locus-tag class description CL176_00005 PF02463 RecF/RecN/SMC N terminal domain CL176_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain CL176_00015 PF02767 DNA polymerase III beta subunit, central domain CL176_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain CL176_00020 PF00308 Bacterial dnaA protein CL176_00020 PF08299 Bacterial dnaA protein helix-turn-helix CL176_00025 PF00468 Ribosomal protein L34 CL176_00030 PF00825 Ribonuclease P CL176_00035 PF02096 60Kd inner membrane protein CL176_00055 PF10396 GTP-binding protein TrmE N-terminus CL176_00055 PF12631 MnmE helical domain CL176_00055 PF01926 50S ribosome-binding GTPase CL176_00060 PF00293 NUDIX domain CL176_00065 PF13932 GidA associated domain CL176_00065 PF01134 Glucose inhibited division protein A CL176_00075 PF07729 FCD domain CL176_00075 PF00392 Bacterial regulatory proteins, gntR family CL176_00090 PF01717 Cobalamin-independent synthase, Catalytic domain CL176_00095 PF02527 rRNA small subunit methyltransferase G CL176_00100 PF13614 AAA domain CL176_00105 PF17762 HTH domain found in ParB protein CL176_00105 PF02195 ParB-like nuclease domain CL176_00110 PF06107 Bacterial protein of unknown function (DUF951) CL176_00115 PF01926 50S ribosome-binding GTPase CL176_00115 PF06071 Protein of unknown function (DUF933) CL176_00125 PF00571 CBS domain CL176_00125 PF00478 IMP dehydrogenase / GMP reductase domain CL176_00130 PF00486 Transcriptional regulatory protein, C terminal CL176_00130 PF00072 Response regulator receiver domain CL176_00135 PF00989 PAS fold CL176_00135 PF00512 His Kinase A (phospho-acceptor) domain CL176_00135 PF00672 HAMP domain CL176_00135 PF18698 Histidine kinase sensor domain CL176_00135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CL176_00140 PF07943 Penicillin-binding protein 5, C-terminal domain CL176_00140 PF00768 D-alanyl-D-alanine carboxypeptidase CL176_00145 PF01625 Peptide methionine sulfoxide reductase CL176_00160 PF06177 QueT transporter CL176_00165 PF01695 IstB-like ATP binding protein CL176_00170 PF00665 Integrase core domain CL176_00185 PF05848 CtsR N-terminal HTH domain CL176_00185 PF17727 CtsR C-terminal dimerization domain CL176_00190 PF00004 ATPase family associated with various cellular activities (AAA) CL176_00190 PF10431 C-terminal, D2-small domain, of ClpB protein CL176_00190 PF02861 Clp amino terminal domain, pathogenicity island component CL176_00190 PF07724 AAA domain (Cdc48 subfamily) CL176_00190 PF17871 AAA lid domain CL176_00200 PF14437 MafB19-like deaminase CL176_00225 PF05649 Peptidase family M13 CL176_00225 PF01431 Peptidase family M13 CL176_00230 PF12169 DNA polymerase III subunits gamma and tau domain III CL176_00235 PF02575 YbaB/EbfC DNA-binding family CL176_00240 PF02132 RecR protein CL176_00240 PF13662 Toprim domain CL176_00245 PF02223 Thymidylate kinase CL176_00250 PF06153 Cyclic-di-AMP receptor CL176_00265 PF05175 Methyltransferase small domain CL176_00270 PF01541 GIY-YIG catalytic domain CL176_00275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CL176_00285 PF03352 Methyladenine glycosylase CL176_00290 PF01741 Large-conductance mechanosensitive channel, MscL CL176_00295 PF01266 FAD dependent oxidoreductase CL176_00300 PF06271 RDD family CL176_00305 PF01343 Peptidase family S49 CL176_00310 PF00056 lactate/malate dehydrogenase, NAD binding domain CL176_00310 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CL176_00315 PF00155 Aminotransferase class I and II CL176_00320 PF09383 NIL domain CL176_00320 PF00005 ABC transporter CL176_00325 PF00528 Binding-protein-dependent transport system inner membrane component CL176_00330 PF00245 Alkaline phosphatase CL176_00345 PF01177 Asp/Glu/Hydantoin racemase CL176_00350 PF03180 NLPA lipoprotein CL176_00355 PF03180 NLPA lipoprotein CL176_00360 PF01966 HD domain CL176_00365 PF03099 Biotin/lipoate A/B protein ligase family CL176_00375 PF05066 HB1, ASXL, restriction endonuclease HTH domain CL176_00380 PF13416 Bacterial extracellular solute-binding protein CL176_00385 PF13416 Bacterial extracellular solute-binding protein CL176_00390 PF00528 Binding-protein-dependent transport system inner membrane component CL176_00395 PF00528 Binding-protein-dependent transport system inner membrane component CL176_00400 PF00005 ABC transporter CL176_00400 PF03459 TOBE domain CL176_00400 PF17912 MalK OB fold domain CL176_00405 PF03009 Glycerophosphoryl diester phosphodiesterase family CL176_00435 PF00005 ABC transporter CL176_00440 PF13416 Bacterial extracellular solute-binding protein CL176_00455 PF00528 Binding-protein-dependent transport system inner membrane component CL176_00460 PF00528 Binding-protein-dependent transport system inner membrane component CL176_00465 PF00005 ABC transporter CL176_00465 PF17912 MalK OB fold domain CL176_00470 PF13416 Bacterial extracellular solute-binding protein CL176_00475 PF01116 Fructose-bisphosphate aldolase class-II CL176_00480 PF02901 Pyruvate formate lyase-like CL176_00480 PF01228 Glycine radical CL176_00485 PF04055 Radical SAM superfamily CL176_00490 PF01053 Cys/Met metabolism PLP-dependent enzyme CL176_00495 PF00155 Aminotransferase class I and II CL176_00505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CL176_00510 PF07498 Rho termination factor, N-terminal domain CL176_00510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CL176_00510 PF07497 Rho termination factor, RNA-binding domain CL176_00515 PF04073 Aminoacyl-tRNA editing domain CL176_00525 PF02424 ApbE family CL176_00530 PF01197 Ribosomal protein L31 CL176_00540 PF01712 Deoxynucleoside kinase CL176_00545 PF00571 CBS domain CL176_00545 PF00005 ABC transporter CL176_00550 PF00528 Binding-protein-dependent transport system inner membrane component CL176_00555 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CL176_00560 PF14537 Cytochrome c3 CL176_00560 PF00890 FAD binding domain CL176_00565 PF01610 Transposase CL176_00565 PF13683 Integrase core domain CL176_00575 PF00107 Zinc-binding dehydrogenase CL176_00575 PF08240 Alcohol dehydrogenase GroES-like domain CL176_00580 PF00155 Aminotransferase class I and II CL176_00585 PF09285 Elongation factor P, C-terminal CL176_00585 PF08207 Elongation factor P (EF-P) KOW-like domain CL176_00585 PF01132 Elongation factor P (EF-P) OB domain CL176_00610 PF03641 Possible lysine decarboxylase CL176_00620 PF04011 LemA family CL176_00630 PF07478 D-ala D-ala ligase C-terminus CL176_00630 PF01820 D-ala D-ala ligase N-terminus CL176_00635 PF01225 Mur ligase family, catalytic domain CL176_00635 PF02875 Mur ligase family, glutamate ligase domain CL176_00635 PF08245 Mur ligase middle domain CL176_00640 PF00270 DEAD/DEAH box helicase CL176_00640 PF00271 Helicase conserved C-terminal domain CL176_00645 PF01648 4'-phosphopantetheinyl transferase superfamily CL176_00650 PF00842 Alanine racemase, C-terminal domain CL176_00650 PF01168 Alanine racemase, N-terminal domain CL176_00655 PF00753 Metallo-beta-lactamase superfamily CL176_00665 PF01595 Cyclin M transmembrane N-terminal domain CL176_00665 PF03471 Transporter associated domain CL176_00665 PF00571 CBS domain CL176_00685 PF00486 Transcriptional regulatory protein, C terminal CL176_00685 PF00072 Response regulator receiver domain CL176_00690 PF13426 PAS domain CL176_00690 PF00512 His Kinase A (phospho-acceptor) domain CL176_00690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CL176_00690 PF00672 HAMP domain CL176_00710 PF00753 Metallo-beta-lactamase superfamily CL176_00715 PF13180 PDZ domain CL176_00725 PF02386 Cation transport protein CL176_00730 PF02590 Predicted SPOUT methyltransferase CL176_00735 PF02798 Glutathione S-transferase, N-terminal domain CL176_00740 PF07859 alpha/beta hydrolase fold CL176_00760 PF07687 Peptidase dimerisation domain CL176_00760 PF01546 Peptidase family M20/M25/M40 CL176_00770 PF10502 Signal peptidase, peptidase S26 CL176_00775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CL176_00775 PF09180 Prolyl-tRNA synthetase, C-terminal CL176_00775 PF03129 Anticodon binding domain CL176_00780 PF03061 Thioesterase superfamily CL176_00785 PF00814 Glycoprotease family CL176_00790 PF00583 Acetyltransferase (GNAT) family CL176_00800 PF00814 Glycoprotease family CL176_00805 PF12848 ABC transporter CL176_00805 PF00005 ABC transporter CL176_00805 PF16326 ABC transporter C-terminal domain CL176_00810 PF00753 Metallo-beta-lactamase superfamily CL176_00815 PF06971 Putative DNA-binding protein N-terminus CL176_00815 PF02629 CoA binding domain CL176_00820 PF00166 Chaperonin 10 Kd subunit CL176_00825 PF00118 TCP-1/cpn60 chaperonin family CL176_00850 PF02110 Hydroxyethylthiazole kinase family CL176_00865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CL176_00865 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CL176_00865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CL176_00885 PF01476 LysM domain CL176_00885 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CL176_00895 PF00572 Ribosomal protein L13 CL176_00900 PF00380 Ribosomal protein S9/S16 CL176_00920 PF01695 IstB-like ATP binding protein CL176_00940 PF02142 MGS-like domain CL176_00940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CL176_00940 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CL176_00955 PF03816 Cell envelope-related transcriptional attenuator domain CL176_00960 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CL176_00960 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CL176_00960 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CL176_00975 PF00857 Isochorismatase family CL176_00985 PF01418 Helix-turn-helix domain, rpiR family CL176_00985 PF01380 SIS domain CL176_00990 PF00232 Glycosyl hydrolase family 1 CL176_01005 PF00005 ABC transporter CL176_01100 PF05343 M42 glutamyl aminopeptidase CL176_01105 PF03099 Biotin/lipoate A/B protein ligase family CL176_01105 PF10437 Bacterial lipoate protein ligase C-terminus CL176_01110 PF01476 LysM domain CL176_01110 PF00877 NlpC/P60 family CL176_01115 PF02655 ATP-grasp domain CL176_01115 PF04262 Glutamate-cysteine ligase CL176_01115 PF18419 ATP-grasp-like domain CL176_01205 PF01610 Transposase CL176_01205 PF13683 Integrase core domain CL176_01210 PF14659 Phage integrase, N-terminal SAM-like domain CL176_01210 PF00589 Phage integrase family CL176_01220 PF01726 LexA DNA binding domain CL176_01220 PF00717 Peptidase S24-like CL176_01235 PF03372 Endonuclease/Exonuclease/phosphatase family CL176_01240 PF03812 2-keto-3-deoxygluconate permease CL176_01250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CL176_01250 PF01872 RibD C-terminal domain CL176_01255 PF00677 Lumazine binding domain CL176_01260 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CL176_01260 PF00925 GTP cyclohydrolase II CL176_01265 PF00885 6,7-dimethyl-8-ribityllumazine synthase CL176_01280 PF00730 HhH-GPD superfamily base excision DNA repair protein CL176_01280 PF00633 Helix-hairpin-helix motif CL176_01280 PF10576 Iron-sulfur binding domain of endonuclease III CL176_01285 PF04703 FaeA-like protein CL176_01285 PF00072 Response regulator receiver domain CL176_01290 PF17203 Single cache domain 3 CL176_01290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CL176_01290 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CL176_01290 PF00989 PAS fold CL176_01300 PF00303 Thymidylate synthase CL176_01305 PF00186 Dihydrofolate reductase CL176_01320 PF01695 IstB-like ATP binding protein CL176_01325 PF00764 Arginosuccinate synthase CL176_01335 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) CL176_01340 PF00890 FAD binding domain CL176_01340 PF04205 FMN-binding domain CL176_01360 PF02899 Phage integrase, N-terminal SAM-like domain CL176_01360 PF00589 Phage integrase family CL176_01395 PF00665 Integrase core domain CL176_01395 PF13936 Helix-turn-helix domain CL176_01415 PF01726 LexA DNA binding domain CL176_01415 PF00717 Peptidase S24-like CL176_01420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CL176_01425 PF06580 Histidine kinase CL176_01425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CL176_01425 PF13492 GAF domain CL176_01425 PF07694 5TMR of 5TMR-LYT CL176_01430 PF04397 LytTr DNA-binding domain CL176_01430 PF00072 Response regulator receiver domain CL176_01435 PF03788 LrgA family CL176_01440 PF04172 LrgB-like family CL176_01460 PF10672 S-adenosylmethionine-dependent methyltransferase CL176_01460 PF17785 PUA-like domain CL176_01465 PF00005 ABC transporter CL176_01475 PF01527 Transposase CL176_01475 PF13276 HTH-like domain CL176_01475 PF00665 Integrase core domain CL176_01495 PF13091 PLD-like domain CL176_01510 PF13457 GW (Gly-Tryp) dipeptide domain CL176_01510 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CL176_01515 PF02222 ATP-grasp domain CL176_01515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CL176_01515 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CL176_01520 PF13361 UvrD-like helicase C-terminal domain CL176_01520 PF00580 UvrD/REP helicase N-terminal domain CL176_01525 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CL176_01525 PF12826 Helix-hairpin-helix motif CL176_01525 PF00533 BRCA1 C Terminus (BRCT) domain CL176_01525 PF01653 NAD-dependent DNA ligase adenylation domain CL176_01525 PF03120 NAD-dependent DNA ligase OB-fold domain CL176_01530 PF07537 CamS sex pheromone cAM373 precursor CL176_01535 PF02686 Glu-tRNAGln amidotransferase C subunit CL176_01540 PF01425 Amidase CL176_01545 PF02637 GatB domain CL176_01545 PF02934 GatB/GatE catalytic domain CL176_01550 PF00156 Phosphoribosyl transferase domain CL176_01550 PF13537 Glutamine amidotransferase domain CL176_01555 PF00586 AIR synthase related protein, N-terminal domain CL176_01555 PF02769 AIR synthase related protein, C-terminal domain CL176_01560 PF00551 Formyl transferase CL176_01565 PF01808 AICARFT/IMPCHase bienzyme CL176_01565 PF02142 MGS-like domain CL176_01570 PF02843 Phosphoribosylglycinamide synthetase, C domain CL176_01570 PF02844 Phosphoribosylglycinamide synthetase, N domain CL176_01570 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CL176_01575 PF00731 AIR carboxylase CL176_01580 PF02222 ATP-grasp domain CL176_01580 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CL176_01585 PF01259 SAICAR synthetase CL176_01590 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CL176_01590 PF02769 AIR synthase related protein, C-terminal domain CL176_01590 PF00586 AIR synthase related protein, N-terminal domain CL176_01600 PF00696 Amino acid kinase family CL176_01605 PF00117 Glutamine amidotransferase class-I CL176_01605 PF00958 GMP synthase C terminal domain CL176_01605 PF02540 NAD synthase CL176_01610 PF08459 UvrC Helix-hairpin-helix N-terminal CL176_01610 PF01541 GIY-YIG catalytic domain CL176_01610 PF02151 UvrB/uvrC motif CL176_01625 