MIM_c00010	SM00382	ATPases associated with a variety of cellular activities
MIM_c00010	SM00760	Bacterial dnaA protein helix-turn-helix domain
MIM_c00020	SM00480	DNA polymerase III beta subunit
MIM_c00030	SM00387	Histidine kinase-like ATPases
MIM_c00030	SM00433	TopoisomeraseII
MIM_c00050	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c00060	SM00869	Autotransporter beta-domain
MIM_c00090	SM00564	beta-propeller repeat
MIM_c00160	SM00822	MIM_c00160
MIM_c00250	SM00382	ATPases associated with a variety of cellular activities
MIM_c00360	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c00420	SM00382	ATPases associated with a variety of cellular activities
MIM_c00420	SM00930	MIM_c00420
MIM_c00440	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
MIM_c00540	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MIM_c00550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c00550	SM00895	MIM_c00550
MIM_c00590	SM00382	ATPases associated with a variety of cellular activities
MIM_c00640	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MIM_c00640	SM00850	LytTr DNA-binding domain
MIM_c00650	SM00421	helix_turn_helix, Lux Regulon
MIM_c00650	SM00448	cheY-homologous receiver domain
MIM_c00660	SM00387	Histidine kinase-like ATPases
MIM_c00730	SM00382	ATPases associated with a variety of cellular activities
MIM_c00840	SM00028	Tetratricopeptide repeats
MIM_c00960	SM00829	Enoylreductase
MIM_c00970	SM00382	ATPases associated with a variety of cellular activities
MIM_c00980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c00980	SM00895	MIM_c00980
MIM_c01090	SM00419	helix_turn_helix, cAMP Regulatory protein
MIM_c01090	SM00420	helix_turn_helix, Deoxyribose operon repressor
MIM_c01090	SM01134	MIM_c01090
MIM_c01170	SM00382	ATPases associated with a variety of cellular activities
MIM_c01180	SM00382	ATPases associated with a variety of cellular activities
MIM_c01200	SM00822	MIM_c01200
MIM_c01210	SM00849	Metallo-beta-lactamase superfamily
MIM_c01290	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c01290	SM00895	MIM_c01290
MIM_c01440	SM00248	ankyrin repeats
MIM_c01470	SM00849	Metallo-beta-lactamase superfamily
MIM_c01510	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c01530	SM00382	ATPases associated with a variety of cellular activities
MIM_c01560	SM00382	ATPases associated with a variety of cellular activities
MIM_c01660	SM00986	Uracil DNA glycosylase superfamily
MIM_c01660	SM00987	UreE urease accessory protein, C-terminal domain 
MIM_c01710	SM00354	helix_turn _helix lactose operon repressor
MIM_c01790	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c01830	SM00382	ATPases associated with a variety of cellular activities
MIM_c02010	SM00382	ATPases associated with a variety of cellular activities
MIM_c02020	SM00382	ATPases associated with a variety of cellular activities
MIM_c02160	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c02180	SM01150	MIM_c02180
MIM_c02220	SM00382	ATPases associated with a variety of cellular activities
MIM_c02240	SM00822	MIM_c02240
MIM_c02270	SM00382	ATPases associated with a variety of cellular activities
MIM_c02300	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MIM_c02340	SM00564	beta-propeller repeat
MIM_c02390	SM00422	helix_turn_helix, mercury resistance
MIM_c02450	SM00564	beta-propeller repeat
MIM_c02470	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c02560	SM01329	MIM_c02560
MIM_c02610	SM00382	ATPases associated with a variety of cellular activities
MIM_c02650	SM00382	ATPases associated with a variety of cellular activities
MIM_c02730	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c02810	SM00382	ATPases associated with a variety of cellular activities
MIM_c02840	SM00382	ATPases associated with a variety of cellular activities
MIM_c02900	SM00450	Rhodanese Homology Domain
MIM_c02970	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
MIM_c02970	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
MIM_c03000	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c03040	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
MIM_c03120	SM00382	ATPases associated with a variety of cellular activities
MIM_c03130	SM00382	ATPases associated with a variety of cellular activities
MIM_c03200	SM00729	Elongator protein 3, MiaB family, Radical SAM
MIM_c03210	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
MIM_c03210	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
MIM_c03210	SM00493	MIM_c03210
MIM_c03270	SM00878	Biotin carboxylase C-terminal domain
MIM_c03270	SM01209	MIM_c03270
MIM_c03320	SM00422	helix_turn_helix, mercury resistance
MIM_c03330	SM00849	Metallo-beta-lactamase superfamily
MIM_c03340	SM00903	Flavin reductase like domain
MIM_c03460	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c03460	SM00866	MIM_c03460
MIM_c03530	SM00836	DALR anticodon binding domain
MIM_c03530	SM01016	Arginyl tRNA synthetase N terminal dom
MIM_c03560	SM00917	LeuA allosteric (dimerisation) domain
MIM_c03670	SM00953	MIM_c03670
MIM_c03790	SM00382	ATPases associated with a variety of cellular activities
MIM_c03840	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c03870	SM00382	ATPases associated with a variety of cellular activities
MIM_c03910	SM00363	S4 RNA-binding domain
MIM_c03980	SM00382	ATPases associated with a variety of cellular activities
MIM_c04030	SM00382	ATPases associated with a variety of cellular activities
MIM_c04040	SM00953	MIM_c04040
MIM_c04060	SM00564	beta-propeller repeat
MIM_c04080	SM01060	MIM_c04080
MIM_c04210	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c04240	SM00382	ATPases associated with a variety of cellular activities
MIM_c04290	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c04290	SM00895	MIM_c04290
MIM_c04350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c04350	SM00866	MIM_c04350
MIM_c04420	SM00965	Secretin and TonB N terminus short domain
MIM_c04460	SM00344	helix_turn_helix ASNC type
MIM_c04630	SM00100	Cyclic nucleotide-monophosphate binding domain
MIM_c04650	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c04660	SM00382	ATPases associated with a variety of cellular activities
MIM_c04720	SM00487	DEAD-like helicases superfamily
MIM_c04720	SM00490	helicase superfamily c-terminal domain
MIM_c04750	SM00382	ATPases associated with a variety of cellular activities
MIM_c04800	SM00382	ATPases associated with a variety of cellular activities
MIM_c04950	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MIM_c05060	SM00382	ATPases associated with a variety of cellular activities
MIM_c05060	SM01086	C-terminal, D2-small domain, of ClpB protein
MIM_c05090	SM00833	Cobalamin synthesis protein cobW C-terminal domain
MIM_c05120	SM00382	ATPases associated with a variety of cellular activities
MIM_c05190	SM00996	S-adenosyl-L-homocysteine hydrolase
MIM_c05190	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
MIM_c05270	SM01118	MIM_c05270
MIM_c05320	SM00487	DEAD-like helicases superfamily
MIM_c05320	SM00490	helicase superfamily c-terminal domain
MIM_c05410	SM00925	MltA specific insert domain
MIM_c05470	SM00749	bacterial OsmY and nodulation domain
MIM_c05550	SM00382	ATPases associated with a variety of cellular activities
MIM_c05650	SM00797	Allophanate hydrolase subunit 2
MIM_c05660	SM00796	Allophanate hydrolase subunit 1
MIM_c05670	SM00387	Histidine kinase-like ATPases
MIM_c05670	SM00388	His Kinase A (phosphoacceptor) domain
MIM_c05680	SM00448	cheY-homologous receiver domain
MIM_c05680	SM00862	Transcriptional regulatory protein, C terminal
MIM_c05700	SM00978	MIM_c05700
MIM_c05710	SM00382	ATPases associated with a variety of cellular activities
MIM_c05830	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c05890	SM00382	ATPases associated with a variety of cellular activities
MIM_c06050	SM00382	ATPases associated with a variety of cellular activities
MIM_c06080	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c06080	SM00866	MIM_c06080
MIM_c06130	SM00382	ATPases associated with a variety of cellular activities
MIM_c06140	SM00382	ATPases associated with a variety of cellular activities
MIM_c06160	SM00072	Guanylate kinase homologues.
