AP3564_00090 SM00382 ATPases associated with a variety of cellular activities AP3564_00170 SM00382 ATPases associated with a variety of cellular activities AP3564_00175 SM01321 AP3564_00175 AP3564_00185 SM00382 ATPases associated with a variety of cellular activities AP3564_00205 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_00210 SM00729 Elongator protein 3, MiaB family, Radical SAM AP3564_00285 SM00382 ATPases associated with a variety of cellular activities AP3564_00290 SM00382 ATPases associated with a variety of cellular activities AP3564_00335 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_00385 SM00382 ATPases associated with a variety of cellular activities AP3564_00415 SM00382 ATPases associated with a variety of cellular activities AP3564_00430 SM00710 Parallel beta-helix repeats AP3564_00435 SM00448 cheY-homologous receiver domain AP3564_00435 SM00862 Transcriptional regulatory protein, C terminal AP3564_00440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_00440 SM00387 Histidine kinase-like ATPases AP3564_00440 SM00388 His Kinase A (phosphoacceptor) domain AP3564_00485 SM00849 Metallo-beta-lactamase superfamily AP3564_00520 SM00829 Enoylreductase AP3564_00530 SM00829 Enoylreductase AP3564_00585 SM00903 Flavin reductase like domain AP3564_00595 SM01130 AP3564_00595 AP3564_00620 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_00620 SM00895 AP3564_00620 AP3564_00655 SM00382 ATPases associated with a variety of cellular activities AP3564_00660 SM00382 ATPases associated with a variety of cellular activities AP3564_00680 SM00989 AP3564_00680 AP3564_00710 SM00460 Transglutaminase/protease-like homologues AP3564_00725 SM01001 AIR carboxylase AP3564_00735 SM00998 Adenylosuccinate lyase C-terminus AP3564_00750 SM01211 AP3564_00750 AP3564_00775 SM00798 AICARFT/IMPCHase bienzyme AP3564_00775 SM00851 MGS-like domain AP3564_00790 SM01209 AP3564_00790 AP3564_00790 SM01210 AP3564_00790 AP3564_00825 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AP3564_00825 SM00292 breast cancer carboxy-terminal domain AP3564_00825 SM00532 Ligase N family AP3564_00855 SM00845 GatB domain AP3564_00860 SM00046 Diacylglycerol kinase catalytic domain (presumed) AP3564_00970 SM00382 ATPases associated with a variety of cellular activities AP3564_01060 SM00382 ATPases associated with a variety of cellular activities AP3564_01105 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AP3564_01105 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AP3564_01115 SM00382 ATPases associated with a variety of cellular activities AP3564_01130 SM00382 ATPases associated with a variety of cellular activities AP3564_01145 SM00382 ATPases associated with a variety of cellular activities AP3564_01155 SM00062 Bacterial periplasmic substrate-binding proteins AP3564_01155 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AP3564_01175 SM00487 DEAD-like helicases superfamily AP3564_01175 SM00490 helicase superfamily c-terminal domain AP3564_01210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AP3564_01210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_01275 SM00354 helix_turn _helix lactose operon repressor AP3564_01285 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AP3564_01290 SM00530 Helix-turn-helix XRE-family like proteins AP3564_01295 SM00382 ATPases associated with a variety of cellular activities AP3564_01325 SM01060 AP3564_01325 AP3564_01330 SM00382 ATPases associated with a variety of cellular activities AP3564_01360 SM00382 ATPases associated with a variety of cellular activities AP3564_01405 SM00382 ATPases associated with a variety of cellular activities AP3564_01435 SM00062 Bacterial periplasmic substrate-binding proteins AP3564_01440 SM00382 ATPases associated with a variety of cellular activities AP3564_01470 SM00244 prohibitin homologues AP3564_01480 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_01490 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AP3564_01525 SM00226 Low molecular weight phosphatase family AP3564_01630 SM01007 Class II Aldolase and Adducin N-terminal domain AP3564_01670 SM00478 endonuclease III AP3564_01750 SM00725 NEAr Transporter domain AP3564_01840 SM00382 ATPases associated with a variety of cellular activities AP3564_01920 SM00382 ATPases associated with a variety of cellular activities AP3564_02000 SM00858 AP3564_02000 AP3564_02020 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_02020 SM00895 AP3564_02020 AP3564_02030 SM00347 helix_turn_helix multiple antibiotic resistance protein AP3564_02065 SM00382 ATPases associated with a variety of cellular activities AP3564_02110 SM00829 Enoylreductase AP3564_02170 SM00422 helix_turn_helix, mercury resistance AP3564_02265 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AP3564_02295 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AP3564_02335 SM00478 endonuclease III AP3564_02335 SM00525 AP3564_02335 AP3564_02370 SM00382 ATPases associated with a variety of cellular activities AP3564_02375 SM00028 Tetratricopeptide repeats AP3564_02390 SM00382 ATPases associated with a variety of cellular activities AP3564_02560 SM00091 PAS domain AP3564_02560 SM00382 ATPases associated with a variety of cellular activities AP3564_02570 SM01120 AP3564_02570 AP3564_02660 SM00382 ATPases associated with a variety of cellular activities AP3564_02670 SM00861 Transketolase, pyrimidine binding domain AP3564_02680 SM00382 ATPases associated with a variety of cellular activities AP3564_02680 SM00448 cheY-homologous receiver domain AP3564_02685 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AP3564_02685 SM00091 PAS domain AP3564_02685 SM00387 Histidine kinase-like ATPases AP3564_02685 SM00388 His Kinase A (phosphoacceptor) domain AP3564_02700 SM00829 Enoylreductase AP3564_02725 SM00420 helix_turn_helix, Deoxyribose operon repressor AP3564_02725 SM01134 AP3564_02725 AP3564_02760 SM00873 B3/4 domain AP3564_02765 SM00567 E-Z type HEAT repeats AP3564_02785 SM00763 PrkA AAA domain AP3564_02850 SM00116 Domain in cystathionine beta-synthase and other proteins. AP3564_02955 SM00382 ATPases associated with a variety of cellular activities AP3564_02960 SM00382 ATPases associated with a variety of cellular activities AP3564_02970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AP3564_03060 