locus-tag class description HMPREF9243_0001 PF00308 Bacterial dnaA protein HMPREF9243_0001 PF08299 Bacterial dnaA protein helix-turn-helix HMPREF9243_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain HMPREF9243_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain HMPREF9243_0002 PF02767 DNA polymerase III beta subunit, central domain HMPREF9243_0004 PF02913 FAD linked oxidases, C-terminal domain HMPREF9243_0004 PF01565 FAD binding domain HMPREF9243_0006 PF02463 RecF/RecN/SMC N terminal domain HMPREF9243_0007 PF00204 DNA gyrase B HMPREF9243_0007 PF00986 DNA gyrase B subunit, carboxyl terminus HMPREF9243_0007 PF01751 Toprim domain HMPREF9243_0007 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9243_0008 PF03989 DNA gyrase C-terminal domain, beta-propeller HMPREF9243_0008 PF00521 DNA gyrase/topoisomerase IV, subunit A HMPREF9243_0009 PF00005 ABC transporter HMPREF9243_0009 PF13732 Domain of unknown function (DUF4162) HMPREF9243_0013 PF17763 Glutaminase/Asparaginase C-terminal domain HMPREF9243_0013 PF00710 Asparaginase, N-terminal HMPREF9243_0014 PF03606 C4-dicarboxylate anaerobic carrier HMPREF9243_0015 PF07687 Peptidase dimerisation domain HMPREF9243_0015 PF01546 Peptidase family M20/M25/M40 HMPREF9243_0016 PF01250 Ribosomal protein S6 HMPREF9243_0017 PF00436 Single-strand binding protein family HMPREF9243_0018 PF01084 Ribosomal protein S18 HMPREF9243_0021 PF02272 DHHA1 domain HMPREF9243_0021 PF01368 DHH family HMPREF9243_0022 PF00005 ABC transporter HMPREF9243_0023 PF03649 Uncharacterised protein family (UPF0014) HMPREF9243_0024 PF03649 Uncharacterised protein family (UPF0014) HMPREF9243_0025 PF01281 Ribosomal protein L9, N-terminal domain HMPREF9243_0025 PF03948 Ribosomal protein L9, C-terminal domain HMPREF9243_0026 PF00772 DnaB-like helicase N terminal domain HMPREF9243_0026 PF03796 DnaB-like helicase C terminal domain HMPREF9243_0028 PF00465 Iron-containing alcohol dehydrogenase HMPREF9243_0031 PF01546 Peptidase family M20/M25/M40 HMPREF9243_0031 PF07687 Peptidase dimerisation domain HMPREF9243_0032 PF00291 Pyridoxal-phosphate dependent enzyme HMPREF9243_0033 PF00764 Arginosuccinate synthase HMPREF9243_0035 PF01979 Amidohydrolase family HMPREF9243_0037 PF00857 Isochorismatase family HMPREF9243_0044 PF13276 HTH-like domain HMPREF9243_0044 PF00665 Integrase core domain HMPREF9243_0044 PF13333 Integrase core domain HMPREF9243_0045 PF01546 Peptidase family M20/M25/M40 HMPREF9243_0045 PF07687 Peptidase dimerisation domain HMPREF9243_0054 PF01053 Cys/Met metabolism PLP-dependent enzyme HMPREF9243_0055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HMPREF9243_0055 PF03466 LysR substrate binding domain HMPREF9243_0058 PF01809 Putative membrane protein insertion efficiency factor HMPREF9243_0059 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HMPREF9243_0059 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HMPREF9243_0059 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HMPREF9243_0059 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HMPREF9243_0061 PF02457 DisA bacterial checkpoint controller nucleotide-binding HMPREF9243_0066 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HMPREF9243_0066 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HMPREF9243_0070 PF13276 HTH-like domain HMPREF9243_0070 PF13333 Integrase core domain HMPREF9243_0070 PF00665 Integrase core domain HMPREF9243_0074 PF02581 Thiamine monophosphate synthase HMPREF9243_0074 PF08543 Phosphomethylpyrimidine kinase HMPREF9243_0076 PF00171 Aldehyde dehydrogenase family HMPREF9243_0076 PF00465 Iron-containing alcohol dehydrogenase HMPREF9243_0078 PF05193 Peptidase M16 inactive domain HMPREF9243_0078 PF00675 Insulinase (Peptidase family M16) HMPREF9243_0078 PF08367 Peptidase M16C associated HMPREF9243_0080 PF13276 HTH-like domain HMPREF9243_0080 PF00665 Integrase core domain HMPREF9243_0080 PF13333 Integrase core domain HMPREF9243_0081 PF02388 FemAB family HMPREF9243_0082 PF00534 Glycosyl transferases group 1 HMPREF9243_0082 PF13439 Glycosyltransferase Family 4 HMPREF9243_0084 PF00072 Response regulator receiver domain HMPREF9243_0084 PF00486 Transcriptional regulatory protein, C terminal HMPREF9243_0085 PF00512 His Kinase A (phospho-acceptor) domain HMPREF9243_0085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9243_0086 PF07943 Penicillin-binding protein 5, C-terminal domain HMPREF9243_0086 PF00768 D-alanyl-D-alanine carboxypeptidase HMPREF9243_0088 PF04397 LytTr DNA-binding domain HMPREF9243_0088 PF00072 Response regulator receiver domain HMPREF9243_0091 PF01979 Amidohydrolase family HMPREF9243_0092 PF00375 Sodium:dicarboxylate symporter family HMPREF9243_0094 PF02403 Seryl-tRNA synthetase N-terminal domain HMPREF9243_0094 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HMPREF9243_0095 PF01625 Peptide methionine sulfoxide reductase HMPREF9243_0096 PF01063 Amino-transferase class IV HMPREF9243_0100 PF00155 Aminotransferase class I and II HMPREF9243_0101 PF13411 MerR HTH family regulatory protein HMPREF9243_0102 PF14537 Cytochrome c3 HMPREF9243_0102 PF00890 FAD binding domain HMPREF9243_0105 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HMPREF9243_0106 PF13419 Haloacid dehalogenase-like hydrolase HMPREF9243_0107 PF02779 Transketolase, pyrimidine binding domain HMPREF9243_0107 PF02780 Transketolase, C-terminal domain HMPREF9243_0107 PF00456 Transketolase, thiamine diphosphate binding domain HMPREF9243_0108 PF00923 Transaldolase/Fructose-6-phosphate aldolase HMPREF9243_0109 PF00440 Bacterial regulatory proteins, tetR family HMPREF9243_0110 PF00005 ABC transporter HMPREF9243_0113 PF00881 Nitroreductase family HMPREF9243_0114 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF9243_0115 PF00085 Thioredoxin HMPREF9243_0116 PF00459 Inositol monophosphatase family HMPREF9243_0117 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HMPREF9243_0117 PF03466 LysR substrate binding domain HMPREF9243_0118 PF00378 Enoyl-CoA hydratase/isomerase HMPREF9243_0119 PF03060 Nitronate monooxygenase HMPREF9243_0120 PF02515 CoA-transferase family III HMPREF9243_0121 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HMPREF9243_0121 PF03466 LysR substrate binding domain HMPREF9243_0122 PF00248 Aldo/keto reductase family HMPREF9243_0129 PF03180 NLPA lipoprotein HMPREF9243_0130 PF00005 ABC transporter HMPREF9243_0130 PF09383 NIL domain HMPREF9243_0131 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_0135 PF12161 HsdM N-terminal domain HMPREF9243_0135 PF02384 N-6 DNA Methylase HMPREF9243_0138 PF01695 IstB-like ATP binding protein HMPREF9243_0159 PF00145 C-5 cytosine-specific DNA methylase HMPREF9243_0162 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HMPREF9243_0162 PF01348 Type II intron maturase HMPREF9243_0167 PF01555 DNA methylase HMPREF9243_0168 PF00398 Ribosomal RNA adenine dimethylase HMPREF9243_0174 PF00009 Elongation factor Tu GTP binding domain HMPREF9243_0174 PF14492 Elongation Factor G, domain II HMPREF9243_0174 PF00679 Elongation factor G C-terminus HMPREF9243_0174 PF03764 Elongation factor G, domain IV HMPREF9243_0175 PF17676 LD-carboxypeptidase C-terminal domain HMPREF9243_0175 PF02016 LD-carboxypeptidase N-terminal domain HMPREF9243_0177 PF03432 Relaxase/Mobilisation nuclease domain HMPREF9243_0190 PF02384 N-6 DNA Methylase HMPREF9243_0190 PF12161 HsdM N-terminal domain HMPREF9243_0192 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HMPREF9243_0196 PF12008 Type I restriction and modification enzyme - subunit R C terminal HMPREF9243_0196 PF18766 SWI2/SNF2 ATPase HMPREF9243_0196 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HMPREF9243_0201 PF13635 Domain of unknown function (DUF4143) HMPREF9243_0201 PF13173 AAA domain HMPREF9243_0208 PF13276 HTH-like domain HMPREF9243_0208 PF00665 Integrase core domain HMPREF9243_0208 PF13333 Integrase core domain HMPREF9243_0218 PF04205 FMN-binding domain HMPREF9243_0218 PF03358 NADPH-dependent FMN reductase HMPREF9243_0218 PF00890 FAD binding domain HMPREF9243_0220 PF03358 NADPH-dependent FMN reductase HMPREF9243_0220 PF04205 FMN-binding domain HMPREF9243_0220 PF00890 FAD binding domain HMPREF9243_0221 PF03466 LysR substrate binding domain HMPREF9243_0221 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HMPREF9243_0222 PF08501 Shikimate dehydrogenase substrate binding domain HMPREF9243_0222 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HMPREF9243_0223 PF07690 Major Facilitator Superfamily HMPREF9243_0224 PF01487 Type I 3-dehydroquinase HMPREF9243_0225 PF03600 Citrate transporter HMPREF9243_0231 PF00367 phosphotransferase system, EIIB HMPREF9243_0231 PF02378 Phosphotransferase system, EIIC HMPREF9243_0233 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HMPREF9243_0233 PF17203 Single cache domain 3 HMPREF9243_0233 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9243_0233 PF00989 PAS fold HMPREF9243_0234 PF00072 Response regulator receiver domain HMPREF9243_0236 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HMPREF9243_0236 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HMPREF9243_0237 PF04198 Putative sugar-binding domain HMPREF9243_0238 PF01380 SIS domain HMPREF9243_0238 PF01418 Helix-turn-helix domain, rpiR family HMPREF9243_0239 PF01238 Phosphomannose isomerase type I HMPREF9243_0240 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HMPREF9243_0241 PF01380 SIS domain HMPREF9243_0242 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF9243_0242 PF02378 Phosphotransferase system, EIIC HMPREF9243_0242 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HMPREF9243_0245 PF13419 Haloacid dehalogenase-like hydrolase HMPREF9243_0246 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF9243_0246 PF02378 Phosphotransferase system, EIIC HMPREF9243_0246 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HMPREF9243_0247 PF01238 Phosphomannose isomerase type I HMPREF9243_0250 PF03611 PTS system sugar-specific permease component HMPREF9243_0258 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HMPREF9243_0259 PF01791 DeoC/LacD family aldolase HMPREF9243_0260 PF02779 Transketolase, pyrimidine binding domain HMPREF9243_0260 PF00456 Transketolase, thiamine diphosphate binding domain HMPREF9243_0260 PF02780 Transketolase, C-terminal domain HMPREF9243_0262 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF9243_0265 PF13333 Integrase core domain HMPREF9243_0265 PF00665 Integrase core domain HMPREF9243_0265 PF13276 HTH-like domain HMPREF9243_0268 PF01116 Fructose-bisphosphate aldolase class-II HMPREF9243_0269 PF05690 Thiazole biosynthesis protein ThiG HMPREF9243_0271 PF01261 Xylose isomerase-like TIM barrel HMPREF9243_0272 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HMPREF9243_0272 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HMPREF9243_0275 PF01081 KDPG and KHG aldolase HMPREF9243_0276 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HMPREF9243_0276 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HMPREF9243_0276 PF01842 ACT domain HMPREF9243_0278 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HMPREF9243_0278 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HMPREF9243_0280 PF03613 PTS system mannose/fructose/sorbose family IID component HMPREF9243_0281 PF03830 PTS system sorbose subfamily IIB component HMPREF9243_0283 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HMPREF9243_0283 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HMPREF9243_0285 PF13419 Haloacid dehalogenase-like hydrolase HMPREF9243_0288 PF00665 Integrase core domain HMPREF9243_0288 PF13333 Integrase core domain HMPREF9243_0288 PF13276 HTH-like domain HMPREF9243_0291 PF00232 Glycosyl hydrolase family 1 HMPREF9243_0294 PF05043 Mga helix-turn-helix domain HMPREF9243_0294 PF08279 HTH domain HMPREF9243_0294 PF00874 PRD domain HMPREF9243_0294 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HMPREF9243_0295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF9243_0298 PF02378 Phosphotransferase system, EIIC HMPREF9243_0300 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_0303 PF13419 Haloacid dehalogenase-like hydrolase HMPREF9243_0304 PF00923 Transaldolase/Fructose-6-phosphate aldolase HMPREF9243_0305 PF00106 short chain dehydrogenase HMPREF9243_0307 PF06923 Glucitol operon activator protein (GutM) HMPREF9243_0308 PF03608 PTS system enzyme II sorbitol-specific factor HMPREF9243_0309 PF03612 Sorbitol phosphotransferase enzyme II N-terminus HMPREF9243_0309 PF07663 Sorbitol phosphotransferase enzyme II C-terminus HMPREF9243_0310 PF03829 PTS system glucitol/sorbitol-specific IIA component HMPREF9243_0311 PF01965 DJ-1/PfpI family HMPREF9243_0313 PF02515 CoA-transferase family III HMPREF9243_0314 PF03060 Nitronate monooxygenase HMPREF9243_0316 PF06874 Firmicute fructose-1,6-bisphosphatase HMPREF9243_0317 PF01773 Na+ dependent nucleoside transporter N-terminus HMPREF9243_0317 PF07662 Na+ dependent nucleoside transporter C-terminus HMPREF9243_0318 PF01156 Inosine-uridine