AEQU_0001 PF00308 Bacterial dnaA protein AEQU_0001 PF08299 Bacterial dnaA protein helix-turn-helix AEQU_0001 PF11638 DnaA N-terminal domain AEQU_0002 PF00468 Ribosomal protein L34 AEQU_0005 PF02096 60Kd inner membrane protein AEQU_0006 PF01424 R3H domain AEQU_0006 PF13083 KH domain AEQU_0007 PF02527 rRNA small subunit methyltransferase G AEQU_0008 PF13614 AAA domain AEQU_0009 PF02195 ParB-like nuclease domain AEQU_0010 PF01820 D-ala D-ala ligase N-terminus AEQU_0010 PF07478 D-ala D-ala ligase C-terminus AEQU_0012 PF00929 Exonuclease AEQU_0012 PF13307 Helicase C-terminal domain AEQU_0015 PF01250 Ribosomal protein S6 AEQU_0016 PF00436 Single-strand binding protein family AEQU_0017 PF01084 Ribosomal protein S18 AEQU_0018 PF01281 Ribosomal protein L9, N-terminal domain AEQU_0018 PF03948 Ribosomal protein L9, C-terminal domain AEQU_0019 PF00772 DnaB-like helicase N terminal domain AEQU_0019 PF03796 DnaB-like helicase C terminal domain AEQU_0020 PF00149 Calcineurin-like phosphoesterase AEQU_0021 PF13514 AAA domain AEQU_0023 PF00709 Adenylosuccinate synthetase AEQU_0024 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AEQU_0024 PF02843 Phosphoribosylglycinamide synthetase, C domain AEQU_0024 PF02844 Phosphoribosylglycinamide synthetase, N domain AEQU_0025 PF04055 Radical SAM superfamily AEQU_0026 PF01478 Type IV leader peptidase family AEQU_0027 PF01385 AEQU_0027 AEQU_0027 PF07282 AEQU_0027 AEQU_0027 PF12323 AEQU_0027 AEQU_0028 PF12850 Calcineurin-like phosphoesterase superfamily domain AEQU_0029 PF00990 GGDEF domain AEQU_0029 PF08447 PAS fold AEQU_0031 PF03807 NADP oxidoreductase coenzyme F420-dependent AEQU_0031 PF14748 Pyrroline-5-carboxylate reductase dimerisation AEQU_0032 PF13520 Amino acid permease AEQU_0033 PF03069 Acetamidase/Formamidase family AEQU_0034 PF12900 Pyridoxamine 5'-phosphate oxidase AEQU_0036 PF01569 PAP2 superfamily AEQU_0037 PF01381 Helix-turn-helix AEQU_0039 PF00155 Aminotransferase class I and II AEQU_0041 PF00881 Nitroreductase family AEQU_0041 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AEQU_0043 PF13614 AAA domain AEQU_0044 PF02195 ParB-like nuclease domain AEQU_0045 PF04203 Sortase family AEQU_0046 PF00877 NlpC/P60 family AEQU_0048 PF02384 N-6 DNA Methylase AEQU_0048 PF04851 Type III restriction enzyme, res subunit AEQU_0050 PF05869 AEQU_0050 AEQU_0051 PF00145 C-5 cytosine-specific DNA methylase AEQU_0052 PF14022 AEQU_0052 AEQU_0053 PF13155 Toprim-like AEQU_0054 PF07751 AEQU_0054 AEQU_0055 PF05713 AEQU_0055 AEQU_0056 PF03432 AEQU_0056 AEQU_0057 PF12687 AEQU_0057 AEQU_0059 PF02534 Type IV secretory system Conjugative DNA transfer AEQU_0062 PF12666 AEQU_0062 AEQU_0063 PF01935 Domain of unknown function DUF87 AEQU_0064 PF05257 CHAP domain AEQU_0065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AEQU_0066 PF00528 Binding-protein-dependent transport system inner membrane component AEQU_0067 PF00528 Binding-protein-dependent transport system inner membrane component AEQU_0068 PF00005 ABC transporter AEQU_0069 PF00975 Thioesterase domain AEQU_0070 PF00939 Sodium:sulfate symporter transmembrane region AEQU_0072 PF00501 AMP-binding enzyme AEQU_0072 PF00550 Phosphopantetheine attachment site AEQU_0072 PF00668 Condensation domain AEQU_0072 PF00975 Thioesterase domain AEQU_0072 PF08242 Methyltransferase domain AEQU_0073 PF00501 AMP-binding enzyme AEQU_0073 PF00550 Phosphopantetheine attachment site AEQU_0073 PF00668 Condensation domain AEQU_0073 PF08242 Methyltransferase domain AEQU_0073 PF13193 AMP-binding enzyme C-terminal domain AEQU_0074 PF00501 AMP-binding enzyme AEQU_0074 PF00550 Phosphopantetheine attachment site AEQU_0074 PF00668 Condensation domain AEQU_0075 PF00501 AMP-binding enzyme AEQU_0075 PF13193 AMP-binding enzyme C-terminal domain AEQU_0076 PF00005 ABC transporter AEQU_0076 PF00664 ABC transporter transmembrane region AEQU_0077 PF00005 ABC transporter AEQU_0077 PF00664 ABC transporter transmembrane region AEQU_0078 PF02742 Iron dependent repressor, metal binding and dimerisation domain AEQU_0079 PF00438 S-adenosylmethionine synthetase, N-terminal domain AEQU_0079 PF02772 S-adenosylmethionine synthetase, central domain AEQU_0079 PF02773 S-adenosylmethionine synthetase, C-terminal domain AEQU_0080 PF00291 Pyridoxal-phosphate dependent enzyme AEQU_0081 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AEQU_0081 PF05221 S-adenosyl-L-homocysteine hydrolase AEQU_0082 PF01648 4'-phosphopantetheinyl transferase superfamily AEQU_0084 PF02452 PemK-like protein AEQU_0085 PF00589 Phage integrase family AEQU_0087 PF14512 Putative TM nitroreductase AEQU_0088 PF00171 Aldehyde dehydrogenase family AEQU_0089 PF00106 short chain dehydrogenase AEQU_0090 PF13419 Haloacid dehalogenase-like hydrolase AEQU_0091 PF04892 AEQU_0091 AEQU_0092 PF01370 NAD dependent epimerase/dehydratase family AEQU_0093 PF00746 AEQU_0093 AEQU_0093 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) AEQU_0094 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AEQU_0094 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AEQU_0094 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AEQU_0094 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AEQU_0095 PF13173 AAA domain AEQU_0095 PF13635 AEQU_0095 AEQU_0098 PF01402 Ribbon-helix-helix protein, copG family AEQU_0098 PF08753 NikR C terminal nickel binding domain AEQU_0099 PF00586 AIR synthase related protein, N-terminal domain AEQU_0099 PF02769 AIR synthase related protein, C-terminal domain AEQU_0100 PF13187 4Fe-4S dicluster domain AEQU_0102 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) AEQU_0103 PF13412 Winged helix-turn-helix DNA-binding AEQU_0105 PF00012 Hsp70 protein AEQU_0106 PF01025 GrpE AEQU_0107 PF00226 DnaJ domain AEQU_0107 PF01556 DnaJ C terminal domain AEQU_0108 PF13411 MerR HTH family regulatory protein AEQU_0109 PF00004 ATPase family associated with various cellular activities (AAA) AEQU_0109 PF02861 Clp amino terminal domain AEQU_0109 PF07724 AAA domain (Cdc48 subfamily) AEQU_0109 PF10431 C-terminal, D2-small domain, of ClpB protein AEQU_0110 PF04480 Protein of unknown function (DUF559) AEQU_0111 PF01906 Putative heavy-metal-binding AEQU_0112 PF00375 Sodium:dicarboxylate symporter family AEQU_0113 PF01546 Peptidase family M20/M25/M40 AEQU_0114 PF00072 Response regulator receiver domain AEQU_0114 PF04397 LytTr DNA-binding domain AEQU_0115 PF00342 Phosphoglucose isomerase AEQU_0116 PF00708 Acylphosphatase AEQU_0116 PF01300 Telomere recombination AEQU_0116 PF07503 HypF finger AEQU_0117 PF01455 HupF/HypC family AEQU_0118 PF01924 Hydrogenase formation hypA family AEQU_0119 PF01541 GIY-YIG catalytic domain AEQU_0121 PF00665 Integrase core domain AEQU_0122 PF01527 Transposase AEQU_0123 PF09424 Yqey-like protein AEQU_0124 PF02687 AEQU_0124 AEQU_0125 PF00005 ABC transporter AEQU_0126 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_0127 PF00072 Response regulator receiver domain AEQU_0127 PF00486 Transcriptional regulatory protein, C terminal AEQU_0130 PF03703 AEQU_0130 AEQU_0131 PF03703 AEQU_0131 AEQU_0132 PF00571 CBS domain AEQU_0132 PF03471 Transporter associated domain AEQU_0134 PF02254 TrkA-N domain AEQU_0135 PF02080 TrkA-C domain AEQU_0135 PF02254 TrkA-N domain AEQU_0136 PF09972 AEQU_0136 AEQU_0137 PF01202 Shikimate kinase AEQU_0138 PF01235 AEQU_0138 AEQU_0139 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AEQU_0139 PF12804 MobA-like NTP transferase domain AEQU_0140 PF00037 4Fe-4S binding domain AEQU_0141 PF00497 Bacterial extracellular solute-binding proteins, family 3 AEQU_0142 PF00528 Binding-protein-dependent transport system inner membrane component AEQU_0143 PF00005 ABC transporter AEQU_0144 PF13180 PDZ domain AEQU_0144 PF13365 Trypsin-like peptidase domain AEQU_0145 PF04055 Radical SAM superfamily AEQU_0145 PF13353 4Fe-4S single cluster domain AEQU_0146 PF13443 Cro/C1-type HTH DNA-binding domain AEQU_0149 PF13443 Cro/C1-type HTH DNA-binding domain AEQU_0150 PF01381 Helix-turn-helix AEQU_0151 PF00696 Amino acid kinase family AEQU_0152 PF01765 Ribosome recycling factor AEQU_0153 PF01255 Putative undecaprenyl diphosphate synthase AEQU_0154 PF01148 Cytidylyltransferase family AEQU_0155 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AEQU_0155 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal AEQU_0155 PF13288 DXP reductoisomerase C-terminal domain AEQU_0157 PF02163 Peptidase family M50 AEQU_0158 PF04551 GcpE protein AEQU_0159 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AEQU_0159 PF03129 Anticodon binding domain AEQU_0159 PF04073 Aminoacyl-tRNA editing domain AEQU_0160 PF01381 Helix-turn-helix AEQU_0162 PF00588 SpoU rRNA Methylase family AEQU_0162 PF08032 RNA 2'-O ribose methyltransferase substrate binding AEQU_0163 PF05991 AEQU_0163 AEQU_0164 PF01381 Helix-turn-helix AEQU_0165 PF13151 AEQU_0165 AEQU_0166 PF01381 Helix-turn-helix AEQU_0167 PF01381 Helix-turn-helix AEQU_0168 PF13349 AEQU_0168 AEQU_0169 PF13180 PDZ domain AEQU_0169 PF13365 Trypsin-like peptidase domain AEQU_0170 PF00196 Bacterial regulatory proteins, luxR family AEQU_0171 PF02613 Nitrate reductase delta subunit AEQU_0172 PF00384 Molybdopterin oxidoreductase AEQU_0172 PF01568 Molydopterin dinucleotide binding domain AEQU_0172 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_0172 PF10518 TAT (twin-arginine translocation) pathway signal sequence AEQU_0173 PF13247 4Fe-4S dicluster domain AEQU_0174 PF03916 AEQU_0174 AEQU_0175 PF00004 ATPase family associated with various cellular activities (AAA) AEQU_0176 PF09967 AEQU_0176 AEQU_0176 PF13203 AEQU_0176 AEQU_0178 PF01661 Macro domain AEQU_0179 PF00583 Acetyltransferase (GNAT) family AEQU_0180 PF09820 AEQU_0180 AEQU_0181 PF07690 Major Facilitator Superfamily AEQU_0182 PF00072 Response regulator receiver domain AEQU_0182 PF00486 Transcriptional regulatory protein, C terminal AEQU_0183 PF00512 His Kinase A (phospho-acceptor) domain AEQU_0183 PF00672 HAMP domain AEQU_0183 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_0183 PF11845 AEQU_0183 AEQU_0184 PF00384 Molybdopterin oxidoreductase AEQU_0184 PF01568 Molydopterin dinucleotide binding domain AEQU_0185 PF13247 4Fe-4S dicluster domain AEQU_0186 PF02687 AEQU_0186 AEQU_0187 PF00005 ABC transporter AEQU_0189 PF14387 AEQU_0189 AEQU_0190 PF13151 AEQU_0190 AEQU_0191 PF13560 Helix-turn-helix domain AEQU_0192 PF00196 Bacterial regulatory proteins, luxR family AEQU_0193 PF00384 Molybdopterin oxidoreductase AEQU_0193 PF01568 Molydopterin dinucleotide binding domain AEQU_0193 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_0194 PF12800 4Fe-4S binding domain AEQU_0194 PF13247 4Fe-4S dicluster domain AEQU_0195 PF12800 4Fe-4S binding domain AEQU_0195 PF13247 4Fe-4S dicluster domain AEQU_0196 PF02613 Nitrate reductase delta subunit AEQU_0197 PF04976 AEQU_0197 AEQU_0198 PF00196 Bacterial regulatory proteins, luxR family AEQU_0199 PF00890 FAD binding domain AEQU_0200 PF01402 Ribbon-helix-helix protein, copG family AEQU_0202 PF12850 Calcineurin-like phosphoesterase superfamily domain AEQU_0203 PF02219 Methylenetetrahydrofolate reductase AEQU_0205 PF00809 Pterin binding enzyme AEQU_0205 PF02310 B12 binding domain AEQU_0205 PF02574 Homocysteine S-methyltransferase AEQU_0205 PF02607 B12 binding domain AEQU_0207 PF10609 ParA/MinD ATPase like AEQU_0208 PF00639 PPIC-type PPIASE domain AEQU_0208 PF13624 SurA N-terminal domain AEQU_0209 PF01979 Amidohydrolase family AEQU_0211 PF00009 Elongation factor Tu GTP binding domain AEQU_0211 PF00679 Elongation factor G C-terminus AEQU_0211 PF03144 Elongation factor Tu domain 2 AEQU_0211 PF03764 Elongation factor G, domain IV AEQU_0211 PF14492 Elongation Factor G, domain II AEQU_0212 PF00562 RNA polymerase Rpb2, domain 6 AEQU_0212 PF04560 RNA polymerase Rpb2, domain 7 AEQU_0212 PF04561 RNA polymerase Rpb2, domain 2 AEQU_0212 PF04563 RNA polymerase beta subunit AEQU_0212 PF04565 RNA polymerase Rpb2, domain 3 AEQU_0212 PF10385 RNA polymerase beta subunit external 1 domain AEQU_0213 PF00623 RNA polymerase Rpb1, domain 2 AEQU_0213 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AEQU_0213 PF04983 RNA polymerase Rpb1, domain 3 AEQU_0213 PF04997 RNA polymerase Rpb1, domain 1 AEQU_0213 PF04998 RNA polymerase Rpb1, domain 5 AEQU_0213 PF05000 RNA polymerase Rpb1, domain 4 AEQU_0214 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_0214 PF03466 LysR substrate binding domain AEQU_0215 PF00037 4Fe-4S binding domain AEQU_0215 PF13187 4Fe-4S dicluster domain AEQU_0217 PF02613 Nitrate reductase delta subunit AEQU_0220 PF00384 Molybdopterin oxidoreductase AEQU_0220 PF01568 Molydopterin dinucleotide binding domain AEQU_0220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_0220 PF10518 TAT (twin-arginine translocation) pathway signal sequence AEQU_0221 PF13247 4Fe-4S dicluster domain AEQU_0222 PF13273 AEQU_0222 AEQU_0224 PF12837 4Fe-4S binding domain AEQU_0225 PF12801 AEQU_0225 AEQU_0226 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AEQU_0227 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AEQU_0227 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AEQU_0227 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AEQU_0227 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AEQU_0228 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AEQU_0230 PF00209 Sodium:neurotransmitter symporter family AEQU_0232 PF03483 B3/4 domain AEQU_0233 PF00893 Small Multidrug Resistance protein AEQU_0234 PF07804 HipA-like C-terminal domain AEQU_0235 PF00196 Bacterial regulatory proteins, luxR family AEQU_0237 PF00384 Molybdopterin oxidoreductase AEQU_0237 PF01568 Molydopterin dinucleotide binding domain AEQU_0237 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_0238 PF13247 4Fe-4S dicluster domain AEQU_0239 PF04976 AEQU_0239 AEQU_0240 PF02613 Nitrate reductase delta subunit AEQU_0241 PF12837 4Fe-4S binding domain AEQU_0241 PF13187 4Fe-4S dicluster domain AEQU_0242 PF00037 4Fe-4S binding domain AEQU_0242 PF12801 AEQU_0242 AEQU_0243 PF13560 Helix-turn-helix domain AEQU_0244 PF13151 AEQU_0244 AEQU_0247 PF02503 Polyphosphate kinase middle domain AEQU_0247 PF13089 Polyphosphate kinase N-terminal domain AEQU_0247 PF13090 Polyphosphate kinase C-terminal domain AEQU_0248 PF03976 Polyphosphate kinase 2 (PPK2) AEQU_0249 PF04203 Sortase family AEQU_0250 PF00156 Phosphoribosyl transferase domain AEQU_0250 PF13537 Glutamine amidotransferase domain AEQU_0251 PF00586 AIR synthase related protein, N-terminal domain AEQU_0251 PF02769 AIR synthase related protein, C-terminal domain AEQU_0252 PF00551 Formyl transferase AEQU_0253 PF13478 XdhC Rossmann domain AEQU_0254 PF07826 IMP cyclohydrolase-like protein AEQU_0255 PF01808 AICARFT/IMPCHase bienzyme AEQU_0256 PF14478 Domain of unknown function (DUF4430) AEQU_0257 PF13535 ATP-grasp domain AEQU_0258 PF03706 AEQU_0258 AEQU_0259 PF03061 Thioesterase superfamily AEQU_0260 PF00871 Acetokinase family AEQU_0261 PF00890 FAD binding domain AEQU_0262 PF00196 Bacterial regulatory proteins, luxR family AEQU_0263 PF00092 von Willebrand factor type A domain AEQU_0263 PF12034 AEQU_0263 AEQU_0263 PF12450 AEQU_0263 AEQU_0264 PF06262 Possibl zinc metallo-peptidase AEQU_0265 PF02416 mttA/Hcf106 family AEQU_0266 PF01272 Transcription elongation factor, GreA/GreB, C-term AEQU_0266 PF03449 Transcription elongation factor, N-terminal AEQU_0267 PF00152 tRNA synthetases class II (D, K and N) AEQU_0267 PF01336 OB-fold nucleic acid binding domain AEQU_0267 PF01588 Putative tRNA binding domain AEQU_0268 PF00520 Ion