 d3f33ec40c9f912c63ca6854ea71e60a 235 Gene3D G3DSA:1.10.10.10 155 234 8.1E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6844 d3f33ec40c9f912c63ca6854ea71e60a 235 Pfam PF00027 Cyclic nucleotide-binding domain 38 123 4.1E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Amir_6844 d3f33ec40c9f912c63ca6854ea71e60a 235 Gene3D G3DSA:2.60.120.10 10 154 6.1E-27 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_6844 d3f33ec40c9f912c63ca6854ea71e60a 235 Pfam PF13545 Crp-like helix-turn-helix domain 157 231 2.5E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amir_6844 d3f33ec40c9f912c63ca6854ea71e60a 235 SUPERFAMILY SSF51206 15 149 3.01E-22 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Amir_6844 d3f33ec40c9f912c63ca6854ea71e60a 235 SUPERFAMILY SSF46785 155 233 2.63E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5211 3e71a55d610b9f07bfd3f374c2346e6e 165 Gene3D G3DSA:3.40.50.450 6 151 1.2E-6 T 14-10-2018 Amir_5211 3e71a55d610b9f07bfd3f374c2346e6e 165 SUPERFAMILY SSF102405 2 160 7.87E-15 T 14-10-2018 Amir_3829 7f10bf8e7612bef66cc2b7a68543843d 264 SUPERFAMILY SSF53335 10 205 6.35E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3829 7f10bf8e7612bef66cc2b7a68543843d 264 Pfam PF08241 Methyltransferase domain 48 136 1.5E-13 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_3829 7f10bf8e7612bef66cc2b7a68543843d 264 Gene3D G3DSA:3.40.50.150 3 263 2.2E-28 T 14-10-2018 Amir_3231 10126ca4087771252b91f949498e32a3 540 Pfam PF03814 Potassium-transporting ATPase A subunit 13 539 1.4E-214 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Amir_3231 10126ca4087771252b91f949498e32a3 540 PIRSF PIRSF001294 3 540 2.2E-203 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Amir_3231 10126ca4087771252b91f949498e32a3 540 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 4 540 31.52 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Amir_3231 10126ca4087771252b91f949498e32a3 540 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 6 539 8.2E-197 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Amir_6474 d91bb6bd55f3e82f84acc781cbe9a7cb 102 Gene3D G3DSA:3.30.460.10 1 97 1.6E-17 T 14-10-2018 Amir_6474 d91bb6bd55f3e82f84acc781cbe9a7cb 102 SUPERFAMILY SSF81301 8 100 3.02E-11 T 14-10-2018 Amir_6474 d91bb6bd55f3e82f84acc781cbe9a7cb 102 Pfam PF01909 Nucleotidyltransferase domain 12 96 1.9E-9 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Amir_7040 ed71c7ec8f886b591821c4623383de13 168 SUPERFAMILY SSF50249 6 168 4.21E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amir_7040 ed71c7ec8f886b591821c4623383de13 168 Hamap MF_00984 Single-stranded DNA-binding protein. 4 113 30.33 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Amir_7040 ed71c7ec8f886b591821c4623383de13 168 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 5 168 1.4E-33 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Amir_7040 ed71c7ec8f886b591821c4623383de13 168 Gene3D G3DSA:2.40.50.140 1 120 1.4E-42 T 14-10-2018 Amir_7040 ed71c7ec8f886b591821c4623383de13 168 Pfam PF00436 Single-strand binding protein family 6 106 1.7E-29 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Amir_0775 43a6ba723df96c0b91689b0bd2313d61 180 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 5 179 5.5E-55 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG Amir_0775 43a6ba723df96c0b91689b0bd2313d61 180 Gene3D G3DSA:3.40.50.450 1 180 9.4E-62 T 14-10-2018 Amir_0775 43a6ba723df96c0b91689b0bd2313d61 180 Pfam PF03641 Possible lysine decarboxylase 48 177 9.0E-35 T 14-10-2018 IPR031100 LOG family Amir_0775 43a6ba723df96c0b91689b0bd2313d61 180 SUPERFAMILY SSF102405 4 177 2.9E-51 T 14-10-2018 Amir_4155 9d6bb40cde9f6de9b4e3c26f2773f506 309 Gene3D G3DSA:3.40.50.1110 46 307 1.0E-29 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_4155 9d6bb40cde9f6de9b4e3c26f2773f506 309 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 53 297 1.6E-19 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_4155 9d6bb40cde9f6de9b4e3c26f2773f506 309 SUPERFAMILY SSF52266 50 307 6.16E-25 T 14-10-2018 Amir_4349 232ba7d5ef3c99a523219ea5972b24a7 202 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 15 190 1.5E-30 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT Amir_6637 1e40951f8747a7d7a826a801152acef7 184 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 24.951 T 14-10-2018 IPR022973 Ribosomal protein L10 Amir_6637 1e40951f8747a7d7a826a801152acef7 184 Gene3D G3DSA:3.30.70.1730 2 152 7.7E-37 T 14-10-2018 Amir_6637 1e40951f8747a7d7a826a801152acef7 184 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 66 150 0.008 T 14-10-2018 Amir_6637 1e40951f8747a7d7a826a801152acef7 184 SUPERFAMILY SSF160369 1 169 5.23E-51 T 14-10-2018 Amir_6637 1e40951f8747a7d7a826a801152acef7 184 Pfam PF00466 Ribosomal protein L10 2 98 5.1E-24 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Amir_3625 df89a23151aae288ac82d893f5aa8132 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3625 df89a23151aae288ac82d893f5aa8132 309 Gene3D G3DSA:1.10.10.10 1 87 7.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3625 df89a23151aae288ac82d893f5aa8132 309 SUPERFAMILY SSF46785 2 89 6.12E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3625 df89a23151aae288ac82d893f5aa8132 309 SUPERFAMILY SSF53850 102 285 4.34E-11 T 14-10-2018 Amir_3625 df89a23151aae288ac82d893f5aa8132 309 Gene3D G3DSA:3.40.190.10 103 161 1.3E-8 T 14-10-2018 Amir_3625 df89a23151aae288ac82d893f5aa8132 309 Gene3D G3DSA:3.40.190.10 162 196 1.3E-8 T 14-10-2018 Amir_3625 df89a23151aae288ac82d893f5aa8132 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3625 df89a23151aae288ac82d893f5aa8132 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3625 df89a23151aae288ac82d893f5aa8132 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amir_3625 df89a23151aae288ac82d893f5aa8132 309 Pfam PF03466 LysR substrate binding domain 102 222 4.8E-8 T 14-10-2018 IPR005119 LysR, substrate-binding Amir_1751 8254a78271c3580614b3f7f97085d0d9 420 SUPERFAMILY SSF103473 19 399 7.72E-39 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_1751 8254a78271c3580614b3f7f97085d0d9 420 Gene3D G3DSA:1.20.1250.20 17 399 3.0E-31 T 14-10-2018 Amir_1751 8254a78271c3580614b3f7f97085d0d9 420 Pfam PF07690 Major Facilitator Superfamily 27 358 2.9E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2018 446a01d644b21c02055cb1900ced2bc1 139 TIGRFAM TIGR02611 TIGR02611: TIGR02611 family protein 14 122 4.3E-32 T 14-10-2018 IPR013434 Conserved hypothetical protein CHP02611 Amir_2018 446a01d644b21c02055cb1900ced2bc1 139 Pfam PF09656 Putative transmembrane protein (PGPGW) 27 78 5.1E-23 T 14-10-2018 IPR019099 Uncharacterised protein family PGPGW, transmembrane Amir_1935 3be8fe71455716d12aaba230235fb732 144 Gene3D G3DSA:3.40.50.620 1 143 4.0E-38 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_1935 3be8fe71455716d12aaba230235fb732 144 PRINTS PR01438 Universal stress protein signature 97 109 1.3E-17 T 14-10-2018 IPR006015 Universal stress protein A Amir_1935 3be8fe71455716d12aaba230235fb732 144 PRINTS PR01438 Universal stress protein signature 115 137 1.3E-17 T 14-10-2018 IPR006015 Universal stress protein A Amir_1935 3be8fe71455716d12aaba230235fb732 144 PRINTS PR01438 Universal stress protein signature 2 20 1.3E-17 T 14-10-2018 IPR006015 Universal stress protein A Amir_1935 3be8fe71455716d12aaba230235fb732 144 Pfam PF00582 Universal stress protein family 3 137 2.4E-28 T 14-10-2018 IPR006016 UspA Amir_1935 3be8fe71455716d12aaba230235fb732 144 SUPERFAMILY SSF52402 3 139 1.34E-33 T 14-10-2018 Amir_4850 53346061c0409c2f3719315658c993e1 204 Gene3D G3DSA:3.10.129.10 23 168 4.3E-37 T 14-10-2018 Amir_4850 53346061c0409c2f3719315658c993e1 204 SUPERFAMILY SSF54637 30 165 1.82E-28 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_4850 53346061c0409c2f3719315658c993e1 204 Pfam PF01575 MaoC like domain 31 133 3.6E-19 T 14-10-2018 IPR002539 MaoC-like dehydratase domain Amir_6955 d42bda96936bf492740e9b716d054a72 396 Gene3D G3DSA:2.60.40.10 26 118 4.8E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_6955 d42bda96936bf492740e9b716d054a72 396 Pfam PF17210 SdrD B-like domain 28 100 4.8E-7 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_6955 d42bda96936bf492740e9b716d054a72 396 SUPERFAMILY SSF117074 26 85 1.07E-10 T 14-10-2018 Amir_6727 deeccecda18cadcf9c12505e470b89d2 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 241 257 4.9E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amir_6727 deeccecda18cadcf9c12505e470b89d2 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 152 171 4.9E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amir_6727 deeccecda18cadcf9c12505e470b89d2 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 190 209 4.9E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amir_6727 deeccecda18cadcf9c12505e470b89d2 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 296 315 4.9E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amir_6727 deeccecda18cadcf9c12505e470b89d2 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 4.9E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amir_6727 deeccecda18cadcf9c12505e470b89d2 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 266 281 4.9E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amir_6727 deeccecda18cadcf9c12505e470b89d2 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 5 321 2.8E-136 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amir_6727 deeccecda18cadcf9c12505e470b89d2 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 241 253 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amir_6727 deeccecda18cadcf9c12505e470b89d2 324 SUPERFAMILY SSF51569 2 323 1.36E-129 T 14-10-2018 Amir_6727 deeccecda18cadcf9c12505e470b89d2 324 PIRSF PIRSF001415 1 324 2.0E-143 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amir_6727 deeccecda18cadcf9c12505e470b89d2 324 SMART SM01004 2 322 4.5E-214 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amir_6727 deeccecda18cadcf9c12505e470b89d2 324 Gene3D G3DSA:3.20.20.70 1 324 6.0E-135 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_6602 9c69b74aa66b956b9770e4385bd6906b 187 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 8 186 42.823 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6602 9c69b74aa66b956b9770e4385bd6906b 187 Gene3D G3DSA:3.30.1440.10 6 186 1.4E-76 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6602 9c69b74aa66b956b9770e4385bd6906b 187 PIRSF PIRSF002161 4 187 3.8E-61 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6602 9c69b74aa66b956b9770e4385bd6906b 187 Pfam PF00281 Ribosomal protein L5 31 87 9.5E-25 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6602 9c69b74aa66b956b9770e4385bd6906b 187 Pfam PF00673 ribosomal L5P family C-terminus 91 184 1.0E-38 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6602 9c69b74aa66b956b9770e4385bd6906b 187 SUPERFAMILY SSF55282 10 185 5.42E-73 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_1587 df297bfab6501b359c2bd21135e0d06a 461 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 61 447 1.7E-136 T 14-10-2018 IPR018721 Protein of unknown function DUF2252 Amir_4333 794964d4bb85cc49d8abfd7e5c21df86 597 SUPERFAMILY SSF51905 33 594 3.59E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4333 794964d4bb85cc49d8abfd7e5c21df86 597 Pfam PF00890 FAD binding domain 45 578 3.1E-98 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_4333 794964d4bb85cc49d8abfd7e5c21df86 597 PIRSF PIRSF036654 39 596 1.1E-266 T 14-10-2018 IPR014614 Uncharacterised conserved protein UCP036654 GO:0016627|GO:0055114 Amir_2169 1fd589c142aa3f35a962e529629d3fc8 337 SUPERFAMILY SSF47413 1 58 7.6E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2169 1fd589c142aa3f35a962e529629d3fc8 337 Pfam PF13377 Periplasmic binding protein-like domain 168 330 4.4E-30 T 14-10-2018 Amir_2169 1fd589c142aa3f35a962e529629d3fc8 337 Gene3D G3DSA:1.10.260.40 1 55 4.2E-21 T 14-10-2018 Amir_2169 1fd589c142aa3f35a962e529629d3fc8 337 SMART SM00354 1 71 2.8E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_2169 1fd589c142aa3f35a962e529629d3fc8 337 Gene3D G3DSA:3.40.50.2300 160 291 9.5E-44 T 14-10-2018 Amir_2169 1fd589c142aa3f35a962e529629d3fc8 337 SUPERFAMILY SSF53822 60 323 2.94E-37 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_2169 1fd589c142aa3f35a962e529629d3fc8 337 Gene3D G3DSA:3.40.50.2300 56 308 9.5E-44 T 14-10-2018 Amir_2169 1fd589c142aa3f35a962e529629d3fc8 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 2.9E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1881 155a5d2a237af01228dc19ec5e0b1971 260 Pfam PF00072 Response regulator receiver domain 52 161 4.4E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1881 155a5d2a237af01228dc19ec5e0b1971 260 SUPERFAMILY SSF46894 185 256 4.08E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_1881 155a5d2a237af01228dc19ec5e0b1971 260 Gene3D G3DSA:3.40.50.2300 48 190 2.7E-14 T 14-10-2018 Amir_1881 155a5d2a237af01228dc19ec5e0b1971 260 Pfam PF00196 Bacterial regulatory proteins, luxR family 189 231 9.5E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1881 155a5d2a237af01228dc19ec5e0b1971 260 SMART SM00448 49 161 1.2E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_1881 155a5d2a237af01228dc19ec5e0b1971 260 Gene3D G3DSA:1.10.10.10 191 255 3.9E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1881 155a5d2a237af01228dc19ec5e0b1971 260 SMART SM00421 187 244 0.0018 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amir_1881 155a5d2a237af01228dc19ec5e0b1971 260 SUPERFAMILY SSF52172 49 176 5.83E-16 T 14-10-2018 IPR011006 CheY-like superfamily Amir_1722 3e216bf62290947bd6e2aebdd8e84229 641 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 67 224 4.8E-32 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Amir_1310 58401fd9a2c7621eedaf0e434af4f84a 114 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 109 9.4E-25 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Amir_1310 58401fd9a2c7621eedaf0e434af4f84a 114 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 114 18.77 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Amir_5224 421516cbfacf564dc0c40a2d22aedc7d 310 Pfam PF02911 Formyl transferase, C-terminal domain 204 301 1.5E-21 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amir_5224 421516cbfacf564dc0c40a2d22aedc7d 310 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 303 2.8E-65 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Amir_5224 421516cbfacf564dc0c40a2d22aedc7d 310 SUPERFAMILY SSF53328 2 204 3.4E-53 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amir_5224 421516cbfacf564dc0c40a2d22aedc7d 310 Gene3D G3DSA:3.40.50.12230 1 309 1.4E-86 T 14-10-2018 Amir_5224 421516cbfacf564dc0c40a2d22aedc7d 310 Pfam PF00551 Formyl transferase 8 180 6.2E-31 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amir_5224 421516cbfacf564dc0c40a2d22aedc7d 310 SUPERFAMILY SSF50486 205 308 3.14E-25 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Amir_5224 421516cbfacf564dc0c40a2d22aedc7d 310 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 304 30.961 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Amir_1781 76fd3edfd4c6c9b2cfa85044df64dccb 516 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 215 4.5E-51 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Amir_1781 76fd3edfd4c6c9b2cfa85044df64dccb 516 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 277 481 8.6E-38 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Amir_1781 76fd3edfd4c6c9b2cfa85044df64dccb 516 SUPERFAMILY SSF53790 272 509 1.22E-53 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amir_1781 76fd3edfd4c6c9b2cfa85044df64dccb 516 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 3 231 1.2E-65 T 14-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 Amir_1781 76fd3edfd4c6c9b2cfa85044df64dccb 516 Gene3D G3DSA:3.30.950.10 133 247 1.6E-15 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Amir_1781 76fd3edfd4c6c9b2cfa85044df64dccb 516 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 277 513 8.0E-84 T 14-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 Amir_1781 76fd3edfd4c6c9b2cfa85044df64dccb 516 SUPERFAMILY SSF53790 1 236 5.37E-49 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amir_1781 76fd3edfd4c6c9b2cfa85044df64dccb 516 Gene3D G3DSA:3.40.1010.10 270 383 1.8E-26 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amir_1781 76fd3edfd4c6c9b2cfa85044df64dccb 516 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 98 130 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Amir_1781 76fd3edfd4c6c9b2cfa85044df64dccb 516 Gene3D G3DSA:3.40.1010.10 1 132 6.4E-33 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amir_1781 76fd3edfd4c6c9b2cfa85044df64dccb 516 Gene3D G3DSA:3.30.950.10 384 515 9.4E-52 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Amir_1993 cd220277600196f4e5d4cbc730cb97ee 137 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 16 131 3.6E-34 T 14-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III Amir_5537 8efdea430945e23441bd6c116379f7a2 385 Pfam PF02653 Branched-chain amino acid transport system / permease component 68 341 3.3E-51 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amir_4873 397a2ab3210990ff0d7a62202dde3d9d 193 SUPERFAMILY SSF46689 3 75 1.33E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4873 397a2ab3210990ff0d7a62202dde3d9d 193 Gene3D G3DSA:1.10.357.10 12 191 2.9E-38 T 14-10-2018 Amir_4873 397a2ab3210990ff0d7a62202dde3d9d 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 1.5E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4873 397a2ab3210990ff0d7a62202dde3d9d 193 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 123 178 4.7E-8 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal Amir_4873 397a2ab3210990ff0d7a62202dde3d9d 193 SUPERFAMILY SSF48498 90 191 4.2E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4873 397a2ab3210990ff0d7a62202dde3d9d 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4873 397a2ab3210990ff0d7a62202dde3d9d 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 2.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_6536 ba4389eb70f0565aaab39aa427a3f5a2 131 Pfam PF17252 Family of unknown function (DUF5319) 5 125 9.0E-50 T 14-10-2018 IPR035165 Protein of unknown function DUF5319 Amir_6536 ba4389eb70f0565aaab39aa427a3f5a2 131 ProDom PD032647 MB3446 ML0386 RV3412/MT3521 CGL0602 8 122 7.0E-33 T 14-10-2018 IPR035165 Protein of unknown function DUF5319 Amir_1228 a6aae167ee781c6661739bca25288a95 112 SUPERFAMILY SSF52038 18 101 9.29E-20 T 14-10-2018 IPR035905 Barstar-like superfamily Amir_1228 a6aae167ee781c6661739bca25288a95 112 Pfam PF01337 Barstar (barnase inhibitor) 19 99 1.6E-20 T 14-10-2018 IPR000468 Barstar (barnase inhibitor) Amir_1228 a6aae167ee781c6661739bca25288a95 112 Gene3D G3DSA:3.30.370.10 16 106 3.2E-12 T 14-10-2018 IPR035905 Barstar-like superfamily Amir_0972 28c5837233c61b3619e8578c0fc71a7d 276 Gene3D G3DSA:1.10.3720.10 1 263 6.1E-65 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0972 28c5837233c61b3619e8578c0fc71a7d 276 SUPERFAMILY SSF161098 4 276 2.07E-72 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0972 28c5837233c61b3619e8578c0fc71a7d 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 268 2.9E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_2213 5eb6a8db564b742db685d7a54c4e5bf7 225 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 202 222 3.5E-10 T 14-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 Amir_0971 ec4b21a45cc1d6f361cced76545c79b2 318 SUPERFAMILY SSF161098 72 300 1.11E-49 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0971 ec4b21a45cc1d6f361cced76545c79b2 318 Gene3D G3DSA:1.10.3720.10 68 310 1.5E-61 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0971 ec4b21a45cc1d6f361cced76545c79b2 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 307 2.0E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0971 ec4b21a45cc1d6f361cced76545c79b2 318 SUPERFAMILY SSF160964 29 63 5.23E-5 T 14-10-2018 Amir_4740 fed68bc202617a87c7b4e3dbe84cf86c 282 Pfam PF14062 Domain of unknown function (DUF4253) 172 282 4.2E-33 T 14-10-2018 IPR025349 Domain of unknown function DUF4253 Amir_3356 518c979827b0b0653e121ea15e1ae6af 426 Gene3D G3DSA:3.30.565.10 231 352 9.2E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3356 518c979827b0b0653e121ea15e1ae6af 426 Pfam PF13581 Histidine kinase-like ATPase domain 241 322 2.0E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_3356 518c979827b0b0653e121ea15e1ae6af 426 SUPERFAMILY SSF55874 240 348 2.87E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3356 518c979827b0b0653e121ea15e1ae6af 426 Pfam PF07730 Histidine kinase 154 220 9.9E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_3356 518c979827b0b0653e121ea15e1ae6af 426 SMART SM00387 267 371 5.3E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_2212 381e1117c2fe6081cdb53b39e17de633 220 Gene3D G3DSA:1.10.150.240 19 88 9.4E-50 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Amir_2212 381e1117c2fe6081cdb53b39e17de633 220 Gene3D G3DSA:3.40.50.1000 6 199 9.4E-50 T 14-10-2018 IPR023214 HAD superfamily Amir_2212 381e1117c2fe6081cdb53b39e17de633 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 189 2.4E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_2212 381e1117c2fe6081cdb53b39e17de633 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 189 2.8E-25 T 14-10-2018 Amir_2212 381e1117c2fe6081cdb53b39e17de633 220 SUPERFAMILY SSF56784 6 192 1.73E-45 T 14-10-2018 IPR036412 HAD-like superfamily Amir_0835 b6b6118922f435853e19b057b424f1a3 677 Gene3D G3DSA:3.40.228.10 134 329 5.1E-147 T 14-10-2018 Amir_0835 b6b6118922f435853e19b057b424f1a3 677 Pfam PF01568 Molydopterin dinucleotide binding domain 565 671 6.3E-25 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Amir_0835 b6b6118922f435853e19b057b424f1a3 677 SMART SM00926 1 47 6.6E-4 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_0835 b6b6118922f435853e19b057b424f1a3 677 Gene3D G3DSA:2.20.25.90 1 47 4.6E-6 T 14-10-2018 Amir_0835 b6b6118922f435853e19b057b424f1a3 677 SUPERFAMILY SSF50692 530 676 1.08E-42 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Amir_0835 b6b6118922f435853e19b057b424f1a3 677 Pfam PF00384 Molybdopterin oxidoreductase 50 476 1.9E-70 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_0835 b6b6118922f435853e19b057b424f1a3 677 Gene3D G3DSA:2.40.40.20 554 677 9.7E-40 T 14-10-2018 Amir_0835 b6b6118922f435853e19b057b424f1a3 677 Gene3D G3DSA:3.40.50.740 65 524 5.1E-147 T 14-10-2018 Amir_0835 b6b6118922f435853e19b057b424f1a3 677 SUPERFAMILY SSF53706 2 565 1.27E-157 T 14-10-2018 Amir_5592 60ccb0a7d703c8e2828a7de0dd4c6b2e 752 Gene3D G3DSA:3.40.50.300 297 565 5.7E-13 T 14-10-2018 Amir_5592 60ccb0a7d703c8e2828a7de0dd4c6b2e 752 SUPERFAMILY SSF52540 309 509 2.5E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0408 9140ca10218865f12b991b2953cf59c9 335 Gene3D G3DSA:3.30.9.10 85 292 6.7E-60 T 14-10-2018 Amir_0408 9140ca10218865f12b991b2953cf59c9 335 Pfam PF01266 FAD dependent oxidoreductase 6 330 4.9E-44 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Amir_0408 9140ca10218865f12b991b2953cf59c9 335 SUPERFAMILY SSF51905 4 332 1.68E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0408 9140ca10218865f12b991b2953cf59c9 335 SUPERFAMILY SSF54373 198 291 1.57E-11 T 14-10-2018 Amir_0408 9140ca10218865f12b991b2953cf59c9 335 Gene3D G3DSA:3.50.50.60 6 330 6.7E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_0408 9140ca10218865f12b991b2953cf59c9 335 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 6 331 1.8E-82 T 14-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 Amir_6874 d301c14cd0800f0730c116464502753f 282 Gene3D G3DSA:3.20.20.80 75 282 1.3E-77 T 14-10-2018 Amir_6874 d301c14cd0800f0730c116464502753f 282 SUPERFAMILY SSF51445 77 280 4.63E-59 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_6874 d301c14cd0800f0730c116464502753f 282 Pfam PF01183 Glycosyl hydrolases family 25 80 264 5.6E-47 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 Amir_6874 d301c14cd0800f0730c116464502753f 282 ProSitePatterns PS00953 Glycosyl hydrolases family 25 active sites signature. 81 114 - T 14-10-2018 IPR008270 Glycoside hydrolase, family 25, active site GO:0003796|GO:0009253|GO:0016998 Amir_6874 d301c14cd0800f0730c116464502753f 282 SMART SM00641 77 186 7.1E-38 T 14-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup Amir_0515 61d98f4ade0523061786867afd436ae8 271 Pfam PF11268 Protein of unknown function (DUF3071) 1 169 9.2E-62 T 14-10-2018 IPR021421 Protein of unknown function DUF3071 Amir_0615 7efa4c47771441fc0acc2b4d5fd57b0c 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 297 1.9E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0615 7efa4c47771441fc0acc2b4d5fd57b0c 302 Gene3D G3DSA:1.10.3720.10 59 299 1.1E-59 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0615 7efa4c47771441fc0acc2b4d5fd57b0c 302 SUPERFAMILY SSF161098 65 288 1.96E-50 T 14-10-2018 IPR035906 MetI-like superfamily Amir_5030 d40c5a794abe51f8151f5044d356a5d0 391 Pfam PF03601 Conserved hypothetical protein 698 58 370 1.4E-47 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 Amir_0215 938b53e2f64cd429f4ddf60a273d8c03 210 Gene3D G3DSA:3.40.109.10 15 201 4.0E-45 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_0215 938b53e2f64cd429f4ddf60a273d8c03 210 SUPERFAMILY SSF55469 18 199 7.85E-40 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_0215 938b53e2f64cd429f4ddf60a273d8c03 210 Pfam PF00881 Nitroreductase family 22 164 2.2E-17 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amir_5308 16a053bf0bcf8d8eb42c5fc358f6e65a 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 280 3.8E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_5308 16a053bf0bcf8d8eb42c5fc358f6e65a 294 SUPERFAMILY SSF161098 52 277 5.76E-53 T 14-10-2018 IPR035906 MetI-like superfamily Amir_5308 16a053bf0bcf8d8eb42c5fc358f6e65a 294 Gene3D G3DSA:1.10.3720.10 48 289 1.5E-58 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3595 757d3233bc69bdecd375dbe1ca3203c4 529 Gene3D G3DSA:1.10.10.2840 374 506 2.0E-20 T 14-10-2018 Amir_3595 757d3233bc69bdecd375dbe1ca3203c4 529 Pfam PF13556 PucR C-terminal helix-turn-helix domain 446 503 1.1E-18 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Amir_0364 a5ed18d72e2a4e4299428dc9a98dd363 162 SMART SM01058 2 112 1.6E-32 T 14-10-2018 IPR003711 CarD-like/TRCF domain Amir_0364 a5ed18d72e2a4e4299428dc9a98dd363 162 Gene3D G3DSA:2.30.30.840 1 60 4.6E-26 T 14-10-2018 Amir_0364 a5ed18d72e2a4e4299428dc9a98dd363 162 Gene3D G3DSA:1.20.58.1290 61 162 1.1E-39 T 14-10-2018 Amir_0364 a5ed18d72e2a4e4299428dc9a98dd363 162 Pfam PF02559 CarD-like/TRCF domain 3 111 1.3E-18 T 14-10-2018 IPR003711 CarD-like/TRCF domain Amir_0364 a5ed18d72e2a4e4299428dc9a98dd363 162 SUPERFAMILY SSF141259 3 66 3.4E-14 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily Amir_2854 281016eb73e5f61fda197c540336bab4 367 Pfam PF13416 Bacterial extracellular solute-binding protein 62 329 8.1E-25 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_2854 281016eb73e5f61fda197c540336bab4 367 SUPERFAMILY SSF53850 43 361 4.95E-37 T 14-10-2018 Amir_2854 281016eb73e5f61fda197c540336bab4 367 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 33 0.0012 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Amir_2854 281016eb73e5f61fda197c540336bab4 367 Gene3D G3DSA:3.40.190.10 58 330 3.1E-42 T 14-10-2018 Amir_2854 281016eb73e5f61fda197c540336bab4 367 Gene3D G3DSA:3.40.190.10 149 345 3.1E-42 T 14-10-2018 Amir_6923 0d60607a2ed4bc8373245db68a766271 299 Gene3D G3DSA:3.30.420.40 127 278 4.2E-71 T 14-10-2018 Amir_6923 0d60607a2ed4bc8373245db68a766271 299 SUPERFAMILY SSF53067 1 297 1.21E-51 T 14-10-2018 Amir_6923 0d60607a2ed4bc8373245db68a766271 299 Pfam PF00480 ROK family 2 294 3.5E-50 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amir_6923 0d60607a2ed4bc8373245db68a766271 299 Gene3D G3DSA:3.30.420.40 2 291 4.2E-71 T 14-10-2018 Amir_0240 67261fa230b7833d51493ee29c20986b 51 Pfam PF13783 Domain of unknown function (DUF4177) 4 39 1.7E-6 T 14-10-2018 IPR025234 Protein of unknown function DUF4177 Amir_6177 9950431f6851993596804d1d3c329e5d 375 SUPERFAMILY SSF55469 165 371 2.28E-21 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_6177 9950431f6851993596804d1d3c329e5d 375 Pfam PF00881 Nitroreductase family 169 352 3.6E-18 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amir_6177 9950431f6851993596804d1d3c329e5d 375 Gene3D G3DSA:3.40.109.10 135 370 1.8E-55 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_6177 9950431f6851993596804d1d3c329e5d 375 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 183 349 2.6E-30 T 14-10-2018 IPR020051 SagB-type dehydrogenase domain Amir_0270 0632ffdc902726dfbb22505a6159e07a 717 Pfam PF00144 Beta-lactamase 247 579 2.3E-67 T 14-10-2018 IPR001466 Beta-lactamase-related Amir_0270 0632ffdc902726dfbb22505a6159e07a 717 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 262 276 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amir_0270 0632ffdc902726dfbb22505a6159e07a 717 SUPERFAMILY SSF56601 246 586 1.86E-81 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_0270 0632ffdc902726dfbb22505a6159e07a 717 Gene3D G3DSA:3.40.710.10 230 580 1.5E-84 T 14-10-2018 Amir_0419 968e46966b94e6b53696de938f1c7837 217 SUPERFAMILY SSF46689 23 95 2.34E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0419 968e46966b94e6b53696de938f1c7837 217 SUPERFAMILY SSF48498 101 215 4.73E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_0419 968e46966b94e6b53696de938f1c7837 217 Gene3D G3DSA:1.10.357.10 91 216 5.6E-19 T 14-10-2018 Amir_0419 968e46966b94e6b53696de938f1c7837 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 46 7.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0419 968e46966b94e6b53696de938f1c7837 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 54 77 7.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0419 968e46966b94e6b53696de938f1c7837 217 Gene3D G3DSA:1.10.10.60 21 85 4.4E-21 T 14-10-2018 Amir_0419 968e46966b94e6b53696de938f1c7837 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 79 4.1E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4534 47c506be4084d079467eaa4dc4965eee 331 Gene3D G3DSA:3.40.50.720 2 121 4.5E-29 T 14-10-2018 Amir_4534 47c506be4084d079467eaa4dc4965eee 331 SUPERFAMILY SSF51735 5 153 9.12E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4534 47c506be4084d079467eaa4dc4965eee 331 Gene3D G3DSA:3.30.360.10 128 320 4.6E-26 T 14-10-2018 Amir_4534 47c506be4084d079467eaa4dc4965eee 331 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 119 9.5E-17 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amir_4534 47c506be4084d079467eaa4dc4965eee 331 SUPERFAMILY SSF55347 128 294 7.19E-25 T 14-10-2018 Amir_3449 6ae2a00773140e334b84bf93624c32fc 193 Gene3D G3DSA:3.40.430.10 2 191 1.8E-30 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_3449 6ae2a00773140e334b84bf93624c32fc 193 SUPERFAMILY SSF53597 4 192 1.42E-19 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_3449 6ae2a00773140e334b84bf93624c32fc 193 Pfam PF01872 RibD C-terminal domain 111 170 6.2E-7 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Amir_6694 4de645fbc8c017999d2bf2833ec392be 413 SUPERFAMILY SSF56322 40 411 6.28E-77 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Amir_6694 4de645fbc8c017999d2bf2833ec392be 413 Gene3D G3DSA:3.60.120.10 52 412 5.5E-86 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Amir_6694 4de645fbc8c017999d2bf2833ec392be 413 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 150 410 4.0E-68 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 Amir_6694 4de645fbc8c017999d2bf2833ec392be 413 Pfam PF00425 chorismate binding enzyme 161 402 1.8E-62 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Amir_1452 db5a4bd01e401f4e0d11f15abe55cb2f 269 Pfam PF12787 EcsC protein family 47 209 9.3E-14 T 14-10-2018 IPR024787 EcsC protein Amir_1096 e34db77174b00d9baa077705b18f4d14 525 SUPERFAMILY SSF51338 3 520 5.4E-17 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_1096 e34db77174b00d9baa077705b18f4d14 525 Gene3D G3DSA:3.20.20.140 58 478 6.7E-112 T 14-10-2018 Amir_1096 e34db77174b00d9baa077705b18f4d14 525 Gene3D G3DSA:2.30.40.10 9 495 6.7E-112 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_1096 e34db77174b00d9baa077705b18f4d14 525 SUPERFAMILY SSF51556 57 479 9.72E-29 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_1096 e34db77174b00d9baa077705b18f4d14 525 Pfam PF07969 Amidohydrolase family 46 517 8.8E-79 T 14-10-2018 IPR013108 Amidohydrolase 3 Amir_1096 e34db77174b00d9baa077705b18f4d14 525 Gene3D G3DSA:3.10.310.70 76 181 6.7E-112 T 14-10-2018 Amir_3678 192be907cdae93b404183fb34502cf39 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 247 3.2E-46 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_3678 192be907cdae93b404183fb34502cf39 329 SUPERFAMILY SSF51735 1 318 4.24E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3678 192be907cdae93b404183fb34502cf39 329 Gene3D G3DSA:3.40.50.720 6 300 4.4E-86 T 14-10-2018 Amir_3678 192be907cdae93b404183fb34502cf39 329 Gene3D G3DSA:3.90.25.10 76 313 4.4E-86 T 14-10-2018 Amir_0769 81a5b3dec1436fa17c9aae481440ebe1 277 Pfam PF00583 Acetyltransferase (GNAT) family 199 263 3.2E-12 T 14-10-2018 IPR000182 GNAT domain Amir_0769 81a5b3dec1436fa17c9aae481440ebe1 277 Gene3D G3DSA:3.40.630.30 16 275 2.1E-18 T 14-10-2018 Amir_0769 81a5b3dec1436fa17c9aae481440ebe1 277 SUPERFAMILY SSF55729 161 273 1.89E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_3208 b7940ec632e0e9e4b439136f226f3b03 204 Gene3D G3DSA:1.10.357.10 6 193 1.8E-53 T 14-10-2018 Amir_3208 b7940ec632e0e9e4b439136f226f3b03 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 55 3.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3208 b7940ec632e0e9e4b439136f226f3b03 204 SUPERFAMILY SSF46689 2 69 8.72E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2860 ac2e5a134ca3d0bc6398e1cd73ca02a5 245 Gene3D G3DSA:3.10.180.10 9 137 1.4E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_2860 ac2e5a134ca3d0bc6398e1cd73ca02a5 245 SUPERFAMILY SSF54593 13 132 1.57E-12 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_6469 23e69cbae83ba8f233d92df204f8bbc9 339 PIRSF PIRSF035875 8 307 4.2E-31 T 14-10-2018 IPR017039 Virulence factor BrkB Amir_6469 23e69cbae83ba8f233d92df204f8bbc9 339 Pfam PF03631 Virulence factor BrkB 38 291 3.4E-44 T 14-10-2018 IPR017039 Virulence factor BrkB Amir_6469 23e69cbae83ba8f233d92df204f8bbc9 339 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 24 290 1.9E-66 T 14-10-2018 IPR005274 Inner membrane protein YhjD Amir_6838 c6af8fa42fad97f77792a8e5f970414c 266 Pfam PF05853 beta-keto acid cleavage enzyme 2 259 1.3E-50 T 14-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 Amir_6838 c6af8fa42fad97f77792a8e5f970414c 266 Gene3D G3DSA:3.20.20.70 1 265 2.3E-53 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_2652 3cb935a8bc312e5f7ab0df59daabecba 230 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 22 218 1.4E-20 T 14-10-2018 IPR010179 CRISPR-associated protein Cse3 Amir_2652 3cb935a8bc312e5f7ab0df59daabecba 230 SMART SM01101 1 218 1.4E-66 T 14-10-2018 IPR010179 CRISPR-associated protein Cse3 Amir_2652 3cb935a8bc312e5f7ab0df59daabecba 230 SUPERFAMILY SSF117987 1 78 1.2E-19 T 14-10-2018 Amir_2652 3cb935a8bc312e5f7ab0df59daabecba 230 Pfam PF08798 CRISPR associated protein 2 218 2.1E-58 T 14-10-2018 IPR010179 CRISPR-associated protein Cse3 Amir_2652 3cb935a8bc312e5f7ab0df59daabecba 230 SUPERFAMILY SSF117987 95 218 5.23E-27 T 14-10-2018 Amir_2652 3cb935a8bc312e5f7ab0df59daabecba 230 Gene3D G3DSA:3.30.70.1210 94 218 2.3E-31 T 14-10-2018 Amir_2652 3cb935a8bc312e5f7ab0df59daabecba 230 Gene3D G3DSA:3.30.70.1200 1 90 1.9E-24 T 14-10-2018 Amir_3600 0cd3b72f44d74e2d5cc6164e33a4cfe5 402 Gene3D G3DSA:1.10.630.10 13 402 3.3E-118 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3600 0cd3b72f44d74e2d5cc6164e33a4cfe5 402 SUPERFAMILY SSF48264 19 401 1.18E-84 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3600 0cd3b72f44d74e2d5cc6164e33a4cfe5 402 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 346 355 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_3600 0cd3b72f44d74e2d5cc6164e33a4cfe5 402 Pfam PF00067 Cytochrome P450 189 372 1.7E-15 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_3600 0cd3b72f44d74e2d5cc6164e33a4cfe5 402 PRINTS PR00359 B-class P450 signature 323 338 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3600 0cd3b72f44d74e2d5cc6164e33a4cfe5 402 PRINTS PR00359 B-class P450 signature 344 353 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3600 0cd3b72f44d74e2d5cc6164e33a4cfe5 402 PRINTS PR00359 B-class P450 signature 353 364 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3600 0cd3b72f44d74e2d5cc6164e33a4cfe5 402 PRINTS PR00359 B-class P450 signature 160 175 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3600 0cd3b72f44d74e2d5cc6164e33a4cfe5 402 PRINTS PR00359 B-class P450 signature 197 219 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3600 0cd3b72f44d74e2d5cc6164e33a4cfe5 402 PRINTS PR00359 B-class P450 signature 295 322 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3600 0cd3b72f44d74e2d5cc6164e33a4cfe5 402 PRINTS PR00359 B-class P450 signature 99 110 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3600 0cd3b72f44d74e2d5cc6164e33a4cfe5 402 PRINTS PR00359 B-class P450 signature 278 289 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_3600 0cd3b72f44d74e2d5cc6164e33a4cfe5 402 PRINTS PR00359 B-class P450 signature 143 159 1.8E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_5946 f1bfd9de4a6b902af5e08afb3b65a0b4 374 Gene3D G3DSA:3.30.420.40 6 343 6.3E-89 T 14-10-2018 Amir_5946 f1bfd9de4a6b902af5e08afb3b65a0b4 374 Gene3D G3DSA:3.30.420.40 128 308 6.3E-89 T 14-10-2018 Amir_5946 f1bfd9de4a6b902af5e08afb3b65a0b4 374 SUPERFAMILY SSF53067 2 309 3.56E-14 T 14-10-2018 Amir_5946 f1bfd9de4a6b902af5e08afb3b65a0b4 374 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 1 347 3.3E-91 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Amir_1867 fa46f80b96b281d713a8674a89dc4a15 405 Pfam PF13529 Peptidase_C39 like family 209 360 6.5E-33 T 14-10-2018 IPR039564 Peptidase C39-like Amir_1867 fa46f80b96b281d713a8674a89dc4a15 405 Gene3D G3DSA:3.90.70.10 230 405 3.5E-7 T 14-10-2018 Amir_2572 5cc763cfc03108a8c64fc3267d72ac79 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 270 9.0E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_2572 5cc763cfc03108a8c64fc3267d72ac79 278 SUPERFAMILY SSF161098 39 268 5.1E-47 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2572 5cc763cfc03108a8c64fc3267d72ac79 278 Gene3D G3DSA:1.10.3720.10 35 276 2.1E-54 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4778 a22a08866c4a2697b2141cfd0b3e98b9 243 Gene3D G3DSA:3.40.50.150 37 215 3.1E-15 T 14-10-2018 Amir_4778 a22a08866c4a2697b2141cfd0b3e98b9 243 SUPERFAMILY SSF53335 36 217 7.11E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_0301 38019a373e6932b01f13c8c3865c85b7 154 SMART SM00894 118 154 7.2E-20 T 14-10-2018 IPR008613 Excalibur calcium-binding domain Amir_0301 38019a373e6932b01f13c8c3865c85b7 154 Pfam PF05901 Excalibur calcium-binding domain 119 154 4.2E-15 T 14-10-2018 IPR008613 Excalibur calcium-binding domain Amir_6531 2ca6446f818dc9082f62ac68ab6b9a6d 481 Pfam PF00171 Aldehyde dehydrogenase family 20 474 4.4E-138 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_6531 2ca6446f818dc9082f62ac68ab6b9a6d 481 SUPERFAMILY SSF53720 6 476 1.57E-135 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_6531 2ca6446f818dc9082f62ac68ab6b9a6d 481 Gene3D G3DSA:3.40.309.10 255 444 1.4E-142 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_6531 2ca6446f818dc9082f62ac68ab6b9a6d 481 Gene3D G3DSA:3.40.605.10 32 464 1.4E-142 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_0356 ee75f963a5f47051fe46519b1d216a13 407 PRINTS PR01988 Putative bacilysin exporter bacE signature 143 164 1.2E-5 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amir_0356 ee75f963a5f47051fe46519b1d216a13 407 PRINTS PR01988 Putative bacilysin exporter bacE signature 18 40 1.2E-5 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amir_0356 ee75f963a5f47051fe46519b1d216a13 407 PRINTS PR01988 Putative bacilysin exporter bacE signature 297 320 1.2E-5 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amir_0356 ee75f963a5f47051fe46519b1d216a13 407 PRINTS PR01988 Putative bacilysin exporter bacE signature 170 187 1.2E-5 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amir_0356 ee75f963a5f47051fe46519b1d216a13 407 Gene3D G3DSA:1.20.1250.20 11 391 1.0E-30 T 14-10-2018 Amir_0356 ee75f963a5f47051fe46519b1d216a13 407 SUPERFAMILY SSF103473 13 397 7.19E-31 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_0356 ee75f963a5f47051fe46519b1d216a13 407 Pfam PF07690 Major Facilitator Superfamily 19 349 2.6E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_1230 41a9b067c10161ed25dffa04c1930773 73 Gene3D G3DSA:3.30.920.30 7 72 2.8E-24 T 14-10-2018 IPR038570 HicA superfamily Amir_1230 41a9b067c10161ed25dffa04c1930773 73 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 11 64 2.0E-19 T 14-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 Amir_1230 41a9b067c10161ed25dffa04c1930773 73 SUPERFAMILY SSF54786 8 71 7.85E-18 T 14-10-2018 Amir_6463 a680d7f7c3bc6b2107650879067d4394 138 Gene3D G3DSA:1.20.1300.10 16 130 1.8E-24 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_6463 a680d7f7c3bc6b2107650879067d4394 138 SUPERFAMILY SSF81343 9 132 4.8E-33 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_6463 a680d7f7c3bc6b2107650879067d4394 138 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 120 9.5E-16 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amir_0674 daad6b3f8a1cf06aa36e43068210b886 434 Pfam PF13406 Transglycosylase SLT domain 190 238 7.6E-9 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 Amir_0674 daad6b3f8a1cf06aa36e43068210b886 434 SUPERFAMILY SSF53955 108 274 3.09E-38 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Amir_3506 729853ce7718f046aa451d0d0a7a937d 245 Pfam PF00149 Calcineurin-like phosphoesterase 4 189 2.1E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amir_3506 729853ce7718f046aa451d0d0a7a937d 245 SUPERFAMILY SSF56300 4 243 1.34E-47 T 14-10-2018 Amir_3506 729853ce7718f046aa451d0d0a7a937d 245 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 2 244 33.43 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 Amir_3506 729853ce7718f046aa451d0d0a7a937d 245 Gene3D G3DSA:3.60.21.10 1 245 8.9E-68 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Amir_5921 cfb16540ae2faa464c196dd3a808811c 288 Gene3D G3DSA:2.10.109.10 171 242 6.9E-12 T 14-10-2018 Amir_5921 cfb16540ae2faa464c196dd3a808811c 288 Gene3D G3DSA:2.10.109.10 40 162 2.3E-11 T 14-10-2018 Amir_5921 cfb16540ae2faa464c196dd3a808811c 288 ProSitePatterns PS00761 Signal peptidases I signature 3. 189 202 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Amir_5921 cfb16540ae2faa464c196dd3a808811c 288 Pfam PF00717 Peptidase S24-like 51 97 1.7E-5 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Amir_5921 cfb16540ae2faa464c196dd3a808811c 288 Pfam PF10502 Signal peptidase, peptidase S26 131 227 1.4E-5 T 14-10-2018 IPR019533 Peptidase S26 Amir_5921 cfb16540ae2faa464c196dd3a808811c 288 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 132 144 1.7E-19 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amir_5921 cfb16540ae2faa464c196dd3a808811c 288 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 184 203 1.7E-19 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amir_5921 cfb16540ae2faa464c196dd3a808811c 288 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 44 60 1.7E-19 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amir_5921 cfb16540ae2faa464c196dd3a808811c 288 SUPERFAMILY SSF51306 43 236 2.41E-41 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Amir_5921 cfb16540ae2faa464c196dd3a808811c 288 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 31 229 1.2E-35 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amir_3110 8f0a4715d66662034faa06d3ac3c6347 533 SUPERFAMILY SSF53383 127 520 2.13E-79 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_3110 8f0a4715d66662034faa06d3ac3c6347 533 Gene3D G3DSA:3.40.640.10 184 418 2.0E-95 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_3110 8f0a4715d66662034faa06d3ac3c6347 533 Pfam PF00155 Aminotransferase class I and II 168 514 2.1E-39 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amir_3110 8f0a4715d66662034faa06d3ac3c6347 533 Gene3D G3DSA:3.90.1150.10 169 510 2.0E-95 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_5481 6cf3a13545f0fa99d90aab60264c2b61 529 SUPERFAMILY SSF51556 53 463 7.56E-75 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_5481 6cf3a13545f0fa99d90aab60264c2b61 529 SUPERFAMILY SSF51338 2 517 1.17E-18 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amir_5481 6cf3a13545f0fa99d90aab60264c2b61 529 Pfam PF07969 Amidohydrolase family 41 508 3.5E-50 T 14-10-2018 IPR013108 Amidohydrolase 3 Amir_5481 6cf3a13545f0fa99d90aab60264c2b61 529 Gene3D G3DSA:3.20.20.140 293 457 6.6E-21 T 14-10-2018 Amir_5481 6cf3a13545f0fa99d90aab60264c2b61 529 Gene3D G3DSA:3.20.20.140 52 292 1.2E-80 T 14-10-2018 Amir_1256 9d53c2b38d5a4dde455366e874b74c30 288 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 207 224 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Amir_1256 9d53c2b38d5a4dde455366e874b74c30 288 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 34 262 38.596 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Amir_1256 9d53c2b38d5a4dde455366e874b74c30 288 Gene3D G3DSA:3.40.1180.10 3 256 7.9E-96 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Amir_1256 9d53c2b38d5a4dde455366e874b74c30 288 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 34 261 3.3E-75 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Amir_1256 9d53c2b38d5a4dde455366e874b74c30 288 SUPERFAMILY SSF64005 34 257 2.49E-83 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Amir_1256 9d53c2b38d5a4dde455366e874b74c30 288 Pfam PF01255 Putative undecaprenyl diphosphate synthase 41 261 3.6E-74 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Amir_3607 31e232fc109c72e700c6c7a3eef362ca 159 Pfam PF13581 Histidine kinase-like ATPase domain 41 143 1.7E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_3607 31e232fc109c72e700c6c7a3eef362ca 159 Gene3D G3DSA:3.30.565.10 25 159 6.1E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1525 920381e549ab6d5020457e3f412ad8dd 234 Pfam PF01145 SPFH domain / Band 7 family 4 172 1.4E-21 T 14-10-2018 IPR001107 Band 7 domain Amir_1525 920381e549ab6d5020457e3f412ad8dd 234 PRINTS PR00721 Stomatin signature 7 29 5.8E-18 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Amir_1525 920381e549ab6d5020457e3f412ad8dd 234 PRINTS PR00721 Stomatin signature 132 150 5.8E-18 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Amir_1525 920381e549ab6d5020457e3f412ad8dd 234 PRINTS PR00721 Stomatin signature 53 74 5.8E-18 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Amir_1525 920381e549ab6d5020457e3f412ad8dd 234 PRINTS PR00721 Stomatin signature 151 172 5.8E-18 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Amir_1525 920381e549ab6d5020457e3f412ad8dd 234 PRINTS PR00721 Stomatin signature 176 199 5.8E-18 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Amir_1525 920381e549ab6d5020457e3f412ad8dd 234 SUPERFAMILY SSF117892 34 161 6.67E-18 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily Amir_1525 920381e549ab6d5020457e3f412ad8dd 234 Gene3D G3DSA:3.30.479.30 30 158 2.6E-18 T 14-10-2018 Amir_0527 e817d6d7103079b2ece9f1fa08115eef 312 SUPERFAMILY SSF53613 2 305 7.17E-65 T 14-10-2018 IPR029056 Ribokinase-like Amir_0527 e817d6d7103079b2ece9f1fa08115eef 312 Gene3D G3DSA:3.40.1190.20 1 309 3.6E-74 T 14-10-2018 IPR029056 Ribokinase-like Amir_0527 e817d6d7103079b2ece9f1fa08115eef 312 Pfam PF00294 pfkB family carbohydrate kinase 2 303 2.9E-43 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Amir_0527 e817d6d7103079b2ece9f1fa08115eef 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Amir_2404 74427857cf68928c596217960f1d5ab6 424 SUPERFAMILY SSF53850 17 423 4.2E-67 T 14-10-2018 Amir_2404 74427857cf68928c596217960f1d5ab6 424 Gene3D G3DSA:3.40.190.10 48 381 1.1E-108 T 14-10-2018 Amir_2404 74427857cf68928c596217960f1d5ab6 424 Pfam PF01547 Bacterial extracellular solute-binding protein 47 341 5.4E-30 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_2404 74427857cf68928c596217960f1d5ab6 424 Gene3D G3DSA:3.40.190.10 145 414 1.1E-108 T 14-10-2018 Amir_3609 3672b725a257f3185ba237c5150319ae 228 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 1.2E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3609 3672b725a257f3185ba237c5150319ae 228 SUPERFAMILY SSF46689 4 78 8.48E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3609 3672b725a257f3185ba237c5150319ae 228 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 3.9E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3609 3672b725a257f3185ba237c5150319ae 228 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 3.9E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_3609 3672b725a257f3185ba237c5150319ae 228 SUPERFAMILY SSF48498 84 218 1.09E-24 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_3609 3672b725a257f3185ba237c5150319ae 228 Gene3D G3DSA:1.10.357.10 1 226 8.9E-65 T 14-10-2018 Amir_3233 54cd125ccdd6a6d310f96c8048d6c756 661 Gene3D G3DSA:1.20.1740.10 58 507 2.7E-8 T 14-10-2018 Amir_0474 b4169201ca70144742dec7d096f89b10 234 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 6 209 4.7E-15 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type Amir_0474 b4169201ca70144742dec7d096f89b10 234 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 8 118 5.3E-15 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 Amir_0474 b4169201ca70144742dec7d096f89b10 234 SUPERFAMILY SSF109854 21 122 1.1E-6 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_0074 d8dc9c917b6fd39b6fff9a21a18e5209 115 SMART SM00450 6 102 1.8E-20 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_0074 d8dc9c917b6fd39b6fff9a21a18e5209 115 Gene3D G3DSA:3.40.250.10 4 105 1.1E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_0074 d8dc9c917b6fd39b6fff9a21a18e5209 115 Pfam PF00581 Rhodanese-like domain 21 97 6.4E-13 T 14-10-2018 IPR001763 Rhodanese-like domain Amir_0074 d8dc9c917b6fd39b6fff9a21a18e5209 115 SUPERFAMILY SSF52821 4 105 4.85E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Amir_6356 5fd11146263c8873b9f75fdfe2ebf44d 406 Gene3D G3DSA:1.10.260.40 3 62 1.9E-10 T 14-10-2018 Amir_6356 5fd11146263c8873b9f75fdfe2ebf44d 406 Pfam PF13560 Helix-turn-helix domain 8 68 1.0E-12 T 14-10-2018 Amir_6356 5fd11146263c8873b9f75fdfe2ebf44d 406 SMART SM00530 11 66 3.2E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_6356 5fd11146263c8873b9f75fdfe2ebf44d 406 SUPERFAMILY SSF47413 6 57 2.36E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_6356 5fd11146263c8873b9f75fdfe2ebf44d 406 Gene3D G3DSA:1.25.40.10 154 384 1.2E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6496 70814c3bd2aa832743ea23d59453e9c5 156 SUPERFAMILY SSF160424 13 151 3.79E-18 T 14-10-2018 IPR036170 Probable antitoxin YezG superfamily Amir_3867 84fee1b4965f622f0963190d49af65cf 219 Gene3D G3DSA:1.10.357.10 27 204 1.3E-14 T 14-10-2018 Amir_3867 84fee1b4965f622f0963190d49af65cf 219 SUPERFAMILY SSF46689 30 84 8.21E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5904 2db3898e1421b8155d68955318142e62 317 Pfam PF00248 Aldo/keto reductase family 8 298 1.4E-60 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_5904 2db3898e1421b8155d68955318142e62 317 Gene3D G3DSA:3.20.20.100 2 315 3.6E-76 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_5904 2db3898e1421b8155d68955318142e62 317 SUPERFAMILY SSF51430 3 299 5.37E-73 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_2908 4404b0b3d0df0de543b33bc395e08ed2 501 SUPERFAMILY SSF53850 21 459 3.98E-44 T 14-10-2018 Amir_2908 4404b0b3d0df0de543b33bc395e08ed2 501 Gene3D G3DSA:3.10.105.10 296 454 2.0E-17 T 14-10-2018 Amir_2908 4404b0b3d0df0de543b33bc395e08ed2 501 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 50 219 2.2E-15 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Amir_2908 4404b0b3d0df0de543b33bc395e08ed2 501 Gene3D G3DSA:3.40.190.10 178 234 7.4E-24 T 14-10-2018 Amir_2908 4404b0b3d0df0de543b33bc395e08ed2 501 Gene3D G3DSA:3.90.76.10 38 177 7.4E-24 T 14-10-2018 Amir_0553 6dee9e29c43ae630e1243d1ee5758a4a 365 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 253 355 4.6E-16 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like Amir_0553 6dee9e29c43ae630e1243d1ee5758a4a 365 Gene3D G3DSA:3.10.490.10 245 353 9.0E-18 T 14-10-2018 Amir_0553 6dee9e29c43ae630e1243d1ee5758a4a 365 SUPERFAMILY SSF110857 252 362 2.62E-19 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily Amir_6036 e974ec56156387770cfa234cf45692f7 215 SUPERFAMILY SSF55021 3 70 7.91E-8 T 14-10-2018 Amir_3464 dd13eb585b07dec1df075715e3795fc6 293 Gene3D G3DSA:1.10.3720.10 78 286 8.6E-22 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3464 dd13eb585b07dec1df075715e3795fc6 293 SUPERFAMILY SSF161098 84 272 1.31E-25 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3464 dd13eb585b07dec1df075715e3795fc6 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 289 1.3E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_3464 dd13eb585b07dec1df075715e3795fc6 293 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 47 1.3E-5 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Amir_3093 e33935efabb784b9dd023ea07a5ead30 399 Gene3D G3DSA:1.20.1250.20 9 385 1.0E-33 T 14-10-2018 Amir_3093 e33935efabb784b9dd023ea07a5ead30 399 Pfam PF07690 Major Facilitator Superfamily 32 312 6.8E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_3093 e33935efabb784b9dd023ea07a5ead30 399 SUPERFAMILY SSF103473 6 391 2.75E-42 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_6776 f7440de59c2b32e1a0e0f5cd5c189e48 418 Pfam PF04286 Protein of unknown function (DUF445) 54 416 7.8E-105 T 14-10-2018 IPR007383 Protein of unknown function DUF445 Amir_6521 a8a4758ee2e2439613646cf2ec59da81 553 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 41 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_6521 a8a4758ee2e2439613646cf2ec59da81 553 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 135 147 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_6521 a8a4758ee2e2439613646cf2ec59da81 553 Gene3D G3DSA:1.10.510.10 91 274 6.9E-47 T 14-10-2018 Amir_6521 a8a4758ee2e2439613646cf2ec59da81 553 Gene3D G3DSA:3.30.200.20 2 90 5.2E-29 T 14-10-2018 Amir_6521 a8a4758ee2e2439613646cf2ec59da81 553 Pfam PF00069 Protein kinase domain 12 264 1.9E-50 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_6521 a8a4758ee2e2439613646cf2ec59da81 553 PIRSF PIRSF000654 18 273 2.9E-20 T 14-10-2018 Amir_6521 a8a4758ee2e2439613646cf2ec59da81 553 PIRSF PIRSF000654 503 550 530.0 T 14-10-2018 Amir_6521 a8a4758ee2e2439613646cf2ec59da81 553 SUPERFAMILY SSF56112 8 348 4.59E-74 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_6521 a8a4758ee2e2439613646cf2ec59da81 553 SMART SM00220 12 270 2.5E-66 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_5990 682a0e50508b8452fa5de9f076e947c9 215 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 21 163 1.7E-46 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related Amir_5990 682a0e50508b8452fa5de9f076e947c9 215 SUPERFAMILY SSF50475 2 186 1.18E-56 T 14-10-2018 Amir_5990 682a0e50508b8452fa5de9f076e947c9 215 Gene3D G3DSA:2.30.110.10 2 215 9.6E-73 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_3503 011c27d1cae33cea0c1c415b663a445c 192 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 9 102 2.7E-10 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amir_3503 011c27d1cae33cea0c1c415b663a445c 192 Gene3D G3DSA:2.30.110.10 2 132 2.1E-19 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_3503 011c27d1cae33cea0c1c415b663a445c 192 SUPERFAMILY SSF50475 8 132 4.91E-11 T 14-10-2018 Amir_1519 1c427e387a2f389996095cc7063fe8aa 272 Pfam PF11361 Protein of unknown function (DUF3159) 30 214 1.8E-60 T 14-10-2018 IPR016566 Uncharacterised conserved protein UCP010219 Amir_0883 cbf43049f24acbe070ac366e812cd739 156 Gene3D G3DSA:1.10.1220.180 78 154 1.5E-9 T 14-10-2018 Amir_4214 2b36ca8999143e9241bbd84f0e43f8ae 304 SUPERFAMILY SSF53474 62 286 6.81E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4214 2b36ca8999143e9241bbd84f0e43f8ae 304 Pfam PF07859 alpha/beta hydrolase fold 76 273 3.5E-31 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 Amir_4214 2b36ca8999143e9241bbd84f0e43f8ae 304 Gene3D G3DSA:3.40.50.1820 7 301 1.5E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2732 15b619604e6dfc030354936542b41ff8 338 Gene3D G3DSA:3.40.50.1980 37 160 1.8E-24 T 14-10-2018 Amir_2732 15b619604e6dfc030354936542b41ff8 338 SUPERFAMILY SSF53807 57 335 9.81E-44 T 14-10-2018 Amir_2732 15b619604e6dfc030354936542b41ff8 338 Gene3D G3DSA:3.40.50.1980 166 338 1.5E-52 T 14-10-2018 Amir_2732 15b619604e6dfc030354936542b41ff8 338 Pfam PF01497 Periplasmic binding protein 60 314 1.1E-21 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Amir_5273 6ee2f6806b505cdb6fc90ecc11ac90c5 212 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 39 157 1.3E-5 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Amir_5273 6ee2f6806b505cdb6fc90ecc11ac90c5 212 SUPERFAMILY SSF52540 15 160 1.49E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5273 6ee2f6806b505cdb6fc90ecc11ac90c5 212 Gene3D G3DSA:3.40.50.300 15 196 1.1E-20 T 14-10-2018 Amir_5273 6ee2f6806b505cdb6fc90ecc11ac90c5 212 PRINTS PR00988 Uridine kinase signature 14 31 3.2E-8 T 14-10-2018 Amir_5273 6ee2f6806b505cdb6fc90ecc11ac90c5 212 PRINTS PR00988 Uridine kinase signature 144 154 3.2E-8 T 14-10-2018 Amir_5273 6ee2f6806b505cdb6fc90ecc11ac90c5 212 PRINTS PR00988 Uridine kinase signature 84 99 3.2E-8 T 14-10-2018 Amir_1360 c6421bc9f0fc70aa488b203c043bebea 328 PRINTS PR00069 Aldo-keto reductase signature 247 271 6.3E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_1360 c6421bc9f0fc70aa488b203c043bebea 328 PRINTS PR00069 Aldo-keto reductase signature 40 64 6.3E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_1360 c6421bc9f0fc70aa488b203c043bebea 328 PRINTS PR00069 Aldo-keto reductase signature 106 124 6.3E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_1360 c6421bc9f0fc70aa488b203c043bebea 328 SUPERFAMILY SSF51430 1 316 3.27E-95 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_1360 c6421bc9f0fc70aa488b203c043bebea 328 Gene3D G3DSA:3.20.20.100 1 323 1.6E-113 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_1360 c6421bc9f0fc70aa488b203c043bebea 328 Pfam PF00248 Aldo/keto reductase family 15 314 5.3E-75 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_2309 638f6fb2374954c00e5f17c265e321af 338 SUPERFAMILY SSF48613 137 308 2.49E-12 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Amir_2309 638f6fb2374954c00e5f17c265e321af 338 SMART SM01236 173 278 4.8E-38 T 14-10-2018 Amir_2309 638f6fb2374954c00e5f17c265e321af 338 Pfam PF14518 Iron-containing redox enzyme 142 313 2.5E-47 T 14-10-2018 Amir_2309 638f6fb2374954c00e5f17c265e321af 338 Gene3D G3DSA:1.20.910.10 129 327 7.4E-28 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Amir_1743 2938bba2a18cad28fb0c2439a90b530c 406 SUPERFAMILY SSF53098 108 371 1.52E-26 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_1743 2938bba2a18cad28fb0c2439a90b530c 406 Pfam PF13006 Insertion element 4 transposase N-terminal 19 116 7.1E-34 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal Amir_1743 2938bba2a18cad28fb0c2439a90b530c 406 Pfam PF01609 Transposase DDE domain 136 363 1.9E-20 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amir_1728 964475550529174c3e6bfc7d162dc4fa 252 Pfam PF05331 Protein of unknown function (DUF742) 148 252 3.5E-30 T 14-10-2018 IPR007995 Protein of unknown function DUF742 Amir_2784 f32401c9efe7da88ec81547956d9d2a9 284 SUPERFAMILY SSF47413 36 87 1.55E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_2784 f32401c9efe7da88ec81547956d9d2a9 284 Gene3D G3DSA:3.30.450.180 113 271 1.3E-12 T 14-10-2018 Amir_2784 f32401c9efe7da88ec81547956d9d2a9 284 Pfam PF13560 Helix-turn-helix domain 12 91 3.6E-19 T 14-10-2018 Amir_2784 f32401c9efe7da88ec81547956d9d2a9 284 Gene3D G3DSA:1.10.260.40 36 90 4.4E-9 T 14-10-2018 Amir_2784 f32401c9efe7da88ec81547956d9d2a9 284 SMART SM00530 16 88 2.6E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_1560 a415285bc66ac7199e7794c8eaaf8b5b 259 TIGRFAM TIGR04222 near_uncomplex: TIGR04222 domain 6 175 3.7E-20 T 14-10-2018 IPR026467 Ser/Gly rich, Cys interspersed, C-terminal domain Amir_6210 12bef45c7046725b848f42b1e7fe05e4 493 Pfam PF13777 Domain of unknown function (DUF4173) 263 452 3.0E-62 T 14-10-2018 IPR025231 Domain of unknown function DUF4173 Amir_2193 8097738158e765d8f356fbb56722ccce 648 SUPERFAMILY SSF53300 462 633 2.37E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_2193 8097738158e765d8f356fbb56722ccce 648 Gene3D G3DSA:3.40.50.410 456 638 1.0E-14 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amir_2193 8097738158e765d8f356fbb56722ccce 648 SMART SM00327 460 642 5.4E-10 T 14-10-2018 IPR002035 von Willebrand factor, type A Amir_3000 cebbe5ee3872e6bee23c391c0e7a7020 272 Gene3D G3DSA:3.40.50.720 2 270 6.8E-38 T 14-10-2018 Amir_3000 cebbe5ee3872e6bee23c391c0e7a7020 272 SUPERFAMILY SSF51735 7 266 1.1E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3000 cebbe5ee3872e6bee23c391c0e7a7020 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3000 cebbe5ee3872e6bee23c391c0e7a7020 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 2.