preferring nucleoside hydrolase HMPREF9243_0319 PF01361 Tautomerase enzyme HMPREF9243_0322 PF03551 Transcriptional regulator PadR-like family HMPREF9243_0324 PF04326 Putative DNA-binding domain HMPREF9243_0328 PF08774 VRR-NUC domain HMPREF9243_0328 PF04851 Type III restriction enzyme, res subunit HMPREF9243_0335 PF13333 Integrase core domain HMPREF9243_0335 PF00665 Integrase core domain HMPREF9243_0335 PF13276 HTH-like domain HMPREF9243_0337 PF00005 ABC transporter HMPREF9243_0337 PF17755 UvrA DNA-binding domain HMPREF9243_0337 PF17760 UvrA interaction domain HMPREF9243_0338 PF12320 Type 5 capsule protein repressor C-terminal domain HMPREF9243_0338 PF00149 Calcineurin-like phosphoesterase HMPREF9243_0339 PF13476 AAA domain HMPREF9243_0342 PF07475 HPr Serine kinase C-terminal domain HMPREF9243_0342 PF02603 HPr Serine kinase N terminus HMPREF9243_0343 PF01790 Prolipoprotein diacylglyceryl transferase HMPREF9243_0344 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HMPREF9243_0344 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HMPREF9243_0345 PF00483 Nucleotidyl transferase HMPREF9243_0346 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF9243_0351 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HMPREF9243_0351 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HMPREF9243_0351 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HMPREF9243_0351 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HMPREF9243_0352 PF03668 P-loop ATPase protein family HMPREF9243_0353 PF01933 Uncharacterised protein family UPF0052 HMPREF9243_0354 PF10298 WhiA N-terminal LAGLIDADG-like domain HMPREF9243_0354 PF14527 WhiA LAGLIDADG-like domain HMPREF9243_0354 PF02650 WhiA C-terminal HTH domain HMPREF9243_0355 PF04205 FMN-binding domain HMPREF9243_0355 PF00890 FAD binding domain HMPREF9243_0356 PF00958 GMP synthase C terminal domain HMPREF9243_0356 PF13302 Acetyltransferase (GNAT) domain HMPREF9243_0356 PF13673 Acetyltransferase (GNAT) domain HMPREF9243_0356 PF00117 Glutamine amidotransferase class-I HMPREF9243_0356 PF03352 Methyladenine glycosylase HMPREF9243_0357 PF00436 Single-strand binding protein family HMPREF9243_0358 PF00486 Transcriptional regulatory protein, C terminal HMPREF9243_0358 PF00072 Response regulator receiver domain HMPREF9243_0359 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9243_0359 PF00512 His Kinase A (phospho-acceptor) domain HMPREF9243_0359 PF00672 HAMP domain HMPREF9243_0362 PF10672 S-adenosylmethionine-dependent methyltransferase HMPREF9243_0362 PF17785 PUA-like domain HMPREF9243_0363 PF13333 Integrase core domain HMPREF9243_0363 PF00665 Integrase core domain HMPREF9243_0363 PF13276 HTH-like domain HMPREF9243_0370 PF03883 Peroxide stress protein YaaA HMPREF9243_0371 PF02378 Phosphotransferase system, EIIC HMPREF9243_0371 PF00367 phosphotransferase system, EIIB HMPREF9243_0371 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HMPREF9243_0372 PF00749 tRNA synthetases class I (E and Q), catalytic domain HMPREF9243_0373 PF04343 Protein of unknown function, DUF488 HMPREF9243_0375 PF02424 ApbE family HMPREF9243_0376 PF00128 Alpha amylase, catalytic domain HMPREF9243_0380 PF00849 RNA pseudouridylate synthase HMPREF9243_0380 PF01479 S4 domain HMPREF9243_0381 PF00860 Permease family HMPREF9243_0383 PF02397 Bacterial sugar transferase HMPREF9243_0384 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain HMPREF9243_0384 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HMPREF9243_0384 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HMPREF9243_0385 PF02540 NAD synthase HMPREF9243_0386 PF09190 DALR domain HMPREF9243_0386 PF01406 tRNA synthetases class I (C) catalytic domain HMPREF9243_0387 PF00636 Ribonuclease III domain HMPREF9243_0388 PF00588 SpoU rRNA Methylase family HMPREF9243_0388 PF08032 RNA 2'-O ribose methyltransferase substrate binding HMPREF9243_0389 PF05991 YacP-like NYN domain HMPREF9243_0391 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HMPREF9243_0392 PF02357 Transcription termination factor nusG HMPREF9243_0392 PF00467 KOW motif HMPREF9243_0394 PF03946 Ribosomal protein L11, N-terminal domain HMPREF9243_0394 PF00298 Ribosomal protein L11, RNA binding domain HMPREF9243_0395 PF00687 Ribosomal protein L1p/L10e family HMPREF9243_0397 PF00466 Ribosomal protein L10 HMPREF9243_0398 PF16320 Ribosomal protein L7/L12 dimerisation domain HMPREF9243_0398 PF00542 Ribosomal protein L7/L12 C-terminal domain HMPREF9243_0399 PF00356 Bacterial regulatory proteins, lacI family HMPREF9243_0400 PF00294 pfkB family carbohydrate kinase HMPREF9243_0401 PF03812 2-keto-3-deoxygluconate permease HMPREF9243_0402 PF05175 Methyltransferase small domain HMPREF9243_0404 PF13333 Integrase core domain HMPREF9243_0404 PF13276 HTH-like domain HMPREF9243_0404 PF00665 Integrase core domain HMPREF9243_0405 PF00005 ABC transporter HMPREF9243_0405 PF00571 CBS domain HMPREF9243_0410 PF05167 Uncharacterised ACR (DUF711) HMPREF9243_0411 PF03009 Glycerophosphoryl diester phosphodiesterase family HMPREF9243_0412 PF01625 Peptide methionine sulfoxide reductase HMPREF9243_0413 PF04563 RNA polymerase beta subunit HMPREF9243_0413 PF04561 RNA polymerase Rpb2, domain 2 HMPREF9243_0413 PF10385 RNA polymerase beta subunit external 1 domain HMPREF9243_0413 PF00562 RNA polymerase Rpb2, domain 6 HMPREF9243_0413 PF04560 RNA polymerase Rpb2, domain 7 HMPREF9243_0413 PF04565 RNA polymerase Rpb2, domain 3 HMPREF9243_0414 PF05000 RNA polymerase Rpb1, domain 4 HMPREF9243_0414 PF04983 RNA polymerase Rpb1, domain 3 HMPREF9243_0414 PF04998 RNA polymerase Rpb1, domain 5 HMPREF9243_0414 PF00623 RNA polymerase Rpb1, domain 2 HMPREF9243_0414 PF04997 RNA polymerase Rpb1, domain 1 HMPREF9243_0415 PF03477 ATP cone domain HMPREF9243_0415 PF00317 Ribonucleotide reductase, all-alpha domain HMPREF9243_0415 PF02867 Ribonucleotide reductase, barrel domain HMPREF9243_0416 PF01923 Cobalamin adenosyltransferase HMPREF9243_0426 PF00005 ABC transporter HMPREF9243_0428 PF01545 Cation efflux family HMPREF9243_0429 PF17727 CtsR C-terminal dimerization domain HMPREF9243_0429 PF05848 CtsR N-terminal HTH domain HMPREF9243_0430 PF07724 AAA domain (Cdc48 subfamily) HMPREF9243_0430 PF17871 AAA lid domain HMPREF9243_0430 PF10431 C-terminal, D2-small domain, of ClpB protein HMPREF9243_0430 PF02861 Clp amino terminal domain, pathogenicity island component HMPREF9243_0430 PF00004 ATPase family associated with various cellular activities (AAA) HMPREF9243_0432 PF02558 Ketopantoate reductase PanE/ApbA HMPREF9243_0432 PF08546 Ketopantoate reductase PanE/ApbA C terminal HMPREF9243_0433 PF14437 MafB19-like deaminase HMPREF9243_0435 PF12169 DNA polymerase III subunits gamma and tau domain III HMPREF9243_0436 PF02575 YbaB/EbfC DNA-binding family HMPREF9243_0437 PF02132 RecR protein HMPREF9243_0437 PF13662 Toprim domain HMPREF9243_0438 PF02223 Thymidylate kinase HMPREF9243_0439 PF09115 DNA polymerase III, delta subunit, C terminal HMPREF9243_0441 PF06156 Initiation control protein YabA HMPREF9243_0442 PF05175 Methyltransferase small domain HMPREF9243_0444 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HMPREF9243_0446 PF01741 Large-conductance mechanosensitive channel, MscL HMPREF9243_0447 PF01266 FAD dependent oxidoreductase HMPREF9243_0449 PF00155 Aminotransferase class I and II HMPREF9243_0450 PF01966 HD domain HMPREF9243_0454 PF05066 HB1, ASXL, restriction endonuclease HTH domain HMPREF9243_0455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HMPREF9243_0456 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HMPREF9243_0456 PF07497 Rho termination factor, RNA-binding domain HMPREF9243_0456 PF07498 Rho termination factor, N-terminal domain HMPREF9243_0457 PF01197 Ribosomal protein L31 HMPREF9243_0458 PF04203 Sortase domain HMPREF9243_0461 PF07478 D-ala D-ala ligase C-terminus HMPREF9243_0461 PF01820 D-ala D-ala ligase N-terminus HMPREF9243_0462 PF08245 Mur ligase middle domain HMPREF9243_0462 PF02875 Mur ligase family, glutamate ligase domain HMPREF9243_0462 PF01225 Mur ligase family, catalytic domain HMPREF9243_0463 PF00271 Helicase conserved C-terminal domain HMPREF9243_0463 PF00270 DEAD/DEAH box helicase HMPREF9243_0464 PF01648 4'-phosphopantetheinyl transferase superfamily HMPREF9243_0465 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HMPREF9243_0469 PF07739 TipAS antibiotic-recognition domain HMPREF9243_0469 PF13411 MerR HTH family regulatory protein HMPREF9243_0471 PF00005 ABC transporter HMPREF9243_0471 PF13732 Domain of unknown function (DUF4162) HMPREF9243_0473 PF00571 CBS domain HMPREF9243_0473 PF01595 Cyclin M transmembrane N-terminal domain HMPREF9243_0473 PF03471 Transporter associated domain HMPREF9243_0477 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) HMPREF9243_0478 PF00535 Glycosyl transferase family 2 HMPREF9243_0484 PF01541 GIY-YIG catalytic domain HMPREF9243_0484 PF02151 UvrB/uvrC motif HMPREF9243_0484 PF08459 UvrC Helix-hairpin-helix N-terminal HMPREF9243_0486 PF00270 DEAD/DEAH box helicase HMPREF9243_0486 PF00271 Helicase conserved C-terminal domain HMPREF9243_0487 PF00132 Bacterial transferase hexapeptide (six repeats) HMPREF9243_0487 PF12804 MobA-like NTP transferase domain HMPREF9243_0488 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HMPREF9243_0488 PF14572 Phosphoribosyl synthetase-associated domain HMPREF9243_0489 PF01195 Peptidyl-tRNA hydrolase HMPREF9243_0490 PF02559 CarD-like/TRCF domain HMPREF9243_0490 PF00271 Helicase conserved C-terminal domain HMPREF9243_0490 PF00270 DEAD/DEAH box helicase HMPREF9243_0490 PF03461 TRCF domain HMPREF9243_0490 PF17757 UvrB interaction domain HMPREF9243_0491 PF01943 Polysaccharide biosynthesis protein HMPREF9243_0491 PF14667 Polysaccharide biosynthesis C-terminal domain HMPREF9243_0492 PF01479 S4 domain HMPREF9243_0494 PF00575 S1 RNA binding domain HMPREF9243_0495 PF01171 PP-loop family HMPREF9243_0495 PF11734 TilS substrate C-terminal domain HMPREF9243_0497 PF06480 FtsH Extracellular HMPREF9243_0497 PF00004 ATPase family associated with various cellular activities (AAA) HMPREF9243_0497 PF17862 AAA+ lid domain HMPREF9243_0497 PF01434 Peptidase family M41 HMPREF9243_0498 PF01430 Hsp33 protein HMPREF9243_0499 PF00291 Pyridoxal-phosphate dependent enzyme HMPREF9243_0500 PF01207 Dihydrouridine synthase (Dus) HMPREF9243_0501 PF01336 OB-fold nucleic acid binding domain HMPREF9243_0501 PF00152 tRNA synthetases class II (D, K and N) HMPREF9243_0503 PF00164 Ribosomal protein S12/S23 HMPREF9243_0504 PF00177 Ribosomal protein S7p/S5e HMPREF9243_0505 PF14492 Elongation Factor G, domain II HMPREF9243_0505 PF03764 Elongation factor G, domain IV HMPREF9243_0505 PF00009 Elongation factor Tu GTP binding domain HMPREF9243_0505 PF03144 Elongation factor Tu domain 2 HMPREF9243_0505 PF00679 Elongation factor G C-terminus HMPREF9243_0506 PF03144 Elongation factor Tu domain 2 HMPREF9243_0506 PF03143 Elongation factor Tu C-terminal domain HMPREF9243_0506 PF00009 Elongation factor Tu GTP binding domain HMPREF9243_0508 PF00338 Ribosomal protein S10p/S20e HMPREF9243_0509 PF00297 Ribosomal protein L3 HMPREF9243_0510 PF00573 Ribosomal protein L4/L1 family HMPREF9243_0511 PF00276 Ribosomal protein L23 HMPREF9243_0512 PF03947 Ribosomal Proteins L2, C-terminal domain HMPREF9243_0512 PF00181 Ribosomal Proteins L2, RNA binding domain HMPREF9243_0513 PF00203 Ribosomal protein S19 HMPREF9243_0514 PF00237 Ribosomal protein L22p/L17e HMPREF9243_0515 PF00189 Ribosomal protein S3, C-terminal domain HMPREF9243_0515 PF07650 KH domain HMPREF9243_0516 PF00252 Ribosomal protein L16p/L10e HMPREF9243_0517 PF00831 Ribosomal L29 protein HMPREF9243_0518 PF00366 Ribosomal protein S17 HMPREF9243_0519 PF00238 Ribosomal protein L14p/L23e HMPREF9243_0520 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HMPREF9243_0520 PF00467 KOW motif HMPREF9243_0521 PF00281 Ribosomal protein L5 HMPREF9243_0521 PF00673 ribosomal L5P family C-terminus HMPREF9243_0522 PF00410 Ribosomal protein S8 HMPREF9243_0523 PF00347 Ribosomal protein L6 HMPREF9243_0524 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HMPREF9243_0525 PF00333 Ribosomal protein S5, N-terminal domain HMPREF9243_0525 PF03719 Ribosomal protein S5, C-terminal domain HMPREF9243_0526 PF00327 Ribosomal protein L30p/L7e HMPREF9243_0527 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HMPREF9243_0528 PF00344 SecY translocase HMPREF9243_0529 PF05191 Adenylate kinase, active site lid HMPREF9243_0530 PF01176 Translation initiation factor 1A / IF-1 HMPREF9243_0531 PF00416 Ribosomal protein S13/S18 HMPREF9243_0532 PF00411 Ribosomal protein S11 HMPREF9243_0533 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HMPREF9243_0533 PF01000 RNA polymerase Rpb3/RpoA insert domain HMPREF9243_0533 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HMPREF9243_0534 PF01196 Ribosomal protein L17 HMPREF9243_0535 PF01757 Acyltransferase family HMPREF9243_0537 PF00005 ABC transporter HMPREF9243_0538 PF00005 ABC transporter HMPREF9243_0539 PF02361 Cobalt transport protein HMPREF9243_0540 PF01416 tRNA pseudouridine synthase HMPREF9243_0545 PF00572 Ribosomal protein L13 HMPREF9243_0546 PF00380 Ribosomal protein S9/S16 HMPREF9243_0547 PF17041 E domain HMPREF9243_0547 PF04650 YSIRK type signal peptide HMPREF9243_0547 PF07501 G5 domain HMPREF9243_0547 PF00746 LPXTG cell wall anchor motif HMPREF9243_0554 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HMPREF9243_0555 PF00781 Diacylglycerol kinase catalytic domain HMPREF9243_0556 PF00633 Helix-hairpin-helix motif HMPREF9243_0556 PF10576 Iron-sulfur binding domain of endonuclease III HMPREF9243_0556 PF00730 HhH-GPD superfamily base excision DNA repair protein HMPREF9243_0557 PF00890 FAD binding domain HMPREF9243_0557 PF04205 FMN-binding domain HMPREF9243_0557 PF03358 NADPH-dependent FMN reductase HMPREF9243_0558 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_0559 PF00005 ABC transporter HMPREF9243_0559 PF00571 CBS domain HMPREF9243_0560 PF02423 Ornithine cyclodeaminase/mu-crystallin family HMPREF9243_0562 PF00881 Nitroreductase family HMPREF9243_0563 PF00849 RNA pseudouridylate synthase HMPREF9243_0563 PF01479 S4 domain HMPREF9243_0564 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HMPREF9243_0564 PF00056 lactate/malate dehydrogenase, NAD binding domain HMPREF9243_0568 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_0569 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_0571 PF08240 Alcohol dehydrogenase GroES-like domain HMPREF9243_0571 PF00107 Zinc-binding dehydrogenase HMPREF9243_0572 PF07969 Amidohydrolase family HMPREF9243_0573 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HMPREF9243_0574 PF00296 Luciferase-like monooxygenase HMPREF9243_0575 PF05552 Conserved TM helix HMPREF9243_0576 PF01597 Glycine cleavage H-protein HMPREF9243_0577 PF01661 Macro domain HMPREF9243_0579 PF03099 Biotin/lipoate A/B protein ligase family HMPREF9243_0579 PF10437 Bacterial lipoate protein ligase C-terminus HMPREF9243_0580 PF03641 Possible lysine decarboxylase HMPREF9243_0581 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HMPREF9243_0581 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HMPREF9243_0582 PF01476 LysM domain HMPREF9243_0582 PF00005 ABC transporter HMPREF9243_0583 PF16363 GDP-mannose 4,6 dehydratase HMPREF9243_0584 PF00860 Permease family HMPREF9243_0588 PF02631 RecX family HMPREF9243_0589 PF00730 HhH-GPD superfamily base excision DNA repair protein HMPREF9243_0589 PF14815 NUDIX domain HMPREF9243_0590 PF04167 Protein of unknown function (DUF402) HMPREF9243_0592 PF17999 Pullulanase N1-terminal domain HMPREF9243_0592 PF00128 Alpha amylase, catalytic domain HMPREF9243_0592 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HMPREF9243_0593 PF06081 Aromatic acid exporter family member 1 HMPREF9243_0595 PF03807 NADP oxidoreductase coenzyme F420-dependent HMPREF9243_0595 PF14748 Pyrroline-5-carboxylate reductase dimerisation HMPREF9243_0611 PF14659 Phage integrase, N-terminal SAM-like domain HMPREF9243_0611 PF00589 Phage integrase family HMPREF9243_0613 PF01381 Helix-turn-helix HMPREF9243_0615 PF02417 Chromate transporter HMPREF9243_0617 PF03358 NADPH-dependent FMN reductase HMPREF9243_0617 PF00890 FAD binding domain HMPREF9243_0617 PF04205 FMN-binding domain HMPREF9243_0619 PF13276 HTH-like domain HMPREF9243_0619 PF00665 Integrase core domain HMPREF9243_0619 PF13333 Integrase core domain HMPREF9243_0624 PF01547 Bacterial extracellular solute-binding protein HMPREF9243_0626 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_0627 PF17912 MalK OB fold domain HMPREF9243_0627 PF00005 ABC transporter HMPREF9243_0628 PF01547 Bacterial extracellular solute-binding protein HMPREF9243_0631 PF01156 Inosine-uridine preferring nucleoside hydrolase HMPREF9243_0636 PF00356 Bacterial regulatory proteins, lacI family HMPREF9243_0637 PF08244 Glycosyl hydrolases family 32 C terminal HMPREF9243_0637 PF00251 Glycosyl hydrolases family 32 N-terminal domain HMPREF9243_0638 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HMPREF9243_0638 PF00367 phosphotransferase system, EIIB HMPREF9243_0638 PF02378 Phosphotransferase system, EIIC HMPREF9243_0639 PF00478 IMP dehydrogenase / GMP reductase domain HMPREF9243_0639 PF00571 CBS domain HMPREF9243_0640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HMPREF9243_0640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HMPREF9243_0641 PF00156 Phosphoribosyl transferase domain HMPREF9243_0642 PF00588 SpoU rRNA Methylase family HMPREF9243_0643 PF00905 Penicillin binding protein transpeptidase domain HMPREF9243_0643 PF00912 Transglycosylase HMPREF9243_0644 PF06133 Control of competence regulator ComK, YlbF/YmcA HMPREF9243_0646 PF13514 AAA domain HMPREF9243_0647 PF01966 HD domain HMPREF9243_0648 PF08437 Glycosyl transferase family 8 C-terminal HMPREF9243_0648 PF01501 Glycosyl transferase family 8 HMPREF9243_0651 PF01230 HIT domain HMPREF9243_0652 PF00005 ABC transporter HMPREF9243_0655 PF02390 Putative methyltransferase HMPREF9243_0657 PF14794 Domain of unknown function (DUF4479) HMPREF9243_0657 PF01588 Putative tRNA binding domain HMPREF9243_0659 PF01225 Mur ligase family, catalytic domain HMPREF9243_0659 PF02875 Mur ligase family, glutamate ligase domain HMPREF9243_0659 PF08245 Mur ligase middle domain HMPREF9243_0660 PF00483 Nucleotidyl transferase HMPREF9243_0662 PF02875 Mur ligase family, glutamate ligase domain HMPREF9243_0662 PF08245 Mur ligase middle domain HMPREF9243_0665 PF13603 Leucyl-tRNA synthetase, Domain 2 HMPREF9243_0665 PF09334 tRNA synthetases class I (M) HMPREF9243_0665 PF00133 tRNA synthetases class I (I, L, M and V) HMPREF9243_0665 PF08264 Anticodon-binding domain of tRNA HMPREF9243_0667 PF00005 ABC transporter HMPREF9243_0668 PF00497 Bacterial extracellular solute-binding proteins, family 3 HMPREF9243_0669 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_0670 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_0672 PF14667 Polysaccharide biosynthesis C-terminal domain HMPREF9243_0672 PF01943 Polysaccharide biosynthesis protein HMPREF9243_0675 PF01546 Peptidase family M20/M25/M40 HMPREF9243_0676 PF08032 RNA 2'-O ribose methyltransferase substrate binding HMPREF9243_0676 PF00588 SpoU rRNA Methylase family HMPREF9243_0678 PF01638 HxlR-like helix-turn-helix HMPREF9243_0680 PF01409 tRNA synthetases class II core domain (F) HMPREF9243_0680 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HMPREF9243_0681 PF03147 Ferredoxin-fold anticodon binding domain HMPREF9243_0681 PF03484 tRNA synthetase B5 domain HMPREF9243_0681 PF03483 B3/4 domain HMPREF9243_0681 PF01588 Putative tRNA binding domain HMPREF9243_0681 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HMPREF9243_0682 PF01235 Sodium:alanine symporter family HMPREF9243_0683 PF01515 Phosphate acetyl/butaryl transferase HMPREF9243_0688 PF17941 Polyphosphate kinase C-terminal domain 1 HMPREF9243_0688 PF02503 Polyphosphate kinase middle domain HMPREF9243_0688 PF13089 Polyphosphate kinase N-terminal domain HMPREF9243_0688 PF13090 Polyphosphate kinase C-terminal domain 2 HMPREF9243_0689 PF04260 Protein of unknown function (DUF436) HMPREF9243_0690 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HMPREF9243_0693 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HMPREF9243_0693 PF01565 FAD binding domain HMPREF9243_0694 PF12558 ATP-binding cassette cobalt transporter HMPREF9243_0694 PF00005 ABC transporter HMPREF9243_0695 PF00300 Histidine phosphatase superfamily (branch 1) HMPREF9243_0699 PF00005 ABC transporter HMPREF9243_0700 PF00912 Transglycosylase HMPREF9243_0700 PF00905 Penicillin binding protein transpeptidase domain HMPREF9243_0701 PF01709 Transcriptional regulator HMPREF9243_0702 PF03051 Peptidase C1-like family HMPREF9243_0703 PF02687 FtsX-like permease family HMPREF9243_0704 PF00005 ABC transporter HMPREF9243_0708 PF00356 Bacterial regulatory proteins, lacI family HMPREF9243_0709 PF03830 PTS system sorbose subfamily IIB component HMPREF9243_0710 PF03609 PTS system sorbose-specific iic component HMPREF9243_0715 PF00005 ABC transporter HMPREF9243_0715 PF00664 ABC transporter transmembrane region HMPREF9243_0716 PF00005 ABC transporter HMPREF9243_0716 PF00664 ABC transporter transmembrane region HMPREF9243_0718 PF01791 DeoC/LacD family aldolase HMPREF9243_0721 PF03413 Peptidase propeptide and YPEB domain HMPREF9243_0725 PF03358 NADPH-dependent FMN reductase HMPREF9243_0725 PF00890 FAD binding domain HMPREF9243_0725 PF04205 FMN-binding domain HMPREF9243_0726 PF13350 Tyrosine phosphatase family HMPREF9243_0728 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HMPREF9243_0729 PF00367 phosphotransferase system, EIIB HMPREF9243_0729 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HMPREF9243_0729 PF02378 Phosphotransferase system, EIIC HMPREF9243_0730 PF01979 Amidohydrolase family HMPREF9243_0731 PF00268 Ribonucleotide reductase, small chain HMPREF9243_0732 PF07972 NrdI Flavodoxin like HMPREF9243_0733 PF08343 Ribonucleotide reductase N-terminal HMPREF9243_0733 PF00317 Ribonucleotide reductase, all-alpha domain HMPREF9243_0733 PF02867 Ribonucleotide reductase, barrel domain HMPREF9243_0734 PF00300 Histidine phosphatase superfamily (branch 1) HMPREF9243_0735 PF00300 Histidine phosphatase superfamily (branch 1) HMPREF9243_0736 PF03358 NADPH-dependent FMN reductase HMPREF9243_0738 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HMPREF9243_0738 PF00205 Thiamine pyrophosphate enzyme, central domain HMPREF9243_0738 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HMPREF9243_0741 PF02655 ATP-grasp domain HMPREF9243_0741 PF18419 ATP-grasp-like domain HMPREF9243_0741 PF04262 Glutamate-cysteine ligase HMPREF9243_0743 PF13333 Integrase core domain HMPREF9243_0743 PF00665 Integrase core domain HMPREF9243_0743 PF13276 HTH-like domain HMPREF9243_0744 PF00005 ABC transporter HMPREF9243_0744 PF17912 MalK OB fold domain HMPREF9243_0744 PF03459 TOBE domain HMPREF9243_0745 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_0746 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_0747 PF13416 Bacterial extracellular solute-binding protein HMPREF9243_0752 PF00392 Bacterial regulatory proteins, gntR family HMPREF9243_0752 PF00155 Aminotransferase class I and II HMPREF9243_0753 PF01680 SOR/SNZ family HMPREF9243_0754 PF01174 SNO glutamine amidotransferase family HMPREF9243_0758 PF03358 NADPH-dependent FMN reductase HMPREF9243_0759 PF11798 IMS family HHH motif HMPREF9243_0759 PF11799 impB/mucB/samB family C-terminal domain HMPREF9243_0759 PF00817 impB/mucB/samB family HMPREF9243_0762 PF03180 NLPA lipoprotein HMPREF9243_0764 PF04650 YSIRK type signal peptide HMPREF9243_0764 PF00746 LPXTG cell wall anchor motif HMPREF9243_0764 PF17480 AlphaC C-terminal HMPREF9243_0764 PF08829 Alpha C protein N terminal HMPREF9243_0766 PF16993 Accessory Sec system protein Asp1 HMPREF9243_0767 PF16929 Accessory Sec system GspB-transporter HMPREF9243_0769 PF07517 SecA DEAD-like domain HMPREF9243_0769 PF07516 SecA Wing and Scaffold domain HMPREF9243_0769 PF01043 SecA preprotein cross-linking domain HMPREF9243_0770 PF00534 Glycosyl transferases group 1 HMPREF9243_0773 PF01501 Glycosyl transferase family 8 HMPREF9243_0773 PF08759 Glycosyltransferase GT-D fold HMPREF9243_0774 PF00535 Glycosyl transferase family 2 HMPREF9243_0775 PF00892 EamA-like transporter family HMPREF9243_0778 PF00132 Bacterial transferase hexapeptide (six repeats) HMPREF9243_0779 PF00291 Pyridoxal-phosphate dependent enzyme HMPREF9243_0780 PF01070 FMN-dependent dehydrogenase HMPREF9243_0781 PF08544 GHMP kinases C terminal HMPREF9243_0781 PF00288 GHMP kinases N terminal domain HMPREF9243_0783 PF00288 GHMP kinases N terminal domain HMPREF9243_0783 PF08544 GHMP kinases C terminal HMPREF9243_0784 PF00958 GMP synthase C terminal domain HMPREF9243_0784 PF02540 NAD synthase HMPREF9243_0784 PF00117 Glutamine amidotransferase class-I HMPREF9243_0794 PF12146 Serine aminopeptidase, S33 HMPREF9243_0795 PF18389 TrmO C-terminal domain HMPREF9243_0795 PF01980 tRNA-methyltransferase O HMPREF9243_0798 PF00440 Bacterial regulatory proteins, tetR family HMPREF9243_0799 PF00005 ABC transporter HMPREF9243_0799 PF02687 FtsX-like permease family HMPREF9243_0799 PF12704 MacB-like periplasmic core domain HMPREF9243_0802 PF02378 Phosphotransferase system, EIIC HMPREF9243_0802 PF00367 phosphotransferase system, EIIB HMPREF9243_0806 PF01713 Smr domain HMPREF9243_0806 PF00488 MutS domain V HMPREF9243_0807 PF00085 Thioredoxin HMPREF9243_0809 PF02142 MGS-like domain HMPREF9243_0810 PF03616 Sodium/glutamate symporter HMPREF9243_0811 PF01177 Asp/Glu/Hydantoin racemase HMPREF9243_0813 PF12850 Calcineurin-like phosphoesterase superfamily domain HMPREF9243_0814 PF00924 Mechanosensitive ion channel HMPREF9243_0816 PF12732 YtxH-like protein HMPREF9243_0818 PF01813 ATP synthase subunit D HMPREF9243_0819 PF02874 ATP synthase alpha/beta family, beta-barrel domain HMPREF9243_0819 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HMPREF9243_0820 