CL176_00015 SM00480 DNA polymerase III beta subunit CL176_00020 SM00382 ATPases associated with a variety of cellular activities CL176_00020 SM00760 Bacterial dnaA protein helix-turn-helix domain CL176_00040 SM00393 Putative single-stranded nucleic acids-binding domain CL176_00040 SM01245 CL176_00040 CL176_00065 SM01228 CL176_00065 CL176_00075 SM00345 helix_turn_helix gluconate operon transcriptional repressor CL176_00075 SM00895 CL176_00075 CL176_00105 SM00470 ParB-like nuclease domain CL176_00125 SM00116 Domain in cystathionine beta-synthase and other proteins. CL176_00125 SM01240 CL176_00125 CL176_00130 SM00448 cheY-homologous receiver domain CL176_00130 SM00862 Transcriptional regulatory protein, C terminal CL176_00135 SM00387 Histidine kinase-like ATPases CL176_00135 SM00388 His Kinase A (phosphoacceptor) domain CL176_00150 SM00257 Lysin motif CL176_00165 SM00382 ATPases associated with a variety of cellular activities CL176_00190 SM00382 ATPases associated with a variety of cellular activities CL176_00190 SM01086 C-terminal, D2-small domain, of ClpB protein CL176_00230 SM00382 ATPases associated with a variety of cellular activities CL176_00240 SM00493 CL176_00240 CL176_00320 SM00382 ATPases associated with a variety of cellular activities CL176_00320 SM00930 CL176_00320 CL176_00330 SM00098 Alkaline phosphatase homologues CL176_00360 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CL176_00400 SM00382 ATPases associated with a variety of cellular activities CL176_00420 SM00421 helix_turn_helix, Lux Regulon CL176_00420 SM00448 cheY-homologous receiver domain CL176_00435 SM00382 ATPases associated with a variety of cellular activities CL176_00465 SM00382 ATPases associated with a variety of cellular activities CL176_00510 SM00357 Cold shock protein domain CL176_00510 SM00382 ATPases associated with a variety of cellular activities CL176_00510 SM00959 Rho termination factor, N-terminal domain CL176_00545 SM00116 Domain in cystathionine beta-synthase and other proteins. CL176_00545 SM00382 ATPases associated with a variety of cellular activities CL176_00560 SM00900 CL176_00560 CL176_00575 SM00829 Enoylreductase CL176_00585 SM00841 Elongation factor P, C-terminal CL176_00585 SM01185 CL176_00585 CL176_00640 SM00487 DEAD-like helicases superfamily CL176_00640 SM00490 helicase superfamily c-terminal domain CL176_00650 SM01005 Alanine racemase, C-terminal domain CL176_00655 SM00849 Metallo-beta-lactamase superfamily CL176_00665 SM01091 Transporter associated domain CL176_00685 SM00448 cheY-homologous receiver domain CL176_00685 SM00862 Transcriptional regulatory protein, C terminal CL176_00690 SM00091 PAS domain CL176_00690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CL176_00690 SM00387 Histidine kinase-like ATPases CL176_00690 SM00388 His Kinase A (phosphoacceptor) domain CL176_00710 SM00849 Metallo-beta-lactamase superfamily CL176_00715 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CL176_00775 SM00946 Prolyl-tRNA synthetase, C-terminal CL176_00805 SM00382 ATPases associated with a variety of cellular activities CL176_00810 SM00849 Metallo-beta-lactamase superfamily CL176_00815 SM00881 CoA binding domain CL176_00820 SM00883 Chaperonin 10 Kd subunit CL176_00865 SM00984 UDP binding domain CL176_00885 SM00257 Lysin motif CL176_00920 SM00382 ATPases associated with a variety of cellular activities CL176_00960 SM00984 UDP binding domain CL176_00970 SM00530 Helix-turn-helix XRE-family like proteins CL176_01005 SM00382 ATPases associated with a variety of cellular activities CL176_01110 SM00257 Lysin motif CL176_01220 SM00530 Helix-turn-helix XRE-family like proteins CL176_01280 SM00478 endonuclease III CL176_01285 SM00448 cheY-homologous receiver domain CL176_01320 SM00382 ATPases associated with a variety of cellular activities CL176_01340 SM00900 CL176_01340 CL176_01415 SM00530 Helix-turn-helix XRE-family like proteins CL176_01425 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CL176_01425 SM00387 Histidine kinase-like ATPases CL176_01430 SM00448 cheY-homologous receiver domain CL176_01430 SM00850 LytTr DNA-binding domain CL176_01445 SM01208 CL176_01445 CL176_01465 SM00382 ATPases associated with a variety of cellular activities CL176_01495 SM00155 Phospholipase D. Active site motifs. CL176_01510 SM00047 Lysozyme subfamily 2 CL176_01525 SM00292 breast cancer carboxy-terminal domain CL176_01525 SM00532 Ligase N family CL176_01545 SM00845 GatB domain CL176_01565 SM00798 AICARFT/IMPCHase bienzyme CL176_01565 SM00851 MGS-like domain CL176_01570 SM01209 CL176_01570 CL176_01570 SM01210 CL176_01570 CL176_01575 SM01001 AIR carboxylase CL176_01590 SM01211 CL176_01590 CL176_01610 SM00465 GIY-YIG type nucleases (URI domain) CL176_01745 SM00478 endonuclease III CL176_01750 SM00382 ATPases associated with a variety of cellular activities CL176_01755 SM00382 ATPases associated with a variety of cellular activities CL176_01770 SM00642 Alpha-amylase domain CL176_01795 SM00382 ATPases associated with a variety of cellular activities CL176_01800 SM00382 ATPases associated with a variety of cellular activities CL176_01820 SM00382 ATPases associated with a variety of cellular activities CL176_01840 SM00861 Transketolase, pyrimidine binding domain CL176_01870 SM01120 CL176_01870 CL176_01900 SM00345 helix_turn_helix gluconate operon transcriptional repressor CL176_01900 SM00420 helix_turn_helix, Deoxyribose operon repressor CL176_01900 SM01134 CL176_01900 CL176_01910 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CL176_01930 SM00354 helix_turn _helix lactose operon repressor CL176_02000 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CL176_02010 SM01007 Class II Aldolase and Adducin N-terminal domain CL176_02020 SM00354 helix_turn _helix lactose operon repressor CL176_02025 SM00047 Lysozyme subfamily 2 CL176_02025 SM00644 CL176_02025 CL176_02100 SM00959 Rho termination factor, N-terminal domain CL176_02220 SM00530 Helix-turn-helix XRE-family like proteins CL176_02230 SM00530 Helix-turn-helix XRE-family like proteins CL176_02245 SM00530 Helix-turn-helix XRE-family like proteins CL176_02255 SM00530 Helix-turn-helix XRE-family like proteins CL176_02280 SM00857 Resolvase, N terminal domain CL176_02295 SM00382 ATPases associated with a variety of cellular activities CL176_02410 SM00420 helix_turn_helix, Deoxyribose operon repressor CL176_02410 SM01134 CL176_02410 CL176_02420 SM00382 ATPases associated with a variety of cellular activities CL176_02465 SM00829 Enoylreductase CL176_02470 SM01133 CL176_02470 CL176_02520 SM00900 CL176_02520 CL176_02525 SM00900 CL176_02525 CL176_02560 SM00861 Transketolase, pyrimidine binding domain CL176_02625 SM01400 CL176_02625 CL176_02665 SM00420 helix_turn_helix, Deoxyribose operon repressor CL176_02665 SM01134 CL176_02665 CL176_02795 SM00382 ATPases associated with a variety of cellular activities CL176_02880 SM00382 ATPases associated with a variety of cellular activities CL176_02925 SM00831 Cation transporter/ATPase, N-terminus CL176_02975 SM01329 CL176_02975 CL176_02980 SM00849 Metallo-beta-lactamase superfamily CL176_02985 SM00382 ATPases associated with a variety of cellular activities CL176_03005 SM00382 ATPases associated with a variety of cellular activities CL176_03030 SM00062 Bacterial periplasmic substrate-binding proteins CL176_03050 SM00900 CL176_03050 CL176_03085 SM00382 ATPases associated with a variety of cellular activities CL176_03215 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CL176_03215 SM00474 3'-5' exonuclease CL176_03215 SM00475 5'-3' exonuclease CL176_03215 SM00482 DNA polymerase A domain CL176_03220 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CL176_03220 SM01232 CL176_03220 CL176_03245 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CL176_03260 SM00986 Uracil DNA glycosylase superfamily CL176_03260 SM00987 UreE urease accessory protein, C-terminal domain CL176_03275 SM00382 ATPases associated with a variety of cellular activities CL176_03280 SM00382 ATPases associated with a variety of cellular activities CL176_03295 SM00382 ATPases associated with a variety of cellular activities CL176_03355 SM00116 Domain in cystathionine beta-synthase and other proteins. CL176_03355 SM00924 MgtE intracellular N domain CL176_03365 SM00530 Helix-turn-helix XRE-family like proteins CL176_03410 SM01103 CL176_03410 CL176_03420 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CL176_03470 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CL176_03490 SM01192 CL176_03490 CL176_03490 SM01193 CL176_03490 CL176_03500 SM00257 Lysin motif CL176_03520 SM00316 Ribosomal protein S1-like RNA-binding domain CL176_03520 SM00955 CL176_03520 CL176_03535 SM00849 Metallo-beta-lactamase superfamily CL176_03610 SM00363 S4 RNA-binding domain CL176_03640 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CL176_03645 SM00347 helix_turn_helix multiple antibiotic resistance protein CL176_03665 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CL176_03670 SM00822 CL176_03670 CL176_03675 SM00825 Beta-ketoacyl synthase CL176_03690 SM00878 Biotin carboxylase C-terminal domain CL176_03710 SM00861 Transketolase, pyrimidine binding domain CL176_03755 SM00382 ATPases associated with a variety of cellular activities CL176_03780 SM00838 Elongation factor G C-terminus CL176_03815 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CL176_03820 SM00849 Metallo-beta-lactamase superfamily CL176_03830 SM00382 ATPases associated with a variety of cellular activities CL176_03835 SM00062 Bacterial periplasmic substrate-binding proteins CL176_03835 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CL176_03855 SM00347 helix_turn_helix multiple antibiotic resistance protein CL176_03870 SM00903 Flavin reductase like domain CL176_03975 SM00316 Ribosomal protein S1-like RNA-binding domain CL176_04100 SM00836 DALR anticodon binding domain CL176_04215 SM00382 ATPases associated with a variety of cellular activities CL176_04320 SM00047 Lysozyme subfamily 2 CL176_04320 SM00257 Lysin motif CL176_04335 SM00363 S4 RNA-binding domain CL176_04450 SM00487 DEAD-like helicases superfamily CL176_04450 SM00490 helicase superfamily c-terminal domain CL176_04475 SM01101 CL176_04475 CL176_04485 SM00479 CL176_04485 CL176_04560 SM00382 ATPases associated with a variety of cellular activities CL176_04590 SM00967 RNA 2'-O ribose methyltransferase substrate binding CL176_04605 SM00873 B3/4 domain CL176_04605 SM00874 tRNA synthetase B5 domain CL176_04605 SM00896 Ferredoxin-fold anticodon binding domain CL176_04610 SM00345 helix_turn_helix gluconate operon transcriptional repressor CL176_04650 SM00463 Small MutS-related domain CL176_04650 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CL176_04650 SM00534 ATPase domain of DNA mismatch repair MUTS family CL176_04660 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CL176_04660 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CL176_04715 SM00354 helix_turn _helix lactose operon repressor CL176_04735 SM00357 Cold shock protein domain CL176_04765 SM00382 ATPases associated with a variety of cellular activities CL176_04815 SM00268 Actin CL176_04830 SM00062 Bacterial periplasmic substrate-binding proteins CL176_04855 SM00900 CL176_04855 CL176_04890 SM00855 Phosphoglycerate mutase family CL176_04915 SM00642 Alpha-amylase domain CL176_04920 SM00382 ATPases associated with a variety of cellular activities CL176_04920 SM01086 C-terminal, D2-small domain, of ClpB protein CL176_04935 SM00861 Transketolase, pyrimidine binding domain CL176_04970 SM00358 Double-stranded RNA binding motif CL176_04970 SM00535 Ribonuclease III family CL176_04975 SM00968 SMC proteins Flexible Hinge Domain CL176_04985 SM00382 ATPases associated with a variety of cellular activities CL176_04985 SM00962 SRP54-type protein, GTPase domain CL176_04985 SM00963 SRP54-type protein, helical bundle domain CL176_05000 SM01120 CL176_05000 CL176_05000 SM01121 CL176_05000 CL176_05005 SM00487 DEAD-like helicases superfamily CL176_05005 SM00490 helicase superfamily c-terminal domain CL176_05035 SM00382 ATPases associated with a variety of cellular activities CL176_05055 SM00382 ATPases associated with a variety of cellular activities CL176_05085 SM00829 Enoylreductase CL176_05105 SM00046 Diacylglycerol kinase catalytic domain (presumed) CL176_05110 SM00382 ATPases associated with a variety of cellular activities CL176_05145 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CL176_05155 SM00732 Likely ribonuclease with RNase H fold. CL176_05200 SM00830 Chorismate mutase type II CL176_05210 SM00387 Histidine kinase-like ATPases CL176_05215 SM00421 helix_turn_helix, Lux Regulon CL176_05215 SM00448 cheY-homologous receiver domain CL176_05240 SM00851 MGS-like domain CL176_05245 SM00382 ATPases associated with a variety of cellular activities CL176_05245 SM01086 C-terminal, D2-small domain, of ClpB protein CL176_05320 SM00900 CL176_05320 CL176_05340 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CL176_05345 SM00479 CL176_05345 CL176_05345 SM00481 DNA polymerase alpha chain like domain CL176_05360 SM00316 Ribosomal protein S1-like RNA-binding domain CL176_05360 SM00322 K homology RNA-binding domain CL176_05390 SM00904 Riboflavin kinase CL176_05410 SM00271 DnaJ molecular chaperone homology domain CL176_05415 SM00838 Elongation factor G C-terminus CL176_05430 SM00450 Rhodanese Homology Domain CL176_05510 SM00382 ATPases associated with a variety of cellular activities CL176_05515 SM00345 helix_turn_helix gluconate operon transcriptional repressor CL176_05555 SM00382 ATPases associated with a variety of cellular activities CL176_05585 SM00857 Resolvase, N terminal domain CL176_05625 SM00530 Helix-turn-helix XRE-family like proteins CL176_05640 SM00382 ATPases associated with a variety of cellular activities CL176_05680 SM00650 Ribosomal RNA adenine dimethylases CL176_05760 SM00470 ParB-like nuclease domain CL176_05770 SM00382 ATPases associated with a variety of cellular activities CL176_05825 SM00646 CL176_05825 CL176_05830 SM00257 Lysin motif CL176_05840 SM00257 Lysin motif CL176_05865 SM00854 Bacterial capsule synthesis protein PGA_cap CL176_05870 SM00878 Biotin carboxylase C-terminal domain CL176_05875 SM00318 Staphylococcal nuclease homologues CL176_05890 SM00342 helix_turn_helix, arabinose operon control protein CL176_05895 SM00382 ATPases associated with a variety of cellular activities CL176_05915 SM01131 CL176_05915 CL176_05920 SM00434 DNA Topoisomerase IV CL176_05925 SM00387 Histidine kinase-like ATPases CL176_05925 SM00433 TopoisomeraseII CL176_05930 SM01207 CL176_05930 CL176_05940 SM00382 ATPases associated with a variety of cellular activities CL176_05940 SM01086 C-terminal, D2-small domain, of ClpB protein CL176_05960 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CL176_05960 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CL176_05960 SM00493 CL176_05960 CL176_05985 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CL176_05985 SM00245 tail specific protease CL176_06000 SM00014 Acid phosphatase homologues CL176_06015 SM00382 ATPases associated with a variety of cellular activities CL176_06020 SM00986 Uracil DNA glycosylase superfamily CL176_06020 SM00987 UreE urease accessory protein, C-terminal domain CL176_06045 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CL176_06060 SM00220 Serine/Threonine protein kinases, catalytic domain CL176_06060 SM00740 CL176_06060 CL176_06065 SM00331 Sigma factor PP2C-like phosphatases CL176_06065 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CL176_06080 SM00487 DEAD-like helicases superfamily CL176_06080 SM00490 helicase superfamily c-terminal domain CL176_06085 SM01409 CL176_06085 CL176_06090 SM00072 Guanylate kinase homologues. CL176_06150 SM00849 Metallo-beta-lactamase superfamily CL176_06195 SM00862 Transcriptional regulatory protein, C terminal CL176_06240 SM00316 Ribosomal protein S1-like RNA-binding domain CL176_06240 SM00322 K homology RNA-binding domain CL176_06255 SM00382 ATPases associated with a variety of cellular activities CL176_06275 SM01387 CL176_06275 CL176_06285 SM00487 DEAD-like helicases superfamily CL176_06285 SM00490 helicase superfamily c-terminal domain CL176_06320 SM00855 Phosphoglycerate mutase family CL176_06350 SM00062 Bacterial periplasmic substrate-binding proteins CL176_06355 SM00382 ATPases associated with a variety of cellular activities CL176_06395 SM01130 CL176_06395 CL176_06425 SM00859 Semialdehyde dehydrogenase, NAD binding domain CL176_06465 SM00382 ATPases associated with a variety of cellular activities CL176_06475 SM00481 DNA polymerase alpha chain like domain CL176_06490 SM00382 ATPases associated with a variety of cellular activities CL176_06505 SM00927 DNA mismatch repair enzyme MutH CL176_06550 SM00900 CL176_06550 CL176_06590 SM00341 Helicase and RNase D C-terminal CL176_06590 SM00487 DEAD-like helicases superfamily CL176_06590 SM00490 helicase superfamily c-terminal domain CL176_06590 SM00956 CL176_06590 CL176_06640 SM00382 ATPases associated with a variety of cellular activities CL176_06655 SM00382 ATPases associated with a variety of cellular activities CL176_06655 SM00962 SRP54-type protein, GTPase domain CL176_06655 SM00963 SRP54-type protein, helical bundle domain CL176_06665 SM00347 helix_turn_helix multiple antibiotic resistance protein CL176_06665 SM00529 Helix-turn-helix diphteria tox regulatory element CL176_06700 SM00900 CL176_06700 CL176_06745 SM00900 CL176_06745 CL176_06750 SM00354 helix_turn _helix lactose operon repressor CL176_06755 SM00640 Glycosyl hydrolases family 32 CL176_06770 SM00640 Glycosyl hydrolases family 32 CL176_06780 SM00354 helix_turn _helix lactose operon repressor CL176_06795 SM00382 ATPases associated with a variety of cellular activities CL176_06835 SM00900 CL176_06835 CL176_06865 SM00900 CL176_06865 CL176_06915 SM00062 Bacterial periplasmic substrate-binding proteins CL176_07000 SM00382 ATPases associated with a variety of cellular activities CL176_07015 SM00530 Helix-turn-helix XRE-family like proteins CL176_07200 SM00382 ATPases associated with a variety of cellular activities CL176_07205 SM00382 ATPases associated with a variety of cellular activities CL176_07230 SM00382 ATPases associated with a variety of cellular activities CL176_07235 SM00382 ATPases associated with a variety of cellular activities CL176_07260 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CL176_07310 SM00363 S4 RNA-binding domain CL176_07360 SM00345 helix_turn_helix gluconate operon transcriptional repressor CL176_07370 SM00400 zinc finger CL176_07370 SM00493 CL176_07370 CL176_07380 SM00382 ATPases associated with a variety of cellular activities CL176_07380 SM00994 ClpX C4-type zinc finger CL176_07380 SM01086 C-terminal, D2-small domain, of ClpB protein CL176_07415 SM00478 endonuclease III CL176_07430 SM00479 CL176_07430 CL176_07450 SM00411 bacterial (prokaryotic) histone like domain CL176_07460 SM00316 Ribosomal protein S1-like RNA-binding domain CL176_07470 SM00257 Lysin motif CL176_07480 SM00363 S4 RNA-binding domain CL176_07530 SM00481 DNA polymerase alpha chain like domain CL176_07540 SM00382 ATPases associated with a variety of cellular activities CL176_07545 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CL176_07555 SM00853 MutL C terminal dimerisation domain CL176_07555 SM01340 CL176_07555 CL176_07560 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CL176_07560 SM00534 ATPase domain of DNA mismatch repair MUTS family CL176_07570 SM00382 ATPases associated with a variety of cellular activities CL176_07590 SM00322 K homology RNA-binding domain CL176_07590 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CL176_07595 SM00382 ATPases associated with a variety of cellular activities CL176_07600 SM00852 Probable molybdopterin binding domain CL176_07640 SM00382 ATPases associated with a variety of cellular activities CL176_07650 SM00843 CL176_07650 CL176_07665 SM00387 Histidine kinase-like ATPases CL176_07665 SM00388 His Kinase A (phosphoacceptor) domain CL176_07670 SM00448 cheY-homologous receiver domain CL176_07670 SM00862 Transcriptional regulatory protein, C terminal CL176_07675 SM01350 CL176_07675 CL176_07680 SM00450 Rhodanese Homology Domain CL176_07750 SM00487 DEAD-like helicases superfamily CL176_07750 SM00490 helicase superfamily c-terminal domain CL176_07765 SM00116 Domain in cystathionine beta-synthase and other proteins. CL176_07775 SM01323 CL176_07775 CL176_07790 SM00563 Phosphate acyltransferases CL176_07825 SM00822 CL176_07825 CL176_07875 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CL176_07905 SM00518 AP endonuclease family 2 CL176_07925 SM00382 ATPases associated with a variety of cellular activities CL176_07930 SM00287 Bacterial SH3 domain homologues CL176_07930 SM00646 CL176_07930 CL176_07940 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CL176_07940 SM00954 Region found in RelA / SpoT proteins CL176_07950 SM01133 CL176_07950 CL176_07980 SM00981 CL176_07980 CL176_08000 SM00046 Diacylglycerol kinase catalytic domain (presumed) CL176_08005 SM00450 Rhodanese Homology Domain CL176_08025 SM00859 Semialdehyde dehydrogenase, NAD binding domain CL176_08050 SM00981 CL176_08050 CL176_08070 SM00363 S4 RNA-binding domain CL176_08070 SM01390 CL176_08070 CL176_08075 SM00382 ATPases associated with a variety of cellular activities CL176_08125 SM00363 S4 RNA-binding domain CL176_08135 SM00864 Tubulin/FtsZ family, GTPase domain CL176_08135 SM00865 Tubulin/FtsZ family, C-terminal domain CL176_08140 SM00842 Cell division protein FtsA CL176_08240 SM00937 CL176_08240 CL176_08395 SM00642 Alpha-amylase domain CL176_08460 SM00062 Bacterial periplasmic substrate-binding proteins CL176_08465 SM00382 ATPases associated with a variety of cellular activities CL176_08495 SM00327 von Willebrand factor (vWF) type A domain CL176_08570 SM00382 ATPases associated with a variety of cellular activities CL176_08575 SM00062 Bacterial periplasmic substrate-binding proteins CL176_08620 SM00382 ATPases associated with a variety of cellular activities CL176_08650 SM00382 ATPases associated with a variety of cellular activities CL176_08785 SM00842 Cell division protein FtsA CL176_08820 SM00877 CL176_08820 CL176_08830 SM00877 CL176_08830 CL176_08835 SM00877 CL176_08835 CL176_08855 SM00387 Histidine kinase-like ATPases CL176_08880 SM00877 CL176_08880 CL176_08900 SM00382 ATPases associated with a variety of cellular activities CL176_08930 SM01004 Delta-aminolevulinic acid dehydratase CL176_09040 SM00382 ATPases associated with a variety of cellular activities CL176_09070 SM00506 Appr-1"-p processing enzyme CL176_09125 SM00729 Elongator protein 3, MiaB family, Radical SAM CL176_09190 SM00450 Rhodanese Homology Domain CL176_09205 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CL176_09230 SM00450 Rhodanese Homology Domain CL176_09270 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CL176_09275 SM00905 Dihydroneopterin aldolase CL176_09300 SM00382 ATPases associated with a variety of cellular activities CL176_09305 SM00342 helix_turn_helix, arabinose operon control protein CL176_09385 SM01038 Beta galactosidase small chain CL176_09415 SM00342 helix_turn_helix, arabinose operon control protein CL176_09515 SM00420 helix_turn_helix, Deoxyribose operon repressor CL176_09545 SM00047 Lysozyme subfamily 2 CL176_09545 SM00257 Lysin motif CL176_09575 SM00487 DEAD-like helicases superfamily CL176_09575 SM00490 helicase superfamily c-terminal domain CL176_09595 SM00422 helix_turn_helix, mercury resistance CL176_09620 SM00245 tail specific protease CL176_09630 SM00382 ATPases associated with a variety of cellular activities CL176_09635 SM00345 helix_turn_helix gluconate operon transcriptional repressor CL176_09650 SM00387 Histidine kinase-like ATPases CL176_09650 SM00388 His Kinase A (phosphoacceptor) domain CL176_09755 SM00387 Histidine kinase-like ATPases CL176_09755 SM00388 His Kinase A (phosphoacceptor) domain CL176_09785 SM00382 ATPases associated with a variety of cellular activities CL176_09790 SM00448 cheY-homologous receiver domain CL176_09790 SM00862 Transcriptional regulatory protein, C terminal CL176_09820 SM00382 ATPases associated with a variety of cellular activities CL176_09830 SM00487 DEAD-like helicases superfamily CL176_09830 SM00490 helicase superfamily c-terminal domain CL176_09850 SM00400 zinc finger CL176_09890 SM00530 Helix-turn-helix XRE-family like proteins CL176_09930 SM00530 Helix-turn-helix XRE-family like proteins CL176_09950 SM00382 ATPases associated with a variety of cellular activities CL176_09985 SM00382 ATPases associated with a variety of cellular activities CL176_10000 SM00530 Helix-turn-helix XRE-family like proteins CL176_10010 SM00889 Elongation factor G, domain IV CL176_10050 SM00347 helix_turn_helix multiple antibiotic resistance protein CL176_10090 SM01060 CL176_10090 CL176_10120 SM00854 Bacterial capsule synthesis protein PGA_cap CL176_10130 SM01266 CL176_10130 CL176_10135 SM00479 CL176_10135 CL176_10155 SM00900 CL176_10155 CL176_10170 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CL176_10180 SM00382 ATPases associated with a variety of cellular activities CL176_10255 SM00382 ATPases associated with a variety of cellular activities CL176_10385 SM00316 Ribosomal protein S1-like RNA-binding domain CL176_10385 SM00732 Likely ribonuclease with RNase H fold. CL176_10390 SM00257 Lysin motif CL176_10395 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CL176_10475 SM01240 CL176_10475 CL176_10510 SM00836 DALR anticodon binding domain CL176_10510 SM01016 Arginyl tRNA synthetase N terminal dom CL176_10525 SM00831 Cation transporter/ATPase, N-terminus CL176_10570 SM00226 Low molecular weight phosphatase family CL176_10595 SM00382 ATPases associated with a variety of cellular activities CL176_10600 SM00382 ATPases associated with a variety of cellular activities CL176_10630 SM00642 Alpha-amylase domain CL176_10645 SM00530 Helix-turn-helix XRE-family like proteins CL176_10660 SM00382 ATPases associated with a variety of cellular activities CL176_10680 SM00421 helix_turn_helix, Lux Regulon CL176_10680 SM00448 cheY-homologous receiver domain CL176_10695 SM00382 ATPases associated with a variety of cellular activities CL176_10740 SM00530 Helix-turn-helix XRE-family like proteins CL176_10745 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CL176_10765 SM00382 ATPases associated with a variety of cellular activities CL176_10850 SM00382 ATPases associated with a variety of cellular activities CL176_10870 SM00116 Domain in cystathionine beta-synthase and other proteins. CL176_10875 SM00382 ATPases associated with a variety of cellular activities CL176_10880 SM00382 ATPases associated with a variety of cellular activities CL176_10925 SM01329 CL176_10925 CL176_10930 SM00917 LeuA allosteric (dimerisation) domain CL176_10955 SM00382 ATPases associated with a variety of cellular activities CL176_10960 SM00345 helix_turn_helix gluconate operon transcriptional repressor CL176_10965 SM00100 Cyclic nucleotide-monophosphate binding domain CL176_10965 SM00419 helix_turn_helix, cAMP Regulatory protein CL176_10975 SM00855 Phosphoglycerate mutase family CL176_10985 SM00382 ATPases associated with a variety of cellular activities CL176_11015 SM00478 endonuclease III CL176_11065 SM00382 ATPases associated with a variety of cellular activities CL176_11070 SM00382 ATPases associated with a variety of cellular activities CL176_11080 SM00662 RNA polymerases D CL176_11100 SM00316 Ribosomal protein S1-like RNA-binding domain CL176_11155 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CL176_11160 SM01374 CL176_11160 CL176_11180 SM00322 K homology RNA-binding domain CL176_11195 SM01382 CL176_11195 CL176_11195 SM01383 CL176_11195 CL176_11215 SM01403 CL176_11215 CL176_11235 SM00382 ATPases associated with a variety of cellular activities CL176_11240 SM00062 Bacterial periplasmic substrate-binding proteins CL176_11255 SM00838 Elongation factor G C-terminus CL176_11255 SM00889 Elongation factor G, domain IV CL176_11275 SM00382 ATPases associated with a variety of cellular activities CL176_11305 SM00382 ATPases associated with a variety of cellular activities CL176_11315 SM00977 TilS substrate C-terminal domain CL176_11320 SM00448 cheY-homologous receiver domain CL176_11320 SM00862 Transcriptional regulatory protein, C terminal CL176_11325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CL176_11325 SM00387 Histidine kinase-like ATPases CL176_11325 SM00388 His Kinase A (phosphoacceptor) domain CL176_11330 SM00316 Ribosomal protein S1-like RNA-binding domain CL176_11340 SM00363 S4 RNA-binding domain CL176_11345 SM00487 DEAD-like helicases superfamily CL176_11345 SM00490 helicase superfamily c-terminal domain CL176_11345 SM00982 CL176_11345 CL176_11345 SM01058 CarD-like/TRCF domain CL176_11360 SM00650 Ribosomal RNA adenine dimethylases CL176_11365 SM00493 CL176_11365 CL176_11385 SM00363 S4 RNA-binding domain CL176_11400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CL176_11400 SM00387 Histidine kinase-like ATPases CL176_11400 SM00388 His Kinase A (phosphoacceptor) domain CL176_11405 SM00448 cheY-homologous receiver domain CL176_11405 SM00862 Transcriptional regulatory protein, C terminal CL176_11465 SM00382 ATPases associated with a variety of cellular activities CL176_11480 SM00382 ATPases associated with a variety of cellular activities CL176_11495 SM00091 PAS domain CL176_11495 SM00387 Histidine kinase-like ATPases CL176_11495 SM00388 His Kinase A (phosphoacceptor) domain CL176_11500 SM00448 cheY-homologous receiver domain CL176_11500 SM00862 Transcriptional regulatory protein, C terminal CL176_11510 SM00382 ATPases associated with a variety of cellular activities CL176_11515 SM00937 CL176_11515 CL176_11520 SM00957 SecA DEAD-like domain CL176_11520 SM00958 SecA preprotein cross-linking domain CL176_11535 SM00487 DEAD-like helicases superfamily CL176_11535 SM00490 helicase superfamily c-terminal domain CL176_11545 SM00046 Diacylglycerol kinase catalytic domain (presumed) CL176_11605 SM01400 CL176_11605 CL176_11645 SM00382 ATPases associated with a variety of cellular activities CL176_11670 SM00382 ATPases associated with a variety of cellular activities CL176_11710 SM00382 ATPases associated with a variety of cellular activities CL176_11715 SM00382 ATPases associated with a variety of cellular activities CL176_11725 SM00155 Phospholipase D. Active site motifs. CL176_11735 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CL176_11755 SM00342 helix_turn_helix, arabinose operon control protein CL176_11775 SM01234 CL176_11775 CL176_11810 SM00420 helix_turn_helix, Deoxyribose operon repressor CL176_11810 SM01134 CL176_11810 CL176_11865 SM00849 Metallo-beta-lactamase superfamily CL176_11875 SM00663 RNA polymerase I subunit A N-terminus CL176_11910 SM00649 Ribosomal protein L11/L12 CL176_11930 SM00900 CL176_11930 CL176_11945 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CL176_11945 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CL176_11970 SM00967 RNA 2'-O ribose methyltransferase substrate binding CL176_11975 SM00535 Ribonuclease III family CL176_11980 SM00840 CL176_11980 CL176_11990 SM00670 Large family of predicted nucleotide-binding domains CL176_11995 SM00382 ATPases associated with a variety of cellular activities CL176_12005 SM00642 Alpha-amylase domain CL176_12010 SM01230 CL176_12010 CL176_12030 SM00267 diguanylate cyclase CL176_12050 SM00434 DNA Topoisomerase IV CL176_12055 SM00387 Histidine kinase-like ATPases CL176_12055 SM00433 TopoisomeraseII