FB03_00020 SM00354 helix_turn _helix lactose operon repressor FB03_00030 SM01007 Class II Aldolase and Adducin N-terminal domain FB03_00050 SM00382 ATPases associated with a variety of cellular activities FB03_00070 SM01120 FB03_00070 FB03_00095 SM00530 Helix-turn-helix XRE-family like proteins FB03_00100 SM00530 Helix-turn-helix XRE-family like proteins FB03_00110 SM00062 Bacterial periplasmic substrate-binding proteins FB03_00125 SM00382 ATPases associated with a variety of cellular activities FB03_00150 SM00479 FB03_00150 FB03_00180 SM00382 ATPases associated with a variety of cellular activities FB03_00225 SM00354 helix_turn _helix lactose operon repressor FB03_00225 SM00640 Glycosyl hydrolases family 32 FB03_00245 SM00421 helix_turn_helix, Lux Regulon FB03_00245 SM00448 cheY-homologous receiver domain FB03_00260 SM00382 ATPases associated with a variety of cellular activities FB03_00305 SM00829 Enoylreductase FB03_00325 SM00382 ATPases associated with a variety of cellular activities FB03_00365 SM00382 ATPases associated with a variety of cellular activities FB03_00365 SM00994 ClpX C4-type zinc finger FB03_00365 SM01086 C-terminal, D2-small domain, of ClpB protein FB03_00400 SM00448 cheY-homologous receiver domain FB03_00400 SM00862 Transcriptional regulatory protein, C terminal FB03_00425 SM00382 ATPases associated with a variety of cellular activities FB03_00430 SM00382 ATPases associated with a variety of cellular activities FB03_00510 SM00968 SMC proteins Flexible Hinge Domain FB03_00520 SM00382 ATPases associated with a variety of cellular activities FB03_00520 SM00962 SRP54-type protein, GTPase domain FB03_00520 SM00963 SRP54-type protein, helical bundle domain FB03_00525 SM00382 ATPases associated with a variety of cellular activities FB03_00525 SM00962 SRP54-type protein, GTPase domain FB03_00525 SM00963 SRP54-type protein, helical bundle domain FB03_00590 SM00382 ATPases associated with a variety of cellular activities FB03_00625 SM00382 ATPases associated with a variety of cellular activities FB03_00730 SM00904 Riboflavin kinase FB03_00740 SM01387 FB03_00740 FB03_00765 SM01130 FB03_00765 FB03_00770 SM00849 Metallo-beta-lactamase superfamily FB03_00775 SM00843 FB03_00775 FB03_00790 SM00530 Helix-turn-helix XRE-family like proteins FB03_00800 SM00382 ATPases associated with a variety of cellular activities FB03_00825 SM00491 FB03_00825 FB03_00835 SM00257 Lysin motif FB03_00935 SM00864 Tubulin/FtsZ family, GTPase domain FB03_00935 SM00865 Tubulin/FtsZ family, C-terminal domain FB03_00975 SM00481 DNA polymerase alpha chain like domain FB03_01055 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FB03_01060 SM00400 zinc finger FB03_01060 SM00493 FB03_01060 FB03_01065 SM00346 helix_turn_helix isocitrate lyase regulation FB03_01135 SM00382 ATPases associated with a variety of cellular activities FB03_01145 SM00354 helix_turn _helix lactose operon repressor FB03_01205 SM00382 ATPases associated with a variety of cellular activities FB03_01210 SM00382 ATPases associated with a variety of cellular activities FB03_01240 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain FB03_01280 SM01230 FB03_01280 FB03_01290 SM01230 FB03_01290 FB03_01350 SM00465 GIY-YIG type nucleases (URI domain) FB03_01350 SM00479 FB03_01350 FB03_01370 SM00220 Serine/Threonine protein kinases, catalytic domain FB03_01370 SM00740 FB03_01370 FB03_01405 SM00479 FB03_01405 FB03_01415 SM00387 Histidine kinase-like ATPases FB03_01415 SM00433 TopoisomeraseII FB03_01425 SM00434 DNA Topoisomerase IV FB03_01480 SM00341 Helicase and RNase D C-terminal FB03_01480 SM00474 3'-5' exonuclease FB03_01495 SM00642 Alpha-amylase domain FB03_01500 SM00642 Alpha-amylase domain FB03_01505 SM00642 Alpha-amylase domain FB03_01540 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain FB03_01580 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FB03_01585 SM00382 ATPases associated with a variety of cellular activities FB03_01610 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FB03_01610 SM00954 Region found in RelA / SpoT proteins