locus-tag class description JK629_00005 PF00308 Bacterial dnaA protein JK629_00005 PF08299 Bacterial dnaA protein helix-turn-helix JK629_00005 PF11638 DnaA N-terminal domain JK629_00010 PF01451 Low molecular weight phosphotyrosine protein phosphatase JK629_00020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JK629_00040 PF02585 GlcNAc-PI de-N-acetylase JK629_00045 PF01053 Cys/Met metabolism PLP-dependent enzyme JK629_00050 PF01979 Amidohydrolase family JK629_00075 PF12848 ABC transporter JK629_00075 PF00005 ABC transporter JK629_00085 PF01039 Carboxyl transferase domain JK629_00115 PF01040 UbiA prenyltransferase family JK629_00155 PF01300 Telomere recombination JK629_00170 PF00580 UvrD/REP helicase N-terminal domain JK629_00170 PF13361 UvrD-like helicase C-terminal domain JK629_00175 PF01645 Conserved region in glutamate synthase JK629_00185 PF00072 Response regulator receiver domain JK629_00185 PF00196 Bacterial regulatory proteins, luxR family JK629_00190 PF07730 Histidine kinase JK629_00190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_00210 PF11838 ERAP1-like C-terminal domain JK629_00210 PF01433 Peptidase family M1 domain JK629_00215 PF00270 DEAD/DEAH box helicase JK629_00215 PF00271 Helicase conserved C-terminal domain JK629_00215 PF17191 RecG wedge domain JK629_00225 PF04607 Region found in RelA / SpoT proteins JK629_00225 PF13291 ACT domain JK629_00225 PF02824 TGS domain JK629_00230 PF01475 Ferric uptake regulator family JK629_00235 PF00709 Adenylosuccinate synthetase JK629_00245 PF00202 Aminotransferase class-III JK629_00265 PF08501 Shikimate dehydrogenase substrate binding domain JK629_00265 PF01488 Shikimate / quinate 5-dehydrogenase JK629_00265 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JK629_00275 PF03819 MazG nucleotide pyrophosphohydrolase domain JK629_00285 PF01327 Polypeptide deformylase JK629_00290 PF03652 Holliday junction resolvase JK629_00295 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JK629_00295 PF14602 Hexapeptide repeat of succinyl-transferase JK629_00310 PF00535 Glycosyl transferase family 2 JK629_00315 PF00535 Glycosyl transferase family 2 JK629_00320 PF00535 Glycosyl transferase family 2 JK629_00330 PF00535 Glycosyl transferase family 2 JK629_00335 PF01300 Telomere recombination JK629_00345 PF02272 DHHA1 domain JK629_00345 PF01743 Poly A polymerase head domain JK629_00345 PF00571 CBS domain JK629_00345 PF01368 DHH family JK629_00350 PF02628 Cytochrome oxidase assembly protein JK629_00370 PF00270 DEAD/DEAH box helicase JK629_00370 PF00271 Helicase conserved C-terminal domain JK629_00370 PF00570 HRDC domain JK629_00370 PF16124 RecQ zinc-binding JK629_00370 PF09382 RQC domain JK629_00375 PF00571 CBS domain JK629_00375 PF01380 SIS domain JK629_00380 PF00902 Sec-independent protein translocase protein (TatC) JK629_00390 PF12399 Branched-chain amino acid ATP-binding cassette transporter JK629_00390 PF00005 ABC transporter JK629_00415 PF02397 Bacterial sugar transferase JK629_00420 PF00534 Glycosyl transferases group 1 JK629_00420 PF13439 Glycosyltransferase Family 4 JK629_00460 PF01541 GIY-YIG catalytic domain JK629_00465 PF00534 Glycosyl transferases group 1 JK629_00475 PF13439 Glycosyltransferase Family 4 JK629_00475 PF00534 Glycosyl transferases group 1 JK629_00485 PF00535 Glycosyl transferase family 2 JK629_00500 PF13439 Glycosyltransferase Family 4 JK629_00500 PF00534 Glycosyl transferases group 1 JK629_00505 PF00534 Glycosyl transferases group 1 JK629_00505 PF13439 Glycosyltransferase Family 4 JK629_00515 PF13439 Glycosyltransferase Family 4 JK629_00515 PF00534 Glycosyl transferases group 1 JK629_00525 PF01757 Acyltransferase family JK629_00535 PF00535 Glycosyl transferase family 2 JK629_00540 PF00535 Glycosyl transferase family 2 JK629_00550 PF00534 Glycosyl transferases group 1 JK629_00555 PF01209 ubiE/COQ5 methyltransferase family JK629_00560 PF00535 Glycosyl transferase family 2 JK629_00580 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JK629_00590 PF00005 ABC transporter JK629_00610 PF16916 Dimerisation domain of Zinc Transporter JK629_00610 PF01545 Cation efflux family JK629_00650 PF01370 NAD dependent epimerase/dehydratase family JK629_00655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JK629_00655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JK629_00655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JK629_00660 PF13614 AAA domain JK629_00660 PF02706 Chain length determinant protein JK629_00660 PF13807 G-rich domain on putative tyrosine kinase JK629_00680 PF00005 ABC transporter JK629_00680 PF12848 ABC transporter JK629_00680 PF16326 ABC transporter C-terminal domain JK629_00690 PF00005 ABC transporter JK629_00700 PF01923 Cobalamin adenosyltransferase JK629_00710 PF07517 SecA DEAD-like domain JK629_00710 PF01043 SecA preprotein cross-linking domain JK629_00710 PF07516 SecA Wing and Scaffold domain JK629_00735 PF08281 Sigma-70, region 4 JK629_00735 PF04542 Sigma-70 region 2 JK629_00745 PF02566 OsmC-like protein JK629_00760 PF00781 Diacylglycerol kinase catalytic domain JK629_00765 PF00884 Sulfatase JK629_00775 PF01370 NAD dependent epimerase/dehydratase family JK629_00780 PF00535 Glycosyl transferase family 2 JK629_00795 PF01569 PAP2 superfamily JK629_00805 PF01554 MatE JK629_00820 PF00005 ABC transporter JK629_00825 PF02086 D12 class N6 adenine-specific DNA methyltransferase JK629_00875 PF04151 Bacterial pre-peptidase C-terminal domain JK629_00875 PF04389 Peptidase family M28 JK629_00880 PF03976 Polyphosphate kinase 2 (PPK2) JK629_00885 PF00158 Sigma-54 interaction domain JK629_00885 PF00072 Response regulator receiver domain JK629_00885 PF02954 Bacterial regulatory protein, Fis family JK629_00900 PF13732 Domain of unknown function (DUF4162) JK629_00900 PF00005 ABC transporter JK629_00905 PF00684 DnaJ central domain JK629_00905 PF00226 DnaJ domain JK629_00905 PF01556 DnaJ C terminal domain JK629_00910 PF01025 GrpE JK629_00920 PF08338 Domain of unknown function (DUF1731) JK629_00920 PF01370 NAD dependent epimerase/dehydratase family JK629_00925 PF01266 FAD dependent oxidoreductase JK629_00925 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JK629_00935 PF01063 Amino-transferase class IV JK629_00960 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JK629_00985 PF01037 Lrp/AsnC ligand binding domain JK629_00995 PF01642 Methylmalonyl-CoA mutase JK629_00995 PF02310 B12 binding domain JK629_01015 PF01497 Periplasmic binding protein JK629_01020 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JK629_01025 PF00472 RF-1 domain JK629_01025 PF03462 PCRF domain JK629_01035 PF00586 AIR synthase related protein, N-terminal domain JK629_01035 PF02769 AIR synthase related protein, C-terminal domain JK629_01040 PF07676 WD40-like Beta Propeller Repeat JK629_01045 PF03783 Curli production assembly/transport component CsgG JK629_01070 PF00120 Glutamine synthetase, catalytic domain JK629_01070 PF12437 Glutamine synthetase type III N terminal JK629_01070 PF18318 Glutamine synthetase C-terminal domain JK629_01075 PF01699 Sodium/calcium exchanger protein JK629_01085 PF00156 Phosphoribosyl transferase domain JK629_01110 PF00121 Triosephosphate isomerase JK629_01115 PF08534 Redoxin JK629_01120 PF00528 Binding-protein-dependent transport system inner membrane component JK629_01135 PF00809 Pterin binding enzyme JK629_01140 PF02457 DisA bacterial checkpoint controller nucleotide-binding JK629_01145 PF00664 ABC transporter transmembrane region JK629_01145 PF00005 ABC transporter JK629_01150 PF01416 tRNA pseudouridine synthase JK629_01165 PF07497 Rho termination factor, RNA-binding domain JK629_01165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JK629_01175 PF00293 NUDIX domain JK629_01180 PF00156 Phosphoribosyl transferase domain JK629_01190 PF02237 Biotin protein ligase C terminal domain JK629_01190 PF03099 Biotin/lipoate A/B protein ligase family JK629_01200 PF01434 Peptidase family M41 JK629_01200 PF17862 AAA+ lid domain JK629_01200 PF00004 ATPase family associated with various cellular activities (AAA) JK629_01215 PF02666 Phosphatidylserine decarboxylase JK629_01230 PF10458 Valyl tRNA synthetase tRNA binding arm JK629_01230 PF08264 Anticodon-binding domain of tRNA JK629_01230 PF00133 tRNA synthetases class I (I, L, M and V) JK629_01245 PF00155 Aminotransferase class I and II JK629_01250 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JK629_01250 PF01565 FAD binding domain JK629_01265 PF00535 Glycosyl transferase family 2 JK629_01270 PF08281 Sigma-70, region 4 JK629_01270 PF04542 Sigma-70 region 2 JK629_01275 PF04055 Radical SAM superfamily JK629_01280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JK629_01280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JK629_01285 PF01627 Hpt domain JK629_01285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_01285 PF00512 His Kinase A (phospho-acceptor) domain JK629_01285 PF00072 Response regulator receiver domain JK629_01290 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JK629_01295 PF01784 NIF3 (NGG1p interacting factor 3) JK629_01305 PF01625 Peptide methionine sulfoxide reductase JK629_01345 PF00266 Aminotransferase class-V JK629_01350 PF01494 FAD binding domain JK629_01355 PF01042 Endoribonuclease L-PSP JK629_01360 PF00171 Aldehyde dehydrogenase family JK629_01365 PF00106 short chain dehydrogenase JK629_01380 PF00854 POT family JK629_01385 PF01596 O-methyltransferase JK629_01390 PF01569 PAP2 superfamily JK629_01395 PF02416 mttA/Hcf106 family JK629_01420 PF03575 Peptidase family S51 JK629_01435 PF02557 D-alanyl-D-alanine carboxypeptidase JK629_01440 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JK629_01440 PF01676 Metalloenzyme superfamily JK629_01455 PF00557 Metallopeptidase family M24 JK629_01460 PF01209 ubiE/COQ5 methyltransferase family JK629_01470 PF02424 ApbE family JK629_01480 PF00175 Oxidoreductase NAD-binding domain JK629_01480 PF00111 2Fe-2S iron-sulfur cluster binding domain JK629_01480 PF00970 Oxidoreductase FAD-binding domain JK629_01485 PF02508 Rnf-Nqr subunit, membrane protein JK629_01490 PF02508 Rnf-Nqr subunit, membrane protein JK629_01495 PF04205 FMN-binding domain JK629_01500 PF03116 NQR2, RnfD, RnfE family JK629_01505 PF11973 NQRA C-terminal domain JK629_01505 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) JK629_01520 PF04379 ApaG domain JK629_01530 PF00171 Aldehyde dehydrogenase family JK629_01540 PF08534 Redoxin JK629_01560 PF00293 NUDIX domain JK629_01565 PF02527 rRNA small subunit methyltransferase G JK629_01570 PF00487 Fatty acid desaturase JK629_01575 PF00155 Aminotransferase class I and II JK629_01585 PF02222 ATP-grasp domain JK629_01590 PF02386 Cation transport protein JK629_01595 PF02254 TrkA-N domain JK629_01595 PF02080 TrkA-C domain JK629_01600 PF01209 ubiE/COQ5 methyltransferase family JK629_01610 PF00588 SpoU rRNA Methylase family JK629_01610 PF08032 RNA 2'-O ribose methyltransferase substrate binding JK629_01620 PF01116 Fructose-bisphosphate aldolase class-II JK629_01625 PF01039 Carboxyl transferase domain JK629_01635 PF00312 Ribosomal protein S15 JK629_01640 PF00575 S1 RNA binding domain JK629_01640 PF03725 3' exoribonuclease family, domain 2 JK629_01640 PF01138 3' exoribonuclease family, domain 1 JK629_01640 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JK629_01640 PF00013 KH domain JK629_01665 PF00140 Sigma-70 factor, region 1.2 JK629_01665 PF03979 Sigma-70 factor, region 1.1 JK629_01665 PF04542 Sigma-70 region 2 JK629_01665 PF04545 Sigma-70, region 4 JK629_01665 PF04539 Sigma-70 region 3 JK629_01675 PF00834 Ribulose-phosphate 3 epimerase family JK629_01685 PF06167 Glucose-regulated metallo-peptidase M90 JK629_01695 PF00593 TonB dependent receptor JK629_01695 PF07715 TonB-dependent Receptor Plug Domain JK629_01715 PF00593 TonB dependent receptor JK629_01715 PF07715 TonB-dependent Receptor Plug Domain JK629_01725 PF03773 Predicted permease JK629_01735 PF00873 AcrB/AcrD/AcrF family JK629_01740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JK629_01775 PF00005 ABC transporter JK629_01775 PF02687 FtsX-like permease family JK629_01775 PF12704 MacB-like periplasmic core domain JK629_01780 PF01808 AICARFT/IMPCHase bienzyme JK629_01780 PF02142 MGS-like domain JK629_01800 PF00905 Penicillin binding protein transpeptidase domain JK629_01800 PF03717 Penicillin-binding Protein dimerisation domain JK629_01805 PF01098 Cell cycle protein JK629_01820 PF00528 Binding-protein-dependent transport system inner membrane component JK629_01820 PF12911 N-terminal TM domain of oligopeptide transport permease C JK629_01825 PF17804 Tail specific protease N-terminal domain JK629_01825 PF03572 Peptidase family S41 JK629_01825 PF00595 PDZ domain JK629_01825 PF11818 C-terminal domain of tail specific protease (DUF3340) JK629_01830 PF01975 Survival protein SurE JK629_01840 PF01467 Cytidylyltransferase-like JK629_01850 PF01649 Ribosomal protein S20 JK629_01860 PF09180 Prolyl-tRNA synthetase, C-terminal JK629_01860 PF03129 Anticodon binding domain JK629_01860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JK629_01875 PF01227 GTP cyclohydrolase I JK629_01880 PF09190 DALR domain JK629_01880 PF01406 tRNA synthetases class I (C) catalytic domain JK629_01885 PF01809 Putative membrane protein insertion efficiency factor JK629_01890 PF01790 Prolipoprotein diacylglyceryl transferase JK629_01900 PF07549 SecD/SecF GG Motif JK629_01900 PF02355 Protein export membrane protein JK629_01925 PF00317 Ribonucleotide reductase, all-alpha domain JK629_01925 PF02867 Ribonucleotide reductase, barrel domain JK629_01925 PF03477 ATP cone domain JK629_01935 PF00056 lactate/malate dehydrogenase, NAD binding domain JK629_01935 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JK629_01940 PF00986 DNA gyrase B subunit, carboxyl terminus JK629_01940 PF01751 Toprim domain JK629_01940 PF00204 DNA gyrase B JK629_01940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_01950 PF04055 Radical SAM superfamily JK629_01960 PF05872 Bacterial protein of unknown function (DUF853) JK629_01995 PF06803 Protein of unknown function (DUF1232) JK629_02000 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JK629_02000 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JK629_02010 PF00448 SRP54-type protein, GTPase domain JK629_02010 PF02881 SRP54-type protein, helical bundle domain JK629_02010 PF02978 Signal peptide binding domain JK629_02015 PF07694 5TMR of 5TMR-LYT JK629_02015 PF13492 GAF domain JK629_02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_02015 PF06580 Histidine kinase JK629_02020 PF00072 Response regulator receiver domain JK629_02020 PF04397 LytTr DNA-binding domain JK629_02050 PF00583 Acetyltransferase (GNAT) family JK629_02060 PF01758 Sodium Bile acid symporter family JK629_02075 PF00270 DEAD/DEAH box helicase JK629_02075 PF00271 Helicase conserved C-terminal domain JK629_02080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_02080 PF07568 Histidine kinase JK629_02080 PF12282 Signal transduction histidine kinase JK629_02085 PF00072 Response regulator receiver domain JK629_02085 PF00486 Transcriptional regulatory protein, C terminal JK629_02100 PF08240 Alcohol dehydrogenase GroES-like domain JK629_02100 PF00107 Zinc-binding dehydrogenase JK629_02140 PF00484 Carbonic anhydrase JK629_02150 PF03485 Arginyl tRNA synthetase N terminal domain JK629_02150 PF05746 DALR anticodon binding domain JK629_02150 PF00750 tRNA synthetases class I (R) JK629_02155 PF01914 MarC family integral membrane protein JK629_02185 PF02424 ApbE family JK629_02205 PF17773 UPF0176 acylphosphatase like domain JK629_02205 PF00581 Rhodanese-like domain JK629_02210 PF00581 Rhodanese-like domain JK629_02210 PF12368 Rhodanase C-terminal JK629_02210 PF17773 UPF0176 acylphosphatase like domain JK629_02220 PF00578 AhpC/TSA family JK629_02225 PF00425 chorismate binding enzyme JK629_02225 PF04715 Anthranilate synthase component I, N terminal region JK629_02230 PF00117 Glutamine amidotransferase class-I JK629_02235 PF00591 Glycosyl transferase family, a/b domain JK629_02235 PF02885 Glycosyl transferase family, helical bundle domain JK629_02240 PF00218 Indole-3-glycerol phosphate synthase JK629_02245 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JK629_02250 PF00291 Pyridoxal-phosphate dependent enzyme JK629_02255 PF00290 Tryptophan synthase alpha chain JK629_02260 PF17070 30S ribosomal protein Thx JK629_02265 PF00368 Hydroxymethylglutaryl-coenzyme A reductase JK629_02280 PF03309 Type III pantothenate kinase JK629_02300 PF00571 CBS domain JK629_02300 PF03471 Transporter associated domain JK629_02305 PF00639 PPIC-type PPIASE domain JK629_02305 PF09312 SurA N-terminal domain JK629_02310 PF03301 Tryptophan 2,3-dioxygenase JK629_02315 PF04343 Protein of unknown function, DUF488 JK629_02350 PF01048 Phosphorylase superfamily JK629_02355 PF01209 ubiE/COQ5 methyltransferase family JK629_02370 PF00535 Glycosyl transferase family 2 JK629_02385 PF07992 Pyridine nucleotide-disulphide oxidoreductase JK629_02385 PF18113 Rubredoxin binding C-terminal domain JK629_02395 PF00535 Glycosyl transferase family 2 JK629_02415 PF01225 Mur ligase family, catalytic domain JK629_02415 PF02875 Mur ligase family, glutamate ligase domain JK629_02415 PF08245 Mur ligase middle domain JK629_02435 PF01018 GTP1/OBG JK629_02435 PF01926 50S ribosome-binding GTPase JK629_02465 PF13302 Acetyltransferase (GNAT) domain JK629_02470 PF11954 Domain of unknown function (DUF3471) JK629_02470 PF00144 Beta-lactamase JK629_02480 PF00106 short chain dehydrogenase JK629_02500 PF12833 Helix-turn-helix domain JK629_02515 PF01268 Formate--tetrahydrofolate ligase JK629_02530 PF02222 ATP-grasp domain JK629_02530 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JK629_02535 PF00731 AIR carboxylase JK629_02545 PF01432 Peptidase family M3 JK629_02550 PF04151 Bacterial pre-peptidase C-terminal domain JK629_02550 PF04389 Peptidase family M28 JK629_02570 PF02347 Glycine cleavage system P-protein JK629_02575 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JK629_02575 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JK629_02590 PF00245 Alkaline phosphatase JK629_02595 PF02405 Permease MlaE JK629_02600 PF00005 ABC transporter JK629_02600 PF09383 NIL domain JK629_02615 PF01050 Mannose-6-phosphate isomerase JK629_02615 PF00483 Nucleotidyl transferase JK629_02630 PF02817 e3 binding domain JK629_02630 PF00364 Biotin-requiring enzyme JK629_02630 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JK629_02635 PF00676 Dehydrogenase E1 component JK629_02655 PF03781 Sulfatase-modifying factor enzyme 1 JK629_02660 PF02875 Mur ligase family, glutamate ligase domain JK629_02660 PF08245 Mur ligase middle domain JK629_02660 PF01225 Mur ligase family, catalytic domain JK629_02685 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JK629_02685 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JK629_02695 PF02875 Mur ligase family, glutamate ligase domain JK629_02695 PF08245 Mur ligase middle domain JK629_02700 PF00942 Cellulose binding domain JK629_02700 PF03442 Carbohydrate binding domain X2 JK629_02715 PF02472 Biopolymer transport protein ExbD/TolR JK629_02720 PF01618 MotA/TolQ/ExbB proton channel family JK629_02725 PF03600 Citrate transporter JK629_02735 PF03702 Anhydro-N-acetylmuramic acid kinase JK629_02740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JK629_02740 PF02770 Acyl-CoA dehydrogenase, middle domain JK629_02740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JK629_02755 PF01351 Ribonuclease HII JK629_02775 PF07494 Two component regulator propeller JK629_02775 PF00512 His Kinase A (phospho-acceptor) domain JK629_02775 PF12833 Helix-turn-helix domain JK629_02775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_02775 PF07495 Y_Y_Y domain JK629_02775 PF00072 Response regulator receiver domain JK629_02780 PF00691 OmpA family JK629_02790 PF03099 Biotin/lipoate A/B protein ligase family JK629_02815 PF00152 tRNA synthetases class II (D, K and N) JK629_02815 PF01336 OB-fold nucleic acid binding domain JK629_02820 PF00041 Fibronectin type III domain JK629_02820 PF00704 Glycosyl hydrolases family 18 JK629_02835 PF00202 Aminotransferase class-III JK629_02840 PF01476 LysM domain JK629_02840 PF00877 NlpC/P60 family JK629_02845 PF00291 Pyridoxal-phosphate dependent enzyme JK629_02855 PF07730 Histidine kinase JK629_02880 PF00364 Biotin-requiring enzyme JK629_02880 PF02779 Transketolase, pyrimidine binding domain JK629_02880 PF02780 Transketolase, C-terminal domain JK629_02890 PF01012 Electron transfer flavoprotein domain JK629_02890 PF00766 Electron transfer flavoprotein FAD-binding domain JK629_02900 PF07670 Nucleoside recognition JK629_02900 PF07662 Na+ dependent nucleoside transporter C-terminus JK629_02900 PF01773 Na+ dependent nucleoside transporter N-terminus JK629_02910 PF00303 Thymidylate synthase JK629_02925 PF12867 DinB superfamily JK629_02925 PF03781 Sulfatase-modifying factor enzyme 1 JK629_02930 PF10017 Histidine-specific methyltransferase, SAM-dependent JK629_02945 PF00186 Dihydrofolate reductase JK629_02950 PF03881 Fructosamine kinase JK629_02955 PF00698 Acyl transferase domain JK629_02965 PF16363 GDP-mannose 4,6 dehydratase JK629_02970 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JK629_02975 PF02390 Putative methyltransferase JK629_02975 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JK629_03030 PF05190 MutS family domain IV JK629_03030 PF00488 MutS domain V JK629_03030 PF05192 MutS domain III JK629_03030 PF05188 MutS domain II JK629_03030 PF01624 MutS domain I JK629_03035 PF00588 SpoU rRNA Methylase family JK629_03035 PF08032 RNA 2'-O ribose methyltransferase substrate binding JK629_03080 PF00202 Aminotransferase class-III JK629_03085 PF01594 AI-2E family transporter JK629_03105 PF01624 MutS domain I JK629_03105 PF05188 MutS domain II JK629_03105 PF05192 MutS domain III JK629_03105 PF05190 MutS family domain IV JK629_03105 PF00488 MutS domain V JK629_03130 PF06969 HemN C-terminal domain JK629_03130 PF04055 Radical SAM superfamily JK629_03135 PF02075 Crossover junction endodeoxyribonuclease RuvC JK629_03145 PF00535 Glycosyl transferase family 2 JK629_03160 PF05569 BlaR1 peptidase M56 JK629_03160 PF00905 Penicillin binding protein transpeptidase domain JK629_03185 PF02233 NAD(P) transhydrogenase beta subunit JK629_03190 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JK629_03190 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JK629_03190 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JK629_03195 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JK629_03195 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JK629_03205 PF01272 Transcription elongation factor, GreA/GreB, C-term JK629_03205 PF14760 Rnk N-terminus JK629_03210 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JK629_03210 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JK629_03220 PF00072 Response regulator receiver domain JK629_03220 PF00158 Sigma-54 interaction domain JK629_03220 PF02954 Bacterial regulatory protein, Fis family JK629_03225 PF00512 His Kinase A (phospho-acceptor) domain JK629_03225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_03225 PF00989 PAS fold JK629_03225 PF08447 PAS fold JK629_03235 PF01339 CheB methylesterase JK629_03235 PF00072 Response regulator receiver domain JK629_03265 PF00574 Clp protease JK629_03270 PF00085 Thioredoxin JK629_03275 PF07733 Bacterial DNA polymerase III alpha NTPase domain JK629_03275 PF14579 Helix-hairpin-helix motif JK629_03275 PF01336 OB-fold nucleic acid binding domain JK629_03275 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JK629_03275 PF02811 PHP domain JK629_03290 PF00886 Ribosomal protein S16 JK629_03295 PF01782 RimM N-terminal domain JK629_03300 PF05175 Methyltransferase small domain JK629_03315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JK629_03315 PF02770 Acyl-CoA dehydrogenase, middle domain JK629_03315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JK629_03335 PF00111 2Fe-2S iron-sulfur cluster binding domain JK629_03340 PF07992 Pyridine nucleotide-disulphide oxidoreductase JK629_03345 PF01521 Iron-sulphur cluster biosynthesis JK629_03345 PF01106 NifU-like domain JK629_03350 PF01883 Iron-sulfur cluster assembly protein JK629_03350 PF10609 NUBPL iron-transfer P-loop NTPase JK629_03355 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JK629_03355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JK629_03365 PF02390 Putative methyltransferase JK629_03370 PF03033 Glycosyltransferase family 28 N-terminal domain JK629_03370 PF04101 Glycosyltransferase family 28 C-terminal domain JK629_03375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_03375 PF00512 His Kinase A (phospho-acceptor) domain JK629_03375 PF00989 PAS fold JK629_03375 PF16736 Single Cache-like JK629_03380 PF00072 Response regulator receiver domain JK629_03380 PF00486 Transcriptional regulatory protein, C terminal JK629_03395 PF00579 tRNA synthetases class I (W and Y) JK629_03410 PF01979 Amidohydrolase family JK629_03415 PF00535 Glycosyl transferase family 2 JK629_03430 PF01293 Phosphoenolpyruvate carboxykinase JK629_03435 PF04241 Protein of unknown function (DUF423) JK629_03445 PF04298 Putative neutral zinc metallopeptidase JK629_03450 PF13603 Leucyl-tRNA synthetase, Domain 2 JK629_03450 PF09334 tRNA synthetases class I (M) JK629_03450 PF08264 Anticodon-binding domain of tRNA JK629_03460 PF18075 FtsX extracellular domain JK629_03470 PF02673 Bacitracin resistance protein BacA JK629_03475 PF01509 TruB family pseudouridylate synthase (N terminal domain) JK629_03485 PF13673 Acetyltransferase (GNAT) domain JK629_03485 PF13302 Acetyltransferase (GNAT) domain JK629_03485 PF03352 Methyladenine glycosylase JK629_03485 PF00117 Glutamine amidotransferase class-I JK629_03485 PF00958 GMP synthase C terminal domain JK629_03505 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JK629_03515 PF01613 Flavin reductase like domain JK629_03520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_03520 PF00512 His Kinase A (phospho-acceptor) domain JK629_03530 PF01230 HIT domain JK629_03535 PF01272 Transcription elongation factor, GreA/GreB, C-term JK629_03535 PF03449 Transcription elongation factor, N-terminal JK629_03550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_03550 PF00512 His Kinase A (phospho-acceptor) domain JK629_03550 PF09308 LuxQ, periplasmic JK629_03550 PF00072 Response regulator receiver domain JK629_03555 PF02954 Bacterial regulatory protein, Fis family JK629_03555 PF00072 Response regulator receiver domain JK629_03555 PF00158 Sigma-54 interaction domain JK629_03565 PF03462 PCRF domain JK629_03565 PF00472 RF-1 domain JK629_03580 PF04973 Nicotinamide mononucleotide transporter JK629_03590 PF01884 PcrB family JK629_03600 PF05221 S-adenosyl-L-homocysteine hydrolase JK629_03600 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JK629_03605 PF04480 Protein of unknown function (DUF559) JK629_03605 PF03852 DNA mismatch endonuclease Vsr JK629_03610 PF00155 Aminotransferase class I and II JK629_03615 PF00141 Peroxidase JK629_03625 PF00795 Carbon-nitrogen hydrolase JK629_03635 PF00156 Phosphoribosyl transferase domain JK629_03645 PF03129 Anticodon binding domain JK629_03660 PF03372 Endonuclease/Exonuclease/phosphatase family JK629_03665 PF00248 Aldo/keto reductase family JK629_03670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JK629_03670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JK629_03670 PF02770 Acyl-CoA dehydrogenase, middle domain JK629_03675 PF18073 Rubredoxin metal binding domain JK629_03680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_03680 PF07730 Histidine kinase JK629_03685 PF00196 Bacterial regulatory proteins, luxR family JK629_03685 PF00072 Response regulator receiver domain JK629_03700 PF02261 Aspartate decarboxylase JK629_03705 PF02569 Pantoate-beta-alanine ligase JK629_03710 PF08323 Starch synthase catalytic domain JK629_03710 PF00534 Glycosyl transferases group 1 JK629_03720 PF01380 SIS domain JK629_03735 PF01063 Amino-transferase class IV JK629_03740 PF02874 ATP synthase alpha/beta family, beta-barrel domain JK629_03740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JK629_03745 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JK629_03765 PF10150 Ribonuclease E/G family JK629_03765 PF00575 S1 RNA binding domain JK629_03770 PF00216 Bacterial DNA-binding protein JK629_03775 PF14815 NUDIX domain JK629_03775 PF00730 HhH-GPD superfamily base excision DNA repair protein JK629_03775 PF00633 Helix-hairpin-helix motif JK629_03780 PF00436 Single-strand binding protein family JK629_03785 PF00571 CBS domain JK629_03785 PF03471 Transporter associated domain JK629_03800 PF00829 Ribosomal prokaryotic L21 protein JK629_03805 PF01016 Ribosomal L27 protein JK629_03815 PF17149 Periplasmic sensor domain found in signal transduction proteins JK629_03815 PF00672 HAMP domain JK629_03815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_03815 PF00512 His Kinase A (phospho-acceptor) domain JK629_03815 PF01627 Hpt domain JK629_03815 PF00072 Response regulator receiver domain JK629_03820 PF13085 2Fe-2S iron-sulfur cluster binding domain JK629_03830 PF00890 FAD binding domain JK629_03830 PF02910 Fumarate reductase flavoprotein C-term JK629_03865 PF01321 Creatinase/Prolidase N-terminal domain JK629_03865 PF00557 Metallopeptidase family M24 JK629_03870 PF00561 alpha/beta hydrolase fold JK629_03870 PF08386 TAP-like protein JK629_03880 PF00586 AIR synthase related protein, N-terminal domain JK629_03880 PF02769 AIR synthase related protein, C-terminal domain JK629_03900 PF03150 Di-haem cytochrome c peroxidase JK629_03905 PF01521 Iron-sulphur cluster biosynthesis JK629_03910 PF01458 Uncharacterized protein family (UPF0051) JK629_03920 PF00005 ABC transporter JK629_03925 PF01458 Uncharacterized protein family (UPF0051) JK629_03930 PF00266 Aminotransferase class-V JK629_03940 PF02657 Fe-S metabolism associated domain JK629_03945 PF01883 Iron-sulfur cluster assembly protein JK629_03960 PF16360 GTP-binding GTPase Middle Region JK629_03960 PF01926 50S ribosome-binding GTPase JK629_03960 PF13167 GTP-binding GTPase N-terminal JK629_03975 PF01389 OmpA-like transmembrane domain JK629_03975 PF00691 OmpA family JK629_04000 PF00593 TonB dependent receptor JK629_04000 PF07715 TonB-dependent Receptor Plug Domain JK629_04005 PF08460 Bacterial SH3 domain JK629_04005 PF01551 Peptidase family M23 JK629_04015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JK629_04020 PF04209 homogentisate 1,2-dioxygenase JK629_04025 PF01734 Patatin-like phospholipase JK629_04025 PF00027 Cyclic nucleotide-binding domain JK629_04030 PF01541 GIY-YIG catalytic domain JK629_04030 PF02151 UvrB/uvrC motif JK629_04030 PF08459 UvrC Helix-hairpin-helix N-terminal JK629_04040 PF07715 TonB-dependent Receptor Plug Domain JK629_04040 PF00593 TonB dependent receptor JK629_04045 PF08443 RimK-like ATP-grasp domain JK629_04045 PF18030 RimK PreATP-grasp domain JK629_04050 PF18030 RimK PreATP-grasp domain JK629_04050 PF08443 RimK-like ATP-grasp domain JK629_04055 PF18030 RimK PreATP-grasp domain JK629_04055 PF08443 RimK-like ATP-grasp domain JK629_04065 PF01812 5-formyltetrahydrofolate cyclo-ligase family JK629_04080 PF01252 Signal peptidase (SPase) II JK629_04090 PF08264 Anticodon-binding domain of tRNA JK629_04090 PF00133 tRNA synthetases class I (I, L, M and V) JK629_04095 PF00085 Thioredoxin JK629_04095 PF11412 Disulphide bond corrector protein DsbC JK629_04095 PF02683 Cytochrome C biogenesis protein transmembrane region JK629_04145 PF03601 Conserved hypothetical protein 698 JK629_04150 PF05552 Conserved TM helix JK629_04150 PF00924 Mechanosensitive ion channel JK629_04200 PF07995 Glucose / Sorbosone dehydrogenase JK629_04205 PF00171 Aldehyde dehydrogenase family JK629_04210 PF00583 Acetyltransferase (GNAT) family JK629_04215 PF11967 Recombination protein O N terminal JK629_04215 PF02565 Recombination protein O C terminal JK629_04225 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JK629_04225 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JK629_04235 PF00581 Rhodanese-like domain JK629_04235 PF12368 Rhodanase C-terminal JK629_04235 PF17773 UPF0176 acylphosphatase like domain JK629_04240 PF04468 PSP1 C-terminal conserved region JK629_04245 PF14109 GldH lipoprotein JK629_04250 PF00912 Transglycosylase JK629_04250 PF00905 Penicillin binding protein transpeptidase domain JK629_04255 PF01144 Coenzyme A transferase JK629_04260 PF01144 Coenzyme A transferase JK629_04265 PF00005 ABC transporter JK629_04265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JK629_04270 PF01447 Thermolysin metallopeptidase, catalytic domain JK629_04270 PF03413 Peptidase propeptide and YPEB domain JK629_04270 PF02868 Thermolysin metallopeptidase, alpha-helical domain JK629_04270 PF07504 Fungalysin/Thermolysin Propeptide Motif JK629_04290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JK629_04290 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JK629_04295 PF00571 CBS domain JK629_04295 PF01595 Cyclin M transmembrane N-terminal domain JK629_04310 PF00490 Delta-aminolevulinic acid dehydratase JK629_04325 PF01218 Coproporphyrinogen III oxidase JK629_04345 PF01208 Uroporphyrinogen decarboxylase (URO-D) JK629_04350 PF02602 Uroporphyrinogen-III synthase HemD JK629_04350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JK629_04355 PF02080 TrkA-C domain JK629_04355 PF02254 TrkA-N domain JK629_04360 PF02386 Cation transport protein JK629_04365 PF03900 Porphobilinogen deaminase, C-terminal domain JK629_04365 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JK629_04370 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JK629_04370 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JK629_04370 PF01488 Shikimate / quinate 5-dehydrogenase JK629_04385 PF00762 Ferrochelatase JK629_04400 PF03653 Uncharacterised protein family (UPF0093) JK629_04405 PF00672 HAMP domain JK629_04405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_04405 PF00512 His Kinase A (phospho-acceptor) domain JK629_04410 PF00378 Enoyl-CoA hydratase/isomerase JK629_04415 PF00011 Hsp20/alpha crystallin family JK629_04425 PF04055 Radical SAM superfamily JK629_04430 PF01966 HD domain JK629_04445 PF06491 Disulphide isomerase JK629_04450 PF00226 DnaJ domain JK629_04450 PF01556 DnaJ C terminal domain JK629_04450 PF00684 DnaJ central domain JK629_04455 PF00950 ABC 3 transport family JK629_04455 PF02742 Iron dependent repressor, metal binding and dimerisation domain JK629_04460 PF01297 Zinc-uptake complex component A periplasmic JK629_04465 PF00005 ABC transporter JK629_04470 PF00950 ABC 3 transport family JK629_04475 PF00950 ABC 3 transport family JK629_04485 PF07670 Nucleoside recognition JK629_04485 PF02421 Ferrous iron transport protein B JK629_04485 PF07664 Ferrous iron transport protein B C terminus JK629_04495 PF02630 SCO1/SenC JK629_04500 PF11838 ERAP1-like C-terminal domain JK629_04500 PF01433 Peptidase family M1 domain JK629_04505 PF02163 Peptidase family M50 JK629_04505 PF17820 PDZ domain JK629_04540 PF01370 NAD dependent epimerase/dehydratase family JK629_04550 PF01431 Peptidase family M13 JK629_04550 PF05649 Peptidase family M13 JK629_04565 PF00478 IMP dehydrogenase / GMP reductase domain JK629_04565 PF00571 CBS domain JK629_04570 PF06736 Protein of unknown function (DUF1211) JK629_04575 PF00436 Single-strand binding protein family JK629_04580 PF00570 HRDC domain JK629_04580 PF16124 RecQ zinc-binding JK629_04580 PF09382 RQC domain JK629_04580 PF00271 Helicase conserved C-terminal domain JK629_04580 PF00270 DEAD/DEAH box helicase JK629_04590 PF17674 HHH domain JK629_04590 PF00575 S1 RNA binding domain JK629_04590 PF09371 Tex-like protein N-terminal domain JK629_04590 PF16921 Tex protein YqgF-like domain JK629_04600 PF01588 Putative tRNA binding domain JK629_04600 PF08264 Anticodon-binding domain of tRNA JK629_04600 PF09334 tRNA synthetases class I (M) JK629_04605 PF02016 LD-carboxypeptidase N-terminal domain JK629_04605 PF17676 LD-carboxypeptidase C-terminal domain JK629_04610 PF02021 Uncharacterised protein family UPF0102 JK629_04620 PF02559 CarD-like/TRCF domain JK629_04620 PF03461 TRCF domain JK629_04620 PF00271 Helicase conserved C-terminal domain JK629_04620 PF00270 DEAD/DEAH box helicase JK629_04620 PF17757 UvrB interaction domain JK629_04625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JK629_04640 PF08494 DEAD/H associated JK629_04640 PF00270 DEAD/DEAH box helicase JK629_04640 PF00271 Helicase conserved C-terminal domain JK629_04645 PF04679 ATP dependent DNA ligase C terminal region JK629_04645 PF01068 ATP dependent DNA ligase domain JK629_04645 PF04675 DNA ligase N terminus JK629_04660 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JK629_04670 PF00696 Amino acid kinase family JK629_04670 PF01842 ACT domain JK629_04700 PF12681 Glyoxalase-like domain JK629_04705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JK629_04705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JK629_04720 PF00231 ATP synthase JK629_04725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JK629_04725 PF00306 ATP synthase alpha/beta chain, C terminal domain JK629_04725 PF02874 ATP synthase alpha/beta family, beta-barrel domain JK629_04730 PF00213 ATP synthase delta (OSCP) subunit JK629_04735 PF00430 ATP synthase B/B' CF(0) JK629_04740 PF00137 ATP synthase subunit C JK629_04745 PF00119 ATP synthase A chain JK629_04770 PF00175 Oxidoreductase NAD-binding domain JK629_04770 PF00111 2Fe-2S iron-sulfur cluster binding domain JK629_04770 PF00970 Oxidoreductase FAD-binding domain JK629_04785 PF02086 D12 class N6 adenine-specific DNA methyltransferase JK629_04805 PF02844 Phosphoribosylglycinamide synthetase, N domain JK629_04805 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JK629_04805 PF02843 Phosphoribosylglycinamide synthetase, C domain JK629_04815 PF02350 UDP-N-acetylglucosamine 2-epimerase JK629_04825 PF02397 Bacterial sugar transferase JK629_04830 PF01370 NAD dependent epimerase/dehydratase family JK629_04835 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JK629_04835 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JK629_04835 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JK629_04875 PF03102 NeuB family JK629_04875 PF08666 SAF domain JK629_04890 PF04321 RmlD substrate binding domain JK629_04895 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JK629_04900 PF00483 Nucleotidyl transferase JK629_04905 PF16363 GDP-mannose 4,6 dehydratase JK629_04920 PF01476 LysM domain JK629_04920 PF01551 Peptidase family M23 JK629_04925 PF02416 mttA/Hcf106 family JK629_04935 PF00877 NlpC/P60 family JK629_04935 PF01476 LysM domain JK629_04940 PF00162 Phosphoglycerate kinase JK629_04955 PF01134 Glucose inhibited division protein A JK629_04955 PF13932 GidA associated domain JK629_04960 PF02130 Uncharacterized protein family UPF0054 JK629_04970 PF00749 tRNA synthetases class I (E and Q), catalytic domain JK629_05000 PF00749 tRNA synthetases class I (E and Q), catalytic domain JK629_05000 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JK629_05005 PF02152 Dihydroneopterin aldolase JK629_05030 PF17876 Cold shock domain JK629_05030 PF08206 Ribonuclease B OB domain JK629_05030 PF00773 RNB domain JK629_05030 PF00575 S1 RNA binding domain JK629_05040 PF02502 Ribose/Galactose Isomerase JK629_05045 PF01545 Cation efflux family JK629_05045 PF16916 Dimerisation domain of Zinc Transporter JK629_05050 PF13673 Acetyltransferase (GNAT) domain JK629_05060 PF04116 Fatty acid hydroxylase superfamily JK629_05070 PF13180 PDZ domain JK629_05070 PF03572 Peptidase family S41 JK629_05080 PF00825 Ribonuclease P JK629_05090 PF00082 Subtilase family JK629_05095 PF00753 Metallo-beta-lactamase superfamily JK629_05100 PF00999 Sodium/hydrogen exchanger family JK629_05100 PF02080 TrkA-C domain JK629_05100 PF03471 Transporter associated domain JK629_05110 PF00679 Elongation factor G C-terminus JK629_05110 PF00009 Elongation factor Tu GTP binding domain JK629_05110 PF03144 Elongation factor Tu domain 2 JK629_05110 PF06421 GTP-binding protein LepA C-terminus JK629_05120 PF01207 Dihydrouridine synthase (Dus) JK629_05125 PF12704 MacB-like periplasmic core domain JK629_05125 PF02687 FtsX-like permease family JK629_05130 PF02033 Ribosome-binding factor A JK629_05150 PF00677 Lumazine binding domain JK629_05155 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JK629_05165 PF01783 Ribosomal L32p protein family JK629_05170 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JK629_05170 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JK629_05175 PF00364 Biotin-requiring enzyme JK629_05180 PF02785 Biotin carboxylase C-terminal domain JK629_05180 PF00289 Biotin carboxylase, N-terminal domain JK629_05180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JK629_05190 PF00912 Transglycosylase JK629_05205 PF12805 FUSC-like inner membrane protein yccS JK629_05210 PF00107 Zinc-binding dehydrogenase JK629_05210 PF16884 N-terminal domain of oxidoreductase JK629_05215 PF08402 TOBE domain JK629_05215 PF00005 ABC transporter JK629_05230 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JK629_05230 PF01409 tRNA synthetases class II core domain (F) JK629_05245 PF01740 STAS domain JK629_05245 PF00916 Sulfate permease family JK629_05250 PF00484 Carbonic anhydrase JK629_05255 PF00916 Sulfate permease family JK629_05255 PF01740 STAS domain JK629_05280 PF07584 Aerotolerance regulator N-terminal JK629_05280 PF13519 von Willebrand factor type A domain JK629_05285 PF13519 von Willebrand factor type A domain JK629_05285 PF07584 Aerotolerance regulator N-terminal JK629_05295 PF01882 Protein of unknown function DUF58 JK629_05300 PF07726 ATPase family associated with various cellular activities (AAA) JK629_05300 PF17863 AAA lid domain JK629_05310 PF00106 short chain dehydrogenase JK629_05320 PF00149 Calcineurin-like phosphoesterase JK629_05330 PF00171 Aldehyde dehydrogenase family JK629_05335 PF06052 3-hydroxyanthranilic acid dioxygenase JK629_05345 PF01112 Asparaginase JK629_05360 PF06832 Penicillin-Binding Protein C-terminus Family JK629_05360 PF00905 Penicillin binding protein transpeptidase domain JK629_05360 PF00912 Transglycosylase JK629_05370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JK629_05375 PF00873 AcrB/AcrD/AcrF family JK629_05380 PF02321 Outer membrane efflux protein JK629_05390 PF01928 CYTH domain JK629_05400 PF00817 impB/mucB/samB family JK629_05400 PF11799 impB/mucB/samB family C-terminal domain JK629_05410 PF00391 PEP-utilising enzyme, mobile domain JK629_05410 PF00224 Pyruvate kinase, barrel domain JK629_05410 PF02887 Pyruvate kinase, alpha/beta domain JK629_05420 PF00035 Double-stranded RNA binding motif JK629_05420 PF14622 Ribonuclease-III-like JK629_05425 PF00109 Beta-ketoacyl synthase, N-terminal domain JK629_05425 PF02801 Beta-ketoacyl synthase, C-terminal domain JK629_05430 PF00550 Phosphopantetheine attachment site JK629_05435 PF00551 Formyl transferase JK629_05440 PF01693 Caulimovirus viroplasmin JK629_05450 PF00294 pfkB family carbohydrate kinase JK629_05455 PF00156 Phosphoribosyl transferase domain JK629_05460 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JK629_05460 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JK629_05465 PF12705 PD-(D/E)XK nuclease superfamily JK629_05465 PF00580 UvrD/REP helicase N-terminal domain JK629_05465 PF13361 UvrD-like helicase C-terminal domain JK629_05470 PF00155 Aminotransferase class I and II JK629_05475 PF00691 OmpA family JK629_05475 PF00223 Photosystem I psaA/psaB protein JK629_05510 PF01242 6-pyruvoyl tetrahydropterin synthase JK629_05515 PF00149 Calcineurin-like phosphoesterase JK629_05520 PF01368 DHH family JK629_05520 PF02272 DHHA1 domain JK629_05520 PF17768 RecJ OB domain JK629_05520 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JK629_05540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JK629_05555 PF00265 Thymidine kinase JK629_05560 PF00842 Alanine racemase, C-terminal domain JK629_05560 PF01168 Alanine racemase, N-terminal domain JK629_05565 PF01741 Large-conductance mechanosensitive channel, MscL JK629_05570 PF02774 Semialdehyde dehydrogenase, dimerisation domain JK629_05570 PF01118 Semialdehyde dehydrogenase, NAD binding domain JK629_05580 PF00326 Prolyl oligopeptidase family JK629_05580 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JK629_05585 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JK629_05585 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JK629_05590 PF01467 Cytidylyltransferase-like JK629_05595 PF00625 Guanylate kinase JK629_05600 PF08340 Domain of unknown function (DUF1732) JK629_05600 PF03755 YicC-like family, N-terminal region JK629_05605 PF00561 alpha/beta hydrolase fold JK629_05615 PF00892 EamA-like transporter family JK629_05630 PF01053 Cys/Met metabolism PLP-dependent enzyme JK629_05650 PF00154 recA bacterial DNA recombination protein JK629_05670 PF00579 tRNA synthetases class I (W and Y) JK629_05675 PF17782 DprA winged helix domain JK629_05675 PF02481 DNA recombination-mediator protein A JK629_05685 PF03061 Thioesterase superfamily JK629_05690 PF06280 Fn3-like domain JK629_05690 PF02225 PA domain JK629_05690 PF00082 Subtilase family JK629_05710 PF00483 Nucleotidyl transferase JK629_05715 PF00692 dUTPase JK629_05730 PF01769 Divalent cation transporter JK629_05730 PF03448 MgtE intracellular N domain JK629_05730 PF00571 CBS domain JK629_05735 PF00398 Ribosomal RNA adenine dimethylase JK629_05765 PF01914 MarC family integral membrane protein JK629_05775 PF03572 Peptidase family S41 JK629_05775 PF13180 PDZ domain JK629_05850 PF10544 T5orf172 domain JK629_05880 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JK629_05880 PF14572 Phosphoribosyl synthetase-associated domain JK629_05885 PF14693 Ribosomal protein TL5, C-terminal domain JK629_05885 PF01386 Ribosomal L25p family JK629_05890 PF01195 Peptidyl-tRNA hydrolase JK629_05895 PF01687 Riboflavin kinase JK629_05895 PF06574 FAD synthetase JK629_05905 PF02403 Seryl-tRNA synthetase N-terminal domain JK629_05905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JK629_05915 PF03477 ATP cone domain JK629_05915 PF02867 Ribonucleotide reductase, barrel domain JK629_05915 PF00317 Ribonucleotide reductase, all-alpha domain JK629_05960 PF13286 Phosphohydrolase-associated domain JK629_05960 PF01966 HD domain JK629_05970 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JK629_05970 PF02779 Transketolase, pyrimidine binding domain JK629_05970 PF02780 Transketolase, C-terminal domain JK629_05975 PF14437 MafB19-like deaminase JK629_05980 PF00313 'Cold-shock' DNA-binding domain JK629_05990 PF00654 Voltage gated chloride channel JK629_05995 PF01336 OB-fold nucleic acid binding domain JK629_05995 PF02938 GAD domain JK629_05995 PF00152 tRNA synthetases class II (D, K and N) JK629_06000 PF00873 AcrB/AcrD/AcrF family JK629_06005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JK629_06005 PF00529 HlyD membrane-fusion protein of T1SS JK629_06020 PF00348 Polyprenyl synthetase JK629_06025 PF02779 Transketolase, pyrimidine binding domain JK629_06025 PF16870 2-oxoglutarate dehydrogenase C-terminal JK629_06025 PF16078 2-oxoglutarate dehydrogenase N-terminus JK629_06025 PF00676 Dehydrogenase E1 component JK629_06030 PF02817 e3 binding domain JK629_06030 PF00364 Biotin-requiring enzyme JK629_06030 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JK629_06035 PF00196 Bacterial regulatory proteins, luxR family JK629_06035 PF00072 Response regulator receiver domain JK629_06040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_06040 PF07730 Histidine kinase JK629_06050 PF01026 TatD related DNase JK629_06055 PF00710 Asparaginase, N-terminal JK629_06055 PF17763 Glutaminase/Asparaginase C-terminal domain JK629_06065 PF01618 MotA/TolQ/ExbB proton channel family JK629_06095 PF00309 Sigma-54 factor, Activator interacting domain (AID) JK629_06095 PF04963 Sigma-54 factor, core binding domain JK629_06095 PF04552 Sigma-54, DNA binding domain JK629_06100 PF00152 tRNA synthetases class II (D, K and N) JK629_06100 PF01336 OB-fold nucleic acid binding domain JK629_06125 PF01765 Ribosome recycling factor JK629_06130 PF00696 Amino acid kinase family JK629_06140 PF00889 Elongation factor TS JK629_06145 PF00318 Ribosomal protein S2 JK629_06150 PF00380 Ribosomal protein S9/S16 JK629_06155 PF00572 Ribosomal protein L13 JK629_06165 PF01367 5'-3' exonuclease, C-terminal SAM fold JK629_06165 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JK629_06165 PF00476 DNA polymerase family A JK629_06165 PF01612 3'-5' exonuclease JK629_06170 PF01112 Asparaginase JK629_06175 PF03575 Peptidase family S51 JK629_06180 PF08245 Mur ligase middle domain JK629_06180 PF08443 RimK-like ATP-grasp domain JK629_06180 PF02875 Mur ligase family, glutamate ligase domain JK629_06190 PF00085 Thioredoxin JK629_06200 PF01522 Polysaccharide deacetylase JK629_06225 PF01494 FAD binding domain JK629_06230 PF00221 Aromatic amino acid lyase JK629_06245 PF00109 Beta-ketoacyl synthase, N-terminal domain JK629_06245 PF02801 Beta-ketoacyl synthase, C-terminal domain JK629_06250 PF00550 Phosphopantetheine attachment site JK629_06265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JK629_06265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JK629_06270 PF07977 FabA-like domain JK629_06290 PF00005 ABC transporter JK629_06305 PF00109 Beta-ketoacyl synthase, N-terminal domain JK629_06305 PF02801 Beta-ketoacyl synthase, C-terminal domain JK629_06320 PF00550 Phosphopantetheine attachment site JK629_06325 PF00109 Beta-ketoacyl synthase, N-terminal domain JK629_06325 PF02801 Beta-ketoacyl synthase, C-terminal domain JK629_06335 PF01522 Polysaccharide deacetylase JK629_06350 PF07977 FabA-like domain JK629_06370 PF03275 UDP-galactopyranose mutase JK629_06385 PF14535 AMP-binding enzyme C-terminal domain JK629_06385 PF00501 AMP-binding enzyme JK629_06395 PF00582 Universal stress protein family JK629_06400 PF02576 RimP N-terminal domain JK629_06405 PF00575 S1 RNA binding domain JK629_06405 PF13184 NusA-like KH domain JK629_06405 PF08529 NusA N-terminal domain JK629_06410 PF04760 Translation initiation factor IF-2, N-terminal region JK629_06410 PF00009 Elongation factor Tu GTP binding domain JK629_06410 PF11987 Translation-initiation factor 2 JK629_06420 PF00034 Cytochrome c JK629_06425 PF13247 4Fe-4S dicluster domain JK629_06425 PF00037 4Fe-4S binding domain JK629_06430 PF00318 Ribosomal protein S2 JK629_06450 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JK629_06450 PF06481 COX Aromatic Rich Motif JK629_06455 PF00115 Cytochrome C and Quinol oxidase polypeptide I JK629_06460 PF05491 RuvB C-terminal winged helix domain JK629_06460 PF05496 Holliday junction DNA helicase RuvB P-loop domain JK629_06460 PF17864 RuvB AAA lid domain JK629_06465 PF00067 Cytochrome P450 JK629_06470 PF08331 Domain of unknown function (DUF1730) JK629_06475 PF00390 Malic enzyme, N-terminal domain JK629_06475 PF03949 Malic enzyme, NAD binding domain JK629_06475 PF01515 Phosphate acetyl/butaryl transferase JK629_06480 PF07499 RuvA, C-terminal domain JK629_06480 PF01330 RuvA N terminal domain JK629_06490 PF01597 Glycine cleavage H-protein JK629_06520 PF01040 UbiA prenyltransferase family JK629_06525 PF00510 Cytochrome c oxidase subunit III JK629_06530 PF00510 Cytochrome c oxidase subunit III JK629_06545 PF02630 SCO1/SenC JK629_06550 PF04238 Protein of unknown function (DUF420) JK629_06560 PF00005 ABC transporter JK629_06565 PF02687 FtsX-like permease family JK629_06565 PF00005 ABC transporter JK629_06565 PF12704 MacB-like periplasmic core domain JK629_06570 PF00005 ABC transporter JK629_06570 PF02687 FtsX-like permease family JK629_06570 PF12704 MacB-like periplasmic core domain JK629_06580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JK629_06595 PF00814 Glycoprotease family JK629_06605 PF00924 Mechanosensitive ion channel JK629_06605 PF05552 Conserved TM helix JK629_06610 PF03190 Protein of unknown function, DUF255 JK629_06620 PF01106 NifU-like domain JK629_06645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_06645 PF07694 5TMR of 5TMR-LYT JK629_06645 PF13492 GAF domain JK629_06645 PF06580 Histidine kinase JK629_06650 PF00072 Response regulator receiver domain JK629_06650 PF04397 LytTr DNA-binding domain JK629_06655 PF00132 Bacterial transferase hexapeptide (six repeats) JK629_06660 PF01177 Asp/Glu/Hydantoin racemase JK629_06680 PF01255 Putative undecaprenyl diphosphate synthase JK629_06690 PF01513 ATP-NAD kinase JK629_06700 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JK629_06705 PF12697 Alpha/beta hydrolase family JK629_06720 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JK629_06725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JK629_06725 PF05697 Bacterial trigger factor protein (TF) JK629_06725 PF05698 Bacterial trigger factor protein (TF) C-terminus JK629_06730 PF00574 Clp protease JK629_06735 PF06689 ClpX C4-type zinc finger JK629_06735 PF10431 C-terminal, D2-small domain, of ClpB protein JK629_06735 PF07724 AAA domain (Cdc48 subfamily) JK629_06755 PF01712 Deoxynucleoside kinase JK629_06760 PF01479 S4 domain JK629_06760 PF00849 RNA pseudouridylate synthase JK629_06770 PF00491 Arginase family JK629_06775 PF01916 Deoxyhypusine synthase JK629_06780 PF00795 Carbon-nitrogen hydrolase JK629_06780 PF00583 Acetyltransferase (GNAT) family JK629_06795 PF02163 Peptidase family M50 JK629_06795 PF13180 PDZ domain JK629_06800 PF00118 TCP-1/cpn60 chaperonin family JK629_06805 PF00166 Chaperonin 10 Kd subunit JK629_06825 PF00158 Sigma-54 interaction domain JK629_06830 PF00919 Uncharacterized protein family UPF0004 JK629_06830 PF01938 TRAM domain JK629_06830 PF04055 Radical SAM superfamily JK629_06835 PF00719 Inorganic pyrophosphatase JK629_06840 PF13368 Topoisomerase C-terminal repeat JK629_06840 PF01751 Toprim domain JK629_06840 PF01131 DNA topoisomerase JK629_06850 PF03781 Sulfatase-modifying factor enzyme 1 JK629_06870 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JK629_06870 PF01266 FAD dependent oxidoreductase JK629_06880 PF16326 ABC transporter C-terminal domain JK629_06880 PF00005 ABC transporter JK629_06880 PF12848 ABC transporter JK629_06885 PF01734 Patatin-like phospholipase JK629_06925 PF08274 PhnA Zinc-Ribbon JK629_06925 PF03831 PhnA domain JK629_06930 PF00211 Adenylate and Guanylate cyclase catalytic domain JK629_06935 PF00211 Adenylate and Guanylate cyclase catalytic domain JK629_06960 PF02195 ParB-like nuclease domain JK629_06960 PF17762 HTH domain found in ParB protein JK629_07000 PF00436 Single-strand binding protein family JK629_07005 PF00436 Single-strand binding protein family JK629_07035 PF17862 AAA+ lid domain JK629_07035 PF00004 ATPase family associated with various cellular activities (AAA) JK629_07035 PF01434 Peptidase family M41 JK629_07100 PF01022 Bacterial regulatory protein, arsR family JK629_07115 PF00004 ATPase family associated with various cellular activities (AAA) JK629_07145 PF07690 Major Facilitator Superfamily JK629_07165 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JK629_07165 PF14572 Phosphoribosyl synthetase-associated domain JK629_07170 PF02885 Glycosyl transferase family, helical bundle domain JK629_07170 PF00591 Glycosyl transferase family, a/b domain JK629_07170 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JK629_07175 PF00753 Metallo-beta-lactamase superfamily JK629_07175 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JK629_07175 PF10996 Beta-Casp domain JK629_07195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JK629_07195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JK629_07200 PF13194 Domain of unknown function (DUF4010) JK629_07205 PF00365 Phosphofructokinase JK629_07210 PF12697 Alpha/beta hydrolase family JK629_07215 PF01791 DeoC/LacD family aldolase JK629_07230 PF07992 Pyridine nucleotide-disulphide oxidoreductase JK629_07295 PF00873 AcrB/AcrD/AcrF family JK629_07305 PF07732 Multicopper oxidase JK629_07305 PF07731 Multicopper oxidase JK629_07305 PF00394 Multicopper oxidase JK629_07325 PF03773 Predicted permease JK629_07340 PF13533 Biotin-lipoyl like JK629_07355 PF00873 AcrB/AcrD/AcrF family JK629_07360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JK629_07360 PF00529 HlyD membrane-fusion protein of T1SS JK629_07365 PF00543 Nitrogen regulatory protein P-II JK629_07380 PF00403 Heavy-metal-associated domain JK629_07385 PF00403 Heavy-metal-associated domain JK629_07415 PF00282 Pyridoxal-dependent decarboxylase conserved domain JK629_07445 PF00005 ABC transporter JK629_07450 PF01032 FecCD transport family JK629_07455 PF01497 Periplasmic binding protein JK629_07460 PF00593 TonB dependent receptor JK629_07460 PF07715 TonB-dependent Receptor Plug Domain JK629_07460 PF07660 Secretin and TonB N terminus short domain JK629_07470 PF00694 Aconitase C-terminal domain JK629_07470 PF00330 Aconitase family (aconitate hydratase) JK629_07480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JK629_07485 PF00296 Luciferase-like monooxygenase JK629_07490 PF12706 Beta-lactamase superfamily domain JK629_07495 PF13419 Haloacid dehalogenase-like hydrolase JK629_07500 PF01578 Cytochrome C assembly protein JK629_07500 PF05140 ResB-like family JK629_07500 PF01578 Cytochrome C assembly protein JK629_07500 PF05140 ResB-like family JK629_07535 PF01336 OB-fold nucleic acid binding domain JK629_07535 PF00929 Exonuclease JK629_07535 PF02811 PHP domain JK629_07535 PF11490 DNA polymerase III polC-type N-terminus II JK629_07535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JK629_07535 PF07733 Bacterial DNA polymerase III alpha NTPase domain JK629_07535 PF14579 Helix-hairpin-helix motif JK629_07595 PF00593 TonB dependent receptor JK629_07595 PF07715 TonB-dependent Receptor Plug Domain JK629_07605 PF07693 KAP family P-loop domain JK629_07620 PF01026 TatD related DNase JK629_07655 PF00145 C-5 cytosine-specific DNA methylase JK629_07660 PF09561 HpaII restriction endonuclease JK629_07665 PF00440 Bacterial regulatory proteins, tetR family JK629_07675 PF00892 EamA-like transporter family JK629_07690 PF12867 DinB superfamily JK629_07715 PF00144 Beta-lactamase JK629_07725 PF04397 LytTr DNA-binding domain JK629_07725 PF00072 Response regulator receiver domain JK629_07730 PF06580 Histidine kinase JK629_07730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_07730 PF07694 5TMR of 5TMR-LYT JK629_07740 PF00557 Metallopeptidase family M24 JK629_07740 PF05195 Aminopeptidase P, N-terminal domain JK629_07780 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH JK629_07805 PF00665 Integrase core domain JK629_07805 PF13333 Integrase core domain JK629_07805 PF13276 HTH-like domain JK629_07815 PF01872 RibD C-terminal domain JK629_07850 PF00881 Nitroreductase family JK629_07890 PF13673 Acetyltransferase (GNAT) domain JK629_07905 PF13732 Domain of unknown function (DUF4162) JK629_07905 PF00005 ABC transporter JK629_07910 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase JK629_07925 PF00072 Response regulator receiver domain JK629_07925 PF04397 LytTr DNA-binding domain JK629_07930 PF07694 5TMR of 5TMR-LYT JK629_07930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_07930 PF06580 Histidine kinase JK629_07950 PF08446 PAS fold JK629_07950 PF00512 His Kinase A (phospho-acceptor) domain JK629_07950 PF00360 Phytochrome region JK629_07950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_07950 PF01590 GAF domain JK629_07955 PF01339 CheB methylesterase JK629_07955 PF00072 Response regulator receiver domain JK629_07975 PF02805 Metal binding domain of Ada JK629_07975 PF12833 Helix-turn-helix domain JK629_07990 PF13280 WYL domain JK629_07990 PF08279 HTH domain JK629_07995 PF01554 MatE JK629_08000 PF00719 Inorganic pyrophosphatase JK629_08005 PF03030 Inorganic H+ pyrophosphatase JK629_08010 PF13194 Domain of unknown function (DUF4010) JK629_08020 PF13089 Polyphosphate kinase N-terminal domain JK629_08020 PF02503 Polyphosphate kinase middle domain JK629_08020 PF13090 Polyphosphate kinase C-terminal domain 2 JK629_08020 PF17941 Polyphosphate kinase C-terminal domain 1 JK629_08025 PF01712 Deoxynucleoside kinase JK629_08060 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JK629_08070 PF00970 Oxidoreductase FAD-binding domain JK629_08070 PF00111 2Fe-2S iron-sulfur cluster binding domain JK629_08070 PF00175 Oxidoreductase NAD-binding domain JK629_08075 PF05138 Phenylacetic acid catabolic protein JK629_08085 PF06243 Phenylacetic acid degradation B JK629_08095 PF05138 Phenylacetic acid catabolic protein JK629_08100 PF01883 Iron-sulfur cluster assembly protein JK629_08105 PF00378 Enoyl-CoA hydratase/isomerase JK629_08110 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JK629_08110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JK629_08110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JK629_08125 PF04228 Putative neutral zinc metallopeptidase JK629_08130 PF02803 Thiolase, C-terminal domain JK629_08130 PF00108 Thiolase, N-terminal domain JK629_08135 PF01575 MaoC like domain JK629_08135 PF00171 Aldehyde dehydrogenase family JK629_08150 PF00132 Bacterial transferase hexapeptide (six repeats) JK629_08155 PF02817 e3 binding domain JK629_08155 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JK629_08155 PF00364 Biotin-requiring enzyme JK629_08160 PF02779 Transketolase, pyrimidine binding domain JK629_08160 PF02780 Transketolase, C-terminal domain JK629_08180 PF01175 Urocanase Rossmann-like domain JK629_08180 PF17392 Urocanase C-terminal domain JK629_08180 PF17391 Urocanase N-terminal domain JK629_08190 PF07650 KH domain JK629_08190 PF01926 50S ribosome-binding GTPase JK629_08200 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JK629_08200 PF01926 50S ribosome-binding GTPase JK629_08220 PF04011 LemA family JK629_08230 PF08460 Bacterial SH3 domain JK629_08230 PF01551 Peptidase family M23 JK629_08235 PF02272 DHHA1 domain JK629_08235 PF01411 tRNA synthetases class II (A) JK629_08235 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JK629_08255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_08255 PF07730 Histidine kinase JK629_08260 PF00196 Bacterial regulatory proteins, luxR family JK629_08260 PF00072 Response regulator receiver domain JK629_08265 PF02773 S-adenosylmethionine synthetase, C-terminal domain JK629_08265 PF02772 S-adenosylmethionine synthetase, central domain JK629_08265 PF00438 S-adenosylmethionine synthetase, N-terminal domain JK629_08270 PF01053 Cys/Met metabolism PLP-dependent enzyme JK629_08275 PF00742 Homoserine dehydrogenase JK629_08275 PF00696 Amino acid kinase family JK629_08275 PF03447 Homoserine dehydrogenase, NAD binding domain JK629_08285 PF02965 Vitamin B12 dependent methionine synthase, activation domain JK629_08285 PF00809 Pterin binding enzyme JK629_08285 PF02574 Homocysteine S-methyltransferase JK629_08285 PF02310 B12 binding domain JK629_08285 PF02607 B12 binding domain JK629_08290 PF00291 Pyridoxal-phosphate dependent enzyme JK629_08295 PF02310 B12 binding domain JK629_08295 PF02965 Vitamin B12 dependent methionine synthase, activation domain JK629_08295 PF00809 Pterin binding enzyme JK629_08295 PF02574 Homocysteine S-methyltransferase JK629_08295 PF02607 B12 binding domain JK629_08300 PF02219 Methylenetetrahydrofolate reductase JK629_08325 PF00005 ABC transporter JK629_08330 PF18152 DAHP synthase ferredoxin-like domain JK629_08330 PF00793 DAHP synthetase I family JK629_08340 PF16745 RsgA N-terminal domain JK629_08340 PF03193 RsgA GTPase JK629_08345 PF02580 D-Tyr-tRNA(Tyr) deacylase JK629_08360 PF03819 MazG nucleotide pyrophosphohydrolase domain JK629_08370 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JK629_08375 PF02547 Queuosine biosynthesis protein JK629_08380 PF01483 Proprotein convertase P-domain JK629_08385 PF04055 Radical SAM superfamily JK629_08390 PF10365 Domain of unknown function (DUF2436) JK629_08390 PF03785 Peptidase family C25, C terminal ig-like domain JK629_08390 PF08126 Propeptide_C25 JK629_08390 PF07675 Cleaved Adhesin Domain JK629_08390 PF01364 Peptidase family C25 JK629_08395 PF00348 Polyprenyl synthetase JK629_08415 PF10410 DnaB-helicase binding domain of primase JK629_08415 PF08275 DNA primase catalytic core, N-terminal domain JK629_08415 PF01807 CHC2 zinc finger JK629_08420 PF00072 Response regulator receiver domain JK629_08420 PF00196 Bacterial regulatory proteins, luxR family JK629_08425 PF02540 NAD synthase JK629_08440 PF01926 50S ribosome-binding GTPase JK629_08445 PF00561 alpha/beta hydrolase fold JK629_08450 PF02381 MraZ protein, putative antitoxin-like JK629_08455 PF01795 MraW methylase family JK629_08465 PF03793 PASTA domain JK629_08465 PF03717 Penicillin-binding Protein dimerisation domain JK629_08465 PF00905 Penicillin binding protein transpeptidase domain JK629_08470 PF08245 Mur ligase middle domain JK629_08470 PF01225 Mur ligase family, catalytic domain JK629_08470 PF02875 Mur ligase family, glutamate ligase domain JK629_08475 PF00953 Glycosyl transferase family 4 JK629_08475 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JK629_08480 PF02875 Mur ligase family, glutamate ligase domain JK629_08480 PF08245 Mur ligase middle domain JK629_08485 PF01098 Cell cycle protein JK629_08490 PF04101 Glycosyltransferase family 28 C-terminal domain JK629_08490 PF03033 Glycosyltransferase family 28 N-terminal domain JK629_08495 PF01225 Mur ligase family, catalytic domain JK629_08495 PF02875 Mur ligase family, glutamate ligase domain JK629_08495 PF08245 Mur ligase middle domain JK629_08505 PF02491 SHS2 domain inserted in FTSA JK629_08510 PF12327 FtsZ family, C-terminal domain JK629_08510 PF00091 Tubulin/FtsZ family, GTPase domain JK629_08515 PF09424 Yqey-like protein JK629_08535 PF04002 RadC-like JAB domain JK629_08545 PF13419 Haloacid dehalogenase-like hydrolase JK629_08565 PF16193 AAA C-terminal domain JK629_08565 PF12002 MgsA AAA+ ATPase C terminal JK629_08565 PF00004 ATPase family associated with various cellular activities (AAA) JK629_08575 PF00588 SpoU rRNA Methylase family JK629_08575 PF08032 RNA 2'-O ribose methyltransferase substrate binding JK629_08590 PF07715 TonB-dependent Receptor Plug Domain JK629_08590 PF00593 TonB dependent receptor JK629_08600 PF00164 Ribosomal protein S12/S23 JK629_08605 PF00177 Ribosomal protein S7p/S5e JK629_08610 PF00679 Elongation factor G C-terminus JK629_08610 PF03764 Elongation factor G, domain IV JK629_08610 PF00009 Elongation factor Tu GTP binding domain JK629_08610 PF03144 Elongation factor Tu domain 2 JK629_08610 PF14492 Elongation Factor G, domain II JK629_08615 PF00338 Ribosomal protein S10p/S20e JK629_08620 PF00297 Ribosomal protein L3 JK629_08625 PF00573 Ribosomal protein L4/L1 family JK629_08630 PF00276 Ribosomal protein L23 JK629_08635 PF00181 Ribosomal Proteins L2, RNA binding domain JK629_08635 PF03947 Ribosomal Proteins L2, C-terminal domain JK629_08640 PF00203 Ribosomal protein S19 JK629_08645 PF00237 Ribosomal protein L22p/L17e JK629_08650 PF07650 KH domain JK629_08650 PF00189 Ribosomal protein S3, C-terminal domain JK629_08655 PF00252 Ribosomal protein L16p/L10e JK629_08660 PF00831 Ribosomal L29 protein JK629_08665 PF00366 Ribosomal protein S17 JK629_08670 PF00238 Ribosomal protein L14p/L23e JK629_08675 PF00467 KOW motif JK629_08675 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JK629_08680 PF00281 Ribosomal protein L5 JK629_08680 PF00673 ribosomal L5P family C-terminus JK629_08685 PF00253 Ribosomal protein S14p/S29e JK629_08690 PF00410 Ribosomal protein S8 JK629_08695 PF00347 Ribosomal protein L6 JK629_08700 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JK629_08705 PF00333 Ribosomal protein S5, N-terminal domain JK629_08705 PF03719 Ribosomal protein S5, C-terminal domain JK629_08710 PF00327 Ribosomal protein L30p/L7e JK629_08715 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JK629_08720 PF00344 SecY translocase JK629_08725 PF01176 Translation initiation factor 1A / IF-1 JK629_08730 PF00444 Ribosomal protein L36 JK629_08735 PF00416 Ribosomal protein S13/S18 JK629_08740 PF00411 Ribosomal protein S11 JK629_08745 PF00163 Ribosomal protein S4/S9 N-terminal domain JK629_08745 PF01479 S4 domain JK629_08750 PF01000 RNA polymerase Rpb3/RpoA insert domain JK629_08750 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JK629_08750 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JK629_08755 PF01196 Ribosomal protein L17 JK629_08760 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JK629_08760 PF00117 Glutamine amidotransferase class-I JK629_08765 PF00113 Enolase, C-terminal TIM barrel domain JK629_08765 PF03952 Enolase, N-terminal domain JK629_08770 PF00285 Citrate synthase, C-terminal domain JK629_08780 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JK629_08780 PF00326 Prolyl oligopeptidase family JK629_08785 PF00854 POT family JK629_08790 PF00854 POT family JK629_08800 PF03772 Competence protein JK629_08800 PF13567 Domain of unknown function (DUF4131) JK629_08800 PF00753 Metallo-beta-lactamase superfamily JK629_08805 PF00877 NlpC/P60 family JK629_08810 PF02684 Lipid-A-disaccharide synthetase JK629_08815 PF01820 D-ala D-ala ligase N-terminus JK629_08815 PF07478 D-ala D-ala ligase C-terminus JK629_08825 PF01479 S4 domain JK629_08825 PF00849 RNA pseudouridylate synthase JK629_08835 PF01839 FG-GAP repeat JK629_08835 PF18370 Rhamnogalacturonan I lyases beta-sheet domain JK629_08845 PF10459 Peptidase S46 JK629_08850 PF05661 Protein of unknown function (DUF808) JK629_08865 PF07715 TonB-dependent Receptor Plug Domain JK629_08865 PF00593 TonB dependent receptor JK629_08875 PF00005 ABC transporter JK629_08875 PF16326 ABC transporter C-terminal domain JK629_08875 PF12848 ABC transporter JK629_08880 PF01566 Natural resistance-associated macrophage protein JK629_08880 PF03358 NADPH-dependent FMN reductase JK629_08890 PF08000 Bacterial PH domain JK629_08905 PF03471 Transporter associated domain JK629_08905 PF02080 TrkA-C domain JK629_08905 PF00999 Sodium/hydrogen exchanger family JK629_08925 PF03883 Peroxide stress protein YaaA JK629_08940 PF01432 Peptidase family M3 JK629_08950 PF10459 Peptidase S46 JK629_08960 PF03449 Transcription elongation factor, N-terminal JK629_08960 PF01272 Transcription elongation factor, GreA/GreB, C-term JK629_09000 PF04542 Sigma-70 region 2 JK629_09000 PF08281 Sigma-70, region 4 JK629_09015 PF02735 Ku70/Ku80 beta-barrel domain JK629_09020 PF04679 ATP dependent DNA ligase C terminal region JK629_09020 PF01068 ATP dependent DNA ligase domain JK629_09020 PF13298 DNA polymerase Ligase (LigD) JK629_09030 PF02308 MgtC family JK629_09040 PF04193 PQ loop repeat JK629_09050 PF05974 Domain of unknown function (DUF892) JK629_09095 PF00106 short chain dehydrogenase JK629_09130 PF02698 DUF218 domain JK629_09135 PF06123 Inner membrane protein CreD JK629_09155 PF00793 DAHP synthetase I family JK629_09160 PF00679 Elongation factor G C-terminus JK629_09160 PF14492 Elongation Factor G, domain II JK629_09160 PF00009 Elongation factor Tu GTP binding domain JK629_09160 PF03144 Elongation factor Tu domain 2 JK629_09185 PF00535 Glycosyl transferase family 2 JK629_09210 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JK629_09240 PF13439 Glycosyltransferase Family 4 JK629_09240 PF00534 Glycosyl transferases group 1 JK629_09245 PF05523 WxcM-like, C-terminal JK629_09250 PF00535 Glycosyl transferase family 2 JK629_09270 PF00005 ABC transporter JK629_09295 PF07969 Amidohydrolase family JK629_09305 PF07075 Protein of unknown function (DUF1343) JK629_09310 PF12704 MacB-like periplasmic core domain JK629_09310 PF02687 FtsX-like permease family JK629_09315 PF00291 Pyridoxal-phosphate dependent enzyme JK629_09315 PF00571 CBS domain JK629_09330 PF07885 Ion channel JK629_09330 PF02254 TrkA-N domain JK629_09335 PF01235 Sodium:alanine symporter family JK629_09340 PF10531 SLBB domain JK629_09345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JK629_09345 PF02770 Acyl-CoA dehydrogenase, middle domain JK629_09345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JK629_09355 PF01165 Ribosomal protein S21 JK629_09360 PF02899 Phage integrase, N-terminal SAM-like domain JK629_09360 PF00589 Phage integrase family JK629_09365 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JK629_09365 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JK629_09390 PF03143 Elongation factor Tu C-terminal domain JK629_09390 PF03144 Elongation factor Tu domain 2 JK629_09390 PF00009 Elongation factor Tu GTP binding domain JK629_09400 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JK629_09405 PF02357 Transcription termination factor nusG JK629_09405 PF00467 KOW motif JK629_09410 PF03946 Ribosomal protein L11, N-terminal domain JK629_09410 PF00298 Ribosomal protein L11, RNA binding domain JK629_09415 PF00687 Ribosomal protein L1p/L10e family JK629_09420 PF00466 Ribosomal protein L10 JK629_09425 PF00542 Ribosomal protein L7/L12 C-terminal domain JK629_09425 PF16320 Ribosomal protein L7/L12 dimerisation domain JK629_09430 PF04563 RNA polymerase beta subunit JK629_09430 PF04561 RNA polymerase Rpb2, domain 2 JK629_09430 PF04565 RNA polymerase Rpb2, domain 3 JK629_09430 PF10385 RNA polymerase beta subunit external 1 domain JK629_09430 PF04560 RNA polymerase Rpb2, domain 7 JK629_09430 PF00562 RNA polymerase Rpb2, domain 6 JK629_09435 PF04997 RNA polymerase Rpb1, domain 1 JK629_09435 PF00623 RNA polymerase Rpb1, domain 2 JK629_09435 PF04983 RNA polymerase Rpb1, domain 3 JK629_09435 PF05000 RNA polymerase Rpb1, domain 4 JK629_09435 PF04998 RNA polymerase Rpb1, domain 5 JK629_09445 PF03144 Elongation factor Tu domain 2 JK629_09445 PF16658 Class II release factor RF3, C-terminal domain JK629_09445 PF00009 Elongation factor Tu GTP binding domain JK629_09460 PF00691 OmpA family JK629_09460 PF00223 Photosystem I psaA/psaB protein JK629_09465 PF00293 NUDIX domain JK629_09475 PF01238 Phosphomannose isomerase type I JK629_09495 PF12146 Serine aminopeptidase, S33 JK629_09510 PF00082 Subtilase family JK629_09510 PF01483 Proprotein convertase P-domain JK629_09515 PF00183 Hsp90 protein JK629_09525 PF03109 ABC1 family JK629_09530 PF00326 Prolyl oligopeptidase family JK629_09530 PF07676 WD40-like Beta Propeller Repeat JK629_09530 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JK629_09535 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JK629_09535 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JK629_09550 PF00474 Sodium:solute symporter family JK629_09560 PF02132 RecR protein JK629_09560 PF13662 Toprim domain JK629_09570 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JK629_09570 PF00364 Biotin-requiring enzyme JK629_09570 PF02817 e3 binding domain JK629_09575 PF00929 Exonuclease JK629_09580 PF01557 Fumarylacetoacetate (FAA) hydrolase family JK629_09590 PF18146 Damage-inducible protein CinA KH domain JK629_09590 PF00994 Probable molybdopterin binding domain JK629_09590 PF02464 Competence-damaged protein JK629_09595 PF00830 Ribosomal L28 family JK629_09600 PF00471 Ribosomal protein L33 JK629_09610 PF02881 SRP54-type protein, helical bundle domain JK629_09610 PF00448 SRP54-type protein, GTPase domain JK629_09615 PF07676 WD40-like Beta Propeller Repeat JK629_09615 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JK629_09615 PF00326 Prolyl oligopeptidase family JK629_09620 PF04055 Radical SAM superfamily JK629_09620 PF18693 TRAM domain JK629_09620 PF00919 Uncharacterized protein family UPF0004 JK629_09655 PF13495 Phage integrase, N-terminal SAM-like domain JK629_09655 PF00589 Phage integrase family JK629_09685 PF00654 Voltage gated chloride channel JK629_09735 PF00271 Helicase conserved C-terminal domain JK629_09735 PF04851 Type III restriction enzyme, res subunit JK629_09735 PF12344 Ultra-violet resistance protein B JK629_09735 PF17757 UvrB interaction domain JK629_09750 PF01479 S4 domain JK629_09750 PF00849 RNA pseudouridylate synthase JK629_09755 PF00011 Hsp20/alpha crystallin family JK629_09760 PF10011 Predicted membrane protein (DUF2254) JK629_09770 PF00549 CoA-ligase JK629_09770 PF08442 ATP-grasp domain JK629_09775 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JK629_09775 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JK629_09780 PF00313 'Cold-shock' DNA-binding domain JK629_09785 PF01483 Proprotein convertase P-domain JK629_09785 PF04389 Peptidase family M28 JK629_09790 PF03060 Nitronate monooxygenase JK629_09795 PF00082 Subtilase family JK629_09810 PF02096 60Kd inner membrane protein JK629_09810 PF14849 YidC periplasmic domain JK629_09815 PF00117 Glutamine amidotransferase class-I JK629_09815 PF06418 CTP synthase N-terminus JK629_09825 PF12843 Putative quorum-sensing-regulated virulence factor JK629_09840 PF05257 CHAP domain JK629_09840 PF01476 LysM domain JK629_09845 PF00958 GMP synthase C terminal domain JK629_09845 PF02540 NAD synthase JK629_09845 PF00117 Glutamine amidotransferase class-I JK629_09850 PF10079 Bacillithiol biosynthesis BshC JK629_09870 PF04011 LemA family JK629_09880 PF12034 Domain of unknown function (DUF3520) JK629_09880 PF00092 von Willebrand factor type A domain JK629_09880 PF12450 von Willebrand factor JK629_09895 PF00005 ABC transporter JK629_09910 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JK629_09915 PF12867 DinB superfamily JK629_09930 PF01588 Putative tRNA binding domain JK629_09950 PF00916 Sulfate permease family JK629_09950 PF01740 STAS domain JK629_09965 PF00664 ABC transporter transmembrane region JK629_09965 PF00005 ABC transporter JK629_09970 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JK629_09970 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JK629_09975 PF01029 NusB family JK629_09985 PF02699 Preprotein translocase subunit JK629_09990 PF01546 Peptidase family M20/M25/M40 JK629_09990 PF07687 Peptidase dimerisation domain JK629_09995 PF01180 Dihydroorotate dehydrogenase JK629_10000 PF01810 LysE type translocator JK629_10005 PF00682 HMGL-like JK629_10010 PF02872 5'-nucleotidase, C-terminal domain JK629_10010 PF00149 Calcineurin-like phosphoesterase JK629_10040 PF00571 CBS domain JK629_10040 PF00478 IMP dehydrogenase / GMP reductase domain JK629_10055 PF00639 PPIC-type PPIASE domain JK629_10055 PF09312 SurA N-terminal domain JK629_10065 PF09312 SurA N-terminal domain JK629_10065 PF00639 PPIC-type PPIASE domain JK629_10070 PF07726 ATPase family associated with various cellular activities (AAA) JK629_10070 PF17863 AAA lid domain JK629_10075 PF00694 Aconitase C-terminal domain JK629_10075 PF00330 Aconitase family (aconitate hydratase) JK629_10080 PF00578 AhpC/TSA family JK629_10105 PF01593 Flavin containing amine oxidoreductase JK629_10125 PF01202 Shikimate kinase JK629_10130 PF00156 Phosphoribosyl transferase domain JK629_10135 PF01479 S4 domain JK629_10145 PF02780 Transketolase, C-terminal domain JK629_10145 PF02779 Transketolase, pyrimidine binding domain JK629_10150 PF02780 Transketolase, C-terminal domain JK629_10150 PF00456 Transketolase, thiamine diphosphate binding domain JK629_10150 PF02779 Transketolase, pyrimidine binding domain JK629_10155 PF01702 Queuine tRNA-ribosyltransferase JK629_10170 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JK629_10175 PF03796 DnaB-like helicase C terminal domain JK629_10175 PF00772 DnaB-like helicase N terminal domain JK629_10185 PF00691 OmpA family JK629_10190 PF00453 Ribosomal protein L20 JK629_10195 PF01632 Ribosomal protein L35 JK629_10200 PF00707 Translation initiation factor IF-3, C-terminal domain JK629_10200 PF05198 Translation initiation factor IF-3, N-terminal domain JK629_10205 PF03129 Anticodon binding domain JK629_10205 PF02824 TGS domain JK629_10205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JK629_10205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JK629_10235 PF13580 SIS domain JK629_10250 PF03971 Monomeric isocitrate dehydrogenase JK629_10255 PF01245 Ribosomal protein L19 JK629_10260 PF01746 tRNA (Guanine-1)-methyltransferase JK629_10295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JK629_10295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JK629_10300 PF13180 PDZ domain JK629_10300 PF17820 PDZ domain JK629_10305 PF01678 Diaminopimelate epimerase JK629_10315 PF02618 YceG-like family JK629_10320 PF02225 PA domain JK629_10320 PF04389 Peptidase family M28 JK629_10330 PF00753 Metallo-beta-lactamase superfamily JK629_10330 PF00581 Rhodanese-like domain JK629_10345 PF03275 UDP-galactopyranose mutase JK629_10370 PF02146 Sir2 family JK629_10375 PF00588 SpoU rRNA Methylase family JK629_10385 PF01725 Ham1 family JK629_10390 PF00271 Helicase conserved C-terminal domain JK629_10390 PF03880 DbpA RNA binding domain JK629_10390 PF00270 DEAD/DEAH box helicase JK629_10405 PF00171 Aldehyde dehydrogenase family JK629_10430 PF13614 AAA domain JK629_10435 PF17762 HTH domain found in ParB protein JK629_10435 PF02195 ParB-like nuclease domain JK629_10445 PF05173 Dihydrodipicolinate reductase, C-terminus JK629_10445 PF01113 Dihydrodipicolinate reductase, N-terminus JK629_10450 PF10502 Signal peptidase, peptidase S26 JK629_10455 PF07995 Glucose / Sorbosone dehydrogenase JK629_10465 PF00289 Biotin carboxylase, N-terminal domain JK629_10465 PF02785 Biotin carboxylase C-terminal domain JK629_10465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JK629_10470 PF01039 Carboxyl transferase domain JK629_10475 PF01925 Sulfite exporter TauE/SafE JK629_10480 PF00689 Cation transporting ATPase, C-terminus JK629_10480 PF00690 Cation transporter/ATPase, N-terminus JK629_10500 PF02405 Permease MlaE JK629_10505 PF00005 ABC transporter JK629_10530 PF16123 Hydroxyacylglutathione hydrolase C-terminus JK629_10530 PF00753 Metallo-beta-lactamase superfamily JK629_10555 PF00873 AcrB/AcrD/AcrF family JK629_10565 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JK629_10570 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JK629_10570 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JK629_10580 PF00248 Aldo/keto reductase family JK629_10585 PF00196 Bacterial regulatory proteins, luxR family JK629_10605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JK629_10610 PF00873 AcrB/AcrD/AcrF family JK629_10630 PF00582 Universal stress protein family JK629_10635 PF01048 Phosphorylase superfamily JK629_10640 PF01791 DeoC/LacD family aldolase JK629_10645 PF00085 Thioredoxin JK629_10660 PF13493 Domain of unknown function (DUF4118) JK629_10660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_10660 PF00512 His Kinase A (phospho-acceptor) domain JK629_10660 PF02702 Osmosensitive K+ channel His kinase sensor domain JK629_10665 PF00072 Response regulator receiver domain JK629_10665 PF00486 Transcriptional regulatory protein, C terminal JK629_10700 PF10996 Beta-Casp domain JK629_10700 PF00753 Metallo-beta-lactamase superfamily JK629_10700 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JK629_10740 PF02469 Fasciclin domain JK629_10745 PF13473 Cupredoxin-like domain JK629_10745 PF18793 Nitrous oxide reductase propeller repeat 2 JK629_10745 PF18764 Nitrous oxide reductase propeller repeat JK629_10765 PF00005 ABC transporter JK629_10765 PF13732 Domain of unknown function (DUF4162) JK629_10790 PF02445 Quinolinate synthetase A protein JK629_10795 PF00890 FAD binding domain JK629_10795 PF02910 Fumarate reductase flavoprotein C-term JK629_10805 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JK629_10805 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JK629_10820 PF01814 Hemerythrin HHE cation binding domain JK629_10820 PF04405 Domain of Unknown function (DUF542) JK629_10830 PF00403 Heavy-metal-associated domain JK629_10840 PF00115 Cytochrome C and Quinol oxidase polypeptide I JK629_10850 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JK629_10850 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JK629_10855 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JK629_10855 PF13746 4Fe-4S dicluster domain JK629_10855 PF12801 4Fe-4S binding domain JK629_10885 PF03781 Sulfatase-modifying factor enzyme 1 JK629_10890 PF07732 Multicopper oxidase JK629_10900 PF06969 HemN C-terminal domain JK629_10900 PF04055 Radical SAM superfamily JK629_10910 PF07992 Pyridine nucleotide-disulphide oxidoreductase JK629_10955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JK629_10955 PF03466 LysR substrate binding domain JK629_10965 PF07726 ATPase family associated with various cellular activities (AAA) JK629_10965 PF17863 AAA lid domain JK629_10995 PF03458 UPF0126 domain JK629_11000 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JK629_11025 PF07992 Pyridine nucleotide-disulphide oxidoreductase JK629_11035 PF00211 Adenylate and Guanylate cyclase catalytic domain JK629_11050 PF13443 Cro/C1-type HTH DNA-binding domain JK629_11065 PF07694 5TMR of 5TMR-LYT JK629_11065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_11065 PF06580 Histidine kinase JK629_11085 PF00072 Response regulator receiver domain JK629_11085 PF04397 LytTr DNA-binding domain JK629_11130 PF04715 Anthranilate synthase component I, N terminal region JK629_11130 PF00425 chorismate binding enzyme JK629_11130 PF00117 Glutamine amidotransferase class-I JK629_11145 PF01171 PP-loop family JK629_11150 PF00365 Phosphofructokinase JK629_11155 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JK629_11155 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JK629_11165 PF00342 Phosphoglucose isomerase JK629_11170 PF01078 Magnesium chelatase, subunit ChlI JK629_11170 PF13335 Magnesium chelatase, subunit ChlI C-terminal JK629_11175 PF00675 Insulinase (Peptidase family M16) JK629_11175 PF05193 Peptidase M16 inactive domain JK629_11205 PF00672 HAMP domain JK629_11205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_11205 PF07730 Histidine kinase JK629_11210 PF00196 Bacterial regulatory proteins, luxR family JK629_11210 PF00072 Response regulator receiver domain JK629_11215 PF00849 RNA pseudouridylate synthase JK629_11220 PF02548 Ketopantoate hydroxymethyltransferase JK629_11230 PF03313 Serine dehydratase alpha chain JK629_11230 PF03315 Serine dehydratase beta chain JK629_11240 PF11799 impB/mucB/samB family C-terminal domain JK629_11240 PF13438 Domain of unknown function (DUF4113) JK629_11240 PF00817 impB/mucB/samB family JK629_11255 PF00012 Hsp70 protein JK629_11275 PF03061 Thioesterase superfamily JK629_11280 PF00425 chorismate binding enzyme JK629_11285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JK629_11285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JK629_11295 PF17783 CvfB-like winged helix domain JK629_11295 PF13509 S1 domain JK629_11310 PF00378 Enoyl-CoA hydratase/isomerase JK629_11325 PF13537 Glutamine amidotransferase domain JK629_11325 PF00733 Asparagine synthase JK629_11335 PF02780 Transketolase, C-terminal domain JK629_11335 PF02779 Transketolase, pyrimidine binding domain JK629_11355 PF03641 Possible lysine decarboxylase JK629_11360 PF17755 UvrA DNA-binding domain JK629_11360 PF17760 UvrA interaction domain JK629_11375 PF04336 Acyl carrier protein phosphodiesterase JK629_11385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JK629_11385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JK629_11385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JK629_11385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JK629_11405 PF01694 Rhomboid family JK629_11415 PF00578 AhpC/TSA family JK629_11440 PF00210 Ferritin-like domain JK629_11450 PF00459 Inositol monophosphatase family JK629_11470 PF01507 Phosphoadenosine phosphosulfate reductase family JK629_11480 PF00009 Elongation factor Tu GTP binding domain JK629_11495 PF01943 Polysaccharide biosynthesis protein JK629_11510 PF00535 Glycosyl transferase family 2 JK629_11525 PF00534 Glycosyl transferases group 1 JK629_11525 PF13439 Glycosyltransferase Family 4 JK629_11535 PF02397 Bacterial sugar transferase JK629_11600 PF02661 Fic/DOC family JK629_11600 PF13784 Fic/DOC family N-terminal JK629_11645 PF00072 Response regulator receiver domain JK629_11645 PF01339 CheB methylesterase JK629_11720 PF00266 Aminotransferase class-V JK629_11735 PF02463 RecF/RecN/SMC N terminal domain JK629_11760 PF13361 UvrD-like helicase C-terminal domain JK629_11760 PF00580 UvrD/REP helicase N-terminal domain JK629_11760 PF12705 PD-(D/E)XK nuclease superfamily JK629_11765 PF13175 AAA ATPase domain JK629_11785 PF00593 TonB dependent receptor JK629_11785 PF07715 TonB-dependent Receptor Plug Domain JK629_11840 PF11799 impB/mucB/samB family C-terminal domain JK629_11840 PF11798 IMS family HHH motif JK629_11840 PF00817 impB/mucB/samB family JK629_11845 PF07733 Bacterial DNA polymerase III alpha NTPase domain JK629_11845 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JK629_11845 PF14579 Helix-hairpin-helix motif JK629_11845 PF02811 PHP domain JK629_11860 PF07730 Histidine kinase JK629_11860 PF05384 Sensor protein DegS JK629_11860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_11885 PF02397 Bacterial sugar transferase JK629_11890 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JK629_11895 PF02719 Polysaccharide biosynthesis protein JK629_11900 PF02563 Polysaccharide biosynthesis/export protein JK629_11900 PF10531 SLBB domain JK629_11900 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JK629_11905 PF13614 AAA domain JK629_11915 PF03099 Biotin/lipoate A/B protein ligase family JK629_11915 PF10437 Bacterial lipoate protein ligase C-terminus JK629_11930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JK629_11935 PF12833 Helix-turn-helix domain JK629_11935 PF02311 AraC-like ligand binding domain JK629_11940 PF04264 YceI-like domain JK629_11955 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JK629_11960 PF07681 DoxX JK629_11970 PF10396 GTP-binding protein TrmE N-terminus JK629_11970 PF01926 50S ribosome-binding GTPase JK629_11970 PF12631 MnmE helical domain JK629_11980 PF00712 DNA polymerase III beta subunit, N-terminal domain JK629_11980 PF02767 DNA polymerase III beta subunit, central domain JK629_11980 PF02768 DNA polymerase III beta subunit, C-terminal domain JK629_12005 PF02562 PhoH-like protein JK629_12010 PF01259 SAICAR synthetase JK629_12025 PF01235 Sodium:alanine symporter family JK629_12035 PF03062 MBOAT, membrane-bound O-acyltransferase family JK629_12040 PF05343 M42 glutamyl aminopeptidase JK629_12090 PF01170 Putative RNA methylase family UPF0020 JK629_12090 PF02926 THUMP domain JK629_12090 PF10672 S-adenosylmethionine-dependent methyltransferase JK629_12105 PF01938 TRAM domain JK629_12105 PF05958 tRNA (Uracil-5-)-methyltransferase JK629_12110 PF00202 Aminotransferase class-III JK629_12140 PF00266 Aminotransferase class-V JK629_12150 PF01551 Peptidase family M23 JK629_12170 PF00013 KH domain JK629_12170 PF01966 HD domain JK629_12170 PF12072 Domain of unknown function (DUF3552) JK629_12175 PF00248 Aldo/keto reductase family JK629_12180 PF02899 Phage integrase, N-terminal SAM-like domain JK629_12180 PF00589 Phage integrase family JK629_12205 PF01220 Dehydroquinase class II JK629_12210 PF07992 Pyridine nucleotide-disulphide oxidoreductase JK629_12210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JK629_12215 PF01641 SelR domain JK629_12220 PF01641 SelR domain JK629_12235 PF11700 Vacuole effluxer Atg22 like JK629_12250 PF00004 ATPase family associated with various cellular activities (AAA) JK629_12250 PF05362 Lon protease (S16) C-terminal proteolytic domain JK629_12250 PF02190 ATP-dependent protease La (LON) substrate-binding domain JK629_12260 PF02224 Cytidylate kinase JK629_12265 PF01741 Large-conductance mechanosensitive channel, MscL JK629_12270 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JK629_12270 PF00072 Response regulator receiver domain JK629_12270 PF01627 Hpt domain JK629_12270 PF00672 HAMP domain JK629_12270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_12270 PF00512 His Kinase A (phospho-acceptor) domain JK629_12290 PF01037 Lrp/AsnC ligand binding domain JK629_12300 PF03631 Virulence factor BrkB JK629_12305 PF01965 DJ-1/PfpI family JK629_12315 PF01761 3-dehydroquinate synthase JK629_12320 PF01619 Proline dehydrogenase JK629_12330 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JK629_12330 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JK629_12350 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JK629_12355 PF02954 Bacterial regulatory protein, Fis family JK629_12355 PF00158 Sigma-54 interaction domain JK629_12355 PF00072 Response regulator receiver domain JK629_12360 PF01966 HD domain JK629_12365 PF00132 Bacterial transferase hexapeptide (six repeats) JK629_12365 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JK629_12370 PF07977 FabA-like domain JK629_12370 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JK629_12375 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JK629_12375 PF00132 Bacterial transferase hexapeptide (six repeats) JK629_12380 PF01132 Elongation factor P (EF-P) OB domain JK629_12380 PF08207 Elongation factor P (EF-P) KOW-like domain JK629_12380 PF09285 Elongation factor P, C-terminal JK629_12385 PF00132 Bacterial transferase hexapeptide (six repeats) JK629_12385 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JK629_12395 PF02629 CoA binding domain JK629_12395 PF00549 CoA-ligase JK629_12415 PF00474 Sodium:solute symporter family JK629_12420 PF01634 ATP phosphoribosyltransferase JK629_12420 PF08029 HisG, C-terminal domain JK629_12425 PF00815 Histidinol dehydrogenase JK629_12430 PF00155 Aminotransferase class I and II JK629_12435 PF00475 Imidazoleglycerol-phosphate dehydratase JK629_12440 PF00117 Glutamine amidotransferase class-I JK629_12445 PF00977 Histidine biosynthesis protein JK629_12455 PF00977 Histidine biosynthesis protein JK629_12460 PF01502 Phosphoribosyl-AMP cyclohydrolase JK629_12460 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JK629_12465 PF01544 CorA-like Mg2+ transporter protein JK629_12470 PF13472 GDSL-like Lipase/Acylhydrolase family JK629_12475 PF00005 ABC transporter JK629_12480 PF00005 ABC transporter JK629_12480 PF12704 MacB-like periplasmic core domain JK629_12480 PF02687 FtsX-like permease family JK629_12490 PF00487 Fatty acid desaturase JK629_12495 PF00313 'Cold-shock' DNA-binding domain JK629_12525 PF09335 SNARE associated Golgi protein JK629_12540 PF00199 Catalase JK629_12540 PF06628 Catalase-related immune-responsive JK629_12540 PF18011 C-terminal domain found in long catalases JK629_12620 PF00005 ABC transporter JK629_12635 PF02627 Carboxymuconolactone decarboxylase family JK629_12655 PF00391 PEP-utilising enzyme, mobile domain JK629_12655 PF02896 PEP-utilising enzyme, TIM barrel domain JK629_12655 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JK629_12660 PF00072 Response regulator receiver domain JK629_12660 PF00486 Transcriptional regulatory protein, C terminal JK629_12665 PF00672 HAMP domain JK629_12665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_12665 PF00512 His Kinase A (phospho-acceptor) domain JK629_12675 PF00011 Hsp20/alpha crystallin family JK629_12690 PF01734 Patatin-like phospholipase JK629_12690 PF00027 Cyclic nucleotide-binding domain JK629_12710 PF07715 TonB-dependent Receptor Plug Domain JK629_12710 PF07660 Secretin and TonB N terminus short domain JK629_12710 PF00593 TonB dependent receptor JK629_12720 PF00211 Adenylate and Guanylate cyclase catalytic domain JK629_12725 PF01979 Amidohydrolase family JK629_12750 PF01226 Formate/nitrite transporter JK629_12765 PF00881 Nitroreductase family JK629_12770 PF03741 Integral membrane protein TerC family JK629_12790 PF00550 Phosphopantetheine attachment site JK629_12795 PF00109 Beta-ketoacyl synthase, N-terminal domain JK629_12795 PF02801 Beta-ketoacyl synthase, C-terminal domain JK629_12800 PF07977 FabA-like domain JK629_12810 PF00195 Chalcone and stilbene synthases, N-terminal domain JK629_12810 PF02797 Chalcone and stilbene synthases, C-terminal domain JK629_12815 PF13649 Methyltransferase domain JK629_12825 PF00691 OmpA family JK629_12825 PF05736 OprF membrane domain JK629_12840 PF02780 Transketolase, C-terminal domain JK629_12840 PF02779 Transketolase, pyrimidine binding domain JK629_12855 PF01048 Phosphorylase superfamily JK629_12865 PF03167 Uracil DNA glycosylase superfamily JK629_12870 PF00488 MutS domain V JK629_12870 PF01713 Smr domain JK629_12875 PF04134 Protein of unknown function, DUF393 JK629_12885 PF00375 Sodium:dicarboxylate symporter family JK629_12890 PF01264 Chorismate synthase JK629_12900 PF02913 FAD linked oxidases, C-terminal domain JK629_12900 PF13183 4Fe-4S dicluster domain JK629_12900 PF01565 FAD binding domain JK629_12910 PF13439 Glycosyltransferase Family 4 JK629_12910 PF00534 Glycosyl transferases group 1 JK629_12915 PF00933 Glycosyl hydrolase family 3 N terminal domain JK629_12915 PF01915 Glycosyl hydrolase family 3 C-terminal domain JK629_12925 PF13183 4Fe-4S dicluster domain JK629_12925 PF02665 Nitrate reductase gamma subunit JK629_12925 PF02754 Cysteine-rich domain JK629_12935 PF02754 Cysteine-rich domain JK629_12935 PF13183 4Fe-4S dicluster domain JK629_12940 PF02470 MlaD protein JK629_12945 PF01520 N-acetylmuramoyl-L-alanine amidase JK629_12945 PF11741 AMIN domain JK629_12955 PF01042 Endoribonuclease L-PSP JK629_12965 PF00814 Glycoprotease family JK629_12970 PF04452 RNA methyltransferase JK629_12980 PF01594 AI-2E family transporter JK629_13005 PF07697 7TM-HD extracellular JK629_13005 PF01966 HD domain JK629_13005 PF07698 7TM receptor with intracellular HD hydrolase JK629_13010 PF02803 Thiolase, C-terminal domain JK629_13010 PF00108 Thiolase, N-terminal domain JK629_13015 PF00877 NlpC/P60 family JK629_13020 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) JK629_13020 PF13181 Tetratricopeptide repeat JK629_13025 PF03989 DNA gyrase C-terminal domain, beta-propeller JK629_13025 PF00521 DNA gyrase/topoisomerase IV, subunit A JK629_13030 PF00004 ATPase family associated with various cellular activities (AAA) JK629_13030 PF17871 AAA lid domain JK629_13030 PF02861 Clp amino terminal domain, pathogenicity island component JK629_13030 PF10431 C-terminal, D2-small domain, of ClpB protein JK629_13030 PF07724 AAA domain (Cdc48 subfamily) JK629_13045 PF00221 Aromatic amino acid lyase JK629_13050 PF01256 Carbohydrate kinase JK629_13075 PF00196 Bacterial regulatory proteins, luxR family JK629_13075 PF00072 Response regulator receiver domain JK629_13080 PF05231 MASE1 JK629_13080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_13080 PF07730 Histidine kinase JK629_13090 PF00892 EamA-like transporter family JK629_13095 PF00270 DEAD/DEAH box helicase JK629_13095 PF00271 Helicase conserved C-terminal domain JK629_13100 PF02559 CarD-like/TRCF domain JK629_13100 PF00270 DEAD/DEAH box helicase JK629_13100 PF00271 Helicase conserved C-terminal domain JK629_13100 PF03461 TRCF domain JK629_13100 PF17757 UvrB interaction domain JK629_13105 PF09905 DNA-binding protein VF530 JK629_13115 PF03764 Elongation factor G, domain IV JK629_13115 PF14492 Elongation Factor G, domain II JK629_13115 PF03144 Elongation factor Tu domain 2 JK629_13115 PF00009 Elongation factor Tu GTP binding domain JK629_13115 PF00679 Elongation factor G C-terminus JK629_13125 PF00313 'Cold-shock' DNA-binding domain JK629_13130 PF01625 Peptide methionine sulfoxide reductase JK629_13150 PF04264 YceI-like domain JK629_13155 PF05726 Pirin C-terminal cupin domain JK629_13155 PF02678 Pirin JK629_13160 PF02678 Pirin JK629_13160 PF05726 Pirin C-terminal cupin domain JK629_13210 PF04545 Sigma-70, region 4 JK629_13210 PF04539 Sigma-70 region 3 JK629_13210 PF04542 Sigma-70 region 2 JK629_13210 PF00140 Sigma-70 factor, region 1.2 JK629_13210 PF03979 Sigma-70 factor, region 1.1 JK629_13215 PF03600 Citrate transporter JK629_13215 PF02080 TrkA-C domain JK629_13220 PF00924 Mechanosensitive ion channel JK629_13220 PF05552 Conserved TM helix JK629_13235 PF00106 short chain dehydrogenase JK629_13245 PF00924 Mechanosensitive ion channel JK629_13245 PF12795 Mechanosensitive ion channel porin domain JK629_13245 PF12794 Mechanosensitive ion channel inner membrane domain 1 JK629_13250 PF12823 Domain of unknown function (DUF3817) JK629_13255 PF00924 Mechanosensitive ion channel JK629_13280 PF00171 Aldehyde dehydrogenase family JK629_13285 PF08669 Glycine cleavage T-protein C-terminal barrel domain JK629_13285 PF01571 Aminomethyltransferase folate-binding domain JK629_13290 PF04960 Glutaminase JK629_13300 PF01329 Pterin 4 alpha carbinolamine dehydratase JK629_13305 PF01709 Transcriptional regulator JK629_13320 PF00465 Iron-containing alcohol dehydrogenase JK629_13330 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JK629_13330 PF13538 UvrD-like helicase C-terminal domain JK629_13330 PF14490 Helix-hairpin-helix containing domain JK629_13360 PF12169 DNA polymerase III subunits gamma and tau domain III JK629_13390 PF13089 Polyphosphate kinase N-terminal domain JK629_13390 PF17941 Polyphosphate kinase C-terminal domain 1 JK629_13390 PF13090 Polyphosphate kinase C-terminal domain 2 JK629_13390 PF02503 Polyphosphate kinase middle domain JK629_13400 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JK629_13400 PF01243 Pyridoxamine 5'-phosphate oxidase JK629_13405 PF12706 Beta-lactamase superfamily domain JK629_13415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JK629_13415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JK629_13420 PF00156 Phosphoribosyl transferase domain JK629_13425 PF00575 S1 RNA binding domain JK629_13430 PF00521 DNA gyrase/topoisomerase IV, subunit A JK629_13435 PF00204 DNA gyrase B JK629_13435 PF00986 DNA gyrase B subunit, carboxyl terminus JK629_13435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_13435 PF01751 Toprim domain JK629_13440 PF00226 DnaJ domain JK629_13440 PF01556 DnaJ C terminal domain JK629_13440 PF00684 DnaJ central domain JK629_13455 PF01926 50S ribosome-binding GTPase JK629_13455 PF06071 Protein of unknown function (DUF933) JK629_13475 PF00037 4Fe-4S binding domain JK629_13485 PF00266 Aminotransferase class-V JK629_13490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JK629_13490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JK629_13510 PF00593 TonB dependent receptor JK629_13510 PF07715 TonB-dependent Receptor Plug Domain JK629_13520 PF01227 GTP cyclohydrolase I JK629_13525 PF00005 ABC transporter JK629_13535 PF00072 Response regulator receiver domain JK629_13535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_13535 PF00512 His Kinase A (phospho-acceptor) domain JK629_13535 PF09308 LuxQ, periplasmic JK629_13550 PF01979 Amidohydrolase family JK629_13575 PF00753 Metallo-beta-lactamase superfamily JK629_13585 PF00578 AhpC/TSA family JK629_13590 PF00730 HhH-GPD superfamily base excision DNA repair protein JK629_13590 PF00633 Helix-hairpin-helix motif JK629_13590 PF10576 Iron-sulfur binding domain of endonuclease III JK629_13605 PF17755 UvrA DNA-binding domain JK629_13605 PF17760 UvrA interaction domain JK629_13605 PF00005 ABC transporter JK629_13640 PF00155 Aminotransferase class I and II JK629_13645 PF00291 Pyridoxal-phosphate dependent enzyme JK629_13645 PF00571 CBS domain JK629_13650 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JK629_13650 PF00326 Prolyl oligopeptidase family JK629_13655 PF02575 YbaB/EbfC DNA-binding family JK629_13660 PF07411 Domain of unknown function (DUF1508) JK629_13665 PF01212 Beta-eliminating lyase JK629_13715 PF03960 ArsC family JK629_13720 PF00593 TonB dependent receptor JK629_13720 PF07715 TonB-dependent Receptor Plug Domain JK629_13730 PF00206 Lyase JK629_13730 PF10415 Fumarase C C-terminus JK629_13735 PF01578 Cytochrome C assembly protein JK629_13735 PF05140 ResB-like family JK629_13770 PF02545 Maf-like protein JK629_13800 PF01189 16S rRNA methyltransferase RsmB/F JK629_13800 PF01029 NusB family JK629_13815 PF02769 AIR synthase related protein, C-terminal domain JK629_13815 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JK629_13815 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JK629_13855 PF08534 Redoxin JK629_13915 PF00501 AMP-binding enzyme JK629_13925 PF00893 Small Multidrug Resistance protein JK629_13930 PF01047 MarR family JK629_13935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JK629_13935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JK629_13935 PF00378 Enoyl-CoA hydratase/isomerase JK629_13945 PF02803 Thiolase, C-terminal domain JK629_13945 PF00108 Thiolase, N-terminal domain JK629_13955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JK629_13955 PF02770 Acyl-CoA dehydrogenase, middle domain JK629_13955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JK629_13965 PF04151 Bacterial pre-peptidase C-terminal domain JK629_13965 PF04389 Peptidase family M28 JK629_13980 PF01979 Amidohydrolase family JK629_13985 PF02469 Fasciclin domain JK629_13990 PF01476 LysM domain JK629_13990 PF04972 BON domain JK629_14015 PF00326 Prolyl oligopeptidase family JK629_14025 PF00781 Diacylglycerol kinase catalytic domain JK629_14050 PF07992 Pyridine nucleotide-disulphide oxidoreductase JK629_14050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JK629_14055 PF01053 Cys/Met metabolism PLP-dependent enzyme JK629_14075 PF03553 Na+/H+ antiporter family JK629_14080 PF10417 C-terminal domain of 1-Cys peroxiredoxin JK629_14080 PF00578 AhpC/TSA family JK629_14085 PF00085 Thioredoxin JK629_14095 PF08534 Redoxin JK629_14115 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JK629_14115 PF01580 FtsK/SpoIIIE family JK629_14115 PF09397 Ftsk gamma domain JK629_14115 PF17854 FtsK alpha domain JK629_14130 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JK629_14130 PF00925 GTP cyclohydrolase II JK629_14135 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JK629_14150 PF02899 Phage integrase, N-terminal SAM-like domain JK629_14150 PF00589 Phage integrase family JK629_14190 PF13676 TIR domain JK629_14210 PF17092 Penicillin-binding protein OB-like domain JK629_14210 PF00912 Transglycosylase JK629_14210 PF00905 Penicillin binding protein transpeptidase domain JK629_14235 PF07715 TonB-dependent Receptor Plug Domain JK629_14235 PF00593 TonB dependent receptor JK629_14245 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JK629_14245 PF07676 WD40-like Beta Propeller Repeat JK629_14245 PF00326 Prolyl oligopeptidase family JK629_14260 PF12833 Helix-turn-helix domain JK629_14270 PF00155 Aminotransferase class I and II JK629_14305 PF01520 N-acetylmuramoyl-L-alanine amidase JK629_14385 PF13749 Putative ATP-dependent DNA helicase recG C-terminal JK629_14385 PF17191 RecG wedge domain JK629_14385 PF00270 DEAD/DEAH box helicase JK629_14415 PF00436 Single-strand binding protein family JK629_14445 PF00482 Type II secretion system (T2SS), protein F JK629_14460 PF00437 Type II/IV secretion system protein JK629_14460 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JK629_14560 PF16177 Acetyl-coenzyme A synthetase N-terminus JK629_14560 PF00501 AMP-binding enzyme JK629_14560 PF13193 AMP-binding enzyme C-terminal domain JK629_14570 PF10114 Sensory domain found in PocR JK629_14570 PF12833 Helix-turn-helix domain JK629_14580 PF08328 Adenylosuccinate lyase C-terminal JK629_14580 PF00206 Lyase JK629_14600 PF04542 Sigma-70 region 2 JK629_14600 PF08281 Sigma-70, region 4 JK629_14625 PF01032 FecCD transport family JK629_14630 PF00005 ABC transporter JK629_14635 PF02646 RmuC family JK629_14650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JK629_14650 PF02142 MGS-like domain JK629_14650 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JK629_14655 PF00468 Ribosomal protein L34 JK629_14685 PF00919 Uncharacterized protein family UPF0004 JK629_14685 PF01938 TRAM domain JK629_14685 PF04055 Radical SAM superfamily JK629_14690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JK629_14705 PF01197 Ribosomal protein L31 JK629_14715 PF00535 Glycosyl transferase family 2 JK629_14720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JK629_14720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JK629_14720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JK629_14720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JK629_14725 PF00005 ABC transporter JK629_14725 PF00664 ABC transporter transmembrane region JK629_14730 PF08281 Sigma-70, region 4 JK629_14730 PF04542 Sigma-70 region 2 JK629_14760 PF03441 FAD binding domain of DNA photolyase JK629_14760 PF00875 DNA photolyase JK629_14775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JK629_14785 PF04359 Protein of unknown function (DUF493) JK629_14795 PF00270 DEAD/DEAH box helicase JK629_14795 PF00271 Helicase conserved C-terminal domain JK629_14795 PF00570 HRDC domain JK629_14795 PF16124 RecQ zinc-binding JK629_14795 PF09382 RQC domain JK629_14800 PF00551 Formyl transferase JK629_14800 PF02911 Formyl transferase, C-terminal domain JK629_14805 PF00216 Bacterial DNA-binding protein JK629_14810 PF02622 Uncharacterized ACR, COG1678 JK629_14845 PF03129 Anticodon binding domain JK629_14845 PF13393 Histidyl-tRNA synthetase JK629_14850 PF02687 FtsX-like permease family JK629_14850 PF12704 MacB-like periplasmic core domain JK629_14860 PF03948 Ribosomal protein L9, C-terminal domain JK629_14860 PF01281 Ribosomal protein L9, N-terminal domain JK629_14865 PF01084 Ribosomal protein S18 JK629_14870 PF01250 Ribosomal protein S6 JK629_14875 PF04397 LytTr DNA-binding domain JK629_14875 PF00072 Response regulator receiver domain JK629_14880 PF00271 Helicase conserved C-terminal domain JK629_14880 PF17764 3′ DNA-binding domain (3′BD) JK629_14880 PF18074 Primosomal protein N C-terminal domain JK629_14880 PF04851 Type III restriction enzyme, res subunit JK629_14880 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JK629_14890 PF03631 Virulence factor BrkB JK629_14895 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JK629_14895 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JK629_14900 PF02590 Predicted SPOUT methyltransferase JK629_14930 PF01642 Methylmalonyl-CoA mutase JK629_14930 PF02310 B12 binding domain JK629_14940 PF01642 Methylmalonyl-CoA mutase JK629_14950 PF00485 Phosphoribulokinase / Uridine kinase family JK629_14975 PF08676 MutL C terminal dimerisation domain JK629_14975 PF01119 DNA mismatch repair protein, C-terminal domain JK629_14985 PF00885 6,7-dimethyl-8-ribityllumazine synthase JK629_14995 PF02463 RecF/RecN/SMC N terminal domain JK629_15010 PF00334 Nucleoside diphosphate kinase JK629_15015 PF02272 DHHA1 domain JK629_15015 PF01368 DHH family JK629_15025 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JK629_15030 PF07687 Peptidase dimerisation domain JK629_15030 PF01546 Peptidase family M20/M25/M40 JK629_15065 PF08032 RNA 2'-O ribose methyltransferase substrate binding JK629_15065 PF00588 SpoU rRNA Methylase family JK629_15070 PF01435 Peptidase family M48 JK629_15090 PF03147 Ferredoxin-fold anticodon binding domain JK629_15090 PF01588 Putative tRNA binding domain JK629_15090 PF03483 B3/4 domain JK629_15090 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JK629_15090 PF03484 tRNA synthetase B5 domain JK629_15095 PF02469 Fasciclin domain JK629_15120 PF12848 ABC transporter JK629_15120 PF00005 ABC transporter JK629_15130 PF00923 Transaldolase/Fructose-6-phosphate aldolase JK629_15135 PF00106 short chain dehydrogenase JK629_15150 PF07715 TonB-dependent Receptor Plug Domain JK629_15150 PF00593 TonB dependent receptor JK629_15165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JK629_15175 PF00464 Serine hydroxymethyltransferase JK629_15195 PF17871 AAA lid domain JK629_15195 PF00004 ATPase family associated with various cellular activities (AAA) JK629_15195 PF02861 Clp amino terminal domain, pathogenicity island component JK629_15195 PF10431 C-terminal, D2-small domain, of ClpB protein JK629_15195 PF07724 AAA domain (Cdc48 subfamily) JK629_15230 PF05532 CsbD-like JK629_15240 PF01668 SmpB protein JK629_15260 PF13302 Acetyltransferase (GNAT) domain JK629_15275 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JK629_15275 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JK629_15285 PF01168 Alanine racemase, N-terminal domain JK629_15290 PF01336 OB-fold nucleic acid binding domain JK629_15290 PF11490 DNA polymerase III polC-type N-terminus II JK629_15290 PF07733 Bacterial DNA polymerase III alpha NTPase domain JK629_15290 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JK629_15290 PF14579 Helix-hairpin-helix motif JK629_15290 PF02811 PHP domain JK629_15290 PF00929 Exonuclease JK629_15295 PF00520 Ion transport protein JK629_15295 PF00027 Cyclic nucleotide-binding domain JK629_15305 PF00072 Response regulator receiver domain JK629_15305 PF00486 Transcriptional regulatory protein, C terminal JK629_15310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JK629_15310 PF00512 His Kinase A (phospho-acceptor) domain JK629_15315 PF01121 Dephospho-CoA kinase JK629_15325 PF00535 Glycosyl transferase family 2 JK629_15350 PF02463 RecF/RecN/SMC N terminal domain JK629_15360 PF04127 DNA / pantothenate metabolism flavoprotein JK629_15360 PF02441 Flavoprotein JK629_15375 PF00701 Dihydrodipicolinate synthetase family JK629_15385 PF03120 NAD-dependent DNA ligase OB-fold domain JK629_15385 PF01653 NAD-dependent DNA ligase adenylation domain JK629_15385 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JK629_15385 PF00533 BRCA1 C Terminus (BRCT) domain JK629_15385 PF12826 Helix-hairpin-helix motif JK629_15390 PF00230 Major intrinsic protein JK629_15395 PF03641 Possible lysine decarboxylase JK629_15400 PF05175 Methyltransferase small domain JK629_15400 PF17827 PrmC N-terminal domain JK629_15405 PF00583 Acetyltransferase (GNAT) family JK629_15410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JK629_15410 PF01872 RibD C-terminal domain JK629_15420 PF09186 Domain of unknown function (DUF1949) JK629_15420 PF01205 Uncharacterized protein family UPF0029