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3000 cebbe5ee3872e6bee23c391c0e7a7020 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3000 cebbe5ee3872e6bee23c391c0e7a7020 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 2.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3000 cebbe5ee3872e6bee23c391c0e7a7020 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 247 2.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3000 cebbe5ee3872e6bee23c391c0e7a7020 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 133 4.4E-8 T 14-10-2018 Amir_3000 cebbe5ee3872e6bee23c391c0e7a7020 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 167 263 9.3E-22 T 14-10-2018 Amir_1531 5fae20be432cbc62ac7c5d1054fdc022 254 Pfam PF14011 EspG family 7 249 1.2E-65 T 14-10-2018 IPR025734 EspG family Amir_6772 1e183508db72a726a33a9ec6c2a348ad 107 Pfam PF10724 Protein of unknown function (DUF2516) 14 104 1.1E-29 T 14-10-2018 IPR019662 Protein of unknown function DUF2516 Amir_5680 dedb068a1b98f66ed76a73cfc2e7ebcc 282 Gene3D G3DSA:1.10.260.40 4 78 7.6E-11 T 14-10-2018 Amir_5680 dedb068a1b98f66ed76a73cfc2e7ebcc 282 SUPERFAMILY SSF47413 10 74 8.73E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_5680 dedb068a1b98f66ed76a73cfc2e7ebcc 282 Pfam PF13560 Helix-turn-helix domain 14 75 1.0E-18 T 14-10-2018 Amir_5680 dedb068a1b98f66ed76a73cfc2e7ebcc 282 SMART SM00530 17 72 3.1E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_4578 7979b78fa23327fd77059545fe712bdd 259 Pfam PF13359 DDE superfamily endonuclease 110 254 1.9E-17 T 14-10-2018 IPR027806 Harbinger transposase-derived nuclease domain Amir_4578 7979b78fa23327fd77059545fe712bdd 259 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 47 95 6.7E-15 T 14-10-2018 IPR027805 Transposase, Helix-turn-helix domain Amir_0708 3a531020c5584bf4b4ebdd19c0b3a865 139 Pfam PF14155 Domain of unknown function (DUF4307) 20 128 1.7E-31 T 14-10-2018 IPR025443 Protein of unknown function DUF4307 Amir_2436 fa9c640e4e15fbf2d7959aeeff4789ba 495 Pfam PF00999 Sodium/hydrogen exchanger family 8 424 6.8E-44 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Amir_4787 17e1b81e899c01f64f7abde5d4f66ec3 516 Pfam PF01425 Amidase 99 506 5.2E-105 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Amir_4787 17e1b81e899c01f64f7abde5d4f66ec3 516 Gene3D G3DSA:3.90.1300.10 81 516 1.8E-134 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Amir_4787 17e1b81e899c01f64f7abde5d4f66ec3 516 ProSitePatterns PS00571 Amidases signature. 221 252 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Amir_4787 17e1b81e899c01f64f7abde5d4f66ec3 516 SUPERFAMILY SSF75304 71 514 2.88E-123 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Amir_4514 2d1c03a77e56896ca1933a736c811c9d 222 SMART SM00862 145 217 1.2E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4514 2d1c03a77e56896ca1933a736c811c9d 222 SUPERFAMILY SSF52172 2 172 3.95E-35 T 14-10-2018 IPR011006 CheY-like superfamily Amir_4514 2d1c03a77e56896ca1933a736c811c9d 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 217 4.8E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_4514 2d1c03a77e56896ca1933a736c811c9d 222 SMART SM00448 1 112 1.4E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4514 2d1c03a77e56896ca1933a736c811c9d 222 Pfam PF00072 Response regulator receiver domain 3 112 6.5E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_4514 2d1c03a77e56896ca1933a736c811c9d 222 Gene3D G3DSA:3.40.50.2300 1 118 2.7E-32 T 14-10-2018 Amir_4514 2d1c03a77e56896ca1933a736c811c9d 222 Gene3D G3DSA:1.10.10.10 119 219 1.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4206 d4ec9b086a9035bcf2879f99a73ae2e0 451 Gene3D G3DSA:3.50.50.60 12 451 7.2E-125 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4206 d4ec9b086a9035bcf2879f99a73ae2e0 451 SUPERFAMILY SSF51905 19 429 5.28E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4206 d4ec9b086a9035bcf2879f99a73ae2e0 451 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 22 366 2.4E-91 T 14-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase Amir_2496 892fa4f9133f9d8f2302df8b4285a28c 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 1.8E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_2496 892fa4f9133f9d8f2302df8b4285a28c 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 1.8E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_2496 892fa4f9133f9d8f2302df8b4285a28c 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 1.8E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_2496 892fa4f9133f9d8f2302df8b4285a28c 277 Gene3D G3DSA:3.40.50.1820 3 256 4.3E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2496 892fa4f9133f9d8f2302df8b4285a28c 277 SUPERFAMILY SSF53474 5 253 1.59E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2496 892fa4f9133f9d8f2302df8b4285a28c 277 Pfam PF00561 alpha/beta hydrolase fold 26 152 1.7E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_1182 44921a71f8336d3b7466bb98e5725b8a 298 Pfam PF02424 ApbE family 21 274 1.1E-49 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Amir_1182 44921a71f8336d3b7466bb98e5725b8a 298 Gene3D G3DSA:3.10.520.20 4 295 3.4E-63 T 14-10-2018 Amir_1182 44921a71f8336d3b7466bb98e5725b8a 298 SUPERFAMILY SSF143631 3 283 5.75E-56 T 14-10-2018 IPR003374 ApbE-like superfamily Amir_2217 b8f8933444c80f8674be7ecfc537809d 148 Gene3D G3DSA:3.40.630.30 19 136 2.5E-7 T 14-10-2018 Amir_2217 b8f8933444c80f8674be7ecfc537809d 148 SUPERFAMILY SSF55729 20 134 8.74E-7 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_2338 57541d6fab138b7ba078884668cea6f5 101 Pfam PF06289 Flagellar protein (FlbD) 2 58 3.1E-21 T 14-10-2018 IPR009384 Swarming motility protein SwrD-like Amir_5515 7578eaee0eb91d6e87858617d2b93c16 327 Pfam PF12730 ABC-2 family transporter protein 72 228 6.2E-9 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Amir_1278 f92fb0681ed7b54bf0ce58002a78bc93 185 SUPERFAMILY SSF55811 10 176 3.38E-30 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_1278 f92fb0681ed7b54bf0ce58002a78bc93 185 Gene3D G3DSA:3.90.79.10 6 181 1.8E-40 T 14-10-2018 Amir_1278 f92fb0681ed7b54bf0ce58002a78bc93 185 PRINTS PR00502 NUDIX hydrolase family signature 91 106 1.2E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_1278 f92fb0681ed7b54bf0ce58002a78bc93 185 PRINTS PR00502 NUDIX hydrolase family signature 77 91 1.2E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amir_1278 f92fb0681ed7b54bf0ce58002a78bc93 185 Pfam PF00293 NUDIX domain 48 156 5.8E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_1278 f92fb0681ed7b54bf0ce58002a78bc93 185 ProSitePatterns PS00893 Nudix box signature. 82 103 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_2264 ccddcb37bcbc591dde2baba049381f99 311 Pfam PF03576 Peptidase family S58 3 293 1.6E-43 T 14-10-2018 IPR005321 Peptidase S58, DmpA Amir_2264 ccddcb37bcbc591dde2baba049381f99 311 Gene3D G3DSA:3.60.70.12 1 304 1.4E-82 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amir_2264 ccddcb37bcbc591dde2baba049381f99 311 SUPERFAMILY SSF56266 2 290 2.88E-42 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amir_1102 51d4746b22e2db34fb08d9a06d91147d 403 SUPERFAMILY SSF47413 5 67 3.07E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1102 51d4746b22e2db34fb08d9a06d91147d 403 Gene3D G3DSA:1.10.260.40 1 68 1.2E-16 T 14-10-2018 Amir_1102 51d4746b22e2db34fb08d9a06d91147d 403 Pfam PF13560 Helix-turn-helix domain 5 64 4.4E-13 T 14-10-2018 Amir_1102 51d4746b22e2db34fb08d9a06d91147d 403 SMART SM00530 8 64 2.6E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_1102 51d4746b22e2db34fb08d9a06d91147d 403 Gene3D G3DSA:1.25.40.10 136 399 1.4E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6119 fb087b4dcea5cff72777456fee07fe7c 245 Gene3D G3DSA:3.20.20.80 37 202 1.7E-10 T 14-10-2018 Amir_4258 9639f6e22813b0429255f597a8c5861a 284 SUPERFAMILY SSF53335 97 276 2.26E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_4258 9639f6e22813b0429255f597a8c5861a 284 Pfam PF01596 O-methyltransferase 98 276 3.1E-42 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 Amir_4258 9639f6e22813b0429255f597a8c5861a 284 Gene3D G3DSA:3.40.50.150 47 276 1.6E-65 T 14-10-2018 Amir_7026 3634f0316f569bbdddd26b505184ee72 696 SUPERFAMILY SSF63829 308 659 4.25E-8 T 14-10-2018 Amir_7026 3634f0316f569bbdddd26b505184ee72 696 Pfam PF05787 Bacterial protein of unknown function (DUF839) 108 657 3.8E-164 T 14-10-2018 IPR008557 Protein of unknown function DUF839 Amir_4830 340756003c78ddf21ab8866bba772efd 119 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 15 45 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_4830 340756003c78ddf21ab8866bba772efd 119 Gene3D G3DSA:3.30.200.20 7 75 1.4E-19 T 14-10-2018 Amir_4830 340756003c78ddf21ab8866bba772efd 119 SUPERFAMILY SSF56112 4 73 1.42E-13 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_1157 25fa5312f4b640005bdd240c02600c20 274 Pfam PF02634 FdhD/NarQ family 26 272 1.5E-81 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Amir_1157 25fa5312f4b640005bdd240c02600c20 274 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 2 273 34.152 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Amir_1157 25fa5312f4b640005bdd240c02600c20 274 PIRSF PIRSF015626 2 274 2.8E-88 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Amir_1157 25fa5312f4b640005bdd240c02600c20 274 SUPERFAMILY SSF53927 4 272 1.77E-78 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Amir_1157 25fa5312f4b640005bdd240c02600c20 274 Gene3D G3DSA:3.10.20.10 28 120 4.4E-7 T 14-10-2018 Amir_1157 25fa5312f4b640005bdd240c02600c20 274 Gene3D G3DSA:3.40.140.10 125 274 5.5E-53 T 14-10-2018 Amir_1157 25fa5312f4b640005bdd240c02600c20 274 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 22 272 1.1E-52 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Amir_2497 54767dabc32c3a7f423d06b8d20cc955 380 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 216 346 2.0E-13 T 14-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 Amir_2497 54767dabc32c3a7f423d06b8d20cc955 380 Gene3D G3DSA:3.40.50.2000 202 364 1.1E-90 T 14-10-2018 Amir_2497 54767dabc32c3a7f423d06b8d20cc955 380 SUPERFAMILY SSF53756 3 379 3.37E-70 T 14-10-2018 Amir_2497 54767dabc32c3a7f423d06b8d20cc955 380 Gene3D G3DSA:3.40.50.2000 6 375 1.1E-90 T 14-10-2018 Amir_2497 54767dabc32c3a7f423d06b8d20cc955 380 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 10 378 1.6E-49 T 14-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 Amir_2249 30f9eae23242e1c116780cc32875a7b7 327 Pfam PF13280 WYL domain 147 319 2.2E-29 T 14-10-2018 IPR026881 WYL domain Amir_1328 11a7b90053bdedaacb9354b7a9ca64de 393 Pfam PF13556 PucR C-terminal helix-turn-helix domain 325 382 9.5E-21 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Amir_1328 11a7b90053bdedaacb9354b7a9ca64de 393 Gene3D G3DSA:1.10.10.2840 261 388 4.9E-41 T 14-10-2018 Amir_4426 4f4faf3ffe743d84ec728fe6da7041dc 364 SMART SM00331 11 236 1.2E-30 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_4426 4f4faf3ffe743d84ec728fe6da7041dc 364 SMART SM00332 2 234 9.8E-16 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_4426 4f4faf3ffe743d84ec728fe6da7041dc 364 SUPERFAMILY SSF81606 4 235 3.92E-60 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_4426 4f4faf3ffe743d84ec728fe6da7041dc 364 Gene3D G3DSA:3.60.40.10 2 237 1.7E-61 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_4426 4f4faf3ffe743d84ec728fe6da7041dc 364 Pfam PF13672 Protein phosphatase 2C 18 201 6.6E-14 T 14-10-2018 Amir_4456 64b6a42fdd357797c557f1b55030c7ec 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 247 6.7E-40 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Amir_4279 02ae155bc67d2ac026eb902ccf46e3bb 328 Pfam PF01636 Phosphotransferase enzyme family 37 275 1.1E-15 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_4279 02ae155bc67d2ac026eb902ccf46e3bb 328 Gene3D G3DSA:3.30.200.20 30 106 3.3E-8 T 14-10-2018 Amir_4279 02ae155bc67d2ac026eb902ccf46e3bb 328 Gene3D G3DSA:3.90.1200.10 132 314 2.7E-16 T 14-10-2018 Amir_4279 02ae155bc67d2ac026eb902ccf46e3bb 328 SUPERFAMILY SSF56112 37 280 1.79E-25 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_3987 6ccef7a2f8633c4379734082c8612eb1 253 SUPERFAMILY SSF49899 33 251 3.39E-70 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_3987 6ccef7a2f8633c4379734082c8612eb1 253 Gene3D G3DSA:2.60.120.180 31 253 8.9E-87 T 14-10-2018 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_3987 6ccef7a2f8633c4379734082c8612eb1 253 Pfam PF01670 Glycosyl hydrolase family 12 46 250 2.1E-65 T 14-10-2018 IPR002594 Glycoside hydrolase family 12 GO:0000272|GO:0008810 Amir_0734 9a9d079a9bfc39a8dce7ceedae6a2a1e 164 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 134 140 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Amir_0734 9a9d079a9bfc39a8dce7ceedae6a2a1e 164 Gene3D G3DSA:1.10.10.10 77 164 4.9E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0734 9a9d079a9bfc39a8dce7ceedae6a2a1e 164 SUPERFAMILY SSF46767 85 164 3.4E-25 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Amir_0734 9a9d079a9bfc39a8dce7ceedae6a2a1e 164 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 85 164 1.6E-25 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Amir_0734 9a9d079a9bfc39a8dce7ceedae6a2a1e 164 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 85 163 8.0E-27 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Amir_3563 b1c8b929bd27f76526f65a27714f77d1 307 SUPERFAMILY SSF56112 4 257 5.69E-23 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_3563 b1c8b929bd27f76526f65a27714f77d1 307 Gene3D G3DSA:1.10.510.10 168 256 3.3E-10 T 14-10-2018 Amir_3563 b1c8b929bd27f76526f65a27714f77d1 307 Pfam PF01636 Phosphotransferase enzyme family 31 246 1.8E-14 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_3580 7a0a38f01ef22fe187d1e13705f23740 773 Pfam PF04738 Lantibiotic dehydratase, C terminus 85 720 1.4E-84 T 14-10-2018 IPR006827 Lantibiotic dehydratase, N-terminal Amir_6907 8b0248cece7a852b9ee5f1474ef14c88 380 Pfam PF00296 Luciferase-like monooxygenase 5 335 2.9E-84 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_6907 8b0248cece7a852b9ee5f1474ef14c88 380 SUPERFAMILY SSF51679 24 364 8.1E-90 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_6907 8b0248cece7a852b9ee5f1474ef14c88 380 Gene3D G3DSA:3.20.20.30 1 365 2.6E-129 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_0132 07c830a14436e3cef703a0176d0fb14a 298 Pfam PF00535 Glycosyl transferase family 2 12 137 3.7E-10 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_0132 07c830a14436e3cef703a0176d0fb14a 298 Gene3D G3DSA:3.90.550.10 3 219 1.8E-14 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0132 07c830a14436e3cef703a0176d0fb14a 298 SUPERFAMILY SSF53448 12 290 1.53E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_6733 d1b864578cb01ffba19da7fb0ed7d7fb 608 Gene3D G3DSA:3.90.420.10 286 496 5.9E-47 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Amir_6733 d1b864578cb01ffba19da7fb0ed7d7fb 608 Gene3D G3DSA:2.60.40.650 500 607 9.9E-23 T 14-10-2018 Amir_6733 d1b864578cb01ffba19da7fb0ed7d7fb 608 SUPERFAMILY SSF81296 499 607 5.32E-20 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_6733 d1b864578cb01ffba19da7fb0ed7d7fb 608 SUPERFAMILY SSF56524 318 500 1.83E-53 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Amir_6733 d1b864578cb01ffba19da7fb0ed7d7fb 608 Pfam PF00174 Oxidoreductase molybdopterin binding domain 335 482 9.9E-36 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 Amir_1984 fa5ad0131b37fd3e3c4496f2dc755b8b 327 SUPERFAMILY SSF53474 4 322 1.17E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1984 fa5ad0131b37fd3e3c4496f2dc755b8b 327 Gene3D G3DSA:3.40.50.1820 1 322 9.9E-82 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1984 fa5ad0131b37fd3e3c4496f2dc755b8b 327 Pfam PF05448 Acetyl xylan esterase (AXE1) 2 318 1.3E-93 T 14-10-2018 IPR008391 Acetyl xylan esterase Amir_2666 df9626daf09b4202558640954ec5f5a0 617 Gene3D G3DSA:3.10.105.10 334 580 1.4E-26 T 14-10-2018 Amir_2666 df9626daf09b4202558640954ec5f5a0 617 SUPERFAMILY SSF53850 30 612 5.25E-56 T 14-10-2018 Amir_2666 df9626daf09b4202558640954ec5f5a0 617 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 491 2.8E-33 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Amir_2666 df9626daf09b4202558640954ec5f5a0 617 Gene3D G3DSA:3.40.190.10 10 292 4.8E-26 T 14-10-2018 Amir_0829 36988fb465d47897a447844272c27b8e 299 SUPERFAMILY SSF47240 40 233 1.85E-6 T 14-10-2018 IPR009078 Ferritin-like superfamily Amir_0829 36988fb465d47897a447844272c27b8e 299 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 8 282 2.3E-106 T 14-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF Amir_0853 75d63e572baf24b08d82c5569cab0a76 111 Gene3D G3DSA:1.10.10.10 2 101 2.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0853 75d63e572baf24b08d82c5569cab0a76 111 SUPERFAMILY SSF46767 4 77 2.09E-14 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Amir_0853 75d63e572baf24b08d82c5569cab0a76 111 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 9 79 8.0E-16 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Amir_2531 3db9f3033ed93898be7845caccf366ed 758 Gene3D G3DSA:3.30.200.20 78 211 3.4E-82 T 14-10-2018 Amir_2531 3db9f3033ed93898be7845caccf366ed 758 Pfam PF16918 Protein kinase G tetratricopeptide repeat 569 687 1.5E-29 T 14-10-2018 IPR031636 Protein kinase G, tetratricopeptide repeat containing domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Amir_2531 3db9f3033ed93898be7845caccf366ed 758 SUPERFAMILY SSF56112 118 328 5.26E-34 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_2531 3db9f3033ed93898be7845caccf366ed 758 Gene3D G3DSA:1.25.40.10 567 621 1.7E-42 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2531 3db9f3033ed93898be7845caccf366ed 758 Gene3D G3DSA:1.10.510.10 212 375 3.4E-82 T 14-10-2018 Amir_2531 3db9f3033ed93898be7845caccf366ed 758 Gene3D G3DSA:1.25.40.10 622 714 1.7E-42 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2531 3db9f3033ed93898be7845caccf366ed 758 Gene3D G3DSA:1.25.40.10 725 754 7.6E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2531 3db9f3033ed93898be7845caccf366ed 758 SUPERFAMILY SSF48452 573 692 8.1E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2531 3db9f3033ed93898be7845caccf366ed 758 Pfam PF16919 Protein kinase G rubredoxin domain 56 126 3.4E-10 T 14-10-2018 IPR031634 Protein kinase G, rubredoxin domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Amir_2531 3db9f3033ed93898be7845caccf366ed 758 Pfam PF00069 Protein kinase domain 128 326 2.7E-21 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_2531 3db9f3033ed93898be7845caccf366ed 758 SMART SM00220 127 377 3.4E-12 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_2531 3db9f3033ed93898be7845caccf366ed 758 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 251 263 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_4136 662962afcb05c7a5dc368390f836c744 156 Gene3D G3DSA:3.10.450.50 17 156 1.7E-39 T 14-10-2018 Amir_4136 662962afcb05c7a5dc368390f836c744 156 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 39 154 3.0E-19 T 14-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 Amir_4136 662962afcb05c7a5dc368390f836c744 156 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 40 156 2.0E-22 T 14-10-2018 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 Amir_4136 662962afcb05c7a5dc368390f836c744 156 SUPERFAMILY SSF54427 39 153 6.88E-29 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_0627 9d789fdbca2fff3ac8c45218ffecf7dc 188 SUPERFAMILY SSF100950 9 182 1.21E-33 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Amir_0627 9d789fdbca2fff3ac8c45218ffecf7dc 188 Gene3D G3DSA:3.40.50.10420 7 186 4.2E-37 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Amir_0627 9d789fdbca2fff3ac8c45218ffecf7dc 188 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 42 179 1.3E-31 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Amir_0627 9d789fdbca2fff3ac8c45218ffecf7dc 188 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 6 179 6.5E-28 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Amir_5552 aeb35ac64d8023827cc723c7d8600f97 120 Pfam PF02575 YbaB/EbfC DNA-binding family 16 98 1.7E-11 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_5552 aeb35ac64d8023827cc723c7d8600f97 120 Gene3D G3DSA:3.30.1310.10 3 106 2.5E-8 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_5552 aeb35ac64d8023827cc723c7d8600f97 120 SUPERFAMILY SSF82607 9 98 2.09E-8 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_4593 13579a0260d864979b2970ae736b3e85 73 Pfam PF03621 MbtH-like protein 6 51 9.9E-23 T 14-10-2018 IPR005153 MbtH-like domain Amir_4593 13579a0260d864979b2970ae736b3e85 73 SUPERFAMILY SSF160582 6 67 4.71E-27 T 14-10-2018 IPR038020 MbtH-like domain superfamily Amir_4593 13579a0260d864979b2970ae736b3e85 73 Gene3D G3DSA:3.90.820.10 3 70 5.7E-31 T 14-10-2018 Amir_4593 13579a0260d864979b2970ae736b3e85 73 SMART SM00923 4 52 4.3E-20 T 14-10-2018 IPR005153 MbtH-like domain Amir_1362 84c775b030da1e8248fd3af2e6412b86 237 Pfam PF14428 SCP1.201-like deaminase 110 232 2.6E-36 T 14-10-2018 IPR032724 Deaminase, SCP1.201-like Amir_4081 d5cadb1c20e343fe31e2ded9b56bfd46 163 SUPERFAMILY SSF50475 11 163 1.28E-50 T 14-10-2018 Amir_4081 d5cadb1c20e343fe31e2ded9b56bfd46 163 Pfam PF01613 Flavin reductase like domain 15 162 5.1E-43 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amir_4081 d5cadb1c20e343fe31e2ded9b56bfd46 163 Gene3D G3DSA:2.30.110.10 4 163 1.4E-56 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_4081 d5cadb1c20e343fe31e2ded9b56bfd46 163 SMART SM00903 15 162 4.8E-62 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amir_2417 3eb932853ca08cd6c236842af3a00fff 281 SUPERFAMILY SSF102114 60 249 1.83E-30 T 14-10-2018 Amir_2417 3eb932853ca08cd6c236842af3a00fff 281 Pfam PF13353 4Fe-4S single cluster domain 55 169 2.2E-16 T 14-10-2018 Amir_2417 3eb932853ca08cd6c236842af3a00fff 281 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 46 276 2.7E-89 T 14-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 Amir_2417 3eb932853ca08cd6c236842af3a00fff 281 Gene3D G3DSA:3.20.20.70 42 281 1.8E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_2417 3eb932853ca08cd6c236842af3a00fff 281 ProSitePatterns PS01087 Radical activating enzymes signature. 57 78 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Amir_2417 3eb932853ca08cd6c236842af3a00fff 281 Pfam PF04055 Radical SAM superfamily 63 215 1.0E-28 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_2417 3eb932853ca08cd6c236842af3a00fff 281 PIRSF PIRSF000371 83 280 1.5E-42 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Amir_2417 3eb932853ca08cd6c236842af3a00fff 281 PIRSF PIRSF000371 51 89 1.1E-11 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Amir_5392 9ed6e1c9292d6562a12549467a757870 243 Pfam PF13699 Domain of unknown function (DUF4157) 84 161 2.5E-33 T 14-10-2018 IPR025295 Domain of unknown function DUF4157 Amir_4788 ba5df5314cfc6b719cc4506a7a3be4c0 294 Gene3D G3DSA:3.60.15.10 2 291 1.6E-72 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_4788 ba5df5314cfc6b719cc4506a7a3be4c0 294 SMART SM00849 58 267 3.2E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_4788 ba5df5314cfc6b719cc4506a7a3be4c0 294 Pfam PF00753 Metallo-beta-lactamase superfamily 59 267 1.1E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_4788 ba5df5314cfc6b719cc4506a7a3be4c0 294 SUPERFAMILY SSF56281 37 285 9.17E-36 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_0372 e5e1fcf6fac5577400e78c2b13769158 464 Pfam PF12821 Threonine/Serine exporter, ThrE 309 431 2.0E-17 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE Amir_0372 e5e1fcf6fac5577400e78c2b13769158 464 Pfam PF06738 Putative threonine/serine exporter 37 279 7.0E-63 T 14-10-2018 IPR010619 Putative threonine/serine exporter Amir_2159 a208288fb08935b343daf525bd37d8cb 321 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 8 287 2.1E-61 T 14-10-2018 IPR005693 Virulence factor Mce protein Amir_2159 a208288fb08935b343daf525bd37d8cb 321 Pfam PF02470 MlaD protein 34 106 4.1E-14 T 14-10-2018 IPR003399 Mce/MlaD Amir_2159 a208288fb08935b343daf525bd37d8cb 321 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 172 190 1.3E-12 T 14-10-2018 IPR005693 Virulence factor Mce protein Amir_2159 a208288fb08935b343daf525bd37d8cb 321 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 123 147 1.3E-12 T 14-10-2018 IPR005693 Virulence factor Mce protein Amir_2159 a208288fb08935b343daf525bd37d8cb 321 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 85 101 1.3E-12 T 14-10-2018 IPR005693 Virulence factor Mce protein Amir_2159 a208288fb08935b343daf525bd37d8cb 321 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 241 260 1.3E-12 T 14-10-2018 IPR005693 Virulence factor Mce protein Amir_2159 a208288fb08935b343daf525bd37d8cb 321 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 292 311 1.3E-12 T 14-10-2018 IPR005693 Virulence factor Mce protein Amir_3429 8cb197150ead805c6183cf5ad8b4cd10 457 SUPERFAMILY SSF75304 3 446 1.96E-108 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Amir_3429 8cb197150ead805c6183cf5ad8b4cd10 457 Pfam PF01425 Amidase 27 437 2.3E-90 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Amir_3429 8cb197150ead805c6183cf5ad8b4cd10 457 Gene3D G3DSA:3.90.1300.10 4 457 2.5E-122 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Amir_3429 8cb197150ead805c6183cf5ad8b4cd10 457 ProSitePatterns PS00571 Amidases signature. 153 184 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Amir_4387 388714f8ee2649ca935c2bc013b7092d 429 SUPERFAMILY SSF103473 18 411 6.41E-41 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4387 388714f8ee2649ca935c2bc013b7092d 429 Gene3D G3DSA:1.20.1250.20 16 209 1.1E-13 T 14-10-2018 Amir_4387 388714f8ee2649ca935c2bc013b7092d 429 Pfam PF07690 Major Facilitator Superfamily 46 286 8.6E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_4387 388714f8ee2649ca935c2bc013b7092d 429 Gene3D G3DSA:1.20.1250.20 228 413 6.6E-21 T 14-10-2018 Amir_3096 133d236840669628ec31d4f569557f80 121 SMART SM00418 36 113 5.7E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3096 133d236840669628ec31d4f569557f80 121 SUPERFAMILY SSF46785 24 116 3.93E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3096 133d236840669628ec31d4f569557f80 121 Pfam PF01022 Bacterial regulatory protein, arsR family 43 88 2.0E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3096 133d236840669628ec31d4f569557f80 121 Gene3D G3DSA:1.10.10.10 3 119 5.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3096 133d236840669628ec31d4f569557f80 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 86 101 3.1E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3096 133d236840669628ec31d4f569557f80 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 3.1E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3096 133d236840669628ec31d4f569557f80 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 69 3.1E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3096 133d236840669628ec31d4f569557f80 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 38 53 3.1E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_3542 d70538484a89ae690bdc05cc25b7e841 382 SUPERFAMILY SSF51735 13 182 9.85E-13 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3542 d70538484a89ae690bdc05cc25b7e841 382 Gene3D G3DSA:3.40.50.720 9 135 2.6E-6 T 14-10-2018 Amir_3542 d70538484a89ae690bdc05cc25b7e841 382 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 12 125 4.6E-11 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 Amir_3542 d70538484a89ae690bdc05cc25b7e841 382 SUPERFAMILY SSF55347 131 330 3.79E-34 T 14-10-2018 Amir_3542 d70538484a89ae690bdc05cc25b7e841 382 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 130 377 2.4E-41 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 Amir_3542 d70538484a89ae690bdc05cc25b7e841 382 Gene3D G3DSA:3.30.360.10 136 323 7.7E-35 T 14-10-2018 Amir_1820 3ec2e6e67f66d34594dd058d52f54c4f 330 Gene3D G3DSA:3.90.1720.10 137 328 2.7E-38 T 14-10-2018 Amir_1820 3ec2e6e67f66d34594dd058d52f54c4f 330 SUPERFAMILY SSF54001 209 323 3.92E-31 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amir_1820 3ec2e6e67f66d34594dd058d52f54c4f 330 Pfam PF00877 NlpC/P60 family 228 311 3.9E-18 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Amir_1979 4753b85d71269bb885ab927cc08822a4 542 SUPERFAMILY SSF53850 23 537 5.16E-72 T 14-10-2018 Amir_1979 4753b85d71269bb885ab927cc08822a4 542 Gene3D G3DSA:3.40.190.10 180 536 1.1E-91 T 14-10-2018 Amir_1979 4753b85d71269bb885ab927cc08822a4 542 Gene3D G3DSA:3.40.190.10 81 449 1.1E-91 T 14-10-2018 Amir_1979 4753b85d71269bb885ab927cc08822a4 542 Pfam PF13416 Bacterial extracellular solute-binding protein 79 388 2.3E-17 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_2704 754d92a46eed3ef17e105b7aab4579d3 163 Pfam PF01596 O-methyltransferase 12 142 4.4E-15 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 Amir_2704 754d92a46eed3ef17e105b7aab4579d3 163 SUPERFAMILY SSF53335 13 163 1.62E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_2704 754d92a46eed3ef17e105b7aab4579d3 163 Gene3D G3DSA:3.40.50.150 11 163 1.0E-45 T 14-10-2018 Amir_4330 ad1793117994c2b40ff0757f8f9966fa 427 SUPERFAMILY SSF53474 41 402 4.12E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0851 4179eff2973f634630ec46a337354036 1349 SUPERFAMILY SSF52540 30 796 1.94E-106 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0851 4179eff2973f634630ec46a337354036 1349 Gene3D G3DSA:3.40.50.300 29 209 5.9E-30 T 14-10-2018 Amir_0851 4179eff2973f634630ec46a337354036 1349 Pfam PF13361 UvrD-like helicase C-terminal domain 394 506 2.4E-7 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Amir_0851 4179eff2973f634630ec46a337354036 1349 Gene3D G3DSA:3.40.50.300 246 378 4.3E-32 T 14-10-2018 Amir_0851 4179eff2973f634630ec46a337354036 1349 Gene3D G3DSA:3.40.50.300 409 507 1.1E-14 T 14-10-2018 Amir_0851 4179eff2973f634630ec46a337354036 1349 SUPERFAMILY SSF52980 1153 1307 1.07E-6 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Amir_0851 4179eff2973f634630ec46a337354036 1349 Pfam PF13361 UvrD-like helicase C-terminal domain 618 771 1.7E-15 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Amir_0851 4179eff2973f634630ec46a337354036 1349 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1170 1318 3.2E-11 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Amir_0851 4179eff2973f634630ec46a337354036 1349 Pfam PF00580 UvrD/REP helicase N-terminal domain 34 351 3.7E-47 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Amir_1747 9f880e9bf75c15287c333c68da2fdd9a 352 SUPERFAMILY SSF53448 6 235 1.13E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_1747 9f880e9bf75c15287c333c68da2fdd9a 352 Gene3D G3DSA:3.90.550.10 2 246 3.9E-46 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_1747 9f880e9bf75c15287c333c68da2fdd9a 352 Pfam PF00535 Glycosyl transferase family 2 11 135 4.1E-27 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_1898 907926bbd199b70274836fda5a538656 142 Pfam PF14430 Immunity protein Imm1 13 135 4.2E-34 T 14-10-2018 IPR025680 Immunity protein Imm1 Amir_0104 24f8c38f3c444dcaf8c9a499c47a78c2 138 Pfam PF14430 Immunity protein Imm1 12 127 5.1E-29 T 14-10-2018 IPR025680 Immunity protein Imm1 Amir_5931 22f7aa71f901c24ee37b5db08cfce313 182 SUPERFAMILY SSF52540 13 148 1.74E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5931 22f7aa71f901c24ee37b5db08cfce313 182 Gene3D G3DSA:3.40.50.300 6 174 6.2E-13 T 14-10-2018 Amir_5931 22f7aa71f901c24ee37b5db08cfce313 182 Pfam PF13671 AAA domain 14 156 2.1E-11 T 14-10-2018 Amir_7013 321d99c9032b1e7df9792fa563935bc0 253 Pfam PF00011 Hsp20/alpha crystallin family 159 214 1.3E-8 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Amir_7013 321d99c9032b1e7df9792fa563935bc0 253 Pfam PF00011 Hsp20/alpha crystallin family 48 82 2.5E-4 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Amir_7013 321d99c9032b1e7df9792fa563935bc0 253 SUPERFAMILY SSF49764 32 214 4.53E-23 T 14-10-2018 IPR008978 HSP20-like chaperone Amir_4047 d211b3575a41c0bcdffb3d8889e4798a 231 SUPERFAMILY SSF46689 15 72 1.07E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4047 d211b3575a41c0bcdffb3d8889e4798a 231 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 77 171 1.0E-5 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 Amir_4047 d211b3575a41c0bcdffb3d8889e4798a 231 SUPERFAMILY SSF48498 82 223 3.89E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4047 d211b3575a41c0bcdffb3d8889e4798a 231 Gene3D G3DSA:1.10.357.10 2 229 3.4E-33 T 14-10-2018 Amir_4047 d211b3575a41c0bcdffb3d8889e4798a 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 5.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4053 3420140053533b3c4c04af2d866ca85a 129 Pfam PF12680 SnoaL-like domain 14 105 2.4E-11 T 14-10-2018 IPR037401 SnoaL-like domain Amir_4053 3420140053533b3c4c04af2d866ca85a 129 SUPERFAMILY SSF54427 9 120 6.48E-16 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_4053 3420140053533b3c4c04af2d866ca85a 129 Gene3D G3DSA:3.10.450.50 4 126 1.2E-26 T 14-10-2018 Amir_3160 3832bc12f722020dab01cd4b8271dbb9 404 Pfam PF13560 Helix-turn-helix domain 20 73 2.5E-6 T 14-10-2018 Amir_3160 3832bc12f722020dab01cd4b8271dbb9 404 SMART SM00530 22 77 1.7E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_3160 3832bc12f722020dab01cd4b8271dbb9 404 Gene3D G3DSA:1.10.260.40 17 79 2.6E-8 T 14-10-2018 Amir_3160 3832bc12f722020dab01cd4b8271dbb9 404 SUPERFAMILY SSF47413 20 82 3.85E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3160 3832bc12f722020dab01cd4b8271dbb9 404 Pfam PF06114 IrrE N-terminal-like domain 173 290 1.5E-16 T 14-10-2018 IPR010359 IrrE N-terminal-like domain Amir_2460 62cacc8bdb2f11d5133e24b55c15df3c 121 Pfam PF01638 HxlR-like helix-turn-helix 28 116 1.2E-23 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type Amir_2460 62cacc8bdb2f11d5133e24b55c15df3c 121 Gene3D G3DSA:1.10.10.10 6 119 4.7E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2460 62cacc8bdb2f11d5133e24b55c15df3c 121 SUPERFAMILY SSF46785 14 117 2.11E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_7096 516aad2ac2dac1d22654babbca1ac52d 183 SMART SM00393 103 182 3.1E-22 T 14-10-2018 IPR001374 R3H domain GO:0003676 Amir_7096 516aad2ac2dac1d22654babbca1ac52d 183 SUPERFAMILY SSF82708 136 181 2.35E-10 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 Amir_7096 516aad2ac2dac1d22654babbca1ac52d 183 Gene3D G3DSA:3.30.1370.50 118 183 4.1E-20 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 Amir_7096 516aad2ac2dac1d22654babbca1ac52d 183 Pfam PF01424 R3H domain 124 179 5.5E-14 T 14-10-2018 IPR001374 R3H domain GO:0003676 Amir_7096 516aad2ac2dac1d22654babbca1ac52d 183 Gene3D G3DSA:3.30.300.20 35 117 2.1E-13 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Amir_6426 7052712dd19a2de544ad56678d52f2f9 127 Gene3D G3DSA:1.20.120.1870 3 125 2.3E-15 T 14-10-2018 Amir_3666 0592c441be6cabbfe060e6b1b5f60ce4 199 SMART SM00248 72 101 1300.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 Amir_3666 0592c441be6cabbfe060e6b1b5f60ce4 199 SMART SM00248 39 68 0.03 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 Amir_3666 0592c441be6cabbfe060e6b1b5f60ce4 199 Gene3D G3DSA:1.25.40.20 2 126 9.4E-19 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Amir_3666 0592c441be6cabbfe060e6b1b5f60ce4 199 SUPERFAMILY SSF48403 10 95 9.59E-16 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Amir_1029 f7d80c1e7ae6b8b8a4313f35df329358 73 Pfam PF12277 Protein of unknown function (DUF3618) 2 47 1.1E-17 T 14-10-2018 IPR022062 Protein of unknown function DUF3618 Amir_0400 dca93cd7d1524480030318d49db5cd0e 347 Gene3D G3DSA:3.40.50.10490 5 179 1.0E-40 T 14-10-2018 Amir_0400 dca93cd7d1524480030318d49db5cd0e 347 Pfam PF01380 SIS domain 46 167 2.7E-12 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Amir_0400 dca93cd7d1524480030318d49db5cd0e 347 Pfam PF01380 SIS domain 207 318 3.2E-12 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Amir_0400 dca93cd7d1524480030318d49db5cd0e 347 SUPERFAMILY SSF53697 9 345 1.09E-65 T 14-10-2018 Amir_0400 dca93cd7d1524480030318d49db5cd0e 347 Gene3D G3DSA:3.40.50.10490 196 346 3.5E-33 T 14-10-2018 Amir_4521 52b88c5b1a39ff102ec261c29ff7e892 290 Pfam PF00561 alpha/beta hydrolase fold 35 136 1.3E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4521 52b88c5b1a39ff102ec261c29ff7e892 290 SUPERFAMILY SSF53474 31 288 2.63E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4521 52b88c5b1a39ff102ec261c29ff7e892 290 Gene3D G3DSA:3.40.50.1820 15 289 1.9E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4521 52b88c5b1a39ff102ec261c29ff7e892 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 2.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4521 52b88c5b1a39ff102ec261c29ff7e892 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 59 74 2.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4521 52b88c5b1a39ff102ec261c29ff7e892 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 2.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_1673 1f3daa6cee446d0d620dcd930f8d21f3 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 276 5.8E-46 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amir_1673 1f3daa6cee446d0d620dcd930f8d21f3 292 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 6 289 8.1E-113 T 14-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type Amir_5362 1b1bef2b04f6a0048de8eb24808c27e5 145 Gene3D G3DSA:3.30.565.10 15 137 3.4E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5362 1b1bef2b04f6a0048de8eb24808c27e5 145 Pfam PF13581 Histidine kinase-like ATPase domain 22 81 2.6E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_3408 5c75237430278df9370dc0236c9b0d34 239 Gene3D G3DSA:3.40.50.300 22 168 3.6E-21 T 14-10-2018 Amir_3408 5c75237430278df9370dc0236c9b0d34 239 SUPERFAMILY SSF52540 29 168 4.72E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3408 5c75237430278df9370dc0236c9b0d34 239 Pfam PF00265 Thymidine kinase 30 221 7.1E-23 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Amir_3408 5c75237430278df9370dc0236c9b0d34 239 PIRSF PIRSF035805 27 231 5.5E-36 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Amir_4879 dde45417909443369eb898b03a4f3f9b 460 Pfam PF04055 Radical SAM superfamily 72 244 1.6E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_4879 dde45417909443369eb898b03a4f3f9b 460 SUPERFAMILY SSF102114 29 445 1.14E-68 T 14-10-2018 Amir_4879 dde45417909443369eb898b03a4f3f9b 460 Gene3D G3DSA:3.80.30.20 24 373 1.8E-65 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amir_4879 dde45417909443369eb898b03a4f3f9b 460 SMART SM00729 66 287 1.7E-20 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amir_2588 feb9c653c9ee51f1120cd79effc45a23 203 Pfam PF17197 Domain of unknown function (DUF5134) 34 202 2.5E-34 T 14-10-2018 IPR033458 Protein of unknown function DUF5134 Amir_0107 9140e515e5e52d4aa40710251b45c741 297 Gene3D G3DSA:1.10.260.40 17 98 3.1E-9 T 14-10-2018 Amir_0107 9140e515e5e52d4aa40710251b45c741 297 Pfam PF13560 Helix-turn-helix domain 22 82 3.5E-13 T 14-10-2018 Amir_0107 9140e515e5e52d4aa40710251b45c741 297 SUPERFAMILY SSF47413 19 79 1.26E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_0107 9140e515e5e52d4aa40710251b45c741 297 SMART SM00530 25 80 5.6E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_6869 d5e90198b6dfd52c55929363c09ccfce 204 Pfam PF12079 Protein of unknown function (DUF3558) 17 169 2.2E-12 T 14-10-2018 IPR024520 Protein of unknown function DUF3558 Amir_0224 849be31464dbebecc5c6fa769a03560c 158 Gene3D G3DSA:1.20.1260.10 2 158 1.2E-46 T 14-10-2018 IPR012347 Ferritin-like Amir_0224 849be31464dbebecc5c6fa769a03560c 158 Pfam PF00210 Ferritin-like domain 22 156 1.2E-21 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Amir_0224 849be31464dbebecc5c6fa769a03560c 158 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 Amir_0224 849be31464dbebecc5c6fa769a03560c 158 PIRSF PIRSF005900 2 158 3.2E-43 T 14-10-2018 IPR002177 DNA-binding protein Dps Amir_0224 849be31464dbebecc5c6fa769a03560c 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 4.2E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps Amir_0224 849be31464dbebecc5c6fa769a03560c 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 135 153 4.2E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps Amir_0224 849be31464dbebecc5c6fa769a03560c 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 4.2E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps Amir_0224 849be31464dbebecc5c6fa769a03560c 158 SUPERFAMILY SSF47240 6 155 9.83E-48 T 14-10-2018 IPR009078 Ferritin-like superfamily Amir_1864 d811553fda78040765187d5ad378abf3 373 Pfam PF13407 Periplasmic binding protein domain 41 326 7.1E-65 T 14-10-2018 IPR025997 Periplasmic binding protein Amir_1864 d811553fda78040765187d5ad378abf3 373 SUPERFAMILY SSF53822 38 359 4.89E-67 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_1864 d811553fda78040765187d5ad378abf3 373 Gene3D G3DSA:3.40.50.2300 41 347 1.3E-130 T 14-10-2018 Amir_1864 d811553fda78040765187d5ad378abf3 373 Gene3D G3DSA:3.40.50.2300 143 368 1.3E-130 T 14-10-2018 Amir_0475 91581304e44d7b5c18ecf13f958fcf18 274 Pfam PF00149 Calcineurin-like phosphoesterase 18 194 3.1E-8 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amir_0475 91581304e44d7b5c18ecf13f958fcf18 274 PRINTS PR00114 Serine/threonine phosphatase family signature 54 81 3.4E-7 T 14-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_0475 91581304e44d7b5c18ecf13f958fcf18 274 PRINTS PR00114 Serine/threonine phosphatase family signature 17 44 3.4E-7 T 14-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_0475 91581304e44d7b5c18ecf13f958fcf18 274 SUPERFAMILY SSF56300 16 263 1.14E-31 T 14-10-2018 Amir_0475 91581304e44d7b5c18ecf13f958fcf18 274 Gene3D G3DSA:3.60.21.10 9 273 1.7E-46 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Amir_5501 f5ca42e8aaf35393f9e56b142fbb0a03 256 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 13 231 1.8E-32 T 14-10-2018 Amir_6880 b3c0ac4e861a2ed383622cfb6f118705 324 SUPERFAMILY SSF51735 1 210 6.52E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6880 b3c0ac4e861a2ed383622cfb6f118705 324 Gene3D G3DSA:3.40.50.720 1 247 1.8E-23 T 14-10-2018 Amir_4848 6fcb511ab4e36a17080f91ffd188d72a 880 Gene3D G3DSA:1.10.510.10 310 450 1.9E-17 T 14-10-2018 Amir_4848 6fcb511ab4e36a17080f91ffd188d72a 880 SUPERFAMILY SSF56112 223 472 6.07E-19 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_4848 6fcb511ab4e36a17080f91ffd188d72a 880 SMART SM00220 223 483 0.0038 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_4848 6fcb511ab4e36a17080f91ffd188d72a 880 SUPERFAMILY SSF158745 531 852 2.75E-23 T 14-10-2018 Amir_4848 6fcb511ab4e36a17080f91ffd188d72a 880 Gene3D G3DSA:3.30.200.20 223 309 1.9E-17 T 14-10-2018 Amir_4848 6fcb511ab4e36a17080f91ffd188d72a 880 Pfam PF05147 Lanthionine synthetase C-like protein 568 700 5.2E-6 T 14-10-2018 IPR007822 Lanthionine synthetase C-like Amir_4848 6fcb511ab4e36a17080f91ffd188d72a 880 SMART SM01260 527 856 1.4E-5 T 14-10-2018 IPR007822 Lanthionine synthetase C-like Amir_6766 8f80642f8c444d2e23aaaee201925f56 360 SUPERFAMILY SSF102405 133 353 5.8E-27 T 14-10-2018 Amir_3484 781be36eebcc9595021d4f70a3c27f1e 383 Gene3D G3DSA:1.20.1260.20 53 230 1.2E-5 T 14-10-2018 IPR038332 PPE superfamily Amir_4219 93247e0c01e4f8641d61c3d3fe7e3550 259 Gene3D G3DSA:3.40.190.80 138 258 4.9E-17 T 14-10-2018 Amir_4219 93247e0c01e4f8641d61c3d3fe7e3550 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 127 150 1.1E-16 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_4219 93247e0c01e4f8641d61c3d3fe7e3550 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 1.1E-16 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_4219 93247e0c01e4f8641d61c3d3fe7e3550 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 78 94 1.1E-16 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_4219 93247e0c01e4f8641d61c3d3fe7e3550 259 Pfam PF00459 Inositol monophosphatase family 5 252 8.6E-28 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Amir_4219 93247e0c01e4f8641d61c3d3fe7e3550 259 Gene3D G3DSA:3.30.540.10 1 137 3.0E-22 T 14-10-2018 Amir_4219 93247e0c01e4f8641d61c3d3fe7e3550 259 SUPERFAMILY SSF56655 4 254 5.1E-42 T 14-10-2018 Amir_0370 03b9b0e4972a0c1b9894bb92dd7eddc3 842 Pfam PF00723 Glycosyl hydrolases family 15 477 784 1.4E-35 T 14-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 Amir_0370 03b9b0e4972a0c1b9894bb92dd7eddc3 842 Gene3D G3DSA:3.30.70.1020 104 180 8.3E-48 T 14-10-2018 Amir_0370 03b9b0e4972a0c1b9894bb92dd7eddc3 842 SUPERFAMILY SSF56784 24 250 5.28E-34 T 14-10-2018 IPR036412 HAD-like superfamily Amir_0370 03b9b0e4972a0c1b9894bb92dd7eddc3 842 SUPERFAMILY SSF48208 461 840 2.27E-92 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_0370 03b9b0e4972a0c1b9894bb92dd7eddc3 842 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 23 250 2.9E-36 T 14-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 Amir_0370 03b9b0e4972a0c1b9894bb92dd7eddc3 842 Gene3D G3DSA:3.40.50.1000 25 236 8.3E-48 T 14-10-2018 IPR023214 HAD superfamily Amir_0370 03b9b0e4972a0c1b9894bb92dd7eddc3 842 Pfam PF02358 Trehalose-phosphatase 27 217 2.8E-30 T 14-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 Amir_0370 03b9b0e4972a0c1b9894bb92dd7eddc3 842 Gene3D G3DSA:1.50.10.10 476 842 2.3E-79 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Amir_0038 25b56f56e3b36e193cdfa7e000fa822e 298 Pfam PF01636 Phosphotransferase enzyme family 44 236 1.2E-16 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_0038 25b56f56e3b36e193cdfa7e000fa822e 298 Gene3D G3DSA:1.10.510.10 149 243 2.5E-7 T 14-10-2018 Amir_0038 25b56f56e3b36e193cdfa7e000fa822e 298 SUPERFAMILY SSF56112 7 262 3.06E-31 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_1003 4d4711661b3c1d2673589d94e12877ac 189 Pfam PF00857 Isochorismatase family 4 181 7.8E-28 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Amir_1003 4d4711661b3c1d2673589d94e12877ac 189 SUPERFAMILY SSF52499 3 181 1.44E-43 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Amir_1003 4d4711661b3c1d2673589d94e12877ac 189 Gene3D G3DSA:3.40.50.850 3 183 1.2E-57 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Amir_5052 e0cca0b9fc8f64a8bdd710ed24cc766e 733 Gene3D G3DSA:3.40.50.300 664 727 1.0E-7 T 14-10-2018 Amir_5052 e0cca0b9fc8f64a8bdd710ed24cc766e 733 Gene3D G3DSA:3.40.50.300 171 303 6.3E-10 T 14-10-2018 Amir_5052 e0cca0b9fc8f64a8bdd710ed24cc766e 733 SUPERFAMILY SSF52540 172 715 3.02E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5052 e0cca0b9fc8f64a8bdd710ed24cc766e 733 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 194 237 7.5E-5 T 14-10-2018 IPR018647 Domain of unknown function DUF2075 Amir_5052 e0cca0b9fc8f64a8bdd710ed24cc766e 733 Gene3D G3DSA:3.40.50.300 321 561 3.7E-7 T 14-10-2018 Amir_2049 0f359e29a321442adf98dcf6700f09dd 336 Gene3D G3DSA:3.40.190.120 152 261 1.6E-91 T 14-10-2018 Amir_2049 0f359e29a321442adf98dcf6700f09dd 336 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 50 317 4.4E-62 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Amir_2049 0f359e29a321442adf98dcf6700f09dd 336 Gene3D G3DSA:3.40.190.10 53 322 1.6E-91 T 14-10-2018 Amir_2049 0f359e29a321442adf98dcf6700f09dd 336 SUPERFAMILY SSF53850 51 322 2.71E-61 T 14-10-2018 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 337 346 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 PRINTS PR00359 B-class P450 signature 314 329 1.8E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 PRINTS PR00359 B-class P450 signature 286 313 1.8E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 PRINTS PR00359 B-class P450 signature 87 98 1.8E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 PRINTS PR00359 B-class P450 signature 267 278 1.8E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 PRINTS PR00359 B-class P450 signature 151 166 1.8E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 PRINTS PR00359 B-class P450 signature 335 344 1.8E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 PRINTS PR00359 B-class P450 signature 344 355 1.8E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 PRINTS PR00359 B-class P450 signature 185 207 1.8E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 PRINTS PR00359 B-class P450 signature 134 150 1.8E-60 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 SUPERFAMILY SSF48264 18 395 1.18E-92 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 PRINTS PR00385 P450 superfamily signature 267 278 1.2E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 PRINTS PR00385 P450 superfamily signature 232 249 1.2E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 PRINTS PR00385 P450 superfamily signature 344 355 1.2E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 PRINTS PR00385 P450 superfamily signature 335 344 1.2E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 Gene3D G3DSA:1.10.630.10 1 395 5.1E-122 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_2693 c1e91e17c6a6a280e7f02a5eef87739f 395 Pfam PF00067 Cytochrome P450 171 366 1.9E-24 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amir_4816 311cbcda636d77b8fc9ff977741c1c6c 630 SUPERFAMILY SSF55874 241 359 1.83E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4816 311cbcda636d77b8fc9ff977741c1c6c 630 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 251 357 4.2E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4816 311cbcda636d77b8fc9ff977741c1c6c 630 SMART SM00387 248 359 9.2E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_4816 311cbcda636d77b8fc9ff977741c1c6c 630 Gene3D G3DSA:3.30.565.10 213 357 3.7E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5220 fb021d23a109233b2a129a2c0b99438d 216 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 129 151 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Amir_5220 fb021d23a109233b2a129a2c0b99438d 216 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 1 209 1.2E-81 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Amir_5220 fb021d23a109233b2a129a2c0b99438d 216 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 27 41 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Amir_5220 fb021d23a109233b2a129a2c0b99438d 216 Gene3D G3DSA:3.20.20.70 1 211 3.7E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5220 fb021d23a109233b2a129a2c0b99438d 216 SUPERFAMILY SSF51366 2 210 2.5E-65 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Amir_5220 fb021d23a109233b2a129a2c0b99438d 216 Pfam PF00834 Ribulose-phosphate 3 epimerase family 2 196 2.9E-76 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Amir_5220 fb021d23a109233b2a129a2c0b99438d 216 PIRSF PIRSF001461 1 216 4.1E-90 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Amir_1768 d75edf1a73498bb92719c1df933a06b9 93 Pfam PF14019 Protein of unknown function (DUF4235) 7 83 1.1E-25 T 14-10-2018 IPR025329 Protein of unknown function DUF4235 Amir_3567 cddaae14f80c2385598aa8fbdc85fe16 302 Gene3D G3DSA:3.40.50.1820 27 301 1.1E-69 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3567 cddaae14f80c2385598aa8fbdc85fe16 302 Pfam PF07859 alpha/beta hydrolase fold 71 278 6.7E-56 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 Amir_3567 cddaae14f80c2385598aa8fbdc85fe16 302 SUPERFAMILY SSF53474 49 300 2.48E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4150 a288c68e0968c27eaf4b47c0a4367359 333 Gene3D G3DSA:2.80.10.50 192 332 1.1E-19 T 14-10-2018 Amir_4150 a288c68e0968c27eaf4b47c0a4367359 333 Pfam PF00652 Ricin-type beta-trefoil lectin domain 194 329 1.1E-13 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4150 a288c68e0968c27eaf4b47c0a4367359 333 SUPERFAMILY SSF117074 63 143 7.32E-13 T 14-10-2018 Amir_4150 a288c68e0968c27eaf4b47c0a4367359 333 Gene3D G3DSA:2.60.40.10 65 191 3.5E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_4150 a288c68e0968c27eaf4b47c0a4367359 333 SMART SM00458 191 332 4.1E-5 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_4150 a288c68e0968c27eaf4b47c0a4367359 333 SUPERFAMILY SSF50370 191 331 4.23E-19 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_4150 a288c68e0968c27eaf4b47c0a4367359 333 Pfam PF17210 SdrD B-like domain 69 170 1.2E-12 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_4205 56a4fdbf8e3f2b9350ddb2cab174c66a 374 PIRSF PIRSF006060 12 146 0.037 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amir_4205 56a4fdbf8e3f2b9350ddb2cab174c66a 374 PIRSF PIRSF006060 281 372 0.37 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amir_4205 56a4fdbf8e3f2b9350ddb2cab174c66a 374 PIRSF PIRSF006060 230 352 1.2 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amir_4205 56a4fdbf8e3f2b9350ddb2cab174c66a 374 PIRSF PIRSF006060 158 255 8.0E-4 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amir_3626 8ce71c688ef26282ee961629bcb3e183 158 Pfam PF13577 SnoaL-like domain 7 132 1.5E-15 T 14-10-2018 IPR037401 SnoaL-like domain Amir_3626 8ce71c688ef26282ee961629bcb3e183 158 Gene3D G3DSA:3.10.450.50 2 143 1.6E-21 T 14-10-2018 Amir_3626 8ce71c688ef26282ee961629bcb3e183 158 SUPERFAMILY SSF54427 6 152 3.06E-20 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_1079 e65cbb51958abc319d877d9300b0e741 830 SUPERFAMILY SSF52540 23 90 5.47E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1079 e65cbb51958abc319d877d9300b0e741 830 Gene3D G3DSA:1.25.40.10 315 528 3.0E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_1079 e65cbb51958abc319d877d9300b0e741 830 Gene3D G3DSA:3.40.50.300 18 78 3.4E-5 T 14-10-2018 Amir_5703 b041e44283c91e183eb4e0f8e9923aba 210 Pfam PF09534 Tryptophan-associated transmembrane protein (Trp_oprn_chp) 147 207 8.3E-18 T 14-10-2018 IPR019051 Trp biosynthesis associated, transmembrane protein, Oprn/Chp Amir_2047 917635d389d940c98b3d39cbfa77a8cc 859 SUPERFAMILY SSF48208 419 830 5.44E-47 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_2047 917635d389d940c98b3d39cbfa77a8cc 859 PIRSF PIRSF010631 9 856 9.1E-225 T 14-10-2018 IPR016007 Alpha-L-rhamnosidase Amir_2047 917635d389d940c98b3d39cbfa77a8cc 859 Gene3D G3DSA:1.50.10.10 113 858 4.7E-270 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Amir_2047 917635d389d940c98b3d39cbfa77a8cc 859 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 145 313 8.9E-59 T 14-10-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal Amir_2047 917635d389d940c98b3d39cbfa77a8cc 859 Pfam PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain 767 838 7.2E-17 T 14-10-2018 IPR035398 Alpha-L-rhamnosidase C-terminal domain Amir_2047 917635d389d940c98b3d39cbfa77a8cc 859 Gene3D G3DSA:2.60.40.10 18 112 1.3E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_2047 917635d389d940c98b3d39cbfa77a8cc 859 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 421 765 5.1E-110 T 14-10-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain Amir_2047 917635d389d940c98b3d39cbfa77a8cc 859 Pfam PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain 324 408 1.6E-22 T 14-10-2018 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain Amir_5282 fc9bcf9d62d100449dd00e4fda9b2f0c 124 Pfam PF14087 Domain of unknown function (DUF4267) 13 120 1.7E-22 T 14-10-2018 IPR025363 Protein of unknown function DUF4267 Amir_4312 be2493b609b5ae7c28f703dd126e655a 404 SUPERFAMILY SSF51679 26 376 7.98E-75 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_4312 be2493b609b5ae7c28f703dd126e655a 404 Gene3D G3DSA:3.20.20.30 23 379 3.3E-92 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_4312 be2493b609b5ae7c28f703dd126e655a 404 Pfam PF00296 Luciferase-like monooxygenase 37 344 2.9E-70 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_5342 128633cdac141e03d5c3bd14549c7622 473 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 156 461 1.4E-32 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 Amir_5342 128633cdac141e03d5c3bd14549c7622 473 SUPERFAMILY SSF54909 23 466 1.26E-87 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_5342 128633cdac141e03d5c3bd14549c7622 473 Pfam PF04261 Dyp-type peroxidase family 261 405 1.5E-8 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 Amir_3036 8b8a669f30f52641e3658e5f76481ae6 203 SUPERFAMILY SSF100950 47 203 8.79E-30 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Amir_3036 8b8a669f30f52641e3658e5f76481ae6 203 Gene3D G3DSA:3.40.50.10420 44 203 1.4E-45 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Amir_3036 8b8a669f30f52641e3658e5f76481ae6 203 Pfam PF02589 LUD domain 107 203 3.5E-18 T 14-10-2018 IPR003741 LUD domain Amir_0041 f22122702480b87195a915966fe1adc5 182 SUPERFAMILY SSF81296 27 123 2.24E-21 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_0041 f22122702480b87195a915966fe1adc5 182 Pfam PF04234 CopC domain 28 123 1.0E-23 T 14-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 Amir_0041 f22122702480b87195a915966fe1adc5 182 Gene3D G3DSA:2.60.40.1220 28 129 2.0E-23 T 14-10-2018 Amir_3739 8b25afd58559b9ee8078515cfd5fa94c 523 SMART SM00331 306 513 2.5E-29 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3739 8b25afd58559b9ee8078515cfd5fa94c 523 Gene3D G3DSA:3.60.40.10 298 514 1.8E-50 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3739 8b25afd58559b9ee8078515cfd5fa94c 523 SUPERFAMILY SSF52172 4 138 2.85E-33 T 14-10-2018 IPR011006 CheY-like superfamily Amir_3739 8b25afd58559b9ee8078515cfd5fa94c 523 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 332 513 3.2E-40 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3739 8b25afd58559b9ee8078515cfd5fa94c 523 Pfam PF00072 Response regulator receiver domain 11 123 3.7E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3739 8b25afd58559b9ee8078515cfd5fa94c 523 SUPERFAMILY SSF81606 320 509 1.67E-10 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_3739 8b25afd58559b9ee8078515cfd5fa94c 523 SMART SM00448 9 123 1.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_3739 8b25afd58559b9ee8078515cfd5fa94c 523 Gene3D G3DSA:3.40.50.12740 8 295 4.0E-38 T 14-10-2018 Amir_3617 5608e5743c4612b6624f02ef54c5ef0a 548 Pfam PF00171 Aldehyde dehydrogenase family 48 501 2.4E-64 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_3617 5608e5743c4612b6624f02ef54c5ef0a 548 Gene3D G3DSA:3.40.605.10 48 501 5.8E-81 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_3617 5608e5743c4612b6624f02ef54c5ef0a 548 SUPERFAMILY SSF53720 48 517 3.4E-73 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_3617 5608e5743c4612b6624f02ef54c5ef0a 548 Gene3D G3DSA:3.40.309.10 276 488 5.8E-81 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_1842 2bbfff92d986677543612216081c8664 323 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 46 3.0E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1842 2bbfff92d986677543612216081c8664 323 Gene3D G3DSA:3.40.50.2300 76 298 1.5E-42 T 14-10-2018 Amir_1842 2bbfff92d986677543612216081c8664 323 SUPERFAMILY SSF47413 2 52 7.78E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1842 2bbfff92d986677543612216081c8664 323 Gene3D G3DSA:3.40.50.2300 157 282 1.5E-42 T 14-10-2018 Amir_1842 2bbfff92d986677543612216081c8664 323 Pfam PF13377 Periplasmic binding protein-like domain 166 322 1.9E-26 T 14-10-2018 Amir_1842 2bbfff92d986677543612216081c8664 323 SMART SM00354 1 68 1.3E-8 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amir_1842 2bbfff92d986677543612216081c8664 323 SUPERFAMILY SSF53822 55 308 1.13E-38 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_1842 2bbfff92d986677543612216081c8664 323 Gene3D G3DSA:1.10.260.40 1 57 1.5E-14 T 14-10-2018 Amir_1730 49ef14608655a3e14a0b8719d445c27a 467 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 15 467 1.2E-119 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Amir_1730 49ef14608655a3e14a0b8719d445c27a 467 Pfam PF13727 CoA-binding domain 74 208 2.3E-6 T 14-10-2018 Amir_1730 49ef14608655a3e14a0b8719d445c27a 467 Pfam PF02397 Bacterial sugar transferase 274 461 6.3E-65 T 14-10-2018 IPR003362 Bacterial sugar transferase Amir_6331 a54ec1b4b748c41a3a59c3078fba294b 102 Pfam PF02467 Transcription factor WhiB 34 97 4.8E-27 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain Amir_6331 a54ec1b4b748c41a3a59c3078fba294b 102 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 19 102 19.205 T 14-10-2018 IPR003482 Transcription factor WhiB Amir_6618 42f0d2565a92c88316e5675c516ac572 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6618 42f0d2565a92c88316e5675c516ac572 156 SUPERFAMILY SSF47973 1 149 1.31E-57 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Amir_6618 42f0d2565a92c88316e5675c516ac572 156 Gene3D G3DSA:1.10.455.10 2 156 8.1E-56 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Amir_6618 42f0d2565a92c88316e5675c516ac572 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.2E-59 T 14-10-2018 IPR023798 Ribosomal protein S7 domain Amir_6618 42f0d2565a92c88316e5675c516ac572 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.4E-64 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Amir_6618 42f0d2565a92c88316e5675c516ac572 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.846 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Amir_6618 42f0d2565a92c88316e5675c516ac572 156 PIRSF PIRSF002122 5 156 2.7E-55 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Amir_5316 e38c6d04f2e3931bce2cc8a98c97578f 232 Gene3D G3DSA:2.40.33.20 1 226 3.3E-66 T 14-10-2018 Amir_5316 e38c6d04f2e3931bce2cc8a98c97578f 232 Pfam PF03473 MOSC domain 54 165 7.9E-21 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 Amir_5316 e38c6d04f2e3931bce2cc8a98c97578f 232 SUPERFAMILY SSF50800 1 213 1.41E-56 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Amir_3378 48e459cf7bcb9880f8c67bfe44045e87 276 SUPERFAMILY SSF49265 184 273 5.64E-11 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 Amir_3378 48e459cf7bcb9880f8c67bfe44045e87 276 Gene3D G3DSA:2.60.40.10 188 272 5.1E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_3378 48e459cf7bcb9880f8c67bfe44045e87 276 SMART SM00060 189 262 7.0E-6 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 Amir_2859 cfd8807376b7a4bbca397fa625cb3b69 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2859 cfd8807376b7a4bbca397fa625cb3b69 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2859 cfd8807376b7a4bbca397fa625cb3b69 186 SUPERFAMILY SSF46689 4 73 1.23E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2859 cfd8807376b7a4bbca397fa625cb3b69 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 7.4E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2859 cfd8807376b7a4bbca397fa625cb3b69 186 Gene3D G3DSA:1.10.357.10 3 181 3.9E-24 T 14-10-2018 Amir_4005 2feb45d29f9ed8ddb01de8ee3e59b456 396 SUPERFAMILY SSF51905 2 366 6.35E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4005 2feb45d29f9ed8ddb01de8ee3e59b456 396 Gene3D G3DSA:3.50.50.60 6 338 1.4E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4005 2feb45d29f9ed8ddb01de8ee3e59b456 396 Pfam PF01494 FAD binding domain 2 320 7.3E-19 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_4005 2feb45d29f9ed8ddb01de8ee3e59b456 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 7.5E-11 T 14-10-2018 Amir_4005 2feb45d29f9ed8ddb01de8ee3e59b456 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 7.5E-11 T 14-10-2018 Amir_4005 2feb45d29f9ed8ddb01de8ee3e59b456 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 7.5E-11 T 14-10-2018 Amir_4005 2feb45d29f9ed8ddb01de8ee3e59b456 396 Gene3D G3DSA:3.30.9.50 39 271 1.4E-65 T 14-10-2018 Amir_2916 96eda2ef7eecd441a9cdd5f9c1450b3a 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 259 6.8E-52 T 14-10-2018 Amir_2916 96eda2ef7eecd441a9cdd5f9c1450b3a 261 Gene3D G3DSA:3.40.50.720 2 260 2.2E-72 T 14-10-2018 Amir_2916 96eda2ef7eecd441a9cdd5f9c1450b3a 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 3.9E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2916 96eda2ef7eecd441a9cdd5f9c1450b3a 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 3.9E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2916 96eda2ef7eecd441a9cdd5f9c1450b3a 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 3.9E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2916 96eda2ef7eecd441a9cdd5f9c1450b3a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 4.4E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2916 96eda2ef7eecd441a9cdd5f9c1450b3a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 4.4E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2916 96eda2ef7eecd441a9cdd5f9c1450b3a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 4.4E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2916 96eda2ef7eecd441a9cdd5f9c1450b3a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 4.4E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2916 96eda2ef7eecd441a9cdd5f9c1450b3a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 4.4E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2916 96eda2ef7eecd441a9cdd5f9c1450b3a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 4.4E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_2916 96eda2ef7eecd441a9cdd5f9c1450b3a 261 SUPERFAMILY SSF51735 18 260 8.55E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2096 47f6c23ae30c966e0496af59b2692968 125 Gene3D G3DSA:2.30.29.50 7 125 6.4E-39 T 14-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily Amir_2096 47f6c23ae30c966e0496af59b2692968 125 Pfam PF08000 Bacterial PH domain 6 123 2.6E-40 T 14-10-2018 IPR012544 Bacterial Pleckstrin homology domain Amir_2096 47f6c23ae30c966e0496af59b2692968 125 SUPERFAMILY SSF50729 13 124 8.61E-37 T 14-10-2018 Amir_1138 63e23ac38f0a042ffd5696d7cb00ea7c 220 Gene3D G3DSA:3.30.40.60 119 197 1.9E-20 T 14-10-2018 Amir_1138 63e23ac38f0a042ffd5696d7cb00ea7c 220 Pfam PF14279 HNH endonuclease 136 182 5.2E-13 T 14-10-2018 IPR029471 HNH endonuclease 5 Amir_1138 63e23ac38f0a042ffd5696d7cb00ea7c 220 SMART SM00507 123 172 8.2E-15 T 14-10-2018 IPR003615 HNH nuclease Amir_5757 571fe0e5ebb9bee67b4bc067b8a22daa 215 Pfam PF04472 Cell division protein SepF 127 198 3.0E-27 T 14-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 Amir_5757 571fe0e5ebb9bee67b4bc067b8a22daa 215 Hamap MF_01197 Cell division protein SepF [sepF]. 1 206 21.893 T 14-10-2018 IPR023052 Cell division protein SepF GO:0090529 Amir_5757 571fe0e5ebb9bee67b4bc067b8a22daa 215 Gene3D G3DSA:3.30.110.150 125 206 6.2E-29 T 14-10-2018 IPR038594 SepF-like superfamily Amir_0614 3b84547e1f32a6831b49ffbb54a5e7be 286 Gene3D G3DSA:1.10.3720.10 2 276 6.3E-57 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0614 3b84547e1f32a6831b49ffbb54a5e7be 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 271 3.6E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0614 3b84547e1f32a6831b49ffbb54a5e7be 286 SUPERFAMILY SSF161098 5 286 2.07E-65 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3067 c7bf5e5252b49aa961359d8813d1e72a 370 SUPERFAMILY SSF161098 141 348 3.05E-11 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3067 c7bf5e5252b49aa961359d8813d1e72a 370 Gene3D G3DSA:1.10.3720.10 132 360 1.1E-14 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3067 c7bf5e5252b49aa961359d8813d1e72a 370 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 160 363 1.1E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_5309 b1d5811c5ae35cd1c102af5685291b00 447 Gene3D G3DSA:3.40.190.10 150 434 4.7E-124 T 14-10-2018 Amir_5309 b1d5811c5ae35cd1c102af5685291b00 447 SUPERFAMILY SSF53850 18 440 2.64E-67 T 14-10-2018 Amir_5309 b1d5811c5ae35cd1c102af5685291b00 447 Pfam PF01547 Bacterial extracellular solute-binding protein 44 337 2.4E-47 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_5309 b1d5811c5ae35cd1c102af5685291b00 447 Gene3D G3DSA:3.40.190.10 52 405 4.7E-124 T 14-10-2018 Amir_7052 dfc56a6ad5d73960d20fffaa44db5fc7 402 Pfam PF01594 AI-2E family transporter 26 347 9.0E-63 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like Amir_1986 119e834d4276b0a043abcf20232340c9 120 PIRSF PIRSF016498 1 120 4.9E-18 T 14-10-2018 IPR018699 Protein of unknown function DUF2203 Amir_1986 119e834d4276b0a043abcf20232340c9 120 Pfam PF09969 Uncharacterized conserved protein (DUF2203) 3 119 5.8E-31 T 14-10-2018 IPR018699 Protein of unknown function DUF2203 Amir_4086 7ff0d19acc5e55ac7ba2704028c0f2f3 417 Gene3D G3DSA:1.20.1250.20 216 397 3.5E-14 T 14-10-2018 Amir_4086 7ff0d19acc5e55ac7ba2704028c0f2f3 417 Gene3D G3DSA:1.20.1250.20 17 204 3.6E-19 T 14-10-2018 Amir_4086 7ff0d19acc5e55ac7ba2704028c0f2f3 417 SUPERFAMILY SSF103473 17 395 1.44E-45 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4086 7ff0d19acc5e55ac7ba2704028c0f2f3 417 Pfam PF07690 Major Facilitator Superfamily 26 339 1.1E-31 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2973 acbcea22ed57b98755b9a651d4940af4 366 Gene3D G3DSA:3.30.360.10 130 345 3.8E-33 T 14-10-2018 Amir_2973 acbcea22ed57b98755b9a651d4940af4 366 Gene3D G3DSA:3.40.50.720 1 127 2.7E-29 T 14-10-2018 Amir_2973 acbcea22ed57b98755b9a651d4940af4 366 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 121 1.4E-15 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amir_2973 acbcea22ed57b98755b9a651d4940af4 366 SUPERFAMILY SSF51735 4 154 1.35E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2973 acbcea22ed57b98755b9a651d4940af4 366 SUPERFAMILY SSF55347 130 288 1.47E-27 T 14-10-2018 Amir_4640 4d9f63a2f5e178331847715b1c8e5177 280 Pfam PF12697 Alpha/beta hydrolase family 45 204 3.2E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4640 4d9f63a2f5e178331847715b1c8e5177 280 SUPERFAMILY SSF53474 9 144 8.25E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4640 4d9f63a2f5e178331847715b1c8e5177 280 Gene3D G3DSA:3.40.50.1820 16 144 1.7E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1938 f7792f00f51ffad053122572d47ecb63 363 Gene3D G3DSA:3.30.565.10 243 358 1.0E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1938 f7792f00f51ffad053122572d47ecb63 363 SUPERFAMILY SSF55874 275 349 1.28E-5 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_1938 f7792f00f51ffad053122572d47ecb63 363 Pfam PF07730 Histidine kinase 178 245 3.8E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_2161 863f7f18761d08b9a8eeb3ad99295438 329 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 9 305 1.8E-59 T 14-10-2018 IPR005693 Virulence factor Mce protein Amir_2161 863f7f18761d08b9a8eeb3ad99295438 329 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 177 287 2.1E-7 T 14-10-2018 IPR024516 Mammalian cell entry, C-terminal Amir_2161 863f7f18761d08b9a8eeb3ad99295438 329 Pfam PF02470 MlaD protein 39 117 1.5E-17 T 14-10-2018 IPR003399 Mce/MlaD Amir_2412 fbe7ef9353a2613e2de398de88f4f738 238 Gene3D G3DSA:3.40.109.10 89 227 4.1E-8 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_1457 9b233d37cc68fc9f54e1dc45f0ea8060 232 Gene3D G3DSA:3.30.2170.10 13 232 3.9E-77 T 14-10-2018 Amir_1457 9b233d37cc68fc9f54e1dc45f0ea8060 232 Hamap MF_00801 Endonuclease V [nfi]. 23 232 29.964 T 14-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 Amir_1457 9b233d37cc68fc9f54e1dc45f0ea8060 232 Pfam PF04493 Endonuclease V 47 224 1.8E-65 T 14-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 Amir_4763 d848773d70cd08ee771e34de569e3d7b 149 Pfam PF07681 DoxX 23 98 1.5E-8 T 14-10-2018 IPR032808 DoxX family Amir_3686 e1763742fafe8cb7ee772118a5375d7a 671 Pfam PF00668 Condensation domain 57 350 1.7E-14 T 14-10-2018 IPR001242 Condensation domain Amir_3686 e1763742fafe8cb7ee772118a5375d7a 671 SUPERFAMILY SSF52777 212 460 2.89E-18 T 14-10-2018 Amir_3686 e1763742fafe8cb7ee772118a5375d7a 671 Gene3D G3DSA:3.30.300.30 482 565 6.5E-6 T 14-10-2018 Amir_3686 e1763742fafe8cb7ee772118a5375d7a 671 SUPERFAMILY SSF52777 24 183 7.41E-19 T 14-10-2018 Amir_3686 e1763742fafe8cb7ee772118a5375d7a 671 Gene3D G3DSA:3.30.559.30 218 466 5.1E-16 T 14-10-2018 Amir_3686 e1763742fafe8cb7ee772118a5375d7a 671 Gene3D G3DSA:3.30.559.10 22 217 1.5E-17 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amir_3130 bf490f19921566acda904142097b90d6 88 Gene3D G3DSA:1.10.1200.10 1 82 5.4E-13 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3130 bf490f19921566acda904142097b90d6 88 Pfam PF00550 Phosphopantetheine attachment site 26 77 1.8E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_3130 bf490f19921566acda904142097b90d6 88 SUPERFAMILY SSF47336 26 84 1.28E-10 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2694 20672a169ff2e481a8018e7de04271a4 80 SUPERFAMILY SSF54862 11 69 2.72E-8 T 14-10-2018 Amir_2694 20672a169ff2e481a8018e7de04271a4 80 Gene3D G3DSA:3.30.70.20 7 70 1.6E-13 T 14-10-2018 Amir_2694 20672a169ff2e481a8018e7de04271a4 80 PRINTS PR00352 3Fe-4S ferredoxin signature 53 65 9.1E-5 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Amir_2694 20672a169ff2e481a8018e7de04271a4 80 PRINTS PR00352 3Fe-4S ferredoxin signature 25 35 9.1E-5 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Amir_2694 20672a169ff2e481a8018e7de04271a4 80 PRINTS PR00352 3Fe-4S ferredoxin signature 14 25 9.1E-5 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Amir_2694 20672a169ff2e481a8018e7de04271a4 80 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 14 67 8.0E-11 T 14-10-2018 Amir_0737 b5644aeac3a0a271fc281d88dc82a1cc 157 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 12 60 1.7E-5 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Amir_0737 b5644aeac3a0a271fc281d88dc82a1cc 157 SUPERFAMILY SSF143120 12 61 2.22E-6 T 14-10-2018 IPR036165 YefM-like superfamily Amir_3332 ed378437ae694d316fa878b6ea135ace 130 Gene3D G3DSA:2.60.120.10 5 110 4.6E-30 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_3332 ed378437ae694d316fa878b6ea135ace 130 SUPERFAMILY SSF51182 4 115 3.9E-20 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_3332 ed378437ae694d316fa878b6ea135ace 130 Pfam PF07883 Cupin domain 42 98 1.4E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Amir_5250 31d91d18753479d9109c9a6cc7981b74 365 SUPERFAMILY SSF53092 5 136 1.45E-22 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Amir_5250 31d91d18753479d9109c9a6cc7981b74 365 Pfam PF01321 Creatinase/Prolidase N-terminal domain 6 137 6.9E-23 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Amir_5250 31d91d18753479d9109c9a6cc7981b74 365 Pfam PF00557 Metallopeptidase family M24 145 349 6.6E-64 T 14-10-2018 IPR000994 Peptidase M24 Amir_5250 31d91d18753479d9109c9a6cc7981b74 365 Gene3D G3DSA:3.40.350.10 4 136 2.0E-28 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Amir_5250 31d91d18753479d9109c9a6cc7981b74 365 SUPERFAMILY SSF55920 136 365 6.54E-75 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Amir_5250 31d91d18753479d9109c9a6cc7981b74 365 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 295 307 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Amir_5250 31d91d18753479d9109c9a6cc7981b74 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 197 210 2.1E-8 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_5250 31d91d18753479d9109c9a6cc7981b74 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 317 329 2.1E-8 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_5250 31d91d18753479d9109c9a6cc7981b74 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 219 235 2.1E-8 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amir_5250 31d91d18753479d9109c9a6cc7981b74 365 Gene3D G3DSA:3.90.230.10 137 365 2.3E-78 T 14-10-2018 Amir_7010 33ed4cfd8a088757bba1ba99d52120b6 302 SUPERFAMILY SSF51735 1 258 3.75E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_7010 33ed4cfd8a088757bba1ba99d52120b6 302 Gene3D G3DSA:3.40.50.720 2 267 2.3E-44 T 14-10-2018 Amir_7010 33ed4cfd8a088757bba1ba99d52120b6 302 Pfam PF00106 short chain dehydrogenase 6 205 1.5E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7010 33ed4cfd8a088757bba1ba99d52120b6 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7010 33ed4cfd8a088757bba1ba99d52120b6 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 1.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7010 33ed4cfd8a088757bba1ba99d52120b6 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_7010 33ed4cfd8a088757bba1ba99d52120b6 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 1.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6134 17132afce76fe009186e9bee5fa8713b 144 Pfam PF10739 Protein of unknown function (DUF2550) 12 137 1.2E-45 T 14-10-2018 IPR019675 Protein of unknown function DUF2550 Amir_3328 321433bd2c2b526aa22a8121fa9409bc 85 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 18 82 9.6E-11 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D Amir_4755 8141861711ff67837eee38785eae8d44 228 SMART SM00418 19 103 0.0052 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_4755 8141861711ff67837eee38785eae8d44 228 Gene3D G3DSA:1.10.10.10 15 131 3.4E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4755 8141861711ff67837eee38785eae8d44 228 SUPERFAMILY SSF46785 19 199 1.25E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4755 8141861711ff67837eee38785eae8d44 228 Pfam PF12840 Helix-turn-helix domain 18 73 7.1E-7 T 14-10-2018 Amir_6587 ec59a10579d3e79b59a5edb631666073 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 2.0E-9 T 14-10-2018 Amir_6587 ec59a10579d3e79b59a5edb631666073 37 Pfam PF00444 Ribosomal protein L36 2 37 9.5E-17 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6587 ec59a10579d3e79b59a5edb631666073 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6587 ec59a10579d3e79b59a5edb631666073 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 16.329 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6587 ec59a10579d3e79b59a5edb631666073 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 2 37 5.1E-21 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6587 ec59a10579d3e79b59a5edb631666073 37 SUPERFAMILY SSF57840 2 37 2.62E-15 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_2817 365c2a2e82d132470499346953b8928b 340 Pfam PF04055 Radical SAM superfamily 14 159 2.9E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_2817 365c2a2e82d132470499346953b8928b 340 SUPERFAMILY SSF102114 7 302 1.19E-42 T 14-10-2018 Amir_2817 365c2a2e82d132470499346953b8928b 340 Gene3D G3DSA:3.20.20.70 8 307 2.8E-35 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_3290 8c128c69808e896413e9a5cc8adde1a6 523 Gene3D G3DSA:3.50.50.60 9 343 5.2E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3290 8c128c69808e896413e9a5cc8adde1a6 523 SUPERFAMILY SSF51905 7 371 8.79E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_3290 8c128c69808e896413e9a5cc8adde1a6 523 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.0E-33 T 14-10-2018 Amir_3290 8c128c69808e896413e9a5cc8adde1a6 523 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.0E-33 T 14-10-2018 Amir_3290 8c128c69808e896413e9a5cc8adde1a6 523 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 314 332 2.0E-33 T 14-10-2018 Amir_3290 8c128c69808e896413e9a5cc8adde1a6 523 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 2.0E-33 T 14-10-2018 Amir_3290 8c128c69808e896413e9a5cc8adde1a6 523 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 2.0E-33 T 14-10-2018 Amir_3290 8c128c69808e896413e9a5cc8adde1a6 523 Pfam PF01494 FAD binding domain 7 345 3.5E-61 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Amir_3290 8c128c69808e896413e9a5cc8adde1a6 523 Gene3D G3DSA:3.30.70.2450 187 270 5.2E-83 T 14-10-2018 Amir_0791 5ed6f14227ca296ed0a8ea906ae6a735 434 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 74 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Amir_0791 5ed6f14227ca296ed0a8ea906ae6a735 434 SUPERFAMILY SSF103473 3 383 9.68E-51 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_0791 5ed6f14227ca296ed0a8ea906ae6a735 434 Pfam PF07690 Major Facilitator Superfamily 11 342 3.3E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_0791 5ed6f14227ca296ed0a8ea906ae6a735 434 Gene3D G3DSA:1.20.1250.20 2 379 3.0E-48 T 14-10-2018 Amir_4078 2ac57fe15419b5fe8920d628c75b2483 191 SUPERFAMILY SSF69118 13 165 8.86E-37 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amir_4078 2ac57fe15419b5fe8920d628c75b2483 191 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 43 75 2.8E-8 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Amir_4078 2ac57fe15419b5fe8920d628c75b2483 191 Pfam PF02627 Carboxymuconolactone decarboxylase family 32 75 1.8E-5 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Amir_4078 2ac57fe15419b5fe8920d628c75b2483 191 Gene3D G3DSA:1.20.1290.10 44 171 3.1E-32 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amir_6970 00763d98365a535883e74af27b79c515 221 Gene3D G3DSA:3.30.110.170 20 212 6.2E-24 T 14-10-2018 Amir_6970 00763d98365a535883e74af27b79c515 221 Gene3D G3DSA:3.30.70.2970 29 128 6.2E-24 T 14-10-2018 Amir_6970 00763d98365a535883e74af27b79c515 221 Pfam PF04402 Protein of unknown function (DUF541) 20 217 1.4E-28 T 14-10-2018 IPR007497 Protein of unknown function DUF541 Amir_5366 f3526ac575aab7245787e6fdc8ca828c 317 Gene3D G3DSA:3.20.20.100 1 317 7.2E-76 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_5366 f3526ac575aab7245787e6fdc8ca828c 317 SUPERFAMILY SSF51430 3 316 1.31E-68 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_5366 f3526ac575aab7245787e6fdc8ca828c 317 Pfam PF00248 Aldo/keto reductase family 14 316 4.2E-48 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_5320 bded61c953b5185eba2bc9ba42478f54 675 SUPERFAMILY SSF54637 529 674 1.3E-32 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_5320 bded61c953b5185eba2bc9ba42478f54 675 Gene3D G3DSA:3.40.605.10 10 486 2.4E-149 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amir_5320 bded61c953b5185eba2bc9ba42478f54 675 Pfam PF00171 Aldehyde dehydrogenase family 12 440 2.7E-59 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amir_5320 bded61c953b5185eba2bc9ba42478f54 675 Gene3D G3DSA:3.10.129.10 532 675 1.4E-38 T 14-10-2018 Amir_5320 bded61c953b5185eba2bc9ba42478f54 675 Gene3D G3DSA:3.40.309.10 259 474 2.4E-149 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amir_5320 bded61c953b5185eba2bc9ba42478f54 675 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 4 673 0.0 T 14-10-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 Amir_5320 bded61c953b5185eba2bc9ba42478f54 675 SUPERFAMILY SSF53720 4 503 7.33E-80 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amir_5320 bded61c953b5185eba2bc9ba42478f54 675 Pfam PF01575 MaoC like domain 540 650 2.7E-20 T 14-10-2018 IPR002539 MaoC-like dehydratase domain Amir_3007 c21ef93799109e55f098a3d21daca79c 801 Pfam PF02687 FtsX-like permease family 703 788 1.6E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amir_3007 c21ef93799109e55f098a3d21daca79c 801 Pfam PF02687 FtsX-like permease family 265 358 9.5E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amir_3779 2f913823ef51c6c398c1a731adb348b2 137 SUPERFAMILY SSF54593 3 132 7.36E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_3779 2f913823ef51c6c398c1a731adb348b2 137 Gene3D G3DSA:3.10.180.10 9 137 5.8E-38 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_3779 2f913823ef51c6c398c1a731adb348b2 137 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 131 2.8E-11 T 14-10-2018 IPR028973 PhnB-like Amir_5152 94b7e4794e6bfffd8b09e91a6ffa6aac 108 Gene3D G3DSA:2.102.10.10 1 108 4.1E-31 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Amir_5152 94b7e4794e6bfffd8b09e91a6ffa6aac 108 Pfam PF00355 Rieske [2Fe-2S] domain 4 90 6.5E-16 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Amir_5152 94b7e4794e6bfffd8b09e91a6ffa6aac 108 SUPERFAMILY SSF50022 3 104 3.67E-26 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Amir_2052 59a73a0fc8bbf834c8a693d502102bff 216 Gene3D G3DSA:1.10.3720.10 10 208 2.5E-22 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2052 59a73a0fc8bbf834c8a693d502102bff 216 SUPERFAMILY SSF161098 11 198 6.93E-28 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2052 59a73a0fc8bbf834c8a693d502102bff 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 205 3.6E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0189 2314f001ae3c9998b7ef4fbcc4eb0ff0 313 Gene3D G3DSA:3.40.50.1460 1 222 6.8E-25 T 14-10-2018 Amir_0189 2314f001ae3c9998b7ef4fbcc4eb0ff0 313 SUPERFAMILY SSF52129 2 149 1.26E-9 T 14-10-2018 IPR029030 Caspase-like domain superfamily Amir_0189 2314f001ae3c9998b7ef4fbcc4eb0ff0 313 Pfam PF00656 Caspase domain 2 139 2.0E-13 T 14-10-2018 Amir_3355 f8f49a8a436531074deb04068eafff2b 321 Gene3D G3DSA:3.40.50.1820 87 302 1.9E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3355 f8f49a8a436531074deb04068eafff2b 321 Pfam PF08386 TAP-like protein 226 318 3.6E-17 T 14-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal Amir_3355 f8f49a8a436531074deb04068eafff2b 321 SUPERFAMILY SSF53474 69 293 1.86E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_7018 8f0352c7f594b01bf518c6588153c175 447 SUPERFAMILY SSF52743 22 300 4.19E-72 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_7018 8f0352c7f594b01bf518c6588153c175 447 PRINTS PR00723 Subtilisin serine protease family (S8) signature 41 60 2.4E-15 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_7018 8f0352c7f594b01bf518c6588153c175 447 PRINTS PR00723 Subtilisin serine protease family (S8) signature 81 94 2.4E-15 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_7018 8f0352c7f594b01bf518c6588153c175 447 PRINTS PR00723 Subtilisin serine protease family (S8) signature 240 256 2.4E-15 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Amir_7018 8f0352c7f594b01bf518c6588153c175 447 Pfam PF00082 Subtilase family 41 291 2.5E-33 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amir_7018 8f0352c7f594b01bf518c6588153c175 447 Gene3D G3DSA:3.40.50.200 7 306 3.4E-74 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amir_0113 23914127dbd1d2df527b37aa046c292c 342 Pfam PF13845 Septum formation 46 262 3.7E-68 T 14-10-2018 IPR026004 Septum formation-related domain Amir_3601 89bc9dcc1755e6af73a61f2d49fe49d8 73 Gene3D G3DSA:3.90.820.10 1 69 3.5E-34 T 14-10-2018 Amir_3601 89bc9dcc1755e6af73a61f2d49fe49d8 73 Pfam PF03621 MbtH-like protein 1 53 2.7E-28 T 14-10-2018 IPR005153 MbtH-like domain Amir_3601 89bc9dcc1755e6af73a61f2d49fe49d8 73 SMART SM00923 3 53 6.1E-30 T 14-10-2018 IPR005153 MbtH-like domain Amir_3601 89bc9dcc1755e6af73a61f2d49fe49d8 73 SUPERFAMILY SSF160582 1 69 4.32E-32 T 14-10-2018 IPR038020 MbtH-like domain superfamily Amir_4942 d8b8b18a31e46042f1957ee2a34547fe 335 Gene3D G3DSA:3.40.50.720 59 333 8.0E-54 T 14-10-2018 Amir_4942 d8b8b18a31e46042f1957ee2a34547fe 335 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 86 1.9E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4942 d8b8b18a31e46042f1957ee2a34547fe 335 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 150 1.9E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4942 d8b8b18a31e46042f1957ee2a34547fe 335 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 240 257 1.9E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4942 d8b8b18a31e46042f1957ee2a34547fe 335 SUPERFAMILY SSF51735 65 307 6.92E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4942 d8b8b18a31e46042f1957ee2a34547fe 335 Pfam PF00106 short chain dehydrogenase 69 195 7.7E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_6829 58e1059176ece6c92db66812a104a678 100 SUPERFAMILY SSF49478 24 77 4.71E-8 T 14-10-2018 Amir_6829 58e1059176ece6c92db66812a104a678 100 Pfam PF07210 Protein of unknown function (DUF1416) 6 99 5.8E-40 T 14-10-2018 IPR010814 Protein of unknown function DUF1416 Amir_6829 58e1059176ece6c92db66812a104a678 100 Gene3D G3DSA:2.60.40.1120 24 99 4.2E-5 T 14-10-2018 Amir_1862 5e1d71dae2b4746badff0c003560ee0c 217 SUPERFAMILY SSF53639 6 209 2.16E-59 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Amir_1862 5e1d71dae2b4746badff0c003560ee0c 217 SMART SM01007 9 188 6.5E-60 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal Amir_1862 5e1d71dae2b4746badff0c003560ee0c 217 Gene3D G3DSA:3.40.225.10 2 217 4.0E-65 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Amir_1862 5e1d71dae2b4746badff0c003560ee0c 217 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 11 186 6.8E-46 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal Amir_5154 058a1e2d3cbae336385d350c2ad8b50f 481 Pfam PF01458 Uncharacterized protein family (UPF0051) 227 452 5.1E-76 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 Amir_5154 058a1e2d3cbae336385d350c2ad8b50f 481 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 25 472 1.3E-220 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 Amir_5154 058a1e2d3cbae336385d350c2ad8b50f 481 SUPERFAMILY SSF101960 47 478 1.96E-140 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Amir_4277 ecbc4127f8f74afb275d5db107412a61 385 Gene3D G3DSA:3.20.20.70 15 377 2.1E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_4277 ecbc4127f8f74afb275d5db107412a61 385 SUPERFAMILY SSF51395 14 372 1.15E-97 T 14-10-2018 Amir_4277 ecbc4127f8f74afb275d5db107412a61 385 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 17 252 1.2E-53 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Amir_6721 570bd10f744a1c4b00a3d533ce2ad8aa 147 Pfam PF11292 Protein of unknown function (DUF3093) 7 101 1.7E-5 T 14-10-2018 IPR021443 Protein of unknown function DUF3093 Amir_3411 358466b623caeaaf78d88850a4d712ce 469 Pfam PF11700 Vacuole effluxer Atg22 like 177 460 9.4E-62 T 14-10-2018 IPR024671 Autophagy-related protein 22-like Amir_3411 358466b623caeaaf78d88850a4d712ce 469 Pfam PF11700 Vacuole effluxer Atg22 like 13 175 6.0E-36 T 14-10-2018 IPR024671 Autophagy-related protein 22-like Amir_3411 358466b623caeaaf78d88850a4d712ce 469 SUPERFAMILY SSF103473 18 456 4.05E-34 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_3411 358466b623caeaaf78d88850a4d712ce 469 Gene3D G3DSA:1.20.1250.20 271 459 9.1E-15 T 14-10-2018 Amir_3411 358466b623caeaaf78d88850a4d712ce 469 Gene3D G3DSA:1.20.1250.20 23 248 2.9E-11 T 14-10-2018 Amir_5083 a784545793fd36c179dc9f8984ec38c1 260 Gene3D G3DSA:3.40.50.1820 16 257 4.1E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5083 a784545793fd36c179dc9f8984ec38c1 260 SUPERFAMILY SSF53474 17 257 7.13E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5083 a784545793fd36c179dc9f8984ec38c1 260 Pfam PF00561 alpha/beta hydrolase fold 27 172 3.5E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_5083 a784545793fd36c179dc9f8984ec38c1 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 1.8E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_5083 a784545793fd36c179dc9f8984ec38c1 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 1.8E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_5083 a784545793fd36c179dc9f8984ec38c1 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 1.8E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_5083 a784545793fd36c179dc9f8984ec38c1 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 1.8E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_4881 0ca6b065dd32b8b9f4a49ad1a7438870 216 SUPERFAMILY SSF52540 1 69 7.16E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4881 0ca6b065dd32b8b9f4a49ad1a7438870 216 Gene3D G3DSA:3.40.50.300 1 202 4.9E-8 T 14-10-2018 Amir_3201 115549a86cc5ecb2efa7a92d4d87d93e 154 Pfam PF14325 Domain of unknown function (DUF4383) 13 138 9.8E-45 T 14-10-2018 IPR025492 Protein of unknown function DUF4383 Amir_7035 65a54f11a7a2a0c2296f684695a1ab01 519 PIRSF PIRSF010361 24 505 2.2E-161 T 14-10-2018 IPR016570 Uncharacterised conserved protein UCP010361, membrane Amir_7035 65a54f11a7a2a0c2296f684695a1ab01 519 Pfam PF09594 Glycosyltransferase family 87 173 403 5.7E-13 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 Amir_6348 15dc3411b303816c791143d3432c7461 517 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 396 479 7.9E-11 T 14-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain Amir_6348 15dc3411b303816c791143d3432c7461 517 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 113 287 3.4E-42 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amir_6348 15dc3411b303816c791143d3432c7461 517 Gene3D G3DSA:1.10.260.150 63 377 1.0E-64 T 14-10-2018 Amir_6348 15dc3411b303816c791143d3432c7461 517 Gene3D G3DSA:3.30.70.2390 394 477 1.0E-7 T 14-10-2018 Amir_6348 15dc3411b303816c791143d3432c7461 517 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 113 287 1.2E-34 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amir_3211 e189d8888734711f4f347ac20e00be3a 368 Pfam PF06224 Winged helix DNA-binding domain 36 358 6.7E-44 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 Amir_2839 eddc91b09201039ea46a438fa50f0cc6 517 Pfam PF00561 alpha/beta hydrolase fold 95 255 2.7E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_2839 eddc91b09201039ea46a438fa50f0cc6 517 Pfam PF08386 TAP-like protein 417 505 4.7E-17 T 14-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal Amir_2839 eddc91b09201039ea46a438fa50f0cc6 517 SUPERFAMILY SSF53474 81 492 4.69E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2839 eddc91b09201039ea46a438fa50f0cc6 517 Gene3D G3DSA:3.40.50.1820 336 496 4.6E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0781 97d1c3f52e96cf52e719f543e4818511 192 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 3 178 3.0E-74 T 14-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 Amir_0781 97d1c3f52e96cf52e719f543e4818511 192 Pfam PF03352 Methyladenine glycosylase 7 178 1.9E-66 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 Amir_0781 97d1c3f52e96cf52e719f543e4818511 192 Gene3D G3DSA:1.10.340.30 2 183 1.0E-71 T 14-10-2018 Amir_0781 97d1c3f52e96cf52e719f543e4818511 192 SUPERFAMILY SSF48150 3 181 6.91E-68 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Amir_3473 c1d51bb9125946bdd750e2277fb5e770 289 Gene3D G3DSA:1.10.3720.10 46 287 1.5E-64 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3473 c1d51bb9125946bdd750e2277fb5e770 289 SUPERFAMILY SSF161098 48 276 7.46E-55 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3473 c1d51bb9125946bdd750e2277fb5e770 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 284 4.0E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_4052 d22c2d5783aa03a4b11f47d64da78f68 385 SUPERFAMILY SSF55874 261 379 4.02E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4052 d22c2d5783aa03a4b11f47d64da78f68 385 Pfam PF07730 Histidine kinase 174 237 9.5E-19 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_4052 d22c2d5783aa03a4b11f47d64da78f68 385 Gene3D G3DSA:3.30.565.10 254 380 6.1E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0330 8b4266cf450b0e2933787b3010cccf4d 116 Pfam PF11774 Lsr2 1 114 2.1E-41 T 14-10-2018 IPR024412 Lsr2 Amir_0330 8b4266cf450b0e2933787b3010cccf4d 116 Gene3D G3DSA:3.30.60.230 1 60 2.4E-25 T 14-10-2018 Amir_0330 8b4266cf450b0e2933787b3010cccf4d 116 ProDom PD026347 LSR2-LIKE LSR2 ANTIGEN IMMUNE PRECURSOR RESPONSE SIGNAL PLASMID LYSYL GP61 1 112 6.0E-23 T 14-10-2018 IPR024412 Lsr2 Amir_0330 8b4266cf450b0e2933787b3010cccf4d 116 Gene3D G3DSA:1.20.890.50 82 116 1.8E-16 T 14-10-2018 Amir_4354 3f7af704ca7d5fa59e2038787de01e4c 516 Gene3D G3DSA:3.50.50.60 6 361 1.8E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4354 3f7af704ca7d5fa59e2038787de01e4c 516 SUPERFAMILY SSF51905 3 216 7.25E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4354 3f7af704ca7d5fa59e2038787de01e4c 516 Gene3D G3DSA:3.50.50.60 152 284 1.8E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4354 3f7af704ca7d5fa59e2038787de01e4c 516 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 5.9E-8 T 14-10-2018 Amir_4354 3f7af704ca7d5fa59e2038787de01e4c 516 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 180 198 5.9E-8 T 14-10-2018 Amir_4354 3f7af704ca7d5fa59e2038787de01e4c 516 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 5.9E-8 T 14-10-2018 Amir_4354 3f7af704ca7d5fa59e2038787de01e4c 516 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.8E-5 T 14-10-2018 Amir_4354 3f7af704ca7d5fa59e2038787de01e4c 516 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 1.8E-5 T 14-10-2018 Amir_4354 3f7af704ca7d5fa59e2038787de01e4c 516 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 205 1.8E-5 T 14-10-2018 Amir_4354 3f7af704ca7d5fa59e2038787de01e4c 516 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 6 326 4.2E-48 T 14-10-2018 Amir_4273 e64d290f26db70ffe629b59bb71f3b84 145 SMART SM00347 25 123 4.0E-4 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4273 e64d290f26db70ffe629b59bb71f3b84 145 Pfam PF12802 MarR family 31 86 1.9E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4273 e64d290f26db70ffe629b59bb71f3b84 145 SUPERFAMILY SSF46785 15 135 4.22E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4273 e64d290f26db70ffe629b59bb71f3b84 145 Gene3D G3DSA:1.10.10.10 2 136 6.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4032 f4d58ae40481c1d20132627edf51917a 501 ProSitePatterns PS00455 Putative AMP-binding domain signature. 151 162 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4032 f4d58ae40481c1d20132627edf51917a 501 SUPERFAMILY SSF56801 7 497 9.29E-99 T 14-10-2018 Amir_4032 f4d58ae40481c1d20132627edf51917a 501 Pfam PF00501 AMP-binding enzyme 16 403 5.5E-64 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4032 f4d58ae40481c1d20132627edf51917a 501 Gene3D G3DSA:3.30.300.30 398 500 1.4E-19 T 14-10-2018 Amir_4032 f4d58ae40481c1d20132627edf51917a 501 Pfam PF13193 AMP-binding enzyme C-terminal domain 413 486 4.9E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Amir_4032 f4d58ae40481c1d20132627edf51917a 501 Gene3D G3DSA:3.40.50.12780 3 397 8.2E-69 T 14-10-2018 Amir_6768 9fd456e815918d4943015df0a03047a0 184 SUPERFAMILY SSF55826 38 178 1.7E-23 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Amir_6768 9fd456e815918d4943015df0a03047a0 184 Gene3D G3DSA:3.90.960.10 25 178 2.4E-24 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Amir_6768 9fd456e815918d4943015df0a03047a0 184 Pfam PF04073 Aminoacyl-tRNA editing domain 48 170 1.1E-17 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Amir_5118 6a0b9e7f9ea0d000bd06d688ae81b401 150 Pfam PF00578 AhpC/TSA family 4 125 1.7E-30 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amir_5118 6a0b9e7f9ea0d000bd06d688ae81b401 150 Gene3D G3DSA:3.40.30.10 1 149 1.5E-42 T 14-10-2018 Amir_5118 6a0b9e7f9ea0d000bd06d688ae81b401 150 PIRSF PIRSF000239 1 148 4.1E-17 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amir_5118 6a0b9e7f9ea0d000bd06d688ae81b401 150 SUPERFAMILY SSF52833 2 148 6.41E-41 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Amir_2634 21d9356579235f3cad38482ddfa1005a 73 Gene3D G3DSA:1.10.150.20 18 69 8.9E-6 T 14-10-2018 Amir_0722 3c738886195db8badfddf3cb10456c41 144 SUPERFAMILY SSF141523 40 142 2.49E-22 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Amir_0722 3c738886195db8badfddf3cb10456c41 144 Pfam PF03734 L,D-transpeptidase catalytic domain 39 142 4.1E-13 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Amir_0722 3c738886195db8badfddf3cb10456c41 144 Gene3D G3DSA:2.40.440.10 36 144 8.5E-20 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Amir_5043 840de14b8f84b1011907dc2de7b5dc5a 685 Gene3D G3DSA:3.40.50.300 156 232 2.2E-8 T 14-10-2018 Amir_5043 840de14b8f84b1011907dc2de7b5dc5a 685 Gene3D G3DSA:3.40.50.300 559 628 2.1E-5 T 14-10-2018 Amir_5043 840de14b8f84b1011907dc2de7b5dc5a 685 SUPERFAMILY SSF52540 159 672 1.01E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5043 840de14b8f84b1011907dc2de7b5dc5a 685 Gene3D G3DSA:3.40.50.300 389 533 5.3E-5 T 14-10-2018 Amir_5060 e546f33ecfd48362fd58b37a0de98a4e 402 Pfam PF13378 Enolase C-terminal domain-like 192 377 4.2E-46 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Amir_5060 e546f33ecfd48362fd58b37a0de98a4e 402 SUPERFAMILY SSF54826 14 113 6.59E-32 T 14-10-2018 Amir_5060 e546f33ecfd48362fd58b37a0de98a4e 402 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 207 238 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Amir_5060 e546f33ecfd48362fd58b37a0de98a4e 402 Gene3D G3DSA:3.20.20.120 106 366 2.0E-159 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_5060 e546f33ecfd48362fd58b37a0de98a4e 402 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 86 111 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Amir_5060 e546f33ecfd48362fd58b37a0de98a4e 402 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 17 111 9.0E-33 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Amir_5060 e546f33ecfd48362fd58b37a0de98a4e 402 SUPERFAMILY SSF51604 99 386 1.44E-75 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_5060 e546f33ecfd48362fd58b37a0de98a4e 402 Gene3D G3DSA:3.30.390.10 7 398 2.0E-159 T 14-10-2018 IPR029017 Enolase-like, N-terminal Amir_5060 e546f33ecfd48362fd58b37a0de98a4e 402 SMART SM00922 130 257 2.5E-17 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Amir_1303 1e597697cda557334d498813be88e18e 386 ProSitePatterns PS60001 Nitric oxide synthase (NOS) signature. 81 88 - T 14-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 Amir_1303 1e597697cda557334d498813be88e18e 386 SUPERFAMILY SSF56512 16 378 1.57E-152 T 14-10-2018 IPR036119 Nitric oxide synthase, N-terminal domain superfamily GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 Amir_1303 1e597697cda557334d498813be88e18e 386 Gene3D G3DSA:3.90.1230.10 212 318 1.2E-145 T 14-10-2018 Amir_1303 1e597697cda557334d498813be88e18e 386 Pfam PF02898 Nitric oxide synthase, oxygenase domain 24 375 1.1E-146 T 14-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 Amir_1303 1e597697cda557334d498813be88e18e 386 Gene3D G3DSA:3.90.340.10 25 373 1.2E-145 T 14-10-2018 Amir_1303 1e597697cda557334d498813be88e18e 386 PIRSF PIRSF037219 19 382 7.5E-152 T 14-10-2018 IPR017142 Nitric oxide synthase, oxygenase subunit GO:0004517|GO:0006809|GO:0020037 KEGG: 00220+1.14.14.47|KEGG: 00330+1.14.14.47 Amir_1303 1e597697cda557334d498813be88e18e 386 Gene3D G3DSA:3.90.440.10 98 211 1.2E-145 T 14-10-2018 Amir_0490 5dd83477e1082b900ed01f34f1968364 461 Pfam PF05977 Transmembrane secretion effector 28 423 5.5E-56 T 14-10-2018 IPR010290 Transmembrane secretion effector Amir_0490 5dd83477e1082b900ed01f34f1968364 461 Gene3D G3DSA:1.20.1250.20 33 422 4.8E-50 T 14-10-2018 Amir_0490 5dd83477e1082b900ed01f34f1968364 461 SUPERFAMILY SSF103473 36 430 3.14E-53 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_1269 43b9ecf5892c14044523321ee26c1fcb 485 Pfam PF00916 Sulfate permease family 27 382 1.6E-56 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Amir_3522 e2b72f03e3d90f808ff961dba309c84e 274 Pfam PF02673 Bacitracin resistance protein BacA 6 261 3.7E-82 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Amir_3522 e2b72f03e3d90f808ff961dba309c84e 274 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 266 18.146 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Amir_3522 e2b72f03e3d90f808ff961dba309c84e 274 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 259 3.3E-84 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Amir_1483 00fedd2247f17ce073df5b0c28014f2f 636 Pfam PF05729 NACHT domain 114 282 9.8E-10 T 14-10-2018 IPR007111 NACHT nucleoside triphosphatase Amir_1483 00fedd2247f17ce073df5b0c28014f2f 636 SUPERFAMILY SSF52540 103 282 9.82E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1384 c3cbd69c3f86457a6b2a4c3e6efe5e59 126 SUPERFAMILY SSF55961 5 91 1.04E-7 T 14-10-2018 Amir_4435 a8420f6f0e06ea701853ff5685184b6d 62 Gene3D G3DSA:3.30.428.10 1 62 1.1E-6 T 14-10-2018 IPR036265 HIT-like superfamily Amir_4435 a8420f6f0e06ea701853ff5685184b6d 62 SUPERFAMILY SSF54197 3 56 4.08E-7 T 14-10-2018 IPR036265 HIT-like superfamily Amir_3566 0b08db9c8128f950954cd16df722532c 319 Gene3D G3DSA:3.20.20.100 1 315 1.5E-106 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3566 0b08db9c8128f950954cd16df722532c 319 Pfam PF00248 Aldo/keto reductase family 16 301 6.2E-71 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_3566 0b08db9c8128f950954cd16df722532c 319 SUPERFAMILY SSF51430 1 303 2.62E-93 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_4874 7b90c5660915caf70ad9b92b2599b652 140 Gene3D G3DSA:3.40.630.30 4 132 5.2E-25 T 14-10-2018 Amir_4874 7b90c5660915caf70ad9b92b2599b652 140 Pfam PF00583 Acetyltransferase (GNAT) family 24 121 2.6E-15 T 14-10-2018 IPR000182 GNAT domain Amir_4874 7b90c5660915caf70ad9b92b2599b652 140 SUPERFAMILY SSF55729 8 133 1.11E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_4257 b0ad5d7f95ea58bf5af2794864892546 429 Gene3D G3DSA:3.40.50.20 54 147 1.1E-15 T 14-10-2018 Amir_4257 b0ad5d7f95ea58bf5af2794864892546 429 SUPERFAMILY SSF56059 137 326 1.77E-16 T 14-10-2018 Amir_4257 b0ad5d7f95ea58bf5af2794864892546 429 Gene3D G3DSA:3.30.470.20 242 316 1.1E-15 T 14-10-2018 Amir_4257 b0ad5d7f95ea58bf5af2794864892546 429 Gene3D G3DSA:3.30.1490.20 148 241 1.1E-15 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amir_4257 b0ad5d7f95ea58bf5af2794864892546 429 SUPERFAMILY SSF51735 11 124 4.62E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_6590 5096a2b21c3a76b31f88f5ae0956faf9 158 Pfam PF08044 Domain of unknown function (DUF1707) 10 62 6.7E-20 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 Amir_0042 a7cfad7f87e2155d830f91bcd6b42f9d 249 Gene3D G3DSA:2.60.40.2230 32 196 3.6E-45 T 14-10-2018 IPR038507 YcnI-like superfamily Amir_0042 a7cfad7f87e2155d830f91bcd6b42f9d 249 Pfam PF07987 Domain of unkown function (DUF1775) 35 182 2.9E-46 T 14-10-2018 IPR012533 YcnI-like Amir_1514 4c793163e048115838eb7b05e408e715 174 Pfam PF11292 Protein of unknown function (DUF3093) 7 146 2.9E-51 T 14-10-2018 IPR021443 Protein of unknown function DUF3093 Amir_0804 a7b7ebb4a4546707d28b238d95ce83e5 106 Gene3D G3DSA:2.30.110.10 7 103 4.3E-6 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_0804 a7b7ebb4a4546707d28b238d95ce83e5 106 SUPERFAMILY SSF50475 5 99 5.04E-5 T 14-10-2018 Amir_1279 05acd4a84cc30ef954b0b0834be717d7 215 Gene3D G3DSA:3.40.50.620 36 150 1.7E-12 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amir_1279 05acd4a84cc30ef954b0b0834be717d7 215 Pfam PF02698 DUF218 domain 40 140 1.7E-16 T 14-10-2018 IPR003848 Domain of unknown function DUF218 Amir_0393 aadb41c8008122d4a4b9cb1d07d85a42 284 SUPERFAMILY SSF56529 62 282 3.01E-74 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Amir_0393 aadb41c8008122d4a4b9cb1d07d85a42 284 Gene3D G3DSA:3.90.850.10 69 284 1.1E-79 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Amir_0393 aadb41c8008122d4a4b9cb1d07d85a42 284 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 74 281 1.4E-66 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Amir_0963 f467db2ccd43f70d769cf5efc45908b2 326 Pfam PF13359 DDE superfamily endonuclease 102 183 1.6E-13 T 14-10-2018 IPR027806 Harbinger transposase-derived nuclease domain Amir_0963 f467db2ccd43f70d769cf5efc45908b2 326 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 34 81 2.1E-11 T 14-10-2018 IPR027805 Transposase, Helix-turn-helix domain Amir_6636 478c24771e0879077592c97ea972ae17 127 SUPERFAMILY SSF48300 5 62 2.49E-13 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6636 478c24771e0879077592c97ea972ae17 127 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 127 5.0E-46 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6636 478c24771e0879077592c97ea972ae17 127 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 6 51 2.1E-18 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6636 478c24771e0879077592c97ea972ae17 127 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 127 23.222 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6636 478c24771e0879077592c97ea972ae17 127 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 60 127 1.2E-26 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6636 478c24771e0879077592c97ea972ae17 127 Gene3D G3DSA:3.30.1390.10 57 127 1.2E-26 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Amir_6636 478c24771e0879077592c97ea972ae17 127 Gene3D G3DSA:1.20.5.710 4 56 1.5E-18 T 14-10-2018 Amir_6636 478c24771e0879077592c97ea972ae17 127 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 62 103 2.0E-13 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amir_6636 478c24771e0879077592c97ea972ae17 127 SUPERFAMILY SSF54736 56 127 1.13E-20 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Amir_5785 0e58f368e1f0ad756822940538581cb6 363 Pfam PF04909 Amidohydrolase 201 362 5.2E-6 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amir_5785 0e58f368e1f0ad756822940538581cb6 363 Gene3D G3DSA:3.20.20.140 5 363 5.9E-87 T 14-10-2018 Amir_5785 0e58f368e1f0ad756822940538581cb6 363 SUPERFAMILY SSF51556 6 362 8.17E-12 T 14-10-2018 IPR032466 Metal-dependent hydrolase Amir_2328 6d8047488abe3c86ef89c71eb0927cfd 363 Gene3D G3DSA:3.40.1690.10 214 354 2.7E-55 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Amir_2328 6d8047488abe3c86ef89c71eb0927cfd 363 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 205 223 3.1E-34 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Amir_2328 6d8047488abe3c86ef89c71eb0927cfd 363 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 225 242 3.1E-34 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Amir_2328 6d8047488abe3c86ef89c71eb0927cfd 363 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 3.1E-34 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Amir_2328 6d8047488abe3c86ef89c71eb0927cfd 363 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 269 284 3.1E-34 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Amir_2328 6d8047488abe3c86ef89c71eb0927cfd 363 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 298 319 3.1E-34 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Amir_2328 6d8047488abe3c86ef89c71eb0927cfd 363 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 342 2.4E-108 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Amir_2328 6d8047488abe3c86ef89c71eb0927cfd 363 SUPERFAMILY SSF160544 241 347 5.36E-38 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Amir_1245 2871775f13f3f91c1f5346dc68bd16ce 414 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 217 403 5.7E-25 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_1245 2871775f13f3f91c1f5346dc68bd16ce 414 SUPERFAMILY SSF52266 214 413 3.66E-43 T 14-10-2018 Amir_1245 2871775f13f3f91c1f5346dc68bd16ce 414 Gene3D G3DSA:3.40.50.1110 200 413 1.5E-29 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_1836 6d41494b98f7d949d852367a2b68485f 77 Pfam PF16827 zinc-finger 2 61 2.3E-17 T 14-10-2018 IPR031795 Putative zinc-finger containing protein Amir_5825 41878c3531fef9368451122716e29d60 153 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 148 16.245 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Amir_5825 41878c3531fef9368451122716e29d60 153 Gene3D G3DSA:3.90.1140.10 1 152 4.7E-27 T 14-10-2018 Amir_5825 41878c3531fef9368451122716e29d60 153 Pfam PF02834 LigT like Phosphoesterase 8 75 3.9E-7 T 14-10-2018 IPR014051 Phosphoesterase, HXTX Amir_5825 41878c3531fef9368451122716e29d60 153 SUPERFAMILY SSF55144 2 148 1.34E-24 T 14-10-2018 IPR009097 Cyclic phosphodiesterase Amir_6070 6b4c43af075e41315078cbe6b9f79619 370 SUPERFAMILY SSF48452 177 354 1.41E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6070 6b4c43af075e41315078cbe6b9f79619 370 Gene3D G3DSA:1.25.40.10 267 370 2.5E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6070 6b4c43af075e41315078cbe6b9f79619 370 Gene3D G3DSA:1.25.40.10 159 266 3.0E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_6328 acaf6020bde06028f7be99f0b42148e3 116 Pfam PF12005 Protein of unknown function (DUF3499) 1 112 3.9E-47 T 14-10-2018 IPR021888 Protein of unknown function DUF3499 Amir_5210 925f3c1eb0057b1dcd6c6bb9fc013a9c 530 Gene3D G3DSA:1.10.260.40 74 145 5.7E-8 T 14-10-2018 Amir_5210 925f3c1eb0057b1dcd6c6bb9fc013a9c 530 Pfam PF13560 Helix-turn-helix domain 79 140 9.2E-9 T 14-10-2018 Amir_5210 925f3c1eb0057b1dcd6c6bb9fc013a9c 530 SUPERFAMILY SSF47413 92 145 3.33E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_0401 11dc550919d483d2467117875323f455 273 SUPERFAMILY SSF161098 4 273 8.69E-77 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0401 11dc550919d483d2467117875323f455 273 Gene3D G3DSA:1.10.3720.10 2 264 1.2E-68 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0401 11dc550919d483d2467117875323f455 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 260 8.8E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_5094 8d2c1986f42e1f59638dcd090da24eae 304 SUPERFAMILY SSF53067 131 291 1.46E-21 T 14-10-2018 Amir_5094 8d2c1986f42e1f59638dcd090da24eae 304 Gene3D G3DSA:3.30.420.150 110 281 1.8E-53 T 14-10-2018 Amir_5094 8d2c1986f42e1f59638dcd090da24eae 304 SUPERFAMILY SSF53067 8 127 2.07E-23 T 14-10-2018 Amir_5094 8d2c1986f42e1f59638dcd090da24eae 304 Pfam PF02541 Ppx/GppA phosphatase family 24 290 3.3E-45 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Amir_5094 8d2c1986f42e1f59638dcd090da24eae 304 Gene3D G3DSA:3.30.420.40 9 288 1.8E-53 T 14-10-2018 Amir_0188 93e78fed2904aec6f9b9ed189c1877e7 157 SUPERFAMILY SSF102405 2 154 1.1E-13 T 14-10-2018 Amir_0188 93e78fed2904aec6f9b9ed189c1877e7 157 Gene3D G3DSA:3.40.50.450 11 149 3.4E-6 T 14-10-2018 Amir_2092 36a3e1df3868a60c7c187dfc11fc5edb 215 Gene3D G3DSA:1.20.120.1760 7 202 2.5E-56 T 14-10-2018 Amir_2092 36a3e1df3868a60c7c187dfc11fc5edb 215 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 91 2.7E-10 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amir_2092 36a3e1df3868a60c7c187dfc11fc5edb 215 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 69 91 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amir_1759 67932ffa0b25ac5ab2a74acf5379212d 153 SUPERFAMILY SSF54637 10 147 1.13E-29 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_1759 67932ffa0b25ac5ab2a74acf5379212d 153 Gene3D G3DSA:3.10.129.10 5 151 5.1E-32 T 14-10-2018 Amir_1759 67932ffa0b25ac5ab2a74acf5379212d 153 Pfam PF03061 Thioesterase superfamily 55 133 4.1E-8 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Amir_3222 48f6c6b3eeda8f5c2e15d5dcca3c7c16 673 Pfam PF00553 Cellulose binding domain 577 665 6.8E-25 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_3222 48f6c6b3eeda8f5c2e15d5dcca3c7c16 673 SUPERFAMILY SSF49384 571 668 1.46E-27 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Amir_3222 48f6c6b3eeda8f5c2e15d5dcca3c7c16 673 Pfam PF08757 CotH kinase protein 201 558 2.0E-67 T 14-10-2018 IPR014867 Spore coat protein CotH Amir_3222 48f6c6b3eeda8f5c2e15d5dcca3c7c16 673 Gene3D G3DSA:2.60.40.290 575 672 3.5E-27 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Amir_3222 48f6c6b3eeda8f5c2e15d5dcca3c7c16 673 SMART SM00637 577 670 2.6E-36 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Amir_3222 48f6c6b3eeda8f5c2e15d5dcca3c7c16 673 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 73 137 3.6E-12 T 14-10-2018 Amir_6336 dc01295c023f10ede83cc28a87bd53a7 314 Gene3D G3DSA:1.10.1670.40 105 292 6.0E-16 T 14-10-2018 Amir_6336 dc01295c023f10ede83cc28a87bd53a7 314 Gene3D G3DSA:1.10.340.30 125 245 6.0E-16 T 14-10-2018 Amir_6336 dc01295c023f10ede83cc28a87bd53a7 314 SUPERFAMILY SSF48150 116 295 4.71E-24 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Amir_5451 32df70c6f3a92f497a0ecbbf47213597 164 SUPERFAMILY SSF55252 86 150 1.23E-18 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 Amir_5451 32df70c6f3a92f497a0ecbbf47213597 164 SUPERFAMILY SSF46785 3 69 4.16E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5451 32df70c6f3a92f497a0ecbbf47213597 164 Pfam PF01316 Arginine repressor, DNA binding domain 1 70 9.4E-24 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 Amir_5451 32df70c6f3a92f497a0ecbbf47213597 164 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 154 7.1E-48 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Amir_5451 32df70c6f3a92f497a0ecbbf47213597 164 Pfam PF02863 Arginine repressor, C-terminal domain 86 151 1.2E-25 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Amir_5451 32df70c6f3a92f497a0ecbbf47213597 164 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 94 148 1.0E-17 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Amir_5451 32df70c6f3a92f497a0ecbbf47213597 164 Hamap MF_00173 Arginine repressor [argR]. 1 158 63.366 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Amir_5451 32df70c6f3a92f497a0ecbbf47213597 164 Gene3D G3DSA:1.10.10.10 1 74 1.9E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5451 32df70c6f3a92f497a0ecbbf47213597 164 PRINTS PR01467 Bacterial arginine repressor signature 37 52 1.3E-27 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Amir_5451 32df70c6f3a92f497a0ecbbf47213597 164 PRINTS PR01467 Bacterial arginine repressor signature 124 139 1.3E-27 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Amir_5451 32df70c6f3a92f497a0ecbbf47213597 164 PRINTS PR01467 Bacterial arginine repressor signature 94 107 1.3E-27 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Amir_5451 32df70c6f3a92f497a0ecbbf47213597 164 PRINTS PR01467 Bacterial arginine repressor signature 21 34 1.3E-27 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Amir_5451 32df70c6f3a92f497a0ecbbf47213597 164 Gene3D G3DSA:3.30.1360.40 77 155 1.3E-30 T 14-10-2018 Amir_2611 66ef4c064e7246535e6316e3e4e864a4 279 Pfam PF13460 NAD(P)H-binding 6 177 1.3E-20 T 14-10-2018 IPR016040 NAD(P)-binding domain Amir_2611 66ef4c064e7246535e6316e3e4e864a4 279 SUPERFAMILY SSF51735 2 250 4.21E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_2611 66ef4c064e7246535e6316e3e4e864a4 279 Gene3D G3DSA:3.40.50.720 3 261 3.8E-78 T 14-10-2018 Amir_2611 66ef4c064e7246535e6316e3e4e864a4 279 Gene3D G3DSA:3.90.25.10 131 262 3.8E-78 T 14-10-2018 Amir_4805 0ef808adb38563f9e4fb78ae11b82304 168 Gene3D G3DSA:1.20.1250.20 44 168 5.0E-13 T 14-10-2018 Amir_4805 0ef808adb38563f9e4fb78ae11b82304 168 SUPERFAMILY SSF103473 44 152 5.62E-11 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4805 0ef808adb38563f9e4fb78ae11b82304 168 Pfam PF07690 Major Facilitator Superfamily 51 150 2.0E-8 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_0596 5611a2be7e40f5bea1fc5c0781875398 295 SMART SM00155 82 108 0.0092 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Amir_0596 5611a2be7e40f5bea1fc5c0781875398 295 Gene3D G3DSA:3.30.870.10 9 149 3.9E-6 T 14-10-2018 Amir_0596 5611a2be7e40f5bea1fc5c0781875398 295 SUPERFAMILY SSF56024 81 117 7.53E-5 T 14-10-2018 Amir_5361 33738c42715ee7c0c63e73833751b468 265 SUPERFAMILY SSF55874 34 130 6.48E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5361 33738c42715ee7c0c63e73833751b468 265 Gene3D G3DSA:3.30.750.24 145 251 4.7E-8 T 14-10-2018 IPR036513 STAS domain superfamily Amir_5361 33738c42715ee7c0c63e73833751b468 265 Gene3D G3DSA:3.30.565.10 6 135 3.8E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5361 33738c42715ee7c0c63e73833751b468 265 Pfam PF13581 Histidine kinase-like ATPase domain 14 129 7.4E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_0575 a774714178cc7016e438451e0a3a8f56 157 ProSitePatterns PS00893 Nudix box signature. 49 70 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amir_0575 a774714178cc7016e438451e0a3a8f56 157 Pfam PF00293 NUDIX domain 20 134 1.9E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amir_0575 a774714178cc7016e438451e0a3a8f56 157 SUPERFAMILY SSF55811 8 147 5.96E-34 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_0575 a774714178cc7016e438451e0a3a8f56 157 Gene3D G3DSA:3.90.79.10 7 152 4.3E-34 T 14-10-2018 Amir_0575 a774714178cc7016e438451e0a3a8f56 157 ProDom PD037294 PEPTIDE ACMNPV ORF38 ORF ORF_59 ORF61 ORF7 PXORF52 ORF-30 ORF79 45 85 0.002 T 14-10-2018 Amir_4008 322793a737cab41f4b26cb0516aaff4a 380 Gene3D G3DSA:3.20.20.500 8 374 1.1E-161 T 14-10-2018 Amir_4008 322793a737cab41f4b26cb0516aaff4a 380 SUPERFAMILY SSF51569 54 326 1.03E-14 T 14-10-2018 Amir_4008 322793a737cab41f4b26cb0516aaff4a 380 Pfam PF06187 Protein of unknown function (DUF993) 16 378 8.1E-169 T 14-10-2018 IPR009334 Protein of unknown function DUF993 Amir_3649 bda47c2ca43387e9a114c8dae2d9e740 75 Pfam PF04149 Domain of unknown function (DUF397) 13 64 1.4E-21 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_2020 2d73d72694e35d23af40f81f69b137e4 560 SUPERFAMILY SSF53098 255 319 7.59E-5 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Amir_2020 2d73d72694e35d23af40f81f69b137e4 560 Pfam PF09299 Mu transposase, C-terminal 483 547 4.1E-7 T 14-10-2018 IPR015378 Transposase-like, Mu, C-terminal Amir_6078 9ee2702a0da1c8e5e0cc96b82d07c550 482 Pfam PF04228 Putative neutral zinc metallopeptidase 69 266 1.7E-8 T 14-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative Amir_6078 9ee2702a0da1c8e5e0cc96b82d07c550 482 SUPERFAMILY SSF55486 65 209 4.89E-10 T 14-10-2018 Amir_2959 a553ae0f81eb21561f4b7cbe3dce1d9a 374 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 15 361 7.7E-63 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Amir_2959 a553ae0f81eb21561f4b7cbe3dce1d9a 374 SUPERFAMILY SSF51395 9 364 9.3E-94 T 14-10-2018 Amir_2959 a553ae0f81eb21561f4b7cbe3dce1d9a 374 Gene3D G3DSA:3.20.20.70 11 370 3.1E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_3191 52087f3e4e80c94d8376d77cfcde9811 378 Pfam PF01757 Acyltransferase family 12 342 4.6E-25 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Amir_5524 f52beccf92fa3a9609e03f80c0e3fee1 308 SUPERFAMILY SSF55729 135 297 2.34E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_5524 f52beccf92fa3a9609e03f80c0e3fee1 308 Pfam PF00583 Acetyltransferase (GNAT) family 193 282 3.7E-6 T 14-10-2018 IPR000182 GNAT domain Amir_5524 f52beccf92fa3a9609e03f80c0e3fee1 308 Gene3D G3DSA:3.40.630.30 140 301 2.7E-19 T 14-10-2018 Amir_6842 1c4390902acb93eb907cb1dfc7c32b87 60 Pfam PF11273 Protein of unknown function (DUF3073) 2 59 2.3E-23 T 14-10-2018 IPR021426 Protein of unknown function DUF3073 Amir_5867 87972ccb537719e5e86c5eb5c5967836 204 Pfam PF01810 LysE type translocator 17 203 5.2E-29 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Amir_5867 87972ccb537719e5e86c5eb5c5967836 204 PIRSF PIRSF006324 2 204 1.2E-50 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Amir_0354 ebce39b675e18eac6e0be4cc7999b859 278 Pfam PF00950 ABC 3 transport family 18 269 1.8E-45 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Amir_0354 ebce39b675e18eac6e0be4cc7999b859 278 SUPERFAMILY SSF81345 10 266 2.09E-32 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_3472 4307b74ee059b690022fcc2b19df4fda 413 Gene3D G3DSA:3.40.190.10 137 398 1.6E-54 T 14-10-2018 Amir_3472 4307b74ee059b690022fcc2b19df4fda 413 SUPERFAMILY SSF53850 20 398 6.21E-48 T 14-10-2018 Amir_3472 4307b74ee059b690022fcc2b19df4fda 413 Gene3D G3DSA:3.40.190.10 50 349 1.6E-54 T 14-10-2018 Amir_3472 4307b74ee059b690022fcc2b19df4fda 413 Pfam PF01547 Bacterial extracellular solute-binding protein 48 331 9.5E-26 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_4595 8464df031cc75417c941d9187b024de4 344 Pfam PF10503 Esterase PHB depolymerase 72 204 2.8E-12 T 14-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 Amir_4595 8464df031cc75417c941d9187b024de4 344 Gene3D G3DSA:3.40.50.1820 48 321 1.7E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4595 8464df031cc75417c941d9187b024de4 344 SUPERFAMILY SSF53474 84 312 2.32E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4978 8b7ba65cceeb78691927128d6f66c45c 389 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 273 356 4.4E-9 T 14-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 Amir_4978 8b7ba65cceeb78691927128d6f66c45c 389 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 222 373 3.0E-36 T 14-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 Amir_4978 8b7ba65cceeb78691927128d6f66c45c 389 Gene3D G3DSA:3.40.50.2000 3 381 5.1E-108 T 14-10-2018 Amir_4978 8b7ba65cceeb78691927128d6f66c45c 389 SUPERFAMILY SSF53756 3 387 1.39E-70 T 14-10-2018 Amir_4978 8b7ba65cceeb78691927128d6f66c45c 389 Gene3D G3DSA:3.40.50.2000 208 372 5.1E-108 T 14-10-2018 Amir_2938 bd8437aa5c5f63bc511d55fe87d5eca7 509 Gene3D G3DSA:3.40.50.11780 222 354 2.4E-10 T 14-10-2018 Amir_2938 bd8437aa5c5f63bc511d55fe87d5eca7 509 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 232 390 4.5E-32 T 14-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain Amir_2938 bd8437aa5c5f63bc511d55fe87d5eca7 509 Pfam PF17482 Phage tail sheath C-terminal domain 392 498 7.6E-22 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain Amir_5095 c3d07ffd8a8cc209c921c91438ea4730 128 Gene3D G3DSA:3.30.750.24 3 113 4.2E-30 T 14-10-2018 IPR036513 STAS domain superfamily Amir_5095 c3d07ffd8a8cc209c921c91438ea4730 128 Pfam PF13466 STAS domain 17 96 5.8E-15 T 14-10-2018 IPR002645 STAS domain Amir_5095 c3d07ffd8a8cc209c921c91438ea4730 128 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 9 105 2.4E-19 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Amir_5095 c3d07ffd8a8cc209c921c91438ea4730 128 SUPERFAMILY SSF52091 9 109 1.29E-22 T 14-10-2018 IPR036513 STAS domain superfamily Amir_1223 c2918fbe72a045ba5f7e0eb07248d45e 490 PIRSF PIRSF006060 25 487 1.0E-84 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amir_1223 c2918fbe72a045ba5f7e0eb07248d45e 490 Pfam PF13520 Amino acid permease 36 447 1.7E-57 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amir_1223 c2918fbe72a045ba5f7e0eb07248d45e 490 Gene3D G3DSA:1.20.1740.10 32 482 1.3E-118 T 14-10-2018 Amir_3795 1bc601668b84950d177d07d4e78e53fd 228 SUPERFAMILY SSF55811 24 153 5.51E-17 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_3795 1bc601668b84950d177d07d4e78e53fd 228 Gene3D G3DSA:3.90.79.10 19 150 9.4E-22 T 14-10-2018 Amir_3336 3e095af28f9b22a1b9fe0143b2824aad 537 SUPERFAMILY SSF53850 93 533 3.44E-50 T 14-10-2018 Amir_3336 3e095af28f9b22a1b9fe0143b2824aad 537 Pfam PF13416 Bacterial extracellular solute-binding protein 107 365 1.0E-13 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_3336 3e095af28f9b22a1b9fe0143b2824aad 537 Gene3D G3DSA:3.40.190.10 83 408 3.7E-32 T 14-10-2018 Amir_0752 7695b8bb5fb52b5e8ce202adda6bce99 400 Pfam PF03888 MucB/RseB N-terminal domain 95 227 3.1E-5 T 14-10-2018 IPR033434 MucB/RseB, N-terminal Amir_0752 7695b8bb5fb52b5e8ce202adda6bce99 400 SUPERFAMILY SSF89392 88 245 1.96E-12 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Amir_0752 7695b8bb5fb52b5e8ce202adda6bce99 400 Gene3D G3DSA:2.50.20.10 74 245 1.5E-20 T 14-10-2018 Amir_0900 72cc1516e481e5a977e15d395fda76dd 292 Pfam PF04055 Radical SAM superfamily 10 144 2.0E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amir_0900 72cc1516e481e5a977e15d395fda76dd 292 Pfam PF13186 Iron-sulfur cluster-binding domain 197 261 8.2E-6 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Amir_0900 72cc1516e481e5a977e15d395fda76dd 292 SUPERFAMILY SSF102114 5 236 1.28E-33 T 14-10-2018 Amir_0900 72cc1516e481e5a977e15d395fda76dd 292 Gene3D G3DSA:3.20.20.70 2 235 6.9E-32 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_6824 c7c73b534fb11f6d4e9e4e547be9f4dc 283 SUPERFAMILY SSF53474 35 276 3.0E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6824 c7c73b534fb11f6d4e9e4e547be9f4dc 283 Pfam PF12146 Serine aminopeptidase, S33 59 188 2.6E-13 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Amir_6824 c7c73b534fb11f6d4e9e4e547be9f4dc 283 Gene3D G3DSA:3.40.50.1820 36 278 5.0E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3326 3bbc5412742b9c4bb5beee58b5dd5a71 307 Pfam PF12833 Helix-turn-helix domain 149 227 5.3E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_3326 3bbc5412742b9c4bb5beee58b5dd5a71 307 Gene3D G3DSA:1.10.10.60 133 229 1.3E-20 T 14-10-2018 Amir_3326 3bbc5412742b9c4bb5beee58b5dd5a71 307 SUPERFAMILY SSF46689 179 228 2.11E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_3326 3bbc5412742b9c4bb5beee58b5dd5a71 307 SMART SM00342 143 225 3.6E-11 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amir_6312 5d0186c506815467b5f9f52547eb5c58 74 Pfam PF04149 Domain of unknown function (DUF397) 9 66 1.2E-17 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_3367 2eea2ada90cad747238506f6c76ee209 176 SUPERFAMILY SSF109854 10 169 3.05E-31 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_3367 2eea2ada90cad747238506f6c76ee209 176 Pfam PF04978 Protein of unknown function (DUF664) 15 169 1.6E-20 T 14-10-2018 IPR007061 Protein of unknown function DUF664 Amir_3367 2eea2ada90cad747238506f6c76ee209 176 Gene3D G3DSA:1.20.120.450 5 172 2.7E-63 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_1022 dacecb0a4a727a7095d7351b1d83bbe4 327 Gene3D G3DSA:3.80.10.10 73 306 3.0E-8 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily Amir_1022 dacecb0a4a727a7095d7351b1d83bbe4 327 SUPERFAMILY SSF52047 79 216 1.57E-6 T 14-10-2018 Amir_3588 d2af1b7d992a416ffb2f8e571ce2cad7 173 Pfam PF13671 AAA domain 4 124 3.3E-8 T 14-10-2018 Amir_3588 d2af1b7d992a416ffb2f8e571ce2cad7 173 Gene3D G3DSA:3.40.50.300 1 173 8.1E-28 T 14-10-2018 Amir_3588 d2af1b7d992a416ffb2f8e571ce2cad7 173 SUPERFAMILY SSF52540 2 172 1.82E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1028 46cc8f2a58ae531cde03fd94fd83084e 322 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 215 301 1.0E-21 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Amir_1028 46cc8f2a58ae531cde03fd94fd83084e 322 SUPERFAMILY SSF90002 216 301 1.19E-16 T 14-10-2018 Amir_1028 46cc8f2a58ae531cde03fd94fd83084e 322 SMART SM00833 213 302 6.4E-22 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Amir_1028 46cc8f2a58ae531cde03fd94fd83084e 322 Gene3D G3DSA:3.30.1220.10 194 303 1.9E-9 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily Amir_1028 46cc8f2a58ae531cde03fd94fd83084e 322 Gene3D G3DSA:3.40.50.300 1 183 7.4E-45 T 14-10-2018 Amir_1028 46cc8f2a58ae531cde03fd94fd83084e 322 SUPERFAMILY SSF52540 2 191 7.39E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1028 46cc8f2a58ae531cde03fd94fd83084e 322 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 160 3.8E-35 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Amir_1348 b4621d6a5b680403f60ce1b1f4bfa9a2 207 Gene3D G3DSA:1.20.144.10 110 203 2.1E-13 T 14-10-2018 Amir_1348 b4621d6a5b680403f60ce1b1f4bfa9a2 207 SMART SM00014 90 194 0.0093 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Amir_1348 b4621d6a5b680403f60ce1b1f4bfa9a2 207 SUPERFAMILY SSF48317 16 202 2.49E-17 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Amir_1348 b4621d6a5b680403f60ce1b1f4bfa9a2 207 Pfam PF01569 PAP2 superfamily 117 195 5.7E-10 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Amir_0221 d10a60d5a116b68a153c63cb003c3fc6 392 SUPERFAMILY SSF103473 10 382 7.85E-34 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_0221 d10a60d5a116b68a153c63cb003c3fc6 392 Gene3D G3DSA:1.20.1250.20 3 382 1.4E-29 T 14-10-2018 Amir_0221 d10a60d5a116b68a153c63cb003c3fc6 392 Pfam PF07690 Major Facilitator Superfamily 19 212 4.3E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_3599 da249b436f5c53a22c1d5d5a81cfb80d 250 Gene3D G3DSA:3.30.530.20 2 146 2.8E-16 T 14-10-2018 IPR023393 START-like domain superfamily Amir_3599 da249b436f5c53a22c1d5d5a81cfb80d 250 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 15 128 2.6E-5 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like Amir_3599 da249b436f5c53a22c1d5d5a81cfb80d 250 SUPERFAMILY SSF55961 6 116 3.26E-18 T 14-10-2018 Amir_2503 240587fca0abf2ae455219d57c3edeab 122 Gene3D G3DSA:3.30.70.1060 1 118 1.6E-35 T 14-10-2018 Amir_2503 240587fca0abf2ae455219d57c3edeab 122 Pfam PF03795 YCII-related domain 2 107 1.3E-16 T 14-10-2018 IPR005545 YCII-related Amir_2503 240587fca0abf2ae455219d57c3edeab 122 SUPERFAMILY SSF54909 2 116 1.1E-26 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_2002 a7a3bb8dd2bf879a862b890e297bb514 368 Gene3D G3DSA:3.90.550.10 1 273 4.4E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_2002 a7a3bb8dd2bf879a862b890e297bb514 368 Gene3D G3DSA:2.160.10.10 297 354 9.2E-6 T 14-10-2018 Amir_2002 a7a3bb8dd2bf879a862b890e297bb514 368 Pfam PF00483 Nucleotidyl transferase 7 265 9.4E-34 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Amir_2002 a7a3bb8dd2bf879a862b890e297bb514 368 SUPERFAMILY SSF53448 5 339 1.4E-52 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_0241 d9b80889f3a4c5ef11ac05ea50b1c263 152 SUPERFAMILY SSF55298 2 150 1.73E-55 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_0241 d9b80889f3a4c5ef11ac05ea50b1c263 152 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 6 150 9.1E-33 T 14-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like Amir_0241 d9b80889f3a4c5ef11ac05ea50b1c263 152 Gene3D G3DSA:3.30.1330.40 1 151 6.4E-60 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amir_1395 7c16e6c908bb1c6883ef833292df5dc1 462 Pfam PF01474 Class-II DAHP synthetase family 32 457 2.0E-189 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Amir_1395 7c16e6c908bb1c6883ef833292df5dc1 462 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 27 461 1.3E-215 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Amir_1395 7c16e6c908bb1c6883ef833292df5dc1 462 Gene3D G3DSA:3.20.20.70 224 462 1.4E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_1395 7c16e6c908bb1c6883ef833292df5dc1 462 Gene3D G3DSA:3.20.20.70 57 223 3.7E-53 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_1395 7c16e6c908bb1c6883ef833292df5dc1 462 SUPERFAMILY SSF51569 5 461 2.42E-193 T 14-10-2018 Amir_4918 67c5733afdcd1e3ec4d601ac454725ae 257 SUPERFAMILY SSF110399 34 240 1.15E-24 T 14-10-2018 Amir_4918 67c5733afdcd1e3ec4d601ac454725ae 257 Gene3D G3DSA:3.20.20.70 18 254 1.9E-39 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_4918 67c5733afdcd1e3ec4d601ac454725ae 257 Pfam PF05690 Thiazole biosynthesis protein ThiG 67 233 2.7E-21 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Amir_3801 c8584d336cab91149382835819f6ff27 330 SUPERFAMILY SSF48576 3 284 1.09E-22 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_3801 c8584d336cab91149382835819f6ff27 330 Gene3D G3DSA:1.10.600.10 1 330 1.3E-60 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amir_3702 02f11648a8bded77ed868bb27dee0414 507 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 437 2.1E-146 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane Amir_0361 278a0fd0001b3ce2aae2b284ef1c9422 203 Gene3D G3DSA:3.40.50.1000 1 198 1.9E-25 T 14-10-2018 IPR023214 HAD superfamily Amir_0361 278a0fd0001b3ce2aae2b284ef1c9422 203 SUPERFAMILY SSF56784 3 191 3.57E-28 T 14-10-2018 IPR036412 HAD-like superfamily Amir_0361 278a0fd0001b3ce2aae2b284ef1c9422 203 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 124 171 1.2E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_0361 278a0fd0001b3ce2aae2b284ef1c9422 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 112 180 1.6E-7 T 14-10-2018 Amir_0361 278a0fd0001b3ce2aae2b284ef1c9422 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 127 143 5.7E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_0361 278a0fd0001b3ce2aae2b284ef1c9422 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 17 28 5.7E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_0361 278a0fd0001b3ce2aae2b284ef1c9422 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 165 5.7E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amir_4167 dac2f35f32ed6ac30e8d52222d5fb7fa 382 PRINTS PR01217 Proline rich extensin signature 313 330 5.0E-11 T 14-10-2018 Amir_4167 dac2f35f32ed6ac30e8d52222d5fb7fa 382 PRINTS PR01217 Proline rich extensin signature 337 362 5.0E-11 T 14-10-2018 Amir_4167 dac2f35f32ed6ac30e8d52222d5fb7fa 382 PRINTS PR01217 Proline rich extensin signature 265 286 5.0E-11 T 14-10-2018 Amir_4167 dac2f35f32ed6ac30e8d52222d5fb7fa 382 PRINTS PR01217 Proline rich extensin signature 289 305 5.0E-11 T 14-10-2018 Amir_4167 dac2f35f32ed6ac30e8d52222d5fb7fa 382 PRINTS PR01217 Proline rich extensin signature 157 169 5.0E-11 T 14-10-2018 Amir_2804 7cda1b32849773c6c204d0e88c23ac3c 265 Pfam PF13185 GAF domain 45 183 2.3E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2804 7cda1b32849773c6c204d0e88c23ac3c 265 SUPERFAMILY SSF55781 45 193 7.41E-21 T 14-10-2018 Amir_2804 7cda1b32849773c6c204d0e88c23ac3c 265 SMART SM01012 195 250 6.7E-10 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_2804 7cda1b32849773c6c204d0e88c23ac3c 265 SMART SM00065 45 193 0.002 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2804 7cda1b32849773c6c204d0e88c23ac3c 265 Pfam PF03861 ANTAR domain 198 249 1.7E-10 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_2804 7cda1b32849773c6c204d0e88c23ac3c 265 Gene3D G3DSA:3.30.450.40 18 195 8.7E-23 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_2804 7cda1b32849773c6c204d0e88c23ac3c 265 PIRSF PIRSF036625 12 259 5.5E-56 T 14-10-2018 IPR012074 GAF-ANTAR transcription anti-termination regulator, putative Amir_1344 4f0e97c16d42cdef9fd0df62d836a64c 247 Hamap MF_00013 Octanoyltransferase [lipB]. 14 222 33.123 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Amir_1344 4f0e97c16d42cdef9fd0df62d836a64c 247 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 40 206 3.2E-40 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Amir_1344 4f0e97c16d42cdef9fd0df62d836a64c 247 SUPERFAMILY SSF55681 13 222 1.49E-61 T 14-10-2018 Amir_1344 4f0e97c16d42cdef9fd0df62d836a64c 247 Gene3D G3DSA:3.30.930.10 9 220 2.6E-76 T 14-10-2018 Amir_1344 4f0e97c16d42cdef9fd0df62d836a64c 247 PIRSF PIRSF016262 11 228 3.5E-59 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Amir_1344 4f0e97c16d42cdef9fd0df62d836a64c 247 Pfam PF03099 Biotin/lipoate A/B protein ligase family 69 172 2.7E-10 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Amir_1344 4f0e97c16d42cdef9fd0df62d836a64c 247 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 81 96 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Amir_1344 4f0e97c16d42cdef9fd0df62d836a64c 247 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 85 137 2.0E-18 T 14-10-2018 Amir_4475 ac3c653b00fdee278c2cc932ea7aa4bb 390 Pfam PF14025 Protein of unknown function (DUF4241) 216 376 8.5E-37 T 14-10-2018 IPR025335 Protein of unknown function DUF4241 Amir_2056 c1dc66d90db37b5d2c8fde49950c1c43 271 Gene3D G3DSA:1.10.3720.10 18 268 8.2E-30 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2056 c1dc66d90db37b5d2c8fde49950c1c43 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 255 7.7E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_2056 c1dc66d90db37b5d2c8fde49950c1c43 271 SUPERFAMILY SSF161098 14 266 2.24E-34 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4262 8621973a4b74d162f5a2f5affda231c0 695 Pfam PF00144 Beta-lactamase 70 403 1.7E-58 T 14-10-2018 IPR001466 Beta-lactamase-related Amir_4262 8621973a4b74d162f5a2f5affda231c0 695 SUPERFAMILY SSF56601 63 414 1.22E-62 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_4262 8621973a4b74d162f5a2f5affda231c0 695 Gene3D G3DSA:3.40.710.10 66 406 8.0E-73 T 14-10-2018 Amir_3045 8d5bee7250cdba6a2e66a9fd012567fd 396 SUPERFAMILY SSF51658 33 367 7.88E-90 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Amir_3045 8d5bee7250cdba6a2e66a9fd012567fd 396 Gene3D G3DSA:3.20.20.150 10 388 7.6E-129 T 14-10-2018 Amir_3045 8d5bee7250cdba6a2e66a9fd012567fd 396 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 82 344 9.0E-4 T 14-10-2018 Amir_3045 8d5bee7250cdba6a2e66a9fd012567fd 396 Pfam PF06134 L-rhamnose isomerase (RhaA) 105 345 3.4E-8 T 14-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 Amir_3045 8d5bee7250cdba6a2e66a9fd012567fd 396 TIGRFAM TIGR02635 RhaI_grampos: L-rhamnose isomerase 13 386 1.5E-190 T 14-10-2018 IPR013457 Rhamnose isomerase-related Amir_5848 c1eb138d2418ddd423ae90577de28951 117 SUPERFAMILY SSF54593 6 114 9.16E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_5848 c1eb138d2418ddd423ae90577de28951 117 Gene3D G3DSA:3.10.180.10 4 117 2.2E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_4856 f7811890576a9f21922316c1cc86070b 468 Pfam PF00501 AMP-binding enzyme 5 348 2.5E-44 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4856 f7811890576a9f21922316c1cc86070b 468 Gene3D G3DSA:3.40.50.12780 1 346 2.6E-55 T 14-10-2018 Amir_4856 f7811890576a9f21922316c1cc86070b 468 ProSitePatterns PS00455 Putative AMP-binding domain signature. 114 125 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4856 f7811890576a9f21922316c1cc86070b 468 Gene3D G3DSA:3.30.300.30 349 462 6.0E-8 T 14-10-2018 Amir_4856 f7811890576a9f21922316c1cc86070b 468 SUPERFAMILY SSF56801 8 444 4.58E-68 T 14-10-2018 Amir_0743 677cd381b16b196f42f70a1d352c81cf 398 Pfam PF09594 Glycosyltransferase family 87 71 300 5.8E-52 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 Amir_3054 956daaad82350cc0362df0b5af281c45 388 SUPERFAMILY SSF55874 275 383 2.01E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3054 956daaad82350cc0362df0b5af281c45 388 Gene3D G3DSA:3.30.565.10 260 383 3.9E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3054 956daaad82350cc0362df0b5af281c45 388 Pfam PF07730 Histidine kinase 192 254 2.1E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_6669 d7bd24101ddcb9cf8fb0116f99067e02 527 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 16 517 17.735 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Amir_6669 d7bd24101ddcb9cf8fb0116f99067e02 527 Pfam PF00361 Proton-conducting membrane transporter 169 463 2.7E-77 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6669 d7bd24101ddcb9cf8fb0116f99067e02 527 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 143 516 8.0E-115 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Amir_1408 5539085481f5aa28226664113fb22cbd 278 Pfam PF07398 MDMPI C-terminal domain 173 267 9.0E-9 T 14-10-2018 IPR010872 MDMPI C-terminal Amir_1408 5539085481f5aa28226664113fb22cbd 278 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 21 159 5.7E-6 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 Amir_4210 63e1bb9cc2d2ce4fddb46c6c714c73cb 329 Pfam PF00892 EamA-like transporter family 10 144 1.1E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amir_4210 63e1bb9cc2d2ce4fddb46c6c714c73cb 329 SUPERFAMILY SSF103481 55 146 1.31E-7 T 14-10-2018 Amir_1217 50fd1c8fb887eb76743d36fcc5545213 147 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 39 141 9.7E-9 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Amir_1217 50fd1c8fb887eb76743d36fcc5545213 147 SUPERFAMILY SSF50118 36 141 9.81E-9 T 14-10-2018 Amir_5437 a21f2467699d0ed90be4a00d9c98443b 394 Gene3D G3DSA:3.40.50.10240 180 248 3.2E-7 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Amir_5437 a21f2467699d0ed90be4a00d9c98443b 394 Pfam PF12555 Thiamine pyrophosphokinase C terminal 336 385 3.7E-9 T 14-10-2018 IPR022215 Thiamine pyrophosphokinase C-terminal Amir_5437 a21f2467699d0ed90be4a00d9c98443b 394 SUPERFAMILY SSF63999 157 303 4.97E-17 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Amir_0996 aad76f9ef895c17ab7fa38925587b963 191 Pfam PF02632 BioY family 48 185 2.1E-34 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 Amir_0996 aad76f9ef895c17ab7fa38925587b963 191 Gene3D G3DSA:1.10.1760.20 19 188 1.8E-45 T 14-10-2018 Amir_0996 aad76f9ef895c17ab7fa38925587b963 191 PIRSF PIRSF016661 11 191 2.6E-35 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 Amir_6827 d7c640c846b6173dd66ed09c6ddebd06 144 Pfam PF14340 Domain of unknown function (DUF4395) 7 135 2.1E-42 T 14-10-2018 IPR025508 Domain of unknown function DUF4395 Amir_6827 d7c640c846b6173dd66ed09c6ddebd06 144 PIRSF PIRSF030042 2 57 4.0 T 14-10-2018 IPR016942 Uncharacterised conserved protein UCP030042 Amir_6827 d7c640c846b6173dd66ed09c6ddebd06 144 PIRSF PIRSF030042 53 139 5.6E-8 T 14-10-2018 IPR016942 Uncharacterised conserved protein UCP030042 Amir_3735 f48e20f32cb9c33c919087b9dff321ba 371 Pfam PF01699 Sodium/calcium exchanger protein 227 368 2.0E-13 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Amir_3735 f48e20f32cb9c33c919087b9dff321ba 371 Pfam PF01699 Sodium/calcium exchanger protein 40 191 7.9E-13 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Amir_4385 0da39c17bb48ab5fdfe5414eab94516a 560 Gene3D G3DSA:1.50.10.20 46 183 1.6E-21 T 14-10-2018 Amir_4385 0da39c17bb48ab5fdfe5414eab94516a 560 SUPERFAMILY SSF48239 273 555 2.23E-43 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Amir_4385 0da39c17bb48ab5fdfe5414eab94516a 560 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 391 526 1.6E-16 T 14-10-2018 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 Amir_4385 0da39c17bb48ab5fdfe5414eab94516a 560 Gene3D G3DSA:1.50.10.20 198 314 1.4E-5 T 14-10-2018 Amir_4385 0da39c17bb48ab5fdfe5414eab94516a 560 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 20 168 2.6E-8 T 14-10-2018 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 Amir_4385 0da39c17bb48ab5fdfe5414eab94516a 560 SUPERFAMILY SSF48239 48 238 4.19E-22 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Amir_4385 0da39c17bb48ab5fdfe5414eab94516a 560 Pfam PF00432 Prenyltransferase and squalene oxidase repeat 355 375 0.61 T 14-10-2018 IPR001330 PFTB repeat GO:0003824 Amir_4385 0da39c17bb48ab5fdfe5414eab94516a 560 Gene3D G3DSA:1.50.10.20 317 559 3.4E-40 T 14-10-2018 Amir_0371 a947e1a67fe3628263f7d2520a1fa3dd 478 SUPERFAMILY SSF53756 10 472 1.44E-142 T 14-10-2018 Amir_0371 a947e1a67fe3628263f7d2520a1fa3dd 478 Gene3D G3DSA:3.40.50.2000 34 469 3.7E-164 T 14-10-2018 Amir_0371 a947e1a67fe3628263f7d2520a1fa3dd 478 Pfam PF00982 Glycosyltransferase family 20 11 472 3.2E-151 T 14-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 Amir_0371 a947e1a67fe3628263f7d2520a1fa3dd 478 Gene3D G3DSA:3.40.50.2000 250 458 3.7E-164 T 14-10-2018 Amir_1031 427ddace13ef2b3d2cbc2f4bec22fd7a 312 Pfam PF00756 Putative esterase 52 304 3.9E-33 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Amir_1031 427ddace13ef2b3d2cbc2f4bec22fd7a 312 Gene3D G3DSA:3.40.50.1820 14 311 2.4E-82 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1031 427ddace13ef2b3d2cbc2f4bec22fd7a 312 SUPERFAMILY SSF53474 34 309 3.27E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0565 f68f97609777e5c0663ed0235d9ebe61 277 PIRSF PIRSF017393 3 277 7.1E-89 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type Amir_0565 f68f97609777e5c0663ed0235d9ebe61 277 Pfam PF04672 S-adenosyl methyltransferase 11 276 2.9E-82 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type Amir_0565 f68f97609777e5c0663ed0235d9ebe61 277 SUPERFAMILY SSF53335 18 258 5.32E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_0565 f68f97609777e5c0663ed0235d9ebe61 277 Gene3D G3DSA:3.40.50.150 5 277 7.2E-98 T 14-10-2018 Amir_0717 e69fe0b2e018f6c6f62a59665ea7aac0 458 SUPERFAMILY SSF88723 27 167 5.1E-11 T 14-10-2018 IPR029060 PIN-like domain superfamily Amir_0717 e69fe0b2e018f6c6f62a59665ea7aac0 458 Gene3D G3DSA:3.40.50.1010 24 169 1.7E-19 T 14-10-2018 Amir_0717 e69fe0b2e018f6c6f62a59665ea7aac0 458 Gene3D G3DSA:3.40.50.300 247 454 2.8E-54 T 14-10-2018 Amir_0717 e69fe0b2e018f6c6f62a59665ea7aac0 458 Pfam PF02562 PhoH-like protein 249 453 4.8E-55 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 Amir_0717 e69fe0b2e018f6c6f62a59665ea7aac0 458 Pfam PF13638 PIN domain 29 167 1.1E-28 T 14-10-2018 IPR002716 PIN domain Amir_0717 e69fe0b2e018f6c6f62a59665ea7aac0 458 SMART SM00670 27 154 1.6E-20 T 14-10-2018 IPR002716 PIN domain Amir_0717 e69fe0b2e018f6c6f62a59665ea7aac0 458 SUPERFAMILY SSF52540 247 409 4.47E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3154 6a9eb64b88470556e50ea7a81bbeb02d 382 SUPERFAMILY SSF50370 267 381 1.11E-23 T 14-10-2018 IPR035992 Ricin B-like lectins Amir_3154 6a9eb64b88470556e50ea7a81bbeb02d 382 SUPERFAMILY SSF117074 41 111 7.72E-12 T 14-10-2018 Amir_3154 6a9eb64b88470556e50ea7a81bbeb02d 382 SMART SM00458 246 382 9.5E-16 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3154 6a9eb64b88470556e50ea7a81bbeb02d 382 SUPERFAMILY SSF117074 127 200 4.97E-8 T 14-10-2018 Amir_3154 6a9eb64b88470556e50ea7a81bbeb02d 382 Gene3D G3DSA:2.60.40.10 40 130 2.4E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_3154 6a9eb64b88470556e50ea7a81bbeb02d 382 Gene3D G3DSA:2.60.40.10 131 248 3.8E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_3154 6a9eb64b88470556e50ea7a81bbeb02d 382 Pfam PF00652 Ricin-type beta-trefoil lectin domain 255 379 4.7E-16 T 14-10-2018 IPR000772 Ricin B, lectin domain Amir_3154 6a9eb64b88470556e50ea7a81bbeb02d 382 Pfam PF13620 Carboxypeptidase regulatory-like domain 66 122 1.4E-8 T 14-10-2018 Amir_3154 6a9eb64b88470556e50ea7a81bbeb02d 382 Gene3D G3DSA:2.80.10.50 251 381 4.1E-23 T 14-10-2018 Amir_0554 fa15d04e69a58a9d5c30c24186f2bf96 224 Pfam PF14016 Protein of unknown function (DUF4232) 89 221 7.1E-30 T 14-10-2018 IPR025326 Protein of unknown function DUF4232 Amir_0279 7901a1a6488d1beeaa0ecc8f72d8af7a 51 Pfam PF14029 Protein of unknown function (DUF4244) 3 47 9.1E-14 T 14-10-2018 IPR025338 Protein of unknown function DUF4244 Amir_2230 2c14b15b8bb0c98e455999b845956dda 319 Pfam PF12870 Domain of unknown function (DUF4878) 186 304 2.8E-5 T 14-10-2018 IPR024267 Domain of unknown function (DUF4878) Amir_4215 3fc5a948e140fc39577140e2c9baf5b3 547 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 53 452 9.8E-103 T 14-10-2018 IPR010071 Amino acid adenylation domain Amir_4215 3fc5a948e140fc39577140e2c9baf5b3 547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 172 183 - T 14-10-2018 IPR020845 AMP-binding, conserved site Amir_4215 3fc5a948e140fc39577140e2c9baf5b3 547 Pfam PF00501 AMP-binding enzyme 33 427 2.8E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Amir_4215 3fc5a948e140fc39577140e2c9baf5b3 547 SUPERFAMILY SSF56801 25 525 1.02E-122 T 14-10-2018 Amir_4215 3fc5a948e140fc39577140e2c9baf5b3 547 Gene3D G3DSA:3.40.50.12780 25 420 1.7E-105 T 14-10-2018 Amir_4215 3fc5a948e140fc39577140e2c9baf5b3 547 Gene3D G3DSA:3.30.300.30 423 534 4.2E-16 T 14-10-2018 Amir_3020 e5f91398a0343e47746685004f01c8fc 185 Pfam PF03358 NADPH-dependent FMN reductase 4 149 3.1E-32 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Amir_3020 e5f91398a0343e47746685004f01c8fc 185 Gene3D G3DSA:3.40.50.360 2 185 6.6E-43 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Amir_3020 e5f91398a0343e47746685004f01c8fc 185 SUPERFAMILY SSF52218 4 177 2.0E-38 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Amir_0882 f72a328173e53cb3728ba04a9feb561b 181 SUPERFAMILY SSF52218 4 145 1.16E-22 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Amir_0882 f72a328173e53cb3728ba04a9feb561b 181 Pfam PF03358 NADPH-dependent FMN reductase 3 143 3.6E-24 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Amir_0882 f72a328173e53cb3728ba04a9feb561b 181 Gene3D G3DSA:3.40.50.360 2 179 1.2E-35 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Amir_4913 a36c1f8c82132bda450ca3c7a3e8bbc6 740 Pfam PF01804 Penicillin amidase 77 341 7.9E-43 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 Amir_4913 a36c1f8c82132bda450ca3c7a3e8bbc6 740 Pfam PF01804 Penicillin amidase 365 733 1.8E-31 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 Amir_4913 a36c1f8c82132bda450ca3c7a3e8bbc6 740 PIRSF PIRSF001227 55 347 2.5E-41 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 Amir_4913 a36c1f8c82132bda450ca3c7a3e8bbc6 740 PIRSF PIRSF001227 363 739 2.1E-22 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 Amir_4913 a36c1f8c82132bda450ca3c7a3e8bbc6 740 Gene3D G3DSA:3.60.20.10 278 367 2.0E-8 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_4913 a36c1f8c82132bda450ca3c7a3e8bbc6 740 Gene3D G3DSA:3.60.20.10 627 739 5.6E-7 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_4913 a36c1f8c82132bda450ca3c7a3e8bbc6 740 Gene3D G3DSA:3.60.20.10 389 564 1.4E-10 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_4913 a36c1f8c82132bda450ca3c7a3e8bbc6 740 SUPERFAMILY SSF56235 77 733 1.52E-86 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amir_4913 a36c1f8c82132bda450ca3c7a3e8bbc6 740 Gene3D G3DSA:1.10.439.10 75 201 2.5E-31 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 Amir_0031 c7ecdfcd55b8b57bb0c643357d1b1e9d 395 Gene3D G3DSA:3.20.20.10 23 266 2.0E-51 T 14-10-2018 IPR029066 PLP-binding barrel Amir_0031 c7ecdfcd55b8b57bb0c643357d1b1e9d 395 SUPERFAMILY SSF51419 22 270 9.65E-21 T 14-10-2018 IPR029066 PLP-binding barrel Amir_0031 c7ecdfcd55b8b57bb0c643357d1b1e9d 395 Pfam PF01168 Alanine racemase, N-terminal domain 21 268 5.2E-14 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amir_1294 ea83dbf88a2b8bc86f8b21680004d84b 393 Gene3D G3DSA:1.10.443.10 184 388 6.8E-31 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amir_1294 ea83dbf88a2b8bc86f8b21680004d84b 393 SUPERFAMILY SSF56349 76 372 5.59E-49 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amir_1294 ea83dbf88a2b8bc86f8b21680004d84b 393 Gene3D G3DSA:1.10.150.130 72 182 7.7E-17 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Amir_1294 ea83dbf88a2b8bc86f8b21680004d84b 393 Pfam PF00589 Phage integrase family 186 372 4.1E-14 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amir_6135 d45e6764fa96b478affcbe8ff72436da 121 Gene3D G3DSA:2.60.15.10 1 120 5.8E-30 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6135 d45e6764fa96b478affcbe8ff72436da 121 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 116 18.176 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6135 d45e6764fa96b478affcbe8ff72436da 121 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 84 1.7E-26 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6135 d45e6764fa96b478affcbe8ff72436da 121 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 104 1.0E-25 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6135 d45e6764fa96b478affcbe8ff72436da 121 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 84 9.0E-24 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_6135 d45e6764fa96b478affcbe8ff72436da 121 SUPERFAMILY SSF51344 4 84 9.81E-21 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amir_7061 3e97a37491c67b5e07bec6f41196986f 200 Pfam PF08044 Domain of unknown function (DUF1707) 7 59 5.8E-20 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 Amir_0409 e58d5fe48366e572ceeeace0eb2381ad 65 SUPERFAMILY SSF54285 3 65 5.38E-13 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Amir_0409 e58d5fe48366e572ceeeace0eb2381ad 65 Gene3D G3DSA:3.10.20.30 2 65 6.7E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Amir_0409 e58d5fe48366e572ceeeace0eb2381ad 65 Pfam PF02597 ThiS family 4 65 1.6E-13 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Amir_0409 e58d5fe48366e572ceeeace0eb2381ad 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 5 65 1.7E-16 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis Amir_5406 a17fcc838cb4222ec9ec7462ac255f3c 205 Gene3D G3DSA:3.40.50.880 1 204 1.2E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_5406 a17fcc838cb4222ec9ec7462ac255f3c 205 Pfam PF01965 DJ-1/PfpI family 3 178 2.8E-16 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Amir_5406 a17fcc838cb4222ec9ec7462ac255f3c 205 SUPERFAMILY SSF52317 1 196 1.52E-29 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_3488 3d1b0f8d6d150da9c7e0c1d09255228c 355 Pfam PF06224 Winged helix DNA-binding domain 29 345 2.1E-68 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 Amir_2158 b6aff0ddf5a9d34559321ee1982903b9 342 Pfam PF02470 MlaD protein 42 116 4.3E-16 T 14-10-2018 IPR003399 Mce/MlaD Amir_2158 b6aff0ddf5a9d34559321ee1982903b9 342 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 15 295 5.0E-60 T 14-10-2018 IPR005693 Virulence factor Mce protein Amir_5542 a0709b1729f29b5c4d75522c5b51b520 171 SUPERFAMILY SSF109854 6 166 2.29E-32 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_5542 a0709b1729f29b5c4d75522c5b51b520 171 Gene3D G3DSA:1.20.120.450 6 170 3.2E-26 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_5542 a0709b1729f29b5c4d75522c5b51b520 171 Pfam PF04978 Protein of unknown function (DUF664) 22 167 3.7E-35 T 14-10-2018 IPR007061 Protein of unknown function DUF664 Amir_4431 c782f4a9356c549472ce1766d07f6e57 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 98 1.2E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amir_4431 c782f4a9356c549472ce1766d07f6e57 352 Gene3D G3DSA:3.40.50.720 133 290 7.4E-78 T 14-10-2018 Amir_4431 c782f4a9356c549472ce1766d07f6e57 352 Pfam PF13602 Zinc-binding dehydrogenase 196 344 1.1E-17 T 14-10-2018 Amir_4431 c782f4a9356c549472ce1766d07f6e57 352 SMART SM00829 21 344 3.1E-14 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amir_4431 c782f4a9356c549472ce1766d07f6e57 352 Gene3D G3DSA:3.90.180.10 21 340 7.4E-78 T 14-10-2018 Amir_4431 c782f4a9356c549472ce1766d07f6e57 352 SUPERFAMILY SSF51735 124 311 6.48E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4431 c782f4a9356c549472ce1766d07f6e57 352 SUPERFAMILY SSF50129 15 149 5.63E-30 T 14-10-2018 IPR011032 GroES-like superfamily Amir_0069 3b5e8882f7580ccedb5d03952142431b 603 Pfam PF00474 Sodium:solute symporter family 35 185 1.6E-22 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Amir_0069 3b5e8882f7580ccedb5d03952142431b 603 Pfam PF00474 Sodium:solute symporter family 308 504 3.2E-15 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Amir_0069 3b5e8882f7580ccedb5d03952142431b 603 Gene3D G3DSA:1.20.1730.10 279 564 1.2E-22 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Amir_0069 3b5e8882f7580ccedb5d03952142431b 603 Gene3D G3DSA:1.20.1730.10 24 232 1.7E-26 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Amir_3570 b56835f4eb4c2a0db6945531b9addcf9 127 Gene3D G3DSA:3.10.450.50 17 123 6.1E-11 T 14-10-2018 Amir_3570 b56835f4eb4c2a0db6945531b9addcf9 127 SUPERFAMILY SSF54427 30 123 1.38E-8 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_3712 1d4c92ddfe9fe37923ef3889d26db2c6 286 SUPERFAMILY SSF51735 2 147 2.79E-8 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3712 1d4c92ddfe9fe37923ef3889d26db2c6 286 Gene3D G3DSA:3.40.50.720 1 175 1.2E-27 T 14-10-2018 Amir_3712 1d4c92ddfe9fe37923ef3889d26db2c6 286 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 119 2.9E-15 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain Amir_2026 7835ae7ea3a28b1391aa3eab5a9db10a 423 Gene3D G3DSA:3.30.470.20 114 417 1.5E-44 T 14-10-2018 Amir_2026 7835ae7ea3a28b1391aa3eab5a9db10a 423 SUPERFAMILY SSF56059 112 328 3.71E-37 T 14-10-2018 Amir_2026 7835ae7ea3a28b1391aa3eab5a9db10a 423 Pfam PF02222 ATP-grasp domain 131 292 3.1E-7 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Amir_1582 c287c2f2093bff5cd31fc458c5a646ef 81 Pfam PF11239 Protein of unknown function (DUF3040) 1 74 1.4E-14 T 14-10-2018 IPR021401 Protein of unknown function DUF3040 Amir_0116 ed52a465aa35afd7596c2ec337d204bc 150 Pfam PF03994 Domain of Unknown Function (DUF350) 95 149 6.9E-13 T 14-10-2018 IPR007140 Protein of unknown function DUF350 Amir_0116 ed52a465aa35afd7596c2ec337d204bc 150 Pfam PF03994 Domain of Unknown Function (DUF350) 25 78 1.5E-13 T 14-10-2018 IPR007140 Protein of unknown function DUF350 Amir_3324 f564c266ed8df24302d39179f518caa0 268 Pfam PF12802 MarR family 104 161 2.0E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_3324 f564c266ed8df24302d39179f518caa0 268 SUPERFAMILY SSF46785 87 169 2.0E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3324 f564c266ed8df24302d39179f518caa0 268 Gene3D G3DSA:1.10.10.10 81 169 1.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3324 f564c266ed8df24302d39179f518caa0 268 Pfam PF13936 Helix-turn-helix domain 5 45 4.7E-14 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain Amir_2648 d79c1328e39d84c7447e91c6100c093e 160 SUPERFAMILY SSF89623 4 151 5.89E-46 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Amir_2648 d79c1328e39d84c7447e91c6100c093e 160 TIGRFAM TIGR02133 RPI_actino: ribose 5-phosphate isomerase 5 151 4.2E-63 T 14-10-2018 IPR011860 Ribose 5-phosphate isomerase GO:0004751 Amir_2648 d79c1328e39d84c7447e91c6100c093e 160 Pfam PF02502 Ribose/Galactose Isomerase 7 145 6.8E-43 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Amir_2648 d79c1328e39d84c7447e91c6100c093e 160 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 7 151 3.0E-33 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Amir_2648 d79c1328e39d84c7447e91c6100c093e 160 PIRSF PIRSF005384 5 154 1.9E-44 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Amir_2648 d79c1328e39d84c7447e91c6100c093e 160 Gene3D G3DSA:3.40.1400.10 2 152 4.2E-46 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Amir_5269 fbd9c24b686bf1572790636f9d610a7d 395 SMART SM00558 90 239 0.0011 T 14-10-2018 IPR003347 JmjC domain Amir_5269 fbd9c24b686bf1572790636f9d610a7d 395 Pfam PF08007 Cupin superfamily protein 17 265 6.2E-36 T 14-10-2018 IPR003347 JmjC domain Amir_5269 fbd9c24b686bf1572790636f9d610a7d 395 Gene3D G3DSA:2.60.120.650 1 230 8.2E-50 T 14-10-2018 Amir_5269 fbd9c24b686bf1572790636f9d610a7d 395 SUPERFAMILY SSF51197 12 288 1.24E-40 T 14-10-2018 Amir_4430 501286daded8f2cd471e4eb6ad8176be 145 Gene3D G3DSA:3.30.70.100 6 100 4.0E-7 T 14-10-2018 Amir_4430 501286daded8f2cd471e4eb6ad8176be 145 Pfam PF07876 Stress responsive A/B Barrel Domain 9 99 1.6E-11 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel Amir_4430 501286daded8f2cd471e4eb6ad8176be 145 SMART SM00886 9 100 3.9E-8 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel Amir_4430 501286daded8f2cd471e4eb6ad8176be 145 SUPERFAMILY SSF54909 7 103 3.52E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_1513 77b2a73dfbe2f6235c14e30d5594d291 99 Pfam PF13834 Domain of unknown function (DUF4193) 1 99 3.0E-44 T 14-10-2018 IPR025242 Protein of unknown function DUF4193 Amir_3221 8468029f0b629747a245b1ef86ad9f51 281 Pfam PF09359 VTC domain 30 188 3.2E-14 T 14-10-2018 IPR018966 VTC domain Amir_3221 8468029f0b629747a245b1ef86ad9f51 281 SUPERFAMILY SSF55154 33 234 6.21E-7 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 Amir_0569 bedb2a3b46b8f8437141d77f043b0855 417 Pfam PF13406 Transglycosylase SLT domain 122 169 4.2E-7 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 Amir_0569 bedb2a3b46b8f8437141d77f043b0855 417 SUPERFAMILY SSF53955 44 203 2.81E-31 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Amir_6145 aeeca8ee4c4cbe1c5913a20728dcb271 389 Pfam PF00953 Glycosyl transferase family 4 95 261 1.2E-31 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Amir_4438 db19bf64225954a06df967c9b409b579 246 SMART SM00382 28 216 9.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_4438 db19bf64225954a06df967c9b409b579 246 Pfam PF00005 ABC transporter 19 167 3.4E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4438 db19bf64225954a06df967c9b409b579 246 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_4438 db19bf64225954a06df967c9b409b579 246 Gene3D G3DSA:3.40.50.300 1 242 3.9E-59 T 14-10-2018 Amir_4438 db19bf64225954a06df967c9b409b579 246 SUPERFAMILY SSF52540 3 226 9.99E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2554 07d10bf68a6cba3bf7f24a0a438dd3f7 152 Gene3D G3DSA:3.40.50.2000 48 84 6.2E-6 T 14-10-2018 Amir_2554 07d10bf68a6cba3bf7f24a0a438dd3f7 152 Gene3D G3DSA:3.40.50.2000 3 47 1.5E-5 T 14-10-2018 Amir_2554 07d10bf68a6cba3bf7f24a0a438dd3f7 152 Gene3D G3DSA:3.40.50.2000 85 133 6.2E-6 T 14-10-2018 Amir_3519 a4fae66220528b86ed97f3a2c20e82df 249 Pfam PF13714 Phosphoenolpyruvate phosphomutase 18 241 8.5E-70 T 14-10-2018 Amir_3519 a4fae66220528b86ed97f3a2c20e82df 249 SUPERFAMILY SSF51621 15 247 7.18E-58 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Amir_3519 a4fae66220528b86ed97f3a2c20e82df 249 Gene3D G3DSA:3.20.20.60 4 243 1.9E-66 T 14-10-2018 Amir_3242 a93367d8a2403a17fd3485290c68eab8 200 Pfam PF17338 Gene 88 protein 1 189 7.3E-91 T 14-10-2018 IPR020290 Protein of unknown function, Gp85/88 Amir_3242 a93367d8a2403a17fd3485290c68eab8 200 ProDom PD038511 GENE GP88 GP85 PAE1962 2 89 8.0E-7 T 14-10-2018 IPR020290 Protein of unknown function, Gp85/88 Amir_5372 74211ad1a7c56d6dde4afc382aafbf53 100 Pfam PF03551 Transcriptional regulator PadR-like family 16 71 6.1E-7 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal Amir_5372 74211ad1a7c56d6dde4afc382aafbf53 100 SUPERFAMILY SSF46785 4 86 7.86E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5372 74211ad1a7c56d6dde4afc382aafbf53 100 Gene3D G3DSA:1.10.10.10 4 98 1.2E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4774 083f5c8dc501bf1901b2cd297254bfb4 334 Pfam PF06030 Bacterial protein of unknown function (DUF916) 58 151 3.8E-7 T 14-10-2018 IPR010317 Protein of unknown function DUF916, cell surface putative Amir_4029 fe792492efb85d60d3adb38d59420ee9 824 SUPERFAMILY SSF81296 727 809 1.15E-6 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_4029 fe792492efb85d60d3adb38d59420ee9 824 Pfam PF13313 Domain of unknown function (DUF4082) 35 177 3.1E-47 T 14-10-2018 IPR025141 Domain of unknown function DUF4082 Amir_4029 fe792492efb85d60d3adb38d59420ee9 824 Pfam PF13313 Domain of unknown function (DUF4082) 562 713 1.1E-53 T 14-10-2018 IPR025141 Domain of unknown function DUF4082 Amir_4029 fe792492efb85d60d3adb38d59420ee9 824 Pfam PF13313 Domain of unknown function (DUF4082) 297 446 2.6E-51 T 14-10-2018 IPR025141 Domain of unknown function DUF4082 Amir_4029 fe792492efb85d60d3adb38d59420ee9 824 Pfam PF13205 Bacterial Ig-like domain 722 821 1.1E-10 T 14-10-2018 IPR032812 SbsA, Ig-like domain Amir_4029 fe792492efb85d60d3adb38d59420ee9 824 Pfam PF13205 Bacterial Ig-like domain 190 285 4.6E-13 T 14-10-2018 IPR032812 SbsA, Ig-like domain Amir_4029 fe792492efb85d60d3adb38d59420ee9 824 Pfam PF13205 Bacterial Ig-like domain 457 553 7.4E-14 T 14-10-2018 IPR032812 SbsA, Ig-like domain Amir_1480 377adcd092695e3a04ab9191eab1d241 59 Pfam PF04149 Domain of unknown function (DUF397) 6 56 1.3E-18 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_5157 4c8c9538e2413f52a4123d3677b04295 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 61 1.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_5157 4c8c9538e2413f52a4123d3677b04295 193 SUPERFAMILY SSF46689 3 84 2.54E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_5157 4c8c9538e2413f52a4123d3677b04295 193 Gene3D G3DSA:1.10.357.10 1 193 5.3E-44 T 14-10-2018 Amir_5157 4c8c9538e2413f52a4123d3677b04295 193 SUPERFAMILY SSF48498 80 189 5.44E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_2348 3d878522d1a0760a7edd1cf945b7a4c1 105 Pfam PF02049 Flagellar hook-basal body complex protein FliE 23 104 4.3E-19 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Amir_2348 3d878522d1a0760a7edd1cf945b7a4c1 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 35 51 7.6E-5 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Amir_2348 3d878522d1a0760a7edd1cf945b7a4c1 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 90 103 7.6E-5 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Amir_2348 3d878522d1a0760a7edd1cf945b7a4c1 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 69 85 7.6E-5 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Amir_2348 3d878522d1a0760a7edd1cf945b7a4c1 105 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 6 105 13.085 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Amir_2311 26315441ee4a7ae8abb1da0b42be863f 345 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 5 338 5.5E-153 T 14-10-2018 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative Amir_2311 26315441ee4a7ae8abb1da0b42be863f 345 Gene3D G3DSA:3.20.20.30 2 343 3.8E-85 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_2311 26315441ee4a7ae8abb1da0b42be863f 345 Pfam PF00296 Luciferase-like monooxygenase 24 306 1.6E-46 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_2311 26315441ee4a7ae8abb1da0b42be863f 345 SUPERFAMILY SSF51679 12 339 4.32E-78 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_3816 05f5bfc056d59aa80aa9f5c9dc7a832a 115 TIGRFAM TIGR03462 CarR_dom_SF: lycopene cyclase domain 5 94 3.1E-19 T 14-10-2018 IPR017825 Lycopene cyclase domain GO:0016872 KEGG: 00906+2.5.1.32+5.5.1.19|MetaCyc: PWY-5943|MetaCyc: PWY-5947|MetaCyc: PWY-6279|MetaCyc: PWY-7591|MetaCyc: PWY-7938|MetaCyc: PWY-7939|MetaCyc: PWY-7947 Amir_2411 a1ff4ef1d422fc887668fca0ab9c160a 133 SUPERFAMILY SSF160424 3 128 2.62E-18 T 14-10-2018 IPR036170 Probable antitoxin YezG superfamily Amir_2939 5bb7a6e59882e44162a8f61689103e63 146 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 6 145 4.9E-28 T 14-10-2018 IPR011747 Conserved hypothetical protein CHP02241 Amir_2939 5bb7a6e59882e44162a8f61689103e63 146 Pfam PF06841 T4-like virus tail tube protein gp19 11 143 1.4E-25 T 14-10-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 Amir_2909 6866f4c0c793b3d30aac8accf3f58605 1116 Pfam PF13569 Domain of unknown function (DUF4132) 843 1024 2.9E-50 T 14-10-2018 IPR025406 Domain of unknown function DUF4132 Amir_3919 73312eafa2c041e17084872bf307bbf3 263 SUPERFAMILY SSF53335 102 233 2.78E-9 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3919 73312eafa2c041e17084872bf307bbf3 263 Gene3D G3DSA:3.40.50.150 51 258 3.8E-27 T 14-10-2018 Amir_1947 04fb9d99965656ccffdb52e0b48840e7 235 Gene3D G3DSA:3.30.505.50 191 234 4.1E-8 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily Amir_1947 04fb9d99965656ccffdb52e0b48840e7 235 Gene3D G3DSA:3.30.505.50 124 170 1.1E-9 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily Amir_1947 04fb9d99965656ccffdb52e0b48840e7 235 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 111 164 1.8E-12 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal Amir_1947 04fb9d99965656ccffdb52e0b48840e7 235 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 183 231 1.4E-8 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal Amir_6217 d87d8a11a16ec09e590405d45609bfc1 158 Gene3D G3DSA:2.30.110.10 2 158 1.4E-41 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_6217 d87d8a11a16ec09e590405d45609bfc1 158 Pfam PF01613 Flavin reductase like domain 13 157 1.9E-29 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amir_6217 d87d8a11a16ec09e590405d45609bfc1 158 SUPERFAMILY SSF50475 8 157 4.91E-38 T 14-10-2018 Amir_6217 d87d8a11a16ec09e590405d45609bfc1 158 SMART SM00903 12 156 4.5E-38 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amir_1564 022eff20a407504c5a291aa27e01da15 306 TIGRFAM TIGR04222 near_uncomplex: TIGR04222 domain 14 213 7.2E-46 T 14-10-2018 IPR026467 Ser/Gly rich, Cys interspersed, C-terminal domain Amir_2559 2be5520909d59a7789a92371f8a50969 285 Pfam PF11350 Protein of unknown function (DUF3152) 85 284 2.8E-69 T 14-10-2018 IPR022603 Domain of unknown function DUF3152 Amir_2559 2be5520909d59a7789a92371f8a50969 285 SUPERFAMILY SSF55486 129 263 1.49E-12 T 14-10-2018 Amir_3673 862318c6a30de01e8bc8195d64be2f7e 335 SUPERFAMILY SSF51197 14 318 1.28E-83 T 14-10-2018 Amir_3673 862318c6a30de01e8bc8195d64be2f7e 335 Gene3D G3DSA:3.60.130.10 14 318 1.2E-100 T 14-10-2018 Amir_3673 862318c6a30de01e8bc8195d64be2f7e 335 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 25 317 5.4E-50 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 Amir_4161 17db694558b9dc6c2781da6c57cb1d42 503 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 441 1.6E-129 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane Amir_2838 3c211c7c4bd73b94d79c67372cb47847 946 SUPERFAMILY SSF48208 267 743 3.74E-21 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_2838 3c211c7c4bd73b94d79c67372cb47847 946 Pfam PF00754 F5/8 type C domain 817 936 4.5E-9 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain Amir_2838 3c211c7c4bd73b94d79c67372cb47847 946 SUPERFAMILY SSF49785 802 945 3.33E-11 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_2838 3c211c7c4bd73b94d79c67372cb47847 946 Gene3D G3DSA:1.50.10.10 342 577 4.2E-9 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Amir_2838 3c211c7c4bd73b94d79c67372cb47847 946 Gene3D G3DSA:2.60.120.260 801 946 1.9E-31 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Amir_0669 847c1fafba49586898c3bc0e9c5818bc 314 SUPERFAMILY SSF53955 132 299 4.64E-33 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Amir_0669 847c1fafba49586898c3bc0e9c5818bc 314 Gene3D G3DSA:1.10.530.10 145 305 3.0E-7 T 14-10-2018 Amir_2190 6b2c0747f6e3c86cf26368aff6a42e52 264 Pfam PF14011 EspG family 10 259 3.8E-51 T 14-10-2018 IPR025734 EspG family Amir_4192 cfcb4cc024717adb06669f8a8e43daef 141 SUPERFAMILY SSF46785 6 136 2.02E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4192 cfcb4cc024717adb06669f8a8e43daef 141 Gene3D G3DSA:3.30.1490.190 86 141 4.4E-13 T 14-10-2018 Amir_4192 cfcb4cc024717adb06669f8a8e43daef 141 Pfam PF01475 Ferric uptake regulator family 14 127 9.0E-16 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Amir_4192 cfcb4cc024717adb06669f8a8e43daef 141 Gene3D G3DSA:1.10.10.10 3 84 4.3E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2184 4ce903a9a49c5c2f2be0c2f513cd9215 257 ProDom PD040491 SCO1799 RV1486C/MT1533 MB1522C CGL1536 ML1804 MAV321 2 242 3.0E-12 T 14-10-2018 Amir_1877 e39aeda89bb70e82ed74b36433e523b9 388 SUPERFAMILY SSF54060 169 381 6.12E-54 T 14-10-2018 Amir_1877 e39aeda89bb70e82ed74b36433e523b9 388 Pfam PF04231 Endonuclease I 171 381 1.2E-41 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 Amir_5397 4940b703591b74ae8e46bdad3f479526 1011 SMART SM00382 315 468 0.0082 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5397 4940b703591b74ae8e46bdad3f479526 1011 Gene3D G3DSA:3.40.50.300 294 439 1.6E-5 T 14-10-2018 Amir_5397 4940b703591b74ae8e46bdad3f479526 1011 SUPERFAMILY SSF52540 291 437 1.48E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2427 c78d68ea3dcc73a24a8f524ed09610b4 267 Pfam PF00561 alpha/beta hydrolase fold 22 252 3.3E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_2427 c78d68ea3dcc73a24a8f524ed09610b4 267 PRINTS PR00412 Epoxide hydrolase signature 106 119 1.1E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_2427 c78d68ea3dcc73a24a8f524ed09610b4 267 PRINTS PR00412 Epoxide hydrolase signature 241 263 1.1E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_2427 c78d68ea3dcc73a24a8f524ed09610b4 267 PRINTS PR00412 Epoxide hydrolase signature 47 62 1.1E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Amir_2427 c78d68ea3dcc73a24a8f524ed09610b4 267 Gene3D G3DSA:3.40.50.1820 2 264 1.6E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2427 c78d68ea3dcc73a24a8f524ed09610b4 267 SUPERFAMILY SSF53474 2 266 3.77E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1262 15fc4e0a6f548b4684d68022a47f797c 133 SUPERFAMILY SSF46785 25 108 2.79E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1262 15fc4e0a6f548b4684d68022a47f797c 133 Pfam PF01022 Bacterial regulatory protein, arsR family 43 86 4.5E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_1262 15fc4e0a6f548b4684d68022a47f797c 133 Gene3D G3DSA:1.10.10.10 16 130 3.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1262 15fc4e0a6f548b4684d68022a47f797c 133 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 5.3E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_1262 15fc4e0a6f548b4684d68022a47f797c 133 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 84 99 5.3E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_1262 15fc4e0a6f548b4684d68022a47f797c 133 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 67 5.3E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_1262 15fc4e0a6f548b4684d68022a47f797c 133 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 52 5.3E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_1262 15fc4e0a6f548b4684d68022a47f797c 133 SMART SM00418 35 113 8.3E-29 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_5423 8a1dad66c6b8fad9cb7e37088688e51b 298 SUPERFAMILY SSF161098 92 282 2.88E-27 T 14-10-2018 IPR035906 MetI-like superfamily Amir_5423 8a1dad66c6b8fad9cb7e37088688e51b 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 275 2.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_5423 8a1dad66c6b8fad9cb7e37088688e51b 298 Gene3D G3DSA:1.10.3720.10 91 286 1.2E-23 T 14-10-2018 IPR035906 MetI-like superfamily Amir_7006 c6c4fcb1619997a4033680066a7ee751 497 Pfam PF00350 Dynamin family 33 148 1.3E-10 T 14-10-2018 IPR022812 Dynamin superfamily Amir_7006 c6c4fcb1619997a4033680066a7ee751 497 SUPERFAMILY SSF52540 29 212 9.55E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_7006 c6c4fcb1619997a4033680066a7ee751 497 Gene3D G3DSA:3.40.50.300 33 234 1.0E-22 T 14-10-2018 Amir_6898 7bd575915b96b63f4240187f44c4e80e 176 Pfam PF14011 EspG family 9 150 8.9E-17 T 14-10-2018 IPR025734 EspG family Amir_2602 6034b597f13dd09a70ba275d22d82830 89 Gene3D G3DSA:1.10.10.10 20 79 1.0E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2602 6034b597f13dd09a70ba275d22d82830 89 SUPERFAMILY SSF88659 16 75 3.49E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amir_2602 6034b597f13dd09a70ba275d22d82830 89 Pfam PF08281 Sigma-70, region 4 23 73 1.4E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amir_0467 4e719e813f4016f67f2ce8da46a237f4 160 Gene3D G3DSA:3.40.980.10 2 160 4.3E-49 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amir_0467 4e719e813f4016f67f2ce8da46a237f4 160 SUPERFAMILY SSF53218 7 154 1.3E-39 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amir_0467 4e719e813f4016f67f2ce8da46a237f4 160 Pfam PF00994 Probable molybdopterin binding domain 9 143 3.0E-26 T 14-10-2018 IPR001453 MoaB/Mog domain Amir_0467 4e719e813f4016f67f2ce8da46a237f4 160 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 66 79 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Amir_0467 4e719e813f4016f67f2ce8da46a237f4 160 SMART SM00852 8 150 8.7E-20 T 14-10-2018 IPR001453 MoaB/Mog domain Amir_0467 4e719e813f4016f67f2ce8da46a237f4 160 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 7 142 2.2E-28 T 14-10-2018 IPR001453 MoaB/Mog domain Amir_5833 9286a6c84c4c67794d06b32e39ed059d 98 Gene3D G3DSA:3.30.70.1120 1 96 3.7E-23 T 14-10-2018 IPR036746 TT1725-like superfamily Amir_5833 9286a6c84c4c67794d06b32e39ed059d 98 SUPERFAMILY SSF103007 2 94 2.35E-29 T 14-10-2018 IPR036746 TT1725-like superfamily Amir_5833 9286a6c84c4c67794d06b32e39ed059d 98 Pfam PF04456 Protein of unknown function (DUF503) 3 89 2.3E-31 T 14-10-2018 IPR007546 Protein of unknown function DUF503 Amir_2730 c97b2c5ba1761f8a927c1bca2b13e526 350 Pfam PF01032 FecCD transport family 22 342 1.1E-88 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_2730 c97b2c5ba1761f8a927c1bca2b13e526 350 SUPERFAMILY SSF81345 12 343 3.66E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_2730 c97b2c5ba1761f8a927c1bca2b13e526 350 Gene3D G3DSA:1.10.3470.10 10 348 6.4E-96 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_6606 5fa104daa7afe2504dd2dbea00dc0672 82 SUPERFAMILY SSF46561 7 67 3.53E-21 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6606 5fa104daa7afe2504dd2dbea00dc0672 82 Pfam PF00831 Ribosomal L29 protein 8 64 5.1E-23 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6606 5fa104daa7afe2504dd2dbea00dc0672 82 TIGRFAM TIGR00012 L29: ribosomal protein uL29 9 64 2.8E-18 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_6606 5fa104daa7afe2504dd2dbea00dc0672 82 Gene3D G3DSA:1.10.287.310 6 70 3.5E-25 T 14-10-2018 Amir_6606 5fa104daa7afe2504dd2dbea00dc0672 82 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 5 64 16.735 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amir_0961 ba82c6b0d9318beab403e1899c1b4aa3 677 SUPERFAMILY SSF53335 101 349 1.73E-53 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_0961 ba82c6b0d9318beab403e1899c1b4aa3 677 Pfam PF02384 N-6 DNA Methylase 122 353 4.3E-39 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Amir_0961 ba82c6b0d9318beab403e1899c1b4aa3 677 Gene3D G3DSA:3.90.220.20 524 668 5.8E-10 T 14-10-2018 Amir_0961 ba82c6b0d9318beab403e1899c1b4aa3 677 SUPERFAMILY SSF116734 542 660 2.07E-8 T 14-10-2018 Amir_0961 ba82c6b0d9318beab403e1899c1b4aa3 677 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 228 234 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Amir_0961 ba82c6b0d9318beab403e1899c1b4aa3 677 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 225 237 2.8E-17 T 14-10-2018 Amir_0961 ba82c6b0d9318beab403e1899c1b4aa3 677 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 138 154 2.8E-17 T 14-10-2018 Amir_0961 ba82c6b0d9318beab403e1899c1b4aa3 677 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 259 283 2.8E-17 T 14-10-2018 Amir_0961 ba82c6b0d9318beab403e1899c1b4aa3 677 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 160 174 2.8E-17 T 14-10-2018 Amir_0961 ba82c6b0d9318beab403e1899c1b4aa3 677 Gene3D G3DSA:3.40.50.150 118 362 6.6E-55 T 14-10-2018 Amir_0636 7fd53cd3ac0e69a93f4cd8a83e1f4a54 523 Pfam PF16192 C-terminal four TMM region of protein-O-mannosyltransferase 332 522 4.2E-19 T 14-10-2018 IPR032421 Protein O-mannosyl-transferase, C-terminal four TM domain KEGG: 00514+2.4.1.109|KEGG: 00515+2.4.1.109|MetaCyc: PWY-7921|MetaCyc: PWY-7922|MetaCyc: PWY-7979|Reactome: R-HSA-5173105 Amir_0636 7fd53cd3ac0e69a93f4cd8a83e1f4a54 523 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 125 258 3.1E-14 T 14-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 Amir_0032 c669ebb7c1667023d44aa3651fea79de 210 Gene3D G3DSA:1.10.357.10 18 203 3.0E-55 T 14-10-2018 Amir_0032 c669ebb7c1667023d44aa3651fea79de 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 69 3.0E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0032 c669ebb7c1667023d44aa3651fea79de 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 8.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0032 c669ebb7c1667023d44aa3651fea79de 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 8.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_0032 c669ebb7c1667023d44aa3651fea79de 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 35 66 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amir_0032 c669ebb7c1667023d44aa3651fea79de 210 SUPERFAMILY SSF46689 13 83 5.99E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_0778 f3c006d25f9f58b13148564b244cd751 115 Gene3D G3DSA:1.10.10.10 1 106 3.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0778 f3c006d25f9f58b13148564b244cd751 115 SUPERFAMILY SSF46785 2 105 1.05E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_0778 f3c006d25f9f58b13148564b244cd751 115 Pfam PF03551 Transcriptional regulator PadR-like family 14 86 1.6E-21 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal Amir_6251 8b6a1864f89c8a0e8f380f9361fff478 291 Pfam PF12679 ABC-2 family transporter protein 6 290 6.9E-7 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Amir_6629 147599b4dbd71ef5362126ff66fd4388 297 SUPERFAMILY SSF54427 196 288 6.48E-5 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_3872 d0fe05888ab29f10ffc556b69238789b 150 Pfam PF10002 Predicted membrane protein (DUF2243) 7 136 1.7E-40 T 14-10-2018 IPR018719 Protein of unknown function DUF2243, membrane Amir_6714 19cb9907682908ef22b6664392bf9c5f 266 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 27 243 8.7E-42 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Amir_1968 3fb23b6f402a7346909359bd1a600cd6 405 SUPERFAMILY SSF103473 12 396 8.5E-42 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_1968 3fb23b6f402a7346909359bd1a600cd6 405 Pfam PF05977 Transmembrane secretion effector 12 392 2.0E-23 T 14-10-2018 IPR010290 Transmembrane secretion effector Amir_1968 3fb23b6f402a7346909359bd1a600cd6 405 Gene3D G3DSA:1.20.1250.20 9 397 9.2E-35 T 14-10-2018 Amir_5009 c7abdbbcfbc7f9b8d6956b772d8b7097 158 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 26 98 6.7E-8 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amir_5009 c7abdbbcfbc7f9b8d6956b772d8b7097 158 SUPERFAMILY SSF55846 32 111 1.83E-10 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amir_5009 c7abdbbcfbc7f9b8d6956b772d8b7097 158 Gene3D G3DSA:3.40.80.10 13 117 1.2E-11 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amir_1890 e1fdfbdd5673e9bd806d34d4ca0b51fe 1104 Pfam PF13569 Domain of unknown function (DUF4132) 842 1020 8.8E-54 T 14-10-2018 IPR025406 Domain of unknown function DUF4132 Amir_1985 8f3363df82bb199fdb066c1db092d1da 229 SUPERFAMILY SSF81923 58 186 4.24E-19 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Amir_1985 8f3363df82bb199fdb066c1db092d1da 229 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 136 185 9.4E-15 T 14-10-2018 IPR004176 Clp, N-terminal Amir_1985 8f3363df82bb199fdb066c1db092d1da 229 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 65 111 1.2E-4 T 14-10-2018 IPR004176 Clp, N-terminal Amir_1985 8f3363df82bb199fdb066c1db092d1da 229 Gene3D G3DSA:1.10.1780.10 54 195 9.7E-30 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Amir_6061 c872002d131c4da34ad88d5cf4e05529 248 SUPERFAMILY SSF51161 34 219 7.19E-32 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Amir_6061 c872002d131c4da34ad88d5cf4e05529 248 Gene3D G3DSA:2.160.10.10 54 228 1.7E-33 T 14-10-2018 Amir_6061 c872002d131c4da34ad88d5cf4e05529 248 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 163 197 3.2E-8 T 14-10-2018 IPR001451 Hexapeptide repeat Amir_1869 f26668430680f10214ad58ecee89ab4e 384 Gene3D G3DSA:2.160.20.10 64 384 1.3E-7 T 14-10-2018 IPR012334 Pectin lyase fold Amir_1869 f26668430680f10214ad58ecee89ab4e 384 SMART SM00710 188 210 700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_1869 f26668430680f10214ad58ecee89ab4e 384 SMART SM00710 293 315 390.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_1869 f26668430680f10214ad58ecee89ab4e 384 SMART SM00710 135 157 350.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Amir_1869 f26668430680f10214ad58ecee89ab4e 384 SUPERFAMILY SSF51126 65 381 8.64E-15 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_1208 dc8076eb765697c5bbd93e1a6a87930f 267 Pfam PF01925 Sulfite exporter TauE/SafE 22 260 6.8E-35 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Amir_1477 31b0e68f76d9011038cb6e4beb970c48 321 SMART SM00382 29 212 1.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_1477 31b0e68f76d9011038cb6e4beb970c48 321 SUPERFAMILY SSF52540 4 226 6.71E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1477 31b0e68f76d9011038cb6e4beb970c48 321 Gene3D G3DSA:3.40.50.300 2 239 3.4E-65 T 14-10-2018 Amir_1477 31b0e68f76d9011038cb6e4beb970c48 321 TIGRFAM TIGR01188 drrA: daunorubicin resistance ABC transporter, ATP-binding protein 12 309 1.4E-103 T 14-10-2018 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA GO:0005524|GO:0043215|GO:1900753 Amir_1477 31b0e68f76d9011038cb6e4beb970c48 321 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_1477 31b0e68f76d9011038cb6e4beb970c48 321 Pfam PF00005 ABC transporter 20 163 1.0E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_0130 27dbbde2f487673966216e7747799348 265 Gene3D G3DSA:2.60.40.10 28 141 1.2E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_0130 27dbbde2f487673966216e7747799348 265 Pfam PF17210 SdrD B-like domain 32 96 2.5E-8 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Amir_0130 27dbbde2f487673966216e7747799348 265 SUPERFAMILY SSF117074 27 90 2.62E-8 T 14-10-2018 Amir_1374 a3d7aa7cfed61c41d4bb1e887f534cfa 270 SUPERFAMILY SSF46626 136 226 8.87E-28 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Amir_1374 a3d7aa7cfed61c41d4bb1e887f534cfa 270 SUPERFAMILY SSF46626 24 136 3.43E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Amir_1374 a3d7aa7cfed61c41d4bb1e887f534cfa 270 Gene3D G3DSA:1.10.760.10 13 135 4.6E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Amir_1374 a3d7aa7cfed61c41d4bb1e887f534cfa 270 Gene3D G3DSA:1.10.760.10 136 234 1.4E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Amir_1374 a3d7aa7cfed61c41d4bb1e887f534cfa 270 PIRSF PIRSF000007 1 270 6.7E-117 T 14-10-2018 IPR009152 Cytochrome bc1 complex, cytochrome c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Amir_1374 a3d7aa7cfed61c41d4bb1e887f534cfa 270 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 151 224 8.4E-13 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_1374 a3d7aa7cfed61c41d4bb1e887f534cfa 270 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 55 130 4.5E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_1999 314c519b4686e1e5e42856cfda13f6c0 424 Pfam PF07690 Major Facilitator Superfamily 246 399 2.3E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_1999 314c519b4686e1e5e42856cfda13f6c0 424 SUPERFAMILY SSF103473 8 401 2.09E-24 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_1999 314c519b4686e1e5e42856cfda13f6c0 424 Gene3D G3DSA:1.20.1250.20 11 181 1.6E-6 T 14-10-2018 Amir_1999 314c519b4686e1e5e42856cfda13f6c0 424 Gene3D G3DSA:1.20.1250.20 211 397 1.5E-14 T 14-10-2018 Amir_2754 b296024089531123d8232d0154e55cf9 465 SUPERFAMILY SSF103473 7 450 1.96E-87 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2754 b296024089531123d8232d0154e55cf9 465 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Amir_2754 b296024089531123d8232d0154e55cf9 465 Pfam PF00083 Sugar (and other) transporter 54 451 6.5E-47 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Amir_2754 b296024089531123d8232d0154e55cf9 465 Gene3D G3DSA:1.20.1250.20 13 453 1.4E-88 T 14-10-2018 Amir_5215 fea6e97df86091f3594eecc6210ca2fe 450 Gene3D G3DSA:3.50.30.30 109 230 2.0E-73 T 14-10-2018 Amir_5215 fea6e97df86091f3594eecc6210ca2fe 450 Gene3D G3DSA:3.40.630.10 71 435 2.0E-73 T 14-10-2018 Amir_5215 fea6e97df86091f3594eecc6210ca2fe 450 SUPERFAMILY SSF53187 48 448 5.24E-54 T 14-10-2018 Amir_5215 fea6e97df86091f3594eecc6210ca2fe 450 Pfam PF04389 Peptidase family M28 240 434 1.5E-35 T 14-10-2018 IPR007484 Peptidase M28 Amir_0819 b6ab26abd2e9115ea886a3d032b58036 186 Pfam PF03703 Bacterial PH domain 81 155 1.9E-14 T 14-10-2018 IPR005182 Domain of unknown function DUF304 Amir_5961 e654772778cc84b2df2a7a9fc88a9c3a 142 Gene3D G3DSA:1.10.10.10 9 142 2.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5961 e654772778cc84b2df2a7a9fc88a9c3a 142 SUPERFAMILY SSF46785 10 138 1.61E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5961 e654772778cc84b2df2a7a9fc88a9c3a 142 SMART SM00347 26 126 6.7E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_5961 e654772778cc84b2df2a7a9fc88a9c3a 142 Pfam PF01047 MarR family 33 90 6.9E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_5812 b8714e49bfce684ef2cc6b540b17d197 185 Pfam PF05534 HicB family 92 135 4.7E-7 T 14-10-2018 IPR008651 Uncharacterised protein family HicB Amir_5812 b8714e49bfce684ef2cc6b540b17d197 185 SUPERFAMILY SSF47598 100 144 9.45E-9 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Amir_2143 6c6bc2728b25003c882bc99edab31986 182 SUPERFAMILY SSF53448 10 178 2.05E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_2143 6c6bc2728b25003c882bc99edab31986 182 Gene3D G3DSA:3.90.550.10 10 182 1.1E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_2143 6c6bc2728b25003c882bc99edab31986 182 Pfam PF12804 MobA-like NTP transferase domain 11 157 3.7E-26 T 14-10-2018 IPR025877 MobA-like NTP transferase Amir_5708 36558f878d2669f0d5361aff6adbe5c1 257 Gene3D G3DSA:3.20.20.70 1 257 1.0E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_5708 36558f878d2669f0d5361aff6adbe5c1 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 257 6.2E-111 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Amir_5708 36558f878d2669f0d5361aff6adbe5c1 257 Pfam PF00977 Histidine biosynthesis protein 6 240 2.6E-84 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Amir_5708 36558f878d2669f0d5361aff6adbe5c1 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 257 47.254 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Amir_5708 36558f878d2669f0d5361aff6adbe5c1 257 SUPERFAMILY SSF51366 4 257 1.02E-78 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Amir_2805 8b672754dff34a47b0c842c63ad93251 258 SUPERFAMILY SSF52172 177 237 2.68E-6 T 14-10-2018 IPR011006 CheY-like superfamily Amir_2805 8b672754dff34a47b0c842c63ad93251 258 Pfam PF03861 ANTAR domain 186 238 1.4E-14 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_2805 8b672754dff34a47b0c842c63ad93251 258 SMART SM00065 34 182 1.2E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2805 8b672754dff34a47b0c842c63ad93251 258 PIRSF PIRSF036625 2 250 2.0E-54 T 14-10-2018 IPR012074 GAF-ANTAR transcription anti-termination regulator, putative Amir_2805 8b672754dff34a47b0c842c63ad93251 258 SUPERFAMILY SSF55781 37 180 2.4E-18 T 14-10-2018 Amir_2805 8b672754dff34a47b0c842c63ad93251 258 Gene3D G3DSA:3.30.450.40 11 183 1.6E-20 T 14-10-2018 IPR029016 GAF-like domain superfamily Amir_2805 8b672754dff34a47b0c842c63ad93251 258 Gene3D G3DSA:1.10.10.10 186 242 3.8E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_2805 8b672754dff34a47b0c842c63ad93251 258 Pfam PF13185 GAF domain 37 171 2.3E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 Amir_2805 8b672754dff34a47b0c842c63ad93251 258 SMART SM01012 184 239 4.3E-16 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_6793 56fc8d25b8968e0a97f66a1c9916eea1 70 Gene3D G3DSA:1.10.10.10 21 67 4.3E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_6793 56fc8d25b8968e0a97f66a1c9916eea1 70 Pfam PF08279 HTH domain 37 64 2.0E-4 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Amir_2972 63ee62fe267e50219e202a3fa69250a7 245 Pfam PF01261 Xylose isomerase-like TIM barrel 45 200 1.4E-15 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Amir_2972 63ee62fe267e50219e202a3fa69250a7 245 Gene3D G3DSA:3.20.20.150 1 240 1.5E-52 T 14-10-2018 Amir_2972 63ee62fe267e50219e202a3fa69250a7 245 SUPERFAMILY SSF51658 8 237 5.91E-30 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Amir_5212 07f03d084732993239ead43270530e78 317 Pfam PF08279 HTH domain 7 62 4.4E-12 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Amir_5212 07f03d084732993239ead43270530e78 317 Gene3D G3DSA:1.10.10.10 1 65 5.1E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5212 07f03d084732993239ead43270530e78 317 SUPERFAMILY SSF46785 5 63 3.24E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_5212 07f03d084732993239ead43270530e78 317 Pfam PF13280 WYL domain 142 310 7.6E-23 T 14-10-2018 IPR026881 WYL domain Amir_5212 07f03d084732993239ead43270530e78 317 PIRSF PIRSF016838 2 314 3.0E-17 T 14-10-2018 IPR028349 Protein PafC Amir_0482 a76a6aacf5470448fdbab771f48b592d 161 Pfam PF10969 Protein of unknown function (DUF2771) 19 136 8.3E-20 T 14-10-2018 IPR024495 Protein of unknown function DUF2771 Amir_0482 a76a6aacf5470448fdbab771f48b592d 161 ProDom PD034580 PRECURSOR SIGNAL EXPORTED MB0899C RV0875C/MT0898 MLCB57.27C POSSIBLE 24 87 3.0E-7 T 14-10-2018 IPR024495 Protein of unknown function DUF2771 Amir_1125 f3a37ad4aeb93493e1f38f9485cd1119 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1125 f3a37ad4aeb93493e1f38f9485cd1119 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 1.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_1125 f3a37ad4aeb93493e1f38f9485cd1119 210 Gene3D G3DSA:1.10.357.10 4 206 6.4E-21 T 14-10-2018 Amir_1125 f3a37ad4aeb93493e1f38f9485cd1119 210 SUPERFAMILY SSF46689 10 74 1.18E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_1125 f3a37ad4aeb93493e1f38f9485cd1119 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 69 3.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2772 0a5d56cd6a6fea00b3225dd34b4a0efe 181 Pfam PF07884 Vitamin K epoxide reductase family 9 139 1.2E-29 T 14-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 Amir_2772 0a5d56cd6a6fea00b3225dd34b4a0efe 181 SMART SM00756 2 143 2.0E-49 T 14-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 Amir_2772 0a5d56cd6a6fea00b3225dd34b4a0efe 181 Gene3D G3DSA:1.20.1440.130 1 174 1.5E-18 T 14-10-2018 IPR038354 VKOR domain superfamily Reactome: R-HSA-6806664 Amir_2605 2fb563dce05110c7309a91adb8709d9f 338 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 224 1.7E-23 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amir_2605 2fb563dce05110c7309a91adb8709d9f 338 Gene3D G3DSA:3.40.50.720 1 323 1.5E-49 T 14-10-2018 Amir_2605 2fb563dce05110c7309a91adb8709d9f 338 SUPERFAMILY SSF51735 1 319 1.3E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4439 1029aeb1499d8b632843d28b2b72dfe2 304 PRINTS PR00691 Adhesin B signature 76 95 1.7E-27 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Amir_4439 1029aeb1499d8b632843d28b2b72dfe2 304 PRINTS PR00691 Adhesin B signature 186 203 1.7E-27 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Amir_4439 1029aeb1499d8b632843d28b2b72dfe2 304 PRINTS PR00691 Adhesin B signature 212 230 1.7E-27 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Amir_4439 1029aeb1499d8b632843d28b2b72dfe2 304 PRINTS PR00691 Adhesin B signature 235 252 1.7E-27 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Amir_4439 1029aeb1499d8b632843d28b2b72dfe2 304 PRINTS PR00691 Adhesin B signature 32 53 1.7E-27 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Amir_4439 1029aeb1499d8b632843d28b2b72dfe2 304 PRINTS PR00691 Adhesin B signature 57 75 1.7E-27 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Amir_4439 1029aeb1499d8b632843d28b2b72dfe2 304 Gene3D G3DSA:3.40.50.1980 32 187 1.6E-42 T 14-10-2018 Amir_4439 1029aeb1499d8b632843d28b2b72dfe2 304 Gene3D G3DSA:3.40.50.1980 188 299 2.4E-38 T 14-10-2018 Amir_4439 1029aeb1499d8b632843d28b2b72dfe2 304 SUPERFAMILY SSF53807 29 300 6.38E-77 T 14-10-2018 Amir_4439 1029aeb1499d8b632843d28b2b72dfe2 304 PRINTS PR00690 Adhesin family signature 265 284 1.1E-35 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amir_4439 1029aeb1499d8b632843d28b2b72dfe2 304 PRINTS PR00690 Adhesin family signature 63 76 1.1E-35 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amir_4439 1029aeb1499d8b632843d28b2b72dfe2 304 PRINTS PR00690 Adhesin family signature 32 50 1.1E-35 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amir_4439 1029aeb1499d8b632843d28b2b72dfe2 304 PRINTS PR00690 Adhesin family signature 239 257 1.1E-35 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amir_4439 1029aeb1499d8b632843d28b2b72dfe2 304 PRINTS PR00690 Adhesin family signature 76 93 1.1E-35 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amir_4439 1029aeb1499d8b632843d28b2b72dfe2 304 PRINTS PR00690 Adhesin family signature 186 207 1.1E-35 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amir_4439 1029aeb1499d8b632843d28b2b72dfe2 304 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 297 2.6E-63 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Amir_0169 b12705d9943c6b461ff5fce096246774 411 PIRSF PIRSF005962 18 411 3.4E-109 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Amir_0169 b12705d9943c6b461ff5fce096246774 411 SUPERFAMILY SSF55031 203 316 2.62E-31 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amir_0169 b12705d9943c6b461ff5fce096246774 411 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 32 397 3.2E-98 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Amir_0169 b12705d9943c6b461ff5fce096246774 411 Gene3D G3DSA:3.40.630.10 32 395 5.9E-128 T 14-10-2018 Amir_0169 b12705d9943c6b461ff5fce096246774 411 Gene3D G3DSA:3.30.70.360 201 315 5.9E-128 T 14-10-2018 Amir_0169 b12705d9943c6b461ff5fce096246774 411 SUPERFAMILY SSF53187 21 410 1.85E-70 T 14-10-2018 Amir_0169 b12705d9943c6b461ff5fce096246774 411 Pfam PF07687 Peptidase dimerisation domain 205 302 1.5E-11 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Amir_0169 b12705d9943c6b461ff5fce096246774 411 Pfam PF01546 Peptidase family M20/M25/M40 89 406 7.6E-26 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Amir_3935 a29a9f5ec4c6e7bb7520691b07f04155 405 Gene3D G3DSA:1.20.1250.20 26 393 2.9E-13 T 14-10-2018 Amir_3935 a29a9f5ec4c6e7bb7520691b07f04155 405 SUPERFAMILY SSF103473 19 393 4.19E-20 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_3430 99e32f7dbc74c0b1836ef658f4f54a5c 296 Pfam PF13576 Pentapeptide repeats (9 copies) 220 266 6.8E-10 T 14-10-2018 IPR001646 Pentapeptide repeat Amir_3430 99e32f7dbc74c0b1836ef658f4f54a5c 296 Pfam PF13576 Pentapeptide repeats (9 copies) 154 200 7.0E-9 T 14-10-2018 IPR001646 Pentapeptide repeat Amir_3430 99e32f7dbc74c0b1836ef658f4f54a5c 296 SUPERFAMILY SSF141571 135 246 3.27E-6 T 14-10-2018 Amir_3430 99e32f7dbc74c0b1836ef658f4f54a5c 296 Gene3D G3DSA:2.160.20.100 129 292 2.1E-10 T 14-10-2018 Amir_6715 5e63bc0b70a47fc2c223abc30a1bb650 353 Gene3D G3DSA:3.40.390.10 62 311 3.4E-60 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Amir_6715 5e63bc0b70a47fc2c223abc30a1bb650 353 Pfam PF09471 IgA Peptidase M64 67 304 5.6E-57 T 14-10-2018 IPR019026 Peptidase M64, IgA Amir_4606 e863c79a68e4ba74759caee2826cce78 531 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 200 215 - T 14-10-2018 IPR019826 Carboxylesterase type B, active site Amir_4606 e863c79a68e4ba74759caee2826cce78 531 Gene3D G3DSA:3.40.50.1820 31 522 1.6E-142 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4606 e863c79a68e4ba74759caee2826cce78 531 SUPERFAMILY SSF53474 33 521 8.82E-121 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4606 e863c79a68e4ba74759caee2826cce78 531 Pfam PF00135 Carboxylesterase family 32 518 7.3E-115 T 14-10-2018 IPR002018 Carboxylesterase, type B Amir_4378 1b8829cdc0dd94e45846224dcab51e17 242 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.4E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4378 1b8829cdc0dd94e45846224dcab51e17 242 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 2.4E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4378 1b8829cdc0dd94e45846224dcab51e17 242 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.4E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4378 1b8829cdc0dd94e45846224dcab51e17 242 Pfam PF13411 MerR HTH family regulatory protein 4 70 1.2E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4378 1b8829cdc0dd94e45846224dcab51e17 242 SMART SM00422 3 72 2.5E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amir_4378 1b8829cdc0dd94e45846224dcab51e17 242 SUPERFAMILY SSF46955 4 101 7.69E-22 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Amir_6779 c9760d7759ccafa871675befea152e26 142 Pfam PF13453 Transcription factor zinc-finger 1 32 1.4E-11 T 14-10-2018 IPR027392 Transcription factor zinc-finger Amir_3031 8ecc54b067704a0a791f0baec4806d4e 130 Pfam PF00583 Acetyltransferase (GNAT) family 22 120 3.9E-10 T 14-10-2018 IPR000182 GNAT domain Amir_3031 8ecc54b067704a0a791f0baec4806d4e 130 Gene3D G3DSA:3.40.630.30 2 127 1.2E-16 T 14-10-2018 Amir_3031 8ecc54b067704a0a791f0baec4806d4e 130 SUPERFAMILY SSF55729 17 123 2.53E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_2591 c7b7f19b098085f4034b887648625f1e 80 SUPERFAMILY SSF54736 6 76 5.02E-7 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Amir_2591 c7b7f19b098085f4034b887648625f1e 80 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 7 73 9.2E-5 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 Amir_0177 5bf3cb00449f6a8a038d8d520a9af8fe 731 Gene3D G3DSA:3.40.50.300 354 617 2.5E-35 T 14-10-2018 Amir_0177 5bf3cb00449f6a8a038d8d520a9af8fe 731 SUPERFAMILY SSF52540 357 584 3.98E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_4418 d0551fc05e790d6f30ef9629dcbae6df 224 Pfam PF00117 Glutamine amidotransferase class-I 17 178 3.9E-14 T 14-10-2018 IPR017926 Glutamine amidotransferase Amir_4418 d0551fc05e790d6f30ef9629dcbae6df 224 Gene3D G3DSA:3.40.50.880 2 224 1.4E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_4418 d0551fc05e790d6f30ef9629dcbae6df 224 SUPERFAMILY SSF52317 2 186 7.78E-40 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_6652 59286dddafef4f589bed201029205735 307 Pfam PF13391 HNH endonuclease 211 260 1.3E-5 T 14-10-2018 IPR003615 HNH nuclease Amir_0204 12994de49084aae2e4442ce080e001ab 156 SUPERFAMILY SSF52540 3 135 1.92E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0204 12994de49084aae2e4442ce080e001ab 156 Gene3D G3DSA:3.40.50.300 1 155 2.9E-22 T 14-10-2018 Amir_6752 555f02c17ffc025fcc6dae17525f1fcf 211 SUPERFAMILY SSF46894 158 211 1.6E-6 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amir_6752 555f02c17ffc025fcc6dae17525f1fcf 211 Gene3D G3DSA:1.10.10.10 32 211 4.3E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0498 44b45720524e7763447dd100b6f493d4 575 Gene3D G3DSA:3.40.50.1820 317 575 3.1E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0498 44b45720524e7763447dd100b6f493d4 575 SUPERFAMILY SSF53474 326 573 9.89E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0498 44b45720524e7763447dd100b6f493d4 575 Pfam PF00326 Prolyl oligopeptidase family 379 573 1.0E-42 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Amir_3381 bad78392b984a20814725e7d07791aec 337 Gene3D G3DSA:2.115.10.20 197 333 2.7E-10 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3381 bad78392b984a20814725e7d07791aec 337 Gene3D G3DSA:2.115.10.20 76 195 7.9E-16 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_3381 bad78392b984a20814725e7d07791aec 337 SUPERFAMILY SSF75005 43 263 1.07E-20 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amir_0108 0d2d4886f700a37759a1d5bdd6af79e4 61 Pfam PF04149 Domain of unknown function (DUF397) 3 54 1.0E-17 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_3475 9654a67542060a78717aa69e30819b7a 405 Gene3D G3DSA:1.10.443.10 192 389 2.6E-33 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amir_3475 9654a67542060a78717aa69e30819b7a 405 Pfam PF00589 Phage integrase family 196 382 1.5E-22 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amir_3475 9654a67542060a78717aa69e30819b7a 405 SUPERFAMILY SSF56349 125 390 5.0E-35 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amir_3475 9654a67542060a78717aa69e30819b7a 405 Gene3D G3DSA:1.10.150.130 104 172 1.1E-7 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Amir_1901 1938a2a9c527f136210c1478fb7a6835 90 Pfam PF04226 Transglycosylase associated protein 33 82 4.5E-10 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 Amir_0567 1a4800b9a42560d20be2f6778ff5d641 95 Pfam PF04149 Domain of unknown function (DUF397) 35 86 3.0E-18 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_3850 667d3956e5d83cff44fe226f36c0852e 79 SUPERFAMILY SSF56112 16 59 1.87E-5 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_3850 667d3956e5d83cff44fe226f36c0852e 79 Gene3D G3DSA:3.90.1200.10 11 77 3.8E-9 T 14-10-2018 Amir_1010 7fbc94b083f615b23f0a8cd1e9d12c18 90 Gene3D G3DSA:3.10.20.30 1 90 1.4E-28 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Amir_1010 7fbc94b083f615b23f0a8cd1e9d12c18 90 SUPERFAMILY SSF54285 1 90 1.89E-25 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Amir_1010 7fbc94b083f615b23f0a8cd1e9d12c18 90 TIGRFAM TIGR01687 moaD_arch: MoaD family protein 10 90 1.3E-14 T 14-10-2018 IPR010038 MoaD, archaeal-type Amir_1010 7fbc94b083f615b23f0a8cd1e9d12c18 90 Pfam PF02597 ThiS family 5 90 2.5E-20 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Amir_1461 0b84a61536ae31574cf00dc0cabafd97 336 Pfam PF13830 Domain of unknown function (DUF4192) 14 321 1.2E-75 T 14-10-2018 IPR025447 Protein of unknown function DUF4192 Amir_0414 d879abfccf07958751fe31b4c17fcf5b 284 SUPERFAMILY SSF47413 13 72 1.18E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_0414 d879abfccf07958751fe31b4c17fcf5b 284 Pfam PF13560 Helix-turn-helix domain 17 76 1.6E-11 T 14-10-2018 Amir_0414 d879abfccf07958751fe31b4c17fcf5b 284 SMART SM00530 20 75 1.7E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_0414 d879abfccf07958751fe31b4c17fcf5b 284 Gene3D G3DSA:1.10.260.40 5 74 7.5E-8 T 14-10-2018 Amir_0941 708aa962eea1f86ba821f7f92007a1ea 1001 Pfam PF03699 Uncharacterised protein family (UPF0182) 21 831 8.5E-268 T 14-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 Amir_0941 708aa962eea1f86ba821f7f92007a1ea 1001 Hamap MF_01600 UPF0182 protein . 11 908 17.802 T 14-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 Amir_0015 1ca8c0447920fa319254161d10d5f478 140 Pfam PF10756 Bacterial PH domain 61 139 4.1E-12 T 14-10-2018 IPR019692 Protein of unknown function DUF2581 Amir_4072 3d506be94c451b52c601f1847a01470b 424 Pfam PF12704 MacB-like periplasmic core domain 54 268 2.0E-10 T 14-10-2018 IPR025857 MacB-like periplasmic core domain Amir_4072 3d506be94c451b52c601f1847a01470b 424 Pfam PF02687 FtsX-like permease family 329 417 3.0E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amir_0352 4a715eb6eff0d002b9936d504d60ba95 296 Pfam PF01297 Zinc-uptake complex component A periplasmic 40 291 1.4E-44 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Amir_0352 4a715eb6eff0d002b9936d504d60ba95 296 Gene3D G3DSA:3.40.50.1980 39 180 1.7E-31 T 14-10-2018 Amir_0352 4a715eb6eff0d002b9936d504d60ba95 296 SUPERFAMILY SSF53807 36 294 1.91E-50 T 14-10-2018 Amir_2721 5243e02d96b4fced6dc7a3d5ff82768f 338 SUPERFAMILY SSF81345 12 333 7.45E-63 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_2721 5243e02d96b4fced6dc7a3d5ff82768f 338 Pfam PF01032 FecCD transport family 31 333 3.3E-68 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_2721 5243e02d96b4fced6dc7a3d5ff82768f 338 Gene3D G3DSA:1.10.3470.10 11 336 6.7E-74 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_3713 2c1c4f761f9f41c2f07cc4a4ca8b369b 158 Pfam PF13787 Protein of unknown function with HXXEE motif 14 119 6.8E-17 T 14-10-2018 IPR025671 Protein of unknown function with HXXEE motif Amir_3980 4f63af1026b00d794076001df8c5d689 235 Gene3D G3DSA:3.40.50.10990 15 193 4.3E-60 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Amir_3980 4f63af1026b00d794076001df8c5d689 235 SUPERFAMILY SSF142695 14 191 1.29E-53 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Amir_3980 4f63af1026b00d794076001df8c5d689 235 Pfam PF00925 GTP cyclohydrolase II 23 190 2.3E-59 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Amir_3980 4f63af1026b00d794076001df8c5d689 235 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 13 216 34.851 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Amir_4638 3907acea7ffc42ff2d84f43b896211d6 165 Pfam PF12802 MarR family 40 99 4.8E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_4638 3907acea7ffc42ff2d84f43b896211d6 165 Gene3D G3DSA:1.10.10.10 8 157 3.0E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4638 3907acea7ffc42ff2d84f43b896211d6 165 SUPERFAMILY SSF46785 6 150 4.14E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4638 3907acea7ffc42ff2d84f43b896211d6 165 SMART SM00347 33 136 9.3E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_2235 ca56c0b1b599e80b7947b5210cf9ddbc 255 Pfam PF12730 ABC-2 family transporter protein 4 173 4.7E-9 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Amir_4953 b216221c151014339348cccc0497a397 312 Gene3D G3DSA:3.40.630.10 32 312 1.1E-82 T 14-10-2018 Amir_4953 b216221c151014339348cccc0497a397 312 Pfam PF04389 Peptidase family M28 97 304 7.5E-47 T 14-10-2018 IPR007484 Peptidase M28 Amir_4953 b216221c151014339348cccc0497a397 312 SUPERFAMILY SSF53187 40 311 1.64E-69 T 14-10-2018 Amir_5752 98e74698f9c83704cf11d8b6be360db0 90 Hamap MF_00634 UPF0235 protein YggU [yggU]. 1 86 16.585 T 14-10-2018 IPR003746 Protein of unknown function DUF167 Amir_5752 98e74698f9c83704cf11d8b6be360db0 90 Gene3D G3DSA:3.30.1200.10 1 87 8.1E-24 T 14-10-2018 IPR036591 YggU-like superfamily Amir_5752 98e74698f9c83704cf11d8b6be360db0 90 SUPERFAMILY SSF69786 3 78 6.41E-23 T 14-10-2018 IPR036591 YggU-like superfamily Amir_5752 98e74698f9c83704cf11d8b6be360db0 90 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 3 73 3.5E-26 T 14-10-2018 IPR003746 Protein of unknown function DUF167 Amir_5752 98e74698f9c83704cf11d8b6be360db0 90 SMART SM01152 1 75 2.7E-28 T 14-10-2018 IPR003746 Protein of unknown function DUF167 Amir_4493 ac7048835e03920b4be704117a9e371b 255 Pfam PF00975 Thioesterase domain 21 237 4.1E-23 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 Amir_4493 ac7048835e03920b4be704117a9e371b 255 Gene3D G3DSA:3.40.50.1820 18 244 6.0E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4493 ac7048835e03920b4be704117a9e371b 255 SUPERFAMILY SSF53474 5 239 3.53E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5369 fcd01ae047a848c983b9dd9103820d37 239 Gene3D G3DSA:1.10.10.1320 9 66 1.1E-15 T 14-10-2018 Amir_5369 fcd01ae047a848c983b9dd9103820d37 239 Pfam PF13490 Putative zinc-finger 12 41 1.4E-8 T 14-10-2018 IPR027383 Putative zinc-finger Amir_1260 bb210eea07fa2362cd469fcf81645cee 247 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 22 245 2.8E-52 T 14-10-2018 IPR015402 Protein of unknown function DUF1980 Amir_1260 bb210eea07fa2362cd469fcf81645cee 247 Pfam PF09323 Domain of unknown function (DUF1980) 8 113 3.6E-12 T 14-10-2018 IPR015402 Protein of unknown function DUF1980 Amir_4251 0fe6c1d47bfff2fb8547f3b277113b0b 447 Pfam PF00106 short chain dehydrogenase 134 225 7.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4251 0fe6c1d47bfff2fb8547f3b277113b0b 447 SUPERFAMILY SSF51735 128 424 3.57E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4251 0fe6c1d47bfff2fb8547f3b277113b0b 447 Gene3D G3DSA:3.40.50.720 119 238 2.8E-18 T 14-10-2018 Amir_4251 0fe6c1d47bfff2fb8547f3b277113b0b 447 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 285 392 8.1E-7 T 14-10-2018 Amir_4251 0fe6c1d47bfff2fb8547f3b277113b0b 447 Gene3D G3DSA:3.40.50.720 280 441 5.2E-16 T 14-10-2018 Amir_4251 0fe6c1d47bfff2fb8547f3b277113b0b 447 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 358 377 4.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4251 0fe6c1d47bfff2fb8547f3b277113b0b 447 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 150 4.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4251 0fe6c1d47bfff2fb8547f3b277113b0b 447 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 221 4.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4132 bbd46fdb723b46c57a8294ec4816a233 407 Pfam PF13378 Enolase C-terminal domain-like 141 382 6.0E-42 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Amir_4132 bbd46fdb723b46c57a8294ec4816a233 407 SUPERFAMILY SSF54826 8 112 1.39E-31 T 14-10-2018 Amir_4132 bbd46fdb723b46c57a8294ec4816a233 407 SMART SM00922 129 262 2.3E-17 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Amir_4132 bbd46fdb723b46c57a8294ec4816a233 407 Gene3D G3DSA:3.20.20.120 105 373 7.0E-156 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_4132 bbd46fdb723b46c57a8294ec4816a233 407 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 14 110 7.9E-31 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Amir_4132 bbd46fdb723b46c57a8294ec4816a233 407 SUPERFAMILY SSF51604 98 390 3.54E-69 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amir_4132 bbd46fdb723b46c57a8294ec4816a233 407 Gene3D G3DSA:3.30.390.10 4 404 7.0E-156 T 14-10-2018 IPR029017 Enolase-like, N-terminal Amir_1259 1187ad150c063919e642b5f4a9cff672 334 Pfam PF03773 Predicted permease 53 329 4.4E-52 T 14-10-2018 IPR005524 Predicted permease DUF318 Amir_3799 095ef47660b20eb009b2799b443e3a42 143 SUPERFAMILY SSF46785 3 135 8.86E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_3799 095ef47660b20eb009b2799b443e3a42 143 Gene3D G3DSA:1.10.10.10 1 141 2.2E-46 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3799 095ef47660b20eb009b2799b443e3a42 143 Pfam PF01638 HxlR-like helix-turn-helix 14 100 3.5E-26 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type Amir_0937 1206b265c5adbe4ecdfc648e4f83a705 175 Gene3D G3DSA:3.30.2010.10 75 160 5.0E-14 T 14-10-2018 Amir_0937 1206b265c5adbe4ecdfc648e4f83a705 175 Pfam PF01863 Protein of unknown function DUF45 83 150 6.1E-21 T 14-10-2018 IPR002725 Protein of unknown function DUF45 Amir_6632 16e1b6a10568a137d7aabfb39f184708 328 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 82 255 1.3E-41 T 14-10-2018 IPR005693 Virulence factor Mce protein Amir_6632 16e1b6a10568a137d7aabfb39f184708 328 Pfam PF02470 MlaD protein 86 163 1.7E-13 T 14-10-2018 IPR003399 Mce/MlaD Amir_1016 8debb69458aa890509194e515730f1e0 270 Pfam PF12706 Beta-lactamase superfamily domain 49 224 2.4E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_1016 8debb69458aa890509194e515730f1e0 270 SUPERFAMILY SSF56281 3 255 1.62E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_1016 8debb69458aa890509194e515730f1e0 270 SMART SM00849 18 194 0.007 T 14-10-2018 IPR001279 Metallo-beta-lactamase Amir_1016 8debb69458aa890509194e515730f1e0 270 Gene3D G3DSA:3.60.15.10 1 257 2.4E-71 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amir_1844 27110b67adde5b2c9455ec8580693aca 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 284 2.6E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_1844 27110b67adde5b2c9455ec8580693aca 291 SUPERFAMILY SSF161098 51 279 1.01E-55 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1844 27110b67adde5b2c9455ec8580693aca 291 Gene3D G3DSA:1.10.3720.10 47 288 4.6E-65 T 14-10-2018 IPR035906 MetI-like superfamily Amir_5497 30efbc44f3e28db18aa9e775d59a56cc 214 SUPERFAMILY SSF55729 1 186 6.45E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_5497 30efbc44f3e28db18aa9e775d59a56cc 214 Gene3D G3DSA:3.40.630.30 2 206 1.3E-63 T 14-10-2018 Amir_5497 30efbc44f3e28db18aa9e775d59a56cc 214 Pfam PF00583 Acetyltransferase (GNAT) family 49 183 1.8E-10 T 14-10-2018 IPR000182 GNAT domain Amir_0749 0d3b022cf2e8c9af1049b670a9f89c92 288 Pfam PF12679 ABC-2 family transporter protein 91 283 7.4E-11 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Amir_1207 e21f5aeb07054990faf72e623a1a5d82 86 Pfam PF01649 Ribosomal protein S20 2 84 7.5E-28 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_1207 e21f5aeb07054990faf72e623a1a5d82 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 84 3.0E-24 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_1207 e21f5aeb07054990faf72e623a1a5d82 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 86 8.0E-24 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_1207 e21f5aeb07054990faf72e623a1a5d82 86 Gene3D G3DSA:1.20.58.110 1 86 2.4E-29 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_1207 e21f5aeb07054990faf72e623a1a5d82 86 SUPERFAMILY SSF46992 3 86 2.62E-28 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_1207 e21f5aeb07054990faf72e623a1a5d82 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.483 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amir_6995 055b5bdae86154708a7b193d6ad5e0de 276 Pfam PF13845 Septum formation 52 254 1.3E-38 T 14-10-2018 IPR026004 Septum formation-related domain Amir_4809 e9e9774f598f1da79f91f7f758718ebb 219 SUPERFAMILY SSF52980 90 199 3.49E-23 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Amir_4809 e9e9774f598f1da79f91f7f758718ebb 219 Gene3D G3DSA:3.40.1350.10 84 203 1.7E-8 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Amir_4809 e9e9774f598f1da79f91f7f758718ebb 219 Pfam PF04471 Restriction endonuclease 86 198 1.0E-28 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 Amir_2475 e097d0ee5f5a6528e0e0356e8d96f903 223 Gene3D G3DSA:2.70.50.50 38 223 8.7E-62 T 14-10-2018 Amir_2475 e097d0ee5f5a6528e0e0356e8d96f903 223 SUPERFAMILY SSF81296 38 222 4.76E-30 T 14-10-2018 IPR014756 Immunoglobulin E-set Amir_2475 e097d0ee5f5a6528e0e0356e8d96f903 223 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 38 220 1.2E-31 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal Amir_6901 6ccd10ae37486e2024d678c0f973be44 200 Pfam PF12079 Protein of unknown function (DUF3558) 17 194 2.2E-27 T 14-10-2018 IPR024520 Protein of unknown function DUF3558 Amir_3151 69b35fd45b45482f09517ec98f9579b8 381 PRINTS PR00758 Arsenical pump membrane protein signature 84 108 1.2E-5 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Amir_3151 69b35fd45b45482f09517ec98f9579b8 381 PRINTS PR00758 Arsenical pump membrane protein signature 248 272 1.2E-5 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Amir_3151 69b35fd45b45482f09517ec98f9579b8 381 Pfam PF02040 Arsenical pump membrane protein 43 371 9.2E-19 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Amir_4814 41a065bedc8d1e09154238e542b6bbc7 133 Pfam PF05331 Protein of unknown function (DUF742) 9 133 1.0E-30 T 14-10-2018 IPR007995 Protein of unknown function DUF742 Amir_2587 4c9457694355f33238684600d42de800 486 Pfam PF03929 PepSY-associated TM region 36 389 1.9E-67 T 14-10-2018 IPR005625 PepSY-associated TM protein Amir_4652 b196db3d82ee8d11ec7280d1122597f0 321 Pfam PF07859 alpha/beta hydrolase fold 89 294 2.2E-59 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 Amir_4652 b196db3d82ee8d11ec7280d1122597f0 321 SUPERFAMILY SSF53474 51 318 1.52E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_4652 b196db3d82ee8d11ec7280d1122597f0 321 Gene3D G3DSA:3.40.50.1820 9 320 1.3E-80 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1584 133be95a3a12b76f0cc91334b0b17185 272 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 47 259 1.8E-19 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amir_1584 133be95a3a12b76f0cc91334b0b17185 272 Gene3D G3DSA:3.40.50.1110 44 267 2.9E-59 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Amir_1584 133be95a3a12b76f0cc91334b0b17185 272 SUPERFAMILY SSF52266 46 268 7.66E-52 T 14-10-2018 Amir_6566 307bca24804f5a73671161d27ec0ccad 96 SUPERFAMILY SSF140453 3 96 6.54E-25 T 14-10-2018 IPR036689 ESAT-6-like superfamily Amir_6566 307bca24804f5a73671161d27ec0ccad 96 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 4 92 2.1E-23 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like Amir_6566 307bca24804f5a73671161d27ec0ccad 96 Gene3D G3DSA:1.10.287.1060 1 96 2.8E-28 T 14-10-2018 Amir_6566 307bca24804f5a73671161d27ec0ccad 96 ProDom PD020150 ESAT-6-LIKE ANTIGEN ESXR CFP7 LOW WEIGHT ESXQ CFP-7 TB10.4 MOLECULAR 4 96 4.0E-4 T 14-10-2018 Amir_6566 307bca24804f5a73671161d27ec0ccad 96 Pfam PF06013 Proteins of 100 residues with WXG 4 89 8.3E-19 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like Amir_2157 e0ef8f87efdd430cbd616e7af3d9fa95 359 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 11 289 1.1E-51 T 14-10-2018 IPR005693 Virulence factor Mce protein Amir_2157 e0ef8f87efdd430cbd616e7af3d9fa95 359 Pfam PF02470 MlaD protein 37 111 2.1E-11 T 14-10-2018 IPR003399 Mce/MlaD Amir_2157 e0ef8f87efdd430cbd616e7af3d9fa95 359 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 142 339 6.0E-49 T 14-10-2018 IPR024516 Mammalian cell entry, C-terminal Amir_2447 9a8fdcdd669a261345633457982a109e 321 SUPERFAMILY SSF103481 195 289 1.96E-11 T 14-10-2018 Amir_2447 9a8fdcdd669a261345633457982a109e 321 Pfam PF00892 EamA-like transporter family 11 140 8.2E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amir_2447 9a8fdcdd669a261345633457982a109e 321 Pfam PF00892 EamA-like transporter family 157 284 2.9E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amir_2447 9a8fdcdd669a261345633457982a109e 321 SUPERFAMILY SSF103481 40 141 4.32E-10 T 14-10-2018 Amir_1054 4211d624326723eb5281bb994af5eb64 400 Pfam PF03734 L,D-transpeptidase catalytic domain 257 370 9.3E-16 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Amir_1054 4211d624326723eb5281bb994af5eb64 400 Gene3D G3DSA:2.60.40.3780 48 144 1.1E-25 T 14-10-2018 Amir_1054 4211d624326723eb5281bb994af5eb64 400 Gene3D G3DSA:2.40.440.10 245 385 1.9E-96 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Amir_1054 4211d624326723eb5281bb994af5eb64 400 Gene3D G3DSA:2.60.40.3710 153 397 1.9E-96 T 14-10-2018 Amir_1054 4211d624326723eb5281bb994af5eb64 400 SUPERFAMILY SSF141523 252 370 9.94E-28 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Amir_5865 aee97f17df99025d81ce5fd7f4ba09bf 150 Gene3D G3DSA:3.40.630.30 8 148 2.3E-38 T 14-10-2018 Amir_5865 aee97f17df99025d81ce5fd7f4ba09bf 150 Pfam PF13673 Acetyltransferase (GNAT) domain 50 147 2.3E-13 T 14-10-2018 IPR000182 GNAT domain Amir_5865 aee97f17df99025d81ce5fd7f4ba09bf 150 SUPERFAMILY SSF55729 15 148 4.51E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_1746 3caa5a65ef7988dab54f9d93248d6c62 509 Pfam PF13440 Polysaccharide biosynthesis protein 66 357 1.2E-73 T 14-10-2018 Amir_4801 efe4e741ba51977609b379be3fbae621 256 Pfam PF09335 SNARE associated Golgi protein 34 151 2.7E-12 T 14-10-2018 IPR032816 SNARE associated Golgi protein Amir_0035 dd634b3be6c4611b27944b365f97527a 255 Pfam PF00106 short chain dehydrogenase 3 183 1.3E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0035 dd634b3be6c4611b27944b365f97527a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.4E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0035 dd634b3be6c4611b27944b365f97527a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.4E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0035 dd634b3be6c4611b27944b365f97527a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.4E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0035 dd634b3be6c4611b27944b365f97527a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.4E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0035 dd634b3be6c4611b27944b365f97527a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.4E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0035 dd634b3be6c4611b27944b365f97527a 255 Gene3D G3DSA:3.40.50.720 3 244 1.2E-56 T 14-10-2018 Amir_0035 dd634b3be6c4611b27944b365f97527a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 2.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0035 dd634b3be6c4611b27944b365f97527a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 2.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_0035 dd634b3be6c4611b27944b365f97527a 255 SUPERFAMILY SSF51735 2 248 5.13E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_3058 e9e49aec31c3be94084b02492f0228af 120 Pfam PF02656 Domain of unknown function (DUF202) 20 84 5.4E-14 T 14-10-2018 IPR003807 Domain of unknown function DUF202 Amir_6778 a50887b188a1403627111ff54470d230 670 SUPERFAMILY SSF52540 115 246 3.64E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3561 e128ba59c0feadb126b0a510ffe551b4 340 Gene3D G3DSA:3.20.20.30 2 339 5.1E-45 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_3561 e128ba59c0feadb126b0a510ffe551b4 340 Pfam PF00296 Luciferase-like monooxygenase 9 258 2.9E-24 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_3561 e128ba59c0feadb126b0a510ffe551b4 340 SUPERFAMILY SSF51679 7 333 1.44E-54 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_1668 1cba27866606496089200a469db13607 252 Pfam PF14023 Protein of unknown function (DUF4239) 48 242 3.0E-5 T 14-10-2018 IPR025333 Protein of unknown function DUF4239 Amir_2639 f85f2766dc79406cf0b7cddbc4838c70 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 4.3E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2639 f85f2766dc79406cf0b7cddbc4838c70 196 SUPERFAMILY SSF46689 5 85 1.36E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2639 f85f2766dc79406cf0b7cddbc4838c70 196 Gene3D G3DSA:1.10.357.10 3 194 6.9E-24 T 14-10-2018 Amir_0125 88b78efc1715123e658f448d2643275f 433 Pfam PF01757 Acyltransferase family 42 412 9.9E-24 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Amir_6191 d50518ae870188ca69df6ef2152a0b17 428 PIRSF PIRSF000337 1 427 1.1E-138 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Amir_6191 d50518ae870188ca69df6ef2152a0b17 428 Gene3D G3DSA:3.20.20.30 3 427 2.2E-115 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_6191 d50518ae870188ca69df6ef2152a0b17 428 SUPERFAMILY SSF51679 3 425 7.85E-101 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_6191 d50518ae870188ca69df6ef2152a0b17 428 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 15 421 3.7E-110 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Amir_6191 d50518ae870188ca69df6ef2152a0b17 428 Pfam PF00296 Luciferase-like monooxygenase 23 374 7.2E-51 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_0092 c4a3958358f8b1b3c10c87e688adc27a 503 PIRSF PIRSF006446 1 491 6.1E-134 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Amir_0092 c4a3958358f8b1b3c10c87e688adc27a 503 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 468 4.2E-164 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Amir_3559 c605b4e6f4a92f1a5c900ca50ed7b56f 352 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 99 254 2.0E-30 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amir_3559 c605b4e6f4a92f1a5c900ca50ed7b56f 352 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 99 254 9.5E-27 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amir_3559 c605b4e6f4a92f1a5c900ca50ed7b56f 352 Gene3D G3DSA:1.10.260.150 64 338 2.1E-53 T 14-10-2018 Amir_2239 a06fa3c267162ea5eea28bbb8db928d4 499 TIGRFAM TIGR03688 pupylate_PafA2: proteasome accessory factor PafA2 2 485 2.1E-229 T 14-10-2018 IPR022366 Pup deamidase GO:0008233|GO:0016811 Amir_2239 a06fa3c267162ea5eea28bbb8db928d4 499 Pfam PF03136 Pup-ligase protein 3 454 2.1E-182 T 14-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 Amir_2239 a06fa3c267162ea5eea28bbb8db928d4 499 PIRSF PIRSF018077 8 496 6.5E-203 T 14-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 Amir_1889 44db423a3058d85b77de5d9bb0aebc6d 1086 Pfam PF13569 Domain of unknown function (DUF4132) 832 1011 9.4E-49 T 14-10-2018 IPR025406 Domain of unknown function DUF4132 Amir_0968 48fab8953f4903d7139fd54ebaf3f86d 120 Pfam PF13466 STAS domain 28 104 3.0E-10 T 14-10-2018 IPR002645 STAS domain Amir_0968 48fab8953f4903d7139fd54ebaf3f86d 120 Gene3D G3DSA:3.30.750.24 11 120 2.4E-20 T 14-10-2018 IPR036513 STAS domain superfamily Amir_0968 48fab8953f4903d7139fd54ebaf3f86d 120 SUPERFAMILY SSF52091 16 119 4.71E-15 T 14-10-2018 IPR036513 STAS domain superfamily Amir_6706 f1c48a8a0b79cd79d5c8ac9358826b6d 59 Pfam PF04149 Domain of unknown function (DUF397) 4 56 6.7E-22 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_6675 58f62cc59ebfc646baf698f145430719 447 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 221 234 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6675 58f62cc59ebfc646baf698f145430719 447 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 11 343 24.656 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6675 58f62cc59ebfc646baf698f145430719 447 Pfam PF00146 NADH dehydrogenase 18 336 3.5E-127 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_1083 e89297cdd01cfe9a8a4bfbd35dbb8355 512 Gene3D G3DSA:1.10.10.2840 390 512 2.0E-17 T 14-10-2018 Amir_1083 e89297cdd01cfe9a8a4bfbd35dbb8355 512 Pfam PF13556 PucR C-terminal helix-turn-helix domain 453 511 7.8E-18 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Amir_6646 5b0c18db9f80168e793fb6ad539c7f31 139 Gene3D G3DSA:3.10.129.10 2 139 1.2E-43 T 14-10-2018 Amir_6646 5b0c18db9f80168e793fb6ad539c7f31 139 SUPERFAMILY SSF54637 5 129 5.69E-27 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_6646 5b0c18db9f80168e793fb6ad539c7f31 139 Pfam PF01575 MaoC like domain 17 107 1.4E-22 T 14-10-2018 IPR002539 MaoC-like dehydratase domain Amir_6816 b58c794631d5524d2aedf8d887af02f7 266 Pfam PF14011 EspG family 10 257 2.2E-58 T 14-10-2018 IPR025734 EspG family Amir_3838 af5d1422804f3b561cc836b7cb322f01 412 SUPERFAMILY SSF53187 7 407 7.38E-27 T 14-10-2018 Amir_3838 af5d1422804f3b561cc836b7cb322f01 412 Gene3D G3DSA:3.40.630.10 80 395 1.7E-26 T 14-10-2018 Amir_3838 af5d1422804f3b561cc836b7cb322f01 412 Gene3D G3DSA:3.30.70.360 199 328 1.7E-26 T 14-10-2018 Amir_3838 af5d1422804f3b561cc836b7cb322f01 412 Pfam PF01546 Peptidase family M20/M25/M40 96 404 2.1E-15 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Amir_1272 6d3ba9603431141d5cdf433a7d7ab1a2 212 Pfam PF02698 DUF218 domain 46 176 2.9E-21 T 14-10-2018 IPR003848 Domain of unknown function DUF218 Amir_5574 990a0273ce2289ae5842eccf3a4a2072 496 Gene3D G3DSA:3.40.50.150 1 194 4.5E-34 T 14-10-2018 Amir_5574 990a0273ce2289ae5842eccf3a4a2072 496 Pfam PF00145 C-5 cytosine-specific DNA methylase 4 187 6.9E-12 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Amir_5574 990a0273ce2289ae5842eccf3a4a2072 496 SUPERFAMILY SSF53335 3 493 6.81E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3425 26dc2afb0e32a77735142a7031798e9e 136 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 128 1.3E-22 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Amir_3425 26dc2afb0e32a77735142a7031798e9e 136 SMART SM00226 5 130 5.3E-40 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Amir_3425 26dc2afb0e32a77735142a7031798e9e 136 SUPERFAMILY SSF52788 5 128 5.49E-36 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Amir_3425 26dc2afb0e32a77735142a7031798e9e 136 Gene3D G3DSA:3.40.50.2300 4 135 1.7E-51 T 14-10-2018 Amir_5742 2c0e84c412120d68f1b58da962441ad5 427 Gene3D G3DSA:3.90.1150.10 10 406 8.3E-153 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amir_5742 2c0e84c412120d68f1b58da962441ad5 427 SUPERFAMILY SSF53383 5 414 1.31E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amir_5742 2c0e84c412120d68f1b58da962441ad5 427 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 413 2.4E-160 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 Amir_5742 2c0e84c412120d68f1b58da962441ad5 427 Gene3D G3DSA:3.40.640.10 62 328 8.3E-153 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amir_5742 2c0e84c412120d68f1b58da962441ad5 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 240 277 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_5742 2c0e84c412120d68f1b58da962441ad5 427 Pfam PF00202 Aminotransferase class-III 27 411 7.1E-111 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amir_1545 db3d75bff583c3cfd2ba5a8b47dbf242 149 Pfam PF14108 Domain of unknown function (DUF4281) 5 129 6.6E-31 T 14-10-2018 IPR025461 ABA DEFICIENT 4-like Amir_1685 0cd2d09d47e1e9a14805913a47015bb1 221 SMART SM00332 1 215 3.3E-21 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_1685 0cd2d09d47e1e9a14805913a47015bb1 221 Pfam PF13672 Protein phosphatase 2C 15 184 3.6E-14 T 14-10-2018 Amir_1685 0cd2d09d47e1e9a14805913a47015bb1 221 SUPERFAMILY SSF81606 2 217 8.11E-54 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_1685 0cd2d09d47e1e9a14805913a47015bb1 221 SMART SM00331 9 217 1.8E-24 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_1685 0cd2d09d47e1e9a14805913a47015bb1 221 Gene3D G3DSA:3.60.40.10 1 218 2.1E-53 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amir_6084 9e5427b61e288d21927d9d66cf4d93cd 124 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 19 100 2.5E-24 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane Amir_6084 9e5427b61e288d21927d9d66cf4d93cd 124 Pfam PF12823 Domain of unknown function (DUF3817) 17 100 3.7E-22 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane Amir_4669 b2fe644cba9da1121ebae1bcff6f0a9e 191 Gene3D G3DSA:3.40.50.300 6 152 1.2E-28 T 14-10-2018 Amir_4669 b2fe644cba9da1121ebae1bcff6f0a9e 191 Pfam PF00005 ABC transporter 40 75 1.4E-9 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_4669 b2fe644cba9da1121ebae1bcff6f0a9e 191 SUPERFAMILY SSF52540 32 139 3.63E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_3485 1f532ec576bf8fd880adb068c4fd90ae 269 SUPERFAMILY SSF53474 9 241 1.24E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3485 1f532ec576bf8fd880adb068c4fd90ae 269 Gene3D G3DSA:3.40.50.1820 10 246 1.7E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_3344 8ff9985cd85b322f75fc8e97fd051b9b 216 Pfam PF06197 Protein of unknown function (DUF998) 23 199 8.0E-31 T 14-10-2018 IPR009339 Protein of unknown function DUF998 Amir_6494 be11bae56420cbca31f3d7a6caaabbf2 1205 Pfam PF14021 Tuberculosis necrotizing toxin 1111 1197 1.3E-25 T 14-10-2018 IPR025331 Tuberculosis necrotizing toxin KEGG: 00760+3.2.2.5 Amir_6494 be11bae56420cbca31f3d7a6caaabbf2 1205 SUPERFAMILY SSF160424 14 148 4.18E-17 T 14-10-2018 IPR036170 Probable antitoxin YezG superfamily Amir_2219 c55965413046fdecf827912642108ba1 312 Pfam PF03547 Membrane transport protein 152 307 8.5E-16 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Amir_2219 c55965413046fdecf827912642108ba1 312 Pfam PF03547 Membrane transport protein 8 131 3.1E-12 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Amir_2813 09783a73f6417805b0db8593cfbdde0f 597 SUPERFAMILY SSF140453 84 170 2.35E-5 T 14-10-2018 IPR036689 ESAT-6-like superfamily Amir_2813 09783a73f6417805b0db8593cfbdde0f 597 Gene3D G3DSA:1.10.287.1060 80 172 5.0E-5 T 14-10-2018 Amir_0337 b69fe7b5b6ad35760b7df3528dd62532 323 SUPERFAMILY SSF56219 103 320 4.58E-26 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Amir_0337 b69fe7b5b6ad35760b7df3528dd62532 323 Gene3D G3DSA:3.60.10.10 102 323 1.1E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Amir_0337 b69fe7b5b6ad35760b7df3528dd62532 323 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 120 312 1.5E-11 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Amir_0431 b5be3826afc97696120ca6d4c7307944 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 346 3.5E-70 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Amir_0431 b5be3826afc97696120ca6d4c7307944 365 Gene3D G3DSA:3.20.20.70 1 363 3.8E-124 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amir_0431 b5be3826afc97696120ca6d4c7307944 365 SUPERFAMILY SSF51395 2 359 5.36E-115 T 14-10-2018 Amir_2125 8e54dbc9284589fc0c19de8ace999f40 320 Hamap MF_02037 Histidine N-alpha-methyltransferase [egtD]. 4 318 54.408 T 14-10-2018 IPR032888 Histidine N-alpha-methyltransferase, Actinobacteria-type GO:0008276|GO:0052699 KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 Amir_2125 8e54dbc9284589fc0c19de8ace999f40 320 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 17 315 4.4E-105 T 14-10-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 Amir_2125 8e54dbc9284589fc0c19de8ace999f40 320 SUPERFAMILY SSF53335 37 313 9.98E-10 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_2125 8e54dbc9284589fc0c19de8ace999f40 320 PIRSF PIRSF018005 2 319 4.4E-121 T 14-10-2018 IPR017804 Methyltransferase EgtD-like GO:0008168 Amir_2125 8e54dbc9284589fc0c19de8ace999f40 320 Gene3D G3DSA:3.40.50.150 44 214 4.3E-48 T 14-10-2018 Amir_2125 8e54dbc9284589fc0c19de8ace999f40 320 Gene3D G3DSA:3.40.50.150 266 318 3.5E-7 T 14-10-2018 Amir_2125 8e54dbc9284589fc0c19de8ace999f40 320 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 18 317 5.0E-105 T 14-10-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent Amir_3406 28517bebd20d6f896f7bfd558fbc49d5 323 Gene3D G3DSA:1.10.10.2840 192 320 3.8E-12 T 14-10-2018 Amir_3406 28517bebd20d6f896f7bfd558fbc49d5 323 Pfam PF13556 PucR C-terminal helix-turn-helix domain 259 315 2.4E-13 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Amir_0683 6bf70557b89f178fda8d89e9bf780bc5 223 Pfam PF13559 Domain of unknown function (DUF4129) 142 211 1.8E-9 T 14-10-2018 IPR025403 Domain of unknown function DUF4129 Amir_7071 553e048f7651f58b8103c70e828a2083 639 Pfam PF10101 Predicted membrane protein (DUF2339) 138 449 2.7E-18 T 14-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane Amir_7071 553e048f7651f58b8103c70e828a2083 639 Pfam PF10101 Predicted membrane protein (DUF2339) 446 626 1.9E-10 T 14-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane Amir_1977 49c914d31c2dd376a0aae6ad010361e2 228 Pfam PF04854 Protein of unknown function, DUF624 36 115 6.1E-6 T 14-10-2018 IPR006938 Protein of unknown function DUF624 Amir_5333 423f1cf09027d61454ee594647d2c1be 206 Gene3D G3DSA:1.20.1260.10 48 206 1.3E-37 T 14-10-2018 IPR012347 Ferritin-like Amir_5333 423f1cf09027d61454ee594647d2c1be 206 Pfam PF03713 Domain of unknown function (DUF305) 59 204 7.4E-33 T 14-10-2018 IPR005183 Domain of unknown function DUF305 Amir_1749 61fa0591011b05cab333fe03909887bb 419 Gene3D G3DSA:3.20.20.80 108 331 1.2E-16 T 14-10-2018 Amir_1749 61fa0591011b05cab333fe03909887bb 419 SUPERFAMILY SSF51445 127 302 3.04E-7 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Amir_4959 058426069d347f1c7b1473bc074e4549 496 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 78 221 4.0E-9 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Amir_1846 b7d0d1ac9015cdd3c8b56a30b0dd7df0 425 SUPERFAMILY SSF53850 17 417 2.57E-84 T 14-10-2018 Amir_1846 b7d0d1ac9015cdd3c8b56a30b0dd7df0 425 Gene3D G3DSA:3.40.190.10 23 422 8.1E-86 T 14-10-2018 Amir_1846 b7d0d1ac9015cdd3c8b56a30b0dd7df0 425 Pfam PF01547 Bacterial extracellular solute-binding protein 41 329 2.4E-43 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amir_2924 5dc96527905a6d884d60e4dbe58727db 293 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 4 280 5.3E-29 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Amir_2949 94677ee994e283906776dea9ccaaf583 191 Pfam PF09684 Phage tail protein (Tail_P2_I) 35 128 2.3E-13 T 14-10-2018 IPR006521 Tail protein I Amir_2949 94677ee994e283906776dea9ccaaf583 191 TIGRFAM TIGR02242 tail_TIGR02242: phage tail protein domain 17 117 1.0E-28 T 14-10-2018 IPR011748 Uncharacterised protein family, phage tail-like Amir_1538 6cff383b672e73cfe28fc6d382ce6e16 254 SUPERFAMILY SSF117396 5 239 1.29E-73 T 14-10-2018 IPR036520 UPF0759 superfamily Amir_1538 6cff383b672e73cfe28fc6d382ce6e16 254 Pfam PF01904 Protein of unknown function DUF72 23 236 2.6E-62 T 14-10-2018 IPR002763 Protein of unknown function DUF72 Amir_1538 6cff383b672e73cfe28fc6d382ce6e16 254 Gene3D G3DSA:3.20.20.410 2 241 7.8E-67 T 14-10-2018 IPR036520 UPF0759 superfamily Amir_0757 9335c85b791433b99d75c810ac32496d 100 SUPERFAMILY SSF54909 1 82 2.33E-11 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_0757 9335c85b791433b99d75c810ac32496d 100 Pfam PF03795 YCII-related domain 1 73 2.7E-6 T 14-10-2018 IPR005545 YCII-related Amir_3148 bc311bb18ccdce3fabf486447fd6a7fd 229 Pfam PF01965 DJ-1/PfpI family 4 163 1.3E-30 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Amir_3148 bc311bb18ccdce3fabf486447fd6a7fd 229 Gene3D G3DSA:3.40.50.880 1 220 9.2E-69 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_3148 bc311bb18ccdce3fabf486447fd6a7fd 229 SUPERFAMILY SSF52317 3 183 7.33E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_2282 a7a752dd23272b98fcf721090efe8e24 236 SUPERFAMILY SSF51658 2 155 2.32E-13 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Amir_2282 a7a752dd23272b98fcf721090efe8e24 236 Gene3D G3DSA:3.20.20.150 3 161 6.1E-16 T 14-10-2018 Amir_2998 4340346ad88fd7a06c23ab5c4db3572a 203 SUPERFAMILY SSF53335 5 188 8.13E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_2998 4340346ad88fd7a06c23ab5c4db3572a 203 Pfam PF13649 Methyltransferase domain 39 132 1.4E-15 T 14-10-2018 Amir_2998 4340346ad88fd7a06c23ab5c4db3572a 203 Gene3D G3DSA:3.40.50.150 8 197 1.6E-36 T 14-10-2018 Amir_0294 863baad8aed9abafad859ebe2deb86e9 399 Gene3D G3DSA:3.40.50.300 2 182 6.7E-47 T 14-10-2018 Amir_0294 863baad8aed9abafad859ebe2deb86e9 399 SUPERFAMILY SSF52540 6 221 8.64E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0294 863baad8aed9abafad859ebe2deb86e9 399 Pfam PF13177 DNA polymerase III, delta subunit 38 181 3.4E-35 T 14-10-2018 Amir_0859 4ad8b1fbe107e760c4758059c90f92d4 549 Pfam PF09972 Predicted membrane protein (DUF2207) 44 502 5.2E-39 T 14-10-2018 IPR018702 Protein of unknown function DUF2207, membrane Amir_1373 caa4aac5fb58575bc41d9aae6e1ef616 204 SUPERFAMILY SSF81452 10 202 3.01E-56 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_1373 caa4aac5fb58575bc41d9aae6e1ef616 204 Pfam PF00510 Cytochrome c oxidase subunit III 20 202 9.2E-27 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_1373 caa4aac5fb58575bc41d9aae6e1ef616 204 Gene3D G3DSA:1.20.120.80 23 204 3.5E-53 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_2359 9739f3f00a5ac5c384a6b62d21825ec9 170 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 21 144 18.883 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 Amir_2359 9739f3f00a5ac5c384a6b62d21825ec9 170 SUPERFAMILY SSF141457 22 141 3.14E-32 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily Amir_2359 9739f3f00a5ac5c384a6b62d21825ec9 170 Pfam PF02623 FliW protein 23 141 1.3E-30 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 Amir_2359 9739f3f00a5ac5c384a6b62d21825ec9 170 Gene3D G3DSA:2.30.290.10 7 148 2.9E-34 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily Amir_0825 293824b0e6ecf92baa574ab92b88e73a 225 Gene3D G3DSA:1.20.1260.10 6 225 2.8E-78 T 14-10-2018 IPR012347 Ferritin-like Amir_0825 293824b0e6ecf92baa574ab92b88e73a 225 Pfam PF13794 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like 13 197 1.2E-84 T 14-10-2018 Amir_0825 293824b0e6ecf92baa574ab92b88e73a 225 SUPERFAMILY SSF47240 19 165 8.12E-8 T 14-10-2018 IPR009078 Ferritin-like superfamily Amir_2440 f4bc5027f5774a972c0dcb45fb3812ec 186 Pfam PF10708 Protein of unknown function (DUF2510) 8 44 1.7E-12 T 14-10-2018 IPR018929 Domain of unknown function DUF2510 Amir_4863 86db8096cba2c27fca102d6dc6fb60cd 207 SUPERFAMILY SSF48498 145 203 6.85E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amir_4863 86db8096cba2c27fca102d6dc6fb60cd 207 SUPERFAMILY SSF46689 31 95 6.98E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_4863 86db8096cba2c27fca102d6dc6fb60cd 207 Gene3D G3DSA:1.10.357.10 20 207 3.1E-51 T 14-10-2018 Amir_4863 86db8096cba2c27fca102d6dc6fb60cd 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 37 79 1.9E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_4546 11fcc17075e1c54458cd796145122ce2 357 SUPERFAMILY SSF56349 47 328 1.53E-28 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amir_4546 11fcc17075e1c54458cd796145122ce2 357 Gene3D G3DSA:1.10.150.130 43 151 1.4E-5 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Amir_4546 11fcc17075e1c54458cd796145122ce2 357 Gene3D G3DSA:1.10.443.10 154 338 3.5E-14 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amir_4546 11fcc17075e1c54458cd796145122ce2 357 Pfam PF00589 Phage integrase family 161 291 4.0E-10 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amir_4990 f1a1e6610fa6a312d5ccea3de22169cf 206 Gene3D G3DSA:3.90.870.10 1 206 9.1E-62 T 14-10-2018 Amir_4990 f1a1e6610fa6a312d5ccea3de22169cf 206 SUPERFAMILY SSF55821 1 204 1.01E-60 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Amir_4990 f1a1e6610fa6a312d5ccea3de22169cf 206 Pfam PF01300 Telomere recombination 23 198 1.1E-42 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 Amir_4990 f1a1e6610fa6a312d5ccea3de22169cf 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 2.5E-57 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 Amir_5737 d868ec63aab70f0cb24570ccb0411acd 65 ProDom PD028237 MB1616 ML1221 CGL0073 RV1590/MT1625 5 65 2.0E-8 T 14-10-2018 Amir_3027 d7c4c8bbcc2405d859619fba0d738d61 229 Gene3D G3DSA:2.60.120.180 31 229 2.2E-54 T 14-10-2018 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Amir_3027 d7c4c8bbcc2405d859619fba0d738d61 229 Pfam PF01670 Glycosyl hydrolase family 12 77 226 1.2E-20 T 14-10-2018 IPR002594 Glycoside hydrolase family 12 GO:0000272|GO:0008810 Amir_3027 d7c4c8bbcc2405d859619fba0d738d61 229 SUPERFAMILY SSF49899 29 227 3.84E-46 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_3015 04e520ab883c43376d6da2e50a85a47b 443 Gene3D G3DSA:1.20.58.1130 54 277 2.5E-9 T 14-10-2018 Amir_3015 04e520ab883c43376d6da2e50a85a47b 443 Gene3D G3DSA:1.20.1420.30 71 341 2.5E-9 T 14-10-2018 Amir_3015 04e520ab883c43376d6da2e50a85a47b 443 Pfam PF01699 Sodium/calcium exchanger protein 246 418 1.1E-5 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Amir_3015 04e520ab883c43376d6da2e50a85a47b 443 Pfam PF01699 Sodium/calcium exchanger protein 47 214 6.9E-12 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Amir_1438 b244bf206a8e3cea94fd0a3d3a65e44d 416 Gene3D G3DSA:1.20.1250.20 4 395 1.3E-34 T 14-10-2018 Amir_1438 b244bf206a8e3cea94fd0a3d3a65e44d 416 Pfam PF05977 Transmembrane secretion effector 6 406 4.5E-24 T 14-10-2018 IPR010290 Transmembrane secretion effector Amir_1438 b244bf206a8e3cea94fd0a3d3a65e44d 416 SUPERFAMILY SSF103473 7 401 6.02E-42 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_1428 3499919d16f779f0d74b8514d4a2b1b4 284 SUPERFAMILY SSF101478 8 264 5.23E-49 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Amir_1428 3499919d16f779f0d74b8514d4a2b1b4 284 Gene3D G3DSA:1.10.4080.10 5 274 1.4E-55 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Amir_1428 3499919d16f779f0d74b8514d4a2b1b4 284 Pfam PF03747 ADP-ribosylglycohydrolase 12 252 3.2E-40 T 14-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 Amir_0545 465d0148d3013cbe3cb9f72de87501f7 570 PRINTS PR01217 Proline rich extensin signature 142 158 2.2E-10 T 14-10-2018 Amir_0545 465d0148d3013cbe3cb9f72de87501f7 570 PRINTS PR01217 Proline rich extensin signature 258 283 2.2E-10 T 14-10-2018 Amir_0545 465d0148d3013cbe3cb9f72de87501f7 570 PRINTS PR01217 Proline rich extensin signature 203 219 2.2E-10 T 14-10-2018 Amir_0545 465d0148d3013cbe3cb9f72de87501f7 570 PRINTS PR01217 Proline rich extensin signature 182 203 2.2E-10 T 14-10-2018 Amir_0545 465d0148d3013cbe3cb9f72de87501f7 570 PRINTS PR01217 Proline rich extensin signature 221 238 2.2E-10 T 14-10-2018 Amir_2711 e589c8ce921582a778d4dd3ab89846d5 93 Pfam PF14117 Domain of unknown function (DUF4287) 2 63 2.3E-25 T 14-10-2018 IPR025629 Protein of unknown function DUF4287 Amir_0886 4479d330b7fd3f0bf340f02cece30d25 955 Pfam PF12846 AAA-like domain 622 825 4.8E-20 T 14-10-2018 Amir_0886 4479d330b7fd3f0bf340f02cece30d25 955 SUPERFAMILY SSF52540 459 822 3.19E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2408 98d7345fe8e63d6febf5e721be99ce3c 232 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_2408 98d7345fe8e63d6febf5e721be99ce3c 232 SMART SM00382 26 203 3.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2408 98d7345fe8e63d6febf5e721be99ce3c 232 Gene3D G3DSA:3.40.50.300 1 229 3.2E-52 T 14-10-2018 Amir_2408 98d7345fe8e63d6febf5e721be99ce3c 232 SUPERFAMILY SSF52540 1 220 4.32E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2408 98d7345fe8e63d6febf5e721be99ce3c 232 Pfam PF00005 ABC transporter 19 155 2.1E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_1346 e468acd84183c8336149f2789df6cccd 147 SUPERFAMILY SSF54427 6 132 2.4E-34 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_1346 e468acd84183c8336149f2789df6cccd 147 Gene3D G3DSA:3.10.450.50 6 134 2.3E-39 T 14-10-2018 Amir_1346 e468acd84183c8336149f2789df6cccd 147 Pfam PF12680 SnoaL-like domain 10 117 7.2E-17 T 14-10-2018 IPR037401 SnoaL-like domain Amir_4878 341cafb565a6202095aa0a8f79288fae 196 SUPERFAMILY SSF52309 21 143 1.83E-5 T 14-10-2018 Amir_5005 f9f1f963dee0ed76efe74918e375f65a 254 Gene3D G3DSA:3.40.33.10 44 253 3.6E-53 T 14-10-2018 IPR035940 CAP superfamily Amir_5005 f9f1f963dee0ed76efe74918e375f65a 254 SUPERFAMILY SSF55797 133 253 8.2E-25 T 14-10-2018 IPR035940 CAP superfamily Amir_5005 f9f1f963dee0ed76efe74918e375f65a 254 Pfam PF00188 Cysteine-rich secretory protein family 138 252 4.3E-24 T 14-10-2018 IPR014044 CAP domain Amir_5267 64709ada820f765b20ff5de2f1122cd3 135 Pfam PF06103 Bacterial protein of unknown function (DUF948) 6 87 5.7E-19 T 14-10-2018 IPR009293 Uncharacterised protein family UPF0478 Amir_6658 6cdcecd7f020934163d7f12a23a1a4e4 137 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 48 132 8.1E-19 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amir_6658 6cdcecd7f020934163d7f12a23a1a4e4 137 SUPERFAMILY SSF56770 5 135 4.06E-42 T 14-10-2018 Amir_6658 6cdcecd7f020934163d7f12a23a1a4e4 137 Gene3D G3DSA:3.40.50.12280 2 137 4.8E-52 T 14-10-2018 Amir_5928 be415b0a8736061fa6ed213cf8b0484e 238 Pfam PF02517 CAAX protease self-immunity 136 223 5.5E-14 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Amir_0135 b1f6197d47330b8fb78c6012dc862f89 182 Pfam PF10759 Protein of unknown function (DUF2587) 35 181 8.8E-79 T 14-10-2018 IPR019695 Bacterial proteasome activator GO:0061136 Amir_0927 7bd1c3985eea1444e8c46f446276f126 242 ProDom PD037701 MEMBRANE INTEGRAL TRANSMEMBRANE RV2219/MT2276 NARROWLY PROBABLE PRECURSOR SIGNAL MLCB22.21 27 227 5.0E-63 T 14-10-2018 Amir_0927 7bd1c3985eea1444e8c46f446276f126 242 Pfam PF13829 Domain of unknown function (DUF4191) 20 233 5.9E-86 T 14-10-2018 IPR025445 Protein of unknown function DUF4191 Amir_0551 77054fa27bae440587ae6a31e5dd9fb4 271 Gene3D G3DSA:3.40.50.720 4 257 8.4E-80 T 14-10-2018 Amir_0551 77054fa27bae440587ae6a31e5dd9fb4 271 Pfam PF05368 NmrA-like family 4 152 1.5E-19 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 Amir_0551 77054fa27bae440587ae6a31e5dd9fb4 271 SUPERFAMILY SSF51735 3 216 1.11E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_0551 77054fa27bae440587ae6a31e5dd9fb4 271 Gene3D G3DSA:3.90.25.10 137 258 8.4E-80 T 14-10-2018 Amir_1804 82d29c76baea3eb11a753c51c2b4f0a7 133 Pfam PF06150 ChaB 7 61 4.0E-19 T 14-10-2018 IPR009317 ChaB Amir_1804 82d29c76baea3eb11a753c51c2b4f0a7 133 SUPERFAMILY SSF140376 4 61 1.57E-16 T 14-10-2018 IPR037205 ChaB superfamily Amir_1804 82d29c76baea3eb11a753c51c2b4f0a7 133 Gene3D G3DSA:1.10.1740.70 2 62 7.2E-10 T 14-10-2018 Amir_1804 82d29c76baea3eb11a753c51c2b4f0a7 133 Pfam PF07498 Rho termination factor, N-terminal domain 95 122 9.9E-6 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Amir_5111 1e4118c1278536675782790eb7726b69 163 Pfam PF03861 ANTAR domain 25 76 1.1E-15 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_5111 1e4118c1278536675782790eb7726b69 163 SUPERFAMILY SSF52172 14 75 2.44E-5 T 14-10-2018 IPR011006 CheY-like superfamily Amir_5111 1e4118c1278536675782790eb7726b69 163 Gene3D G3DSA:1.10.10.10 24 82 1.8E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5111 1e4118c1278536675782790eb7726b69 163 SMART SM01012 21 76 1.7E-16 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Amir_4093 7b46682255222be17bfc6fbcb2ec0657 257 Pfam PF05988 Bacterial protein of unknown function (DUF899) 1 245 5.6E-88 T 14-10-2018 IPR010296 Protein of unknown function DUF899, thioredoxin-like Amir_0263 25dab5f654e90708b68d36fdbe7427ff 193 Gene3D G3DSA:3.40.630.30 1 193 4.6E-50 T 14-10-2018 Amir_0263 25dab5f654e90708b68d36fdbe7427ff 193 Pfam PF13302 Acetyltransferase (GNAT) domain 14 150 2.7E-15 T 14-10-2018 IPR000182 GNAT domain Amir_0263 25dab5f654e90708b68d36fdbe7427ff 193 SUPERFAMILY SSF55729 5 176 1.77E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_0344 cc81fae92c103b30cbba87f83837b7d0 163 SUPERFAMILY SSF53056 25 162 2.22E-32 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Amir_0344 cc81fae92c103b30cbba87f83837b7d0 163 Gene3D G3DSA:3.40.1050.10 1 163 4.9E-52 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Amir_0344 cc81fae92c103b30cbba87f83837b7d0 163 SMART SM00947 24 163 6.5E-26 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Amir_0344 cc81fae92c103b30cbba87f83837b7d0 163 Pfam PF00484 Carbonic anhydrase 32 94 5.2E-12 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Amir_3482 2d524ade9afe8c329525f01db80da655 256 Pfam PF14011 EspG family 8 241 5.0E-32 T 14-10-2018 IPR025734 EspG family Amir_1416 1a250284610ab94d8ac0f86d15ff4a0a 402 Gene3D G3DSA:1.20.1250.20 4 401 1.8E-32 T 14-10-2018 Amir_1416 1a250284610ab94d8ac0f86d15ff4a0a 402 SUPERFAMILY SSF103473 9 401 4.97E-38 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_1416 1a250284610ab94d8ac0f86d15ff4a0a 402 Pfam PF07690 Major Facilitator Superfamily 37 305 1.8E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_1401 2b1338ff42654b3f93703562a5a9b0f3 296 Gene3D G3DSA:3.20.20.220 2 296 1.3E-93 T 14-10-2018 Amir_1401 2b1338ff42654b3f93703562a5a9b0f3 296 Pfam PF02219 Methylenetetrahydrofolate reductase 7 288 6.9E-89 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Amir_1401 2b1338ff42654b3f93703562a5a9b0f3 296 SUPERFAMILY SSF51730 4 290 1.92E-87 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like Amir_3291 7ee7b7e0c7b913de6725ab7d10deb9bd 258 SUPERFAMILY SSF54001 2 252 4.51E-56 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amir_3291 7ee7b7e0c7b913de6725ab7d10deb9bd 258 Pfam PF00797 N-acetyltransferase 21 252 1.6E-43 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 Amir_3291 7ee7b7e0c7b913de6725ab7d10deb9bd 258 Gene3D G3DSA:3.30.2140.10 3 251 5.1E-50 T 14-10-2018 Amir_3291 7ee7b7e0c7b913de6725ab7d10deb9bd 258 Gene3D G3DSA:2.40.128.150 90 185 5.1E-50 T 14-10-2018 Amir_4321 fa20a201037e7ab5ea796f825fe9c3a0 323 Gene3D G3DSA:1.10.3720.10 93 302 2.7E-20 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4321 fa20a201037e7ab5ea796f825fe9c3a0 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 309 1.2E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_4321 fa20a201037e7ab5ea796f825fe9c3a0 323 SUPERFAMILY SSF161098 98 297 1.27E-16 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4611 f5c8d9274eb8813a5b09a73525e8ce75 283 SUPERFAMILY SSF161098 13 283 2.43E-59 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4611 f5c8d9274eb8813a5b09a73525e8ce75 283 Gene3D G3DSA:1.10.3720.10 10 273 6.7E-52 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4611 f5c8d9274eb8813a5b09a73525e8ce75 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 274 4.2E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_2003 a7b2ac64e79df1294351b53db7730d42 140 SUPERFAMILY SSF54593 1 132 9.9E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_2003 a7b2ac64e79df1294351b53db7730d42 140 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 130 2.9E-10 T 14-10-2018 IPR028973 PhnB-like Amir_2003 a7b2ac64e79df1294351b53db7730d42 140 Gene3D G3DSA:3.10.180.10 9 140 2.9E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_2137 76a2185aa4349d53a0347f3c727fa283 254 Gene3D G3DSA:3.30.1600.10 21 160 1.5E-66 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily Amir_2137 76a2185aa4349d53a0347f3c727fa283 254 SUPERFAMILY SSF52467 3 237 1.4E-64 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amir_2137 76a2185aa4349d53a0347f3c727fa283 254 Pfam PF02146 Sir2 family 12 190 1.1E-43 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 Amir_2137 76a2185aa4349d53a0347f3c727fa283 254 Gene3D G3DSA:3.40.50.1220 2 219 1.5E-66 T 14-10-2018 Amir_0503 39959cba40ed9fc5b0f17ed55b58015f 178 Pfam PF14016 Protein of unknown function (DUF4232) 43 175 2.0E-28 T 14-10-2018 IPR025326 Protein of unknown function DUF4232 Amir_4592 eacfec9a99aadd47c706dc8beb701c62 408 SUPERFAMILY SSF103473 18 406 3.4E-35 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4592 eacfec9a99aadd47c706dc8beb701c62 408 Gene3D G3DSA:1.20.1250.20 14 401 2.4E-32 T 14-10-2018 Amir_4592 eacfec9a99aadd47c706dc8beb701c62 408 Pfam PF07690 Major Facilitator Superfamily 24 249 1.2E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_3762 298f0d005652ba44f1def02e3965081b 376 Pfam PF07070 SpoOM protein 2 217 6.6E-79 T 14-10-2018 IPR009776 Sporulation stage 0, protein M Amir_6921 3ddcec3d2ebe74da1c9b826c8b2b5544 95 Gene3D G3DSA:3.30.70.1060 5 88 3.7E-16 T 14-10-2018 Amir_6921 3ddcec3d2ebe74da1c9b826c8b2b5544 95 SUPERFAMILY SSF54909 1 86 8.22E-23 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Amir_6921 3ddcec3d2ebe74da1c9b826c8b2b5544 95 Pfam PF03795 YCII-related domain 10 85 9.2E-15 T 14-10-2018 IPR005545 YCII-related Amir_3952 b663b8010ba53bb10b6af3021183b43c 390 SUPERFAMILY SSF140459 15 114 8.63E-8 T 14-10-2018 Amir_3952 b663b8010ba53bb10b6af3021183b43c 390 Gene3D G3DSA:1.20.1260.20 15 118 2.2E-7 T 14-10-2018 IPR038332 PPE superfamily Amir_6383 f8eac4a0ccd51fc1b804f63d960e5767 781 Pfam PF14021 Tuberculosis necrotizing toxin 694 779 2.8E-26 T 14-10-2018 IPR025331 Tuberculosis necrotizing toxin KEGG: 00760+3.2.2.5 Amir_4396 5749c88dfe46dc420a777e470dffac22 229 SUPERFAMILY SSF52317 2 224 9.74E-74 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_4396 5749c88dfe46dc420a777e470dffac22 229 Gene3D G3DSA:3.40.50.880 1 224 5.8E-79 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Amir_4396 5749c88dfe46dc420a777e470dffac22 229 Pfam PF01965 DJ-1/PfpI family 25 213 1.1E-13 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Amir_5547 4e5a8420dc4f6f0319de631b382eadc1 747 Pfam PF05729 NACHT domain 130 222 2.5E-7 T 14-10-2018 IPR007111 NACHT nucleoside triphosphatase Amir_5547 4e5a8420dc4f6f0319de631b382eadc1 747 SUPERFAMILY SSF52540 67 219 7.02E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2889 3b1e258c76aeab12949306c8fc8b82a8 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 60 1.0E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amir_2889 3b1e258c76aeab12949306c8fc8b82a8 227 SUPERFAMILY SSF46689 2 80 3.49E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amir_2889 3b1e258c76aeab12949306c8fc8b82a8 227 Gene3D G3DSA:1.10.357.10 3 218 7.1E-30 T 14-10-2018 Amir_5960 91fa94b6d0a576b418022e90027bd488 226 SMART SM00862 148 224 1.4E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_5960 91fa94b6d0a576b418022e90027bd488 226 SUPERFAMILY SSF52172 1 183 7.54E-42 T 14-10-2018 IPR011006 CheY-like superfamily Amir_5960 91fa94b6d0a576b418022e90027bd488 226 Gene3D G3DSA:3.40.50.2300 1 124 1.9E-37 T 14-10-2018 Amir_5960 91fa94b6d0a576b418022e90027bd488 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 5.8E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amir_5960 91fa94b6d0a576b418022e90027bd488 226 Gene3D G3DSA:1.10.10.10 125 225 1.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_5960 91fa94b6d0a576b418022e90027bd488 226 Pfam PF00072 Response regulator receiver domain 4 112 1.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_5960 91fa94b6d0a576b418022e90027bd488 226 SMART SM00448 2 112 5.5E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amir_6644 1f120cda55db8dfca1b9a93b60759275 203 Gene3D G3DSA:2.60.40.2880 112 202 7.9E-13 T 14-10-2018 IPR038468 Transport accessory protein MmpS, soluble domain superfamily Amir_6644 1f120cda55db8dfca1b9a93b60759275 203 Pfam PF05423 Mycobacterium membrane protein 112 200 2.4E-5 T 14-10-2018 IPR008693 Transport accessory protein MmpS Amir_4517 d3388aa2dc8aff0e3a6f395a09897e36 119 Pfam PF00934 PE family 20 106 1.5E-6 T 14-10-2018 IPR000084 PE-PGRS family, N-terminal Amir_1581 39165f73f73292ae2f04865e8c587f7a 335 Pfam PF03969 AFG1-like ATPase 41 220 1.1E-42 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 Amir_1581 39165f73f73292ae2f04865e8c587f7a 335 Pfam PF03969 AFG1-like ATPase 235 333 3.2E-15 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 Amir_1581 39165f73f73292ae2f04865e8c587f7a 335 SUPERFAMILY SSF52540 79 203 6.03E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1581 39165f73f73292ae2f04865e8c587f7a 335 Gene3D G3DSA:3.40.50.300 16 202 1.1E-13 T 14-10-2018 Amir_1738 18b98a9c12be6db59036b22079473b20 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 48 3.4E-7 T 14-10-2018 IPR001451 Hexapeptide repeat Amir_1738 18b98a9c12be6db59036b22079473b20 201 Gene3D G3DSA:2.160.10.10 2 152 3.4E-33 T 14-10-2018 Amir_1738 18b98a9c12be6db59036b22079473b20 201 SUPERFAMILY SSF51161 17 163 7.07E-35 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Amir_3048 0ebef4eb9f2adbcb402b8664ed697c5b 109 SUPERFAMILY SSF54593 9 108 6.36E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_3048 0ebef4eb9f2adbcb402b8664ed697c5b 109 Gene3D G3DSA:3.10.180.10 3 108 2.3E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_2028 4af061e80a7db37332c368a8913db58f 319 SUPERFAMILY SSF53850 10 235 3.12E-37 T 14-10-2018 Amir_2028 4af061e80a7db37332c368a8913db58f 319 SMART SM00062 19 294 1.9E-21 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_2028 4af061e80a7db37332c368a8913db58f 319 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 20 233 1.7E-22 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amir_2028 4af061e80a7db37332c368a8913db58f 319 Gene3D G3DSA:3.40.190.10 10 229 2.6E-39 T 14-10-2018 Amir_2028 4af061e80a7db37332c368a8913db58f 319 Gene3D G3DSA:3.40.190.10 111 206 2.6E-39 T 14-10-2018 Amir_5809 e5b35a0ca777222c25ade6d3ba735264 487 Gene3D G3DSA:1.10.510.10 105 283 7.6E-44 T 14-10-2018 Amir_5809 e5b35a0ca777222c25ade6d3ba735264 487 Gene3D G3DSA:3.30.200.20 11 103 4.7E-28 T 14-10-2018 Amir_5809 e5b35a0ca777222c25ade6d3ba735264 487 Pfam PF00069 Protein kinase domain 20 269 2.2E-48 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_5809 e5b35a0ca777222c25ade6d3ba735264 487 SUPERFAMILY SSF56112 7 302 8.09E-69 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_5809 e5b35a0ca777222c25ade6d3ba735264 487 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 26 49 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amir_5809 e5b35a0ca777222c25ade6d3ba735264 487 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 143 155 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amir_5809 e5b35a0ca777222c25ade6d3ba735264 487 SMART SM00220 20 274 1.9E-58 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amir_5170 bc172c1cc6e5705cd3ec5b33f53af2f2 267 Pfam PF05331 Protein of unknown function (DUF742) 155 267 6.6E-33 T 14-10-2018 IPR007995 Protein of unknown function DUF742 Amir_6170 767b1c55a665f59fffd4c5793669e9f3 88 SUPERFAMILY SSF48452 3 67 1.19E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_1921 6b1a2e8affa47f5defb4a04177377367 165 Gene3D G3DSA:3.30.565.10 8 122 1.4E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_0381 f2fb1c683e7df0fd0f8902aa6fbe6560 135 Pfam PF04205 FMN-binding domain 64 131 1.9E-7 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amir_0381 f2fb1c683e7df0fd0f8902aa6fbe6560 135 Gene3D G3DSA:3.90.1010.20 51 135 3.8E-6 T 14-10-2018 Amir_0381 f2fb1c683e7df0fd0f8902aa6fbe6560 135 SMART SM00900 62 134 1.7E-5 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amir_1627 cb959a867c02c4e50662fbd206f1e6b3 59 Pfam PF04149 Domain of unknown function (DUF397) 4 54 2.0E-20 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_4113 c70b883afac15aedecf3d002ad1460e4 248 Pfam PF00106 short chain dehydrogenase 8 170 2.8E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_4113 c70b883afac15aedecf3d002ad1460e4 248 Gene3D G3DSA:3.40.50.720 1 240 2.5E-27 T 14-10-2018 Amir_4113 c70b883afac15aedecf3d002ad1460e4 248 SUPERFAMILY SSF51735 1 232 2.34E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1849 d2dcf386b7d1e9496a8831e02cade31e 347 Pfam PF02558 Ketopantoate reductase PanE/ApbA 6 110 1.3E-7 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain Amir_1849 d2dcf386b7d1e9496a8831e02cade31e 347 SUPERFAMILY SSF51735 6 184 7.25E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1849 d2dcf386b7d1e9496a8831e02cade31e 347 Gene3D G3DSA:3.40.50.720 4 152 1.0E-9 T 14-10-2018 Amir_1371 5301d4937890a4174013c84ed97dc95f 136 SUPERFAMILY SSF52172 7 129 1.61E-7 T 14-10-2018 IPR011006 CheY-like superfamily Amir_1371 5301d4937890a4174013c84ed97dc95f 136 Gene3D G3DSA:3.40.50.2300 1 131 4.9E-8 T 14-10-2018 Amir_4380 bdd97c5cf27136eb1a36df155dd0b72e 327 Gene3D G3DSA:1.10.357.140 25 164 6.0E-7 T 14-10-2018 Amir_4380 bdd97c5cf27136eb1a36df155dd0b72e 327 Pfam PF01040 UbiA prenyltransferase family 28 245 8.5E-29 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Amir_6621 efda29dbde7f771442244788a81fc75e 100 Gene3D G3DSA:1.10.287.1060 5 95 1.6E-7 T 14-10-2018 Amir_1612 30febde9019d6b19daecaafe9572f457 393 Gene3D G3DSA:1.20.1530.20 4 385 1.2E-55 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Amir_1612 30febde9019d6b19daecaafe9572f457 393 Pfam PF00999 Sodium/hydrogen exchanger family 14 371 8.5E-45 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Amir_1086 fd915814e4a0e5ef89be7c4b1e642a76 206 Gene3D G3DSA:3.40.50.300 8 195 5.8E-12 T 14-10-2018 Amir_3618 7e5256273c4a455bee7533049650c9d9 315 Gene3D G3DSA:1.10.620.20 67 262 2.1E-16 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Amir_3618 7e5256273c4a455bee7533049650c9d9 315 SUPERFAMILY SSF47240 66 243 1.32E-15 T 14-10-2018 IPR009078 Ferritin-like superfamily Amir_0402 0c9858cce0cddc45ddf0cab1cabcb612 330 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 317 8.7E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0402 0c9858cce0cddc45ddf0cab1cabcb612 330 Gene3D G3DSA:1.10.3720.10 82 326 2.5E-56 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0402 0c9858cce0cddc45ddf0cab1cabcb612 330 SUPERFAMILY SSF161098 86 315 2.88E-52 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2943 02d91a0f1194fdeb43002e902b875a04 141 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 9 139 3.5E-26 T 14-10-2018 IPR011747 Conserved hypothetical protein CHP02241 Amir_2943 02d91a0f1194fdeb43002e902b875a04 141 Pfam PF06841 T4-like virus tail tube protein gp19 9 139 5.2E-33 T 14-10-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 Amir_5779 3eb9340d3208ceec7642fe0fa2471ba5 128 Pfam PF11239 Protein of unknown function (DUF3040) 1 84 6.4E-30 T 14-10-2018 IPR021401 Protein of unknown function DUF3040 Amir_3960 3ddd4639aa1a5266bddc6da247715afd 295 Gene3D G3DSA:3.40.710.10 1 295 4.3E-69 T 14-10-2018 Amir_3960 3ddd4639aa1a5266bddc6da247715afd 295 SUPERFAMILY SSF56601 3 268 1.32E-31 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amir_3960 3ddd4639aa1a5266bddc6da247715afd 295 Pfam PF13354 Beta-lactamase enzyme family 23 262 3.4E-46 T 14-10-2018 Amir_6056 48a370fbdbb3df68249792a94f635a53 248 Pfam PF08241 Methyltransferase domain 44 135 6.5E-21 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_6056 48a370fbdbb3df68249792a94f635a53 248 SUPERFAMILY SSF53335 22 191 1.39E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_6056 48a370fbdbb3df68249792a94f635a53 248 Gene3D G3DSA:3.40.50.150 25 193 1.0E-36 T 14-10-2018 Amir_4566 8cd9d329a64d3035b4001ba4aae059e7 157 Pfam PF10901 Protein of unknown function (DUF2690) 44 126 4.2E-5 T 14-10-2018 IPR021224 Protein of unknown function DUF2690 Amir_3815 481196d1a3695e7ee58fa44f4afd237c 108 TIGRFAM TIGR03462 CarR_dom_SF: lycopene cyclase domain 11 94 4.6E-16 T 14-10-2018 IPR017825 Lycopene cyclase domain GO:0016872 KEGG: 00906+2.5.1.32+5.5.1.19|MetaCyc: PWY-5943|MetaCyc: PWY-5947|MetaCyc: PWY-6279|MetaCyc: PWY-7591|MetaCyc: PWY-7938|MetaCyc: PWY-7939|MetaCyc: PWY-7947 Amir_2145 74e20dba167d6efc6bc4a0debe58ed1c 346 SUPERFAMILY SSF52540 17 300 3.78E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2145 74e20dba167d6efc6bc4a0debe58ed1c 346 PIRSF PIRSF002849 2 330 7.1E-134 T 14-10-2018 Amir_2145 74e20dba167d6efc6bc4a0debe58ed1c 346 Gene3D G3DSA:1.10.8.300 208 325 2.8E-34 T 14-10-2018 Amir_2145 74e20dba167d6efc6bc4a0debe58ed1c 346 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 49 179 1.2E-59 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Amir_2145 74e20dba167d6efc6bc4a0debe58ed1c 346 Gene3D G3DSA:3.40.50.300 15 207 3.7E-45 T 14-10-2018 Amir_0633 c844f80d17bf1e2000aff8d758c3555c 209 SUPERFAMILY SSF55073 12 142 6.28E-5 T 14-10-2018 IPR029787 Nucleotide cyclase Amir_0192 20a945ff164f0fcf10ca78155d00c8a7 321 TIGRFAM TIGR04187 GRASP_SAV_5884: ATP-grasp ribosomal peptide maturase, SAV_5884 family 2 317 6.9E-129 T 14-10-2018 IPR026449 ATP-grasp ribosomal peptide maturase, SAV-5884 family Amir_0192 20a945ff164f0fcf10ca78155d00c8a7 321 Gene3D G3DSA:3.30.470.20 210 318 3.2E-14 T 14-10-2018 Amir_0192 20a945ff164f0fcf10ca78155d00c8a7 321 SUPERFAMILY SSF56059 132 318 1.73E-16 T 14-10-2018 Amir_3797 8034a86afd8952cac95d02db0b2b33d8 136 SUPERFAMILY SSF50346 8 130 1.41E-14 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Amir_4796 806729b30f3a4e6d265fb7c386996b94 423 Pfam PF04143 Sulphur transport 75 403 2.0E-64 T 14-10-2018 IPR007272 Sulphur transport domain Amir_2261 42a65eaee3ecdb78682df9c379e78bbb 399 Gene3D G3DSA:1.20.1250.20 12 387 7.9E-24 T 14-10-2018 Amir_2261 42a65eaee3ecdb78682df9c379e78bbb 399 Pfam PF07690 Major Facilitator Superfamily 17 228 1.7E-8 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2261 42a65eaee3ecdb78682df9c379e78bbb 399 SUPERFAMILY SSF103473 14 384 2.88E-26 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4651 d0de8af2acb71c4f2eeb9f1148d0716c 82 Gene3D G3DSA:1.10.1200.10 4 81 2.5E-16 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4651 d0de8af2acb71c4f2eeb9f1148d0716c 82 SUPERFAMILY SSF47336 7 80 5.23E-13 T 14-10-2018 IPR036736 ACP-like superfamily Amir_4651 d0de8af2acb71c4f2eeb9f1148d0716c 82 Pfam PF00550 Phosphopantetheine attachment site 14 76 1.1E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2486 ec4830e1eb6be7729b16a4324cfda061 257 SUPERFAMILY SSF49879 19 87 2.68E-7 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Amir_2439 5848f7060dbf01f92aa0a79865a9b2a8 450 Pfam PF13250 Domain of unknown function (DUF4041) 154 209 2.4E-18 T 14-10-2018 IPR025280 Domain of unknown function DUF4041 Amir_2439 5848f7060dbf01f92aa0a79865a9b2a8 450 Pfam PF10544 T5orf172 domain 304 393 1.4E-12 T 14-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding Amir_2439 5848f7060dbf01f92aa0a79865a9b2a8 450 SMART SM00974 314 397 3.1E-29 T 14-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding Amir_4186 c0d0acb0ed585279f5e3f2752a795ea2 528 Pfam PF00733 Asparagine synthase 284 519 3.4E-5 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Amir_3013 7303ec3addb9291c25600b27edce276f 169 Gene3D G3DSA:3.40.50.360 5 164 4.4E-11 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Amir_3013 7303ec3addb9291c25600b27edce276f 169 SUPERFAMILY SSF52218 1 68 1.08E-10 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Amir_0626 7f9b995d196eaace03b65a78ef88ec69 101 Pfam PF09723 Zinc ribbon domain 2 39 1.7E-14 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Amir_0626 7f9b995d196eaace03b65a78ef88ec69 101 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 2 51 4.3E-20 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Amir_0626 7f9b995d196eaace03b65a78ef88ec69 101 SMART SM00834 2 41 1.2E-13 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Amir_4659 6356ca8f25ada5417e1fc8155ae94524 239 SUPERFAMILY SSF55729 49 124 2.85E-8 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_4659 6356ca8f25ada5417e1fc8155ae94524 239 Gene3D G3DSA:3.40.630.30 29 162 1.1E-5 T 14-10-2018 Amir_6900 67c26d9aed9190deea0ece0984568907 437 SUPERFAMILY SSF140459 33 183 5.49E-6 T 14-10-2018 Amir_6900 67c26d9aed9190deea0ece0984568907 437 Gene3D G3DSA:1.20.1260.20 25 184 4.9E-5 T 14-10-2018 IPR038332 PPE superfamily Amir_3239 c13d340f8274dca7ae52ff6c1936051c 336 SUPERFAMILY SSF53633 183 281 9.94E-5 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amir_3239 c13d340f8274dca7ae52ff6c1936051c 336 Pfam PF02698 DUF218 domain 163 308 3.9E-33 T 14-10-2018 IPR003848 Domain of unknown function DUF218 Amir_1095 4d40f562d4d69dedba6213c965535ce5 316 SUPERFAMILY SSF53328 1 204 2.09E-56 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amir_1095 4d40f562d4d69dedba6213c965535ce5 316 SUPERFAMILY SSF50486 204 307 2.67E-16 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Amir_1095 4d40f562d4d69dedba6213c965535ce5 316 Pfam PF00551 Formyl transferase 1 169 7.7E-30 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amir_1095 4d40f562d4d69dedba6213c965535ce5 316 Gene3D G3DSA:3.40.50.12230 1 308 1.5E-84 T 14-10-2018 Amir_1095 4d40f562d4d69dedba6213c965535ce5 316 Pfam PF02911 Formyl transferase, C-terminal domain 204 305 5.0E-15 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amir_4647 5704b804af7da6dfa4f1388b41737bf2 416 Pfam PF07690 Major Facilitator Superfamily 23 247 1.2E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_4647 5704b804af7da6dfa4f1388b41737bf2 416 Pfam PF07690 Major Facilitator Superfamily 249 405 2.7E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_4647 5704b804af7da6dfa4f1388b41737bf2 416 Gene3D G3DSA:1.20.1250.20 12 400 4.2E-36 T 14-10-2018 Amir_4647 5704b804af7da6dfa4f1388b41737bf2 416 SUPERFAMILY SSF103473 14 398 4.19E-44 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_3224 5e302592cb8d29170d49562be44c409d 378 Pfam PF09594 Glycosyltransferase family 87 70 288 1.4E-53 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 Amir_1819 dc8908e11636fcab18760d1bd480337a 111 SUPERFAMILY SSF52091 11 105 9.61E-17 T 14-10-2018 IPR036513 STAS domain superfamily Amir_1819 dc8908e11636fcab18760d1bd480337a 111 Gene3D G3DSA:3.30.750.24 4 111 1.4E-21 T 14-10-2018 IPR036513 STAS domain superfamily Amir_1819 dc8908e11636fcab18760d1bd480337a 111 Pfam PF13466 STAS domain 19 97 1.1E-12 T 14-10-2018 IPR002645 STAS domain Amir_5966 0bdbfaf1a03b422bdacf288c036cb1c9 148 Pfam PF02620 Uncharacterized ACR, COG1399 25 135 1.5E-29 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Amir_6402 91eeb0dbe6445c57304390b46e9cd457 268 Pfam PF14011 EspG family 20 261 1.6E-67 T 14-10-2018 IPR025734 EspG family Amir_6172 a61d560db86d5de012084260271bd1df 186 Gene3D G3DSA:3.30.530.20 24 181 1.2E-43 T 14-10-2018 IPR023393 START-like domain superfamily Amir_6172 a61d560db86d5de012084260271bd1df 186 SUPERFAMILY SSF55961 35 179 3.26E-39 T 14-10-2018 Amir_6172 a61d560db86d5de012084260271bd1df 186 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 48 179 3.4E-25 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like Amir_4220 ea2e25ff5779e77caee778fec2758f78 210 Pfam PF13460 NAD(P)H-binding 10 142 2.6E-21 T 14-10-2018 IPR016040 NAD(P)-binding domain Amir_4220 ea2e25ff5779e77caee778fec2758f78 210 SUPERFAMILY SSF51735 5 206 2.21E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4220 ea2e25ff5779e77caee778fec2758f78 210 Gene3D G3DSA:3.40.50.720 4 207 2.5E-25 T 14-10-2018 Amir_2085 370fe80217e420d83b954d11f3d8f4ab 318 Gene3D G3DSA:3.40.50.300 1 232 1.6E-67 T 14-10-2018 Amir_2085 370fe80217e420d83b954d11f3d8f4ab 318 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amir_2085 370fe80217e420d83b954d11f3d8f4ab 318 TIGRFAM TIGR01188 drrA: daunorubicin resistance ABC transporter, ATP-binding protein 13 311 9.3E-95 T 14-10-2018 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA GO:0005524|GO:0043215|GO:1900753 Amir_2085 370fe80217e420d83b954d11f3d8f4ab 318 SMART SM00382 30 216 1.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_2085 370fe80217e420d83b954d11f3d8f4ab 318 SUPERFAMILY SSF52540 4 226 2.45E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_2085 370fe80217e420d83b954d11f3d8f4ab 318 Pfam PF00005 ABC transporter 21 164 3.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amir_3365 f73c47e504d8c5e61b9a0e968ba2bf30 336 SUPERFAMILY SSF51430 1 311 4.06E-81 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3365 f73c47e504d8c5e61b9a0e968ba2bf30 336 Pfam PF00248 Aldo/keto reductase family 15 310 1.2E-58 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_3365 f73c47e504d8c5e61b9a0e968ba2bf30 336 Gene3D G3DSA:3.20.20.100 1 334 5.2E-99 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_0413 99a2ce3991fc8f4c6587128d13cbeeac 68 Pfam PF04149 Domain of unknown function (DUF397) 8 62 9.2E-17 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_1376 f73170f2807dbb2cbd5a4ada113f0d1c 564 Pfam PF13631 Cytochrome b(N-terminal)/b6/petB 124 297 8.2E-61 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Amir_1376 f73170f2807dbb2cbd5a4ada113f0d1c 564 Gene3D G3DSA:1.20.810.10 13 453 2.2E-89 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 Amir_1376 f73170f2807dbb2cbd5a4ada113f0d1c 564 SUPERFAMILY SSF81342 23 302 7.22E-62 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Amir_0447 7b1a3fc88afb778733760ff338e9ead0 303 Gene3D G3DSA:1.10.3720.10 55 299 2.9E-56 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0447 7b1a3fc88afb778733760ff338e9ead0 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 289 1.4E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0447 7b1a3fc88afb778733760ff338e9ead0 303 SUPERFAMILY SSF161098 59 289 1.31E-51 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3042 c3389eec18c80f4575fa2c3fa882fe0c 340 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 317 9.3E-40 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amir_5794 095461f2d66128e828676d387b3c7106 415 Pfam PF00860 Permease family 31 380 5.5E-69 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Amir_6211 1a8936e933151168a3e5799fb495d8c6 391 Pfam PF00924 Mechanosensitive ion channel 136 279 7.7E-25 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Amir_6211 1a8936e933151168a3e5799fb495d8c6 391 SUPERFAMILY SSF50182 174 239 1.37E-12 T 14-10-2018 IPR010920 LSM domain superfamily Amir_5394 7fba460680467d3a120852b3e359f2fb 195 Pfam PF14065 Protein of unknown function (DUF4255) 4 178 3.6E-46 T 14-10-2018 IPR025351 Protein of unknown function DUF4255 Amir_1247 6b9e2d21f7c818aabc01cc52d0f98db5 113 Pfam PF01230 HIT domain 13 107 1.5E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Amir_1247 6b9e2d21f7c818aabc01cc52d0f98db5 113 SUPERFAMILY SSF54197 1 110 5.26E-30 T 14-10-2018 IPR036265 HIT-like superfamily Amir_1247 6b9e2d21f7c818aabc01cc52d0f98db5 113 Gene3D G3DSA:3.30.428.10 1 109 1.9E-30 T 14-10-2018 IPR036265 HIT-like superfamily Amir_1247 6b9e2d21f7c818aabc01cc52d0f98db5 113 PRINTS PR00332 Histidine triad family signature 5 21 2.4E-14 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Amir_1247 6b9e2d21f7c818aabc01cc52d0f98db5 113 PRINTS PR00332 Histidine triad family signature 94 104 2.4E-14 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Amir_1247 6b9e2d21f7c818aabc01cc52d0f98db5 113 PRINTS PR00332 Histidine triad family signature 26 44 2.4E-14 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Amir_3865 41a4f291c994c341e2044afbb7300aac 376 Gene3D G3DSA:3.40.109.10 208 363 6.9E-13 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amir_5596 5e1cd8b5acc0ee25ed778ebb7440abe7 222 SUPERFAMILY SSF55811 6 136 3.05E-5 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amir_5303 4342dfd75eefacad56fec299f5a9e3d9 463 Pfam PF00106 short chain dehydrogenase 141 228 6.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5303 4342dfd75eefacad56fec299f5a9e3d9 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 157 1.1E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5303 4342dfd75eefacad56fec299f5a9e3d9 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 227 1.1E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5303 4342dfd75eefacad56fec299f5a9e3d9 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 374 393 1.1E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_5303 4342dfd75eefacad56fec299f5a9e3d9 463 SUPERFAMILY SSF51735 135 415 7.7E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_1967 d44a0852d2606c0aab9e3a3222941f7a 132 Pfam PF17240 Family of unknown function (DUF5313) 2 127 3.1E-22 T 14-10-2018 IPR035197 Protein of unknown function DUF5313 Amir_4550 64c2f94648e0ad1a37be8a7313c8c7a7 1040 Pfam PF15607 Bacterial toxin 44 905 997 5.6E-12 T 14-10-2018 IPR028946 Bacterial toxin 44 Amir_4550 64c2f94648e0ad1a37be8a7313c8c7a7 1040 Pfam PF03752 Short repeats of unknown function 466 505 1.2E-7 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_4550 64c2f94648e0ad1a37be8a7313c8c7a7 1040 Pfam PF03752 Short repeats of unknown function 605 645 1.4E-11 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_4550 64c2f94648e0ad1a37be8a7313c8c7a7 1040 Pfam PF03752 Short repeats of unknown function 6 46 1.3E-11 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_4550 64c2f94648e0ad1a37be8a7313c8c7a7 1040 Pfam PF03752 Short repeats of unknown function 52 92 6.8E-15 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_4550 64c2f94648e0ad1a37be8a7313c8c7a7 1040 Pfam PF03752 Short repeats of unknown function 512 550 6.3E-9 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_4550 64c2f94648e0ad1a37be8a7313c8c7a7 1040 Pfam PF03752 Short repeats of unknown function 559 599 1.9E-10 T 14-10-2018 IPR005506 Protein of unknown function DUF312 Amir_5159 10eb183d9d0cba1c2585871734ea0628 1320 SUPERFAMILY SSF52151 21 294 3.92E-18 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amir_5159 10eb183d9d0cba1c2585871734ea0628 1320 TIGRFAM TIGR03607 TIGR03607: patatin-related protein 21 721 1.5E-110 T 14-10-2018 IPR019894 Patatin-related protein Amir_5159 10eb183d9d0cba1c2585871734ea0628 1320 Pfam PF01734 Patatin-like phospholipase 26 285 3.3E-19 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Amir_5159 10eb183d9d0cba1c2585871734ea0628 1320 Pfam PF11856 Protein of unknown function (DUF3376) 649 805 2.9E-18 T 14-10-2018 IPR024282 Domain of unknown function DUF3376 Amir_2042 e1539fe875aed38c1cdfdc7bc60c61a6 142 SUPERFAMILY SSF50346 34 131 9.81E-17 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Amir_0461 31569341a1e13b5e33730d7eec90619a 202 Pfam PF03029 Conserved hypothetical ATP binding protein 26 194 2.9E-26 T 14-10-2018 IPR004130 GPN-loop GTPase Amir_0461 31569341a1e13b5e33730d7eec90619a 202 SUPERFAMILY SSF52540 20 194 2.37E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0461 31569341a1e13b5e33730d7eec90619a 202 Gene3D G3DSA:3.40.50.300 14 198 9.6E-18 T 14-10-2018 Amir_7060 0bbeed90a6a051f7f8579ecb157c1cc1 211 Pfam PF14430 Immunity protein Imm1 18 134 1.4E-19 T 14-10-2018 IPR025680 Immunity protein Imm1 Amir_6524 112472b7627310e0c58d36085ad455a4 136 Gene3D G3DSA:2.30.31.20 1 134 1.9E-42 T 14-10-2018 IPR038658 Sporulation-specific cell division protein SsgB superfamily Amir_6524 112472b7627310e0c58d36085ad455a4 136 Pfam PF04686 Streptomyces sporulation and cell division protein, SsgA 24 119 1.6E-29 T 14-10-2018 IPR006776 Sporulation-specific cell division protein SsgB GO:0051301 Amir_5972 a4bc1fa3a125ff8a408ace3bb5359beb 115 Pfam PF14428 SCP1.201-like deaminase 9 98 2.0E-20 T 14-10-2018 IPR032724 Deaminase, SCP1.201-like Amir_1308 4c2e3557fd1fd271b1e55f590375b486 189 SUPERFAMILY SSF46785 45 181 8.37E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_1308 4c2e3557fd1fd271b1e55f590375b486 189 Gene3D G3DSA:1.10.10.10 47 186 1.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_1308 4c2e3557fd1fd271b1e55f590375b486 189 Pfam PF12802 MarR family 75 132 8.6E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_1308 4c2e3557fd1fd271b1e55f590375b486 189 ProSitePatterns PS01117 MarR-type HTH domain signature. 108 142 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Amir_1308 4c2e3557fd1fd271b1e55f590375b486 189 SMART SM00347 69 169 2.3E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amir_0740 db642454e4de28538d9eca01aa84350c 117 Gene3D G3DSA:2.60.20.30 29 117 5.0E-6 T 14-10-2018 IPR015791 Antimicrobial/protein inhibitor, gamma-crystallin-like Amir_0740 db642454e4de28538d9eca01aa84350c 117 Pfam PF09076 Beta/Gamma crystallin 46 115 7.7E-28 T 14-10-2018 IPR015161 Streptomyces killer toxin-like, beta/gamma crystallin Amir_4718 2c9fa29cd1db4950998716103f8a8389 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 314 1.0E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_4718 2c9fa29cd1db4950998716103f8a8389 318 SUPERFAMILY SSF161098 109 299 3.92E-25 T 14-10-2018 IPR035906 MetI-like superfamily Amir_4718 2c9fa29cd1db4950998716103f8a8389 318 Gene3D G3DSA:1.10.3720.10 103 313 2.8E-24 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2238 cc1e3832902d1d057511ff3d2ac5b31e 822 Pfam PF02687 FtsX-like permease family 725 815 3.1E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amir_6317 136f6abbe3eaf4c06b3709bc0a9388d5 254 Pfam PF13471 Transglutaminase-like superfamily 129 244 8.0E-20 T 14-10-2018 IPR032708 Microcin J25-processing protein McjB, C-terminal Amir_4823 5ebf4a77de15895af69b2ca2f443a0f3 242 Gene3D G3DSA:1.10.3630.10 15 234 3.6E-17 T 14-10-2018 IPR038261 Golgi phosphoprotein 3-like domain superfamily Amir_4823 5ebf4a77de15895af69b2ca2f443a0f3 242 Pfam PF05719 Golgi phosphoprotein 3 (GPP34) 22 220 5.6E-42 T 14-10-2018 IPR008628 Golgi phosphoprotein 3-like GO:0070273 Amir_4030 9c5e31d0b7dff78c6921ef1be4aab563 298 SUPERFAMILY SSF89372 23 226 8.5E-45 T 14-10-2018 Amir_4030 9c5e31d0b7dff78c6921ef1be4aab563 298 Pfam PF03984 Repeat of unknown function (DUF346) 104 137 1.5E-6 T 14-10-2018 IPR007132 Protein of unknown function DUF346 Amir_4030 9c5e31d0b7dff78c6921ef1be4aab563 298 Pfam PF03984 Repeat of unknown function (DUF346) 148 183 2.4E-5 T 14-10-2018 IPR007132 Protein of unknown function DUF346 Amir_4030 9c5e31d0b7dff78c6921ef1be4aab563 298 Pfam PF03984 Repeat of unknown function (DUF346) 238 273 1.6E-7 T 14-10-2018 IPR007132 Protein of unknown function DUF346 Amir_0071 27a1fb7dff0b0e7caa3c4fa079fab36a 528 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 446 2.3E-60 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Amir_0071 27a1fb7dff0b0e7caa3c4fa079fab36a 528 Gene3D G3DSA:1.20.1730.10 23 497 2.3E-58 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Amir_0071 27a1fb7dff0b0e7caa3c4fa079fab36a 528 Pfam PF00474 Sodium:solute symporter family 36 447 4.1E-94 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Amir_4496 f07e38497001d8fcba8a1d7a9293d5fc 230 Gene3D G3DSA:3.10.129.10 101 228 3.4E-11 T 14-10-2018 Amir_4496 f07e38497001d8fcba8a1d7a9293d5fc 230 SUPERFAMILY SSF54637 92 222 1.63E-13 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_1136 ae0d83d13a1455f3383a6bcae31dbfaa 325 Gene3D G3DSA:3.30.70.100 207 295 1.9E-20 T 14-10-2018 Amir_1136 ae0d83d13a1455f3383a6bcae31dbfaa 325 SUPERFAMILY SSF50182 139 197 6.54E-12 T 14-10-2018 IPR010920 LSM domain superfamily Amir_1136 ae0d83d13a1455f3383a6bcae31dbfaa 325 SUPERFAMILY SSF82689 204 297 3.14E-10 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Amir_1136 ae0d83d13a1455f3383a6bcae31dbfaa 325 SUPERFAMILY SSF82861 84 138 2.09E-11 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Amir_1136 ae0d83d13a1455f3383a6bcae31dbfaa 325 Gene3D G3DSA:2.30.30.60 155 204 1.9E-18 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Amir_1136 ae0d83d13a1455f3383a6bcae31dbfaa 325 Pfam PF00924 Mechanosensitive ion channel 97 296 1.1E-37 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Amir_5678 40a10b04311958703c96f6b8b6e4d052 221 Pfam PF09335 SNARE associated Golgi protein 40 163 1.6E-21 T 14-10-2018 IPR032816 SNARE associated Golgi protein Amir_6365 3e25d6af11b2799dac925d96125b9bcc 492 SUPERFAMILY SSF52540 32 351 3.66E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0040 db8753ad5d68dcf02b31c3cf6cc859d6 339 Pfam PF05425 Copper resistance protein D 230 333 1.7E-17 T 14-10-2018 IPR008457 Copper resistance protein D GO:0016021 Amir_1707 1f51c7054c530282e24e74c90ae30bd0 294 Gene3D G3DSA:2.170.16.10 9 106 3.2E-8 T 14-10-2018 Amir_1707 1f51c7054c530282e24e74c90ae30bd0 294 SUPERFAMILY SSF51294 14 270 1.41E-8 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amir_5051 23e3aa5c0e8338c505127309e1ed67c2 559 Pfam PF13751 Transposase DDE domain 415 535 4.6E-28 T 14-10-2018 IPR025668 Transposase DDE domain Amir_5051 23e3aa5c0e8338c505127309e1ed67c2 559 Pfam PF05598 Transposase domain (DUF772) 64 138 7.4E-17 T 14-10-2018 IPR008490 Transposase InsH, N-terminal Amir_0138 a0e9c40b4fc5a01776a5ff02b2cd1127 492 Pfam PF15521 Novel toxin 11 262 485 2.1E-38 T 14-10-2018 IPR029121 Novel toxin 11 Amir_4337 eb6cb57969efc9dd9d75b61982fbf2e7 295 Pfam PF03741 Integral membrane protein TerC family 15 201 4.9E-48 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 Amir_2426 2b970133350b5362163cdc574a99677e 269 Gene3D G3DSA:1.10.287.70 117 227 1.7E-29 T 14-10-2018 Amir_2426 2b970133350b5362163cdc574a99677e 269 Pfam PF00520 Ion transport protein 15 224 2.1E-44 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 Amir_2426 2b970133350b5362163cdc574a99677e 269 Gene3D G3DSA:1.20.120.350 4 116 5.8E-28 T 14-10-2018 IPR027359 Voltage-dependent channel domain superfamily Amir_2426 2b970133350b5362163cdc574a99677e 269 SUPERFAMILY SSF81324 14 224 2.35E-33 T 14-10-2018 Amir_3955 35ff53a75d23b7a1afc63f67da4c1702 135 SUPERFAMILY SSF55874 47 131 5.16E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3955 35ff53a75d23b7a1afc63f67da4c1702 135 Gene3D G3DSA:3.30.565.10 10 135 9.6E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_3955 35ff53a75d23b7a1afc63f67da4c1702 135 Pfam PF13581 Histidine kinase-like ATPase domain 25 128 1.1E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5025 74e41d2436586ada473c0bad5e8d0d77 408 SUPERFAMILY SSF53448 10 364 1.04E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_5025 74e41d2436586ada473c0bad5e8d0d77 408 Gene3D G3DSA:3.90.550.10 2 271 2.5E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_5025 74e41d2436586ada473c0bad5e8d0d77 408 Pfam PF00535 Glycosyl transferase family 2 10 145 4.9E-8 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_1114 2e2449bfaf80e12761ad6211fcba203a 140 Pfam PF02467 Transcription factor WhiB 61 130 2.1E-19 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain Amir_2495 e60c02fd059402fd7b1e2a6a53b0803e 104 Pfam PF00550 Phosphopantetheine attachment site 31 80 4.3E-6 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amir_2495 e60c02fd059402fd7b1e2a6a53b0803e 104 Gene3D G3DSA:1.10.1200.10 10 98 3.3E-10 T 14-10-2018 IPR036736 ACP-like superfamily Amir_2495 e60c02fd059402fd7b1e2a6a53b0803e 104 SUPERFAMILY SSF47336 25 102 1.31E-9 T 14-10-2018 IPR036736 ACP-like superfamily Amir_3906 83ce1bbada2ddac6702d929c797a4dae 88 Gene3D G3DSA:2.130.10.10 5 88 3.1E-10 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amir_3906 83ce1bbada2ddac6702d929c797a4dae 88 SUPERFAMILY SSF50998 16 84 1.33E-9 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Amir_3906 83ce1bbada2ddac6702d929c797a4dae 88 Pfam PF13570 PQQ-like domain 18 45 0.0019 T 14-10-2018 IPR025666 Pyrrolo-quinoline quinone-like domain Amir_3528 4e39f28e739ddbd40a63b53b780d90d1 375 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 28 121 1.2E-7 T 14-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain Amir_3528 4e39f28e739ddbd40a63b53b780d90d1 375 PIRSF PIRSF035009 1 370 5.7E-135 T 14-10-2018 IPR017035 Uncharacterised conserved protein UCP035009, HsdR, All3000-type Amir_4836 35c676cb2d61c4fd7cfcdea4c59c6dd5 244 Pfam PF00535 Glycosyl transferase family 2 10 137 2.5E-27 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amir_4836 35c676cb2d61c4fd7cfcdea4c59c6dd5 244 SUPERFAMILY SSF53448 5 224 1.59E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_4836 35c676cb2d61c4fd7cfcdea4c59c6dd5 244 Gene3D G3DSA:3.90.550.10 1 234 1.7E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amir_4283 636c0033f6bfd8a1c23b665935de8d6a 124 Pfam PF01022 Bacterial regulatory protein, arsR family 33 76 1.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_4283 636c0033f6bfd8a1c23b665935de8d6a 124 SUPERFAMILY SSF46785 15 102 1.72E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4283 636c0033f6bfd8a1c23b665935de8d6a 124 SMART SM00418 25 103 3.4E-26 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_4283 636c0033f6bfd8a1c23b665935de8d6a 124 Gene3D G3DSA:1.10.10.10 2 119 4.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_4283 636c0033f6bfd8a1c23b665935de8d6a 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 74 89 1.7E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_4283 636c0033f6bfd8a1c23b665935de8d6a 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 42 1.7E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_4283 636c0033f6bfd8a1c23b665935de8d6a 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 1.7E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amir_6802 74b37ac88dfafdc8e88cd9bbf402354a 282 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 16 248 8.2E-44 T 14-10-2018 IPR018713 Domain of unknown function DUF2236 Amir_1229 ea1fad03c3c0cb7950059db6a8fea630 73 SUPERFAMILY SSF143100 6 62 9.55E-10 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like Amir_1229 ea1fad03c3c0cb7950059db6a8fea630 73 Gene3D G3DSA:3.30.160.250 7 70 3.3E-7 T 14-10-2018 Amir_2761 50e6dc7a813c0c583083e57c98a5cb64 142 Gene3D G3DSA:2.30.110.10 1 138 6.3E-22 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amir_2761 50e6dc7a813c0c583083e57c98a5cb64 142 SUPERFAMILY SSF50475 8 139 3.37E-20 T 14-10-2018 Amir_2761 50e6dc7a813c0c583083e57c98a5cb64 142 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 10 91 6.3E-11 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amir_5427 0cae6305b162b643ddaf0ab06f271770 311 Pfam PF02616 Segregation and condensation protein ScpA 70 290 2.0E-60 T 14-10-2018 IPR003768 Segregation and condensation protein A Amir_1834 1479253524d148d19e790b8077d1c1c4 59 Pfam PF04149 Domain of unknown function (DUF397) 5 57 2.9E-23 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_6174 25054bab99d0df62b021341cb50f9f9d 293 SUPERFAMILY SSF51679 1 288 3.01E-51 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_6174 25054bab99d0df62b021341cb50f9f9d 293 Pfam PF00296 Luciferase-like monooxygenase 7 206 2.2E-45 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Amir_6174 25054bab99d0df62b021341cb50f9f9d 293 Gene3D G3DSA:3.20.20.30 1 255 1.7E-54 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Amir_3474 592ed0a292b94dc092774b8fd1a5e049 280 SUPERFAMILY SSF161098 12 278 3.55E-59 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3474 592ed0a292b94dc092774b8fd1a5e049 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 274 5.5E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_3474 592ed0a292b94dc092774b8fd1a5e049 280 Gene3D G3DSA:1.10.3720.10 4 272 1.8E-52 T 14-10-2018 IPR035906 MetI-like superfamily Amir_3832 f5a50ffc4c7c35f4c452bd9b6a0c5631 395 Pfam PF01040 UbiA prenyltransferase family 120 356 2.5E-16 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Amir_3452 d26b88230393a3e026c3a376ba871458 188 TIGRFAM TIGR03847 TIGR03847: conserved hypothetical protein 5 180 3.0E-82 T 14-10-2018 IPR021441 Protein of unknown function DUF3090 Amir_3452 d26b88230393a3e026c3a376ba871458 188 Pfam PF11290 Protein of unknown function (DUF3090) 6 176 2.3E-72 T 14-10-2018 IPR021441 Protein of unknown function DUF3090 Amir_4012 0bf024f47827e26b83f8d4cc71a26ebe 423 SUPERFAMILY SSF48371 42 238 7.98E-30 T 14-10-2018 IPR016024 Armadillo-type fold Amir_4012 0bf024f47827e26b83f8d4cc71a26ebe 423 Gene3D G3DSA:1.25.40.290 121 237 1.5E-29 T 14-10-2018 Amir_1537 492f7f71c0a1dfc18a1f89b4de4cce84 228 Gene3D G3DSA:1.10.10.10 5 55 3.9E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_3862 7d3ef64ae6a4455cd15a103336bd842b 362 Pfam PF14028 Lantibiotic biosynthesis dehydratase C-term 8 246 7.2E-13 T 14-10-2018 IPR023809 Thiopeptide-type bacteriocin biosynthesis domain Amir_2947 e43e8e3cebe9c4d1f763b618567da931 135 SUPERFAMILY SSF160719 21 128 2.48E-34 T 14-10-2018 Amir_2947 e43e8e3cebe9c4d1f763b618567da931 135 Gene3D G3DSA:3.10.450.40 1 129 3.8E-47 T 14-10-2018 Amir_2947 e43e8e3cebe9c4d1f763b618567da931 135 Pfam PF04965 Gene 25-like lysozyme 26 115 8.8E-26 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD Amir_6325 d1b631568c88a50cf50ec674f1e69cdb 358 SUPERFAMILY SSF53697 64 346 4.45E-46 T 14-10-2018 Amir_6325 d1b631568c88a50cf50ec674f1e69cdb 358 Pfam PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain 200 346 1.5E-7 T 14-10-2018 IPR019490 Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase, C-terminal GO:0004347|GO:0004476|GO:0005975 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00051+5.3.1.8|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.8+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 Amir_4820 8977f0940fbfd45e1e5e0faa21145716 300 Pfam PF14100 Methane oxygenase PmoA 16 289 1.3E-73 T 14-10-2018 IPR029475 Methane oxygenase PmoA Amir_2722 dbd21c0932fb2794e93c01e75a39643e 332 Gene3D G3DSA:1.10.3470.10 10 330 3.8E-78 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_2722 dbd21c0932fb2794e93c01e75a39643e 332 SUPERFAMILY SSF81345 12 326 2.75E-65 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_2722 dbd21c0932fb2794e93c01e75a39643e 332 Pfam PF01032 FecCD transport family 23 326 1.2E-78 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_5433 f0efa40cd77ae3397a3f2ad1e16070fc 141 Pfam PF10825 Protein of unknown function (DUF2752) 49 97 2.4E-19 T 14-10-2018 IPR021215 Protein of unknown function DUF2752 Amir_3734 5ef15d8c5c99640820e1730b2d9a53ea 213 Pfam PF01636 Phosphotransferase enzyme family 2 99 1.7E-10 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Amir_3734 5ef15d8c5c99640820e1730b2d9a53ea 213 SUPERFAMILY SSF56112 3 173 5.03E-21 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_3823 140184d1f0473c88533061cdfb9cb720 390 Pfam PF01594 AI-2E family transporter 37 347 6.6E-58 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like Amir_5393 62dd0a1807ea8a8ed73a97ecdd8358aa 682 Gene3D G3DSA:3.40.50.300 399 600 3.8E-39 T 14-10-2018 Amir_5393 62dd0a1807ea8a8ed73a97ecdd8358aa 682 SUPERFAMILY SSF52540 414 640 9.53E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_5393 62dd0a1807ea8a8ed73a97ecdd8358aa 682 SMART SM00382 458 590 3.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Amir_5393 62dd0a1807ea8a8ed73a97ecdd8358aa 682 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 463 587 3.7E-23 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amir_6455 f26bf9d6f2e0ed690449aad2b9ec0fcb 174 Pfam PF02575 YbaB/EbfC DNA-binding family 13 97 9.2E-12 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_6455 f26bf9d6f2e0ed690449aad2b9ec0fcb 174 SUPERFAMILY SSF82607 8 93 3.79E-9 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_6455 f26bf9d6f2e0ed690449aad2b9ec0fcb 174 Gene3D G3DSA:3.30.1310.10 4 106 8.1E-9 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_6852 929d2bc893776c384cdec272cb956a10 284 Pfam PF01261 Xylose isomerase-like TIM barrel 29 233 1.1E-27 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Amir_6852 929d2bc893776c384cdec272cb956a10 284 SUPERFAMILY SSF51658 22 282 1.2E-46 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Amir_6852 929d2bc893776c384cdec272cb956a10 284 Gene3D G3DSA:3.20.20.150 1 283 1.5E-65 T 14-10-2018 Amir_6792 1b7d9d05313cc2be3c3cf6f9da34bc4c 180 Gene3D G3DSA:1.10.1780.10 2 177 3.8E-32 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Amir_6792 1b7d9d05313cc2be3c3cf6f9da34bc4c 180 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 131 175 0.0028 T 14-10-2018 IPR004176 Clp, N-terminal Amir_6792 1b7d9d05313cc2be3c3cf6f9da34bc4c 180 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 42 0.0037 T 14-10-2018 IPR004176 Clp, N-terminal Amir_6792 1b7d9d05313cc2be3c3cf6f9da34bc4c 180 SUPERFAMILY SSF81923 4 178 1.84E-15 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Amir_4082 e688cf3b4bbb5bbc4d536567ee560820 152 SUPERFAMILY SSF54637 4 139 1.34E-25 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_4082 e688cf3b4bbb5bbc4d536567ee560820 152 Gene3D G3DSA:3.10.129.10 1 148 5.3E-40 T 14-10-2018 Amir_4082 e688cf3b4bbb5bbc4d536567ee560820 152 Pfam PF13279 Thioesterase-like superfamily 11 135 3.8E-8 T 14-10-2018 Amir_5037 953b1042f19aba5fb9fa4d4741241831 73 Pfam PF04149 Domain of unknown function (DUF397) 7 72 6.0E-20 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_2470 63b345e4a21c85f3d7f6df076ab67f1a 215 Pfam PF14016 Protein of unknown function (DUF4232) 75 206 3.0E-31 T 14-10-2018 IPR025326 Protein of unknown function DUF4232 Amir_3362 3737962e09181250161c5ab142c6ebd0 186 Gene3D G3DSA:3.40.430.10 2 183 1.1E-41 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_3362 3737962e09181250161c5ab142c6ebd0 186 Pfam PF01872 RibD C-terminal domain 2 180 1.6E-21 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Amir_3362 3737962e09181250161c5ab142c6ebd0 186 SUPERFAMILY SSF53597 2 183 3.93E-31 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amir_2627 0c13a095005e3994cd69da97b22eede3 288 SUPERFAMILY SSF161098 83 264 1.13E-26 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2627 0c13a095005e3994cd69da97b22eede3 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 270 8.1E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_2627 0c13a095005e3994cd69da97b22eede3 288 Gene3D G3DSA:1.10.3720.10 81 278 6.1E-22 T 14-10-2018 IPR035906 MetI-like superfamily Amir_1167 b66ecb00243c0566257aa08720da6193 151 Pfam PF14017 Protein of unknown function (DUF4233) 20 123 6.7E-23 T 14-10-2018 IPR025327 Protein of unknown function DUF4233 Amir_6912 55bfe6279cd8de9b2e9de885f31def6a 328 SUPERFAMILY SSF49899 95 323 1.58E-22 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_6912 55bfe6279cd8de9b2e9de885f31def6a 328 Pfam PF00722 Glycosyl hydrolases family 16 96 193 3.9E-9 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 Amir_0151 86583566630bb3a30e8c8a8ef27d5da6 252 Pfam PF14011 EspG family 10 245 2.0E-48 T 14-10-2018 IPR025734 EspG family Amir_5506 2d411c6cdec5331c417b06458011516f 395 Pfam PF09594 Glycosyltransferase family 87 67 297 2.0E-52 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 Amir_5896 e73d2eaa370f480ee778d9502bbad1ee 282 SUPERFAMILY SSF161098 20 273 5.36E-50 T 14-10-2018 IPR035906 MetI-like superfamily Amir_5896 e73d2eaa370f480ee778d9502bbad1ee 282 Gene3D G3DSA:1.10.3720.10 9 279 7.9E-48 T 14-10-2018 IPR035906 MetI-like superfamily Amir_5896 e73d2eaa370f480ee778d9502bbad1ee 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 273 5.8E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_0946 6835b9ac0656a945a6bc0d7d67612617 300 Gene3D G3DSA:3.30.70.3040 43 160 1.2E-35 T 14-10-2018 Amir_0946 6835b9ac0656a945a6bc0d7d67612617 300 Pfam PF02687 FtsX-like permease family 203 291 8.0E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amir_0946 6835b9ac0656a945a6bc0d7d67612617 300 PIRSF PIRSF003097 1 300 2.6E-68 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Amir_4520 39220b4f6a4ed4d958f4c32599d8c199 259 Pfam PF14011 EspG family 8 253 2.3E-65 T 14-10-2018 IPR025734 EspG family Amir_0334 1ebc318dbe735bd71bb793b1a884a4d3 271 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 247 267 2.7E-7 T 14-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 Amir_1516 2dc48cf8112bc32e14b1ade5701027cc 207 Pfam PF12502 Protein of unknown function (DUF3710) 31 198 6.8E-58 T 14-10-2018 IPR022183 Protein of unknown function DUF3710 Amir_5058 1a43ae612f9489d757ea2273c9e22378 468 SUPERFAMILY SSF103473 31 463 1.7E-58 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_5058 1a43ae612f9489d757ea2273c9e22378 468 Pfam PF00083 Sugar (and other) transporter 77 463 1.0E-32 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Amir_2111 4491bfc698e7b2898c9a3391823814ff 175 Pfam PF14081 Domain of unknown function (DUF4262) 27 148 2.9E-33 T 14-10-2018 IPR025358 Protein of unknown function DUF4262 Amir_1040 f236b1ba3a33182ca9788ee1f25cc362 364 Pfam PF13407 Periplasmic binding protein domain 36 296 2.8E-51 T 14-10-2018 IPR025997 Periplasmic binding protein Amir_1040 f236b1ba3a33182ca9788ee1f25cc362 364 SUPERFAMILY SSF53822 34 300 1.88E-53 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Amir_1040 f236b1ba3a33182ca9788ee1f25cc362 364 Gene3D G3DSA:3.40.50.2300 36 323 1.4E-77 T 14-10-2018 Amir_1040 f236b1ba3a33182ca9788ee1f25cc362 364 Gene3D G3DSA:3.40.50.2300 138 333 1.4E-77 T 14-10-2018 Amir_0460 3bda89a025ec5e4764afba6ab13d93ed 182 Pfam PF05331 Protein of unknown function (DUF742) 70 182 1.1E-32 T 14-10-2018 IPR007995 Protein of unknown function DUF742 Amir_0070 c89a2f30e2440c16bf39af2964802b0c 118 Pfam PF04341 Protein of unknown function, DUF485 24 110 6.9E-35 T 14-10-2018 IPR007436 Protein of unknown function DUF485 Amir_1281 90ce5e18c0208416e48628d9830fb6cd 419 Gene3D G3DSA:1.25.40.10 198 419 9.8E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_1281 90ce5e18c0208416e48628d9830fb6cd 419 SUPERFAMILY SSF47413 60 125 9.01E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1281 90ce5e18c0208416e48628d9830fb6cd 419 Gene3D G3DSA:1.10.260.40 50 124 3.3E-10 T 14-10-2018 Amir_1281 90ce5e18c0208416e48628d9830fb6cd 419 Pfam PF13560 Helix-turn-helix domain 61 116 4.3E-8 T 14-10-2018 Amir_1281 90ce5e18c0208416e48628d9830fb6cd 419 SMART SM00530 63 119 2.0E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_4303 4d6e49d7236250fcda98218e66cef33d 242 SUPERFAMILY SSF53335 62 184 1.6E-11 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_4303 4d6e49d7236250fcda98218e66cef33d 242 Gene3D G3DSA:3.40.50.150 29 191 7.7E-10 T 14-10-2018 Amir_0483 6eebcc60a0a3bc68c7dc7235543fc34c 576 Pfam PF07690 Major Facilitator Superfamily 162 503 2.3E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_0483 6eebcc60a0a3bc68c7dc7235543fc34c 576 SUPERFAMILY SSF103473 164 554 8.76E-22 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_5364 6547dd1c953fee214fe19dea5316a9be 99 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 95 19.338 T 14-10-2018 IPR003482 Transcription factor WhiB Amir_5364 6547dd1c953fee214fe19dea5316a9be 99 Pfam PF02467 Transcription factor WhiB 17 87 3.6E-24 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain Amir_2836 9f1bd98e241de76c27508a9bde6605d5 614 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 57 558 1.0E-145 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 Amir_2836 9f1bd98e241de76c27508a9bde6605d5 614 SUPERFAMILY SSF48208 112 396 1.36E-16 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_2583 42cca2d110c39b34cc678635b3118393 144 SUPERFAMILY SSF160424 10 142 3.01E-30 T 14-10-2018 IPR036170 Probable antitoxin YezG superfamily Amir_1739 ac517994094bab1ed4111ac45bc5071e 465 Pfam PF04932 O-Antigen ligase 225 361 1.5E-6 T 14-10-2018 IPR007016 O-antigen ligase-related Amir_2476 36bb208b4d2fa1aefbe578ae8ad48701 334 Pfam PF03741 Integral membrane protein TerC family 70 273 2.7E-51 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 Amir_2476 36bb208b4d2fa1aefbe578ae8ad48701 334 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 312 1.7E-113 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 Amir_7036 9061ad3c24afc15f64aaddbea103b06b 465 Pfam PF05007 Mannosyltransferase (PIG-M) 206 375 6.5E-7 T 14-10-2018 IPR007704 GPI mannosyltransferase 1 GO:0006506|GO:0016021|GO:0016758 Reactome: R-HSA-162710 Amir_7036 9061ad3c24afc15f64aaddbea103b06b 465 PIRSF PIRSF010361 6 463 5.0E-70 T 14-10-2018 IPR016570 Uncharacterised conserved protein UCP010361, membrane Amir_1835 80c7757d8cf53bfc0d254df95a17ed01 284 Gene3D G3DSA:1.10.260.40 8 84 2.2E-7 T 14-10-2018 Amir_1835 80c7757d8cf53bfc0d254df95a17ed01 284 SUPERFAMILY SSF47413 10 69 3.85E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1835 80c7757d8cf53bfc0d254df95a17ed01 284 SMART SM00530 18 73 0.0034 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_1835 80c7757d8cf53bfc0d254df95a17ed01 284 Pfam PF13560 Helix-turn-helix domain 14 75 3.6E-12 T 14-10-2018 Amir_4512 cb380eeeb2f3cc9eaa54641066676f8e 217 Pfam PF04892 VanZ like family 96 199 5.4E-15 T 14-10-2018 IPR006976 VanZ-like Amir_1922 0a0a3b88914d761bb64ffbbcb7ee4cea 685 Pfam PF01757 Acyltransferase family 23 349 3.5E-28 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Amir_5093 dc8405cd1d247a308252288e766ce556 132 Gene3D G3DSA:3.30.565.10 5 130 3.9E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_5093 dc8405cd1d247a308252288e766ce556 132 Pfam PF13581 Histidine kinase-like ATPase domain 14 123 2.6E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_5093 dc8405cd1d247a308252288e766ce556 132 SUPERFAMILY SSF55874 38 128 1.57E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_2189 1ecb6f2b1fe5957fc538ed1086db6bd4 454 Gene3D G3DSA:1.20.1260.20 26 121 3.3E-7 T 14-10-2018 IPR038332 PPE superfamily Amir_2189 1ecb6f2b1fe5957fc538ed1086db6bd4 454 SUPERFAMILY SSF140459 39 175 1.44E-6 T 14-10-2018 Amir_2189 1ecb6f2b1fe5957fc538ed1086db6bd4 454 Pfam PF00823 PPE family 39 115 6.5E-7 T 14-10-2018 IPR000030 PPE family Amir_2192 78be3821bb0d50c1a5f014e25fd5b6f6 461 Gene3D G3DSA:3.40.50.300 39 249 1.3E-29 T 14-10-2018 Amir_2192 78be3821bb0d50c1a5f014e25fd5b6f6 461 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 179 232 5.3E-5 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Amir_2192 78be3821bb0d50c1a5f014e25fd5b6f6 461 SUPERFAMILY SSF52540 40 341 1.45E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_0026 734e9dc66a6402ba57cff5282696bc58 154 Pfam PF00498 FHA domain 83 146 5.3E-17 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Amir_0026 734e9dc66a6402ba57cff5282696bc58 154 SMART SM00240 81 131 4.3E-13 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Amir_0026 734e9dc66a6402ba57cff5282696bc58 154 Gene3D G3DSA:2.60.200.20 47 154 6.8E-28 T 14-10-2018 Amir_0026 734e9dc66a6402ba57cff5282696bc58 154 SUPERFAMILY SSF49879 57 153 2.3E-26 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Amir_4946 901e2b95dc0f1310fd70b7cfb7c14385 296 SUPERFAMILY SSF49899 70 274 2.69E-27 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amir_4946 901e2b95dc0f1310fd70b7cfb7c14385 296 Pfam PF01828 Peptidase A4 family 72 266 3.1E-26 T 14-10-2018 IPR000250 Peptidase G1 GO:0004190|GO:0006508 Amir_4946 901e2b95dc0f1310fd70b7cfb7c14385 296 Gene3D G3DSA:2.60.120.700 70 270 3.8E-21 T 14-10-2018 IPR038656 Peptidase G1 superfamily Amir_6633 cce2ccdd5d56548ed3f9a5dc0dfc781a 279 Pfam PF02405 Permease MlaE 62 266 4.9E-59 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Amir_3814 06bc1b162bedfb03a74381f39b940d69 230 Gene3D G3DSA:3.40.50.150 19 229 8.5E-37 T 14-10-2018 Amir_3814 06bc1b162bedfb03a74381f39b940d69 230 SUPERFAMILY SSF53335 9 212 4.91E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_3814 06bc1b162bedfb03a74381f39b940d69 230 Pfam PF01209 ubiE/COQ5 methyltransferase family 6 215 5.5E-20 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Amir_2768 b2921aad4e03d3848754a0d55761795c 216 SUPERFAMILY SSF69318 25 155 3.27E-6 T 14-10-2018 Amir_0834 5bf2f568a218333ad044d9528d7df088 272 TIGRFAM TIGR02569 TIGR02569_actnb: TIGR02569 family protein 13 268 1.2E-80 T 14-10-2018 IPR013402 Conserved hypothetical protein CHP02569 Amir_0834 5bf2f568a218333ad044d9528d7df088 272 Gene3D G3DSA:3.90.1200.10 102 221 2.0E-5 T 14-10-2018 Amir_0834 5bf2f568a218333ad044d9528d7df088 272 SUPERFAMILY SSF56112 51 219 3.4E-12 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_5644 1917ad01e02960a6295dd022772a701a 352 SUPERFAMILY SSF52266 8 336 1.83E-7 T 14-10-2018 Amir_5329 700ac77ade743dde1b9092131a89a889 205 Pfam PF14014 Protein of unknown function (DUF4230) 47 197 1.8E-30 T 14-10-2018 IPR025324 Protein of unknown function DUF4230 Amir_5332 0f00d99496d52f793c00075342d1d406 302 Gene3D G3DSA:3.30.2350.10 83 297 4.0E-42 T 14-10-2018 Amir_5332 0f00d99496d52f793c00075342d1d406 302 Pfam PF00849 RNA pseudouridylate synthase 100 245 1.1E-16 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_5332 0f00d99496d52f793c00075342d1d406 302 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 138 152 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_5332 0f00d99496d52f793c00075342d1d406 302 SUPERFAMILY SSF55120 85 296 1.49E-49 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amir_6998 41c17e9cd05a16a2bd1faa011316eef0 92 Pfam PF11755 Protein of unknown function (DUF3311) 20 72 2.2E-14 T 14-10-2018 IPR021741 Protein of unknown function DUF3311 Amir_3638 d03ebd142de4cb74d5755162f7bdf70d 115 Gene3D G3DSA:2.60.120.10 25 112 3.1E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Amir_3638 d03ebd142de4cb74d5755162f7bdf70d 115 SUPERFAMILY SSF51182 17 113 1.15E-8 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_3858 4e36fb7fdb692edefd1d525c6948030f 151 Gene3D G3DSA:3.10.180.10 2 151 5.6E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_3858 4e36fb7fdb692edefd1d525c6948030f 151 SUPERFAMILY SSF54593 4 151 9.63E-14 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_6773 c3b82ccb33c1cd73f3408b4c38c03a4f 194 ProDom PD082580 HEPARIN-BINDING HEMAGGLUTININ ADHESIN GLYCOPROTEIN DIRECT VIRULENCE SEQUENCING CELL ADHESION HOMOLOG 46 143 5.0E-10 T 14-10-2018 IPR020340 Heparin-binding haemagglutinin, bacteria GO:0007155|GO:0008201|GO:0009405|GO:0009986 Amir_6159 d1ce2b085fa789796b9f0e2dd45761f9 289 Pfam PF11303 Protein of unknown function (DUF3105) 92 218 3.5E-44 T 14-10-2018 IPR021454 Protein of unknown function DUF3105 Amir_4568 dafc78b9b9cfd794e22e5d1af4f83b8e 318 Pfam PF14022 Protein of unknown function (DUF4238) 3 257 1.5E-15 T 14-10-2018 IPR025332 Protein of unknown function DUF4238 Amir_4808 90056c886008087a506349a98f937803 298 SUPERFAMILY SSF51735 1 266 1.8E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4808 90056c886008087a506349a98f937803 298 Pfam PF13460 NAD(P)H-binding 7 155 1.3E-11 T 14-10-2018 IPR016040 NAD(P)-binding domain Amir_4808 90056c886008087a506349a98f937803 298 Gene3D G3DSA:3.40.50.720 1 294 1.9E-29 T 14-10-2018 Amir_6744 e6995fb2337d92b4b824984ef5e67b70 268 Pfam PF13622 Thioesterase-like superfamily 22 263 3.0E-36 T 14-10-2018 Amir_6744 e6995fb2337d92b4b824984ef5e67b70 268 SUPERFAMILY SSF54637 3 112 1.77E-12 T 14-10-2018 IPR029069 HotDog domain superfamily Amir_6744 e6995fb2337d92b4b824984ef5e67b70 268 Gene3D G3DSA:3.10.129.90 1 265 1.0E-62 T 14-10-2018 Amir_3270 cd6035a1d72005c7492c3a8afcb70dd4 356 Pfam PF06067 Domain of unknown function (DUF932) 215 331 4.5E-8 T 14-10-2018 IPR026325 Protein of unknown function DUF932 Amir_3950 b8992215e719966f60fb4538df5b6f32 236 Pfam PF14011 EspG family 7 231 2.0E-30 T 14-10-2018 IPR025734 EspG family Amir_5222 6a9012725dddaba3c878507c57719848 181 Pfam PF02441 Flavoprotein 29 163 1.6E-11 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Amir_5222 6a9012725dddaba3c878507c57719848 181 SUPERFAMILY SSF52507 27 165 5.1E-20 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Amir_5222 6a9012725dddaba3c878507c57719848 181 Gene3D G3DSA:3.40.50.1950 21 180 9.3E-17 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Amir_1505 ea91a5cd0b1d19d2b435e0e5877e5037 496 Pfam PF02653 Branched-chain amino acid transport system / permease component 179 480 3.5E-31 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amir_1329 7f40b8ed5bcfcefba0281285e98f466a 297 Pfam PF05552 Conserved TM helix 11 55 4.6E-12 T 14-10-2018 IPR008910 Conserved TM helix Amir_2084 09bee43f9ddb042f71a810f5e41b9050 281 Pfam PF13349 Putative adhesin 18 279 2.3E-8 T 14-10-2018 IPR025164 Putative adhesin Amir_6163 41ab7d0c3089a80a322fdf055029c2da 593 Pfam PF03235 Protein of unknown function DUF262 13 255 2.2E-25 T 14-10-2018 IPR004919 Domain of unknown function DUF262 Amir_6918 77ae019226c7cf47ebadfa7dba8a84f4 94 Pfam PF04248 Domain of unknown function (DUF427) 4 88 4.2E-31 T 14-10-2018 IPR007361 Domain of unknown function DUF427 Amir_6918 77ae019226c7cf47ebadfa7dba8a84f4 94 Gene3D G3DSA:2.170.150.40 1 93 1.2E-26 T 14-10-2018 Amir_2985 8b014198515f0267e23f3efc1bb6afa9 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 265 5.9E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_2985 8b014198515f0267e23f3efc1bb6afa9 270 SUPERFAMILY SSF161098 3 270 5.14E-61 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2985 8b014198515f0267e23f3efc1bb6afa9 270 Gene3D G3DSA:1.10.3720.10 2 262 1.6E-52 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2961 7015bb2a22a5961f43645db82189dde4 194 Gene3D G3DSA:3.40.630.30 8 144 2.4E-8 T 14-10-2018 Amir_2961 7015bb2a22a5961f43645db82189dde4 194 SUPERFAMILY SSF55729 12 140 2.87E-9 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_1752 d7d77869093d783c95ce73cae2fd707b 284 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 60 236 1.4E-35 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Amir_1752 d7d77869093d783c95ce73cae2fd707b 284 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 65 235 2.0E-52 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Amir_0332 ea65172e63f3406de45f28db8507aaca 394 Pfam PF01032 FecCD transport family 74 387 6.6E-81 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amir_0332 ea65172e63f3406de45f28db8507aaca 394 Gene3D G3DSA:1.10.3470.10 59 393 1.3E-88 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_0332 ea65172e63f3406de45f28db8507aaca 394 SUPERFAMILY SSF81345 55 387 8.11E-67 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Amir_6386 bb8a365ec15161ca029f3cd0b42cf59a 163 Pfam PF02575 YbaB/EbfC DNA-binding family 19 96 5.5E-9 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amir_6386 bb8a365ec15161ca029f3cd0b42cf59a 163 SUPERFAMILY SSF82607 21 94 3.79E-5 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_6386 bb8a365ec15161ca029f3cd0b42cf59a 163 Gene3D G3DSA:3.30.1310.10 5 106 9.8E-7 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amir_5398 a57e9f5bf31df9d10c10f6368e4e31c2 122 Pfam PF13581 Histidine kinase-like ATPase domain 11 73 7.9E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_6458 f8142423df97fe705fff24948923dad5 9529 Pfam PF15644 Papain fold toxin 1, glutamine deamidase 9406 9496 1.8E-8 T 14-10-2018 IPR028908 Tox-PL domain Amir_6825 0d1ac757cb4aea1240a6c83d4154fd67 268 Pfam PF11209 Protein of unknown function (DUF2993) 28 259 1.8E-41 T 14-10-2018 IPR021373 Protein of unknown function DUF2993 Amir_0694 a44addc3fce22e8397e249c8f1dc8427 389 SUPERFAMILY SSF88713 66 371 1.31E-20 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Amir_4748 4305051a3b815eb14417ccedd07c3745 124 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 10 94 7.0E-32 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Amir_2984 aab539a63f47e401664b4b6601eb3fcd 305 SUPERFAMILY SSF161098 59 293 8.9E-56 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2984 aab539a63f47e401664b4b6601eb3fcd 305 Gene3D G3DSA:1.10.3720.10 55 304 8.7E-69 T 14-10-2018 IPR035906 MetI-like superfamily Amir_2984 aab539a63f47e401664b4b6601eb3fcd 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 300 9.2E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_1770 46e3746ef8d43c695ea010b0d953d9cc 307 Pfam PF03631 Virulence factor BrkB 29 282 2.6E-38 T 14-10-2018 IPR017039 Virulence factor BrkB Amir_1770 46e3746ef8d43c695ea010b0d953d9cc 307 PIRSF PIRSF035875 2 300 6.2E-47 T 14-10-2018 IPR017039 Virulence factor BrkB Amir_5777 fd7bd4df23bfbbacba647e3a777d52d2 429 Pfam PF01882 Protein of unknown function DUF58 197 280 1.5E-19 T 14-10-2018 IPR002881 Domain of unknown function DUF58 Amir_0260 b192473af7fac30bc943ae83e3b373f7 155 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 32 146 5.0E-31 T 14-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III Amir_5755 58e35b9f4ac517d381ff6b663827d7f3 273 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 39 6.1E-15 T 14-10-2018 IPR019933 DivIVA domain Amir_5755 58e35b9f4ac517d381ff6b663827d7f3 273 Pfam PF05103 DivIVA protein 3 65 2.2E-12 T 14-10-2018 IPR007793 DivIVA family Amir_0814 c745f6e54e8d3efd3b75b9f25b040eed 362 Pfam PF10094 Uncharacterized protein conserved in bacteria (DUF2332) 4 356 1.1E-100 T 14-10-2018 IPR011200 Uncharacterised conserved protein UCP012608 Amir_4708 092c25339cc13aacf4bf9b3a4ab452ec 139 Gene3D G3DSA:3.10.450.50 15 135 5.2E-18 T 14-10-2018 Amir_4708 092c25339cc13aacf4bf9b3a4ab452ec 139 Pfam PF12680 SnoaL-like domain 25 123 2.6E-9 T 14-10-2018 IPR037401 SnoaL-like domain Amir_4708 092c25339cc13aacf4bf9b3a4ab452ec 139 SUPERFAMILY SSF54427 17 134 5.54E-20 T 14-10-2018 IPR032710 NTF2-like domain superfamily Amir_6771 fb25a0c97df689332a8122d86068f19b 221 SUPERFAMILY SSF53474 8 218 3.55E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6771 fb25a0c97df689332a8122d86068f19b 221 Gene3D G3DSA:3.40.50.1820 2 220 6.5E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_0701 af1b4e5a7ca5e3b04c70c07ed25829b5 373 Pfam PF06271 RDD family 160 286 3.4E-23 T 14-10-2018 IPR010432 RDD Amir_0873 f6ba8f98c1d5eb9eadceead883ebc216 292 Pfam PF02104 SURF1 family 25 222 1.6E-26 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amir_3715 9a7d3be5ffb3fba69d7b2b8d03ebefbf 192 Pfam PF04186 FxsA cytoplasmic membrane protein 13 119 1.2E-29 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 Amir_2329 e6b76f673d1f63bdaf7e994e5aa67180 256 Pfam PF01311 Bacterial export proteins, family 1 11 244 2.7E-53 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Amir_2329 e6b76f673d1f63bdaf7e994e5aa67180 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 78 97 3.8E-22 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Amir_2329 e6b76f673d1f63bdaf7e994e5aa67180 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 3.8E-22 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Amir_2329 e6b76f673d1f63bdaf7e994e5aa67180 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 3.8E-22 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Amir_2329 e6b76f673d1f63bdaf7e994e5aa67180 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 3.8E-22 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Amir_3487 611d98f771da0174f9ef85e611ab4b90 341 PRINTS PR00069 Aldo-keto reductase signature 40 64 4.0E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_3487 611d98f771da0174f9ef85e611ab4b90 341 PRINTS PR00069 Aldo-keto reductase signature 135 152 4.0E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_3487 611d98f771da0174f9ef85e611ab4b90 341 PRINTS PR00069 Aldo-keto reductase signature 104 122 4.0E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amir_3487 611d98f771da0174f9ef85e611ab4b90 341 SUPERFAMILY SSF51430 2 308 1.57E-97 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3487 611d98f771da0174f9ef85e611ab4b90 341 Gene3D G3DSA:3.20.20.100 1 313 1.6E-113 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_3487 611d98f771da0174f9ef85e611ab4b90 341 Pfam PF00248 Aldo/keto reductase family 17 307 1.7E-73 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_1760 31344e55234ac83e6447ca5a6fbfcfb5 187 Gene3D G3DSA:3.30.530.20 38 183 2.2E-12 T 14-10-2018 IPR023393 START-like domain superfamily Amir_1760 31344e55234ac83e6447ca5a6fbfcfb5 187 SUPERFAMILY SSF55961 38 179 1.88E-18 T 14-10-2018 Amir_1760 31344e55234ac83e6447ca5a6fbfcfb5 187 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 40 178 2.4E-11 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase Amir_2071 7a10358e899e2611f2c4b4624a3e5fa6 373 Pfam PF11991 Tryptophan dimethylallyltransferase 65 243 2.3E-12 T 14-10-2018 IPR017795 Aromatic prenyltransferase, DMATS-type GO:0009820|GO:0016765 Amir_2308 8b880e0f3077b8dbb0e5ebfb0f5048d7 55 Gene3D G3DSA:3.40.5.90 1 54 2.4E-12 T 14-10-2018 Amir_2308 8b880e0f3077b8dbb0e5ebfb0f5048d7 55 Pfam PF09360 Iron-binding zinc finger CDGSH type 2 43 3.5E-14 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Amir_2308 8b880e0f3077b8dbb0e5ebfb0f5048d7 55 SMART SM00704 4 48 1.8E-9 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Amir_2981 5cecb2766fd4bea16561a5c09e8438cb 261 Pfam PF07920 Protein of unknown function (DUF1684) 118 255 1.6E-44 T 14-10-2018 IPR012467 Protein of unknown function DUF1684 Amir_5826 3fcf99af81fd36be0a2df5799d8e2fee 159 Gene3D G3DSA:1.10.260.40 5 78 1.9E-5 T 14-10-2018 Amir_5826 3fcf99af81fd36be0a2df5799d8e2fee 159 SUPERFAMILY SSF47413 21 61 1.27E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_0174 59aa35a1a8b8da90c8aa4d43b69f9856 383 Pfam PF12307 Protein of unknown function (DUF3631) 184 373 3.3E-67 T 14-10-2018 IPR022081 Domain of unknown function DUF3631 Amir_4209 645e18ad6012966f88f4fc5d843af99a 180 Pfam PF11695 Domain of unknown function (DUF3291) 5 163 2.1E-46 T 14-10-2018 IPR021708 Domain of unknown function DUF3291 Amir_6081 03f03482e36d7679da23b50b0d28dd28 110 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 2 95 1.5E-18 T 14-10-2018 IPR002767 Thiamine-binding protein Amir_6081 03f03482e36d7679da23b50b0d28dd28 110 SUPERFAMILY SSF89957 1 99 1.02E-30 T 14-10-2018 IPR029756 MTH1187/YkoF-like Amir_6081 03f03482e36d7679da23b50b0d28dd28 110 Pfam PF01910 Thiamine-binding protein 3 93 3.3E-32 T 14-10-2018 IPR002767 Thiamine-binding protein Amir_6081 03f03482e36d7679da23b50b0d28dd28 110 Gene3D G3DSA:3.30.70.930 1 97 3.1E-29 T 14-10-2018 IPR029756 MTH1187/YkoF-like Amir_3401 1355b39a737e37e8f7119a084c0c3d2e 62 Pfam PF04024 PspC domain 5 59 1.5E-19 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal Amir_0813 1aeceaa77abb682a8166a1f1bb1ef10b 201 Pfam PF03551 Transcriptional regulator PadR-like family 22 97 5.6E-11 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal Amir_0813 1aeceaa77abb682a8166a1f1bb1ef10b 201 Gene3D G3DSA:1.10.10.10 15 109 7.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amir_0813 1aeceaa77abb682a8166a1f1bb1ef10b 201 SUPERFAMILY SSF46785 18 190 2.31E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amir_4999 08f76b60947d66d81a4e3a80c6858172 200 Gene3D G3DSA:3.10.490.10 3 189 2.7E-14 T 14-10-2018 Amir_3350 6da0e76df2165fbb331e115db43a8392 314 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 200 3.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3350 6da0e76df2165fbb331e115db43a8392 314 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 3.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3350 6da0e76df2165fbb331e115db43a8392 314 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 3.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3350 6da0e76df2165fbb331e115db43a8392 314 Gene3D G3DSA:3.40.50.720 4 309 1.9E-71 T 14-10-2018 Amir_3350 6da0e76df2165fbb331e115db43a8392 314 Pfam PF00106 short chain dehydrogenase 15 223 1.7E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amir_3350 6da0e76df2165fbb331e115db43a8392 314 SUPERFAMILY SSF51735 11 226 2.98E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_5328 c8a472aa93dbac417476e99939201af1 479 Pfam PF13556 PucR C-terminal helix-turn-helix domain 340 396 3.1E-18 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Amir_5328 c8a472aa93dbac417476e99939201af1 479 Gene3D G3DSA:1.10.10.2840 270 400 6.2E-19 T 14-10-2018 Amir_3545 eba09e8bb075f91554b9b421edb4dc5c 208 Gene3D G3DSA:3.40.470.10 18 198 4.1E-7 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amir_3545 eba09e8bb075f91554b9b421edb4dc5c 208 SUPERFAMILY SSF52141 83 185 1.5E-9 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amir_0488 0538be7f078619934c34a6f04adebcdc 479 Pfam PF00860 Permease family 20 432 2.2E-30 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Amir_0827 6cf30a839efe968c23d48cd6134e6c98 130 Pfam PF16170 Domain of unknown function (DUF4873) 40 128 2.4E-34 T 14-10-2018 IPR032371 Domain of unknown function DUF4873 Amir_4746 7c48ff97b61f7a3ad1ec8bb57b3f3be7 275 Pfam PF03537 Glycoside-hydrolase family GH114 45 260 1.6E-47 T 14-10-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain Amir_4449 5058010639b7b6c33bd9d0857fda6eef 153 Gene3D G3DSA:3.30.1050.10 8 148 6.1E-26 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Amir_4449 5058010639b7b6c33bd9d0857fda6eef 153 SUPERFAMILY SSF55718 7 151 4.12E-15 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Amir_3728 88345b22805a1694901036aa965be2e1 425 Pfam PF03600 Citrate transporter 240 418 3.8E-8 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Amir_3728 88345b22805a1694901036aa965be2e1 425 Pfam PF07158 Dicarboxylate carrier protein MatC N-terminus 3 146 4.4E-33 T 14-10-2018 IPR009827 Dicarboxylate carrier MatC N-terminal Amir_3647 7720fd804828ad266c94cdd8c6f3c430 90 Pfam PF16827 zinc-finger 7 69 5.7E-24 T 14-10-2018 IPR031795 Putative zinc-finger containing protein Amir_1479 3e60296e6a89102429c4376f4d8fb59d 284 Gene3D G3DSA:1.10.260.40 1 77 2.4E-5 T 14-10-2018 Amir_1479 3e60296e6a89102429c4376f4d8fb59d 284 SUPERFAMILY SSF47413 9 66 1.33E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1479 3e60296e6a89102429c4376f4d8fb59d 284 Pfam PF13560 Helix-turn-helix domain 12 72 3.6E-12 T 14-10-2018 Amir_5401 e4a99258e87a848755ae21c150b4c3ab 308 SUPERFAMILY SSF55315 227 297 8.64E-6 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Amir_6473 a59072e30f356e51cbb6e2fc3312fab7 92 Pfam PF01934 Protein of unknown function DUF86 11 83 3.4E-12 T 14-10-2018 IPR008201 Protein of unknown function DUF86 Amir_6485 85ccf87cd4366815723d46ffe11c9458 261 Pfam PF06182 ABC-2 family transporter protein 52 259 3.1E-11 T 14-10-2018 IPR010390 Protein of unknown function DUF990 Amir_2341 f9e80554201948bdaeb46e764e12b1fb 678 Gene3D G3DSA:3.30.750.140 529 641 4.1E-15 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily Amir_2341 f9e80554201948bdaeb46e764e12b1fb 678 Pfam PF02120 Flagellar hook-length control protein FliK 557 632 2.2E-13 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Amir_3977 7d3803756e96f493f71957ca73203df3 100 Pfam PF17032 zinc-ribbon family 19 72 8.1E-8 T 14-10-2018 IPR031493 Zinc-ribbon 15 Amir_3100 6f00a16e27027faaa291919e48e9846e 242 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 164 204 2.5E-13 T 14-10-2018 IPR022435 Surface-anchored repeat, actinobacteria Amir_1656 224b06d5471cbbc762f4b0842863abc5 99 Gene3D G3DSA:1.10.260.40 1 76 2.2E-10 T 14-10-2018 Amir_1656 224b06d5471cbbc762f4b0842863abc5 99 SUPERFAMILY SSF47413 3 75 4.22E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_3419 a2da72c08463884a7b67d89f580be475 273 Pfam PF11296 Protein of unknown function (DUF3097) 6 269 2.1E-120 T 14-10-2018 IPR021447 Protein of unknown function DUF3097 Amir_5688 97888b60ff7402cf61a92286b77f8ba3 119 Pfam PF04892 VanZ like family 33 103 6.9E-7 T 14-10-2018 IPR006976 VanZ-like Amir_6928 e42b0a667eb39624c5e362808b6d67be 224 Pfam PF09335 SNARE associated Golgi protein 43 170 3.0E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein Amir_0280 cb9e297eb379e77d2aec0e4c286564ce 138 Pfam PF07811 TadE-like protein 14 56 8.5E-6 T 14-10-2018 IPR012495 TadE-like Amir_0487 b47fbd1938217fe91bca112a366753c2 81 Pfam PF10745 Protein of unknown function (DUF2530) 6 80 1.4E-30 T 14-10-2018 IPR019681 Protein of unknown function DUF2530 Amir_0696 86b3893fd856c2c4de3470fdbeb3938a 455 Gene3D G3DSA:2.60.40.10 289 425 1.9E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold Amir_4350 75b34ad5928f79dc898c8acf94986dc1 936 Pfam PF13699 Domain of unknown function (DUF4157) 91 160 4.1E-18 T 14-10-2018 IPR025295 Domain of unknown function DUF4157 Amir_1121 7407f4f939fca56005f71669cda8b588 194 Pfam PF12079 Protein of unknown function (DUF3558) 7 167 1.2E-8 T 14-10-2018 IPR024520 Protein of unknown function DUF3558 Amir_2794 eaa58c02570a85881479aeb3d4ea442c 166 Pfam PF03780 Asp23 family, cell envelope-related function 39 149 1.7E-31 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 Amir_3725 ba01e038990a30127193d9fd4da90edc 354 Pfam PF04443 Acyl-protein synthetase, LuxE 166 349 3.7E-6 T 14-10-2018 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723 Amir_4374 27bda5300a22d09baf54ba060b98d305 409 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 129 352 6.3E-19 T 14-10-2018 IPR018713 Domain of unknown function DUF2236 Amir_1379 1ac9efb537a28f8b0426a0e4be3c4af0 517 Pfam PF05991 YacP-like NYN domain 397 514 7.3E-20 T 14-10-2018 IPR010298 Protein of unknown function DUF901 Amir_4655 b709ccb373a2389300895f44c099b72f 770 SUPERFAMILY SSF51905 66 307 5.37E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amir_4655 b709ccb373a2389300895f44c099b72f 770 Pfam PF13454 FAD-NAD(P)-binding 68 248 8.4E-43 T 14-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain Amir_6300 a8a90377d9d6b539e7a1dafd8eb7c7b3 462 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 5 269 3.4E-75 T 14-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 Amir_6300 a8a90377d9d6b539e7a1dafd8eb7c7b3 462 SUPERFAMILY SSF52777 5 155 3.34E-8 T 14-10-2018 Amir_6300 a8a90377d9d6b539e7a1dafd8eb7c7b3 462 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 5 457 2.7E-145 T 14-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 Amir_6300 a8a90377d9d6b539e7a1dafd8eb7c7b3 462 Pfam PF06974 Protein of unknown function (DUF1298) 314 456 1.5E-28 T 14-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 Amir_3394 6dfe4348ebdbb28418cb15702f9039e0 850 SUPERFAMILY SSF144091 37 218 1.44E-8 T 14-10-2018 Amir_3394 6dfe4348ebdbb28418cb15702f9039e0 850 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 519 815 6.5E-88 T 14-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal Amir_2888 0d55402888dc9dd4ce5dba4785196623 482 Pfam PF07690 Major Facilitator Superfamily 25 419 1.7E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_2888 0d55402888dc9dd4ce5dba4785196623 482 SUPERFAMILY SSF103473 9 463 2.53E-57 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_2888 0d55402888dc9dd4ce5dba4785196623 482 Gene3D G3DSA:1.20.1250.20 204 464 1.4E-17 T 14-10-2018 Amir_2888 0d55402888dc9dd4ce5dba4785196623 482 Gene3D G3DSA:1.20.1250.20 15 203 1.4E-38 T 14-10-2018 Amir_5109 e6d7863396f7718d703e730ad04d8d83 583 TIGRFAM TIGR04267 mod_HExxH: HEXXH motif domain 28 400 5.5E-84 T 14-10-2018 IPR026337 HEXXH motif domain Amir_2381 9fdbc977b7ecebbee7f832b766ca044d 108 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 8 103 2.2E-13 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD Amir_4769 ec29f59634fb78c3f09098e185ee8f3e 278 TIGRFAM TIGR03773 anch_rpt_wall: putative ABC transporter-associated repeat protein 11 247 1.4E-57 T 14-10-2018 IPR022395 Conserved hypothetical protein CHP03773, ABC transporter-like Amir_3329 f536a2f4829e47dcbc5dacafda25200c 132 Pfam PF13471 Transglutaminase-like superfamily 17 129 4.4E-28 T 14-10-2018 IPR032708 Microcin J25-processing protein McjB, C-terminal Amir_4938 189d6e706a574f574ebb2bcf6cb50845 478 Gene3D G3DSA:1.20.1250.20 218 456 1.4E-13 T 14-10-2018 Amir_4938 189d6e706a574f574ebb2bcf6cb50845 478 Gene3D G3DSA:1.20.1250.20 2 215 6.2E-31 T 14-10-2018 Amir_4938 189d6e706a574f574ebb2bcf6cb50845 478 SUPERFAMILY SSF103473 5 458 8.89E-52 T 14-10-2018 IPR036259 MFS transporter superfamily Amir_4938 189d6e706a574f574ebb2bcf6cb50845 478 Pfam PF07690 Major Facilitator Superfamily 15 423 1.9E-33 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amir_0662 f7ba82afba88e812d16a8adc9285208f 175 Pfam PF14124 Domain of unknown function (DUF4291) 5 171 5.2E-57 T 14-10-2018 IPR025633 Protein of unknown function DUF4291 Amir_5063 44578d5fdfbd82b972fa41f46369726b 64 Gene3D G3DSA:3.90.820.10 1 64 6.9E-33 T 14-10-2018 Amir_5063 44578d5fdfbd82b972fa41f46369726b 64 SMART SM00923 3 53 6.3E-30 T 14-10-2018 IPR005153 MbtH-like domain Amir_5063 44578d5fdfbd82b972fa41f46369726b 64 Pfam PF03621 MbtH-like protein 1 52 1.0E-27 T 14-10-2018 IPR005153 MbtH-like domain Amir_5063 44578d5fdfbd82b972fa41f46369726b 64 SUPERFAMILY SSF160582 1 64 3.14E-29 T 14-10-2018 IPR038020 MbtH-like domain superfamily Amir_5796 ab4cde69421231eb508ad9143f5bc2f8 288 Pfam PF04012 PspA/IM30 family 3 239 3.9E-48 T 14-10-2018 IPR007157 PspA/IM30 Amir_3645 c506c8266f84be81b2222933edd0d090 675 Gene3D G3DSA:3.40.50.300 262 543 2.8E-35 T 14-10-2018 Amir_3645 c506c8266f84be81b2222933edd0d090 675 SUPERFAMILY SSF52540 260 541 9.03E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amir_1888 dd756dcf4761abc722596efbd9f83d81 1099 Pfam PF13569 Domain of unknown function (DUF4132) 836 1014 7.1E-51 T 14-10-2018 IPR025406 Domain of unknown function DUF4132 Amir_0857 ab590a2ade0a951a5c9002352765904f 302 Pfam PF04228 Putative neutral zinc metallopeptidase 98 294 6.5E-16 T 14-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative Amir_6985 edb398592ebf615d41785ed9a88bf0a3 895 SUPERFAMILY SSF48208 437 888 2.49E-43 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_0911 6f1f1ff7de5556f55b2f1f3c035e4793 378 Pfam PF01384 Phosphate transporter family 21 319 1.1E-78 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 Amir_3209 1b678eb5a996d6df09d1af72255b6b73 561 Pfam PF16173 Domain of unknown function (DUF4874) 163 328 6.5E-50 T 14-10-2018 IPR032379 Domain of unknown function DUF4874 Amir_3209 1b678eb5a996d6df09d1af72255b6b73 561 Pfam PF16116 Domain of unknown function (DUF4832) 340 541 8.8E-64 T 14-10-2018 IPR032267 Domain of unknown function DUF4832 Amir_2068 19e8755cd220db69dc7169c4b96926bf 122 Pfam PF05331 Protein of unknown function (DUF742) 12 120 1.5E-33 T 14-10-2018 IPR007995 Protein of unknown function DUF742 Amir_0137 1ba7f03f9ff4039a08579ce9a941e20c 217 Pfam PF13578 Methyltransferase domain 58 182 3.8E-18 T 14-10-2018 Amir_0137 1ba7f03f9ff4039a08579ce9a941e20c 217 Gene3D G3DSA:3.40.50.150 25 204 1.5E-18 T 14-10-2018 Amir_0137 1ba7f03f9ff4039a08579ce9a941e20c 217 SUPERFAMILY SSF53335 54 198 7.7E-11 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_0124 17cf53c3165c0722cd2f01330748c2a4 169 Pfam PF04138 GtrA-like protein 43 166 7.4E-17 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 Amir_5884 1af43743eed52d62d53fc3f80bffee07 235 SUPERFAMILY SSF53474 5 232 1.19E-9 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_5884 1af43743eed52d62d53fc3f80bffee07 235 Gene3D G3DSA:3.40.50.1820 3 231 5.2E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6645 a95d37c866203045ee7ab03eaf4acfa7 132 Gene3D G3DSA:2.60.40.2880 42 130 2.6E-9 T 14-10-2018 IPR038468 Transport accessory protein MmpS, soluble domain superfamily Amir_0228 1574bd3ba3f522a15db85c7480dfe2d2 276 SUPERFAMILY SSF53335 42 271 1.51E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amir_0228 1574bd3ba3f522a15db85c7480dfe2d2 276 Gene3D G3DSA:3.40.50.150 14 273 1.6E-33 T 14-10-2018 Amir_0228 1574bd3ba3f522a15db85c7480dfe2d2 276 Pfam PF08241 Methyltransferase domain 84 176 3.5E-17 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amir_0323 428fc30f5004f748ec345337a701ae6c 442 Pfam PF13367 Protease prsW family 77 273 4.6E-51 T 14-10-2018 IPR026898 Protease PrsW GO:0008233 Amir_1036 1f37f6617c1e55224831c9dfd3d8409c 248 Pfam PF02698 DUF218 domain 78 202 3.6E-25 T 14-10-2018 IPR003848 Domain of unknown function DUF218 Amir_1500 890bb2482dbd913017fb430bffc5724d 81 Pfam PF11238 Protein of unknown function (DUF3039) 21 76 3.4E-29 T 14-10-2018 IPR021400 Protein of unknown function DUF3039 Amir_0677 2b24090f5211e54dc282cc9925371199 308 Gene3D G3DSA:1.10.3720.10 81 307 1.8E-19 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0677 2b24090f5211e54dc282cc9925371199 308 SUPERFAMILY SSF161098 90 289 2.62E-16 T 14-10-2018 IPR035906 MetI-like superfamily Amir_0677 2b24090f5211e54dc282cc9925371199 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 307 3.4E-33 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amir_3500 a78a3bece9a4e991797f7b1f95a7dada 134 Pfam PF02698 DUF218 domain 13 90 6.6E-13 T 14-10-2018 IPR003848 Domain of unknown function DUF218 Amir_2339 23dd1408f96c33b5b7293e1119723136 276 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 197 274 2.9E-21 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Amir_2339 23dd1408f96c33b5b7293e1119723136 276 SUPERFAMILY SSF117143 91 236 2.09E-39 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Amir_2339 23dd1408f96c33b5b7293e1119723136 276 Pfam PF00460 Flagella basal body rod protein 8 35 1.1E-9 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Amir_2339 23dd1408f96c33b5b7293e1119723136 276 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 134 7.1E-40 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Amir_2339 23dd1408f96c33b5b7293e1119723136 276 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 158 257 3.5E-34 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Amir_2021 0e1b30eb3954d98336b63e24090dfb57 361 SUPERFAMILY SSF55909 16 361 2.86E-78 T 14-10-2018 Amir_2021 0e1b30eb3954d98336b63e24090dfb57 361 Gene3D G3DSA:3.75.10.10 15 360 1.3E-94 T 14-10-2018 Amir_1335 6a43b2cc1b8634b18bf7c8fdf7dce280 144 Pfam PF11253 Protein of unknown function (DUF3052) 13 137 1.1E-57 T 14-10-2018 IPR021412 Protein of unknown function DUF3052 Amir_2490 2232624d7bce847de2a5fe174f72d33a 220 Gene3D G3DSA:3.40.630.30 4 202 1.2E-18 T 14-10-2018 Amir_2490 2232624d7bce847de2a5fe174f72d33a 220 SUPERFAMILY SSF55729 102 187 5.41E-8 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amir_1181 6fccece15b993354385d1c66871d81ef 179 Pfam PF01794 Ferric reductase like transmembrane component 13 135 2.4E-9 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain Amir_4712 b2310a2c2da45b78378b123a271f325a 881 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 16 544 3.9E-86 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 Amir_4712 b2310a2c2da45b78378b123a271f325a 881 SUPERFAMILY SSF48208 96 384 1.7E-17 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_4908 742d7c3d103e107bc61b5055a14a5e8c 568 Pfam PF13575 Domain of unknown function (DUF4135) 183 516 3.5E-73 T 14-10-2018 IPR025410 Lantibiotic biosynthesis protein, dehydration domain Amir_2448 305c4c4bd4eaf27832ec128f2e5956ba 196 Pfam PF01169 Uncharacterized protein family UPF0016 11 83 8.2E-21 T 14-10-2018 IPR001727 Gdt1 family Amir_2448 305c4c4bd4eaf27832ec128f2e5956ba 196 Pfam PF01169 Uncharacterized protein family UPF0016 113 183 7.7E-22 T 14-10-2018 IPR001727 Gdt1 family Amir_4915 94eee1520effbad4a79351d67ae0f977 348 Pfam PF00248 Aldo/keto reductase family 54 340 3.1E-40 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amir_4915 94eee1520effbad4a79351d67ae0f977 348 Gene3D G3DSA:3.20.20.100 48 347 4.4E-61 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_4915 94eee1520effbad4a79351d67ae0f977 348 SUPERFAMILY SSF51430 48 344 1.83E-58 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amir_5371 4f35a744d14c84de66cbafd7a4385049 303 Pfam PF09362 Domain of unknown function (DUF1996) 65 256 3.0E-23 T 14-10-2018 IPR018535 Domain of unknown function DUF1996 Amir_6964 059f04052de58d9642024ee5ba7d4339 247 Pfam PF06724 Domain of Unknown Function (DUF1206) 85 151 1.1E-12 T 14-10-2018 IPR009597 Domain of unknown function DUF1206 Amir_6964 059f04052de58d9642024ee5ba7d4339 247 Pfam PF06724 Domain of Unknown Function (DUF1206) 2 65 2.9E-17 T 14-10-2018 IPR009597 Domain of unknown function DUF1206 Amir_6964 059f04052de58d9642024ee5ba7d4339 247 Pfam PF06724 Domain of Unknown Function (DUF1206) 177 244 1.1E-15 T 14-10-2018 IPR009597 Domain of unknown function DUF1206 Amir_3262 392d41f45b001b08c8ddebaf68bd845a 489 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 3 430 1.7E-45 T 14-10-2018 IPR021145 Portal protein Amir_1661 da6dc23e4812c11da8ffa0d508ff146d 252 Pfam PF03707 Bacterial signalling protein N terminal repeat 122 179 1.8E-16 T 14-10-2018 IPR005330 MHYT domain Amir_1661 da6dc23e4812c11da8ffa0d508ff146d 252 Pfam PF03707 Bacterial signalling protein N terminal repeat 184 242 1.1E-6 T 14-10-2018 IPR005330 MHYT domain Amir_1661 da6dc23e4812c11da8ffa0d508ff146d 252 Pfam PF03707 Bacterial signalling protein N terminal repeat 59 115 3.6E-11 T 14-10-2018 IPR005330 MHYT domain Amir_5436 cbeb95dea034aa034c6b7e7579c32a7a 308 Pfam PF11382 Copper transport outer membrane protein, MctB 1 305 2.4E-94 T 14-10-2018 IPR021522 Copper transporter MctB GO:0016020|GO:0055070 Amir_5538 8582a90c6d8a83daf32a2e9f539a10b4 320 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 303 1.3E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amir_1046 9477e72a409e69ccece70a006c29a011 328 Pfam PF04434 SWIM zinc finger 196 220 6.5E-5 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 Amir_3861 54b7061886ed9015a4d3169aa4420b8d 817 Pfam PF04738 Lantibiotic dehydratase, C terminus 148 583 1.2E-16 T 14-10-2018 IPR006827 Lantibiotic dehydratase, N-terminal Amir_1298 bb6ffd8001015e52ec23702fc518a078 137 SUPERFAMILY SSF47413 7 71 4.38E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_1298 bb6ffd8001015e52ec23702fc518a078 137 Gene3D G3DSA:1.10.260.40 11 73 6.3E-6 T 14-10-2018 Amir_1630 57af0074e4374402a790769ce9c92411 294 Pfam PF05709 Phage tail protein 34 290 5.3E-14 T 14-10-2018 IPR008841 Siphovirus-type tail component Amir_5395 ba60ef3be80bfce98de051a0e9ae971c 282 Gene3D G3DSA:1.10.260.40 6 74 3.2E-10 T 14-10-2018 Amir_5395 ba60ef3be80bfce98de051a0e9ae971c 282 SMART SM00530 17 72 5.5E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amir_5395 ba60ef3be80bfce98de051a0e9ae971c 282 SUPERFAMILY SSF47413 12 72 4.86E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amir_5395 ba60ef3be80bfce98de051a0e9ae971c 282 Pfam PF13560 Helix-turn-helix domain 16 75 4.1E-14 T 14-10-2018 Amir_6559 11ff66ff5f3419b12f085ea1fb91b24a 270 SUPERFAMILY SSF53474 31 248 3.85E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_6559 11ff66ff5f3419b12f085ea1fb91b24a 270 Pfam PF12740 Chlorophyllase enzyme 32 135 7.8E-9 T 14-10-2018 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164 Amir_6559 11ff66ff5f3419b12f085ea1fb91b24a 270 Gene3D G3DSA:3.40.50.1820 4 266 7.3E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_1512 9022e9de1c7d1958b53959b20bc500b5 235 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 99 183 4.2E-7 T 14-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain Amir_6452 2bff993c398947c245ecb1f0df0b0004 357 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 327 2.1E-34 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amir_6171 e994c579ceb2323dd1dc14925d468a80 361 Gene3D G3DSA:1.10.3290.10 38 279 3.1E-15 T 14-10-2018 IPR036597 Fido-like domain superfamily Amir_6171 e994c579ceb2323dd1dc14925d468a80 361 SUPERFAMILY SSF140931 117 279 8.89E-13 T 14-10-2018 IPR036597 Fido-like domain superfamily Amir_5023 ee3d9d91ccdc43748fd77119e4b74b2d 245 Gene3D G3DSA:1.10.10.1320 6 64 2.4E-14 T 14-10-2018 Amir_5023 ee3d9d91ccdc43748fd77119e4b74b2d 245 Pfam PF13490 Putative zinc-finger 11 37 6.5E-7 T 14-10-2018 IPR027383 Putative zinc-finger Amir_6934 4c6a2df8290aca09484c38a220aed993 129 Pfam PF10861 Protein of Unknown function (DUF2784) 6 110 1.8E-32 T 14-10-2018 IPR021218 Protein of unknown function DUF2784 Amir_4265 7ba4d6583f78398c3b9c755a029e68ec 1178 Pfam PF13569 Domain of unknown function (DUF4132) 911 1094 7.4E-50 T 14-10-2018 IPR025406 Domain of unknown function DUF4132 Amir_2382 e7f20d3baf6d307ae064039470bdfad1 219 Pfam PF03591 AzlC protein 3 140 6.7E-30 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease Amir_4249 483f6848f482630f2b12941654e85a96 475 Pfam PF13203 Putative metallopeptidase domain 47 148 2.2E-6 T 14-10-2018 IPR025154 Putative metallopeptidase domain Amir_6041 2eeef0bdad887f3b3bc619cdee2a4f69 288 Pfam PF03601 Conserved hypothetical protein 698 21 268 1.3E-49 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 Amir_7014 5a279cea0e258d9b63e3f235b5f35856 388 SMART SM00387 293 387 2.0E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amir_7014 5a279cea0e258d9b63e3f235b5f35856 388 Gene3D G3DSA:3.30.565.10 255 386 6.8E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_7014 5a279cea0e258d9b63e3f235b5f35856 388 SUPERFAMILY SSF55874 265 384 3.87E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_7014 5a279cea0e258d9b63e3f235b5f35856 388 Pfam PF07730 Histidine kinase 192 253 1.4E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_2483 386fab0dc3942553830ca3f0a4655615 637 PRINTS PR01217 Proline rich extensin signature 403 424 9.4E-9 T 14-10-2018 Amir_2483 386fab0dc3942553830ca3f0a4655615 637 PRINTS PR01217 Proline rich extensin signature 425 441 9.4E-9 T 14-10-2018 Amir_2483 386fab0dc3942553830ca3f0a4655615 637 PRINTS PR01217 Proline rich extensin signature 354 370 9.4E-9 T 14-10-2018 Amir_2483 386fab0dc3942553830ca3f0a4655615 637 PRINTS PR01217 Proline rich extensin signature 386 398 9.4E-9 T 14-10-2018 Amir_2483 386fab0dc3942553830ca3f0a4655615 637 PRINTS PR01217 Proline rich extensin signature 461 486 9.4E-9 T 14-10-2018 Amir_2483 386fab0dc3942553830ca3f0a4655615 637 PRINTS PR01217 Proline rich extensin signature 442 459 9.4E-9 T 14-10-2018 Amir_2483 386fab0dc3942553830ca3f0a4655615 637 TIGRFAM TIGR04215 choice_anch_A: choice-of-anchor A domain 42 341 1.9E-34 T 14-10-2018 IPR026588 Choice-of-anchor A domain Amir_6971 7638c5501cf0dacd6d893b39569012e0 407 Gene3D G3DSA:3.30.1330.60 272 404 1.4E-19 T 14-10-2018 IPR036737 OmpA-like domain superfamily Amir_6971 7638c5501cf0dacd6d893b39569012e0 407 SUPERFAMILY SSF103088 285 400 5.23E-17 T 14-10-2018 IPR036737 OmpA-like domain superfamily Amir_6971 7638c5501cf0dacd6d893b39569012e0 407 Pfam PF00691 OmpA family 294 380 2.7E-11 T 14-10-2018 IPR006665 OmpA-like domain Amir_6351 2daa05cf837cfb8a4c6a02e46da7780c 141 Pfam PF07681 DoxX 12 94 4.1E-19 T 14-10-2018 IPR032808 DoxX family Amir_2871 62ea333efee3361b297f13d471a8e361 524 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 293 490 9.3E-16 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system Amir_1684 a7dbdd1b4f82dbcb8293068e1c89ed23 521 PRINTS PR01217 Proline rich extensin signature 314 335 3.5E-10 T 14-10-2018 Amir_1684 a7dbdd1b4f82dbcb8293068e1c89ed23 521 PRINTS PR01217 Proline rich extensin signature 388 413 3.5E-10 T 14-10-2018 Amir_1684 a7dbdd1b4f82dbcb8293068e1c89ed23 521 PRINTS PR01217 Proline rich extensin signature 302 314 3.5E-10 T 14-10-2018 Amir_1684 a7dbdd1b4f82dbcb8293068e1c89ed23 521 PRINTS PR01217 Proline rich extensin signature 345 361 3.5E-10 T 14-10-2018 Amir_1684 a7dbdd1b4f82dbcb8293068e1c89ed23 521 PRINTS PR01217 Proline rich extensin signature 365 382 3.5E-10 T 14-10-2018 Amir_4255 db7a3deed053ccce35481e9129a252ee 374 SUPERFAMILY SSF82771 171 214 6.67E-5 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Amir_1866 84fa1873511928dec09259ca99d9db4b 405 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 395 1.5E-40 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amir_2797 0853c69b4f1437e539d8d6e14b52161b 137 Pfam PF03780 Asp23 family, cell envelope-related function 23 124 2.1E-13 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 Amir_3273 97a4942d51f10de5a89cf49997b11580 279 SUPERFAMILY SSF56112 78 216 1.7E-8 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Amir_2453 f84e051449126ca91023dab39e8a05a3 99 Pfam PF07561 Domain of Unknown Function (DUF1540) 62 92 0.0048 T 14-10-2018 IPR011437 Domain of unknown function DUF1540 Amir_2453 f84e051449126ca91023dab39e8a05a3 99 Pfam PF07561 Domain of Unknown Function (DUF1540) 11 43 9.0E-4 T 14-10-2018 IPR011437 Domain of unknown function DUF1540 Amir_0052 a4033f4ac5e04d1205126385b91d9da6 428 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 143 356 4.7E-19 T 14-10-2018 IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain Amir_6391 de02b084d2b124af7a2943c928886fa4 73 Pfam PF13822 Acyl-CoA carboxylase epsilon subunit 6 66 5.1E-22 T 14-10-2018 IPR032716 Acyl-CoA carboxylase epsilon subunit Amir_4040 086777f52dffdfb0890a87fa29dafb7e 166 Gene3D G3DSA:1.25.40.10 49 157 1.3E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4040 086777f52dffdfb0890a87fa29dafb7e 166 Pfam PF12688 Tetratrico peptide repeat 39 159 3.2E-28 T 14-10-2018 Amir_4040 086777f52dffdfb0890a87fa29dafb7e 166 SUPERFAMILY SSF48452 10 129 2.61E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_4375 8ca3902b4a6465e786260a23140fd971 415 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 139 355 4.0E-18 T 14-10-2018 IPR018713 Domain of unknown function DUF2236 Amir_1214 62025dc46f56fcd570202f6867cca173 314 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 300 8.7E-79 T 14-10-2018 IPR007296 Domain of unknown function DUF403 Amir_1689 d2ec9ffe7a4d45cc2477e3bb9d062cd9 183 Gene3D G3DSA:1.20.120.450 2 180 1.0E-38 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_1689 d2ec9ffe7a4d45cc2477e3bb9d062cd9 183 Pfam PF04978 Protein of unknown function (DUF664) 21 178 3.5E-43 T 14-10-2018 IPR007061 Protein of unknown function DUF664 Amir_1689 d2ec9ffe7a4d45cc2477e3bb9d062cd9 183 SUPERFAMILY SSF109854 9 177 5.34E-35 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amir_6313 89cb9a953f804e50717d8afbf66333a7 294 Gene3D G3DSA:1.10.260.40 19 84 9.4E-7 T 14-10-2018 Amir_6313 89cb9a953f804e50717d8afbf66333a7 294 Pfam PF13560 Helix-turn-helix domain 17 84 1.7E-13 T 14-10-2018 Amir_6243 f017d42c9679f778aa7eca87ef001bfb 228 Gene3D G3DSA:1.10.1660.10 4 58 1.9E-8 T 14-10-2018 Amir_2283 093c3eac912dd3168e320a60219c44b8 185 Pfam PF14124 Domain of unknown function (DUF4291) 6 172 2.5E-58 T 14-10-2018 IPR025633 Protein of unknown function DUF4291 Amir_1405 49998d72e9816a51f772a737937e15ba 207 Pfam PF05257 CHAP domain 77 176 2.0E-6 T 14-10-2018 IPR007921 CHAP domain Amir_4662 8680a6fb9cebb659ffc627c1e4d4a940 283 SUPERFAMILY SSF51126 6 230 1.12E-16 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Amir_2452 fcf0efb2ff0912b55adac61cb1dc1df6 139 SUPERFAMILY SSF160631 21 136 5.89E-10 T 14-10-2018 Amir_2452 fcf0efb2ff0912b55adac61cb1dc1df6 139 Gene3D G3DSA:3.40.1580.10 5 139 5.1E-6 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily Amir_5396 fd3c9d8ef8f0faebc6a6b92a654dc041 66 Pfam PF04149 Domain of unknown function (DUF397) 14 64 8.3E-21 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_7059 676cd133d6c1eccac9c93a5e00a2b311 295 Pfam PF14428 SCP1.201-like deaminase 146 295 9.0E-44 T 14-10-2018 IPR032724 Deaminase, SCP1.201-like Amir_6479 13e378dd6f8c63aba9d71bfac7fd887e 268 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 3 241 4.9E-31 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase Amir_0625 46bca04121242ee7be0f7de95dd6fd7f 191 Pfam PF08666 SAF domain 29 88 2.3E-6 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Amir_0625 46bca04121242ee7be0f7de95dd6fd7f 191 SMART SM00858 28 89 5.1E-8 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Amir_6713 2c81d7e93e3b3c35dc2b32e08377afb8 518 Pfam PF05140 ResB-like family 18 500 1.3E-133 T 14-10-2018 IPR007816 ResB-like domain Amir_4527 ed0c32ce0a6f2260e262c679874344bd 102 Pfam PF10824 Excreted virulence factor EspC, type VII ESX diderm 6 98 3.2E-12 T 14-10-2018 IPR022536 ESX-1 secretion-associated protein EspC GO:0009306 Amir_0162 5b513016fc0a8aa358a4cb5250464e24 57 Pfam PF14013 MT0933-like antitoxin protein 8 53 5.7E-13 T 14-10-2018 IPR028037 Antitoxin Rv0909/MT0933 Amir_1404 ba72f2960687746c2103874893aacb61 559 Pfam PF05960 Bacterial protein of unknown function (DUF885) 24 556 4.9E-163 T 14-10-2018 IPR010281 Protein of unknown function DUF885 Amir_3318 e36585e50ab5e6c9954a757c231660f7 216 Pfam PF13026 Protein of unknown function (DUF3887) 130 211 1.3E-10 T 14-10-2018 IPR024981 Domain of unknown function DUF3887 KEGG: 00983+3.1.1.1|MetaCyc: PWY-6303|MetaCyc: PWY-6857 Amir_6954 33c259ccd356e45be2094e99bc84e1c3 126 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 114 3.8E-28 T 14-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV Amir_0821 2d21b6bb5e422e08d15b1ce1484a30cf 279 Pfam PF12705 PD-(D/E)XK nuclease superfamily 19 262 6.9E-30 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Amir_0926 f11ecb3c4c26bb8e84f4c55124e7dc9c 157 PIRSF PIRSF021697 1 156 8.1E-45 T 14-10-2018 IPR016795 Uncharacterised conserved protein UCP021697, membrane Amir_1939 949cfd4dd1493e1e49ee5838e2110c7f 242 Pfam PF01061 ABC-2 type transporter 9 205 1.8E-10 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Amir_4434 1718d18e824991246b676c56276596f0 369 Gene3D G3DSA:3.30.565.10 242 363 1.4E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4434 1718d18e824991246b676c56276596f0 369 SUPERFAMILY SSF55874 247 362 5.71E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amir_4434 1718d18e824991246b676c56276596f0 369 Pfam PF07730 Histidine kinase 170 230 7.2E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amir_0998 92a5cfd25d58ce776bb280b6480b6d4b 171 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 75 167 3.0E-6 T 14-10-2018 IPR026392 Exosortase/Archaeosortase domain Amir_6375 a574ee5abecd721547ab45e88341e0da 139 Pfam PF14430 Immunity protein Imm1 14 125 8.0E-29 T 14-10-2018 IPR025680 Immunity protein Imm1 Amir_5168 9d7e5742f320461fc0b942c91dcb6d18 322 Pfam PF02628 Cytochrome oxidase assembly protein 18 286 6.0E-14 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 Amir_1410 9bfadc989adac10a05f04f756ca3244b 138 SUPERFAMILY SSF54593 75 137 1.38E-6 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amir_0437 0a2efbfbfb3e8bc98904031d5ddc92f6 503 Pfam PF01435 Peptidase family M48 81 301 1.2E-12 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Amir_1355 e7af9974f6b6a1c9b95c2d60b5eca6fe 411 Gene3D G3DSA:1.20.1740.10 6 400 1.3E-16 T 14-10-2018 Amir_4404 efb8ece0c8f8dfa07e9f980461106ec8 1012 Pfam PF13569 Domain of unknown function (DUF4132) 761 924 1.7E-46 T 14-10-2018 IPR025406 Domain of unknown function DUF4132 Amir_6850 bf07d5aba1474ef54ad50b5ee899553a 346 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 331 5.2E-56 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amir_4089 a0ad10a648b886eba0258e3644a4f69e 408 Pfam PF09594 Glycosyltransferase family 87 57 290 5.8E-41 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 Amir_2279 819b4732f25a449a21ae75fcbbd1548d 752 Gene3D G3DSA:3.90.176.10 522 720 9.6E-27 T 14-10-2018 Amir_0788 8a05da01562ed21590dd79beed814f85 55 Pfam PF11314 Protein of unknown function (DUF3117) 4 52 1.8E-29 T 14-10-2018 IPR021465 Protein of unknown function DUF3117 Amir_0692 1d1edc2ab298c12bf64832413b8516f9 547 Pfam PF05960 Bacterial protein of unknown function (DUF885) 20 535 2.8E-148 T 14-10-2018 IPR010281 Protein of unknown function DUF885 Amir_1567 411685854c5eaf416ad0b3d529b532de 316 Pfam PF06089 L-asparaginase II 7 309 3.2E-113 T 14-10-2018 IPR010349 L-asparaginase II Amir_4309 54d79c0400b4493b82953fe4b0ed2709 1055 Pfam PF13569 Domain of unknown function (DUF4132) 788 969 6.6E-50 T 14-10-2018 IPR025406 Domain of unknown function DUF4132 Amir_5143 80d7a67fd56e780ee055b0f4874c78cf 479 Pfam PF05231 MASE1 32 308 2.5E-37 T 14-10-2018 IPR007895 MASE1 Amir_0801 303c09901f324729bab16a3a4bbe1b84 196 Pfam PF06210 Protein of unknown function (DUF1003) 40 140 3.5E-41 T 14-10-2018 IPR010406 Protein of unknown function DUF1003 Amir_2375 9b23a70dac3e961cd56e14ffef4c265d 119 Pfam PF13564 DoxX-like family 7 113 1.0E-24 T 14-10-2018 IPR032808 DoxX family Amir_1330 15b0abb05f1535df6e1dce55a2b7c3ca 232 Pfam PF04973 Nicotinamide mononucleotide transporter 18 196 4.9E-40 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 Amir_1330 15b0abb05f1535df6e1dce55a2b7c3ca 232 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 18 199 9.6E-12 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 Amir_1884 1a1299c0901b74dc53e2a3946b561f08 637 Pfam PF04434 SWIM zinc finger 62 87 1.4E-4 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 Amir_2877 64ab64d0f88995cc98f5ccbc2ec8aab4 347 Pfam PF04213 Htaa 90 268 3.7E-36 T 14-10-2018 IPR007331 Htaa Amir_3650 138cf102f0508b2d560175182cfd0859 461 Gene3D G3DSA:1.10.260.40 17 84 2.6E-5 T 14-10-2018 Amir_1252 10e30f587c0adf09616602494ab83379 110 Gene3D G3DSA:3.40.140.10 4 96 4.7E-5 T 14-10-2018 Amir_1252 10e30f587c0adf09616602494ab83379 110 SUPERFAMILY SSF53927 14 79 1.43E-7 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Amir_6861 5377cf5758d2bf6fb64293b7c9be7bb0 104 Pfam PF10824 Excreted virulence factor EspC, type VII ESX diderm 4 95 1.7E-5 T 14-10-2018 IPR022536 ESX-1 secretion-associated protein EspC GO:0009306 Amir_0686 165864feb17b10158cd0731ddb70465e 434 Pfam PF01882 Protein of unknown function DUF58 197 291 1.8E-18 T 14-10-2018 IPR002881 Domain of unknown function DUF58 Amir_6388 d103a851fcb47ce46af131109bc48b28 170 Pfam PF03703 Bacterial PH domain 78 152 1.2E-17 T 14-10-2018 IPR005182 Domain of unknown function DUF304 Amir_6631 56b8c6420bc9145d9b502a99e641ff6b 117 Pfam PF02470 MlaD protein 38 111 1.1E-15 T 14-10-2018 IPR003399 Mce/MlaD Amir_0105 8940a2b984eb3f0f806bdb2de0758fc1 140 Pfam PF14428 SCP1.201-like deaminase 24 130 9.3E-23 T 14-10-2018 IPR032724 Deaminase, SCP1.201-like Amir_2948 f8d14fd6d00ba1927a5d2e9ff1951784 650 Pfam PF04865 Baseplate J-like protein 404 574 2.4E-15 T 14-10-2018 IPR006949 Baseplate protein J-like Amir_2948 f8d14fd6d00ba1927a5d2e9ff1951784 650 TIGRFAM TIGR02243 TIGR02243: putative baseplate assembly protein 6 613 2.8E-170 T 14-10-2018 IPR011749 Conserved hypothetical protein CHP02243 Amir_2970 ce93d9e817569ba94c61e436ed82dd58 542 SUPERFAMILY SSF53474 102 510 2.75E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Amir_2970 ce93d9e817569ba94c61e436ed82dd58 542 Pfam PF00561 alpha/beta hydrolase fold 103 255 1.0E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amir_2970 ce93d9e817569ba94c61e436ed82dd58 542 Pfam PF08386 TAP-like protein 432 532 9.0E-20 T 14-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal Amir_0075 88857e13c10a83f5475eb5116d20e346 302 Pfam PF14219 Domain of unknown function (DUF4328) 107 265 8.9E-36 T 14-10-2018 IPR025565 Domain of unknown function DUF4328 Amir_1006 0d89089f3667ade9a968e0a0be75b92a 185 Pfam PF09438 Domain of unknown function (DUF2017) 6 184 7.3E-62 T 14-10-2018 IPR018561 Domain of unknown function DUF2017 Amir_5709 35ffd7df3077d8702150762e229a39bc 129 Pfam PF02661 Fic/DOC family 8 86 7.0E-8 T 14-10-2018 IPR003812 Fido domain Amir_5709 35ffd7df3077d8702150762e229a39bc 129 Gene3D G3DSA:1.20.120.1870 6 129 8.1E-24 T 14-10-2018 Amir_6932 19288dcb572691ffe69e602af691cc0a 371 Gene3D G3DSA:1.50.10.20 19 362 4.3E-90 T 14-10-2018 Amir_6932 19288dcb572691ffe69e602af691cc0a 371 Pfam PF03663 Glycosyl hydrolase family 76 53 328 1.2E-31 T 14-10-2018 IPR005198 Glycoside hydrolase, family 76 Amir_6932 19288dcb572691ffe69e602af691cc0a 371 SUPERFAMILY SSF48208 26 310 8.5E-25 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amir_0713 5b5de28237d8247f25cefc251bbeabda 225 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 16 222 7.1E-59 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 Amir_0713 5b5de28237d8247f25cefc251bbeabda 225 Pfam PF03006 Haemolysin-III related 16 216 6.5E-45 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 Amir_4410 d12fd89ba54473555d7b536760fb2f94 172 SUPERFAMILY SSF51735 11 104 9.4E-9 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Amir_4410 d12fd89ba54473555d7b536760fb2f94 172 Gene3D G3DSA:3.40.50.720 5 116 2.7E-8 T 14-10-2018 Amir_5766 3620ff37310022dac52e41ca8f7efb83 153 SUPERFAMILY SSF52309 20 98 5.19E-7 T 14-10-2018 Amir_4305 7c1c7adf6f5a538d0fe47a755fe598a4 283 SUPERFAMILY SSF103032 38 230 7.19E-5 T 14-10-2018 IPR035948 YwqG-like superfamily Amir_5621 ac87845ed29f14930a308ef4bbfaa254 474 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 10 438 2.2E-44 T 14-10-2018 IPR021145 Portal protein Amir_0134 85291ff7fe65aa20a9dfbd0a7f1c523b 303 Pfam PF01061 ABC-2 type transporter 38 264 5.2E-24 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Amir_7068 7d6cce77c96b50fed72ab12e2e48f240 143 Pfam PF14136 Domain of unknown function (DUF4303) 2 67 9.0E-11 T 14-10-2018 IPR025409 Protein of unknown function DUF4303 Amir_7068 7d6cce77c96b50fed72ab12e2e48f240 143 Pfam PF14136 Domain of unknown function (DUF4303) 79 128 6.5E-8 T 14-10-2018 IPR025409 Protein of unknown function DUF4303 Amir_5590 0a809d5a479bcb939dde88de36769cb0 242 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 233 1.0E-32 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase Amir_2584 1dcb4c840635140c9fb19fa789e8da90 86 SUPERFAMILY SSF160424 3 84 1.96E-19 T 14-10-2018 IPR036170 Probable antitoxin YezG superfamily Amir_5181 70ba8f87d0da729f19801e6a0c0707c1 215 SUPERFAMILY SSF51182 76 200 4.4E-6 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Amir_0880 9a13f39349abd3f60d71679c38ab0010 245 Pfam PF02591 C4-type zinc ribbon domain 203 237 7.1E-10 T 14-10-2018 IPR003743 C4-type zinc ribbon domain Amir_2774 c2d7ada8e0e561b0178228a6c6d20386 242 Pfam PF13490 Putative zinc-finger 3 37 8.2E-8 T 14-10-2018 IPR027383 Putative zinc-finger Amir_5551 3517a3781ed4f07c4856a688ca1b2c4d 251 Pfam PF13391 HNH endonuclease 159 199 8.0E-7 T 14-10-2018 IPR003615 HNH nuclease Amir_2340 ddc471aa2de2109074b1707e20d999f1 139 Pfam PF03963 Flagellar hook capping protein - N-terminal region 10 74 3.6E-16 T 14-10-2018 IPR005648 Flagellar hook capping protein Amir_6255 285e719f195fc0f79349ee777c1169ac 194 Pfam PF14016 Protein of unknown function (DUF4232) 73 177 2.3E-21 T 14-10-2018 IPR025326 Protein of unknown function DUF4232 Amir_5756 4ef2a7da524f0579f59a5be54ccb6647 94 Pfam PF02325 YGGT family 10 90 2.7E-12 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 Amir_4162 c1bbf2c51113262a4de7b41c577e875e 195 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 44 187 7.6E-19 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 Amir_0084 6da9fb07b9f9d5c2bbc825c258a137cc 217 Gene3D G3DSA:1.10.3630.10 1 211 2.5E-28 T 14-10-2018 IPR038261 Golgi phosphoprotein 3-like domain superfamily Amir_0084 6da9fb07b9f9d5c2bbc825c258a137cc 217 Pfam PF05719 Golgi phosphoprotein 3 (GPP34) 4 202 1.4E-52 T 14-10-2018 IPR008628 Golgi phosphoprotein 3-like GO:0070273 Amir_0450 229e533a0b23c8ac9a6fcbf420427d54 84 Pfam PF04024 PspC domain 25 83 4.6E-18 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal Amir_4504 3d99b399f12bdf9b70ae2643c8c66116 164 Pfam PF16571 FBP C-terminal treble-clef zinc-finger 8 161 1.6E-57 T 14-10-2018 IPR032330 Elongation factor G-binding protein, C-terminal treble-clef zinc-finger Amir_0546 779548b304ab3279debbc65097a12fa6 159 Pfam PF14011 EspG family 14 126 1.0E-7 T 14-10-2018 IPR025734 EspG family Amir_5918 5cdcdcf5bf0d4a63f83c21e69a731d0e 107 Pfam PF10611 Protein of unknown function (DUF2469) 1 100 9.9E-53 T 14-10-2018 IPR019592 Protein of unknown function DUF2469 Amir_2966 bb3dc7478be5e597c462ac9e88ad6490 1083 Pfam PF13569 Domain of unknown function (DUF4132) 824 1001 1.5E-51 T 14-10-2018 IPR025406 Domain of unknown function DUF4132 Amir_2223 a3b4fc76b16b80dd7e355f7342969d99 376 Pfam PF02163 Peptidase family M50 151 194 1.6E-6 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Amir_2223 a3b4fc76b16b80dd7e355f7342969d99 376 PIRSF PIRSF006404 13 376 1.4E-67 T 14-10-2018 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS Amir_4931 2259fb25fda96b253b886f97fa915091 486 Pfam PF00939 Sodium:sulfate symporter transmembrane region 32 477 1.5E-25 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Amir_4460 a8b2103f2ae3dcd48f9f3f85e32942fd 154 Pfam PF14079 Domain of unknown function (DUF4260) 39 147 4.9E-39 T 14-10-2018 IPR025356 Protein of unknown function DUF4260 Amir_1090 5916543b0fe1d793a074a7eb3dba19e7 124 Pfam PF05610 Protein of unknown function (DUF779) 13 110 4.7E-48 T 14-10-2018 IPR008497 Protein of unknown function DUF779 Amir_1090 5916543b0fe1d793a074a7eb3dba19e7 124 PIRSF PIRSF009151 1 123 1.6E-60 T 14-10-2018 IPR008497 Protein of unknown function DUF779 Amir_0017 f1b43b192f0d77d1f423e3d536b52d5b 353 SUPERFAMILY SSF63817 139 336 2.59E-27 T 14-10-2018 IPR023365 Sortase domain superfamily Amir_0017 f1b43b192f0d77d1f423e3d536b52d5b 353 Pfam PF04203 Sortase family 170 335 1.4E-29 T 14-10-2018 IPR005754 Sortase family Amir_2825 4fc32369168cf667296d0bcdec527947 253 PIRSF PIRSF006648 3 252 6.5E-20 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amir_2825 4fc32369168cf667296d0bcdec527947 253 Pfam PF01061 ABC-2 type transporter 19 218 2.4E-18 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Amir_5987 c5f566595bed66ddb6f63f1d63278258 180 Pfam PF12028 Protein of unknown function (DUF3515) 19 173 2.4E-45 T 14-10-2018 IPR021903 Protein of unknown function DUF3515 Amir_0236 2f4e9b813fe7ebc47dfe2cd6ff94a219 97 Pfam PF02467 Transcription factor WhiB 7 69 9.2E-22 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain Amir_0236 2f4e9b813fe7ebc47dfe2cd6ff94a219 97 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 74 17.668 T 14-10-2018 IPR003482 Transcription factor WhiB Amir_3584 0d3f1a6e3b191e07487b855439132b2e 761 Pfam PF04738 Lantibiotic dehydratase, C terminus 633 710 4.0E-12 T 14-10-2018 IPR006827 Lantibiotic dehydratase, N-terminal Amir_3584 0d3f1a6e3b191e07487b855439132b2e 761 Pfam PF04738 Lantibiotic dehydratase, C terminus 89 374 1.0E-22 T 14-10-2018 IPR006827 Lantibiotic dehydratase, N-terminal Amir_3584 0d3f1a6e3b191e07487b855439132b2e 761 Pfam PF04738 Lantibiotic dehydratase, C terminus 447 600 4.9E-8 T 14-10-2018 IPR006827 Lantibiotic dehydratase, N-terminal Amir_1551 54ba7fb2e0252013fa91d5a01c040221 182 Pfam PF11452 Protein of unknown function (DUF3000) 8 179 4.2E-72 T 14-10-2018 IPR021555 Protein of unknown function DUF3000 Amir_0560 88ed2869df39e7bb3008bff85046732b 176 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 11 159 3.3E-51 T 14-10-2018 IPR018681 Protein of unknown function DUF2165, transmembrane Amir_0739 613d5c37c88b86bcfd849b31a2879cdf 220 Pfam PF14016 Protein of unknown function (DUF4232) 81 196 3.2E-19 T 14-10-2018 IPR025326 Protein of unknown function DUF4232 Amir_1597 dd1e42203e22fe96d655339b279e334e 261 Pfam PF07070 SpoOM protein 3 218 1.2E-81 T 14-10-2018 IPR009776 Sporulation stage 0, protein M Amir_3113 11b3d85c1cfb140f9646eef7598a25a6 649 Pfam PF12532 Protein of unknown function (DUF3732) 465 639 1.9E-50 T 14-10-2018 IPR022205 Protein of unknown function DUF3732 Amir_3043 753441e1c64d4f895a454da721fcd6d7 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 300 2.1E-41 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amir_6378 536849e0622ae330f76bd783689e9bc0 184 Pfam PF04138 GtrA-like protein 28 158 3.1E-24 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 Amir_5679 a17436808ae85158a9427775af8afcbf 63 Pfam PF04149 Domain of unknown function (DUF397) 4 56 5.2E-17 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_6055 7878fb0824ae0d8977ae765794036efc 240 Gene3D G3DSA:3.30.1330.60 117 231 5.2E-5 T 14-10-2018 IPR036737 OmpA-like domain superfamily Amir_6055 7878fb0824ae0d8977ae765794036efc 240 SUPERFAMILY SSF103088 141 233 2.09E-6 T 14-10-2018 IPR036737 OmpA-like domain superfamily Amir_5029 17b615d9705e70f50d4839553de55265 158 Pfam PF06803 Protein of unknown function (DUF1232) 97 128 6.2E-12 T 14-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 Amir_2932 979191aff0efad52721a19a40217cf7b 241 Pfam PF14065 Protein of unknown function (DUF4255) 4 180 4.4E-40 T 14-10-2018 IPR025351 Protein of unknown function DUF4255 Amir_3351 beb0c966713ff87021f750146076a2ef 87 Pfam PF04226 Transglycosylase associated protein 32 75 8.3E-6 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 Amir_0779 53f55cd4ead085951f09380a76200846 191 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 66 98 8.6E-12 T 14-10-2018 IPR019933 DivIVA domain Amir_4992 4116ebb50f1ebf6991d0a3b8a04d7ad9 200 Pfam PF09335 SNARE associated Golgi protein 34 159 3.3E-24 T 14-10-2018 IPR032816 SNARE associated Golgi protein Amir_2934 f5c43a8591e823db883dcf384bd337d2 286 Pfam PF14339 Domain of unknown function (DUF4394) 49 280 2.0E-64 T 14-10-2018 IPR025507 Domain of unknown function DUF4394 Amir_3749 e693cf5957ad84ca1c73e89ef5bd1016 208 SUPERFAMILY SSF48317 71 198 6.21E-8 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Amir_1456 a726ef5fda0d8685263ddb4d70715837 311 Pfam PF12006 Protein of unknown function (DUF3500) 3 297 1.4E-76 T 14-10-2018 IPR021889 Protein of unknown function DUF3500 Amir_1645 6cb52a1b96dfb565247f2d53ccc5ba79 406 Pfam PF17236 Family of unknown function (DUF5309) 23 398 9.3E-34 T 14-10-2018 IPR035198 Protein of unknown function DUF5309 Amir_1295 4a96d8ec4739e199ef975e10212aadc3 281 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 49 247 4.4E-18 T 14-10-2018 IPR018713 Domain of unknown function DUF2236 Amir_4048 43c10dfa003457497613f1c5db9ae4eb 826 Pfam PF02687 FtsX-like permease family 729 818 3.5E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amir_0871 0a89fc582d973c36c7be634c259ac2ff 492 Pfam PF09660 Protein of unknown function (DUF2397) 10 486 3.1E-120 T 14-10-2018 IPR013493 Conserved hypothetical protein CHP02677 Amir_5604 296111d210649fbb5881a71ed332d8c1 68 Gene3D G3DSA:1.10.1660.10 8 62 3.2E-6 T 14-10-2018 Amir_4986 dac17a00311109b50d43e12fd6f3d53d 75 Pfam PF04149 Domain of unknown function (DUF397) 18 69 2.1E-10 T 14-10-2018 IPR007278 Domain of unknown function DUF397 Amir_6451 3d25dfcde2f90c18fb94bfcfe4571e52 421 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 335 1.0E-32 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amir_1563 44138b4085d9eaab3724f32044877be9 303 TIGRFAM TIGR04222 near_uncomplex: TIGR04222 domain 6 213 1.7E-28 T 14-10-2018 IPR026467 Ser/Gly rich, Cys interspersed, C-terminal domain Amir_5299 6b536d8bd4409f58cdf77b56dbed9a45 248 Pfam PF14428 SCP1.201-like deaminase 120 242 1.4E-38 T 14-10-2018 IPR032724 Deaminase, SCP1.201-like Amir_3173 cbd3532c66c9bc515f5d623eaf01552b 88 Pfam PF17195 Protein of unknown function (DUF5132) 20 65 2.0E-21 T 14-10-2018 IPR033456 Protein of unknown function DUF5132 Amir_5367 8dff88bccc6178be9123362c5b28c7d9 245 Pfam PF14325 Domain of unknown function (DUF4383) 23 146 2.4E-25 T 14-10-2018 IPR025492 Protein of unknown function DUF4383 Amir_0592 30e594691363b83ddb685e0dab0feb89 372 Pfam PF13182 Protein of unknown function (DUF4007) 14 327 2.9E-92 T 14-10-2018 IPR025248 Domain of unknown function DUF4007 Amir_1107 7fe2ab15cac4d7079ade434adfed5f18 468 Gene3D G3DSA:1.25.40.10 208 441 1.9E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amir_2335 37ceca704bde303d126fd8a46ba1f8f5 149 Pfam PF03748 Flagellar basal body-associated protein FliL 61 149 1.8E-13 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Amir_6499 13adec9ce8445fe5c3e118d1629c0e51 99 Pfam PF11222 Protein of unknown function (DUF3017) 17 89 3.5E-20 T 14-10-2018 IPR021385 Protein of unknown function DUF3017 Amir_0485 7118d8f8db995e9da383c94b6b1b4001 308 Pfam PF11228 Protein of unknown function (DUF3027) 42 233 1.3E-81 T 14-10-2018 IPR021391 Protein of unknown function DUF3027 Amir_2553 1894a41dfdb1d7edaf217cd8267668ba 304 Pfam PF02628 Cytochrome oxidase assembly protein 16 283 3.2E-15 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 Amir_5293 ed16cbc830c1815028a567e2fe7c584a 224 Pfam PF06197 Protein of unknown function (DUF998) 26 212 1.3E-24 T 14-10-2018 IPR009339 Protein of unknown function DUF998 Amir_1533 e539b18c3881e44871ede0aff79d6e6c 144 Pfam PF12079 Protein of unknown function (DUF3558) 4 134 2.8E-18 T 14-10-2018 IPR024520 Protein of unknown function DUF3558 Amir_2093 14598a151e1522dd3386abcd527ac59c 310 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 10 287 2.8E-63 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740