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CL176_01625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CL176_01635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CL176_01635 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL176_01640 PF04226 Transglycosylase associated protein CL176_01650 PF00557 Metallopeptidase family M24 CL176_01660 PF00534 Glycosyl transferases group 1 CL176_01660 PF13439 Glycosyltransferase Family 4 CL176_01670 PF02073 Thermophilic metalloprotease (M29) CL176_01675 PF00258 Flavodoxin CL176_01680 PF16363 GDP-mannose 4,6 dehydratase CL176_01690 PF03816 Cell envelope-related transcriptional attenuator domain CL176_01695 PF13439 Glycosyltransferase Family 4 CL176_01695 PF00534 Glycosyl transferases group 1 CL176_01715 PF00535 Glycosyl transferase family 2 CL176_01720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CL176_01720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CL176_01740 PF02631 RecX family CL176_01745 PF14815 NUDIX domain CL176_01745 PF00730 HhH-GPD superfamily base excision DNA repair protein CL176_01745 PF00633 Helix-hairpin-helix motif CL176_01750 PF00005 ABC transporter CL176_01750 PF00664 ABC transporter transmembrane region CL176_01755 PF00005 ABC transporter CL176_01755 PF00664 ABC transporter transmembrane region CL176_01760 PF08000 Bacterial PH domain CL176_01765 PF04167 Protein of unknown function (DUF402) CL176_01770 PF00128 Alpha amylase, catalytic domain CL176_01770 PF17999 Pullulanase N1-terminal domain CL176_01770 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CL176_01775 PF00108 Thiolase, N-terminal domain CL176_01775 PF02803 Thiolase, C-terminal domain CL176_01780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CL176_01785 PF00528 Binding-protein-dependent transport system inner membrane component CL176_01790 PF12911 N-terminal TM domain of oligopeptide transport permease C CL176_01790 PF00528 Binding-protein-dependent transport system inner membrane component CL176_01795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CL176_01795 PF00005 ABC transporter CL176_01800 PF00005 ABC transporter CL176_01800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CL176_01805 PF05343 M42 glutamyl aminopeptidase CL176_01810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CL176_01820 PF01695 IstB-like ATP binding protein CL176_01835 PF00365 Phosphofructokinase CL176_01840 PF02779 Transketolase, pyrimidine binding domain CL176_01840 PF02780 Transketolase, C-terminal domain CL176_01840 PF00456 Transketolase, thiamine diphosphate binding domain CL176_01845 PF04198 Putative sugar-binding domain CL176_01845 PF13936 Helix-turn-helix domain CL176_01850 PF09364 XFP N-terminal domain CL176_01850 PF09363 XFP C-terminal domain CL176_01850 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CL176_01855 PF03606 C4-dicarboxylate anaerobic carrier CL176_01860 PF01979 Amidohydrolase family CL176_01865 PF02733 Dak1 domain CL176_01870 PF02734 DAK2 domain CL176_01875 PF03610 PTS system fructose IIA component CL176_01880 PF03180 NLPA lipoprotein CL176_01885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CL176_01890 PF03611 PTS system sugar-specific permease component CL176_01900 PF08220 DeoR-like helix-turn-helix domain CL176_01900 PF00455 DeoR C terminal sensor domain CL176_01910 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CL176_01920 PF00106 short chain dehydrogenase CL176_01925 PF02837 Glycosyl hydrolases family 2, sugar binding domain CL176_01925 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CL176_01925 PF00703 Glycosyl hydrolases family 2 CL176_01930 PF00356 Bacterial regulatory proteins, lacI family CL176_01935 PF00294 pfkB family carbohydrate kinase CL176_01940 PF03812 2-keto-3-deoxygluconate permease CL176_01945 PF03786 D-mannonate dehydratase (UxuA) CL176_01950 PF01081 KDPG and KHG aldolase CL176_01960 PF13419 Haloacid dehalogenase-like hydrolase CL176_01965 PF01380 SIS domain CL176_01965 PF01418 Helix-turn-helix domain, rpiR family CL176_01970 PF03609 PTS system sorbose-specific iic component CL176_01975 PF03613 PTS system mannose/fructose/sorbose family IID component CL176_01980 PF03610 PTS system fructose IIA component CL176_01980 PF03830 PTS system sorbose subfamily IIB component CL176_01985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CL176_01985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CL176_01990 PF03610 PTS system fructose IIA component CL176_01990 PF03830 PTS system sorbose subfamily IIB component CL176_01995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CL176_01995 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CL176_02000 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CL176_02005 PF01261 Xylose isomerase-like TIM barrel CL176_02010 PF00596 Class II Aldolase and Adducin N-terminal domain CL176_02015 PF02502 Ribose/Galactose Isomerase CL176_02020 PF00356 Bacterial regulatory proteins, lacI family CL176_02025 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CL176_02025 PF13457 GW (Gly-Tryp) dipeptide domain CL176_02100 PF00318 Ribosomal protein S2 CL176_02100 PF07498 Rho termination factor, N-terminal domain CL176_02135 PF04466 Phage terminase large subunit CL176_02135 PF17288 Terminase RNAseH like domain CL176_02160 PF00436 Single-strand binding protein family CL176_02185 PF03837 RecT family CL176_02195 PF09588 YqaJ-like viral recombinase domain CL176_02280 PF00239 Resolvase, N terminal domain CL176_02280 PF02796 Helix-turn-helix domain of resolvase CL176_02285 PF00294 pfkB family carbohydrate kinase CL176_02290 PF05025 RbsD / FucU transport protein family CL176_02295 PF00005 ABC transporter CL176_02300 PF02653 Branched-chain amino acid transport system / permease component CL176_02305 PF13407 Periplasmic binding protein domain CL176_02320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CL176_02320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CL176_02325 PF00367 phosphotransferase system, EIIB CL176_02325 PF02378 Phosphotransferase system, EIIC CL176_02355 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CL176_02360 PF00106 short chain dehydrogenase CL176_02365 PF08279 HTH domain CL176_02365 PF05043 Mga helix-turn-helix domain CL176_02365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CL176_02365 PF00874 PRD domain CL176_02375 PF03608 PTS system enzyme II sorbitol-specific factor CL176_02380 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CL176_02380 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CL176_02385 PF03829 PTS system glucitol/sorbitol-specific IIA component CL176_02390 PF13419 Haloacid dehalogenase-like hydrolase CL176_02395 PF13419 Haloacid dehalogenase-like hydrolase CL176_02400 PF00923 Transaldolase/Fructose-6-phosphate aldolase CL176_02410 PF00455 DeoR C terminal sensor domain CL176_02410 PF08220 DeoR-like helix-turn-helix domain CL176_02420 PF01695 IstB-like ATP binding protein CL176_02450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CL176_02455 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CL176_02460 PF03611 PTS system sugar-specific permease component CL176_02465 PF08240 Alcohol dehydrogenase GroES-like domain CL176_02465 PF00107 Zinc-binding dehydrogenase CL176_02470 PF01791 DeoC/LacD family aldolase CL176_02475 PF00294 pfkB family carbohydrate kinase CL176_02500 PF01695 IstB-like ATP binding protein CL176_02510 PF00665 Integrase core domain CL176_02510 PF13276 HTH-like domain CL176_02510 PF13333 Integrase core domain CL176_02520 PF14537 Cytochrome c3 CL176_02520 PF00890 FAD binding domain CL176_02525 PF00890 FAD binding domain CL176_02525 PF03358 NADPH-dependent FMN reductase CL176_02525 PF04205 FMN-binding domain CL176_02530 PF13936 Helix-turn-helix domain CL176_02540 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CL176_02540 PF00874 PRD domain CL176_02540 PF05043 Mga helix-turn-helix domain CL176_02540 PF08279 HTH domain CL176_02545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CL176_02550 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CL176_02555 PF03611 PTS system sugar-specific permease component CL176_02560 PF02780 Transketolase, C-terminal domain CL176_02560 PF02779 Transketolase, pyrimidine binding domain CL176_02560 PF00456 Transketolase, thiamine diphosphate binding domain CL176_02575 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CL176_02575 PF00367 phosphotransferase system, EIIB CL176_02575 PF02378 Phosphotransferase system, EIIC CL176_02590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CL176_02600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CL176_02605 PF05043 Mga helix-turn-helix domain CL176_02605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CL176_02605 PF08279 HTH domain CL176_02605 PF00874 PRD domain CL176_02610 PF10282 Lactonase, 7-bladed beta-propeller CL176_02615 PF13936 Helix-turn-helix domain CL176_02625 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CL176_02625 PF14572 Phosphoribosyl synthetase-associated domain CL176_02660 PF00465 Iron-containing alcohol dehydrogenase CL176_02665 PF08220 DeoR-like helix-turn-helix domain CL176_02665 PF00455 DeoR C terminal sensor domain CL176_02670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CL176_02670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CL176_02675 PF01261 Xylose isomerase-like TIM barrel CL176_02680 PF00474 Sodium:solute symporter family CL176_02685 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CL176_02685 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CL176_02695 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CL176_02700 PF04962 KduI/IolB family CL176_02705 PF00294 pfkB family carbohydrate kinase CL176_02710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CL176_02710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CL176_02710 PF00205 Thiamine pyrophosphate enzyme, central domain CL176_02715 PF01116 Fructose-bisphosphate aldolase class-II CL176_02720 PF00171 Aldehyde dehydrogenase family CL176_02730 PF01496 V-type ATPase 116kDa subunit family CL176_02735 PF00137 ATP synthase subunit C CL176_02745 PF01992 ATP synthase (C/AC39) subunit CL176_02750 PF01990 ATP synthase (F/14-kDa) subunit CL176_02755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CL176_02755 PF02874 ATP synthase alpha/beta family, beta-barrel domain CL176_02755 PF16886 ATPsynthase alpha/beta subunit N-term extension CL176_02760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CL176_02760 PF02874 ATP synthase alpha/beta family, beta-barrel domain CL176_02765 PF01813 ATP synthase subunit D CL176_02790 PF14552 Tautomerase enzyme CL176_02795 PF01695 IstB-like ATP binding protein CL176_02815 PF02615 Malate/L-lactate dehydrogenase CL176_02820 PF06545 Protein of unknown function (DUF1116) CL176_02825 PF11392 Protein of unknown function (DUF2877) CL176_02830 PF00696 Amino acid kinase family CL176_02835 PF07883 Cupin domain CL176_02835 PF05899 Protein of unknown function (DUF861) CL176_02840 PF17853 GGDEF-like domain CL176_02840 PF13556 PucR C-terminal helix-turn-helix domain CL176_02840 PF07905 Purine catabolism regulatory protein-like family CL176_02845 PF00266 Aminotransferase class-V CL176_02850 PF01546 Peptidase family M20/M25/M40 CL176_02855 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CL176_02860 PF01979 Amidohydrolase family CL176_02875 PF00528 Binding-protein-dependent transport system inner membrane component CL176_02880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CL176_02880 PF00005 ABC transporter CL176_02890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CL176_02890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CL176_02910 PF00149 Calcineurin-like phosphoesterase CL176_02915 PF01063 Amino-transferase class IV CL176_02925 PF00690 Cation transporter/ATPase, N-terminus CL176_02925 PF00689 Cation transporting ATPase, C-terminus CL176_02935 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CL176_02940 PF01297 Zinc-uptake complex component A periplasmic CL176_02940 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CL176_02950 PF00253 Ribosomal protein S14p/S29e CL176_02955 PF00939 Sodium:sulfate symporter transmembrane region CL176_02960 PF07883 Cupin domain CL176_02965 PF00694 Aconitase C-terminal domain CL176_02965 PF00330 Aconitase family (aconitate hydratase) CL176_02970 PF00285 Citrate synthase, C-terminal domain CL176_02975 PF00180 Isocitrate/isopropylmalate dehydrogenase CL176_02975 PF18324 Hypothetical protein TT1725 CL176_02980 PF16123 Hydroxyacylglutathione hydrolase C-terminus CL176_02980 PF00753 Metallo-beta-lactamase superfamily CL176_02985 PF00005 ABC transporter CL176_02990 PF01032 FecCD transport family CL176_03000 PF00665 Integrase core domain CL176_03000 PF13333 Integrase core domain CL176_03005 PF01695 IstB-like ATP binding protein CL176_03015 PF13276 HTH-like domain CL176_03015 PF00665 Integrase core domain CL176_03015 PF13333 Integrase core domain CL176_03030 PF00497 Bacterial extracellular solute-binding proteins, family 3 CL176_03035 PF07687 Peptidase dimerisation domain CL176_03035 PF01546 Peptidase family M20/M25/M40 CL176_03045 PF01207 Dihydrouridine synthase (Dus) CL176_03050 PF04205 FMN-binding domain CL176_03050 PF01794 Ferric reductase like transmembrane component CL176_03055 PF00111 2Fe-2S iron-sulfur cluster binding domain CL176_03055 PF00175 Oxidoreductase NAD-binding domain CL176_03055 PF00970 Oxidoreductase FAD-binding domain CL176_03065 PF00296 Luciferase-like monooxygenase CL176_03085 PF00005 ABC transporter CL176_03090 PF13409 Glutathione S-transferase, N-terminal domain CL176_03095 PF12241 Trans-2-enoyl-CoA reductase catalytic region CL176_03095 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CL176_03095 PF07055 Enoyl reductase FAD binding domain CL176_03105 PF00326 Prolyl oligopeptidase family CL176_03110 PF01168 Alanine racemase, N-terminal domain CL176_03145 PF06081 Aromatic acid exporter family member 1 CL176_03150 PF01475 Ferric uptake regulator family CL176_03155 PF00579 tRNA synthetases class I (W and Y) CL176_03160 PF03960 ArsC family CL176_03165 PF05389 Negative regulator of genetic competence (MecA) CL176_03175 PF01432 Peptidase family M3 CL176_03175 PF08439 Oligopeptidase F CL176_03180 PF02390 Putative methyltransferase CL176_03195 PF05343 M42 glutamyl aminopeptidase CL176_03200 PF14794 Domain of unknown function (DUF4479) CL176_03200 PF01588 Putative tRNA binding domain CL176_03210 PF02875 Mur ligase family, glutamate ligase domain CL176_03210 PF08245 Mur ligase middle domain CL176_03210 PF01225 Mur ligase family, catalytic domain CL176_03215 PF01367 5'-3' exonuclease, C-terminal SAM fold CL176_03215 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CL176_03215 PF00476 DNA polymerase family A CL176_03220 PF06827 Zinc finger found in FPG and IleRS CL176_03220 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CL176_03220 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CL176_03225 PF01121 Dephospho-CoA kinase CL176_03230 PF03477 ATP cone domain CL176_03240 PF07319 Primosomal protein DnaI N-terminus CL176_03240 PF01695 IstB-like ATP binding protein CL176_03245 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CL176_03245 PF03129 Anticodon binding domain CL176_03245 PF02824 TGS domain CL176_03245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CL176_03255 PF00768 D-alanyl-D-alanine carboxypeptidase CL176_03255 PF07943 Penicillin-binding protein 5, C-terminal domain CL176_03260 PF03167 Uracil DNA glycosylase superfamily CL176_03265 PF00881 Nitroreductase family CL176_03275 PF00664 ABC transporter transmembrane region CL176_03275 PF00005 ABC transporter CL176_03280 PF00005 ABC transporter CL176_03280 PF00664 ABC transporter transmembrane region CL176_03285 PF00665 Integrase core domain CL176_03285 PF13936 Helix-turn-helix domain CL176_03295 PF00005 ABC transporter CL176_03300 PF00950 ABC 3 transport family CL176_03305 PF00950 ABC 3 transport family CL176_03310 PF01297 Zinc-uptake complex component A periplasmic CL176_03320 PF00707 Translation initiation factor IF-3, C-terminal domain CL176_03320 PF05198 Translation initiation factor IF-3, N-terminal domain CL176_03325 PF01632 Ribosomal protein L35 CL176_03330 PF00453 Ribosomal protein L20 CL176_03335 PF13439 Glycosyltransferase Family 4 CL176_03345 PF01513 ATP-NAD kinase CL176_03350 PF00849 RNA pseudouridylate synthase CL176_03355 PF03448 MgtE intracellular N domain CL176_03355 PF01769 Divalent cation transporter CL176_03355 PF00571 CBS domain CL176_03360 PF13673 Acetyltransferase (GNAT) domain CL176_03380 PF16658 Class II release factor RF3, C-terminal domain CL176_03380 PF00009 Elongation factor Tu GTP binding domain CL176_03380 PF03144 Elongation factor Tu domain 2 CL176_03385 PF00381 PTS HPr component phosphorylation site CL176_03390 PF02896 PEP-utilising enzyme, TIM barrel domain CL176_03390 PF00391 PEP-utilising enzyme, mobile domain CL176_03390 PF05524 PEP-utilising enzyme, N-terminal CL176_03405 PF01926 50S ribosome-binding GTPase CL176_03410 PF01985 CRS1 / YhbY (CRM) domain CL176_03415 PF01467 Cytidylyltransferase-like CL176_03420 PF01966 HD domain CL176_03430 PF01209 ubiE/COQ5 methyltransferase family CL176_03435 PF05636 HIGH Nucleotidyl Transferase CL176_03450 PF01783 Ribosomal L32p protein family CL176_03460 PF00574 Clp protease CL176_03465 PF04198 Putative sugar-binding domain CL176_03470 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CL176_03470 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CL176_03475 PF00162 Phosphoglycerate kinase CL176_03480 PF00121 Triosephosphate isomerase CL176_03485 PF01676 Metalloenzyme superfamily CL176_03485 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CL176_03490 PF03952 Enolase, N-terminal domain CL176_03490 PF00113 Enolase, C-terminal TIM barrel domain CL176_03495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CL176_03495 PF00205 Thiamine pyrophosphate enzyme, central domain CL176_03495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CL176_03500 PF01476 LysM domain CL176_03500 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CL176_03510 PF03840 Preprotein translocase SecG subunit CL176_03520 PF17876 Cold shock domain CL176_03520 PF00575 S1 RNA binding domain CL176_03520 PF08206 Ribonuclease B OB domain CL176_03520 PF00773 RNB domain CL176_03525 PF01668 SmpB protein CL176_03530 PF03812 2-keto-3-deoxygluconate permease CL176_03535 PF17770 Ribonuclease J C-terminal domain CL176_03535 PF00753 Metallo-beta-lactamase superfamily CL176_03535 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CL176_03545 PF00437 Type II/IV secretion system protein CL176_03550 PF00482 Type II secretion system (T2SS), protein F CL176_03575 PF00557 Metallopeptidase family M24 CL176_03575 PF01321 Creatinase/Prolidase N-terminal domain CL176_03585 PF01029 NusB family CL176_03595 PF13742 OB-fold nucleic acid binding domain CL176_03595 PF02601 Exonuclease VII, large subunit CL176_03600 PF02609 Exonuclease VII small subunit CL176_03605 PF00348 Polyprenyl synthetase CL176_03610 PF01479 S4 domain CL176_03610 PF01728 FtsJ-like methyltransferase CL176_03615 PF13476 AAA domain CL176_03630 PF01327 Polypeptide deformylase CL176_03640 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CL176_03640 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CL176_03650 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CL176_03650 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CL176_03655 PF00550 Phosphopantetheine attachment site CL176_03660 PF03060 Nitronate monooxygenase CL176_03665 PF00698 Acyl transferase domain CL176_03675 PF00109 Beta-ketoacyl synthase, N-terminal domain CL176_03675 PF02801 Beta-ketoacyl synthase, C-terminal domain CL176_03680 PF00364 Biotin-requiring enzyme CL176_03685 PF07977 FabA-like domain CL176_03690 PF02785 Biotin carboxylase C-terminal domain CL176_03690 PF00289 Biotin carboxylase, N-terminal domain CL176_03690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CL176_03695 PF01039 Carboxyl transferase domain CL176_03700 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CL176_03705 PF00676 Dehydrogenase E1 component CL176_03710 PF02780 Transketolase, C-terminal domain CL176_03710 PF02779 Transketolase, pyrimidine binding domain CL176_03715 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CL176_03715 PF02817 e3 binding domain CL176_03715 PF00364 Biotin-requiring enzyme CL176_03720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CL176_03720 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL176_03725 PF00119 ATP synthase A chain CL176_03730 PF00137 ATP synthase subunit C CL176_03745 PF00306 ATP synthase alpha/beta chain, C terminal domain CL176_03745 PF02874 ATP synthase alpha/beta family, beta-barrel domain CL176_03745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CL176_03750 PF00231 ATP synthase CL176_03755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CL176_03755 PF02874 ATP synthase alpha/beta family, beta-barrel domain CL176_03760 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CL176_03760 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CL176_03770 PF05256 Uncharacterised protein family (UPF0223) CL176_03775 PF00459 Inositol monophosphatase family CL176_03785 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CL176_03785 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CL176_03790 PF01610 Transposase CL176_03790 PF13683 Integrase core domain CL176_03795 PF01098 Cell cycle protein CL176_03800 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CL176_03810 PF01467 Cytidylyltransferase-like CL176_03830 PF00005 ABC transporter CL176_03835 PF00497 Bacterial extracellular solute-binding proteins, family 3 CL176_03840 PF00528 Binding-protein-dependent transport system inner membrane component CL176_03845 PF00528 Binding-protein-dependent transport system inner membrane component CL176_03850 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CL176_03850 PF00367 phosphotransferase system, EIIB CL176_03850 PF02378 Phosphotransferase system, EIIC CL176_03855 PF01047 MarR family CL176_03860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CL176_03865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CL176_03870 PF01613 Flavin reductase like domain CL176_03885 PF00462 Glutaredoxin CL176_03890 PF07972 NrdI Flavodoxin like CL176_03895 PF08343 Ribonucleotide reductase N-terminal CL176_03895 PF02867 Ribonucleotide reductase, barrel domain CL176_03895 PF00317 Ribonucleotide reductase, all-alpha domain CL176_03900 PF00268 Ribonucleotide reductase, small chain CL176_03910 PF02645 Uncharacterised protein, DegV family COG1307 CL176_03925 PF01610 Transposase CL176_03925 PF13683 Integrase core domain CL176_03935 PF02872 5'-nucleotidase, C-terminal domain CL176_03940 PF06265 Protein of unknown function (DUF1027) CL176_03945 PF13344 Haloacid dehalogenase-like hydrolase CL176_03955 PF04608 Phosphatidylglycerophosphatase A CL176_03960 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL176_03965 PF02681 Divergent PAP2 family CL176_03970 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CL176_03975 PF00013 KH domain CL176_03975 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CL176_03975 PF01138 3' exoribonuclease family, domain 1 CL176_03975 PF03725 3' exoribonuclease family, domain 2 CL176_03975 PF00575 S1 RNA binding domain CL176_03980 PF00342 Phosphoglucose isomerase CL176_04100 PF05746 DALR anticodon binding domain CL176_04100 PF00750 tRNA synthetases class I (R) CL176_04100 PF03485 Arginyl tRNA synthetase N terminal domain CL176_04205 PF01032 FecCD transport family CL176_04210 PF01032 FecCD transport family CL176_04215 PF00005 ABC transporter CL176_04225 PF00665 Integrase core domain CL176_04225 PF13333 Integrase core domain CL176_04225 PF13276 HTH-like domain CL176_04240 PF04542 Sigma-70 region 2 CL176_04275 PF08280 M protein trans-acting positive regulator (MGA) HTH domain CL176_04275 PF05043 Mga helix-turn-helix domain CL176_04275 PF08270 M protein trans-acting positive regulator (MGA) PRD domain CL176_04295 PF03050 Transposase IS66 family CL176_04295 PF13007 Transposase C of IS166 homeodomain CL176_04295 PF13817 IS66 C-terminal element CL176_04295 PF13005 zinc-finger binding domain of transposase IS66 CL176_04310 PF00438 S-adenosylmethionine synthetase, N-terminal domain CL176_04310 PF02772 S-adenosylmethionine synthetase, central domain CL176_04310 PF02773 S-adenosylmethionine synthetase, C-terminal domain CL176_04315 PF06962 Putative rRNA methylase CL176_04320 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CL176_04320 PF01476 LysM domain CL176_04325 PF08264 Anticodon-binding domain of tRNA CL176_04325 PF00133 tRNA synthetases class I (I, L, M and V) CL176_04325 PF09334 tRNA synthetases class I (M) CL176_04325 PF13603 Leucyl-tRNA synthetase, Domain 2 CL176_04330 PF14667 Polysaccharide biosynthesis C-terminal domain CL176_04330 PF01943 Polysaccharide biosynthesis protein CL176_04335 PF01479 S4 domain CL176_04335 PF00849 RNA pseudouridylate synthase CL176_04360 PF02719 Polysaccharide biosynthesis protein CL176_04365 PF01370 NAD dependent epimerase/dehydratase family CL176_04370 PF13807 G-rich domain on putative tyrosine kinase CL176_04370 PF02706 Chain length determinant protein CL176_04375 PF13614 AAA domain CL176_04380 PF02397 Bacterial sugar transferase CL176_04385 PF00535 Glycosyl transferase family 2 CL176_04390 PF13439 Glycosyltransferase Family 4 CL176_04390 PF00534 Glycosyl transferases group 1 CL176_04395 PF00535 Glycosyl transferase family 2 CL176_04405 PF00534 Glycosyl transferases group 1 CL176_04405 PF13439 Glycosyltransferase Family 4 CL176_04410 PF00535 Glycosyl transferase family 2 CL176_04435 PF00535 Glycosyl transferase family 2 CL176_04450 PF00270 DEAD/DEAH box helicase CL176_04450 PF18395 Cas3 C-terminal domain CL176_04450 PF18019 HD domain CL176_04465 PF09344 CT1975-like protein CL176_04470 PF09704 CRISPR-associated protein (Cas_Cas5) CL176_04480 PF01867 CRISPR associated protein Cas1 CL176_04510 PF13333 Integrase core domain CL176_04510 PF13276 HTH-like domain CL176_04510 PF00665 Integrase core domain CL176_04520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CL176_04525 PF01380 SIS domain CL176_04530 PF13627 Prokaryotic lipoprotein-attachment site CL176_04530 PF00080 Copper/zinc superoxide dismutase (SODC) CL176_04545 PF13416 Bacterial extracellular solute-binding protein CL176_04550 PF00528 Binding-protein-dependent transport system inner membrane component CL176_04555 PF00528 Binding-protein-dependent transport system inner membrane component CL176_04560 PF00005 ABC transporter CL176_04560 PF08402 TOBE domain CL176_04575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CL176_04585 PF01546 Peptidase family M20/M25/M40 CL176_04590 PF00588 SpoU rRNA Methylase family CL176_04590 PF08032 RNA 2'-O ribose methyltransferase substrate binding CL176_04600 PF01409 tRNA synthetases class II core domain (F) CL176_04600 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CL176_04605 PF03484 tRNA synthetase B5 domain CL176_04605 PF03147 Ferredoxin-fold anticodon binding domain CL176_04605 PF03483 B3/4 domain CL176_04605 PF01588 Putative tRNA binding domain CL176_04605 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CL176_04630 PF01351 Ribonuclease HII CL176_04630 PF11858 Domain of unknown function (DUF3378) CL176_04645 PF08270 M protein trans-acting positive regulator (MGA) PRD domain CL176_04645 PF05043 Mga helix-turn-helix domain CL176_04645 PF08280 M protein trans-acting positive regulator (MGA) HTH domain CL176_04650 PF01713 Smr domain CL176_04650 PF00488 MutS domain V CL176_04655 PF00085 Thioredoxin CL176_04660 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CL176_04660 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CL176_04675 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain CL176_04675 PF01113 Dihydrodipicolinate reductase, N-terminus CL176_04680 PF01177 Asp/Glu/Hydantoin racemase CL176_04685 PF01725 Ham1 family CL176_04695 PF01610 Transposase CL176_04695 PF13683 Integrase core domain CL176_04700 PF00924 Mechanosensitive ion channel CL176_04715 PF00356 Bacterial regulatory proteins, lacI family CL176_04720 PF13458 Periplasmic binding protein CL176_04725 PF00133 tRNA synthetases class I (I, L, M and V) CL176_04725 PF10458 Valyl tRNA synthetase tRNA binding arm CL176_04725 PF08264 Anticodon-binding domain of tRNA CL176_04730 PF04002 RadC-like JAB domain CL176_04735 PF00313 'Cold-shock' DNA-binding domain CL176_04745 PF03883 Peroxide stress protein YaaA CL176_04750 PF00483 Nucleotidyl transferase CL176_04755 PF00483 Nucleotidyl transferase CL176_04760 PF02423 Ornithine cyclodeaminase/mu-crystallin family CL176_04765 PF00005 ABC transporter CL176_04770 PF03649 Uncharacterised protein family (UPF0014) CL176_04775 PF05649 Peptidase family M13 CL176_04775 PF01431 Peptidase family M13 CL176_04780 PF05649 Peptidase family M13 CL176_04780 PF01431 Peptidase family M13 CL176_04790 PF05649 Peptidase family M13 CL176_04790 PF01431 Peptidase family M13 CL176_04800 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CL176_04800 PF02378 Phosphotransferase system, EIIC CL176_04800 PF00367 phosphotransferase system, EIIB CL176_04805 PF00171 Aldehyde dehydrogenase family CL176_04820 PF04085 rod shape-determining protein MreC CL176_04830 PF00497 Bacterial extracellular solute-binding proteins, family 3 CL176_04835 PF01546 Peptidase family M20/M25/M40 CL176_04840 PF02386 Cation transport protein CL176_04850 PF00890 FAD binding domain CL176_04850 PF04205 FMN-binding domain CL176_04850 PF03358 NADPH-dependent FMN reductase CL176_04855 PF04205 FMN-binding domain CL176_04855 PF03358 NADPH-dependent FMN reductase CL176_04855 PF00890 FAD binding domain CL176_04865 PF04012 PspA/IM30 family CL176_04885 PF00871 Acetokinase family CL176_04890 PF00300 Histidine phosphatase superfamily (branch 1) CL176_04900 PF02146 Sir2 family CL176_04905 PF02645 Uncharacterised protein, DegV family COG1307 CL176_04910 PF00367 phosphotransferase system, EIIB CL176_04910 PF02378 Phosphotransferase system, EIIC CL176_04915 PF16657 Maltogenic Amylase, C-terminal domain CL176_04915 PF00128 Alpha amylase, catalytic domain CL176_04920 PF07724 AAA domain (Cdc48 subfamily) CL176_04920 PF10431 C-terminal, D2-small domain, of ClpB protein CL176_04920 PF00004 ATPase family associated with various cellular activities (AAA) CL176_04920 PF02861 Clp amino terminal domain, pathogenicity island component CL176_04920 PF17871 AAA lid domain CL176_04925 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL176_04925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CL176_04930 PF00676 Dehydrogenase E1 component CL176_04935 PF02779 Transketolase, pyrimidine binding domain CL176_04935 PF02780 Transketolase, C-terminal domain CL176_04940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CL176_04940 PF00364 Biotin-requiring enzyme CL176_04940 PF02817 e3 binding domain CL176_04945 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CL176_04955 PF04650 YSIRK type signal peptide CL176_04955 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region CL176_04955 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region CL176_04955 PF07501 G5 domain CL176_04965 PF01522 Polysaccharide deacetylase CL176_04970 PF00035 Double-stranded RNA binding motif CL176_04970 PF14622 Ribonuclease-III-like CL176_04975 PF06470 SMC proteins Flexible Hinge Domain CL176_04975 PF02463 RecF/RecN/SMC N terminal domain CL176_04985 PF00448 SRP54-type protein, GTPase domain CL176_04985 PF02881 SRP54-type protein, helical bundle domain CL176_04990 PF00830 Ribosomal L28 family CL176_04995 PF03780 Asp23 family, cell envelope-related function CL176_05000 PF13684 Dihydroxyacetone kinase family CL176_05000 PF02734 DAK2 domain CL176_05005 PF00270 DEAD/DEAH box helicase CL176_05005 PF17191 RecG wedge domain CL176_05005 PF00271 Helicase conserved C-terminal domain CL176_05010 PF02504 Fatty acid synthesis protein CL176_05015 PF00550 Phosphopantetheine attachment site CL176_05020 PF00156 Phosphoribosyl transferase domain CL176_05035 PF12002 MgsA AAA+ ATPase C terminal CL176_05035 PF16193 AAA C-terminal domain CL176_05035 PF05496 Holliday junction DNA helicase RuvB P-loop domain CL176_05040 PF00266 Aminotransferase class-V CL176_05055 PF00005 ABC transporter CL176_05060 PF01458 Uncharacterized protein family (UPF0051) CL176_05065 PF00266 Aminotransferase class-V CL176_05070 PF01592 NifU-like N terminal domain CL176_05075 PF01458 Uncharacterized protein family (UPF0051) CL176_05085 PF08240 Alcohol dehydrogenase GroES-like domain CL176_05085 PF00107 Zinc-binding dehydrogenase CL176_05100 PF13538 UvrD-like helicase C-terminal domain CL176_05100 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CL176_05100 PF14490 Helix-hairpin-helix containing domain CL176_05105 PF00781 Diacylglycerol kinase catalytic domain CL176_05110 PF00005 ABC transporter CL176_05110 PF00571 CBS domain CL176_05115 PF00528 Binding-protein-dependent transport system inner membrane component CL176_05120 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CL176_05125 PF00528 Binding-protein-dependent transport system inner membrane component CL176_05145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CL176_05145 PF01411 tRNA synthetases class II (A) CL176_05145 PF02272 DHHA1 domain CL176_05150 PF06135 IreB regulatory phosphoprotein CL176_05155 PF03652 Holliday junction resolvase CL176_05160 PF06949 Protein of unknown function (DUF1292) CL176_05165 PF02618 YceG-like family CL176_05170 PF00485 Phosphoribulokinase / Uridine kinase family CL176_05175 PF01272 Transcription elongation factor, GreA/GreB, C-term CL176_05175 PF03449 Transcription elongation factor, N-terminal CL176_05185 PF01202 Shikimate kinase CL176_05190 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CL176_05195 PF01264 Chorismate synthase CL176_05210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CL176_05210 PF07730 Histidine kinase CL176_05215 PF00072 Response regulator receiver domain CL176_05215 PF00196 Bacterial regulatory proteins, luxR family CL176_05220 PF01521 Iron-sulphur cluster biosynthesis CL176_05225 PF01594 AI-2E family transporter CL176_05235 PF01965 DJ-1/PfpI family CL176_05240 PF02142 MGS-like domain CL176_05245 PF07724 AAA domain (Cdc48 subfamily) CL176_05245 PF17871 AAA lid domain CL176_05245 PF02861 Clp amino terminal domain, pathogenicity island component CL176_05245 PF00004 ATPase family associated with various cellular activities (AAA) CL176_05245 PF10431 C-terminal, D2-small domain, of ClpB protein CL176_05250 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CL176_05255 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CL176_05275 PF01594 AI-2E family transporter CL176_05280 PF01957 NfeD-like C-terminal, partner-binding CL176_05280 PF01972 Serine dehydrogenase proteinase CL176_05285 PF12127 SigmaW regulon antibacterial CL176_05300 PF00318 Ribosomal protein S2 CL176_05305 PF00889 Elongation factor TS CL176_05310 PF00696 Amino acid kinase family CL176_05315 PF01765 Ribosome recycling factor CL176_05320 PF00890 FAD binding domain CL176_05320 PF04205 FMN-binding domain CL176_05325 PF01610 Transposase CL176_05325 PF13683 Integrase core domain CL176_05330 PF01255 Putative undecaprenyl diphosphate synthase CL176_05340 PF17820 PDZ domain CL176_05340 PF02163 Peptidase family M50 CL176_05345 PF14480 DNA polymerase III polC-type N-terminus I CL176_05345 PF11490 DNA polymerase III polC-type N-terminus II CL176_05345 PF07733 Bacterial DNA polymerase III alpha NTPase domain CL176_05345 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CL176_05345 PF14579 Helix-hairpin-helix motif CL176_05345 PF02811 PHP domain CL176_05345 PF00929 Exonuclease CL176_05345 PF01336 OB-fold nucleic acid binding domain CL176_05350 PF03358 NADPH-dependent FMN reductase CL176_05355 PF17384 RimP C-terminal SH3 domain CL176_05355 PF02576 RimP N-terminal domain CL176_05360 PF13184 NusA-like KH domain CL176_05360 PF00575 S1 RNA binding domain CL176_05360 PF08529 NusA N-terminal domain CL176_05365 PF04296 Protein of unknown function (DUF448) CL176_05375 PF00009 Elongation factor Tu GTP binding domain CL176_05375 PF04760 Translation initiation factor IF-2, N-terminal region CL176_05375 PF00009 Elongation factor Tu GTP binding domain CL176_05375 PF11987 Translation-initiation factor 2 CL176_05375 PF04760 Translation initiation factor IF-2, N-terminal region CL176_05375 PF11987 Translation-initiation factor 2 CL176_05380 PF02033 Ribosome-binding factor A CL176_05385 PF16198 tRNA pseudouridylate synthase B C-terminal domain CL176_05385 PF01509 TruB family pseudouridylate synthase (N terminal domain) CL176_05390 PF01687 Riboflavin kinase CL176_05390 PF06574 FAD synthetase CL176_05395 PF01628 HrcA protein C terminal domain CL176_05395 PF08279 HTH domain CL176_05400 PF01025 GrpE CL176_05405 PF00012 Hsp70 protein CL176_05410 PF00226 DnaJ domain CL176_05410 PF01556 DnaJ C terminal domain CL176_05410 PF00684 DnaJ central domain CL176_05415 PF06421 GTP-binding protein LepA C-terminus CL176_05415 PF03144 Elongation factor Tu domain 2 CL176_05415 PF00009 Elongation factor Tu GTP binding domain CL176_05415 PF00679 Elongation factor G C-terminus CL176_05425 PF00210 Ferritin-like domain CL176_05430 PF00581 Rhodanese-like domain CL176_05455 PF07969 Amidohydrolase family CL176_05460 PF00171 Aldehyde dehydrogenase family CL176_05470 PF07563 Protein of unknown function (DUF1541) CL176_05510 PF00005 ABC transporter CL176_05515 PF00392 Bacterial regulatory proteins, gntR family CL176_05550 PF00665 Integrase core domain CL176_05555 PF01695 IstB-like ATP binding protein CL176_05585 PF18010 Cry35Ab1 HTH C-terminal domain CL176_05585 PF00239 Resolvase, N terminal domain CL176_05625 PF01381 Helix-turn-helix CL176_05640 PF01695 IstB-like ATP binding protein CL176_05660 PF04002 RadC-like JAB domain CL176_05680 PF00398 Ribosomal RNA adenine dimethylase CL176_05695 PF00589 Phage integrase family CL176_05700 PF02899 Phage integrase, N-terminal SAM-like domain CL176_05700 PF00589 Phage integrase family CL176_05705 PF04002 RadC-like JAB domain CL176_05730 PF16364 Cell surface antigen C-terminus CL176_05730 PF06696 Streptococcal surface antigen repeat CL176_05730 PF08363 Glucan-binding protein C CL176_05730 PF00746 LPXTG cell wall anchor motif CL176_05730 PF18652 Adhesin P1 N-terminal domain CL176_05730 PF17998 Cell surface antigen I/II C2 terminal domain CL176_05760 PF17762 HTH domain found in ParB protein CL176_05760 PF02195 ParB-like nuclease domain CL176_05765 PF13614 AAA domain CL176_05770 PF01695 IstB-like ATP binding protein CL176_05795 PF02378 Phosphotransferase system, EIIC CL176_05795 PF00367 phosphotransferase system, EIIB CL176_05795 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CL176_05800 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CL176_05800 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CL176_05805 PF08903 Domain of unknown function (DUF1846) CL176_05815 PF00171 Aldehyde dehydrogenase family CL176_05815 PF00465 Iron-containing alcohol dehydrogenase CL176_05825 PF01520 N-acetylmuramoyl-L-alanine amidase CL176_05830 PF01476 LysM domain CL176_05830 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CL176_05835 PF01476 LysM domain CL176_05835 PF01551 Peptidase family M23 CL176_05845 PF08274 PhnA Zinc-Ribbon CL176_05845 PF03831 PhnA domain CL176_05850 PF00528 Binding-protein-dependent transport system inner membrane component CL176_05865 PF09587 Bacterial capsule synthesis protein PGA_cap CL176_05870 PF00364 Biotin-requiring enzyme CL176_05870 PF02436 Conserved carboxylase domain CL176_05870 PF00682 HMGL-like CL176_05870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CL176_05870 PF02785 Biotin carboxylase C-terminal domain CL176_05870 PF00289 Biotin carboxylase, N-terminal domain CL176_05890 PF12833 Helix-turn-helix domain CL176_05895 PF00005 ABC transporter CL176_05900 PF02653 Branched-chain amino acid transport system / permease component CL176_05915 PF02833 DHHA2 domain CL176_05915 PF01368 DHH family CL176_05920 PF00521 DNA gyrase/topoisomerase IV, subunit A CL176_05920 PF03989 DNA gyrase C-terminal domain, beta-propeller CL176_05925 PF00204 DNA gyrase B CL176_05925 PF00986 DNA gyrase B subunit, carboxyl terminus CL176_05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CL176_05925 PF01751 Toprim domain CL176_05930 PF02660 Glycerol-3-phosphate acyltransferase CL176_05935 PF01263 Aldose 1-epimerase CL176_05940 PF10431 C-terminal, D2-small domain, of ClpB protein CL176_05940 PF07724 AAA domain (Cdc48 subfamily) CL176_05940 PF00004 ATPase family associated with various cellular activities (AAA) CL176_05945 PF00227 Proteasome subunit CL176_05950 PF00589 Phage integrase family CL176_05950 PF02899 Phage integrase, N-terminal SAM-like domain CL176_05955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CL176_05955 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL176_05960 PF01751 Toprim domain CL176_05960 PF01131 DNA topoisomerase CL176_05960 PF01396 Topoisomerase DNA binding C4 zinc finger CL176_05965 PF02481 DNA recombination-mediator protein A CL176_05970 PF01351 Ribonuclease HII CL176_05975 PF01926 50S ribosome-binding GTPase CL176_05980 PF10502 Signal peptidase, peptidase S26 CL176_05985 PF17820 PDZ domain CL176_05985 PF03572 Peptidase family S41 CL176_05985 PF01471 Putative peptidoglycan binding domain CL176_05990 PF06855 YozE SAM-like fold CL176_05995 PF03006 Haemolysin-III related CL176_06000 PF01569 PAP2 superfamily CL176_06005 PF00561 alpha/beta hydrolase fold CL176_06010 PF14748 Pyrroline-5-carboxylate reductase dimerisation CL176_06010 PF03807 NADP oxidoreductase coenzyme F420-dependent CL176_06015 PF00005 ABC transporter CL176_06015 PF16326 ABC transporter C-terminal domain CL176_06015 PF12848 ABC transporter CL176_06020 PF03167 Uracil DNA glycosylase superfamily CL176_06025 PF01268 Formate--tetrahydrofolate ligase CL176_06045 PF04263 Thiamin pyrophosphokinase, catalytic domain CL176_06045 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CL176_06050 PF00834 Ribulose-phosphate 3 epimerase family CL176_06055 PF16745 RsgA N-terminal domain CL176_06055 PF03193 RsgA GTPase CL176_06060 PF00069 Protein kinase domain CL176_06060 PF03793 PASTA domain CL176_06070 PF01029 NusB family CL176_06070 PF01189 16S rRNA methyltransferase RsmB/F CL176_06075 PF02911 Formyl transferase, C-terminal domain CL176_06075 PF00551 Formyl transferase CL176_06080 PF04851 Type III restriction enzyme, res subunit CL176_06080 PF00271 Helicase conserved C-terminal domain CL176_06080 PF17764 3′ DNA-binding domain (3′BD) CL176_06080 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CL176_06080 PF18074 Primosomal protein N C-terminal domain CL176_06085 PF01192 RNA polymerase Rpb6 CL176_06090 PF00625 Guanylate kinase CL176_06095 PF01813 ATP synthase subunit D CL176_06100 PF02874 ATP synthase alpha/beta family, beta-barrel domain CL176_06100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CL176_06105 PF16886 ATPsynthase alpha/beta subunit N-term extension CL176_06105 PF02874 ATP synthase alpha/beta family, beta-barrel domain CL176_06105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CL176_06110 PF01990 ATP synthase (F/14-kDa) subunit CL176_06115 PF01992 ATP synthase (C/AC39) subunit CL176_06125 PF00137 ATP synthase subunit C CL176_06130 PF01496 V-type ATPase 116kDa subunit family CL176_06150 PF17770 Ribonuclease J C-terminal domain CL176_06150 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CL176_06150 PF00753 Metallo-beta-lactamase superfamily CL176_06155 PF13439 Glycosyltransferase Family 4 CL176_06155 PF00534 Glycosyl transferases group 1 CL176_06160 PF00534 Glycosyl transferases group 1 CL176_06160 PF13439 Glycosyltransferase Family 4 CL176_06240 PF01138 3' exoribonuclease family, domain 1 CL176_06240 PF03725 3' exoribonuclease family, domain 2 CL176_06240 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CL176_06240 PF00013 KH domain CL176_06240 PF00575 S1 RNA binding domain CL176_06250 PF02687 FtsX-like permease family CL176_06250 PF12704 MacB-like periplasmic core domain CL176_06255 PF12704 MacB-like periplasmic core domain CL176_06255 PF02687 FtsX-like permease family CL176_06255 PF00005 ABC transporter CL176_06275 PF00312 Ribosomal protein S15 CL176_06280 PF01757 Acyltransferase family CL176_06285 PF02151 UvrB/uvrC motif CL176_06285 PF12344 Ultra-violet resistance protein B CL176_06285 PF17757 UvrB interaction domain CL176_06285 PF04851 Type III restriction enzyme, res subunit CL176_06285 PF00271 Helicase conserved C-terminal domain CL176_06290 PF01649 Ribosomal protein S20 CL176_06300 PF07722 Peptidase C26 CL176_06305 PF01597 Glycine cleavage H-protein CL176_06310 PF01098 Cell cycle protein CL176_06315 PF03631 Virulence factor BrkB CL176_06320 PF00300 Histidine phosphatase superfamily (branch 1) CL176_06330 PF01566 Natural resistance-associated macrophage protein CL176_06335 PF00491 Arginase family CL176_06345 PF12697 Alpha/beta hydrolase family CL176_06350 PF00497 Bacterial extracellular solute-binding proteins, family 3 CL176_06355 PF00005 ABC transporter CL176_06360 PF00528 Binding-protein-dependent transport system inner membrane component CL176_06370 PF17210 SdrD B-like domain CL176_06370 PF00746 LPXTG cell wall anchor motif CL176_06370 PF17961 Bacterial Ig domain CL176_06370 PF04650 YSIRK type signal peptide CL176_06370 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CL176_06375 PF01113 Dihydrodipicolinate reductase, N-terminus CL176_06375 PF05173 Dihydrodipicolinate reductase, C-terminus CL176_06390 PF01113 Dihydrodipicolinate reductase, N-terminus CL176_06390 PF05173 Dihydrodipicolinate reductase, C-terminus CL176_06395 PF00701 Dihydrodipicolinate synthetase family CL176_06400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CL176_06400 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CL176_06410 PF04205 FMN-binding domain CL176_06410 PF03358 NADPH-dependent FMN reductase CL176_06410 PF00890 FAD binding domain CL176_06415 PF03358 NADPH-dependent FMN reductase CL176_06415 PF04205 FMN-binding domain CL176_06415 PF00890 FAD binding domain CL176_06420 PF02424 ApbE family CL176_06425 PF01118 Semialdehyde dehydrogenase, NAD binding domain CL176_06425 PF02774 Semialdehyde dehydrogenase, dimerisation domain CL176_06450 PF13350 Tyrosine phosphatase family CL176_06455 PF00528 Binding-protein-dependent transport system inner membrane component CL176_06465 PF00005 ABC transporter CL176_06465 PF08402 TOBE domain CL176_06470 PF00528 Binding-protein-dependent transport system inner membrane component CL176_06485 PF00665 Integrase core domain CL176_06490 PF01695 IstB-like ATP binding protein CL176_06495 PF01380 SIS domain CL176_06495 PF01418 Helix-turn-helix domain, rpiR family CL176_06500 PF00145 C-5 cytosine-specific DNA methylase CL176_06505 PF02976 DNA mismatch repair enzyme MutH CL176_06515 PF00890 FAD binding domain CL176_06515 PF04205 FMN-binding domain CL176_06515 PF03358 NADPH-dependent FMN reductase CL176_06520 PF04205 FMN-binding domain CL176_06520 PF00890 FAD binding domain CL176_06525 PF04205 FMN-binding domain CL176_06525 PF00890 FAD binding domain CL176_06540 PF02538 Hydantoinase B/oxoprolinase CL176_06545 PF05378 Hydantoinase/oxoprolinase N-terminal region CL176_06545 PF01968 Hydantoinase/oxoprolinase CL176_06550 PF04205 FMN-binding domain CL176_06550 PF00890 FAD binding domain CL176_06560 PF14537 Cytochrome c3 CL176_06560 PF00890 FAD binding domain CL176_06585 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase CL176_06585 PF00756 Putative esterase CL176_06590 PF00270 DEAD/DEAH box helicase CL176_06590 PF09382 RQC domain CL176_06590 PF00570 HRDC domain CL176_06590 PF00271 Helicase conserved C-terminal domain CL176_06590 PF16124 RecQ zinc-binding CL176_06600 PF01883 Iron-sulfur cluster assembly protein CL176_06615 PF01245 Ribosomal protein L19 CL176_06620 PF01746 tRNA (Guanine-1)-methyltransferase CL176_06625 PF01782 RimM N-terminal domain CL176_06625 PF05239 PRC-barrel domain CL176_06630 PF02082 Transcriptional regulator CL176_06635 PF00528 Binding-protein-dependent transport system inner membrane component CL176_06640 PF00005 ABC transporter CL176_06640 PF00571 CBS domain CL176_06650 PF00886 Ribosomal protein S16 CL176_06655 PF00448 SRP54-type protein, GTPase domain CL176_06655 PF02881 SRP54-type protein, helical bundle domain CL176_06655 PF02978 Signal peptide binding domain CL176_06660 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CL176_06675 PF00534 Glycosyl transferases group 1 CL176_06700 PF00890 FAD binding domain CL176_06700 PF14537 Cytochrome c3 CL176_06715 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CL176_06720 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CL176_06725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CL176_06730 PF01380 SIS domain CL176_06730 PF00571 CBS domain CL176_06735 PF11975 Family 4 glycosyl hydrolase C-terminal domain CL176_06735 PF02056 Family 4 glycosyl hydrolase CL176_06740 PF02378 Phosphotransferase system, EIIC CL176_06740 PF00367 phosphotransferase system, EIIB CL176_06745 PF04205 FMN-binding domain CL176_06745 PF00890 FAD binding domain CL176_06750 PF00356 Bacterial regulatory proteins, lacI family CL176_06755 PF08244 Glycosyl hydrolases family 32 C terminal CL176_06755 PF00251 Glycosyl hydrolases family 32 N-terminal domain CL176_06765 PF00480 ROK family CL176_06770 PF00251 Glycosyl hydrolases family 32 N-terminal domain CL176_06770 PF08244 Glycosyl hydrolases family 32 C terminal CL176_06775 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CL176_06775 PF00367 phosphotransferase system, EIIB CL176_06775 PF02378 Phosphotransferase system, EIIC CL176_06780 PF13407 Periplasmic binding protein domain CL176_06780 PF00356 Bacterial regulatory proteins, lacI family CL176_06785 PF01979 Amidohydrolase family CL176_06795 PF08402 TOBE domain CL176_06795 PF00005 ABC transporter CL176_06800 PF00528 Binding-protein-dependent transport system inner membrane component CL176_06805 PF00528 Binding-protein-dependent transport system inner membrane component CL176_06810 PF00171 Aldehyde dehydrogenase family CL176_06815 PF00171 Aldehyde dehydrogenase family CL176_06820 PF01425 Amidase CL176_06830 PF13817 IS66 C-terminal element CL176_06830 PF13005 zinc-finger binding domain of transposase IS66 CL176_06830 PF03050 Transposase IS66 family CL176_06830 PF13007 Transposase C of IS166 homeodomain CL176_06835 PF03358 NADPH-dependent FMN reductase CL176_06835 PF00890 FAD binding domain CL176_06835 PF04205 FMN-binding domain CL176_06850 PF00375 Sodium:dicarboxylate symporter family CL176_06865 PF04205 FMN-binding domain CL176_06865 PF00890 FAD binding domain CL176_06865 PF03358 NADPH-dependent FMN reductase CL176_06885 PF01546 Peptidase family M20/M25/M40 CL176_06885 PF07687 Peptidase dimerisation domain CL176_06890 PF00491 Arginase family CL176_06895 PF03616 Sodium/glutamate symporter CL176_06905 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CL176_06905 PF00775 Dioxygenase CL176_06910 PF04444 Catechol dioxygenase N terminus CL176_06910 PF00775 Dioxygenase CL176_06915 PF00497 Bacterial extracellular solute-binding proteins, family 3 CL176_06935 PF07687 Peptidase dimerisation domain CL176_06935 PF01546 Peptidase family M20/M25/M40 CL176_06950 PF07687 Peptidase dimerisation domain CL176_06950 PF01546 Peptidase family M20/M25/M40 CL176_06955 PF03180 NLPA lipoprotein CL176_06965 PF08818 Domain of unknown function (DU1801) CL176_06975 PF01610 Transposase CL176_06975 PF13683 Integrase core domain CL176_07000 PF01695 IstB-like ATP binding protein CL176_07045 PF07687 Peptidase dimerisation domain CL176_07045 PF01546 Peptidase family M20/M25/M40 CL176_07065 PF13192 Thioredoxin domain CL176_07065 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL176_07070 PF00578 AhpC/TSA family CL176_07075 PF03830 PTS system sorbose subfamily IIB component CL176_07075 PF03610 PTS system fructose IIA component CL176_07095 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CL176_07095 PF02378 Phosphotransferase system, EIIC CL176_07095 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CL176_07105 PF01238 Phosphomannose isomerase type I CL176_07110 PF13419 Haloacid dehalogenase-like hydrolase CL176_07125 PF04239 Protein of unknown function (DUF421) CL176_07135 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CL176_07135 PF01502 Phosphoribosyl-AMP cyclohydrolase CL176_07140 PF00977 Histidine biosynthesis protein CL176_07145 PF00977 Histidine biosynthesis protein CL176_07150 PF00475 Imidazoleglycerol-phosphate dehydratase CL176_07155 PF00155 Aminotransferase class I and II CL176_07160 PF00815 Histidinol dehydrogenase CL176_07165 PF01634 ATP phosphoribosyltransferase CL176_07175 PF07687 Peptidase dimerisation domain CL176_07175 PF01546 Peptidase family M20/M25/M40 CL176_07180 PF01180 Dihydroorotate dehydrogenase CL176_07185 PF01979 Amidohydrolase family CL176_07190 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CL176_07190 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CL176_07195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CL176_07195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CL176_07200 PF00005 ABC transporter CL176_07200 PF00664 ABC transporter transmembrane region CL176_07205 PF00664 ABC transporter transmembrane region CL176_07205 PF00005 ABC transporter CL176_07210 PF01323 DSBA-like thioredoxin domain CL176_07215 PF03960 ArsC family CL176_07220 PF02566 OsmC-like protein CL176_07230 PF00005 ABC transporter CL176_07230 PF00664 ABC transporter transmembrane region CL176_07235 PF00005 ABC transporter CL176_07235 PF00664 ABC transporter transmembrane region CL176_07240 PF17746 SfsA N-terminal OB domain CL176_07240 PF03749 Sugar fermentation stimulation protein RE domain CL176_07255 PF00293 NUDIX domain CL176_07260 PF01022 Bacterial regulatory protein, arsR family CL176_07275 PF00291 Pyridoxal-phosphate dependent enzyme CL176_07275 PF14821 Threonine synthase N terminus CL176_07295 PF02441 Flavoprotein CL176_07295 PF04127 DNA / pantothenate metabolism flavoprotein CL176_07300 PF12822 ECF transporter, substrate-specific component CL176_07310 PF01479 S4 domain CL176_07310 PF00849 RNA pseudouridylate synthase CL176_07315 PF01252 Signal peptidase (SPase) II CL176_07330 PF00580 UvrD/REP helicase N-terminal domain CL176_07330 PF12705 PD-(D/E)XK nuclease superfamily CL176_07330 PF13361 UvrD-like helicase C-terminal domain CL176_07335 PF12705 PD-(D/E)XK nuclease superfamily CL176_07345 PF01546 Peptidase family M20/M25/M40 CL176_07345 PF07687 Peptidase dimerisation domain CL176_07350 PF01784 NIF3 (NGG1p interacting factor 3) CL176_07355 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CL176_07360 PF00155 Aminotransferase class I and II CL176_07360 PF00392 Bacterial regulatory proteins, gntR family CL176_07365 PF04539 Sigma-70 region 3 CL176_07365 PF04545 Sigma-70, region 4 CL176_07365 PF00140 Sigma-70 factor, region 1.2 CL176_07365 PF04542 Sigma-70 region 2 CL176_07365 PF03979 Sigma-70 factor, region 1.1 CL176_07370 PF08275 DNA primase catalytic core, N-terminal domain CL176_07370 PF10410 DnaB-helicase binding domain of primase CL176_07370 PF01807 CHC2 zinc finger CL176_07375 PF01926 50S ribosome-binding GTPase CL176_07380 PF06689 ClpX C4-type zinc finger CL176_07380 PF10431 C-terminal, D2-small domain, of ClpB protein CL176_07380 PF07724 AAA domain (Cdc48 subfamily) CL176_07385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CL176_07385 PF05698 Bacterial trigger factor protein (TF) C-terminus CL176_07385 PF05697 Bacterial trigger factor protein (TF) CL176_07390 PF03838 Recombination protein U CL176_07395 PF00912 Transglycosylase CL176_07395 PF00905 Penicillin binding protein transpeptidase domain CL176_07400 PF00817 impB/mucB/samB family CL176_07400 PF11799 impB/mucB/samB family C-terminal domain CL176_07400 PF11798 IMS family HHH motif CL176_07415 PF00730 HhH-GPD superfamily base excision DNA repair protein CL176_07415 PF00633 Helix-hairpin-helix motif CL176_07415 PF10576 Iron-sulfur binding domain of endonuclease III CL176_07430 PF13307 Helicase C-terminal domain CL176_07430 PF00929 Exonuclease CL176_07435 PF01743 Poly A polymerase head domain CL176_07435 PF12627 Probable RNA and SrmB- binding site of polymerase A CL176_07435 PF13735 tRNA nucleotidyltransferase domain 2 putative CL176_07440 PF08864 UPF0302 domain CL176_07440 PF08858 IDEAL domain CL176_07450 PF00216 Bacterial DNA-binding protein CL176_07455 PF01926 50S ribosome-binding GTPase CL176_07455 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CL176_07460 PF00575 S1 RNA binding domain CL176_07465 PF02224 Cytidylate kinase CL176_07475 PF12822 ECF transporter, substrate-specific component CL176_07480 PF00849 RNA pseudouridylate synthase CL176_07480 PF01479 S4 domain CL176_07485 PF04079 Segregation and condensation complex subunit ScpB CL176_07490 PF02616 Segregation and condensation protein ScpA CL176_07500 PF01048 Phosphorylase superfamily CL176_07505 PF01676 Metalloenzyme superfamily CL176_07510 PF02899 Phage integrase, N-terminal SAM-like domain CL176_07510 PF00589 Phage integrase family CL176_07515 PF17783 CvfB-like winged helix domain CL176_07515 PF13509 S1 domain CL176_07520 PF02887 Pyruvate kinase, alpha/beta domain CL176_07520 PF00224 Pyruvate kinase, barrel domain CL176_07520 PF00391 PEP-utilising enzyme, mobile domain CL176_07525 PF00365 Phosphofructokinase CL176_07530 PF07733 Bacterial DNA polymerase III alpha NTPase domain CL176_07530 PF01336 OB-fold nucleic acid binding domain CL176_07530 PF14579 Helix-hairpin-helix motif CL176_07530 PF02811 PHP domain CL176_07530 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CL176_07535 PF02547 Queuosine biosynthesis protein CL176_07540 PF05496 Holliday junction DNA helicase RuvB P-loop domain CL176_07540 PF17864 RuvB AAA lid domain CL176_07540 PF05491 RuvB C-terminal winged helix domain CL176_07545 PF07499 RuvA, C-terminal domain CL176_07545 PF01330 RuvA N terminal domain CL176_07550 PF01641 SelR domain CL176_07550 PF08534 Redoxin CL176_07550 PF01625 Peptide methionine sulfoxide reductase CL176_07555 PF01119 DNA mismatch repair protein, C-terminal domain CL176_07555 PF08676 MutL C terminal dimerisation domain CL176_07560 PF05188 MutS domain II CL176_07560 PF05190 MutS family domain IV CL176_07560 PF00488 MutS domain V CL176_07560 PF01624 MutS domain I CL176_07560 PF05192 MutS domain III CL176_07570 PF00664 ABC transporter transmembrane region CL176_07570 PF00005 ABC transporter CL176_07575 PF01016 Ribosomal L27 protein CL176_07585 PF00829 Ribosomal prokaryotic L21 protein CL176_07590 PF12072 Domain of unknown function (DUF3552) CL176_07590 PF00013 KH domain CL176_07590 PF01966 HD domain CL176_07595 PF00154 recA bacterial DNA recombination protein CL176_07600 PF00994 Probable molybdopterin binding domain CL176_07600 PF18146 Damage-inducible protein CinA KH domain CL176_07600 PF02464 Competence-damaged protein CL176_07605 PF01066 CDP-alcohol phosphatidyltransferase CL176_07610 PF13464 Domain of unknown function (DUF4115) CL176_07615 PF00675 Insulinase (Peptidase family M16) CL176_07615 PF05193 Peptidase M16 inactive domain CL176_07620 PF05193 Peptidase M16 inactive domain CL176_07625 PF13683 Integrase core domain CL176_07625 PF01610 Transposase CL176_07645 PF02608 ABC transporter substrate-binding protein PnrA-like CL176_07650 PF01580 FtsK/SpoIIIE family CL176_07650 PF17854 FtsK alpha domain CL176_07650 PF09397 Ftsk gamma domain CL176_07655 PF00708 Acylphosphatase CL176_07660 PF02096 60Kd inner membrane protein CL176_07665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CL176_07665 PF00512 His Kinase A (phospho-acceptor) domain CL176_07665 PF18719 ArlS sensor domain CL176_07670 PF00486 Transcriptional regulatory protein, C terminal CL176_07670 PF00072 Response regulator receiver domain CL176_07675 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CL176_07675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CL176_07680 PF00581 Rhodanese-like domain CL176_07685 PF00480 ROK family CL176_07695 PF01812 5-formyltetrahydrofolate cyclo-ligase family CL176_07700 PF00471 Ribosomal protein L33 CL176_07740 PF00665 Integrase core domain CL176_07740 PF13333 Integrase core domain CL176_07740 PF13276 HTH-like domain CL176_07750 PF00271 Helicase conserved C-terminal domain CL176_07750 PF00270 DEAD/DEAH box helicase CL176_07755 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CL176_07755 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CL176_07760 PF02272 DHHA1 domain CL176_07760 PF01368 DHH family CL176_07765 PF00571 CBS domain CL176_07765 PF03061 Thioesterase superfamily CL176_07765 PF00392 Bacterial regulatory proteins, gntR family CL176_07765 PF07085 DRTGG domain CL176_07770 PF11799 impB/mucB/samB family C-terminal domain CL176_07770 PF00817 impB/mucB/samB family CL176_07770 PF11798 IMS family HHH motif CL176_07775 PF02699 Preprotein translocase subunit CL176_07780 PF01702 Queuine tRNA-ribosyltransferase CL176_07790 PF01553 Acyltransferase CL176_07795 PF03672 Uncharacterised protein family (UPF0154) CL176_07800 PF05979 Bacterial protein of unknown function (DUF896) CL176_07805 PF00717 Peptidase S24-like CL176_07805 PF01726 LexA DNA binding domain CL176_07810 PF00156 Phosphoribosyl transferase domain CL176_07815 PF01368 DHH family CL176_07815 PF02272 DHHA1 domain CL176_07815 PF17768 RecJ OB domain CL176_07815 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CL176_07825 PF00106 short chain dehydrogenase CL176_07830 PF00753 Metallo-beta-lactamase superfamily CL176_07835 PF01757 Acyltransferase family CL176_07840 PF01018 GTP1/OBG CL176_07840 PF09269 Domain of unknown function (DUF1967) CL176_07840 PF01926 50S ribosome-binding GTPase CL176_07845 PF02092 Glycyl-tRNA synthetase beta subunit CL176_07845 PF05746 DALR anticodon binding domain CL176_07850 PF02091 Glycyl-tRNA synthetase alpha subunit CL176_07855 PF11967 Recombination protein O N terminal CL176_07855 PF02565 Recombination protein O C terminal CL176_07860 PF01926 50S ribosome-binding GTPase CL176_07860 PF07650 KH domain CL176_07865 PF01219 Prokaryotic diacylglycerol kinase CL176_07870 PF02130 Uncharacterized protein family UPF0054 CL176_07875 PF01966 HD domain CL176_07875 PF07697 7TM-HD extracellular CL176_07875 PF07698 7TM receptor with intracellular HD hydrolase CL176_07880 PF02562 PhoH-like protein CL176_07885 PF09424 Yqey-like protein CL176_07890 PF01165 Ribosomal protein S21 CL176_07895 PF01475 Ferric uptake regulator family CL176_07905 PF01261 Xylose isomerase-like TIM barrel CL176_07910 PF01336 OB-fold nucleic acid binding domain CL176_07910 PF02938 GAD domain CL176_07910 PF00152 tRNA synthetases class II (D, K and N) CL176_07915 PF13393 Histidyl-tRNA synthetase CL176_07915 PF03129 Anticodon binding domain CL176_07930 PF01520 N-acetylmuramoyl-L-alanine amidase CL176_07935 PF02580 D-Tyr-tRNA(Tyr) deacylase CL176_07940 PF04607 Region found in RelA / SpoT proteins CL176_07940 PF13291 ACT domain CL176_07940 PF02824 TGS domain CL176_07950 PF01791 DeoC/LacD family aldolase CL176_07955 PF04452 RNA methyltransferase CL176_07970 PF05103 DivIVA protein CL176_07980 PF01170 Putative RNA methylase family UPF0020 CL176_07980 PF02926 THUMP domain CL176_07985 PF13456 Reverse transcriptase-like CL176_08000 PF00781 Diacylglycerol kinase catalytic domain CL176_08010 PF00912 Transglycosylase CL176_08010 PF00905 Penicillin binding protein transpeptidase domain CL176_08015 PF02146 Sir2 family CL176_08020 PF01546 Peptidase family M20/M25/M40 CL176_08020 PF07687 Peptidase dimerisation domain CL176_08025 PF02774 Semialdehyde dehydrogenase, dimerisation domain CL176_08025 PF01118 Semialdehyde dehydrogenase, NAD binding domain CL176_08030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CL176_08030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CL176_08035 PF00202 Aminotransferase class-III CL176_08040 PF00696 Amino acid kinase family CL176_08050 PF02926 THUMP domain CL176_08050 PF02568 Thiamine biosynthesis protein (ThiI) CL176_08055 PF00266 Aminotransferase class-V CL176_08065 PF06160 Septation ring formation regulator, EzrA CL176_08070 PF01479 S4 domain CL176_08070 PF00163 Ribosomal protein S4/S9 N-terminal domain CL176_08075 PF00005 ABC transporter CL176_08080 PF00528 Binding-protein-dependent transport system inner membrane component CL176_08085 PF01048 Phosphorylase superfamily CL176_08095 PF00293 NUDIX domain CL176_08105 PF05816 Toxic anion resistance protein (TelA) CL176_08110 PF12464 Maltose acetyltransferase CL176_08110 PF00132 Bacterial transferase hexapeptide (six repeats) CL176_08110 PF14602 Hexapeptide repeat of succinyl-transferase CL176_08115 PF06827 Zinc finger found in FPG and IleRS CL176_08115 PF00133 tRNA synthetases class I (I, L, M and V) CL176_08115 PF08264 Anticodon-binding domain of tRNA CL176_08120 PF05103 DivIVA protein CL176_08130 PF02325 YGGT family CL176_08135 PF12327 FtsZ family, C-terminal domain CL176_08135 PF00091 Tubulin/FtsZ family, GTPase domain CL176_08140 PF02491 SHS2 domain inserted in FTSA CL176_08140 PF11983 Membrane-attachment and polymerisation-promoting switch CL176_08145 PF03799 Cell division protein FtsQ CL176_08145 PF08478 POTRA domain, FtsQ-type CL176_08150 PF03033 Glycosyltransferase family 28 N-terminal domain CL176_08150 PF04101 Glycosyltransferase family 28 C-terminal domain CL176_08155 PF08245 Mur ligase middle domain CL176_08155 PF02875 Mur ligase family, glutamate ligase domain CL176_08160 PF00953 Glycosyl transferase family 4 CL176_08165 PF01225 Mur ligase family, catalytic domain CL176_08165 PF02875 Mur ligase family, glutamate ligase domain CL176_08165 PF08245 Mur ligase middle domain CL176_08170 PF03793 PASTA domain CL176_08170 PF00905 Penicillin binding protein transpeptidase domain CL176_08170 PF03717 Penicillin-binding Protein dimerisation domain CL176_08180 PF01795 MraW methylase family CL176_08185 PF02381 MraZ protein, putative antitoxin-like CL176_08205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CL176_08215 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal CL176_08215 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal CL176_08220 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CL176_08230 PF01300 Telomere recombination CL176_08230 PF03481 Putative GTP-binding controlling metal-binding CL176_08235 PF05175 Methyltransferase small domain CL176_08235 PF17827 PrmC N-terminal domain CL176_08240 PF00472 RF-1 domain CL176_08240 PF03462 PCRF domain CL176_08245 PF00265 Thymidine kinase CL176_08255 PF08353 Domain of unknown function (DUF1727) CL176_08255 PF08245 Mur ligase middle domain CL176_08260 PF04474 Protein of unknown function (DUF554) CL176_08270 PF01594 AI-2E family transporter CL176_08275 PF10282 Lactonase, 7-bladed beta-propeller CL176_08280 PF01470 Pyroglutamyl peptidase CL176_08285 PF02673 Bacitracin resistance protein BacA CL176_08290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CL176_08290 PF02403 Seryl-tRNA synthetase N-terminal domain CL176_08295 PF00588 SpoU rRNA Methylase family CL176_08300 PF08331 Domain of unknown function (DUF1730) CL176_08305 PF14693 Ribosomal protein TL5, C-terminal domain CL176_08305 PF01386 Ribosomal L25p family CL176_08320 PF05698 Bacterial trigger factor protein (TF) C-terminus CL176_08330 PF01230 HIT domain CL176_08355 PF01336 OB-fold nucleic acid binding domain CL176_08355 PF01966 HD domain CL176_08360 PF13514 AAA domain CL176_08365 PF00149 Calcineurin-like phosphoesterase CL176_08365 PF12320 Type 5 capsule protein repressor C-terminal domain CL176_08370 PF06133 Control of competence regulator ComK, YlbF/YmcA CL176_08375 PF00905 Penicillin binding protein transpeptidase domain CL176_08375 PF00912 Transglycosylase CL176_08380 PF00534 Glycosyl transferases group 1 CL176_08380 PF08323 Starch synthase catalytic domain CL176_08385 PF00483 Nucleotidyl transferase CL176_08390 PF00483 Nucleotidyl transferase CL176_08395 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CL176_08395 PF02806 Alpha amylase, C-terminal all-beta domain CL176_08395 PF00128 Alpha amylase, catalytic domain CL176_08405 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CL176_08410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CL176_08430 PF00343 Carbohydrate phosphorylase CL176_08440 PF01709 Transcriptional regulator CL176_08445 PF02586 SOS response associated peptidase (SRAP) CL176_08455 PF01594 AI-2E family transporter CL176_08460 PF00528 Binding-protein-dependent transport system inner membrane component CL176_08465 PF00005 ABC transporter CL176_08470 PF02557 D-alanyl-D-alanine carboxypeptidase CL176_08475 PF00248 Aldo/keto reductase family CL176_08480 PF05816 Toxic anion resistance protein (TelA) CL176_08500 PF00962 Adenosine/AMP deaminase CL176_08515 PF01960 ArgJ family CL176_08535 PF01053 Cys/Met metabolism PLP-dependent enzyme CL176_08540 PF04204 Homoserine O-succinyltransferase CL176_08545 PF02576 RimP N-terminal domain CL176_08545 PF17384 RimP C-terminal SH3 domain CL176_08565 PF02887 Pyruvate kinase, alpha/beta domain CL176_08565 PF00224 Pyruvate kinase, barrel domain CL176_08565 PF00391 PEP-utilising enzyme, mobile domain CL176_08570 PF00005 ABC transporter CL176_08575 PF00528 Binding-protein-dependent transport system inner membrane component CL176_08580 PF01458 Uncharacterized protein family (UPF0051) CL176_08585 PF00585 C-terminal regulatory domain of Threonine dehydratase CL176_08585 PF00291 Pyridoxal-phosphate dependent enzyme CL176_08590 PF01042 Endoribonuclease L-PSP CL176_08595 PF01883 Iron-sulfur cluster assembly protein CL176_08600 PF00920 Dehydratase family CL176_08605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CL176_08605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CL176_08605 PF00205 Thiamine pyrophosphate enzyme, central domain CL176_08610 PF01842 ACT domain CL176_08610 PF10369 Small subunit of acetolactate synthase CL176_08615 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CL176_08615 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CL176_08620 PF00005 ABC transporter CL176_08640 PF00528 Binding-protein-dependent transport system inner membrane component CL176_08645 PF09084 NMT1/THI5 like CL176_08650 PF00005 ABC transporter CL176_08665 PF00274 Fructose-bisphosphate aldolase class-I CL176_08670 PF08439 Oligopeptidase F CL176_08670 PF01432 Peptidase family M3 CL176_08690 PF01425 Amidase CL176_08705 PF00294 pfkB family carbohydrate kinase CL176_08710 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CL176_08715 PF03747 ADP-ribosylglycohydrolase CL176_08730 PF03613 PTS system mannose/fructose/sorbose family IID component CL176_08735 PF03609 PTS system sorbose-specific iic component CL176_08740 PF03610 PTS system fructose IIA component CL176_08740 PF03830 PTS system sorbose subfamily IIB component CL176_08745 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CL176_08750 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CL176_08755 PF07685 CobB/CobQ-like glutamine amidotransferase domain CL176_08760 PF03186 CobD/Cbib protein CL176_08765 PF00288 GHMP kinases N terminal domain CL176_08765 PF08544 GHMP kinases C terminal CL176_08775 PF02654 Cobalamin-5-phosphate synthase CL176_08780 PF01515 Phosphate acetyl/butaryl transferase CL176_08790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CL176_08795 PF04346 Ethanolamine utilisation protein, EutH CL176_08810 PF06130 Phosphate propanoyltransferase CL176_08820 PF00936 BMC domain CL176_08825 PF00171 Aldehyde dehydrogenase family CL176_08825 PF00465 Iron-containing alcohol dehydrogenase CL176_08835 PF00936 BMC domain CL176_08840 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CL176_08845 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CL176_08850 PF06277 Ethanolamine utilisation protein EutA CL176_08855 PF07568 Histidine kinase CL176_08855 PF12282 Signal transduction histidine kinase CL176_08855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CL176_08865 PF00465 Iron-containing alcohol dehydrogenase CL176_08870 PF01923 Cobalamin adenosyltransferase CL176_08875 PF10662 Ethanolamine utilisation - propanediol utilisation CL176_08880 PF00936 BMC domain CL176_08890 PF13005 zinc-finger binding domain of transposase IS66 CL176_08890 PF03050 Transposase IS66 family CL176_08890 PF13817 IS66 C-terminal element CL176_08890 PF13007 Transposase C of IS166 homeodomain CL176_08900 PF00005 ABC transporter CL176_08905 PF01032 FecCD transport family CL176_08915 PF00881 Nitroreductase family CL176_08930 PF00490 Delta-aminolevulinic acid dehydratase CL176_08940 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CL176_08940 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CL176_08940 PF01488 Shikimate / quinate 5-dehydrogenase CL176_08945 PF10414 Sirohaem synthase dimerisation region CL176_08945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CL176_08945 PF14824 Sirohaem biosynthesis protein central CL176_08950 PF01923 Cobalamin adenosyltransferase CL176_08955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CL176_08965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CL176_08970 PF02571 Precorrin-6x reductase CbiJ/CobK CL176_08975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CL176_08980 PF11761 Cobalamin biosynthesis central region CL176_08980 PF01890 Cobalamin synthesis G C-terminus CL176_08980 PF11760 Cobalamin synthesis G N-terminal CL176_08985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CL176_08990 PF05175 Methyltransferase small domain CL176_08995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CL176_09000 PF01888 CbiD CL176_09005 PF02570 Precorrin-8X methylmutase CL176_09010 PF07685 CobB/CobQ-like glutamine amidotransferase domain CL176_09010 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CL176_09015 PF00202 Aminotransferase class-III CL176_09020 PF00258 Flavodoxin CL176_09025 PF02277 Phosphoribosyltransferase CL176_09040 PF00005 ABC transporter CL176_09070 PF01661 Macro domain CL176_09075 PF01597 Glycine cleavage H-protein CL176_09080 PF00296 Luciferase-like monooxygenase CL176_09085 PF03099 Biotin/lipoate A/B protein ligase family CL176_09085 PF10437 Bacterial lipoate protein ligase C-terminus CL176_09095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CL176_09095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CL176_09095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CL176_09095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CL176_09120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CL176_09125 PF06969 HemN C-terminal domain CL176_09125 PF04055 Radical SAM superfamily CL176_09170 PF03358 NADPH-dependent FMN reductase CL176_09185 PF01156 Inosine-uridine preferring nucleoside hydrolase CL176_09195 PF07690 Major Facilitator Superfamily CL176_09200 PF00156 Phosphoribosyl transferase domain CL176_09205 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CL176_09245 PF01026 TatD related DNase CL176_09250 PF00899 ThiF family CL176_09260 PF00809 Pterin binding enzyme CL176_09265 PF01227 GTP cyclohydrolase I CL176_09270 PF01966 HD domain CL176_09275 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CL176_09275 PF02152 Dihydroneopterin aldolase CL176_09285 PF08245 Mur ligase middle domain CL176_09285 PF02875 Mur ligase family, glutamate ligase domain CL176_09290 PF00571 CBS domain CL176_09290 PF03471 Transporter associated domain CL176_09295 PF03180 NLPA lipoprotein CL176_09300 PF00005 ABC transporter CL176_09300 PF03459 TOBE domain CL176_09300 PF17912 MalK OB fold domain CL176_09305 PF12833 Helix-turn-helix domain CL176_09305 PF02311 AraC-like ligand binding domain CL176_09310 PF01547 Bacterial extracellular solute-binding protein CL176_09320 PF00528 Binding-protein-dependent transport system inner membrane component CL176_09325 PF16875 Glycosyl hydrolase family 36 N-terminal domain CL176_09325 PF16874 Glycosyl hydrolase family 36 C-terminal domain CL176_09330 PF16874 Glycosyl hydrolase family 36 C-terminal domain CL176_09330 PF16875 Glycosyl hydrolase family 36 N-terminal domain CL176_09340 PF08544 GHMP kinases C terminal CL176_09340 PF00288 GHMP kinases N terminal domain CL176_09340 PF10509 Galactokinase galactose-binding signature CL176_09345 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CL176_09345 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CL176_09350 PF16363 GDP-mannose 4,6 dehydratase CL176_09355 PF01263 Aldose 1-epimerase CL176_09365 PF01527 Transposase CL176_09380 PF13333 Integrase core domain CL176_09380 PF00665 Integrase core domain CL176_09380 PF13276 HTH-like domain CL176_09385 PF02929 Beta galactosidase small chain CL176_09385 PF00703 Glycosyl hydrolases family 2 CL176_09385 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CL176_09385 PF02837 Glycosyl hydrolases family 2, sugar binding domain CL176_09390 PF16363 GDP-mannose 4,6 dehydratase CL176_09400 PF08544 GHMP kinases C terminal CL176_09400 PF10509 Galactokinase galactose-binding signature CL176_09400 PF00288 GHMP kinases N terminal domain CL176_09410 PF01263 Aldose 1-epimerase CL176_09415 PF12833 Helix-turn-helix domain CL176_09420 PF00464 Serine hydroxymethyltransferase CL176_09430 PF01256 Carbohydrate kinase CL176_09445 PF02535 ZIP Zinc transporter CL176_09460 PF13597 Anaerobic ribonucleoside-triphosphate reductase CL176_09460 PF03477 ATP cone domain CL176_09465 PF00291 Pyridoxal-phosphate dependent enzyme CL176_09485 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CL176_09490 PF01168 Alanine racemase, N-terminal domain CL176_09500 PF00403 Heavy-metal-associated domain CL176_09505 PF00403 Heavy-metal-associated domain CL176_09520 PF03180 NLPA lipoprotein CL176_09545 PF01476 LysM domain CL176_09545 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CL176_09565 PF01420 Type I restriction modification DNA specificity domain CL176_09575 PF04851 Type III restriction enzyme, res subunit CL176_09575 PF08463 EcoEI R protein C-terminal CL176_09575 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CL176_09575 PF00271 Helicase conserved C-terminal domain CL176_09595 PF13411 MerR HTH family regulatory protein CL176_09620 PF03572 Peptidase family S41 CL176_09630 PF00005 ABC transporter CL176_09635 PF00392 Bacterial regulatory proteins, gntR family CL176_09645 PF13936 Helix-turn-helix domain CL176_09650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CL176_09650 PF00512 His Kinase A (phospho-acceptor) domain CL176_09655 PF01470 Pyroglutamyl peptidase CL176_09695 PF02789 Cytosol aminopeptidase family, N-terminal domain CL176_09695 PF00883 Cytosol aminopeptidase family, catalytic domain CL176_09710 PF01695 IstB-like ATP binding protein CL176_09730 PF00270 DEAD/DEAH box helicase CL176_09730 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CL176_09730 PF17191 RecG wedge domain CL176_09755 PF00512 His Kinase A (phospho-acceptor) domain CL176_09755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CL176_09765 PF01610 Transposase CL176_09765 PF13683 Integrase core domain CL176_09770 PF13439 Glycosyltransferase Family 4 CL176_09770 PF00534 Glycosyl transferases group 1 CL176_09785 PF00005 ABC transporter CL176_09790 PF00486 Transcriptional regulatory protein, C terminal CL176_09790 PF00072 Response regulator receiver domain CL176_09820 PF01695 IstB-like ATP binding protein CL176_09880 PF11798 IMS family HHH motif CL176_09880 PF11799 impB/mucB/samB family C-terminal domain CL176_09880 PF00817 impB/mucB/samB family CL176_09890 PF01381 Helix-turn-helix CL176_09890 PF00717 Peptidase S24-like CL176_09920 PF03432 Relaxase/Mobilisation nuclease domain CL176_09930 PF01381 Helix-turn-helix CL176_09935 PF01381 Helix-turn-helix CL176_09950 PF00005 ABC transporter CL176_09965 PF02920 DNA binding domain of tn916 integrase CL176_09965 PF00589 Phage integrase family CL176_09970 PF09035 Excisionase from transposon Tn916 CL176_09980 PF00665 Integrase core domain CL176_09985 PF01695 IstB-like ATP binding protein CL176_10010 PF00009 Elongation factor Tu GTP binding domain CL176_10010 PF03764 Elongation factor G, domain IV CL176_10010 PF00679 Elongation factor G C-terminus CL176_10010 PF14492 Elongation Factor G, domain II CL176_10025 PF00877 NlpC/P60 family CL176_10055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CL176_10065 PF02875 Mur ligase family, glutamate ligase domain CL176_10065 PF08245 Mur ligase middle domain CL176_10080 PF03976 Polyphosphate kinase 2 (PPK2) CL176_10085 PF00849 RNA pseudouridylate synthase CL176_10085 PF01479 S4 domain CL176_10090 PF06628 Catalase-related immune-responsive CL176_10090 PF00199 Catalase CL176_10095 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CL176_10095 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CL176_10100 PF01557 Fumarylacetoacetate (FAA) hydrolase family CL176_10105 PF01557 Fumarylacetoacetate (FAA) hydrolase family CL176_10120 PF09587 Bacterial capsule synthesis protein PGA_cap CL176_10125 PF14278 Transcriptional regulator C-terminal region CL176_10125 PF00440 Bacterial regulatory proteins, tetR family CL176_10130 PF12464 Maltose acetyltransferase CL176_10130 PF14602 Hexapeptide repeat of succinyl-transferase CL176_10145 PF00155 Aminotransferase class I and II CL176_10160 PF12804 MobA-like NTP transferase domain CL176_10170 PF00384 Molybdopterin oxidoreductase CL176_10170 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CL176_10170 PF01568 Molydopterin dinucleotide binding domain CL176_10180 PF00005 ABC transporter CL176_10190 PF05958 tRNA (Uracil-5-)-methyltransferase CL176_10190 PF01938 TRAM domain CL176_10200 PF02086 D12 class N6 adenine-specific DNA methyltransferase CL176_10205 PF01610 Transposase CL176_10205 PF13683 Integrase core domain CL176_10255 PF01695 IstB-like ATP binding protein CL176_10265 PF18652 Adhesin P1 N-terminal domain CL176_10265 PF16364 Cell surface antigen C-terminus CL176_10265 PF08363 Glucan-binding protein C CL176_10265 PF06696 Streptococcal surface antigen repeat CL176_10265 PF17998 Cell surface antigen I/II C2 terminal domain CL176_10265 PF08363 Glucan-binding protein C CL176_10265 PF16364 Cell surface antigen C-terminus CL176_10265 PF17998 Cell surface antigen I/II C2 terminal domain CL176_10265 PF18652 Adhesin P1 N-terminal domain CL176_10265 PF06696 Streptococcal surface antigen repeat CL176_10330 PF00145 C-5 cytosine-specific DNA methylase CL176_10355 PF05958 tRNA (Uracil-5-)-methyltransferase CL176_10355 PF01938 TRAM domain CL176_10360 PF02664 S-Ribosylhomocysteinase (LuxS) CL176_10385 PF00575 S1 RNA binding domain CL176_10385 PF16921 Tex protein YqgF-like domain CL176_10385 PF09371 Tex-like protein N-terminal domain CL176_10385 PF17674 HHH domain CL176_10395 PF01022 Bacterial regulatory protein, arsR family CL176_10425 PF03591 AzlC protein CL176_10430 PF05437 Branched-chain amino acid transport protein (AzlD) CL176_10440 PF00080 Copper/zinc superoxide dismutase (SODC) CL176_10460 PF03553 Na+/H+ antiporter family CL176_10465 PF00248 Aldo/keto reductase family CL176_10475 PF00478 IMP dehydrogenase / GMP reductase domain CL176_10485 PF02378 Phosphotransferase system, EIIC CL176_10485 PF00367 phosphotransferase system, EIIB CL176_10495 PF03932 CutC family CL176_10500 PF01979 Amidohydrolase family CL176_10505 PF04343 Protein of unknown function, DUF488 CL176_10510 PF05746 DALR anticodon binding domain CL176_10510 PF03485 Arginyl tRNA synthetase N terminal domain CL176_10510 PF00750 tRNA synthetases class I (R) CL176_10520 PF04203 Sortase domain CL176_10525 PF00689 Cation transporting ATPase, C-terminus CL176_10525 PF00690 Cation transporter/ATPase, N-terminus CL176_10530 PF03788 LrgA family CL176_10535 PF04172 LrgB-like family CL176_10545 PF08544 GHMP kinases C terminal CL176_10545 PF00288 GHMP kinases N terminal domain CL176_10550 PF01842 ACT domain CL176_10550 PF03447 Homoserine dehydrogenase, NAD binding domain CL176_10550 PF00742 Homoserine dehydrogenase CL176_10555 PF13840 ACT domain CL176_10555 PF00696 Amino acid kinase family CL176_10560 PF00171 Aldehyde dehydrogenase family CL176_10565 PF00696 Amino acid kinase family CL176_10570 PF01451 Low molecular weight phosphotyrosine protein phosphatase CL176_10575 PF01965 DJ-1/PfpI family CL176_10590 PF02608 ABC transporter substrate-binding protein PnrA-like CL176_10595 PF00664 ABC transporter transmembrane region CL176_10595 PF00005 ABC transporter CL176_10600 PF00664 ABC transporter transmembrane region CL176_10600 PF00005 ABC transporter CL176_10605 PF00266 Aminotransferase class-V CL176_10610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CL176_10610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CL176_10615 PF02446 4-alpha-glucanotransferase CL176_10620 PF00403 Heavy-metal-associated domain CL176_10630 PF00128 Alpha amylase, catalytic domain CL176_10630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CL176_10630 PF17999 Pullulanase N1-terminal domain CL176_10640 PF06874 Firmicute fructose-1,6-bisphosphatase CL176_10655 PF03616 Sodium/glutamate symporter CL176_10660 PF00005 ABC transporter CL176_10680 PF00072 Response regulator receiver domain CL176_10680 PF00196 Bacterial regulatory proteins, luxR family CL176_10695 PF01695 IstB-like ATP binding protein CL176_10705 PF00117 Glutamine amidotransferase class-I CL176_10705 PF00958 GMP synthase C terminal domain CL176_10705 PF02540 NAD synthase CL176_10710 PF00485 Phosphoribulokinase / Uridine kinase family CL176_10715 PF00288 GHMP kinases N terminal domain CL176_10715 PF10509 Galactokinase galactose-binding signature CL176_10715 PF08544 GHMP kinases C terminal CL176_10725 PF08544 GHMP kinases C terminal CL176_10725 PF00288 GHMP kinases N terminal domain CL176_10730 PF01070 FMN-dependent dehydrogenase CL176_10740 PF01381 Helix-turn-helix CL176_10745 PF02885 Glycosyl transferase family, helical bundle domain CL176_10745 PF00591 Glycosyl transferase family, a/b domain CL176_10745 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CL176_10750 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CL176_10765 PF12704 MacB-like periplasmic core domain CL176_10765 PF02687 FtsX-like permease family CL176_10765 PF00005 ABC transporter CL176_10770 PF00561 alpha/beta hydrolase fold CL176_10780 PF00535 Glycosyl transferase family 2 CL176_10795 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CL176_10795 PF01565 FAD binding domain CL176_10815 PF01515 Phosphate acetyl/butaryl transferase CL176_10820 PF03965 Penicillinase repressor CL176_10830 PF00403 Heavy-metal-associated domain CL176_10845 PF17941 Polyphosphate kinase C-terminal domain 1 CL176_10845 PF13089 Polyphosphate kinase N-terminal domain CL176_10845 PF02503 Polyphosphate kinase middle domain CL176_10845 PF13090 Polyphosphate kinase C-terminal domain 2 CL176_10850 PF00005 ABC transporter CL176_10850 PF12848 ABC transporter CL176_10855 PF01709 Transcriptional regulator CL176_10860 PF00255 Glutathione peroxidase CL176_10870 PF00478 IMP dehydrogenase / GMP reductase domain CL176_10870 PF00571 CBS domain CL176_10875 PF00005 ABC transporter CL176_10880 PF12399 Branched-chain amino acid ATP-binding cassette transporter CL176_10880 PF00005 ABC transporter CL176_10885 PF11862 Domain of unknown function (DUF3382) CL176_10885 PF02653 Branched-chain amino acid transport system / permease component CL176_10890 PF02653 Branched-chain amino acid transport system / permease component CL176_10900 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CL176_10900 PF00056 lactate/malate dehydrogenase, NAD binding domain CL176_10910 PF00694 Aconitase C-terminal domain CL176_10915 PF00330 Aconitase family (aconitate hydratase) CL176_10920 PF00694 Aconitase C-terminal domain CL176_10925 PF00180 Isocitrate/isopropylmalate dehydrogenase CL176_10930 PF08502 LeuA allosteric (dimerisation) domain CL176_10930 PF00682 HMGL-like CL176_10940 PF13458 Periplasmic binding protein CL176_10955 PF00005 ABC transporter CL176_10965 PF00027 Cyclic nucleotide-binding domain CL176_10965 PF13545 Crp-like helix-turn-helix domain CL176_10975 PF00300 Histidine phosphatase superfamily (branch 1) CL176_10980 PF00950 ABC 3 transport family CL176_10985 PF00005 ABC transporter CL176_10990 PF01297 Zinc-uptake complex component A periplasmic CL176_11005 PF13683 Integrase core domain CL176_11005 PF01610 Transposase CL176_11010 PF00883 Cytosol aminopeptidase family, catalytic domain CL176_11010 PF02789 Cytosol aminopeptidase family, N-terminal domain CL176_11015 PF00633 Helix-hairpin-helix motif CL176_11015 PF00730 HhH-GPD superfamily base excision DNA repair protein CL176_11015 PF10576 Iron-sulfur binding domain of endonuclease III CL176_11020 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CL176_11020 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CL176_11025 PF02417 Chromate transporter CL176_11030 PF02417 Chromate transporter CL176_11035 PF03466 LysR substrate binding domain CL176_11035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CL176_11055 PF01416 tRNA pseudouridine synthase CL176_11060 PF02361 Cobalt transport protein CL176_11065 PF00005 ABC transporter CL176_11070 PF00005 ABC transporter CL176_11075 PF01196 Ribosomal protein L17 CL176_11080 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CL176_11080 PF01000 RNA polymerase Rpb3/RpoA insert domain CL176_11080 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CL176_11085 PF00411 Ribosomal protein S11 CL176_11090 PF00416 Ribosomal protein S13/S18 CL176_11095 PF00444 Ribosomal protein L36 CL176_11100 PF01176 Translation initiation factor 1A / IF-1 CL176_11105 PF05191 Adenylate kinase, active site lid CL176_11110 PF00344 SecY translocase CL176_11115 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CL176_11120 PF00327 Ribosomal protein L30p/L7e CL176_11125 PF00333 Ribosomal protein S5, N-terminal domain CL176_11125 PF03719 Ribosomal protein S5, C-terminal domain CL176_11130 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CL176_11135 PF00347 Ribosomal protein L6 CL176_11140 PF00410 Ribosomal protein S8 CL176_11145 PF00253 Ribosomal protein S14p/S29e CL176_11150 PF00281 Ribosomal protein L5 CL176_11150 PF00673 ribosomal L5P family C-terminus CL176_11155 PF00467 KOW motif CL176_11155 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CL176_11160 PF00238 Ribosomal protein L14p/L23e CL176_11165 PF00366 Ribosomal protein S17 CL176_11170 PF00831 Ribosomal L29 protein CL176_11175 PF00252 Ribosomal protein L16p/L10e CL176_11180 PF00189 Ribosomal protein S3, C-terminal domain CL176_11180 PF07650 KH domain CL176_11185 PF00237 Ribosomal protein L22p/L17e CL176_11190 PF00203 Ribosomal protein S19 CL176_11195 PF03947 Ribosomal Proteins L2, C-terminal domain CL176_11195 PF00181 Ribosomal Proteins L2, RNA binding domain CL176_11200 PF00276 Ribosomal protein L23 CL176_11205 PF00573 Ribosomal protein L4/L1 family CL176_11210 PF00297 Ribosomal protein L3 CL176_11215 PF00338 Ribosomal protein S10p/S20e CL176_11220 PF04445 Putative SAM-dependent methyltransferase CL176_11225 PF02153 Prephenate dehydrogenase CL176_11230 PF00800 Prephenate dehydratase CL176_11230 PF01817 Chorismate mutase type II CL176_11230 PF01842 ACT domain CL176_11235 PF00005 ABC transporter CL176_11240 PF00528 Binding-protein-dependent transport system inner membrane component CL176_11245 PF05552 Conserved TM helix CL176_11250 PF03143 Elongation factor Tu C-terminal domain CL176_11250 PF00009 Elongation factor Tu GTP binding domain CL176_11250 PF03144 Elongation factor Tu domain 2 CL176_11255 PF00679 Elongation factor G C-terminus CL176_11255 PF03144 Elongation factor Tu domain 2 CL176_11255 PF00009 Elongation factor Tu GTP binding domain CL176_11255 PF03764 Elongation factor G, domain IV CL176_11255 PF14492 Elongation Factor G, domain II CL176_11260 PF00177 Ribosomal protein S7p/S5e CL176_11265 PF00164 Ribosomal protein S12/S23 CL176_11275 PF00005 ABC transporter CL176_11275 PF13732 Domain of unknown function (DUF4162) CL176_11285 PF00291 Pyridoxal-phosphate dependent enzyme CL176_11290 PF00132 Bacterial transferase hexapeptide (six repeats) CL176_11295 PF01336 OB-fold nucleic acid binding domain CL176_11295 PF00152 tRNA synthetases class II (D, K and N) CL176_11300 PF01430 Hsp33 protein CL176_11305 PF17862 AAA+ lid domain CL176_11305 PF00004 ATPase family associated with various cellular activities (AAA) CL176_11305 PF01434 Peptidase family M41 CL176_11305 PF06480 FtsH Extracellular CL176_11315 PF11734 TilS substrate C-terminal domain CL176_11315 PF01171 PP-loop family CL176_11320 PF00072 Response regulator receiver domain CL176_11320 PF00486 Transcriptional regulatory protein, C terminal CL176_11325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CL176_11325 PF00512 His Kinase A (phospho-acceptor) domain CL176_11325 PF00672 HAMP domain CL176_11325 PF18698 Histidine kinase sensor domain CL176_11325 PF00989 PAS fold CL176_11330 PF00575 S1 RNA binding domain CL176_11340 PF01479 S4 domain CL176_11345 PF02559 CarD-like/TRCF domain CL176_11345 PF00270 DEAD/DEAH box helicase CL176_11345 PF00271 Helicase conserved C-terminal domain CL176_11345 PF03461 TRCF domain CL176_11345 PF17757 UvrB interaction domain CL176_11350 PF01195 Peptidyl-tRNA hydrolase CL176_11355 PF06257 Biofilm formation stimulator VEG CL176_11360 PF00398 Ribosomal RNA adenine dimethylase CL176_11365 PF13331 Domain of unknown function (DUF4093) CL176_11370 PF01026 TatD related DNase CL176_11375 PF01588 Putative tRNA binding domain CL176_11375 PF09334 tRNA synthetases class I (M) CL176_11375 PF08264 Anticodon-binding domain of tRNA CL176_11380 PF00877 NlpC/P60 family CL176_11380 PF00877 NlpC/P60 family CL176_11385 PF00579 tRNA synthetases class I (W and Y) CL176_11385 PF01479 S4 domain CL176_11395 PF02525 Flavodoxin-like fold CL176_11400 PF00512 His Kinase A (phospho-acceptor) domain CL176_11400 PF00672 HAMP domain CL176_11400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CL176_11405 PF00486 Transcriptional regulatory protein, C terminal CL176_11405 PF00072 Response regulator receiver domain CL176_11410 PF00436 Single-strand binding protein family CL176_11415 PF10298 WhiA N-terminal LAGLIDADG-like domain CL176_11415 PF02650 WhiA C-terminal HTH domain CL176_11415 PF14527 WhiA LAGLIDADG-like domain CL176_11420 PF01933 Uncharacterised protein family UPF0052 CL176_11425 PF03668 P-loop ATPase protein family CL176_11430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CL176_11430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CL176_11430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CL176_11430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CL176_11435 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL176_11440 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CL176_11440 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CL176_11445 PF01790 Prolipoprotein diacylglyceryl transferase CL176_11450 PF07475 HPr Serine kinase C-terminal domain CL176_11450 PF02603 HPr Serine kinase N terminus CL176_11455 PF04024 PspC domain CL176_11465 PF00005 ABC transporter CL176_11465 PF17755 UvrA DNA-binding domain CL176_11465 PF17760 UvrA interaction domain CL176_11470 PF12849 PBP superfamily domain CL176_11475 PF01895 PhoU domain CL176_11480 PF00005 ABC transporter CL176_11485 PF00528 Binding-protein-dependent transport system inner membrane component CL176_11490 PF00528 Binding-protein-dependent transport system inner membrane component CL176_11495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CL176_11495 PF00512 His Kinase A (phospho-acceptor) domain CL176_11495 PF00989 PAS fold CL176_11495 PF16736 Single Cache-like CL176_11500 PF00486 Transcriptional regulatory protein, C terminal CL176_11500 PF00072 Response regulator receiver domain CL176_11505 PF02687 FtsX-like permease family CL176_11505 PF18075 FtsX extracellular domain CL176_11510 PF00005 ABC transporter CL176_11515 PF03462 PCRF domain CL176_11515 PF00472 RF-1 domain CL176_11520 PF07517 SecA DEAD-like domain CL176_11520 PF02810 SEC-C motif CL176_11520 PF07516 SecA Wing and Scaffold domain CL176_11520 PF01043 SecA preprotein cross-linking domain CL176_11525 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CL176_11525 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CL176_11535 PF04851 Type III restriction enzyme, res subunit CL176_11535 PF00271 Helicase conserved C-terminal domain CL176_11540 PF02645 Uncharacterised protein, DegV family COG1307 CL176_11545 PF00781 Diacylglycerol kinase catalytic domain CL176_11550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CL176_11550 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL176_11560 PF01156 Inosine-uridine preferring nucleoside hydrolase CL176_11565 PF00294 pfkB family carbohydrate kinase CL176_11570 PF01205 Uncharacterized protein family UPF0029 CL176_11570 PF09186 Domain of unknown function (DUF1949) CL176_11575 PF02645 Uncharacterised protein, DegV family COG1307 CL176_11580 PF00953 Glycosyl transferase family 4 CL176_11585 PF02540 NAD synthase CL176_11590 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CL176_11590 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CL176_11590 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CL176_11600 PF02397 Bacterial sugar transferase CL176_11605 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CL176_11605 PF14572 Phosphoribosyl synthetase-associated domain CL176_11610 PF00483 Nucleotidyl transferase CL176_11610 PF00132 Bacterial transferase hexapeptide (six repeats) CL176_11615 PF00156 Phosphoribosyl transferase domain CL176_11615 PF09182 Bacterial purine repressor, N-terminal CL176_11620 PF08125 Mannitol dehydrogenase C-terminal domain CL176_11620 PF01232 Mannitol dehydrogenase Rossmann domain CL176_11625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CL176_11630 PF05043 Mga helix-turn-helix domain CL176_11630 PF08279 HTH domain CL176_11630 PF00874 PRD domain CL176_11630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CL176_11630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CL176_11635 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CL176_11635 PF02378 Phosphotransferase system, EIIC CL176_11640 PF00950 ABC 3 transport family CL176_11645 PF00005 ABC transporter CL176_11650 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CL176_11655 PF10396 GTP-binding protein TrmE N-terminus CL176_11655 PF12631 MnmE helical domain CL176_11655 PF01926 50S ribosome-binding GTPase CL176_11660 PF04298 Putative neutral zinc metallopeptidase CL176_11665 PF01610 Transposase CL176_11665 PF13683 Integrase core domain CL176_11670 PF00005 ABC transporter CL176_11675 PF02653 Branched-chain amino acid transport system / permease component CL176_11700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CL176_11700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CL176_11710 PF00664 ABC transporter transmembrane region CL176_11710 PF00005 ABC transporter CL176_11715 PF00664 ABC transporter transmembrane region CL176_11715 PF00005 ABC transporter CL176_11725 PF13091 PLD-like domain CL176_11735 PF01022 Bacterial regulatory protein, arsR family CL176_11750 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CL176_11755 PF12833 Helix-turn-helix domain CL176_11760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CL176_11760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CL176_11760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CL176_11760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CL176_11770 PF02457 DisA bacterial checkpoint controller nucleotide-binding CL176_11775 PF01809 Putative membrane protein insertion efficiency factor CL176_11780 PF01321 Creatinase/Prolidase N-terminal domain CL176_11780 PF00557 Metallopeptidase family M24 CL176_11785 PF02237 Biotin protein ligase C terminal domain CL176_11785 PF08279 HTH domain CL176_11785 PF03099 Biotin/lipoate A/B protein ligase family CL176_11790 PF02632 BioY family CL176_11795 PF00248 Aldo/keto reductase family CL176_11800 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CL176_11800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CL176_11805 PF00294 pfkB family carbohydrate kinase CL176_11810 PF00455 DeoR C terminal sensor domain CL176_11810 PF08220 DeoR-like helix-turn-helix domain CL176_11815 PF00155 Aminotransferase class I and II CL176_11830 PF01610 Transposase CL176_11830 PF13683 Integrase core domain CL176_11860 PF06750 Bacterial Peptidase A24 N-terminal domain CL176_11860 PF01478 Type IV leader peptidase family CL176_11875 PF04998 RNA polymerase Rpb1, domain 5 CL176_11875 PF05000 RNA polymerase Rpb1, domain 4 CL176_11875 PF04983 RNA polymerase Rpb1, domain 3 CL176_11875 PF04997 RNA polymerase Rpb1, domain 1 CL176_11875 PF00623 RNA polymerase Rpb1, domain 2 CL176_11880 PF04563 RNA polymerase beta subunit CL176_11880 PF00562 RNA polymerase Rpb2, domain 6 CL176_11880 PF04561 RNA polymerase Rpb2, domain 2 CL176_11880 PF10385 RNA polymerase beta subunit external 1 domain CL176_11880 PF04565 RNA polymerase Rpb2, domain 3 CL176_11880 PF04560 RNA polymerase Rpb2, domain 7 CL176_11885 PF05175 Methyltransferase small domain CL176_11895 PF00542 Ribosomal protein L7/L12 C-terminal domain CL176_11895 PF16320 Ribosomal protein L7/L12 dimerisation domain CL176_11900 PF00466 Ribosomal protein L10 CL176_11905 PF00687 Ribosomal protein L1p/L10e family CL176_11910 PF03946 Ribosomal protein L11, N-terminal domain CL176_11910 PF00298 Ribosomal protein L11, RNA binding domain CL176_11915 PF00248 Aldo/keto reductase family CL176_11930 PF04205 FMN-binding domain CL176_11930 PF01794 Ferric reductase like transmembrane component CL176_11945 PF02357 Transcription termination factor nusG CL176_11945 PF00467 KOW motif CL176_11950 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CL176_11955 PF00471 Ribosomal protein L33 CL176_11965 PF05991 YacP-like NYN domain CL176_11970 PF00588 SpoU rRNA Methylase family CL176_11970 PF08032 RNA 2'-O ribose methyltransferase substrate binding CL176_11975 PF00636 Ribonuclease III domain CL176_11980 PF09190 DALR domain CL176_11980 PF01406 tRNA synthetases class I (C) catalytic domain CL176_11985 PF00749 tRNA synthetases class I (E and Q), catalytic domain CL176_11995 PF18073 Rubredoxin metal binding domain CL176_12000 PF00692 dUTPase CL176_12005 PF09154 Domain of unknown function (DUF1939) CL176_12005 PF00128 Alpha amylase, catalytic domain CL176_12010 PF03951 Glutamine synthetase, beta-Grasp domain CL176_12010 PF00120 Glutamine synthetase, catalytic domain CL176_12020 PF00772 DnaB-like helicase N terminal domain CL176_12020 PF03796 DnaB-like helicase C terminal domain CL176_12025 PF03948 Ribosomal protein L9, C-terminal domain CL176_12025 PF01281 Ribosomal protein L9, N-terminal domain CL176_12030 PF02272 DHHA1 domain CL176_12030 PF01368 DHH family CL176_12035 PF01084 Ribosomal protein S18 CL176_12040 PF00436 Single-strand binding protein family CL176_12045 PF01250 Ribosomal protein S6 CL176_12050 PF03989 DNA gyrase C-terminal domain, beta-propeller CL176_12050 PF00521 DNA gyrase/topoisomerase IV, subunit A CL176_12055 PF00986 DNA gyrase B subunit, carboxyl terminus CL176_12055 PF00204 DNA gyrase B CL176_12055 PF01751 Toprim domain CL176_12055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase