locus-tag	class	description
AVP_116	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AVP_118	COG0419	ATPase involved in DNA repair
AVP_128	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AVP_128	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AVP_135	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AVP_39	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AVP_48	COG1418	mRNA catabolic process
AVP_49	COG1428	Deoxynucleoside kinase
AVP_59	COG1435	thymidine kinase activity
AVP_60	COG1388	LysM domain
AVP_60	COG3942	CHAP domain
AVP_85	COG5263	repeat protein
AVP_85	COG4193	domain, Protein
AVP_86	COG0739	heme binding
AVP_87	COG0791	NLP P60 protein
AVP_87	COG3883	PFAM NLP P60 protein
AVP_98	COG1388	LysM domain
AVP_98	COG1705	Flagellar rod assembly protein muramidase FlgJ