PF02874 ATP synthase alpha/beta family, beta-barrel domain HMPREF9243_0820 PF16886 ATPsynthase alpha/beta subunit N-term extension HMPREF9243_0820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HMPREF9243_0824 PF01496 V-type ATPase 116kDa subunit family HMPREF9243_0828 PF00437 Type II/IV secretion system protein HMPREF9243_0829 PF00482 Type II secretion system (T2SS), protein F HMPREF9243_0830 PF07963 Prokaryotic N-terminal methylation motif HMPREF9243_0834 PF00557 Metallopeptidase family M24 HMPREF9243_0834 PF01321 Creatinase/Prolidase N-terminal domain HMPREF9243_0835 PF08207 Elongation factor P (EF-P) KOW-like domain HMPREF9243_0835 PF09285 Elongation factor P, C-terminal HMPREF9243_0835 PF01132 Elongation factor P (EF-P) OB domain HMPREF9243_0837 PF01029 NusB family HMPREF9243_0838 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HMPREF9243_0838 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HMPREF9243_0839 PF13742 OB-fold nucleic acid binding domain HMPREF9243_0839 PF02601 Exonuclease VII, large subunit HMPREF9243_0840 PF02609 Exonuclease VII small subunit HMPREF9243_0841 PF00348 Polyprenyl synthetase HMPREF9243_0842 PF01479 S4 domain HMPREF9243_0842 PF01728 FtsJ-like methyltransferase HMPREF9243_0843 PF13476 AAA domain HMPREF9243_0845 PF16360 GTP-binding GTPase Middle Region HMPREF9243_0845 PF13167 GTP-binding GTPase N-terminal HMPREF9243_0845 PF01926 50S ribosome-binding GTPase HMPREF9243_0847 PF00072 Response regulator receiver domain HMPREF9243_0847 PF00486 Transcriptional regulatory protein, C terminal HMPREF9243_0851 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9243_0851 PF00512 His Kinase A (phospho-acceptor) domain HMPREF9243_0851 PF00672 HAMP domain HMPREF9243_0852 PF04205 FMN-binding domain HMPREF9243_0852 PF00890 FAD binding domain HMPREF9243_0854 PF13276 HTH-like domain HMPREF9243_0854 PF00665 Integrase core domain HMPREF9243_0854 PF13333 Integrase core domain HMPREF9243_0856 PF03816 Cell envelope-related transcriptional attenuator domain HMPREF9243_0857 PF02706 Chain length determinant protein HMPREF9243_0857 PF13807 G-rich domain on putative tyrosine kinase HMPREF9243_0858 PF13614 AAA domain HMPREF9243_0860 PF02719 Polysaccharide biosynthesis protein HMPREF9243_0861 PF02397 Bacterial sugar transferase HMPREF9243_0862 PF01370 NAD dependent epimerase/dehydratase family HMPREF9243_0863 PF13439 Glycosyltransferase Family 4 HMPREF9243_0863 PF00534 Glycosyl transferases group 1 HMPREF9243_0871 PF01501 Glycosyl transferase family 8 HMPREF9243_0871 PF00535 Glycosyl transferase family 2 HMPREF9243_0873 PF14667 Polysaccharide biosynthesis C-terminal domain HMPREF9243_0873 PF01943 Polysaccharide biosynthesis protein HMPREF9243_0874 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HMPREF9243_0874 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HMPREF9243_0874 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HMPREF9243_0886 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HMPREF9243_0889 PF01336 OB-fold nucleic acid binding domain HMPREF9243_0889 PF02811 PHP domain HMPREF9243_0889 PF00929 Exonuclease HMPREF9243_0889 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HMPREF9243_0889 PF07733 Bacterial DNA polymerase III alpha NTPase domain HMPREF9243_0889 PF11490 DNA polymerase III polC-type N-terminus II HMPREF9243_0889 PF14579 Helix-hairpin-helix motif HMPREF9243_0890 PF03976 Polyphosphate kinase 2 (PPK2) HMPREF9243_0891 PF01381 Helix-turn-helix HMPREF9243_0893 PF01433 Peptidase family M1 domain HMPREF9243_0893 PF11838 ERAP1-like C-terminal domain HMPREF9243_0900 PF00294 pfkB family carbohydrate kinase HMPREF9243_0903 PF03631 Virulence factor BrkB HMPREF9243_0904 PF01098 Cell cycle protein HMPREF9243_0905 PF03960 ArsC family HMPREF9243_0906 PF01597 Glycine cleavage H-protein HMPREF9243_0908 PF07722 Peptidase C26 HMPREF9243_0909 PF05649 Peptidase family M13 HMPREF9243_0909 PF01431 Peptidase family M13 HMPREF9243_0910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF9243_0911 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF9243_0912 PF01546 Peptidase family M20/M25/M40 HMPREF9243_0912 PF07687 Peptidase dimerisation domain HMPREF9243_0913 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase HMPREF9243_0913 PF09363 XFP C-terminal domain HMPREF9243_0913 PF09364 XFP N-terminal domain HMPREF9243_0914 PF03485 Arginyl tRNA synthetase N terminal domain HMPREF9243_0914 PF05746 DALR anticodon binding domain HMPREF9243_0914 PF00750 tRNA synthetases class I (R) HMPREF9243_0921 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HMPREF9243_0921 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF9243_0924 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HMPREF9243_0924 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HMPREF9243_0925 PF01381 Helix-turn-helix HMPREF9243_0932 PF00731 AIR carboxylase HMPREF9243_0933 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HMPREF9243_0933 PF02222 ATP-grasp domain HMPREF9243_0934 PF01259 SAICAR synthetase HMPREF9243_0935 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase HMPREF9243_0937 PF00586 AIR synthase related protein, N-terminal domain HMPREF9243_0937 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HMPREF9243_0937 PF02769 AIR synthase related protein, C-terminal domain HMPREF9243_0938 PF13537 Glutamine amidotransferase domain HMPREF9243_0938 PF00156 Phosphoribosyl transferase domain HMPREF9243_0939 PF02769 AIR synthase related protein, C-terminal domain HMPREF9243_0939 PF00586 AIR synthase related protein, N-terminal domain HMPREF9243_0940 PF00551 Formyl transferase HMPREF9243_0941 PF01808 AICARFT/IMPCHase bienzyme HMPREF9243_0941 PF02142 MGS-like domain HMPREF9243_0942 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HMPREF9243_0942 PF02843 Phosphoribosylglycinamide synthetase, C domain HMPREF9243_0942 PF02844 Phosphoribosylglycinamide synthetase, N domain HMPREF9243_0943 PF10397 Adenylosuccinate lyase C-terminus HMPREF9243_0943 PF00206 Lyase HMPREF9243_0946 PF04228 Putative neutral zinc metallopeptidase HMPREF9243_0947 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF9243_0947 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HMPREF9243_0948 PF00690 Cation transporter/ATPase, N-terminus HMPREF9243_0948 PF00689 Cation transporting ATPase, C-terminus HMPREF9243_0950 PF17674 HHH domain HMPREF9243_0950 PF00575 S1 RNA binding domain HMPREF9243_0950 PF09371 Tex-like protein N-terminal domain HMPREF9243_0950 PF16921 Tex protein YqgF-like domain HMPREF9243_0951 PF10263 SprT-like family HMPREF9243_0951 PF17283 SprT-like zinc ribbon domain HMPREF9243_0952 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HMPREF9243_0952 PF00056 lactate/malate dehydrogenase, NAD binding domain HMPREF9243_0953 PF00871 Acetokinase family HMPREF9243_0954 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HMPREF9243_0954 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HMPREF9243_0955 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HMPREF9243_0955 PF01266 FAD dependent oxidoreductase HMPREF9243_0956 PF00230 Major intrinsic protein HMPREF9243_0958 PF00582 Universal stress protein family HMPREF9243_0960 PF16193 AAA C-terminal domain HMPREF9243_0960 PF05496 Holliday junction DNA helicase RuvB P-loop domain HMPREF9243_0960 PF12002 MgsA AAA+ ATPase C terminal HMPREF9243_0961 PF00266 Aminotransferase class-V HMPREF9243_0964 PF14490 Helix-hairpin-helix containing domain HMPREF9243_0964 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HMPREF9243_0964 PF13538 UvrD-like helicase C-terminal domain HMPREF9243_0967 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HMPREF9243_0967 PF01411 tRNA synthetases class II (A) HMPREF9243_0967 PF02272 DHHA1 domain HMPREF9243_0968 PF06135 IreB regulatory phosphoprotein HMPREF9243_0969 PF03652 Holliday junction resolvase HMPREF9243_0970 PF06949 Protein of unknown function (DUF1292) HMPREF9243_0971 PF02618 YceG-like family HMPREF9243_0972 PF01272 Transcription elongation factor, GreA/GreB, C-term HMPREF9243_0972 PF03449 Transcription elongation factor, N-terminal HMPREF9243_0977 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMPREF9243_0977 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HMPREF9243_0978 PF00550 Phosphopantetheine attachment site HMPREF9243_0979 PF03060 Nitronate monooxygenase HMPREF9243_0980 PF00698 Acyl transferase domain HMPREF9243_0982 PF02801 Beta-ketoacyl synthase, C-terminal domain HMPREF9243_0982 PF00109 Beta-ketoacyl synthase, N-terminal domain HMPREF9243_0983 PF00364 Biotin-requiring enzyme HMPREF9243_0984 PF07977 FabA-like domain HMPREF9243_0985 PF00289 Biotin carboxylase, N-terminal domain HMPREF9243_0985 PF02785 Biotin carboxylase C-terminal domain HMPREF9243_0985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HMPREF9243_0986 PF01039 Carboxyl transferase domain HMPREF9243_0986 PF17848 Acetyl-coA carboxylase zinc finger domain HMPREF9243_0987 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HMPREF9243_0989 PF13456 Reverse transcriptase-like HMPREF9243_0993 PF04205 FMN-binding domain HMPREF9243_0993 PF00890 FAD binding domain HMPREF9243_0995 PF09154 Domain of unknown function (DUF1939) HMPREF9243_0995 PF00128 Alpha amylase, catalytic domain HMPREF9243_0996 PF00459 Inositol monophosphatase family HMPREF9243_0997 PF02293 AmiS/UreI family transporter HMPREF9243_0998 PF13276 HTH-like domain HMPREF9243_0998 PF00665 Integrase core domain HMPREF9243_0998 PF13333 Integrase core domain HMPREF9243_1001 PF02926 THUMP domain HMPREF9243_1001 PF01170 Putative RNA methylase family UPF0020 HMPREF9243_1003 PF05103 DivIVA protein HMPREF9243_1006 PF02824 TGS domain HMPREF9243_1006 PF04607 Region found in RelA / SpoT proteins HMPREF9243_1006 PF13291 ACT domain HMPREF9243_1007 PF02580 D-Tyr-tRNA(Tyr) deacylase HMPREF9243_1010 PF08239 Bacterial SH3 domain HMPREF9243_1010 PF01520 N-acetylmuramoyl-L-alanine amidase HMPREF9243_1011 PF08279 HTH domain HMPREF9243_1011 PF05043 Mga helix-turn-helix domain HMPREF9243_1011 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HMPREF9243_1011 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF9243_1011 PF00874 PRD domain HMPREF9243_1013 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF9243_1014 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HMPREF9243_1015 PF02378 Phosphotransferase system, EIIC HMPREF9243_1015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF9243_1016 PF00834 Ribulose-phosphate 3 epimerase family HMPREF9243_1018 PF13393 Histidyl-tRNA synthetase HMPREF9243_1018 PF03129 Anticodon binding domain HMPREF9243_1019 PF00152 tRNA synthetases class II (D, K and N) HMPREF9243_1019 PF01336 OB-fold nucleic acid binding domain HMPREF9243_1019 PF02938 GAD domain HMPREF9243_1023 PF03618 Kinase/pyrophosphorylase HMPREF9243_1024 PF01475 Ferric uptake regulator family HMPREF9243_1025 PF03812 2-keto-3-deoxygluconate permease HMPREF9243_1026 PF02608 ABC transporter substrate-binding protein PnrA-like HMPREF9243_1032 PF01165 Ribosomal protein S21 HMPREF9243_1033 PF09424 Yqey-like protein HMPREF9243_1034 PF02562 PhoH-like protein HMPREF9243_1035 PF02130 Uncharacterized protein family UPF0054 HMPREF9243_1037 PF01926 50S ribosome-binding GTPase HMPREF9243_1037 PF07650 KH domain HMPREF9243_1038 PF02565 Recombination protein O C terminal HMPREF9243_1038 PF11967 Recombination protein O N terminal HMPREF9243_1040 PF02091 Glycyl-tRNA synthetase alpha subunit HMPREF9243_1041 PF02092 Glycyl-tRNA synthetase beta subunit HMPREF9243_1042 PF01926 50S ribosome-binding GTPase HMPREF9243_1042 PF09269 Domain of unknown function (DUF1967) HMPREF9243_1042 PF01018 GTP1/OBG HMPREF9243_1043 PF12706 Beta-lactamase superfamily domain HMPREF9243_1043 PF00753 Metallo-beta-lactamase superfamily HMPREF9243_1048 PF00156 Phosphoribosyl transferase domain HMPREF9243_1049 PF01726 LexA DNA binding domain HMPREF9243_1049 PF00717 Peptidase S24-like HMPREF9243_1052 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HMPREF9243_1053 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HMPREF9243_1053 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HMPREF9243_1054 PF01256 Carbohydrate kinase HMPREF9243_1055 PF04073 Aminoacyl-tRNA editing domain HMPREF9243_1056 PF01812 5-formyltetrahydrofolate cyclo-ligase family HMPREF9243_1057 PF10576 Iron-sulfur binding domain of endonuclease III HMPREF9243_1057 PF00633 Helix-hairpin-helix motif HMPREF9243_1057 PF00730 HhH-GPD superfamily base excision DNA repair protein HMPREF9243_1061 PF00781 Diacylglycerol kinase catalytic domain HMPREF9243_1062 PF03706 Lysylphosphatidylglycerol synthase TM region HMPREF9243_1062 PF09924 Uncharacterised conserved protein (DUF2156) HMPREF9243_1064 PF02378 Phosphotransferase system, EIIC HMPREF9243_1064 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HMPREF9243_1064 PF00367 phosphotransferase system, EIIB HMPREF9243_1065 PF00561 alpha/beta hydrolase fold HMPREF9243_1066 PF00753 