SM00729 Elongator protein 3, MiaB family, Radical SAM AP3564_03085 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AP3564_03115 SM00347 helix_turn_helix multiple antibiotic resistance protein AP3564_03150 SM00382 ATPases associated with a variety of cellular activities AP3564_03180 SM00354 helix_turn _helix lactose operon repressor AP3564_03190 SM00849 Metallo-beta-lactamase superfamily AP3564_03205 SM00382 ATPases associated with a variety of cellular activities AP3564_03210 SM00530 Helix-turn-helix XRE-family like proteins AP3564_03230 SM00382 ATPases associated with a variety of cellular activities AP3564_03230 SM00843 AP3564_03230 AP3564_03260 SM00830 Chorismate mutase type II AP3564_03265 SM00354 helix_turn _helix lactose operon repressor AP3564_03275 SM00116 Domain in cystathionine beta-synthase and other proteins. AP3564_03300 SM00363 S4 RNA-binding domain AP3564_03305 SM00060 Fibronectin type 3 domain AP3564_03430 SM00382 ATPases associated with a variety of cellular activities AP3564_03525 SM00829 Enoylreductase AP3564_03530 SM01133 AP3564_03530 AP3564_03620 SM00829 Enoylreductase AP3564_03625 SM01133 AP3564_03625 AP3564_03715 SM00829 Enoylreductase AP3564_03730 SM00984 UDP binding domain AP3564_03765 SM00487 DEAD-like helicases superfamily AP3564_03765 SM00490 helicase superfamily c-terminal domain AP3564_03780 SM00530 Helix-turn-helix XRE-family like proteins AP3564_03830 SM00797 Allophanate hydrolase subunit 2 AP3564_03840 SM00796 Allophanate hydrolase subunit 1 AP3564_03885 SM00382 ATPases associated with a variety of cellular activities AP3564_03960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AP3564_03960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_03965 SM00226 Low molecular weight phosphatase family AP3564_03995 SM00937 AP3564_03995 AP3564_04020 SM00357 Cold shock protein domain AP3564_04020 SM00382 ATPases associated with a variety of cellular activities AP3564_04020 SM00959 Rho termination factor, N-terminal domain AP3564_04045 SM00448 cheY-homologous receiver domain AP3564_04075 SM00836 DALR anticodon binding domain AP3564_04075 SM01016 Arginyl tRNA synthetase N terminal dom AP3564_04120 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AP3564_04200 SM00986 Uracil DNA glycosylase superfamily AP3564_04200 SM00987 UreE urease accessory protein, C-terminal domain AP3564_04285 SM00062 Bacterial periplasmic substrate-binding proteins AP3564_04285 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AP3564_04295 SM00382 ATPases associated with a variety of cellular activities AP3564_04325 SM00867 YceI-like domain AP3564_04340 SM00382 ATPases associated with a variety of cellular activities AP3564_04345 SM00382 ATPases associated with a variety of cellular activities AP3564_04380 SM00861 Transketolase, pyrimidine binding domain AP3564_04390 SM00382 ATPases associated with a variety of cellular activities AP3564_04400 SM00914 AP3564_04400 AP3564_04425 SM00382 ATPases associated with a variety of cellular activities AP3564_04430 SM00062 Bacterial periplasmic substrate-binding proteins AP3564_04460 SM00448 cheY-homologous receiver domain AP3564_04460 SM00862 Transcriptional regulatory protein, C terminal AP3564_04465 SM00387 Histidine kinase-like ATPases AP3564_04470 SM00382 ATPases associated with a variety of cellular activities AP3564_04490 SM00448 cheY-homologous receiver domain AP3564_04495 SM00387 Histidine kinase-like ATPases AP3564_04515 SM00382 ATPases associated with a variety of cellular activities AP3564_04605 SM00487 DEAD-like helicases superfamily AP3564_04620 SM00530 Helix-turn-helix XRE-family like proteins AP3564_04630 SM00420 helix_turn_helix, Deoxyribose operon repressor AP3564_04630 SM01134 AP3564_04630 AP3564_04665 SM00420 helix_turn_helix, Deoxyribose operon repressor AP3564_04665 SM01134 AP3564_04665 AP3564_04710 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AP3564_04715 SM00849 Metallo-beta-lactamase superfamily AP3564_04730 SM00091 PAS domain AP3564_04730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_04730 SM00387 Histidine kinase-like ATPases AP3564_04730 SM00388 His Kinase A (phosphoacceptor) domain AP3564_04735 SM00448 cheY-homologous receiver domain AP3564_04735 SM00862 Transcriptional regulatory protein, C terminal AP3564_04750 SM00788 Adenylosuccinate synthetase AP3564_04755 SM00382 ATPases associated with a variety of cellular activities AP3564_04765 SM00267 diguanylate cyclase AP3564_04805 SM00470 ParB-like nuclease domain AP3564_04820 SM00470 ParB-like nuclease domain AP3564_04830 SM01228 AP3564_04830 AP3564_04840 SM00393 Putative single-stranded nucleic acids-binding domain AP3564_04840 SM01245 AP3564_04840 AP3564_04865 SM00382 ATPases associated with a variety of cellular activities AP3564_04865 SM00760 Bacterial dnaA protein helix-turn-helix domain AP3564_04870 SM00480 DNA polymerase III beta subunit AP3564_04885 SM00387 Histidine kinase-like ATPases AP3564_04885 SM00433 TopoisomeraseII AP3564_04890 SM00434 DNA Topoisomerase IV AP3564_04895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AP3564_04930 SM00116 Domain in cystathionine beta-synthase and other proteins. AP3564_04930 SM01240 AP3564_04930 AP3564_04935 SM00936 Penicillin-binding protein 5, C-terminal domain AP3564_04985 SM00257 Lysin motif AP3564_04985 SM00636 AP3564_04985 AP3564_05000 SM00382 ATPases associated with a variety of cellular activities AP3564_05010 SM00493 AP3564_05010 AP3564_05090 SM00966 SpoVT / AbrB like domain AP3564_05105 SM01208 AP3564_05105 AP3564_05110 SM00493 AP3564_05110 AP3564_05115 SM00650 Ribosomal RNA adenine dimethylases AP3564_05160 SM01400 AP3564_05160 AP3564_05180 SM00487 DEAD-like helicases superfamily AP3564_05180 SM00490 helicase superfamily c-terminal domain AP3564_05180 SM00982 AP3564_05180 AP3564_05180 SM01058 CarD-like/TRCF domain AP3564_05185 SM00966 SpoVT / AbrB like domain AP3564_05220 SM00363 S4 RNA-binding domain AP3564_05240 SM00316 Ribosomal protein S1-like RNA-binding domain AP3564_05255 SM00331 Sigma factor PP2C-like phosphatases AP3564_05255 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AP3564_05265 SM00220 Serine/Threonine protein kinases, catalytic domain AP3564_05270 SM00977 TilS substrate C-terminal domain AP3564_05280 SM00382 ATPases associated with a variety of cellular activities AP3564_05325 SM00905 Dihydroneopterin aldolase AP3564_05335 SM00530 Helix-turn-helix XRE-family like proteins AP3564_05450 SM00382 ATPases associated with a variety of cellular activities AP3564_05535 SM00382 ATPases associated with a variety of cellular activities AP3564_05540 SM00382 ATPases associated with a variety of cellular activities AP3564_05545 SM01208 AP3564_05545 AP3564_05585 SM00382 ATPases associated with a variety of cellular activities AP3564_05585 SM01086 C-terminal, D2-small domain, of ClpB protein AP3564_05590 SM00382 ATPases associated with a variety of cellular activities AP3564_05600 SM00670 Large family of predicted nucleotide-binding domains AP3564_05625 SM00840 AP3564_05625 AP3564_05630 SM00535 Ribonuclease III family AP3564_05635 SM00967 RNA 2'-O ribose methyltransferase substrate binding AP3564_05655 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AP3564_05655 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AP3564_05660 SM00649 Ribosomal protein L11/L12 AP3564_05690 SM00663 RNA polymerase I subunit A N-terminus AP3564_05710 SM00838 Elongation factor G C-terminus AP3564_05710 SM00889 Elongation factor G, domain IV AP3564_05720 SM01403 AP3564_05720 AP3564_05740 SM01382 AP3564_05740 AP3564_05740 SM01383 AP3564_05740 AP3564_05755 SM00322 K homology RNA-binding domain AP3564_05775 SM01374 AP3564_05775 AP3564_05780 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AP3564_05845 SM00316 Ribosomal protein S1-like RNA-binding domain AP3564_05865 SM00662 RNA polymerases D AP3564_05875 SM00382 ATPases associated with a variety of cellular activities AP3564_05880 SM00382 ATPases associated with a variety of cellular activities AP3564_05935 SM00646 AP3564_05935 AP3564_05950 SM01251 AP3564_05950 AP3564_06040 SM00422 helix_turn_helix, mercury resistance AP3564_06080 SM00422 helix_turn_helix, mercury resistance AP3564_06085 SM01091 Transporter associated domain AP3564_06135 SM00354 helix_turn _helix lactose operon repressor AP3564_06145 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AP3564_06175 SM00829 Enoylreductase AP3564_06290 SM00346 helix_turn_helix isocitrate lyase regulation AP3564_06310 SM00062 Bacterial periplasmic substrate-binding proteins AP3564_06310 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AP3564_06320 SM00382 ATPases associated with a variety of cellular activities AP3564_06365 SM00855 Phosphoglycerate mutase family AP3564_06375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_06375 SM00387 Histidine kinase-like ATPases AP3564_06380 SM00342 helix_turn_helix, arabinose operon control protein AP3564_06380 SM00448 cheY-homologous receiver domain AP3564_06395 SM00382 ATPases associated with a variety of cellular activities AP3564_06440 SM00382 ATPases associated with a variety of cellular activities AP3564_06450 SM00729 Elongator protein 3, MiaB family, Radical SAM AP3564_06460 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_06520 SM00903 Flavin reductase like domain AP3564_06565 SM00859 Semialdehyde dehydrogenase, NAD binding domain AP3564_06580 SM00346 helix_turn_helix isocitrate lyase regulation AP3564_06595 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_06595 SM00895 AP3564_06595 AP3564_06680 SM00382 ATPases associated with a variety of cellular activities AP3564_06705 SM00448 cheY-homologous receiver domain AP3564_06705 SM00862 Transcriptional regulatory protein, C terminal AP3564_06710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_06710 SM00387 Histidine kinase-like ATPases AP3564_06710 SM00388 His Kinase A (phosphoacceptor) domain AP3564_06765 SM00487 DEAD-like helicases superfamily AP3564_06765 SM00490 helicase superfamily c-terminal domain AP3564_06795 SM01005 Alanine racemase, C-terminal domain AP3564_06825 SM00387 Histidine kinase-like ATPases AP3564_06830 SM00331 Sigma factor PP2C-like phosphatases AP3564_06850 SM00331 Sigma factor PP2C-like phosphatases AP3564_06850 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AP3564_06855 SM00316 Ribosomal protein S1-like RNA-binding domain AP3564_06855 SM00732 Likely ribonuclease with RNase H fold. AP3564_06860 SM00731 SprT homologues. AP3564_06965 SM00382 ATPases associated with a variety of cellular activities AP3564_06970 SM00881 CoA binding domain AP3564_06995 SM00883 Chaperonin 10 Kd subunit AP3564_07075 SM00382 ATPases associated with a variety of cellular activities AP3564_07100 SM00835 Cupin AP3564_07105 SM00420 helix_turn_helix, Deoxyribose operon repressor AP3564_07105 SM01134 AP3564_07105 AP3564_07145 SM00382 ATPases associated with a variety of cellular activities AP3564_07185 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_07185 SM00895 AP3564_07185 AP3564_07225 SM00797 Allophanate hydrolase subunit 2 AP3564_07230 SM00796 Allophanate hydrolase subunit 1 AP3564_07235 SM00346 helix_turn_helix isocitrate lyase regulation AP3564_07315 SM00382 ATPases associated with a variety of cellular activities AP3564_07345 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_07360 SM00729 Elongator protein 3, MiaB family, Radical SAM AP3564_07365 SM00852 Probable molybdopterin binding domain AP3564_07380 SM00382 ATPases associated with a variety of cellular activities AP3564_07395 SM00529 Helix-turn-helix diphteria tox regulatory element AP3564_07440 SM00530 Helix-turn-helix XRE-family like proteins AP3564_07455 SM00858 AP3564_07455 AP3564_07490 SM00861 Transketolase, pyrimidine binding domain AP3564_07510 SM00448 cheY-homologous receiver domain AP3564_07515 SM00091 PAS domain AP3564_07515 SM00387 Histidine kinase-like ATPases AP3564_07560 SM00984 UDP binding domain AP3564_07605 SM00047 Lysozyme subfamily 2 AP3564_07605 SM00287 Bacterial SH3 domain homologues AP3564_07645 SM00387 Histidine kinase-like ATPases AP3564_07650 SM00421 helix_turn_helix, Lux Regulon AP3564_07650 SM00448 cheY-homologous receiver domain AP3564_07660 SM00487 DEAD-like helicases superfamily AP3564_07660 SM00490 helicase superfamily c-terminal domain AP3564_07775 SM00966 SpoVT / AbrB like domain AP3564_07800 SM00829 Enoylreductase AP3564_07820 SM00257 Lysin motif AP3564_07835 SM00091 PAS domain AP3564_07835 SM00382 ATPases associated with a variety of cellular activities AP3564_07865 SM01061 CAT RNA binding domain AP3564_07885 SM00062 Bacterial periplasmic substrate-binding proteins AP3564_07895 SM00382 ATPases associated with a variety of cellular activities AP3564_07900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AP3564_07900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_07915 SM00796 Allophanate hydrolase subunit 1 AP3564_07915 SM00797 Allophanate hydrolase subunit 2 AP3564_07915 SM00878 Biotin carboxylase C-terminal domain AP3564_07945 SM01133 AP3564_07945 AP3564_08040 SM00382 ATPases associated with a variety of cellular activities AP3564_08050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AP3564_08055 SM01007 Class II Aldolase and Adducin N-terminal domain AP3564_08060 SM00420 helix_turn_helix, Deoxyribose operon repressor AP3564_08060 SM01134 AP3564_08060 AP3564_08080 SM00382 ATPases associated with a variety of cellular activities AP3564_08105 SM01007 Class II Aldolase and Adducin N-terminal domain AP3564_08130 SM00882 Coenzyme A transferase AP3564_08135 SM00882 Coenzyme A transferase AP3564_08160 SM00382 ATPases associated with a variety of cellular activities AP3564_08175 SM00421 helix_turn_helix, Lux Regulon AP3564_08175 SM00448 cheY-homologous receiver domain AP3564_08180 SM00382 ATPases associated with a variety of cellular activities AP3564_08195 SM00382 ATPases associated with a variety of cellular activities AP3564_08225 SM00506 Appr-1"-p processing enzyme AP3564_08230 SM00382 ATPases associated with a variety of cellular activities AP3564_08255 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AP3564_08315 SM00346 helix_turn_helix isocitrate lyase regulation AP3564_08320 SM00346 helix_turn_helix isocitrate lyase regulation AP3564_08375 SM00957 SecA DEAD-like domain AP3564_08375 SM00958 SecA preprotein cross-linking domain AP3564_08380 SM00937 AP3564_08380 AP3564_08390 SM00382 ATPases associated with a variety of cellular activities AP3564_08405 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AP3564_08405 SM00245 tail specific protease AP3564_08410 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AP3564_08425 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AP3564_08445 SM01321 AP3564_08445 AP3564_08465 SM00487 DEAD-like helicases superfamily AP3564_08465 SM00490 helicase superfamily c-terminal domain AP3564_08470 SM00382 ATPases associated with a variety of cellular activities AP3564_08485 SM00062 Bacterial periplasmic substrate-binding proteins AP3564_08580 SM00028 Tetratricopeptide repeats AP3564_08630 SM00850 LytTr DNA-binding domain AP3564_08710 SM01130 AP3564_08710 AP3564_08715 SM00354 helix_turn _helix lactose operon repressor AP3564_08735 SM00382 ATPases associated with a variety of cellular activities AP3564_08770 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AP3564_08790 SM01192 AP3564_08790 AP3564_08790 SM01193 AP3564_08790 AP3564_08810 SM00316 Ribosomal protein S1-like RNA-binding domain AP3564_08810 SM00357 Cold shock protein domain AP3564_08810 SM00955 AP3564_08810 AP3564_08835 SM00422 helix_turn_helix, mercury resistance AP3564_08870 SM00382 ATPases associated with a variety of cellular activities AP3564_08920 SM00493 AP3564_08920 AP3564_08935 SM00382 ATPases associated with a variety of cellular activities AP3564_08935 SM00930 AP3564_08935 AP3564_08955 SM00382 ATPases associated with a variety of cellular activities AP3564_09010 SM00729 Elongator protein 3, MiaB family, Radical SAM AP3564_09135 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AP3564_09135 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AP3564_09140 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AP3564_09180 SM00091 PAS domain AP3564_09180 SM00382 ATPases associated with a variety of cellular activities AP3564_09205 SM00387 Histidine kinase-like ATPases AP3564_09210 SM00421 helix_turn_helix, Lux Regulon AP3564_09210 SM00448 cheY-homologous receiver domain AP3564_09260 SM00479 AP3564_09260 AP3564_09265 SM01298 AP3564_09265 AP3564_09290 SM00344 helix_turn_helix ASNC type AP3564_09300 SM00316 Ribosomal protein S1-like RNA-binding domain AP3564_09500 SM01234 AP3564_09500 AP3564_09530 SM00382 ATPases associated with a variety of cellular activities AP3564_09570 SM00014 Acid phosphatase homologues AP3564_09605 SM00729 Elongator protein 3, MiaB family, Radical SAM AP3564_09615 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_09630 SM00450 Rhodanese Homology Domain AP3564_09665 SM00363 S4 RNA-binding domain AP3564_09670 SM00420 helix_turn_helix, Deoxyribose operon repressor AP3564_09790 SM00914 AP3564_09790 AP3564_09895 SM00382 ATPases associated with a variety of cellular activities AP3564_09910 SM00729 Elongator protein 3, MiaB family, Radical SAM AP3564_09945 SM00642 Alpha-amylase domain AP3564_09975 SM01018 B12 binding domain AP3564_09995 SM01321 AP3564_09995 AP3564_10030 SM00859 Semialdehyde dehydrogenase, NAD binding domain AP3564_10050 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AP3564_10055 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AP3564_10055 SM01209 AP3564_10055 AP3564_10070 SM00382 ATPases associated with a variety of cellular activities AP3564_10070 SM01086 C-terminal, D2-small domain, of ClpB protein AP3564_10105 SM00825 Beta-ketoacyl synthase AP3564_10145 SM00155 Phospholipase D. Active site motifs. AP3564_10175 SM01118 AP3564_10175 AP3564_10185 SM00954 Region found in RelA / SpoT proteins AP3564_10200 SM00116 Domain in cystathionine beta-synthase and other proteins. AP3564_10200 SM00924 MgtE intracellular N domain AP3564_10320 SM00382 ATPases associated with a variety of cellular activities AP3564_10330 SM00062 Bacterial periplasmic substrate-binding proteins AP3564_10370 SM00849 Metallo-beta-lactamase superfamily AP3564_10380 SM00729 Elongator protein 3, MiaB family, Radical SAM AP3564_10385 SM00342 helix_turn_helix, arabinose operon control protein AP3564_10385 SM00448 cheY-homologous receiver domain AP3564_10395 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AP3564_10405 SM01092 CO dehydrogenase flavoprotein C-terminal domain AP3564_10590 SM00642 Alpha-amylase domain AP3564_10595 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_10595 SM00866 AP3564_10595 AP3564_10605 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AP3564_10645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_10645 SM00387 Histidine kinase-like ATPases AP3564_10645 SM00388 His Kinase A (phosphoacceptor) domain AP3564_10650 SM00448 cheY-homologous receiver domain AP3564_10650 SM00862 Transcriptional regulatory protein, C terminal AP3564_10730 SM00354 helix_turn _helix lactose operon repressor AP3564_10740 SM00640 Glycosyl hydrolases family 32 AP3564_10775 SM00833 Cobalamin synthesis protein cobW C-terminal domain AP3564_10850 SM00487 DEAD-like helicases superfamily AP3564_10850 SM00490 helicase superfamily c-terminal domain AP3564_10925 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_10925 SM00895 AP3564_10925 AP3564_11000 SM00382 ATPases associated with a variety of cellular activities AP3564_11005 SM00382 ATPases associated with a variety of cellular activities AP3564_11025 SM00382 ATPases associated with a variety of cellular activities AP3564_11045 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AP3564_11045 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AP3564_11125 SM00382 ATPases associated with a variety of cellular activities AP3564_11135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AP3564_11160 SM00530 Helix-turn-helix XRE-family like proteins AP3564_11165 SM00346 helix_turn_helix isocitrate lyase regulation AP3564_11195 SM00346 helix_turn_helix isocitrate lyase regulation AP3564_11245 SM00849 Metallo-beta-lactamase superfamily AP3564_11310 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_11315 SM00382 ATPases associated with a variety of cellular activities AP3564_11410 SM00257 Lysin motif AP3564_11430 SM00646 AP3564_11430 AP3564_11445 SM00382 ATPases associated with a variety of cellular activities AP3564_11475 SM00855 Phosphoglycerate mutase family AP3564_11495 SM00422 helix_turn_helix, mercury resistance AP3564_11500 SM01091 Transporter associated domain AP3564_11525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AP3564_11525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_11530 SM00347 helix_turn_helix multiple antibiotic resistance protein AP3564_11535 SM00052 Putative diguanylate phosphodiesterase AP3564_11535 SM00267 diguanylate cyclase AP3564_11555 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AP3564_11570 SM00116 Domain in cystathionine beta-synthase and other proteins. AP3564_11570 SM00382 ATPases associated with a variety of cellular activities AP3564_11610 SM00729 Elongator protein 3, MiaB family, Radical SAM AP3564_11615 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_11615 SM00895 AP3564_11615 AP3564_11640 SM00091 PAS domain AP3564_11640 SM00387 Histidine kinase-like ATPases AP3564_11640 SM00388 His Kinase A (phosphoacceptor) domain AP3564_11680 SM00387 Histidine kinase-like ATPases AP3564_11680 SM00388 His Kinase A (phosphoacceptor) domain AP3564_11685 SM00347 helix_turn_helix multiple antibiotic resistance protein AP3564_11705 SM00382 ATPases associated with a variety of cellular activities AP3564_11705 SM01086 C-terminal, D2-small domain, of ClpB protein AP3564_11795 SM00318 Staphylococcal nuclease homologues AP3564_11825 SM01061 CAT RNA binding domain AP3564_11845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AP3564_11845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_11870 SM00091 PAS domain AP3564_11870 SM00387 Histidine kinase-like ATPases AP3564_11870 SM00388 His Kinase A (phosphoacceptor) domain AP3564_11895 SM00260 Two component signalling adaptor domain AP3564_11895 SM00448 cheY-homologous receiver domain AP3564_11905 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AP3564_11930 SM00052 Putative diguanylate phosphodiesterase AP3564_11940 SM00382 ATPases associated with a variety of cellular activities AP3564_12035 SM00382 ATPases associated with a variety of cellular activities AP3564_12060 SM00382 ATPases associated with a variety of cellular activities AP3564_12065 SM00382 ATPases associated with a variety of cellular activities AP3564_12085 SM00988 UreE urease accessory protein, N-terminal domain AP3564_12125 SM00382 ATPases associated with a variety of cellular activities AP3564_12185 SM01092 CO dehydrogenase flavoprotein C-terminal domain AP3564_12190 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AP3564_12260 SM00487 DEAD-like helicases superfamily AP3564_12260 SM00490 helicase superfamily c-terminal domain AP3564_12285 SM00490 helicase superfamily c-terminal domain AP3564_12335 SM00420 helix_turn_helix, Deoxyribose operon repressor AP3564_12335 SM01134 AP3564_12335 AP3564_12385 SM00344 helix_turn_helix ASNC type AP3564_12420 SM00382 ATPases associated with a variety of cellular activities AP3564_12425 SM00382 ATPases associated with a variety of cellular activities AP3564_12430 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_12460 SM00419 helix_turn_helix, cAMP Regulatory protein AP3564_12480 SM00382 ATPases associated with a variety of cellular activities AP3564_12560 SM00849 Metallo-beta-lactamase superfamily AP3564_12585 SM00861 Transketolase, pyrimidine binding domain AP3564_12610 SM00530 Helix-turn-helix XRE-family like proteins AP3564_12635 SM00382 ATPases associated with a variety of cellular activities AP3564_12680 SM01321 AP3564_12680 AP3564_12710 SM00838 Elongation factor G C-terminus AP3564_12730 SM00670 Large family of predicted nucleotide-binding domains AP3564_12750 SM00878 Biotin carboxylase C-terminal domain AP3564_12785 SM00357 Cold shock protein domain AP3564_12805 SM00567 E-Z type HEAT repeats AP3564_12805 SM00932 Scaffold protein Nfu/NifU N terminal AP3564_12865 SM00382 ATPases associated with a variety of cellular activities AP3564_12920 SM00729 Elongator protein 3, MiaB family, Radical SAM AP3564_12920 SM00876 Biotin and Thiamin Synthesis associated domain AP3564_12940 SM00219 Tyrosine kinase, catalytic domain AP3564_12955 SM00014 Acid phosphatase homologues AP3564_12975 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AP3564_12975 SM00245 tail specific protease AP3564_13015 SM00257 Lysin motif AP3564_13050 SM00382 ATPases associated with a variety of cellular activities AP3564_13055 SM00327 von Willebrand factor (vWF) type A domain AP3564_13060 SM00861 Transketolase, pyrimidine binding domain AP3564_13120 SM00382 ATPases associated with a variety of cellular activities AP3564_13285 SM00849 Metallo-beta-lactamase superfamily AP3564_13310 SM00530 Helix-turn-helix XRE-family like proteins AP3564_13355 SM00091 PAS domain AP3564_13360 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AP3564_13370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_13380 SM00331 Sigma factor PP2C-like phosphatases AP3564_13395 SM00347 helix_turn_helix multiple antibiotic resistance protein AP3564_13460 SM00387 Histidine kinase-like ATPases AP3564_13465 SM00448 cheY-homologous receiver domain AP3564_13465 SM00850 LytTr DNA-binding domain AP3564_13545 SM00347 helix_turn_helix multiple antibiotic resistance protein AP3564_13555 SM00257 Lysin motif AP3564_13555 SM00636 AP3564_13555 AP3564_13570 SM00357 Cold shock protein domain AP3564_13575 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AP3564_13575 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AP3564_13575 SM00493 AP3564_13575 AP3564_13640 SM00421 helix_turn_helix, Lux Regulon AP3564_13640 SM00448 cheY-homologous receiver domain AP3564_13685 SM00642 Alpha-amylase domain AP3564_13690 SM00116 Domain in cystathionine beta-synthase and other proteins. AP3564_13705 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AP3564_13710 SM00421 helix_turn_helix, Lux Regulon AP3564_13710 SM00448 cheY-homologous receiver domain AP3564_13720 SM00642 Alpha-amylase domain AP3564_13765 SM00382 ATPases associated with a variety of cellular activities AP3564_13805 SM00342 helix_turn_helix, arabinose operon control protein AP3564_13810 SM00642 Alpha-amylase domain AP3564_13830 SM00642 Alpha-amylase domain AP3564_13840 SM00354 helix_turn _helix lactose operon repressor AP3564_13930 SM00448 cheY-homologous receiver domain AP3564_13930 SM00862 Transcriptional regulatory protein, C terminal AP3564_13935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_13935 SM00387 Histidine kinase-like ATPases AP3564_13935 SM00388 His Kinase A (phosphoacceptor) domain AP3564_13940 SM00257 Lysin motif AP3564_13940 SM00636 AP3564_13940 AP3564_13955 SM00450 Rhodanese Homology Domain AP3564_13955 SM00849 Metallo-beta-lactamase superfamily AP3564_13985 SM00450 Rhodanese Homology Domain AP3564_13990 SM00450 Rhodanese Homology Domain AP3564_13995 SM00450 Rhodanese Homology Domain AP3564_14000 SM00450 Rhodanese Homology Domain AP3564_14000 SM00849 Metallo-beta-lactamase superfamily AP3564_14090 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AP3564_14155 SM00091 PAS domain AP3564_14155 SM00382 ATPases associated with a variety of cellular activities AP3564_14160 SM00849 Metallo-beta-lactamase superfamily AP3564_14185 SM00530 Helix-turn-helix XRE-family like proteins AP3564_14225 SM00382 ATPases associated with a variety of cellular activities AP3564_14235 SM00382 ATPases associated with a variety of cellular activities AP3564_14255 SM00878 Biotin carboxylase C-terminal domain AP3564_14280 SM00382 ATPases associated with a variety of cellular activities AP3564_14330 SM00382 ATPases associated with a variety of cellular activities AP3564_14350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AP3564_14360 SM00226 Low molecular weight phosphatase family AP3564_14365 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_14380 SM00347 helix_turn_helix multiple antibiotic resistance protein AP3564_14435 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_14440 SM00382 ATPases associated with a variety of cellular activities AP3564_14465 SM00382 ATPases associated with a variety of cellular activities AP3564_14485 SM00448 cheY-homologous receiver domain AP3564_14485 SM00862 Transcriptional regulatory protein, C terminal AP3564_14490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_14490 SM00387 Histidine kinase-like ATPases AP3564_14490 SM00388 His Kinase A (phosphoacceptor) domain AP3564_14510 SM00382 ATPases associated with a variety of cellular activities AP3564_14530 SM00342 helix_turn_helix, arabinose operon control protein AP3564_14555 SM00487 DEAD-like helicases superfamily AP3564_14615 SM00852 Probable molybdopterin binding domain AP3564_14625 SM00852 Probable molybdopterin binding domain AP3564_14665 SM00729 Elongator protein 3, MiaB family, Radical SAM AP3564_14670 SM00100 Cyclic nucleotide-monophosphate binding domain AP3564_14670 SM00419 helix_turn_helix, cAMP Regulatory protein AP3564_14695 SM00434 DNA Topoisomerase IV AP3564_14700 SM00387 Histidine kinase-like ATPases AP3564_14700 SM00433 TopoisomeraseII AP3564_14705 SM00881 CoA binding domain AP3564_14710 SM01207 AP3564_14710 AP3564_14715 SM00479 AP3564_14715 AP3564_14730 SM00854 Bacterial capsule synthesis protein PGA_cap AP3564_14795 SM00448 cheY-homologous receiver domain AP3564_14815 SM00861 Transketolase, pyrimidine binding domain AP3564_14825 SM00857 Resolvase, N terminal domain AP3564_14830 SM00257 Lysin motif AP3564_14840 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AP3564_14845 SM00563 Phosphate acyltransferases AP3564_14875 SM00354 helix_turn _helix lactose operon repressor AP3564_14900 SM00387 Histidine kinase-like ATPases AP3564_14905 SM00421 helix_turn_helix, Lux Regulon AP3564_14905 SM00448 cheY-homologous receiver domain AP3564_14915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AP3564_14915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_14915 SM01049 AP3564_14915 AP3564_14925 SM00052 Putative diguanylate phosphodiesterase AP3564_14930 SM00530 Helix-turn-helix XRE-family like proteins AP3564_14940 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AP3564_14980 SM00448 cheY-homologous receiver domain AP3564_14980 SM00862 Transcriptional regulatory protein, C terminal AP3564_14985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_14985 SM00387 Histidine kinase-like ATPases AP3564_14985 SM00388 His Kinase A (phosphoacceptor) domain AP3564_15025 SM00382 ATPases associated with a variety of cellular activities AP3564_15055 SM00487 DEAD-like helicases superfamily AP3564_15055 SM00490 helicase superfamily c-terminal domain AP3564_15065 SM00822 AP3564_15065 AP3564_15185 SM00267 diguanylate cyclase AP3564_15185 SM00448 cheY-homologous receiver domain AP3564_15190 SM00260 Two component signalling adaptor domain AP3564_15190 SM00448 cheY-homologous receiver domain AP3564_15360 SM00345 helix_turn_helix gluconate operon transcriptional repressor AP3564_15360 SM00866 AP3564_15360 AP3564_15415 SM00487 DEAD-like helicases superfamily AP3564_15415 SM00490 helicase superfamily c-terminal domain AP3564_15430 SM00910 AP3564_15430 AP3564_15480 SM00382 ATPases associated with a variety of cellular activities AP3564_15540 SM00354 helix_turn _helix lactose operon repressor AP3564_15575 SM00382 ATPases associated with a variety of cellular activities AP3564_15585 SM00448 cheY-homologous receiver domain AP3564_15590 SM00091 PAS domain AP3564_15590 SM00387 Histidine kinase-like ATPases AP3564_15620 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AP3564_15630 SM00878 Biotin carboxylase C-terminal domain AP3564_15650 SM00346 helix_turn_helix isocitrate lyase regulation AP3564_15655 SM00346 helix_turn_helix isocitrate lyase regulation AP3564_15765 SM01230 AP3564_15765 AP3564_15770 SM00422 helix_turn_helix, mercury resistance AP3564_15785 SM00382 ATPases associated with a variety of cellular activities AP3564_15800 SM00853 MutL C terminal dimerisation domain AP3564_15800 SM01340 AP3564_15800 AP3564_15805 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AP3564_15805 SM00534 ATPase domain of DNA mismatch repair MUTS family AP3564_15820 SM00729 Elongator protein 3, MiaB family, Radical SAM AP3564_15845 SM00322 K homology RNA-binding domain AP3564_15845 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AP3564_15850 SM00382 ATPases associated with a variety of cellular activities AP3564_15855 SM00852 Probable molybdopterin binding domain AP3564_15905 SM00382 ATPases associated with a variety of cellular activities AP3564_15905 SM00843 AP3564_15905 AP3564_15920 SM00849 Metallo-beta-lactamase superfamily AP3564_15925 SM01130 AP3564_15925 AP3564_15935 SM00859 Semialdehyde dehydrogenase, NAD binding domain AP3564_15965 SM00316 Ribosomal protein S1-like RNA-binding domain AP3564_15965 SM00322 K homology RNA-binding domain AP3564_15970 SM01387 AP3564_15970 AP3564_15975 SM00904 Riboflavin kinase AP3564_16010 SM00316 Ribosomal protein S1-like RNA-binding domain AP3564_16010 SM00322 K homology RNA-binding domain AP3564_16020 SM00479 AP3564_16020 AP3564_16020 SM00481 DNA polymerase alpha chain like domain AP3564_16030 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AP3564_16090 SM00260 Two component signalling adaptor domain AP3564_16095 SM00073 Histidine Phosphotransfer domain AP3564_16095 SM00260 Two component signalling adaptor domain AP3564_16095 SM00387 Histidine kinase-like ATPases AP3564_16095 SM01231 AP3564_16095 AP3564_16100 SM00448 cheY-homologous receiver domain AP3564_16110 SM00382 ATPases associated with a variety of cellular activities AP3564_16110 SM00962 SRP54-type protein, GTPase domain AP3564_16145 SM00448 cheY-homologous receiver domain AP3564_16195 SM00382 ATPases associated with a variety of cellular activities AP3564_16235 SM00382 ATPases associated with a variety of cellular activities AP3564_16235 SM01086 C-terminal, D2-small domain, of ClpB protein AP3564_16255 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AP3564_16255 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AP3564_16255 SM00493 AP3564_16255 AP3564_16265 SM00881 CoA binding domain AP3564_16335 SM00382 ATPases associated with a variety of cellular activities AP3564_16335 SM00962 SRP54-type protein, GTPase domain AP3564_16335 SM00963 SRP54-type protein, helical bundle domain AP3564_16345 SM00382 ATPases associated with a variety of cellular activities AP3564_16345 SM00962 SRP54-type protein, GTPase domain AP3564_16345 SM00963 SRP54-type protein, helical bundle domain AP3564_16350 SM00968 SMC proteins Flexible Hinge Domain AP3564_16355 SM00358 Double-stranded RNA binding motif AP3564_16355 SM00535 Ribonuclease III family AP3564_16365 SM00822 AP3564_16365 AP3564_16370 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AP3564_16385 SM00487 DEAD-like helicases superfamily AP3564_16385 SM00490 helicase superfamily c-terminal domain AP3564_16390 SM01120 AP3564_16390 AP3564_16390 SM01121 AP3564_16390 AP3564_16420 SM00220 Serine/Threonine protein kinases, catalytic domain AP3564_16420 SM00740 AP3564_16420 AP3564_16425 SM00331 Sigma factor PP2C-like phosphatases AP3564_16425 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AP3564_16445 SM00487 DEAD-like helicases superfamily AP3564_16445 SM00490 helicase superfamily c-terminal domain AP3564_16455 SM01409 AP3564_16455 AP3564_16460 SM00072 Guanylate kinase homologues. AP3564_16475 SM00831 Cation transporter/ATPase, N-terminus AP3564_16525 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AP3564_16540 SM00851 MGS-like domain AP3564_16540 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AP3564_16540 SM01209 AP3564_16540 AP3564_16545 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AP3564_16570 SM00363 S4 RNA-binding domain AP3564_16595 SM00363 S4 RNA-binding domain AP3564_16640 SM00864 Tubulin/FtsZ family, GTPase domain AP3564_16640 SM00865 Tubulin/FtsZ family, C-terminal domain AP3564_16645 SM00842 Cell division protein FtsA AP3564_16700 SM00740 AP3564_16700 AP3564_16705 SM00740 AP3564_16705 AP3564_16745 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains AP3564_16770 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AP3564_16890 SM00491 AP3564_16890 AP3564_16895 SM00981 AP3564_16895 AP3564_16920 SM00487 DEAD-like helicases superfamily AP3564_16920 SM00490 helicase superfamily c-terminal domain AP3564_16960 SM00060 Fibronectin type 3 domain AP3564_16970 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AP3564_16970 SM00478 endonuclease III AP3564_16970 SM00525 AP3564_16970 AP3564_17035 SM00851 MGS-like domain AP3564_17105 SM01321 AP3564_17105 AP3564_17110 SM00914 AP3564_17110 AP3564_17115 SM00028 Tetratricopeptide repeats AP3564_17185 SM00138 Methyltransferase, chemotaxis proteins AP3564_17190 SM00562 AP3564_17190 AP3564_17220 SM00411 bacterial (prokaryotic) histone like domain AP3564_17275 SM00316 Ribosomal protein S1-like RNA-binding domain AP3564_17280 SM00563 Phosphate acyltransferases AP3564_17310 SM00870 AP3564_17310 AP3564_17320 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AP3564_17335 SM00257 Lysin motif AP3564_17345 SM00487 DEAD-like helicases superfamily AP3564_17345 SM00490 helicase superfamily c-terminal domain AP3564_17390 SM00091 PAS domain AP3564_17390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_17390 SM00387 Histidine kinase-like ATPases AP3564_17390 SM00388 His Kinase A (phosphoacceptor) domain AP3564_17395 SM00448 cheY-homologous receiver domain AP3564_17395 SM00862 Transcriptional regulatory protein, C terminal AP3564_17415 SM00363 S4 RNA-binding domain AP3564_17520 SM00387 Histidine kinase-like ATPases AP3564_17530 SM00936 Penicillin-binding protein 5, C-terminal domain AP3564_17535 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AP3564_17650 SM00849 Metallo-beta-lactamase superfamily AP3564_17720 SM00382 ATPases associated with a variety of cellular activities AP3564_17735 SM01350 AP3564_17735 AP3564_17780 SM00861 Transketolase, pyrimidine binding domain AP3564_17800 SM00448 cheY-homologous receiver domain AP3564_17805 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AP3564_17820 SM00363 S4 RNA-binding domain AP3564_17825 SM00861 Transketolase, pyrimidine binding domain AP3564_17865 SM00878 Biotin carboxylase C-terminal domain AP3564_17910 SM00382 ATPases associated with a variety of cellular activities AP3564_17915 SM00841 Elongation factor P, C-terminal AP3564_17915 SM01185 AP3564_17915 AP3564_18015 SM00450 Rhodanese Homology Domain AP3564_18035 SM00487 DEAD-like helicases superfamily AP3564_18035 SM00490 helicase superfamily c-terminal domain AP3564_18080 SM00382 ATPases associated with a variety of cellular activities AP3564_18100 SM00849 Metallo-beta-lactamase superfamily AP3564_18115 SM00631 AP3564_18115 AP3564_18135 SM00028 Tetratricopeptide repeats AP3564_18170 SM00382 ATPases associated with a variety of cellular activities AP3564_18220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AP3564_18220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_18260 SM00382 ATPases associated with a variety of cellular activities AP3564_18275 SM00518 AP endonuclease family 2 AP3564_18280 SM00487 DEAD-like helicases superfamily AP3564_18280 SM00490 helicase superfamily c-terminal domain AP3564_18315 SM00400 zinc finger AP3564_18315 SM00493 AP3564_18315 AP3564_18330 SM00116 Domain in cystathionine beta-synthase and other proteins. AP3564_18330 SM00420 helix_turn_helix, Deoxyribose operon repressor AP3564_18375 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AP3564_18440 SM01133 AP3564_18440 AP3564_18445 SM00729 Elongator protein 3, MiaB family, Radical SAM AP3564_18460 SM00271 DnaJ molecular chaperone homology domain AP3564_18480 SM00729 Elongator protein 3, MiaB family, Radical SAM AP3564_18485 SM00838 Elongation factor G C-terminus AP3564_18520 SM00849 Metallo-beta-lactamase superfamily AP3564_18530 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AP3564_18550 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AP3564_18560 SM01103 AP3564_18560 AP3564_18640 SM00732 Likely ribonuclease with RNase H fold. AP3564_18650 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AP3564_18665 SM00382 ATPases associated with a variety of cellular activities AP3564_18670 SM00028 Tetratricopeptide repeats AP3564_18690 SM00382 ATPases associated with a variety of cellular activities AP3564_18715 SM00287 Bacterial SH3 domain homologues AP3564_18715 SM00646 AP3564_18715 AP3564_18725 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AP3564_18725 SM00954 Region found in RelA / SpoT proteins AP3564_18760 SM01323 AP3564_18760 AP3564_18780 SM00382 ATPases associated with a variety of cellular activities AP3564_18785 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AP3564_18815 SM00257 Lysin motif AP3564_18865 SM01317 AP3564_18865 AP3564_18885 SM00316 Ribosomal protein S1-like RNA-binding domain AP3564_18975 SM00257 Lysin motif AP3564_18985 SM01004 Delta-aminolevulinic acid dehydratase AP3564_19020 SM00382 ATPases associated with a variety of cellular activities AP3564_19020 SM00464 Found in ATP-dependent protease La (LON) AP3564_19025 SM00382 ATPases associated with a variety of cellular activities AP3564_19035 SM00382 ATPases associated with a variety of cellular activities AP3564_19035 SM00994 ClpX C4-type zinc finger AP3564_19035 SM01086 C-terminal, D2-small domain, of ClpB protein AP3564_19060 SM01329 AP3564_19060 AP3564_19065 SM00917 LeuA allosteric (dimerisation) domain AP3564_19110 SM00909 Sporulation and spore germination AP3564_19120 SM00347 helix_turn_helix multiple antibiotic resistance protein AP3564_19125 SM00421 helix_turn_helix, Lux Regulon AP3564_19150 SM00465 GIY-YIG type nucleases (URI domain) AP3564_19160 SM00893 Electron transfer flavoprotein domain AP3564_19165 SM00893 Electron transfer flavoprotein domain AP3564_19185 SM00463 Small MutS-related domain AP3564_19185 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AP3564_19185 SM00534 ATPase domain of DNA mismatch repair MUTS family AP3564_19215 SM00873 B3/4 domain AP3564_19215 SM00874 tRNA synthetase B5 domain AP3564_19215 SM00896 Ferredoxin-fold anticodon binding domain AP3564_19230 SM00967 RNA 2'-O ribose methyltransferase substrate binding AP3564_19285 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AP3564_19295 SM00382 ATPases associated with a variety of cellular activities AP3564_19315 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AP3564_19330 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AP3564_19330 SM01232 AP3564_19330 AP3564_19335 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AP3564_19335 SM00474 3'-5' exonuclease AP3564_19335 SM00475 5'-3' exonuclease AP3564_19335 SM00482 DNA polymerase A domain AP3564_19340 SM00244 prohibitin homologues AP3564_19345 SM00244 prohibitin homologues AP3564_19350 SM00091 PAS domain AP3564_19350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AP3564_19350 SM00387 Histidine kinase-like ATPases AP3564_19350 SM00388 His Kinase A (phosphoacceptor) domain AP3564_19355 SM00448 cheY-homologous receiver domain AP3564_19355 SM00862 Transcriptional regulatory protein, C terminal AP3564_19365 SM01329 AP3564_19365 AP3564_19400 SM00919 Malic enzyme, NAD binding domain AP3564_19400 SM01274 AP3564_19400 AP3564_19405 SM00481 DNA polymerase alpha chain like domain AP3564_19430 SM00116 Domain in cystathionine beta-synthase and other proteins. AP3564_19435 SM00849 Metallo-beta-lactamase superfamily AP3564_19515 SM00981 AP3564_19515 AP3564_19555 SM00267 diguanylate cyclase AP3564_19560 SM00363 S4 RNA-binding domain AP3564_19560 SM01390 AP3564_19560 AP3564_19635 SM01133 AP3564_19635 AP3564_19640 SM00829 Enoylreductase