MIM_c06170	SM00849	Metallo-beta-lactamase superfamily
MIM_c06240	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c06270	SM00878	Biotin carboxylase C-terminal domain
MIM_c06300	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c06320	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c06330	SM00382	ATPases associated with a variety of cellular activities
MIM_c06350	SM01329	MIM_c06350
MIM_c06360	SM00870	MIM_c06360
MIM_c06380	SM00382	ATPases associated with a variety of cellular activities
MIM_c06470	SM00382	ATPases associated with a variety of cellular activities
MIM_c06470	SM01086	C-terminal, D2-small domain, of ClpB protein
MIM_c06610	SM00834	Putative regulatory protein
MIM_c06650	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c06750	SM00936	Penicillin-binding protein 5, C-terminal domain 
MIM_c06790	SM00729	Elongator protein 3, MiaB family, Radical SAM
MIM_c06890	SM00382	ATPases associated with a variety of cellular activities
MIM_c07000	SM00100	Cyclic nucleotide-monophosphate binding domain
MIM_c07020	SM00382	ATPases associated with a variety of cellular activities
MIM_c07060	SM00382	ATPases associated with a variety of cellular activities
MIM_c07160	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c07200	SM00729	Elongator protein 3, MiaB family, Radical SAM
MIM_c07230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MIM_c07230	SM00387	Histidine kinase-like ATPases
MIM_c07230	SM00388	His Kinase A (phosphoacceptor) domain
MIM_c07240	SM00448	cheY-homologous receiver domain
MIM_c07290	SM00382	ATPases associated with a variety of cellular activities
MIM_c07310	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c07310	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
MIM_c07320	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c07380	SM00450	Rhodanese Homology Domain
MIM_c07390	SM00855	Phosphoglycerate mutase family
MIM_c07410	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MIM_c07410	SM00245	tail specific protease
MIM_c07430	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MIM_c07520	SM00382	ATPases associated with a variety of cellular activities
MIM_c07610	SM00487	DEAD-like helicases superfamily
MIM_c07610	SM00490	helicase superfamily c-terminal domain
MIM_c07770	SM00318	Staphylococcal nuclease homologues
MIM_c07820	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c07840	SM00382	ATPases associated with a variety of cellular activities
MIM_c07850	SM01130	MIM_c07850
MIM_c07870	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MIM_c07890	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c07890	SM00448	cheY-homologous receiver domain
MIM_c07920	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MIM_c08050	SM00382	ATPases associated with a variety of cellular activities
MIM_c08060	SM00382	ATPases associated with a variety of cellular activities
MIM_c08120	SM00870	MIM_c08120
MIM_c08150	SM00354	helix_turn _helix lactose operon repressor
MIM_c08310	SM00382	ATPases associated with a variety of cellular activities
MIM_c08320	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c08320	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
MIM_c08370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c08380	SM01060	MIM_c08380
MIM_c08460	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c08490	SM00382	ATPases associated with a variety of cellular activities
MIM_c08530	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c08680	SM00382	ATPases associated with a variety of cellular activities
MIM_c08770	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c08800	SM00382	ATPases associated with a variety of cellular activities
MIM_c08940	SM00382	ATPases associated with a variety of cellular activities
MIM_c08950	SM00382	ATPases associated with a variety of cellular activities
MIM_c08960	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c09010	SM00845	GatB domain
MIM_c09090	SM00478	endonuclease III
MIM_c09090	SM00525	MIM_c09090
MIM_c09110	SM00382	ATPases associated with a variety of cellular activities
MIM_c09140	SM00382	ATPases associated with a variety of cellular activities
MIM_c09180	SM00421	helix_turn_helix, Lux Regulon
MIM_c09310	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c09310	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
MIM_c09330	SM00382	ATPases associated with a variety of cellular activities
MIM_c09350	SM00903	Flavin reductase like domain
MIM_c09390	SM01012	MIM_c09390
MIM_c09420	SM00382	ATPases associated with a variety of cellular activities
MIM_c09450	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MIM_c09470	SM00448	cheY-homologous receiver domain
MIM_c09470	SM00862	Transcriptional regulatory protein, C terminal
MIM_c09480	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MIM_c09480	SM00387	Histidine kinase-like ATPases
MIM_c09480	SM00388	His Kinase A (phosphoacceptor) domain
MIM_c09520	SM00354	helix_turn _helix lactose operon repressor
MIM_c09540	SM00822	MIM_c09540
MIM_c09560	SM00829	Enoylreductase
MIM_c09600	SM00822	MIM_c09600
MIM_c09620	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MIM_c09630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c09630	SM00895	MIM_c09630
MIM_c09640	SM00151	SWI complex, BAF60b domains
MIM_c09670	SM00382	ATPases associated with a variety of cellular activities
MIM_c09800	SM00842	Cell division protein FtsA
MIM_c09810	SM00864	Tubulin/FtsZ family, GTPase domain
MIM_c09810	SM00865	Tubulin/FtsZ family, C-terminal domain
MIM_c09850	SM00957	SecA DEAD-like domain
MIM_c09850	SM00958	SecA preprotein cross-linking domain
MIM_c09860	SM00116	Domain in cystathionine beta-synthase and other proteins.
MIM_c09860	SM00924	MgtE intracellular N domain
MIM_c10020	SM00382	ATPases associated with a variety of cellular activities
MIM_c10100	SM00341	Helicase and RNase D C-terminal
MIM_c10100	SM00487	DEAD-like helicases superfamily
MIM_c10100	SM00490	helicase superfamily c-terminal domain
MIM_c10100	SM00956	MIM_c10100
MIM_c10140	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c10150	SM00382	ATPases associated with a variety of cellular activities
MIM_c10190	SM00278	Helix-hairpin-helix DNA-binding motif class 1
MIM_c10210	SM00798	AICARFT/IMPCHase bienzyme
MIM_c10210	SM00851	MGS-like domain
MIM_c10310	SM00487	DEAD-like helicases superfamily
MIM_c10310	SM00490	helicase superfamily c-terminal domain
MIM_c10340	SM00852	Probable molybdopterin binding domain
MIM_c10350	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c10490	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
MIM_c10490	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
MIM_c10620	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c10700	SM00382	ATPases associated with a variety of cellular activities
MIM_c10770	SM00507	HNH nucleases
MIM_c11100	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c11110	SM00564	beta-propeller repeat
MIM_c11120	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c11180	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c11180	SM00895	MIM_c11180
MIM_c11290	SM00382	ATPases associated with a variety of cellular activities
MIM_c11310	SM00420	helix_turn_helix, Deoxyribose operon repressor
MIM_c11310	SM01134	MIM_c11310
MIM_c11340	SM00448	cheY-homologous receiver domain
MIM_c11350	SM00387	Histidine kinase-like ATPases
MIM_c11570	SM00271	DnaJ molecular chaperone homology domain
MIM_c11610	SM00382	ATPases associated with a variety of cellular activities
MIM_c11640	SM00382	ATPases associated with a variety of cellular activities
MIM_c11690	SM01329	MIM_c11690
MIM_c11710	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MIM_c11740	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c11740	SM00895	MIM_c11740
MIM_c11770	SM00450	Rhodanese Homology Domain
MIM_c11780	SM00463	Small MutS-related domain
MIM_c11800	SM00843	MIM_c11800
MIM_c11820	SM00382	ATPases associated with a variety of cellular activities
MIM_c11900	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c12010	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c12080	SM00882	Coenzyme A transferase
MIM_c12090	SM00882	Coenzyme A transferase
MIM_c12110	SM00382	ATPases associated with a variety of cellular activities
MIM_c12140	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c12180	SM01387	MIM_c12180
MIM_c12190	SM00316	Ribosomal protein S1-like RNA-binding domain
MIM_c12190	SM00322	K homology RNA-binding domain
MIM_c12200	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
MIM_c12240	SM00155	Phospholipase D. Active site motifs.
MIM_c12280	SM01130	MIM_c12280
MIM_c12300	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
MIM_c12310	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
MIM_c12310	SM00534	ATPase domain of DNA mismatch repair MUTS family
MIM_c12320	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c12350	SM00382	ATPases associated with a variety of cellular activities
MIM_c12450	SM00822	MIM_c12450
MIM_c12500	SM00882	Coenzyme A transferase
MIM_c12510	SM00882	Coenzyme A transferase
MIM_c12570	SM00028	Tetratricopeptide repeats
MIM_c12580	SM00840	MIM_c12580
MIM_c12590	SM00478	endonuclease III
MIM_c12650	SM01007	Class II Aldolase and Adducin N-terminal domain
MIM_c12670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c12670	SM00895	MIM_c12670
MIM_c12700	SM00881	CoA binding domain
MIM_c12730	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c12750	SM01060	MIM_c12750
MIM_c12770	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MIM_c12860	SM00382	ATPases associated with a variety of cellular activities
MIM_c13090	SM00841	Elongation factor P, C-terminal
MIM_c13090	SM01185	MIM_c13090
MIM_c13220	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c13220	SM00866	MIM_c13220
MIM_c13290	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c13320	SM00919	Malic enzyme, NAD binding domain
MIM_c13320	SM01274	MIM_c13320
MIM_c13330	SM00861	Transketolase, pyrimidine binding domain
MIM_c13420	SM00382	ATPases associated with a variety of cellular activities
MIM_c13430	SM00382	ATPases associated with a variety of cellular activities
MIM_c13440	SM00382	ATPases associated with a variety of cellular activities
MIM_c13460	SM01130	MIM_c13460
MIM_c13480	SM00316	Ribosomal protein S1-like RNA-binding domain
MIM_c13480	SM00732	Likely ribonuclease with RNase H fold.
MIM_c13490	SM00487	DEAD-like helicases superfamily
MIM_c13490	SM00491	MIM_c13490
MIM_c13540	SM00822	MIM_c13540
MIM_c13570	SM00833	Cobalamin synthesis protein cobW C-terminal domain
MIM_c13890	SM00829	Enoylreductase
MIM_c13930	SM00382	ATPases associated with a variety of cellular activities
MIM_c13940	SM00382	ATPases associated with a variety of cellular activities
MIM_c14010	SM00829	Enoylreductase
MIM_c14060	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c14090	SM00363	S4 RNA-binding domain
MIM_c14110	SM00316	Ribosomal protein S1-like RNA-binding domain
MIM_c14150	SM00838	Elongation factor G C-terminus
MIM_c14180	SM00382	ATPases associated with a variety of cellular activities
MIM_c14250	SM00382	ATPases associated with a variety of cellular activities
MIM_c14310	SM00829	Enoylreductase
MIM_c14330	SM00861	Transketolase, pyrimidine binding domain
MIM_c14360	SM00382	ATPases associated with a variety of cellular activities
MIM_c14370	SM00961	Ribulose bisphosphate carboxylase, small chain
MIM_c14420	SM00320	WD40 repeats
MIM_c14440	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c14460	SM00564	beta-propeller repeat
MIM_c14580	SM01192	MIM_c14580
MIM_c14580	SM01193	MIM_c14580
MIM_c14650	SM00981	MIM_c14650
MIM_c14710	SM00421	helix_turn_helix, Lux Regulon
MIM_c14740	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
MIM_c14740	SM00474	3'-5' exonuclease
MIM_c14740	SM00475	5'-3' exonuclease
MIM_c14740	SM00482	DNA polymerase A domain
MIM_c14810	SM00861	Transketolase, pyrimidine binding domain
MIM_c14870	SM00382	ATPases associated with a variety of cellular activities
MIM_c14890	SM00670	Large family of predicted nucleotide-binding domains
MIM_c14960	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c14970	SM00116	Domain in cystathionine beta-synthase and other proteins.