Metallo-beta-lactamase superfamily HMPREF9243_1068 PF04304 Protein of unknown function (DUF454) HMPREF9243_1074 PF00080 Copper/zinc superoxide dismutase (SODC) HMPREF9243_1075 PF01546 Peptidase family M20/M25/M40 HMPREF9243_1075 PF07687 Peptidase dimerisation domain HMPREF9243_1080 PF00005 ABC transporter HMPREF9243_1080 PF00571 CBS domain HMPREF9243_1081 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1082 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HMPREF9243_1083 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1087 PF00005 ABC transporter HMPREF9243_1087 PF00664 ABC transporter transmembrane region HMPREF9243_1089 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HMPREF9243_1093 PF00890 FAD binding domain HMPREF9243_1093 PF04205 FMN-binding domain HMPREF9243_1093 PF03358 NADPH-dependent FMN reductase HMPREF9243_1094 PF01418 Helix-turn-helix domain, rpiR family HMPREF9243_1094 PF01380 SIS domain HMPREF9243_1095 PF09383 NIL domain HMPREF9243_1095 PF00005 ABC transporter HMPREF9243_1096 PF02653 Branched-chain amino acid transport system / permease component HMPREF9243_1099 PF00004 ATPase family associated with various cellular activities (AAA) HMPREF9243_1099 PF17866 AAA lid domain HMPREF9243_1100 PF01368 DHH family HMPREF9243_1100 PF02833 DHHA2 domain HMPREF9243_1101 PF00521 DNA gyrase/topoisomerase IV, subunit A HMPREF9243_1101 PF03989 DNA gyrase C-terminal domain, beta-propeller HMPREF9243_1102 PF00204 DNA gyrase B HMPREF9243_1102 PF00986 DNA gyrase B subunit, carboxyl terminus HMPREF9243_1102 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9243_1102 PF01751 Toprim domain HMPREF9243_1103 PF06018 CodY GAF-like domain HMPREF9243_1103 PF08222 CodY helix-turn-helix domain HMPREF9243_1104 PF02899 Phage integrase, N-terminal SAM-like domain HMPREF9243_1104 PF00589 Phage integrase family HMPREF9243_1105 PF01751 Toprim domain HMPREF9243_1105 PF01131 DNA topoisomerase HMPREF9243_1105 PF01396 Topoisomerase DNA binding C4 zinc finger HMPREF9243_1106 PF18255 DNA processing protein A sterile alpha motif domain HMPREF9243_1106 PF02481 DNA recombination-mediator protein A HMPREF9243_1107 PF01351 Ribonuclease HII HMPREF9243_1108 PF01926 50S ribosome-binding GTPase HMPREF9243_1109 PF10502 Signal peptidase, peptidase S26 HMPREF9243_1110 PF03572 Peptidase family S41 HMPREF9243_1110 PF17820 PDZ domain HMPREF9243_1110 PF01471 Putative peptidoglycan binding domain HMPREF9243_1111 PF06855 YozE SAM-like fold HMPREF9243_1113 PF00186 Dihydrofolate reductase HMPREF9243_1114 PF00303 Thymidylate synthase HMPREF9243_1115 PF16326 ABC transporter C-terminal domain HMPREF9243_1115 PF00005 ABC transporter HMPREF9243_1115 PF12848 ABC transporter HMPREF9243_1116 PF01268 Formate--tetrahydrofolate ligase HMPREF9243_1119 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HMPREF9243_1121 PF06421 GTP-binding protein LepA C-terminus HMPREF9243_1121 PF03144 Elongation factor Tu domain 2 HMPREF9243_1121 PF00009 Elongation factor Tu GTP binding domain HMPREF9243_1121 PF00679 Elongation factor G C-terminus HMPREF9243_1123 PF13276 HTH-like domain HMPREF9243_1123 PF00665 Integrase core domain HMPREF9243_1123 PF13333 Integrase core domain HMPREF9243_1125 PF01556 DnaJ C terminal domain HMPREF9243_1125 PF00684 DnaJ central domain HMPREF9243_1125 PF00226 DnaJ domain HMPREF9243_1126 PF00012 Hsp70 protein HMPREF9243_1127 PF01025 GrpE HMPREF9243_1128 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HMPREF9243_1128 PF01628 HrcA protein C terminal domain HMPREF9243_1129 PF06574 FAD synthetase HMPREF9243_1129 PF01687 Riboflavin kinase HMPREF9243_1131 PF00270 DEAD/DEAH box helicase HMPREF9243_1131 PF00570 HRDC domain HMPREF9243_1131 PF16124 RecQ zinc-binding HMPREF9243_1131 PF09382 RQC domain HMPREF9243_1131 PF00271 Helicase conserved C-terminal domain HMPREF9243_1132 PF00171 Aldehyde dehydrogenase family HMPREF9243_1133 PF08402 TOBE domain HMPREF9243_1133 PF00005 ABC transporter HMPREF9243_1134 PF02653 Branched-chain amino acid transport system / permease component HMPREF9243_1136 PF02033 Ribosome-binding factor A HMPREF9243_1138 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family HMPREF9243_1139 PF04296 Protein of unknown function (DUF448) HMPREF9243_1140 PF08529 NusA N-terminal domain HMPREF9243_1140 PF00575 S1 RNA binding domain HMPREF9243_1140 PF13184 NusA-like KH domain HMPREF9243_1141 PF17384 RimP C-terminal SH3 domain HMPREF9243_1141 PF02576 RimP N-terminal domain HMPREF9243_1145 PF11490 DNA polymerase III polC-type N-terminus II HMPREF9243_1145 PF14480 DNA polymerase III polC-type N-terminus I HMPREF9243_1145 PF02811 PHP domain HMPREF9243_1145 PF07733 Bacterial DNA polymerase III alpha NTPase domain HMPREF9243_1145 PF00929 Exonuclease HMPREF9243_1145 PF14579 Helix-hairpin-helix motif HMPREF9243_1145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HMPREF9243_1146 PF13180 PDZ domain HMPREF9243_1146 PF02163 Peptidase family M50 HMPREF9243_1149 PF01255 Putative undecaprenyl diphosphate synthase HMPREF9243_1150 PF01765 Ribosome recycling factor HMPREF9243_1151 PF00696 Amino acid kinase family HMPREF9243_1152 PF00889 Elongation factor TS HMPREF9243_1153 PF00318 Ribosomal protein S2 HMPREF9243_1154 PF00132 Bacterial transferase hexapeptide (six repeats) HMPREF9243_1154 PF14602 Hexapeptide repeat of succinyl-transferase HMPREF9243_1154 PF12464 Maltose acetyltransferase HMPREF9243_1155 PF09587 Bacterial capsule synthesis protein PGA_cap HMPREF9243_1156 PF00271 Helicase conserved C-terminal domain HMPREF9243_1156 PF04434 SWIM zinc finger HMPREF9243_1156 PF00176 SNF2 family N-terminal domain HMPREF9243_1161 PF01144 Coenzyme A transferase HMPREF9243_1169 PF00378 Enoyl-CoA hydratase/isomerase HMPREF9243_1170 PF00266 Aminotransferase class-V HMPREF9243_1171 PF05437 Branched-chain amino acid transport protein (AzlD) HMPREF9243_1172 PF03591 AzlC protein HMPREF9243_1177 PF01553 Acyltransferase HMPREF9243_1178 PF03672 Uncharacterised protein family (UPF0154) HMPREF9243_1179 PF00849 RNA pseudouridylate synthase HMPREF9243_1179 PF01479 S4 domain HMPREF9243_1180 PF01252 Signal peptidase (SPase) II HMPREF9243_1183 PF00580 UvrD/REP helicase N-terminal domain HMPREF9243_1183 PF12705 PD-(D/E)XK nuclease superfamily HMPREF9243_1183 PF13361 UvrD-like helicase C-terminal domain HMPREF9243_1185 PF12705 PD-(D/E)XK nuclease superfamily HMPREF9243_1192 PF08323 Starch synthase catalytic domain HMPREF9243_1192 PF00534 Glycosyl transferases group 1 HMPREF9243_1193 PF00483 Nucleotidyl transferase HMPREF9243_1194 PF00483 Nucleotidyl transferase HMPREF9243_1197 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HMPREF9243_1199 PF02645 Uncharacterised protein, DegV family COG1307 HMPREF9243_1203 PF00664 ABC transporter transmembrane region HMPREF9243_1203 PF00005 ABC transporter HMPREF9243_1204 PF00664 ABC transporter transmembrane region HMPREF9243_1204 PF00005 ABC transporter HMPREF9243_1206 PF01016 Ribosomal L27 protein HMPREF9243_1208 PF00829 Ribosomal prokaryotic L21 protein HMPREF9243_1213 PF01979 Amidohydrolase family HMPREF9243_1214 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HMPREF9243_1214 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HMPREF9243_1216 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HMPREF9243_1216 PF00117 Glutamine amidotransferase class-I HMPREF9243_1218 PF00005 ABC transporter HMPREF9243_1219 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1223 PF00005 ABC transporter HMPREF9243_1224 PF13840 ACT domain HMPREF9243_1224 PF00696 Amino acid kinase family HMPREF9243_1225 PF04542 Sigma-70 region 2 HMPREF9243_1225 PF03979 Sigma-70 factor, region 1.1 HMPREF9243_1225 PF00140 Sigma-70 factor, region 1.2 HMPREF9243_1225 PF04545 Sigma-70, region 4 HMPREF9243_1225 PF04539 Sigma-70 region 3 HMPREF9243_1228 PF01926 50S ribosome-binding GTPase HMPREF9243_1229 PF06689 ClpX C4-type zinc finger HMPREF9243_1229 PF10431 C-terminal, D2-small domain, of ClpB protein HMPREF9243_1229 PF07724 AAA domain (Cdc48 subfamily) HMPREF9243_1230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HMPREF9243_1230 PF05697 Bacterial trigger factor protein (TF) HMPREF9243_1230 PF05698 Bacterial trigger factor protein (TF) C-terminus HMPREF9243_1231 PF03838 Recombination protein U HMPREF9243_1232 PF00905 Penicillin binding protein transpeptidase domain HMPREF9243_1232 PF00912 Transglycosylase HMPREF9243_1237 PF03167 Uracil DNA glycosylase superfamily HMPREF9243_1239 PF01451 Low molecular weight phosphotyrosine protein phosphatase HMPREF9243_1240 PF13419 Haloacid dehalogenase-like hydrolase HMPREF9243_1241 PF00005 ABC transporter HMPREF9243_1241 PF12848 ABC transporter HMPREF9243_1242 PF00005 ABC transporter HMPREF9243_1243 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1244 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1245 PF00497 Bacterial extracellular solute-binding proteins, family 3 HMPREF9243_1248 PF00005 ABC transporter HMPREF9243_1248 PF00664 ABC transporter transmembrane region HMPREF9243_1249 PF01594 AI-2E family transporter HMPREF9243_1250 PF00485 Phosphoribulokinase / Uridine kinase family HMPREF9243_1252 PF01521 Iron-sulphur cluster biosynthesis HMPREF9243_1256 PF01926 50S ribosome-binding GTPase HMPREF9243_1257 PF03006 Haemolysin-III related HMPREF9243_1259 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HMPREF9243_1259 PF17770 Ribonuclease J C-terminal domain HMPREF9243_1259 PF00753 Metallo-beta-lactamase superfamily HMPREF9243_1261 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HMPREF9243_1263 PF00464 Serine hydroxymethyltransferase HMPREF9243_1265 PF05175 Methyltransferase small domain HMPREF9243_1265 PF17827 PrmC N-terminal domain HMPREF9243_1266 PF00472 RF-1 domain HMPREF9243_1266 PF03462 PCRF domain HMPREF9243_1267 PF00265 Thymidine kinase HMPREF9243_1268 PF07685 CobB/CobQ-like glutamine amidotransferase domain HMPREF9243_1269 PF08353 Domain of unknown function (DUF1727) HMPREF9243_1269 PF08245 Mur ligase middle domain HMPREF9243_1270 PF01594 AI-2E family transporter HMPREF9243_1271 PF10282 Lactonase, 7-bladed beta-propeller HMPREF9243_1272 PF02673 Bacitracin resistance protein BacA HMPREF9243_1273 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HMPREF9243_1273 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HMPREF9243_1275 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HMPREF9243_1275 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HMPREF9243_1276 PF01895 PhoU domain HMPREF9243_1277 PF07690 Major Facilitator Superfamily HMPREF9243_1278 PF00156 Phosphoribosyl transferase domain HMPREF9243_1279 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HMPREF9243_1283 PF02311 AraC-like ligand binding domain HMPREF9243_1283 PF12833 Helix-turn-helix domain HMPREF9243_1284 PF01668 SmpB protein HMPREF9243_1285 PF08206 Ribonuclease B OB domain HMPREF9243_1285 PF00575 S1 RNA binding domain HMPREF9243_1285 PF00773 RNB domain HMPREF9243_1285 PF17876 Cold shock domain HMPREF9243_1288 PF01842 ACT domain HMPREF9243_1288 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HMPREF9243_1288 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HMPREF9243_1289 PF00266 Aminotransferase class-V HMPREF9243_1291 PF13344 Haloacid dehalogenase-like hydrolase HMPREF9243_1294 PF00113 Enolase, C-terminal TIM barrel domain HMPREF9243_1294 PF03952 Enolase, N-terminal domain HMPREF9243_1295 PF00121 Triosephosphate isomerase HMPREF9243_1296 PF00162 Phosphoglycerate kinase HMPREF9243_1297 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HMPREF9243_1297 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HMPREF9243_1298 PF04198 Putative sugar-binding domain HMPREF9243_1299 PF00574 Clp protease HMPREF9243_1304 PF03180 NLPA lipoprotein HMPREF9243_1309 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HMPREF9243_1309 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF9243_1310 PF00294 pfkB family carbohydrate kinase HMPREF9243_1311 PF00455 DeoR C terminal sensor domain HMPREF9243_1311 PF08220 DeoR-like helix-turn-helix domain HMPREF9243_1338 PF00342 Phosphoglucose isomerase HMPREF9243_1339 PF00575 S1 RNA binding domain HMPREF9243_1340 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HMPREF9243_1341 PF02681 Divergent PAP2 family HMPREF9243_1342 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF9243_1343 PF07261 Replication initiation and membrane attachment HMPREF9243_1344 PF00155 Aminotransferase class I and II HMPREF9243_1347 PF00929 Exonuclease HMPREF9243_1347 PF13307 Helicase C-terminal domain HMPREF9243_1350 PF05173 Dihydrodipicolinate reductase, C-terminus HMPREF9243_1350 PF01113 Dihydrodipicolinate reductase, N-terminus HMPREF9243_1352 PF00216 Bacterial DNA-binding protein HMPREF9243_1353 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HMPREF9243_1353 PF01926 50S ribosome-binding GTPase HMPREF9243_1354 PF00575 S1 RNA binding domain HMPREF9243_1355 PF02224 Cytidylate kinase HMPREF9243_1357 PF00270 DEAD/DEAH box helicase HMPREF9243_1357 PF00271 