transport protein AEQU_0269 PF00004 ATPase family associated with various cellular activities (AAA) AEQU_0269 PF02151 UvrB/uvrC motif AEQU_0269 PF02861 Clp amino terminal domain AEQU_0269 PF07724 AAA domain (Cdc48 subfamily) AEQU_0269 PF10431 C-terminal, D2-small domain, of ClpB protein AEQU_0270 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AEQU_0271 PF02542 YgbB family AEQU_0272 PF01381 Helix-turn-helix AEQU_0273 PF04542 Sigma-70 region 2 AEQU_0273 PF08281 Sigma-70, region 4 AEQU_0275 PF04607 Region found in RelA / SpoT proteins AEQU_0276 PF01381 Helix-turn-helix AEQU_0278 PF01406 tRNA synthetases class I (C) catalytic domain AEQU_0278 PF09190 DALR domain AEQU_0279 PF00890 FAD binding domain AEQU_0279 PF10518 TAT (twin-arginine translocation) pathway signal sequence AEQU_0280 PF00196 Bacterial regulatory proteins, luxR family AEQU_0281 PF01136 AEQU_0281 AEQU_0282 PF07905 AEQU_0282 AEQU_0282 PF13556 PucR C-terminal helix-turn-helix domain AEQU_0284 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AEQU_0285 PF01118 Semialdehyde dehydrogenase, NAD binding domain AEQU_0285 PF02774 Semialdehyde dehydrogenase, dimerisation domain AEQU_0286 PF01960 ArgJ family AEQU_0287 PF00696 Amino acid kinase family AEQU_0288 PF00202 Aminotransferase class-III AEQU_0289 PF00764 Arginosuccinate synthase AEQU_0290 PF00206 Lyase AEQU_0290 PF14698 Argininosuccinate lyase C-terminal AEQU_0291 PF00905 Penicillin binding protein transpeptidase domain AEQU_0291 PF00912 Transglycosylase AEQU_0293 PF01136 AEQU_0293 AEQU_0293 PF12392 AEQU_0293 AEQU_0294 PF00579 tRNA synthetases class I (W and Y) AEQU_0294 PF01479 S4 domain AEQU_0296 PF04542 Sigma-70 region 2 AEQU_0296 PF08281 Sigma-70, region 4 AEQU_0299 PF00330 Aconitase family (aconitate hydratase) AEQU_0299 PF00694 Aconitase C-terminal domain AEQU_0300 PF00152 tRNA synthetases class II (D, K and N) AEQU_0300 PF01336 OB-fold nucleic acid binding domain AEQU_0300 PF02938 GAD domain AEQU_0301 PF04221 RelB antitoxin AEQU_0302 PF12798 4Fe-4S binding domain AEQU_0302 PF12800 4Fe-4S binding domain AEQU_0302 PF13247 4Fe-4S dicluster domain AEQU_0303 PF00384 Molybdopterin oxidoreductase AEQU_0303 PF01568 Molydopterin dinucleotide binding domain AEQU_0303 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_0304 PF00037 4Fe-4S binding domain AEQU_0304 PF12798 4Fe-4S binding domain AEQU_0304 PF12837 4Fe-4S binding domain AEQU_0305 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AEQU_0306 PF00146 NADH dehydrogenase AEQU_0307 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AEQU_0308 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AEQU_0309 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AEQU_0309 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AEQU_0309 PF00374 Nickel-dependent hydrogenase AEQU_0310 PF12838 4Fe-4S dicluster domain AEQU_0311 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AEQU_0312 PF07450 AEQU_0312 AEQU_0313 PF01750 Hydrogenase maturation protease AEQU_0314 PF01226 Formate/nitrite transporter AEQU_0315 PF02634 FdhD/NarQ family AEQU_0316 PF00654 Voltage gated chloride channel AEQU_0317 PF13350 Tyrosine phosphatase family AEQU_0319 PF09335 AEQU_0319 AEQU_0321 PF12169 DNA polymerase III subunits gamma and tau domain III AEQU_0321 PF13177 DNA polymerase III, delta subunit AEQU_0322 PF02575 YbaB/EbfC DNA-binding family AEQU_0323 PF02132 RecR protein AEQU_0323 PF13662 Toprim domain AEQU_0324 PF13597 Anaerobic ribonucleoside-triphosphate reductase AEQU_0325 PF00196 Bacterial regulatory proteins, luxR family AEQU_0326 PF03606 AEQU_0326 AEQU_0330 PF03235 AEQU_0330 AEQU_0331 PF05168 HEPN domain AEQU_0332 PF01909 Nucleotidyltransferase domain AEQU_0334 PF00557 Metallopeptidase family M24 AEQU_0334 PF02810 SEC-C motif AEQU_0335 PF00440 Bacterial regulatory proteins, tetR family AEQU_0336 PF00892 EamA-like transporter family AEQU_0337 PF02633 Creatinine amidohydrolase AEQU_0338 PF07690 Major Facilitator Superfamily AEQU_0339 PF07690 Major Facilitator Superfamily AEQU_0340 PF13197 AEQU_0340 AEQU_0341 PF00226 DnaJ domain AEQU_0342 PF06541 AEQU_0342 AEQU_0345 PF09989 AEQU_0345 AEQU_0347 PF01869 BadF/BadG/BcrA/BcrD ATPase family AEQU_0348 PF02613 Nitrate reductase delta subunit AEQU_0349 PF04976 AEQU_0349 AEQU_0350 PF12800 4Fe-4S binding domain AEQU_0350 PF13247 4Fe-4S dicluster domain AEQU_0351 PF12800 4Fe-4S binding domain AEQU_0351 PF13247 4Fe-4S dicluster domain AEQU_0352 PF00384 Molybdopterin oxidoreductase AEQU_0352 PF01568 Molydopterin dinucleotide binding domain AEQU_0352 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_0353 PF00196 Bacterial regulatory proteins, luxR family AEQU_0354 PF00571 CBS domain AEQU_0354 PF07690 Major Facilitator Superfamily AEQU_0356 PF00384 Molybdopterin oxidoreductase AEQU_0356 PF01568 Molydopterin dinucleotide binding domain AEQU_0356 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_0357 PF12800 4Fe-4S binding domain AEQU_0357 PF13247 4Fe-4S dicluster domain AEQU_0359 PF02613 Nitrate reductase delta subunit AEQU_0360 PF12800 4Fe-4S binding domain AEQU_0360 PF12838 4Fe-4S dicluster domain AEQU_0361 PF00037 4Fe-4S binding domain AEQU_0361 PF12801 AEQU_0361 AEQU_0362 PF00196 Bacterial regulatory proteins, luxR family AEQU_0363 PF13470 AEQU_0363 AEQU_0364 PF08011 AEQU_0364 AEQU_0364 PF09820 AEQU_0364 AEQU_0366 PF07804 HipA-like C-terminal domain AEQU_0368 PF00183 Hsp90 protein AEQU_0368 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_0370 PF00588 SpoU rRNA Methylase family AEQU_0372 PF03819 MazG nucleotide pyrophosphohydrolase domain AEQU_0373 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_0374 PF00890 FAD binding domain AEQU_0375 PF07969 Amidohydrolase family AEQU_0376 PF02274 Amidinotransferase AEQU_0377 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AEQU_0377 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AEQU_0378 PF00696 Amino acid kinase family AEQU_0380 PF00892 EamA-like transporter family AEQU_0382 PF07690 Major Facilitator Superfamily AEQU_0383 PF00440 Bacterial regulatory proteins, tetR family AEQU_0385 PF07690 Major Facilitator Superfamily AEQU_0387 PF00155 Aminotransferase class I and II AEQU_0389 PF00196 Bacterial regulatory proteins, luxR family AEQU_0390 PF01592 NifU-like N terminal domain AEQU_0393 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AEQU_0393 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain AEQU_0394 PF13247 4Fe-4S dicluster domain AEQU_0395 PF00384 Molybdopterin oxidoreductase AEQU_0395 PF01568 Molydopterin dinucleotide binding domain AEQU_0395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_0396 PF13247 4Fe-4S dicluster domain AEQU_0397 PF03916 AEQU_0397 AEQU_0398 PF02557 D-alanyl-D-alanine carboxypeptidase AEQU_0399 PF03852 DNA mismatch endonuclease Vsr AEQU_0400 PF04326 Divergent AAA domain AEQU_0400 PF13749 ATP-dependent DNA helicase recG C-terminal AEQU_0401 PF01174 SNO glutamine amidotransferase family AEQU_0402 PF01680 SOR/SNZ family AEQU_0403 PF00392 Bacterial regulatory proteins, gntR family AEQU_0404 PF12837 4Fe-4S binding domain AEQU_0405 PF01910 Domain of unknown function DUF77 AEQU_0406 PF02110 Hydroxyethylthiazole kinase family AEQU_0407 PF03054 tRNA methyl transferase AEQU_0408 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_0408 PF03466 LysR substrate binding domain AEQU_0409 PF00291 Pyridoxal-phosphate dependent enzyme AEQU_0410 PF00072 Response regulator receiver domain AEQU_0410 PF00512 His Kinase A (phospho-acceptor) domain AEQU_0410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_0410 PF08447 PAS fold AEQU_0411 PF13280 AEQU_0411 AEQU_0412 PF01545 Cation efflux family AEQU_0412 PF16916 AEQU_0412 AEQU_0414 PF00155 Aminotransferase class I and II AEQU_0415 PF00384 Molybdopterin oxidoreductase AEQU_0415 PF01568 Molydopterin dinucleotide binding domain AEQU_0415 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_0416 PF13247 4Fe-4S dicluster domain AEQU_0417 PF06414 Zeta toxin AEQU_0418 PF01381 Helix-turn-helix AEQU_0419 PF00005 ABC transporter AEQU_0419 PF12848 ABC transporter AEQU_0421 PF01451 Low molecular weight phosphotyrosine protein phosphatase AEQU_0422 PF11756 AEQU_0422 AEQU_0424 PF04055 Radical SAM superfamily AEQU_0424 PF16199 AEQU_0424 AEQU_0430 PF14024 AEQU_0430 AEQU_0435 PF12710 haloacid dehalogenase-like hydrolase AEQU_0436 PF02541 Ppx/GppA phosphatase family AEQU_0437 PF04203 Sortase family AEQU_0439 PF09587 Bacterial capsule synthesis protein PGA_cap AEQU_0440 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AEQU_0440 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AEQU_0441 PF03060 Nitronate monooxygenase AEQU_0442 PF00698 Acyl transferase domain AEQU_0443 PF13561 Enoyl-(Acyl carrier protein) reductase AEQU_0444 PF00109 Beta-ketoacyl synthase, N-terminal domain AEQU_0444 PF02801 Beta-ketoacyl synthase, C-terminal domain AEQU_0445 PF07977 FabA-like domain AEQU_0446 PF01039 Carboxyl transferase domain AEQU_0446 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AEQU_0447 PF16654 AEQU_0447 AEQU_0448 PF00512 His Kinase A (phospho-acceptor) domain AEQU_0448 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_0449 PF00072 Response regulator receiver domain AEQU_0449 PF00486 Transcriptional regulatory protein, C terminal AEQU_0450 PF12385 AEQU_0450 AEQU_0451 PF00005 ABC transporter AEQU_0453 PF13828 AEQU_0453 AEQU_0453 PF16729 AEQU_0453 AEQU_0455 PF00069 Protein kinase domain AEQU_0456 PF00588 SpoU rRNA Methylase family AEQU_0458 PF00196 Bacterial regulatory proteins, luxR family AEQU_0459 PF02673 AEQU_0459 AEQU_0460 PF03916 AEQU_0460 AEQU_0461 PF00392 Bacterial regulatory proteins, gntR family AEQU_0462 PF01145 SPFH domain / Band 7 family AEQU_0463 PF01381 Helix-turn-helix AEQU_0464 PF13657 HipA N-terminal domain AEQU_0465 PF07804 HipA-like C-terminal domain AEQU_0468 PF00384 Molybdopterin oxidoreductase AEQU_0468 PF01568 Molydopterin dinucleotide binding domain AEQU_0469 PF12800 4Fe-4S binding domain AEQU_0469 PF13247 4Fe-4S dicluster domain AEQU_0470 PF03916 AEQU_0470 AEQU_0471 PF01909 Nucleotidyltransferase domain AEQU_0472 PF01934 Protein of unknown function DUF86 AEQU_0473 PF03729 AEQU_0473 AEQU_0474 PF01817 Chorismate mutase type II AEQU_0475 PF00793 DAHP synthetase I family AEQU_0476 PF06897 AEQU_0476 AEQU_0479 PF00005 ABC transporter AEQU_0480 PF00005 ABC transporter AEQU_0481 PF02361 Cobalt transport protein AEQU_0483 PF07859 alpha/beta hydrolase fold AEQU_0484 PF13245 Part of AAA domain AEQU_0484 PF13538 UvrD-like helicase C-terminal domain AEQU_0486 PF04397 LytTr DNA-binding domain AEQU_0487 PF03577 AEQU_0487 AEQU_0488 PF07690 Major Facilitator Superfamily AEQU_0489 PF13411 MerR HTH family regulatory protein AEQU_0492 PF00270 DEAD/DEAH box helicase AEQU_0492 PF00271 Helicase conserved C-terminal domain AEQU_0492 PF08494 AEQU_0492 AEQU_0493 PF00196 Bacterial regulatory proteins, luxR family AEQU_0494 PF01909 Nucleotidyltransferase domain AEQU_0495 PF08780 Nucleotidyltransferase substrate binding protein like AEQU_0496 PF03061 Thioesterase superfamily AEQU_0497 PF05336 Domain of unknown function (DUF718) AEQU_0498 PF13560 Helix-turn-helix domain AEQU_0499 PF02274 Amidinotransferase AEQU_0500 PF03606 AEQU_0500 AEQU_0501 PF02274 Amidinotransferase AEQU_0502 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AEQU_0502 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AEQU_0503 PF13173 AAA domain AEQU_0503 PF13635 AEQU_0503 AEQU_0504 PF05167 Uncharacterised ACR (DUF711) AEQU_0505 PF01381 Helix-turn-helix AEQU_0506 PF07804 HipA-like C-terminal domain AEQU_0506 PF13657 HipA N-terminal domain AEQU_0508 PF00069 Protein kinase domain AEQU_0509 PF07724 AAA domain (Cdc48 subfamily) AEQU_0509 PF10431 C-terminal, D2-small domain, of ClpB protein AEQU_0510 PF04055 Radical SAM superfamily AEQU_0510 PF13353 4Fe-4S single cluster domain AEQU_0513 PF00484 Carbonic anhydrase AEQU_0514 PF07751 AEQU_0514 AEQU_0516 PF03916 AEQU_0516 AEQU_0517 PF01145 SPFH domain / Band 7 family AEQU_0518 PF00392 Bacterial regulatory proteins, gntR family AEQU_0519 PF00384 Molybdopterin oxidoreductase AEQU_0519 PF01568 Molydopterin dinucleotide binding domain AEQU_0519 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_0520 PF12800 4Fe-4S binding domain AEQU_0520 PF13247 4Fe-4S dicluster domain AEQU_0521 PF03916 AEQU_0521 AEQU_0523 PF14358 AEQU_0523 AEQU_0524 PF03816 Cell envelope-related transcriptional attenuator domain AEQU_0525 PF00440 Bacterial regulatory proteins, tetR family AEQU_0525 PF14278 AEQU_0525 AEQU_0526 PF01869 BadF/BadG/BcrA/BcrD ATPase family AEQU_0526 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component AEQU_0526 PF09989 AEQU_0526 AEQU_0527 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AEQU_0528 PF01863 Protein of unknown function DUF45 AEQU_0529 PF13470 AEQU_0529 AEQU_0531 PF04203 Sortase family AEQU_0532 PF01592 NifU-like N terminal domain AEQU_0533 PF00266 Aminotransferase class-V AEQU_0534 PF02082 Transcriptional regulator AEQU_0535 PF00072 Response regulator receiver domain AEQU_0535 PF00512 His Kinase A (phospho-acceptor) domain AEQU_0535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_0535 PF02743 Cache domain AEQU_0536 PF08264 Anticodon-binding domain of tRNA AEQU_0536 PF09334 tRNA synthetases class I (M) AEQU_0537 PF01026 TatD related DNase AEQU_0538 PF13560 Helix-turn-helix domain AEQU_0539 PF07804 HipA-like C-terminal domain AEQU_0539 PF13657 HipA N-terminal domain AEQU_0540 PF03358 NADPH-dependent FMN reductase AEQU_0541 PF00398 Ribosomal RNA adenine dimethylase AEQU_0542 PF00150 Cellulase (glycosyl hydrolase family 5) AEQU_0542 PF00553 Cellulose binding domain AEQU_0543 PF13420 Acetyltransferase (GNAT) domain AEQU_0544 PF00270 DEAD/DEAH box helicase AEQU_0544 PF00271 Helicase conserved C-terminal domain AEQU_0544 PF00570 HRDC domain AEQU_0544 PF09382 RQC domain AEQU_0544 PF16124 AEQU_0544 AEQU_0545 PF00180 Isocitrate/isopropylmalate dehydrogenase AEQU_0546 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AEQU_0546 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AEQU_0547 PF06257 Protein of unknown function (DUF1021) AEQU_0548 PF01812 5-formyltetrahydrofolate cyclo-ligase family AEQU_0549 PF00155 Aminotransferase class I and II AEQU_0549 PF00392 Bacterial regulatory proteins, gntR family AEQU_0550 PF12838 4Fe-4S dicluster domain AEQU_0551 PF00384 Molybdopterin oxidoreductase AEQU_0551 PF01568 Molydopterin dinucleotide binding domain AEQU_0551 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_0553 PF03927 NapD protein AEQU_0554 PF12801 AEQU_0554 AEQU_0554 PF13237 4Fe-4S dicluster domain AEQU_0555 PF02335 Cytochrome c552 AEQU_0556 PF03100 CcmE AEQU_0557 PF01578 AEQU_0557 AEQU_0557 PF16327 AEQU_0557 AEQU_0558 PF00005 ABC transporter AEQU_0559 PF03379 AEQU_0559 AEQU_0560 PF01578 AEQU_0560 AEQU_0562 PF13173 AAA domain AEQU_0562 PF13635 AEQU_0562 AEQU_0565 PF04205 FMN-binding domain AEQU_0566 PF00890 FAD binding domain AEQU_0568 PF01047 MarR family AEQU_0568 PF12802 MarR family AEQU_0569 PF02424 ApbE family AEQU_0570 PF00483 Nucleotidyl transferase AEQU_0571 PF05496 Holliday junction DNA helicase ruvB N-terminus AEQU_0571 PF12002 MgsA AAA+ ATPase C terminal AEQU_0571 PF16193 AEQU_0571 AEQU_0573 PF01594 AEQU_0573 AEQU_0574 PF01411 tRNA synthetases class II (A) AEQU_0574 PF02272 DHHA1 domain AEQU_0574 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AEQU_0576 PF02384 N-6 DNA Methylase AEQU_0576 PF12161 HsdM N-terminal domain AEQU_0577 PF01420 Type I