locus-tag class description NRE15_00005 PF00270 DEAD/DEAH box helicase NRE15_00005 PF00271 Helicase conserved C-terminal domain NRE15_00005 PF17191 RecG wedge domain NRE15_00010 PF02504 Fatty acid synthesis protein NRE15_00015 PF00550 Phosphopantetheine attachment site NRE15_00020 PF00005 ABC transporter NRE15_00020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRE15_00025 PF00005 ABC transporter NRE15_00025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRE15_00030 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_00035 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_00040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRE15_00045 PF14622 Ribonuclease-III-like NRE15_00045 PF00035 Double-stranded RNA binding motif NRE15_00050 PF06470 SMC proteins Flexible Hinge Domain NRE15_00050 PF02463 RecF/RecN/SMC N terminal domain NRE15_00060 PF00448 SRP54-type protein, GTPase domain NRE15_00060 PF02881 SRP54-type protein, helical bundle domain NRE15_00065 PF04297 Putative helix-turn-helix protein, YlxM / p13 like NRE15_00070 PF00448 SRP54-type protein, GTPase domain NRE15_00070 PF02881 SRP54-type protein, helical bundle domain NRE15_00070 PF02978 Signal peptide binding domain NRE15_00075 PF00886 Ribosomal protein S16 NRE15_00085 PF05239 PRC-barrel domain NRE15_00085 PF01782 RimM N-terminal domain NRE15_00090 PF01746 tRNA (Guanine-1)-methyltransferase NRE15_00095 PF01245 Ribosomal protein L19 NRE15_00110 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NRE15_00110 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NRE15_00120 PF01883 Iron-sulfur cluster assembly protein NRE15_00130 PF00004 ATPase family associated with various cellular activities (AAA) NRE15_00130 PF07724 AAA domain (Cdc48 subfamily) NRE15_00130 PF17871 AAA lid domain NRE15_00130 PF02861 Clp amino terminal domain, pathogenicity island component NRE15_00130 PF10431 C-terminal, D2-small domain, of ClpB protein NRE15_00135 PF00248 Aldo/keto reductase family NRE15_00145 PF00005 ABC transporter NRE15_00150 PF01207 Dihydrouridine synthase (Dus) NRE15_00165 PF12833 Helix-turn-helix domain NRE15_00175 PF02423 Ornithine cyclodeaminase/mu-crystallin family NRE15_00220 PF10576 Iron-sulfur binding domain of endonuclease III NRE15_00220 PF00633 Helix-hairpin-helix motif NRE15_00220 PF00730 HhH-GPD superfamily base excision DNA repair protein NRE15_00235 PF00005 ABC transporter NRE15_00240 PF13409 Glutathione S-transferase, N-terminal domain NRE15_00245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRE15_00250 PF01594 AI-2E family transporter NRE15_00255 PF01168 Alanine racemase, N-terminal domain NRE15_00275 PF00756 Putative esterase NRE15_00275 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase NRE15_00280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NRE15_00295 PF06081 Aromatic acid exporter family member 1 NRE15_00300 PF01475 Ferric uptake regulator family NRE15_00305 PF00579 tRNA synthetases class I (W and Y) NRE15_00310 PF03960 ArsC family NRE15_00315 PF01458 Uncharacterized protein family (UPF0051) NRE15_00320 PF01592 NifU-like N terminal domain NRE15_00325 PF00266 Aminotransferase class-V NRE15_00330 PF01458 Uncharacterized protein family (UPF0051) NRE15_00335 PF00005 ABC transporter NRE15_00340 PF05389 Negative regulator of genetic competence (MecA) NRE15_00350 PF01432 Peptidase family M3 NRE15_00350 PF08439 Oligopeptidase F NRE15_00355 PF02390 Putative methyltransferase NRE15_00360 PF01636 Phosphotransferase enzyme family NRE15_00370 PF05343 M42 glutamyl aminopeptidase NRE15_00375 PF01588 Putative tRNA binding domain NRE15_00375 PF14794 Domain of unknown function (DUF4479) NRE15_00385 PF02875 Mur ligase family, glutamate ligase domain NRE15_00385 PF08245 Mur ligase middle domain NRE15_00385 PF01225 Mur ligase family, catalytic domain NRE15_00390 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NRE15_00390 PF00476 DNA polymerase family A NRE15_00390 PF01367 5'-3' exonuclease, C-terminal SAM fold NRE15_00395 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NRE15_00395 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NRE15_00395 PF06827 Zinc finger found in FPG and IleRS NRE15_00400 PF01121 Dephospho-CoA kinase NRE15_00405 PF03477 ATP cone domain NRE15_00415 PF07319 Primosomal protein DnaI N-terminus NRE15_00415 PF01695 IstB-like ATP binding protein NRE15_00425 PF03129 Anticodon binding domain NRE15_00425 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NRE15_00425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NRE15_00425 PF02824 TGS domain NRE15_00430 PF00768 D-alanyl-D-alanine carboxypeptidase NRE15_00430 PF07943 Penicillin-binding protein 5, C-terminal domain NRE15_00440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRE15_00445 PF00707 Translation initiation factor IF-3, C-terminal domain NRE15_00445 PF05198 Translation initiation factor IF-3, N-terminal domain NRE15_00450 PF01632 Ribosomal protein L35 NRE15_00455 PF00453 Ribosomal protein L20 NRE15_00460 PF00664 ABC transporter transmembrane region NRE15_00460 PF00005 ABC transporter NRE15_00465 PF00005 ABC transporter NRE15_00465 PF00664 ABC transporter transmembrane region NRE15_00470 PF00800 Prephenate dehydratase NRE15_00470 PF01817 Chorismate mutase type II NRE15_00475 PF02153 Prephenate dehydrogenase NRE15_00490 PF04607 Region found in RelA / SpoT proteins NRE15_00495 PF01513 ATP-NAD kinase NRE15_00505 PF00849 RNA pseudouridylate synthase NRE15_00510 PF01769 Divalent cation transporter NRE15_00510 PF00571 CBS domain NRE15_00510 PF03448 MgtE intracellular N domain NRE15_00520 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRE15_00520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRE15_00530 PF00009 Elongation factor Tu GTP binding domain NRE15_00530 PF16658 Class II release factor RF3, C-terminal domain NRE15_00530 PF03144 Elongation factor Tu domain 2 NRE15_00540 PF00381 PTS HPr component phosphorylation site NRE15_00545 PF05524 PEP-utilising enzyme, N-terminal NRE15_00545 PF02896 PEP-utilising enzyme, TIM barrel domain NRE15_00545 PF00391 PEP-utilising enzyme, mobile domain NRE15_00550 PF00534 Glycosyl transferases group 1 NRE15_00550 PF13439 Glycosyltransferase Family 4 NRE15_00555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NRE15_00555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NRE15_00570 PF01926 50S ribosome-binding GTPase NRE15_00575 PF01985 CRS1 / YhbY (CRM) domain NRE15_00580 PF01467 Cytidylyltransferase-like NRE15_00585 PF01966 HD domain NRE15_00595 PF08241 Methyltransferase domain NRE15_00600 PF05636 HIGH Nucleotidyl Transferase NRE15_00610 PF01783 Ribosomal L32p protein family NRE15_00615 PF00574 Clp protease NRE15_00620 PF04198 Putative sugar-binding domain NRE15_00625 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NRE15_00625 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NRE15_00630 PF00162 Phosphoglycerate kinase NRE15_00635 PF00121 Triosephosphate isomerase NRE15_00640 PF01676 Metalloenzyme superfamily NRE15_00640 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NRE15_00645 PF03952 Enolase, N-terminal domain NRE15_00645 PF00113 Enolase, C-terminal TIM barrel domain NRE15_00660 PF03328 HpcH/HpaI aldolase/citrate lyase family NRE15_00665 PF01614 Bacterial transcriptional regulator NRE15_00665 PF09339 IclR helix-turn-helix domain NRE15_00670 PF01361 Tautomerase enzyme NRE15_00675 PF00871 Acetokinase family NRE15_00680 PF00156 Phosphoribosyl transferase domain NRE15_00695 PF16193 AAA C-terminal domain NRE15_00695 PF05496 Holliday junction DNA helicase RuvB P-loop domain NRE15_00695 PF12002 MgsA AAA+ ATPase C terminal NRE15_00700 PF00266 Aminotransferase class-V NRE15_00720 PF00575 S1 RNA binding domain NRE15_00720 PF00773 RNB domain NRE15_00720 PF17876 Cold shock domain NRE15_00720 PF08206 Ribonuclease B OB domain NRE15_00725 PF01668 SmpB protein NRE15_00750 PF07963 Prokaryotic N-terminal methylation motif NRE15_00760 PF00437 Type II/IV secretion system protein NRE15_00765 PF07288 Protein of unknown function (DUF1447) NRE15_00770 PF17770 Ribonuclease J C-terminal domain NRE15_00770 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NRE15_00770 PF00753 Metallo-beta-lactamase superfamily NRE15_00775 PF01321 Creatinase/Prolidase N-terminal domain NRE15_00775 PF00557 Metallopeptidase family M24 NRE15_00780 PF03780 Asp23 family, cell envelope-related function NRE15_00785 PF01029 NusB family NRE15_00800 PF00005 ABC transporter NRE15_00800 PF12704 MacB-like periplasmic core domain NRE15_00800 PF02687 FtsX-like permease family NRE15_00805 PF00664 ABC transporter transmembrane region NRE15_00805 PF00005 ABC transporter NRE15_00810 PF00005 ABC transporter NRE15_00810 PF00664 ABC transporter transmembrane region NRE15_00815 PF02705 K+ potassium transporter NRE15_00820 PF01256 Carbohydrate kinase NRE15_00830 PF00072 Response regulator receiver domain NRE15_00830 PF04397 LytTr DNA-binding domain NRE15_00840 PF00005 ABC transporter NRE15_00845 PF00005 ABC transporter NRE15_00845 PF00664 ABC transporter transmembrane region NRE15_00855 PF13742 OB-fold nucleic acid binding domain NRE15_00855 PF02601 Exonuclease VII, large subunit NRE15_00860 PF02609 Exonuclease VII small subunit NRE15_00865 PF00348 Polyprenyl synthetase NRE15_00870 PF01728 FtsJ-like methyltransferase NRE15_00870 PF01479 S4 domain NRE15_00875 PF13476 AAA domain NRE15_00880 PF03009 Glycerophosphoryl diester phosphodiesterase family NRE15_00890 PF01926 50S ribosome-binding GTPase NRE15_00890 PF16360 GTP-binding GTPase Middle Region NRE15_00890 PF13167 GTP-binding GTPase N-terminal NRE15_00895 PF01327 Polypeptide deformylase NRE15_00905 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NRE15_00905 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NRE15_00915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NRE15_00915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NRE15_00920 PF00550 Phosphopantetheine attachment site NRE15_00925 PF03060 Nitronate monooxygenase NRE15_00930 PF00698 Acyl transferase domain NRE15_00940 PF00109 Beta-ketoacyl synthase, N-terminal domain NRE15_00940 PF02801 Beta-ketoacyl synthase, C-terminal domain NRE15_00945 PF00364 Biotin-requiring enzyme NRE15_00950 PF07977 FabA-like domain NRE15_00955 PF00289 Biotin carboxylase, N-terminal domain NRE15_00955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NRE15_00955 PF02785 Biotin carboxylase C-terminal domain NRE15_00960 PF01039 Carboxyl transferase domain NRE15_00965 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NRE15_00970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRE15_00975 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_00980 PF12911 N-terminal TM domain of oligopeptide transport permease C NRE15_00980 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_00985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRE15_00985 PF00005 ABC transporter NRE15_00990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRE15_00990 PF00005 ABC transporter NRE15_00995 PF00676 Dehydrogenase E1 component NRE15_01000 PF02779 Transketolase, pyrimidine binding domain NRE15_01000 PF02780 Transketolase, C-terminal domain NRE15_01005 PF02817 e3 binding domain NRE15_01005 PF00364 Biotin-requiring enzyme NRE15_01005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NRE15_01010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRE15_01010 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRE15_01020 PF05256 Uncharacterised protein family (UPF0223) NRE15_01025 PF00459 Inositol monophosphatase family NRE15_01030 PF03144 Elongation factor Tu domain 2 NRE15_01030 PF00009 Elongation factor Tu GTP binding domain NRE15_01030 PF14492 Elongation Factor G, domain II NRE15_01030 PF00679 Elongation factor G C-terminus NRE15_01035 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NRE15_01035 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NRE15_01040 PF01098 Cell cycle protein NRE15_01045 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) NRE15_01055 PF01467 Cytidylyltransferase-like NRE15_01060 PF00005 ABC transporter NRE15_01060 PF16326 ABC transporter C-terminal domain NRE15_01060 PF12848 ABC transporter NRE15_01065 PF16921 Tex protein YqgF-like domain NRE15_01065 PF09371 Tex-like protein N-terminal domain NRE15_01065 PF17674 HHH domain NRE15_01065 PF00575 S1 RNA binding domain NRE15_01070 PF13567 Domain of unknown function (DUF4131) NRE15_01070 PF03772 Competence protein NRE15_01070 PF00753 Metallo-beta-lactamase superfamily NRE15_01085 PF00107 Zinc-binding dehydrogenase NRE15_01085 PF08240 Alcohol dehydrogenase GroES-like domain NRE15_01090 PF01501 Glycosyl transferase family 8 NRE15_01090 PF08437 Glycosyl transferase family 8 C-terminal NRE15_01095 PF01047 MarR family NRE15_01100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRE15_01105 PF01613 Flavin reductase like domain NRE15_01115 PF01522 Polysaccharide deacetylase NRE15_01115 PF03422 Carbohydrate binding module (family 6) NRE15_01115 PF00457 Glycosyl hydrolases family 11 NRE15_01120 PF13458 Periplasmic binding protein NRE15_01130 PF12697 Alpha/beta hydrolase family NRE15_01135 PF02645 Uncharacterised protein, DegV family COG1307 NRE15_01145 PF02872 5'-nucleotidase, C-terminal domain NRE15_01150 PF06265 Protein of unknown function (DUF1027) NRE15_01155 PF13344 Haloacid dehalogenase-like hydrolase NRE15_01165 PF04608 Phosphatidylglycerophosphatase A NRE15_01170 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRE15_01175 PF02681 Divergent PAP2 family NRE15_01180 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NRE15_01185 PF00013 KH domain NRE15_01185 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NRE15_01185 PF01138 3' exoribonuclease family, domain 1 NRE15_01185 PF03725 3' exoribonuclease family, domain 2 NRE15_01185 PF00575 S1 RNA binding domain NRE15_01190 PF00342 Phosphoglucose isomerase NRE15_01315 PF11799 impB/mucB/samB family C-terminal domain NRE15_01315 PF11798 IMS family HHH motif NRE15_01315 PF00817 impB/mucB/samB family NRE15_01325 PF00912 Transglycosylase NRE15_01325 PF00905 Penicillin binding protein transpeptidase domain NRE15_01330 PF17773 UPF0176 acylphosphatase like domain NRE15_01330 PF12368 Rhodanase C-terminal NRE15_01330 PF00581 Rhodanese-like domain NRE15_01335 PF00781 Diacylglycerol kinase catalytic domain NRE15_01350 PF13456 Reverse transcriptase-like NRE15_01355 PF01170 Putative RNA methylase family UPF0020 NRE15_01355 PF02926 THUMP domain NRE15_01365 PF05103 DivIVA protein NRE15_01380 PF04452 RNA methyltransferase NRE15_01385 PF01791 DeoC/LacD family aldolase NRE15_01390 PF02824 TGS domain NRE15_01390 PF13291 ACT domain NRE15_01390 PF04607 Region found in RelA / SpoT proteins NRE15_01395 PF02580 D-Tyr-tRNA(Tyr) deacylase NRE15_01400 PF01520 N-acetylmuramoyl-L-alanine amidase NRE15_01400 PF08239 Bacterial SH3 domain NRE15_01405 PF13393 Histidyl-tRNA synthetase NRE15_01405 PF03129 Anticodon binding domain NRE15_01410 PF02938 GAD domain NRE15_01410 PF00152 tRNA synthetases class II (D, K and N) NRE15_01410 PF01336 OB-fold nucleic acid binding domain NRE15_01415 PF01261 Xylose isomerase-like TIM barrel NRE15_01420 PF01979 Amidohydrolase family NRE15_01425 PF00929 Exonuclease NRE15_01425 PF07733 Bacterial DNA polymerase III alpha NTPase domain NRE15_01425 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NRE15_01425 PF14579 Helix-hairpin-helix motif NRE15_01425 PF02811 PHP domain NRE15_01425 PF14480 DNA polymerase III polC-type N-terminus I NRE15_01425 PF11490 DNA polymerase III polC-type N-terminus II NRE15_01425 PF01336 OB-fold nucleic acid binding domain NRE15_01430 PF00155 Aminotransferase class I and II NRE15_01435 PF01370 NAD dependent epimerase/dehydratase family NRE15_01465 PF00005 ABC transporter NRE15_01470 PF02347 Glycine cleavage system P-protein NRE15_01475 PF02347 Glycine cleavage system P-protein NRE15_01480 PF01597 Glycine cleavage H-protein NRE15_01485 PF08669 Glycine cleavage T-protein C-terminal barrel domain NRE15_01485 PF01571 Aminomethyltransferase folate-binding domain NRE15_01490 PF03618 Kinase/pyrophosphorylase NRE15_01495 PF01475 Ferric uptake regulator family NRE15_01500 PF01165 Ribosomal protein S21 NRE15_01505 PF09424 Yqey-like protein NRE15_01510 PF02562 PhoH-like protein NRE15_01515 PF07698 7TM receptor with intracellular HD hydrolase NRE15_01515 PF07697 7TM-HD extracellular NRE15_01515 PF01966 HD domain NRE15_01520 PF02130 Uncharacterized protein family UPF0054 NRE15_01525 PF01219 Prokaryotic diacylglycerol kinase NRE15_01530 PF07650 KH domain NRE15_01530 PF01926 50S ribosome-binding GTPase NRE15_01535 PF02565 Recombination protein O C terminal NRE15_01535 PF11967 Recombination protein O N terminal NRE15_01545 PF03109 ABC1 family NRE15_01555 PF00005 ABC transporter NRE15_01555 PF13732 Domain of unknown function (DUF4162) NRE15_01565 PF01177 Asp/Glu/Hydantoin racemase NRE15_01570 PF01725 Ham1 family NRE15_01595 PF00005 ABC transporter NRE15_01610 PF00924 Mechanosensitive ion channel NRE15_01620 PF12732 YtxH-like protein NRE15_01625 PF00356 Bacterial regulatory proteins, lacI family NRE15_01640 PF00364 Biotin-requiring enzyme NRE15_01645 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NRE15_01655 PF02436 Conserved carboxylase domain NRE15_01655 PF00682 HMGL-like NRE15_01655 PF00364 Biotin-requiring enzyme NRE15_01665 PF02772 S-adenosylmethionine synthetase, central domain NRE15_01665 PF02773 S-adenosylmethionine synthetase, C-terminal domain NRE15_01665 PF00438 S-adenosylmethionine synthetase, N-terminal domain NRE15_01670 PF06962 Putative rRNA methylase NRE15_01675 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NRE15_01675 PF01476 LysM domain NRE15_01680 PF08264 Anticodon-binding domain of tRNA NRE15_01680 PF00133 tRNA synthetases class I (I, L, M and V) NRE15_01680 PF13603 Leucyl-tRNA synthetase, Domain 2 NRE15_01680 PF09334 tRNA synthetases class I (M) NRE15_01685 PF14667 Polysaccharide biosynthesis C-terminal domain NRE15_01685 PF01943 Polysaccharide biosynthesis protein NRE15_01690 PF00849 RNA pseudouridylate synthase NRE15_01690 PF01479 S4 domain NRE15_01695 PF01546 Peptidase family M20/M25/M40 NRE15_01700 PF00588 SpoU rRNA Methylase family NRE15_01700 PF08032 RNA 2'-O ribose methyltransferase substrate binding NRE15_01710 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NRE15_01710 PF01409 tRNA synthetases class II core domain (F) NRE15_01715 PF01588 Putative tRNA binding domain NRE15_01715 PF03483 B3/4 domain NRE15_01715 PF03484 tRNA synthetase B5 domain NRE15_01715 PF03147 Ferredoxin-fold anticodon binding domain NRE15_01715 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NRE15_01725 PF01628 HrcA protein C terminal domain NRE15_01725 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding NRE15_01730 PF01025 GrpE NRE15_01735 PF00012 Hsp70 protein NRE15_01740 PF00226 DnaJ domain NRE15_01740 PF00684 DnaJ central domain NRE15_01740 PF01556 DnaJ C terminal domain NRE15_01745 PF08280 M protein trans-acting positive regulator (MGA) HTH domain NRE15_01745 PF08270 M protein trans-acting positive regulator (MGA) PRD domain NRE15_01745 PF05043 Mga helix-turn-helix domain NRE15_01765 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NRE15_01765 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NRE15_01770 PF00679 Elongation factor G C-terminus NRE15_01770 PF00009 Elongation factor Tu GTP binding domain NRE15_01770 PF03144 Elongation factor Tu domain 2 NRE15_01770 PF06421 GTP-binding protein LepA C-terminus NRE15_01775 PF03167 Uracil DNA glycosylase superfamily NRE15_01785 PF00005 ABC transporter NRE15_01785 PF16326 ABC transporter C-terminal domain NRE15_01785 PF12848 ABC transporter NRE15_01790 PF00303 Thymidylate synthase NRE15_01795 PF00186 Dihydrofolate reductase NRE15_01805 PF00294 pfkB family carbohydrate kinase NRE15_01810 PF00664 ABC transporter transmembrane region NRE15_01810 PF00005 ABC transporter NRE15_01815 PF00005 ABC transporter NRE15_01815 PF00664 ABC transporter transmembrane region NRE15_01825 PF12833 Helix-turn-helix domain NRE15_01825 PF02311 AraC-like ligand binding domain NRE15_01830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NRE15_01830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRE15_01860 PF00005 ABC transporter NRE15_01865 PF00005 ABC transporter NRE15_01865 PF02687 FtsX-like permease family NRE15_01865 PF12704 MacB-like periplasmic core domain NRE15_01870 PF03006 Haemolysin-III related NRE15_01880 PF06855 YozE SAM-like fold NRE15_01885 PF01048 Phosphorylase superfamily NRE15_01890 PF17820 PDZ domain NRE15_01890 PF03572 Peptidase family S41 NRE15_01890 PF01471 Putative peptidoglycan binding domain NRE15_01895 PF10502 Signal peptidase, peptidase S26 NRE15_01900 PF01926 50S ribosome-binding GTPase NRE15_01905 PF01351 Ribonuclease HII NRE15_01910 PF02481 DNA recombination-mediator protein A NRE15_01915 PF01131 DNA topoisomerase NRE15_01915 PF01751 Toprim domain NRE15_01915 PF01396 Topoisomerase DNA binding C4 zinc finger NRE15_01920 PF02899 Phage integrase, N-terminal SAM-like domain NRE15_01920 PF00589 Phage integrase family NRE15_01925 PF00227 Proteasome subunit NRE15_01930 PF07724 AAA domain (Cdc48 subfamily) NRE15_01930 PF10431 C-terminal, D2-small domain, of ClpB protein NRE15_01930 PF00004 ATPase family associated with various cellular activities (AAA) NRE15_01935 PF01263 Aldose 1-epimerase NRE15_01940 PF02660 Glycerol-3-phosphate acyltransferase NRE15_01945 PF00204 DNA gyrase B NRE15_01945 PF00986 DNA gyrase B subunit, carboxyl terminus NRE15_01945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_01945 PF01751 Toprim domain NRE15_01950 PF00521 DNA gyrase/topoisomerase IV, subunit A NRE15_01950 PF03989 DNA gyrase C-terminal domain, beta-propeller NRE15_01955 PF01228 Glycine radical NRE15_01955 PF02901 Pyruvate formate lyase-like NRE15_01960 PF04055 Radical SAM superfamily NRE15_01975 PF02833 DHHA2 domain NRE15_01975 PF01368 DHH family NRE15_01980 PF05670 NFACT protein RNA binding domain NRE15_01990 PF02653 Branched-chain amino acid transport system / permease component NRE15_01995 PF00005 ABC transporter NRE15_02005 PF00072 Response regulator receiver domain NRE15_02005 PF07494 Two component regulator propeller NRE15_02005 PF07495 Y_Y_Y domain NRE15_02005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_02005 PF12833 Helix-turn-helix domain NRE15_02005 PF00512 His Kinase A (phospho-acceptor) domain NRE15_02010 PF09587 Bacterial capsule synthesis protein PGA_cap NRE15_02035 PF01263 Aldose 1-epimerase NRE15_02040 PF10509 Galactokinase galactose-binding signature NRE15_02040 PF08544 GHMP kinases C terminal NRE15_02040 PF00288 GHMP kinases N terminal domain NRE15_02045 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NRE15_02045 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NRE15_02060 PF00465 Iron-containing alcohol dehydrogenase NRE15_02060 PF00171 Aldehyde dehydrogenase family NRE15_02065 PF00149 Calcineurin-like phosphoesterase NRE15_02080 PF00005 ABC transporter NRE15_02105 PF00484 Carbonic anhydrase NRE15_02110 PF00583 Acetyltransferase (GNAT) family NRE15_02115 PF07995 Glucose / Sorbosone dehydrogenase NRE15_02125 PF00005 ABC transporter NRE15_02125 PF08402 TOBE domain NRE15_02140 PF01695 IstB-like ATP binding protein NRE15_02155 PF00005 ABC transporter NRE15_02165 PF01235 Sodium:alanine symporter family NRE15_02170 PF00005 ABC transporter NRE15_02175 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_02195 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NRE15_02200 PF05569 BlaR1 peptidase M56 NRE15_02200 PF00905 Penicillin binding protein transpeptidase domain NRE15_02210 PF00582 Universal stress protein family NRE15_02215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRE15_02215 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRE15_02220 PF01206 Sulfurtransferase TusA NRE15_02220 PF00581 Rhodanese-like domain NRE15_02225 PF02583 Metal-sensitive transcriptional repressor NRE15_02235 PF01297 Zinc-uptake complex component A periplasmic NRE15_02240 PF00005 ABC transporter NRE15_02245 PF00950 ABC 3 transport family NRE15_02250 PF00950 ABC 3 transport family NRE15_02265 PF03180 NLPA lipoprotein NRE15_02270 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_02275 PF09383 NIL domain NRE15_02275 PF00005 ABC transporter NRE15_02290 PF08000 Bacterial PH domain NRE15_02310 PF00690 Cation transporter/ATPase, N-terminus NRE15_02310 PF00689 Cation transporting ATPase, C-terminus NRE15_02345 PF02586 SOS response associated peptidase (SRAP) NRE15_02350 PF02887 Pyruvate kinase, alpha/beta domain NRE15_02350 PF00224 Pyruvate kinase, barrel domain NRE15_02355 PF10397 Adenylosuccinate lyase C-terminus NRE15_02355 PF00206 Lyase NRE15_02365 PF00849 RNA pseudouridylate synthase NRE15_02365 PF01479 S4 domain NRE15_02370 PF01252 Signal peptidase (SPase) II NRE15_02385 PF12705 PD-(D/E)XK nuclease superfamily NRE15_02385 PF00580 UvrD/REP helicase N-terminal domain NRE15_02385 PF13361 UvrD-like helicase C-terminal domain NRE15_02390 PF12705 PD-(D/E)XK nuclease superfamily NRE15_02395 PF07687 Peptidase dimerisation domain NRE15_02395 PF01546 Peptidase family M20/M25/M40 NRE15_02400 PF01784 NIF3 (NGG1p interacting factor 3) NRE15_02405 PF04816 tRNA (adenine(22)-N(1))-methyltransferase NRE15_02410 PF03979 Sigma-70 factor, region 1.1 NRE15_02410 PF00140 Sigma-70 factor, region 1.2 NRE15_02410 PF04542 Sigma-70 region 2 NRE15_02410 PF04539 Sigma-70 region 3 NRE15_02410 PF04545 Sigma-70, region 4 NRE15_02415 PF10410 DnaB-helicase binding domain of primase NRE15_02415 PF08275 DNA primase catalytic core, N-terminal domain NRE15_02415 PF01807 CHC2 zinc finger NRE15_02420 PF11700 Vacuole effluxer Atg22 like NRE15_02425 PF01926 50S ribosome-binding GTPase NRE15_02430 PF06689 ClpX C4-type zinc finger NRE15_02430 PF10431 C-terminal, D2-small domain, of ClpB protein NRE15_02430 PF07724 AAA domain (Cdc48 subfamily) NRE15_02435 PF05698 Bacterial trigger factor protein (TF) C-terminus NRE15_02435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRE15_02435 PF05697 Bacterial trigger factor protein (TF) NRE15_02440 PF03838 Recombination protein U NRE15_02445 PF00905 Penicillin binding protein transpeptidase domain NRE15_02445 PF00912 Transglycosylase NRE15_02450 PF07261 Replication initiation and membrane attachment NRE15_02455 PF00152 tRNA synthetases class II (D, K and N) NRE15_02455 PF01336 OB-fold nucleic acid binding domain NRE15_02465 PF13307 Helicase C-terminal domain NRE15_02465 PF04851 Type III restriction enzyme, res subunit NRE15_02465 PF00929 Exonuclease NRE15_02470 PF01743 Poly A polymerase head domain NRE15_02470 PF12627 Probable RNA and SrmB- binding site of polymerase A NRE15_02470 PF13735 tRNA nucleotidyltransferase domain 2 putative NRE15_02490 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NRE15_02495 PF00216 Bacterial DNA-binding protein NRE15_02500 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NRE15_02500 PF01926 50S ribosome-binding GTPase NRE15_02505 PF00575 S1 RNA binding domain NRE15_02510 PF02224 Cytidylate kinase NRE15_02515 PF05257 CHAP domain NRE15_02515 PF01476 LysM domain NRE15_02525 PF12822 ECF transporter, substrate-specific component NRE15_02530 PF00849 RNA pseudouridylate synthase NRE15_02530 PF01479 S4 domain NRE15_02535 PF04079 Segregation and condensation complex subunit ScpB NRE15_02540 PF02616 Segregation and condensation protein ScpA NRE15_02550 PF01048 Phosphorylase superfamily NRE15_02555 PF01676 Metalloenzyme superfamily NRE15_02560 PF02899 Phage integrase, N-terminal SAM-like domain NRE15_02560 PF00589 Phage integrase family NRE15_02570 PF03485 Arginyl tRNA synthetase N terminal domain NRE15_02570 PF05746 DALR anticodon binding domain NRE15_02570 PF00750 tRNA synthetases class I (R) NRE15_02575 PF00391 PEP-utilising enzyme, mobile domain NRE15_02575 PF00224 Pyruvate kinase, barrel domain NRE15_02575 PF02887 Pyruvate kinase, alpha/beta domain NRE15_02580 PF00365 Phosphofructokinase NRE15_02585 PF07733 Bacterial DNA polymerase III alpha NTPase domain NRE15_02585 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NRE15_02585 PF14579 Helix-hairpin-helix motif NRE15_02585 PF02811 PHP domain NRE15_02585 PF01336 OB-fold nucleic acid binding domain NRE15_02595 PF02547 Queuosine biosynthesis protein NRE15_02600 PF05496 Holliday junction DNA helicase RuvB P-loop domain NRE15_02600 PF05491 RuvB C-terminal winged helix domain NRE15_02600 PF17864 RuvB AAA lid domain NRE15_02605 PF07499 RuvA, C-terminal domain NRE15_02605 PF01330 RuvA N terminal domain NRE15_02610 PF01641 SelR domain NRE15_02615 PF01119 DNA mismatch repair protein, C-terminal domain NRE15_02615 PF08676 MutL C terminal dimerisation domain NRE15_02620 PF01624 MutS domain I NRE15_02620 PF05192 MutS domain III NRE15_02620 PF05190 MutS family domain IV NRE15_02620 PF00488 MutS domain V NRE15_02620 PF05188 MutS domain II NRE15_02625 PF13277 YmdB-like protein NRE15_02630 PF01966 HD domain NRE15_02630 PF00013 KH domain NRE15_02630 PF12072 Domain of unknown function (DUF3552) NRE15_02635 PF00154 recA bacterial DNA recombination protein NRE15_02640 PF02464 Competence-damaged protein NRE15_02640 PF18146 Damage-inducible protein CinA KH domain NRE15_02640 PF00994 Probable molybdopterin binding domain NRE15_02645 PF01066 CDP-alcohol phosphatidyltransferase NRE15_02650 PF13464 Domain of unknown function (DUF4115) NRE15_02655 PF02653 Branched-chain amino acid transport system / permease component NRE15_02660 PF02653 Branched-chain amino acid transport system / permease component NRE15_02665 PF00005 ABC transporter NRE15_02670 PF02608 ABC transporter substrate-binding protein PnrA-like NRE15_02675 PF09397 Ftsk gamma domain NRE15_02675 PF01580 FtsK/SpoIIIE family NRE15_02675 PF17854 FtsK alpha domain NRE15_02680 PF00708 Acylphosphatase NRE15_02685 PF02096 60Kd inner membrane protein NRE15_02690 PF18719 ArlS sensor domain NRE15_02690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_02690 PF00512 His Kinase A (phospho-acceptor) domain NRE15_02695 PF00072 Response regulator receiver domain NRE15_02695 PF00486 Transcriptional regulatory protein, C terminal NRE15_02705 PF00581 Rhodanese-like domain NRE15_02710 PF00480 ROK family NRE15_02720 PF00471 Ribosomal protein L33 NRE15_02735 PF00334 Nucleoside diphosphate kinase NRE15_02740 PF00905 Penicillin binding protein transpeptidase domain NRE15_02740 PF03717 Penicillin-binding Protein dimerisation domain NRE15_02755 PF00271 Helicase conserved C-terminal domain NRE15_02755 PF00270 DEAD/DEAH box helicase NRE15_02760 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NRE15_02760 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NRE15_02765 PF02272 DHHA1 domain NRE15_02765 PF01368 DHH family NRE15_02770 PF03061 Thioesterase superfamily NRE15_02770 PF00571 CBS domain NRE15_02770 PF07085 DRTGG domain NRE15_02770 PF00392 Bacterial regulatory proteins, gntR family NRE15_02780 PF02535 ZIP Zinc transporter NRE15_02785 PF00817 impB/mucB/samB family NRE15_02785 PF11799 impB/mucB/samB family C-terminal domain NRE15_02785 PF11798 IMS family HHH motif NRE15_02790 PF02699 Preprotein translocase subunit NRE15_02795 PF01702 Queuine tRNA-ribosyltransferase NRE15_02810 PF00664 ABC transporter transmembrane region NRE15_02810 PF00005 ABC transporter NRE15_02815 PF00005 ABC transporter NRE15_02815 PF00664 ABC transporter transmembrane region NRE15_02820 PF03672 Uncharacterised protein family (UPF0154) NRE15_02825 PF05979 Bacterial protein of unknown function (DUF896) NRE15_02830 PF01726 LexA DNA binding domain NRE15_02830 PF00717 Peptidase S24-like NRE15_02835 PF00156 Phosphoribosyl transferase domain NRE15_02840 PF01368 DHH family NRE15_02840 PF02272 DHHA1 domain NRE15_02840 PF17768 RecJ OB domain NRE15_02840 PF10141 Single-strand DNA-specific exonuclease, C terminal domain NRE15_02850 PF00106 short chain dehydrogenase NRE15_02855 PF00753 Metallo-beta-lactamase superfamily NRE15_02860 PF01757 Acyltransferase family NRE15_02865 PF01018 GTP1/OBG NRE15_02865 PF01926 50S ribosome-binding GTPase NRE15_02865 PF09269 Domain of unknown function (DUF1967) NRE15_02870 PF02092 Glycyl-tRNA synthetase beta subunit NRE15_02875 PF02091 Glycyl-tRNA synthetase alpha subunit NRE15_02885 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NRE15_02885 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NRE15_02890 PF00085 Thioredoxin NRE15_02895 PF00488 MutS domain V NRE15_02895 PF01713 Smr domain NRE15_02905 PF05164 Cell division protein ZapA NRE15_02910 PF11858 Domain of unknown function (DUF3378) NRE15_02910 PF01351 Ribonuclease HII NRE15_02915 PF01522 Polysaccharide deacetylase NRE15_02915 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain NRE15_02920 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NRE15_02920 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NRE15_02925 PF06969 HemN C-terminal domain NRE15_02925 PF04055 Radical SAM superfamily NRE15_02930 PF06574 FAD synthetase NRE15_02930 PF01687 Riboflavin kinase NRE15_02935 PF16198 tRNA pseudouridylate synthase B C-terminal domain NRE15_02935 PF01509 TruB family pseudouridylate synthase (N terminal domain) NRE15_02950 PF02033 Ribosome-binding factor A NRE15_02955 PF04760 Translation initiation factor IF-2, N-terminal region NRE15_02955 PF00009 Elongation factor Tu GTP binding domain NRE15_02955 PF04760 Translation initiation factor IF-2, N-terminal region NRE15_02955 PF00009 Elongation factor Tu GTP binding domain NRE15_02955 PF11987 Translation-initiation factor 2 NRE15_02955 PF11987 Translation-initiation factor 2 NRE15_02960 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family NRE15_02965 PF04296 Protein of unknown function (DUF448) NRE15_02970 PF13184 NusA-like KH domain NRE15_02970 PF08529 NusA N-terminal domain NRE15_02970 PF00575 S1 RNA binding domain NRE15_02975 PF02576 RimP N-terminal domain NRE15_02975 PF17384 RimP C-terminal SH3 domain NRE15_02980 PF13627 Prokaryotic lipoprotein-attachment site NRE15_02980 PF00080 Copper/zinc superoxide dismutase (SODC) NRE15_02985 PF03358 NADPH-dependent FMN reductase NRE15_02990 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_02995 PF00005 ABC transporter NRE15_03000 PF01522 Polysaccharide deacetylase NRE15_03005 PF11490 DNA polymerase III polC-type N-terminus II NRE15_03005 PF14480 DNA polymerase III polC-type N-terminus I NRE15_03005 PF00929 Exonuclease NRE15_03005 PF02811 PHP domain NRE15_03005 PF01336 OB-fold nucleic acid binding domain NRE15_03005 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NRE15_03005 PF07733 Bacterial DNA polymerase III alpha NTPase domain NRE15_03005 PF14579 Helix-hairpin-helix motif NRE15_03010 PF17820 PDZ domain NRE15_03010 PF02163 Peptidase family M50 NRE15_03020 PF01255 Putative undecaprenyl diphosphate synthase NRE15_03025 PF01765 Ribosome recycling factor NRE15_03035 PF02146 Sir2 family NRE15_03040 PF00696 Amino acid kinase family NRE15_03045 PF00889 Elongation factor TS NRE15_03050 PF00318 Ribosomal protein S2 NRE15_03055 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NRE15_03055 PF01266 FAD dependent oxidoreductase NRE15_03060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NRE15_03060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NRE15_03075 PF12127 SigmaW regulon antibacterial NRE15_03085 PF01594 AI-2E family transporter NRE15_03095 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NRE15_03095 PF00391 PEP-utilising enzyme, mobile domain NRE15_03100 PF01066 CDP-alcohol phosphatidyltransferase NRE15_03105 PF02666 Phosphatidylserine decarboxylase NRE15_03115 PF00391 PEP-utilising enzyme, mobile domain NRE15_03115 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NRE15_03130 PF00155 Aminotransferase class I and II NRE15_03135 PF01042 Endoribonuclease L-PSP NRE15_03140 PF06803 Protein of unknown function (DUF1232) NRE15_03145 PF01380 SIS domain NRE15_03150 PF01791 DeoC/LacD family aldolase NRE15_03155 PF07702 UTRA domain NRE15_03155 PF00392 Bacterial regulatory proteins, gntR family NRE15_03160 PF02424 ApbE family NRE15_03165 PF00890 FAD binding domain NRE15_03165 PF04205 FMN-binding domain NRE15_03165 PF03358 NADPH-dependent FMN reductase NRE15_03170 PF00890 FAD binding domain NRE15_03170 PF04205 FMN-binding domain NRE15_03170 PF03358 NADPH-dependent FMN reductase NRE15_03180 PF07883 Cupin domain NRE15_03190 PF03372 Endonuclease/Exonuclease/phosphatase family NRE15_03215 PF00271 Helicase conserved C-terminal domain NRE15_03215 PF00270 DEAD/DEAH box helicase NRE15_03215 PF08494 DEAD/H associated NRE15_03245 PF00270 DEAD/DEAH box helicase NRE15_03245 PF00271 Helicase conserved C-terminal domain NRE15_03245 PF00570 HRDC domain NRE15_03245 PF16124 RecQ zinc-binding NRE15_03245 PF09382 RQC domain NRE15_03250 PF00027 Cyclic nucleotide-binding domain NRE15_03250 PF13545 Crp-like helix-turn-helix domain NRE15_03270 PF04074 YhcH/YjgK/YiaL NRE15_03315 PF00005 ABC transporter NRE15_03325 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) NRE15_03330 PF04199 Putative cyclase NRE15_03355 PF07556 Protein of unknown function (DUF1538) NRE15_03360 PF01638 HxlR-like helix-turn-helix NRE15_03365 PF13460 NAD(P)H-binding NRE15_03370 PF03600 Citrate transporter NRE15_03370 PF02080 TrkA-C domain NRE15_03375 PF01593 Flavin containing amine oxidoreductase NRE15_03385 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NRE15_03385 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NRE15_03390 PF02515 CoA-transferase family III NRE15_03395 PF02803 Thiolase, C-terminal domain NRE15_03395 PF00108 Thiolase, N-terminal domain NRE15_03400 PF00378 Enoyl-CoA hydratase/isomerase NRE15_03445 PF12008 Type I restriction and modification enzyme - subunit R C terminal NRE15_03445 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NRE15_03445 PF18766 SWI2/SNF2 ATPase NRE15_03470 PF02384 N-6 DNA Methylase NRE15_03470 PF12161 HsdM N-terminal domain NRE15_03475 PF01638 HxlR-like helix-turn-helix NRE15_03495 PF00005 ABC transporter NRE15_03500 PF00155 Aminotransferase class I and II NRE15_03500 PF00392 Bacterial regulatory proteins, gntR family NRE15_03505 PF01638 HxlR-like helix-turn-helix NRE15_03515 PF02361 Cobalt transport protein NRE15_03520 PF00005 ABC transporter NRE15_03525 PF00005 ABC transporter NRE15_03545 PF00005 ABC transporter NRE15_03555 PF00196 Bacterial regulatory proteins, luxR family NRE15_03555 PF00072 Response regulator receiver domain NRE15_03560 PF07730 Histidine kinase NRE15_03565 PF00753 Metallo-beta-lactamase superfamily NRE15_03580 PF06628 Catalase-related immune-responsive NRE15_03580 PF00199 Catalase NRE15_03585 PF00005 ABC transporter NRE15_03600 PF00005 ABC transporter NRE15_03610 PF13091 PLD-like domain NRE15_03615 PF04237 YjbR NRE15_03620 PF00795 Carbon-nitrogen hydrolase NRE15_03635 PF01047 MarR family NRE15_03640 PF05979 Bacterial protein of unknown function (DUF896) NRE15_03645 PF13309 HTH domain NRE15_03645 PF08348 YheO-like PAS domain NRE15_03650 PF00155 Aminotransferase class I and II NRE15_03660 PF07687 Peptidase dimerisation domain NRE15_03660 PF01546 Peptidase family M20/M25/M40 NRE15_03675 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_03680 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_03685 PF13416 Bacterial extracellular solute-binding protein NRE15_03690 PF12833 Helix-turn-helix domain NRE15_03690 PF02311 AraC-like ligand binding domain NRE15_03695 PF02929 Beta galactosidase small chain NRE15_03695 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NRE15_03695 PF00703 Glycosyl hydrolases family 2 NRE15_03695 PF02837 Glycosyl hydrolases family 2, sugar binding domain NRE15_03700 PF00132 Bacterial transferase hexapeptide (six repeats) NRE15_03700 PF12464 Maltose acetyltransferase NRE15_03705 PF16874 Glycosyl hydrolase family 36 C-terminal domain NRE15_03705 PF16875 Glycosyl hydrolase family 36 N-terminal domain NRE15_03715 PF13378 Enolase C-terminal domain-like NRE15_03715 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NRE15_03720 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NRE15_03720 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NRE15_03725 PF02595 Glycerate kinase family NRE15_03730 PF00701 Dihydrodipicolinate synthetase family NRE15_03735 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NRE15_03735 PF13378 Enolase C-terminal domain-like NRE15_03740 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NRE15_03740 PF13378 Enolase C-terminal domain-like NRE15_03750 PF17853 GGDEF-like domain NRE15_03750 PF13556 PucR C-terminal helix-turn-helix domain NRE15_03750 PF05651 Putative sugar diacid recognition NRE15_03760 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NRE15_03780 PF08543 Phosphomethylpyrimidine kinase NRE15_03785 PF13667 ThiC-associated domain NRE15_03785 PF01964 Radical SAM ThiC family NRE15_03785 PF02581 Thiamine monophosphate synthase NRE15_03790 PF02110 Hydroxyethylthiazole kinase family NRE15_03795 PF00890 FAD binding domain NRE15_03795 PF04205 FMN-binding domain NRE15_03805 PF03807 NADP oxidoreductase coenzyme F420-dependent NRE15_03805 PF14748 Pyrroline-5-carboxylate reductase dimerisation NRE15_03815 PF03466 LysR substrate binding domain NRE15_03815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRE15_03820 PF01063 Amino-transferase class IV NRE15_03830 PF00440 Bacterial regulatory proteins, tetR family NRE15_03840 PF03050 Transposase IS66 family NRE15_03840 PF13007 Transposase C of IS166 homeodomain NRE15_03840 PF13005 zinc-finger binding domain of transposase IS66 NRE15_03840 PF13817 IS66 C-terminal element NRE15_03845 PF09962 Uncharacterized conserved protein (DUF2196) NRE15_03850 PF14748 Pyrroline-5-carboxylate reductase dimerisation NRE15_03850 PF03807 NADP oxidoreductase coenzyme F420-dependent NRE15_03855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRE15_03860 PF02913 FAD linked oxidases, C-terminal domain NRE15_03860 PF01565 FAD binding domain NRE15_03880 PF00890 FAD binding domain NRE15_03880 PF14537 Cytochrome c3 NRE15_03885 PF01546 Peptidase family M20/M25/M40 NRE15_03885 PF07687 Peptidase dimerisation domain NRE15_03895 PF01329 Pterin 4 alpha carbinolamine dehydratase NRE15_03900 PF00690 Cation transporter/ATPase, N-terminus NRE15_03900 PF00689 Cation transporting ATPase, C-terminus NRE15_03915 PF07929 Plasmid pRiA4b ORF-3-like protein NRE15_03925 PF08267 Cobalamin-independent synthase, N-terminal domain NRE15_03925 PF01717 Cobalamin-independent synthase, Catalytic domain NRE15_03950 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRE15_03950 PF14759 Reductase C-terminal NRE15_03960 PF00171 Aldehyde dehydrogenase family NRE15_03965 PF05368 NmrA-like family NRE15_03970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRE15_03970 PF03466 LysR substrate binding domain NRE15_04055 PF11867 Domain of unknown function (DUF3387) NRE15_04055 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NRE15_04055 PF18766 SWI2/SNF2 ATPase NRE15_04065 PF12161 HsdM N-terminal domain NRE15_04065 PF02384 N-6 DNA Methylase NRE15_04075 PF00579 tRNA synthetases class I (W and Y) NRE15_04085 PF01938 TRAM domain NRE15_04085 PF05958 tRNA (Uracil-5-)-methyltransferase NRE15_04090 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_04095 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_04115 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRE15_04115 PF14759 Reductase C-terminal NRE15_04135 PF02386 Cation transport protein NRE15_04140 PF02080 TrkA-C domain NRE15_04140 PF02254 TrkA-N domain NRE15_04150 PF00288 GHMP kinases N terminal domain NRE15_04150 PF08544 GHMP kinases C terminal NRE15_04155 PF00291 Pyridoxal-phosphate dependent enzyme NRE15_04160 PF00742 Homoserine dehydrogenase NRE15_04160 PF01842 ACT domain NRE15_04160 PF03447 Homoserine dehydrogenase, NAD binding domain NRE15_04175 PF13732 Domain of unknown function (DUF4162) NRE15_04175 PF00005 ABC transporter NRE15_04225 PF01476 LysM domain NRE15_04225 PF00005 ABC transporter NRE15_04230 PF05105 Bacteriophage holin family NRE15_04300 PF04860 Phage portal protein NRE15_04325 PF00145 C-5 cytosine-specific DNA methylase NRE15_04330 PF01555 DNA methylase NRE15_04335 PF02773 S-adenosylmethionine synthetase, C-terminal domain NRE15_04335 PF02772 S-adenosylmethionine synthetase, central domain NRE15_04335 PF00438 S-adenosylmethionine synthetase, N-terminal domain NRE15_04360 PF00176 SNF2 family N-terminal domain NRE15_04360 PF04434 SWIM zinc finger NRE15_04360 PF00271 Helicase conserved C-terminal domain NRE15_04435 PF01758 Sodium Bile acid symporter family NRE15_04440 PF06953 Arsenical resistance operon trans-acting repressor ArsD NRE15_04445 PF06953 Arsenical resistance operon trans-acting repressor ArsD NRE15_04450 PF01022 Bacterial regulatory protein, arsR family NRE15_04455 PF02374 Anion-transporting ATPase NRE15_04480 PF05958 tRNA (Uracil-5-)-methyltransferase NRE15_04480 PF01938 TRAM domain NRE15_04490 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRE15_04490 PF00367 phosphotransferase system, EIIB NRE15_04490 PF02378 Phosphotransferase system, EIIC NRE15_04500 PF00232 Glycosyl hydrolase family 1 NRE15_04520 PF00005 ABC transporter NRE15_04535 PF00144 Beta-lactamase NRE15_04540 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_04545 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_04555 PF00005 ABC transporter NRE15_04560 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_04565 PF02492 CobW/HypB/UreG, nucleotide-binding domain NRE15_04565 PF07683 Cobalamin synthesis protein cobW C-terminal domain NRE15_04570 PF01783 Ribosomal L32p protein family NRE15_04580 PF00471 Ribosomal protein L33 NRE15_04585 PF00253 Ribosomal protein S14p/S29e NRE15_04595 PF00005 ABC transporter NRE15_04625 PF02661 Fic/DOC family NRE15_04635 PF00486 Transcriptional regulatory protein, C terminal NRE15_04635 PF00072 Response regulator receiver domain NRE15_04640 PF00005 ABC transporter NRE15_04650 PF00512 His Kinase A (phospho-acceptor) domain NRE15_04650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_04665 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRE15_04665 PF14759 Reductase C-terminal NRE15_04670 PF04343 Protein of unknown function, DUF488 NRE15_04715 PF13419 Haloacid dehalogenase-like hydrolase NRE15_04730 PF06685 Protein of unknown function (DUF1186) NRE15_04735 PF08544 GHMP kinases C terminal NRE15_04735 PF00288 GHMP kinases N terminal domain NRE15_04740 PF00291 Pyridoxal-phosphate dependent enzyme NRE15_04745 PF01842 ACT domain NRE15_04745 PF00742 Homoserine dehydrogenase NRE15_04745 PF03447 Homoserine dehydrogenase, NAD binding domain NRE15_04755 PF01938 TRAM domain NRE15_04755 PF05958 tRNA (Uracil-5-)-methyltransferase NRE15_04780 PF00248 Aldo/keto reductase family NRE15_04785 PF00970 Oxidoreductase FAD-binding domain NRE15_04785 PF00042 Globin NRE15_04785 PF00175 Oxidoreductase NAD-binding domain NRE15_04790 PF01794 Ferric reductase like transmembrane component NRE15_04790 PF04205 FMN-binding domain NRE15_04795 PF03180 NLPA lipoprotein NRE15_04800 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_04805 PF09383 NIL domain NRE15_04805 PF00005 ABC transporter NRE15_04810 PF03591 AzlC protein NRE15_04815 PF05437 Branched-chain amino acid transport protein (AzlD) NRE15_04825 PF05128 Domain of unknown function (DUF697) NRE15_04830 PF02803 Thiolase, C-terminal domain NRE15_04830 PF00108 Thiolase, N-terminal domain NRE15_04845 PF00561 alpha/beta hydrolase fold NRE15_04850 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NRE15_04850 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NRE15_04865 PF12399 Branched-chain amino acid ATP-binding cassette transporter NRE15_04865 PF00005 ABC transporter NRE15_04880 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NRE15_04880 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NRE15_04885 PF00561 alpha/beta hydrolase fold NRE15_04885 PF00364 Biotin-requiring enzyme NRE15_04890 PF00356 Bacterial regulatory proteins, lacI family NRE15_04900 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_04905 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_04920 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_04925 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_04950 PF03050 Transposase IS66 family NRE15_04950 PF13817 IS66 C-terminal element NRE15_04950 PF13007 Transposase C of IS166 homeodomain NRE15_04950 PF13005 zinc-finger binding domain of transposase IS66 NRE15_04955 PF03618 Kinase/pyrophosphorylase NRE15_04960 PF00571 CBS domain NRE15_04960 PF08279 HTH domain NRE15_04965 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NRE15_04965 PF02896 PEP-utilising enzyme, TIM barrel domain NRE15_04965 PF00391 PEP-utilising enzyme, mobile domain NRE15_04970 PF08125 Mannitol dehydrogenase C-terminal domain NRE15_04970 PF01232 Mannitol dehydrogenase Rossmann domain NRE15_04975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRE15_04980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRE15_04980 PF05043 Mga helix-turn-helix domain NRE15_04980 PF00874 PRD domain NRE15_04980 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRE15_04980 PF08279 HTH domain NRE15_04985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRE15_04985 PF02378 Phosphotransferase system, EIIC NRE15_04990 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NRE15_05000 PF01418 Helix-turn-helix domain, rpiR family NRE15_05000 PF01380 SIS domain NRE15_05005 PF00367 phosphotransferase system, EIIB NRE15_05005 PF02378 Phosphotransferase system, EIIC NRE15_05010 PF01380 SIS domain NRE15_05020 PF00753 Metallo-beta-lactamase superfamily NRE15_05020 PF16123 Hydroxyacylglutathione hydrolase C-terminus NRE15_05025 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain NRE15_05030 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_05035 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_05060 PF00999 Sodium/hydrogen exchanger family NRE15_05080 PF00586 AIR synthase related protein, N-terminal domain NRE15_05080 PF02769 AIR synthase related protein, C-terminal domain NRE15_05080 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NRE15_05085 PF01259 SAICAR synthetase NRE15_05090 PF02222 ATP-grasp domain NRE15_05090 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NRE15_05095 PF00731 AIR carboxylase NRE15_05100 PF02844 Phosphoribosylglycinamide synthetase, N domain NRE15_05100 PF02843 Phosphoribosylglycinamide synthetase, C domain NRE15_05100 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NRE15_05105 PF02142 MGS-like domain NRE15_05105 PF01808 AICARFT/IMPCHase bienzyme NRE15_05110 PF00551 Formyl transferase NRE15_05115 PF00586 AIR synthase related protein, N-terminal domain NRE15_05115 PF02769 AIR synthase related protein, C-terminal domain NRE15_05120 PF13537 Glutamine amidotransferase domain NRE15_05120 PF00156 Phosphoribosyl transferase domain NRE15_05125 PF00728 Glycosyl hydrolase family 20, catalytic domain NRE15_05125 PF02838 Glycosyl hydrolase family 20, domain 2 NRE15_05135 PF00480 ROK family NRE15_05140 PF00480 ROK family NRE15_05145 PF00232 Glycosyl hydrolase family 1 NRE15_05150 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 NRE15_05150 PF07748 Glycosyl hydrolases family 38 C-terminal domain NRE15_05150 PF01074 Glycosyl hydrolases family 38 N-terminal domain NRE15_05150 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain NRE15_05150 PF09261 Alpha mannosidase middle domain NRE15_05170 PF01112 Asparaginase NRE15_05175 PF07687 Peptidase dimerisation domain NRE15_05175 PF01546 Peptidase family M20/M25/M40 NRE15_05180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NRE15_05180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRE15_05190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRE15_05190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NRE15_05195 PF00155 Aminotransferase class I and II NRE15_05200 PF01678 Diaminopimelate epimerase NRE15_05205 PF00356 Bacterial regulatory proteins, lacI family NRE15_05220 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_05225 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_05230 PF04854 Protein of unknown function, DUF624 NRE15_05240 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_05245 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_05265 PF00232 Glycosyl hydrolase family 1 NRE15_05270 PF00367 phosphotransferase system, EIIB NRE15_05270 PF02378 Phosphotransferase system, EIIC NRE15_05270 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRE15_05275 PF00874 PRD domain NRE15_05275 PF03123 CAT RNA binding domain NRE15_05330 PF08270 M protein trans-acting positive regulator (MGA) PRD domain NRE15_05330 PF08280 M protein trans-acting positive regulator (MGA) HTH domain NRE15_05330 PF05043 Mga helix-turn-helix domain NRE15_05335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NRE15_05335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NRE15_05335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NRE15_05335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NRE15_05345 PF13460 NAD(P)H-binding NRE15_05355 PF00106 short chain dehydrogenase NRE15_05360 PF14602 Hexapeptide repeat of succinyl-transferase NRE15_05360 PF00132 Bacterial transferase hexapeptide (six repeats) NRE15_05360 PF12464 Maltose acetyltransferase NRE15_05365 PF03466 LysR substrate binding domain NRE15_05365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRE15_05385 PF00474 Sodium:solute symporter family NRE15_05400 PF05853 beta-keto acid cleavage enzyme NRE15_05410 PF00892 EamA-like transporter family NRE15_05425 PF02515 CoA-transferase family III NRE15_05435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NRE15_05435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NRE15_05440 PF13556 PucR C-terminal helix-turn-helix domain NRE15_05440 PF17853 GGDEF-like domain NRE15_05440 PF05651 Putative sugar diacid recognition NRE15_05445 PF00108 Thiolase, N-terminal domain NRE15_05445 PF02803 Thiolase, C-terminal domain NRE15_05450 PF01144 Coenzyme A transferase NRE15_05455 PF01144 Coenzyme A transferase NRE15_05460 PF02667 Short chain fatty acid transporter NRE15_05465 PF13378 Enolase C-terminal domain-like NRE15_05465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NRE15_05475 PF00939 Sodium:sulfate symporter transmembrane region NRE15_05485 PF00561 alpha/beta hydrolase fold NRE15_05490 PF05853 beta-keto acid cleavage enzyme NRE15_05495 PF02311 AraC-like ligand binding domain NRE15_05495 PF12833 Helix-turn-helix domain NRE15_05500 PF16874 Glycosyl hydrolase family 36 C-terminal domain NRE15_05500 PF16875 Glycosyl hydrolase family 36 N-terminal domain NRE15_05505 PF01547 Bacterial extracellular solute-binding protein NRE15_05510 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_05515 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_05520 PF00128 Alpha amylase, catalytic domain NRE15_05525 PF02557 D-alanyl-D-alanine carboxypeptidase NRE15_05570 PF00356 Bacterial regulatory proteins, lacI family NRE15_05580 PF02449 Beta-galactosidase NRE15_05580 PF08533 Beta-galactosidase C-terminal domain NRE15_05580 PF08532 Beta-galactosidase trimerisation domain NRE15_05590 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_05595 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_05600 PF13416 Bacterial extracellular solute-binding protein NRE15_05610 PF00488 MutS domain V NRE15_05610 PF01713 Smr domain NRE15_05625 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_05635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NRE15_05635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NRE15_05635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NRE15_05635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NRE15_05650 PF00455 DeoR C terminal sensor domain NRE15_05650 PF08220 DeoR-like helix-turn-helix domain NRE15_05655 PF02481 DNA recombination-mediator protein A NRE15_05660 PF13416 Bacterial extracellular solute-binding protein NRE15_05665 PF05448 Acetyl xylan esterase (AXE1) NRE15_05680 PF00106 short chain dehydrogenase NRE15_05705 PF00746 LPXTG cell wall anchor motif NRE15_05705 PF13199 Glycosyl hydrolase family 66 NRE15_05715 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_05720 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_05730 PF00072 Response regulator receiver domain NRE15_05730 PF12833 Helix-turn-helix domain NRE15_05735 PF06580 Histidine kinase NRE15_05735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_05735 PF02743 Cache domain NRE15_05735 PF00672 HAMP domain NRE15_05745 PF03358 NADPH-dependent FMN reductase NRE15_05745 PF04205 FMN-binding domain NRE15_05745 PF00890 FAD binding domain NRE15_05750 PF01370 NAD dependent epimerase/dehydratase family NRE15_05755 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NRE15_05755 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NRE15_05755 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NRE15_05790 PF00248 Aldo/keto reductase family NRE15_05820 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NRE15_05820 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NRE15_05820 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NRE15_05840 PF00004 ATPase family associated with various cellular activities (AAA) NRE15_05845 PF00144 Beta-lactamase NRE15_05865 PF04794 YdjC-like protein NRE15_05875 PF03830 PTS system sorbose subfamily IIB component NRE15_05880 PF03609 PTS system sorbose-specific iic component NRE15_05885 PF03613 PTS system mannose/fructose/sorbose family IID component NRE15_05890 PF01979 Amidohydrolase family NRE15_05895 PF03702 Anhydro-N-acetylmuramic acid kinase NRE15_05900 PF01418 Helix-turn-helix domain, rpiR family NRE15_05900 PF01380 SIS domain NRE15_05910 PF02378 Phosphotransferase system, EIIC NRE15_05925 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NRE15_05930 PF01380 SIS domain NRE15_05935 PF00232 Glycosyl hydrolase family 1 NRE15_05940 PF02378 Phosphotransferase system, EIIC NRE15_05940 PF00367 phosphotransferase system, EIIB NRE15_05940 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRE15_05945 PF03123 CAT RNA binding domain NRE15_05945 PF00874 PRD domain NRE15_06030 PF02378 Phosphotransferase system, EIIC NRE15_06035 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NRE15_06040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRE15_06045 PF00232 Glycosyl hydrolase family 1 NRE15_06050 PF01380 SIS domain NRE15_06050 PF01418 Helix-turn-helix domain, rpiR family NRE15_06100 PF01695 IstB-like ATP binding protein NRE15_06160 PF01695 IstB-like ATP binding protein NRE15_06190 PF01695 IstB-like ATP binding protein NRE15_06200 PF01695 IstB-like ATP binding protein NRE15_06205 PF02899 Phage integrase, N-terminal SAM-like domain NRE15_06205 PF00589 Phage integrase family NRE15_06215 PF01695 IstB-like ATP binding protein NRE15_06220 PF00665 Integrase core domain NRE15_06225 PF00665 Integrase core domain NRE15_06240 PF00535 Glycosyl transferase family 2 NRE15_06260 PF02350 UDP-N-acetylglucosamine 2-epimerase NRE15_06265 PF01370 NAD dependent epimerase/dehydratase family NRE15_06270 PF02719 Polysaccharide biosynthesis protein NRE15_06270 PF08485 Polysaccharide biosynthesis protein C-terminal NRE15_06285 PF02397 Bacterial sugar transferase NRE15_06290 PF13614 AAA domain NRE15_06295 PF13807 G-rich domain on putative tyrosine kinase NRE15_06295 PF02706 Chain length determinant protein NRE15_06305 PF02719 Polysaccharide biosynthesis protein NRE15_06330 PF13439 Glycosyltransferase Family 4 NRE15_06330 PF00534 Glycosyl transferases group 1 NRE15_06335 PF13614 AAA domain NRE15_06340 PF02706 Chain length determinant protein NRE15_06355 PF03023 Lipid II flippase MurJ NRE15_06380 PF02397 Bacterial sugar transferase NRE15_06385 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NRE15_06395 PF02661 Fic/DOC family NRE15_06395 PF12728 Helix-turn-helix domain NRE15_06405 PF00480 ROK family NRE15_06430 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_06435 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_06450 PF01380 SIS domain NRE15_06450 PF01418 Helix-turn-helix domain, rpiR family NRE15_06455 PF02056 Family 4 glycosyl hydrolase NRE15_06455 PF11975 Family 4 glycosyl hydrolase C-terminal domain NRE15_06465 PF13088 BNR repeat-like domain NRE15_06465 PF04650 YSIRK type signal peptide NRE15_06465 PF02973 Sialidase, N-terminal domain NRE15_06470 PF13088 BNR repeat-like domain NRE15_06470 PF02973 Sialidase, N-terminal domain NRE15_06470 PF04650 YSIRK type signal peptide NRE15_06475 PF00480 ROK family NRE15_06485 PF13007 Transposase C of IS166 homeodomain NRE15_06485 PF13817 IS66 C-terminal element NRE15_06485 PF03050 Transposase IS66 family NRE15_06485 PF13005 zinc-finger binding domain of transposase IS66 NRE15_06490 PF00701 Dihydrodipicolinate synthetase family NRE15_06495 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase NRE15_06505 PF13492 GAF domain NRE15_06505 PF07694 5TMR of 5TMR-LYT NRE15_06505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_06505 PF06580 Histidine kinase NRE15_06510 PF12833 Helix-turn-helix domain NRE15_06510 PF00072 Response regulator receiver domain NRE15_06515 PF03050 Transposase IS66 family NRE15_06515 PF13007 Transposase C of IS166 homeodomain NRE15_06515 PF13005 zinc-finger binding domain of transposase IS66 NRE15_06515 PF13817 IS66 C-terminal element NRE15_06530 PF00754 F5/8 type C domain NRE15_06530 PF18080 Galactose mutarotase-like fold domain NRE15_06530 PF17974 Galactose-binding domain-like NRE15_06530 PF17995 Endo-alpha-N-acetylgalactosaminidase N-terminal NRE15_06530 PF17451 Glycosyl hydrolase 101 beta sandwich domain NRE15_06530 PF12905 Endo-alpha-N-acetylgalactosaminidase NRE15_06530 PF04650 YSIRK type signal peptide NRE15_06535 PF02837 Glycosyl hydrolases family 2, sugar binding domain NRE15_06535 PF02929 Beta galactosidase small chain NRE15_06535 PF00703 Glycosyl hydrolases family 2 NRE15_06535 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NRE15_06555 PF01547 Bacterial extracellular solute-binding protein NRE15_06565 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_06570 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_06575 PF09587 Bacterial capsule synthesis protein PGA_cap NRE15_06600 PF09371 Tex-like protein N-terminal domain NRE15_06600 PF16921 Tex protein YqgF-like domain NRE15_06600 PF00575 S1 RNA binding domain NRE15_06600 PF17674 HHH domain NRE15_06605 PF00149 Calcineurin-like phosphoesterase NRE15_06610 PF00860 Permease family NRE15_06620 PF00375 Sodium:dicarboxylate symporter family NRE15_06625 PF00696 Amino acid kinase family NRE15_06630 PF11392 Protein of unknown function (DUF2877) NRE15_06635 PF06545 Protein of unknown function (DUF1116) NRE15_06645 PF07690 Major Facilitator Superfamily NRE15_06650 PF01546 Peptidase family M20/M25/M40 NRE15_06655 PF17853 GGDEF-like domain NRE15_06655 PF13556 PucR C-terminal helix-turn-helix domain NRE15_06655 PF07905 Purine catabolism regulatory protein-like family NRE15_06660 PF02615 Malate/L-lactate dehydrogenase NRE15_06665 PF07883 Cupin domain NRE15_06665 PF05899 Protein of unknown function (DUF861) NRE15_06670 PF05979 Bacterial protein of unknown function (DUF896) NRE15_06685 PF01479 S4 domain NRE15_06685 PF00849 RNA pseudouridylate synthase NRE15_06690 PF01476 LysM domain NRE15_06690 PF06725 3D domain NRE15_06700 PF01022 Bacterial regulatory protein, arsR family NRE15_06705 PF00155 Aminotransferase class I and II NRE15_06710 PF01037 Lrp/AsnC ligand binding domain NRE15_06750 PF03050 Transposase IS66 family NRE15_06750 PF13817 IS66 C-terminal element NRE15_06750 PF13007 Transposase C of IS166 homeodomain NRE15_06750 PF13005 zinc-finger binding domain of transposase IS66 NRE15_06770 PF02557 D-alanyl-D-alanine carboxypeptidase NRE15_06780 PF00005 ABC transporter NRE15_06780 PF00664 ABC transporter transmembrane region NRE15_06785 PF00005 ABC transporter NRE15_06785 PF00664 ABC transporter transmembrane region NRE15_06790 PF00512 His Kinase A (phospho-acceptor) domain NRE15_06790 PF00672 HAMP domain NRE15_06790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_06795 PF00072 Response regulator receiver domain NRE15_06795 PF00486 Transcriptional regulatory protein, C terminal NRE15_06805 PF02417 Chromate transporter NRE15_06810 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRE15_06820 PF00296 Luciferase-like monooxygenase NRE15_06835 PF13840 ACT domain NRE15_06835 PF00696 Amino acid kinase family NRE15_06845 PF01261 Xylose isomerase-like TIM barrel NRE15_06850 PF00248 Aldo/keto reductase family NRE15_06860 PF01177 Asp/Glu/Hydantoin racemase NRE15_06865 PF00085 Thioredoxin NRE15_06880 PF07676 WD40-like Beta Propeller Repeat NRE15_06880 PF00326 Prolyl oligopeptidase family NRE15_06885 PF13458 Periplasmic binding protein NRE15_06895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NRE15_06895 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NRE15_06900 PF01261 Xylose isomerase-like TIM barrel NRE15_06905 PF00480 ROK family NRE15_06910 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NRE15_06910 PF04616 Glycosyl hydrolases family 43 NRE15_06920 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_06925 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_06940 PF12833 Helix-turn-helix domain NRE15_06945 PF03061 Thioesterase superfamily NRE15_06955 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_06960 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_06975 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_06980 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_07005 PF16369 C-terminal lipocalin-like domain NRE15_07005 PF04616 Glycosyl hydrolases family 43 NRE15_07010 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NRE15_07020 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_07025 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_07040 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NRE15_07045 PF04616 Glycosyl hydrolases family 43 NRE15_07045 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain NRE15_07055 PF11762 L-arabinose isomerase C-terminal domain NRE15_07055 PF02610 L-arabinose isomerase NRE15_07060 PF00596 Class II Aldolase and Adducin N-terminal domain NRE15_07075 PF00392 Bacterial regulatory proteins, gntR family NRE15_07090 PF00232 Glycosyl hydrolase family 1 NRE15_07095 PF00232 Glycosyl hydrolase family 1 NRE15_07100 PF02378 Phosphotransferase system, EIIC NRE15_07100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRE15_07105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRE15_07110 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NRE15_07120 PF03610 PTS system fructose IIA component NRE15_07120 PF00874 PRD domain NRE15_07120 PF00158 Sigma-54 interaction domain NRE15_07125 PF02056 Family 4 glycosyl hydrolase NRE15_07125 PF11975 Family 4 glycosyl hydrolase C-terminal domain NRE15_07140 PF00583 Acetyltransferase (GNAT) family NRE15_07155 PF13411 MerR HTH family regulatory protein NRE15_07160 PF02645 Uncharacterised protein, DegV family COG1307 NRE15_07200 PF00890 FAD binding domain NRE15_07200 PF04205 FMN-binding domain NRE15_07200 PF03358 NADPH-dependent FMN reductase NRE15_07205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NRE15_07205 PF02785 Biotin carboxylase C-terminal domain NRE15_07205 PF00289 Biotin carboxylase, N-terminal domain NRE15_07205 PF02436 Conserved carboxylase domain NRE15_07205 PF00682 HMGL-like NRE15_07205 PF00364 Biotin-requiring enzyme NRE15_07210 PF01061 ABC-2 type transporter NRE15_07215 PF00005 ABC transporter NRE15_07220 PF01451 Low molecular weight phosphotyrosine protein phosphatase NRE15_07260 PF01238 Phosphomannose isomerase type I NRE15_07265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRE15_07265 PF00874 PRD domain NRE15_07265 PF05043 Mga helix-turn-helix domain NRE15_07265 PF08279 HTH domain NRE15_07270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRE15_07270 PF02378 Phosphotransferase system, EIIC NRE15_07270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRE15_07280 PF00380 Ribosomal protein S9/S16 NRE15_07290 PF05343 M42 glutamyl aminopeptidase NRE15_07295 PF02578 Multi-copper polyphenol oxidoreductase laccase NRE15_07305 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_07315 PF00005 ABC transporter NRE15_07325 PF01476 LysM domain NRE15_07325 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NRE15_07330 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NRE15_07330 PF01476 LysM domain NRE15_07350 PF00483 Nucleotidyl transferase NRE15_07370 PF03466 LysR substrate binding domain NRE15_07370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRE15_07380 PF01418 Helix-turn-helix domain, rpiR family NRE15_07380 PF01380 SIS domain NRE15_07390 PF00005 ABC transporter NRE15_07395 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_07405 PF13350 Tyrosine phosphatase family NRE15_07410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRE15_07410 PF00205 Thiamine pyrophosphate enzyme, central domain NRE15_07410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NRE15_07415 PF00248 Aldo/keto reductase family NRE15_07435 PF00005 ABC transporter NRE15_07440 PF07730 Histidine kinase NRE15_07440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_07445 PF00196 Bacterial regulatory proteins, luxR family NRE15_07445 PF00072 Response regulator receiver domain NRE15_07455 PF00293 NUDIX domain NRE15_07465 PF07563 Protein of unknown function (DUF1541) NRE15_07470 PF03831 PhnA domain NRE15_07470 PF08274 PhnA Zinc-Ribbon NRE15_07475 PF17755 UvrA DNA-binding domain NRE15_07475 PF17760 UvrA interaction domain NRE15_07480 PF00248 Aldo/keto reductase family NRE15_07485 PF01494 FAD binding domain NRE15_07490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRE15_07490 PF03466 LysR substrate binding domain NRE15_07500 PF09827 CRISPR associated protein Cas2 NRE15_07505 PF01867 CRISPR associated protein Cas1 NRE15_07535 PF00378 Enoyl-CoA hydratase/isomerase NRE15_07540 PF13302 Acetyltransferase (GNAT) domain NRE15_07545 PF01022 Bacterial regulatory protein, arsR family NRE15_07595 PF14659 Phage integrase, N-terminal SAM-like domain NRE15_07595 PF00589 Phage integrase family NRE15_07600 PF02540 NAD synthase NRE15_07600 PF00958 GMP synthase C terminal domain NRE15_07600 PF00117 Glutamine amidotransferase class-I NRE15_07605 PF00485 Phosphoribulokinase / Uridine kinase family NRE15_07610 PF00288 GHMP kinases N terminal domain NRE15_07610 PF08544 GHMP kinases C terminal NRE15_07610 PF10509 Galactokinase galactose-binding signature NRE15_07620 PF00288 GHMP kinases N terminal domain NRE15_07620 PF08544 GHMP kinases C terminal NRE15_07625 PF01070 FMN-dependent dehydrogenase NRE15_07640 PF13439 Glycosyltransferase Family 4 NRE15_07640 PF00534 Glycosyl transferases group 1 NRE15_07645 PF02885 Glycosyl transferase family, helical bundle domain NRE15_07645 PF00591 Glycosyl transferase family, a/b domain NRE15_07645 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NRE15_07650 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NRE15_07665 PF00535 Glycosyl transferase family 2 NRE15_07680 PF13416 Bacterial extracellular solute-binding protein NRE15_07685 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_07690 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_07695 PF08402 TOBE domain NRE15_07695 PF00005 ABC transporter NRE15_07700 PF01565 FAD binding domain NRE15_07700 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NRE15_07710 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NRE15_07720 PF01515 Phosphate acetyl/butaryl transferase NRE15_07735 PF00268 Ribonucleotide reductase, small chain NRE15_07740 PF00317 Ribonucleotide reductase, all-alpha domain NRE15_07740 PF02867 Ribonucleotide reductase, barrel domain NRE15_07740 PF08343 Ribonucleotide reductase N-terminal NRE15_07745 PF07972 NrdI Flavodoxin like NRE15_07755 PF03965 Penicillinase repressor NRE15_07765 PF00403 Heavy-metal-associated domain NRE15_07780 PF02541 Ppx/GppA phosphatase family NRE15_07785 PF13090 Polyphosphate kinase C-terminal domain 2 NRE15_07785 PF17941 Polyphosphate kinase C-terminal domain 1 NRE15_07785 PF13089 Polyphosphate kinase N-terminal domain NRE15_07785 PF02503 Polyphosphate kinase middle domain NRE15_07800 PF07687 Peptidase dimerisation domain NRE15_07800 PF01546 Peptidase family M20/M25/M40 NRE15_07820 PF12848 ABC transporter NRE15_07820 PF00005 ABC transporter NRE15_07825 PF00478 IMP dehydrogenase / GMP reductase domain NRE15_07830 PF01709 Transcriptional regulator NRE15_07835 PF00255 Glutathione peroxidase NRE15_07840 PF00571 CBS domain NRE15_07840 PF01368 DHH family NRE15_07840 PF02272 DHHA1 domain NRE15_07840 PF01743 Poly A polymerase head domain NRE15_07840 PF12627 Probable RNA and SrmB- binding site of polymerase A NRE15_07845 PF00005 ABC transporter NRE15_07850 PF00005 ABC transporter NRE15_07850 PF12399 Branched-chain amino acid ATP-binding cassette transporter NRE15_07855 PF02653 Branched-chain amino acid transport system / permease component NRE15_07855 PF11862 Domain of unknown function (DUF3382) NRE15_07860 PF02653 Branched-chain amino acid transport system / permease component NRE15_07865 PF13407 Periplasmic binding protein domain NRE15_07865 PF00356 Bacterial regulatory proteins, lacI family NRE15_07870 PF03976 Polyphosphate kinase 2 (PPK2) NRE15_07880 PF01416 tRNA pseudouridine synthase NRE15_07885 PF02361 Cobalt transport protein NRE15_07890 PF00005 ABC transporter NRE15_07895 PF00005 ABC transporter NRE15_07900 PF01196 Ribosomal protein L17 NRE15_07905 PF01000 RNA polymerase Rpb3/RpoA insert domain NRE15_07905 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NRE15_07905 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NRE15_07910 PF00411 Ribosomal protein S11 NRE15_07915 PF00416 Ribosomal protein S13/S18 NRE15_07920 PF00444 Ribosomal protein L36 NRE15_07925 PF01176 Translation initiation factor 1A / IF-1 NRE15_07930 PF05191 Adenylate kinase, active site lid NRE15_07935 PF00344 SecY translocase NRE15_07940 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NRE15_07945 PF00327 Ribosomal protein L30p/L7e NRE15_07950 PF00333 Ribosomal protein S5, N-terminal domain NRE15_07950 PF03719 Ribosomal protein S5, C-terminal domain NRE15_07955 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NRE15_07960 PF00347 Ribosomal protein L6 NRE15_07965 PF00410 Ribosomal protein S8 NRE15_07970 PF00253 Ribosomal protein S14p/S29e NRE15_07975 PF00673 ribosomal L5P family C-terminus NRE15_07975 PF00281 Ribosomal protein L5 NRE15_07980 PF00467 KOW motif NRE15_07980 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NRE15_07985 PF00238 Ribosomal protein L14p/L23e NRE15_07990 PF00366 Ribosomal protein S17 NRE15_07995 PF00831 Ribosomal L29 protein NRE15_08000 PF00252 Ribosomal protein L16p/L10e NRE15_08005 PF07650 KH domain NRE15_08005 PF00189 Ribosomal protein S3, C-terminal domain NRE15_08010 PF00237 Ribosomal protein L22p/L17e NRE15_08015 PF00203 Ribosomal protein S19 NRE15_08020 PF00181 Ribosomal Proteins L2, RNA binding domain NRE15_08020 PF03947 Ribosomal Proteins L2, C-terminal domain NRE15_08025 PF00276 Ribosomal protein L23 NRE15_08030 PF00573 Ribosomal protein L4/L1 family NRE15_08035 PF00297 Ribosomal protein L3 NRE15_08040 PF00338 Ribosomal protein S10p/S20e NRE15_08055 PF05552 Conserved TM helix NRE15_08060 PF03143 Elongation factor Tu C-terminal domain NRE15_08060 PF03144 Elongation factor Tu domain 2 NRE15_08060 PF00009 Elongation factor Tu GTP binding domain NRE15_08065 PF00679 Elongation factor G C-terminus NRE15_08065 PF00009 Elongation factor Tu GTP binding domain NRE15_08065 PF03144 Elongation factor Tu domain 2 NRE15_08065 PF14492 Elongation Factor G, domain II NRE15_08065 PF03764 Elongation factor G, domain IV NRE15_08070 PF00177 Ribosomal protein S7p/S5e NRE15_08075 PF00164 Ribosomal protein S12/S23 NRE15_08085 PF00152 tRNA synthetases class II (D, K and N) NRE15_08085 PF01336 OB-fold nucleic acid binding domain NRE15_08090 PF01430 Hsp33 protein NRE15_08095 PF01434 Peptidase family M41 NRE15_08095 PF06480 FtsH Extracellular NRE15_08095 PF00004 ATPase family associated with various cellular activities (AAA) NRE15_08095 PF17862 AAA+ lid domain NRE15_08100 PF00156 Phosphoribosyl transferase domain NRE15_08105 PF01171 PP-loop family NRE15_08105 PF11734 TilS substrate C-terminal domain NRE15_08110 PF00575 S1 RNA binding domain NRE15_08120 PF01479 S4 domain NRE15_08125 PF00271 Helicase conserved C-terminal domain NRE15_08125 PF03461 TRCF domain NRE15_08125 PF17757 UvrB interaction domain NRE15_08125 PF00270 DEAD/DEAH box helicase NRE15_08125 PF02559 CarD-like/TRCF domain NRE15_08130 PF01195 Peptidyl-tRNA hydrolase NRE15_08135 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NRE15_08135 PF00056 lactate/malate dehydrogenase, NAD binding domain NRE15_08140 PF06257 Biofilm formation stimulator VEG NRE15_08145 PF00398 Ribosomal RNA adenine dimethylase NRE15_08150 PF13331 Domain of unknown function (DUF4093) NRE15_08150 PF01751 Toprim domain NRE15_08155 PF01026 TatD related DNase NRE15_08165 PF09334 tRNA synthetases class I (M) NRE15_08165 PF08264 Anticodon-binding domain of tRNA NRE15_08165 PF01588 Putative tRNA binding domain NRE15_08180 PF00317 Ribonucleotide reductase, all-alpha domain NRE15_08180 PF02867 Ribonucleotide reductase, barrel domain NRE15_08180 PF03477 ATP cone domain NRE15_08185 PF01965 DJ-1/PfpI family NRE15_08215 PF01479 S4 domain NRE15_08215 PF00579 tRNA synthetases class I (W and Y) NRE15_08225 PF00005 ABC transporter NRE15_08225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRE15_08230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRE15_08230 PF00005 ABC transporter NRE15_08235 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_08235 PF12911 N-terminal TM domain of oligopeptide transport permease C NRE15_08240 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_08245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRE15_08255 PF02525 Flavodoxin-like fold NRE15_08265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_08265 PF00512 His Kinase A (phospho-acceptor) domain NRE15_08265 PF00672 HAMP domain NRE15_08270 PF00486 Transcriptional regulatory protein, C terminal NRE15_08270 PF00072 Response regulator receiver domain NRE15_08275 PF00436 Single-strand binding protein family NRE15_08280 PF02650 WhiA C-terminal HTH domain NRE15_08280 PF14527 WhiA LAGLIDADG-like domain NRE15_08280 PF10298 WhiA N-terminal LAGLIDADG-like domain NRE15_08285 PF01933 Uncharacterised protein family UPF0052 NRE15_08290 PF03668 P-loop ATPase protein family NRE15_08295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NRE15_08295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NRE15_08295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NRE15_08295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NRE15_08300 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRE15_08305 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NRE15_08305 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NRE15_08310 PF01790 Prolipoprotein diacylglyceryl transferase NRE15_08315 PF07475 HPr Serine kinase C-terminal domain NRE15_08315 PF02603 HPr Serine kinase N terminus NRE15_08340 PF00005 ABC transporter NRE15_08340 PF17755 UvrA DNA-binding domain NRE15_08340 PF17760 UvrA interaction domain NRE15_08345 PF12849 PBP superfamily domain NRE15_08350 PF01895 PhoU domain NRE15_08355 PF00005 ABC transporter NRE15_08360 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_08365 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_08370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_08370 PF00512 His Kinase A (phospho-acceptor) domain NRE15_08370 PF00989 PAS fold NRE15_08370 PF16736 Single Cache-like NRE15_08375 PF00072 Response regulator receiver domain NRE15_08375 PF00486 Transcriptional regulatory protein, C terminal NRE15_08380 PF02687 FtsX-like permease family NRE15_08380 PF18075 FtsX extracellular domain NRE15_08385 PF00005 ABC transporter NRE15_08395 PF02810 SEC-C motif NRE15_08395 PF07517 SecA DEAD-like domain NRE15_08395 PF01043 SecA preprotein cross-linking domain NRE15_08395 PF07516 SecA Wing and Scaffold domain NRE15_08400 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NRE15_08400 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NRE15_08410 PF04851 Type III restriction enzyme, res subunit NRE15_08410 PF00271 Helicase conserved C-terminal domain NRE15_08420 PF02645 Uncharacterised protein, DegV family COG1307 NRE15_08425 PF09186 Domain of unknown function (DUF1949) NRE15_08425 PF01205 Uncharacterized protein family UPF0029 NRE15_08430 PF00953 Glycosyl transferase family 4 NRE15_08435 PF02540 NAD synthase NRE15_08440 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NRE15_08440 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain NRE15_08440 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NRE15_08450 PF02397 Bacterial sugar transferase NRE15_08455 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NRE15_08455 PF14572 Phosphoribosyl synthetase-associated domain NRE15_08460 PF00483 Nucleotidyl transferase NRE15_08460 PF00132 Bacterial transferase hexapeptide (six repeats) NRE15_08465 PF00156 Phosphoribosyl transferase domain NRE15_08465 PF09182 Bacterial purine repressor, N-terminal NRE15_08470 PF05816 Toxic anion resistance protein (TelA) NRE15_08490 PF00950 ABC 3 transport family NRE15_08495 PF00005 ABC transporter NRE15_08500 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment NRE15_08500 PF01297 Zinc-uptake complex component A periplasmic NRE15_08505 PF12631 MnmE helical domain NRE15_08505 PF01926 50S ribosome-binding GTPase NRE15_08505 PF10396 GTP-binding protein TrmE N-terminus NRE15_08510 PF04298 Putative neutral zinc metallopeptidase NRE15_08515 PF00005 ABC transporter NRE15_08520 PF02653 Branched-chain amino acid transport system / permease component NRE15_08525 PF04392 ABC transporter substrate binding protein NRE15_08545 PF01545 Cation efflux family NRE15_08550 PF01022 Bacterial regulatory protein, arsR family NRE15_08560 PF00239 Resolvase, N terminal domain NRE15_08560 PF02796 Helix-turn-helix domain of resolvase NRE15_08565 PF09299 Mu transposase, C-terminal NRE15_08565 PF00665 Integrase core domain NRE15_08570 PF13401 AAA domain NRE15_08575 PF00005 ABC transporter NRE15_08575 PF00664 ABC transporter transmembrane region NRE15_08580 PF00005 ABC transporter NRE15_08580 PF00664 ABC transporter transmembrane region NRE15_08595 PF00309 Sigma-54 factor, Activator interacting domain (AID) NRE15_08595 PF04963 Sigma-54 factor, core binding domain NRE15_08595 PF04552 Sigma-54, DNA binding domain NRE15_08600 PF04228 Putative neutral zinc metallopeptidase NRE15_08605 PF13091 PLD-like domain NRE15_08610 PF02779 Transketolase, pyrimidine binding domain NRE15_08610 PF00456 Transketolase, thiamine diphosphate binding domain NRE15_08610 PF02780 Transketolase, C-terminal domain NRE15_08620 PF01022 Bacterial regulatory protein, arsR family NRE15_08630 PF13419 Haloacid dehalogenase-like hydrolase NRE15_08640 PF00465 Iron-containing alcohol dehydrogenase NRE15_08655 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NRE15_08655 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NRE15_08655 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NRE15_08655 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NRE15_08665 PF02457 DisA bacterial checkpoint controller nucleotide-binding NRE15_08670 PF01809 Putative membrane protein insertion efficiency factor NRE15_08680 PF01321 Creatinase/Prolidase N-terminal domain NRE15_08680 PF00557 Metallopeptidase family M24 NRE15_08685 PF01425 Amidase NRE15_08695 PF02632 BioY family NRE15_08700 PF00005 ABC transporter NRE15_08705 PF09084 NMT1/THI5 like NRE15_08720 PF00294 pfkB family carbohydrate kinase NRE15_08725 PF01370 NAD dependent epimerase/dehydratase family NRE15_08730 PF17853 GGDEF-like domain NRE15_08730 PF12833 Helix-turn-helix domain NRE15_08735 PF00664 ABC transporter transmembrane region NRE15_08735 PF00005 ABC transporter NRE15_08740 PF00664 ABC transporter transmembrane region NRE15_08740 PF00005 ABC transporter NRE15_08750 PF00005 ABC transporter NRE15_08750 PF13732 Domain of unknown function (DUF4162) NRE15_08760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRE15_08765 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_08770 PF12911 N-terminal TM domain of oligopeptide transport permease C NRE15_08770 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_08775 PF00005 ABC transporter NRE15_08775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRE15_08780 PF00005 ABC transporter NRE15_08780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRE15_08790 PF01712 Deoxynucleoside kinase NRE15_08825 PF04998 RNA polymerase Rpb1, domain 5 NRE15_08825 PF05000 RNA polymerase Rpb1, domain 4 NRE15_08825 PF04983 RNA polymerase Rpb1, domain 3 NRE15_08825 PF00623 RNA polymerase Rpb1, domain 2 NRE15_08825 PF04997 RNA polymerase Rpb1, domain 1 NRE15_08830 PF04565 RNA polymerase Rpb2, domain 3 NRE15_08830 PF04561 RNA polymerase Rpb2, domain 2 NRE15_08830 PF04563 RNA polymerase beta subunit NRE15_08830 PF10385 RNA polymerase beta subunit external 1 domain NRE15_08830 PF04560 RNA polymerase Rpb2, domain 7 NRE15_08830 PF00562 RNA polymerase Rpb2, domain 6 NRE15_08835 PF05175 Methyltransferase small domain NRE15_08840 PF01238 Phosphomannose isomerase type I NRE15_08850 PF00542 Ribosomal protein L7/L12 C-terminal domain NRE15_08850 PF16320 Ribosomal protein L7/L12 dimerisation domain NRE15_08855 PF00466 Ribosomal protein L10 NRE15_08860 PF00687 Ribosomal protein L1p/L10e family NRE15_08865 PF03946 Ribosomal protein L11, N-terminal domain NRE15_08865 PF00298 Ribosomal protein L11, RNA binding domain NRE15_08880 PF06874 Firmicute fructose-1,6-bisphosphatase NRE15_08885 PF00884 Sulfatase NRE15_08890 PF00756 Putative esterase NRE15_08890 PF01476 LysM domain NRE15_08895 PF00005 ABC transporter NRE15_08905 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NRE15_08905 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NRE15_08910 PF02805 Metal binding domain of Ada NRE15_08910 PF12833 Helix-turn-helix domain NRE15_08915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRE15_08915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NRE15_08920 PF02557 D-alanyl-D-alanine carboxypeptidase NRE15_08925 PF00128 Alpha amylase, catalytic domain NRE15_08935 PF02357 Transcription termination factor nusG NRE15_08935 PF00467 KOW motif NRE15_08940 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NRE15_08945 PF00471 Ribosomal protein L33 NRE15_08950 PF00480 ROK family NRE15_08955 PF04542 Sigma-70 region 2 NRE15_08955 PF08281 Sigma-70, region 4 NRE15_08960 PF05991 YacP-like NYN domain NRE15_08965 PF00588 SpoU rRNA Methylase family NRE15_08965 PF08032 RNA 2'-O ribose methyltransferase substrate binding NRE15_08970 PF00636 Ribonuclease III domain NRE15_08975 PF01406 tRNA synthetases class I (C) catalytic domain NRE15_08975 PF09190 DALR domain NRE15_08980 PF00749 tRNA synthetases class I (E and Q), catalytic domain NRE15_08990 PF18073 Rubredoxin metal binding domain NRE15_08995 PF00692 dUTPase NRE15_09000 PF03459 TOBE domain NRE15_09000 PF17912 MalK OB fold domain NRE15_09000 PF00005 ABC transporter NRE15_09010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRE15_09010 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRE15_09015 PF09154 Domain of unknown function (DUF1939) NRE15_09015 PF00128 Alpha amylase, catalytic domain NRE15_09020 PF03951 Glutamine synthetase, beta-Grasp domain NRE15_09020 PF00120 Glutamine synthetase, catalytic domain NRE15_09025 PF13411 MerR HTH family regulatory protein NRE15_09035 PF01545 Cation efflux family NRE15_09035 PF16916 Dimerisation domain of Zinc Transporter NRE15_09040 PF00709 Adenylosuccinate synthetase NRE15_09045 PF00772 DnaB-like helicase N terminal domain NRE15_09045 PF03796 DnaB-like helicase C terminal domain NRE15_09050 PF03948 Ribosomal protein L9, C-terminal domain NRE15_09050 PF01281 Ribosomal protein L9, N-terminal domain NRE15_09055 PF01368 DHH family NRE15_09055 PF02272 DHHA1 domain NRE15_09060 PF01084 Ribosomal protein S18 NRE15_09065 PF00436 Single-strand binding protein family NRE15_09070 PF01250 Ribosomal protein S6 NRE15_09075 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_09080 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_09085 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRE15_09090 PF00005 ABC transporter NRE15_09095 PF00696 Amino acid kinase family NRE15_09100 PF00171 Aldehyde dehydrogenase family NRE15_09105 PF00521 DNA gyrase/topoisomerase IV, subunit A NRE15_09105 PF03989 DNA gyrase C-terminal domain, beta-propeller NRE15_09110 PF00204 DNA gyrase B NRE15_09110 PF00986 DNA gyrase B subunit, carboxyl terminus NRE15_09110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_09110 PF01751 Toprim domain NRE15_09115 PF02463 RecF/RecN/SMC N terminal domain NRE15_09125 PF00712 DNA polymerase III beta subunit, N-terminal domain NRE15_09125 PF02767 DNA polymerase III beta subunit, central domain NRE15_09125 PF02768 DNA polymerase III beta subunit, C-terminal domain NRE15_09130 PF00308 Bacterial dnaA protein NRE15_09130 PF08299 Bacterial dnaA protein helix-turn-helix NRE15_09135 PF00468 Ribosomal protein L34 NRE15_09140 PF00825 Ribonuclease P NRE15_09145 PF02096 60Kd inner membrane protein NRE15_09155 PF00367 phosphotransferase system, EIIB NRE15_09155 PF02378 Phosphotransferase system, EIIC NRE15_09160 PF00128 Alpha amylase, catalytic domain NRE15_09160 PF16657 Maltogenic Amylase, C-terminal domain NRE15_09175 PF07702 UTRA domain NRE15_09175 PF00392 Bacterial regulatory proteins, gntR family NRE15_09180 PF00561 alpha/beta hydrolase fold NRE15_09185 PF00571 CBS domain NRE15_09185 PF03471 Transporter associated domain NRE15_09195 PF01926 50S ribosome-binding GTPase NRE15_09195 PF10396 GTP-binding protein TrmE N-terminus NRE15_09195 PF12631 MnmE helical domain NRE15_09200 PF00293 NUDIX domain NRE15_09205 PF13932 GidA associated domain NRE15_09205 PF01134 Glucose inhibited division protein A NRE15_09210 PF03051 Peptidase C1-like family NRE15_09220 PF02527 rRNA small subunit methyltransferase G NRE15_09225 PF13614 AAA domain NRE15_09230 PF02195 ParB-like nuclease domain NRE15_09230 PF17762 HTH domain found in ParB protein NRE15_09235 PF06107 Bacterial protein of unknown function (DUF951) NRE15_09240 PF06071 Protein of unknown function (DUF933) NRE15_09240 PF01926 50S ribosome-binding GTPase NRE15_09250 PF00571 CBS domain NRE15_09250 PF00478 IMP dehydrogenase / GMP reductase domain NRE15_09255 PF00072 Response regulator receiver domain NRE15_09255 PF00486 Transcriptional regulatory protein, C terminal NRE15_09260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_09260 PF00512 His Kinase A (phospho-acceptor) domain NRE15_09265 PF07943 Penicillin-binding protein 5, C-terminal domain NRE15_09265 PF00768 D-alanyl-D-alanine carboxypeptidase NRE15_09270 PF01625 Peptide methionine sulfoxide reductase NRE15_09280 PF02829 3H domain NRE15_09280 PF08279 HTH domain NRE15_09295 PF01522 Polysaccharide deacetylase NRE15_09320 PF07859 alpha/beta hydrolase fold NRE15_09320 PF13472 GDSL-like Lipase/Acylhydrolase family NRE15_09355 PF05043 Mga helix-turn-helix domain NRE15_09355 PF00874 PRD domain NRE15_09355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRE15_09355 PF08279 HTH domain NRE15_09360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRE15_09365 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NRE15_09370 PF02378 Phosphotransferase system, EIIC NRE15_09375 PF00232 Glycosyl hydrolase family 1 NRE15_09380 PF00480 ROK family NRE15_09400 PF17727 CtsR C-terminal dimerization domain NRE15_09400 PF05848 CtsR N-terminal HTH domain NRE15_09405 PF00004 ATPase family associated with various cellular activities (AAA) NRE15_09405 PF07724 AAA domain (Cdc48 subfamily) NRE15_09405 PF17871 AAA lid domain NRE15_09405 PF10431 C-terminal, D2-small domain, of ClpB protein NRE15_09405 PF02861 Clp amino terminal domain, pathogenicity island component NRE15_09415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRE15_09415 PF03466 LysR substrate binding domain NRE15_09420 PF03788 LrgA family NRE15_09425 PF04172 LrgB-like family NRE15_09430 PF01070 FMN-dependent dehydrogenase NRE15_09435 PF13556 PucR C-terminal helix-turn-helix domain NRE15_09440 PF14437 MafB19-like deaminase NRE15_09445 PF04439 Streptomycin adenylyltransferase NRE15_09455 PF03180 NLPA lipoprotein NRE15_09475 PF03167 Uracil DNA glycosylase superfamily NRE15_09480 PF05649 Peptidase family M13 NRE15_09480 PF01431 Peptidase family M13 NRE15_09485 PF00005 ABC transporter NRE15_09495 PF02687 FtsX-like permease family NRE15_09495 PF12704 MacB-like periplasmic core domain NRE15_09500 PF00072 Response regulator receiver domain NRE15_09500 PF00486 Transcriptional regulatory protein, C terminal NRE15_09505 PF00672 HAMP domain NRE15_09505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_09505 PF00512 His Kinase A (phospho-acceptor) domain NRE15_09510 PF00210 Ferritin-like domain NRE15_09515 PF12169 DNA polymerase III subunits gamma and tau domain III NRE15_09520 PF02575 YbaB/EbfC DNA-binding family NRE15_09525 PF02132 RecR protein NRE15_09525 PF13662 Toprim domain NRE15_09530 PF02223 Thymidylate kinase NRE15_09535 PF06153 Cyclic-di-AMP receptor NRE15_09545 PF06156 Initiation control protein YabA NRE15_09550 PF05175 Methyltransferase small domain NRE15_09555 PF01541 GIY-YIG catalytic domain NRE15_09560 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NRE15_09575 PF13673 Acetyltransferase (GNAT) domain NRE15_09575 PF13302 Acetyltransferase (GNAT) domain NRE15_09575 PF03352 Methyladenine glycosylase NRE15_09575 PF00117 Glutamine amidotransferase class-I NRE15_09575 PF00958 GMP synthase C terminal domain NRE15_09585 PF00232 Glycosyl hydrolase family 1 NRE15_09590 PF00356 Bacterial regulatory proteins, lacI family NRE15_09595 PF00480 ROK family NRE15_09600 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_09605 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_09625 PF01741 Large-conductance mechanosensitive channel, MscL NRE15_09630 PF01266 FAD dependent oxidoreductase NRE15_09655 PF00881 Nitroreductase family NRE15_09665 PF12822 ECF transporter, substrate-specific component NRE15_09670 PF00155 Aminotransferase class I and II NRE15_09680 PF09383 NIL domain NRE15_09680 PF00005 ABC transporter NRE15_09685 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_09690 PF00005 ABC transporter NRE15_09690 PF00664 ABC transporter transmembrane region NRE15_09695 PF00664 ABC transporter transmembrane region NRE15_09695 PF00005 ABC transporter NRE15_09700 PF01966 HD domain NRE15_09705 PF03099 Biotin/lipoate A/B protein ligase family NRE15_09715 PF13427 Domain of unknown function (DUF4111) NRE15_09715 PF01909 Nucleotidyltransferase domain NRE15_09720 PF05066 HB1, ASXL, restriction endonuclease HTH domain NRE15_09725 PF06418 CTP synthase N-terminus NRE15_09725 PF00117 Glutamine amidotransferase class-I NRE15_09730 PF01116 Fructose-bisphosphate aldolase class-II NRE15_09745 PF03009 Glycerophosphoryl diester phosphodiesterase family NRE15_09750 PF00005 ABC transporter NRE15_09755 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_09765 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_09775 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NRE15_09780 PF00156 Phosphoribosyl transferase domain NRE15_09785 PF07690 Major Facilitator Superfamily NRE15_09795 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NRE15_09800 PF07497 Rho termination factor, RNA-binding domain NRE15_09800 PF07498 Rho termination factor, N-terminal domain NRE15_09800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRE15_09805 PF04073 Aminoacyl-tRNA editing domain NRE15_09825 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NRE15_09835 PF03600 Citrate transporter NRE15_09845 PF00364 Biotin-requiring enzyme NRE15_09850 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NRE15_09860 PF08218 Citrate lyase ligase C-terminal domain NRE15_09865 PF06857 Malonate decarboxylase delta subunit (MdcD) NRE15_09870 PF03328 HpcH/HpaI aldolase/citrate lyase family NRE15_09875 PF04223 Citrate lyase, alpha subunit (CitF) NRE15_09880 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase NRE15_09885 PF02436 Conserved carboxylase domain NRE15_09885 PF00682 HMGL-like NRE15_09885 PF00364 Biotin-requiring enzyme NRE15_09890 PF01197 Ribosomal protein L31 NRE15_09895 PF08241 Methyltransferase domain NRE15_09900 PF01266 FAD dependent oxidoreductase NRE15_09905 PF05014 Nucleoside 2-deoxyribosyltransferase NRE15_09915 PF02627 Carboxymuconolactone decarboxylase family NRE15_09930 PF00293 NUDIX domain NRE15_09935 PF09285 Elongation factor P, C-terminal NRE15_09935 PF08207 Elongation factor P (EF-P) KOW-like domain NRE15_09935 PF01132 Elongation factor P (EF-P) OB domain NRE15_09940 PF04011 LemA family NRE15_09950 PF07478 D-ala D-ala ligase C-terminus NRE15_09950 PF01820 D-ala D-ala ligase N-terminus NRE15_09955 PF01225 Mur ligase family, catalytic domain NRE15_09955 PF02875 Mur ligase family, glutamate ligase domain NRE15_09955 PF08245 Mur ligase middle domain NRE15_09960 PF00270 DEAD/DEAH box helicase NRE15_09960 PF00271 Helicase conserved C-terminal domain NRE15_09965 PF01648 4'-phosphopantetheinyl transferase superfamily NRE15_09970 PF00842 Alanine racemase, C-terminal domain NRE15_09970 PF01168 Alanine racemase, N-terminal domain NRE15_09975 PF00753 Metallo-beta-lactamase superfamily NRE15_09985 PF01595 Cyclin M transmembrane N-terminal domain NRE15_09985 PF00571 CBS domain NRE15_09985 PF03471 Transporter associated domain NRE15_09990 PF01596 O-methyltransferase NRE15_10005 PF00072 Response regulator receiver domain NRE15_10005 PF00486 Transcriptional regulatory protein, C terminal NRE15_10010 PF00672 HAMP domain NRE15_10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_10010 PF00512 His Kinase A (phospho-acceptor) domain NRE15_10010 PF13426 PAS domain NRE15_10025 PF00005 ABC transporter NRE15_10035 PF00072 Response regulator receiver domain NRE15_10035 PF00486 Transcriptional regulatory protein, C terminal NRE15_10040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_10050 PF00753 Metallo-beta-lactamase superfamily NRE15_10055 PF13180 PDZ domain NRE15_10065 PF02080 TrkA-C domain NRE15_10065 PF02254 TrkA-N domain NRE15_10070 PF02386 Cation transport protein NRE15_10075 PF02386 Cation transport protein NRE15_10085 PF00367 phosphotransferase system, EIIB NRE15_10085 PF02378 Phosphotransferase system, EIIC NRE15_10085 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRE15_10090 PF00232 Glycosyl hydrolase family 1 NRE15_10100 PF02590 Predicted SPOUT methyltransferase NRE15_10105 PF13411 MerR HTH family regulatory protein NRE15_10110 PF00403 Heavy-metal-associated domain NRE15_10110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRE15_10110 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRE15_10125 PF02796 Helix-turn-helix domain of resolvase NRE15_10125 PF00665 Integrase core domain NRE15_10130 PF01695 IstB-like ATP binding protein NRE15_10135 PF01695 IstB-like ATP binding protein NRE15_10160 PF02796 Helix-turn-helix domain of resolvase NRE15_10160 PF00239 Resolvase, N terminal domain NRE15_10190 PF04002 RadC-like JAB domain NRE15_10195 PF12161 HsdM N-terminal domain NRE15_10195 PF02384 N-6 DNA Methylase NRE15_10220 PF07731 Multicopper oxidase NRE15_10220 PF07732 Multicopper oxidase NRE15_10245 PF07859 alpha/beta hydrolase fold NRE15_10255 PF03965 Penicillinase repressor NRE15_10265 PF00403 Heavy-metal-associated domain NRE15_10275 PF05191 Adenylate kinase, active site lid NRE15_10280 PF01790 Prolipoprotein diacylglyceryl transferase NRE15_10300 PF00248 Aldo/keto reductase family NRE15_10305 PF01709 Transcriptional regulator NRE15_10320 PF00909 Ammonium Transporter Family NRE15_10320 PF00672 HAMP domain NRE15_10345 PF00392 Bacterial regulatory proteins, gntR family NRE15_10345 PF07702 UTRA domain NRE15_10350 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRE15_10350 PF00367 phosphotransferase system, EIIB NRE15_10350 PF02378 Phosphotransferase system, EIIC NRE15_10355 PF00232 Glycosyl hydrolase family 1 NRE15_10360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRE15_10370 PF12697 Alpha/beta hydrolase family NRE15_10380 PF08220 DeoR-like helix-turn-helix domain NRE15_10380 PF00455 DeoR C terminal sensor domain NRE15_10385 PF00294 pfkB family carbohydrate kinase NRE15_10390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRE15_10390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRE15_10400 PF00970 Oxidoreductase FAD-binding domain NRE15_10400 PF00111 2Fe-2S iron-sulfur cluster binding domain NRE15_10400 PF00175 Oxidoreductase NAD-binding domain NRE15_10415 PF01784 NIF3 (NGG1p interacting factor 3) NRE15_10420 PF05378 Hydantoinase/oxoprolinase N-terminal region NRE15_10420 PF01968 Hydantoinase/oxoprolinase NRE15_10425 PF02538 Hydantoinase B/oxoprolinase NRE15_10440 PF08240 Alcohol dehydrogenase GroES-like domain NRE15_10440 PF00107 Zinc-binding dehydrogenase NRE15_10450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRE15_10455 PF00232 Glycosyl hydrolase family 1 NRE15_10460 PF00936 BMC domain NRE15_10465 PF10662 Ethanolamine utilisation - propanediol utilisation NRE15_10470 PF01923 Cobalamin adenosyltransferase NRE15_10475 PF00465 Iron-containing alcohol dehydrogenase NRE15_10480 PF00936 BMC domain NRE15_10485 PF03861 ANTAR domain NRE15_10485 PF00072 Response regulator receiver domain NRE15_10490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_10490 PF12282 Signal transduction histidine kinase NRE15_10490 PF07568 Histidine kinase NRE15_10495 PF06277 Ethanolamine utilisation protein EutA NRE15_10500 PF06751 Ethanolamine ammonia lyase large subunit (EutB) NRE15_10505 PF05985 Ethanolamine ammonia-lyase light chain (EutC) NRE15_10510 PF00936 BMC domain NRE15_10515 PF00936 BMC domain NRE15_10515 PF16365 Ethanolamine utilization protein EutK C-terminus NRE15_10520 PF00171 Aldehyde dehydrogenase family NRE15_10520 PF00465 Iron-containing alcohol dehydrogenase NRE15_10525 PF00936 BMC domain NRE15_10535 PF06130 Phosphate propanoyltransferase NRE15_10545 PF03319 Ethanolamine utilisation protein EutN/carboxysome NRE15_10550 PF04346 Ethanolamine utilisation protein, EutH NRE15_10555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRE15_10565 PF00300 Histidine phosphatase superfamily (branch 1) NRE15_10575 PF01032 FecCD transport family NRE15_10580 PF00005 ABC transporter NRE15_10585 PF00155 Aminotransferase class I and II NRE15_10590 PF00288 GHMP kinases N terminal domain NRE15_10595 PF03186 CobD/Cbib protein NRE15_10600 PF07685 CobB/CobQ-like glutamine amidotransferase domain NRE15_10615 PF02654 Cobalamin-5-phosphate synthase NRE15_10620 PF00753 Metallo-beta-lactamase superfamily NRE15_10625 PF02384 N-6 DNA Methylase NRE15_10630 PF01420 Type I restriction modification DNA specificity domain NRE15_10635 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NRE15_10635 PF18766 SWI2/SNF2 ATPase NRE15_10635 PF11867 Domain of unknown function (DUF3387) NRE15_10645 PF00356 Bacterial regulatory proteins, lacI family NRE15_10650 PF00005 ABC transporter NRE15_10650 PF17912 MalK OB fold domain NRE15_10660 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_10665 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_10680 PF00890 FAD binding domain NRE15_10680 PF04205 FMN-binding domain NRE15_10685 PF08220 DeoR-like helix-turn-helix domain NRE15_10685 PF00455 DeoR C terminal sensor domain NRE15_10695 PF08402 TOBE domain NRE15_10695 PF00005 ABC transporter NRE15_10700 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_10725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRE15_10730 PF13556 PucR C-terminal helix-turn-helix domain NRE15_10730 PF17853 GGDEF-like domain NRE15_10730 PF06018 CodY GAF-like domain NRE15_10735 PF08669 Glycine cleavage T-protein C-terminal barrel domain NRE15_10735 PF01571 Aminomethyltransferase folate-binding domain NRE15_10750 PF03992 Antibiotic biosynthesis monooxygenase NRE15_10760 PF08402 TOBE domain NRE15_10760 PF00005 ABC transporter NRE15_10775 PF01975 Survival protein SurE NRE15_10780 PF12706 Beta-lactamase superfamily domain NRE15_10780 PF00753 Metallo-beta-lactamase superfamily NRE15_10785 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_10790 PF08402 TOBE domain NRE15_10790 PF00005 ABC transporter NRE15_10810 PF00291 Pyridoxal-phosphate dependent enzyme NRE15_10815 PF00132 Bacterial transferase hexapeptide (six repeats) NRE15_10830 PF08534 Redoxin NRE15_10840 PF01869 BadF/BadG/BcrA/BcrD ATPase family NRE15_10850 PF13419 Haloacid dehalogenase-like hydrolase NRE15_10855 PF02080 TrkA-C domain NRE15_10855 PF02254 TrkA-N domain NRE15_10860 PF02386 Cation transport protein NRE15_10870 PF07676 WD40-like Beta Propeller Repeat NRE15_10870 PF00326 Prolyl oligopeptidase family NRE15_10875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRE15_10880 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_10885 PF12911 N-terminal TM domain of oligopeptide transport permease C NRE15_10885 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_10890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRE15_10890 PF00005 ABC transporter NRE15_10895 PF00005 ABC transporter NRE15_10895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRE15_10905 PF07687 Peptidase dimerisation domain NRE15_10905 PF01546 Peptidase family M20/M25/M40 NRE15_10915 PF01418 Helix-turn-helix domain, rpiR family NRE15_10915 PF01380 SIS domain NRE15_10920 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NRE15_10920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NRE15_10925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRE15_10925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRE15_10930 PF00465 Iron-containing alcohol dehydrogenase NRE15_10940 PF03613 PTS system mannose/fructose/sorbose family IID component NRE15_10945 PF03610 PTS system fructose IIA component NRE15_10945 PF03830 PTS system sorbose subfamily IIB component NRE15_10955 PF03610 PTS system fructose IIA component NRE15_10955 PF03830 PTS system sorbose subfamily IIB component NRE15_10960 PF13419 Haloacid dehalogenase-like hydrolase NRE15_10965 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NRE15_10965 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NRE15_10980 PF02770 Acyl-CoA dehydrogenase, middle domain NRE15_10980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRE15_10980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRE15_10985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRE15_10985 PF03466 LysR substrate binding domain NRE15_10990 PF02803 Thiolase, C-terminal domain NRE15_10990 PF00108 Thiolase, N-terminal domain NRE15_11000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NRE15_11000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NRE15_11005 PF00378 Enoyl-CoA hydratase/isomerase NRE15_11010 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NRE15_11010 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NRE15_11040 PF02733 Dak1 domain NRE15_11045 PF02733 Dak1 domain NRE15_11050 PF02734 DAK2 domain NRE15_11055 PF03610 PTS system fructose IIA component NRE15_11060 PF00230 Major intrinsic protein NRE15_11065 PF00293 NUDIX domain NRE15_11090 PF00356 Bacterial regulatory proteins, lacI family NRE15_11095 PF00860 Permease family NRE15_11100 PF00005 ABC transporter NRE15_11115 PF02653 Branched-chain amino acid transport system / permease component NRE15_11120 PF00005 ABC transporter NRE15_11125 PF13407 Periplasmic binding protein domain NRE15_11130 PF12833 Helix-turn-helix domain NRE15_11130 PF00072 Response regulator receiver domain NRE15_11135 PF06580 Histidine kinase NRE15_11135 PF00672 HAMP domain NRE15_11135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_11135 PF02743 Cache domain NRE15_11140 PF13407 Periplasmic binding protein domain NRE15_11145 PF03050 Transposase IS66 family NRE15_11145 PF13817 IS66 C-terminal element NRE15_11145 PF13005 zinc-finger binding domain of transposase IS66 NRE15_11145 PF13007 Transposase C of IS166 homeodomain NRE15_11160 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRE15_11220 PF13350 Tyrosine phosphatase family NRE15_11235 PF00005 ABC transporter NRE15_11235 PF08402 TOBE domain NRE15_11270 PF08402 TOBE domain NRE15_11270 PF00005 ABC transporter NRE15_11275 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_11290 PF13302 Acetyltransferase (GNAT) domain NRE15_11315 PF00005 ABC transporter NRE15_11315 PF17912 MalK OB fold domain NRE15_11315 PF03459 TOBE domain NRE15_11320 PF13416 Bacterial extracellular solute-binding protein NRE15_11325 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_11330 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_11335 PF01168 Alanine racemase, N-terminal domain NRE15_11340 PF00171 Aldehyde dehydrogenase family NRE15_11345 PF00465 Iron-containing alcohol dehydrogenase NRE15_11350 PF03466 LysR substrate binding domain NRE15_11350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRE15_11365 PF02798 Glutathione S-transferase, N-terminal domain NRE15_11370 PF00245 Alkaline phosphatase NRE15_11390 PF00403 Heavy-metal-associated domain NRE15_11395 PF00403 Heavy-metal-associated domain NRE15_11405 PF13520 Amino acid permease NRE15_11410 PF01168 Alanine racemase, N-terminal domain NRE15_11425 PF00291 Pyridoxal-phosphate dependent enzyme NRE15_11430 PF16552 D-ornithine 4,5-aminomutase alpha-subunit NRE15_11435 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase NRE15_11435 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit NRE15_11435 PF02310 B12 binding domain NRE15_11440 PF13941 MutL protein NRE15_11445 PF03466 LysR substrate binding domain NRE15_11445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRE15_11465 PF01923 Cobalamin adenosyltransferase NRE15_11485 PF00230 Major intrinsic protein NRE15_11490 PF01022 Bacterial regulatory protein, arsR family NRE15_11495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRE15_11500 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_11505 PF12911 N-terminal TM domain of oligopeptide transport permease C NRE15_11505 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_11510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRE15_11510 PF00005 ABC transporter NRE15_11515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRE15_11515 PF00005 ABC transporter NRE15_11535 PF00480 ROK family NRE15_11540 PF13416 Bacterial extracellular solute-binding protein NRE15_11545 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_11550 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_11555 PF08244 Glycosyl hydrolases family 32 C terminal NRE15_11555 PF00251 Glycosyl hydrolases family 32 N-terminal domain NRE15_11560 PF00480 ROK family NRE15_11565 PF00874 PRD domain NRE15_11565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRE15_11565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRE15_11565 PF05043 Mga helix-turn-helix domain NRE15_11565 PF08279 HTH domain NRE15_11570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRE15_11575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRE15_11580 PF03611 PTS system sugar-specific permease component NRE15_11585 PF13580 SIS domain NRE15_11595 PF00293 NUDIX domain NRE15_11600 PF07729 FCD domain NRE15_11600 PF00392 Bacterial regulatory proteins, gntR family NRE15_11605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NRE15_11605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NRE15_11620 PF00465 Iron-containing alcohol dehydrogenase NRE15_11630 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NRE15_11630 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NRE15_11635 PF00325 Bacterial regulatory proteins, crp family NRE15_11635 PF04198 Putative sugar-binding domain NRE15_11640 PF00005 ABC transporter NRE15_11645 PF02653 Branched-chain amino acid transport system / permease component NRE15_11650 PF02653 Branched-chain amino acid transport system / permease component NRE15_11655 PF13407 Periplasmic binding protein domain NRE15_11660 PF01791 DeoC/LacD family aldolase NRE15_11670 PF04556 DpnII restriction endonuclease NRE15_11675 PF02086 D12 class N6 adenine-specific DNA methyltransferase NRE15_11680 PF01555 DNA methylase NRE15_11690 PF00232 Glycosyl hydrolase family 1 NRE15_11695 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRE15_11695 PF00367 phosphotransferase system, EIIB NRE15_11695 PF02378 Phosphotransferase system, EIIC NRE15_11700 PF13610 DDE domain NRE15_11710 PF13673 Acetyltransferase (GNAT) domain NRE15_11740 PF03123 CAT RNA binding domain NRE15_11740 PF00874 PRD domain NRE15_11745 PF00367 phosphotransferase system, EIIB NRE15_11745 PF02378 Phosphotransferase system, EIIC NRE15_11745 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRE15_11750 PF00232 Glycosyl hydrolase family 1 NRE15_11760 PF17802 Prealbumin-like fold domain NRE15_11760 PF05738 Cna protein B-type domain NRE15_11760 PF05737 Collagen binding domain NRE15_11785 PF00375 Sodium:dicarboxylate symporter family NRE15_11790 PF00464 Serine hydroxymethyltransferase NRE15_11795 PF12822 ECF transporter, substrate-specific component NRE15_11800 PF01268 Formate--tetrahydrofolate ligase NRE15_11805 PF01812 5-formyltetrahydrofolate cyclo-ligase family NRE15_11815 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NRE15_11815 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NRE15_11820 PF08245 Mur ligase middle domain NRE15_11820 PF02875 Mur ligase family, glutamate ligase domain NRE15_11825 PF01226 Formate/nitrite transporter NRE15_11830 PF01571 Aminomethyltransferase folate-binding domain NRE15_11830 PF08669 Glycine cleavage T-protein C-terminal barrel domain NRE15_11835 PF12241 Trans-2-enoyl-CoA reductase catalytic region NRE15_11835 PF07055 Enoyl reductase FAD binding domain NRE15_11835 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NRE15_11840 PF01569 PAP2 superfamily NRE15_11870 PF11728 Putative aromatic acid exporter C-terminal domain NRE15_11870 PF06081 Aromatic acid exporter family member 1 NRE15_11875 PF06480 FtsH Extracellular NRE15_11875 PF01434 Peptidase family M41 NRE15_11875 PF00004 ATPase family associated with various cellular activities (AAA) NRE15_11875 PF17862 AAA+ lid domain NRE15_11910 PF01136 Peptidase family U32 NRE15_11910 PF16325 Peptidase family U32 C-terminal domain NRE15_11925 PF13610 DDE domain NRE15_11930 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NRE15_11930 PF01476 LysM domain NRE15_11935 PF05525 Branched-chain amino acid transport protein NRE15_11940 PF00753 Metallo-beta-lactamase superfamily NRE15_11940 PF16123 Hydroxyacylglutathione hydrolase C-terminus NRE15_11945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRE15_11950 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_11955 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_11955 PF12911 N-terminal TM domain of oligopeptide transport permease C NRE15_11960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRE15_11960 PF00005 ABC transporter NRE15_11965 PF00005 ABC transporter NRE15_11965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRE15_11980 PF00005 ABC transporter NRE15_12015 PF00196 Bacterial regulatory proteins, luxR family NRE15_12015 PF00072 Response regulator receiver domain NRE15_12025 PF04012 PspA/IM30 family NRE15_12030 PF00690 Cation transporter/ATPase, N-terminus NRE15_12030 PF00689 Cation transporting ATPase, C-terminus NRE15_12040 PF04525 LURP-one-related NRE15_12045 PF10502 Signal peptidase, peptidase S26 NRE15_12050 PF00582 Universal stress protein family NRE15_12055 PF03129 Anticodon binding domain NRE15_12055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NRE15_12055 PF09180 Prolyl-tRNA synthetase, C-terminal NRE15_12060 PF03061 Thioesterase superfamily NRE15_12065 PF03601 Conserved hypothetical protein 698 NRE15_12070 PF10509 Galactokinase galactose-binding signature NRE15_12070 PF08544 GHMP kinases C terminal NRE15_12070 PF00288 GHMP kinases N terminal domain NRE15_12075 PF00814 Glycoprotease family NRE15_12085 PF00583 Acetyltransferase (GNAT) family NRE15_12090 PF00814 Glycoprotease family NRE15_12105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRE15_12105 PF03466 LysR substrate binding domain NRE15_12110 PF02803 Thiolase, C-terminal domain NRE15_12110 PF00108 Thiolase, N-terminal domain NRE15_12115 PF01144 Coenzyme A transferase NRE15_12120 PF01144 Coenzyme A transferase NRE15_12135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NRE15_12135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NRE15_12145 PF01496 V-type ATPase 116kDa subunit family NRE15_12150 PF00137 ATP synthase subunit C NRE15_12160 PF01992 ATP synthase (C/AC39) subunit NRE15_12165 PF01990 ATP synthase (F/14-kDa) subunit NRE15_12170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRE15_12170 PF02874 ATP synthase alpha/beta family, beta-barrel domain NRE15_12170 PF16886 ATPsynthase alpha/beta subunit N-term extension NRE15_12175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRE15_12175 PF02874 ATP synthase alpha/beta family, beta-barrel domain NRE15_12180 PF01813 ATP synthase subunit D NRE15_12190 PF00005 ABC transporter NRE15_12195 PF02687 FtsX-like permease family NRE15_12195 PF12704 MacB-like periplasmic core domain NRE15_12200 PF00144 Beta-lactamase NRE15_12215 PF00106 short chain dehydrogenase NRE15_12220 PF03099 Biotin/lipoate A/B protein ligase family NRE15_12220 PF10437 Bacterial lipoate protein ligase C-terminus NRE15_12225 PF00703 Glycosyl hydrolases family 2 NRE15_12225 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NRE15_12225 PF02837 Glycosyl hydrolases family 2, sugar binding domain NRE15_12230 PF03477 ATP cone domain NRE15_12230 PF13597 Anaerobic ribonucleoside-triphosphate reductase NRE15_12250 PF07687 Peptidase dimerisation domain NRE15_12250 PF01546 Peptidase family M20/M25/M40 NRE15_12260 PF12848 ABC transporter NRE15_12260 PF16326 ABC transporter C-terminal domain NRE15_12260 PF00005 ABC transporter NRE15_12265 PF06971 Putative DNA-binding protein N-terminus NRE15_12265 PF02629 CoA binding domain NRE15_12275 PF00166 Chaperonin 10 Kd subunit NRE15_12280 PF00118 TCP-1/cpn60 chaperonin family NRE15_12285 PF02719 Polysaccharide biosynthesis protein NRE15_12290 PF03816 Cell envelope-related transcriptional attenuator domain NRE15_12300 PF07739 TipAS antibiotic-recognition domain NRE15_12300 PF13411 MerR HTH family regulatory protein NRE15_12320 PF00005 ABC transporter NRE15_12320 PF12558 ATP-binding cassette cobalt transporter NRE15_12325 PF07155 ECF-type riboflavin transporter, S component NRE15_12335 PF04191 Phospholipid methyltransferase NRE15_12340 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain NRE15_12340 PF01113 Dihydrodipicolinate reductase, N-terminus NRE15_12345 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NRE15_12345 PF01476 LysM domain NRE15_12355 PF01066 CDP-alcohol phosphatidyltransferase NRE15_12375 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_12380 PF00005 ABC transporter NRE15_12385 PF02645 Uncharacterised protein, DegV family COG1307 NRE15_12390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NRE15_12390 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NRE15_12390 PF02142 MGS-like domain NRE15_12400 PF00132 Bacterial transferase hexapeptide (six repeats) NRE15_12400 PF12464 Maltose acetyltransferase NRE15_12405 PF02142 MGS-like domain NRE15_12460 PF06177 QueT transporter NRE15_12465 PF02441 Flavoprotein NRE15_12465 PF04127 DNA / pantothenate metabolism flavoprotein NRE15_12480 PF13005 zinc-finger binding domain of transposase IS66 NRE15_12480 PF03050 Transposase IS66 family NRE15_12480 PF13007 Transposase C of IS166 homeodomain NRE15_12480 PF13817 IS66 C-terminal element NRE15_12485 PF00005 ABC transporter NRE15_12500 PF05343 M42 glutamyl aminopeptidase NRE15_12505 PF12706 Beta-lactamase superfamily domain NRE15_12510 PF00171 Aldehyde dehydrogenase family NRE15_12525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRE15_12530 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_12535 PF12911 N-terminal TM domain of oligopeptide transport permease C NRE15_12535 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_12540 PF00005 ABC transporter NRE15_12540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRE15_12545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRE15_12545 PF00005 ABC transporter NRE15_12550 PF18419 ATP-grasp-like domain NRE15_12550 PF02655 ATP-grasp domain NRE15_12550 PF04262 Glutamate-cysteine ligase NRE15_12640 PF13416 Bacterial extracellular solute-binding protein NRE15_12645 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_12650 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_12655 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NRE15_12655 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NRE15_12665 PF09827 CRISPR associated protein Cas2 NRE15_12670 PF10040 CRISPR-associated endoribonuclease Cas6 NRE15_12675 PF01966 HD domain NRE15_12675 PF18211 Csm1 subunit domain B NRE15_12680 PF03750 Csm2 Type III-A NRE15_12685 PF03787 RAMP superfamily NRE15_12690 PF17953 CRISPR Csm4 C-terminal domain NRE15_12695 PF03787 RAMP superfamily NRE15_12700 PF09659 CRISPR-associated protein (Cas_Csm6) NRE15_12710 PF00266 Aminotransferase class-V NRE15_12715 PF01842 ACT domain NRE15_12715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRE15_12715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRE15_12740 PF01470 Pyroglutamyl peptidase NRE15_12755 PF07687 Peptidase dimerisation domain NRE15_12755 PF01546 Peptidase family M20/M25/M40 NRE15_12760 PF07687 Peptidase dimerisation domain NRE15_12760 PF01546 Peptidase family M20/M25/M40 NRE15_12770 PF00005 ABC transporter NRE15_12770 PF17912 MalK OB fold domain NRE15_12770 PF03459 TOBE domain NRE15_12775 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_12785 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_12815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRE15_12820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRE15_12825 PF03611 PTS system sugar-specific permease component NRE15_12830 PF00701 Dihydrodipicolinate synthetase family NRE15_12835 PF00356 Bacterial regulatory proteins, lacI family NRE15_12840 PF01380 SIS domain NRE15_12840 PF00571 CBS domain NRE15_12845 PF00294 pfkB family carbohydrate kinase NRE15_12850 PF05025 RbsD / FucU transport protein family NRE15_12855 PF00005 ABC transporter NRE15_12860 PF02653 Branched-chain amino acid transport system / permease component NRE15_12870 PF13416 Bacterial extracellular solute-binding protein NRE15_12875 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_12880 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_12905 PF00156 Phosphoribosyl transferase domain NRE15_12905 PF05139 Erythromycin esterase NRE15_12910 PF00874 PRD domain NRE15_12910 PF03123 CAT RNA binding domain NRE15_12915 PF00367 phosphotransferase system, EIIB NRE15_12915 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRE15_12915 PF02378 Phosphotransferase system, EIIC NRE15_12920 PF00232 Glycosyl hydrolase family 1 NRE15_12935 PF00005 ABC transporter NRE15_12935 PF17912 MalK OB fold domain NRE15_12935 PF03459 TOBE domain NRE15_12940 PF00455 DeoR C terminal sensor domain NRE15_12940 PF08220 DeoR-like helix-turn-helix domain NRE15_12945 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_12950 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_12965 PF00072 Response regulator receiver domain NRE15_12965 PF00486 Transcriptional regulatory protein, C terminal NRE15_12970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_12975 PF00005 ABC transporter NRE15_12985 PF00155 Aminotransferase class I and II NRE15_12990 PF01546 Peptidase family M20/M25/M40 NRE15_12990 PF07687 Peptidase dimerisation domain NRE15_12995 PF03606 C4-dicarboxylate anaerobic carrier NRE15_13000 PF01042 Endoribonuclease L-PSP NRE15_13020 PF00376 MerR family regulatory protein NRE15_13020 PF09278 MerR, DNA binding NRE15_13030 PF00690 Cation transporter/ATPase, N-terminus NRE15_13030 PF00689 Cation transporting ATPase, C-terminus NRE15_13035 PF04203 Sortase domain NRE15_13040 PF03649 Uncharacterised protein family (UPF0014) NRE15_13045 PF00005 ABC transporter NRE15_13050 PF00005 ABC transporter NRE15_13050 PF08402 TOBE domain NRE15_13055 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_13060 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_13070 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NRE15_13080 PF02210 Laminin G domain NRE15_13080 PF02368 Bacterial Ig-like domain (group 2) NRE15_13080 PF08244 Glycosyl hydrolases family 32 C terminal NRE15_13080 PF00251 Glycosyl hydrolases family 32 N-terminal domain NRE15_13085 PF07729 FCD domain NRE15_13085 PF00392 Bacterial regulatory proteins, gntR family NRE15_13090 PF01081 KDPG and KHG aldolase NRE15_13095 PF02614 Glucuronate isomerase NRE15_13100 PF03786 D-mannonate dehydratase (UxuA) NRE15_13105 PF00106 short chain dehydrogenase NRE15_13115 PF01293 Phosphoenolpyruvate carboxykinase NRE15_13125 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain NRE15_13125 PF17385 Lacto-N-biose phosphorylase central domain NRE15_13125 PF17386 Lacto-N-biose phosphorylase C-terminal domain NRE15_13130 PF00480 ROK family NRE15_13145 PF17785 PUA-like domain NRE15_13145 PF10672 S-adenosylmethionine-dependent methyltransferase NRE15_13150 PF00005 ABC transporter NRE15_13170 PF13457 GW (Gly-Tryp) dipeptide domain NRE15_13170 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NRE15_13175 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NRE15_13175 PF02222 ATP-grasp domain NRE15_13180 PF13361 UvrD-like helicase C-terminal domain NRE15_13180 PF00580 UvrD/REP helicase N-terminal domain NRE15_13185 PF03120 NAD-dependent DNA ligase OB-fold domain NRE15_13185 PF01653 NAD-dependent DNA ligase adenylation domain NRE15_13185 PF00533 BRCA1 C Terminus (BRCT) domain NRE15_13185 PF12826 Helix-hairpin-helix motif NRE15_13185 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NRE15_13190 PF07537 CamS sex pheromone cAM373 precursor NRE15_13195 PF02686 Glu-tRNAGln amidotransferase C subunit NRE15_13200 PF01425 Amidase NRE15_13205 PF02934 GatB/GatE catalytic domain NRE15_13205 PF02637 GatB domain NRE15_13215 PF01541 GIY-YIG catalytic domain NRE15_13215 PF02151 UvrB/uvrC motif NRE15_13215 PF08459 UvrC Helix-hairpin-helix N-terminal NRE15_13225 PF02308 MgtC family NRE15_13235 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NRE15_13245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRE15_13250 PF00270 DEAD/DEAH box helicase NRE15_13250 PF00271 Helicase conserved C-terminal domain NRE15_13255 PF13439 Glycosyltransferase Family 4 NRE15_13255 PF00534 Glycosyl transferases group 1 NRE15_13260 PF00480 ROK family NRE15_13270 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRE15_13270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRE15_13285 PF00557 Metallopeptidase family M24 NRE15_13290 PF00483 Nucleotidyl transferase NRE15_13295 PF00534 Glycosyl transferases group 1 NRE15_13295 PF13439 Glycosyltransferase Family 4 NRE15_13305 PF02073 Thermophilic metalloprotease (M29) NRE15_13310 PF00258 Flavodoxin NRE15_13315 PF01554 MatE NRE15_13320 PF01370 NAD dependent epimerase/dehydratase family NRE15_13330 PF03816 Cell envelope-related transcriptional attenuator domain NRE15_13335 PF13439 Glycosyltransferase Family 4 NRE15_13335 PF00534 Glycosyl transferases group 1 NRE15_13345 PF04932 O-Antigen ligase NRE15_13355 PF00535 Glycosyl transferase family 2 NRE15_13380 PF02631 RecX family NRE15_13385 PF14815 NUDIX domain NRE15_13385 PF00633 Helix-hairpin-helix motif NRE15_13385 PF00730 HhH-GPD superfamily base excision DNA repair protein NRE15_13390 PF00005 ABC transporter NRE15_13390 PF00664 ABC transporter transmembrane region NRE15_13395 PF00005 ABC transporter NRE15_13395 PF00664 ABC transporter transmembrane region NRE15_13400 PF05343 M42 glutamyl aminopeptidase NRE15_13415 PF00232 Glycosyl hydrolase family 1 NRE15_13420 PF00232 Glycosyl hydrolase family 1 NRE15_13425 PF00367 phosphotransferase system, EIIB NRE15_13425 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRE15_13425 PF02378 Phosphotransferase system, EIIC NRE15_13430 PF04167 Protein of unknown function (DUF402) NRE15_13435 PF00128 Alpha amylase, catalytic domain NRE15_13435 PF17999 Pullulanase N1-terminal domain NRE15_13435 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRE15_13440 PF01380 SIS domain NRE15_13445 PF04304 Protein of unknown function (DUF454) NRE15_13450 PF00933 Glycosyl hydrolase family 3 N terminal domain NRE15_13450 PF01915 Glycosyl hydrolase family 3 C-terminal domain NRE15_13450 PF14310 Fibronectin type III-like domain NRE15_13455 PF00356 Bacterial regulatory proteins, lacI family NRE15_13460 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_13465 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_13490 PF00005 ABC transporter NRE15_13500 PF07730 Histidine kinase NRE15_13505 PF00196 Bacterial regulatory proteins, luxR family NRE15_13505 PF00072 Response regulator receiver domain NRE15_13520 PF08367 Peptidase M16C associated NRE15_13520 PF00675 Insulinase (Peptidase family M16) NRE15_13520 PF05193 Peptidase M16 inactive domain NRE15_13530 PF00005 ABC transporter NRE15_13530 PF08402 TOBE domain NRE15_13535 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_13545 PF00459 Inositol monophosphatase family NRE15_13560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRE15_13560 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRE15_13570 PF00248 Aldo/keto reductase family NRE15_13575 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRE15_13580 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_13585 PF00005 ABC transporter NRE15_13590 PF12146 Serine aminopeptidase, S33 NRE15_13595 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NRE15_13600 PF12833 Helix-turn-helix domain NRE15_13600 PF17853 GGDEF-like domain NRE15_13605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NRE15_13605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRE15_13625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRE15_13625 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NRE15_13635 PF00248 Aldo/keto reductase family NRE15_13645 PF03932 CutC family NRE15_13650 PF13416 Bacterial extracellular solute-binding protein NRE15_13655 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_13660 PF00528 Binding-protein-dependent transport system inner membrane component NRE15_13680 PF13007 Transposase C of IS166 homeodomain NRE15_13680 PF13817 IS66 C-terminal element NRE15_13680 PF03050 Transposase IS66 family NRE15_13680 PF13005 zinc-finger binding domain of transposase IS66 NRE15_13695 PF00356 Bacterial regulatory proteins, lacI family NRE15_13700 PF02311 AraC-like ligand binding domain NRE15_13700 PF12833 Helix-turn-helix domain NRE15_13710 PF02664 S-Ribosylhomocysteinase (LuxS) NRE15_13715 PF12833 Helix-turn-helix domain NRE15_13720 PF02903 Alpha amylase, N-terminal ig-like domain NRE15_13720 PF00128 Alpha amylase, catalytic domain NRE15_13725 PF00343 Carbohydrate phosphorylase NRE15_13730 PF02446 4-alpha-glucanotransferase NRE15_13735 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRE15_13735 PF00356 Bacterial regulatory proteins, lacI family NRE15_13755 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NRE15_13765 PF00128 Alpha amylase, catalytic domain NRE15_13765 PF02806 Alpha amylase, C-terminal all-beta domain NRE15_13765 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRE15_13770 PF00483 Nucleotidyl transferase NRE15_13775 PF00483 Nucleotidyl transferase NRE15_13780 PF00534 Glycosyl transferases group 1 NRE15_13780 PF08323 Starch synthase catalytic domain NRE15_13785 PF00343 Carbohydrate phosphorylase NRE15_13790 PF00912 Transglycosylase NRE15_13790 PF00905 Penicillin binding protein transpeptidase domain NRE15_13795 PF06133 Control of competence regulator ComK, YlbF/YmcA NRE15_13800 PF00149 Calcineurin-like phosphoesterase NRE15_13805 PF13514 AAA domain NRE15_13810 PF01336 OB-fold nucleic acid binding domain NRE15_13810 PF01966 HD domain NRE15_13830 PF01230 HIT domain NRE15_13845 PF04205 FMN-binding domain NRE15_13850 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NRE15_13865 PF03812 2-keto-3-deoxygluconate permease NRE15_13870 PF02424 ApbE family NRE15_13880 PF01386 Ribosomal L25p family NRE15_13880 PF14693 Ribosomal protein TL5, C-terminal domain NRE15_13885 PF08331 Domain of unknown function (DUF1730) NRE15_13890 PF00588 SpoU rRNA Methylase family NRE15_13895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NRE15_13895 PF02403 Seryl-tRNA synthetase N-terminal domain NRE15_13905 PF01496 V-type ATPase 116kDa subunit family NRE15_13915 PF03050 Transposase IS66 family NRE15_13915 PF13817 IS66 C-terminal element NRE15_13915 PF13007 Transposase C of IS166 homeodomain NRE15_13915 PF13005 zinc-finger binding domain of transposase IS66 NRE15_13920 PF01496 V-type ATPase 116kDa subunit family NRE15_13925 PF00137 ATP synthase subunit C NRE15_13940 PF01990 ATP synthase (F/14-kDa) subunit NRE15_13945 PF02874 ATP synthase alpha/beta family, beta-barrel domain NRE15_13945 PF16886 ATPsynthase alpha/beta subunit N-term extension NRE15_13945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRE15_13950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRE15_13950 PF02874 ATP synthase alpha/beta family, beta-barrel domain NRE15_13955 PF01813 ATP synthase subunit D NRE15_13960 PF02673 Bacitracin resistance protein BacA NRE15_13965 PF02378 Phosphotransferase system, EIIC NRE15_13965 PF00367 phosphotransferase system, EIIB NRE15_13965 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRE15_13970 PF10282 Lactonase, 7-bladed beta-propeller NRE15_13975 PF01594 AI-2E family transporter NRE15_13985 PF04474 Protein of unknown function (DUF554) NRE15_13990 PF07685 CobB/CobQ-like glutamine amidotransferase domain NRE15_13995 PF08353 Domain of unknown function (DUF1727) NRE15_13995 PF08245 Mur ligase middle domain NRE15_14000 PF02558 Ketopantoate reductase PanE/ApbA NRE15_14000 PF08546 Ketopantoate reductase PanE/ApbA C terminal NRE15_14005 PF00265 Thymidine kinase NRE15_14010 PF00472 RF-1 domain NRE15_14010 PF03462 PCRF domain NRE15_14015 PF05175 Methyltransferase small domain NRE15_14015 PF17827 PrmC N-terminal domain NRE15_14020 PF03481 Putative GTP-binding controlling metal-binding NRE15_14020 PF01300 Telomere recombination NRE15_14025 PF00464 Serine hydroxymethyltransferase NRE15_14035 PF00368 Hydroxymethylglutaryl-coenzyme A reductase NRE15_14040 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal NRE15_14040 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal NRE15_14050 PF03960 ArsC family NRE15_14055 PF00119 ATP synthase A chain NRE15_14060 PF00137 ATP synthase subunit C NRE15_14065 PF00430 ATP synthase B/B' CF(0) NRE15_14070 PF00213 ATP synthase delta (OSCP) subunit NRE15_14075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRE15_14075 PF02874 ATP synthase alpha/beta family, beta-barrel domain NRE15_14075 PF00306 ATP synthase alpha/beta chain, C terminal domain NRE15_14080 PF00231 ATP synthase NRE15_14085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRE15_14085 PF02874 ATP synthase alpha/beta family, beta-barrel domain NRE15_14090 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NRE15_14090 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NRE15_14105 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NRE15_14125 PF02381 MraZ protein, putative antitoxin-like NRE15_14130 PF01795 MraW methylase family NRE15_14140 PF03717 Penicillin-binding Protein dimerisation domain NRE15_14140 PF00905 Penicillin binding protein transpeptidase domain NRE15_14140 PF03793 PASTA domain NRE15_14145 PF01225 Mur ligase family, catalytic domain NRE15_14145 PF02875 Mur ligase family, glutamate ligase domain NRE15_14145 PF08245 Mur ligase middle domain NRE15_14150 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NRE15_14150 PF00953 Glycosyl transferase family 4 NRE15_14155 PF02875 Mur ligase family, glutamate ligase domain NRE15_14155 PF08245 Mur ligase middle domain NRE15_14160 PF03033 Glycosyltransferase family 28 N-terminal domain NRE15_14160 PF04101 Glycosyltransferase family 28 C-terminal domain NRE15_14170 PF11983 Membrane-attachment and polymerisation-promoting switch NRE15_14170 PF02491 SHS2 domain inserted in FTSA NRE15_14175 PF00091 Tubulin/FtsZ family, GTPase domain NRE15_14175 PF12327 FtsZ family, C-terminal domain NRE15_14185 PF17774 Putative RNA-binding domain in YlmH NRE15_14185 PF01479 S4 domain NRE15_14190 PF05103 DivIVA protein NRE15_14195 PF08264 Anticodon-binding domain of tRNA NRE15_14195 PF00133 tRNA synthetases class I (I, L, M and V) NRE15_14195 PF06827 Zinc finger found in FPG and IleRS NRE15_14205 PF05816 Toxic anion resistance protein (TelA) NRE15_14215 PF00293 NUDIX domain NRE15_14225 PF01048 Phosphorylase superfamily NRE15_14230 PF00163 Ribosomal protein S4/S9 N-terminal domain NRE15_14230 PF01479 S4 domain NRE15_14235 PF06160 Septation ring formation regulator, EzrA NRE15_14240 PF00266 Aminotransferase class-V NRE15_14245 PF02926 THUMP domain NRE15_14245 PF02568 Thiamine biosynthesis protein (ThiI) NRE15_14250 PF08534 Redoxin NRE15_14255 PF02146 Sir2 family NRE15_14260 PF00133 tRNA synthetases class I (I, L, M and V) NRE15_14260 PF08264 Anticodon-binding domain of tRNA NRE15_14260 PF10458 Valyl tRNA synthetase tRNA binding arm NRE15_14265 PF02875 Mur ligase family, glutamate ligase domain NRE15_14265 PF08245 Mur ligase middle domain NRE15_14270 PF04002 RadC-like JAB domain NRE15_14275 PF00313 'Cold-shock' DNA-binding domain NRE15_14290 PF04085 rod shape-determining protein MreC NRE15_14300 PF00829 Ribosomal prokaryotic L21 protein NRE15_14310 PF01016 Ribosomal L27 protein NRE15_14315 PF14490 Helix-hairpin-helix containing domain NRE15_14315 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NRE15_14315 PF13538 UvrD-like helicase C-terminal domain NRE15_14320 PF00072 Response regulator receiver domain NRE15_14320 PF04397 LytTr DNA-binding domain NRE15_14325 PF00781 Diacylglycerol kinase catalytic domain NRE15_14330 PF01411 tRNA synthetases class II (A) NRE15_14330 PF02272 DHHA1 domain NRE15_14330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NRE15_14335 PF06135 IreB regulatory phosphoprotein NRE15_14340 PF03652 Holliday junction resolvase NRE15_14345 PF06949 Protein of unknown function (DUF1292) NRE15_14350 PF02618 YceG-like family NRE15_14355 PF00485 Phosphoribulokinase / Uridine kinase family NRE15_14360 PF01272 Transcription elongation factor, GreA/GreB, C-term NRE15_14360 PF03449 Transcription elongation factor, N-terminal NRE15_14370 PF07730 Histidine kinase NRE15_14370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRE15_14375 PF00072 Response regulator receiver domain NRE15_14375 PF00196 Bacterial regulatory proteins, luxR family NRE15_14380 PF01521 Iron-sulphur cluster biosynthesis NRE15_14385 PF01118 Semialdehyde dehydrogenase, NAD binding domain NRE15_14385 PF02774 Semialdehyde dehydrogenase, dimerisation domain NRE15_14390 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NRE15_14390 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NRE15_14395 PF00701 Dihydrodipicolinate synthetase family NRE15_14400 PF05173 Dihydrodipicolinate reductase, C-terminus NRE15_14400 PF01113 Dihydrodipicolinate reductase, N-terminus NRE15_14405 PF00155 Aminotransferase class I and II NRE15_14410 PF01432 Peptidase family M3 NRE15_14410 PF08439 Oligopeptidase F NRE15_14415 PF13472 GDSL-like Lipase/Acylhydrolase family NRE15_14420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRE15_14420 PF03466 LysR substrate binding domain NRE15_14425 PF03553 Na+/H+ antiporter family NRE15_14430 PF00155 Aminotransferase class I and II NRE15_14435 PF07687 Peptidase dimerisation domain NRE15_14435 PF01546 Peptidase family M20/M25/M40 NRE15_14440 PF07687 Peptidase dimerisation domain NRE15_14440 PF01546 Peptidase family M20/M25/M40 NRE15_14450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRE15_14450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRE15_14460 PF03631 Virulence factor BrkB NRE15_14465 PF01098 Cell cycle protein NRE15_14470 PF01597 Glycine cleavage H-protein NRE15_14475 PF07722 Peptidase C26 NRE15_14480 PF06144 DNA polymerase III, delta subunit NRE15_14485 PF01649 Ribosomal protein S20 NRE15_14490 PF00271 Helicase conserved C-terminal domain NRE15_14490 PF04851 Type III restriction enzyme, res subunit NRE15_14490 PF02151 UvrB/uvrC motif NRE15_14490 PF12344 Ultra-violet resistance protein B NRE15_14490 PF17757 UvrB interaction domain NRE15_14495 PF01757 Acyltransferase family NRE15_14500 PF00312 Ribosomal protein S15 NRE15_14505 PF00575 S1 RNA binding domain NRE15_14505 PF01138 3' exoribonuclease family, domain 1 NRE15_14505 PF03725 3' exoribonuclease family, domain 2 NRE15_14505 PF00013 KH domain NRE15_14505 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NRE15_14510 PF00753 Metallo-beta-lactamase superfamily NRE15_14510 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NRE15_14510 PF17770 Ribonuclease J C-terminal domain NRE15_14525 PF00291 Pyridoxal-phosphate dependent enzyme NRE15_14530 PF03816 Cell envelope-related transcriptional attenuator domain NRE15_14535 PF00625 Guanylate kinase NRE15_14540 PF01192 RNA polymerase Rpb6 NRE15_14545 PF04851 Type III restriction enzyme, res subunit NRE15_14545 PF00271 Helicase conserved C-terminal domain NRE15_14545 PF17764 3′ DNA-binding domain (3′BD) NRE15_14545 PF18074 Primosomal protein N C-terminal domain NRE15_14545 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NRE15_14550 PF00551 Formyl transferase NRE15_14550 PF02911 Formyl transferase, C-terminal domain NRE15_14555 PF01189 16S rRNA methyltransferase RsmB/F NRE15_14555 PF01029 NusB family NRE15_14565 PF03793 PASTA domain NRE15_14565 PF00069 Protein kinase domain NRE15_14570 PF03193 RsgA GTPase NRE15_14570 PF16745 RsgA N-terminal domain NRE15_14575 PF00834 Ribulose-phosphate 3 epimerase family NRE15_14580 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain NRE15_14580 PF04263 Thiamin pyrophosphokinase, catalytic domain NRE15_14585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRE15_14590 PF00830 Ribosomal L28 family NRE15_14595 PF03780 Asp23 family, cell envelope-related function NRE15_14600 PF13684 Dihydroxyacetone kinase family NRE15_14600 PF02734 DAK2 domain