FB03_01625 SM00849 Metallo-beta-lactamase superfamily FB03_01710 SM00363 S4 RNA-binding domain FB03_01770 SM00382 ATPases associated with a variety of cellular activities FB03_01800 SM00382 ATPases associated with a variety of cellular activities FB03_01815 SM00382 ATPases associated with a variety of cellular activities FB03_01825 SM00244 prohibitin homologues FB03_01855 SM00481 DNA polymerase alpha chain like domain FB03_01960 SM00448 cheY-homologous receiver domain FB03_01960 SM01012 FB03_01960 FB03_01970 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs FB03_01970 SM00475 5'-3' exonuclease FB03_01970 SM00482 DNA polymerase A domain FB03_01975 SM00316 Ribosomal protein S1-like RNA-binding domain FB03_01995 SM00487 DEAD-like helicases superfamily FB03_01995 SM00490 helicase superfamily c-terminal domain FB03_02010 SM00382 ATPases associated with a variety of cellular activities FB03_02015 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FB03_02015 SM00465 GIY-YIG type nucleases (URI domain) FB03_02035 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FB03_02065 SM00861 Transketolase, pyrimidine binding domain FB03_02090 SM00363 S4 RNA-binding domain FB03_02105 SM00382 ATPases associated with a variety of cellular activities FB03_02165 SM00382 ATPases associated with a variety of cellular activities FB03_02180 SM00382 ATPases associated with a variety of cellular activities FB03_02185 SM00382 ATPases associated with a variety of cellular activities FB03_02205 SM01133 FB03_02205 FB03_02250 SM00240 Forkhead associated domain FB03_02255 SM00422 helix_turn_helix, mercury resistance FB03_02275 SM00422 helix_turn_helix, mercury resistance FB03_02300 SM00487 DEAD-like helicases superfamily FB03_02300 SM00490 helicase superfamily c-terminal domain FB03_02300 SM01142 FB03_02300 FB03_02335 SM00062 Bacterial periplasmic substrate-binding proteins FB03_02380 SM00072 Guanylate kinase homologues. FB03_02390 SM00363 S4 RNA-binding domain FB03_02400 SM00841 Elongation factor P, C-terminal FB03_02400 SM01185 FB03_02400 FB03_02425 SM00732 Likely ribonuclease with RNase H fold. FB03_02430 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain FB03_02435 SM00363 S4 RNA-binding domain FB03_02435 SM01390 FB03_02435 FB03_02440 SM00382 ATPases associated with a variety of cellular activities FB03_02465 SM00487 DEAD-like helicases superfamily FB03_02465 SM00490 helicase superfamily c-terminal domain FB03_02485 SM00873 B3/4 domain FB03_02485 SM00874 tRNA synthetase B5 domain FB03_02485 SM00896 Ferredoxin-fold anticodon binding domain FB03_02510 SM00967 RNA 2'-O ribose methyltransferase substrate binding FB03_02585 SM00116 Domain in cystathionine beta-synthase and other proteins. FB03_02585 SM01091 Transporter associated domain FB03_02605 SM00271 DnaJ molecular chaperone homology domain FB03_02630 SM00729 Elongator protein 3, MiaB family, Radical SAM FB03_02640 SM00838 Elongation factor G C-terminus FB03_02665 SM01002 Alanine dehydrogenase/PNT, C-terminal domain FB03_02665 SM01003 Alanine dehydrogenase/PNT, N-terminal domain FB03_02735 SM00382 ATPases associated with a variety of cellular activities FB03_02745 SM00855 Phosphoglycerate mutase family FB03_02805 SM00316 Ribosomal protein S1-like RNA-binding domain FB03_02820 SM00382 ATPases associated with a variety of cellular activities FB03_02825 SM00382 ATPases associated with a variety of cellular activities FB03_02830 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FB03_02830 SM00387 Histidine kinase-like ATPases FB03_02835 SM00421 helix_turn_helix, Lux Regulon FB03_02835 SM00448 cheY-homologous receiver domain FB03_02840 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain FB03_02840 SM01232 FB03_02840 FB03_02845 SM00358 Double-stranded RNA binding motif FB03_02845 SM00535 Ribonuclease III family FB03_02870 SM00487 DEAD-like helicases superfamily FB03_02870 SM00490 helicase superfamily c-terminal domain FB03_02890 SM00829 Enoylreductase FB03_02925 SM00346 helix_turn_helix isocitrate lyase regulation FB03_03030 SM00849 Metallo-beta-lactamase superfamily FB03_03060 SM00487 DEAD-like helicases superfamily FB03_03075 SM00411 bacterial (prokaryotic) histone like domain FB03_03125 SM00530 Helix-turn-helix XRE-family like proteins FB03_03180 SM00382 ATPases associated with a variety of cellular activities FB03_03235 SM00382 ATPases associated with a variety of cellular activities FB03_03245 SM00487 DEAD-like helicases superfamily FB03_03245 SM00490 helicase superfamily c-terminal domain FB03_03260 SM00481 DNA polymerase alpha chain like domain FB03_03265 SM01011 Aminopeptidase P, N-terminal domain FB03_03380 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. FB03_03390 SM00878 Biotin carboxylase C-terminal domain FB03_03400 SM00062 Bacterial periplasmic substrate-binding proteins FB03_03410 SM00382 ATPases associated with a variety of cellular activities FB03_03465 SM01091 Transporter associated domain FB03_03510 SM00382 ATPases associated with a variety of cellular activities FB03_03595 SM00345 helix_turn_helix gluconate operon transcriptional repressor FB03_03610 SM01002 Alanine dehydrogenase/PNT, C-terminal domain FB03_03610 SM01003 Alanine dehydrogenase/PNT, N-terminal domain FB03_03625 SM01240 FB03_03625 FB03_03635 SM00479 FB03_03635 FB03_03640 SM00116 Domain in cystathionine beta-synthase and other proteins. FB03_03640 SM01240 FB03_03640 FB03_03655 SM00560 LamG-like jellyroll fold domain FB03_03675 SM00883 Chaperonin 10 Kd subunit FB03_03720 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FB03_03750 SM01005 Alanine racemase, C-terminal domain FB03_03800 SM00662 RNA polymerases D FB03_03820 SM00316 Ribosomal protein S1-like RNA-binding domain FB03_03880 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. FB03_03885 SM01374 FB03_03885 FB03_03905 SM00322 K homology RNA-binding domain FB03_03920 SM01382 FB03_03920 FB03_03920 SM01383 FB03_03920 FB03_03940 SM01403 FB03_03940 FB03_03950 SM00829 Enoylreductase FB03_03965 SM00838 Elongation factor G C-terminus FB03_03965 SM00889 Elongation factor G, domain IV FB03_03980 SM00663 RNA polymerase I subunit A N-terminus FB03_04015 SM00649 Ribosomal protein L11/L12 FB03_04020 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. FB03_04040 SM00098 Alkaline phosphatase homologues FB03_04100 SM00909 Sporulation and spore germination FB03_04110 SM00448 cheY-homologous receiver domain FB03_04110 SM00862 Transcriptional regulatory protein, C terminal FB03_04205 SM00382 ATPases associated with a variety of cellular activities FB03_04290 SM00984 UDP binding domain FB03_04295 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. FB03_04320 SM00387 Histidine kinase-like ATPases FB03_04320 SM00388 His Kinase A (phosphoacceptor) domain FB03_04325 SM00448 cheY-homologous receiver domain FB03_04325 SM00862 Transcriptional regulatory protein, C terminal FB03_04360 SM00838 Elongation factor G C-terminus FB03_04375 SM00382 ATPases associated with a variety of cellular activities FB03_04550 SM01192 FB03_04550 FB03_04550 SM01193 FB03_04550 FB03_04565 SM00487 DEAD-like helicases superfamily FB03_04565 SM00490 helicase superfamily c-terminal domain FB03_04565 SM00982 FB03_04565 FB03_04565 SM01058 CarD-like/TRCF domain FB03_04595 SM01400 FB03_04595 FB03_04625 SM00382 ATPases associated with a variety of cellular activities FB03_04640 SM01208 FB03_04640 FB03_04665 SM00421 helix_turn_helix, Lux Regulon FB03_04755 SM00382 ATPases associated with a variety of cellular activities FB03_04775 SM00530 Helix-turn-helix XRE-family like proteins FB03_04790 SM00852 Probable molybdopterin binding domain FB03_04800 SM00858 FB03_04800 FB03_04860 SM00529 Helix-turn-helix diphteria tox regulatory element FB03_04885 SM00357 Cold shock protein domain FB03_04900 SM00448 cheY-homologous receiver domain FB03_04900 SM00862 Transcriptional regulatory protein, C terminal FB03_04940 SM00986 Uracil DNA glycosylase superfamily FB03_04940 SM00987 UreE urease accessory protein, C-terminal domain FB03_04990 SM00220 Serine/Threonine protein kinases, catalytic domain FB03_05005 SM00859 Semialdehyde dehydrogenase, NAD binding domain FB03_05015 SM00493 FB03_05015 FB03_05020 SM00382 ATPases associated with a variety of cellular activities FB03_05065 SM00967 RNA 2'-O ribose methyltransferase substrate binding FB03_05070 SM00840 FB03_05070 FB03_05080 SM01058 CarD-like/TRCF domain FB03_05085 SM00448 cheY-homologous receiver domain FB03_05085 SM00862 Transcriptional regulatory protein, C terminal FB03_05105 SM00382 ATPases associated with a variety of cellular activities FB03_05120 SM00855 Phosphoglycerate mutase family FB03_05150 SM00382 ATPases associated with a variety of cellular activities FB03_05165 SM00062 Bacterial periplasmic substrate-binding proteins FB03_05175 SM00382 ATPases associated with a variety of cellular activities FB03_05225 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain FB03_05225 SM00437 Bacterial DNA topoisomerase I DNA-binding domain FB03_05225 SM00493 FB03_05225 FB03_05290 SM00100 Cyclic nucleotide-monophosphate binding domain FB03_05290 SM00419 helix_turn_helix, cAMP Regulatory protein FB03_05400 SM00829 Enoylreductase FB03_05440 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FB03_05455 SM00346 helix_turn_helix isocitrate lyase regulation FB03_05480 SM01266 FB03_05480 FB03_05510 SM00421 helix_turn_helix, Lux Regulon FB03_05525 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FB03_05530 SM00345 helix_turn_helix gluconate operon transcriptional repressor FB03_05530 SM00866 FB03_05530 FB03_05560 SM00346 helix_turn_helix isocitrate lyase regulation FB03_05605 SM00382 ATPases associated with a variety of cellular activities FB03_05645 SM00382 ATPases associated with a variety of cellular activities FB03_05645 SM01086 C-terminal, D2-small domain, of ClpB protein FB03_05680 SM00382 ATPases associated with a variety of cellular activities FB03_05825 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FB03_05835 SM00788 Adenylosuccinate synthetase FB03_05870 SM00642 Alpha-amylase domain FB03_05885 SM00028 Tetratricopeptide repeats FB03_05955 SM00382 ATPases associated with a variety of cellular activities FB03_06030 SM00382 ATPases associated with a variety of cellular activities FB03_06030 SM00487 DEAD-like helicases superfamily FB03_06030 SM00490 helicase superfamily c-terminal domain FB03_06030 SM00847 Helicase associated domain (HA2) Add an annotation FB03_06045 SM00226 Low molecular weight phosphatase family FB03_06050 SM00382 ATPases associated with a variety of cellular activities FB03_06090 SM01130 FB03_06090 FB03_06095 SM00382 ATPases associated with a variety of cellular activities FB03_06100 SM00382 ATPases associated with a variety of cellular activities FB03_06215 SM00487 DEAD-like helicases superfamily FB03_06215 SM00490 helicase superfamily c-terminal domain FB03_06220 SM00421 helix_turn_helix, Lux Regulon FB03_06220 SM00448 cheY-homologous receiver domain FB03_06230 SM00382 ATPases associated with a variety of cellular activities FB03_06295 SM00954 Region found in RelA / SpoT proteins FB03_06355 SM00974 FB03_06355 FB03_06385 SM01133 FB03_06385 FB03_06390 SM00345 helix_turn_helix gluconate operon transcriptional repressor FB03_06390 SM00866 FB03_06390 FB03_06415 SM00563 Phosphate acyltransferases FB03_06450 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FB03_06460 SM00382 ATPases associated with a variety of cellular activities FB03_06520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FB03_06560 SM00470 ParB-like nuclease domain FB03_06575 SM00393 Putative single-stranded nucleic acids-binding domain FB03_06590 SM00382 ATPases associated with a variety of cellular activities FB03_06590 SM00760 Bacterial dnaA protein helix-turn-helix domain FB03_06595 SM00480 DNA polymerase III beta subunit FB03_06620 SM00434 DNA Topoisomerase IV FB03_06655 SM00345 helix_turn_helix gluconate operon transcriptional repressor FB03_06655 SM00866 FB03_06655 FB03_06665 SM01133 FB03_06665 FB03_06685 SM01007 Class II Aldolase and Adducin N-terminal domain FB03_06780 SM00220 Serine/Threonine protein kinases, catalytic domain FB03_06780 SM00740 FB03_06780 FB03_06795 SM00331 Sigma factor PP2C-like phosphatases FB03_06795 