restriction modification DNA specificity domain AEQU_0579 PF02661 Fic/DOC family AEQU_0580 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AEQU_0580 PF04851 Type III restriction enzyme, res subunit AEQU_0580 PF12008 Type I restriction and modification enzyme - subunit R C terminal AEQU_0581 PF01420 Type I restriction modification DNA specificity domain AEQU_0582 PF00589 Phage integrase family AEQU_0583 PF10112 AEQU_0583 AEQU_0584 PF05816 AEQU_0584 AEQU_0585 PF03652 Uncharacterised protein family (UPF0081) AEQU_0586 PF02618 YceG-like family AEQU_0587 PF13242 HAD-hyrolase-like AEQU_0588 PF08501 Shikimate dehydrogenase substrate binding domain AEQU_0589 PF00152 tRNA synthetases class II (D, K and N) AEQU_0589 PF01336 OB-fold nucleic acid binding domain AEQU_0590 PF01264 Chorismate synthase AEQU_0591 PF01202 Shikimate kinase AEQU_0592 PF01761 3-dehydroquinate synthase AEQU_0593 PF01220 Dehydroquinase class II AEQU_0594 PF00557 Metallopeptidase family M24 AEQU_0594 PF01321 Creatinase/Prolidase N-terminal domain AEQU_0596 PF01794 AEQU_0596 AEQU_0597 PF02613 Nitrate reductase delta subunit AEQU_0598 PF12800 4Fe-4S binding domain AEQU_0598 PF13247 4Fe-4S dicluster domain AEQU_0599 PF00384 Molybdopterin oxidoreductase AEQU_0599 PF01568 Molydopterin dinucleotide binding domain AEQU_0599 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_0600 PF00196 Bacterial regulatory proteins, luxR family AEQU_0601 PF01132 Elongation factor P (EF-P) OB domain AEQU_0601 PF08207 Elongation factor P (EF-P) KOW-like domain AEQU_0601 PF09285 Elongation factor P, C-terminal AEQU_0602 PF02645 Uncharacterised protein, DegV family COG1307 AEQU_0603 PF00196 Bacterial regulatory proteins, luxR family AEQU_0604 PF00890 FAD binding domain AEQU_0605 PF14537 Cytochrome c3 AEQU_0607 PF00364 Biotin-requiring enzyme AEQU_0607 PF00682 HMGL-like AEQU_0607 PF02436 Conserved carboxylase domain AEQU_0608 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AEQU_0608 PF02785 Biotin carboxylase C-terminal domain AEQU_0608 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AEQU_0609 PF03780 AEQU_0609 AEQU_0610 PF01029 NusB family AEQU_0611 PF02609 Exonuclease VII small subunit AEQU_0612 PF02779 Transketolase, pyrimidine binding domain AEQU_0612 PF02780 Transketolase, C-terminal domain AEQU_0612 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AEQU_0613 PF00583 Acetyltransferase (GNAT) family AEQU_0614 PF00909 Ammonium Transporter Family AEQU_0615 PF00543 Nitrogen regulatory protein P-II AEQU_0616 PF12637 AEQU_0616 AEQU_0617 PF05016 Plasmid stabilisation system protein AEQU_0619 PF01384 AEQU_0619 AEQU_0620 PF00575 S1 RNA binding domain AEQU_0621 PF01121 Dephospho-CoA kinase AEQU_0622 PF00196 Bacterial regulatory proteins, luxR family AEQU_0623 PF00890 FAD binding domain AEQU_0626 PF03601 AEQU_0626 AEQU_0627 PF00271 Helicase conserved C-terminal domain AEQU_0627 PF02151 UvrB/uvrC motif AEQU_0627 PF04851 Type III restriction enzyme, res subunit AEQU_0627 PF12344 Ultra-violet resistance protein B AEQU_0628 PF01522 Polysaccharide deacetylase AEQU_0629 PF02463 RecF/RecN/SMC N terminal domain AEQU_0633 PF01409 tRNA synthetases class II core domain (F) AEQU_0633 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AEQU_0635 PF01588 Putative tRNA binding domain AEQU_0635 PF03147 Ferredoxin-fold anticodon binding domain AEQU_0635 PF03483 B3/4 domain AEQU_0635 PF03484 tRNA synthetase B5 domain AEQU_0636 PF01380 SIS domain AEQU_0636 PF13522 Glutamine amidotransferase domain AEQU_0638 PF01648 4'-phosphopantetheinyl transferase superfamily AEQU_0639 PF00512 His Kinase A (phospho-acceptor) domain AEQU_0639 PF02743 Cache domain AEQU_0640 PF01256 Carbohydrate kinase AEQU_0641 PF03729 AEQU_0641 AEQU_0642 PF00533 BRCA1 C Terminus (BRCT) domain AEQU_0642 PF01653 NAD-dependent DNA ligase adenylation domain AEQU_0642 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AEQU_0642 PF03120 NAD-dependent DNA ligase OB-fold domain AEQU_0642 PF12826 Helix-hairpin-helix motif AEQU_0643 PF00877 NlpC/P60 family AEQU_0644 PF00877 NlpC/P60 family AEQU_0644 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AEQU_0644 PF03793 PASTA domain AEQU_0645 PF00953 Glycosyl transferase family 4 AEQU_0647 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AEQU_0648 PF01061 AEQU_0648 AEQU_0649 PF00005 ABC transporter AEQU_0651 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AEQU_0652 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AEQU_0653 PF01370 NAD dependent epimerase/dehydratase family AEQU_0654 PF00535 Glycosyl transferase family 2 AEQU_0655 PF00535 Glycosyl transferase family 2 AEQU_0656 PF00535 Glycosyl transferase family 2 AEQU_0657 PF01473 Putative cell wall binding repeat AEQU_0659 PF02096 60Kd inner membrane protein AEQU_0659 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AEQU_0663 PF13365 Trypsin-like peptidase domain AEQU_0664 PF01757 AEQU_0664 AEQU_0666 PF00535 Glycosyl transferase family 2 AEQU_0669 PF00395 S-layer homology domain AEQU_0670 PF01043 SecA preprotein cross-linking domain AEQU_0670 PF07516 SecA Wing and Scaffold domain AEQU_0670 PF07517 SecA DEAD-like domain AEQU_0671 PF00872 AEQU_0671 AEQU_0673 PF04230 AEQU_0673 AEQU_0675 PF00082 Subtilase family AEQU_0675 PF00395 S-layer homology domain AEQU_0676 PF00132 Bacterial transferase hexapeptide (six repeats) AEQU_0677 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AEQU_0677 PF01467 Cytidylyltransferase AEQU_0678 PF00155 Aminotransferase class I and II AEQU_0679 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain AEQU_0679 PF02558 Ketopantoate reductase PanE/ApbA AEQU_0680 PF00535 Glycosyl transferase family 2 AEQU_0680 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AEQU_0681 PF04914 DltD C-terminal region AEQU_0683 PF00501 AMP-binding enzyme AEQU_0683 PF13193 AMP-binding enzyme C-terminal domain AEQU_0684 PF03062 AEQU_0684 AEQU_0685 PF00550 Phosphopantetheine attachment site AEQU_0686 PF16363 AEQU_0686 AEQU_0687 PF00082 Subtilase family AEQU_0687 PF01473 Putative cell wall binding repeat AEQU_0688 PF01757 AEQU_0688 AEQU_0690 PF04991 AEQU_0690 AEQU_0691 PF00534 Glycosyl transferases group 1 AEQU_0691 PF13439 Glycosyltransferase Family 4 AEQU_0692 PF03062 AEQU_0692 AEQU_0693 PF14286 DHHW protein AEQU_0694 PF00535 Glycosyl transferase family 2 AEQU_0695 PF10066 AEQU_0695 AEQU_0696 PF01473 Putative cell wall binding repeat AEQU_0696 PF03734 L,D-transpeptidase catalytic domain AEQU_0697 PF01183 Glycosyl hydrolases family 25 AEQU_0697 PF01473 Putative cell wall binding repeat AEQU_0698 PF00395 S-layer homology domain AEQU_0698 PF01183 Glycosyl hydrolases family 25 AEQU_0698 PF01473 Putative cell wall binding repeat AEQU_0699 PF00892 EamA-like transporter family AEQU_0700 PF01633 Choline/ethanolamine kinase AEQU_0700 PF12804 MobA-like NTP transferase domain AEQU_0700 PF13412 Winged helix-turn-helix DNA-binding AEQU_0701 PF01613 Flavin reductase like domain AEQU_0702 PF03816 Cell envelope-related transcriptional attenuator domain AEQU_0703 PF01627 Hpt domain AEQU_0704 PF01702 Queuine tRNA-ribosyltransferase AEQU_0705 PF02547 Queuosine biosynthesis protein AEQU_0707 PF00890 FAD binding domain AEQU_0709 PF00196 Bacterial regulatory proteins, luxR family AEQU_0710 PF02355 Protein export membrane protein AEQU_0710 PF07549 SecD/SecF GG Motif AEQU_0711 PF06949 AEQU_0711 AEQU_0712 PF00196 Bacterial regulatory proteins, luxR family AEQU_0715 PF04055 Radical SAM superfamily AEQU_0715 PF13186 Iron-sulfur cluster-binding domain AEQU_0715 PF13353 4Fe-4S single cluster domain AEQU_0716 PF01497 Periplasmic binding protein AEQU_0717 PF01032 FecCD transport family AEQU_0718 PF00005 ABC transporter AEQU_0719 PF12822 Protein of unknown function (DUF3816) AEQU_0720 PF00005 ABC transporter AEQU_0721 PF00005 ABC transporter AEQU_0722 PF02361 Cobalt transport protein AEQU_0723 PF01243 Pyridoxamine 5'-phosphate oxidase AEQU_0724 PF01235 AEQU_0724 AEQU_0725 PF01235 AEQU_0725 AEQU_0726 PF03486 HI0933-like protein AEQU_0727 PF13450 NAD(P)-binding Rossmann-like domain AEQU_0728 PF01300 Telomere recombination AEQU_0729 PF12146 Putative lysophospholipase AEQU_0730 PF10117 AEQU_0730 AEQU_0731 PF07728 AAA domain (dynein-related subfamily) AEQU_0732 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AEQU_0732 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AEQU_0734 PF02502 Ribose/Galactose Isomerase AEQU_0735 PF00464 Serine hydroxymethyltransferase AEQU_0736 PF14681 Uracil phosphoribosyltransferase AEQU_0737 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AEQU_0739 PF00119 ATP synthase A chain AEQU_0740 PF00137 ATP synthase subunit C AEQU_0741 PF00430 ATP synthase B/B' CF(0) AEQU_0742 PF00213 ATP synthase delta (OSCP) subunit AEQU_0743 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AEQU_0743 PF00306 ATP synthase alpha/beta chain, C terminal domain AEQU_0743 PF02874 ATP synthase alpha/beta family, beta-barrel domain AEQU_0744 PF00231 ATP synthase AEQU_0745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AEQU_0745 PF02874 ATP synthase alpha/beta family, beta-barrel domain AEQU_0746 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AEQU_0748 PF13470 AEQU_0748 AEQU_0750 PF02661 Fic/DOC family AEQU_0751 PF01336 OB-fold nucleic acid binding domain AEQU_0751 PF02811 PHP domain AEQU_0751 PF07733 Bacterial DNA polymerase III alpha subunit AEQU_0751 PF14579 Helix-hairpin-helix motif AEQU_0752 PF01416 tRNA pseudouridine synthase AEQU_0753 PF00248 Aldo/keto reductase family AEQU_0753 PF13534 4Fe-4S dicluster domain AEQU_0754 PF00209 Sodium:neurotransmitter symporter family AEQU_0755 PF01926 50S ribosome-binding GTPase AEQU_0755 PF06071 Protein of unknown function (DUF933) AEQU_0756 PF02661 Fic/DOC family AEQU_0757 PF07690 Major Facilitator Superfamily AEQU_0758 PF10021 Uncharacterized protein conserved in bacteria (DUF2263) AEQU_0759 PF06508 Queuosine biosynthesis protein QueC AEQU_0760 PF02686 Glu-tRNAGln amidotransferase C subunit AEQU_0761 PF01425 Amidase AEQU_0762 PF02637 GatB domain AEQU_0762 PF02934 GatB/GatE catalytic domain AEQU_0764 PF00501 AMP-binding enzyme AEQU_0764 PF14535 AMP-binding enzyme C-terminal domain AEQU_0765 PF03466 LysR substrate binding domain AEQU_0766 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AEQU_0767 PF14697 4Fe-4S dicluster domain AEQU_0768 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AEQU_0768 PF17147 AEQU_0768 AEQU_0769 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AEQU_0770 PF00072 Response regulator receiver domain AEQU_0770 PF00486 Transcriptional regulatory protein, C terminal AEQU_0771 PF00512 His Kinase A (phospho-acceptor) domain AEQU_0771 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_0771 PF11845 AEQU_0771 AEQU_0772 PF02335 Cytochrome c552 AEQU_0773 PF01909 Nucleotidyltransferase domain AEQU_0774 PF08780 Nucleotidyltransferase substrate binding protein like AEQU_0775 PF07751 AEQU_0775 AEQU_0778 PF00583 Acetyltransferase (GNAT) family AEQU_0779 PF00682 HMGL-like AEQU_0779 PF08502 LeuA allosteric (dimerisation) domain AEQU_0780 PF12725 AEQU_0780 AEQU_0781 PF02274 Amidinotransferase AEQU_0782 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AEQU_0782 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AEQU_0783 PF03606 AEQU_0783 AEQU_0784 PF00750 tRNA synthetases class I (R) AEQU_0784 PF03485 Arginyl tRNA synthetase N terminal domain AEQU_0784 PF05746 DALR anticodon binding domain AEQU_0785 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AEQU_0785 PF01872 RibD C-terminal domain AEQU_0786 PF00677 Lumazine binding domain AEQU_0787 PF00925 GTP cyclohydrolase II AEQU_0787 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AEQU_0788 PF00885 6,7-dimethyl-8-ribityllumazine synthase AEQU_0789 PF13419 Haloacid dehalogenase-like hydrolase AEQU_0790 PF13930 DNA/RNA non-specific endonuclease AEQU_0791 PF00899 ThiF family AEQU_0792 PF01936 NYN domain AEQU_0792 PF12872 OST-HTH/LOTUS domain AEQU_0793 PF00999 Sodium/hydrogen exchanger family AEQU_0794 PF00579 tRNA synthetases class I (W and Y) AEQU_0795 PF00654 Voltage gated chloride channel AEQU_0796 PF00293 NUDIX domain AEQU_0797 PF00005 ABC transporter AEQU_0797 PF12848 ABC transporter AEQU_0797 PF16326 AEQU_0797 AEQU_0798 PF00588 SpoU rRNA Methylase family AEQU_0800 PF00999 Sodium/hydrogen exchanger family AEQU_0801 PF00196 Bacterial regulatory proteins, luxR family AEQU_0802 PF00890 FAD binding domain AEQU_0802 PF04205 FMN-binding domain AEQU_0804 PF02163 Peptidase family M50 AEQU_0805 PF02616 ScpA/B protein AEQU_0806 PF04079 Putative transcriptional regulators (Ypuh-like) AEQU_0807 PF00849 RNA pseudouridylate synthase AEQU_0807 PF01479 S4 domain AEQU_0808 PF02548 Ketopantoate hydroxymethyltransferase AEQU_0809 PF02569 Pantoate-beta-alanine ligase AEQU_0810 PF02261 Aspartate decarboxylase AEQU_0811 PF02558 Ketopantoate reductase PanE/ApbA AEQU_0811 PF08546 Ketopantoate reductase PanE/ApbA C terminal AEQU_0812 PF00072 Response regulator receiver domain AEQU_0812 PF00512 His Kinase A (phospho-acceptor) domain AEQU_0812 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_0813 PF01547 Bacterial extracellular solute-binding protein AEQU_0814 PF02153 Prephenate dehydrogenase AEQU_0815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AEQU_0816 PF02224 Cytidylate kinase AEQU_0817 PF01553 Acyltransferase AEQU_0818 PF02401 LytB protein AEQU_0819 PF04459 AEQU_0819 AEQU_0820 PF01926 50S ribosome-binding GTPase AEQU_0820 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AEQU_0821 PF02660 AEQU_0821 AEQU_0822 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AEQU_0822 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AEQU_0824 PF00072 Response regulator receiver domain AEQU_0824 PF00512 His Kinase A (phospho-acceptor) domain AEQU_0824 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_0825 PF01547 Bacterial extracellular solute-binding protein AEQU_0826 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AEQU_0827 PF00834 Ribulose-phosphate 3 epimerase family AEQU_0828 PF00266 Aminotransferase class-V AEQU_0829 PF02811 PHP domain AEQU_0830 PF01784 NIF3 (NGG1p interacting factor 3) AEQU_0832 PF00830 Ribosomal L28 family AEQU_0833 PF03780 AEQU_0833 AEQU_0834 PF02734 DAK2 domain AEQU_0834 PF13684 Dihydroxyacetone kinase family AEQU_0835 PF00270 DEAD/DEAH box helicase AEQU_0835 PF00271 Helicase conserved C-terminal domain AEQU_0835 PF17191 AEQU_0835 AEQU_0836 PF03602 Conserved hypothetical protein 95 AEQU_0838 PF02620 AEQU_0838 AEQU_0839 PF00654 Voltage gated chloride channel AEQU_0840 PF01783 Ribosomal L32p protein family AEQU_0841 PF02504 Fatty acid synthesis protein AEQU_0842 PF00035 Double-stranded RNA binding motif AEQU_0842 PF14622 Ribonuclease-III-like AEQU_0843 PF02463 RecF/RecN/SMC N terminal domain AEQU_0843 PF06470 SMC proteins Flexible Hinge Domain AEQU_0845 PF00384 Molybdopterin oxidoreductase AEQU_0845 PF01568 Molydopterin dinucleotide binding domain AEQU_0846 PF12800 4Fe-4S binding domain AEQU_0846 PF13247 4Fe-4S dicluster domain AEQU_0847 PF02613 Nitrate reductase delta subunit AEQU_0848 PF07690 Major Facilitator Superfamily AEQU_0850 PF00266 Aminotransferase class-V AEQU_0850 PF00581 Rhodanese-like domain AEQU_0851 PF13847 Methyltransferase domain AEQU_0852 PF01906 Putative heavy-metal-binding AEQU_0853 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AEQU_0853 PF05221 S-adenosyl-L-homocysteine hydrolase AEQU_0854 PF13641 Glycosyltransferase like family 2 AEQU_0855 PF00156 Phosphoribosyl transferase domain AEQU_0857 PF00497 Bacterial extracellular solute-binding proteins, family 3 AEQU_0858 PF01458 Uncharacterized protein family (UPF0051) AEQU_0859 PF00005 ABC transporter AEQU_0860 PF05193 Peptidase M16 inactive domain AEQU_0860 PF08367 Peptidase M16C associated AEQU_0863 PF00707 Translation initiation factor IF-3, C-terminal domain AEQU_0863 PF05198 Translation initiation factor IF-3, N-terminal domain AEQU_0864 PF01632 Ribosomal protein L35 AEQU_0865 PF00453 Ribosomal protein L20 AEQU_0866 PF02579 Dinitrogenase iron-molybdenum cofactor AEQU_0867 PF00270 DEAD/DEAH box helicase AEQU_0867 PF00271 Helicase conserved C-terminal domain AEQU_0868 PF04101 Glycosyltransferase family 28 C-terminal domain AEQU_0868 PF06925 AEQU_0868 AEQU_0869 PF00535 Glycosyl transferase family 2 AEQU_0870 PF04138 AEQU_0870 AEQU_0871 PF00781 Diacylglycerol kinase catalytic domain AEQU_0872 PF01938 TRAM domain AEQU_0872 PF05958 tRNA (Uracil-5-)-methyltransferase AEQU_0873 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AEQU_0874 PF13176 Tetratricopeptide repeat AEQU_0874 PF13181 Tetratricopeptide repeat AEQU_0874 PF13432 Tetratricopeptide repeat AEQU_0875 PF00334 Nucleoside diphosphate kinase AEQU_0876 PF17179 AEQU_0876 AEQU_0877 PF00175 Oxidoreductase NAD-binding domain AEQU_0877 PF00970 Oxidoreductase FAD-binding domain AEQU_0877 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AEQU_0878 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AEQU_0879 PF00374 Nickel-dependent hydrogenase AEQU_0880 PF06723 MreB/Mbl protein AEQU_0881 PF04085 rod shape-determining protein MreC AEQU_0882 PF04093 AEQU_0882 AEQU_0883 PF00905 Penicillin binding protein transpeptidase domain AEQU_0883 PF03717 Penicillin-binding Protein dimerisation domain AEQU_0884 PF01098 AEQU_0884 AEQU_0886 PF04055 Radical SAM superfamily AEQU_0887 PF10105 AEQU_0887 AEQU_0888 PF01230 HIT domain AEQU_0889 PF00291 Pyridoxal-phosphate dependent enzyme AEQU_0890 PF00027 Cyclic nucleotide-binding domain AEQU_0890 PF13545 Crp-like helix-turn-helix domain AEQU_0891 PF03063 Prismane/CO dehydrogenase family AEQU_0892 PF00293 NUDIX domain AEQU_0892 PF00857 Isochorismatase family AEQU_0893 PF01145 SPFH domain / Band 7 family AEQU_0894 PF01245 Ribosomal protein L19 AEQU_0895 PF01351 Ribonuclease HII AEQU_0896 PF02021 Uncharacterised protein family UPF0102 AEQU_0897 PF01078 Magnesium chelatase, subunit ChlI AEQU_0897 PF13335 AEQU_0897 AEQU_0897 PF13541 Subunit ChlI of Mg-chelatase AEQU_0898 PF02481 DNA recombination-mediator protein A AEQU_0899 PF01134 Glucose inhibited division protein A AEQU_0900 PF00589 Phage integrase family AEQU_0900 PF02899 Phage integrase, N-terminal SAM-like domain AEQU_0902 PF07690 Major Facilitator Superfamily AEQU_0905 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AEQU_0905 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AEQU_0906 PF08713 DNA alkylation repair enzyme AEQU_0907 PF00817 impB/mucB/samB family AEQU_0907 PF11799 impB/mucB/samB family C-terminal domain AEQU_0909 PF09903 AEQU_0909 AEQU_0910 PF13338 AEQU_0910 AEQU_0911 PF08843 Nucleotidyl transferase of unknown function (DUF1814) AEQU_0913 PF08797 HIRAN domain AEQU_0916 PF12705 PD-(D/E)XK nuclease superfamily AEQU_0917 PF00580 UvrD/REP helicase N-terminal domain AEQU_0917 PF12705 PD-(D/E)XK nuclease superfamily AEQU_0917 PF13361 UvrD-like helicase C-terminal domain AEQU_0919 PF00890 FAD binding domain AEQU_0920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_0920 PF03466 LysR substrate binding domain AEQU_0921 PF00890 FAD binding domain AEQU_0922 PF02274 Amidinotransferase AEQU_0923 PF00890 FAD binding domain AEQU_0923 PF04205 FMN-binding domain AEQU_0924 PF00196 Bacterial regulatory proteins, luxR family AEQU_0925 PF13417 Glutathione S-transferase, N-terminal domain AEQU_0926 PF00266 Aminotransferase class-V AEQU_0927 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AEQU_0927 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AEQU_0929 PF00682 HMGL-like AEQU_0929 PF08502 LeuA allosteric (dimerisation) domain AEQU_0930 PF07883 Cupin domain AEQU_0930 PF13560 Helix-turn-helix domain AEQU_0931 PF00501 AMP-binding enzyme AEQU_0931 PF13193 AMP-binding enzyme C-terminal domain AEQU_0932 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AEQU_0932 PF02770 Acyl-CoA dehydrogenase, middle domain AEQU_0932 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AEQU_0933 PF00440 Bacterial regulatory proteins, tetR family AEQU_0934 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AEQU_0934 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEQU_0935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AEQU_0935 PF02770 Acyl-CoA dehydrogenase, middle domain AEQU_0935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AEQU_0937 PF01467 Cytidylyltransferase AEQU_0938 PF01012 Electron transfer flavoprotein domain AEQU_0939 PF00766 Electron transfer flavoprotein FAD-binding domain AEQU_0939 PF01012 Electron transfer flavoprotein domain AEQU_0940 PF02665 Nitrate reductase gamma subunit AEQU_0940 PF02754 AEQU_0940 AEQU_0940 PF13183 4Fe-4S dicluster domain AEQU_0942 PF00753 Metallo-beta-lactamase superfamily AEQU_0943 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AEQU_0943 PF02770 Acyl-CoA dehydrogenase, middle domain AEQU_0943 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AEQU_0944 PF00501 AMP-binding enzyme AEQU_0944 PF13193 AMP-binding enzyme C-terminal domain AEQU_0945 PF00501 AMP-binding enzyme AEQU_0945 PF13193 AMP-binding enzyme C-terminal domain AEQU_0946 PF00378 Enoyl-CoA hydratase/isomerase family AEQU_0947 PF03358 NADPH-dependent FMN reductase AEQU_0948 PF00890 FAD binding domain AEQU_0948 PF04205 FMN-binding domain AEQU_0949 PF13560 Helix-turn-helix domain AEQU_0950 PF09820 AEQU_0950 AEQU_0951 PF00384 Molybdopterin oxidoreductase AEQU_0951 PF01568 Molydopterin dinucleotide binding domain AEQU_0952 PF12800 4Fe-4S binding domain AEQU_0952 PF13247 4Fe-4S dicluster domain AEQU_0953 PF03916 AEQU_0953 AEQU_0954 PF02613 Nitrate reductase delta subunit AEQU_0955 PF12802 MarR family AEQU_0956 PF00384 Molybdopterin oxidoreductase AEQU_0956 PF01568 Molydopterin dinucleotide binding domain AEQU_0956 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_0957 PF13247 4Fe-4S dicluster domain AEQU_0958 PF02515 CoA-transferase family III AEQU_0959 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AEQU_0959 PF02770 Acyl-CoA dehydrogenase, middle domain AEQU_0960 PF07690 Major Facilitator Superfamily AEQU_0961 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_0961 PF03466 LysR substrate binding domain AEQU_0962 PF02576 Uncharacterised BCR, YhbC family COG0779 AEQU_0962 PF17384 AEQU_0962 AEQU_0963 PF08529 NusA N-terminal domain AEQU_0963 PF13184 NusA-like KH domain AEQU_0964 PF04296 Protein of unknown function (DUF448) AEQU_0965 PF00009 Elongation factor Tu GTP binding domain AEQU_0965 PF04760 Translation initiation factor IF-2, N-terminal region AEQU_0965 PF11987 Translation-initiation factor 2 AEQU_0966 PF02033 Ribosome-binding factor A AEQU_0967 PF01368 DHH family AEQU_0967 PF02272 DHHA1 domain AEQU_0968 PF01509 TruB family pseudouridylate synthase (N terminal domain) AEQU_0968 PF16198 AEQU_0968 AEQU_0969 PF01687 Riboflavin kinase AEQU_0969 PF06574 FAD synthetase AEQU_0970 PF00884 Sulfatase AEQU_0971 PF01541 GIY-YIG catalytic domain AEQU_0971 PF02151 UvrB/uvrC motif AEQU_0971 PF08459 UvrC Helix-hairpin-helix N-terminal AEQU_0972 PF03668 AEQU_0972 AEQU_0973 PF01933 Uncharacterised protein family UPF0052 AEQU_0974 PF02650 WhiA C-terminal HTH domain AEQU_0974 PF10298 WhiA N-terminal LAGLIDADG-like domain AEQU_0974 PF14527 WhiA LAGLIDADG-like domain AEQU_0975 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AEQU_0975 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AEQU_0976 PF00162 Phosphoglycerate kinase AEQU_0977 PF00121 Triosephosphate isomerase AEQU_0978 PF01676 Metalloenzyme superfamily AEQU_0978 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AEQU_0979 PF03840 Preprotein translocase SecG subunit AEQU_0980 PF01545 Cation efflux family AEQU_0980 PF16916 AEQU_0980 AEQU_0982 PF03741 AEQU_0982 AEQU_0984 PF00589 Phage integrase family AEQU_0987 PF10987 AEQU_0987 AEQU_0988 PF00717 Peptidase S24-like AEQU_0991 PF13520 Amino acid permease AEQU_0992 PF00781 Diacylglycerol kinase catalytic domain AEQU_0993 PF00570 HRDC domain AEQU_0993 PF01612 3'-5' exonuclease AEQU_0994 PF04298 AEQU_0994 AEQU_0995 PF02601 AEQU_0995 AEQU_0995 PF13742 AEQU_0995 AEQU_0996 PF02609 Exonuclease VII small subunit AEQU_0997 PF00871 Acetokinase family AEQU_0998 PF00890 FAD binding domain AEQU_0998 PF04205 FMN-binding domain AEQU_0999 PF00196 Bacterial regulatory proteins, luxR family AEQU_1000 PF01515 Phosphate acetyl/butaryl transferase AEQU_1001 PF03275 UDP-galactopyranose mutase AEQU_1001 PF13450 NAD(P)-binding Rossmann-like domain AEQU_1002 PF00535 Glycosyl transferase family 2 AEQU_1003 PF03309 Type III pantothenate kinase AEQU_1004 PF00817 impB/mucB/samB family AEQU_1004 PF11799 impB/mucB/samB family C-terminal domain AEQU_1005 PF02645 Uncharacterised protein, DegV family COG1307 AEQU_1006 PF00133 tRNA synthetases class I (I, L, M and V) AEQU_1006 PF08264 Anticodon-binding domain of tRNA AEQU_1007 PF01252 AEQU_1007 AEQU_1008 PF00849 RNA pseudouridylate synthase AEQU_1008 PF01479 S4 domain AEQU_1009 PF00762 Ferrochelatase AEQU_1010 PF13463 Winged helix DNA-binding domain AEQU_1011 PF00890 FAD binding domain AEQU_1012 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_1012 PF03466 LysR substrate binding domain AEQU_1013 PF00890 FAD binding domain AEQU_1014 PF00890 FAD binding domain AEQU_1015 PF00196 Bacterial regulatory proteins, luxR family AEQU_1016 PF04055 Radical SAM superfamily AEQU_1017 PF00890 FAD binding domain AEQU_1018 PF00196 Bacterial regulatory proteins, luxR family AEQU_1020 PF05525 AEQU_1020 AEQU_1021 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AEQU_1021 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AEQU_1022 PF00146 NADH dehydrogenase AEQU_1023 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AEQU_1024 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AEQU_1025 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AEQU_1025 PF00374 Nickel-dependent hydrogenase AEQU_1026 PF12838 4Fe-4S dicluster domain AEQU_1027 PF01066 CDP-alcohol phosphatidyltransferase AEQU_1028 PF04294 AEQU_1028 AEQU_1028 PF12229 Putative peptidoglycan binding domain AEQU_1029 PF00501 AMP-binding enzyme AEQU_1029 PF14535 AMP-binding enzyme C-terminal domain AEQU_1031 PF00768 D-alanyl-D-alanine carboxypeptidase AEQU_1032 PF16697 AEQU_1032 AEQU_1033 PF00037 4Fe-4S binding domain AEQU_1033 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AEQU_1033 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AEQU_1034 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AEQU_1036 PF00501 AMP-binding enzyme AEQU_1036 PF14535 AMP-binding enzyme C-terminal domain AEQU_1037 PF00749 tRNA synthetases class I (E and Q), catalytic domain AEQU_1038 PF01040 UbiA prenyltransferase family AEQU_1047 PF05707 Zonular occludens toxin (Zot) AEQU_1048 PF01719 Plasmid replication protein AEQU_1050 PF00692 dUTPase AEQU_1051 PF03477 ATP cone domain AEQU_1052 PF00717 Peptidase S24-like AEQU_1052 PF01726 LexA DNA binding domain AEQU_1053 PF01926 50S ribosome-binding GTPase AEQU_1053 PF13167 AEQU_1053 AEQU_1053 PF16360 AEQU_1053 AEQU_1054 PF01678 Diaminopimelate epimerase AEQU_1055 PF01715 IPP transferase AEQU_1056 PF00919 Uncharacterized protein family UPF0004 AEQU_1056 PF01938 TRAM domain AEQU_1056 PF04055 Radical SAM superfamily AEQU_1057 PF04232 Stage V sporulation protein S (SpoVS) AEQU_1058 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_1059 PF00013 KH domain AEQU_1059 PF01966 HD domain AEQU_1059 PF12072 AEQU_1059 AEQU_1060 PF02631 RecX family AEQU_1061 PF00154 recA bacterial DNA recombination protein AEQU_1062 PF01066 CDP-alcohol phosphatidyltransferase AEQU_1062 PF02464 Competence-damaged protein AEQU_1063 PF00919 Uncharacterized protein family UPF0004 AEQU_1063 PF04055 Radical SAM superfamily AEQU_1064 PF04461 Protein of unknown function (DUF520) AEQU_1065 PF13413 Helix-turn-helix domain AEQU_1066 PF01580 FtsK/SpoIIIE family AEQU_1066 PF09397 Ftsk gamma domain AEQU_1066 PF13491 AEQU_1066 AEQU_1067 PF07521 RNA-metabolising metallo-beta-lactamase AEQU_1067 PF12706 Beta-lactamase superfamily domain AEQU_1068 PF00701 Dihydrodipicolinate synthetase family AEQU_1069 PF01113 Dihydrodipicolinate reductase, N-terminus AEQU_1069 PF05173 Dihydrodipicolinate reductase, C-terminus AEQU_1070 PF00013 KH domain AEQU_1070 PF00575 S1 RNA binding domain AEQU_1070 PF01138 3' exoribonuclease family, domain 1 AEQU_1070 PF03725 3' exoribonuclease family, domain 2 AEQU_1070 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AEQU_1071 PF00312 Ribosomal protein S15 AEQU_1072 PF02565 Recombination protein O C terminal AEQU_1072 PF11967 Recombination protein O N terminal AEQU_1073 PF03793 PASTA domain AEQU_1074 PF01926 50S ribosome-binding GTPase AEQU_1074 PF07650 KH domain AEQU_1075 PF01219 Prokaryotic diacylglycerol kinase AEQU_1076 PF02130 Uncharacterized protein family UPF0054 AEQU_1077 PF02562 PhoH-like protein AEQU_1078 PF00919 Uncharacterized protein family UPF0004 AEQU_1078 PF04055 Radical SAM superfamily AEQU_1079 PF04452 RNA methyltransferase AEQU_1080 PF01628 HrcA protein C terminal domain AEQU_1080 PF08220 DeoR-like helix-turn-helix domain AEQU_1081 PF00226 DnaJ domain AEQU_1081 PF00684 DnaJ central domain AEQU_1081 PF01556 DnaJ C terminal domain AEQU_1082 PF04055 Radical SAM superfamily AEQU_1084 PF01207 Dihydrouridine synthase (Dus) AEQU_1085 PF03358 NADPH-dependent FMN reductase AEQU_1087 PF00009 Elongation factor Tu GTP binding domain AEQU_1087 PF00679 Elongation factor G C-terminus AEQU_1087 PF03144 Elongation factor Tu domain 2 AEQU_1087 PF06421 GTP-binding protein LepA C-terminus AEQU_1088 PF01649 Ribosomal protein S20 AEQU_1089 PF00753 Metallo-beta-lactamase superfamily AEQU_1090 PF06144 DNA polymerase III, delta subunit AEQU_1091 PF00753 Metallo-beta-lactamase superfamily AEQU_1091 PF03772 AEQU_1091 AEQU_1092 PF10531 SLBB domain AEQU_1092 PF12836 Helix-hairpin-helix motif AEQU_1093 PF02568 Thiamine biosynthesis protein (ThiI) AEQU_1093 PF02926 THUMP domain AEQU_1094 PF01192 RNA polymerase Rpb6 AEQU_1095 PF00625 Guanylate kinase AEQU_1097 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AEQU_1098 PF01180 Dihydroorotate dehydrogenase AEQU_1099 PF00970 Oxidoreductase FAD-binding domain AEQU_1099 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AEQU_1100 PF02142 MGS-like domain AEQU_1100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AEQU_1100 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AEQU_1101 PF00117 Glutamine amidotransferase class-I AEQU_1101 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AEQU_1102 PF00005 ABC transporter AEQU_1103 PF01032 FecCD transport family AEQU_1104 PF01032 FecCD transport family AEQU_1105 PF01497 Periplasmic binding protein AEQU_1106 PF01979 Amidohydrolase family AEQU_1107 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AEQU_1107 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AEQU_1108 PF00156 Phosphoribosyl transferase domain AEQU_1109 PF02915 Rubrerythrin AEQU_1110 PF14537 Cytochrome c3 AEQU_1111 PF00501 AMP-binding enzyme AEQU_1111 PF13193 AMP-binding enzyme C-terminal domain AEQU_1112 PF07883 Cupin domain AEQU_1112 PF12844 Helix-turn-helix domain AEQU_1113 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AEQU_1114 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AEQU_1115 PF12838 4Fe-4S dicluster domain AEQU_1116 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AEQU_1116 PF17147 AEQU_1116 AEQU_1117 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AEQU_1118 PF00501 AMP-binding enzyme AEQU_1118 PF13193 AMP-binding enzyme C-terminal domain AEQU_1119 PF07883 Cupin domain AEQU_1119 PF12844 Helix-turn-helix domain AEQU_1120 PF01029 NusB family AEQU_1120 PF01189 NOL1/NOP2/sun family AEQU_1121 PF00551 Formyl transferase AEQU_1121 PF02911 Formyl transferase, C-terminal domain AEQU_1122 PF01327 Polypeptide deformylase AEQU_1123 PF01807 CHC2 zinc finger AEQU_1123 PF08275 DNA primase catalytic core, N-terminal domain AEQU_1123 PF13662 Toprim domain AEQU_1124 PF01966 HD domain AEQU_1124 PF13286 Phosphohydrolase-associated domain AEQU_1125 PF00075 RNase H AEQU_1126 PF00196 Bacterial regulatory proteins, luxR family AEQU_1127 PF02416 mttA/Hcf106 family AEQU_1128 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AEQU_1128 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain AEQU_1129 PF01842 ACT domain AEQU_1129 PF10369 Small subunit of acetolactate synthase AEQU_1130 PF00205 Thiamine pyrophosphate enzyme, central domain AEQU_1130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AEQU_1130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AEQU_1131 PF00920 Dehydratase family AEQU_1132 PF12385 AEQU_1132 AEQU_1133 PF00132 Bacterial transferase hexapeptide (six repeats) AEQU_1134 PF01048 Phosphorylase superfamily AEQU_1135 PF05175 Methyltransferase small domain AEQU_1136 PF00472 RF-1 domain AEQU_1136 PF03462 PCRF domain AEQU_1137 PF01909 Nucleotidyltransferase domain AEQU_1138 PF02613 Nitrate reductase delta subunit AEQU_1139 PF13247 4Fe-4S dicluster domain AEQU_1140 PF00384 Molybdopterin oxidoreductase AEQU_1140 PF01568 Molydopterin dinucleotide binding domain AEQU_1141 PF00196 Bacterial regulatory proteins, luxR family AEQU_1142 PF00999 Sodium/hydrogen exchanger family AEQU_1143 PF00085 Thioredoxin AEQU_1144 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEQU_1145 PF00474 Sodium:solute symporter family AEQU_1146 PF06196 AEQU_1146 AEQU_1147 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AEQU_1147 PF02824 TGS domain AEQU_1147 PF03129 Anticodon binding domain AEQU_1147 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AEQU_1148 PF12773 AEQU_1148 AEQU_1150 PF00133 tRNA synthetases class I (I, L, M and V) AEQU_1150 PF08264 Anticodon-binding domain of tRNA AEQU_1150 PF10458 Valyl tRNA synthetase tRNA binding arm AEQU_1151 PF06689 ClpX C4-type zinc finger AEQU_1151 PF07724 AAA domain (Cdc48 subfamily) AEQU_1151 PF10431 C-terminal, D2-small domain, of ClpB protein AEQU_1152 PF00574 Clp protease AEQU_1153 PF05697 Bacterial trigger factor protein (TF) AEQU_1153 PF05698 Bacterial trigger factor protein (TF) C-terminus AEQU_1156 PF07690 Major Facilitator Superfamily AEQU_1157 PF07969 Amidohydrolase family AEQU_1158 PF08279 HTH domain AEQU_1159 PF07690 Major Facilitator Superfamily AEQU_1160 PF00375 Sodium:dicarboxylate symporter family AEQU_1161 PF01520 N-acetylmuramoyl-L-alanine amidase AEQU_1162 PF05105 AEQU_1162 AEQU_1169 PF14594 AEQU_1169 AEQU_1170 PF05709 Phage tail protein AEQU_1171 PF10145 AEQU_1171 AEQU_1180 PF05065 Phage capsid family AEQU_1181 PF00574 Clp protease AEQU_1182 PF04860 Phage portal protein AEQU_1183 PF03354 AEQU_1183 AEQU_1184 PF05119 AEQU_1184 AEQU_1187 PF14354 AEQU_1187 AEQU_1193 PF01555 DNA methylase AEQU_1196 PF00712 DNA polymerase III beta subunit, N-terminal domain AEQU_1196 PF02767 DNA polymerase III beta subunit, central domain AEQU_1196 PF02768 DNA polymerase III beta subunit, C-terminal domain AEQU_1200 PF07083 AEQU_1200 AEQU_1205 PF01381 Helix-turn-helix AEQU_1206 PF00520 Ion transport protein AEQU_1207 PF00239 Resolvase, N terminal domain AEQU_1207 PF07508 Recombinase AEQU_1208 PF02926 THUMP domain AEQU_1208 PF10672 S-adenosylmethionine-dependent methyltransferase AEQU_1209 PF00140 Sigma-70 factor, region 1 AEQU_1209 PF04539 Sigma-70 region 3 AEQU_1209 PF04542 Sigma-70 region 2 AEQU_1209 PF04545 Sigma-70, region 4 AEQU_1210 PF00072 Response regulator receiver domain AEQU_1210 PF00486 Transcriptional regulatory protein, C terminal AEQU_1211 PF00512 His Kinase A (phospho-acceptor) domain AEQU_1211 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_1211 PF11845 AEQU_1211 AEQU_1212 PF13247 4Fe-4S dicluster domain AEQU_1213 PF00384 Molybdopterin oxidoreductase AEQU_1213 PF01568 Molydopterin dinucleotide binding domain AEQU_1213 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_1213 PF10518 TAT (twin-arginine translocation) pathway signal sequence AEQU_1215 PF00196 Bacterial regulatory proteins, luxR family AEQU_1216 PF00890 FAD binding domain AEQU_1217 PF00270 DEAD/DEAH box helicase AEQU_1217 PF00271 Helicase conserved C-terminal domain AEQU_1218 PF04073 Aminoacyl-tRNA editing domain AEQU_1219 PF07314 AEQU_1219 AEQU_1220 PF14403 AEQU_1220 AEQU_1221 PF00440 Bacterial regulatory proteins, tetR family AEQU_1223 PF04055 Radical SAM superfamily AEQU_1223 PF13186 Iron-sulfur cluster-binding domain AEQU_1223 PF13394 4Fe-4S single cluster domain AEQU_1224 PF00438 S-adenosylmethionine synthetase, N-terminal domain AEQU_1224 PF02772 S-adenosylmethionine synthetase, central domain AEQU_1224 PF02773 S-adenosylmethionine synthetase, C-terminal domain AEQU_1225 PF03061 Thioesterase superfamily AEQU_1227 PF00749 tRNA synthetases class I (E and Q), catalytic domain AEQU_1230 PF00892 EamA-like transporter family AEQU_1231 PF00270 DEAD/DEAH box helicase AEQU_1231 PF00271 Helicase conserved C-terminal domain AEQU_1231 PF02559 CarD-like/TRCF domain AEQU_1231 PF03461 TRCF domain AEQU_1232 PF00633 Helix-hairpin-helix motif AEQU_1232 PF00730 HhH-GPD superfamily base excision DNA repair protein AEQU_1233 PF01750 Hydrogenase maturation protease AEQU_1235 PF12698 ABC-2 family transporter protein AEQU_1236 PF12698 ABC-2 family transporter protein AEQU_1237 PF01292 Prokaryotic cytochrome b561 AEQU_1238 PF00374 Nickel-dependent hydrogenase AEQU_1239 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AEQU_1239 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AEQU_1240 PF00800 Prephenate dehydratase AEQU_1240 PF01842 ACT domain AEQU_1242 PF04480 Protein of unknown function (DUF559) AEQU_1243 PF02659 AEQU_1243 AEQU_1244 PF00730 HhH-GPD superfamily base excision DNA repair protein AEQU_1246 PF12710 haloacid dehalogenase-like hydrolase AEQU_1247 PF00005 ABC transporter AEQU_1247 PF00664 ABC transporter transmembrane region AEQU_1248 PF00005 ABC transporter AEQU_1248 PF00664 ABC transporter transmembrane region AEQU_1249 PF05437 AEQU_1249 AEQU_1250 PF03591 AEQU_1250 AEQU_1253 PF13614 AAA domain AEQU_1254 PF01008 Initiation factor 2 subunit family AEQU_1255 PF00391 PEP-utilising enzyme, mobile domain AEQU_1255 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AEQU_1255 PF02896 PEP-utilising enzyme, TIM barrel domain AEQU_1257 PF03618 AEQU_1257 AEQU_1258 PF02092 AEQU_1258 AEQU_1258 PF05746 DALR anticodon binding domain AEQU_1259 PF02091 Glycyl-tRNA synthetase alpha subunit AEQU_1260 PF10502 Signal peptidase, peptidase S26 AEQU_1261 PF01746 tRNA (Guanine-1)-methyltransferase AEQU_1263 PF13083 KH domain AEQU_1264 PF00886 Ribosomal protein S16 AEQU_1265 PF00005 ABC transporter AEQU_1266 PF00005 ABC transporter AEQU_1267 PF00528 Binding-protein-dependent transport system inner membrane component AEQU_1268 PF00528 Binding-protein-dependent transport system inner membrane component AEQU_1269 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AEQU_1270 PF00448 SRP54-type protein, GTPase domain AEQU_1270 PF02881 SRP54-type protein, helical bundle domain AEQU_1270 PF02978 Signal peptide binding domain AEQU_1271 PF00448 SRP54-type protein, GTPase domain AEQU_1271 PF02881 SRP54-type protein, helical bundle domain AEQU_1272 PF00209 Sodium:neurotransmitter symporter family AEQU_1273 PF02987 AEQU_1273 AEQU_1274 PF12800 4Fe-4S binding domain AEQU_1274 PF13247 4Fe-4S dicluster domain AEQU_1275 PF00384 Molybdopterin oxidoreductase AEQU_1275 PF01568 Molydopterin dinucleotide binding domain AEQU_1275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_1276 PF01145 SPFH domain / Band 7 family AEQU_1277 PF00392 Bacterial regulatory proteins, gntR family AEQU_1278 PF03916 AEQU_1278 AEQU_1279 PF00575 S1 RNA binding domain AEQU_1279 PF00773 RNB domain AEQU_1279 PF08206 Ribonuclease B OB domain AEQU_1280 PF03572 Peptidase family S41 AEQU_1280 PF13180 PDZ domain AEQU_1281 PF02687 AEQU_1281 AEQU_1282 PF00005 ABC transporter AEQU_1283 PF02779 Transketolase, pyrimidine binding domain AEQU_1283 PF02780 Transketolase, C-terminal domain AEQU_1284 PF00456 Transketolase, thiamine diphosphate binding domain AEQU_1285 PF02368 Bacterial Ig-like domain (group 2) AEQU_1285 PF03382 AEQU_1285 AEQU_1287 PF05016 Plasmid stabilisation system protein AEQU_1289 PF00472 RF-1 domain AEQU_1289 PF03462 PCRF domain AEQU_1290 PF01043 SecA preprotein cross-linking domain AEQU_1290 PF02810 SEC-C motif AEQU_1290 PF07516 SecA Wing and Scaffold domain AEQU_1290 PF07517 SecA DEAD-like domain AEQU_1293 PF02322 AEQU_1293 AEQU_1294 PF01654 AEQU_1294 AEQU_1295 PF03704 Bacterial transcriptional activator domain AEQU_1296 PF02410 Oligomerisation domain AEQU_1297 PF01966 HD domain AEQU_1298 PF01467 Cytidylyltransferase AEQU_1299 PF00171 Aldehyde dehydrogenase family AEQU_1300 PF00696 Amino acid kinase family AEQU_1300 PF01472 PUA domain AEQU_1301 PF01018 GTP1/OBG AEQU_1301 PF01926 50S ribosome-binding GTPase AEQU_1301 PF09269 Domain of unknown function (DUF1967) AEQU_1303 PF01016 Ribosomal L27 protein AEQU_1304 PF00829 Ribosomal prokaryotic L21 protein AEQU_1305 PF03606 AEQU_1305 AEQU_1306 PF02274 Amidinotransferase AEQU_1308 PF00196 Bacterial regulatory proteins, luxR family AEQU_1309 PF00476 DNA polymerase family A AEQU_1309 PF01367 5'-3' exonuclease, C-terminal SAM fold AEQU_1309 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AEQU_1310 PF00486 Transcriptional regulatory protein, C terminal AEQU_1311 PF00120 Glutamine synthetase, catalytic domain AEQU_1311 PF03951 Glutamine synthetase, beta-Grasp domain AEQU_1312 PF01197 Ribosomal protein L31 AEQU_1313 PF01880 Desulfoferrodoxin AEQU_1313 PF06397 Desulfoferrodoxin, N-terminal domain AEQU_1314 PF01790 AEQU_1314 AEQU_1317 PF01106 NifU-like domain AEQU_1318 PF03816 Cell envelope-related transcriptional attenuator domain AEQU_1318 PF13399 LytR cell envelope-related transcriptional attenuator AEQU_1319 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AEQU_1320 PF00889 Elongation factor TS AEQU_1321 PF00318 Ribosomal protein S2 AEQU_1324 PF09334 tRNA synthetases class I (M) AEQU_1325 PF01343 Peptidase family S49 AEQU_1326 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AEQU_1326 PF07497 Rho termination factor, RNA-binding domain AEQU_1326 PF07498 Rho termination factor, N-terminal domain AEQU_1327 PF00923 Transaldolase AEQU_1328 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_1328 PF03466 LysR substrate binding domain AEQU_1329 PF00892 EamA-like transporter family AEQU_1330 PF01502 Phosphoribosyl-AMP cyclohydrolase AEQU_1332 PF05973 AEQU_1332 AEQU_1333 PF01381 Helix-turn-helix AEQU_1335 PF00977 Histidine biosynthesis protein AEQU_1336 PF00977 Histidine biosynthesis protein AEQU_1337 PF00475 Imidazoleglycerol-phosphate dehydratase AEQU_1338 PF00117 Glutamine amidotransferase class-I AEQU_1339 PF00155 Aminotransferase class I and II AEQU_1340 PF00815 Histidinol dehydrogenase AEQU_1341 PF01634 ATP phosphoribosyltransferase AEQU_1341 PF13393 Histidyl-tRNA synthetase AEQU_1342 PF01969 Protein of unknown function DUF111 AEQU_1343 PF00731 AIR carboxylase AEQU_1344 PF13411 MerR HTH family regulatory protein AEQU_1345 PF01725 Ham1 family AEQU_1346 PF01177 Asp/Glu/Hydantoin racemase AEQU_1347 PF03734 L,D-transpeptidase catalytic domain AEQU_1347 PF12229 Putative peptidoglycan binding domain AEQU_1348 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AEQU_1350 PF01668 SmpB protein AEQU_1351 PF05343 M42 glutamyl aminopeptidase AEQU_1353 PF00156 Phosphoribosyl transferase domain AEQU_1355 PF13566 AEQU_1355 AEQU_1356 PF02645 Uncharacterised protein, DegV family COG1307 AEQU_1357 PF04055 Radical SAM superfamily AEQU_1358 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AEQU_1359 PF02645 Uncharacterised protein, DegV family COG1307 AEQU_1360 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AEQU_1361 PF04468 AEQU_1361 AEQU_1362 PF13177 DNA polymerase III, delta subunit AEQU_1363 PF02223 Thymidylate kinase AEQU_1364 PF00390 Malic enzyme, N-terminal domain AEQU_1364 PF03949 Malic enzyme, NAD binding domain AEQU_1365 PF05681 AEQU_1365 AEQU_1366 PF05683 Fumarase C-terminus AEQU_1368 PF01131 DNA topoisomerase AEQU_1368 PF01396 AEQU_1368 AEQU_1368 PF01751 Toprim domain AEQU_1372 PF14014 AEQU_1372 AEQU_1373 PF13560 Helix-turn-helix domain AEQU_1374 PF13411 MerR HTH family regulatory protein AEQU_1375 PF00528 Binding-protein-dependent transport system inner membrane component AEQU_1376 PF00528 Binding-protein-dependent transport system inner membrane component AEQU_1377 PF00497 Bacterial extracellular solute-binding proteins, family 3 AEQU_1378 PF00005 ABC transporter AEQU_1379 PF07136 AEQU_1379 AEQU_1380 PF02511 Thymidylate synthase complementing protein AEQU_1381 PF13649 Methyltransferase domain AEQU_1382 PF00313 'Cold-shock' DNA-binding domain AEQU_1384 PF05491 Holliday junction DNA helicase ruvB C-terminus AEQU_1384 PF05496 Holliday junction DNA helicase ruvB N-terminus AEQU_1385 PF01330 RuvA N terminal domain AEQU_1385 PF14520 Helix-hairpin-helix domain AEQU_1386 PF02075 Crossover junction endodeoxyribonuclease RuvC AEQU_1387 PF13561 Enoyl-(Acyl carrier protein) reductase AEQU_1388 PF01709 Transcriptional regulator AEQU_1389 PF00196 Bacterial regulatory proteins, luxR family AEQU_1390 PF00890 FAD binding domain AEQU_1391 PF01967 MoaC family AEQU_1392 PF04055 Radical SAM superfamily AEQU_1392 PF06463 Molybdenum Cofactor Synthesis C AEQU_1392 PF13353 4Fe-4S single cluster domain AEQU_1393 PF00196 Bacterial regulatory proteins, luxR family AEQU_1394 PF01794 AEQU_1394 AEQU_1395 PF02613 Nitrate reductase delta subunit AEQU_1396 PF13247 4Fe-4S dicluster domain AEQU_1397 PF00384 Molybdopterin oxidoreductase AEQU_1397 PF01568 Molydopterin dinucleotide binding domain AEQU_1397 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_1399 PF00005 ABC transporter AEQU_1400 PF00528 Binding-protein-dependent transport system inner membrane component AEQU_1401 PF13531 Bacterial extracellular solute-binding protein AEQU_1402 PF03069 Acetamidase/Formamidase family AEQU_1403 PF01743 Poly A polymerase head domain AEQU_1403 PF01966 HD domain AEQU_1403 PF12627 Probable RNA and SrmB- binding site of polymerase A AEQU_1403 PF13735 tRNA nucleotidyltransferase domain 2 putative AEQU_1404 PF01925 AEQU_1404 AEQU_1405 PF00440 Bacterial regulatory proteins, tetR family AEQU_1405 PF02909 Tetracyclin repressor, C-terminal all-alpha domain AEQU_1406 PF14537 Cytochrome c3 AEQU_1407 PF00890 FAD binding domain AEQU_1408 PF08543 Phosphomethylpyrimidine kinase AEQU_1409 PF00857 Isochorismatase family AEQU_1410 PF02581 Thiamine monophosphate synthase/TENI AEQU_1411 PF01964 ThiC family AEQU_1412 PF04263 Thiamin pyrophosphokinase, catalytic domain AEQU_1412 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain AEQU_1413 PF05103 DivIVA protein AEQU_1414 PF02325 AEQU_1414 AEQU_1415 PF04472 Protein of unknown function (DUF552) AEQU_1416 PF01168 Alanine racemase, N-terminal domain AEQU_1417 PF02578 Multi-copper polyphenol oxidoreductase laccase AEQU_1418 PF00091 Tubulin/FtsZ family, GTPase domain AEQU_1418 PF12327 FtsZ family, C-terminal domain AEQU_1419 PF03799 Cell division protein FtsQ AEQU_1419 PF08478 POTRA domain, FtsQ-type AEQU_1420 PF01565 FAD binding domain AEQU_1420 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AEQU_1421 PF01225 Mur ligase family, catalytic domain AEQU_1421 PF02875 Mur ligase family, glutamate ligase domain AEQU_1421 PF08245 Mur ligase middle domain AEQU_1422 PF03033 Glycosyltransferase family 28 N-terminal domain AEQU_1422 PF04101 Glycosyltransferase family 28 C-terminal domain AEQU_1423 PF01098 AEQU_1423 AEQU_1424 PF02875 Mur ligase family, glutamate ligase domain AEQU_1424 PF08245 Mur ligase middle domain AEQU_1425 PF00953 Glycosyl transferase family 4 AEQU_1425 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AEQU_1426 PF01225 Mur ligase family, catalytic domain AEQU_1426 PF02875 Mur ligase family, glutamate ligase domain AEQU_1426 PF08245 Mur ligase middle domain AEQU_1427 PF01225 Mur ligase family, catalytic domain AEQU_1427 PF02875 Mur ligase family, glutamate ligase domain AEQU_1427 PF08245 Mur ligase middle domain AEQU_1428 PF00905 Penicillin binding protein transpeptidase domain AEQU_1428 PF03717 Penicillin-binding Protein dimerisation domain AEQU_1429 PF04999 AEQU_1429 AEQU_1430 PF01795 MraW methylase family AEQU_1431 PF02381 MraZ protein AEQU_1432 PF00589 Phage integrase family AEQU_1432 PF02899 Phage integrase, N-terminal SAM-like domain AEQU_1433 PF00710 Asparaginase AEQU_1434 PF03458 AEQU_1434 AEQU_1435 PF08903 Domain of unknown function (DUF1846) AEQU_1436 PF00196 Bacterial regulatory proteins, luxR family AEQU_1437 PF00890 FAD binding domain AEQU_1438 PF06897 AEQU_1438 AEQU_1439 PF00117 Glutamine amidotransferase class-I AEQU_1439 PF06418 CTP synthase N-terminus AEQU_1440 PF00557 Metallopeptidase family M24 AEQU_1441 PF01513 ATP-NAD kinase AEQU_1442 PF03023 AEQU_1442 AEQU_1443 PF00687 Ribosomal protein L1p/L10e family AEQU_1444 PF00298 Ribosomal protein L11, RNA binding domain AEQU_1444 PF03946 Ribosomal protein L11, N-terminal domain AEQU_1445 PF02357 Transcription termination factor nusG AEQU_1446 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AEQU_1447 PF00471 Ribosomal protein L33 AEQU_1448 PF00009 Elongation factor Tu GTP binding domain AEQU_1448 PF03143 Elongation factor Tu C-terminal domain AEQU_1448 PF03144 Elongation factor Tu domain 2 AEQU_1449 PF00877 NlpC/P60 family AEQU_1450 PF00753 Metallo-beta-lactamase superfamily AEQU_1451 PF00474 Sodium:solute symporter family AEQU_1452 PF12897 Alanine-glyoxylate amino-transferase AEQU_1453 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AEQU_1454 PF01177 Asp/Glu/Hydantoin racemase AEQU_1455 PF00733 Asparagine synthase AEQU_1455 PF13537 Glutamine amidotransferase domain AEQU_1456 PF01794 AEQU_1456 AEQU_1457 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_1457 PF03466 LysR substrate binding domain AEQU_1458 PF00890 FAD binding domain AEQU_1459 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AEQU_1459 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AEQU_1459 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AEQU_1459 PF10371 Domain of unknown function AEQU_1459 PF12838 4Fe-4S dicluster domain AEQU_1459 PF17147 AEQU_1459 AEQU_1460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AEQU_1462 PF00406 Adenylate kinase AEQU_1463 PF00344 SecY translocase AEQU_1464 PF00828 Ribosomal protein L18e/L15 AEQU_1465 PF00327 Ribosomal protein L30p/L7e AEQU_1466 PF00333 Ribosomal protein S5, N-terminal domain AEQU_1466 PF03719 Ribosomal protein S5, C-terminal domain AEQU_1467 PF00861 Ribosomal L18p/L5e family AEQU_1468 PF00347 Ribosomal protein L6 AEQU_1469 PF00410 Ribosomal protein S8 AEQU_1470 PF00253 Ribosomal protein S14p/S29e AEQU_1471 PF00281 Ribosomal protein L5 AEQU_1471 PF00673 ribosomal L5P family C-terminus AEQU_1472 PF00467 KOW motif AEQU_1472 PF17136 AEQU_1472 AEQU_1473 PF00238 Ribosomal protein L14p/L23e AEQU_1474 PF00366 Ribosomal protein S17 AEQU_1475 PF00831 Ribosomal L29 protein AEQU_1476 PF00252 Ribosomal protein L16p/L10e AEQU_1477 PF00189 Ribosomal protein S3, C-terminal domain AEQU_1477 PF07650 KH domain AEQU_1478 PF00237 Ribosomal protein L22p/L17e AEQU_1479 PF00203 Ribosomal protein S19 AEQU_1480 PF00181 Ribosomal Proteins L2, RNA binding domain AEQU_1480 PF03947 Ribosomal Proteins L2, C-terminal domain AEQU_1481 PF13085 2Fe-2S iron-sulfur cluster binding domain AEQU_1481 PF13187 4Fe-4S dicluster domain AEQU_1482 PF00890 FAD binding domain AEQU_1482 PF02910 Fumarate reductase flavoprotein C-term AEQU_1483 PF01047 MarR family AEQU_1483 PF12802 MarR family AEQU_1484 PF04055 Radical SAM superfamily AEQU_1484 PF08497 AEQU_1484 AEQU_1484 PF11842 AEQU_1484 AEQU_1485 PF05697 Bacterial trigger factor protein (TF) AEQU_1485 PF05698 Bacterial trigger factor protein (TF) C-terminus AEQU_1486 PF02687 AEQU_1486 AEQU_1487 PF00005 ABC transporter AEQU_1488 PF00196 Bacterial regulatory proteins, luxR family AEQU_1489 PF00174 Oxidoreductase molybdopterin binding domain AEQU_1491 PF00174 Oxidoreductase molybdopterin binding domain AEQU_1492 PF00196 Bacterial regulatory proteins, luxR family AEQU_1493 PF00174 Oxidoreductase molybdopterin binding domain AEQU_1495 PF00276 Ribosomal protein L23 AEQU_1496 PF00573 Ribosomal protein L4/L1 family AEQU_1497 PF00297 Ribosomal protein L3 AEQU_1498 PF00338 Ribosomal protein S10p/S20e AEQU_1499 PF00009 Elongation factor Tu GTP binding domain AEQU_1499 PF00679 Elongation factor G C-terminus AEQU_1499 PF03144 Elongation factor Tu domain 2 AEQU_1499 PF03764 Elongation factor G, domain IV AEQU_1499 PF14492 Elongation Factor G, domain II AEQU_1500 PF00177 Ribosomal protein S7p/S5e AEQU_1501 PF00164 Ribosomal protein S12/S23 AEQU_1502 PF00196 Bacterial regulatory proteins, luxR family AEQU_1503 PF14537 Cytochrome c3 AEQU_1504 PF00890 FAD binding domain AEQU_1505 PF01136 AEQU_1505 AEQU_1507 PF01546 Peptidase family M20/M25/M40 AEQU_1507 PF07687 Peptidase dimerisation domain AEQU_1508 PF01368 DHH family AEQU_1508 PF02833 DHHA2 domain AEQU_1509 PF01842 ACT domain AEQU_1509 PF03313 AEQU_1509 AEQU_1509 PF03315 Serine dehydratase beta chain AEQU_1510 PF00580 UvrD/REP helicase N-terminal domain AEQU_1510 PF13361 UvrD-like helicase C-terminal domain AEQU_1511 PF00497 Bacterial extracellular solute-binding proteins, family 3 AEQU_1513 PF03733 AEQU_1513 AEQU_1514 PF01026 TatD related DNase AEQU_1515 PF01728 FtsJ-like methyltransferase AEQU_1517 PF01118 Semialdehyde dehydrogenase, NAD binding domain AEQU_1517 PF02774 Semialdehyde dehydrogenase, dimerisation domain AEQU_1518 PF00696 Amino acid kinase family AEQU_1518 PF01842 ACT domain AEQU_1518 PF13840 ACT domain AEQU_1519 PF00882 Zinc dependent phospholipase C AEQU_1520 PF03458 AEQU_1520 AEQU_1521 PF01865 Protein of unknown function DUF47 AEQU_1522 PF01384 AEQU_1522 AEQU_1523 PF00753 Metallo-beta-lactamase superfamily AEQU_1524 PF02824 TGS domain AEQU_1524 PF04607 Region found in RelA / SpoT proteins AEQU_1524 PF13291 ACT domain AEQU_1524 PF13328 HD domain AEQU_1525 PF00270 DEAD/DEAH box helicase AEQU_1525 PF00271 Helicase conserved C-terminal domain AEQU_1525 PF01368 DHH family AEQU_1525 PF02272 DHHA1 domain AEQU_1526 PF14489 QueF-like protein AEQU_1527 PF06508 Queuosine biosynthesis protein QueC AEQU_1528 PF04055 Radical SAM superfamily AEQU_1528 PF13394 4Fe-4S single cluster domain AEQU_1529 PF01242 6-pyruvoyl tetrahydropterin synthase AEQU_1531 PF01205 Uncharacterized protein family UPF0029 AEQU_1531 PF09186 Domain of unknown function (DUF1949) AEQU_1532 PF00005 ABC transporter AEQU_1532 PF12848 ABC transporter AEQU_1533 PF07690 Major Facilitator Superfamily AEQU_1534 PF01195 Peptidyl-tRNA hydrolase AEQU_1535 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AEQU_1535 PF14572 Phosphoribosyl synthetase-associated domain AEQU_1536 PF00132 Bacterial transferase hexapeptide (six repeats) AEQU_1536 PF12804 MobA-like NTP transferase domain AEQU_1538 PF00122 E1-E2 ATPase AEQU_1538 PF00403 Heavy-metal-associated domain AEQU_1538 PF00702 haloacid dehalogenase-like hydrolase AEQU_1539 PF02583 Metal-sensitive transcriptional repressor AEQU_1540 PF00550 Phosphopantetheine attachment site AEQU_1541 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AEQU_1541 PF16321 AEQU_1541 AEQU_1543 PF06965 Na+/H+ antiporter 1 AEQU_1544 PF08245 Mur ligase middle domain AEQU_1545 PF01544 CorA-like Mg2+ transporter protein AEQU_1546 PF03167 Uracil DNA glycosylase superfamily AEQU_1547 PF00842 Alanine racemase, C-terminal domain AEQU_1547 PF01168 Alanine racemase, N-terminal domain AEQU_1548 PF00994 Probable molybdopterin binding domain AEQU_1549 PF00994 Probable molybdopterin binding domain AEQU_1549 PF03453 MoeA N-terminal region (domain I and II) AEQU_1549 PF03454 MoeA C-terminal region (domain IV) AEQU_1550 PF00005 ABC transporter AEQU_1550 PF00664 ABC transporter transmembrane region AEQU_1552 PF00890 FAD binding domain AEQU_1553 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_1553 PF03466 LysR substrate binding domain AEQU_1554 PF00113 Enolase, C-terminal TIM barrel domain AEQU_1554 PF03952 Enolase, N-terminal domain AEQU_1555 PF06100 Streptococcal 67 kDa myosin-cross-reactive antigen like family AEQU_1556 PF00892 EamA-like transporter family AEQU_1557 PF02361 Cobalt transport protein AEQU_1560 PF01196 Ribosomal protein L17 AEQU_1561 PF01000 RNA polymerase Rpb3/RpoA insert domain AEQU_1561 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AEQU_1561 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AEQU_1562 PF00163 Ribosomal protein S4/S9 N-terminal domain AEQU_1562 PF01479 S4 domain AEQU_1563 PF00411 Ribosomal protein S11 AEQU_1564 PF00416 Ribosomal protein S13/S18 AEQU_1565 PF00444 Ribosomal protein L36 AEQU_1566 PF01176 Translation initiation factor 1A / IF-1 AEQU_1567 PF04262 Glutamate-cysteine ligase AEQU_1569 PF00196 Bacterial regulatory proteins, luxR family AEQU_1570 PF14537 Cytochrome c3 AEQU_1571 PF00890 FAD binding domain AEQU_1572 PF07690 Major Facilitator Superfamily AEQU_1573 PF00582 Universal stress protein family AEQU_1575 PF02554 AEQU_1575 AEQU_1575 PF13722 AEQU_1575 AEQU_1577 PF11449 AEQU_1577 AEQU_1578 PF00860 Permease family AEQU_1579 PF00156 Phosphoribosyl transferase domain AEQU_1580 PF00118 TCP-1/cpn60 chaperonin family AEQU_1581 PF00166 Chaperonin 10 Kd subunit AEQU_1582 PF00072 Response regulator receiver domain AEQU_1582 PF00196 Bacterial regulatory proteins, luxR family AEQU_1583 PF07730 Histidine kinase AEQU_1584 PF02540 NAD synthase AEQU_1585 PF01155 Hydrogenase expression/synthesis hypA family AEQU_1586 PF00902 Sec-independent protein translocase protein (TatC) AEQU_1587 PF02416 mttA/Hcf106 family AEQU_1589 PF01979 Amidohydrolase family AEQU_1590 PF01209 ubiE/COQ5 methyltransferase family AEQU_1592 PF02613 Nitrate reductase delta subunit AEQU_1593 PF04073 Aminoacyl-tRNA editing domain AEQU_1594 PF14358 AEQU_1594 AEQU_1596 PF03916 AEQU_1596 AEQU_1597 PF00037 4Fe-4S binding domain AEQU_1597 PF13247 4Fe-4S dicluster domain AEQU_1599 PF00384 Molybdopterin oxidoreductase AEQU_1599 PF01568 Molydopterin dinucleotide binding domain AEQU_1600 PF01145 SPFH domain / Band 7 family AEQU_1601 PF00392 Bacterial regulatory proteins, gntR family AEQU_1602 PF03916 AEQU_1602 AEQU_1603 PF00072 Response regulator receiver domain AEQU_1603 PF00486 Transcriptional regulatory protein, C terminal AEQU_1604 PF00512 His Kinase A (phospho-acceptor) domain AEQU_1604 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_1604 PF02702 Osmosensitive K+ channel His kinase sensor domain AEQU_1604 PF13493 Domain of unknown function (DUF4118) AEQU_1605 PF02669 AEQU_1605 AEQU_1606 PF00122 E1-E2 ATPase AEQU_1606 PF00702 haloacid dehalogenase-like hydrolase AEQU_1607 PF03814 AEQU_1607 AEQU_1608 PF02579 Dinitrogenase iron-molybdenum cofactor AEQU_1609 PF00583 Acetyltransferase (GNAT) family AEQU_1609 PF00814 Glycoprotease family AEQU_1610 PF02367 Uncharacterised P-loop hydrolase UPF0079 AEQU_1611 PF01226 Formate/nitrite transporter AEQU_1612 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AEQU_1612 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AEQU_1613 PF04961 Formiminotransferase-cyclodeaminase AEQU_1614 PF01268 Formate--tetrahydrofolate ligase AEQU_1615 PF03309 Type III pantothenate kinase AEQU_1616 PF00072 Response regulator receiver domain AEQU_1616 PF00486 Transcriptional regulatory protein, C terminal AEQU_1617 PF02632 BioY family AEQU_1618 PF01554 MatE AEQU_1619 PF12800 4Fe-4S binding domain AEQU_1619 PF13247 4Fe-4S dicluster domain AEQU_1620 PF00384 Molybdopterin oxidoreductase AEQU_1620 PF01568 Molydopterin dinucleotide binding domain AEQU_1620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_1620 PF10518 TAT (twin-arginine translocation) pathway signal sequence AEQU_1621 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_1621 PF03466 LysR substrate binding domain AEQU_1622 PF02613 Nitrate reductase delta subunit AEQU_1623 PF00890 FAD binding domain AEQU_1624 PF14537 Cytochrome c3 AEQU_1626 PF02237 Biotin protein ligase C terminal domain AEQU_1626 PF03099 Biotin/lipoate A/B protein ligase family AEQU_1627 PF00809 Pterin binding enzyme AEQU_1627 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AEQU_1628 PF00004 ATPase family associated with various cellular activities (AAA) AEQU_1628 PF01434 Peptidase family M41 AEQU_1629 PF00156 Phosphoribosyl transferase domain AEQU_1630 PF02545 Maf-like protein AEQU_1631 PF01171 PP-loop family AEQU_1632 PF05958 tRNA (Uracil-5-)-methyltransferase AEQU_1633 PF04020 AEQU_1633 AEQU_1634 PF00005 ABC transporter AEQU_1634 PF02687 AEQU_1634 AEQU_1635 PF00210 Ferritin-like domain AEQU_1636 PF02677 AEQU_1636 AEQU_1637 PF03006 AEQU_1637 AEQU_1638 PF01261 Xylose isomerase-like TIM barrel AEQU_1639 PF03547 AEQU_1639 AEQU_1640 PF00248 Aldo/keto reductase family AEQU_1640 PF13187 4Fe-4S dicluster domain AEQU_1641 PF00085 Thioredoxin AEQU_1642 PF01871 AMMECR1 AEQU_1642 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AEQU_1643 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AEQU_1644 PF00288 GHMP kinases N terminal domain AEQU_1644 PF10509 Galactokinase galactose-binding signature AEQU_1645 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AEQU_1645 PF02837 Glycosyl hydrolases family 2, sugar binding domain AEQU_1646 PF00440 Bacterial regulatory proteins, tetR family AEQU_1648 PF00196 Bacterial regulatory proteins, luxR family AEQU_1649 PF00890 FAD binding domain AEQU_1650 PF01965 DJ-1/PfpI family AEQU_1651 PF13470 AEQU_1651 AEQU_1654 PF02613 Nitrate reductase delta subunit AEQU_1655 PF12800 4Fe-4S binding domain AEQU_1655 PF13247 4Fe-4S dicluster domain AEQU_1656 PF00384 Molybdopterin oxidoreductase AEQU_1656 PF01568 Molydopterin dinucleotide binding domain AEQU_1657 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_1657 PF03466 LysR substrate binding domain AEQU_1658 PF00248 Aldo/keto reductase family AEQU_1658 PF13534 4Fe-4S dicluster domain AEQU_1659 PF01979 Amidohydrolase family AEQU_1659 PF13382 Adenine deaminase C-terminal domain AEQU_1660 PF02580 D-Tyr-tRNA(Tyr) deacylase AEQU_1661 PF07722 Peptidase C26 AEQU_1662 PF03749 Sugar fermentation stimulation protein AEQU_1663 PF03553 AEQU_1663 AEQU_1664 PF00270 DEAD/DEAH box helicase AEQU_1664 PF00271 Helicase conserved C-terminal domain AEQU_1664 PF12029 AEQU_1664 AEQU_1665 PF00890 FAD binding domain AEQU_1666 PF00196 Bacterial regulatory proteins, luxR family AEQU_1667 PF13173 AAA domain AEQU_1667 PF13635 AEQU_1667 AEQU_1669 PF02811 PHP domain AEQU_1670 PF00005 ABC transporter AEQU_1671 PF01979 Amidohydrolase family AEQU_1672 PF00005 ABC transporter AEQU_1673 PF06007 AEQU_1673 AEQU_1674 PF05861 AEQU_1674 AEQU_1675 PF05845 Bacterial phosphonate metabolism protein (PhnH) AEQU_1676 PF06754 AEQU_1676 AEQU_1677 PF00528 Binding-protein-dependent transport system inner membrane component AEQU_1678 PF00528 Binding-protein-dependent transport system inner membrane component AEQU_1679 PF00005 ABC transporter AEQU_1680 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein AEQU_1682 PF01235 AEQU_1682 AEQU_1683 PF00176 SNF2 family N-terminal domain AEQU_1683 PF00271 Helicase conserved C-terminal domain AEQU_1683 PF08455 AEQU_1683 AEQU_1685 PF00873 AcrB/AcrD/AcrF family AEQU_1686 PF01047 MarR family AEQU_1688 PF00005 ABC transporter AEQU_1688 PF00664 ABC transporter transmembrane region AEQU_1689 PF13245 Part of AAA domain AEQU_1689 PF13538 UvrD-like helicase C-terminal domain AEQU_1690 PF01327 Polypeptide deformylase AEQU_1692 PF12706 Beta-lactamase superfamily domain AEQU_1693 PF01042 Endoribonuclease L-PSP AEQU_1694 PF00072 Response regulator receiver domain AEQU_1694 PF00512 His Kinase A (phospho-acceptor) domain AEQU_1694 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_1696 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AEQU_1699 PF02492 CobW/HypB/UreG, nucleotide-binding domain AEQU_1700 PF01569 PAP2 superfamily AEQU_1702 PF03167 Uracil DNA glycosylase superfamily AEQU_1702 PF03853 YjeF-related protein N-terminus AEQU_1703 PF07853 AEQU_1703 AEQU_1704 PF00392 Bacterial regulatory proteins, gntR family AEQU_1705 PF02517 CAAX protease self-immunity AEQU_1706 PF02537 AEQU_1706 AEQU_1707 PF03473 MOSC domain AEQU_1708 PF02627 Carboxymuconolactone decarboxylase family AEQU_1708 PF07883 Cupin domain AEQU_1709 PF03600 Citrate transporter AEQU_1710 PF01381 Helix-turn-helix AEQU_1711 PF07804 HipA-like C-terminal domain AEQU_1711 PF13657 HipA N-terminal domain AEQU_1713 PF13561 Enoyl-(Acyl carrier protein) reductase AEQU_1714 PF00450 Serine carboxypeptidase AEQU_1715 PF00890 FAD binding domain AEQU_1715 PF04205 FMN-binding domain AEQU_1716 PF00581 Rhodanese-like domain AEQU_1716 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AEQU_1716 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEQU_1717 PF02535 AEQU_1717 AEQU_1718 PF00037 4Fe-4S binding domain AEQU_1718 PF12837 4Fe-4S binding domain AEQU_1719 PF01966 HD domain AEQU_1719 PF13286 Phosphohydrolase-associated domain AEQU_1720 PF06541 AEQU_1720 AEQU_1721 PF06874 AEQU_1721 AEQU_1722 PF13520 Amino acid permease AEQU_1723 PF00156 Phosphoribosyl transferase domain AEQU_1724 PF00581 Rhodanese-like domain AEQU_1726 PF00155 Aminotransferase class I and II AEQU_1727 PF00696 Amino acid kinase family AEQU_1729 PF06445 GyrI-like small molecule binding domain AEQU_1730 PF13673 Acetyltransferase (GNAT) domain AEQU_1731 PF01381 Helix-turn-helix AEQU_1733 PF00916 AEQU_1733 AEQU_1733 PF01740 STAS domain AEQU_1734 PF00890 FAD binding domain AEQU_1735 PF00196 Bacterial regulatory proteins, luxR family AEQU_1737 PF02254 TrkA-N domain AEQU_1738 PF02254 TrkA-N domain AEQU_1739 PF02386 Cation transport protein AEQU_1740 PF13493 Domain of unknown function (DUF4118) AEQU_1742 PF04304 AEQU_1742 AEQU_1743 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AEQU_1744 PF00916 AEQU_1744 AEQU_1744 PF01740 STAS domain AEQU_1745 PF13561 Enoyl-(Acyl carrier protein) reductase AEQU_1746 PF04055 Radical SAM superfamily AEQU_1748 PF04326 Divergent AAA domain AEQU_1748 PF13749 ATP-dependent DNA helicase recG C-terminal AEQU_1756 PF01863 Protein of unknown function DUF45 AEQU_1757 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AEQU_1757 PF04851 Type III restriction enzyme, res subunit AEQU_1758 PF01420 Type I restriction modification DNA specificity domain AEQU_1759 PF02384 N-6 DNA Methylase AEQU_1759 PF12161 HsdM N-terminal domain AEQU_1760 PF12728 Helix-turn-helix domain AEQU_1762 PF00872 AEQU_1762 AEQU_1763 PF07693 AEQU_1763 AEQU_1765 PF00440 Bacterial regulatory proteins, tetR family AEQU_1767 PF01625 Peptide methionine sulfoxide reductase AEQU_1768 PF02661 Fic/DOC family AEQU_1769 PF00117 Glutamine amidotransferase class-I AEQU_1769 PF00958 GMP synthase C terminal domain AEQU_1769 PF02540 NAD synthase AEQU_1770 PF13350 Tyrosine phosphatase family AEQU_1771 PF00581 Rhodanese-like domain AEQU_1772 PF01022 Bacterial regulatory protein, arsR family AEQU_1773 PF00403 Heavy-metal-associated domain AEQU_1774 PF00122 E1-E2 ATPase AEQU_1774 PF00702 haloacid dehalogenase-like hydrolase AEQU_1776 PF01734 Patatin-like phospholipase AEQU_1777 PF00542 Ribosomal protein L7/L12 C-terminal domain AEQU_1777 PF16320 AEQU_1777 AEQU_1778 PF00466 Ribosomal protein L10 AEQU_1779 PF00196 Bacterial regulatory proteins, luxR family AEQU_1780 PF00890 FAD binding domain AEQU_1782 PF01850 PIN domain AEQU_1784 PF03129 Anticodon binding domain AEQU_1784 PF13393 Histidyl-tRNA synthetase AEQU_1785 PF00180 Isocitrate/isopropylmalate dehydrogenase AEQU_1786 PF00694 Aconitase C-terminal domain AEQU_1787 PF00330 Aconitase family (aconitate hydratase) AEQU_1788 PF01471 Putative peptidoglycan binding domain AEQU_1789 PF00348 Polyprenyl synthetase AEQU_1790 PF05016 Plasmid stabilisation system protein AEQU_1793 PF02613 Nitrate reductase delta subunit AEQU_1794 PF13247 4Fe-4S dicluster domain AEQU_1795 PF00384 Molybdopterin oxidoreductase AEQU_1795 PF01568 Molydopterin dinucleotide binding domain AEQU_1795 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_1795 PF10518 TAT (twin-arginine translocation) pathway signal sequence AEQU_1796 PF13173 AAA domain AEQU_1796 PF13635 AEQU_1796 AEQU_1797 PF00072 Response regulator receiver domain AEQU_1797 PF00486 Transcriptional regulatory protein, C terminal AEQU_1798 PF00512 His Kinase A (phospho-acceptor) domain AEQU_1798 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_1798 PF11845 AEQU_1798 AEQU_1799 PF04203 Sortase family AEQU_1800 PF02541 Ppx/GppA phosphatase family AEQU_1801 PF04977 Septum formation initiator AEQU_1802 PF01325 Iron dependent repressor, N-terminal DNA binding domain AEQU_1802 PF02742 Iron dependent repressor, metal binding and dimerisation domain AEQU_1804 PF02421 Ferrous iron transport protein B AEQU_1804 PF07664 AEQU_1804 AEQU_1804 PF07670 Nucleoside recognition AEQU_1805 PF04023 FeoA domain AEQU_1806 PF04023 FeoA domain AEQU_1807 PF00291 Pyridoxal-phosphate dependent enzyme AEQU_1807 PF14821 Threonine synthase N terminus AEQU_1808 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_1813 PF07811 AEQU_1813 AEQU_1814 PF04021 AEQU_1814 AEQU_1816 PF00482 Type II secretion system (T2SS), protein F AEQU_1817 PF00482 Type II secretion system (T2SS), protein F AEQU_1818 PF00437 Type II/IV secretion system protein AEQU_1819 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AEQU_1820 PF08666 SAF domain AEQU_1820 PF16976 AEQU_1820 AEQU_1821 PF12698 ABC-2 family transporter protein AEQU_1822 PF12698 ABC-2 family transporter protein AEQU_1823 PF00005 ABC transporter AEQU_1823 PF13732 AEQU_1823 AEQU_1824 PF07730 Histidine kinase AEQU_1825 PF00072 Response regulator receiver domain AEQU_1825 PF00196 Bacterial regulatory proteins, luxR family AEQU_1826 PF12833 Helix-turn-helix domain AEQU_1827 PF00892 EamA-like transporter family AEQU_1828 PF00805 Pentapeptide repeats (8 copies) AEQU_1828 PF13599 Pentapeptide repeats (9 copies) AEQU_1829 PF00892 EamA-like transporter family AEQU_1830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_1830 PF03466 LysR substrate binding domain AEQU_1831 PF02661 Fic/DOC family AEQU_1834 PF13247 4Fe-4S dicluster domain AEQU_1835 PF00384 Molybdopterin oxidoreductase AEQU_1835 PF01568 Molydopterin dinucleotide binding domain AEQU_1835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_1836 PF00196 Bacterial regulatory proteins, luxR family AEQU_1837 PF00196 Bacterial regulatory proteins, luxR family AEQU_1838 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AEQU_1838 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEQU_1840 PF02613 Nitrate reductase delta subunit AEQU_1841 PF12800 4Fe-4S binding domain AEQU_1841 PF12838 4Fe-4S dicluster domain AEQU_1842 PF00037 4Fe-4S binding domain AEQU_1842 PF12801 AEQU_1842 AEQU_1843 PF13245 Part of AAA domain AEQU_1845 PF13247 4Fe-4S dicluster domain AEQU_1846 PF00384 Molybdopterin oxidoreductase AEQU_1846 PF01568 Molydopterin dinucleotide binding domain AEQU_1848 PF03466 LysR substrate binding domain AEQU_1849 PF00890 FAD binding domain AEQU_1849 PF10518 TAT (twin-arginine translocation) pathway signal sequence AEQU_1850 PF00037 4Fe-4S binding domain AEQU_1850 PF12800 4Fe-4S binding domain AEQU_1850 PF12838 4Fe-4S dicluster domain AEQU_1851 PF00005 ABC transporter AEQU_1852 PF00392 Bacterial regulatory proteins, gntR family AEQU_1853 PF00005 ABC transporter AEQU_1854 PF13346 AEQU_1854 AEQU_1855 PF12802 MarR family AEQU_1856 PF01554 MatE AEQU_1857 PF02687 AEQU_1857 AEQU_1858 PF00005 ABC transporter AEQU_1859 PF00512 His Kinase A (phospho-acceptor) domain AEQU_1859 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_1860 PF00072 Response regulator receiver domain AEQU_1860 PF00486 Transcriptional regulatory protein, C terminal AEQU_1861 PF02441 Flavoprotein AEQU_1861 PF04127 DNA / pantothenate metabolism flavoprotein AEQU_1862 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AEQU_1862 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AEQU_1863 PF00440 Bacterial regulatory proteins, tetR family AEQU_1864 PF07929 Plasmid pRiA4b ORF-3-like protein AEQU_1866 PF02698 DUF218 domain AEQU_1867 PF00072 Response regulator receiver domain AEQU_1867 PF00512 His Kinase A (phospho-acceptor) domain AEQU_1867 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_1867 PF08447 PAS fold AEQU_1867 PF08448 PAS fold AEQU_1868 PF00133 tRNA synthetases class I (I, L, M and V) AEQU_1868 PF08264 Anticodon-binding domain of tRNA AEQU_1868 PF13603 Leucyl-tRNA synthetase, Domain 2 AEQU_1870 PF01926 50S ribosome-binding GTPase AEQU_1871 PF03595 Voltage-dependent anion channel AEQU_1872 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_1872 PF03466 LysR substrate binding domain AEQU_1873 PF00478 IMP dehydrogenase / GMP reductase domain AEQU_1873 PF00571 CBS domain AEQU_1876 PF12697 Alpha/beta hydrolase family AEQU_1877 PF02915 Rubrerythrin AEQU_1878 PF02127 Aminopeptidase I zinc metalloprotease (M18) AEQU_1879 PF04371 Porphyromonas-type peptidyl-arginine deiminase AEQU_1880 PF13520 Amino acid permease AEQU_1881 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AEQU_1881 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AEQU_1882 PF00196 Bacterial regulatory proteins, luxR family AEQU_1884 PF01371 Trp repressor protein AEQU_1885 PF01063 Aminotransferase class IV AEQU_1886 PF07690 Major Facilitator Superfamily AEQU_1887 PF14262 Domain of unknown function (DUF4353) AEQU_1888 PF16316 AEQU_1888 AEQU_1889 PF09359 VTC domain AEQU_1890 PF00072 Response regulator receiver domain AEQU_1890 PF00486 Transcriptional regulatory protein, C terminal AEQU_1891 PF00512 His Kinase A (phospho-acceptor) domain AEQU_1891 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_1892 PF14537 Cytochrome c3 AEQU_1893 PF00890 FAD binding domain AEQU_1893 PF10518 TAT (twin-arginine translocation) pathway signal sequence AEQU_1894 PF00196 Bacterial regulatory proteins, luxR family AEQU_1895 PF08681 Protein of unknown function (DUF1778) AEQU_1896 PF00037 4Fe-4S binding domain AEQU_1896 PF12838 4Fe-4S dicluster domain AEQU_1897 PF00037 4Fe-4S binding domain AEQU_1897 PF12801 AEQU_1897 AEQU_1898 PF12838 4Fe-4S dicluster domain AEQU_1898 PF13187 4Fe-4S dicluster domain AEQU_1899 PF04976 AEQU_1899 AEQU_1900 PF13247 4Fe-4S dicluster domain AEQU_1901 PF00384 Molybdopterin oxidoreductase AEQU_1901 PF01568 Molydopterin dinucleotide binding domain AEQU_1901 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_1904 PF02613 Nitrate reductase delta subunit AEQU_1907 PF00196 Bacterial regulatory proteins, luxR family AEQU_1908 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_1909 PF00890 FAD binding domain AEQU_1910 PF08220 DeoR-like helix-turn-helix domain AEQU_1910 PF13749 ATP-dependent DNA helicase recG C-terminal AEQU_1911 PF04326 Divergent AAA domain AEQU_1913 PF00512 His Kinase A (phospho-acceptor) domain AEQU_1913 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_1915 PF00005 ABC transporter AEQU_1916 PF00072 Response regulator receiver domain AEQU_1916 PF00486 Transcriptional regulatory protein, C terminal AEQU_1917 PF13181 Tetratricopeptide repeat AEQU_1918 PF00196 Bacterial regulatory proteins, luxR family AEQU_1919 PF00890 FAD binding domain AEQU_1920 PF00120 Glutamine synthetase, catalytic domain AEQU_1920 PF12437 Glutamine synthetase type III N terminal AEQU_1921 PF00890 FAD binding domain AEQU_1922 PF03466 LysR substrate binding domain AEQU_1925 PF00083 Sugar (and other) transporter AEQU_1926 PF00596 Class II Aldolase and Adducin N-terminal domain AEQU_1927 PF06134 L-rhamnose isomerase (RhaA) AEQU_1928 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AEQU_1928 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AEQU_1930 PF00174 Oxidoreductase molybdopterin binding domain AEQU_1931 PF00174 Oxidoreductase molybdopterin binding domain AEQU_1933 PF00380 Ribosomal protein S9/S16 AEQU_1934 PF00572 Ribosomal protein L13 AEQU_1935 PF01850 PIN domain AEQU_1936 PF02535 AEQU_1936 AEQU_1941 PF08534 Redoxin AEQU_1943 PF13443 Cro/C1-type HTH DNA-binding domain AEQU_1944 PF00310 Glutamine amidotransferases class-II AEQU_1945 PF01645 Conserved region in glutamate synthase AEQU_1946 PF01493 GXGXG motif AEQU_1947 PF00890 FAD binding domain AEQU_1948 PF00196 Bacterial regulatory proteins, luxR family AEQU_1950 PF04204 Homoserine O-succinyltransferase AEQU_1951 PF01053 Cys/Met metabolism PLP-dependent enzyme AEQU_1952 PF12728 Helix-turn-helix domain AEQU_1953 PF00196 Bacterial regulatory proteins, luxR family AEQU_1954 PF00890 FAD binding domain AEQU_1955 PF01053 Cys/Met metabolism PLP-dependent enzyme AEQU_1955 PF06541 AEQU_1955 AEQU_1956 PF04976 AEQU_1956 AEQU_1957 PF13247 4Fe-4S dicluster domain AEQU_1958 PF00384 Molybdopterin oxidoreductase AEQU_1958 PF01568 Molydopterin dinucleotide binding domain AEQU_1958 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_1958 PF10518 TAT (twin-arginine translocation) pathway signal sequence AEQU_1959 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_1959 PF03466 LysR substrate binding domain AEQU_1960 PF06541 AEQU_1960 AEQU_1963 PF00196 Bacterial regulatory proteins, luxR family AEQU_1964 PF13310 AEQU_1964 AEQU_1968 PF05708 Orthopoxvirus protein of unknown function (DUF830) AEQU_1969 PF04542 Sigma-70 region 2 AEQU_1969 PF08281 Sigma-70, region 4 AEQU_1972 PF01381 Helix-turn-helix AEQU_1973 PF12784 AEQU_1973 AEQU_1974 PF13419 Haloacid dehalogenase-like hydrolase AEQU_1975 PF00742 Homoserine dehydrogenase AEQU_1975 PF01842 ACT domain AEQU_1975 PF03447 Homoserine dehydrogenase, NAD binding domain AEQU_1977 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AEQU_1977 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AEQU_1978 PF00881 Nitroreductase family AEQU_1980 PF11187 Protein of unknown function (DUF2974) AEQU_1981 PF00209 Sodium:neurotransmitter symporter family AEQU_1982 PF00583 Acetyltransferase (GNAT) family AEQU_1983 PF01791 DeoC/LacD family aldolase AEQU_1984 PF09335 AEQU_1984 AEQU_1985 PF05239 PRC-barrel domain AEQU_1986 PF12732 AEQU_1986 AEQU_1987 PF01820 D-ala D-ala ligase N-terminus AEQU_1987 PF07478 D-ala D-ala ligase C-terminus AEQU_1988 PF00155 Aminotransferase class I and II AEQU_1991 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AEQU_1991 PF02403 Seryl-tRNA synthetase N-terminal domain AEQU_1993 PF00069 Protein kinase domain AEQU_1994 PF01261 Xylose isomerase-like TIM barrel AEQU_1997 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_1997 PF06580 AEQU_1997 AEQU_1998 PF01925 AEQU_1998 AEQU_1999 PF13641 Glycosyltransferase like family 2 AEQU_2000 PF03193 Protein of unknown function, DUF258 AEQU_2002 PF02386 Cation transport protein AEQU_2003 PF01565 FAD binding domain AEQU_2003 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AEQU_2004 PF02769 AIR synthase related protein, C-terminal domain AEQU_2004 PF13507 CobB/CobQ-like glutamine amidotransferase domain AEQU_2006 PF01259 SAICAR synthetase AEQU_2007 PF00512 His Kinase A (phospho-acceptor) domain AEQU_2007 PF00672 HAMP domain AEQU_2007 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_2008 PF00072 Response regulator receiver domain AEQU_2008 PF00486 Transcriptional regulatory protein, C terminal AEQU_2010 PF00933 Glycosyl hydrolase family 3 N terminal domain AEQU_2011 PF02683 AEQU_2011 AEQU_2012 PF00578 AhpC/TSA family AEQU_2013 PF00890 FAD binding domain AEQU_2014 PF00196 Bacterial regulatory proteins, luxR family AEQU_2016 PF00206 Lyase AEQU_2016 PF10397 Adenylosuccinate lyase C-terminus AEQU_2018 PF00288 GHMP kinases N terminal domain AEQU_2019 PF14437 AEQU_2019 AEQU_2020 PF00285 Citrate synthase AEQU_2021 PF00571 CBS domain AEQU_2021 PF03448 MgtE intracellular N domain AEQU_2021 PF05239 PRC-barrel domain AEQU_2022 PF01566 AEQU_2022 AEQU_2023 PF02082 Transcriptional regulator AEQU_2024 PF03553 AEQU_2024 AEQU_2025 PF00474 Sodium:solute symporter family AEQU_2027 PF12697 Alpha/beta hydrolase family AEQU_2028 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AEQU_2029 PF00425 chorismate binding enzyme AEQU_2030 PF13740 ACT domain AEQU_2031 PF01227 GTP cyclohydrolase I AEQU_2032 PF01741 Large-conductance mechanosensitive channel, MscL AEQU_2033 PF07690 Major Facilitator Superfamily AEQU_2034 PF00027 Cyclic nucleotide-binding domain AEQU_2034 PF13545 Crp-like helix-turn-helix domain AEQU_2035 PF12800 4Fe-4S binding domain AEQU_2035 PF13247 4Fe-4S dicluster domain AEQU_2036 PF00384 Molybdopterin oxidoreductase AEQU_2036 PF01568 Molydopterin dinucleotide binding domain AEQU_2037 PF02590 Predicted SPOUT methyltransferase AEQU_2038 PF03372 Endonuclease/Exonuclease/phosphatase family AEQU_2040 PF03816 Cell envelope-related transcriptional attenuator domain AEQU_2040 PF13399 LytR cell envelope-related transcriptional attenuator AEQU_2041 PF07685 CobB/CobQ-like glutamine amidotransferase domain AEQU_2041 PF08245 Mur ligase middle domain AEQU_2041 PF08353 AEQU_2041 AEQU_2043 PF14358 AEQU_2043 AEQU_2045 PF03916 AEQU_2045 AEQU_2046 PF13247 4Fe-4S dicluster domain AEQU_2047 PF00384 Molybdopterin oxidoreductase AEQU_2047 PF01568 Molydopterin dinucleotide binding domain AEQU_2047 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_2048 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_2048 PF03466 LysR substrate binding domain AEQU_2049 PF00890 FAD binding domain AEQU_2050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_2051 PF02661 Fic/DOC family AEQU_2051 PF13412 Winged helix-turn-helix DNA-binding AEQU_2052 PF01554 MatE AEQU_2053 PF02525 Flavodoxin-like fold AEQU_2054 PF04343 AEQU_2054 AEQU_2055 PF00860 Permease family AEQU_2056 PF00155 Aminotransferase class I and II AEQU_2057 PF13520 Amino acid permease AEQU_2058 PF00196 Bacterial regulatory proteins, luxR family AEQU_2059 PF04892 AEQU_2059 AEQU_2059 PF06271 AEQU_2059 AEQU_2060 PF03641 Possible lysine decarboxylase AEQU_2061 PF00990 GGDEF domain AEQU_2061 PF08447 PAS fold AEQU_2062 PF10009 AEQU_2062 AEQU_2063 PF00085 Thioredoxin AEQU_2065 PF05977 Transmembrane secretion effector AEQU_2066 PF00999 Sodium/hydrogen exchanger family AEQU_2067 PF00958 GMP synthase C terminal domain AEQU_2067 PF02540 NAD synthase AEQU_2070 PF12697 Alpha/beta hydrolase family AEQU_2071 PF00753 Metallo-beta-lactamase superfamily AEQU_2072 PF01047 MarR family AEQU_2073 PF01381 Helix-turn-helix AEQU_2075 PF00583 Acetyltransferase (GNAT) family AEQU_2075 PF07859 alpha/beta hydrolase fold AEQU_2078 PF01381 Helix-turn-helix AEQU_2078 PF12674 AEQU_2078 AEQU_2079 PF06445 GyrI-like small molecule binding domain AEQU_2079 PF12833 Helix-turn-helix domain AEQU_2080 PF13673 Acetyltransferase (GNAT) domain AEQU_2081 PF07690 Major Facilitator Superfamily AEQU_2082 PF13419 Haloacid dehalogenase-like hydrolase AEQU_2083 PF14511 Type II restriction endonuclease EcoO109I AEQU_2084 PF00145 C-5 cytosine-specific DNA methylase AEQU_2084 PF12728 Helix-turn-helix domain AEQU_2085 PF04960 Glutaminase AEQU_2086 PF02146 Sir2 family AEQU_2088 PF04471 Restriction endonuclease AEQU_2088 PF14338 AEQU_2088 AEQU_2089 PF07804 HipA-like C-terminal domain AEQU_2090 PF02645 Uncharacterised protein, DegV family COG1307 AEQU_2091 PF13563 2'-5' RNA ligase superfamily AEQU_2092 PF12682 Flavodoxin AEQU_2093 PF00440 Bacterial regulatory proteins, tetR family AEQU_2095 PF07739 TipAS antibiotic-recognition domain AEQU_2095 PF13411 MerR HTH family regulatory protein AEQU_2096 PF02586 Uncharacterised ACR, COG2135 AEQU_2097 PF00462 Glutaredoxin AEQU_2097 PF03960 ArsC family AEQU_2099 PF00174 Oxidoreductase molybdopterin binding domain AEQU_2100 PF00196 Bacterial regulatory proteins, luxR family AEQU_2101 PF02661 Fic/DOC family AEQU_2103 PF00890 FAD binding domain AEQU_2105 PF01212 Beta-eliminating lyase AEQU_2106 PF04073 Aminoacyl-tRNA editing domain AEQU_2107 PF00301 Rubredoxin AEQU_2109 PF13520 Amino acid permease AEQU_2110 PF13520 Amino acid permease AEQU_2111 PF03051 Peptidase C1-like family AEQU_2112 PF04916 Phospholipase B AEQU_2113 PF07690 Major Facilitator Superfamily AEQU_2115 PF00890 FAD binding domain AEQU_2116 PF00196 Bacterial regulatory proteins, luxR family AEQU_2117 PF00890 FAD binding domain AEQU_2117 PF04205 FMN-binding domain AEQU_2118 PF00890 FAD binding domain AEQU_2120 PF04016 Domain of unknown function (DUF364) AEQU_2120 PF13938 Domain of unknown function (DUF4213) AEQU_2121 PF01032 FecCD transport family AEQU_2122 PF00005 ABC transporter AEQU_2123 PF01497 Periplasmic binding protein AEQU_2124 PF02335 Cytochrome c552 AEQU_2125 PF00072 Response regulator receiver domain AEQU_2125 PF00486 Transcriptional regulatory protein, C terminal AEQU_2126 PF00512 His Kinase A (phospho-acceptor) domain AEQU_2126 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_2126 PF11845 AEQU_2126 AEQU_2127 PF01613 Flavin reductase like domain AEQU_2128 PF01243 Pyridoxamine 5'-phosphate oxidase AEQU_2129 PF01638 HxlR-like helix-turn-helix AEQU_2131 PF05015 Plasmid maintenance system killer protein AEQU_2132 PF01381 Helix-turn-helix AEQU_2133 PF08543 Phosphomethylpyrimidine kinase AEQU_2134 PF04245 AEQU_2134 AEQU_2135 PF01183 Glycosyl hydrolases family 25 AEQU_2136 PF05872 AEQU_2136 AEQU_2137 PF03649 AEQU_2137 AEQU_2138 PF00005 ABC transporter AEQU_2139 PF09918 AEQU_2139 AEQU_2140 PF04326 Divergent AAA domain AEQU_2142 PF12668 AEQU_2142 AEQU_2144 PF13151 AEQU_2144 AEQU_2145 PF01396 AEQU_2145 AEQU_2147 PF00892 EamA-like transporter family AEQU_2148 PF13537 Glutamine amidotransferase domain AEQU_2149 PF00501 AMP-binding enzyme AEQU_2149 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AEQU_2149 PF13193 AMP-binding enzyme C-terminal domain AEQU_2149 PF13378 Enolase C-terminal domain-like AEQU_2150 PF00378 Enoyl-CoA hydratase/isomerase family AEQU_2151 PF00437 Type II/IV secretion system protein AEQU_2154 PF16152 AEQU_2154 AEQU_2156 PF00482 Type II secretion system (T2SS), protein F AEQU_2157 PF01841 Transglutaminase-like superfamily AEQU_2158 PF00072 Response regulator receiver domain AEQU_2158 PF00512 His Kinase A (phospho-acceptor) domain AEQU_2158 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_2158 PF02743 Cache domain AEQU_2159 PF01627 Hpt domain AEQU_2160 PF00072 Response regulator receiver domain AEQU_2160 PF00990 GGDEF domain AEQU_2160 PF01966 HD domain AEQU_2161 PF00501 AMP-binding enzyme AEQU_2161 PF14535 AMP-binding enzyme C-terminal domain AEQU_2163 PF00072 Response regulator receiver domain AEQU_2163 PF00486 Transcriptional regulatory protein, C terminal AEQU_2164 PF00512 His Kinase A (phospho-acceptor) domain AEQU_2164 PF00672 HAMP domain AEQU_2164 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_2164 PF11845 AEQU_2164 AEQU_2165 PF12800 4Fe-4S binding domain AEQU_2165 PF13247 4Fe-4S dicluster domain AEQU_2166 PF01568 Molydopterin dinucleotide binding domain AEQU_2167 PF00384 Molybdopterin oxidoreductase AEQU_2168 PF13173 AAA domain AEQU_2168 PF13635 AEQU_2168 AEQU_2169 PF05016 Plasmid stabilisation system protein AEQU_2170 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AEQU_2171 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AEQU_2172 PF00037 4Fe-4S binding domain AEQU_2172 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AEQU_2172 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AEQU_2173 PF00731 AIR carboxylase AEQU_2179 PF00037 4Fe-4S binding domain AEQU_2180 PF12802 MarR family AEQU_2181 PF00497 Bacterial extracellular solute-binding proteins, family 3 AEQU_2182 PF00528 Binding-protein-dependent transport system inner membrane component AEQU_2183 PF00005 ABC transporter AEQU_2184 PF04012 AEQU_2184 AEQU_2187 PF00582 Universal stress protein family AEQU_2188 PF03109 AEQU_2188 AEQU_2189 PF00498 FHA domain AEQU_2189 PF12401 Protein of unknown function (DUF2662) AEQU_2190 PF00498 FHA domain AEQU_2191 PF00481 Protein phosphatase 2C AEQU_2192 PF00905 Penicillin binding protein transpeptidase domain AEQU_2192 PF01098 AEQU_2192 AEQU_2193 PF00069 Protein kinase domain AEQU_2193 PF03793 PASTA domain AEQU_2194 PF00924 Mechanosensitive ion channel AEQU_2195 PF04055 Radical SAM superfamily AEQU_2195 PF13353 4Fe-4S single cluster domain AEQU_2196 PF00512 His Kinase A (phospho-acceptor) domain AEQU_2196 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_2197 PF00072 Response regulator receiver domain AEQU_2197 PF00486 Transcriptional regulatory protein, C terminal AEQU_2198 PF02690 AEQU_2198 AEQU_2199 PF00528 Binding-protein-dependent transport system inner membrane component AEQU_2200 PF00005 ABC transporter AEQU_2201 PF00528 Binding-protein-dependent transport system inner membrane component AEQU_2202 PF12849 PBP superfamily domain AEQU_2203 PF01794 AEQU_2203 AEQU_2204 PF02613 Nitrate reductase delta subunit AEQU_2205 PF12800 4Fe-4S binding domain AEQU_2205 PF13247 4Fe-4S dicluster domain AEQU_2206 PF00384 Molybdopterin oxidoreductase AEQU_2206 PF01568 Molydopterin dinucleotide binding domain AEQU_2207 PF00384 Molybdopterin oxidoreductase AEQU_2207 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AEQU_2207 PF10518 TAT (twin-arginine translocation) pathway signal sequence AEQU_2208 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AEQU_2208 PF03466 LysR substrate binding domain AEQU_2209 PF13173 AAA domain AEQU_2209 PF13635 AEQU_2209 AEQU_2210 PF02661 Fic/DOC family AEQU_2210 PF13784 Fic/DOC family N-terminal AEQU_2212 PF03477 ATP cone domain AEQU_2212 PF13597 Anaerobic ribonucleoside-triphosphate reductase AEQU_2213 PF07155 ECF-type riboflavin transporter, S component AEQU_2214 PF00005 ABC transporter AEQU_2219 PF12051 AEQU_2219 AEQU_2219 PF12698 ABC-2 family transporter protein AEQU_2220 PF12698 ABC-2 family transporter protein AEQU_2221 PF01926 50S ribosome-binding GTPase AEQU_2222 PF04055 Radical SAM superfamily AEQU_2222 PF06968 Biotin and Thiamin Synthesis associated domain AEQU_2223 PF04055 Radical SAM superfamily AEQU_2224 PF02256 Iron hydrogenase small subunit AEQU_2224 PF02906 Iron only hydrogenase large subunit, C-terminal domain AEQU_2224 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AEQU_2224 PF13510 2Fe-2S iron-sulfur cluster binding domain AEQU_2225 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEQU_2225 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AEQU_2225 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AEQU_2227 PF03486 HI0933-like protein AEQU_2228 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AEQU_2228 PF07992 Pyridine nucleotide-disulphide oxidoreductase AEQU_2230 PF13561 Enoyl-(Acyl carrier protein) reductase AEQU_2231 PF00890 FAD binding domain AEQU_2232 PF00766 Electron transfer flavoprotein FAD-binding domain AEQU_2232 PF01012 Electron transfer flavoprotein domain AEQU_2233 PF01012 Electron transfer flavoprotein domain AEQU_2234 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AEQU_2235 PF00072 Response regulator receiver domain AEQU_2235 PF00196 Bacterial regulatory proteins, luxR family AEQU_2238 PF02661 Fic/DOC family AEQU_2240 PF12802 MarR family AEQU_2241 PF00890 FAD binding domain AEQU_2242 PF00890 FAD binding domain AEQU_2242 PF10518 TAT (twin-arginine translocation) pathway signal sequence AEQU_2243 PF00196 Bacterial regulatory proteins, luxR family AEQU_2244 PF13173 AAA domain AEQU_2244 PF13635 AEQU_2244 AEQU_2245 PF00465 Iron-containing alcohol dehydrogenase AEQU_2246 PF01850 PIN domain AEQU_2248 PF01522 Polysaccharide deacetylase AEQU_2248 PF16403 AEQU_2248 AEQU_2249 PF00132 Bacterial transferase hexapeptide (six repeats) AEQU_2250 PF00571 CBS domain AEQU_2250 PF07690 Major Facilitator Superfamily AEQU_2251 PF00571 CBS domain AEQU_2251 PF01595 AEQU_2251 AEQU_2251 PF03471 Transporter associated domain AEQU_2252 PF04909 Amidohydrolase AEQU_2253 PF13616 PPIC-type PPIASE domain AEQU_2253 PF13624 SurA N-terminal domain AEQU_2254 PF00009 Elongation factor Tu GTP binding domain AEQU_2254 PF00679 Elongation factor G C-terminus AEQU_2254 PF03144 Elongation factor Tu domain 2 AEQU_2255 PF00226 DnaJ domain AEQU_2256 PF02517 CAAX protease self-immunity AEQU_2257 PF05857 AEQU_2257 AEQU_2259 PF13306 Leucine rich repeats (6 copies) AEQU_2259 PF13519 von Willebrand factor type A domain AEQU_2260 PF00872 AEQU_2260 AEQU_2261 PF12892 T surface-antigen of pili AEQU_2262 PF06458 MucBP domain AEQU_2263 PF00717 Peptidase S24-like AEQU_2264 PF06458 MucBP domain AEQU_2269 PF13641 Glycosyltransferase like family 2 AEQU_2273 PF08757 AEQU_2273 AEQU_2274 PF16316 AEQU_2274 AEQU_2275 PF09359 VTC domain AEQU_2276 PF02577 Bifunctional nuclease AEQU_2277 PF00521 DNA gyrase/topoisomerase IV, subunit A AEQU_2277 PF03989 DNA gyrase C-terminal domain, beta-propeller AEQU_2278 PF00204 DNA gyrase B AEQU_2278 PF00986 DNA gyrase B subunit, carboxyl terminus AEQU_2278 PF01751 Toprim domain AEQU_2278 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AEQU_2279 PF02463 RecF/RecN/SMC N terminal domain AEQU_2280 PF00712 DNA polymerase III beta subunit, N-terminal domain AEQU_2280 PF02767 DNA polymerase III beta subunit, central domain AEQU_2280 PF02768 DNA polymerase III beta subunit, C-terminal domain AEQU_2281 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase