locus-tag	class	description
Aeqsu_0001	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
Aeqsu_0015	COG2217	Heavy metal translocating P-type atpase
Aeqsu_0022	COG0069	glutamate synthase activity
Aeqsu_0023	COG0028	Belongs to the TPP enzyme family
Aeqsu_0028	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Aeqsu_0029	COG3273	potassium ion transport
Aeqsu_0029	COG0471	metal ion transport
Aeqsu_0030	COG0668	transmembrane transport
Aeqsu_0033	COG0300	oxidoreductase activity
Aeqsu_0035	COG3264	Mechanosensitive ion channel
Aeqsu_0035	COG1196	nuclear chromosome segregation
Aeqsu_0036	COG2814	Major facilitator Superfamily
Aeqsu_0037	COG0668	transmembrane transport
Aeqsu_0038	COG1607	acyl-coa hydrolase
Aeqsu_0039	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
Aeqsu_0040	COG0519	Catalyzes the synthesis of GMP from XMP
Aeqsu_0040	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Aeqsu_0041	COG1388	LysM domain
Aeqsu_0041	COG3942	CHAP domain
Aeqsu_0044	COG3530	Putative quorum-sensing-regulated virulence factor
Aeqsu_0046	COG0504	CTP synthase activity
Aeqsu_0047	COG0706	membrane insertase activity
Aeqsu_0049	COG0482	sulfurtransferase activity
Aeqsu_0052	COG2342	PFAM TM1410 hypothetical-related protein
Aeqsu_0054	COG1278	Cold shock
Aeqsu_0056	COG0019	diaminopimelate decarboxylase activity
Aeqsu_0057	COG0045	succinate-CoA ligase (ADP-forming) activity
Aeqsu_0058	COG4325	translation initiation factor activity
Aeqsu_0060	COG1187	pseudouridine synthase activity
Aeqsu_0067	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Aeqsu_0068	COG0631	protein serine/threonine phosphatase activity
Aeqsu_0069	COG2815	serine threonine protein kinase
Aeqsu_0069	COG0515	serine threonine protein kinase
Aeqsu_0077	COG3609	addiction module antidote protein, CC2985 family
Aeqsu_0081	COG4680	protein conserved in bacteria
Aeqsu_0088	COG2855	membrane
Aeqsu_0089	COG0668	transmembrane transport
Aeqsu_0094	COG2814	Major facilitator Superfamily
Aeqsu_0095	COG2351	hydroxyisourate hydrolase activity
Aeqsu_0107	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Aeqsu_0115	COG0348	domain, Protein
Aeqsu_0120	COG2217	Heavy metal translocating P-type atpase
Aeqsu_0125	COG4221	oxidoreductase activity
Aeqsu_0131	COG2010	Cytochrome c
Aeqsu_0135	COG0427	acetyl-CoA hydrolase
Aeqsu_0138	COG1131	(ABC) transporter
Aeqsu_0143	COG4263	nitrous-oxide reductase activity
Aeqsu_0144	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
Aeqsu_0150	COG0745	RESPONSE REGULATOR receiver
Aeqsu_0151	COG2205	protein histidine kinase activity
Aeqsu_0155	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
Aeqsu_0156	COG0813	purine-nucleoside phosphorylase activity
Aeqsu_0157	COG0589	response to stress
Aeqsu_0161	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aeqsu_0167	COG2827	Endonuclease containing a URI domain
Aeqsu_0193	COG1525	nuclease
Aeqsu_0209	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
Aeqsu_0210	COG0500	methyltransferase
Aeqsu_0213	COG0708	Exodeoxyribonuclease III
Aeqsu_0215	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Aeqsu_0216	COG0439	Biotin carboxylase
Aeqsu_0219	COG2133	pyrroloquinoline quinone binding
Aeqsu_0221	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
Aeqsu_0223	COG1475	DNA binding
Aeqsu_0224	COG1192	Involved in chromosome partitioning
Aeqsu_0225	COG1028	Short-chain dehydrogenase reductase Sdr
Aeqsu_0230	COG1012	belongs to the aldehyde dehydrogenase family
Aeqsu_0235	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
Aeqsu_0237	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
Aeqsu_0243	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
Aeqsu_0248	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
Aeqsu_0248	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Aeqsu_0250	COG2234	aminopeptidase activity
Aeqsu_0252	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
Aeqsu_0253	COG0626	cystathionine gamma-synthase activity
Aeqsu_0255	COG0456	acetyltransferase
Aeqsu_0257	COG0336	Belongs to the RNA methyltransferase TrmD family
Aeqsu_0261	COG0640	Transcriptional regulator
Aeqsu_0262	COG5658	integral membrane protein
Aeqsu_0263	COG0335	large ribosomal subunit rRNA binding
Aeqsu_0267	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
Aeqsu_0275	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
Aeqsu_0276	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
Aeqsu_0277	COG0291	Belongs to the bacterial ribosomal protein bL35 family
Aeqsu_0278	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
Aeqsu_0281	COG0305	Participates in initiation and elongation during chromosome replication
Aeqsu_0282	COG0825	malonyl-CoA metabolic process
Aeqsu_0285	COG0343	queuine tRNA-ribosyltransferase activity
Aeqsu_0286	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
Aeqsu_0287	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
Aeqsu_0290	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
Aeqsu_0291	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
Aeqsu_0295	COG1233	COG1233 Phytoene dehydrogenase and related
Aeqsu_0300	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Aeqsu_0302	COG0714	Associated with various cellular activities
Aeqsu_0303	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Aeqsu_0305	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Aeqsu_0309	COG0517	IMP dehydrogenase activity
Aeqsu_0309	COG0516	GMP reductase activity
Aeqsu_0311	COG0737	Belongs to the 5'-nucleotidase family
Aeqsu_0313	COG1280	lysine exporter protein (LysE YggA)
Aeqsu_0314	COG0167	dihydroorotate dehydrogenase activity
Aeqsu_0317	COG2195	Cleaves the N-terminal amino acid of tripeptides
Aeqsu_0318	COG1862	Preprotein translocase
Aeqsu_0320	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Aeqsu_0323	COG1132	(ABC) transporter
Aeqsu_0325	COG1635	Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur
Aeqsu_0328	COG0659	secondary active sulfate transmembrane transporter activity
Aeqsu_0330	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Aeqsu_0333	COG2318	DinB family
Aeqsu_0334	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Aeqsu_0339	COG1131	(ABC) transporter
Aeqsu_0350	COG2264	protein methyltransferase activity
Aeqsu_0353	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Aeqsu_0354	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
Aeqsu_0358	COG2326	polyphosphate kinase activity
Aeqsu_0359	COG2204	response regulator
Aeqsu_0361	COG1668	transmembrane transport
Aeqsu_0362	COG4152	abc transporter atp-binding protein
Aeqsu_0363	COG0484	heat shock protein binding
Aeqsu_0364	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
Aeqsu_0367	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Aeqsu_0367	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
Aeqsu_0369	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Aeqsu_0379	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Aeqsu_0384	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
Aeqsu_0389	COG1522	sequence-specific DNA binding
Aeqsu_0394	COG1703	isobutyryl-CoA mutase activity
Aeqsu_0394	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
Aeqsu_0394	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
Aeqsu_0400	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
Aeqsu_0401	COG0284	orotidine-5'-phosphate decarboxylase activity
Aeqsu_0402	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
Aeqsu_0403	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
Aeqsu_0405	COG1462	curli production assembly transport component CsgG
Aeqsu_0415	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
Aeqsu_0419	COG2264	protein methyltransferase activity
Aeqsu_0420	COG0149	triose-phosphate isomerase activity
Aeqsu_0421	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Aeqsu_0425	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
Aeqsu_0426	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
Aeqsu_0427	COG1132	(ABC) transporter
Aeqsu_0428	COG0101	tRNA pseudouridine synthase activity
Aeqsu_0432	COG3279	Response regulator of the LytR AlgR family
Aeqsu_0433	COG2972	Histidine kinase
Aeqsu_0437	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
Aeqsu_0439	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
Aeqsu_0439	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
Aeqsu_0440	COG0799	negative regulation of ribosome biogenesis
Aeqsu_0441	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Aeqsu_0443	COG4589	Belongs to the CDS family
Aeqsu_0444	COG0688	phosphatidylethanolamine metabolic process
Aeqsu_0448	COG0525	valine-tRNA ligase activity
Aeqsu_0451	COG0436	Aminotransferase
Aeqsu_0452	COG0812	UDP-N-acetylmuramate dehydrogenase activity
Aeqsu_0457	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Aeqsu_0458	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Aeqsu_0460	COG1663	tetraacyldisaccharide 4'-kinase activity
Aeqsu_0461	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
Aeqsu_0463	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Aeqsu_0470	COG3844	kynureninase activity
Aeqsu_0471	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aeqsu_0474	COG1028	Short-chain dehydrogenase reductase Sdr
Aeqsu_0477	COG3104	oligopeptide transport
Aeqsu_0479	COG0671	phosphoesterase, PA-phosphatase related
Aeqsu_0480	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
Aeqsu_0486	COG3340	Belongs to the peptidase S51 family
Aeqsu_0489	COG1876	peptidase activity
Aeqsu_0490	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
Aeqsu_0495	COG1477	protein flavinylation
Aeqsu_0498	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
Aeqsu_0499	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
Aeqsu_0500	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
Aeqsu_0501	COG1805	sodium ion transport
Aeqsu_0507	COG2967	ApaG domain
Aeqsu_0509	COG1012	belongs to the aldehyde dehydrogenase family
Aeqsu_0511	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Aeqsu_0517	COG0357	Ribosomal RNA small subunit methyltransferase G
Aeqsu_0518	COG3239	Fatty acid desaturase
Aeqsu_0521	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
Aeqsu_0523	COG0569	domain protein
Aeqsu_0524	COG2226	methyltransferase
Aeqsu_0526	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Aeqsu_0528	COG0191	fructose-bisphosphate aldolase activity
Aeqsu_0529	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
Aeqsu_0530	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
Aeqsu_0531	COG1185	polyribonucleotide nucleotidyltransferase activity
Aeqsu_0540	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Aeqsu_0541	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
Aeqsu_0542	COG0492	ferredoxin-NADP+ reductase activity
Aeqsu_0545	COG4206	TonB-dependent receptor
Aeqsu_0545	COG1629	transport
Aeqsu_0550	COG4206	TonB-dependent receptor
Aeqsu_0550	COG1629	transport
Aeqsu_0551	COG2217	Heavy metal translocating P-type atpase
Aeqsu_0558	COG0138	bifunctional purine biosynthesis protein purh
Aeqsu_0559	COG1077	Cell shape determining protein MreB Mrl
Aeqsu_0562	COG0768	penicillin binding
Aeqsu_0563	COG0772	Belongs to the SEDS family
Aeqsu_0565	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Aeqsu_0567	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
Aeqsu_0569	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
Aeqsu_0570	COG0268	Binds directly to 16S ribosomal RNA
Aeqsu_0572	COG0442	prolyl-tRNA aminoacylation
Aeqsu_0575	COG0302	gtp cyclohydrolase
Aeqsu_0576	COG0215	cysteine-tRNA ligase activity
Aeqsu_0577	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
Aeqsu_0578	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
Aeqsu_0580	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Aeqsu_0585	COG0187	DNA topoisomerase II activity
Aeqsu_0587	COG0602	queuosine metabolic process
Aeqsu_0588	COG0433	COG0433 Predicted ATPase
Aeqsu_0595	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
Aeqsu_0597	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Aeqsu_0598	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Aeqsu_0599	COG0823	Involved in the tonB-independent uptake of proteins
Aeqsu_0599	COG1506	peptidase
Aeqsu_0602	COG0531	amino acid
Aeqsu_0603	COG0640	Transcriptional regulator
Aeqsu_0604	COG2226	methyltransferase
Aeqsu_0606	COG0513	Belongs to the DEAD box helicase family
Aeqsu_0611	COG3279	Response regulator of the LytR AlgR family
Aeqsu_0623	COG2267	carboxylic ester hydrolase activity
Aeqsu_0625	COG0288	reversible hydration of carbon dioxide
Aeqsu_0626	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
Aeqsu_0628	COG0018	arginyl-trna synthetase
Aeqsu_0630	COG2095	MarC family integral membrane protein
Aeqsu_0635	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Aeqsu_0636	COG1477	protein flavinylation
Aeqsu_0643	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
Aeqsu_0644	COG0512	Glutamine amidotransferase of anthranilate synthase
Aeqsu_0645	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Aeqsu_0646	COG0134	indole-3-glycerol-phosphate synthase activity
Aeqsu_0647	COG0135	phosphoribosylanthranilate isomerase activity
Aeqsu_0648	COG0133	tryptophan synthase activity
Aeqsu_0649	COG0159	tryptophan synthase activity
Aeqsu_0656	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
Aeqsu_0662	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Aeqsu_0663	COG3483	tryptophan 2,3-dioxygenase activity
Aeqsu_0664	COG3189	MarR family transcriptional regulator
Aeqsu_0676	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
Aeqsu_0681	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Aeqsu_0683	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
Aeqsu_0687	COG1215	transferase activity, transferring glycosyl groups
Aeqsu_0690	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Aeqsu_0692	COG0321	lipoyl(octanoyl) transferase activity
Aeqsu_0697	COG0401	homolog of Blt101
Aeqsu_0698	COG2197	response regulator
Aeqsu_0699	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
Aeqsu_0701	COG0563	adenylate kinase activity
Aeqsu_0702	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
Aeqsu_0706	COG0508	dehydrogenase complex catalyzes the overall conversion of
Aeqsu_0706	COG0022	dehydrogenase e1 component
Aeqsu_0708	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
Aeqsu_0710	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
Aeqsu_0711	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
Aeqsu_0714	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Aeqsu_0715	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
Aeqsu_0718	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
Aeqsu_0720	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
Aeqsu_0723	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Aeqsu_0727	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Aeqsu_0730	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Aeqsu_0730	COG1519	Transferase
Aeqsu_0733	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
Aeqsu_0735	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
Aeqsu_0736	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
Aeqsu_0748	COG2885	chlorophyll binding
Aeqsu_0748	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Aeqsu_0752	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Aeqsu_0754	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Aeqsu_0755	COG1902	pentaerythritol trinitrate reductase activity
Aeqsu_0757	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
Aeqsu_0760	COG4558	Periplasmic binding protein
Aeqsu_0761	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Aeqsu_0762	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
Aeqsu_0770	COG2081	HI0933 family
Aeqsu_0771	COG0076	glutamate decarboxylase activity
Aeqsu_0778	COG1028	Short-chain dehydrogenase reductase Sdr
Aeqsu_0779	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Aeqsu_0790	COG2824	Alkylphosphonate utilization operon protein PhnA
Aeqsu_0798	COG0488	(ABC) transporter
Aeqsu_0800	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
Aeqsu_0800	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Aeqsu_0804	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Aeqsu_0807	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Aeqsu_0812	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
Aeqsu_0813	COG0459	protein refolding
Aeqsu_0817	COG3153	acetyltransferase
Aeqsu_0817	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Aeqsu_0820	COG1899	peptidyl-lysine modification to peptidyl-hypusine
Aeqsu_0821	COG0010	Belongs to the arginase family
Aeqsu_0823	COG1187	pseudouridine synthase activity
Aeqsu_0824	COG1428	Deoxynucleoside kinase
Aeqsu_0829	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
Aeqsu_0831	COG0544	peptidyl-prolyl cis-trans isomerase activity
Aeqsu_0832	COG1950	PFAM Membrane protein of
Aeqsu_0835	COG0596	Alpha beta hydrolase
Aeqsu_0837	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
Aeqsu_0839	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Aeqsu_0841	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Aeqsu_0845	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
Aeqsu_0846	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
Aeqsu_0848	COG3279	Response regulator of the LytR AlgR family
Aeqsu_0849	COG3275	phosphorelay sensor kinase activity
Aeqsu_0855	COG1331	Highly conserved protein containing a thioredoxin domain
Aeqsu_0856	COG0668	transmembrane transport
Aeqsu_0859	COG1214	PFAM Peptidase M22, glycoprotease
Aeqsu_0860	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aeqsu_0862	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aeqsu_0864	COG0577	efflux transmembrane transporter activity
Aeqsu_0864	COG1136	(ABC) transporter
Aeqsu_0865	COG1136	(ABC) transporter
Aeqsu_0865	COG0577	efflux transmembrane transporter activity
Aeqsu_0866	COG1136	(ABC) transporter
Aeqsu_0868	COG2322	membrane
Aeqsu_0869	COG1999	signal sequence binding
Aeqsu_0877	COG1845	cytochrome c oxidase, subunit III
Aeqsu_0878	COG1845	cytochrome c oxidase, subunit III
Aeqsu_0879	COG0109	protoheme IX farnesyltransferase activity
Aeqsu_0885	COG0509	glycine decarboxylation via glycine cleavage system
Aeqsu_0887	COG0632	four-way junction helicase activity
Aeqsu_0890	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
Aeqsu_0892	COG2255	four-way junction helicase activity
Aeqsu_0893	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
Aeqsu_0898	COG0052	Belongs to the universal ribosomal protein uS2 family
Aeqsu_0899	COG0437	4 iron, 4 sulfur cluster binding
Aeqsu_0903	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
Aeqsu_0904	COG0195	Participates in both transcription termination and antitermination
Aeqsu_0905	COG0779	Required for maturation of 30S ribosomal subunits
Aeqsu_0906	COG0589	response to stress
Aeqsu_0908	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
Aeqsu_0911	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Aeqsu_0913	COG0463	Glycosyl transferase, family 2
Aeqsu_0915	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
Aeqsu_0918	COG0726	polysaccharide deacetylase
Aeqsu_0920	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Aeqsu_0921	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Aeqsu_0927	COG1131	(ABC) transporter
Aeqsu_0931	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
Aeqsu_0932	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
Aeqsu_0935	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Aeqsu_0936	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Aeqsu_0937	COG1028	Short-chain dehydrogenase reductase Sdr
Aeqsu_0939	COG2986	histidine ammonia-lyase
Aeqsu_0947	COG0726	polysaccharide deacetylase
Aeqsu_0949	COG3118	belongs to the thioredoxin family
Aeqsu_0950	COG1408	metallophosphoesterase
Aeqsu_0953	COG3537	Alpha-1,2-mannosidase
Aeqsu_0955	COG1446	asparaginase
Aeqsu_0960	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Aeqsu_0960	COG0189	ligase activity
Aeqsu_0965	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Aeqsu_0965	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Aeqsu_0969	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
Aeqsu_0970	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
Aeqsu_0971	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Aeqsu_0972	COG0052	Belongs to the universal ribosomal protein uS2 family
Aeqsu_0973	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
Aeqsu_0980	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Aeqsu_0981	COG0756	dUTP diphosphatase activity
Aeqsu_0984	COG0824	Thioesterase
Aeqsu_0985	COG2239	Acts as a magnesium transporter
Aeqsu_0986	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Aeqsu_0992	COG2095	MarC family integral membrane protein
Aeqsu_0994	COG0793	Belongs to the peptidase S41A family
Aeqsu_1018	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
Aeqsu_1019	COG1061	Type III restriction enzyme res subunit
Aeqsu_1020	COG1002	Type II restriction enzyme, methylase subunits
Aeqsu_1024	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Aeqsu_1025	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
Aeqsu_1026	COG0193	aminoacyl-tRNA hydrolase activity
Aeqsu_1027	COG0196	riboflavin kinase activity
Aeqsu_1029	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
Aeqsu_1033	COG0539	negative regulation of cytoplasmic translation
Aeqsu_1034	COG0232	Belongs to the dGTPase family. Type 2 subfamily
Aeqsu_1038	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
Aeqsu_1039	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
Aeqsu_1040	COG1505	serine-type exopeptidase activity
Aeqsu_1048	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
Aeqsu_1049	COG0860	N-Acetylmuramoyl-L-alanine amidase
Aeqsu_1050	COG1970	mechanosensitive ion channel activity
Aeqsu_1051	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Aeqsu_1052	COG1435	thymidine kinase activity
Aeqsu_1055	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
Aeqsu_1059	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Aeqsu_1059	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
Aeqsu_1061	COG0720	synthase
Aeqsu_1071	COG1074	ATP-dependent DNA helicase activity
Aeqsu_1072	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
Aeqsu_1074	COG1105	Belongs to the carbohydrate kinase PfkB family
Aeqsu_1075	COG3341	Caulimovirus viroplasmin
Aeqsu_1075	COG0328	RNA-DNA hybrid ribonuclease activity
Aeqsu_1077	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Aeqsu_1078	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Aeqsu_1079	COG0571	ribonuclease III activity
Aeqsu_1081	COG0469	pyruvate kinase activity
Aeqsu_1083	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Aeqsu_1085	COG3647	Membrane
Aeqsu_1088	COG3525	Glycosyl hydrolase, family 20, catalytic domain
Aeqsu_1089	COG3250	beta-galactosidase activity
Aeqsu_1090	COG1538	Outer membrane efflux protein
Aeqsu_1092	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aeqsu_1095	COG4953	penicillin-binding protein 1C
Aeqsu_1097	COG1446	asparaginase
Aeqsu_1100	COG1012	belongs to the aldehyde dehydrogenase family
Aeqsu_1104	COG4260	virion core protein, lumpy skin disease virus
Aeqsu_1106	COG4221	oxidoreductase activity
Aeqsu_1107	COG0714	Associated with various cellular activities
Aeqsu_1110	COG2304	oxidoreductase activity
Aeqsu_1112	COG2304	oxidoreductase activity
Aeqsu_1118	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
Aeqsu_1121	COG3842	ATPase activity
Aeqsu_1122	COG2130	NADP-dependent
Aeqsu_1123	COG1289	transmembrane transporter activity
Aeqsu_1125	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Aeqsu_1127	COG0439	Biotin carboxylase
Aeqsu_1128	COG0511	ligase activity, forming carbon-carbon bonds
Aeqsu_1129	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
Aeqsu_1130	COG0333	Belongs to the bacterial ribosomal protein bL32 family
Aeqsu_1132	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
Aeqsu_1133	COG0307	riboflavin synthase, alpha
Aeqsu_1136	COG0346	lactoylglutathione lyase activity
Aeqsu_1144	COG0123	including yeast histone deacetylase and acetoin utilization protein
Aeqsu_1147	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Aeqsu_1147	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Aeqsu_1148	COG1619	proteins homologs of microcin C7 resistance protein MccF
Aeqsu_1149	COG0792	nuclease activity
Aeqsu_1151	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
Aeqsu_1155	COG1201	RNA secondary structure unwinding
Aeqsu_1156	COG1793	dna ligase
Aeqsu_1159	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
Aeqsu_1161	COG0527	aspartate kinase activity
Aeqsu_1161	COG0460	homoserine dehydrogenase
Aeqsu_1167	COG0346	lactoylglutathione lyase activity
Aeqsu_1168	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Aeqsu_1172	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
Aeqsu_1173	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
Aeqsu_1174	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Aeqsu_1175	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
Aeqsu_1176	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Aeqsu_1177	COG0356	it plays a direct role in the translocation of protons across the membrane
Aeqsu_1182	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aeqsu_1190	COG0151	Belongs to the GarS family
Aeqsu_1197	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
Aeqsu_1199	COG0673	inositol 2-dehydrogenase activity
Aeqsu_1202	COG2226	methyltransferase
Aeqsu_1203	COG0367	asparagine synthase
Aeqsu_1208	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
Aeqsu_1209	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
Aeqsu_1214	COG4942	peptidase
Aeqsu_1215	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
Aeqsu_1218	COG1705	Flagellar rod assembly protein muramidase FlgJ
Aeqsu_1218	COG1388	LysM domain
Aeqsu_1219	COG0126	phosphoglycerate kinase activity
Aeqsu_1222	COG0445	tRNA wobble uridine modification
Aeqsu_1223	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
Aeqsu_1225	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Aeqsu_1230	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Aeqsu_1233	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
Aeqsu_1238	COG0557	exoribonuclease II activity
Aeqsu_1240	COG0698	ribose 5-phosphate isomerase
Aeqsu_1242	COG2153	protein acetylation
Aeqsu_1245	COG0793	Belongs to the peptidase S41A family
Aeqsu_1247	COG0594	ribonuclease P activity
Aeqsu_1250	COG1404	Belongs to the peptidase S8 family
Aeqsu_1251	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Aeqsu_1252	COG3263	regulation of cellular component size
Aeqsu_1255	COG0481	GTPase activity
Aeqsu_1259	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
Aeqsu_1261	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Aeqsu_1262	COG3590	peptidase
Aeqsu_1264	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Aeqsu_1268	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Aeqsu_1269	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
Aeqsu_1269	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Aeqsu_1274	COG0750	zinc metalloprotease
Aeqsu_1276	COG1999	signal sequence binding
Aeqsu_1282	COG1321	iron dependent repressor
Aeqsu_1282	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Aeqsu_1283	COG4771	TonB-dependent receptor
Aeqsu_1284	COG4232	protein-disulfide reductase activity
Aeqsu_1285	COG0484	heat shock protein binding
Aeqsu_1289	COG1418	mRNA catabolic process
Aeqsu_1296	COG3548	integral membrane protein
Aeqsu_1297	COG2936	dipeptidyl-peptidase activity
Aeqsu_1298	COG1024	Enoyl-CoA hydratase
Aeqsu_1299	COG5000	phosphorelay sensor kinase activity
Aeqsu_1302	COG0534	Mate efflux family protein
Aeqsu_1303	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
Aeqsu_1308	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
Aeqsu_1309	COG0181	hydroxymethylbilane synthase activity
Aeqsu_1310	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Aeqsu_1313	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
Aeqsu_1316	COG0408	coproporphyrinogen oxidase activity
Aeqsu_1318	COG0113	porphobilinogen synthase activity
Aeqsu_1320	COG1253	flavin adenine dinucleotide binding
Aeqsu_1321	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Aeqsu_1325	COG4172	Belongs to the ABC transporter superfamily
Aeqsu_1326	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
Aeqsu_1327	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Aeqsu_1328	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
Aeqsu_1330	COG1774	PSP1 C-terminal conserved region
Aeqsu_1334	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
Aeqsu_1338	COG0180	Tryptophanyl-tRNA synthetase
Aeqsu_1340	COG0758	DNA mediated transformation
Aeqsu_1340	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
Aeqsu_1342	COG1607	acyl-coa hydrolase
Aeqsu_1345	COG0211	Belongs to the bacterial ribosomal protein bL27 family
Aeqsu_1346	COG0261	This protein binds to 23S rRNA in the presence of protein L20
Aeqsu_1346	COG3743	rRNA binding
Aeqsu_1350	COG0629	single-stranded DNA binding
Aeqsu_1353	COG0776	regulation of translation
Aeqsu_1355	COG1530	ribonuclease E activity
Aeqsu_1360	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
Aeqsu_1364	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Aeqsu_1367	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
Aeqsu_1368	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
Aeqsu_1371	COG2197	response regulator
Aeqsu_1372	COG4585	Histidine kinase
Aeqsu_1373	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
Aeqsu_1375	COG1960	acyl-CoA dehydrogenase activity
Aeqsu_1376	COG0667	Aldo Keto reductase
Aeqsu_1378	COG0708	Exodeoxyribonuclease III
Aeqsu_1382	COG0423	glycine-tRNA ligase activity
Aeqsu_1387	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
Aeqsu_1388	COG0436	Aminotransferase
Aeqsu_1389	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
Aeqsu_1391	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
Aeqsu_1396	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
Aeqsu_1399	COG3437	response regulator, receiver
Aeqsu_1399	COG3850	Histidine kinase
Aeqsu_1399	COG2205	protein histidine kinase activity
Aeqsu_1399	COG4999	Histidine kinase
Aeqsu_1402	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Aeqsu_1405	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Aeqsu_1405	COG0784	Response regulator, receiver
Aeqsu_1405	COG2198	Histidine kinase
Aeqsu_1405	COG2205	protein histidine kinase activity
Aeqsu_1406	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aeqsu_1408	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
Aeqsu_1409	COG2957	Belongs to the agmatine deiminase family
Aeqsu_1411	COG0519	Catalyzes the synthesis of GMP from XMP
Aeqsu_1413	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
Aeqsu_1416	COG1968	undecaprenyl-diphosphatase activity
Aeqsu_1418	COG2177	Part of the ABC transporter FtsEX involved in
Aeqsu_1420	COG0495	leucyl-tRNA aminoacylation
Aeqsu_1424	COG2363	Small membrane protein
Aeqsu_1425	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
Aeqsu_1427	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
Aeqsu_1436	COG0508	dehydrogenase complex catalyzes the overall conversion of
Aeqsu_1441	COG0084	hydrolase, TatD family'
Aeqsu_1442	COG0252	asparaginase activity
Aeqsu_1444	COG0811	peptide transport
Aeqsu_1450	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
Aeqsu_1451	COG0017	Asparaginyl-tRNA synthetase
Aeqsu_1455	COG0233	cytoplasmic translational termination
Aeqsu_1456	COG0528	UMP kinase activity
Aeqsu_1459	COG1053	succinate dehydrogenase
Aeqsu_1462	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
Aeqsu_1465	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
Aeqsu_1467	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
Aeqsu_1469	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Aeqsu_1470	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Aeqsu_1471	COG2204	response regulator
Aeqsu_1472	COG4191	Histidine kinase
Aeqsu_1477	COG4232	protein-disulfide reductase activity
Aeqsu_1479	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
Aeqsu_1482	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
Aeqsu_1485	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
Aeqsu_1487	COG0189	ligase activity
Aeqsu_1488	COG0189	ligase activity
Aeqsu_1488	COG4067	protein conserved in archaea
Aeqsu_1489	COG0189	ligase activity
Aeqsu_1490	COG0322	excinuclease ABC activity
Aeqsu_1492	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
Aeqsu_1494	COG3185	4-Hydroxyphenylpyruvate dioxygenase
Aeqsu_1506	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
Aeqsu_1509	COG2151	metal-sulfur cluster biosynthetic enzyme
Aeqsu_1510	COG2166	iron-sulfur cluster assembly
Aeqsu_1512	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
Aeqsu_1513	COG0719	Fe-S assembly protein
Aeqsu_1515	COG0396	ATPase activity
Aeqsu_1517	COG0719	Fe-S assembly protein
Aeqsu_1518	COG0316	Belongs to the HesB IscA family
Aeqsu_1523	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
Aeqsu_1525	COG0006	proline dipeptidase activity
Aeqsu_1548	COG1012	belongs to the aldehyde dehydrogenase family
Aeqsu_1549	COG0456	acetyltransferase
Aeqsu_1550	COG1528	Iron-storage protein
Aeqsu_1551	COG1381	Involved in DNA repair and RecF pathway recombination
Aeqsu_1554	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Aeqsu_1556	COG0626	cystathionine gamma-synthase activity
Aeqsu_1561	COG0429	hydrolase of the alpha beta-hydrolase fold
Aeqsu_1562	COG1561	YicC-like family, N-terminal region
Aeqsu_1563	COG0194	GDP metabolic process
Aeqsu_1564	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
Aeqsu_1567	COG0463	Glycosyl transferase, family 2
Aeqsu_1570	COG0702	epimerase
Aeqsu_1571	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
Aeqsu_1574	COG0745	RESPONSE REGULATOR receiver
Aeqsu_1575	COG5002	protein histidine kinase activity
Aeqsu_1577	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Aeqsu_1581	COG0489	protein tyrosine kinase activity
Aeqsu_1583	COG0492	ferredoxin-NADP+ reductase activity
Aeqsu_1585	COG1730	sister chromatid segregation
Aeqsu_1596	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
Aeqsu_1597	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Aeqsu_1598	COG0228	four-way junction DNA binding
Aeqsu_1603	COG0740	serine-type endopeptidase activity
Aeqsu_1610	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Aeqsu_1615	COG0463	Glycosyl transferase, family 2
Aeqsu_1617	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
Aeqsu_1618	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Aeqsu_1619	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Aeqsu_1624	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
Aeqsu_1627	COG0415	Belongs to the DNA photolyase family
Aeqsu_1628	COG3046	protein related to deoxyribodipyrimidine photolyase
Aeqsu_1638	COG2272	Belongs to the type-B carboxylesterase lipase family
Aeqsu_1646	COG4585	Histidine kinase
Aeqsu_1647	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
Aeqsu_1656	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
Aeqsu_1661	COG0069	glutamate synthase activity
Aeqsu_1667	COG1404	Belongs to the peptidase S8 family
Aeqsu_1678	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
Aeqsu_1687	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
Aeqsu_1688	COG1705	Flagellar rod assembly protein muramidase FlgJ
Aeqsu_1689	COG2515	1-aminocyclopropane-1-carboxylate deaminase
Aeqsu_1698	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Aeqsu_1700	COG1960	acyl-CoA dehydrogenase activity
Aeqsu_1704	COG0811	peptide transport
Aeqsu_1705	COG0848	biopolymer transport protein
Aeqsu_1712	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
Aeqsu_1718	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
Aeqsu_1719	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Aeqsu_1723	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Aeqsu_1725	COG1028	Short-chain dehydrogenase reductase Sdr
Aeqsu_1732	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Aeqsu_1733	COG1785	Belongs to the alkaline phosphatase family
Aeqsu_1734	COG1215	transferase activity, transferring glycosyl groups
Aeqsu_1737	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
Aeqsu_1738	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Aeqsu_1738	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Aeqsu_1743	COG0339	signal peptide processing
Aeqsu_1745	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
Aeqsu_1746	COG2827	Endonuclease containing a URI domain
Aeqsu_1747	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
Aeqsu_1756	COG0596	Alpha beta hydrolase
Aeqsu_1763	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
Aeqsu_1765	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
Aeqsu_1767	COG1428	Deoxynucleoside kinase
Aeqsu_1773	COG3186	Phenylalanine-4-hydroxylase
Aeqsu_1775	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aeqsu_1776	COG3396	Phenylacetate-CoA oxygenase
Aeqsu_1777	COG3460	Phenylacetate-CoA oxygenase
Aeqsu_1779	COG3396	Phenylacetate-CoA oxygenase
Aeqsu_1780	COG2151	metal-sulfur cluster biosynthetic enzyme
Aeqsu_1781	COG1024	Enoyl-CoA hydratase
Aeqsu_1782	COG1250	3-hydroxyacyl-CoA dehydrogenase
Aeqsu_1784	COG2321	neutral zinc metallopeptidase
Aeqsu_1785	COG0183	Belongs to the thiolase family
Aeqsu_1788	COG2030	dehydratase
Aeqsu_1788	COG1012	belongs to the aldehyde dehydrogenase family
Aeqsu_1791	COG0508	dehydrogenase complex catalyzes the overall conversion of
Aeqsu_1792	COG0022	dehydrogenase e1 component
Aeqsu_1794	COG4585	Histidine kinase
Aeqsu_1803	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
Aeqsu_1804	COG0739	heme binding
Aeqsu_1806	COG1704	LemA family
Aeqsu_1812	COG2364	Membrane
Aeqsu_1813	COG1160	GTP binding
Aeqsu_1816	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
Aeqsu_1825	COG4585	Histidine kinase
Aeqsu_1828	COG2197	response regulator
Aeqsu_1830	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
Aeqsu_1831	COG0745	RESPONSE REGULATOR receiver
Aeqsu_1835	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Aeqsu_1836	COG0527	aspartate kinase activity
Aeqsu_1836	COG0460	homoserine dehydrogenase
Aeqsu_1837	COG1765	OsmC-like protein
Aeqsu_1838	COG1410	methionine synthase
Aeqsu_1838	COG0646	methionine synthase
Aeqsu_1839	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Aeqsu_1841	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
Aeqsu_1846	COG4555	ABC transporter
Aeqsu_1848	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
Aeqsu_1849	COG1162	GTPase activity
Aeqsu_1856	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
Aeqsu_1858	COG0820	rRNA (adenine-C2-)-methyltransferase activity
Aeqsu_1859	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Aeqsu_1864	COG0358	DNA primase activity
Aeqsu_1865	COG2197	response regulator
Aeqsu_1866	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Aeqsu_1869	COG0218	Necessary for normal cell division and for the maintenance of normal septation
Aeqsu_1871	COG2001	Belongs to the MraZ family
Aeqsu_1872	COG0275	rRNA processing
Aeqsu_1875	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Aeqsu_1876	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Aeqsu_1877	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
Aeqsu_1878	COG0772	Belongs to the SEDS family
Aeqsu_1879	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
Aeqsu_1880	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Aeqsu_1883	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
Aeqsu_1884	COG1610	YqeY-like protein
Aeqsu_1890	COG2003	Belongs to the UPF0758 family
Aeqsu_1896	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
Aeqsu_1898	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Aeqsu_1901	COG4206	TonB-dependent receptor
Aeqsu_1901	COG1629	transport
Aeqsu_1903	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
Aeqsu_1904	COG0049	tRNA binding
Aeqsu_1905	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
Aeqsu_1906	COG0051	transcription antitermination factor activity, RNA binding
Aeqsu_1907	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
Aeqsu_1908	COG0088	Forms part of the polypeptide exit tunnel
Aeqsu_1909	COG0089	rRNA binding
Aeqsu_1910	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
Aeqsu_1911	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
Aeqsu_1912	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
Aeqsu_1913	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
Aeqsu_1914	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
Aeqsu_1915	COG0255	Belongs to the universal ribosomal protein uL29 family
Aeqsu_1916	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
Aeqsu_1917	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
Aeqsu_1918	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
Aeqsu_1919	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
Aeqsu_1920	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
Aeqsu_1921	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
Aeqsu_1922	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
Aeqsu_1923	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
Aeqsu_1924	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
Aeqsu_1925	COG1841	ribosomal large subunit assembly
Aeqsu_1926	COG0200	Binds to the 23S rRNA
Aeqsu_1927	COG0201	protein transport
Aeqsu_1928	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
Aeqsu_1929	COG0257	Belongs to the bacterial ribosomal protein bL36 family
Aeqsu_1930	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
Aeqsu_1931	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
Aeqsu_1932	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
Aeqsu_1933	COG0202	RNA polymerase activity
Aeqsu_1934	COG0203	ribosomal protein L17
Aeqsu_1936	COG0148	phosphopyruvate hydratase activity
Aeqsu_1939	COG1506	peptidase
Aeqsu_1939	COG0823	Involved in the tonB-independent uptake of proteins
Aeqsu_1940	COG3104	oligopeptide transport
Aeqsu_1941	COG3104	oligopeptide transport
Aeqsu_1943	COG0658	competence protein
Aeqsu_1943	COG2333	competence protein COMEC
Aeqsu_1946	COG0791	NLP P60 protein
Aeqsu_1947	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Aeqsu_1948	COG1181	Belongs to the D-alanine--D-alanine ligase family
Aeqsu_1950	COG0564	pseudouridine synthase activity
Aeqsu_1955	COG3591	Belongs to the peptidase S1B family
Aeqsu_1956	COG0596	Alpha beta hydrolase
Aeqsu_1957	COG2197	response regulator
Aeqsu_1959	COG0596	Alpha beta hydrolase
Aeqsu_1960	COG0477	Major facilitator Superfamily
Aeqsu_1961	COG2354	Protein conserved in bacteria
Aeqsu_1965	COG0488	(ABC) transporter
Aeqsu_1971	COG0745	RESPONSE REGULATOR receiver
Aeqsu_1975	COG3263	regulation of cellular component size
Aeqsu_1978	COG3022	response to hydroperoxide
Aeqsu_1983	COG3420	alginic acid biosynthetic process
Aeqsu_1984	COG0339	signal peptide processing
Aeqsu_1985	COG4717	serine-type aminopeptidase activity
Aeqsu_1986	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Aeqsu_1991	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Aeqsu_1992	COG1115	amino acid carrier protein
Aeqsu_1993	COG1115	amino acid carrier protein
Aeqsu_1994	COG1596	polysaccharide export
Aeqsu_1994	COG1555	photosystem II stabilization
Aeqsu_1995	COG1960	acyl-CoA dehydrogenase activity
Aeqsu_1997	COG0828	Belongs to the bacterial ribosomal protein bS21 family
Aeqsu_1998	COG4974	Belongs to the 'phage' integrase family
Aeqsu_1999	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
Aeqsu_2004	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Aeqsu_2006	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Aeqsu_2008	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
Aeqsu_2009	COG0081	regulation of translation
Aeqsu_2010	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
Aeqsu_2011	COG0222	ribosome binding
Aeqsu_2012	COG0085	RNA polymerase activity
Aeqsu_2013	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Aeqsu_2015	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
Aeqsu_2018	COG2885	chlorophyll binding
Aeqsu_2019	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
Aeqsu_2021	COG1482	cell wall glycoprotein biosynthetic process
Aeqsu_2025	COG0596	Alpha beta hydrolase
Aeqsu_2030	COG0300	oxidoreductase activity
Aeqsu_2035	COG4452	Inner membrane protein CreD
Aeqsu_2039	COG2877	3-deoxy-8-phosphooctulonate synthase activity
Aeqsu_2054	COG0438	transferase activity, transferring glycosyl groups
Aeqsu_2056	COG1216	Glycosyl transferase, family 2
Aeqsu_2056	COG0463	Glycosyl transferase, family 2
Aeqsu_2060	COG2884	Cell division ATP-binding protein ftsE
Aeqsu_2063	COG1943	Transposase
Aeqsu_2066	COG1574	metal-dependent hydrolase with the TIM-barrel fold
Aeqsu_2068	COG3876	Protein conserved in bacteria
Aeqsu_2069	COG0577	efflux transmembrane transporter activity
Aeqsu_2077	COG0326	Molecular chaperone. Has ATPase activity
Aeqsu_2079	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Aeqsu_2080	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
Aeqsu_2082	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Aeqsu_2084	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
Aeqsu_2086	COG0508	dehydrogenase complex catalyzes the overall conversion of
Aeqsu_2087	COG5002	protein histidine kinase activity
Aeqsu_2087	COG2176	DNA-directed DNA polymerase activity
Aeqsu_2088	COG0179	Fumarylacetoacetate (FAA) hydrolase
Aeqsu_2090	COG1058	Belongs to the CinA family
Aeqsu_2090	COG1546	Belongs to the CinA family
Aeqsu_2091	COG0227	Belongs to the bacterial ribosomal protein bL28 family
Aeqsu_2092	COG0267	Belongs to the bacterial ribosomal protein bL33 family
Aeqsu_2094	COG0552	protein localization to endoplasmic reticulum
Aeqsu_2095	COG0823	Involved in the tonB-independent uptake of proteins
Aeqsu_2095	COG1506	peptidase
Aeqsu_2098	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Aeqsu_2108	COG3279	Response regulator of the LytR AlgR family
Aeqsu_2109	COG3275	phosphorelay sensor kinase activity
Aeqsu_2118	COG0671	phosphoesterase, PA-phosphatase related
Aeqsu_2119	COG0534	Mate efflux family protein
Aeqsu_2128	COG1132	(ABC) transporter
Aeqsu_2134	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Aeqsu_2136	COG0386	Belongs to the glutathione peroxidase family
Aeqsu_2137	COG0302	gtp cyclohydrolase
Aeqsu_2148	COG1704	LemA family
Aeqsu_2153	COG0579	oxidoreductase
Aeqsu_2154	COG0492	ferredoxin-NADP+ reductase activity
Aeqsu_2166	COG0714	Associated with various cellular activities
Aeqsu_2173	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Aeqsu_2181	COG3655	Transcriptional regulator
Aeqsu_2184	COG3275	phosphorelay sensor kinase activity
Aeqsu_2188	COG2154	pterin-4-alpha-carbinolamine dehydratase
Aeqsu_2190	COG2066	Belongs to the glutaminase family
Aeqsu_2191	COG0404	The glycine cleavage system catalyzes the degradation of glycine
Aeqsu_2192	COG1012	belongs to the aldehyde dehydrogenase family
Aeqsu_2195	COG0671	phosphoesterase, PA-phosphatase related
Aeqsu_2198	COG0463	Glycosyl transferase, family 2
Aeqsu_2199	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Aeqsu_2201	COG1368	sulfuric ester hydrolase activity
Aeqsu_2204	COG1764	response to oxidative stress
Aeqsu_2213	COG0653	protein targeting
Aeqsu_2216	COG1136	(ABC) transporter
Aeqsu_2218	COG0488	(ABC) transporter
Aeqsu_2222	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
Aeqsu_2234	COG0463	Glycosyl transferase, family 2
Aeqsu_2234	COG1216	Glycosyl transferase, family 2
Aeqsu_2238	COG0438	transferase activity, transferring glycosyl groups
Aeqsu_2240	COG0438	transferase activity, transferring glycosyl groups
Aeqsu_2243	COG2852	Protein conserved in bacteria
Aeqsu_2255	COG0438	transferase activity, transferring glycosyl groups
Aeqsu_2256	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Aeqsu_2260	COG1137	ATPase activity
Aeqsu_2261	COG0805	protein transport
Aeqsu_2262	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
Aeqsu_2262	COG0517	IMP dehydrogenase activity
Aeqsu_2263	COG0514	ATP-dependent DNA helicase (RecQ)
Aeqsu_2267	COG1612	heme a metabolic process
Aeqsu_2268	COG0617	tRNA 3'-terminal CCA addition
Aeqsu_2269	COG0009	L-threonylcarbamoyladenylate synthase
Aeqsu_2271	COG1216	Glycosyl transferase, family 2
Aeqsu_2274	COG1215	transferase activity, transferring glycosyl groups
Aeqsu_2275	COG0463	Glycosyl transferase, family 2
Aeqsu_2276	COG0726	polysaccharide deacetylase
Aeqsu_2277	COG0463	Glycosyl transferase, family 2
Aeqsu_2278	COG1216	Glycosyl transferase, family 2
Aeqsu_2282	COG2171	N-acyltransferase activity
Aeqsu_2283	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
Aeqsu_2284	COG0242	peptide deformylase activity
Aeqsu_2286	COG3956	TIGRFAM MazG family protein
Aeqsu_2288	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
Aeqsu_2292	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Aeqsu_2294	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
Aeqsu_2296	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Aeqsu_2299	COG3547	Transposase (IS116 IS110 IS902 family)
Aeqsu_2303	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Aeqsu_2318	COG4974	Belongs to the 'phage' integrase family
Aeqsu_2326	COG2234	aminopeptidase activity
Aeqsu_2328	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
Aeqsu_2331	COG0308	aminopeptidase N
Aeqsu_2335	COG4585	Histidine kinase
Aeqsu_2339	COG0069	glutamate synthase activity
Aeqsu_2342	COG0009	L-threonylcarbamoyladenylate synthase
Aeqsu_2350	COG1575	Belongs to the MenA family. Type 1 subfamily
Aeqsu_2351	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
Aeqsu_2356	COG0463	Glycosyl transferase, family 2
Aeqsu_2357	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Aeqsu_2359	COG0488	(ABC) transporter
Aeqsu_2364	COG0010	Belongs to the arginase family
Aeqsu_2365	COG1228	amidohydrolase
Aeqsu_2369	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Aeqsu_2370	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
Aeqsu_2372	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
Aeqsu_2376	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Aeqsu_2380	COG4628	conserved protein (DUF2132)
Aeqsu_2383	COG0513	Belongs to the DEAD box helicase family
Aeqsu_2384	COG1234	tRNA 3'-trailer cleavage
Aeqsu_2385	COG0259	pyridoxamine-phosphate oxidase activity
Aeqsu_2387	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
Aeqsu_2391	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
Aeqsu_2393	COG1295	ribonuclease BN
Aeqsu_2395	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
Aeqsu_2396	COG3279	Response regulator of the LytR AlgR family
Aeqsu_2397	COG0360	Binds together with S18 to 16S ribosomal RNA
Aeqsu_2398	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
Aeqsu_2399	COG0359	binds to the 23S rRNA
Aeqsu_2401	COG0577	efflux transmembrane transporter activity
Aeqsu_2402	COG0124	histidyl-tRNA synthetase
Aeqsu_2411	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
Aeqsu_2412	COG0514	ATP-dependent DNA helicase (RecQ)
Aeqsu_2416	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
Aeqsu_2419	COG0415	Belongs to the DNA photolyase family
Aeqsu_2420	COG1028	Short-chain dehydrogenase reductase Sdr
Aeqsu_2434	COG1132	(ABC) transporter
Aeqsu_2435	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Aeqsu_2438	COG0254	rRNA binding
Aeqsu_2442	COG2814	Major facilitator Superfamily
Aeqsu_2445	COG1309	transcriptional regulator
Aeqsu_2446	COG4166	transmembrane transport
Aeqsu_2452	COG0542	response to heat
Aeqsu_2459	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
Aeqsu_2461	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
Aeqsu_2462	COG0596	Alpha beta hydrolase
Aeqsu_2462	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Aeqsu_2462	COG2226	methyltransferase
Aeqsu_2463	COG0590	tRNA wobble adenosine to inosine editing
Aeqsu_2466	COG1629	transport
Aeqsu_2466	COG4206	TonB-dependent receptor
Aeqsu_2469	COG0300	oxidoreductase activity
Aeqsu_2471	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
Aeqsu_2473	COG0488	(ABC) transporter
Aeqsu_2479	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
Aeqsu_2483	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Aeqsu_2491	COG2195	Cleaves the N-terminal amino acid of tripeptides
Aeqsu_2492	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Aeqsu_2494	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
Aeqsu_2495	COG0105	UTP biosynthetic process
Aeqsu_2498	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
Aeqsu_2500	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
Aeqsu_2502	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
Aeqsu_2507	COG0572	uridine kinase
Aeqsu_2509	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
Aeqsu_2511	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
Aeqsu_2511	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
Aeqsu_2515	COG0038	chloride channel
Aeqsu_2517	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
Aeqsu_2522	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Aeqsu_2524	COG1454	alcohol dehydrogenase
Aeqsu_2526	COG0217	transcriptional regulatory protein
Aeqsu_2527	COG3279	Response regulator of the LytR AlgR family
Aeqsu_2536	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
Aeqsu_2539	COG0037	tRNA processing
Aeqsu_2541	COG0205	6-phosphofructokinase activity
Aeqsu_2544	COG0166	Belongs to the GPI family
Aeqsu_2545	COG0606	chelatase, subunit chli
Aeqsu_2564	COG0612	Peptidase, M16
Aeqsu_2568	COG4585	Histidine kinase
Aeqsu_2569	COG2197	response regulator
Aeqsu_2570	COG0564	pseudouridine synthase activity
Aeqsu_2571	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
Aeqsu_2573	COG1760	l-serine dehydratase
Aeqsu_2574	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Aeqsu_2578	COG0443	Heat shock 70 kDa protein
Aeqsu_2582	COG2050	protein possibly involved in aromatic compounds catabolism
Aeqsu_2583	COG1169	isochorismate synthase
Aeqsu_2584	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
Aeqsu_2586	COG2996	Protein conserved in bacteria
Aeqsu_2598	COG0367	asparagine synthase
Aeqsu_2600	COG0513	Belongs to the DEAD box helicase family
Aeqsu_2601	COG0484	heat shock protein binding
Aeqsu_2605	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Aeqsu_2606	COG1104	cysteine desulfurase activity
Aeqsu_2608	COG0739	heme binding
Aeqsu_2611	COG1418	mRNA catabolic process
Aeqsu_2612	COG0656	L-ascorbic acid biosynthetic process
Aeqsu_2613	COG4974	Belongs to the 'phage' integrase family
Aeqsu_2620	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
Aeqsu_2621	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Aeqsu_2622	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Aeqsu_2623	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Aeqsu_2626	COG2270	Major facilitator Superfamily
Aeqsu_2629	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
Aeqsu_2631	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
Aeqsu_2636	COG1522	sequence-specific DNA binding
Aeqsu_2639	COG0693	protein deglycase activity
Aeqsu_2641	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
Aeqsu_2646	COG2204	response regulator
Aeqsu_2647	COG1078	dGTPase activity
Aeqsu_2648	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Aeqsu_2649	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
Aeqsu_2649	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
Aeqsu_2650	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Aeqsu_2651	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
Aeqsu_2652	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Aeqsu_2654	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
Aeqsu_2655	COG1028	Short-chain dehydrogenase reductase Sdr
Aeqsu_2662	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Aeqsu_2663	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
Aeqsu_2664	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
Aeqsu_2665	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Aeqsu_2666	COG0131	Imidazoleglycerol-phosphate dehydratase
Aeqsu_2666	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
Aeqsu_2667	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
Aeqsu_2668	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
Aeqsu_2669	COG0107	imidazoleglycerol-phosphate synthase activity
Aeqsu_2670	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
Aeqsu_2670	COG0140	phosphoribosyl-ATP diphosphatase activity
Aeqsu_2671	COG0598	Magnesium transport protein CorA
Aeqsu_2672	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Aeqsu_2673	COG2169	Transcriptional regulator
Aeqsu_2673	COG1917	Cupin 2, conserved barrel domain protein
Aeqsu_2674	COG0277	FAD linked oxidase domain protein
Aeqsu_2682	COG1278	Cold shock
Aeqsu_2684	COG0352	thiamine-phosphate diphosphorylase activity
Aeqsu_2689	COG4181	ATPase activity
Aeqsu_2690	COG1136	(ABC) transporter
Aeqsu_2690	COG0577	efflux transmembrane transporter activity
Aeqsu_2693	COG1979	alcohol dehydrogenase
Aeqsu_2694	COG1309	transcriptional regulator
Aeqsu_2701	COG2116	formate transmembrane transporter activity
Aeqsu_2703	COG0778	Nitroreductase
Aeqsu_2708	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Aeqsu_2709	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Aeqsu_2710	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
Aeqsu_2711	COG1028	Short-chain dehydrogenase reductase Sdr
Aeqsu_2712	COG3424	synthase
Aeqsu_2714	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aeqsu_2718	COG0022	dehydrogenase e1 component
Aeqsu_2723	COG0813	purine-nucleoside phosphorylase activity
Aeqsu_2726	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
Aeqsu_2728	COG3011	Protein conserved in bacteria
Aeqsu_2731	COG1301	dicarboxylic acid transport
Aeqsu_2732	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
Aeqsu_2733	COG2072	flavoprotein involved in K transport
Aeqsu_2734	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
Aeqsu_2737	COG3708	Transcriptional regulator
Aeqsu_2738	COG0277	FAD linked oxidase domain protein
Aeqsu_2738	COG0247	lactate metabolic process
Aeqsu_2741	COG0438	transferase activity, transferring glycosyl groups
Aeqsu_2742	COG1472	Belongs to the glycosyl hydrolase 3 family
Aeqsu_2744	COG2181	nitrate reductase activity
Aeqsu_2744	COG0247	lactate metabolic process
Aeqsu_2746	COG0247	lactate metabolic process
Aeqsu_2746	COG2181	nitrate reductase activity
Aeqsu_2747	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
Aeqsu_2748	COG0860	N-Acetylmuramoyl-L-alanine amidase
Aeqsu_2750	COG0251	oxidation-reduction process
Aeqsu_2756	COG2197	response regulator
Aeqsu_2759	COG0697	spore germination
Aeqsu_2761	COG4249	Peptidase C14 caspase catalytic subunit p20
Aeqsu_2761	COG2319	Wd-40 repeat
Aeqsu_2763	COG0540	Belongs to the ATCase OTCase family
Aeqsu_2764	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
Aeqsu_2770	COG0484	heat shock protein binding
Aeqsu_2773	COG0012	GTP binding
Aeqsu_2779	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Aeqsu_2781	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
Aeqsu_2782	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Aeqsu_2787	COG4771	TonB-dependent receptor
Aeqsu_2789	COG0302	gtp cyclohydrolase
Aeqsu_2790	COG1136	(ABC) transporter
Aeqsu_2794	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Aeqsu_2799	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
Aeqsu_2799	COG0321	lipoyl(octanoyl) transferase activity
Aeqsu_2801	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Aeqsu_2802	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Aeqsu_2805	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
Aeqsu_2811	COG0456	acetyltransferase
Aeqsu_2813	COG0156	8-amino-7-oxononanoate synthase activity
Aeqsu_2816	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
Aeqsu_2819	COG0022	dehydrogenase e1 component
Aeqsu_2821	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
Aeqsu_2826	COG0628	permease
Aeqsu_2834	COG3002	Belongs to the UPF0753 family
Aeqsu_2835	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Aeqsu_2837	COG0183	Belongs to the thiolase family
Aeqsu_2838	COG0791	NLP P60 protein
Aeqsu_2841	COG0542	response to heat
Aeqsu_2844	COG2986	histidine ammonia-lyase
Aeqsu_2845	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Aeqsu_2849	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Aeqsu_2850	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Aeqsu_2853	COG0116	Belongs to the methyltransferase superfamily
Aeqsu_2853	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
Aeqsu_2854	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Aeqsu_2856	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Aeqsu_2863	COG1363	Peptidase, m42
Aeqsu_2865	COG1115	amino acid carrier protein
Aeqsu_2869	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
Aeqsu_2870	COG1702	phosphate starvation-inducible protein PhoH
Aeqsu_2875	COG0592	DNA-directed DNA polymerase activity
Aeqsu_2879	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
Aeqsu_2881	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Aeqsu_2883	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Aeqsu_2886	COG1196	nuclear chromosome segregation
Aeqsu_2886	COG3264	Mechanosensitive ion channel
Aeqsu_2887	COG1012	belongs to the aldehyde dehydrogenase family
Aeqsu_2891	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Aeqsu_2892	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Aeqsu_2896	COG1047	Peptidyl-prolyl cis-trans
Aeqsu_2897	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
Aeqsu_2900	COG0095	Lipoate-protein ligase
Aeqsu_2902	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
Aeqsu_2906	COG1086	Polysaccharide biosynthesis protein
Aeqsu_2907	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Aeqsu_2910	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Aeqsu_2916	COG0367	asparagine synthase
Aeqsu_2918	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
Aeqsu_2919	COG0110	maltose O-acetyltransferase activity
Aeqsu_2922	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
Aeqsu_2923	COG2089	acid synthase
Aeqsu_2924	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
Aeqsu_2925	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
Aeqsu_2930	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
Aeqsu_2932	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
Aeqsu_2936	COG0175	sulfate reduction
Aeqsu_2938	COG0529	Catalyzes the synthesis of activated sulfate
Aeqsu_2941	COG0783	Belongs to the Dps family
Aeqsu_2946	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Aeqsu_2948	COG0705	Rhomboid family
Aeqsu_2952	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
Aeqsu_2953	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
Aeqsu_2954	COG0405	Gamma-glutamyltransferase
Aeqsu_2956	COG1611	Belongs to the LOG family
Aeqsu_2960	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
Aeqsu_2974	COG1393	Belongs to the ArsC family
Aeqsu_2978	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Aeqsu_2985	COG0424	maF-like protein
Aeqsu_2987	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
Aeqsu_2992	COG1333	cytochrome c biogenesis protein
Aeqsu_2992	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Aeqsu_2996	COG1595	DNA-templated transcription, initiation
Aeqsu_2998	COG1607	acyl-coa hydrolase
Aeqsu_3003	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Aeqsu_3011	COG0230	Belongs to the bacterial ribosomal protein bL34 family
Aeqsu_3017	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Aeqsu_3019	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Aeqsu_3019	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
Aeqsu_3023	COG1022	Amp-dependent synthetase and ligase
Aeqsu_3025	COG2361	Protein of unknown function DUF86
Aeqsu_3026	COG2076	Multidrug Resistance protein
Aeqsu_3030	COG1846	Transcriptional regulator
Aeqsu_3031	COG1024	Enoyl-CoA hydratase
Aeqsu_3031	COG1250	3-hydroxyacyl-CoA dehydrogenase
Aeqsu_3032	COG0183	Belongs to the thiolase family
Aeqsu_3033	COG1960	acyl-CoA dehydrogenase activity
Aeqsu_3040	COG1132	(ABC) transporter
Aeqsu_3041	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
Aeqsu_3049	COG1597	lipid kinase activity
Aeqsu_3058	COG0450	alkyl hydroperoxide reductase
Aeqsu_3061	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
Aeqsu_3064	COG1674	ftsk spoiiie
Aeqsu_3067	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Aeqsu_3067	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Aeqsu_3069	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Aeqsu_3081	COG4585	Histidine kinase
Aeqsu_3085	COG1506	peptidase
Aeqsu_3085	COG0823	Involved in the tonB-independent uptake of proteins
Aeqsu_3087	COG4206	TonB-dependent receptor
Aeqsu_3087	COG1629	transport
Aeqsu_3109	COG3237	CsbD-like
Aeqsu_3116	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
Aeqsu_3117	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Aeqsu_3118	COG0587	DNA-directed DNA polymerase activity
Aeqsu_3122	COG0322	excinuclease ABC activity
Aeqsu_3123	COG0210	DNA helicase
Aeqsu_3127	COG3665	Urea carboxylase-associated protein
Aeqsu_3133	COG0415	Belongs to the DNA photolyase family
Aeqsu_3135	COG3685	Protein conserved in bacteria
Aeqsu_3136	COG2207	Transcriptional regulator
Aeqsu_3141	COG0666	response to abiotic stimulus
Aeqsu_3144	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aeqsu_3149	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
Aeqsu_3150	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
Aeqsu_3157	COG3279	Response regulator of the LytR AlgR family
Aeqsu_3162	COG1595	DNA-templated transcription, initiation
Aeqsu_3169	COG1595	DNA-templated transcription, initiation
Aeqsu_3178	COG0701	Predicted permease
Aeqsu_3183	COG2132	Multicopper oxidase
Aeqsu_3187	COG2194	sulfuric ester hydrolase activity
Aeqsu_3191	COG5002	protein histidine kinase activity
Aeqsu_3192	COG0745	RESPONSE REGULATOR receiver
Aeqsu_3194	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Aeqsu_3201	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Aeqsu_3203	COG3237	CsbD-like
Aeqsu_3205	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
Aeqsu_3209	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
Aeqsu_3210	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
Aeqsu_3212	COG1250	3-hydroxyacyl-CoA dehydrogenase
Aeqsu_3214	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
Aeqsu_3216	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Aeqsu_3217	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
Aeqsu_3227	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
Aeqsu_3228	COG0497	DNA recombination
Aeqsu_3233	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Aeqsu_3237	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
Aeqsu_3238	COG1611	Belongs to the LOG family
Aeqsu_3239	COG2890	protein-(glutamine-N5) methyltransferase activity
Aeqsu_3240	COG0456	acetyltransferase
Aeqsu_3241	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Aeqsu_3241	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Aeqsu_3242	COG0697	spore germination
Aeqsu_3243	COG1739	Uncharacterized protein family UPF0029
Aeqsu_3244	COG0824	Thioesterase