locus-tag class description EI546_00010 PF01165 Ribosomal protein S21 EI546_00015 PF02899 Phage integrase, N-terminal SAM-like domain EI546_00015 PF00589 Phage integrase family EI546_00020 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus EI546_00020 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EI546_00045 PF03143 Elongation factor Tu C-terminal domain EI546_00045 PF03144 Elongation factor Tu domain 2 EI546_00045 PF00009 Elongation factor Tu GTP binding domain EI546_00055 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EI546_00060 PF00467 KOW motif EI546_00060 PF02357 Transcription termination factor nusG EI546_00065 PF03946 Ribosomal protein L11, N-terminal domain EI546_00065 PF00298 Ribosomal protein L11, RNA binding domain EI546_00070 PF00687 Ribosomal protein L1p/L10e family EI546_00075 PF00466 Ribosomal protein L10 EI546_00080 PF00542 Ribosomal protein L7/L12 C-terminal domain EI546_00080 PF16320 Ribosomal protein L7/L12 dimerisation domain EI546_00085 PF04563 RNA polymerase beta subunit EI546_00085 PF04561 RNA polymerase Rpb2, domain 2 EI546_00085 PF04565 RNA polymerase Rpb2, domain 3 EI546_00085 PF10385 RNA polymerase beta subunit external 1 domain EI546_00085 PF04560 RNA polymerase Rpb2, domain 7 EI546_00085 PF00562 RNA polymerase Rpb2, domain 6 EI546_00090 PF04997 RNA polymerase Rpb1, domain 1 EI546_00090 PF05000 RNA polymerase Rpb1, domain 4 EI546_00090 PF04983 RNA polymerase Rpb1, domain 3 EI546_00090 PF04998 RNA polymerase Rpb1, domain 5 EI546_00090 PF00623 RNA polymerase Rpb1, domain 2 EI546_00100 PF03466 LysR substrate binding domain EI546_00100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EI546_00110 PF07726 ATPase family associated with various cellular activities (AAA) EI546_00110 PF17863 AAA lid domain EI546_00115 PF00665 Integrase core domain EI546_00115 PF13276 HTH-like domain EI546_00145 PF04011 LemA family EI546_00155 PF06418 CTP synthase N-terminus EI546_00155 PF00117 Glutamine amidotransferase class-I EI546_00160 PF02096 60Kd inner membrane protein EI546_00160 PF14849 YidC periplasmic domain EI546_00175 PF00082 Subtilase family EI546_00180 PF03060 Nitronate monooxygenase EI546_00190 PF00313 'Cold-shock' DNA-binding domain EI546_00195 PF08442 ATP-grasp domain EI546_00195 PF00549 CoA-ligase EI546_00205 PF10011 Predicted membrane protein (DUF2254) EI546_00210 PF00011 Hsp20/alpha crystallin family EI546_00215 PF01479 S4 domain EI546_00215 PF00849 RNA pseudouridylate synthase EI546_00230 PF17757 UvrB interaction domain EI546_00230 PF00271 Helicase conserved C-terminal domain EI546_00230 PF12344 Ultra-violet resistance protein B EI546_00230 PF04851 Type III restriction enzyme, res subunit EI546_00240 PF02698 DUF218 domain EI546_00255 PF00005 ABC transporter EI546_00260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EI546_00275 PF01588 Putative tRNA binding domain EI546_00305 PF00005 ABC transporter EI546_00305 PF00664 ABC transporter transmembrane region EI546_00310 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EI546_00310 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EI546_00315 PF01029 NusB family EI546_00325 PF02699 Preprotein translocase subunit EI546_00330 PF01243 Pyridoxamine 5'-phosphate oxidase EI546_00330 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EI546_00335 PF00171 Aldehyde dehydrogenase family EI546_00340 PF01042 Endoribonuclease L-PSP EI546_00345 PF01494 FAD binding domain EI546_00350 PF00266 Aminotransferase class-V EI546_00370 PF01625 Peptide methionine sulfoxide reductase EI546_00380 PF01784 NIF3 (NGG1p interacting factor 3) EI546_00385 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EI546_00390 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EI546_00390 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EI546_00395 PF04055 Radical SAM superfamily EI546_00400 PF04542 Sigma-70 region 2 EI546_00400 PF08281 Sigma-70, region 4 EI546_00405 PF00535 Glycosyl transferase family 2 EI546_00420 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EI546_00420 PF01565 FAD binding domain EI546_00425 PF00155 Aminotransferase class I and II EI546_00430 PF13180 PDZ domain EI546_00440 PF08264 Anticodon-binding domain of tRNA EI546_00440 PF00133 tRNA synthetases class I (I, L, M and V) EI546_00440 PF10458 Valyl tRNA synthetase tRNA binding arm EI546_00450 PF02666 Phosphatidylserine decarboxylase EI546_00465 PF00004 ATPase family associated with various cellular activities (AAA) EI546_00465 PF17862 AAA+ lid domain EI546_00465 PF01434 Peptidase family M41 EI546_00475 PF03309 Type III pantothenate kinase EI546_00475 PF03099 Biotin/lipoate A/B protein ligase family EI546_00475 PF02237 Biotin protein ligase C terminal domain EI546_00485 PF00156 Phosphoribosyl transferase domain EI546_00490 PF00293 NUDIX domain EI546_00500 PF07497 Rho termination factor, RNA-binding domain EI546_00500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EI546_00515 PF01416 tRNA pseudouridine synthase EI546_00520 PF00664 ABC transporter transmembrane region EI546_00520 PF00005 ABC transporter EI546_00525 PF02457 DisA bacterial checkpoint controller nucleotide-binding EI546_00530 PF00809 Pterin binding enzyme EI546_00550 PF00121 Triosephosphate isomerase EI546_00570 PF00156 Phosphoribosyl transferase domain EI546_00580 PF09905 DNA-binding protein VF530 EI546_00590 PF00270 DEAD/DEAH box helicase EI546_00590 PF00271 Helicase conserved C-terminal domain EI546_00595 PF00892 EamA-like transporter family EI546_00600 PF00107 Zinc-binding dehydrogenase EI546_00600 PF08240 Alcohol dehydrogenase GroES-like domain EI546_00610 PF01544 CorA-like Mg2+ transporter protein EI546_00615 PF04679 ATP dependent DNA ligase C terminal region EI546_00615 PF01068 ATP dependent DNA ligase domain EI546_00615 PF13298 DNA polymerase Ligase (LigD) EI546_00625 PF13298 DNA polymerase Ligase (LigD) EI546_00625 PF04679 ATP dependent DNA ligase C terminal region EI546_00625 PF01068 ATP dependent DNA ligase domain EI546_00655 PF01609 Transposase DDE domain EI546_00705 PF13180 PDZ domain EI546_00730 PF01337 Barstar (barnase inhibitor) EI546_00790 PF13509 S1 domain EI546_00790 PF17783 CvfB-like winged helix domain EI546_00795 PF00080 Copper/zinc superoxide dismutase (SODC) EI546_00795 PF13627 Prokaryotic lipoprotein-attachment site EI546_00835 PF07969 Amidohydrolase family EI546_00850 PF08241 Methyltransferase domain EI546_00860 PF10415 Fumarase C C-terminus EI546_00860 PF00206 Lyase EI546_00870 PF00270 DEAD/DEAH box helicase EI546_00870 PF17191 RecG wedge domain EI546_00870 PF00271 Helicase conserved C-terminal domain EI546_00875 PF09113 Peptide-N-glycosidase F, C terminal EI546_00875 PF09112 Peptide-N-glycosidase F, N terminal EI546_00880 PF11838 ERAP1-like C-terminal domain EI546_00880 PF01433 Peptidase family M1 domain EI546_00895 PF01645 Conserved region in glutamate synthase EI546_00900 PF00270 DEAD/DEAH box helicase EI546_00900 PF03880 DbpA RNA binding domain EI546_00900 PF00271 Helicase conserved C-terminal domain EI546_00925 PF00005 ABC transporter EI546_00925 PF17755 UvrA DNA-binding domain EI546_00925 PF17760 UvrA interaction domain EI546_00930 PF13361 UvrD-like helicase C-terminal domain EI546_00930 PF00580 UvrD/REP helicase N-terminal domain EI546_00935 PF01300 Telomere recombination EI546_00950 PF00535 Glycosyl transferase family 2 EI546_00970 PF01040 UbiA prenyltransferase family EI546_00980 PF13378 Enolase C-terminal domain-like EI546_00980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EI546_01005 PF00535 Glycosyl transferase family 2 EI546_01015 PF01121 Dephospho-CoA kinase EI546_01020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_01020 PF00512 His Kinase A (phospho-acceptor) domain EI546_01025 PF00486 Transcriptional regulatory protein, C terminal EI546_01025 PF00072 Response regulator receiver domain EI546_01035 PF00520 Ion transport protein EI546_01035 PF00027 Cyclic nucleotide-binding domain EI546_01045 PF01168 Alanine racemase, N-terminal domain EI546_01055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EI546_01055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EI546_01060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EI546_01060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EI546_01075 PF03641 Possible lysine decarboxylase EI546_01080 PF01594 AI-2E family transporter EI546_01125 PF00593 TonB dependent receptor EI546_01125 PF07715 TonB-dependent Receptor Plug Domain EI546_01145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EI546_01145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EI546_01150 PF00266 Aminotransferase class-V EI546_01175 PF00037 4Fe-4S binding domain EI546_01220 PF02590 Predicted SPOUT methyltransferase EI546_01225 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EI546_01225 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EI546_01230 PF03631 Virulence factor BrkB EI546_01240 PF18074 Primosomal protein N C-terminal domain EI546_01240 PF04851 Type III restriction enzyme, res subunit EI546_01240 PF00271 Helicase conserved C-terminal domain EI546_01240 PF17764 3′ DNA-binding domain (3′BD) EI546_01240 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EI546_01245 PF01250 Ribosomal protein S6 EI546_01250 PF01084 Ribosomal protein S18 EI546_01255 PF01281 Ribosomal protein L9, N-terminal domain EI546_01255 PF03948 Ribosomal protein L9, C-terminal domain EI546_01270 PF00005 ABC transporter EI546_01270 PF12704 MacB-like periplasmic core domain EI546_01270 PF02687 FtsX-like permease family EI546_01275 PF03129 Anticodon binding domain EI546_01275 PF13393 Histidyl-tRNA synthetase EI546_01280 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 EI546_01280 PF00703 Glycosyl hydrolases family 2 EI546_01280 PF16355 Domain of unknown function (DUF4982) EI546_01280 PF02837 Glycosyl hydrolases family 2, sugar binding domain EI546_01280 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EI546_01285 PF01515 Phosphate acetyl/butaryl transferase EI546_01285 PF07085 DRTGG domain EI546_01290 PF00871 Acetokinase family EI546_01310 PF00561 alpha/beta hydrolase fold EI546_01315 PF00072 Response regulator receiver domain EI546_01315 PF04397 LytTr DNA-binding domain EI546_01320 PF00512 His Kinase A (phospho-acceptor) domain EI546_01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_01335 PF00881 Nitroreductase family EI546_01345 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EI546_01355 PF00925 GTP cyclohydrolase II EI546_01355 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EI546_01390 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EI546_01390 PF09397 Ftsk gamma domain EI546_01390 PF17854 FtsK alpha domain EI546_01390 PF01580 FtsK/SpoIIIE family EI546_01400 PF08534 Redoxin EI546_01410 PF00085 Thioredoxin EI546_01415 PF00578 AhpC/TSA family EI546_01415 PF10417 C-terminal domain of 1-Cys peroxiredoxin EI546_01445 PF01053 Cys/Met metabolism PLP-dependent enzyme EI546_01455 PF00872 Transposase, Mutator family EI546_01460 PF07992 Pyridine nucleotide-disulphide oxidoreductase EI546_01460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EI546_01540 PF03061 Thioesterase superfamily EI546_01545 PF00425 chorismate binding enzyme EI546_01550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EI546_01550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EI546_01555 PF11838 ERAP1-like C-terminal domain EI546_01555 PF01433 Peptidase family M1 domain EI546_01560 PF00005 ABC transporter EI546_01575 PF00226 DnaJ domain EI546_01575 PF00684 DnaJ central domain EI546_01575 PF01556 DnaJ C terminal domain EI546_01595 PF01645 Conserved region in glutamate synthase EI546_01625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EI546_01630 PF00873 AcrB/AcrD/AcrF family EI546_01650 PF00582 Universal stress protein family EI546_01655 PF01048 Phosphorylase superfamily EI546_01660 PF01791 DeoC/LacD family aldolase EI546_01665 PF00085 Thioredoxin EI546_01680 PF00512 His Kinase A (phospho-acceptor) domain EI546_01680 PF18698 Histidine kinase sensor domain EI546_01680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_01680 PF00672 HAMP domain EI546_01685 PF00486 Transcriptional regulatory protein, C terminal EI546_01685 PF00072 Response regulator receiver domain EI546_01755 PF02469 Fasciclin domain EI546_01760 PF18764 Nitrous oxide reductase propeller repeat EI546_01760 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EI546_01760 PF18793 Nitrous oxide reductase propeller repeat 2 EI546_01780 PF00005 ABC transporter EI546_01780 PF13732 Domain of unknown function (DUF4162) EI546_01805 PF00872 Transposase, Mutator family EI546_01815 PF02581 Thiamine monophosphate synthase EI546_01820 PF00270 DEAD/DEAH box helicase EI546_01820 PF00271 Helicase conserved C-terminal domain EI546_01835 PF07715 TonB-dependent Receptor Plug Domain EI546_01835 PF00593 TonB dependent receptor EI546_01845 PF00271 Helicase conserved C-terminal domain EI546_01845 PF12137 RNA polymerase recycling family C-terminal EI546_01845 PF00176 SNF2 family N-terminal domain EI546_01845 PF18339 RapA N-terminal Tudor like domain 1 EI546_01845 PF18337 RapA N-terminal Tudor like domain EI546_01860 PF04389 Peptidase family M28 EI546_01865 PF00271 Helicase conserved C-terminal domain EI546_01865 PF08463 EcoEI R protein C-terminal EI546_01865 PF04851 Type III restriction enzyme, res subunit EI546_01865 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) EI546_01880 PF12161 HsdM N-terminal domain EI546_01880 PF02384 N-6 DNA Methylase EI546_01885 PF01420 Type I restriction modification DNA specificity domain EI546_01920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EI546_01920 PF02770 Acyl-CoA dehydrogenase, middle domain EI546_01920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EI546_01925 PF00665 Integrase core domain EI546_01925 PF13276 HTH-like domain EI546_01950 PF03109 ABC1 family EI546_01985 PF00881 Nitroreductase family EI546_01995 PF01037 Lrp/AsnC ligand binding domain EI546_02015 PF01741 Large-conductance mechanosensitive channel, MscL EI546_02020 PF02224 Cytidylate kinase EI546_02030 PF00004 ATPase family associated with various cellular activities (AAA) EI546_02030 PF05362 Lon protease (S16) C-terminal proteolytic domain EI546_02030 PF02190 ATP-dependent protease La (LON) substrate-binding domain EI546_02035 PF08281 Sigma-70, region 4 EI546_02035 PF04542 Sigma-70 region 2 EI546_02055 PF11700 Vacuole effluxer Atg22 like EI546_02070 PF01641 SelR domain EI546_02075 PF01641 SelR domain EI546_02080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EI546_02080 PF07992 Pyridine nucleotide-disulphide oxidoreductase EI546_02085 PF01220 Dehydroquinase class II EI546_02115 PF02899 Phage integrase, N-terminal SAM-like domain EI546_02115 PF00589 Phage integrase family EI546_02120 PF00248 Aldo/keto reductase family EI546_02125 PF01966 HD domain EI546_02125 PF00013 KH domain EI546_02125 PF12072 Domain of unknown function (DUF3552) EI546_02145 PF08460 Bacterial SH3 domain EI546_02145 PF01551 Peptidase family M23 EI546_02155 PF00266 Aminotransferase class-V EI546_02175 PF00474 Sodium:solute symporter family EI546_02230 PF00549 CoA-ligase EI546_02230 PF02629 CoA binding domain EI546_02240 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EI546_02240 PF00132 Bacterial transferase hexapeptide (six repeats) EI546_02245 PF09285 Elongation factor P, C-terminal EI546_02245 PF08207 Elongation factor P (EF-P) KOW-like domain EI546_02245 PF01132 Elongation factor P (EF-P) OB domain EI546_02250 PF00132 Bacterial transferase hexapeptide (six repeats) EI546_02250 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EI546_02255 PF07977 FabA-like domain EI546_02255 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EI546_02260 PF00132 Bacterial transferase hexapeptide (six repeats) EI546_02260 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EI546_02265 PF01966 HD domain EI546_02270 PF02954 Bacterial regulatory protein, Fis family EI546_02270 PF00158 Sigma-54 interaction domain EI546_02270 PF00072 Response regulator receiver domain EI546_02275 PF01725 Ham1 family EI546_02280 PF00491 Arginase family EI546_02285 PF01979 Amidohydrolase family EI546_02290 PF00582 Universal stress protein family EI546_02295 PF01053 Cys/Met metabolism PLP-dependent enzyme EI546_02300 PF02585 GlcNAc-PI de-N-acetylase EI546_02325 PF00753 Metallo-beta-lactamase superfamily EI546_02325 PF00581 Rhodanese-like domain EI546_02335 PF04324 BFD-like [2Fe-2S] binding domain EI546_02335 PF01266 FAD dependent oxidoreductase EI546_02340 PF02743 Cache domain EI546_02340 PF00672 HAMP domain EI546_02340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_02340 PF06580 Histidine kinase EI546_02345 PF02146 Sir2 family EI546_02370 PF00588 SpoU rRNA Methylase family EI546_02380 PF12848 ABC transporter EI546_02380 PF00005 ABC transporter EI546_02400 PF01039 Carboxyl transferase domain EI546_02410 PF02463 RecF/RecN/SMC N terminal domain EI546_02420 PF04127 DNA / pantothenate metabolism flavoprotein EI546_02420 PF02441 Flavoprotein EI546_02435 PF00701 Dihydrodipicolinate synthetase family EI546_02445 PF01653 NAD-dependent DNA ligase adenylation domain EI546_02445 PF00533 BRCA1 C Terminus (BRCT) domain EI546_02445 PF03120 NAD-dependent DNA ligase OB-fold domain EI546_02445 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EI546_02445 PF12826 Helix-hairpin-helix motif EI546_02450 PF01653 NAD-dependent DNA ligase adenylation domain EI546_02450 PF00533 BRCA1 C Terminus (BRCT) domain EI546_02450 PF12826 Helix-hairpin-helix motif EI546_02450 PF03120 NAD-dependent DNA ligase OB-fold domain EI546_02450 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EI546_02465 PF00375 Sodium:dicarboxylate symporter family EI546_02470 PF01264 Chorismate synthase EI546_02475 PF01565 FAD binding domain EI546_02475 PF13183 4Fe-4S dicluster domain EI546_02475 PF02913 FAD linked oxidases, C-terminal domain EI546_02485 PF13439 Glycosyltransferase Family 4 EI546_02485 PF00534 Glycosyl transferases group 1 EI546_02495 PF01915 Glycosyl hydrolase family 3 C-terminal domain EI546_02495 PF00933 Glycosyl hydrolase family 3 N terminal domain EI546_02505 PF13183 4Fe-4S dicluster domain EI546_02505 PF02665 Nitrate reductase gamma subunit EI546_02505 PF02754 Cysteine-rich domain EI546_02515 PF13183 4Fe-4S dicluster domain EI546_02515 PF02754 Cysteine-rich domain EI546_02520 PF02470 MlaD protein EI546_02525 PF01520 N-acetylmuramoyl-L-alanine amidase EI546_02525 PF11741 AMIN domain EI546_02535 PF01042 Endoribonuclease L-PSP EI546_02545 PF05175 Methyltransferase small domain EI546_02545 PF17827 PrmC N-terminal domain EI546_02550 PF00583 Acetyltransferase (GNAT) family EI546_02555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EI546_02555 PF01872 RibD C-terminal domain EI546_02565 PF01205 Uncharacterized protein family UPF0029 EI546_02565 PF09186 Domain of unknown function (DUF1949) EI546_02575 PF00308 Bacterial dnaA protein EI546_02575 PF08299 Bacterial dnaA protein helix-turn-helix EI546_02575 PF11638 DnaA N-terminal domain EI546_02580 PF01451 Low molecular weight phosphotyrosine protein phosphatase EI546_02590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EI546_02600 PF02618 YceG-like family EI546_02610 PF01678 Diaminopimelate epimerase EI546_02615 PF00595 PDZ domain EI546_02630 PF04607 Region found in RelA / SpoT proteins EI546_02630 PF02824 TGS domain EI546_02630 PF13291 ACT domain EI546_02635 PF01475 Ferric uptake regulator family EI546_02640 PF00709 Adenylosuccinate synthetase EI546_02650 PF00202 Aminotransferase class-III EI546_02670 PF08501 Shikimate dehydrogenase substrate binding domain EI546_02670 PF01488 Shikimate / quinate 5-dehydrogenase EI546_02670 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EI546_02680 PF03819 MazG nucleotide pyrophosphohydrolase domain EI546_02685 PF00106 short chain dehydrogenase EI546_02690 PF02245 Methylpurine-DNA glycosylase (MPG) EI546_02710 PF00378 Enoyl-CoA hydratase/isomerase EI546_02735 PF03979 Sigma-70 factor, region 1.1 EI546_02735 PF00140 Sigma-70 factor, region 1.2 EI546_02735 PF04542 Sigma-70 region 2 EI546_02735 PF04539 Sigma-70 region 3 EI546_02735 PF04545 Sigma-70, region 4 EI546_02740 PF03600 Citrate transporter EI546_02740 PF02080 TrkA-C domain EI546_02745 PF13677 Membrane MotB of proton-channel complex MotA/MotB EI546_02745 PF00691 OmpA family EI546_02775 PF00012 Hsp70 protein EI546_02780 PF00872 Transposase, Mutator family EI546_02785 PF14579 Helix-hairpin-helix motif EI546_02785 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EI546_02785 PF07733 Bacterial DNA polymerase III alpha NTPase domain EI546_02785 PF02811 PHP domain EI546_02790 PF13607 Succinyl-CoA ligase like flavodoxin domain EI546_02790 PF13380 CoA binding domain EI546_02790 PF00583 Acetyltransferase (GNAT) family EI546_02810 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system EI546_02820 PF13361 UvrD-like helicase C-terminal domain EI546_02820 PF12705 PD-(D/E)XK nuclease superfamily EI546_02820 PF00580 UvrD/REP helicase N-terminal domain EI546_02825 PF17946 RecC C-terminal domain EI546_02830 PF13538 UvrD-like helicase C-terminal domain EI546_02840 PF11954 Domain of unknown function (DUF3471) EI546_02840 PF00144 Beta-lactamase EI546_02845 PF13783 Domain of unknown function (DUF4177) EI546_02865 PF08406 CbbQ/NirQ/NorQ C-terminal EI546_02865 PF07728 AAA domain (dynein-related subfamily) EI546_02870 PF00115 Cytochrome C and Quinol oxidase polypeptide I EI546_02875 PF00034 Cytochrome c EI546_02880 PF00588 SpoU rRNA Methylase family EI546_02885 PF14759 Reductase C-terminal EI546_02885 PF07992 Pyridine nucleotide-disulphide oxidoreductase EI546_02890 PF00872 Transposase, Mutator family EI546_02905 PF00849 RNA pseudouridylate synthase EI546_02910 PF01323 DSBA-like thioredoxin domain EI546_02940 PF01588 Putative tRNA binding domain EI546_02940 PF03484 tRNA synthetase B5 domain EI546_02940 PF03147 Ferredoxin-fold anticodon binding domain EI546_02940 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EI546_02940 PF03483 B3/4 domain EI546_02945 PF00202 Aminotransferase class-III EI546_02965 PF05139 Erythromycin esterase EI546_02965 PF00156 Phosphoribosyl transferase domain EI546_02975 PF10365 Domain of unknown function (DUF2436) EI546_02975 PF07675 Cleaved Adhesin Domain EI546_02990 PF12848 ABC transporter EI546_02990 PF00005 ABC transporter EI546_03000 PF00923 Transaldolase/Fructose-6-phosphate aldolase EI546_03010 PF01327 Polypeptide deformylase EI546_03015 PF03652 Holliday junction resolvase EI546_03020 PF00132 Bacterial transferase hexapeptide (six repeats) EI546_03020 PF14602 Hexapeptide repeat of succinyl-transferase EI546_03020 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EI546_03035 PF00535 Glycosyl transferase family 2 EI546_03040 PF00535 Glycosyl transferase family 2 EI546_03050 PF00535 Glycosyl transferase family 2 EI546_03060 PF00535 Glycosyl transferase family 2 EI546_03065 PF01300 Telomere recombination EI546_03075 PF13735 tRNA nucleotidyltransferase domain 2 putative EI546_03075 PF12627 Probable RNA and SrmB- binding site of polymerase A EI546_03075 PF01743 Poly A polymerase head domain EI546_03080 PF02628 Cytochrome oxidase assembly protein EI546_03100 PF10502 Signal peptidase, peptidase S26 EI546_03105 PF05173 Dihydrodipicolinate reductase, C-terminus EI546_03105 PF01113 Dihydrodipicolinate reductase, N-terminus EI546_03115 PF02195 ParB-like nuclease domain EI546_03115 PF17762 HTH domain found in ParB protein EI546_03120 PF13614 AAA domain EI546_03130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EI546_03130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EI546_03150 PF01746 tRNA (Guanine-1)-methyltransferase EI546_03160 PF01022 Bacterial regulatory protein, arsR family EI546_03170 PF01245 Ribosomal protein L19 EI546_03175 PF03971 Monomeric isocitrate dehydrogenase EI546_03190 PF00875 DNA photolyase EI546_03190 PF03441 FAD binding domain of DNA photolyase EI546_03200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EI546_03220 PF16124 RecQ zinc-binding EI546_03220 PF09382 RQC domain EI546_03220 PF00270 DEAD/DEAH box helicase EI546_03220 PF00570 HRDC domain EI546_03220 PF00271 Helicase conserved C-terminal domain EI546_03225 PF02911 Formyl transferase, C-terminal domain EI546_03225 PF00551 Formyl transferase EI546_03230 PF00216 Bacterial DNA-binding protein EI546_03235 PF02622 Uncharacterized ACR, COG1678 EI546_03250 PF07992 Pyridine nucleotide-disulphide oxidoreductase EI546_03255 PF06039 Malate:quinone oxidoreductase (Mqo) EI546_03285 PF11867 Domain of unknown function (DUF3387) EI546_03285 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EI546_03285 PF18766 SWI2/SNF2 ATPase EI546_03320 PF02384 N-6 DNA Methylase EI546_03320 PF12161 HsdM N-terminal domain EI546_03335 PF07693 KAP family P-loop domain EI546_03395 PF01609 Transposase DDE domain EI546_03435 PF01609 Transposase DDE domain EI546_03440 PF13495 Phage integrase, N-terminal SAM-like domain EI546_03440 PF00589 Phage integrase family EI546_03445 PF14319 Transposase zinc-binding domain EI546_03445 PF04986 Putative transposase EI546_03540 PF00781 Diacylglycerol kinase catalytic domain EI546_03545 PF00884 Sulfatase EI546_03555 PF18719 ArlS sensor domain EI546_03555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_03555 PF00512 His Kinase A (phospho-acceptor) domain EI546_03560 PF00072 Response regulator receiver domain EI546_03560 PF00486 Transcriptional regulatory protein, C terminal EI546_03570 PF00232 Glycosyl hydrolase family 1 EI546_03620 PF12102 Domain of unknown function (DUF3578) EI546_03620 PF07728 AAA domain (dynein-related subfamily) EI546_03765 PF04116 Fatty acid hydroxylase superfamily EI546_03785 PF01593 Flavin containing amine oxidoreductase EI546_03790 PF01047 MarR family EI546_03815 PF04679 ATP dependent DNA ligase C terminal region EI546_03815 PF13298 DNA polymerase Ligase (LigD) EI546_03815 PF01068 ATP dependent DNA ligase domain EI546_03820 PF02311 AraC-like ligand binding domain EI546_03820 PF12833 Helix-turn-helix domain EI546_03845 PF03275 UDP-galactopyranose mutase EI546_03940 PF12833 Helix-turn-helix domain EI546_03940 PF10114 Sensory domain found in PocR EI546_03945 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EI546_03950 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EI546_03950 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EI546_03960 PF01619 Proline dehydrogenase EI546_03965 PF01761 3-dehydroquinate synthase EI546_03975 PF03741 Integral membrane protein TerC family EI546_03995 PF00691 OmpA family EI546_04010 PF02780 Transketolase, C-terminal domain EI546_04010 PF02779 Transketolase, pyrimidine binding domain EI546_04025 PF01048 Phosphorylase superfamily EI546_04035 PF03167 Uracil DNA glycosylase superfamily EI546_04040 PF01713 Smr domain EI546_04040 PF00488 MutS domain V EI546_04045 PF04134 Protein of unknown function, DUF393 EI546_04055 PF01227 GTP cyclohydrolase I EI546_04060 PF00005 ABC transporter EI546_04070 PF00512 His Kinase A (phospho-acceptor) domain EI546_04070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_04080 PF01979 Amidohydrolase family EI546_04100 PF12706 Beta-lactamase superfamily domain EI546_04100 PF03099 Biotin/lipoate A/B protein ligase family EI546_04110 PF00578 AhpC/TSA family EI546_04115 PF00633 Helix-hairpin-helix motif EI546_04115 PF00730 HhH-GPD superfamily base excision DNA repair protein EI546_04115 PF10576 Iron-sulfur binding domain of endonuclease III EI546_04120 PF04389 Peptidase family M28 EI546_04120 PF04151 Bacterial pre-peptidase C-terminal domain EI546_04125 PF03976 Polyphosphate kinase 2 (PPK2) EI546_04130 PF00072 Response regulator receiver domain EI546_04130 PF00158 Sigma-54 interaction domain EI546_04130 PF02954 Bacterial regulatory protein, Fis family EI546_04145 PF00005 ABC transporter EI546_04145 PF13732 Domain of unknown function (DUF4162) EI546_04150 PF00226 DnaJ domain EI546_04150 PF01556 DnaJ C terminal domain EI546_04150 PF00684 DnaJ central domain EI546_04155 PF01025 GrpE EI546_04165 PF08338 Domain of unknown function (DUF1731) EI546_04165 PF01370 NAD dependent epimerase/dehydratase family EI546_04170 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EI546_04170 PF01266 FAD dependent oxidoreductase EI546_04180 PF01063 Amino-transferase class IV EI546_04195 PF00535 Glycosyl transferase family 2 EI546_04225 PF01037 Lrp/AsnC ligand binding domain EI546_04240 PF02310 B12 binding domain EI546_04240 PF01642 Methylmalonyl-CoA mutase EI546_04260 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EI546_04265 PF03462 PCRF domain EI546_04265 PF00472 RF-1 domain EI546_04270 PF01555 DNA methylase EI546_04290 PF02769 AIR synthase related protein, C-terminal domain EI546_04290 PF00586 AIR synthase related protein, N-terminal domain EI546_04300 PF18318 Glutamine synthetase C-terminal domain EI546_04300 PF00120 Glutamine synthetase, catalytic domain EI546_04300 PF12437 Glutamine synthetase type III N terminal EI546_04305 PF01699 Sodium/calcium exchanger protein EI546_04320 PF00313 'Cold-shock' DNA-binding domain EI546_04330 PF00857 Isochorismatase family EI546_04335 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EI546_04335 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EI546_04335 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain EI546_04340 PF01212 Beta-eliminating lyase EI546_04375 PF03960 ArsC family EI546_04380 PF00593 TonB dependent receptor EI546_04380 PF07715 TonB-dependent Receptor Plug Domain EI546_04385 PF00155 Aminotransferase class I and II EI546_04390 PF00291 Pyridoxal-phosphate dependent enzyme EI546_04390 PF00571 CBS domain EI546_04395 PF00326 Prolyl oligopeptidase family EI546_04395 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EI546_04400 PF02575 YbaB/EbfC DNA-binding family EI546_04405 PF01609 Transposase DDE domain EI546_04420 PF03458 UPF0126 domain EI546_04425 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EI546_04440 PF07411 Domain of unknown function (DUF1508) EI546_04445 PF01625 Peptide methionine sulfoxide reductase EI546_04465 PF04264 YceI-like domain EI546_04470 PF05726 Pirin C-terminal cupin domain EI546_04470 PF02678 Pirin EI546_04480 PF00403 Heavy-metal-associated domain EI546_04485 PF12823 Domain of unknown function (DUF3817) EI546_04490 PF00924 Mechanosensitive ion channel EI546_04500 PF00171 Aldehyde dehydrogenase family EI546_04505 PF01571 Aminomethyltransferase folate-binding domain EI546_04505 PF08669 Glycine cleavage T-protein C-terminal barrel domain EI546_04510 PF04960 Glutaminase EI546_04520 PF01329 Pterin 4 alpha carbinolamine dehydratase EI546_04525 PF01709 Transcriptional regulator EI546_04530 PF00132 Bacterial transferase hexapeptide (six repeats) EI546_04530 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EI546_04545 PF00465 Iron-containing alcohol dehydrogenase EI546_04550 PF13538 UvrD-like helicase C-terminal domain EI546_04550 PF14490 Helix-hairpin-helix containing domain EI546_04550 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain EI546_04565 PF02926 THUMP domain EI546_04565 PF10672 S-adenosylmethionine-dependent methyltransferase EI546_04565 PF01170 Putative RNA methylase family UPF0020 EI546_04575 PF12169 DNA polymerase III subunits gamma and tau domain III EI546_04585 PF00654 Voltage gated chloride channel EI546_04590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_04590 PF06580 Histidine kinase EI546_04595 PF04397 LytTr DNA-binding domain EI546_04595 PF00072 Response regulator receiver domain EI546_04600 PF00326 Prolyl oligopeptidase family EI546_04600 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EI546_04610 PF00150 Cellulase (glycosyl hydrolase family 5) EI546_04620 PF01321 Creatinase/Prolidase N-terminal domain EI546_04620 PF00557 Metallopeptidase family M24 EI546_04635 PF13090 Polyphosphate kinase C-terminal domain 2 EI546_04635 PF02503 Polyphosphate kinase middle domain EI546_04635 PF17941 Polyphosphate kinase C-terminal domain 1 EI546_04635 PF13089 Polyphosphate kinase N-terminal domain EI546_04660 PF01596 O-methyltransferase EI546_04670 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EI546_04670 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EI546_04675 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EI546_04680 PF01569 PAP2 superfamily EI546_04685 PF02416 mttA/Hcf106 family EI546_04695 PF00916 Sulfate permease family EI546_04695 PF01740 STAS domain EI546_04705 PF13847 Methyltransferase domain EI546_04725 PF03466 LysR substrate binding domain EI546_04725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EI546_04730 PF03972 MmgE/PrpD family EI546_04740 PF01541 GIY-YIG catalytic domain EI546_04740 PF02151 UvrB/uvrC motif EI546_04740 PF08459 UvrC Helix-hairpin-helix N-terminal EI546_04745 PF00872 Transposase, Mutator family EI546_04760 PF02082 Transcriptional regulator EI546_04770 PF07992 Pyridine nucleotide-disulphide oxidoreductase EI546_04775 PF02609 Exonuclease VII small subunit EI546_04780 PF02601 Exonuclease VII, large subunit EI546_04780 PF13742 OB-fold nucleic acid binding domain EI546_04785 PF01256 Carbohydrate kinase EI546_04820 PF04299 Putative FMN-binding domain EI546_04835 PF03595 Voltage-dependent anion channel EI546_04850 PF01734 Patatin-like phospholipase EI546_04855 PF00072 Response regulator receiver domain EI546_04855 PF01339 CheB methylesterase EI546_04860 PF00360 Phytochrome region EI546_04860 PF00512 His Kinase A (phospho-acceptor) domain EI546_04860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_04860 PF01590 GAF domain EI546_04860 PF08446 PAS fold EI546_04865 PF00072 Response regulator receiver domain EI546_04865 PF00990 Diguanylate cyclase, GGDEF domain EI546_04875 PF03372 Endonuclease/Exonuclease/phosphatase family EI546_04890 PF01972 Serine dehydrogenase proteinase EI546_04890 PF01957 NfeD-like C-terminal, partner-binding EI546_04895 PF16200 C-terminal region of band_7 EI546_04895 PF01145 SPFH domain / Band 7 family EI546_04920 PF00873 AcrB/AcrD/AcrF family EI546_04955 PF10417 C-terminal domain of 1-Cys peroxiredoxin EI546_04955 PF00578 AhpC/TSA family EI546_04970 PF00005 ABC transporter EI546_04975 PF02405 Permease MlaE EI546_05025 PF00578 AhpC/TSA family EI546_05030 PF00694 Aconitase C-terminal domain EI546_05030 PF00330 Aconitase family (aconitate hydratase) EI546_05035 PF17863 AAA lid domain EI546_05035 PF07726 ATPase family associated with various cellular activities (AAA) EI546_05040 PF09312 SurA N-terminal domain EI546_05040 PF00639 PPIC-type PPIASE domain EI546_05050 PF09312 SurA N-terminal domain EI546_05050 PF00639 PPIC-type PPIASE domain EI546_05075 PF00571 CBS domain EI546_05075 PF00478 IMP dehydrogenase / GMP reductase domain EI546_05100 PF00149 Calcineurin-like phosphoesterase EI546_05100 PF02872 5'-nucleotidase, C-terminal domain EI546_05105 PF00682 HMGL-like EI546_05115 PF01810 LysE type translocator EI546_05120 PF01180 Dihydroorotate dehydrogenase EI546_05125 PF01546 Peptidase family M20/M25/M40 EI546_05125 PF07687 Peptidase dimerisation domain EI546_05130 PF04286 Protein of unknown function (DUF445) EI546_05135 PF12706 Beta-lactamase superfamily domain EI546_05145 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EI546_05145 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EI546_05150 PF00156 Phosphoribosyl transferase domain EI546_05160 PF00575 S1 RNA binding domain EI546_05165 PF00521 DNA gyrase/topoisomerase IV, subunit A EI546_05170 PF01751 Toprim domain EI546_05170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_05170 PF00204 DNA gyrase B EI546_05170 PF00986 DNA gyrase B subunit, carboxyl terminus EI546_05175 PF00226 DnaJ domain EI546_05175 PF01556 DnaJ C terminal domain EI546_05175 PF00684 DnaJ central domain EI546_05190 PF01926 50S ribosome-binding GTPase EI546_05190 PF06071 Protein of unknown function (DUF933) EI546_05200 PF03575 Peptidase family S51 EI546_05210 PF02557 D-alanyl-D-alanine carboxypeptidase EI546_05215 PF01676 Metalloenzyme superfamily EI546_05215 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EI546_05220 PF02881 SRP54-type protein, helical bundle domain EI546_05220 PF00448 SRP54-type protein, GTPase domain EI546_05230 PF00471 Ribosomal protein L33 EI546_05235 PF00830 Ribosomal L28 family EI546_05240 PF00994 Probable molybdopterin binding domain EI546_05240 PF18146 Damage-inducible protein CinA KH domain EI546_05240 PF02464 Competence-damaged protein EI546_05245 PF01557 Fumarylacetoacetate (FAA) hydrolase family EI546_05250 PF00929 Exonuclease EI546_05255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EI546_05255 PF00364 Biotin-requiring enzyme EI546_05255 PF02817 e3 binding domain EI546_05265 PF13662 Toprim domain EI546_05265 PF02132 RecR protein EI546_05275 PF00474 Sodium:solute symporter family EI546_05285 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EI546_05285 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EI546_05290 PF00326 Prolyl oligopeptidase family EI546_05300 PF00183 Hsp90 protein EI546_05340 PF01238 Phosphomannose isomerase type I EI546_05350 PF00293 NUDIX domain EI546_05355 PF16658 Class II release factor RF3, C-terminal domain EI546_05355 PF00009 Elongation factor Tu GTP binding domain EI546_05355 PF03144 Elongation factor Tu domain 2 EI546_05375 PF13580 SIS domain EI546_05420 PF05343 M42 glutamyl aminopeptidase EI546_05425 PF01235 Sodium:alanine symporter family EI546_05435 PF01259 SAICAR synthetase EI546_05440 PF02562 PhoH-like protein EI546_05465 PF00712 DNA polymerase III beta subunit, N-terminal domain EI546_05465 PF02767 DNA polymerase III beta subunit, central domain EI546_05465 PF02768 DNA polymerase III beta subunit, C-terminal domain EI546_05480 PF12631 MnmE helical domain EI546_05480 PF10396 GTP-binding protein TrmE N-terminus EI546_05480 PF01926 50S ribosome-binding GTPase EI546_05490 PF00589 Phage integrase family EI546_05490 PF02899 Phage integrase, N-terminal SAM-like domain EI546_05525 PF12161 HsdM N-terminal domain EI546_05525 PF02384 N-6 DNA Methylase EI546_05530 PF01420 Type I restriction modification DNA specificity domain EI546_05570 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EI546_05575 PF00144 Beta-lactamase EI546_05610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EI546_05620 PF07732 Multicopper oxidase EI546_05650 PF13746 4Fe-4S dicluster domain EI546_05650 PF12801 4Fe-4S binding domain EI546_05650 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EI546_05655 PF00034 Cytochrome c EI546_05655 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EI546_05655 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EI546_05665 PF00115 Cytochrome C and Quinol oxidase polypeptide I EI546_05675 PF00403 Heavy-metal-associated domain EI546_05685 PF01814 Hemerythrin HHE cation binding domain EI546_05685 PF04405 Domain of Unknown function (DUF542) EI546_05700 PF00106 short chain dehydrogenase EI546_05705 PF02627 Carboxymuconolactone decarboxylase family EI546_05710 PF02627 Carboxymuconolactone decarboxylase family EI546_05730 PF00034 Cytochrome c EI546_05735 PF00115 Cytochrome C and Quinol oxidase polypeptide I EI546_05740 PF02082 Transcriptional regulator EI546_05755 PF00210 Ferritin-like domain EI546_05785 PF05736 OprF membrane domain EI546_05785 PF00691 OmpA family EI546_05810 PF00578 AhpC/TSA family EI546_05815 PF04402 Protein of unknown function (DUF541) EI546_05820 PF01694 Rhomboid family EI546_05865 PF03062 MBOAT, membrane-bound O-acyltransferase family EI546_05870 PF01820 D-ala D-ala ligase N-terminus EI546_05870 PF07478 D-ala D-ala ligase C-terminus EI546_05875 PF00551 Formyl transferase EI546_05880 PF02397 Bacterial sugar transferase EI546_05905 PF16363 GDP-mannose 4,6 dehydratase EI546_05910 PF01370 NAD dependent epimerase/dehydratase family EI546_05920 PF00534 Glycosyl transferases group 1 EI546_05950 PF13439 Glycosyltransferase Family 4 EI546_05950 PF00534 Glycosyl transferases group 1 EI546_05980 PF14667 Polysaccharide biosynthesis C-terminal domain EI546_05985 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EI546_05985 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EI546_05985 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EI546_05995 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EI546_06005 PF02350 UDP-N-acetylglucosamine 2-epimerase EI546_06010 PF01370 NAD dependent epimerase/dehydratase family EI546_06015 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EI546_06015 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EI546_06015 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EI546_06020 PF00009 Elongation factor Tu GTP binding domain EI546_06025 PF01507 Phosphoadenosine phosphosulfate reductase family EI546_06040 PF01370 NAD dependent epimerase/dehydratase family EI546_06045 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EI546_06045 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EI546_06045 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EI546_06050 PF00459 Inositol monophosphatase family EI546_06060 PF02910 Fumarate reductase flavoprotein C-term EI546_06060 PF00890 FAD binding domain EI546_06065 PF02445 Quinolinate synthetase A protein EI546_06070 PF00817 impB/mucB/samB family EI546_06070 PF11798 IMS family HHH motif EI546_06070 PF11799 impB/mucB/samB family C-terminal domain EI546_06075 PF03313 Serine dehydratase alpha chain EI546_06075 PF03315 Serine dehydratase beta chain EI546_06080 PF02548 Ketopantoate hydroxymethyltransferase EI546_06085 PF01479 S4 domain EI546_06085 PF00849 RNA pseudouridylate synthase EI546_06090 PF00196 Bacterial regulatory proteins, luxR family EI546_06090 PF00072 Response regulator receiver domain EI546_06095 PF17200 Single Cache domain 2 EI546_06095 PF07730 Histidine kinase EI546_06110 PF14437 MafB19-like deaminase EI546_06115 PF02436 Conserved carboxylase domain EI546_06115 PF00364 Biotin-requiring enzyme EI546_06115 PF00682 HMGL-like EI546_06120 PF02785 Biotin carboxylase C-terminal domain EI546_06120 PF00289 Biotin carboxylase, N-terminal domain EI546_06120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EI546_06125 PF01039 Carboxyl transferase domain EI546_06130 PF01475 Ferric uptake regulator family EI546_06150 PF00202 Aminotransferase class-III EI546_06155 PF01938 TRAM domain EI546_06155 PF05958 tRNA (Uracil-5-)-methyltransferase EI546_06170 PF10672 S-adenosylmethionine-dependent methyltransferase EI546_06170 PF02926 THUMP domain EI546_06170 PF01170 Putative RNA methylase family UPF0020 EI546_06175 PF13649 Methyltransferase domain EI546_06195 PF02719 Polysaccharide biosynthesis protein EI546_06200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EI546_06205 PF02397 Bacterial sugar transferase EI546_06230 PF08676 MutL C terminal dimerisation domain EI546_06230 PF01119 DNA mismatch repair protein, C-terminal domain EI546_06240 PF00885 6,7-dimethyl-8-ribityllumazine synthase EI546_06250 PF02463 RecF/RecN/SMC N terminal domain EI546_06265 PF00005 ABC transporter EI546_06275 PF00534 Glycosyl transferases group 1 EI546_06275 PF13439 Glycosyltransferase Family 4 EI546_06310 PF00534 Glycosyl transferases group 1 EI546_06330 PF00534 Glycosyl transferases group 1 EI546_06330 PF13439 Glycosyltransferase Family 4 EI546_06335 PF00534 Glycosyl transferases group 1 EI546_06335 PF13439 Glycosyltransferase Family 4 EI546_06340 PF00535 Glycosyl transferase family 2 EI546_06345 PF00535 Glycosyl transferase family 2 EI546_06350 PF00535 Glycosyl transferase family 2 EI546_06355 PF00534 Glycosyl transferases group 1 EI546_06355 PF13439 Glycosyltransferase Family 4 EI546_06365 PF05711 Macrocin-O-methyltransferase (TylF) EI546_06370 PF00005 ABC transporter EI546_06370 PF14524 Wzt C-terminal domain EI546_06375 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EI546_06525 PF00574 Clp protease EI546_06660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EI546_06660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EI546_06660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EI546_06660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EI546_06675 PF17760 UvrA interaction domain EI546_06675 PF17755 UvrA DNA-binding domain EI546_06685 PF03641 Possible lysine decarboxylase EI546_06715 PF02780 Transketolase, C-terminal domain EI546_06715 PF02779 Transketolase, pyrimidine binding domain EI546_06725 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EI546_06730 PF00561 alpha/beta hydrolase fold EI546_06740 PF00464 Serine hydroxymethyltransferase EI546_06755 PF03796 DnaB-like helicase C terminal domain EI546_06755 PF00772 DnaB-like helicase N terminal domain EI546_06760 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EI546_06775 PF01702 Queuine tRNA-ribosyltransferase EI546_06780 PF02780 Transketolase, C-terminal domain EI546_06780 PF00456 Transketolase, thiamine diphosphate binding domain EI546_06780 PF02779 Transketolase, pyrimidine binding domain EI546_06785 PF02780 Transketolase, C-terminal domain EI546_06785 PF02779 Transketolase, pyrimidine binding domain EI546_06800 PF00156 Phosphoribosyl transferase domain EI546_06805 PF01202 Shikimate kinase EI546_06815 PF01668 SmpB protein EI546_06820 PF00570 HRDC domain EI546_06820 PF09382 RQC domain EI546_06820 PF00270 DEAD/DEAH box helicase EI546_06820 PF16124 RecQ zinc-binding EI546_06820 PF00271 Helicase conserved C-terminal domain EI546_06825 PF01380 SIS domain EI546_06825 PF00571 CBS domain EI546_06830 PF00902 Sec-independent protein translocase protein (TatC) EI546_06835 PF02627 Carboxymuconolactone decarboxylase family EI546_06840 PF12399 Branched-chain amino acid ATP-binding cassette transporter EI546_06840 PF00005 ABC transporter EI546_06845 PF01066 CDP-alcohol phosphatidyltransferase EI546_06865 PF02397 Bacterial sugar transferase EI546_06870 PF00534 Glycosyl transferases group 1 EI546_06875 PF00534 Glycosyl transferases group 1 EI546_06875 PF13439 Glycosyltransferase Family 4 EI546_06880 PF13439 Glycosyltransferase Family 4 EI546_06880 PF00534 Glycosyl transferases group 1 EI546_06885 PF01923 Cobalamin adenosyltransferase EI546_06895 PF07516 SecA Wing and Scaffold domain EI546_06895 PF01043 SecA preprotein cross-linking domain EI546_06895 PF07517 SecA DEAD-like domain EI546_06925 PF12320 Type 5 capsule protein repressor C-terminal domain EI546_06925 PF00149 Calcineurin-like phosphoesterase EI546_06930 PF13476 AAA domain EI546_06940 PF10459 Peptidase S46 EI546_06945 PF01432 Peptidase family M3 EI546_06955 PF03883 Peroxide stress protein YaaA EI546_06960 PF03471 Transporter associated domain EI546_06960 PF02080 TrkA-C domain EI546_06960 PF00999 Sodium/hydrogen exchanger family EI546_06980 PF00005 ABC transporter EI546_06980 PF16326 ABC transporter C-terminal domain EI546_06980 PF12848 ABC transporter EI546_06990 PF07715 TonB-dependent Receptor Plug Domain EI546_06990 PF00593 TonB dependent receptor EI546_06995 PF04972 BON domain EI546_06995 PF01476 LysM domain EI546_07000 PF01965 DJ-1/PfpI family EI546_07005 PF05661 Protein of unknown function (DUF808) EI546_07015 PF07690 Major Facilitator Superfamily EI546_07020 PF10459 Peptidase S46 EI546_07040 PF01594 AI-2E family transporter EI546_07075 PF00196 Bacterial regulatory proteins, luxR family EI546_07075 PF00072 Response regulator receiver domain EI546_07080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_07080 PF07730 Histidine kinase EI546_07080 PF13492 GAF domain EI546_07080 PF13185 GAF domain EI546_07090 PF07697 7TM-HD extracellular EI546_07090 PF01966 HD domain EI546_07090 PF07698 7TM receptor with intracellular HD hydrolase EI546_07095 PF02803 Thiolase, C-terminal domain EI546_07095 PF00108 Thiolase, N-terminal domain EI546_07100 PF00877 NlpC/P60 family EI546_07100 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain EI546_07110 PF00521 DNA gyrase/topoisomerase IV, subunit A EI546_07110 PF03989 DNA gyrase C-terminal domain, beta-propeller EI546_07115 PF07724 AAA domain (Cdc48 subfamily) EI546_07115 PF10431 C-terminal, D2-small domain, of ClpB protein EI546_07115 PF00004 ATPase family associated with various cellular activities (AAA) EI546_07115 PF02861 Clp amino terminal domain, pathogenicity island component EI546_07115 PF17871 AAA lid domain EI546_07120 PF00221 Aromatic amino acid lyase EI546_07125 PF08534 Redoxin EI546_07130 PF01578 Cytochrome C assembly protein EI546_07130 PF05140 ResB-like family EI546_07155 PF02545 Maf-like protein EI546_07175 PF00474 Sodium:solute symporter family EI546_07190 PF01029 NusB family EI546_07190 PF01189 16S rRNA methyltransferase RsmB/F EI546_07210 PF00501 AMP-binding enzyme EI546_07220 PF01047 MarR family EI546_07235 PF02803 Thiolase, C-terminal domain EI546_07235 PF00108 Thiolase, N-terminal domain EI546_07245 PF02770 Acyl-CoA dehydrogenase, middle domain EI546_07245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EI546_07245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EI546_07250 PF01479 S4 domain EI546_07250 PF00849 RNA pseudouridylate synthase EI546_07260 PF07478 D-ala D-ala ligase C-terminus EI546_07260 PF01820 D-ala D-ala ligase N-terminus EI546_07265 PF02684 Lipid-A-disaccharide synthetase EI546_07270 PF00877 NlpC/P60 family EI546_07275 PF03772 Competence protein EI546_07275 PF13567 Domain of unknown function (DUF4131) EI546_07275 PF00753 Metallo-beta-lactamase superfamily EI546_07285 PF00854 POT family EI546_07290 PF00854 POT family EI546_07295 PF00854 POT family EI546_07300 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EI546_07300 PF00326 Prolyl oligopeptidase family EI546_07305 PF03448 MgtE intracellular N domain EI546_07305 PF00571 CBS domain EI546_07305 PF01769 Divalent cation transporter EI546_07320 PF00285 Citrate synthase, C-terminal domain EI546_07325 PF00113 Enolase, C-terminal TIM barrel domain EI546_07325 PF03952 Enolase, N-terminal domain EI546_07335 PF00117 Glutamine amidotransferase class-I EI546_07335 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EI546_07340 PF01196 Ribosomal protein L17 EI546_07345 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EI546_07345 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EI546_07345 PF01000 RNA polymerase Rpb3/RpoA insert domain EI546_07350 PF00163 Ribosomal protein S4/S9 N-terminal domain EI546_07350 PF01479 S4 domain EI546_07355 PF00411 Ribosomal protein S11 EI546_07360 PF00416 Ribosomal protein S13/S18 EI546_07365 PF00444 Ribosomal protein L36 EI546_07370 PF01176 Translation initiation factor 1A / IF-1 EI546_07375 PF00344 SecY translocase EI546_07380 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EI546_07385 PF00327 Ribosomal protein L30p/L7e EI546_07390 PF00333 Ribosomal protein S5, N-terminal domain EI546_07390 PF03719 Ribosomal protein S5, C-terminal domain EI546_07395 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EI546_07400 PF00347 Ribosomal protein L6 EI546_07405 PF00410 Ribosomal protein S8 EI546_07410 PF00253 Ribosomal protein S14p/S29e EI546_07415 PF00281 Ribosomal protein L5 EI546_07415 PF00673 ribosomal L5P family C-terminus EI546_07420 PF00467 KOW motif EI546_07420 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EI546_07425 PF00238 Ribosomal protein L14p/L23e EI546_07430 PF00366 Ribosomal protein S17 EI546_07435 PF00831 Ribosomal L29 protein EI546_07440 PF00252 Ribosomal protein L16p/L10e EI546_07445 PF00189 Ribosomal protein S3, C-terminal domain EI546_07445 PF07650 KH domain EI546_07450 PF00237 Ribosomal protein L22p/L17e EI546_07455 PF00203 Ribosomal protein S19 EI546_07460 PF00181 Ribosomal Proteins L2, RNA binding domain EI546_07460 PF03947 Ribosomal Proteins L2, C-terminal domain EI546_07465 PF00276 Ribosomal protein L23 EI546_07470 PF00573 Ribosomal protein L4/L1 family EI546_07475 PF00297 Ribosomal protein L3 EI546_07480 PF00338 Ribosomal protein S10p/S20e EI546_07485 PF00679 Elongation factor G C-terminus EI546_07485 PF14492 Elongation Factor G, domain II EI546_07485 PF03144 Elongation factor Tu domain 2 EI546_07485 PF00009 Elongation factor Tu GTP binding domain EI546_07485 PF03764 Elongation factor G, domain IV EI546_07490 PF00177 Ribosomal protein S7p/S5e EI546_07495 PF00164 Ribosomal protein S12/S23 EI546_07505 PF07715 TonB-dependent Receptor Plug Domain EI546_07505 PF00593 TonB dependent receptor EI546_07515 PF00588 SpoU rRNA Methylase family EI546_07515 PF08032 RNA 2'-O ribose methyltransferase substrate binding EI546_07525 PF00004 ATPase family associated with various cellular activities (AAA) EI546_07525 PF12002 MgsA AAA+ ATPase C terminal EI546_07525 PF16193 AAA C-terminal domain EI546_07545 PF04002 RadC-like JAB domain EI546_07575 PF09424 Yqey-like protein EI546_07580 PF00091 Tubulin/FtsZ family, GTPase domain EI546_07580 PF12327 FtsZ family, C-terminal domain EI546_07585 PF02491 SHS2 domain inserted in FTSA EI546_07595 PF01225 Mur ligase family, catalytic domain EI546_07595 PF02875 Mur ligase family, glutamate ligase domain EI546_07595 PF08245 Mur ligase middle domain EI546_07600 PF04101 Glycosyltransferase family 28 C-terminal domain EI546_07600 PF03033 Glycosyltransferase family 28 N-terminal domain EI546_07605 PF01098 Cell cycle protein EI546_07610 PF02875 Mur ligase family, glutamate ligase domain EI546_07610 PF08245 Mur ligase middle domain EI546_07615 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EI546_07615 PF00953 Glycosyl transferase family 4 EI546_07620 PF01225 Mur ligase family, catalytic domain EI546_07620 PF02875 Mur ligase family, glutamate ligase domain EI546_07620 PF08245 Mur ligase middle domain EI546_07625 PF03717 Penicillin-binding Protein dimerisation domain EI546_07625 PF00905 Penicillin binding protein transpeptidase domain EI546_07625 PF03793 PASTA domain EI546_07635 PF01795 MraW methylase family EI546_07640 PF02381 MraZ protein, putative antitoxin-like EI546_07645 PF12146 Serine aminopeptidase, S33 EI546_07650 PF01926 50S ribosome-binding GTPase EI546_07670 PF02540 NAD synthase EI546_07675 PF01807 CHC2 zinc finger EI546_07675 PF08275 DNA primase catalytic core, N-terminal domain EI546_07675 PF10410 DnaB-helicase binding domain of primase EI546_07690 PF04542 Sigma-70 region 2 EI546_07690 PF08281 Sigma-70, region 4 EI546_07695 PF00348 Polyprenyl synthetase EI546_07700 PF04055 Radical SAM superfamily EI546_07710 PF02547 Queuosine biosynthesis protein EI546_07715 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EI546_07725 PF03819 MazG nucleotide pyrophosphohydrolase domain EI546_07740 PF02580 D-Tyr-tRNA(Tyr) deacylase EI546_07745 PF16745 RsgA N-terminal domain EI546_07745 PF03193 RsgA GTPase EI546_07750 PF00872 Transposase, Mutator family EI546_07755 PF00834 Ribulose-phosphate 3 epimerase family EI546_07770 PF07715 TonB-dependent Receptor Plug Domain EI546_07770 PF00593 TonB dependent receptor EI546_07780 PF01609 Transposase DDE domain EI546_07810 PF00873 AcrB/AcrD/AcrF family EI546_07815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EI546_07850 PF02687 FtsX-like permease family EI546_07850 PF00005 ABC transporter EI546_07850 PF12704 MacB-like periplasmic core domain EI546_07855 PF02142 MGS-like domain EI546_07855 PF01808 AICARFT/IMPCHase bienzyme EI546_07875 PF00905 Penicillin binding protein transpeptidase domain EI546_07875 PF03717 Penicillin-binding Protein dimerisation domain EI546_07880 PF01098 Cell cycle protein EI546_07890 PF00528 Binding-protein-dependent transport system inner membrane component EI546_07890 PF12911 N-terminal TM domain of oligopeptide transport permease C EI546_07895 PF00595 PDZ domain EI546_07895 PF11818 C-terminal domain of tail specific protease (DUF3340) EI546_07895 PF03572 Peptidase family S41 EI546_07895 PF17804 Tail specific protease N-terminal domain EI546_07900 PF01975 Survival protein SurE EI546_07910 PF01467 Cytidylyltransferase-like EI546_07915 PF01649 Ribosomal protein S20 EI546_07925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EI546_07925 PF09180 Prolyl-tRNA synthetase, C-terminal EI546_07925 PF03129 Anticodon binding domain EI546_07945 PF01227 GTP cyclohydrolase I EI546_07955 PF01406 tRNA synthetases class I (C) catalytic domain EI546_07955 PF09190 DALR domain EI546_07960 PF01809 Putative membrane protein insertion efficiency factor EI546_07965 PF01790 Prolipoprotein diacylglyceryl transferase EI546_07975 PF07549 SecD/SecF GG Motif EI546_07975 PF02355 Protein export membrane protein EI546_08000 PF00317 Ribonucleotide reductase, all-alpha domain EI546_08000 PF02867 Ribonucleotide reductase, barrel domain EI546_08000 PF03477 ATP cone domain EI546_08010 PF07992 Pyridine nucleotide-disulphide oxidoreductase EI546_08010 PF18113 Rubredoxin binding C-terminal domain EI546_08015 PF04405 Domain of Unknown function (DUF542) EI546_08015 PF01814 Hemerythrin HHE cation binding domain EI546_08030 PF00535 Glycosyl transferase family 2 EI546_08040 PF08245 Mur ligase middle domain EI546_08040 PF02875 Mur ligase family, glutamate ligase domain EI546_08040 PF01225 Mur ligase family, catalytic domain EI546_08055 PF01926 50S ribosome-binding GTPase EI546_08055 PF01018 GTP1/OBG EI546_08080 PF13090 Polyphosphate kinase C-terminal domain 2 EI546_08080 PF13089 Polyphosphate kinase N-terminal domain EI546_08080 PF02503 Polyphosphate kinase middle domain EI546_08080 PF17941 Polyphosphate kinase C-terminal domain 1 EI546_08085 PF01712 Deoxynucleoside kinase EI546_08115 PF01507 Phosphoadenosine phosphosulfate reductase family EI546_08145 PF00351 Biopterin-dependent aromatic amino acid hydroxylase EI546_08155 PF00111 2Fe-2S iron-sulfur cluster binding domain EI546_08155 PF00175 Oxidoreductase NAD-binding domain EI546_08155 PF00970 Oxidoreductase FAD-binding domain EI546_08160 PF05138 Phenylacetic acid catabolic protein EI546_08175 PF06243 Phenylacetic acid degradation B EI546_08185 PF05138 Phenylacetic acid catabolic protein EI546_08195 PF01883 Iron-sulfur cluster assembly protein EI546_08220 PF00378 Enoyl-CoA hydratase/isomerase EI546_08225 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain EI546_08225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EI546_08225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EI546_08235 PF01266 FAD dependent oxidoreductase EI546_08235 PF00355 Rieske [2Fe-2S] domain EI546_08245 PF06965 Na+/H+ antiporter 1 EI546_08250 PF04228 Putative neutral zinc metallopeptidase EI546_08260 PF02222 ATP-grasp domain EI546_08260 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EI546_08270 PF00731 AIR carboxylase EI546_08280 PF01432 Peptidase family M3 EI546_08290 PF04151 Bacterial pre-peptidase C-terminal domain EI546_08290 PF04389 Peptidase family M28 EI546_08310 PF02347 Glycine cleavage system P-protein EI546_08315 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EI546_08315 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EI546_08330 PF00535 Glycosyl transferase family 2 EI546_08335 PF00245 Alkaline phosphatase EI546_08340 PF02405 Permease MlaE EI546_08345 PF00005 ABC transporter EI546_08355 PF00483 Nucleotidyl transferase EI546_08355 PF01050 Mannose-6-phosphate isomerase EI546_08380 PF02817 e3 binding domain EI546_08380 PF00364 Biotin-requiring enzyme EI546_08380 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EI546_08385 PF00676 Dehydrogenase E1 component EI546_08390 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EI546_08410 PF03781 Sulfatase-modifying factor enzyme 1 EI546_08415 PF08245 Mur ligase middle domain EI546_08415 PF01225 Mur ligase family, catalytic domain EI546_08415 PF02875 Mur ligase family, glutamate ligase domain EI546_08425 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EI546_08425 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EI546_08475 PF07690 Major Facilitator Superfamily EI546_08480 PF02875 Mur ligase family, glutamate ligase domain EI546_08480 PF08245 Mur ligase middle domain EI546_08495 PF02472 Biopolymer transport protein ExbD/TolR EI546_08500 PF01618 MotA/TolQ/ExbB proton channel family EI546_08505 PF03600 Citrate transporter EI546_08515 PF03702 Anhydro-N-acetylmuramic acid kinase EI546_08520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EI546_08520 PF02770 Acyl-CoA dehydrogenase, middle domain EI546_08520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EI546_08530 PF01351 Ribonuclease HII EI546_08550 PF03099 Biotin/lipoate A/B protein ligase family EI546_08570 PF01679 Proteolipid membrane potential modulator EI546_08575 PF00152 tRNA synthetases class II (D, K and N) EI546_08575 PF01336 OB-fold nucleic acid binding domain EI546_08590 PF00202 Aminotransferase class-III EI546_08595 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EI546_08595 PF13457 GW (Gly-Tryp) dipeptide domain EI546_08600 PF00291 Pyridoxal-phosphate dependent enzyme EI546_08610 PF00330 Aconitase family (aconitate hydratase) EI546_08610 PF00694 Aconitase C-terminal domain EI546_08625 PF01661 Macro domain EI546_08650 PF00282 Pyridoxal-dependent decarboxylase conserved domain EI546_08675 PF00873 AcrB/AcrD/AcrF family EI546_08680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EI546_08715 PF01734 Patatin-like phospholipase EI546_08725 PF00005 ABC transporter EI546_08725 PF12848 ABC transporter EI546_08725 PF16326 ABC transporter C-terminal domain EI546_08755 PF03781 Sulfatase-modifying factor enzyme 1 EI546_08760 PF00491 Arginase family EI546_08765 PF01131 DNA topoisomerase EI546_08765 PF01751 Toprim domain EI546_08765 PF13368 Topoisomerase C-terminal repeat EI546_08775 PF00886 Ribosomal protein S16 EI546_08780 PF01782 RimM N-terminal domain EI546_08785 PF05175 Methyltransferase small domain EI546_08795 PF02770 Acyl-CoA dehydrogenase, middle domain EI546_08795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EI546_08795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EI546_08805 PF00111 2Fe-2S iron-sulfur cluster binding domain EI546_08810 PF07992 Pyridine nucleotide-disulphide oxidoreductase EI546_08815 PF01521 Iron-sulphur cluster biosynthesis EI546_08815 PF01106 NifU-like domain EI546_08820 PF01883 Iron-sulfur cluster assembly protein EI546_08820 PF10609 NUBPL iron-transfer P-loop NTPase EI546_08825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EI546_08825 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EI546_08835 PF02390 Putative methyltransferase EI546_08840 PF04101 Glycosyltransferase family 28 C-terminal domain EI546_08840 PF03033 Glycosyltransferase family 28 N-terminal domain EI546_08845 PF16736 Single Cache-like EI546_08845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_08845 PF00989 PAS fold EI546_08845 PF00512 His Kinase A (phospho-acceptor) domain EI546_08850 PF00486 Transcriptional regulatory protein, C terminal EI546_08850 PF00072 Response regulator receiver domain EI546_09000 PF04298 Putative neutral zinc metallopeptidase EI546_09005 PF09334 tRNA synthetases class I (M) EI546_09005 PF13603 Leucyl-tRNA synthetase, Domain 2 EI546_09005 PF08264 Anticodon-binding domain of tRNA EI546_09010 PF18075 FtsX extracellular domain EI546_09020 PF02673 Bacitracin resistance protein BacA EI546_09050 PF01509 TruB family pseudouridylate synthase (N terminal domain) EI546_09060 PF00958 GMP synthase C terminal domain EI546_09060 PF03352 Methyladenine glycosylase EI546_09060 PF13673 Acetyltransferase (GNAT) domain EI546_09060 PF13302 Acetyltransferase (GNAT) domain EI546_09060 PF00117 Glutamine amidotransferase class-I EI546_09065 PF04371 Porphyromonas-type peptidyl-arginine deiminase EI546_09070 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EI546_09080 PF01613 Flavin reductase like domain EI546_09085 PF00512 His Kinase A (phospho-acceptor) domain EI546_09085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_09095 PF01230 HIT domain EI546_09100 PF01272 Transcription elongation factor, GreA/GreB, C-term EI546_09100 PF03449 Transcription elongation factor, N-terminal EI546_09115 PF00672 HAMP domain EI546_09115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_09115 PF00512 His Kinase A (phospho-acceptor) domain EI546_09115 PF01627 Hpt domain EI546_09115 PF00072 Response regulator receiver domain EI546_09115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EI546_09120 PF00072 Response regulator receiver domain EI546_09120 PF02954 Bacterial regulatory protein, Fis family EI546_09120 PF00158 Sigma-54 interaction domain EI546_09130 PF00472 RF-1 domain EI546_09130 PF03462 PCRF domain EI546_09155 PF01884 PcrB family EI546_09165 PF05221 S-adenosyl-L-homocysteine hydrolase EI546_09165 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EI546_09170 PF04480 Protein of unknown function (DUF559) EI546_09170 PF03852 DNA mismatch endonuclease Vsr EI546_09175 PF00155 Aminotransferase class I and II EI546_09180 PF01063 Amino-transferase class IV EI546_09190 PF01380 SIS domain EI546_09205 PF02569 Pantoate-beta-alanine ligase EI546_09210 PF02261 Aspartate decarboxylase EI546_09225 PF18073 Rubredoxin metal binding domain EI546_09230 PF00795 Carbon-nitrogen hydrolase EI546_09230 PF00583 Acetyltransferase (GNAT) family EI546_09240 PF01916 Deoxyhypusine synthase EI546_09245 PF00491 Arginase family EI546_09255 PF00849 RNA pseudouridylate synthase EI546_09255 PF01479 S4 domain EI546_09265 PF01712 Deoxynucleoside kinase EI546_09290 PF06689 ClpX C4-type zinc finger EI546_09290 PF07724 AAA domain (Cdc48 subfamily) EI546_09290 PF10431 C-terminal, D2-small domain, of ClpB protein EI546_09295 PF00574 Clp protease EI546_09300 PF05697 Bacterial trigger factor protein (TF) EI546_09300 PF05698 Bacterial trigger factor protein (TF) C-terminus EI546_09300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EI546_09315 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EI546_09320 PF12697 Alpha/beta hydrolase family EI546_09325 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EI546_09335 PF01513 ATP-NAD kinase EI546_09345 PF01255 Putative undecaprenyl diphosphate synthase EI546_09350 PF07244 Surface antigen variable number repeat EI546_09350 PF01103 Surface antigen EI546_09370 PF00132 Bacterial transferase hexapeptide (six repeats) EI546_09380 PF01106 NifU-like domain EI546_09390 PF03190 Protein of unknown function, DUF255 EI546_09395 PF00924 Mechanosensitive ion channel EI546_09395 PF05552 Conserved TM helix EI546_09415 PF00814 Glycoprotease family EI546_09420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EI546_09420 PF00529 HlyD membrane-fusion protein of T1SS EI546_09435 PF00005 ABC transporter EI546_09435 PF12704 MacB-like periplasmic core domain EI546_09435 PF02687 FtsX-like permease family EI546_09440 PF02687 FtsX-like permease family EI546_09440 PF12704 MacB-like periplasmic core domain EI546_09440 PF00005 ABC transporter EI546_09445 PF00005 ABC transporter EI546_09455 PF04238 Protein of unknown function (DUF420) EI546_09460 PF02630 SCO1/SenC EI546_09475 PF00510 Cytochrome c oxidase subunit III EI546_09480 PF00510 Cytochrome c oxidase subunit III EI546_09485 PF01040 UbiA prenyltransferase family EI546_09515 PF01597 Glycine cleavage H-protein EI546_09525 PF07499 RuvA, C-terminal domain EI546_09525 PF01330 RuvA N terminal domain EI546_09560 PF13495 Phage integrase, N-terminal SAM-like domain EI546_09560 PF00589 Phage integrase family EI546_09570 PF01381 Helix-turn-helix EI546_09605 PF00589 Phage integrase family EI546_09605 PF13495 Phage integrase, N-terminal SAM-like domain EI546_09615 PF01381 Helix-turn-helix EI546_09695 PF00390 Malic enzyme, N-terminal domain EI546_09695 PF03949 Malic enzyme, NAD binding domain EI546_09695 PF01515 Phosphate acetyl/butaryl transferase EI546_09705 PF08331 Domain of unknown function (DUF1730) EI546_09710 PF17864 RuvB AAA lid domain EI546_09710 PF05491 RuvB C-terminal winged helix domain EI546_09710 PF05496 Holliday junction DNA helicase RuvB P-loop domain EI546_09715 PF00115 Cytochrome C and Quinol oxidase polypeptide I EI546_09720 PF06481 COX Aromatic Rich Motif EI546_09720 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EI546_09730 PF13360 PQQ-like domain EI546_09730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EI546_09740 PF00318 Ribosomal protein S2 EI546_09745 PF13247 4Fe-4S dicluster domain EI546_09745 PF00037 4Fe-4S binding domain EI546_09760 PF08281 Sigma-70, region 4 EI546_09760 PF04542 Sigma-70 region 2 EI546_09765 PF00127 Copper binding proteins, plastocyanin/azurin family EI546_09785 PF00512 His Kinase A (phospho-acceptor) domain EI546_09785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_09790 PF00486 Transcriptional regulatory protein, C terminal EI546_09790 PF00072 Response regulator receiver domain EI546_09795 PF11987 Translation-initiation factor 2 EI546_09795 PF00009 Elongation factor Tu GTP binding domain EI546_09795 PF04760 Translation initiation factor IF-2, N-terminal region EI546_09800 PF08529 NusA N-terminal domain EI546_09800 PF13184 NusA-like KH domain EI546_09800 PF00575 S1 RNA binding domain EI546_09805 PF02576 RimP N-terminal domain EI546_09810 PF00582 Universal stress protein family EI546_09820 PF08264 Anticodon-binding domain of tRNA EI546_09820 PF00133 tRNA synthetases class I (I, L, M and V) EI546_09825 PF13194 Domain of unknown function (DUF4010) EI546_09835 PF02683 Cytochrome C biogenesis protein transmembrane region EI546_09835 PF11412 Disulphide bond corrector protein DsbC EI546_09835 PF00085 Thioredoxin EI546_09860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_09860 PF00512 His Kinase A (phospho-acceptor) domain EI546_09860 PF00989 PAS fold EI546_09860 PF08447 PAS fold EI546_09865 PF00158 Sigma-54 interaction domain EI546_09865 PF00072 Response regulator receiver domain EI546_09865 PF02954 Bacterial regulatory protein, Fis family EI546_09875 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EI546_09875 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EI546_09880 PF03449 Transcription elongation factor, N-terminal EI546_09880 PF01272 Transcription elongation factor, GreA/GreB, C-term EI546_09890 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EI546_09890 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EI546_09895 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EI546_09895 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EI546_09895 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EI546_09900 PF02233 NAD(P) transhydrogenase beta subunit EI546_09905 PF03601 Conserved hypothetical protein 698 EI546_09915 PF05552 Conserved TM helix EI546_09915 PF00924 Mechanosensitive ion channel EI546_09930 PF00999 Sodium/hydrogen exchanger family EI546_09930 PF00582 Universal stress protein family EI546_09945 PF00106 short chain dehydrogenase EI546_09950 PF00107 Zinc-binding dehydrogenase EI546_09950 PF08240 Alcohol dehydrogenase GroES-like domain EI546_09995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EI546_10005 PF12833 Helix-turn-helix domain EI546_10035 PF16363 GDP-mannose 4,6 dehydratase EI546_10050 PF00576 HIUase/Transthyretin family EI546_10065 PF08534 Redoxin EI546_10075 PF00593 TonB dependent receptor EI546_10075 PF07715 TonB-dependent Receptor Plug Domain EI546_10095 PF00317 Ribonucleotide reductase, all-alpha domain EI546_10095 PF02867 Ribonucleotide reductase, barrel domain EI546_10095 PF03477 ATP cone domain EI546_10100 PF03477 ATP cone domain EI546_10100 PF13597 Anaerobic ribonucleoside-triphosphate reductase EI546_10145 PF02163 Peptidase family M50 EI546_10145 PF13180 PDZ domain EI546_10150 PF11838 ERAP1-like C-terminal domain EI546_10150 PF01433 Peptidase family M1 domain EI546_10155 PF02630 SCO1/SenC EI546_10165 PF07670 Nucleoside recognition EI546_10165 PF02421 Ferrous iron transport protein B EI546_10165 PF07664 Ferrous iron transport protein B C terminus EI546_10175 PF01566 Natural resistance-associated macrophage protein EI546_10180 PF00950 ABC 3 transport family EI546_10185 PF00950 ABC 3 transport family EI546_10190 PF00005 ABC transporter EI546_10195 PF01297 Zinc-uptake complex component A periplasmic EI546_10200 PF00950 ABC 3 transport family EI546_10200 PF02742 Iron dependent repressor, metal binding and dimerisation domain EI546_10205 PF07715 TonB-dependent Receptor Plug Domain EI546_10205 PF00593 TonB dependent receptor EI546_10220 PF00226 DnaJ domain EI546_10220 PF00684 DnaJ central domain EI546_10220 PF01556 DnaJ C terminal domain EI546_10225 PF06491 Disulphide isomerase EI546_10240 PF01966 HD domain EI546_10255 PF00326 Prolyl oligopeptidase family EI546_10275 PF00654 Voltage gated chloride channel EI546_10305 PF07885 Ion channel EI546_10310 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EI546_10310 PF11867 Domain of unknown function (DUF3387) EI546_10310 PF18766 SWI2/SNF2 ATPase EI546_10340 PF02384 N-6 DNA Methylase EI546_10345 PF04055 Radical SAM superfamily EI546_10350 PF00011 Hsp20/alpha crystallin family EI546_10360 PF00378 Enoyl-CoA hydratase/isomerase EI546_10370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_10370 PF00672 HAMP domain EI546_10370 PF00512 His Kinase A (phospho-acceptor) domain EI546_10370 PF00989 PAS fold EI546_10390 PF00762 Ferrochelatase EI546_10400 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EI546_10400 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EI546_10400 PF01488 Shikimate / quinate 5-dehydrogenase EI546_10405 PF03900 Porphobilinogen deaminase, C-terminal domain EI546_10405 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EI546_10410 PF02386 Cation transport protein EI546_10425 PF01208 Uroporphyrinogen decarboxylase (URO-D) EI546_10440 PF00970 Oxidoreductase FAD-binding domain EI546_10440 PF00175 Oxidoreductase NAD-binding domain EI546_10440 PF00111 2Fe-2S iron-sulfur cluster binding domain EI546_10465 PF00119 ATP synthase A chain EI546_10470 PF00137 ATP synthase subunit C EI546_10475 PF00430 ATP synthase B/B' CF(0) EI546_10480 PF00213 ATP synthase delta (OSCP) subunit EI546_10485 PF02874 ATP synthase alpha/beta family, beta-barrel domain EI546_10485 PF00306 ATP synthase alpha/beta chain, C terminal domain EI546_10485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EI546_10495 PF00231 ATP synthase EI546_10505 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EI546_10505 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EI546_10515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EI546_10515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EI546_10520 PF00106 short chain dehydrogenase EI546_10525 PF00535 Glycosyl transferase family 2 EI546_10560 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EI546_10565 PF00005 ABC transporter EI546_10565 PF00664 ABC transporter transmembrane region EI546_10585 PF01883 Iron-sulfur cluster assembly protein EI546_10590 PF02657 Fe-S metabolism associated domain EI546_10595 PF00266 Aminotransferase class-V EI546_10600 PF01458 Uncharacterized protein family (UPF0051) EI546_10605 PF00005 ABC transporter EI546_10615 PF01458 Uncharacterized protein family (UPF0051) EI546_10620 PF01521 Iron-sulphur cluster biosynthesis EI546_10625 PF02769 AIR synthase related protein, C-terminal domain EI546_10625 PF00586 AIR synthase related protein, N-terminal domain EI546_10630 PF00561 alpha/beta hydrolase fold EI546_10630 PF08386 TAP-like protein EI546_10635 PF05195 Aminopeptidase P, N-terminal domain EI546_10635 PF00557 Metallopeptidase family M24 EI546_10640 PF03129 Anticodon binding domain EI546_10650 PF00156 Phosphoribosyl transferase domain EI546_10660 PF00795 Carbon-nitrogen hydrolase EI546_10675 PF00154 recA bacterial DNA recombination protein EI546_10685 PF04468 PSP1 C-terminal conserved region EI546_10690 PF14109 GldH lipoprotein EI546_10695 PF00905 Penicillin binding protein transpeptidase domain EI546_10695 PF00912 Transglycosylase EI546_10700 PF01144 Coenzyme A transferase EI546_10705 PF01144 Coenzyme A transferase EI546_10710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EI546_10710 PF00005 ABC transporter EI546_10715 PF07504 Fungalysin/Thermolysin Propeptide Motif EI546_10715 PF01447 Thermolysin metallopeptidase, catalytic domain EI546_10715 PF02868 Thermolysin metallopeptidase, alpha-helical domain EI546_10715 PF03413 Peptidase propeptide and YPEB domain EI546_10730 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EI546_10730 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EI546_10750 PF00490 Delta-aminolevulinic acid dehydratase EI546_10755 PF01218 Coproporphyrinogen III oxidase EI546_10770 PF02086 D12 class N6 adenine-specific DNA methyltransferase EI546_10805 PF02843 Phosphoribosylglycinamide synthetase, C domain EI546_10805 PF02844 Phosphoribosylglycinamide synthetase, N domain EI546_10805 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EI546_10810 PF13193 AMP-binding enzyme C-terminal domain EI546_10810 PF00501 AMP-binding enzyme EI546_10815 PF00535 Glycosyl transferase family 2 EI546_10820 PF02397 Bacterial sugar transferase EI546_10825 PF01370 NAD dependent epimerase/dehydratase family EI546_10835 PF03808 Glycosyl transferase WecB/TagA/CpsF family EI546_10845 PF00132 Bacterial transferase hexapeptide (six repeats) EI546_10845 PF12464 Maltose acetyltransferase EI546_10850 PF13439 Glycosyltransferase Family 4 EI546_10850 PF00534 Glycosyl transferases group 1 EI546_10855 PF00733 Asparagine synthase EI546_10855 PF13537 Glutamine amidotransferase domain EI546_10880 PF00535 Glycosyl transferase family 2 EI546_10900 PF00534 Glycosyl transferases group 1 EI546_10900 PF13439 Glycosyltransferase Family 4 EI546_10910 PF04321 RmlD substrate binding domain EI546_10915 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EI546_10920 PF00483 Nucleotidyl transferase EI546_10935 PF16363 GDP-mannose 4,6 dehydratase EI546_10950 PF01476 LysM domain EI546_10950 PF01551 Peptidase family M23 EI546_10955 PF02416 mttA/Hcf106 family EI546_10965 PF01476 LysM domain EI546_10965 PF01464 Transglycosylase SLT domain EI546_10970 PF00162 Phosphoglycerate kinase EI546_10985 PF13932 GidA associated domain EI546_10985 PF01134 Glucose inhibited division protein A EI546_10990 PF02130 Uncharacterized protein family UPF0054 EI546_11000 PF00749 tRNA synthetases class I (E and Q), catalytic domain EI546_11015 PF00589 Phage integrase family EI546_11015 PF02899 Phage integrase, N-terminal SAM-like domain EI546_11115 PF00872 Transposase, Mutator family EI546_11125 PF01842 ACT domain EI546_11125 PF00696 Amino acid kinase family EI546_11135 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EI546_11140 PF07396 Phosphate-selective porin O and P EI546_11155 PF00571 CBS domain EI546_11155 PF01769 Divalent cation transporter EI546_11155 PF03448 MgtE intracellular N domain EI546_11160 PF00398 Ribosomal RNA adenine dimethylase EI546_11185 PF01914 MarC family integral membrane protein EI546_11195 PF03572 Peptidase family S41 EI546_11195 PF13180 PDZ domain EI546_11215 PF12805 FUSC-like inner membrane protein yccS EI546_11225 PF00912 Transglycosylase EI546_11235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EI546_11235 PF00289 Biotin carboxylase, N-terminal domain EI546_11235 PF02785 Biotin carboxylase C-terminal domain EI546_11240 PF00364 Biotin-requiring enzyme EI546_11245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EI546_11245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EI546_11250 PF01783 Ribosomal L32p protein family EI546_11260 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EI546_11265 PF00677 Lumazine binding domain EI546_11270 PF01609 Transposase DDE domain EI546_11310 PF02033 Ribosome-binding factor A EI546_11315 PF02687 FtsX-like permease family EI546_11315 PF12704 MacB-like periplasmic core domain EI546_11325 PF01207 Dihydrouridine synthase (Dus) EI546_11335 PF03144 Elongation factor Tu domain 2 EI546_11335 PF00009 Elongation factor Tu GTP binding domain EI546_11335 PF00679 Elongation factor G C-terminus EI546_11335 PF06421 GTP-binding protein LepA C-terminus EI546_11345 PF02080 TrkA-C domain EI546_11345 PF00999 Sodium/hydrogen exchanger family EI546_11345 PF03471 Transporter associated domain EI546_11350 PF00753 Metallo-beta-lactamase superfamily EI546_11355 PF00082 Subtilase family EI546_11365 PF00825 Ribonuclease P EI546_11370 PF03572 Peptidase family S41 EI546_11370 PF13180 PDZ domain EI546_11385 PF13673 Acetyltransferase (GNAT) domain EI546_11390 PF02502 Ribose/Galactose Isomerase EI546_11400 PF00773 RNB domain EI546_11400 PF17876 Cold shock domain EI546_11400 PF08206 Ribonuclease B OB domain EI546_11400 PF00575 S1 RNA binding domain EI546_11415 PF02152 Dihydroneopterin aldolase EI546_11420 PF00749 tRNA synthetases class I (E and Q), catalytic domain EI546_11420 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EI546_11445 PF00005 ABC transporter EI546_11460 PF01381 Helix-turn-helix EI546_11465 PF05973 Phage derived protein Gp49-like (DUF891) EI546_11475 PF13443 Cro/C1-type HTH DNA-binding domain EI546_11535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EI546_11535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EI546_11550 PF00149 Calcineurin-like phosphoesterase EI546_11565 PF00106 short chain dehydrogenase EI546_11570 PF07726 ATPase family associated with various cellular activities (AAA) EI546_11570 PF17863 AAA lid domain EI546_11575 PF01882 Protein of unknown function DUF58 EI546_11585 PF13519 von Willebrand factor type A domain EI546_11610 PF00155 Aminotransferase class I and II EI546_11615 PF00691 OmpA family EI546_11615 PF13488 Glycine zipper EI546_11630 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EI546_11630 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EI546_11645 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EI546_11645 PF01409 tRNA synthetases class II core domain (F) EI546_11655 PF00005 ABC transporter EI546_11655 PF08402 TOBE domain EI546_11660 PF13396 Phospholipase_D-nuclease N-terminal EI546_11660 PF13091 PLD-like domain EI546_11670 PF14572 Phosphoribosyl synthetase-associated domain EI546_11670 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EI546_11675 PF01368 DHH family EI546_11675 PF02272 DHHA1 domain EI546_11675 PF17768 RecJ OB domain EI546_11675 PF10141 Single-strand DNA-specific exonuclease, C terminal domain EI546_11680 PF00149 Calcineurin-like phosphoesterase EI546_11685 PF01242 6-pyruvoyl tetrahydropterin synthase EI546_11710 PF04241 Protein of unknown function (DUF423) EI546_11715 PF01293 Phosphoenolpyruvate carboxykinase EI546_11730 PF00535 Glycosyl transferase family 2 EI546_11735 PF01979 Amidohydrolase family EI546_11750 PF00579 tRNA synthetases class I (W and Y) EI546_11755 PF02874 ATP synthase alpha/beta family, beta-barrel domain EI546_11755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EI546_11760 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EI546_11780 PF13443 Cro/C1-type HTH DNA-binding domain EI546_11800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EI546_11805 PF00271 Helicase conserved C-terminal domain EI546_11805 PF02559 CarD-like/TRCF domain EI546_11805 PF17757 UvrB interaction domain EI546_11805 PF03461 TRCF domain EI546_11805 PF00270 DEAD/DEAH box helicase EI546_11830 PF02021 Uncharacterised protein family UPF0102 EI546_11845 PF17676 LD-carboxypeptidase C-terminal domain EI546_11845 PF02016 LD-carboxypeptidase N-terminal domain EI546_11850 PF01588 Putative tRNA binding domain EI546_11850 PF08264 Anticodon-binding domain of tRNA EI546_11850 PF09334 tRNA synthetases class I (M) EI546_11870 PF00575 S1 RNA binding domain EI546_11870 PF16921 Tex protein YqgF-like domain EI546_11870 PF09371 Tex-like protein N-terminal domain EI546_11870 PF17674 HHH domain EI546_11910 PF00575 S1 RNA binding domain EI546_11910 PF10150 Ribonuclease E/G family EI546_11915 PF00216 Bacterial DNA-binding protein EI546_11920 PF00730 HhH-GPD superfamily base excision DNA repair protein EI546_11920 PF14815 NUDIX domain EI546_11925 PF00436 Single-strand binding protein family EI546_11930 PF00571 CBS domain EI546_11930 PF03471 Transporter associated domain EI546_11940 PF00675 Insulinase (Peptidase family M16) EI546_11940 PF05193 Peptidase M16 inactive domain EI546_11945 PF00675 Insulinase (Peptidase family M16) EI546_11945 PF05193 Peptidase M16 inactive domain EI546_11955 PF00829 Ribosomal prokaryotic L21 protein EI546_11960 PF01016 Ribosomal L27 protein EI546_11975 PF13085 2Fe-2S iron-sulfur cluster binding domain EI546_11980 PF02910 Fumarate reductase flavoprotein C-term EI546_11980 PF00890 FAD binding domain EI546_12010 PF03372 Endonuclease/Exonuclease/phosphatase family EI546_12015 PF00171 Aldehyde dehydrogenase family EI546_12030 PF06052 3-hydroxyanthranilic acid dioxygenase EI546_12035 PF01112 Asparaginase EI546_12040 PF07703 Alpha-2-macroglobulin bait region domain EI546_12040 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain EI546_12040 PF01835 MG2 domain EI546_12040 PF11974 Bacterial alpha-2-macroglobulin MG3 domain EI546_12040 PF00207 Alpha-2-macroglobulin family EI546_12040 PF17962 Bacterial macroglobulin domain 6 EI546_12040 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain EI546_12045 PF01541 GIY-YIG catalytic domain EI546_12050 PF06832 Penicillin-Binding Protein C-terminus Family EI546_12050 PF00912 Transglycosylase EI546_12050 PF00905 Penicillin binding protein transpeptidase domain EI546_12070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EI546_12075 PF00873 AcrB/AcrD/AcrF family EI546_12080 PF02321 Outer membrane efflux protein EI546_12090 PF02838 Glycosyl hydrolase family 20, domain 2 EI546_12090 PF07691 PA14 domain EI546_12090 PF00728 Glycosyl hydrolase family 20, catalytic domain EI546_12095 PF03932 CutC family EI546_12105 PF09997 Predicted membrane protein (DUF2238) EI546_12120 PF00817 impB/mucB/samB family EI546_12120 PF11799 impB/mucB/samB family C-terminal domain EI546_12130 PF00224 Pyruvate kinase, barrel domain EI546_12130 PF00391 PEP-utilising enzyme, mobile domain EI546_12130 PF02887 Pyruvate kinase, alpha/beta domain EI546_12140 PF14622 Ribonuclease-III-like EI546_12140 PF00035 Double-stranded RNA binding motif EI546_12145 PF00109 Beta-ketoacyl synthase, N-terminal domain EI546_12145 PF02801 Beta-ketoacyl synthase, C-terminal domain EI546_12150 PF00550 Phosphopantetheine attachment site EI546_12155 PF00551 Formyl transferase EI546_12160 PF01693 Caulimovirus viroplasmin EI546_12170 PF00156 Phosphoribosyl transferase domain EI546_12180 PF00579 tRNA synthetases class I (W and Y) EI546_12200 PF00483 Nucleotidyl transferase EI546_12205 PF00692 dUTPase EI546_12215 PF02403 Seryl-tRNA synthetase N-terminal domain EI546_12215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EI546_12225 PF06574 FAD synthetase EI546_12225 PF01687 Riboflavin kinase EI546_12230 PF01195 Peptidyl-tRNA hydrolase EI546_12235 PF14693 Ribosomal protein TL5, C-terminal domain EI546_12235 PF01386 Ribosomal L25p family EI546_12240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EI546_12250 PF00265 Thymidine kinase EI546_12255 PF01168 Alanine racemase, N-terminal domain EI546_12255 PF00842 Alanine racemase, C-terminal domain EI546_12260 PF01741 Large-conductance mechanosensitive channel, MscL EI546_12265 PF08239 Bacterial SH3 domain EI546_12265 PF01520 N-acetylmuramoyl-L-alanine amidase EI546_12270 PF01118 Semialdehyde dehydrogenase, NAD binding domain EI546_12270 PF02774 Semialdehyde dehydrogenase, dimerisation domain EI546_12280 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EI546_12280 PF00326 Prolyl oligopeptidase family EI546_12290 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EI546_12290 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EI546_12300 PF01467 Cytidylyltransferase-like EI546_12305 PF00625 Guanylate kinase EI546_12310 PF03755 YicC-like family, N-terminal region EI546_12310 PF08340 Domain of unknown function (DUF1732) EI546_12340 PF01053 Cys/Met metabolism PLP-dependent enzyme EI546_12355 PF02565 Recombination protein O C terminal EI546_12355 PF11967 Recombination protein O N terminal EI546_12360 PF00210 Ferritin-like domain EI546_12365 PF00583 Acetyltransferase (GNAT) family EI546_12375 PF01272 Transcription elongation factor, GreA/GreB, C-term EI546_12375 PF03449 Transcription elongation factor, N-terminal EI546_12380 PF00144 Beta-lactamase EI546_12385 PF01168 Alanine racemase, N-terminal domain EI546_12395 PF01370 NAD dependent epimerase/dehydratase family EI546_12405 PF05649 Peptidase family M13 EI546_12405 PF01431 Peptidase family M13 EI546_12420 PF00478 IMP dehydrogenase / GMP reductase domain EI546_12420 PF00571 CBS domain EI546_12435 PF00436 Single-strand binding protein family EI546_12440 PF01541 GIY-YIG catalytic domain EI546_12445 PF09382 RQC domain EI546_12445 PF00271 Helicase conserved C-terminal domain EI546_12445 PF16124 RecQ zinc-binding EI546_12445 PF00570 HRDC domain EI546_12445 PF00270 DEAD/DEAH box helicase EI546_12460 PF08281 Sigma-70, region 4 EI546_12460 PF04542 Sigma-70 region 2 EI546_12475 PF01136 Peptidase family U32 EI546_12490 PF00271 Helicase conserved C-terminal domain EI546_12490 PF08494 DEAD/H associated EI546_12490 PF00270 DEAD/DEAH box helicase EI546_12495 PF04480 Protein of unknown function (DUF559) EI546_12500 PF01068 ATP dependent DNA ligase domain EI546_12500 PF04675 DNA ligase N terminus EI546_12500 PF04679 ATP dependent DNA ligase C terminal region EI546_12515 PF13286 Phosphohydrolase-associated domain EI546_12515 PF01966 HD domain EI546_12520 PF13860 FlgD Ig-like domain EI546_12520 PF05922 Peptidase inhibitor I9 EI546_12520 PF02225 PA domain EI546_12520 PF00082 Subtilase family EI546_12525 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EI546_12525 PF02779 Transketolase, pyrimidine binding domain EI546_12525 PF02780 Transketolase, C-terminal domain EI546_12530 PF14437 MafB19-like deaminase EI546_12535 PF00313 'Cold-shock' DNA-binding domain EI546_12545 PF01336 OB-fold nucleic acid binding domain EI546_12545 PF00152 tRNA synthetases class II (D, K and N) EI546_12545 PF02938 GAD domain EI546_12550 PF00873 AcrB/AcrD/AcrF family EI546_12555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EI546_12555 PF00529 HlyD membrane-fusion protein of T1SS EI546_12580 PF02779 Transketolase, pyrimidine binding domain EI546_12580 PF16870 2-oxoglutarate dehydrogenase C-terminal EI546_12580 PF16078 2-oxoglutarate dehydrogenase N-terminus EI546_12580 PF00676 Dehydrogenase E1 component EI546_12585 PF02817 e3 binding domain EI546_12585 PF00364 Biotin-requiring enzyme EI546_12585 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EI546_12590 PF00196 Bacterial regulatory proteins, luxR family EI546_12590 PF00072 Response regulator receiver domain EI546_12595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_12595 PF07730 Histidine kinase EI546_12605 PF01026 TatD related DNase EI546_12610 PF00710 Asparaginase, N-terminal EI546_12610 PF17763 Glutaminase/Asparaginase C-terminal domain EI546_12620 PF01618 MotA/TolQ/ExbB proton channel family EI546_12650 PF00309 Sigma-54 factor, Activator interacting domain (AID) EI546_12650 PF04552 Sigma-54, DNA binding domain EI546_12650 PF04963 Sigma-54 factor, core binding domain EI546_12655 PF00152 tRNA synthetases class II (D, K and N) EI546_12655 PF01336 OB-fold nucleic acid binding domain EI546_12670 PF01765 Ribosome recycling factor EI546_12675 PF00696 Amino acid kinase family EI546_12680 PF01464 Transglycosylase SLT domain EI546_12680 PF10145 Phage-related minor tail protein EI546_12680 PF01551 Peptidase family M23 EI546_12735 PF00889 Elongation factor TS EI546_12740 PF00318 Ribosomal protein S2 EI546_12745 PF00380 Ribosomal protein S9/S16 EI546_12750 PF00572 Ribosomal protein L13 EI546_12755 PF00682 HMGL-like EI546_12755 PF02785 Biotin carboxylase C-terminal domain EI546_12755 PF00289 Biotin carboxylase, N-terminal domain EI546_12755 PF00364 Biotin-requiring enzyme EI546_12755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EI546_12755 PF02436 Conserved carboxylase domain EI546_12790 PF00476 DNA polymerase family A EI546_12790 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EI546_12790 PF01367 5'-3' exonuclease, C-terminal SAM fold EI546_12790 PF01612 3'-5' exonuclease EI546_12795 PF01112 Asparaginase EI546_12835 PF07690 Major Facilitator Superfamily EI546_12840 PF01112 Asparaginase EI546_12845 PF07971 Glycosyl hydrolase family 92 EI546_12845 PF17678 Glycosyl hydrolase family 92 N-terminal domain EI546_12850 PF00149 Calcineurin-like phosphoesterase EI546_12850 PF10518 TAT (twin-arginine translocation) pathway signal sequence EI546_12855 PF00085 Thioredoxin EI546_12860 PF01522 Polysaccharide deacetylase EI546_12880 PF01850 PIN domain EI546_12890 PF00144 Beta-lactamase EI546_12895 PF01252 Signal peptidase (SPase) II EI546_12910 PF01812 5-formyltetrahydrofolate cyclo-ligase family EI546_12920 PF18030 RimK PreATP-grasp domain EI546_12920 PF08443 RimK-like ATP-grasp domain EI546_12925 PF18030 RimK PreATP-grasp domain EI546_12925 PF08443 RimK-like ATP-grasp domain EI546_12930 PF18030 RimK PreATP-grasp domain EI546_12930 PF08443 RimK-like ATP-grasp domain EI546_12935 PF03061 Thioesterase superfamily EI546_12945 PF02481 DNA recombination-mediator protein A EI546_12950 PF02151 UvrB/uvrC motif EI546_12950 PF08459 UvrC Helix-hairpin-helix N-terminal EI546_12950 PF01541 GIY-YIG catalytic domain EI546_12955 PF00027 Cyclic nucleotide-binding domain EI546_12955 PF01734 Patatin-like phospholipase EI546_12965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EI546_12975 PF08460 Bacterial SH3 domain EI546_12975 PF01551 Peptidase family M23 EI546_13005 PF00691 OmpA family EI546_13005 PF01389 OmpA-like transmembrane domain EI546_13020 PF01926 50S ribosome-binding GTPase EI546_13020 PF13167 GTP-binding GTPase N-terminal EI546_13020 PF16360 GTP-binding GTPase Middle Region EI546_13025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EI546_13025 PF02770 Acyl-CoA dehydrogenase, middle domain EI546_13025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EI546_13050 PF00118 TCP-1/cpn60 chaperonin family EI546_13055 PF00166 Chaperonin 10 Kd subunit EI546_13075 PF00158 Sigma-54 interaction domain EI546_13080 PF04055 Radical SAM superfamily EI546_13080 PF00919 Uncharacterized protein family UPF0004 EI546_13080 PF01938 TRAM domain EI546_13085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EI546_13085 PF02811 PHP domain EI546_13085 PF01336 OB-fold nucleic acid binding domain EI546_13085 PF14579 Helix-hairpin-helix motif EI546_13085 PF07733 Bacterial DNA polymerase III alpha NTPase domain EI546_13090 PF00085 Thioredoxin EI546_13095 PF00574 Clp protease EI546_13100 PF17185 NlpE C-terminal OB domain EI546_13100 PF04170 NlpE N-terminal domain EI546_13120 PF12161 HsdM N-terminal domain EI546_13120 PF02384 N-6 DNA Methylase EI546_13155 PF00580 UvrD/REP helicase N-terminal domain EI546_13155 PF13361 UvrD-like helicase C-terminal domain EI546_13165 PF01226 Formate/nitrite transporter EI546_13175 PF00905 Penicillin binding protein transpeptidase domain EI546_13175 PF05569 BlaR1 peptidase M56 EI546_13190 PF08274 PhnA Zinc-Ribbon EI546_13190 PF03831 PhnA domain EI546_13240 PF02075 Crossover junction endodeoxyribonuclease RuvC EI546_13245 PF00520 Ion transport protein EI546_13245 PF00027 Cyclic nucleotide-binding domain EI546_13250 PF04055 Radical SAM superfamily EI546_13250 PF06969 HemN C-terminal domain EI546_13265 PF04237 YjbR EI546_13270 PF05188 MutS domain II EI546_13270 PF05192 MutS domain III EI546_13270 PF05190 MutS family domain IV EI546_13270 PF00488 MutS domain V EI546_13270 PF01624 MutS domain I EI546_13290 PF00873 AcrB/AcrD/AcrF family EI546_13300 PF00529 HlyD membrane-fusion protein of T1SS EI546_13300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EI546_13310 PF18719 ArlS sensor domain EI546_13310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_13310 PF00512 His Kinase A (phospho-acceptor) domain EI546_13315 PF00072 Response regulator receiver domain EI546_13315 PF00486 Transcriptional regulatory protein, C terminal EI546_13335 PF02028 BCCT, betaine/carnitine/choline family transporter EI546_13350 PF00296 Luciferase-like monooxygenase EI546_13355 PF01139 tRNA-splicing ligase RtcB EI546_13440 PF08032 RNA 2'-O ribose methyltransferase substrate binding EI546_13440 PF00588 SpoU rRNA Methylase family EI546_13445 PF01624 MutS domain I EI546_13445 PF00488 MutS domain V EI546_13445 PF05190 MutS family domain IV EI546_13445 PF05192 MutS domain III EI546_13445 PF05188 MutS domain II EI546_13460 PF12008 Type I restriction and modification enzyme - subunit R C terminal EI546_13460 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EI546_13460 PF18766 SWI2/SNF2 ATPase EI546_13470 PF01420 Type I restriction modification DNA specificity domain EI546_13475 PF13784 Fic/DOC family N-terminal EI546_13475 PF02661 Fic/DOC family EI546_13480 PF02384 N-6 DNA Methylase EI546_13480 PF12161 HsdM N-terminal domain EI546_13485 PF13676 TIR domain EI546_13505 PF16697 Inner membrane component of T3SS, cytoplasmic domain EI546_13515 PF00364 Biotin-requiring enzyme EI546_13515 PF02780 Transketolase, C-terminal domain EI546_13515 PF02779 Transketolase, pyrimidine binding domain EI546_13530 PF07730 Histidine kinase EI546_13550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EI546_13555 PF00296 Luciferase-like monooxygenase EI546_13560 PF00571 CBS domain EI546_13565 PF13419 Haloacid dehalogenase-like hydrolase EI546_13575 PF11490 DNA polymerase III polC-type N-terminus II EI546_13575 PF14480 DNA polymerase III polC-type N-terminus I EI546_13575 PF07733 Bacterial DNA polymerase III alpha NTPase domain EI546_13575 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EI546_13575 PF14579 Helix-hairpin-helix motif EI546_13575 PF02811 PHP domain EI546_13575 PF00929 Exonuclease EI546_13590 PF02735 Ku70/Ku80 beta-barrel domain EI546_13595 PF13298 DNA polymerase Ligase (LigD) EI546_13595 PF01068 ATP dependent DNA ligase domain EI546_13595 PF04679 ATP dependent DNA ligase C terminal region EI546_13630 PF00348 Polyprenyl synthetase EI546_13635 PF01494 FAD binding domain EI546_13650 PF00691 OmpA family EI546_13650 PF13677 Membrane MotB of proton-channel complex MotA/MotB EI546_13665 PF01709 Transcriptional regulator EI546_13690 PF00271 Helicase conserved C-terminal domain EI546_13690 PF04851 Type III restriction enzyme, res subunit EI546_13695 PF00293 NUDIX domain EI546_13700 PF06827 Zinc finger found in FPG and IleRS EI546_13700 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EI546_13700 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EI546_13725 PF00005 ABC transporter EI546_13740 PF13416 Bacterial extracellular solute-binding protein EI546_13780 PF05552 Conserved TM helix EI546_13780 PF00924 Mechanosensitive ion channel EI546_13785 PF13520 Amino acid permease EI546_13790 PF08241 Methyltransferase domain EI546_13800 PF00368 Hydroxymethylglutaryl-coenzyme A reductase EI546_13805 PF17070 30S ribosomal protein Thx EI546_13810 PF00117 Glutamine amidotransferase class-I EI546_13810 PF02885 Glycosyl transferase family, helical bundle domain EI546_13810 PF00591 Glycosyl transferase family, a/b domain EI546_13815 PF00581 Rhodanese-like domain EI546_13855 PF03485 Arginyl tRNA synthetase N terminal domain EI546_13855 PF05746 DALR anticodon binding domain EI546_13855 PF00750 tRNA synthetases class I (R) EI546_13865 PF00484 Carbonic anhydrase EI546_13870 PF07676 WD40-like Beta Propeller Repeat EI546_13880 PF04542 Sigma-70 region 2 EI546_13880 PF08281 Sigma-70, region 4 EI546_13890 PF00271 Helicase conserved C-terminal domain EI546_13890 PF00270 DEAD/DEAH box helicase EI546_13930 PF00171 Aldehyde dehydrogenase family EI546_13935 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EI546_13935 PF00326 Prolyl oligopeptidase family EI546_13950 PF00893 Small Multidrug Resistance protein EI546_13955 PF00248 Aldo/keto reductase family EI546_13960 PF00448 SRP54-type protein, GTPase domain EI546_13960 PF02978 Signal peptide binding domain EI546_13960 PF02881 SRP54-type protein, helical bundle domain EI546_13970 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EI546_13970 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EI546_13975 PF06803 Protein of unknown function (DUF1232) EI546_14005 PF05872 Bacterial protein of unknown function (DUF853) EI546_14010 PF04055 Radical SAM superfamily EI546_14020 PF00204 DNA gyrase B EI546_14020 PF01751 Toprim domain EI546_14020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_14020 PF00986 DNA gyrase B subunit, carboxyl terminus EI546_14030 PF00056 lactate/malate dehydrogenase, NAD binding domain EI546_14030 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EI546_14035 PF00535 Glycosyl transferase family 2 EI546_14050 PF01048 Phosphorylase superfamily EI546_14075 PF02627 Carboxymuconolactone decarboxylase family EI546_14085 PF01609 Transposase DDE domain EI546_14090 PF04343 Protein of unknown function, DUF488 EI546_14095 PF03301 Tryptophan 2,3-dioxygenase EI546_14100 PF09312 SurA N-terminal domain EI546_14100 PF00639 PPIC-type PPIASE domain EI546_14105 PF03471 Transporter associated domain EI546_14105 PF00571 CBS domain EI546_14130 PF03309 Type III pantothenate kinase EI546_14140 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family EI546_14145 PF00719 Inorganic pyrophosphatase EI546_14150 PF03030 Inorganic H+ pyrophosphatase EI546_14165 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EI546_14170 PF00171 Aldehyde dehydrogenase family EI546_14170 PF01575 MaoC like domain EI546_14185 PF03109 ABC1 family EI546_14190 PF13593 SBF-like CPA transporter family (DUF4137) EI546_14195 PF00258 Flavodoxin EI546_14210 PF00132 Bacterial transferase hexapeptide (six repeats) EI546_14220 PF02817 e3 binding domain EI546_14220 PF00364 Biotin-requiring enzyme EI546_14220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EI546_14230 PF02779 Transketolase, pyrimidine binding domain EI546_14230 PF02780 Transketolase, C-terminal domain EI546_14250 PF17392 Urocanase C-terminal domain EI546_14250 PF01175 Urocanase Rossmann-like domain EI546_14250 PF17391 Urocanase N-terminal domain EI546_14260 PF01926 50S ribosome-binding GTPase EI546_14260 PF07650 KH domain EI546_14275 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EI546_14275 PF01926 50S ribosome-binding GTPase EI546_14340 PF04011 LemA family EI546_14350 PF08525 Opacity-associated protein A N-terminal motif EI546_14350 PF01476 LysM domain EI546_14350 PF01551 Peptidase family M23 EI546_14355 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EI546_14355 PF01411 tRNA synthetases class II (A) EI546_14355 PF02272 DHHA1 domain EI546_14380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_14380 PF07730 Histidine kinase EI546_14385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_14385 PF07730 Histidine kinase EI546_14390 PF00072 Response regulator receiver domain EI546_14390 PF00196 Bacterial regulatory proteins, luxR family EI546_14410 PF00438 S-adenosylmethionine synthetase, N-terminal domain EI546_14410 PF02772 S-adenosylmethionine synthetase, central domain EI546_14410 PF02773 S-adenosylmethionine synthetase, C-terminal domain EI546_14415 PF02566 OsmC-like protein EI546_14430 PF00005 ABC transporter EI546_14435 PF00793 DAHP synthetase I family EI546_14435 PF18152 DAHP synthase ferredoxin-like domain EI546_14450 PF03979 Sigma-70 factor, region 1.1 EI546_14450 PF00140 Sigma-70 factor, region 1.2 EI546_14450 PF04545 Sigma-70, region 4 EI546_14450 PF04542 Sigma-70 region 2 EI546_14450 PF04539 Sigma-70 region 3 EI546_14475 PF00013 KH domain EI546_14475 PF01138 3' exoribonuclease family, domain 1 EI546_14475 PF03725 3' exoribonuclease family, domain 2 EI546_14475 PF00575 S1 RNA binding domain EI546_14475 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EI546_14480 PF00312 Ribosomal protein S15 EI546_14485 PF01039 Carboxyl transferase domain EI546_14490 PF01116 Fructose-bisphosphate aldolase class-II EI546_14500 PF00588 SpoU rRNA Methylase family EI546_14500 PF08032 RNA 2'-O ribose methyltransferase substrate binding EI546_14510 PF01209 ubiE/COQ5 methyltransferase family EI546_14515 PF02254 TrkA-N domain EI546_14515 PF02080 TrkA-C domain EI546_14520 PF02386 Cation transport protein EI546_14540 PF00487 Fatty acid desaturase EI546_14545 PF02527 rRNA small subunit methyltransferase G EI546_14550 PF00293 NUDIX domain EI546_14570 PF08534 Redoxin EI546_14580 PF00171 Aldehyde dehydrogenase family EI546_14590 PF04379 ApaG domain EI546_14605 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) EI546_14605 PF11973 NQRA C-terminal domain EI546_14610 PF03116 NQR2, RnfD, RnfE family EI546_14615 PF04205 FMN-binding domain EI546_14620 PF02508 Rnf-Nqr subunit, membrane protein EI546_14630 PF02508 Rnf-Nqr subunit, membrane protein EI546_14635 PF00111 2Fe-2S iron-sulfur cluster binding domain EI546_14635 PF00175 Oxidoreductase NAD-binding domain EI546_14635 PF00970 Oxidoreductase FAD-binding domain EI546_14645 PF02424 ApbE family EI546_14655 PF01209 ubiE/COQ5 methyltransferase family EI546_14665 PF00557 Metallopeptidase family M24 EI546_14680 PF00326 Prolyl oligopeptidase family EI546_14680 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EI546_14680 PF07676 WD40-like Beta Propeller Repeat EI546_14690 PF04055 Radical SAM superfamily EI546_14690 PF18693 TRAM domain EI546_14690 PF00919 Uncharacterized protein family UPF0004 EI546_14705 PF00072 Response regulator receiver domain EI546_14705 PF04397 LytTr DNA-binding domain EI546_14710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_14710 PF02743 Cache domain EI546_14710 PF00672 HAMP domain EI546_14710 PF06580 Histidine kinase EI546_14755 PF12843 Putative quorum-sensing-regulated virulence factor EI546_14770 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EI546_14770 PF01476 LysM domain EI546_14775 PF00958 GMP synthase C terminal domain EI546_14775 PF02540 NAD synthase EI546_14775 PF00117 Glutamine amidotransferase class-I EI546_14780 PF10079 Bacillithiol biosynthesis BshC EI546_14795 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EI546_14835 PF00535 Glycosyl transferase family 2 EI546_14845 PF00082 Subtilase family EI546_14850 PF00005 ABC transporter EI546_14885 PF13426 PAS domain EI546_14885 PF07568 Histidine kinase EI546_14885 PF13581 Histidine kinase-like ATPase domain EI546_14905 PF00884 Sulfatase EI546_14910 PF14863 Alkyl sulfatase dimerisation EI546_14910 PF14864 Alkyl sulfatase C-terminal EI546_14910 PF00753 Metallo-beta-lactamase superfamily EI546_14920 PF03781 Sulfatase-modifying factor enzyme 1 EI546_14925 PF07969 Amidohydrolase family EI546_14960 PF07075 Protein of unknown function (DUF1343) EI546_14965 PF02687 FtsX-like permease family EI546_14965 PF12704 MacB-like periplasmic core domain EI546_14975 PF00291 Pyridoxal-phosphate dependent enzyme EI546_14975 PF00571 CBS domain EI546_15005 PF01235 Sodium:alanine symporter family EI546_15015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EI546_15015 PF02770 Acyl-CoA dehydrogenase, middle domain EI546_15015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EI546_15035 PF07992 Pyridine nucleotide-disulphide oxidoreductase EI546_15050 PF06580 Histidine kinase EI546_15050 PF07694 5TMR of 5TMR-LYT EI546_15050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_15065 PF00072 Response regulator receiver domain EI546_15065 PF04397 LytTr DNA-binding domain EI546_15095 PF00425 chorismate binding enzyme EI546_15095 PF04715 Anthranilate synthase component I, N terminal region EI546_15110 PF11734 TilS substrate C-terminal domain EI546_15110 PF01171 PP-loop family EI546_15115 PF00365 Phosphofructokinase EI546_15120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EI546_15120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EI546_15130 PF01078 Magnesium chelatase, subunit ChlI EI546_15130 PF13335 Magnesium chelatase, subunit ChlI C-terminal EI546_15135 PF00675 Insulinase (Peptidase family M16) EI546_15135 PF05193 Peptidase M16 inactive domain EI546_15140 PF00072 Response regulator receiver domain EI546_15140 PF00486 Transcriptional regulatory protein, C terminal EI546_15145 PF00672 HAMP domain EI546_15145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EI546_15145 PF00512 His Kinase A (phospho-acceptor) domain EI546_15150 PF10518 TAT (twin-arginine translocation) pathway signal sequence EI546_15150 PF00149 Calcineurin-like phosphoesterase EI546_15175 PF00873 AcrB/AcrD/AcrF family EI546_15215 PF02390 Putative methyltransferase EI546_15215 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EI546_15220 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EI546_15225 PF16363 GDP-mannose 4,6 dehydratase EI546_15250 PF02566 OsmC-like protein EI546_15255 PF00291 Pyridoxal-phosphate dependent enzyme EI546_15280 PF00186 Dihydrofolate reductase EI546_15290 PF01609 Transposase DDE domain EI546_15300 PF10017 Histidine-specific methyltransferase, SAM-dependent EI546_15305 PF12867 DinB superfamily EI546_15305 PF03781 Sulfatase-modifying factor enzyme 1 EI546_15315 PF00303 Thymidylate synthase EI546_15320 PF01773 Na+ dependent nucleoside transporter N-terminus EI546_15320 PF07662 Na+ dependent nucleoside transporter C-terminus EI546_15320 PF07670 Nucleoside recognition EI546_15330 PF00766 Electron transfer flavoprotein FAD-binding domain EI546_15330 PF01012 Electron transfer flavoprotein domain EI546_15335 PF01012 Electron transfer flavoprotein domain EI546_15360 PF00793 DAHP synthetase I family EI546_15365 PF10531 SLBB domain EI546_15365 PF02563 Polysaccharide biosynthesis/export protein EI546_15370 PF13807 G-rich domain on putative tyrosine kinase EI546_15370 PF13614 AAA domain EI546_15370 PF02706 Chain length determinant protein EI546_15375 PF00127 Copper binding proteins, plastocyanin/azurin family EI546_15380 PF10437 Bacterial lipoate protein ligase C-terminus EI546_15380 PF03099 Biotin/lipoate A/B protein ligase family EI546_15390 PF04452 RNA methyltransferase EI546_15395 PF00814 Glycoprotease family EI546_15405 PF00691 OmpA family EI546_15405 PF05736 OprF membrane domain EI546_15420 PF05971 RNA methyltransferase EI546_15425 PF01434 Peptidase family M41 EI546_15425 PF06480 FtsH Extracellular EI546_15425 PF17862 AAA+ lid domain EI546_15425 PF00004 ATPase family associated with various cellular activities (AAA) EI546_15430 PF00005 ABC transporter EI546_15435 PF01554 MatE EI546_15445 PF01569 PAP2 superfamily EI546_15450 PF00535 Glycosyl transferase family 2 EI546_15465 PF00781 Diacylglycerol kinase catalytic domain EI546_15475 PF02566 OsmC-like protein EI546_15550 PF04542 Sigma-70 region 2 EI546_15550 PF08281 Sigma-70, region 4 EI546_15555 PF00664 ABC transporter transmembrane region EI546_15555 PF00005 ABC transporter EI546_15560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EI546_15560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EI546_15560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EI546_15560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EI546_15565 PF00535 Glycosyl transferase family 2 EI546_15575 PF01197 Ribosomal protein L31 EI546_15600 PF00919 Uncharacterized protein family UPF0004 EI546_15600 PF01938 TRAM domain EI546_15600 PF04055 Radical SAM superfamily EI546_15630 PF00468 Ribosomal protein L34 EI546_15635 PF02142 MGS-like domain EI546_15635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EI546_15635 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EI546_15655 PF02646 RmuC family EI546_15660 PF00005 ABC transporter EI546_15665 PF01032 FecCD transport family EI546_15690 PF04542 Sigma-70 region 2 EI546_15690 PF08281 Sigma-70, region 4 EI546_15710 PF08328 Adenylosuccinate lyase C-terminal EI546_15710 PF00206 Lyase EI546_15715 PF00501 AMP-binding enzyme EI546_15715 PF16177 Acetyl-coenzyme A synthetase N-terminus EI546_15715 PF13193 AMP-binding enzyme C-terminal domain EI546_15725 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) EI546_15735 PF00534 Glycosyl transferases group 1 EI546_15735 PF13439 Glycosyltransferase Family 4 EI546_15745 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EI546_15760 PF00834 Ribulose-phosphate 3 epimerase family EI546_15765 PF00274 Fructose-bisphosphate aldolase class-I EI546_15785 PF02779 Transketolase, pyrimidine binding domain EI546_15785 PF02780 Transketolase, C-terminal domain EI546_15785 PF00456 Transketolase, thiamine diphosphate binding domain EI546_15790 PF02502 Ribose/Galactose Isomerase EI546_15795 PF00923 Transaldolase/Fructose-6-phosphate aldolase EI546_15800 PF13419 Haloacid dehalogenase-like hydrolase EI546_15805 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EI546_15805 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EI546_15810 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EI546_15810 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EI546_15815 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EI546_15820 PF00342 Phosphoglucose isomerase EI546_15835 PF01238 Phosphomannose isomerase type I EI546_15845 PF08459 UvrC Helix-hairpin-helix N-terminal EI546_15845 PF02151 UvrB/uvrC motif EI546_15845 PF01541 GIY-YIG catalytic domain EI546_15850 PF13361 UvrD-like helicase C-terminal domain EI546_15850 PF00580 UvrD/REP helicase N-terminal domain EI546_15855 PF05532 CsbD-like EI546_15860 PF02861 Clp amino terminal domain, pathogenicity island component EI546_15860 PF10431 C-terminal, D2-small domain, of ClpB protein EI546_15860 PF07724 AAA domain (Cdc48 subfamily) EI546_15860 PF17871 AAA lid domain EI546_15860 PF00004 ATPase family associated with various cellular activities (AAA) EI546_15865 PF11009 Protein of unknown function (DUF2847) EI546_15875 PF13677 Membrane MotB of proton-channel complex MotA/MotB EI546_15875 PF00691 OmpA family EI546_15880 PF00453 Ribosomal protein L20 EI546_15885 PF01632 Ribosomal protein L35 EI546_15890 PF05198 Translation initiation factor IF-3, N-terminal domain EI546_15890 PF00707 Translation initiation factor IF-3, C-terminal domain EI546_15895 PF03129 Anticodon binding domain EI546_15895 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EI546_15895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EI546_15895 PF02824 TGS domain EI546_15955 PF00485 Phosphoribulokinase / Uridine kinase family EI546_15965 PF01642 Methylmalonyl-CoA mutase EI546_15975 PF02310 B12 binding domain EI546_15975 PF01642 Methylmalonyl-CoA mutase EI546_15990 PF16491 CAAX prenyl protease N-terminal, five membrane helices EI546_15990 PF01435 Peptidase family M48 EI546_15995 PF08032 RNA 2'-O ribose methyltransferase substrate binding EI546_15995 PF00588 SpoU rRNA Methylase family EI546_16010 PF01546 Peptidase family M20/M25/M40 EI546_16010 PF07687 Peptidase dimerisation domain EI546_16015 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EI546_16025 PF02272 DHHA1 domain EI546_16025 PF01368 DHH family EI546_16030 PF00334 Nucleoside diphosphate kinase EI546_16050 PF12848 ABC transporter EI546_16050 PF16326 ABC transporter C-terminal domain EI546_16050 PF00005 ABC transporter