MIM_c15010	SM01005	Alanine racemase, C-terminal domain
MIM_c15030	SM00382	ATPases associated with a variety of cellular activities
MIM_c15090	SM00382	ATPases associated with a variety of cellular activities
MIM_c15170	SM00487	DEAD-like helicases superfamily
MIM_c15170	SM00490	helicase superfamily c-terminal domain
MIM_c15170	SM00847	Helicase associated domain (HA2)  Add an annotation
MIM_c15180	SM00481	DNA polymerase alpha chain like domain
MIM_c15220	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
MIM_c15250	SM00382	ATPases associated with a variety of cellular activities
MIM_c15270	SM00316	Ribosomal protein S1-like RNA-binding domain
MIM_c15400	SM01119	MIM_c15400
MIM_c15500	SM00382	ATPases associated with a variety of cellular activities
MIM_c15540	SM01091	Transporter associated domain
MIM_c15550	SM00382	ATPases associated with a variety of cellular activities
MIM_c15590	SM00316	Ribosomal protein S1-like RNA-binding domain
MIM_c15590	SM00357	Cold shock protein domain
MIM_c15590	SM00955	MIM_c15590
MIM_c15600	SM00967	RNA 2'-O ribose methyltransferase substrate binding
MIM_c15620	SM00411	bacterial (prokaryotic) histone like domain
MIM_c15710	SM00448	cheY-homologous receiver domain
MIM_c15710	SM00862	Transcriptional regulatory protein, C terminal
MIM_c15720	SM00387	Histidine kinase-like ATPases
MIM_c15720	SM00388	His Kinase A (phosphoacceptor) domain
MIM_c15860	SM00357	Cold shock protein domain
MIM_c15880	SM00382	ATPases associated with a variety of cellular activities
MIM_c15880	SM01086	C-terminal, D2-small domain, of ClpB protein
MIM_c16000	SM00904	Riboflavin kinase
MIM_c16120	SM00465	GIY-YIG type nucleases (URI domain)
MIM_c16120	SM00479	MIM_c16120
MIM_c16170	SM00986	Uracil DNA glycosylase superfamily
MIM_c16170	SM00987	UreE urease accessory protein, C-terminal domain 
MIM_c16180	SM00100	Cyclic nucleotide-monophosphate binding domain
MIM_c16180	SM00419	helix_turn_helix, cAMP Regulatory protein
MIM_c16280	SM00240	Forkhead associated domain
MIM_c16420	SM00479	MIM_c16420
MIM_c16450	SM00278	Helix-hairpin-helix DNA-binding motif class 1
MIM_c16450	SM00465	GIY-YIG type nucleases (URI domain)
MIM_c16510	SM00893	Electron transfer flavoprotein domain
MIM_c16520	SM00893	Electron transfer flavoprotein domain
MIM_c16610	SM00829	Enoylreductase
MIM_c16620	SM00046	Diacylglycerol kinase catalytic domain (presumed)
MIM_c16640	SM00116	Domain in cystathionine beta-synthase and other proteins.
MIM_c16720	SM01329	MIM_c16720
MIM_c16730	SM00859	Semialdehyde dehydrogenase, NAD binding domain
MIM_c16810	SM00382	ATPases associated with a variety of cellular activities
MIM_c16840	SM00382	ATPases associated with a variety of cellular activities
MIM_c16930	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MIM_c17020	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c17120	SM00829	Enoylreductase
MIM_c17190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MIM_c17190	SM00387	Histidine kinase-like ATPases
MIM_c17190	SM00388	His Kinase A (phosphoacceptor) domain
MIM_c17200	SM00448	cheY-homologous receiver domain
MIM_c17200	SM00862	Transcriptional regulatory protein, C terminal
MIM_c17320	SM00344	helix_turn_helix ASNC type
MIM_c17350	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MIM_c17400	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c17410	SM00382	ATPases associated with a variety of cellular activities
MIM_c17440	SM01130	MIM_c17440
MIM_c17480	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c17660	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c17690	SM00822	MIM_c17690
MIM_c17720	SM01007	Class II Aldolase and Adducin N-terminal domain
MIM_c17750	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c17850	SM00562	MIM_c17850
MIM_c17910	SM00564	beta-propeller repeat
MIM_c17960	SM00244	prohibitin homologues
MIM_c17970	SM00244	prohibitin homologues
MIM_c17990	SM00788	Adenylosuccinate synthetase
MIM_c18020	SM00400	zinc finger
MIM_c18020	SM00493	MIM_c18020
MIM_c18020	SM00766	DNA primase DnaG DnaB-binding
MIM_c18190	SM00487	DEAD-like helicases superfamily
MIM_c18190	SM00490	helicase superfamily c-terminal domain
MIM_c18220	SM00382	ATPases associated with a variety of cellular activities
MIM_c18290	SM00881	CoA binding domain
MIM_c18400	SM00357	Cold shock protein domain
MIM_c18400	SM00382	ATPases associated with a variety of cellular activities
MIM_c18400	SM00959	Rho termination factor, N-terminal domain
MIM_c18420	SM00387	Histidine kinase-like ATPases
MIM_c18420	SM00433	TopoisomeraseII
MIM_c18430	SM00434	DNA Topoisomerase IV
MIM_c18450	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
MIM_c18510	SM00226	Low molecular weight phosphatase family
MIM_c18560	SM00271	DnaJ molecular chaperone homology domain
MIM_c18680	SM00937	MIM_c18680
MIM_c18750	SM00382	ATPases associated with a variety of cellular activities
MIM_c18770	SM00849	Metallo-beta-lactamase superfamily
MIM_c18790	SM00481	DNA polymerase alpha chain like domain
MIM_c18840	SM00382	ATPases associated with a variety of cellular activities
MIM_c18850	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MIM_c18850	SM00954	Region found in RelA / SpoT proteins
MIM_c18860	SM01409	MIM_c18860
MIM_c18870	SM00072	Guanylate kinase homologues.
MIM_c18930	SM00729	Elongator protein 3, MiaB family, Radical SAM
MIM_c18940	SM01230	MIM_c18940
MIM_c18950	SM00387	Histidine kinase-like ATPases
MIM_c18950	SM00388	His Kinase A (phosphoacceptor) domain
MIM_c18960	SM00382	ATPases associated with a variety of cellular activities
MIM_c18960	SM00448	cheY-homologous receiver domain
MIM_c18970	SM00382	ATPases associated with a variety of cellular activities
MIM_c19010	SM00487	DEAD-like helicases superfamily
MIM_c19010	SM00490	helicase superfamily c-terminal domain
MIM_c19040	SM00382	ATPases associated with a variety of cellular activities
MIM_c19120	SM00382	ATPases associated with a variety of cellular activities
MIM_c19130	SM00382	ATPases associated with a variety of cellular activities
MIM_c19180	SM00421	helix_turn_helix, Lux Regulon
MIM_c19180	SM00448	cheY-homologous receiver domain
MIM_c19190	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MIM_c19190	SM00091	PAS domain
MIM_c19190	SM00387	Histidine kinase-like ATPases
MIM_c19190	SM00388	His Kinase A (phosphoacceptor) domain
MIM_c19270	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c19310	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MIM_c19400	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MIM_c19420	SM00935	Outer membrane protein (OmpH-like)
MIM_c19490	SM00967	RNA 2'-O ribose methyltransferase substrate binding
MIM_c19540	SM00244	prohibitin homologues
MIM_c19630	SM00248	ankyrin repeats
MIM_c19650	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
MIM_c19780	SM00478	endonuclease III
MIM_c19800	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c19820	SM00382	ATPases associated with a variety of cellular activities
MIM_c19830	SM00354	helix_turn _helix lactose operon repressor
MIM_c20050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c20050	SM00895	MIM_c20050
MIM_c20060	SM01130	MIM_c20060
MIM_c20250	SM00382	ATPases associated with a variety of cellular activities
MIM_c20260	SM00382	ATPases associated with a variety of cellular activities
MIM_c20450	SM00822	MIM_c20450
MIM_c20460	SM00822	MIM_c20460
MIM_c20630	SM00829	Enoylreductase
MIM_c20720	SM00382	ATPases associated with a variety of cellular activities
MIM_c20750	SM00382	ATPases associated with a variety of cellular activities
MIM_c20760	SM00382	ATPases associated with a variety of cellular activities
MIM_c20790	SM00822	MIM_c20790
MIM_c20900	SM00881	CoA binding domain
MIM_c21260	SM00382	ATPases associated with a variety of cellular activities
MIM_c21330	SM00363	S4 RNA-binding domain
MIM_c21350	SM00938	Nitrogen regulatory protein P-II
MIM_c21410	SM00257	Lysin motif
MIM_c21440	SM01207	MIM_c21440
MIM_c21490	SM00382	ATPases associated with a variety of cellular activities
MIM_c21520	SM00965	Secretin and TonB N terminus short domain
MIM_c21550	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c21640	SM00116	Domain in cystathionine beta-synthase and other proteins.
MIM_c21640	SM01240	MIM_c21640
MIM_c21650	SM01211	MIM_c21650
MIM_c21720	SM00867	YceI-like domain 
MIM_c21790	SM00422	helix_turn_helix, mercury resistance
MIM_c21800	SM00411	bacterial (prokaryotic) histone like domain
MIM_c21810	SM00873	B3/4 domain
MIM_c21810	SM00874	tRNA synthetase B5 domain
MIM_c21810	SM00896	Ferredoxin-fold anticodon binding domain
MIM_c21850	SM00382	ATPases associated with a variety of cellular activities
MIM_c21880	SM00938	Nitrogen regulatory protein P-II
MIM_c21950	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
MIM_c22000	SM00382	ATPases associated with a variety of cellular activities
MIM_c22000	SM00464	Found in ATP-dependent protease La (LON)
MIM_c22010	SM00382	ATPases associated with a variety of cellular activities
MIM_c22010	SM00994	ClpX C4-type zinc finger
MIM_c22010	SM01086	C-terminal, D2-small domain, of ClpB protein
MIM_c22090	SM00382	ATPases associated with a variety of cellular activities
MIM_c22150	SM00988	UreE urease accessory protein, N-terminal domain
MIM_c22260	SM00357	Cold shock protein domain
MIM_c22270	SM00382	ATPases associated with a variety of cellular activities
MIM_c22270	SM01086	C-terminal, D2-small domain, of ClpB protein
MIM_c22310	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c22310	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
MIM_c22320	SM00382	ATPases associated with a variety of cellular activities
MIM_c22350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c22350	SM00895	MIM_c22350
MIM_c22360	SM00858	MIM_c22360
MIM_c22640	SM00382	ATPases associated with a variety of cellular activities
MIM_c22650	SM00382	ATPases associated with a variety of cellular activities
MIM_c22660	SM00100	Cyclic nucleotide-monophosphate binding domain
MIM_c22660	SM00419	helix_turn_helix, cAMP Regulatory protein
MIM_c22730	SM00278	Helix-hairpin-helix DNA-binding motif class 1
MIM_c22760	SM00028	Tetratricopeptide repeats
MIM_c22780	SM00411	bacterial (prokaryotic) histone like domain
MIM_c22790	SM00316	Ribosomal protein S1-like RNA-binding domain
MIM_c22840	SM00830	Chorismate mutase type II
MIM_c22860	SM00434	DNA Topoisomerase IV
MIM_c22960	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MIM_c22960	SM00245	tail specific protease
MIM_c22990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MIM_c22990	SM00387	Histidine kinase-like ATPases
MIM_c22990	SM00388	His Kinase A (phosphoacceptor) domain
MIM_c23000	SM00448	cheY-homologous receiver domain
MIM_c23000	SM00862	Transcriptional regulatory protein, C terminal
MIM_c23280	SM00829	Enoylreductase
MIM_c23290	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c23320	SM01209	MIM_c23320
MIM_c23320	SM01210	MIM_c23320
MIM_c23510	SM00871	Bacterial transcription activator, effector binding domain
MIM_c23570	SM00882	Coenzyme A transferase
MIM_c23580	SM00882	Coenzyme A transferase
MIM_c23810	SM00358	Double-stranded RNA binding motif
MIM_c23810	SM00535	Ribonuclease III family
MIM_c23830	SM00838	Elongation factor G C-terminus
MIM_c23840	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MIM_c23890	SM00825	Beta-ketoacyl synthase
MIM_c23910	SM00822	MIM_c23910
MIM_c23920	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MIM_c23990	SM00644	MIM_c23990
MIM_c24030	SM00363	S4 RNA-binding domain
MIM_c24040	SM00316	Ribosomal protein S1-like RNA-binding domain
MIM_c24070	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c24110	SM00954	Region found in RelA / SpoT proteins
MIM_c24190	SM00478	endonuclease III
MIM_c24190	SM00525	MIM_c24190
MIM_c24200	SM00382	ATPases associated with a variety of cellular activities
MIM_c24210	SM00382	ATPases associated with a variety of cellular activities
MIM_c24280	SM00278	Helix-hairpin-helix DNA-binding motif class 1
MIM_c24280	SM00292	breast cancer carboxy-terminal domain
MIM_c24280	SM00532	Ligase N family
MIM_c24290	SM00771	ZipA, C-terminal domain (FtsZ-binding)
MIM_c24300	SM00968	SMC proteins Flexible Hinge Domain
MIM_c24320	SM00986	Uracil DNA glycosylase superfamily
MIM_c24320	SM00987	UreE urease accessory protein, C-terminal domain 
MIM_c24340	SM00448	cheY-homologous receiver domain
MIM_c24340	SM00862	Transcriptional regulatory protein, C terminal
MIM_c24350	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MIM_c24350	SM00387	Histidine kinase-like ATPases
MIM_c24350	SM00388	His Kinase A (phosphoacceptor) domain
MIM_c24400	SM00487	DEAD-like helicases superfamily
MIM_c24400	SM00490	helicase superfamily c-terminal domain
MIM_c24400	SM00982	MIM_c24400
MIM_c24400	SM01058	CarD-like/TRCF domain
MIM_c24430	SM00116	Domain in cystathionine beta-synthase and other proteins.
MIM_c24440	SM00479	MIM_c24440
MIM_c24530	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
MIM_c24540	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
MIM_c24670	SM00829	Enoylreductase
MIM_c24770	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c24820	SM00881	CoA binding domain
MIM_c24860	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
MIM_c24990	SM00822	MIM_c24990
MIM_c25020	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c25170	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c25330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c25360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c25360	SM00895	MIM_c25360
MIM_c25380	SM00870	MIM_c25380
MIM_c25450	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MIM_c25580	SM00014	Acid phosphatase homologues
MIM_c25590	SM00849	Metallo-beta-lactamase superfamily
MIM_c25630	SM00382	ATPases associated with a variety of cellular activities
MIM_c25650	SM00965	Secretin and TonB N terminus short domain
MIM_c25720	SM00382	ATPases associated with a variety of cellular activities
MIM_c25800	SM01006	Siderophore biosynthesis protein domain
MIM_c25890	SM00422	helix_turn_helix, mercury resistance
MIM_c25910	SM00382	ATPases associated with a variety of cellular activities
MIM_c26000	SM00382	ATPases associated with a variety of cellular activities
MIM_c26020	SM01103	MIM_c26020
MIM_c26050	SM00855	Phosphoglycerate mutase family
MIM_c26080	SM00851	MGS-like domain
MIM_c26080	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
MIM_c26090	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
MIM_c26120	SM00493	MIM_c26120
MIM_c26140	SM00382	ATPases associated with a variety of cellular activities
MIM_c26180	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c26180	SM00866	MIM_c26180
MIM_c26290	SM00646	MIM_c26290
MIM_c26300	SM00853	MutL C terminal dimerisation domain
MIM_c26300	SM01340	MIM_c26300
MIM_c26380	SM00382	ATPases associated with a variety of cellular activities
MIM_c26390	SM00382	ATPases associated with a variety of cellular activities
MIM_c26470	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c26500	SM00882	Coenzyme A transferase
MIM_c26510	SM00882	Coenzyme A transferase
MIM_c26530	SM00822	MIM_c26530
MIM_c26630	SM00563	Phosphate acyltransferases
MIM_c26680	SM00650	Ribosomal RNA adenine dimethylases
MIM_c26740	SM00448	cheY-homologous receiver domain
MIM_c26740	SM00862	Transcriptional regulatory protein, C terminal
MIM_c26750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MIM_c26750	SM00387	Histidine kinase-like ATPases
MIM_c26750	SM00388	His Kinase A (phosphoacceptor) domain
MIM_c26820	SM00382	ATPases associated with a variety of cellular activities
MIM_c26860	SM00382	ATPases associated with a variety of cellular activities
MIM_c26910	SM00903	Flavin reductase like domain
MIM_c27100	SM00382	ATPases associated with a variety of cellular activities
MIM_c27130	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c27190	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c27250	SM00382	ATPases associated with a variety of cellular activities
MIM_c27260	SM00382	ATPases associated with a variety of cellular activities
MIM_c27490	SM00382	ATPases associated with a variety of cellular activities
MIM_c27510	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c27520	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c27560	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c27700	SM01001	AIR carboxylase
MIM_c27720	SM00869	Autotransporter beta-domain
MIM_c27740	SM00852	Probable molybdopterin binding domain
MIM_c27770	SM01359	MIM_c27770
MIM_c27770	SM01360	MIM_c27770
MIM_c27790	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
MIM_c27800	SM00861	Transketolase, pyrimidine binding domain
MIM_c27950	SM01323	MIM_c27950
MIM_c27980	SM00729	Elongator protein 3, MiaB family, Radical SAM
MIM_c28010	SM00116	Domain in cystathionine beta-synthase and other proteins.
MIM_c28010	SM01091	Transporter associated domain
MIM_c28030	SM00481	DNA polymerase alpha chain like domain
MIM_c28070	SM00460	Transglutaminase/protease-like homologues
MIM_c28080	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c28220	SM00382	ATPases associated with a variety of cellular activities
MIM_c28290	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c28290	SM00895	MIM_c28290
MIM_c28300	SM00858	MIM_c28300
MIM_c28310	SM01130	MIM_c28310
MIM_c28330	SM00155	Phospholipase D. Active site motifs.
MIM_c28380	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c28390	SM00729	Elongator protein 3, MiaB family, Radical SAM
MIM_c28390	SM00876	Biotin and Thiamin Synthesis associated domain
MIM_c28420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c28420	SM00895	MIM_c28420
MIM_c28480	SM00852	Probable molybdopterin binding domain
MIM_c28490	SM00852	Probable molybdopterin binding domain
MIM_c28510	SM00729	Elongator protein 3, MiaB family, Radical SAM
MIM_c28540	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
MIM_c28550	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MIM_c28550	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
MIM_c28590	SM00448	cheY-homologous receiver domain
MIM_c28590	SM00862	Transcriptional regulatory protein, C terminal
MIM_c28600	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MIM_c28600	SM00387	Histidine kinase-like ATPases
MIM_c28600	SM00388	His Kinase A (phosphoacceptor) domain
MIM_c28660	SM00479	MIM_c28660
MIM_c28680	SM00257	Lysin motif
MIM_c28910	SM00870	MIM_c28910
MIM_c29010	SM00382	ATPases associated with a variety of cellular activities
MIM_c29020	SM00829	Enoylreductase
MIM_c29030	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c29040	SM00833	Cobalamin synthesis protein cobW C-terminal domain
MIM_c29090	SM00226	Low molecular weight phosphatase family
MIM_c29110	SM00244	prohibitin homologues
MIM_c29150	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c29280	SM00859	Semialdehyde dehydrogenase, NAD binding domain
MIM_c29420	SM00878	Biotin carboxylase C-terminal domain
MIM_c29480	SM00955	MIM_c29480
MIM_c29530	SM00563	Phosphate acyltransferases
MIM_c29670	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
MIM_c29680	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c29790	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c29830	SM00344	helix_turn_helix ASNC type
MIM_c30070	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c30080	SM00382	ATPases associated with a variety of cellular activities
MIM_c30220	SM01007	Class II Aldolase and Adducin N-terminal domain
MIM_c30270	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c30330	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
MIM_c30360	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c30390	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c30430	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c30470	SM00382	ATPases associated with a variety of cellular activities
MIM_c30480	SM00382	ATPases associated with a variety of cellular activities
MIM_c30490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c30490	SM00895	MIM_c30490
MIM_c30550	SM00382	ATPases associated with a variety of cellular activities
MIM_c30640	SM00382	ATPases associated with a variety of cellular activities
MIM_c30690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c30690	SM00895	MIM_c30690
MIM_c30710	SM00903	Flavin reductase like domain
MIM_c30730	SM01007	Class II Aldolase and Adducin N-terminal domain
MIM_c30840	SM00382	ATPases associated with a variety of cellular activities
MIM_c30880	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MIM_c30920	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c30920	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
MIM_c30930	SM00947	Carbonic anhydrase
MIM_c30950	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c31040	SM00849	Metallo-beta-lactamase superfamily
MIM_c31100	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MIM_c31120	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MIM_c31130	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c31180	SM00829	Enoylreductase
MIM_c31190	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MIM_c31210	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c31360	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c31480	SM00344	helix_turn_helix ASNC type
MIM_c31570	SM00870	MIM_c31570
MIM_c31750	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c31790	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MIM_c31810	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c31850	SM00870	MIM_c31850
MIM_c31860	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c31920	SM00487	DEAD-like helicases superfamily
MIM_c31920	SM00490	helicase superfamily c-terminal domain
MIM_c32010	SM00883	Chaperonin 10 Kd subunit
MIM_c32030	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c32070	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
MIM_c32180	SM00822	MIM_c32180
MIM_c32200	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c32220	SM00880	MIM_c32220
MIM_c32220	SM01118	MIM_c32220
MIM_c32230	SM00382	ATPases associated with a variety of cellular activities
MIM_c32230	SM00962	SRP54-type protein, GTPase domain
MIM_c32230	SM00963	SRP54-type protein, helical bundle domain
MIM_c32430	SM01400	MIM_c32430
MIM_c32470	SM00028	Tetratricopeptide repeats
MIM_c32480	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
MIM_c32480	SM01232	MIM_c32480
MIM_c32580	SM00984	UDP binding domain
MIM_c32660	SM00382	ATPases associated with a variety of cellular activities
MIM_c32670	SM00382	ATPases associated with a variety of cellular activities
MIM_c32710	SM00822	MIM_c32710
MIM_c32810	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c32840	SM00382	ATPases associated with a variety of cellular activities
MIM_c32890	SM00481	DNA polymerase alpha chain like domain
MIM_c33100	SM00650	Ribosomal RNA adenine dimethylases
MIM_c33130	SM00257	Lysin motif
MIM_c33160	SM00382	ATPases associated with a variety of cellular activities
MIM_c33160	SM00962	SRP54-type protein, GTPase domain
MIM_c33160	SM00963	SRP54-type protein, helical bundle domain
MIM_c33180	SM00644	MIM_c33180
MIM_c33220	SM00387	Histidine kinase-like ATPases
MIM_c33240	SM00869	Autotransporter beta-domain
MIM_c33250	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c33350	SM00825	Beta-ketoacyl synthase
MIM_c33420	SM00822	MIM_c33420
MIM_c33430	SM01144	MIM_c33430
MIM_c33510	SM01236	MIM_c33510
MIM_c33550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c33550	SM00895	MIM_c33550
MIM_c33700	SM00903	Flavin reductase like domain
MIM_c33730	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c33820	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c33900	SM00382	ATPases associated with a variety of cellular activities
MIM_c33910	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c34010	SM00822	MIM_c34010
MIM_c34040	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MIM_c34040	SM00382	ATPases associated with a variety of cellular activities
MIM_c34050	SM01116	MIM_c34050
MIM_c34060	SM00382	ATPases associated with a variety of cellular activities
MIM_c34150	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c34220	SM00382	ATPases associated with a variety of cellular activities
MIM_c34250	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c34310	SM00507	HNH nucleases
MIM_c34320	SM00382	ATPases associated with a variety of cellular activities
MIM_c34380	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c34430	SM01092	CO dehydrogenase flavoprotein C-terminal domain
MIM_c34440	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MIM_c34460	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c34530	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c34530	SM00895	MIM_c34530
MIM_c34580	SM00382	ATPases associated with a variety of cellular activities
MIM_c34650	SM00382	ATPases associated with a variety of cellular activities
MIM_c34730	SM00903	Flavin reductase like domain
MIM_c34740	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c34830	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c34860	SM00382	ATPases associated with a variety of cellular activities
MIM_c34870	SM00354	helix_turn _helix lactose operon repressor
MIM_c34890	SM00822	MIM_c34890
MIM_c34920	SM01007	Class II Aldolase and Adducin N-terminal domain
MIM_c34950	SM00450	Rhodanese Homology Domain
MIM_c35020	SM00382	ATPases associated with a variety of cellular activities
MIM_c35030	SM00382	ATPases associated with a variety of cellular activities
MIM_c35140	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c35270	SM00912	haemagglutination activity domain
MIM_c35330	SM00822	MIM_c35330
MIM_c35360	SM00382	ATPases associated with a variety of cellular activities
MIM_c35460	SM00382	ATPases associated with a variety of cellular activities
MIM_c35470	SM00382	ATPases associated with a variety of cellular activities
MIM_c35550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c35550	SM00895	MIM_c35550
MIM_c35640	SM00382	ATPases associated with a variety of cellular activities
MIM_c35730	SM00448	cheY-homologous receiver domain
MIM_c35730	SM00862	Transcriptional regulatory protein, C terminal
MIM_c35790	SM00710	Parallel beta-helix repeats
MIM_c35830	SM00998	Adenylosuccinate lyase C-terminus
MIM_c35840	SM00882	Coenzyme A transferase
MIM_c35850	SM00882	Coenzyme A transferase
MIM_c35940	SM00382	ATPases associated with a variety of cellular activities
MIM_c35980	SM00354	helix_turn _helix lactose operon repressor
MIM_c36060	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MIM_c36120	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c36130	SM00829	Enoylreductase
MIM_c36270	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c36340	SM00318	Staphylococcal nuclease homologues
MIM_c36490	SM00347	helix_turn_helix multiple antibiotic resistance protein
MIM_c36530	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c36550	SM00833	Cobalamin synthesis protein cobW C-terminal domain
MIM_c36600	SM00382	ATPases associated with a variety of cellular activities
MIM_c36610	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c36620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c36640	SM00382	ATPases associated with a variety of cellular activities
MIM_c36650	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c36660	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c36660	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
MIM_c36700	SM00849	Metallo-beta-lactamase superfamily
MIM_c36800	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MIM_c36810	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c36810	SM00895	MIM_c36810
MIM_c36900	SM00422	helix_turn_helix, mercury resistance
MIM_c36940	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c36950	SM01018	B12 binding domain
MIM_c36990	SM00905	Dihydroneopterin aldolase
MIM_c37050	SM00937	MIM_c37050
MIM_c37160	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c37160	SM00866	MIM_c37160
MIM_c37200	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c37260	SM00382	ATPases associated with a variety of cellular activities
MIM_c37310	SM00919	Malic enzyme, NAD binding domain
MIM_c37310	SM01274	MIM_c37310
MIM_c37340	SM00271	DnaJ molecular chaperone homology domain
MIM_c37370	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c37440	SM00450	Rhodanese Homology Domain
MIM_c37450	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c37480	SM00382	ATPases associated with a variety of cellular activities
MIM_c37570	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c37570	SM00866	MIM_c37570
MIM_c37580	SM00858	MIM_c37580
MIM_c37790	SM00984	UDP binding domain
MIM_c37810	SM00382	ATPases associated with a variety of cellular activities
MIM_c37940	SM00382	ATPases associated with a variety of cellular activities
MIM_c37950	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c37970	SM00871	Bacterial transcription activator, effector binding domain
MIM_c38170	SM00382	ATPases associated with a variety of cellular activities
MIM_c38190	SM00062	Bacterial periplasmic substrate-binding proteins
MIM_c38210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c38270	SM00822	MIM_c38270
MIM_c38350	SM00881	CoA binding domain
MIM_c38370	SM00903	Flavin reductase like domain
MIM_c38430	SM00564	beta-propeller repeat
MIM_c38440	SM00448	cheY-homologous receiver domain
MIM_c38440	SM00862	Transcriptional regulatory protein, C terminal
MIM_c38640	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c38640	SM00448	cheY-homologous receiver domain
MIM_c38650	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MIM_c38690	SM01219	MIM_c38690
MIM_c38730	SM00382	ATPases associated with a variety of cellular activities
MIM_c38790	SM01004	Delta-aminolevulinic acid dehydratase
MIM_c38830	SM00100	Cyclic nucleotide-monophosphate binding domain
MIM_c38940	SM00662	RNA polymerases D
MIM_c38950	SM00363	S4 RNA-binding domain
MIM_c38950	SM01390	MIM_c38950
MIM_c38980	SM00316	Ribosomal protein S1-like RNA-binding domain
MIM_c39090	SM01374	MIM_c39090
MIM_c39130	SM00382	ATPases associated with a variety of cellular activities
MIM_c39200	SM00387	Histidine kinase-like ATPases
MIM_c39200	SM00388	His Kinase A (phosphoacceptor) domain
MIM_c39210	SM00448	cheY-homologous receiver domain
MIM_c39210	SM00862	Transcriptional regulatory protein, C terminal
MIM_c39230	SM00564	beta-propeller repeat
MIM_c39240	SM00346	helix_turn_helix isocitrate lyase regulation
MIM_c39320	SM00382	ATPases associated with a variety of cellular activities
MIM_c39330	SM00382	ATPases associated with a variety of cellular activities
MIM_c39340	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
MIM_c39520	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c39520	SM00895	MIM_c39520
MIM_c39600	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
MIM_c39650	SM00322	K homology RNA-binding domain
MIM_c39680	SM01382	MIM_c39680
MIM_c39680	SM01383	MIM_c39680
MIM_c39730	SM01133	MIM_c39730
MIM_c39790	SM00382	ATPases associated with a variety of cellular activities
MIM_c39810	SM00420	helix_turn_helix, Deoxyribose operon repressor
MIM_c39810	SM01134	MIM_c39810
MIM_c39840	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c39850	SM00382	ATPases associated with a variety of cellular activities
MIM_c39860	SM00382	ATPases associated with a variety of cellular activities
MIM_c39910	SM00460	Transglutaminase/protease-like homologues
MIM_c40030	SM00382	ATPases associated with a variety of cellular activities
MIM_c40030	SM00930	MIM_c40030
MIM_c40040	SM01403	MIM_c40040
MIM_c40060	SM00838	Elongation factor G C-terminus
MIM_c40060	SM00889	Elongation factor G, domain IV
MIM_c40090	SM00448	cheY-homologous receiver domain
MIM_c40090	SM00862	Transcriptional regulatory protein, C terminal
MIM_c40110	SM00387	Histidine kinase-like ATPases
MIM_c40110	SM01080	MIM_c40110
MIM_c40180	SM00342	helix_turn_helix, arabinose operon control protein
MIM_c40230	SM00530	Helix-turn-helix XRE-family like proteins 
MIM_c40280	SM00822	MIM_c40280
MIM_c40290	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c40290	SM00895	MIM_c40290
MIM_c40360	SM00563	Phosphate acyltransferases
MIM_c40470	SM00825	Beta-ketoacyl synthase
MIM_c40490	SM00822	MIM_c40490
MIM_c40500	SM00825	Beta-ketoacyl synthase
MIM_c40560	SM00344	helix_turn_helix ASNC type
MIM_c40620	SM00663	RNA polymerase I subunit A N-terminus
MIM_c40670	SM00649	Ribosomal protein L11/L12
MIM_c40680	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
MIM_c40680	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
MIM_c40750	SM00470	ParB-like nuclease domain
MIM_c40780	SM01228	MIM_c40780
MIM_c40810	SM00155	Phospholipase D. Active site motifs.
MIM_c40860	SM00895	MIM_c40860
MIM_c40920	SM00382	ATPases associated with a variety of cellular activities
MIM_c40980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MIM_c41020	SM00382	ATPases associated with a variety of cellular activities
MIM_c41110	SM00881	CoA binding domain
MIM_c41130	SM01007	Class II Aldolase and Adducin N-terminal domain