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain FB03_06800 SM00240 Forkhead associated domain FB03_06805 SM00240 Forkhead associated domain FB03_06820 SM00382 ATPases associated with a variety of cellular activities FB03_06835 SM00382 ATPases associated with a variety of cellular activities FB03_06860 SM00506 Appr-1"-p processing enzyme FB03_06935 SM01130 FB03_06935 FB03_06945 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FB03_06955 SM00346 helix_turn_helix isocitrate lyase regulation FB03_06960 SM01130 FB03_06960 FB03_06975 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FB03_06995 SM00710 Parallel beta-helix repeats FB03_07195 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family FB03_07205 SM01007 Class II Aldolase and Adducin N-terminal domain FB03_07220 SM00382 ATPases associated with a variety of cellular activities FB03_07240 SM01350 FB03_07240 FB03_07245 SM00530 Helix-turn-helix XRE-family like proteins FB03_07275 SM00382 ATPases associated with a variety of cellular activities FB03_07385 SM00829 Enoylreductase FB03_07485 SM00382 ATPases associated with a variety of cellular activities FB03_07505 SM00382 ATPases associated with a variety of cellular activities FB03_07510 SM00382 ATPases associated with a variety of cellular activities FB03_07610 SM00966 SpoVT / AbrB like domain FB03_07675 SM00382 ATPases associated with a variety of cellular activities FB03_07685 SM00421 helix_turn_helix, Lux Regulon FB03_07685 SM00448 cheY-homologous receiver domain FB03_07725 SM00271 DnaJ molecular chaperone homology domain FB03_07735 SM00382 ATPases associated with a variety of cellular activities FB03_07780 SM00642 Alpha-amylase domain FB03_07795 SM00421 helix_turn_helix, Lux Regulon FB03_07795 SM00448 cheY-homologous receiver domain FB03_07865 SM00382 ATPases associated with a variety of cellular activities FB03_07870 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain FB03_07870 SM01232 FB03_07870 FB03_07920 SM00382 ATPases associated with a variety of cellular activities FB03_08010 SM00382 ATPases associated with a variety of cellular activities FB03_08120 SM00382 ATPases associated with a variety of cellular activities FB03_08135 SM00530 Helix-turn-helix XRE-family like proteins FB03_08160 SM00347 helix_turn_helix multiple antibiotic resistance protein FB03_08165 SM00855 Phosphoglycerate mutase family FB03_08195 SM00957 SecA DEAD-like domain FB03_08195 SM00958 SecA preprotein cross-linking domain FB03_08205 SM00257 Lysin motif FB03_08315 SM00382 ATPases associated with a variety of cellular activities FB03_08345 SM01091 Transporter associated domain FB03_08350 SM00116 Domain in cystathionine beta-synthase and other proteins. FB03_08365 SM00829 Enoylreductase FB03_08375 SM00836 DALR anticodon binding domain FB03_08375 SM01016 Arginyl tRNA synthetase N terminal dom FB03_08410 SM00937 FB03_08410 FB03_08465 SM00382 ATPases associated with a variety of cellular activities FB03_08535 SM00642 Alpha-amylase domain FB03_08540 SM00354 helix_turn _helix lactose operon repressor FB03_08560 SM00642 Alpha-amylase domain FB03_08570 SM00642 Alpha-amylase domain FB03_08575 SM00642 Alpha-amylase domain FB03_08590 SM00642 Alpha-amylase domain FB03_08610 SM00341 Helicase and RNase D C-terminal FB03_08685 SM00487 DEAD-like helicases superfamily FB03_08685 SM00491 FB03_08685 FB03_08695 SM01134 FB03_08695 FB03_08725 SM01133 FB03_08725 FB03_08775 SM00640 Glycosyl hydrolases family 32 FB03_08900 SM00387 Histidine kinase-like ATPases FB03_08910 SM00292 breast cancer carboxy-terminal domain FB03_08910 SM00532 Ligase N family FB03_08915 SM00155 Phospholipase D. Active site motifs. FB03_08930 SM00845 GatB domain FB03_08935 SM00919 Malic enzyme, NAD binding domain FB03_08935 SM01274 FB03_08935 FB03_08960 SM00382 ATPases associated with a variety of cellular activities FB03_09025 SM01329 FB03_09025 FB03_09055 SM01101 FB03_09055 FB03_09105 SM00382 ATPases associated with a variety of cellular activities FB03_09115 SM00487 DEAD-like helicases superfamily FB03_09115 SM00490 helicase superfamily c-terminal domain