Helicase conserved C-terminal domain HMPREF9243_1361 PF12822 ECF transporter, substrate-specific component HMPREF9243_1363 PF01479 S4 domain HMPREF9243_1363 PF00849 RNA pseudouridylate synthase HMPREF9243_1364 PF04079 Segregation and condensation complex subunit ScpB HMPREF9243_1368 PF02146 Sir2 family HMPREF9243_1370 PF00589 Phage integrase family HMPREF9243_1370 PF02899 Phage integrase, N-terminal SAM-like domain HMPREF9243_1371 PF17783 CvfB-like winged helix domain HMPREF9243_1371 PF13509 S1 domain HMPREF9243_1372 PF02887 Pyruvate kinase, alpha/beta domain HMPREF9243_1372 PF00224 Pyruvate kinase, barrel domain HMPREF9243_1372 PF00391 PEP-utilising enzyme, mobile domain HMPREF9243_1373 PF00365 Phosphofructokinase HMPREF9243_1374 PF02811 PHP domain HMPREF9243_1374 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HMPREF9243_1374 PF01336 OB-fold nucleic acid binding domain HMPREF9243_1374 PF07733 Bacterial DNA polymerase III alpha NTPase domain HMPREF9243_1374 PF14579 Helix-hairpin-helix motif HMPREF9243_1376 PF05491 RuvB C-terminal winged helix domain HMPREF9243_1376 PF17864 RuvB AAA lid domain HMPREF9243_1376 PF05496 Holliday junction DNA helicase RuvB P-loop domain HMPREF9243_1377 PF01330 RuvA N terminal domain HMPREF9243_1377 PF07499 RuvA, C-terminal domain HMPREF9243_1378 PF01641 SelR domain HMPREF9243_1379 PF01119 DNA mismatch repair protein, C-terminal domain HMPREF9243_1379 PF08676 MutL C terminal dimerisation domain HMPREF9243_1380 PF01624 MutS domain I HMPREF9243_1380 PF05188 MutS domain II HMPREF9243_1380 PF05190 MutS family domain IV HMPREF9243_1380 PF00488 MutS domain V HMPREF9243_1380 PF05192 MutS domain III HMPREF9243_1381 PF00300 Histidine phosphatase superfamily (branch 1) HMPREF9243_1386 PF01966 HD domain HMPREF9243_1386 PF00013 KH domain HMPREF9243_1386 PF12072 Domain of unknown function (DUF3552) HMPREF9243_1387 PF00154 recA bacterial DNA recombination protein HMPREF9243_1388 PF00994 Probable molybdopterin binding domain HMPREF9243_1388 PF18146 Damage-inducible protein CinA KH domain HMPREF9243_1388 PF02464 Competence-damaged protein HMPREF9243_1389 PF01066 CDP-alcohol phosphatidyltransferase HMPREF9243_1391 PF00708 Acylphosphatase HMPREF9243_1392 PF02096 60Kd inner membrane protein HMPREF9243_1393 PF00486 Transcriptional regulatory protein, C terminal HMPREF9243_1393 PF00072 Response regulator receiver domain HMPREF9243_1394 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HMPREF9243_1394 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HMPREF9243_1396 PF02568 Thiamine biosynthesis protein (ThiI) HMPREF9243_1396 PF02926 THUMP domain HMPREF9243_1397 PF00266 Aminotransferase class-V HMPREF9243_1398 PF06160 Septation ring formation regulator, EzrA HMPREF9243_1399 PF00163 Ribosomal protein S4/S9 N-terminal domain HMPREF9243_1399 PF01479 S4 domain HMPREF9243_1400 PF01048 Phosphorylase superfamily HMPREF9243_1402 PF00293 NUDIX domain HMPREF9243_1404 PF00665 Integrase core domain HMPREF9243_1404 PF13333 Integrase core domain HMPREF9243_1404 PF13276 HTH-like domain HMPREF9243_1406 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF9243_1406 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HMPREF9243_1408 PF06827 Zinc finger found in FPG and IleRS HMPREF9243_1408 PF00133 tRNA synthetases class I (I, L, M and V) HMPREF9243_1408 PF08264 Anticodon-binding domain of tRNA HMPREF9243_1410 PF05103 DivIVA protein HMPREF9243_1411 PF01479 S4 domain HMPREF9243_1411 PF17774 Putative RNA-binding domain in YlmH HMPREF9243_1412 PF02325 YGGT family HMPREF9243_1413 PF01168 Alanine racemase, N-terminal domain HMPREF9243_1414 PF00091 Tubulin/FtsZ family, GTPase domain HMPREF9243_1414 PF12327 FtsZ family, C-terminal domain HMPREF9243_1415 PF02491 SHS2 domain inserted in FTSA HMPREF9243_1415 PF11983 Membrane-attachment and polymerisation-promoting switch HMPREF9243_1416 PF03799 Cell division protein FtsQ HMPREF9243_1416 PF08478 POTRA domain, FtsQ-type HMPREF9243_1417 PF03033 Glycosyltransferase family 28 N-terminal domain HMPREF9243_1417 PF04101 Glycosyltransferase family 28 C-terminal domain HMPREF9243_1418 PF08245 Mur ligase middle domain HMPREF9243_1418 PF02875 Mur ligase family, glutamate ligase domain HMPREF9243_1419 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HMPREF9243_1419 PF00953 Glycosyl transferase family 4 HMPREF9243_1422 PF01795 MraW methylase family HMPREF9243_1426 PF01783 Ribosomal L32p protein family HMPREF9243_1428 PF05636 HIGH Nucleotidyl Transferase HMPREF9243_1429 PF13649 Methyltransferase domain HMPREF9243_1431 PF01966 HD domain HMPREF9243_1432 PF01467 Cytidylyltransferase-like HMPREF9243_1433 PF01985 CRS1 / YhbY (CRM) domain HMPREF9243_1434 PF01926 50S ribosome-binding GTPase HMPREF9243_1436 PF00288 GHMP kinases N terminal domain HMPREF9243_1436 PF08544 GHMP kinases C terminal HMPREF9243_1437 PF00742 Homoserine dehydrogenase HMPREF9243_1437 PF03447 Homoserine dehydrogenase, NAD binding domain HMPREF9243_1437 PF01842 ACT domain HMPREF9243_1438 PF02875 Mur ligase family, glutamate ligase domain HMPREF9243_1438 PF08245 Mur ligase middle domain HMPREF9243_1440 PF13439 Glycosyltransferase Family 4 HMPREF9243_1440 PF00534 Glycosyl transferases group 1 HMPREF9243_1441 PF05524 PEP-utilising enzyme, N-terminal HMPREF9243_1441 PF00391 PEP-utilising enzyme, mobile domain HMPREF9243_1441 PF02896 PEP-utilising enzyme, TIM barrel domain HMPREF9243_1442 PF00381 PTS HPr component phosphorylation site HMPREF9243_1443 PF17871 AAA lid domain HMPREF9243_1443 PF07724 AAA domain (Cdc48 subfamily) HMPREF9243_1443 PF10431 C-terminal, D2-small domain, of ClpB protein HMPREF9243_1443 PF00004 ATPase family associated with various cellular activities (AAA) HMPREF9243_1445 PF00571 CBS domain HMPREF9243_1445 PF00478 IMP dehydrogenase / GMP reductase domain HMPREF9243_1446 PF03144 Elongation factor Tu domain 2 HMPREF9243_1446 PF00009 Elongation factor Tu GTP binding domain HMPREF9243_1446 PF16658 Class II release factor RF3, C-terminal domain HMPREF9243_1447 PF00005 ABC transporter HMPREF9243_1448 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1449 PF01813 ATP synthase subunit D HMPREF9243_1450 PF02874 ATP synthase alpha/beta family, beta-barrel domain HMPREF9243_1450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HMPREF9243_1451 PF02874 ATP synthase alpha/beta family, beta-barrel domain HMPREF9243_1451 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HMPREF9243_1451 PF16886 ATPsynthase alpha/beta subunit N-term extension HMPREF9243_1452 PF01990 ATP synthase (F/14-kDa) subunit HMPREF9243_1453 PF01992 ATP synthase (C/AC39) subunit HMPREF9243_1455 PF00137 ATP synthase subunit C HMPREF9243_1456 PF01496 V-type ATPase 116kDa subunit family HMPREF9243_1458 PF13673 Acetyltransferase (GNAT) domain HMPREF9243_1460 PF04204 Homoserine O-succinyltransferase HMPREF9243_1462 PF03448 MgtE intracellular N domain HMPREF9243_1462 PF01769 Divalent cation transporter HMPREF9243_1462 PF00571 CBS domain HMPREF9243_1463 PF00849 RNA pseudouridylate synthase HMPREF9243_1464 PF01513 ATP-NAD kinase HMPREF9243_1465 PF01928 CYTH domain HMPREF9243_1470 PF03960 ArsC family HMPREF9243_1471 PF05389 Negative regulator of genetic competence (MecA) HMPREF9243_1473 PF03180 NLPA lipoprotein HMPREF9243_1474 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1475 PF09383 NIL domain HMPREF9243_1475 PF00005 ABC transporter HMPREF9243_1476 PF00210 Ferritin-like domain HMPREF9243_1477 PF00453 Ribosomal protein L20 HMPREF9243_1478 PF05198 Translation initiation factor IF-3, N-terminal domain HMPREF9243_1478 PF00707 Translation initiation factor IF-3, C-terminal domain HMPREF9243_1480 PF07687 Peptidase dimerisation domain HMPREF9243_1480 PF01546 Peptidase family M20/M25/M40 HMPREF9243_1481 PF01661 Macro domain HMPREF9243_1483 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HMPREF9243_1483 PF02824 TGS domain HMPREF9243_1483 PF03129 Anticodon binding domain HMPREF9243_1483 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HMPREF9243_1485 PF01695 IstB-like ATP binding protein HMPREF9243_1485 PF07319 Primosomal protein DnaI N-terminus HMPREF9243_1488 PF03477 ATP cone domain HMPREF9243_1489 PF01121 Dephospho-CoA kinase HMPREF9243_1492 PF01367 5'-3' exonuclease, C-terminal SAM fold HMPREF9243_1492 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HMPREF9243_1492 PF00476 DNA polymerase family A HMPREF9243_1494 PF01476 LysM domain HMPREF9243_1494 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HMPREF9243_1495 PF06962 Putative rRNA methylase HMPREF9243_1499 PF01380 SIS domain HMPREF9243_1501 PF00133 tRNA synthetases class I (I, L, M and V) HMPREF9243_1501 PF08264 Anticodon-binding domain of tRNA HMPREF9243_1501 PF10458 Valyl tRNA synthetase tRNA binding arm HMPREF9243_1502 PF02245 Methylpurine-DNA glycosylase (MPG) HMPREF9243_1503 PF00581 Rhodanese-like domain HMPREF9243_1504 PF00480 ROK family HMPREF9243_1505 PF01694 Rhomboid family HMPREF9243_1506 PF00471 Ribosomal protein L33 HMPREF9243_1512 PF00270 DEAD/DEAH box helicase HMPREF9243_1512 PF00271 Helicase conserved C-terminal domain HMPREF9243_1513 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HMPREF9243_1513 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HMPREF9243_1514 PF02272 DHHA1 domain HMPREF9243_1514 PF01368 DHH family HMPREF9243_1515 PF03061 Thioesterase superfamily HMPREF9243_1515 PF07085 DRTGG domain HMPREF9243_1515 PF00571 CBS domain HMPREF9243_1515 PF00392 Bacterial regulatory proteins, gntR family HMPREF9243_1516 PF11799 impB/mucB/samB family C-terminal domain HMPREF9243_1516 PF11798 IMS family HHH motif HMPREF9243_1516 PF00817 impB/mucB/samB family HMPREF9243_1519 PF01702 Queuine tRNA-ribosyltransferase HMPREF9243_1520 PF00665 Integrase core domain HMPREF9243_1520 PF13276 HTH-like domain HMPREF9243_1520 PF13333 Integrase core domain HMPREF9243_1522 PF01702 Queuine tRNA-ribosyltransferase HMPREF9243_1523 PF07724 AAA domain (Cdc48 subfamily) HMPREF9243_1523 PF02861 Clp amino terminal domain, pathogenicity island component HMPREF9243_1523 PF17871 AAA lid domain HMPREF9243_1523 PF00004 ATPase family associated with various cellular activities (AAA) HMPREF9243_1523 PF10431 C-terminal, D2-small domain, of ClpB protein HMPREF9243_1524 PF00004 ATPase family associated with various cellular activities (AAA) HMPREF9243_1524 PF10431 C-terminal, D2-small domain, of ClpB protein HMPREF9243_1524 PF17871 AAA lid domain HMPREF9243_1524 PF07724 AAA domain (Cdc48 subfamily) HMPREF9243_1524 PF02861 Clp amino terminal domain, pathogenicity island component HMPREF9243_1525 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HMPREF9243_1525 PF02817 e3 binding domain HMPREF9243_1525 PF00364 Biotin-requiring enzyme HMPREF9243_1526 PF02780 Transketolase, C-terminal domain HMPREF9243_1526 PF02779 Transketolase, pyrimidine binding domain HMPREF9243_1527 PF00676 Dehydrogenase E1 component HMPREF9243_1528 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HMPREF9243_1528 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF9243_1529 PF03466 LysR substrate binding domain HMPREF9243_1529 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HMPREF9243_1531 PF01575 MaoC like domain HMPREF9243_1532 PF01245 Ribosomal protein L19 HMPREF9243_1533 PF01746 tRNA (Guanine-1)-methyltransferase HMPREF9243_1534 PF05239 PRC-barrel domain HMPREF9243_1534 PF01782 RimM N-terminal domain HMPREF9243_1536 PF00886 Ribosomal protein S16 HMPREF9243_1541 PF00664 ABC transporter transmembrane region HMPREF9243_1541 PF00005 ABC transporter HMPREF9243_1542 PF00005 ABC transporter HMPREF9243_1542 PF00664 ABC transporter transmembrane region HMPREF9243_1544 PF02978 Signal peptide binding domain HMPREF9243_1544 PF02881 SRP54-type protein, helical bundle domain HMPREF9243_1544 PF00448 SRP54-type protein, GTPase domain HMPREF9243_1545 PF04297 Putative helix-turn-helix protein, YlxM / p13 like HMPREF9243_1546 PF02881 SRP54-type protein, helical bundle domain HMPREF9243_1546 PF00448 SRP54-type protein, GTPase domain HMPREF9243_1548 PF06470 SMC proteins Flexible Hinge Domain HMPREF9243_1548 PF02463 RecF/RecN/SMC N terminal domain HMPREF9243_1550 PF00550 Phosphopantetheine attachment site HMPREF9243_1551 PF02504 Fatty acid synthesis protein HMPREF9243_1552 PF00270 DEAD/DEAH box helicase HMPREF9243_1552 PF00271 Helicase conserved C-terminal domain HMPREF9243_1552 PF17191 RecG wedge domain HMPREF9243_1554 PF02734 DAK2 domain HMPREF9243_1554 PF13684 Dihydroxyacetone kinase family HMPREF9243_1555 PF03780 Asp23 family, cell envelope-related function HMPREF9243_1557 PF00834 Ribulose-phosphate 3 epimerase family HMPREF9243_1558 PF03193 RsgA GTPase HMPREF9243_1558 PF16745 RsgA N-terminal domain HMPREF9243_1559 PF03793 PASTA domain HMPREF9243_1559 PF00069 Protein kinase domain HMPREF9243_1561 PF01189 16S rRNA methyltransferase RsmB/F HMPREF9243_1561 PF01029 NusB family HMPREF9243_1562 PF00551 Formyl transferase HMPREF9243_1562 PF02911 Formyl transferase, C-terminal domain HMPREF9243_1564 PF00271 Helicase conserved C-terminal domain HMPREF9243_1564 PF18074 Primosomal protein N C-terminal domain HMPREF9243_1564 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HMPREF9243_1564 PF17764 3′ DNA-binding domain (3′BD) HMPREF9243_1564 PF04851 Type III restriction enzyme, res subunit HMPREF9243_1565 PF01192 RNA polymerase Rpb6 HMPREF9243_1569 PF13396 Phospholipase_D-nuclease N-terminal HMPREF9243_1569 PF13091 PLD-like domain HMPREF9243_1571 PF00753 Metallo-beta-lactamase superfamily HMPREF9243_1571 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HMPREF9243_1571 PF17770 Ribonuclease J C-terminal domain HMPREF9243_1572 PF01118 Semialdehyde dehydrogenase, NAD binding domain HMPREF9243_1572 PF02774 Semialdehyde dehydrogenase, dimerisation domain HMPREF9243_1573 PF00575 S1 RNA binding domain HMPREF9243_1573 PF00013 KH domain HMPREF9243_1573 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HMPREF9243_1573 PF01138 3' exoribonuclease family, domain 1 HMPREF9243_1573 PF03725 3' exoribonuclease family, domain 2 HMPREF9243_1574 PF00312 Ribosomal protein S15 HMPREF9243_1575 PF01569 PAP2 superfamily HMPREF9243_1576 PF17757 UvrB interaction domain HMPREF9243_1576 PF04851 Type III restriction enzyme, res subunit HMPREF9243_1576 PF00271 Helicase conserved C-terminal domain HMPREF9243_1576 PF02151 UvrB/uvrC motif HMPREF9243_1576 PF12344 Ultra-violet resistance protein B HMPREF9243_1577 PF01649 Ribosomal protein S20 HMPREF9243_1580 PF03772 Competence protein HMPREF9243_1580 PF13567 Domain of unknown function (DUF4131) HMPREF9243_1580 PF00753 Metallo-beta-lactamase superfamily HMPREF9243_1581 PF10531 SLBB domain HMPREF9243_1585 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) HMPREF9243_1586 PF00364 Biotin-requiring enzyme HMPREF9243_1586 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HMPREF9243_1586 PF02436 Conserved carboxylase domain HMPREF9243_1586 PF02785 Biotin carboxylase C-terminal domain HMPREF9243_1586 PF00289 Biotin carboxylase, N-terminal domain HMPREF9243_1586 PF00682 HMGL-like HMPREF9243_1587 PF01098 Cell cycle protein HMPREF9243_1590 PF00459 Inositol monophosphatase family HMPREF9243_1591 PF05256 Uncharacterised protein family (UPF0223) HMPREF9243_1592 PF00849 RNA pseudouridylate synthase HMPREF9243_1592 PF01479 S4 domain HMPREF9243_1593 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1594 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1595 PF00497 Bacterial extracellular solute-binding proteins, family 3 HMPREF9243_1596 PF00005 ABC transporter HMPREF9243_1599 PF13276 HTH-like domain HMPREF9243_1599 PF13333 Integrase core domain HMPREF9243_1599 PF00665 Integrase core domain HMPREF9243_1600 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF9243_1600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HMPREF9243_1601 PF02817 e3 binding domain HMPREF9243_1601 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HMPREF9243_1601 PF00364 Biotin-requiring enzyme HMPREF9243_1602 PF02780 Transketolase, C-terminal domain HMPREF9243_1602 PF02779 Transketolase, pyrimidine binding domain HMPREF9243_1603 PF00676 Dehydrogenase E1 component HMPREF9243_1604 PF01327 Polypeptide deformylase HMPREF9243_1605 PF02441 Flavoprotein HMPREF9243_1605 PF04127 DNA / pantothenate metabolism flavoprotein HMPREF9243_1606 PF00291 Pyridoxal-phosphate dependent enzyme HMPREF9243_1607 PF01386 Ribosomal L25p family HMPREF9243_1607 PF14693 Ribosomal protein TL5, C-terminal domain HMPREF9243_1608 PF03601 Conserved hypothetical protein 698 HMPREF9243_1609 PF17425 Arylsulfotransferase Ig-like domain HMPREF9243_1609 PF05935 Arylsulfotransferase (ASST) HMPREF9243_1610 PF00085 Thioredoxin HMPREF9243_1615 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase HMPREF9243_1615 PF00756 Putative esterase HMPREF9243_1617 PF00368 Hydroxymethylglutaryl-coenzyme A reductase HMPREF9243_1618 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal HMPREF9243_1618 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal HMPREF9243_1619 PF00005 ABC transporter HMPREF9243_1619 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HMPREF9243_1620 PF00005 ABC transporter HMPREF9243_1620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HMPREF9243_1621 PF12911 N-terminal TM domain of oligopeptide transport permease C HMPREF9243_1621 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1622 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1626 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF9243_1627 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF9243_1628 PF01546 Peptidase family M20/M25/M40 HMPREF9243_1629 PF00557 Metallopeptidase family M24 HMPREF9243_1629 PF01321 Creatinase/Prolidase N-terminal domain HMPREF9243_1631 PF02773 S-adenosylmethionine synthetase, C-terminal domain HMPREF9243_1631 PF00438 S-adenosylmethionine synthetase, N-terminal domain HMPREF9243_1631 PF02772 S-adenosylmethionine synthetase, central domain HMPREF9243_1632 PF01451 Low molecular weight phosphotyrosine protein phosphatase HMPREF9243_1633 PF01168 Alanine racemase, N-terminal domain HMPREF9243_1633 PF00842 Alanine racemase, C-terminal domain HMPREF9243_1634 PF00701 Dihydrodipicolinate synthetase family HMPREF9243_1640 PF00696 Amino acid kinase family HMPREF9243_1641 PF00171 Aldehyde dehydrogenase family HMPREF9243_1644 PF13614 AAA domain HMPREF9243_1645 PF02706 Chain length determinant protein HMPREF9243_1647 PF00293 NUDIX domain HMPREF9243_1648 PF02645 Uncharacterised protein, DegV family COG1307 HMPREF9243_1649 PF02645 Uncharacterised protein, DegV family COG1307 HMPREF9243_1650 PF00478 IMP dehydrogenase / GMP reductase domain HMPREF9243_1652 PF03816 Cell envelope-related transcriptional attenuator domain HMPREF9243_1653 PF00557 Metallopeptidase family M24 HMPREF9243_1655 PF00258 Flavodoxin HMPREF9243_1657 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF9243_1658 PF01522 Polysaccharide deacetylase HMPREF9243_1658 PF00457 Glycosyl hydrolases family 11 HMPREF9243_1658 PF03422 Carbohydrate binding module (family 6) HMPREF9243_1659 PF00535 Glycosyl transferase family 2 HMPREF9243_1659 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HMPREF9243_1661 PF00535 Glycosyl transferase family 2 HMPREF9243_1662 PF00535 Glycosyl transferase family 2 HMPREF9243_1663 PF00535 Glycosyl transferase family 2 HMPREF9243_1665 PF03102 NeuB family HMPREF9243_1665 PF08666 SAF domain HMPREF9243_1671 PF01522 Polysaccharide deacetylase HMPREF9243_1671 PF00457 Glycosyl hydrolases family 11 HMPREF9243_1675 PF00156 Phosphoribosyl transferase domain HMPREF9243_1675 PF09182 Bacterial purine repressor, N-terminal HMPREF9243_1676 PF00950 ABC 3 transport family HMPREF9243_1677 PF00005 ABC transporter HMPREF9243_1678 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HMPREF9243_1678 PF01297 Zinc-uptake complex component A periplasmic HMPREF9243_1679 PF00288 GHMP kinases N terminal domain HMPREF9243_1679 PF08544 GHMP kinases C terminal HMPREF9243_1680 PF06257 Biofilm formation stimulator VEG HMPREF9243_1683 PF00005 ABC transporter HMPREF9243_1684 PF00398 Ribosomal RNA adenine dimethylase HMPREF9243_1685 PF13331 Domain of unknown function (DUF4093) HMPREF9243_1685 PF01751 Toprim domain HMPREF9243_1686 PF01026 TatD related DNase HMPREF9243_1687 PF08264 Anticodon-binding domain of tRNA HMPREF9243_1687 PF09334 tRNA synthetases class I (M) HMPREF9243_1687 PF01588 Putative tRNA binding domain HMPREF9243_1688 PF01479 S4 domain HMPREF9243_1688 PF00579 tRNA synthetases class I (W and Y) HMPREF9243_1690 PF00689 Cation transporting ATPase, C-terminus HMPREF9243_1690 PF00690 Cation transporter/ATPase, N-terminus HMPREF9243_1694 PF03951 Glutamine synthetase, beta-Grasp domain HMPREF9243_1694 PF00120 Glutamine synthetase, catalytic domain HMPREF9243_1695 PF04298 Putative neutral zinc metallopeptidase HMPREF9243_1699 PF00155 Aminotransferase class I and II HMPREF9243_1700 PF01037 Lrp/AsnC ligand binding domain HMPREF9243_1702 PF02590 Predicted SPOUT methyltransferase HMPREF9243_1703 PF13180 PDZ domain HMPREF9243_1704 PF00753 Metallo-beta-lactamase superfamily HMPREF9243_1708 PF00672 HAMP domain HMPREF9243_1708 PF13426 PAS domain HMPREF9243_1708 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9243_1708 PF00512 His Kinase A (phospho-acceptor) domain HMPREF9243_1709 PF00072 Response regulator receiver domain HMPREF9243_1709 PF00486 Transcriptional regulatory protein, C terminal HMPREF9243_1710 PF05257 CHAP domain HMPREF9243_1714 PF03099 Biotin/lipoate A/B protein ligase family HMPREF9243_1714 PF08279 HTH domain HMPREF9243_1714 PF02237 Biotin protein ligase C terminal domain HMPREF9243_1715 PF02632 BioY family HMPREF9243_1716 PF10437 Bacterial lipoate protein ligase C-terminus HMPREF9243_1716 PF03099 Biotin/lipoate A/B protein ligase family HMPREF9243_1717 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HMPREF9243_1717 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HMPREF9243_1717 PF01189 16S rRNA methyltransferase RsmB/F HMPREF9243_1722 PF01156 Inosine-uridine preferring nucleoside hydrolase HMPREF9243_1723 PF02789 Cytosol aminopeptidase family, N-terminal domain HMPREF9243_1723 PF00883 Cytosol aminopeptidase family, catalytic domain HMPREF9243_1724 PF00756 Putative esterase HMPREF9243_1726 PF03900 Porphobilinogen deaminase, C-terminal domain HMPREF9243_1726 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HMPREF9243_1727 PF10414 Sirohaem synthase dimerisation region HMPREF9243_1727 PF14824 Sirohaem biosynthesis protein central HMPREF9243_1727 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HMPREF9243_1728 PF01923 Cobalamin adenosyltransferase HMPREF9243_1729 PF07685 CobB/CobQ-like glutamine amidotransferase domain HMPREF9243_1730 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HMPREF9243_1731 PF06180 Cobalt chelatase (CbiK) HMPREF9243_1733 PF02571 Precorrin-6x reductase CbiJ/CobK HMPREF9243_1734 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HMPREF9243_1737 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HMPREF9243_1738 PF05175 Methyltransferase small domain HMPREF9243_1739 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HMPREF9243_1740 PF01888 CbiD HMPREF9243_1741 PF02570 Precorrin-8X methylmutase HMPREF9243_1742 PF07685 CobB/CobQ-like glutamine amidotransferase domain HMPREF9243_1742 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HMPREF9243_1744 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF9243_1746 PF03186 CobD/Cbib protein HMPREF9243_1747 PF00155 Aminotransferase class I and II HMPREF9243_1749 PF02654 Cobalamin-5-phosphate synthase HMPREF9243_1750 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HMPREF9243_1752 PF01717 Cobalamin-independent synthase, Catalytic domain HMPREF9243_1752 PF08267 Cobalamin-independent synthase, N-terminal domain HMPREF9243_1753 PF02219 Methylenetetrahydrofolate reductase HMPREF9243_1754 PF00696 Amino acid kinase family HMPREF9243_1757 PF02861 Clp amino terminal domain, pathogenicity island component HMPREF9243_1757 PF00004 ATPase family associated with various cellular activities (AAA) HMPREF9243_1757 PF07724 AAA domain (Cdc48 subfamily) HMPREF9243_1757 PF17871 AAA lid domain HMPREF9243_1757 PF10431 C-terminal, D2-small domain, of ClpB protein HMPREF9243_1758 PF01235 Sodium:alanine symporter family HMPREF9243_1759 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HMPREF9243_1759 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HMPREF9243_1761 PF12833 Helix-turn-helix domain HMPREF9243_1763 PF00731 AIR carboxylase HMPREF9243_1764 PF02540 NAD synthase HMPREF9243_1769 PF13409 Glutathione S-transferase, N-terminal domain HMPREF9243_1771 PF00072 Response regulator receiver domain HMPREF9243_1771 PF00486 Transcriptional regulatory protein, C terminal HMPREF9243_1772 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9243_1772 PF00512 His Kinase A (phospho-acceptor) domain HMPREF9243_1774 PF00005 ABC transporter HMPREF9243_1775 PF03099 Biotin/lipoate A/B protein ligase family HMPREF9243_1775 PF10437 Bacterial lipoate protein ligase C-terminus HMPREF9243_1777 PF01297 Zinc-uptake complex component A periplasmic HMPREF9243_1777 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HMPREF9243_1778 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HMPREF9243_1778 PF02837 Glycosyl hydrolases family 2, sugar binding domain HMPREF9243_1778 PF00703 Glycosyl hydrolases family 2 HMPREF9243_1779 PF08903 Domain of unknown function (DUF1846) HMPREF9243_1781 PF02386 Cation transport protein HMPREF9243_1784 PF00005 ABC transporter HMPREF9243_1785 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1786 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1787 PF12849 PBP superfamily domain HMPREF9243_1788 PF16736 Single Cache-like HMPREF9243_1788 PF00512 His Kinase A (phospho-acceptor) domain HMPREF9243_1788 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9243_1788 PF00989 PAS fold HMPREF9243_1789 PF00072 Response regulator receiver domain HMPREF9243_1789 PF00486 Transcriptional regulatory protein, C terminal HMPREF9243_1791 PF07516 SecA Wing and Scaffold domain HMPREF9243_1791 PF01043 SecA preprotein cross-linking domain HMPREF9243_1791 PF07517 SecA DEAD-like domain HMPREF9243_1791 PF02810 SEC-C motif HMPREF9243_1792 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HMPREF9243_1792 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HMPREF9243_1794 PF00271 Helicase conserved C-terminal domain HMPREF9243_1794 PF04851 Type III restriction enzyme, res subunit HMPREF9243_1795 PF09186 Domain of unknown function (DUF1949) HMPREF9243_1795 PF01205 Uncharacterized protein family UPF0029 HMPREF9243_1796 PF13276 HTH-like domain HMPREF9243_1796 PF13333 Integrase core domain HMPREF9243_1796 PF00665 Integrase core domain HMPREF9243_1798 PF01081 KDPG and KHG aldolase HMPREF9243_1799 PF01712 Deoxynucleoside kinase HMPREF9243_1801 PF00343 Carbohydrate phosphorylase HMPREF9243_1802 PF09180 Prolyl-tRNA synthetase, C-terminal HMPREF9243_1802 PF03129 Anticodon binding domain HMPREF9243_1802 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HMPREF9243_1804 PF00356 Bacterial regulatory proteins, lacI family HMPREF9243_1806 PF08125 Mannitol dehydrogenase C-terminal domain HMPREF9243_1806 PF01232 Mannitol dehydrogenase Rossmann domain HMPREF9243_1807 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HMPREF9243_1808 PF00874 PRD domain HMPREF9243_1808 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HMPREF9243_1808 PF05043 Mga helix-turn-helix domain HMPREF9243_1808 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF9243_1808 PF08279 HTH domain HMPREF9243_1809 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HMPREF9243_1809 PF02378 Phosphotransferase system, EIIC HMPREF9243_1810 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HMPREF9243_1811 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HMPREF9243_1812 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1813 PF00206 Lyase HMPREF9243_1813 PF14698 Argininosuccinate lyase C-terminal HMPREF9243_1814 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1816 PF00171 Aldehyde dehydrogenase family HMPREF9243_1817 PF03606 C4-dicarboxylate anaerobic carrier HMPREF9243_1818 PF01979 Amidohydrolase family HMPREF9243_1819 PF03069 Acetamidase/Formamidase family HMPREF9243_1820 PF00206 Lyase HMPREF9243_1820 PF10397 Adenylosuccinate lyase C-terminus HMPREF9243_1821 PF00709 Adenylosuccinate synthetase HMPREF9243_1822 PF00118 TCP-1/cpn60 chaperonin family HMPREF9243_1823 PF00166 Chaperonin 10 Kd subunit HMPREF9243_1824 PF06971 Putative DNA-binding protein N-terminus HMPREF9243_1824 PF02629 CoA binding domain HMPREF9243_1825 PF16326 ABC transporter C-terminal domain HMPREF9243_1825 PF12848 ABC transporter HMPREF9243_1825 PF00005 ABC transporter HMPREF9243_1827 PF00814 Glycoprotease family HMPREF9243_1828 PF00583 Acetyltransferase (GNAT) family HMPREF9243_1830 PF00814 Glycoprotease family HMPREF9243_1831 PF05979 Bacterial protein of unknown function (DUF896) HMPREF9243_1834 PF03372 Endonuclease/Exonuclease/phosphatase family HMPREF9243_1837 PF00665 Integrase core domain HMPREF9243_1837 PF13333 Integrase core domain HMPREF9243_1837 PF13276 HTH-like domain HMPREF9243_1838 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HMPREF9243_1838 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HMPREF9243_1839 PF05525 Branched-chain amino acid transport protein HMPREF9243_1840 PF13409 Glutathione S-transferase, N-terminal domain HMPREF9243_1850 PF00293 NUDIX domain HMPREF9243_1854 PF16363 GDP-mannose 4,6 dehydratase HMPREF9243_1857 PF00375 Sodium:dicarboxylate symporter family HMPREF9243_1858 PF04474 Protein of unknown function (DUF554) HMPREF9243_1859 PF05525 Branched-chain amino acid transport protein HMPREF9243_1860 PF08000 Bacterial PH domain HMPREF9243_1861 PF00375 Sodium:dicarboxylate symporter family HMPREF9243_1865 PF08239 Bacterial SH3 domain HMPREF9243_1865 PF01520 N-acetylmuramoyl-L-alanine amidase HMPREF9243_1872 PF01116 Fructose-bisphosphate aldolase class-II HMPREF9243_1873 PF01070 FMN-dependent dehydrogenase HMPREF9243_1877 PF00005 ABC transporter HMPREF9243_1878 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9243_1879 PF00072 Response regulator receiver domain HMPREF9243_1879 PF00486 Transcriptional regulatory protein, C terminal HMPREF9243_1883 PF07739 TipAS antibiotic-recognition domain HMPREF9243_1883 PF13411 MerR HTH family regulatory protein HMPREF9243_1886 PF00591 Glycosyl transferase family, a/b domain HMPREF9243_1886 PF02885 Glycosyl transferase family, helical bundle domain HMPREF9243_1889 PF00291 Pyridoxal-phosphate dependent enzyme HMPREF9243_1890 PF00290 Tryptophan synthase alpha chain HMPREF9243_1896 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HMPREF9243_1896 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HMPREF9243_1897 PF00958 GMP synthase C terminal domain HMPREF9243_1897 PF13673 Acetyltransferase (GNAT) domain HMPREF9243_1897 PF13302 Acetyltransferase (GNAT) domain HMPREF9243_1897 PF03352 Methyladenine glycosylase HMPREF9243_1897 PF00117 Glutamine amidotransferase class-I HMPREF9243_1901 PF01032 FecCD transport family HMPREF9243_1902 PF00005 ABC transporter HMPREF9243_1905 PF00248 Aldo/keto reductase family HMPREF9243_1911 PF00005 ABC transporter HMPREF9243_1912 PF00512 His Kinase A (phospho-acceptor) domain HMPREF9243_1912 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9243_1912 PF00672 HAMP domain HMPREF9243_1913 PF00072 Response regulator receiver domain HMPREF9243_1913 PF00486 Transcriptional regulatory protein, C terminal HMPREF9243_1914 PF08361 MAATS-type transcriptional repressor, C-terminal region HMPREF9243_1914 PF00440 Bacterial regulatory proteins, tetR family HMPREF9243_1917 PF02687 FtsX-like permease family HMPREF9243_1917 PF12704 MacB-like periplasmic core domain HMPREF9243_1917 PF00005 ABC transporter HMPREF9243_1924 PF00005 ABC transporter HMPREF9243_1926 PF05958 tRNA (Uracil-5-)-methyltransferase HMPREF9243_1926 PF01938 TRAM domain HMPREF9243_1938 PF00005 ABC transporter HMPREF9243_1938 PF02361 Cobalt transport protein HMPREF9243_1939 PF12558 ATP-binding cassette cobalt transporter HMPREF9243_1939 PF00005 ABC transporter HMPREF9243_1940 PF07155 ECF-type riboflavin transporter, S component HMPREF9243_1941 PF13411 MerR HTH family regulatory protein HMPREF9243_1944 PF01938 TRAM domain HMPREF9243_1944 PF05958 tRNA (Uracil-5-)-methyltransferase HMPREF9243_1946 PF00248 Aldo/keto reductase family HMPREF9243_1947 PF02664 S-Ribosylhomocysteinase (LuxS) HMPREF9243_1948 PF00356 Bacterial regulatory proteins, lacI family HMPREF9243_1949 PF02872 5'-nucleotidase, C-terminal domain HMPREF9243_1949 PF00149 Calcineurin-like phosphoesterase HMPREF9243_1950 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1951 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_1952 PF00005 ABC transporter HMPREF9243_1954 PF07501 G5 domain HMPREF9243_1954 PF00746 LPXTG cell wall anchor motif HMPREF9243_1954 PF17041 E domain HMPREF9243_1954 PF04650 YSIRK type signal peptide HMPREF9243_1955 PF13333 Integrase core domain HMPREF9243_1955 PF13276 HTH-like domain HMPREF9243_1955 PF00665 Integrase core domain HMPREF9243_1957 PF02934 GatB/GatE catalytic domain HMPREF9243_1957 PF02637 GatB domain HMPREF9243_1958 PF01425 Amidase HMPREF9243_1959 PF02686 Glu-tRNAGln amidotransferase C subunit HMPREF9243_1961 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HMPREF9243_1961 PF00533 BRCA1 C Terminus (BRCT) domain HMPREF9243_1961 PF01653 NAD-dependent DNA ligase adenylation domain HMPREF9243_1961 PF03120 NAD-dependent DNA ligase OB-fold domain HMPREF9243_1961 PF12826 Helix-hairpin-helix motif HMPREF9243_1962 PF00580 UvrD/REP helicase N-terminal domain HMPREF9243_1962 PF13361 UvrD-like helicase C-terminal domain HMPREF9243_1964 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HMPREF9243_1964 PF13457 GW (Gly-Tryp) dipeptide domain HMPREF9243_1966 PF03618 Kinase/pyrophosphorylase HMPREF9243_1967 PF00571 CBS domain HMPREF9243_1967 PF08279 HTH domain HMPREF9243_1971 PF00005 ABC transporter HMPREF9243_1972 PF00005 ABC transporter HMPREF9243_1972 PF12399 Branched-chain amino acid ATP-binding cassette transporter HMPREF9243_1973 PF11862 Domain of unknown function (DUF3382) HMPREF9243_1973 PF02653 Branched-chain amino acid transport system / permease component HMPREF9243_1974 PF02653 Branched-chain amino acid transport system / permease component HMPREF9243_1977 PF13458 Periplasmic binding protein HMPREF9243_1979 PF12704 MacB-like periplasmic core domain HMPREF9243_1979 PF02687 FtsX-like permease family HMPREF9243_1979 PF00005 ABC transporter HMPREF9243_1982 PF18073 Rubredoxin metal binding domain HMPREF9243_1983 PF00692 dUTPase HMPREF9243_1988 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HMPREF9243_1988 PF01476 LysM domain HMPREF9243_1989 PF00311 Phosphoenolpyruvate carboxylase HMPREF9243_1991 PF01926 50S ribosome-binding GTPase HMPREF9243_1991 PF06071 Protein of unknown function (DUF933) HMPREF9243_1992 PF06107 Bacterial protein of unknown function (DUF951) HMPREF9243_1993 PF02195 ParB-like nuclease domain HMPREF9243_1993 PF17762 HTH domain found in ParB protein HMPREF9243_1994 PF13614 AAA domain HMPREF9243_1996 PF00005 ABC transporter HMPREF9243_1996 PF13732 Domain of unknown function (DUF4162) HMPREF9243_1997 PF01943 Polysaccharide biosynthesis protein HMPREF9243_1997 PF14667 Polysaccharide biosynthesis C-terminal domain HMPREF9243_1998 PF02388 FemAB family HMPREF9243_2001 PF00005 ABC transporter HMPREF9243_2002 PF01546 Peptidase family M20/M25/M40 HMPREF9243_2002 PF07687 Peptidase dimerisation domain HMPREF9243_2003 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF9243_2004 PF17961 Bacterial Ig domain HMPREF9243_2004 PF05737 Collagen binding domain HMPREF9243_2004 PF01476 LysM domain HMPREF9243_2005 PF02527 rRNA small subunit methyltransferase G HMPREF9243_2006 PF07694 5TMR of 5TMR-LYT HMPREF9243_2006 PF13492 GAF domain HMPREF9243_2006 PF06580 Histidine kinase HMPREF9243_2006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9243_2007 PF04397 LytTr DNA-binding domain HMPREF9243_2007 PF00072 Response regulator receiver domain HMPREF9243_2008 PF03788 LrgA family HMPREF9243_2009 PF04172 LrgB-like family HMPREF9243_2010 PF07690 Major Facilitator Superfamily HMPREF9243_2016 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_2017 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9243_2018 PF00005 ABC transporter HMPREF9243_2018 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HMPREF9243_2020 PF13276 HTH-like domain HMPREF9243_2020 PF00665 Integrase core domain HMPREF9243_2020 PF13333 Integrase core domain HMPREF9243_2021 PF01134 Glucose inhibited division protein A HMPREF9243_2021 PF13932 GidA associated domain HMPREF9243_2022 PF01381 Helix-turn-helix HMPREF9243_2023 PF10396 GTP-binding protein TrmE N-terminus HMPREF9243_2023 PF12631 MnmE helical domain HMPREF9243_2023 PF01926 50S ribosome-binding GTPase HMPREF9243_2024 PF00005 ABC transporter HMPREF9243_2025 PF02361 Cobalt transport protein HMPREF9243_2026 PF02553 Cobalt transport protein component CbiN HMPREF9243_2027 PF01891 Cobalt uptake substrate-specific transmembrane region HMPREF9243_2029 PF00571 CBS domain HMPREF9243_2029 PF01595 Cyclin M transmembrane N-terminal domain HMPREF9243_2029 PF03471 Transporter associated domain HMPREF9243_2030 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF9243_2030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HMPREF9243_2032 PF01594 AI-2E family transporter HMPREF9243_2033 PF01906 Putative heavy-metal-binding HMPREF9243_2037 PF03613 PTS system mannose/fructose/sorbose family IID component HMPREF9243_2038 PF03609 PTS system sorbose-specific iic component HMPREF9243_2039 PF03830 PTS system sorbose subfamily IIB component HMPREF9243_2041 PF04963 Sigma-54 factor, core binding domain HMPREF9243_2041 PF04552 Sigma-54, DNA binding domain HMPREF9243_2041 PF00309 Sigma-54 factor, Activator interacting domain (AID) HMPREF9243_2042 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HMPREF9243_2042 PF02770 Acyl-CoA dehydrogenase, middle domain HMPREF9243_2042 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HMPREF9243_2043 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HMPREF9243_2043 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HMPREF9243_2044 PF01424 R3H domain HMPREF9243_2044 PF14804 Jag N-terminus HMPREF9243_2045 PF02096 60Kd inner membrane protein HMPREF9243_2046 PF00825 Ribonuclease P HMPREF9243_2047 PF00468 Ribosomal protein L34 HMPREF9243_2050 PF00676 Dehydrogenase E1 component HMPREF9243_2051 PF02780 Transketolase, C-terminal domain HMPREF9243_2051 PF02779 Transketolase, pyrimidine binding domain HMPREF9243_2052 PF00364 Biotin-requiring enzyme HMPREF9243_2052 PF02817 e3 binding domain HMPREF9243_2052 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HMPREF9243_2058 PF00444 Ribosomal protein L36