locus_tag old_locus_tag gene Name start end strand product note type ID NCBI HMPREF9243_0001 HMPREF9243_0001 dnaA dnaA 39 1391 + chromosomal replication initiator protein DnaA identified by match to protein family HMM PF00308%3B match to protein family HMM PF08299%3B match to protein family HMM TIGR00362 gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0001 HMPREF9243_0002 HMPREF9243_0002 dnaN dnaN 1639 2790 + DNA polymerase III%2C beta subunit identified by match to protein family HMM PF00712%3B match to protein family HMM PF02767%3B match to protein family HMM PF02768%3B match to protein family HMM TIGR00663 gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0002 HMPREF9243_0003 HMPREF9243_0003 HMPREF9243_0003 3311 4531 - transposase%2C IS116/IS110/IS902 family identified by match to protein family HMM PF02371 gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0003 HMPREF9243_0004 HMPREF9243_0004 HMPREF9243_0004 4902 6236 + putative glycolate oxidase%2C subunit GlcD identified by match to protein family HMM PF01565%3B match to protein family HMM PF02913 gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0004 HMPREF9243_0005 HMPREF9243_0005 yaaA yaaA 6580 6843 + S4 domain protein YaaA identified by match to protein family HMM TIGR02988 gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0005 HMPREF9243_0006 HMPREF9243_0006 recF recF 6833 7951 + DNA replication and repair protein RecF identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00611 gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0006 HMPREF9243_0007 HMPREF9243_0007 gyrB gyrB 7962 9944 + DNA gyrase%2C B subunit identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF01751%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01059 gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0007 HMPREF9243_0008 HMPREF9243_0008 gyrA gyrA 9964 12606 + DNA gyrase%2C A subunit identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01063 gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0008 HMPREF9243_0009 HMPREF9243_0009 HMPREF9243_0009 12980 13885 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0009 HMPREF9243_0010 HMPREF9243_0010 HMPREF9243_0010 13878 15182 + hypothetical protein gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0010 HMPREF9243_0011 HMPREF9243_0011 HMPREF9243_0011 15731 16144 + acetyltransferase%2C GNAT family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00583 pseudogene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0011 HMPREF9243_0012 HMPREF9243_0012 HMPREF9243_0012 16738 16817 - tRNA-Leu tRNA gene11 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0012 HMPREF9243_0013 HMPREF9243_0013 HMPREF9243_0013 16966 17841 - Asparaginase identified by match to protein family HMM PF00710 gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0013 HMPREF9243_0014 HMPREF9243_0014 HMPREF9243_0014 17985 19403 - C4-dicarboxylate anaerobic carrier identified by match to protein family HMM PF03606 gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0014 HMPREF9243_0015 HMPREF9243_0015 HMPREF9243_0015 19396 20697 - amidohydrolase identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891 gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0015 HMPREF9243_0016 HMPREF9243_0016 rpsF rpsF 21031 21333 + ribosomal protein S6 identified by match to protein family HMM PF01250%3B match to protein family HMM TIGR00166 gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0016 HMPREF9243_0017 HMPREF9243_0017 HMPREF9243_0017 21369 21941 + single-strand binding family protein identified by match to protein family HMM PF00436%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00621 gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0017 HMPREF9243_0018 HMPREF9243_0018 rpsR rpsR 21969 22208 + ribosomal protein S18 identified by match to protein family HMM PF01084%3B match to protein family HMM TIGR00165 gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0018 HMPREF9243_0019 HMPREF9243_0019 HMPREF9243_0019 22436 22645 + DNA-binding helix-turn-helix protein identified by match to protein family HMM PF01381 gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0019 HMPREF9243_0020 HMPREF9243_0020 HMPREF9243_0020 22629 23147 + hypothetical protein gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0020 HMPREF9243_0021 HMPREF9243_0021 HMPREF9243_0021 25688 27718 + DHHA1 domain protein identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272 gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0021 HMPREF9243_0022 HMPREF9243_0022 HMPREF9243_0022 27836 28546 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0022 HMPREF9243_0023 HMPREF9243_0023 HMPREF9243_0023 28548 29321 + TIGR00245 family protein identified by match to protein family HMM PF03649%3B match to protein family HMM TIGR00245 gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0023 HMPREF9243_0024 HMPREF9243_0024 HMPREF9243_0024 29335 30114 + TIGR00245 family protein identified by match to protein family HMM PF03649%3B match to protein family HMM TIGR00245 gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0024 HMPREF9243_0025 HMPREF9243_0025 rplI rplI 30248 30700 + ribosomal protein L9 identified by match to protein family HMM PF01281%3B match to protein family HMM PF03948%3B match to protein family HMM TIGR00158 gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0025 HMPREF9243_0026 HMPREF9243_0026 dnaB dnaB 30849 32222 + replicative DNA helicase identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665 gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0026 HMPREF9243_0027 HMPREF9243_0027 HMPREF9243_0027 32368 32440 + tRNA-Lys tRNA gene26 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0027 HMPREF9243_0028 HMPREF9243_0028 fucO fucO 32988 34139 + lactaldehyde reductase identified by match to protein family HMM PF00465%3B match to protein family HMM TIGR02638 gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0028 HMPREF9243_0029 HMPREF9243_0029 HMPREF9243_0029 34529 34918 - hypothetical protein identified by glimmer%3B putative gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0029 HMPREF9243_0030 HMPREF9243_0030 HMPREF9243_0030 35059 36609 - putative membrane protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0030 HMPREF9243_0031 HMPREF9243_0031 HMPREF9243_0031 36885 38030 + succinyl-diaminopimelate desuccinylase identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01910 gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0031 HMPREF9243_0032 HMPREF9243_0032 trpB trpB 38555 39736 - tryptophan synthase%2C beta subunit identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00263 gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0032 HMPREF9243_0033 HMPREF9243_0033 argG argG 40078 41259 - argininosuccinate synthase identified by match to protein family HMM PF00764%3B match to protein family HMM TIGR00032 gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0033 HMPREF9243_0035 HMPREF9243_0035 HMPREF9243_0035 41794 42984 + amidohydrolase family protein identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969 gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0035 HMPREF9243_0036 HMPREF9243_0036 HMPREF9243_0036 43016 44212 + hypothetical protein gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0036 HMPREF9243_0037 HMPREF9243_0037 HMPREF9243_0037 44430 44978 - isochorismatase family protein identified by match to protein family HMM PF00857 gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0037 HMPREF9243_0038 HMPREF9243_0038 HMPREF9243_0038 45168 46112 + hypothetical protein gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0038 HMPREF9243_0039 HMPREF9243_0039 HMPREF9243_0039 46139 46834 - hypothetical protein identified by match to protein family HMM PF06912 gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0039 HMPREF9243_0040 HMPREF9243_0040 HMPREF9243_0040 47003 47716 + glycosyltransferase%2C group 2 family protein identified by match to protein family HMM PF00535 gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0040 HMPREF9243_0041 HMPREF9243_0041 HMPREF9243_0041 48301 49107 + hypothetical protein identified by match to protein family HMM PF06738 gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0041 HMPREF9243_0042 HMPREF9243_0042 HMPREF9243_0042 49100 49576 + hypothetical protein gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0042 HMPREF9243_0043 HMPREF9243_0043 HMPREF9243_0043 49658 50209 + transposase identified by match to protein family HMM PF01527 gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0043 HMPREF9243_0044 HMPREF9243_0044 HMPREF9243_0044 50209 51099 + integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0044 HMPREF9243_0045 HMPREF9243_0045 HMPREF9243_0045 51309 52520 - amidohydrolase identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891 gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0045 HMPREF9243_0046 HMPREF9243_0046 HMPREF9243_0046 52709 53428 + CAAX amino terminal protease family protein identified by match to protein family HMM PF02517 gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0046 HMPREF9243_0047 HMPREF9243_0047 HMPREF9243_0047 53589 54425 + hypothetical protein identified by glimmer%3B putative gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0047 HMPREF9243_0048 HMPREF9243_0048 HMPREF9243_0048 56473 56546 + tRNA-Ile tRNA gene47 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0048 HMPREF9243_0049 HMPREF9243_0049 HMPREF9243_0049 56581 56653 + tRNA-Ala tRNA gene48 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0049 HMPREF9243_0050 HMPREF9243_0050 rr1A rr1A 56820 59720 + 23S ribosomal RNA rRNA gene49 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0050 HMPREF9243_0051 HMPREF9243_0051 rrfA rrfA 59802 59917 + 5S ribosomal RNA rRNA gene50 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0051 HMPREF9243_0052 HMPREF9243_0052 HMPREF9243_0052 59931 60004 + tRNA-Asn tRNA gene51 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0052 HMPREF9243_0053 HMPREF9243_0053 HMPREF9243_0053 60026 60098 + tRNA-Thr tRNA gene52 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0053 HMPREF9243_0054 HMPREF9243_0054 HMPREF9243_0054 60287 61381 + cystathionine gamma-synthase identified by match to protein family HMM PF01053 gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0054 HMPREF9243_0055 HMPREF9243_0055 HMPREF9243_0055 61409 62314 + transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126 gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0055 HMPREF9243_0056 HMPREF9243_0056 HMPREF9243_0056 62404 62712 + hypothetical protein gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0056 HMPREF9243_0057 HMPREF9243_0057 HMPREF9243_0057 62814 63395 + DJ-1 family protein identified by match to protein family HMM PF01965%3B match to protein family HMM TIGR01383 gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0057 HMPREF9243_0058 HMPREF9243_0058 HMPREF9243_0058 63542 63685 + hypothetical protein gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0058 HMPREF9243_0059 HMPREF9243_0059 glmM glmM 64059 65426 - phosphoglucosamine mutase identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880%3B match to protein family HMM TIGR01455 gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0059 HMPREF9243_0060 HMPREF9243_0060 HMPREF9243_0060 65498 66592 - YbbR-like protein identified by match to protein family HMM PF07949 gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0060 HMPREF9243_0061 HMPREF9243_0061 HMPREF9243_0061 66585 67436 - TIGR00159 family protein identified by match to protein family HMM PF02457%3B match to protein family HMM TIGR00159 gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0061 HMPREF9243_0062 HMPREF9243_0062 HMPREF9243_0062 67507 67626 - hypothetical protein identified by glimmer%3B putative gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0062 HMPREF9243_0063 HMPREF9243_0063 HMPREF9243_0063 67667 67747 + tRNA-Tyr tRNA gene62 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0063 HMPREF9243_0064 HMPREF9243_0064 HMPREF9243_0064 67761 67832 + tRNA-Gln tRNA gene63 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0064 HMPREF9243_0065 HMPREF9243_0065 HMPREF9243_0065 67984 68565 - hypothetical protein gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0065 HMPREF9243_0066 HMPREF9243_0066 nadC nadC 68852 69727 + nicotinate-nucleotide diphosphorylase (carboxylating) identified by match to protein family HMM PF01729%3B match to protein family HMM PF02749%3B match to protein family HMM TIGR00078 gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0066 HMPREF9243_0067 HMPREF9243_0067 HMPREF9243_0067 70042 70740 + LysM domain protein identified by match to protein family HMM PF01476 gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0067 HMPREF9243_0068 HMPREF9243_0068 HMPREF9243_0068 70832 71290 + transposase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01527 pseudogene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0068 HMPREF9243_0069 HMPREF9243_0069 HMPREF9243_0069 71265 71384 + conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts pseudogene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0069 HMPREF9243_0070 HMPREF9243_0070 HMPREF9243_0070 71384 72274 + integrase core domain protein identified by match to protein family HMM PF00665 gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0070 HMPREF9243_0072 HMPREF9243_0072 HMPREF9243_0072 72737 73312 + hydroxyethylthiazole kinase family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02110 pseudogene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0072 HMPREF9243_0073 HMPREF9243_0073 HMPREF9243_0073 73315 73635 + hydroxyethylthiazole kinase family protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0073 HMPREF9243_0074 HMPREF9243_0074 thiD thiD 73622 75070 + phosphomethylpyrimidine kinase identified by match to protein family HMM PF02581%3B match to protein family HMM PF08543%3B match to protein family HMM TIGR00097%3B match to protein family HMM TIGR00693 gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0074 HMPREF9243_0075 HMPREF9243_0075 HMPREF9243_0075 75118 75237 - hypothetical protein identified by glimmer%3B putative gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0075 HMPREF9243_0076 HMPREF9243_0076 HMPREF9243_0076 75473 78118 + aldehyde dehydrogenase (NAD) family protein identified by match to protein family HMM PF00171%3B match to protein family HMM PF00465 gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0076 HMPREF9243_0077 HMPREF9243_0077 HMPREF9243_0077 78192 78965 - conserved hypothetical protein%2C YfiH family identified by match to protein family HMM PF02578%3B match to protein family HMM TIGR00726 gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0077 HMPREF9243_0078 HMPREF9243_0078 HMPREF9243_0078 79142 81697 + peptidase M16 inactive domain protein identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193%3B match to protein family HMM PF08367 gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0078 HMPREF9243_0079 HMPREF9243_0079 HMPREF9243_0079 81902 82225 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0079 HMPREF9243_0080 HMPREF9243_0080 HMPREF9243_0080 82225 83115 + integrase core domain protein identified by match to protein family HMM PF00665 gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0080 HMPREF9243_0081 HMPREF9243_0081 femX femX 83331 84593 - aminoacyltransferase FemX identified by match to protein family HMM PF02388 gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0081 HMPREF9243_0082 HMPREF9243_0082 HMPREF9243_0082 84703 85773 - glycosyltransferase%2C group 1 family protein identified by match to protein family HMM PF00534 gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0082 HMPREF9243_0083 HMPREF9243_0083 HMPREF9243_0083 85809 86663 - SNARE-like domain protein identified by match to protein family HMM PF09335 gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0083 HMPREF9243_0084 HMPREF9243_0084 HMPREF9243_0084 86955 87641 + response regulator receiver domain protein identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0084 HMPREF9243_0085 HMPREF9243_0085 HMPREF9243_0085 87984 89141 + ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0085 HMPREF9243_0086 HMPREF9243_0086 HMPREF9243_0086 89125 90492 + serine-type D-Ala-D-Ala carboxypeptidase identified by match to protein family HMM PF00144%3B match to protein family HMM PF00768 gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0086 HMPREF9243_0087 HMPREF9243_0087 HMPREF9243_0087 90619 91011 - hypothetical protein gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0087 HMPREF9243_0088 HMPREF9243_0088 HMPREF9243_0088 91026 91487 - LytTr DNA-binding domain protein identified by match to protein family HMM PF04397 gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0088 HMPREF9243_0089 HMPREF9243_0089 HMPREF9243_0089 91672 91800 - hypothetical protein identified by glimmer%3B putative gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0089 HMPREF9243_0090 HMPREF9243_0090 HMPREF9243_0090 91845 92609 - hypothetical protein gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0090 HMPREF9243_0091 HMPREF9243_0091 guaD guaD 92795 94162 - guanine deaminase identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR02967 gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0091 HMPREF9243_0092 HMPREF9243_0092 HMPREF9243_0092 94532 95758 + transporter%2C dicarboxylate/amino acid:cation Na+/H+ symporter family protein identified by match to protein family HMM PF00375 gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0092 HMPREF9243_0094 HMPREF9243_0094 serS serS 96177 97475 + serine--tRNA ligase identified by match to protein family HMM PF00587%3B match to protein family HMM PF02403%3B match to protein family HMM TIGR00414 gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0094 HMPREF9243_0095 HMPREF9243_0095 msrA msrA 97874 98398 + peptide-methionine (S)-S-oxide reductase identified by match to protein family HMM PF01625%3B match to protein family HMM TIGR00401 gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0095 HMPREF9243_0096 HMPREF9243_0096 ilvE ilvE 98815 99843 + branched-chain-amino-acid transaminase identified by match to protein family HMM PF01063%3B match to protein family HMM TIGR01123 gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0096 HMPREF9243_0097 HMPREF9243_0097 HMPREF9243_0097 100104 102302 + copper-exporting ATPase identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01511%3B match to protein family HMM TIGR01525 gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0097 HMPREF9243_0098 HMPREF9243_0098 HMPREF9243_0098 102413 102559 + hypothetical protein identified by glimmer%3B putative gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0098 HMPREF9243_0099 HMPREF9243_0099 HMPREF9243_0099 102595 102864 + hypothetical protein gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0099 HMPREF9243_0100 HMPREF9243_0100 HMPREF9243_0100 103120 104316 + aminotransferase%2C class I/II identified by match to protein family HMM PF00155 gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0100 HMPREF9243_0101 HMPREF9243_0101 HMPREF9243_0101 104444 104806 + transcriptional regulator%2C MerR family identified by match to protein family HMM PF00376 gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0101 HMPREF9243_0102 HMPREF9243_0102 HMPREF9243_0102 104917 106266 + fumarate reductase flavoprotein subunit identified by match to protein family HMM PF00890%3B match to protein family HMM PF01266%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01813 gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0102 HMPREF9243_0103 HMPREF9243_0103 HMPREF9243_0103 106319 106552 + hypothetical protein gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0103 HMPREF9243_0104 HMPREF9243_0104 HMPREF9243_0104 106521 107231 + HAD hydrolase%2C family IA%2C variant 3 identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549 gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0104 HMPREF9243_0105 HMPREF9243_0105 rpiA rpiA 107405 108097 + ribose 5-phosphate isomerase A identified by match to protein family HMM PF06026%3B match to protein family HMM TIGR00021 gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0105 HMPREF9243_0106 HMPREF9243_0106 HMPREF9243_0106 108109 108768 + HAD hydrolase%2C family IA%2C variant 3 identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509 gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0106 HMPREF9243_0107 HMPREF9243_0107 tkt tkt 108972 110969 + transketolase identified by match to protein family HMM PF00456%3B match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00232 gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0107 HMPREF9243_0108 HMPREF9243_0108 fsa fsa 111071 111718 + fructose-6-phosphate aldolase identified by match to protein family HMM PF00923%3B match to protein family HMM TIGR00875 gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0108 HMPREF9243_0109 HMPREF9243_0109 HMPREF9243_0109 112067 112645 - transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0109 HMPREF9243_0110 HMPREF9243_0110 HMPREF9243_0110 112770 113471 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0110 HMPREF9243_0111 HMPREF9243_0111 HMPREF9243_0111 113482 116208 + efflux ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0111 HMPREF9243_0112 HMPREF9243_0112 HMPREF9243_0112 116419 116532 + hypothetical protein identified by glimmer%3B putative gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0112 HMPREF9243_0113 HMPREF9243_0113 HMPREF9243_0113 116585 117208 + nitroreductase family protein identified by match to protein family HMM PF00881 gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0113 HMPREF9243_0114 HMPREF9243_0114 HMPREF9243_0114 117531 118484 + putative thioredoxin-disulfide reductase identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992 gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0114 HMPREF9243_0115 HMPREF9243_0115 HMPREF9243_0115 118541 118852 + putative thioredoxin identified by match to protein family HMM PF00085 gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0115 HMPREF9243_0116 HMPREF9243_0116 HMPREF9243_0116 119168 119956 + inositol monophosphatase family protein identified by match to protein family HMM PF00459 gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0116 HMPREF9243_0117 HMPREF9243_0117 HMPREF9243_0117 120004 120942 - LysR substrate binding domain protein identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0117 HMPREF9243_0118 HMPREF9243_0118 HMPREF9243_0118 121176 121961 + enoyl-CoA hydratase/isomerase family protein identified by match to protein family HMM PF00378 gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0118 HMPREF9243_0119 HMPREF9243_0119 HMPREF9243_0119 122013 122960 + putative enoyl-[acyl-carrier-protein] reductase II identified by match to protein family HMM PF03060 gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0119 HMPREF9243_0120 HMPREF9243_0120 HMPREF9243_0120 123278 124531 + CoA-transferase family III protein identified by match to protein family HMM PF02515 gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0120 HMPREF9243_0121 HMPREF9243_0121 HMPREF9243_0121 124734 125624 - transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126 gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0121 HMPREF9243_0122 HMPREF9243_0122 HMPREF9243_0122 125746 126627 + oxidoreductase%2C aldo/keto reductase family protein identified by match to protein family HMM PF00248 gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0122 HMPREF9243_0123 HMPREF9243_0123 HMPREF9243_0123 126702 127469 + carboxymuconolactone decarboxylase family protein identified by match to protein family HMM PF02627 gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0123 HMPREF9243_0124 HMPREF9243_0124 HMPREF9243_0124 127583 128317 - putative cyclase identified by match to protein family HMM PF04199 gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0124 HMPREF9243_0125 HMPREF9243_0125 HMPREF9243_0125 129021 129695 - hypothetical protein gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0125 HMPREF9243_0126 HMPREF9243_0126 HMPREF9243_0126 129856 130344 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0126 HMPREF9243_0127 HMPREF9243_0127 HMPREF9243_0127 130447 131619 - hypothetical protein gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0127 HMPREF9243_0128 HMPREF9243_0128 HMPREF9243_0128 131786 132001 - hypothetical protein identified by glimmer%3B putative gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0128 HMPREF9243_0129 HMPREF9243_0129 HMPREF9243_0129 132300 133097 + NLPA lipoprotein identified by match to protein family HMM PF03180 gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0129 HMPREF9243_0130 HMPREF9243_0130 HMPREF9243_0130 133099 134070 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0130 HMPREF9243_0131 HMPREF9243_0131 HMPREF9243_0131 134072 134731 + ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0131 HMPREF9243_0132 HMPREF9243_0132 HMPREF9243_0132 134767 135780 + hypothetical protein gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0132 HMPREF9243_0133 HMPREF9243_0133 HMPREF9243_0133 135889 136572 - hypothetical protein gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0133 HMPREF9243_0134 HMPREF9243_0134 HMPREF9243_0134 136871 138976 + hypothetical protein identified by match to protein family HMM PF03235%3B match to protein family HMM PF07510 gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0134 HMPREF9243_0135 HMPREF9243_0135 HMPREF9243_0135 139127 139915 + hypothetical protein gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0135 HMPREF9243_0136 HMPREF9243_0136 HMPREF9243_0136 140074 140238 + conserved domain protein%3B this gene contains a premature stop which may be the result of a sequencing error pseudogene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0136 HMPREF9243_0137 HMPREF9243_0137 HMPREF9243_0137 140440 140847 + conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error pseudogene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0137 HMPREF9243_0138 HMPREF9243_0138 HMPREF9243_0138 140844 141671 + hypothetical protein gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0138 HMPREF9243_0139 HMPREF9243_0139 HMPREF9243_0139 141664 142149 + hypothetical protein gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0139 HMPREF9243_0140 HMPREF9243_0140 HMPREF9243_0140 142146 142880 + BRO family%2C N-terminal domain protein identified by match to protein family HMM PF02498 gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0140 HMPREF9243_0141 HMPREF9243_0141 HMPREF9243_0141 142873 144669 + TraG/TraD family protein identified by match to protein family HMM PF02534 gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0141 HMPREF9243_0142 HMPREF9243_0142 HMPREF9243_0142 144688 144963 + hypothetical protein gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0142 HMPREF9243_0143 HMPREF9243_0143 HMPREF9243_0143 145154 145465 + hypothetical protein gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0143 HMPREF9243_0144 HMPREF9243_0144 HMPREF9243_0144 145467 145682 + hypothetical protein gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0144 HMPREF9243_0145 HMPREF9243_0145 HMPREF9243_0145 145693 146556 + hypothetical protein gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0145 HMPREF9243_0146 HMPREF9243_0146 HMPREF9243_0146 146714 146854 + hypothetical protein gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0146 HMPREF9243_0147 HMPREF9243_0147 HMPREF9243_0147 147157 147405 + hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative pseudogene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0147 HMPREF9243_0148 HMPREF9243_0148 HMPREF9243_0148 147414 148103 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0148 HMPREF9243_0149 HMPREF9243_0149 HMPREF9243_0149 148100 149125 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0149 HMPREF9243_0150 HMPREF9243_0150 HMPREF9243_0150 149128 149577 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0150 HMPREF9243_0151 HMPREF9243_0151 HMPREF9243_0151 149580 151658 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0151 HMPREF9243_0152 HMPREF9243_0152 HMPREF9243_0152 152229 152414 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0152 HMPREF9243_0153 HMPREF9243_0153 HMPREF9243_0153 152440 153984 + copper amine oxidase domain protein identified by match to protein family HMM PF07833 gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0153 HMPREF9243_0154 HMPREF9243_0154 HMPREF9243_0154 154077 154634 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0154 HMPREF9243_0155 HMPREF9243_0155 HMPREF9243_0155 155343 155537 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0155 HMPREF9243_0156 HMPREF9243_0156 HMPREF9243_0156 155530 156120 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF08843 pseudogene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0156 HMPREF9243_0157 HMPREF9243_0157 HMPREF9243_0157 156315 156512 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0157 HMPREF9243_0158 HMPREF9243_0158 HMPREF9243_0158 156740 158326 + DNA topoisomerase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01131 pseudogene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0158 HMPREF9243_0159 HMPREF9243_0159 dcm dcm 158319 159284 + DNA (cytosine-5-)-methyltransferase identified by match to protein family HMM PF00145%3B match to protein family HMM TIGR00675 gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0159 HMPREF9243_0160 HMPREF9243_0160 HMPREF9243_0160 159271 159894 + hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative pseudogene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0160 HMPREF9243_0161 HMPREF9243_0161 HMPREF9243_0161 159966 165566 + helicase C-terminal domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00271%3B match to protein family HMM PF02384 pseudogene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0161 HMPREF9243_0162 HMPREF9243_0162 HMPREF9243_0162 166122 167771 + reverse transcriptase (RNA-dependent DNA polymerase) identified by match to protein family HMM PF00078%3B match to protein family HMM PF08388 gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0162 HMPREF9243_0163 HMPREF9243_0163 HMPREF9243_0163 167810 167886 + gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0163 HMPREF9243_0164 HMPREF9243_0164 HMPREF9243_0164 167944 168303 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0164 HMPREF9243_0165 HMPREF9243_0165 HMPREF9243_0165 168369 169253 + hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative pseudogene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0165 HMPREF9243_0166 HMPREF9243_0166 HMPREF9243_0166 169297 169953 + hypothetical protein gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0166 HMPREF9243_0167 HMPREF9243_0167 HMPREF9243_0167 170093 171208 + DNA (cytosine-5-)-methyltransferase identified by match to protein family HMM PF01555 gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0167 HMPREF9243_0168 HMPREF9243_0168 HMPREF9243_0168 171645 172376 + ribosomal RNA adenine dimethylase family protein identified by match to protein family HMM PF00398%3B match to protein family HMM PF02390 gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0168 HMPREF9243_0169 HMPREF9243_0169 HMPREF9243_0169 172593 173117 + hypothetical protein gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0169 HMPREF9243_0170 HMPREF9243_0170 HMPREF9243_0170 173163 173276 + hypothetical protein gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0170 HMPREF9243_0171 HMPREF9243_0171 HMPREF9243_0171 173298 173720 + hypothetical protein gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0171 HMPREF9243_0172 HMPREF9243_0172 HMPREF9243_0172 174000 174794 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0172 HMPREF9243_0173 HMPREF9243_0173 HMPREF9243_0173 174893 175270 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0173 HMPREF9243_0174 HMPREF9243_0174 HMPREF9243_0174 176508 178463 + putative translation elongation factor G identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231 gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0174 HMPREF9243_0175 HMPREF9243_0175 HMPREF9243_0175 179281 180216 + LD-carboxypeptidase identified by match to protein family HMM PF02016 gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0175 HMPREF9243_0176 HMPREF9243_0176 HMPREF9243_0176 180560 182821 + hypothetical protein gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0176 HMPREF9243_0177 HMPREF9243_0177 HMPREF9243_0177 182835 184166 - relaxase/mobilization nuclease domain protein identified by match to protein family HMM PF03432 gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0177 HMPREF9243_0178 HMPREF9243_0178 HMPREF9243_0178 184693 185685 - hypothetical protein gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0178 HMPREF9243_0179 HMPREF9243_0179 HMPREF9243_0179 186249 186545 - putative toxin-antitoxin system%2C toxin component gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0179 HMPREF9243_0180 HMPREF9243_0180 HMPREF9243_0180 186806 187045 - toxin-antitoxin system%2C antitoxin component%2C Xre family%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0180 HMPREF9243_0181 HMPREF9243_0181 HMPREF9243_0181 187054 187206 - toxin-antitoxin system%2C antitoxin component%2C Xre domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0181 HMPREF9243_0182 HMPREF9243_0182 HMPREF9243_0182 187509 187916 + hypothetical protein gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0182 HMPREF9243_0183 HMPREF9243_0183 HMPREF9243_0183 188186 188362 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0183 HMPREF9243_0184 HMPREF9243_0184 HMPREF9243_0184 188407 188595 + sigma-70%2C region 4%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF04545%3B match to protein family HMM PF08281 pseudogene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0184 HMPREF9243_0185 HMPREF9243_0185 HMPREF9243_0185 189137 189292 + hypothetical protein gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0185 HMPREF9243_0186 HMPREF9243_0186 HMPREF9243_0186 189393 191063 + resolvase%2C N-terminal domain protein identified by match to protein family HMM PF00239%3B match to protein family HMM PF07508 gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0186 HMPREF9243_0187 HMPREF9243_0187 HMPREF9243_0187 191063 192289 + resolvase%2C N-terminal domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00239%3B match to protein family HMM PF07508 pseudogene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0187 HMPREF9243_0188 HMPREF9243_0188 HMPREF9243_0188 192247 192561 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0188 HMPREF9243_0189 HMPREF9243_0189 HMPREF9243_0189 192724 194217 + resolvase%2C N-terminal domain protein identified by match to protein family HMM PF00239%3B match to protein family HMM PF07508 gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0189 HMPREF9243_0190 HMPREF9243_0190 HMPREF9243_0190 194341 195204 + N-6 DNA Methylase identified by match to protein family HMM PF02384 gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0190 HMPREF9243_0191 HMPREF9243_0191 HMPREF9243_0191 195204 196394 + type I restriction modification DNA specificity domain protein identified by match to protein family HMM PF01420 gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0191 HMPREF9243_0192 HMPREF9243_0192 HMPREF9243_0192 196443 196697 - addiction module toxin%2C Txe/YoeB family identified by match to protein family HMM PF06769%3B match to protein family HMM TIGR02116 gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0192 HMPREF9243_0193 HMPREF9243_0193 HMPREF9243_0193 196697 196942 - prevent-host-death family protein identified by match to protein family HMM PF02604%3B match to protein family HMM TIGR01552 gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0193 HMPREF9243_0194 HMPREF9243_0194 HMPREF9243_0194 196997 197917 - site-specific recombinase%2C phage integrase family identified by match to protein family HMM PF00589 gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0194 HMPREF9243_0195 HMPREF9243_0195 HMPREF9243_0195 197983 198987 - type I restriction modification DNA specificity domain protein identified by match to protein family HMM PF01420 gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0195 HMPREF9243_0196 HMPREF9243_0196 hsdR hsdR 199295 202336 + type I site-specific deoxyribonuclease%2C HsdR family identified by match to protein family HMM PF04313%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00348 gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0196 HMPREF9243_0197 HMPREF9243_0197 HMPREF9243_0197 202387 203064 + hypothetical protein identified by glimmer%3B putative gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0197 HMPREF9243_0198 HMPREF9243_0198 HMPREF9243_0198 203442 203588 - prevent-host-death family protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0198 HMPREF9243_0199 HMPREF9243_0199 HMPREF9243_0199 203938 204747 + hypothetical protein gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0199 HMPREF9243_0200 HMPREF9243_0200 HMPREF9243_0200 204787 205227 + hypothetical protein gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0200 HMPREF9243_0201 HMPREF9243_0201 HMPREF9243_0201 205510 206712 + hypothetical protein gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0201 HMPREF9243_0202 HMPREF9243_0202 HMPREF9243_0202 206984 207763 + hypothetical protein identified by glimmer%3B putative gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0202 HMPREF9243_0203 HMPREF9243_0203 HMPREF9243_0203 207908 208492 - DNA-binding helix-turn-helix protein identified by match to protein family HMM PF01381 gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0203 HMPREF9243_0204 HMPREF9243_0204 HMPREF9243_0204 209179 209484 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0204 HMPREF9243_0205 HMPREF9243_0205 HMPREF9243_0205 209484 210101 + DnaD domain protein gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0205 HMPREF9243_0206 HMPREF9243_0206 HMPREF9243_0206 210234 210674 + hypothetical protein identified by glimmer%3B putative gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0206 HMPREF9243_0207 HMPREF9243_0207 HMPREF9243_0207 210740 211291 + transposase identified by match to protein family HMM PF01527 gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0207 HMPREF9243_0208 HMPREF9243_0208 HMPREF9243_0208 211291 212181 + integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0208 HMPREF9243_0209 HMPREF9243_0209 HMPREF9243_0209 212543 213070 + RNA polymerase sigma factor%2C sigma-70 family identified by match to protein family HMM TIGR02937 gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0209 HMPREF9243_0210 HMPREF9243_0210 HMPREF9243_0210 213225 213422 + hypothetical protein gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0210 HMPREF9243_0211 HMPREF9243_0211 HMPREF9243_0211 213453 213689 + hypothetical protein gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0211 HMPREF9243_0212 HMPREF9243_0212 HMPREF9243_0212 213795 214079 + hypothetical protein gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0212 HMPREF9243_0213 HMPREF9243_0213 HMPREF9243_0213 214070 214303 + hypothetical protein gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0213 HMPREF9243_0214 HMPREF9243_0214 HMPREF9243_0214 214278 215129 + Cpl-7 lysozyme C-terminal domain protein identified by match to protein family HMM PF08230 gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0214 HMPREF9243_0215 HMPREF9243_0215 HMPREF9243_0215 215178 215699 - hypothetical protein identified by glimmer%3B putative gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0215 HMPREF9243_0216 HMPREF9243_0216 HMPREF9243_0216 215955 216086 + hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative pseudogene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0216 HMPREF9243_0217 HMPREF9243_0217 HMPREF9243_0217 216129 217421 + FAD binding domain protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00890 pseudogene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0217 HMPREF9243_0218 HMPREF9243_0218 HMPREF9243_0218 217433 217702 + FMN-binding domain protein identified by match to protein family HMM PF04205 gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0218 HMPREF9243_0219 HMPREF9243_0219 HMPREF9243_0219 217924 218682 + oxidoreductase%2C short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659 gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0219 HMPREF9243_0220 HMPREF9243_0220 HMPREF9243_0220 219238 221034 + FAD binding domain protein identified by match to protein family HMM PF00890%3B match to protein family HMM PF01266%3B match to protein family HMM PF04205%3B match to protein family HMM PF07992 gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0220 HMPREF9243_0221 HMPREF9243_0221 HMPREF9243_0221 221112 222002 - LysR substrate binding domain protein identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0221 HMPREF9243_0222 HMPREF9243_0222 aroE aroE 222268 223149 + shikimate dehydrogenase identified by match to protein family HMM PF01488%3B match to protein family HMM PF08501%3B match to protein family HMM TIGR00507 gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0222 HMPREF9243_0223 HMPREF9243_0223 HMPREF9243_0223 223183 224400 + transporter%2C major facilitator family protein identified by match to protein family HMM PF07690 gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0223 HMPREF9243_0224 HMPREF9243_0224 aroD aroD 224415 225173 + 3-dehydroquinate dehydratase%2C type I identified by match to protein family HMM PF01487%3B match to protein family HMM TIGR01093 gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0224 HMPREF9243_0225 HMPREF9243_0225 HMPREF9243_0225 225235 226593 + citrate transporter identified by match to protein family HMM PF03600%3B match to protein family HMM PF06808 gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0225 HMPREF9243_0226 HMPREF9243_0226 HMPREF9243_0226 227001 227252 + conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts pseudogene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0226 HMPREF9243_0227 HMPREF9243_0227 HMPREF9243_0227 227385 227552 + hypothetical protein identified by glimmer%3B putative gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0227 HMPREF9243_0228 HMPREF9243_0228 HMPREF9243_0228 227692 227841 + hypothetical protein identified by glimmer%3B putative gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0228 HMPREF9243_0229 HMPREF9243_0229 murQ murQ 227920 228762 + N-acetylmuramic acid 6-phosphate etherase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01380%3B match to protein family HMM TIGR00274 pseudogene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0229 HMPREF9243_0230 HMPREF9243_0230 HMPREF9243_0230 228759 229142 + PTS family porter%2C EIIB%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00367 pseudogene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0230 HMPREF9243_0231 HMPREF9243_0231 HMPREF9243_0231 229319 230221 + phosphotransferase system%2C EIIC identified by match to protein family HMM PF02378 gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0231 HMPREF9243_0232 HMPREF9243_0232 HMPREF9243_0232 230335 231033 + SIS domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01380 pseudogene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0232 HMPREF9243_0233 HMPREF9243_0233 HMPREF9243_0233 231283 232776 + sensory box histidine kinase gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0233 HMPREF9243_0234 HMPREF9243_0234 HMPREF9243_0234 232780 233517 + response regulator receiver domain protein identified by match to protein family HMM PF00072 gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0234 HMPREF9243_0235 HMPREF9243_0235 HMPREF9243_0235 233653 234720 + transporter%2C auxin efflux carrier (AEC) family protein identified by match to protein family HMM PF03547 gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0235 HMPREF9243_0236 HMPREF9243_0236 pdxB pdxB 234786 235793 + 4-phosphoerythronate dehydrogenase identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826 gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0236 HMPREF9243_0237 HMPREF9243_0237 HMPREF9243_0237 235900 236832 - putative sugar-binding domain protein identified by match to protein family HMM PF00325%3B match to protein family HMM PF04198 gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0237 HMPREF9243_0238 HMPREF9243_0238 HMPREF9243_0238 237061 237933 + transcriptional regulator%2C RpiR family identified by match to protein family HMM PF01380%3B match to protein family HMM PF01418 gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0238 HMPREF9243_0239 HMPREF9243_0239 HMPREF9243_0239 238160 239143 + putative mannose-6-phosphate isomerase%2C class I identified by match to protein family HMM PF01238 gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0239 HMPREF9243_0240 HMPREF9243_0240 hxlA hxlA 239171 239806 + 3-hexulose-6-phosphate synthase identified by match to protein family HMM PF00215%3B match to protein family HMM TIGR03128 gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0240 HMPREF9243_0241 HMPREF9243_0241 HMPREF9243_0241 239809 240372 + putative 6-phospho 3-hexuloisomerase identified by match to protein family HMM PF01380 gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0241 HMPREF9243_0242 HMPREF9243_0242 HMPREF9243_0242 240396 240869 + phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 identified by match to protein family HMM PF00359%3B match to protein family HMM TIGR00848 gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0242 HMPREF9243_0243 HMPREF9243_0243 frwB_1 frwB_1 240882 241196 + fructose-like phosphotransferase enzyme IIB component 2%3B this region contains one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF02379%3B match to protein family HMM TIGR00829 pseudogene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0243 HMPREF9243_0244 HMPREF9243_0244 fruA_1 fruA_1 241213 242259 + PTS system fructose-specific EIIBBC component%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02378%3B match to protein family HMM TIGR01427 pseudogene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0244 HMPREF9243_0245 HMPREF9243_0245 HMPREF9243_0245 242346 243056 + HAD hydrolase%2C family IA%2C variant 1 identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549 gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0245 HMPREF9243_0246 HMPREF9243_0246 HMPREF9243_0246 243235 245184 + phosphotransferase system%2C EIIC identified by match to protein family HMM PF00359%3B match to protein family HMM PF02378%3B match to protein family HMM PF02379%3B match to protein family HMM TIGR00829%3B match to protein family HMM TIGR00848%3B match to protein family HMM TIGR01427 gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0246 HMPREF9243_0247 HMPREF9243_0247 manA manA 245236 246183 + mannose-6-phosphate isomerase%2C class I identified by match to protein family HMM PF01238%3B match to protein family HMM TIGR00218 gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0247 HMPREF9243_0248 HMPREF9243_0248 HMPREF9243_0248 247079 248761 + PRD domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00359%3B match to protein family HMM PF00874%3B match to protein family HMM PF08279 pseudogene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0248 HMPREF9243_0249 HMPREF9243_0249 HMPREF9243_0249 248772 249227 + phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 identified by match to protein family HMM PF00359 gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0249 HMPREF9243_0250 HMPREF9243_0250 HMPREF9243_0250 249242 250582 + PTS system Galactitol-specific IIC component identified by match to protein family HMM PF03611 gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0250 HMPREF9243_0251 HMPREF9243_0251 HMPREF9243_0251 250605 250889 + PTS system%2C Lactose/Cellobiose specific IIB subunit identified by match to protein family HMM PF02302 gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0251 HMPREF9243_0252 HMPREF9243_0252 HMPREF9243_0252 250892 251101 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0252 HMPREF9243_0253 HMPREF9243_0253 HMPREF9243_0253 251116 251409 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0253 HMPREF9243_0254 HMPREF9243_0254 HMPREF9243_0254 251422 251883 + putative ribulose-phosphate 3-epimerase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00834 pseudogene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0254 HMPREF9243_0255 HMPREF9243_0255 HMPREF9243_0255 251957 252073 + hypothetical protein identified by glimmer%3B putative gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0255 HMPREF9243_0256 HMPREF9243_0256 HMPREF9243_0256 252070 252390 + 3-hexulose-6-phosphate isomerase family protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0256 HMPREF9243_0257 HMPREF9243_0257 HMPREF9243_0257 252513 252632 + putative 3-hexulose-6-phosphate isomerase%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0257 HMPREF9243_0258 HMPREF9243_0258 HMPREF9243_0258 252786 254906 + phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 identified by match to protein family HMM PF00359%3B match to protein family HMM PF00874 gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0258 HMPREF9243_0259 HMPREF9243_0259 deoC deoC 254915 255571 + deoxyribose-phosphate aldolase identified by match to protein family HMM PF01791%3B match to protein family HMM TIGR00126 gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0259 HMPREF9243_0260 HMPREF9243_0260 tkt tkt 255626 257620 + transketolase identified by match to protein family HMM PF00456%3B match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00232 gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0260 HMPREF9243_0261 HMPREF9243_0261 HMPREF9243_0261 257692 258057 + phosphoenolpyruvate-dependent sugar PTS family porter%2C EIIA 2%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00359 pseudogene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0261 HMPREF9243_0262 HMPREF9243_0262 HMPREF9243_0262 258148 258435 + PTS system%2C Lactose/Cellobiose specific IIB subunit identified by match to protein family HMM PF02302 gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0262 HMPREF9243_0263 HMPREF9243_0263 HMPREF9243_0263 258481 259833 + putative sugar-specific permease%2C SgaT/UlaA identified by match to protein family HMM PF04215 gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0263 HMPREF9243_0264 HMPREF9243_0264 HMPREF9243_0264 259944 260495 + transposase identified by match to protein family HMM PF01527 gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0264 HMPREF9243_0265 HMPREF9243_0265 HMPREF9243_0265 260495 261385 + integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0265 HMPREF9243_0266 HMPREF9243_0266 HMPREF9243_0266 261421 261540 - hypothetical protein identified by glimmer%3B putative gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0266 HMPREF9243_0267 HMPREF9243_0267 HMPREF9243_0267 261602 262537 - putative sugar-binding domain protein identified by match to protein family HMM PF04198 gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0267 HMPREF9243_0268 HMPREF9243_0268 gatY gatY 262690 263535 + tagatose-bisphosphate aldolase identified by match to protein family HMM PF01116%3B match to protein family HMM TIGR00167 gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0268 HMPREF9243_0269 HMPREF9243_0269 tpiA tpiA 263539 264225 + triose-phosphate isomerase identified by match to protein family HMM PF00121%3B match to protein family HMM TIGR00419 gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0269 HMPREF9243_0270 HMPREF9243_0270 HMPREF9243_0270 264240 264761 + putative secondary thiamine-phosphate synthase enzyme identified by match to protein family HMM PF01894 gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0270 HMPREF9243_0271 HMPREF9243_0271 HMPREF9243_0271 264785 265648 + putative hexulose-6-phosphate isomerase identified by match to protein family HMM PF01261 gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0271 HMPREF9243_0272 HMPREF9243_0272 gnd gnd 265677 267104 + phosphogluconate dehydrogenase (decarboxylating) identified by match to protein family HMM PF00393%3B match to protein family HMM PF03446%3B match to protein family HMM TIGR00873 gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0272 HMPREF9243_0273 HMPREF9243_0273 HMPREF9243_0273 267234 267416 - hypothetical protein gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0273 HMPREF9243_0274 HMPREF9243_0274 HMPREF9243_0274 267704 268063 - transcriptional regulator%2C RpiR family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01418 pseudogene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0274 HMPREF9243_0275 HMPREF9243_0275 eda eda 268228 268857 + 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase identified by match to protein family HMM PF01081%3B match to protein family HMM TIGR01182 gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0275 HMPREF9243_0276 HMPREF9243_0276 pdxB pdxB 268876 269859 + 4-phosphoerythronate dehydrogenase identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826 gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0276 HMPREF9243_0277 HMPREF9243_0277 HMPREF9243_0277 270024 270356 + hypothetical protein identified by glimmer%3B putative gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0277 HMPREF9243_0278 HMPREF9243_0278 gnd gnd 270353 271252 + phosphogluconate dehydrogenase (decarboxylating) identified by match to protein family HMM PF00393%3B match to protein family HMM PF03446%3B match to protein family HMM TIGR00872 gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0278 HMPREF9243_0279 HMPREF9243_0279 HMPREF9243_0279 271281 272099 + PTS system sorbose-specific iic component identified by match to protein family HMM PF03609 gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0279 HMPREF9243_0280 HMPREF9243_0280 HMPREF9243_0280 272116 272973 + PTS system mannose/fructose/sorbose family IID component identified by match to protein family HMM PF03613 gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0280 HMPREF9243_0281 HMPREF9243_0281 HMPREF9243_0281 273024 273518 + PTS system sorbose subfamily IIB component identified by match to protein family HMM PF03830 gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0281 HMPREF9243_0282 HMPREF9243_0282 HMPREF9243_0282 273532 273975 + PTS system fructose IIA component identified by match to protein family HMM PF03610 gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0282 HMPREF9243_0283 HMPREF9243_0283 pdxB pdxB 273975 274910 + 4-phosphoerythronate dehydrogenase identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826 gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0283 HMPREF9243_0284 HMPREF9243_0284 HMPREF9243_0284 274955 275227 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0284 HMPREF9243_0285 HMPREF9243_0285 HMPREF9243_0285 275248 275619 + hypothetical protein gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0285 HMPREF9243_0286 HMPREF9243_0286 HMPREF9243_0286 275626 276516 + hypothetical protein gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0286 HMPREF9243_0287 HMPREF9243_0287 HMPREF9243_0287 276723 277184 + hypothetical protein gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0287 HMPREF9243_0288 HMPREF9243_0288 HMPREF9243_0288 277220 278110 - integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0288 HMPREF9243_0289 HMPREF9243_0289 HMPREF9243_0289 278110 278661 - transposase identified by match to protein family HMM PF01527 gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0289 HMPREF9243_0290 HMPREF9243_0290 HMPREF9243_0290 278770 279705 + transposase identified by match to protein family HMM PF01610 gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0290 HMPREF9243_0291 HMPREF9243_0291 HMPREF9243_0291 280208 281590 + glycosyl hydrolase%2C family 1 identified by match to protein family HMM PF00232 gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0291 HMPREF9243_0292 HMPREF9243_0292 HMPREF9243_0292 281600 282688 + hypothetical protein identified by match to protein family HMM PF05913 gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0292 HMPREF9243_0293 HMPREF9243_0293 HMPREF9243_0293 282685 282801 + hypothetical protein identified by glimmer%3B putative gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0293 HMPREF9243_0294 HMPREF9243_0294 HMPREF9243_0294 282728 284731 + PRD domain protein identified by match to protein family HMM PF00874%3B match to protein family HMM PF05043 gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0294 HMPREF9243_0295 HMPREF9243_0295 HMPREF9243_0295 284750 285061 + PTS system%2C Lactose/Cellobiose specific IIB subunit identified by match to protein family HMM PF02302 gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0295 HMPREF9243_0296 HMPREF9243_0296 licA licA 285271 285390 + lichenan-specific phosphotransferase enzyme IIA component%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0296 HMPREF9243_0297 HMPREF9243_0297 HMPREF9243_0297 285400 285870 + hypothetical protein gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0297 HMPREF9243_0298 HMPREF9243_0298 HMPREF9243_0298 285854 287233 + putative PTS system%2C cellobiose-specific IIC component identified by match to protein family HMM PF02378%3B match to protein family HMM TIGR00410 gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0298 HMPREF9243_0299 HMPREF9243_0299 HMPREF9243_0299 287879 288931 + ABC transporter%2C solute-binding protein identified by match to protein family HMM PF01547 gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0299 HMPREF9243_0300 HMPREF9243_0300 HMPREF9243_0300 289015 290700 + ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0300 HMPREF9243_0301 HMPREF9243_0301 HMPREF9243_0301 290666 291262 + ABC transporter%2C ATP-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005 pseudogene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0301 HMPREF9243_0302 HMPREF9243_0302 HMPREF9243_0302 291259 291714 + putrescine/spermidine ABC transporter ATPase family protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0302 HMPREF9243_0303 HMPREF9243_0303 HMPREF9243_0303 291800 292477 - phosphorylated carbohydrates phosphatase identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549 gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0303 HMPREF9243_0304 HMPREF9243_0304 HMPREF9243_0304 292509 293180 - fructose-6-phosphate aldolase identified by match to protein family HMM PF00923 gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0304 HMPREF9243_0305 HMPREF9243_0305 HMPREF9243_0305 293425 294225 + oxidoreductase%2C short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659 gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0305 HMPREF9243_0306 HMPREF9243_0306 HMPREF9243_0306 294241 296097 + PRD domain protein identified by match to protein family HMM PF00874%3B match to protein family HMM PF05043%3B match to protein family HMM PF08279 gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0306 HMPREF9243_0307 HMPREF9243_0307 HMPREF9243_0307 296094 296576 + glucitol operon activator protein (GutM) identified by match to protein family HMM PF06923 gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0307 HMPREF9243_0308 HMPREF9243_0308 srlA srlA 296580 297134 + PTS system%2C glucitol/sorbitol-specific%2C IIC component identified by match to protein family HMM PF03608%3B match to protein family HMM TIGR00821 gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0308 HMPREF9243_0309 HMPREF9243_0309 HMPREF9243_0309 297146 298165 + PTS system%2C glucitol/sorbitol-specific%2C IIBC component identified by match to protein family HMM PF03612%3B match to protein family HMM PF07663%3B match to protein family HMM TIGR00825 gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0309 HMPREF9243_0310 HMPREF9243_0310 HMPREF9243_0310 298216 298572 + PTS system%2C glucitol/sorbitol-specific%2C IIA component identified by match to protein family HMM PF03829 gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0310 HMPREF9243_0311 HMPREF9243_0311 HMPREF9243_0311 298872 299384 - intracellular protease%2C PfpI family identified by match to protein family HMM PF01965%3B match to protein family HMM TIGR01382 gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0311 HMPREF9243_0312 HMPREF9243_0312 HMPREF9243_0312 299574 299690 - hypothetical protein identified by glimmer%3B putative gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0312 HMPREF9243_0313 HMPREF9243_0313 fldA fldA 299986 301206 + cinnamoyl-CoA:phenyllactate CoA-transferase identified by match to protein family HMM PF02515 gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0313 HMPREF9243_0314 HMPREF9243_0314 HMPREF9243_0314 301388 302320 + putative enoyl-[acyl-carrier-protein] reductase II identified by match to protein family HMM PF03060 gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0314 HMPREF9243_0315 HMPREF9243_0315 HMPREF9243_0315 302503 302721 - hypothetical protein gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0315 HMPREF9243_0316 HMPREF9243_0316 HMPREF9243_0316 302851 304821 - firmicute fructose-1%2C6-bisphosphatase identified by match to protein family HMM PF06874 gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0316 HMPREF9243_0317 HMPREF9243_0317 HMPREF9243_0317 305052 306323 + nucleoside transporter%2C NupC family identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662 gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0317 HMPREF9243_0318 HMPREF9243_0318 HMPREF9243_0318 306507 307424 + Inosine-uridine preferring nucleoside hydrolase identified by match to protein family HMM PF01156 gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0318 HMPREF9243_0319 HMPREF9243_0319 HMPREF9243_0319 307620 307787 + tautomerase enzyme identified by match to protein family HMM PF01361 gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0319 HMPREF9243_0320 HMPREF9243_0320 HMPREF9243_0320 307856 308689 - hypothetical protein identified by glimmer%3B putative gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0320 HMPREF9243_0321 HMPREF9243_0321 HMPREF9243_0321 308689 309300 - hypothetical protein identified by match to protein family HMM PF08006 gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0321 HMPREF9243_0322 HMPREF9243_0322 HMPREF9243_0322 309304 309615 - transcriptional regulator%2C PadR family identified by match to protein family HMM PF03551 gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0322 HMPREF9243_0323 HMPREF9243_0323 HMPREF9243_0323 309926 311818 + Ser/Thr phosphatase family protein identified by match to protein family HMM PF00149 gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0323 HMPREF9243_0324 HMPREF9243_0324 HMPREF9243_0324 312177 313370 + divergent AAA domain protein identified by match to protein family HMM PF04326 gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0324 HMPREF9243_0325 HMPREF9243_0325 HMPREF9243_0325 313412 314557 + hypothetical protein gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0325 HMPREF9243_0326 HMPREF9243_0326 HMPREF9243_0326 314574 315923 + DNA (cytosine-5-)-methyltransferase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01555 pseudogene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0326 HMPREF9243_0327 HMPREF9243_0327 HMPREF9243_0327 316013 316588 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0327 HMPREF9243_0328 HMPREF9243_0328 HMPREF9243_0328 316599 319574 + type III restriction enzyme%2C res subunit identified by match to protein family HMM PF04851 gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0328 HMPREF9243_0329 HMPREF9243_0329 HMPREF9243_0329 320012 320239 - hypothetical protein gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0329 HMPREF9243_0330 HMPREF9243_0330 HMPREF9243_0330 320396 321019 + hypothetical protein gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0330 HMPREF9243_0331 HMPREF9243_0331 HMPREF9243_0331 321172 321396 + hypothetical protein gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0331 HMPREF9243_0332 HMPREF9243_0332 HMPREF9243_0332 321398 321808 + plasmid stabilization system protein%2C RelE/ParE family identified by match to protein family HMM PF05016 gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0332 HMPREF9243_0333 HMPREF9243_0333 HMPREF9243_0333 321931 322458 - hypothetical protein gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0333 HMPREF9243_0334 HMPREF9243_0334 HMPREF9243_0334 322520 323071 + transposase identified by match to protein family HMM PF01527 gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0334 HMPREF9243_0335 HMPREF9243_0335 HMPREF9243_0335 323071 323961 + integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0335 HMPREF9243_0336 HMPREF9243_0336 HMPREF9243_0336 324128 324706 - hypothetical protein gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0336 HMPREF9243_0337 HMPREF9243_0337 uvrA uvrA 325115 327955 + excinuclease ABC%2C A subunit identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00630 gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0337 HMPREF9243_0338 HMPREF9243_0338 sbcD sbcD 328092 329258 + exonuclease SbcCD%2C D subunit identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00619 gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0338 HMPREF9243_0339 HMPREF9243_0339 HMPREF9243_0339 329282 332404 + exonuclease SbcCD%2C C subunit identified by match to protein family HMM PF02463 gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0339 HMPREF9243_0340 HMPREF9243_0340 HMPREF9243_0340 332870 333226 + PspC domain protein identified by match to protein family HMM PF04024 gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0340 HMPREF9243_0341 HMPREF9243_0341 HMPREF9243_0341 333219 333584 + hypothetical protein identified by match to protein family HMM PF04020 gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0341 HMPREF9243_0342 HMPREF9243_0342 hprK hprK 333786 334766 + HPr(Ser) kinase/phosphatase identified by match to protein family HMM PF02603%3B match to protein family HMM PF07475%3B match to protein family HMM TIGR00679 gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0342 HMPREF9243_0343 HMPREF9243_0343 lgt lgt 334763 335659 + prolipoprotein diacylglyceryl transferase identified by match to protein family HMM PF01790%3B match to protein family HMM TIGR00544 gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0343 HMPREF9243_0344 HMPREF9243_0344 gpsA gpsA 335701 336783 + glycerol-3-phosphate dehydrogenase [NAD(P)+] identified by match to protein family HMM PF01210%3B match to protein family HMM PF07479 gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0344 HMPREF9243_0345 HMPREF9243_0345 galU galU 336952 337827 + UTP--glucose-1-phosphate uridylyltransferase identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR01099 gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0345 HMPREF9243_0346 HMPREF9243_0346 trxB trxB 337914 338849 + thioredoxin-disulfide reductase identified by match to protein family HMM PF00070%3B match to protein family HMM PF01266%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01292 gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0346 HMPREF9243_0347 HMPREF9243_0347 HMPREF9243_0347 339377 341851 + Gram-positive signal peptide protein%2C YSIRK family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF04650%3B match to protein family HMM PF05738%3B match to protein family HMM TIGR01168 pseudogene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0347 HMPREF9243_0348 HMPREF9243_0348 HMPREF9243_0348 341802 343379 + collagen triple helix repeat protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01391 pseudogene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0348 HMPREF9243_0349 HMPREF9243_0349 HMPREF9243_0349 343418 348850 + LPXTG-motif cell wall anchor domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM TIGR01167 pseudogene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0349 HMPREF9243_0350 HMPREF9243_0350 HMPREF9243_0350 349029 350270 + transporter%2C major facilitator family protein identified by match to protein family HMM PF07690 gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0350 HMPREF9243_0351 HMPREF9243_0351 HMPREF9243_0351 350507 352228 + phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II identified by match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880 gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0351 HMPREF9243_0352 HMPREF9243_0352 HMPREF9243_0352 352523 353419 + hypothetical protein identified by match to protein family HMM PF03668 gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0352 HMPREF9243_0353 HMPREF9243_0353 HMPREF9243_0353 353416 354420 + hypothetical protein identified by match to protein family HMM PF01933%3B match to protein family HMM TIGR01826 gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0353 HMPREF9243_0354 HMPREF9243_0354 HMPREF9243_0354 354449 355372 + hypothetical protein identified by match to protein family HMM PF02650%3B match to protein family HMM TIGR00647 gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0354 HMPREF9243_0355 HMPREF9243_0355 HMPREF9243_0355 355886 357610 + FAD binding domain protein identified by match to protein family HMM PF00890%3B match to protein family HMM PF01266%3B match to protein family HMM PF04205 gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0355 HMPREF9243_0356 HMPREF9243_0356 HMPREF9243_0356 357671 358147 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0356 HMPREF9243_0357 HMPREF9243_0357 HMPREF9243_0357 358379 358780 - single-strand binding family protein identified by match to protein family HMM PF00436 gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0357 HMPREF9243_0358 HMPREF9243_0358 HMPREF9243_0358 358932 359648 + response regulator receiver domain protein identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0358 HMPREF9243_0359 HMPREF9243_0359 HMPREF9243_0359 359651 361162 + ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0359 HMPREF9243_0360 HMPREF9243_0360 HMPREF9243_0360 361222 361353 + hypothetical protein identified by glimmer%3B putative gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0360 HMPREF9243_0361 HMPREF9243_0361 HMPREF9243_0361 361350 361985 + VanZ-like protein identified by match to protein family HMM PF04892 gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0361 HMPREF9243_0362 HMPREF9243_0362 HMPREF9243_0362 361989 363176 + hypothetical protein gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0362 HMPREF9243_0363 HMPREF9243_0363 HMPREF9243_0363 363522 364412 - integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0363 HMPREF9243_0364 HMPREF9243_0364 HMPREF9243_0364 364412 364963 - transposase identified by match to protein family HMM PF01527 gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0364 HMPREF9243_0365 HMPREF9243_0365 HMPREF9243_0365 365092 366810 + hypothetical protein gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0365 HMPREF9243_0366 HMPREF9243_0366 HMPREF9243_0366 367093 367260 + hypothetical protein identified by glimmer%3B putative gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0366 HMPREF9243_0367 HMPREF9243_0367 HMPREF9243_0367 367445 368203 - oxidoreductase%2C short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659 gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0367 HMPREF9243_0368 HMPREF9243_0368 HMPREF9243_0368 368275 368700 - hypothetical protein gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0368 HMPREF9243_0369 HMPREF9243_0369 HMPREF9243_0369 368898 369587 - hypothetical protein gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0369 HMPREF9243_0370 HMPREF9243_0370 HMPREF9243_0370 370025 370747 + hypothetical protein identified by match to protein family HMM PF03883 gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0370 HMPREF9243_0371 HMPREF9243_0371 ptbA ptbA 370989 371483 + PTS system%2C glucose subfamily%2C IIA component identified by match to protein family HMM PF00358%3B match to protein family HMM TIGR00830 gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0371 HMPREF9243_0372 HMPREF9243_0372 gltX gltX 371645 373126 + glutamate--tRNA ligase identified by match to protein family HMM PF00749%3B match to protein family HMM TIGR00464 gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0372 HMPREF9243_0373 HMPREF9243_0373 HMPREF9243_0373 373244 373609 + hypothetical protein identified by match to protein family HMM PF04343 gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0373 HMPREF9243_0374 HMPREF9243_0374 HMPREF9243_0374 373625 374458 + hypothetical protein gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0374 HMPREF9243_0375 HMPREF9243_0375 HMPREF9243_0375 374480 375394 + ApbE family protein identified by match to protein family HMM PF02424 gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0375 HMPREF9243_0376 HMPREF9243_0376 HMPREF9243_0376 375498 376841 + alpha amylase%2C catalytic domain protein identified by match to protein family HMM PF00128 gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0376 HMPREF9243_0377 HMPREF9243_0377 HMPREF9243_0377 376864 377670 + Cof-like hydrolase identified by match to protein family HMM PF00702%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0377 HMPREF9243_0378 HMPREF9243_0378 HMPREF9243_0378 377722 378354 + hydrolase%2C NUDIX family identified by match to protein family HMM PF00293 gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0378 HMPREF9243_0379 HMPREF9243_0379 HMPREF9243_0379 378415 378927 + hypothetical protein gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0379 HMPREF9243_0380 HMPREF9243_0380 HMPREF9243_0380 379017 379763 + pseudouridylate synthase identified by match to protein family HMM PF00849%3B match to protein family HMM TIGR00093 gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0380 HMPREF9243_0381 HMPREF9243_0381 HMPREF9243_0381 379815 381137 + putative permease identified by match to protein family HMM PF00860 gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0381 HMPREF9243_0382 HMPREF9243_0382 HMPREF9243_0382 381347 382630 + hypothetical protein gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0382 HMPREF9243_0383 HMPREF9243_0383 HMPREF9243_0383 382763 384160 + exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase identified by match to protein family HMM PF02397%3B match to protein family HMM TIGR03025 gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0383 HMPREF9243_0384 HMPREF9243_0384 pncB pncB 384555 386039 + nicotinate phosphoribosyltransferase identified by match to protein family HMM PF04095%3B match to protein family HMM TIGR01513 gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0384 HMPREF9243_0385 HMPREF9243_0385 nadE nadE 386085 386915 + NAD+ synthase identified by match to protein family HMM PF02540%3B match to protein family HMM PF06508%3B match to protein family HMM TIGR00552 gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0385 HMPREF9243_0386 HMPREF9243_0386 cysS cysS 387461 388876 + cysteine--tRNA ligase identified by match to protein family HMM PF01406%3B match to protein family HMM PF09190%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00435 gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0386 HMPREF9243_0387 HMPREF9243_0387 HMPREF9243_0387 388876 389280 + RNase3 domain protein identified by match to protein family HMM PF00636 gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0387 HMPREF9243_0388 HMPREF9243_0388 HMPREF9243_0388 389270 390031 + RNA methyltransferase%2C TrmH family%2C group 3 identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032%3B match to protein family HMM TIGR00186 gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0388 HMPREF9243_0389 HMPREF9243_0389 HMPREF9243_0389 390058 390594 + hypothetical protein identified by match to protein family HMM PF05991 gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0389 HMPREF9243_0390 HMPREF9243_0390 HMPREF9243_0390 390607 391227 + RNA polymerase sigma factor%2C sigma-70 family identified by match to protein family HMM TIGR02937 gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0390 HMPREF9243_0391 HMPREF9243_0391 secE secE 391490 391654 + preprotein translocase%2C SecE subunit identified by match to protein family HMM PF00584%3B match to protein family HMM TIGR00964 gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0391 HMPREF9243_0392 HMPREF9243_0392 nusG nusG 391781 392341 + transcription termination/antitermination factor NusG identified by match to protein family HMM PF00467%3B match to protein family HMM PF02357%3B match to protein family HMM TIGR00922 gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0392 HMPREF9243_0393 HMPREF9243_0393 HMPREF9243_0393 392373 392651 + hypothetical protein gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0393 HMPREF9243_0394 HMPREF9243_0394 rplK rplK 392793 393218 + ribosomal protein L11 identified by match to protein family HMM PF00298%3B match to protein family HMM PF03946%3B match to protein family HMM TIGR01632 gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0394 HMPREF9243_0395 HMPREF9243_0395 rplA rplA 393326 394027 + ribosomal protein L1 identified by match to protein family HMM PF00687%3B match to protein family HMM TIGR01169 gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0395 HMPREF9243_0397 HMPREF9243_0397 rplJ rplJ 394681 395199 + ribosomal protein L10 identified by match to protein family HMM PF00466 gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0397 HMPREF9243_0398 HMPREF9243_0398 rplL rplL 395268 395639 + ribosomal protein L7/L12 identified by match to protein family HMM PF00542%3B match to protein family HMM TIGR00855 gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0398 HMPREF9243_0399 HMPREF9243_0399 HMPREF9243_0399 396144 397124 + transcriptional regulator%2C LacI family identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532 gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0399 HMPREF9243_0400 HMPREF9243_0400 HMPREF9243_0400 397339 398286 + kinase%2C PfkB family identified by match to protein family HMM PF00294 gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0400 HMPREF9243_0401 HMPREF9243_0401 HMPREF9243_0401 398302 399315 + putative 2-keto-3-deoxygluconate transporter identified by match to protein family HMM PF03812 gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0401 HMPREF9243_0402 HMPREF9243_0402 HMPREF9243_0402 399606 400208 + methyltransferase small domain protein identified by match to protein family HMM PF05175%3B match to protein family HMM PF08242 gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0402 HMPREF9243_0403 HMPREF9243_0403 HMPREF9243_0403 400357 400908 + transposase identified by match to protein family HMM PF01527 gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0403 HMPREF9243_0404 HMPREF9243_0404 HMPREF9243_0404 400908 401798 + integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0404 HMPREF9243_0405 HMPREF9243_0405 opuAA opuAA 402139 403356 + glycine betaine ABC transporter%2C ATP-binding protein OpuAA identified by match to protein family HMM PF00005%3B match to protein family HMM PF00571%3B match to protein family HMM TIGR01186 gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0405 HMPREF9243_0406 HMPREF9243_0406 opuAB opuAB 403349 404203 + glycine betaine transport system permease protein opuAB%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00528 pseudogene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0406 HMPREF9243_0407 HMPREF9243_0407 HMPREF9243_0407 404217 405095 + ABC transporter%2C substrate-binding protein%2C QAT family%3B this region contains one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF04069 pseudogene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0407 HMPREF9243_0408 HMPREF9243_0408 HMPREF9243_0408 405271 405714 + hypothetical protein gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0408 HMPREF9243_0409 HMPREF9243_0409 HMPREF9243_0409 405841 406104 + ACT domain protein identified by match to protein family HMM PF01842 gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0409 HMPREF9243_0410 HMPREF9243_0410 HMPREF9243_0410 406116 407474 + hypothetical protein identified by match to protein family HMM PF05167 gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0410 HMPREF9243_0411 HMPREF9243_0411 HMPREF9243_0411 407908 408642 + glycerophosphodiester phosphodiesterase family protein identified by match to protein family HMM PF03009 gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0411 HMPREF9243_0412 HMPREF9243_0412 msrA msrA 408890 409411 - peptide-methionine (S)-S-oxide reductase identified by match to protein family HMM PF01625%3B match to protein family HMM TIGR00401 gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0412 HMPREF9243_0413 HMPREF9243_0413 rpoB rpoB 409755 413357 + DNA-directed RNA polymerase%2C beta subunit identified by match to protein family HMM PF00562%3B match to protein family HMM PF04560%3B match to protein family HMM PF04561%3B match to protein family HMM PF04563%3B match to protein family HMM PF04565%3B match to protein family HMM TIGR02013 gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0413 HMPREF9243_0414 HMPREF9243_0414 rpoC rpoC 413662 417360 + DNA-directed RNA polymerase%2C beta' subunit identified by match to protein family HMM PF00623%3B match to protein family HMM PF04983%3B match to protein family HMM PF04997%3B match to protein family HMM PF04998%3B match to protein family HMM PF05000%3B match to protein family HMM TIGR02386 gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0414 HMPREF9243_0415 HMPREF9243_0415 HMPREF9243_0415 417656 420238 + ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent identified by match to protein family HMM PF02867%3B match to protein family HMM TIGR02504 gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0415 HMPREF9243_0416 HMPREF9243_0416 HMPREF9243_0416 420358 420951 + ATP:cob(I)alamin adenosyltransferase identified by match to protein family HMM PF01923%3B match to protein family HMM TIGR00636 gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0416 HMPREF9243_0417 HMPREF9243_0417 HMPREF9243_0417 421012 421725 - bacterial peptidase A24%2C N-terminal domain protein identified by match to protein family HMM PF01478%3B match to protein family HMM PF06750 gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0417 HMPREF9243_0418 HMPREF9243_0418 HMPREF9243_0418 421877 421949 + tRNA-Val tRNA gene414 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0418 HMPREF9243_0419 HMPREF9243_0419 HMPREF9243_0419 421954 422026 + tRNA-Lys tRNA gene415 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0419 HMPREF9243_0420 HMPREF9243_0420 HMPREF9243_0420 422061 422132 + tRNA-Gly tRNA gene416 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0420 HMPREF9243_0421 HMPREF9243_0421 HMPREF9243_0421 422162 422247 + tRNA-Leu tRNA gene417 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0421 HMPREF9243_0422 HMPREF9243_0422 HMPREF9243_0422 422266 422339 + tRNA-Arg tRNA gene418 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0422 HMPREF9243_0423 HMPREF9243_0423 HMPREF9243_0423 422344 422417 + tRNA-Pro tRNA gene419 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0423 HMPREF9243_0424 HMPREF9243_0424 HMPREF9243_0424 422474 422547 + tRNA-Pro tRNA gene420 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0424 HMPREF9243_0425 HMPREF9243_0425 HMPREF9243_0425 423058 423297 + toxin-antitoxin system%2C antitoxin component%2C Xre family gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0425 HMPREF9243_0426 HMPREF9243_0426 HMPREF9243_0426 423567 424271 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0426 HMPREF9243_0427 HMPREF9243_0427 HMPREF9243_0427 424264 425892 + hypothetical protein gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0427 HMPREF9243_0428 HMPREF9243_0428 HMPREF9243_0428 426094 427218 + cation diffusion facilitator family transporter identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297 gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0428 HMPREF9243_0429 HMPREF9243_0429 HMPREF9243_0429 427337 427795 + transcriptional repressor of CtsR identified by match to protein family HMM PF05848 gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0429 HMPREF9243_0430 HMPREF9243_0430 HMPREF9243_0430 427826 430345 + ATPase family associated with various cellular activities (AAA) identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728 gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0430 HMPREF9243_0431 HMPREF9243_0431 HMPREF9243_0431 430412 430624 + hypothetical protein gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0431 HMPREF9243_0432 HMPREF9243_0432 HMPREF9243_0432 430860 431804 + 2-dehydropantoate 2-reductase identified by match to protein family HMM PF02558%3B match to protein family HMM PF08546%3B match to protein family HMM TIGR00745 gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0432 HMPREF9243_0433 HMPREF9243_0433 HMPREF9243_0433 432145 432633 + cytidine and deoxycytidylate deaminase zinc-binding region identified by match to protein family HMM PF00383 gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0433 HMPREF9243_0434 HMPREF9243_0434 srpB srpB 432676 432774 + Bacterial signal recognition particle RNA gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0434 HMPREF9243_0435 HMPREF9243_0435 dnaX dnaX 432936 434861 + DNA polymerase III%2C subunit gamma and tau identified by match to protein family HMM PF00004%3B match to protein family HMM TIGR02397 gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0435 HMPREF9243_0436 HMPREF9243_0436 HMPREF9243_0436 434886 435200 + DNA-binding protein%2C YbaB/EbfC family identified by match to protein family HMM PF02575%3B match to protein family HMM TIGR00103 gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0436 HMPREF9243_0437 HMPREF9243_0437 recR recR 435283 435879 + recombination protein RecR identified by match to protein family HMM PF01751%3B match to protein family HMM PF02132%3B match to protein family HMM TIGR00615 gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0437 HMPREF9243_0438 HMPREF9243_0438 tmk tmk 435893 436573 + dTMP kinase identified by match to protein family HMM PF02223%3B match to protein family HMM TIGR00041 gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0438 HMPREF9243_0439 HMPREF9243_0439 holB holB 436551 437588 + DNA polymerase III%2C delta' subunit identified by match to protein family HMM TIGR00678 gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0439 HMPREF9243_0440 HMPREF9243_0440 HMPREF9243_0440 437870 438661 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0440 HMPREF9243_0441 HMPREF9243_0441 HMPREF9243_0441 438855 439220 + hypothetical protein identified by match to protein family HMM PF06156 gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0441 HMPREF9243_0442 HMPREF9243_0442 HMPREF9243_0442 439233 439976 + methyltransferase small domain protein identified by match to protein family HMM PF05175 gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0442 HMPREF9243_0443 HMPREF9243_0443 HMPREF9243_0443 439996 440316 + GIY-YIG catalytic domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01541 pseudogene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0443 HMPREF9243_0444 HMPREF9243_0444 HMPREF9243_0444 440321 441223 + S-adenosylmethionine-dependent methyltransferase%2C YraL family identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR00096 gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0444 HMPREF9243_0445 HMPREF9243_0445 HMPREF9243_0445 441220 442257 + hypothetical protein identified by match to protein family HMM PF02698 gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0445 HMPREF9243_0446 HMPREF9243_0446 mscL mscL 442287 442655 + large conductance mechanosensitive channel protein identified by match to protein family HMM PF01741%3B match to protein family HMM TIGR00220 gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0446 HMPREF9243_0447 HMPREF9243_0447 HMPREF9243_0447 442821 443921 - FAD dependent oxidoreductase identified by match to protein family HMM PF01266 gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0447 HMPREF9243_0448 HMPREF9243_0448 HMPREF9243_0448 443924 444946 - hypothetical protein gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0448 HMPREF9243_0449 HMPREF9243_0449 HMPREF9243_0449 445131 446282 + aromatic-amino-acid transaminase identified by match to protein family HMM PF00155 gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0449 HMPREF9243_0450 HMPREF9243_0450 HMPREF9243_0450 446378 447745 - HD domain protein identified by match to protein family HMM PF01966 gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0450 HMPREF9243_0451 HMPREF9243_0451 HMPREF9243_0451 447752 448021 - conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0451 HMPREF9243_0452 HMPREF9243_0452 HMPREF9243_0452 448018 448611 - conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0452 HMPREF9243_0453 HMPREF9243_0453 HMPREF9243_0453 448792 449232 + hypothetical protein identified by match to protein family HMM PF09148 gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0453 HMPREF9243_0454 HMPREF9243_0454 rpoE rpoE 449281 449922 + DNA-directed RNA polymerase%2C delta subunit identified by match to protein family HMM PF05066 gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0454 HMPREF9243_0455 HMPREF9243_0455 murA murA 450518 451783 + UDP-N-acetylglucosamine 1-carboxyvinyltransferase identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01072 gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0455 HMPREF9243_0456 HMPREF9243_0456 rho rho 451815 453179 + transcription termination factor Rho identified by match to protein family HMM PF00006%3B match to protein family HMM PF07497%3B match to protein family HMM PF07498%3B match to protein family HMM TIGR00767 gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0456 HMPREF9243_0457 HMPREF9243_0457 rpmE rpmE 453220 453486 + ribosomal protein L31 identified by match to protein family HMM PF01197%3B match to protein family HMM TIGR00105 gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0457 HMPREF9243_0458 HMPREF9243_0458 HMPREF9243_0458 453677 454384 + sortase family protein identified by match to protein family HMM PF04203 gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0458 HMPREF9243_0459 HMPREF9243_0459 HMPREF9243_0459 454824 455534 - hypothetical protein identified by glimmer%3B putative gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0459 HMPREF9243_0460 HMPREF9243_0460 HMPREF9243_0460 455599 456378 + hypothetical protein gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0460 HMPREF9243_0461 HMPREF9243_0461 HMPREF9243_0461 456381 457451 + D-ala D-ala ligase N-terminal domain protein identified by match to protein family HMM PF01820%3B match to protein family HMM PF02222%3B match to protein family HMM PF07478%3B match to protein family HMM PF08443%3B match to protein family HMM TIGR01205 gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0461 HMPREF9243_0462 HMPREF9243_0462 murF murF 457456 458844 + UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01143 gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0462 HMPREF9243_0463 HMPREF9243_0463 HMPREF9243_0463 458977 460503 + DEAD/DEAH box helicase identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271 gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0463 HMPREF9243_0464 HMPREF9243_0464 acpS acpS 460517 460873 + holo-[acyl-carrier-protein] synthase identified by match to protein family HMM PF01648%3B match to protein family HMM TIGR00516%3B match to protein family HMM TIGR00556 gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0464 HMPREF9243_0465 HMPREF9243_0465 HMPREF9243_0465 460996 461679 + hypothetical protein gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0465 HMPREF9243_0466 HMPREF9243_0466 HMPREF9243_0466 462133 463332 + transporter%2C major facilitator family protein identified by match to protein family HMM PF07690 gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0466 HMPREF9243_0468 HMPREF9243_0468 HMPREF9243_0468 463422 463925 + hypothetical protein identified by match to protein family HMM PF06177 gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0468 HMPREF9243_0469 HMPREF9243_0469 HMPREF9243_0469 464156 464926 + transcriptional regulator%2C MerR family identified by match to protein family HMM PF00376%3B match to protein family HMM PF09278 gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0469 HMPREF9243_0470 HMPREF9243_0470 HMPREF9243_0470 464919 465122 + hypothetical protein gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0470 HMPREF9243_0471 HMPREF9243_0471 HMPREF9243_0471 465122 466018 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0471 HMPREF9243_0472 HMPREF9243_0472 HMPREF9243_0472 466015 466785 + hypothetical protein gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0472 HMPREF9243_0473 HMPREF9243_0473 HMPREF9243_0473 467314 468639 + hypothetical protein identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471 gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0473 HMPREF9243_0474 HMPREF9243_0474 HMPREF9243_0474 468696 469067 - thioesterase family protein gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0474 HMPREF9243_0475 HMPREF9243_0475 rr1B rr1B 471265 474165 + 23S ribosomal RNA rRNA gene471 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0475 HMPREF9243_0476 HMPREF9243_0476 rrfB rrfB 474247 474362 + 5S ribosomal RNA rRNA gene472 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0476 HMPREF9243_0477 HMPREF9243_0477 HMPREF9243_0477 474638 475180 + 5' nucleotidase%2C deoxy (Pyrimidine)%2C cytosolic type C protein (NT5C) identified by match to protein family HMM PF06941 gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0477 HMPREF9243_0478 HMPREF9243_0478 HMPREF9243_0478 475204 476148 - glycosyltransferase%2C group 2 family protein identified by match to protein family HMM PF00535 gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0478 HMPREF9243_0479 HMPREF9243_0479 HMPREF9243_0479 476290 476655 + putative bacteriocin transport accessory protein gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0479 HMPREF9243_0480 HMPREF9243_0480 HMPREF9243_0480 476787 477233 + ribonuclease identified by match to protein family HMM PF00545 gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0480 HMPREF9243_0481 HMPREF9243_0481 HMPREF9243_0481 477245 477589 + hypothetical protein gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0481 HMPREF9243_0482 HMPREF9243_0482 HMPREF9243_0482 477604 478440 + hypothetical protein gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0482 HMPREF9243_0483 HMPREF9243_0483 HMPREF9243_0483 478462 480414 + hypothetical protein gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0483 HMPREF9243_0484 HMPREF9243_0484 uvrC uvrC 480490 482310 - excinuclease ABC%2C C subunit identified by match to protein family HMM PF01541%3B match to protein family HMM PF02151%3B match to protein family HMM PF08459%3B match to protein family HMM TIGR00194 gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0484 HMPREF9243_0485 HMPREF9243_0485 HMPREF9243_0485 482504 483616 + Ser/Thr phosphatase family protein identified by match to protein family HMM PF00149 gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0485 HMPREF9243_0486 HMPREF9243_0486 HMPREF9243_0486 483619 484932 + DEAD/DEAH box helicase identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271 gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0486 HMPREF9243_0487 HMPREF9243_0487 glmU glmU 484995 486380 + UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR01173 gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0487 HMPREF9243_0488 HMPREF9243_0488 prs prs 486460 487455 + ribose-phosphate diphosphokinase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01251 gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0488 HMPREF9243_0489 HMPREF9243_0489 pth pth 487661 488224 + aminoacyl-tRNA hydrolase identified by match to protein family HMM PF01195%3B match to protein family HMM TIGR00447 gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0489 HMPREF9243_0490 HMPREF9243_0490 mfd mfd 488240 491791 + transcription-repair coupling factor identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF02559%3B match to protein family HMM PF03461%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00580 gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0490 HMPREF9243_0491 HMPREF9243_0491 HMPREF9243_0491 491792 493417 + polysaccharide biosynthesis protein identified by match to protein family HMM PF01943 gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0491 HMPREF9243_0492 HMPREF9243_0492 HMPREF9243_0492 493427 493708 + S4 domain protein identified by match to protein family HMM PF01479 gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0492 HMPREF9243_0493 HMPREF9243_0493 HMPREF9243_0493 493785 494231 + putative cell division protein FtsL identified by match to protein family HMM PF04977 gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0493 HMPREF9243_0494 HMPREF9243_0494 HMPREF9243_0494 494256 494714 + S1 RNA binding domain protein identified by match to protein family HMM PF00575 gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0494 HMPREF9243_0495 HMPREF9243_0495 tilS tilS 494807 496225 + tRNA(Ile)-lysidine synthetase identified by match to protein family HMM PF01171%3B match to protein family HMM TIGR02432%3B match to protein family HMM TIGR02433 gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0495 HMPREF9243_0496 HMPREF9243_0496 hpt hpt 496331 496864 + hypoxanthine phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01203 gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0496 HMPREF9243_0497 HMPREF9243_0497 hflB hflB 496930 499080 + ATP-dependent metallopeptidase HflB identified by match to protein family HMM PF00004%3B match to protein family HMM PF01434%3B match to protein family HMM PF06480%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR01241 gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0497 HMPREF9243_0498 HMPREF9243_0498 hslO hslO 499214 500095 + chaperonin HslO identified by match to protein family HMM PF01430 gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0498 HMPREF9243_0499 HMPREF9243_0499 HMPREF9243_0499 500175 501032 + pyridoxal-phosphate dependent protein identified by match to protein family HMM PF00291 gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0499 HMPREF9243_0500 HMPREF9243_0500 HMPREF9243_0500 501454 502503 + TIM-barrel protein%2C nifR3 family identified by match to protein family HMM PF01207%3B match to protein family HMM TIGR00737 gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0500 HMPREF9243_0501 HMPREF9243_0501 lysS lysS 502593 504095 + lysine--tRNA ligase identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00499 gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0501 HMPREF9243_0502 HMPREF9243_0502 HMPREF9243_0502 504296 505987 + hypothetical protein gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0502 HMPREF9243_0503 HMPREF9243_0503 rpsL rpsL 506288 506701 + ribosomal protein S12 identified by match to protein family HMM PF00164%3B match to protein family HMM TIGR00981 gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0503 HMPREF9243_0504 HMPREF9243_0504 rpsG rpsG 506728 507198 + ribosomal protein S7 identified by match to protein family HMM PF00177%3B match to protein family HMM TIGR01029 gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0504 HMPREF9243_0505 HMPREF9243_0505 fusA fusA 507301 509394 + translation elongation factor G identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00484 gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0505 HMPREF9243_0506 HMPREF9243_0506 tuf tuf 509531 510715 + translation elongation factor Tu identified by match to protein family HMM PF00009%3B match to protein family HMM PF03143%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00485 gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0506 HMPREF9243_0507 HMPREF9243_0507 HMPREF9243_0507 510892 512307 + hypothetical protein gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0507 HMPREF9243_0508 HMPREF9243_0508 rpsJ rpsJ 512740 513048 + ribosomal protein S10 identified by match to protein family HMM PF00338%3B match to protein family HMM TIGR01049 gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0508 HMPREF9243_0509 HMPREF9243_0509 rplC rplC 513093 513728 + 50S ribosomal protein L3 identified by match to protein family HMM PF00297%3B match to protein family HMM TIGR03625 gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0509 HMPREF9243_0510 HMPREF9243_0510 rplD rplD 513751 514374 + 50S ribosomal protein L4 identified by match to protein family HMM PF00573%3B match to protein family HMM TIGR03953 gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0510 HMPREF9243_0511 HMPREF9243_0511 rplW rplW 514374 514676 + ribosomal protein L23 identified by match to protein family HMM PF00276 gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0511 HMPREF9243_0512 HMPREF9243_0512 rplB rplB 514688 515524 + ribosomal protein L2 identified by match to protein family HMM PF00181%3B match to protein family HMM PF03947%3B match to protein family HMM TIGR01171 gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0512 HMPREF9243_0513 HMPREF9243_0513 rpsS rpsS 515559 515837 + ribosomal protein S19 identified by match to protein family HMM PF00203%3B match to protein family HMM TIGR01050 gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0513 HMPREF9243_0514 HMPREF9243_0514 rplV rplV 515860 516216 + ribosomal protein L22 identified by match to protein family HMM PF00237%3B match to protein family HMM TIGR01044 gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0514 HMPREF9243_0515 HMPREF9243_0515 rpsC rpsC 516220 516870 + ribosomal protein S3 identified by match to protein family HMM PF00189%3B match to protein family HMM PF00417%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR01009 gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0515 HMPREF9243_0516 HMPREF9243_0516 rplP rplP 516873 517301 + ribosomal protein L16 identified by match to protein family HMM PF00252%3B match to protein family HMM TIGR01164 gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0516 HMPREF9243_0517 HMPREF9243_0517 rpmC rpmC 517294 517488 + ribosomal protein L29 identified by match to protein family HMM PF00831%3B match to protein family HMM TIGR00012 gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0517 HMPREF9243_0518 HMPREF9243_0518 rpsQ rpsQ 517521 517787 + 30S ribosomal protein S17 identified by match to protein family HMM PF00366%3B match to protein family HMM TIGR03635 gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0518 HMPREF9243_0519 HMPREF9243_0519 rplN rplN 517815 518183 + ribosomal protein L14 identified by match to protein family HMM PF00238%3B match to protein family HMM TIGR01067 gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0519 HMPREF9243_0520 HMPREF9243_0520 rplX rplX 518211 518519 + ribosomal protein L24 identified by match to protein family HMM PF00467%3B match to protein family HMM TIGR01079 gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0520 HMPREF9243_0521 HMPREF9243_0521 rplE rplE 518545 519087 + ribosomal protein L5 identified by match to protein family HMM PF00281%3B match to protein family HMM PF00673 gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0521 HMPREF9243_0522 HMPREF9243_0522 rpsH rpsH 519321 519719 + ribosomal protein S8 identified by match to protein family HMM PF00410 gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0522 HMPREF9243_0523 HMPREF9243_0523 rplF rplF 519754 520293 + ribosomal protein L6 identified by match to protein family HMM PF00347%3B match to protein family HMM TIGR03654 gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0523 HMPREF9243_0524 HMPREF9243_0524 rplR rplR 520336 520701 + ribosomal protein L18 identified by match to protein family HMM PF00861%3B match to protein family HMM TIGR00060 gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0524 HMPREF9243_0525 HMPREF9243_0525 rpsE rpsE 520722 521228 + ribosomal protein S5 identified by match to protein family HMM PF00333%3B match to protein family HMM PF03719%3B match to protein family HMM TIGR01021 gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0525 HMPREF9243_0526 HMPREF9243_0526 rpmD rpmD 521240 521422 + ribosomal protein L30 identified by match to protein family HMM PF00327%3B match to protein family HMM TIGR01308 gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0526 HMPREF9243_0527 HMPREF9243_0527 rplO rplO 521446 521886 + ribosomal protein L15 identified by match to protein family HMM PF00256%3B match to protein family HMM PF01305%3B match to protein family HMM TIGR01071 gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0527 HMPREF9243_0528 HMPREF9243_0528 secY secY 521886 523184 + preprotein translocase%2C SecY subunit identified by match to protein family HMM PF00344%3B match to protein family HMM TIGR00967 gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0528 HMPREF9243_0529 HMPREF9243_0529 HMPREF9243_0529 523205 523858 + adenylate kinase identified by match to protein family HMM PF00406%3B match to protein family HMM PF05191%3B match to protein family HMM TIGR01351 gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0529 HMPREF9243_0530 HMPREF9243_0530 infA infA 523958 524176 + translation initiation factor IF-1 identified by match to protein family HMM PF00575%3B match to protein family HMM PF01176%3B match to protein family HMM TIGR00008 gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0530 HMPREF9243_0531 HMPREF9243_0531 rpsM rpsM 524339 524704 + 30S ribosomal protein S13 identified by match to protein family HMM PF00416%3B match to protein family HMM TIGR03631 gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0531 HMPREF9243_0532 HMPREF9243_0532 rpsK rpsK 524736 525131 + 30S ribosomal protein S11 identified by match to protein family HMM PF00411%3B match to protein family HMM TIGR03632 gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0532 HMPREF9243_0533 HMPREF9243_0533 rpoA rpoA 525208 526152 + DNA-directed RNA polymerase%2C alpha subunit identified by match to protein family HMM PF01000%3B match to protein family HMM PF01193%3B match to protein family HMM PF03118%3B match to protein family HMM TIGR02027 gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0533 HMPREF9243_0534 HMPREF9243_0534 rplQ rplQ 526180 526560 + ribosomal protein L17 identified by match to protein family HMM PF01196%3B match to protein family HMM TIGR00059 gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0534 HMPREF9243_0535 HMPREF9243_0535 HMPREF9243_0535 526770 528653 + acyltransferase identified by match to protein family HMM PF01757 gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0535 HMPREF9243_0537 HMPREF9243_0537 HMPREF9243_0537 528896 529735 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF02463 gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0537 HMPREF9243_0538 HMPREF9243_0538 HMPREF9243_0538 529711 530589 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0538 HMPREF9243_0539 HMPREF9243_0539 HMPREF9243_0539 530579 531373 + cobalt transport protein identified by match to protein family HMM PF02361 gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0539 HMPREF9243_0540 HMPREF9243_0540 truA truA 531476 532270 + tRNA pseudouridine synthase A identified by match to protein family HMM PF01416%3B match to protein family HMM TIGR00071 gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0540 HMPREF9243_0541 HMPREF9243_0541 HMPREF9243_0541 532370 532561 + hypothetical protein identified by glimmer%3B putative gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0541 HMPREF9243_0542 HMPREF9243_0542 HMPREF9243_0542 532645 533604 + putative beta-lactamase identified by match to protein family HMM PF00144 gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0542 HMPREF9243_0543 HMPREF9243_0543 HMPREF9243_0543 533665 533826 + hypothetical protein identified by glimmer%3B putative gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0543 HMPREF9243_0545 HMPREF9243_0545 rplM rplM 533966 534409 + ribosomal protein L13 identified by match to protein family HMM PF00572%3B match to protein family HMM TIGR01066 gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0545 HMPREF9243_0546 HMPREF9243_0546 rpsI rpsI 534423 534815 + ribosomal protein S9 identified by match to protein family HMM PF00380 gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0546 HMPREF9243_0547 HMPREF9243_0547 HMPREF9243_0547 535076 537583 + SCP-like protein identified by match to protein family HMM PF00188%3B match to protein family HMM PF01476%3B match to protein family HMM PF07501 gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0547 HMPREF9243_0548 HMPREF9243_0548 HMPREF9243_0548 538714 540039 - transposase identified by match to protein family HMM PF01610 gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0548 HMPREF9243_0549 HMPREF9243_0549 HMPREF9243_0549 540478 542379 + Gram-positive signal peptide protein%2C YSIRK family identified by match to protein family HMM PF04650%3B match to protein family HMM TIGR01168 gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0549 HMPREF9243_0550 HMPREF9243_0550 HMPREF9243_0550 542517 544811 + LPXTG-motif cell wall anchor domain protein gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0550 HMPREF9243_0551 HMPREF9243_0551 HMPREF9243_0551 545113 545721 + Gram-positive signal peptide protein%2C YSIRK family identified by match to protein family HMM PF04650%3B match to protein family HMM TIGR01168 gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0551 HMPREF9243_0552 HMPREF9243_0552 HMPREF9243_0552 545681 551701 + putative C protein alpha-antigen%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF08428 pseudogene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0552 HMPREF9243_0553 HMPREF9243_0553 HMPREF9243_0553 551899 553041 - transporter%2C major facilitator family protein identified by match to protein family HMM PF07690 gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0553 HMPREF9243_0554 HMPREF9243_0554 HMPREF9243_0554 553348 554538 + oxidoreductase%2C FAD/FMN-binding protein identified by match to protein family HMM PF00724 gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0554 HMPREF9243_0555 HMPREF9243_0555 HMPREF9243_0555 554627 555556 + diacylglycerol kinase catalytic domain protein identified by match to protein family HMM PF00781 gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0555 HMPREF9243_0556 HMPREF9243_0556 nth nth 555678 556340 - endonuclease III identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01083 gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0556 HMPREF9243_0557 HMPREF9243_0557 HMPREF9243_0557 556516 558387 - flavocytochrome c identified by match to protein family HMM PF00890%3B match to protein family HMM PF01266%3B match to protein family HMM PF04205%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01813 gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0557 HMPREF9243_0558 HMPREF9243_0558 HMPREF9243_0558 558670 560211 + putative toxin-antitoxin system toxin component%2C PIN family identified by match to protein family HMM PF00528%3B match to protein family HMM PF04069 gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0558 HMPREF9243_0559 HMPREF9243_0559 HMPREF9243_0559 560211 561179 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0559 HMPREF9243_0560 HMPREF9243_0560 HMPREF9243_0560 561309 562316 + putative alanine dehydrogenase identified by match to protein family HMM PF02423 gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0560 HMPREF9243_0561 HMPREF9243_0561 HMPREF9243_0561 562403 563002 - hypothetical protein identified by match to protein family HMM PF02586 gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0561 HMPREF9243_0562 HMPREF9243_0562 HMPREF9243_0562 563164 563928 + nitroreductase family protein identified by match to protein family HMM PF00881 gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0562 HMPREF9243_0563 HMPREF9243_0563 HMPREF9243_0563 564237 564941 - RNA pseudouridine synthase identified by match to protein family HMM PF00849 gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0563 HMPREF9243_0564 HMPREF9243_0564 HMPREF9243_0564 565103 566023 + L-2-hydroxyisocaproate dehydrogenase identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866 gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0564 HMPREF9243_0565 HMPREF9243_0565 HMPREF9243_0565 566277 566405 + hypothetical protein identified by glimmer%3B putative gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0565 HMPREF9243_0566 HMPREF9243_0566 phnD phnD 566546 567466 + phosphate/phosphite/phosphonate ABC transporter%2C periplasmic binding protein identified by match to protein family HMM TIGR01098 gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0566 HMPREF9243_0567 HMPREF9243_0567 phnC_1 phnC_1 567528 568226 + phosphonate ABC transporter%2C ATP-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR02315 pseudogene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0567 HMPREF9243_0568 HMPREF9243_0568 phnE phnE 568427 569071 + phosphonate ABC transporter%2C permease protein PhnE identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01097 gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0568 HMPREF9243_0569 HMPREF9243_0569 phnE phnE 569075 569851 + phosphonate ABC transporter%2C permease protein PhnE identified by match to protein family HMM PF00528 gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0569 HMPREF9243_0570 HMPREF9243_0570 HMPREF9243_0570 569866 570660 + Ser/Thr phosphatase family protein identified by match to protein family HMM PF00149 gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0570 HMPREF9243_0571 HMPREF9243_0571 HMPREF9243_0571 570878 571879 + quinone oxidoreductase%2C YhdH/YhfP family identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240%3B match to protein family HMM TIGR02823 gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0571 HMPREF9243_0572 HMPREF9243_0572 HMPREF9243_0572 571985 573241 + amidohydrolase family protein identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969 gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0572 HMPREF9243_0573 HMPREF9243_0573 HMPREF9243_0573 573302 574525 - oxidoreductase%2C FAD/FMN-binding protein identified by match to protein family HMM PF00724 gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0573 HMPREF9243_0574 HMPREF9243_0574 HMPREF9243_0574 574679 575680 + luciferase family oxidoreductase%2C FMN-dependent%2C PP_0088 family identified by match to protein family HMM PF00296%3B match to protein family HMM TIGR03558 gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0574 HMPREF9243_0575 HMPREF9243_0575 HMPREF9243_0575 575854 577131 + conserved TM helix identified by match to protein family HMM PF05552 gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0575 HMPREF9243_0576 HMPREF9243_0576 HMPREF9243_0576 577371 577703 + glycine cleavage H-protein identified by match to protein family HMM PF01597 gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0576 HMPREF9243_0577 HMPREF9243_0577 HMPREF9243_0577 577775 578587 + macro domain protein identified by match to protein family HMM PF01661 gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0577 HMPREF9243_0578 HMPREF9243_0578 HMPREF9243_0578 578588 579460 + hypothetical protein gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0578 HMPREF9243_0579 HMPREF9243_0579 HMPREF9243_0579 579479 580507 + lipoyltransferase and lipoate-protein ligase identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00545 gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0579 HMPREF9243_0580 HMPREF9243_0580 HMPREF9243_0580 580577 581110 - TIGR00730 family protein identified by match to protein family HMM PF03641%3B match to protein family HMM TIGR00730 gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0580 HMPREF9243_0581 HMPREF9243_0581 HMPREF9243_0581 581360 582355 + D-lactate dehydrogenase identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826 gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0581 HMPREF9243_0582 HMPREF9243_0582 HMPREF9243_0582 582461 583342 - LysM domain protein identified by match to protein family HMM PF01476 gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0582 HMPREF9243_0583 HMPREF9243_0583 galE galE 583825 584838 - UDP-glucose 4-epimerase identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01179 gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0583 HMPREF9243_0584 HMPREF9243_0584 HMPREF9243_0584 584999 586291 - putative permease identified by match to protein family HMM PF00860%3B match to protein family HMM TIGR00801 gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0584 HMPREF9243_0585 HMPREF9243_0585 HMPREF9243_0585 586513 586860 + DNA-binding helix-turn-helix protein identified by match to protein family HMM PF01381 gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0585 HMPREF9243_0586 HMPREF9243_0586 HMPREF9243_0586 587120 587377 + DNA-binding helix-turn-helix protein identified by match to protein family HMM PF01381 gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0586 HMPREF9243_0587 HMPREF9243_0587 HMPREF9243_0587 587745 588602 + hypothetical protein identified by glimmer%3B putative gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0587 HMPREF9243_0588 HMPREF9243_0588 recX recX 588652 589668 + regulatory protein RecX identified by match to protein family HMM PF02631 gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0588 HMPREF9243_0589 HMPREF9243_0589 mutY mutY 589665 590879 + A/G-specific adenine glycosylase identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01084 gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0589 HMPREF9243_0590 HMPREF9243_0590 HMPREF9243_0590 591117 591725 - hypothetical protein identified by match to protein family HMM PF04167 gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0590 HMPREF9243_0591 HMPREF9243_0591 HMPREF9243_0591 591854 593068 + hypothetical protein gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0591 HMPREF9243_0592 HMPREF9243_0592 pulA pulA 593255 595255 + pullulanase%2C type I identified by match to protein family HMM PF00128%3B match to protein family HMM PF02922%3B match to protein family HMM TIGR02104 gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0592 HMPREF9243_0593 HMPREF9243_0593 HMPREF9243_0593 595330 596445 - hypothetical protein gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0593 HMPREF9243_0594 HMPREF9243_0594 perR perR 596727 597083 + peroxide-responsive repressor PerR%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01475 pseudogene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0594 HMPREF9243_0595 HMPREF9243_0595 proC proC 597202 597999 - pyrroline-5-carboxylate reductase identified by match to protein family HMM PF01210%3B match to protein family HMM PF02558%3B match to protein family HMM PF03446%3B match to protein family HMM PF03807%3B match to protein family HMM TIGR00112 gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0595 HMPREF9243_0596 HMPREF9243_0596 HMPREF9243_0596 598063 598884 + hypothetical protein identified by glimmer%3B putative gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0596 HMPREF9243_0597 HMPREF9243_0597 rr1C rr1C 601137 604037 + 23S ribosomal RNA rRNA gene593 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0597 HMPREF9243_0598 HMPREF9243_0598 rrfC rrfC 604119 604234 + 5S ribosomal RNA rRNA gene594 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0598 HMPREF9243_0599 HMPREF9243_0599 HMPREF9243_0599 604248 604321 + tRNA-Asn tRNA gene595 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0599 HMPREF9243_0600 HMPREF9243_0600 HMPREF9243_0600 604356 604442 + tRNA-Ser tRNA gene596 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0600 HMPREF9243_0601 HMPREF9243_0601 HMPREF9243_0601 604456 604527 + tRNA-Glu tRNA gene597 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0601 HMPREF9243_0602 HMPREF9243_0602 HMPREF9243_0602 604549 604621 + tRNA-Val tRNA gene598 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0602 HMPREF9243_0603 HMPREF9243_0603 HMPREF9243_0603 604636 604708 + tRNA-Asp tRNA gene599 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0603 HMPREF9243_0604 HMPREF9243_0604 HMPREF9243_0604 604721 604793 + tRNA-Phe tRNA gene600 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0604 HMPREF9243_0605 HMPREF9243_0605 HMPREF9243_0605 604801 604881 + tRNA-Tyr tRNA gene601 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0605 HMPREF9243_0606 HMPREF9243_0606 HMPREF9243_0606 604911 604981 + tRNA-Trp tRNA gene602 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0606 HMPREF9243_0607 HMPREF9243_0607 HMPREF9243_0607 605009 605081 + tRNA-His tRNA gene603 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0607 HMPREF9243_0608 HMPREF9243_0608 HMPREF9243_0608 605089 605160 + tRNA-Gln tRNA gene604 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0608 HMPREF9243_0609 HMPREF9243_0609 HMPREF9243_0609 605235 605305 + tRNA-Cys tRNA gene605 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0609 HMPREF9243_0610 HMPREF9243_0610 HMPREF9243_0610 605317 605400 + tRNA-Leu tRNA gene606 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0610 HMPREF9243_0611 HMPREF9243_0611 HMPREF9243_0611 605498 606238 - site-specific recombinase%2C phage integrase family identified by match to protein family HMM PF00589 gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0611 HMPREF9243_0612 HMPREF9243_0612 HMPREF9243_0612 606708 607328 - hypothetical protein gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0612 HMPREF9243_0613 HMPREF9243_0613 HMPREF9243_0613 607798 608145 - DNA-binding helix-turn-helix protein identified by match to protein family HMM PF01381 gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0613 HMPREF9243_0614 HMPREF9243_0614 HMPREF9243_0614 608168 608332 - hypothetical protein identified by glimmer%3B putative gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0614 HMPREF9243_0615 HMPREF9243_0615 HMPREF9243_0615 608892 609458 - chromate transport protein identified by match to protein family HMM PF02417 gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0615 HMPREF9243_0616 HMPREF9243_0616 HMPREF9243_0616 609461 610048 - chromate transport protein identified by match to protein family HMM PF02417 gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0616 HMPREF9243_0617 HMPREF9243_0617 HMPREF9243_0617 610206 611534 + FMN-binding domain protein identified by match to protein family HMM PF04205 gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0617 HMPREF9243_0618 HMPREF9243_0618 HMPREF9243_0618 611630 612181 + transposase identified by match to protein family HMM PF01527 gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0618 HMPREF9243_0619 HMPREF9243_0619 HMPREF9243_0619 612181 613071 + integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0619 HMPREF9243_0620 HMPREF9243_0620 HMPREF9243_0620 613266 615053 - hypothetical protein gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0620 HMPREF9243_0621 HMPREF9243_0621 HMPREF9243_0621 615207 615779 + hypothetical protein identified by match to protein family HMM PF02698 gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0621 HMPREF9243_0622 HMPREF9243_0622 HMPREF9243_0622 615836 615949 - hypothetical protein identified by glimmer%3B putative gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0622 HMPREF9243_0623 HMPREF9243_0623 HMPREF9243_0623 616275 617057 + Ser/Thr phosphatase family protein identified by match to protein family HMM PF00149 gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0623 HMPREF9243_0624 HMPREF9243_0624 HMPREF9243_0624 617094 618386 + ABC transporter%2C solute-binding protein identified by match to protein family HMM PF01547 gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0624 HMPREF9243_0625 HMPREF9243_0625 HMPREF9243_0625 618417 619292 + ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0625 HMPREF9243_0626 HMPREF9243_0626 HMPREF9243_0626 619282 620115 + ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0626 HMPREF9243_0627 HMPREF9243_0627 HMPREF9243_0627 620148 621296 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402 gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0627 HMPREF9243_0628 HMPREF9243_0628 HMPREF9243_0628 621350 622657 + ABC transporter%2C solute-binding protein identified by match to protein family HMM PF01547 gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0628 HMPREF9243_0629 HMPREF9243_0629 HMPREF9243_0629 622727 623533 + hypothetical protein gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0629 HMPREF9243_0630 HMPREF9243_0630 HMPREF9243_0630 623547 624206 + hypothetical protein gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0630 HMPREF9243_0631 HMPREF9243_0631 HMPREF9243_0631 624208 625170 + Inosine-uridine preferring nucleoside hydrolase identified by match to protein family HMM PF01156 gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0631 HMPREF9243_0632 HMPREF9243_0632 HMPREF9243_0632 625668 626156 + Gram-positive signal peptide protein%2C YSIRK family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF04650%3B match to protein family HMM TIGR01168 pseudogene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0632 HMPREF9243_0633 HMPREF9243_0633 HMPREF9243_0633 626288 636124 + LPXTG-motif cell wall anchor domain protein identified by match to protein family HMM PF00746%3B match to protein family HMM PF01391%3B match to protein family HMM TIGR01167 gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0633 HMPREF9243_0634 HMPREF9243_0634 HMPREF9243_0634 636312 636785 - hypothetical protein gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0634 HMPREF9243_0635 HMPREF9243_0635 HMPREF9243_0635 637008 637775 + hypothetical protein gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0635 HMPREF9243_0636 HMPREF9243_0636 HMPREF9243_0636 637829 638809 - transcriptional regulator%2C LacI family identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532 gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0636 HMPREF9243_0637 HMPREF9243_0637 HMPREF9243_0637 638823 640316 - sucrose-6-phosphate hydrolase identified by match to protein family HMM PF00251%3B match to protein family HMM PF08244%3B match to protein family HMM TIGR01322 gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0637 HMPREF9243_0638 HMPREF9243_0638 HMPREF9243_0638 640539 642497 + PTS system sucrose-specific IIBC component identified by match to protein family HMM PF00358%3B match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR00830%3B match to protein family HMM TIGR01996 gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0638 HMPREF9243_0639 HMPREF9243_0639 HMPREF9243_0639 642693 643436 + hypothetical protein gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0639 HMPREF9243_0640 HMPREF9243_0640 pdxB pdxB 643472 644431 + 4-phosphoerythronate dehydrogenase identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826%3B match to protein family HMM PF03446%3B match to protein family HMM PF07991 gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0640 HMPREF9243_0641 HMPREF9243_0641 xpt xpt 644662 645243 - xanthine phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01744 gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0641 HMPREF9243_0642 HMPREF9243_0642 HMPREF9243_0642 645433 645969 + RNA methyltransferase%2C TrmH family%2C group 2 identified by match to protein family HMM PF00588%3B match to protein family HMM TIGR00185 gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0642 HMPREF9243_0643 HMPREF9243_0643 HMPREF9243_0643 646061 648142 + penicillin-binding protein%2C 1A family identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074 gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0643 HMPREF9243_0644 HMPREF9243_0644 HMPREF9243_0644 648241 648627 + hypothetical protein identified by match to protein family HMM PF06133 gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0644 HMPREF9243_0645 HMPREF9243_0645 HMPREF9243_0645 648875 650044 + Ser/Thr phosphatase family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00149 pseudogene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0645 HMPREF9243_0646 HMPREF9243_0646 HMPREF9243_0646 650069 652834 + RecF/RecN/SMC N-terminal domain protein identified by match to protein family HMM PF02463 gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0646 HMPREF9243_0647 HMPREF9243_0647 HMPREF9243_0647 652855 653820 + HD domain protein identified by match to protein family HMM PF01336%3B match to protein family HMM PF01966 gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0647 HMPREF9243_0648 HMPREF9243_0648 HMPREF9243_0648 654166 654990 + glycosyltransferase%2C family 8 identified by match to protein family HMM PF01501 gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0648 HMPREF9243_0649 HMPREF9243_0649 prsA prsA 655047 656069 - peptidylprolyl isomerase identified by match to protein family HMM PF00639 gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0649 HMPREF9243_0650 HMPREF9243_0650 HMPREF9243_0650 656205 656591 - hypothetical protein gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0650 HMPREF9243_0651 HMPREF9243_0651 HMPREF9243_0651 656595 657023 - histidine triad domain protein identified by match to protein family HMM PF01230 gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0651 HMPREF9243_0652 HMPREF9243_0652 HMPREF9243_0652 657208 657948 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0652 HMPREF9243_0653 HMPREF9243_0653 HMPREF9243_0653 657938 659173 + bacterial ABC transporter protein EcsB identified by match to protein family HMM PF05975 gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0653 HMPREF9243_0654 HMPREF9243_0654 HMPREF9243_0654 659251 660084 + phosphotransferase enzyme family identified by match to protein family HMM PF01636 gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0654 HMPREF9243_0655 HMPREF9243_0655 trmB trmB 660197 660844 + tRNA (guanine-N(7)-)-methyltransferase identified by match to protein family HMM PF02390%3B match to protein family HMM TIGR00091 gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0655 HMPREF9243_0656 HMPREF9243_0656 HMPREF9243_0656 660936 661322 - hypothetical protein gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0656 HMPREF9243_0657 HMPREF9243_0657 HMPREF9243_0657 661643 662176 + tRNA binding domain protein identified by match to protein family HMM PF01588 gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0657 HMPREF9243_0658 HMPREF9243_0658 HMPREF9243_0658 662231 662947 + hypothetical protein gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0658 HMPREF9243_0659 HMPREF9243_0659 murC murC 662951 664309 + UDP-N-acetylmuramate--L-alanine ligase identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01082 gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0659 HMPREF9243_0660 HMPREF9243_0660 HMPREF9243_0660 664299 665186 + nucleotidyl transferase identified by match to protein family HMM PF00483 gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0660 HMPREF9243_0661 HMPREF9243_0661 HMPREF9243_0661 665247 666248 + hypothetical protein gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0661 HMPREF9243_0662 HMPREF9243_0662 folC folC 666655 667956 + bifunctional protein FolC identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01499 gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0662 HMPREF9243_0663 HMPREF9243_0663 HMPREF9243_0663 668030 668716 - phosphoglycerate mutase family protein identified by match to protein family HMM PF00300 gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0663 HMPREF9243_0665 HMPREF9243_0665 leuS leuS 669108 671522 + leucine--tRNA ligase identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00396 gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0665 HMPREF9243_0666 HMPREF9243_0666 HMPREF9243_0666 671535 672398 + pyridoxal kinase identified by match to protein family HMM PF08543 gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0666 HMPREF9243_0667 HMPREF9243_0667 HMPREF9243_0667 672559 673323 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0667 HMPREF9243_0668 HMPREF9243_0668 HMPREF9243_0668 673323 674144 + ABC transporter%2C substrate-binding protein%2C family 3 identified by match to protein family HMM PF00497 gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0668 HMPREF9243_0669 HMPREF9243_0669 HMPREF9243_0669 674212 674901 + ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726 gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0669 HMPREF9243_0670 HMPREF9243_0670 HMPREF9243_0670 674905 675606 + ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0670 HMPREF9243_0671 HMPREF9243_0671 HMPREF9243_0671 675640 676593 + hypothetical protein gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0671 HMPREF9243_0672 HMPREF9243_0672 HMPREF9243_0672 676729 678441 + polysaccharide biosynthesis protein identified by match to protein family HMM PF01943%3B match to protein family HMM PF03023 gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0672 HMPREF9243_0673 HMPREF9243_0673 malQ malQ 678639 679487 - 4-alpha-glucanotransferase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02446 pseudogene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0673 HMPREF9243_0674 HMPREF9243_0674 HMPREF9243_0674 679541 680140 - putative 4-alpha-glucanotransferase%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0674 HMPREF9243_0675 HMPREF9243_0675 HMPREF9243_0675 680381 681772 + dipeptidase PepV identified by match to protein family HMM PF01546%3B match to protein family HMM TIGR01887 gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0675 HMPREF9243_0676 HMPREF9243_0676 HMPREF9243_0676 681774 682553 + RNA methyltransferase%2C TrmH family identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032 gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0676 HMPREF9243_0677 HMPREF9243_0677 HMPREF9243_0677 682550 683167 + HDIG domain protein gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0677 HMPREF9243_0678 HMPREF9243_0678 HMPREF9243_0678 683194 683526 + transcriptional regulator%2C HxlR family identified by match to protein family HMM PF01638 gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0678 HMPREF9243_0680 HMPREF9243_0680 pheS pheS 684371 685420 + phenylalanine--tRNA ligase%2C alpha subunit identified by match to protein family HMM PF01409%3B match to protein family HMM PF02912%3B match to protein family HMM TIGR00468 gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0680 HMPREF9243_0681 HMPREF9243_0681 pheT pheT 685420 687870 + phenylalanine--tRNA ligase%2C beta subunit identified by match to protein family HMM PF01588%3B match to protein family HMM PF03147%3B match to protein family HMM PF03483%3B match to protein family HMM PF03484%3B match to protein family HMM TIGR00472 gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0681 HMPREF9243_0682 HMPREF9243_0682 agcS agcS 688101 689516 + amino acid carrier protein identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835 gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0682 HMPREF9243_0683 HMPREF9243_0683 pta pta 689696 690694 + phosphate acetyltransferase identified by match to protein family HMM PF01515%3B match to protein family HMM TIGR00651 gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0683 HMPREF9243_0684 HMPREF9243_0684 HMPREF9243_0684 690831 691424 + hypothetical protein gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0684 HMPREF9243_0685 HMPREF9243_0685 HMPREF9243_0685 691592 692047 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0685 HMPREF9243_0686 HMPREF9243_0686 HMPREF9243_0686 692050 692163 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0686 HMPREF9243_0687 HMPREF9243_0687 HMPREF9243_0687 692290 693852 + putative exopolyphosphatase identified by match to protein family HMM PF02541 gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0687 HMPREF9243_0688 HMPREF9243_0688 ppk1 ppk1 694001 696196 + polyphosphate kinase 1 identified by match to protein family HMM PF02503%3B match to protein family HMM TIGR03705 gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0688 HMPREF9243_0689 HMPREF9243_0689 HMPREF9243_0689 696294 696839 - TIGR01440 family protein identified by match to protein family HMM PF04260%3B match to protein family HMM TIGR01440 gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0689 HMPREF9243_0690 HMPREF9243_0690 HMPREF9243_0690 697036 697503 + hydrolase%2C P-loop family identified by match to protein family HMM PF02367%3B match to protein family HMM TIGR00150 gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0690 HMPREF9243_0691 HMPREF9243_0691 HMPREF9243_0691 697506 698075 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0691 HMPREF9243_0692 HMPREF9243_0692 HMPREF9243_0692 698321 698560 - hypothetical protein identified by glimmer%3B putative gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0692 HMPREF9243_0693 HMPREF9243_0693 murB murB 698731 699636 + UDP-N-acetylmuramate dehydrogenase identified by match to protein family HMM PF01565%3B match to protein family HMM PF02873%3B match to protein family HMM TIGR00179 gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0693 HMPREF9243_0694 HMPREF9243_0694 HMPREF9243_0694 699910 701580 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0694 HMPREF9243_0695 HMPREF9243_0695 HMPREF9243_0695 701677 702258 - phosphoglycerate mutase family protein identified by match to protein family HMM PF00300 gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0695 HMPREF9243_0696 HMPREF9243_0696 HMPREF9243_0696 702607 703623 + hypothetical protein gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0696 HMPREF9243_0697 HMPREF9243_0697 HMPREF9243_0697 703945 704997 + ABC transporter substrate binding protein identified by match to protein family HMM PF04392 gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0697 HMPREF9243_0698 HMPREF9243_0698 HMPREF9243_0698 705000 705899 + branched-chain amino acid ABC transporter%2C permease protein identified by match to protein family HMM PF02653 gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0698 HMPREF9243_0699 HMPREF9243_0699 HMPREF9243_0699 705902 706669 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0699 HMPREF9243_0700 HMPREF9243_0700 HMPREF9243_0700 706747 709155 - transglycosylase identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912 gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0700 HMPREF9243_0701 HMPREF9243_0701 HMPREF9243_0701 709430 710161 + DNA-binding regulatory protein%2C YebC/PmpR family identified by match to protein family HMM PF01709%3B match to protein family HMM TIGR01033 gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0701 HMPREF9243_0702 HMPREF9243_0702 HMPREF9243_0702 710355 711689 + peptidase C1-like family identified by match to protein family HMM PF03051 gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0702 HMPREF9243_0703 HMPREF9243_0703 HMPREF9243_0703 711955 713022 + efflux ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0703 HMPREF9243_0704 HMPREF9243_0704 HMPREF9243_0704 713051 713719 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0704 HMPREF9243_0705 HMPREF9243_0705 HMPREF9243_0705 714091 715191 - hypothetical protein gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0705 HMPREF9243_0706 HMPREF9243_0706 HMPREF9243_0706 715591 716775 + transporter%2C CPA2 family identified by match to protein family HMM PF00999 gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0706 HMPREF9243_0707 HMPREF9243_0707 HMPREF9243_0707 717028 717570 + hypothetical protein gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0707 HMPREF9243_0708 HMPREF9243_0708 HMPREF9243_0708 717712 718716 + putative phage tail component domain protein identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532 gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0708 HMPREF9243_0709 HMPREF9243_0709 HMPREF9243_0709 718845 719792 + PTS system fructose IIA component identified by match to protein family HMM PF03610%3B match to protein family HMM PF03830 gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0709 HMPREF9243_0710 HMPREF9243_0710 HMPREF9243_0710 719805 720617 + PTS system sorbose-specific iic component identified by match to protein family HMM PF03609 gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0710 HMPREF9243_0711 HMPREF9243_0711 HMPREF9243_0711 720812 721456 + putative fructose permease IID component%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF03613 pseudogene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0711 HMPREF9243_0712 HMPREF9243_0712 HMPREF9243_0712 721474 722424 + putative oligo-1%2C6-glucosidase 1%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00128 pseudogene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0712 HMPREF9243_0713 HMPREF9243_0713 HMPREF9243_0713 722592 722801 + oligo-1%2C6-glucosidase 1 domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0713 HMPREF9243_0714 HMPREF9243_0714 HMPREF9243_0714 722798 723154 + oligo-1%2C6-glucosidase 1 domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0714 HMPREF9243_0715 HMPREF9243_0715 HMPREF9243_0715 723331 725070 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0715 HMPREF9243_0716 HMPREF9243_0716 HMPREF9243_0716 725071 726807 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0716 HMPREF9243_0717 HMPREF9243_0717 HMPREF9243_0717 726886 727584 + hypothetical protein gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0717 HMPREF9243_0718 HMPREF9243_0718 deoC deoC 727619 728296 + deoxyribose-phosphate aldolase identified by match to protein family HMM PF01791%3B match to protein family HMM TIGR00126 gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0718 HMPREF9243_0719 HMPREF9243_0719 HMPREF9243_0719 728380 729480 - Tat pathway signal sequence domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0719 HMPREF9243_0720 HMPREF9243_0720 HMPREF9243_0720 729485 730114 - putative RNA polymerase sigma factor SigI gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0720 HMPREF9243_0721 HMPREF9243_0721 HMPREF9243_0721 730471 731361 + hypothetical protein identified by glimmer%3B putative gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0721 HMPREF9243_0722 HMPREF9243_0722 HMPREF9243_0722 731442 731852 + SCP-like protein identified by match to protein family HMM PF00188 gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0722 HMPREF9243_0723 HMPREF9243_0723 HMPREF9243_0723 731937 732839 + hypothetical protein identified by glimmer%3B putative gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0723 HMPREF9243_0724 HMPREF9243_0724 HMPREF9243_0724 732888 733418 - transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0724 HMPREF9243_0725 HMPREF9243_0725 HMPREF9243_0725 733677 735191 - FAD binding domain protein identified by match to protein family HMM PF00890 gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0725 HMPREF9243_0726 HMPREF9243_0726 HMPREF9243_0726 735411 736118 + hypothetical protein gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0726 HMPREF9243_0727 HMPREF9243_0727 HMPREF9243_0727 736325 737197 + transcriptional regulator%2C RpiR family identified by match to protein family HMM PF01380%3B match to protein family HMM PF01418 gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0727 HMPREF9243_0728 HMPREF9243_0728 HMPREF9243_0728 737194 737886 + putative N-acetylmannosamine-6-phosphate epimerase identified by match to protein family HMM PF04131 gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0728 HMPREF9243_0729 HMPREF9243_0729 HMPREF9243_0729 737902 739881 + PTS system%2C glucose-like IIB component identified by match to protein family HMM PF00358%3B match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR00830 gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0729 HMPREF9243_0730 HMPREF9243_0730 nagA nagA 739956 741098 + N-acetylglucosamine-6-phosphate deacetylase identified by match to protein family HMM PF01979%3B match to protein family HMM TIGR00221 gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0730 HMPREF9243_0731 HMPREF9243_0731 HMPREF9243_0731 741547 742560 + ribonucleoside-diphosphate reductase%2C beta subunit identified by match to protein family HMM PF00268 gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0731 HMPREF9243_0732 HMPREF9243_0732 nrdI nrdI 742560 742988 + nrdI protein identified by match to protein family HMM PF07972%3B match to protein family HMM TIGR00333 gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0732 HMPREF9243_0733 HMPREF9243_0733 HMPREF9243_0733 743039 745237 + ribonucleoside-diphosphate reductase%2C alpha subunit identified by match to protein family HMM PF00317%3B match to protein family HMM PF02867%3B match to protein family HMM PF08343%3B match to protein family HMM TIGR02506 gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0733 HMPREF9243_0734 HMPREF9243_0734 HMPREF9243_0734 745328 746005 - phosphoglycerate mutase 1 family identified by match to protein family HMM PF00300%3B match to protein family HMM TIGR01258 gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0734 HMPREF9243_0735 HMPREF9243_0735 HMPREF9243_0735 746150 746821 - phosphoglycerate mutase 1 family identified by match to protein family HMM PF00300%3B match to protein family HMM TIGR01258 gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0735 HMPREF9243_0736 HMPREF9243_0736 HMPREF9243_0736 747144 747716 + flavin reductase identified by match to protein family HMM PF03358 gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0736 HMPREF9243_0737 HMPREF9243_0737 HMPREF9243_0737 747781 748338 - hypothetical protein gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0737 HMPREF9243_0738 HMPREF9243_0738 spxB spxB 748509 750296 + pyruvate oxidase identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776%3B match to protein family HMM TIGR02720 gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0738 HMPREF9243_0739 HMPREF9243_0739 HMPREF9243_0739 750532 751632 - hypothetical protein gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0739 HMPREF9243_0740 HMPREF9243_0740 HMPREF9243_0740 751840 752712 - transcriptional activator%2C Rgg/GadR/MutR family domain protein identified by match to protein family HMM TIGR01716 gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0740 HMPREF9243_0741 HMPREF9243_0741 gshAB gshAB 752964 755258 + glutamate--cysteine ligase/gamma-glutamylcysteine synthetase identified by match to protein family HMM PF01071%3B match to protein family HMM PF04262%3B match to protein family HMM TIGR01435 gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0741 HMPREF9243_0742 HMPREF9243_0742 HMPREF9243_0742 755323 755874 + transposase identified by match to protein family HMM PF01527 gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0742 HMPREF9243_0743 HMPREF9243_0743 HMPREF9243_0743 755874 756764 + integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0743 HMPREF9243_0744 HMPREF9243_0744 HMPREF9243_0744 757343 758428 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402 gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0744 HMPREF9243_0745 HMPREF9243_0745 HMPREF9243_0745 758421 759299 + ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0745 HMPREF9243_0746 HMPREF9243_0746 HMPREF9243_0746 759296 760135 + ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0746 HMPREF9243_0747 HMPREF9243_0747 HMPREF9243_0747 760132 761493 + ABC transporter%2C solute-binding protein identified by match to protein family HMM PF01547 gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0747 HMPREF9243_0748 HMPREF9243_0748 HMPREF9243_0748 761607 762296 + flavodoxin-like protein identified by match to protein family HMM PF02525 gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0748 HMPREF9243_0749 HMPREF9243_0749 HMPREF9243_0749 762306 762494 + hypothetical protein gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0749 HMPREF9243_0750 HMPREF9243_0750 HMPREF9243_0750 762627 762740 - conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0750 HMPREF9243_0751 HMPREF9243_0751 HMPREF9243_0751 762797 763180 - conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0751 HMPREF9243_0752 HMPREF9243_0752 HMPREF9243_0752 763260 764597 - transcriptional regulator%2C GntR family identified by match to protein family HMM PF00392 gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0752 HMPREF9243_0753 HMPREF9243_0753 HMPREF9243_0753 764789 765664 + pyridoxal 5'-phosphate synthase%2C synthase subunit Pdx1 identified by match to protein family HMM PF01680%3B match to protein family HMM PF05690%3B match to protein family HMM TIGR00343 gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0753 HMPREF9243_0754 HMPREF9243_0754 pdxT pdxT 765666 766250 + pyridoxal 5'-phosphate synthase%2C glutaminase subunit Pdx2 identified by match to protein family HMM PF01174%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR03800 gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0754 HMPREF9243_0755 HMPREF9243_0755 HMPREF9243_0755 766323 766829 - hypothetical protein gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0755 HMPREF9243_0756 HMPREF9243_0756 HMPREF9243_0756 766844 767608 - hypothetical protein identified by match to protein family HMM PF06738 gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0756 HMPREF9243_0757 HMPREF9243_0757 HMPREF9243_0757 767763 768635 - hypothetical protein identified by match to protein family HMM PF06161 gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0757 HMPREF9243_0758 HMPREF9243_0758 HMPREF9243_0758 768850 769401 - flavin reductase identified by match to protein family HMM PF03358 gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0758 HMPREF9243_0759 HMPREF9243_0759 HMPREF9243_0759 769627 770916 + ImpB/MucB/SamB family protein identified by match to protein family HMM PF00817 gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0759 HMPREF9243_0760 HMPREF9243_0760 HMPREF9243_0760 771014 771346 + LPXTG-motif cell wall anchor domain protein identified by match to protein family HMM PF00746%3B match to protein family HMM TIGR01167 gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0760 HMPREF9243_0762 HMPREF9243_0762 HMPREF9243_0762 771695 772534 + lipoprotein%2C YaeC family identified by match to protein family HMM PF03180%3B match to protein family HMM TIGR00363 gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0762 HMPREF9243_0763 HMPREF9243_0763 HMPREF9243_0763 772595 773809 + amidohydrolase identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891 gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0763 HMPREF9243_0764 HMPREF9243_0764 HMPREF9243_0764 774191 784030 + KxYKxGKxW signal domain protein identified by match to protein family HMM PF08428%3B match to protein family HMM PF09479%3B match to protein family HMM TIGR01167%3B match to protein family HMM TIGR02331%3B match to protein family HMM TIGR02543%3B match to protein family HMM TIGR03715 gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0764 HMPREF9243_0765 HMPREF9243_0765 HMPREF9243_0765 784568 785524 + preprotein translocase%2C SecY subunit%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00344 pseudogene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0765 HMPREF9243_0766 HMPREF9243_0766 asp1 asp1 785543 787051 + accessory Sec system protein Asp1 identified by match to protein family HMM TIGR03713 gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0766 HMPREF9243_0767 HMPREF9243_0767 asp2 asp2 787048 788586 + accessory Sec system protein Asp2 identified by match to protein family HMM TIGR03712 gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0767 HMPREF9243_0768 HMPREF9243_0768 asp3 asp3 788577 789539 + accessory Sec system protein Asp3 identified by match to protein family HMM TIGR03711 gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0768 HMPREF9243_0769 HMPREF9243_0769 secA2 secA2 789526 791898 + accessory Sec system translocase SecA2 identified by match to protein family HMM PF01043%3B match to protein family HMM PF07516%3B match to protein family HMM PF07517%3B match to protein family HMM TIGR03714 gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0769 HMPREF9243_0770 HMPREF9243_0770 gtfA gtfA 791915 793426 + accessory Sec system glycosylation protein GtfA identified by match to protein family HMM PF00534%3B match to protein family HMM PF09318%3B match to protein family HMM TIGR02918 gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0770 HMPREF9243_0771 HMPREF9243_0771 gtfB gtfB 793423 794757 + accessory Sec system glycosyltransferase GtfB identified by match to protein family HMM TIGR02919 gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0771 HMPREF9243_0772 HMPREF9243_0772 HMPREF9243_0772 794765 794959 + hypothetical protein identified by glimmer%3B putative gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0772 HMPREF9243_0773 HMPREF9243_0773 HMPREF9243_0773 794987 797653 + glycosyltransferase%2C SP_1767 family identified by match to protein family HMM PF08759%3B match to protein family HMM TIGR03728 gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0773 HMPREF9243_0774 HMPREF9243_0774 HMPREF9243_0774 797650 798936 + glycosyltransferase%2C group 2 family protein identified by match to protein family HMM PF00535 gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0774 HMPREF9243_0775 HMPREF9243_0775 HMPREF9243_0775 799183 800076 + putative membrane protein identified by match to protein family HMM PF00892 gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0775 HMPREF9243_0776 HMPREF9243_0776 HMPREF9243_0776 800168 801010 - phospholipase%2C patatin family identified by match to protein family HMM PF01734 gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0776 HMPREF9243_0777 HMPREF9243_0777 HMPREF9243_0777 801202 802527 + transposase identified by match to protein family HMM PF01610 gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0777 HMPREF9243_0778 HMPREF9243_0778 HMPREF9243_0778 802840 803529 - putative serine O-acetyltransferase identified by match to protein family HMM PF00132 gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0778 HMPREF9243_0779 HMPREF9243_0779 cysK cysK 803516 804433 - cysteine synthase A identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01136%3B match to protein family HMM TIGR01139 gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0779 HMPREF9243_0780 HMPREF9243_0780 fni fni 804648 805700 - isopentenyl-diphosphate delta-isomerase%2C type 2 identified by match to protein family HMM PF01070%3B match to protein family HMM TIGR02151 gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0780 HMPREF9243_0781 HMPREF9243_0781 HMPREF9243_0781 805774 806895 - phosphomevalonate kinase identified by match to protein family HMM PF00288%3B match to protein family HMM PF08544%3B match to protein family HMM TIGR01220 gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0781 HMPREF9243_0782 HMPREF9243_0782 mvaD mvaD 806896 808137 - diphosphomevalonate decarboxylase identified by match to protein family HMM PF00288%3B match to protein family HMM PF08544%3B match to protein family HMM TIGR01240 gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0782 HMPREF9243_0783 HMPREF9243_0783 mvk mvk 808141 809115 - mevalonate kinase identified by match to protein family HMM PF00288%3B match to protein family HMM PF08544%3B match to protein family HMM TIGR00549 gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0783 HMPREF9243_0784 HMPREF9243_0784 guaA guaA 809375 810925 + GMP synthase (glutamine-hydrolyzing) domain protein identified by match to protein family HMM PF00117%3B match to protein family HMM PF00958%3B match to protein family HMM TIGR00884%3B match to protein family HMM TIGR00888 gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0784 HMPREF9243_0785 HMPREF9243_0785 HMPREF9243_0785 810980 811195 - hypothetical protein gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0785 HMPREF9243_0786 HMPREF9243_0786 HMPREF9243_0786 811238 812602 - hypothetical protein gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0786 HMPREF9243_0787 HMPREF9243_0787 HMPREF9243_0787 813034 813357 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0787 HMPREF9243_0788 HMPREF9243_0788 HMPREF9243_0788 813369 813497 - hypothetical protein identified by glimmer%3B putative gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0788 HMPREF9243_0789 HMPREF9243_0789 HMPREF9243_0789 813716 814642 - hypothetical protein identified by match to protein family HMM PF09557%3B match to protein family HMM TIGR02271 gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0789 HMPREF9243_0790 HMPREF9243_0790 HMPREF9243_0790 814724 814879 - hypothetical protein identified by glimmer%3B putative gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0790 HMPREF9243_0791 HMPREF9243_0791 HMPREF9243_0791 814954 815469 - M42 glutamyl aminopeptidase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF05343 pseudogene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0791 HMPREF9243_0792 HMPREF9243_0792 HMPREF9243_0792 815457 816041 - M42 glutamyl aminopeptidase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF05343 pseudogene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0792 HMPREF9243_0793 HMPREF9243_0793 HMPREF9243_0793 816226 816876 - hypothetical protein gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0793 HMPREF9243_0794 HMPREF9243_0794 HMPREF9243_0794 817114 818202 + hydrolase%2C alpha/beta domain protein identified by match to protein family HMM PF00561 gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0794 HMPREF9243_0795 HMPREF9243_0795 HMPREF9243_0795 818249 818935 + methyltransferase%2C YaeB family identified by match to protein family HMM PF01980%3B match to protein family HMM TIGR00104 gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0795 HMPREF9243_0796 HMPREF9243_0796 HMPREF9243_0796 819029 819583 + LemA family protein identified by match to protein family HMM PF04011 gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0796 HMPREF9243_0797 HMPREF9243_0797 HMPREF9243_0797 819577 821388 + hypothetical protein gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0797 HMPREF9243_0798 HMPREF9243_0798 HMPREF9243_0798 821588 822229 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0798 HMPREF9243_0799 HMPREF9243_0799 HMPREF9243_0799 822404 824431 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF02687 gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0799 HMPREF9243_0800 HMPREF9243_0800 HMPREF9243_0800 824551 825459 + hypothetical protein identified by match to protein family HMM PF04018 gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0800 HMPREF9243_0801 HMPREF9243_0801 HMPREF9243_0801 825662 826555 + hypothetical protein gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0801 HMPREF9243_0802 HMPREF9243_0802 nagE nagE 826589 828082 + PTS system%2C N-acetylglucosamine-specific IIBC component identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR01998 gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0802 HMPREF9243_0803 HMPREF9243_0803 HMPREF9243_0803 828249 828827 + hypothetical protein gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0803 HMPREF9243_0804 HMPREF9243_0804 HMPREF9243_0804 828843 829313 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0804 HMPREF9243_0805 HMPREF9243_0805 HMPREF9243_0805 829274 829411 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0805 HMPREF9243_0806 HMPREF9243_0806 HMPREF9243_0806 829633 832020 + MutS2 family protein identified by match to protein family HMM PF00488%3B match to protein family HMM PF01713%3B match to protein family HMM TIGR01069 gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0806 HMPREF9243_0807 HMPREF9243_0807 trxA trxA 832180 832494 + thioredoxin identified by match to protein family HMM PF00085%3B match to protein family HMM TIGR01068 gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0807 HMPREF9243_0808 HMPREF9243_0808 HMPREF9243_0808 832741 833169 + hypothetical protein identified by glimmer%3B putative gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0808 HMPREF9243_0809 HMPREF9243_0809 mgsA mgsA 833244 833711 - methylglyoxal synthase identified by match to protein family HMM PF02142%3B match to protein family HMM TIGR00160 gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0809 HMPREF9243_0810 HMPREF9243_0810 HMPREF9243_0810 833807 835027 - putative sodium/glutamate symporter identified by match to protein family HMM PF03616 gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0810 HMPREF9243_0811 HMPREF9243_0811 murI murI 835383 836204 + glutamate racemase identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00067 gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0811 HMPREF9243_0812 HMPREF9243_0812 rdgB rdgB 836208 836741 + non-canonical purine NTP pyrophosphatase RdgB%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01725%3B match to protein family HMM TIGR00042 pseudogene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0812 HMPREF9243_0813 HMPREF9243_0813 HMPREF9243_0813 836818 837318 + phosphodiesterase family protein identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00040 gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0813 HMPREF9243_0814 HMPREF9243_0814 HMPREF9243_0814 837790 838671 - transporter%2C small conductance mechanosensitive ion channel MscS family protein identified by match to protein family HMM PF00924 gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0814 HMPREF9243_0815 HMPREF9243_0815 HMPREF9243_0815 838839 839357 + hypothetical protein identified by match to protein family HMM PF06103 gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0815 HMPREF9243_0816 HMPREF9243_0816 HMPREF9243_0816 839401 839895 + hypothetical protein gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0816 HMPREF9243_0817 HMPREF9243_0817 HMPREF9243_0817 840163 841281 + transposase%2C IS116/IS110/IS902 family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02371 pseudogene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0817 HMPREF9243_0818 HMPREF9243_0818 HMPREF9243_0818 841785 842441 - V-type ATPase%2C D subunit identified by match to protein family HMM PF01813%3B match to protein family HMM TIGR00309 gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0818 HMPREF9243_0819 HMPREF9243_0819 HMPREF9243_0819 842441 843874 - ATP synthase ab domain protein identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874 gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0819 HMPREF9243_0820 HMPREF9243_0820 HMPREF9243_0820 843887 845650 - ATP synthase ab domain protein identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874 gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0820 HMPREF9243_0821 HMPREF9243_0821 HMPREF9243_0821 845654 846232 - hypothetical protein gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0821 HMPREF9243_0822 HMPREF9243_0822 HMPREF9243_0822 846247 846555 - ATP synthase%2C subunit F identified by match to protein family HMM PF01990 gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0822 HMPREF9243_0823 HMPREF9243_0823 HMPREF9243_0823 846555 847001 - ATP synthase subunit C identified by match to protein family HMM PF00137 gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0823 HMPREF9243_0824 HMPREF9243_0824 HMPREF9243_0824 847055 849007 - V-type ATPase 116kDa subunit family protein identified by match to protein family HMM PF01496 gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0824 HMPREF9243_0825 HMPREF9243_0825 HMPREF9243_0825 849022 850059 - hypothetical protein gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0825 HMPREF9243_0826 HMPREF9243_0826 HMPREF9243_0826 850052 850174 - hypothetical protein identified by glimmer%3B putative gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0826 HMPREF9243_0827 HMPREF9243_0827 HMPREF9243_0827 850225 850380 - hypothetical protein identified by glimmer%3B putative gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0827 HMPREF9243_0828 HMPREF9243_0828 HMPREF9243_0828 850722 851726 + type II/IV secretion system protein identified by match to protein family HMM PF00437 gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0828 HMPREF9243_0829 HMPREF9243_0829 comGB comGB 851770 852756 + ComG operon protein 2 identified by match to protein family HMM PF00482 gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0829 HMPREF9243_0830 HMPREF9243_0830 HMPREF9243_0830 852753 853076 + prepilin-type cleavage/methylation N-terminal domain protein identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532 gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0830 HMPREF9243_0831 HMPREF9243_0831 HMPREF9243_0831 853079 853531 + prepilin-type cleavage/methylation N-terminal domain protein gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0831 HMPREF9243_0832 HMPREF9243_0832 HMPREF9243_0832 853542 854171 + hypothetical protein gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0832 HMPREF9243_0833 HMPREF9243_0833 HMPREF9243_0833 854275 855117 + hypothetical protein identified by glimmer%3B putative gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0833 HMPREF9243_0834 HMPREF9243_0834 HMPREF9243_0834 855368 856447 + Creatinase identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321 gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0834 HMPREF9243_0835 HMPREF9243_0835 efp efp 856523 857080 + translation elongation factor P identified by match to protein family HMM PF01132%3B match to protein family HMM PF08207%3B match to protein family HMM PF09285%3B match to protein family HMM TIGR00038 gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0835 HMPREF9243_0836 HMPREF9243_0836 HMPREF9243_0836 857168 857626 + hypothetical protein identified by match to protein family HMM PF03780 gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0836 HMPREF9243_0837 HMPREF9243_0837 nusB nusB 857640 858224 + transcription antitermination factor NusB identified by match to protein family HMM PF01029%3B match to protein family HMM TIGR01951 gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0837 HMPREF9243_0838 HMPREF9243_0838 folD folD 858451 859302 + tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain protein identified by match to protein family HMM PF00763%3B match to protein family HMM PF02882 gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0838 HMPREF9243_0839 HMPREF9243_0839 xseA xseA 859295 860680 + exodeoxyribonuclease VII%2C large subunit identified by match to protein family HMM PF01336%3B match to protein family HMM PF02601%3B match to protein family HMM TIGR00237 gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0839 HMPREF9243_0840 HMPREF9243_0840 xseB xseB 860673 860918 + exodeoxyribonuclease VII%2C small subunit identified by match to protein family HMM PF02609%3B match to protein family HMM TIGR01280 gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0840 HMPREF9243_0841 HMPREF9243_0841 HMPREF9243_0841 860918 861817 + polyprenyl synthetase identified by match to protein family HMM PF00348 gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0841 HMPREF9243_0842 HMPREF9243_0842 HMPREF9243_0842 861820 862641 + putative ribosomal RNA large subunit methyltransferase J identified by match to protein family HMM PF01479%3B match to protein family HMM PF01728%3B match to protein family HMM TIGR00478 gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0842 HMPREF9243_0843 HMPREF9243_0843 recN recN 862657 864369 + DNA repair protein RecN identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00634 gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0843 HMPREF9243_0844 HMPREF9243_0844 miaA miaA 864356 865297 + tRNA dimethylallyltransferase identified by match to protein family HMM PF01715%3B match to protein family HMM TIGR00174 gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0844 HMPREF9243_0845 HMPREF9243_0845 hflX hflX 865317 866549 + GTP-binding protein HflX identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03156 gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0845 HMPREF9243_0846 HMPREF9243_0846 HMPREF9243_0846 866621 866694 - tRNA-Arg tRNA gene839 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0846 HMPREF9243_0847 HMPREF9243_0847 HMPREF9243_0847 866808 867479 + response regulator receiver domain protein identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0847 HMPREF9243_0848 HMPREF9243_0848 HMPREF9243_0848 867612 868019 + putative bacitracin ABC transporter%2C ATP-binding protein BcrA%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0848 HMPREF9243_0849 HMPREF9243_0849 HMPREF9243_0849 868016 868528 + putative bacitracin ABC transporter%2C ATP-binding protein BcrA%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0849 HMPREF9243_0850 HMPREF9243_0850 HMPREF9243_0850 868521 869417 + putative ATP synthase F0%2C A subunit gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0850 HMPREF9243_0851 HMPREF9243_0851 HMPREF9243_0851 869511 870410 + histidine kinase A domain protein identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0851 HMPREF9243_0852 HMPREF9243_0852 HMPREF9243_0852 870536 872353 + FAD binding domain protein identified by match to protein family HMM PF00890%3B match to protein family HMM PF04205 gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0852 HMPREF9243_0853 HMPREF9243_0853 HMPREF9243_0853 872618 872893 + hypothetical protein gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0853 HMPREF9243_0854 HMPREF9243_0854 HMPREF9243_0854 872897 873787 - integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0854 HMPREF9243_0855 HMPREF9243_0855 HMPREF9243_0855 873787 874338 - transposase identified by match to protein family HMM PF01527 gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0855 HMPREF9243_0856 HMPREF9243_0856 HMPREF9243_0856 874362 875276 + cell envelope-like function transcriptional attenuator common domain protein identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350 gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0856 HMPREF9243_0857 HMPREF9243_0857 HMPREF9243_0857 875366 876130 + chain length determinant protein identified by match to protein family HMM PF02706 gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0857 HMPREF9243_0858 HMPREF9243_0858 HMPREF9243_0858 876201 876845 + capsular exopolysaccharide family identified by match to protein family HMM TIGR01007 gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0858 HMPREF9243_0859 HMPREF9243_0859 HMPREF9243_0859 876873 877643 + PHP domain protein identified by match to protein family HMM PF02811 gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0859 HMPREF9243_0860 HMPREF9243_0860 HMPREF9243_0860 877688 879505 + polysaccharide biosynthesis protein identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993 gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0860 HMPREF9243_0861 HMPREF9243_0861 HMPREF9243_0861 879523 880152 + bacterial sugar transferase identified by match to protein family HMM PF02397 gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0861 HMPREF9243_0862 HMPREF9243_0862 HMPREF9243_0862 880149 880997 + NAD dependent epimerase/dehydratase family protein identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993 gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0862 HMPREF9243_0863 HMPREF9243_0863 HMPREF9243_0863 880997 882097 + glycosyltransferase%2C group 1 family protein identified by match to protein family HMM PF00534 gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0863 HMPREF9243_0864 HMPREF9243_0864 HMPREF9243_0864 882403 883302 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0864 HMPREF9243_0865 HMPREF9243_0865 HMPREF9243_0865 883393 884514 + hypothetical protein gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0865 HMPREF9243_0866 HMPREF9243_0866 HMPREF9243_0866 884517 885266 + hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative pseudogene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0866 HMPREF9243_0867 HMPREF9243_0867 HMPREF9243_0867 885332 885514 + hypothetical protein gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0867 HMPREF9243_0868 HMPREF9243_0868 HMPREF9243_0868 885519 885917 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0868 HMPREF9243_0869 HMPREF9243_0869 HMPREF9243_0869 885929 886543 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0869 HMPREF9243_0870 HMPREF9243_0870 HMPREF9243_0870 886607 887653 + UDP-N-acetylglucosamine 2-epimerase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02350%3B match to protein family HMM TIGR00236 pseudogene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0870 HMPREF9243_0871 HMPREF9243_0871 HMPREF9243_0871 887672 888394 + glycosyltransferase%2C group 2 family protein identified by match to protein family HMM PF00535 gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0871 HMPREF9243_0872 HMPREF9243_0872 HMPREF9243_0872 888385 888651 + hypothetical protein identified by glimmer%3B putative gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0872 HMPREF9243_0873 HMPREF9243_0873 HMPREF9243_0873 888676 890091 + polysaccharide biosynthesis protein identified by match to protein family HMM PF01943%3B match to protein family HMM PF03023 gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0873 HMPREF9243_0874 HMPREF9243_0874 HMPREF9243_0874 890222 891388 + nucleotide sugar dehydrogenase identified by match to protein family HMM PF00984%3B match to protein family HMM PF01210%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026 gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0874 HMPREF9243_0875 HMPREF9243_0875 HMPREF9243_0875 891562 892833 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0875 HMPREF9243_0876 HMPREF9243_0876 HMPREF9243_0876 893163 893702 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0876 HMPREF9243_0877 HMPREF9243_0877 HMPREF9243_0877 893357 893451 + putative Small nucleolar RNA SNORD91 family putative Small nucleolar RNA SNORD91 family%3B Rfam score 26.67 snoRNA gene870 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0877 HMPREF9243_0878 HMPREF9243_0878 HMPREF9243_0878 893894 895681 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0878 HMPREF9243_0879 HMPREF9243_0879 HMPREF9243_0879 895883 896668 + hypothetical protein identified by match to protein family HMM PF08861 gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0879 HMPREF9243_0880 HMPREF9243_0880 HMPREF9243_0880 897487 897624 - SpoVT/AbrB-like protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF04014 pseudogene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0880 HMPREF9243_0881 HMPREF9243_0881 HMPREF9243_0881 898515 899321 + ATPase%2C AAA family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00004%3B match to protein family HMM PF07728 pseudogene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0881 HMPREF9243_0882 HMPREF9243_0882 HMPREF9243_0882 899321 899503 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0882 HMPREF9243_0883 HMPREF9243_0883 HMPREF9243_0883 899553 901796 + hypothetical protein gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0883 HMPREF9243_0884 HMPREF9243_0884 HMPREF9243_0884 901968 902285 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0884 HMPREF9243_0885 HMPREF9243_0885 HMPREF9243_0885 902458 903996 + bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon family protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0885 HMPREF9243_0886 HMPREF9243_0886 HMPREF9243_0886 904590 905045 + phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 identified by match to protein family HMM PF00359 gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0886 HMPREF9243_0887 HMPREF9243_0887 HMPREF9243_0887 905042 905326 + PTS system%2C Lactose/Cellobiose specific IIB subunit identified by match to protein family HMM PF02302 gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0887 HMPREF9243_0888 HMPREF9243_0888 HMPREF9243_0888 905323 906597 + putative sugar-specific permease%2C SgaT/UlaA identified by match to protein family HMM PF04215 gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0888 HMPREF9243_0889 HMPREF9243_0889 HMPREF9243_0889 906736 907257 + DNA polymerase III%2C epsilon subunit identified by match to protein family HMM PF00929 gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0889 HMPREF9243_0890 HMPREF9243_0890 HMPREF9243_0890 907413 908279 + polyphosphate:nucleotide phosphotransferase%2C PPK2 family identified by match to protein family HMM PF03976%3B match to protein family HMM TIGR03709 gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0890 HMPREF9243_0891 HMPREF9243_0891 HMPREF9243_0891 908424 908645 - DNA-binding helix-turn-helix protein identified by match to protein family HMM PF01381 gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0891 HMPREF9243_0892 HMPREF9243_0892 HMPREF9243_0892 908645 908971 - hypothetical protein gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0892 HMPREF9243_0893 HMPREF9243_0893 HMPREF9243_0893 909168 911699 - peptidase family M1 identified by match to protein family HMM PF01433 gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0893 HMPREF9243_0894 HMPREF9243_0894 HMPREF9243_0894 911902 911973 + tRNA-Glu tRNA gene887 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0894 HMPREF9243_0895 HMPREF9243_0895 HMPREF9243_0895 912176 913063 - hypothetical protein identified by glimmer%3B putative gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0895 HMPREF9243_0896 HMPREF9243_0896 HMPREF9243_0896 913130 913348 - DNA-binding helix-turn-helix protein identified by match to protein family HMM PF01381 gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0896 HMPREF9243_0897 HMPREF9243_0897 glcR glcR 913539 914315 + HTH-type transcriptional repressor GlcR identified by match to protein family HMM PF00455%3B match to protein family HMM PF08220%3B match to protein family HMM PF08279 gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0897 HMPREF9243_0898 HMPREF9243_0898 HMPREF9243_0898 914296 915120 + Cof-like hydrolase identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0898 HMPREF9243_0899 HMPREF9243_0899 HMPREF9243_0899 915151 915675 + hypothetical protein gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0899 HMPREF9243_0900 HMPREF9243_0900 HMPREF9243_0900 915841 916743 + putative ribokinase identified by match to protein family HMM PF00294 gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0900 HMPREF9243_0901 HMPREF9243_0901 HMPREF9243_0901 916900 917496 + hypothetical protein gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0901 HMPREF9243_0902 HMPREF9243_0902 HMPREF9243_0902 917868 918158 + hypothetical protein gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0902 HMPREF9243_0903 HMPREF9243_0903 HMPREF9243_0903 918263 919225 + YihY family protein identified by match to protein family HMM PF03631%3B match to protein family HMM TIGR00765 gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0903 HMPREF9243_0904 HMPREF9243_0904 HMPREF9243_0904 919261 920547 + cell cycle protein%2C FtsW/RodA/SpoVE family identified by match to protein family HMM PF01098 gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0904 HMPREF9243_0905 HMPREF9243_0905 HMPREF9243_0905 920525 920887 + transcriptional regulator%2C Spx/MgsR family identified by match to protein family HMM PF03960%3B match to protein family HMM TIGR01617 gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0905 HMPREF9243_0906 HMPREF9243_0906 HMPREF9243_0906 920890 921240 + glycine cleavage H-protein identified by match to protein family HMM PF01597 gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0906 HMPREF9243_0907 HMPREF9243_0907 HMPREF9243_0907 921288 921776 + hypothetical protein gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0907 HMPREF9243_0908 HMPREF9243_0908 HMPREF9243_0908 921859 922602 - peptidase C26 identified by match to protein family HMM PF00117%3B match to protein family HMM PF07722 gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0908 HMPREF9243_0909 HMPREF9243_0909 HMPREF9243_0909 922702 924606 + peptidase family M13 identified by match to protein family HMM PF01431%3B match to protein family HMM PF05649 gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0909 HMPREF9243_0910 HMPREF9243_0910 HMPREF9243_0910 925208 926851 + ABC transporter%2C substrate-binding protein%2C family 5 identified by match to protein family HMM PF00496 gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0910 HMPREF9243_0911 HMPREF9243_0911 HMPREF9243_0911 926915 928543 + ABC transporter%2C substrate-binding protein%2C family 5 identified by match to protein family HMM PF00496 gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0911 HMPREF9243_0912 HMPREF9243_0912 pepT pepT 928621 929871 + peptidase T identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01882 gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0912 HMPREF9243_0913 HMPREF9243_0913 xfp xfp 930047 932416 + D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase identified by match to protein family HMM PF03894%3B match to protein family HMM PF09363%3B match to protein family HMM PF09364 gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0913 HMPREF9243_0914 HMPREF9243_0914 argS argS 932590 934281 + arginine--tRNA ligase identified by match to protein family HMM PF00750%3B match to protein family HMM PF03485%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00456 gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0914 HMPREF9243_0915 HMPREF9243_0915 HMPREF9243_0915 934712 941470 + Gram-positive signal peptide protein%2C YSIRK family identified by match to protein family HMM PF00746%3B match to protein family HMM PF04650%3B match to protein family HMM PF08428%3B match to protein family HMM TIGR01167%3B match to protein family HMM TIGR01168%3B match to protein family HMM TIGR02331 gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0915 HMPREF9243_0916 HMPREF9243_0916 HMPREF9243_0916 942012 943391 + Gram-positive signal peptide protein%2C YSIRK family identified by match to protein family HMM PF04650%3B match to protein family HMM TIGR01168 gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0916 HMPREF9243_0917 HMPREF9243_0917 HMPREF9243_0917 943562 950335 + LPXTG-motif cell wall anchor domain protein identified by match to protein family HMM PF00746%3B match to protein family HMM PF05345%3B match to protein family HMM PF05738%3B match to protein family HMM TIGR01167 gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0917 HMPREF9243_0918 HMPREF9243_0918 HMPREF9243_0918 950465 951661 - O-antigen polymerase identified by match to protein family HMM PF04932 gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0918 HMPREF9243_0919 HMPREF9243_0919 HMPREF9243_0919 951846 952400 + hypothetical protein identified by glimmer%3B putative gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0919 HMPREF9243_0920 HMPREF9243_0920 HMPREF9243_0920 952406 952537 + hypothetical protein identified by glimmer%3B putative gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0920 HMPREF9243_0921 HMPREF9243_0921 gor gor 952516 953868 + glutathione-disulfide reductase identified by match to protein family HMM PF00070%3B match to protein family HMM PF01266%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01421 gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0921 HMPREF9243_0922 HMPREF9243_0922 HMPREF9243_0922 953989 954561 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0922 HMPREF9243_0923 HMPREF9243_0923 HMPREF9243_0923 954629 955150 - hypothetical protein gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0923 HMPREF9243_0924 HMPREF9243_0924 HMPREF9243_0924 955337 956197 + phosphogluconate dehydrogenase (decarboxylating)%2C NAD binding domain protein identified by match to protein family HMM PF03446 gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0924 HMPREF9243_0925 HMPREF9243_0925 HMPREF9243_0925 956267 957127 + DNA-binding helix-turn-helix protein identified by match to protein family HMM PF01381%3B match to protein family HMM TIGR01716 gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0925 HMPREF9243_0926 HMPREF9243_0926 HMPREF9243_0926 957142 958362 - hypothetical protein gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0926 HMPREF9243_0927 HMPREF9243_0927 HMPREF9243_0927 958391 958987 - methyltransferase domain protein identified by match to protein family HMM PF08242 gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0927 HMPREF9243_0928 HMPREF9243_0928 HMPREF9243_0928 959168 959737 - flavin reductase identified by match to protein family HMM PF02525%3B match to protein family HMM PF03358 gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0928 HMPREF9243_0929 HMPREF9243_0929 HMPREF9243_0929 959782 960858 - Luciferase-like monooxygenase identified by match to protein family HMM PF00296 gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0929 HMPREF9243_0930 HMPREF9243_0930 HMPREF9243_0930 960891 961958 - Luciferase-like monooxygenase identified by match to protein family HMM PF00296 gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0930 HMPREF9243_0931 HMPREF9243_0931 HMPREF9243_0931 961998 962450 - transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0931 HMPREF9243_0932 HMPREF9243_0932 purE purE 962965 963450 + phosphoribosylaminoimidazole carboxylase%2C catalytic subunit identified by match to protein family HMM PF00731%3B match to protein family HMM TIGR01162 gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0932 HMPREF9243_0933 HMPREF9243_0933 purK purK 963434 964573 + phosphoribosylaminoimidazole carboxylase%2C ATPase subunit identified by match to protein family HMM PF02222%3B match to protein family HMM TIGR01161 gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0933 HMPREF9243_0934 HMPREF9243_0934 purC purC 964573 965292 + phosphoribosylaminoimidazolesuccinocarboxamide synthase identified by match to protein family HMM PF01259%3B match to protein family HMM TIGR00081 gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0934 HMPREF9243_0935 HMPREF9243_0935 purS purS 965326 965571 + phosphoribosylformylglycinamidine synthase%2C purS protein identified by match to protein family HMM PF02700%3B match to protein family HMM TIGR00302 gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0935 HMPREF9243_0936 HMPREF9243_0936 purQ purQ 965577 966260 + phosphoribosylformylglycinamidine synthase I identified by match to protein family HMM PF07685%3B match to protein family HMM TIGR01737 gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0936 HMPREF9243_0937 HMPREF9243_0937 purL purL 966266 968491 + phosphoribosylformylglycinamidine synthase II identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR01736 gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0937 HMPREF9243_0938 HMPREF9243_0938 purF purF 968506 969969 + amidophosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM PF00310%3B match to protein family HMM TIGR01134 gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0938 HMPREF9243_0939 HMPREF9243_0939 purM purM 969962 971014 + phosphoribosylformylglycinamidine cyclo-ligase identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR00878 gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0939 HMPREF9243_0940 HMPREF9243_0940 purN purN 971011 971604 + phosphoribosylglycinamide formyltransferase identified by match to protein family HMM PF00551%3B match to protein family HMM TIGR00639 gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0940 HMPREF9243_0941 HMPREF9243_0941 purH purH 971585 973138 + phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase identified by match to protein family HMM PF01808%3B match to protein family HMM PF02142%3B match to protein family HMM TIGR00355 gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0941 HMPREF9243_0942 HMPREF9243_0942 purD purD 973155 974435 + phosphoribosylamine--glycine ligase identified by match to protein family HMM PF01071%3B match to protein family HMM PF02655%3B match to protein family HMM PF02843%3B match to protein family HMM PF02844%3B match to protein family HMM TIGR00877 gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0942 HMPREF9243_0943 HMPREF9243_0943 purB purB 974439 975743 + adenylosuccinate lyase identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00928 gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0943 HMPREF9243_0944 HMPREF9243_0944 HMPREF9243_0944 975818 976003 - hypothetical protein gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0944 HMPREF9243_0945 HMPREF9243_0945 HMPREF9243_0945 976575 976647 - tRNA-Thr tRNA gene938 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0945 HMPREF9243_0946 HMPREF9243_0946 HMPREF9243_0946 976850 977773 + putative neutral zinc metallopeptidase identified by match to protein family HMM PF04228 gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0946 HMPREF9243_0947 HMPREF9243_0947 HMPREF9243_0947 977945 979315 - pyridine nucleotide-disulfide oxidoreductase identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992 gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0947 HMPREF9243_0948 HMPREF9243_0948 HMPREF9243_0948 979606 982350 - putative potassium/sodium efflux P-type ATPase%2C fungal-type identified by match to protein family HMM PF00122%3B match to protein family HMM PF00689%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494 gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0948 HMPREF9243_0950 HMPREF9243_0950 HMPREF9243_0950 982692 984842 + Tex-like protein N-terminal domain protein identified by match to protein family HMM PF00575%3B match to protein family HMM PF09371 gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0950 HMPREF9243_0951 HMPREF9243_0951 HMPREF9243_0951 984936 985379 + metallopeptidase%2C SprT family identified by match to protein family HMM PF03926 gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0951 HMPREF9243_0952 HMPREF9243_0952 HMPREF9243_0952 985429 986397 - L-lactate dehydrogenase identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866%3B match to protein family HMM TIGR01771 gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0952 HMPREF9243_0953 HMPREF9243_0953 ackA ackA 986847 988037 + acetate kinase identified by match to protein family HMM PF00871%3B match to protein family HMM TIGR00016 gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0953 HMPREF9243_0954 HMPREF9243_0954 glpK glpK 988234 989745 + glycerol kinase identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782%3B match to protein family HMM TIGR01311 gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0954 HMPREF9243_0955 HMPREF9243_0955 HMPREF9243_0955 989770 991608 + FAD dependent oxidoreductase identified by match to protein family HMM PF01266 gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0955 HMPREF9243_0956 HMPREF9243_0956 HMPREF9243_0956 991641 992348 + MIP family channel protein identified by match to protein family HMM PF00230%3B match to protein family HMM TIGR00861 gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0956 HMPREF9243_0957 HMPREF9243_0957 HMPREF9243_0957 992902 993018 + hypothetical protein identified by glimmer%3B putative gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0957 HMPREF9243_0958 HMPREF9243_0958 HMPREF9243_0958 992446 992922 - universal stress family protein identified by match to protein family HMM PF00582 gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0958 HMPREF9243_0959 HMPREF9243_0959 HMPREF9243_0959 993061 993243 - 6S / SsrS RNA 6S / SsrS RNA%3B Rfam score 76.31 ncRNA gene951 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0959 HMPREF9243_0960 HMPREF9243_0960 HMPREF9243_0960 993338 994612 - recombination factor protein RarA identified by match to protein family HMM PF00004 gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0960 HMPREF9243_0961 HMPREF9243_0961 HMPREF9243_0961 994753 995877 + aminotransferase%2C class V identified by match to protein family HMM PF00266 gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0961 HMPREF9243_0962 HMPREF9243_0962 HMPREF9243_0962 995909 996256 + hypothetical protein gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0962 HMPREF9243_0963 HMPREF9243_0963 trmU trmU 996454 997578 + tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase identified by match to protein family HMM PF03054%3B match to protein family HMM TIGR00420 gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0963 HMPREF9243_0964 HMPREF9243_0964 HMPREF9243_0964 997856 1000321 + helicase%2C RecD/TraA family identified by match to protein family HMM TIGR01448 gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0964 HMPREF9243_0965 HMPREF9243_0965 HMPREF9243_0965 1000558 1001376 + Formate/nitrite transporter identified by match to protein family HMM PF01226 gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0965 HMPREF9243_0967 HMPREF9243_0967 alaS alaS 1001696 1004347 + alanine--tRNA ligase identified by match to protein family HMM PF01411%3B match to protein family HMM PF02272%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00344 gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0967 HMPREF9243_0968 HMPREF9243_0968 HMPREF9243_0968 1004410 1004673 + hypothetical protein identified by match to protein family HMM PF06135 gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0968 HMPREF9243_0969 HMPREF9243_0969 HMPREF9243_0969 1004676 1005098 + RNAse H domain protein%2C YqgF family identified by match to protein family HMM PF03652%3B match to protein family HMM TIGR00250 gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0969 HMPREF9243_0970 HMPREF9243_0970 HMPREF9243_0970 1005115 1005396 + hypothetical protein identified by match to protein family HMM PF06949 gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0970 HMPREF9243_0971 HMPREF9243_0971 HMPREF9243_0971 1005745 1006770 + YceG family protein identified by match to protein family HMM PF02618%3B match to protein family HMM TIGR00247 gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0971 HMPREF9243_0972 HMPREF9243_0972 greA greA 1006853 1007332 + transcription elongation factor GreA identified by match to protein family HMM PF01272%3B match to protein family HMM PF03449%3B match to protein family HMM TIGR01462 gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0972 HMPREF9243_0973 HMPREF9243_0973 HMPREF9243_0973 1008079 1008459 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0973 HMPREF9243_0974 HMPREF9243_0974 HMPREF9243_0974 1008414 1009325 + branched-chain amino acid transport protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF05525 pseudogene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0974 HMPREF9243_0975 HMPREF9243_0975 HMPREF9243_0975 1009531 1010583 + hypothetical protein gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0975 HMPREF9243_0976 HMPREF9243_0976 HMPREF9243_0976 1010832 1011194 + hypothetical protein identified by glimmer%3B putative gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0976 HMPREF9243_0977 HMPREF9243_0977 HMPREF9243_0977 1011411 1012421 + 3-oxoacyl-(acyl carrier protein) synthase III identified by match to protein family HMM PF02797%3B match to protein family HMM PF08541%3B match to protein family HMM PF08545 gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0977 HMPREF9243_0978 HMPREF9243_0978 HMPREF9243_0978 1012478 1012705 + putative acyl carrier protein identified by match to protein family HMM PF00550 gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0978 HMPREF9243_0979 HMPREF9243_0979 HMPREF9243_0979 1012747 1013700 + putative enoyl-[acyl-carrier-protein] reductase II identified by match to protein family HMM PF03060%3B match to protein family HMM TIGR03151 gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0979 HMPREF9243_0980 HMPREF9243_0980 fabD fabD 1013855 1014748 + [acyl-carrier-protein] S-malonyltransferase identified by match to protein family HMM TIGR00128 gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0980 HMPREF9243_0981 HMPREF9243_0981 fabG fabG 1014750 1015481 + 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659%3B match to protein family HMM TIGR01830 gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0981 HMPREF9243_0982 HMPREF9243_0982 fabF fabF 1015515 1016759 + beta-ketoacyl-acyl-carrier-protein synthase II identified by match to protein family HMM PF00109%3B match to protein family HMM PF02801%3B match to protein family HMM TIGR03150 gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0982 HMPREF9243_0983 HMPREF9243_0983 accB accB 1016759 1017241 + acetyl-CoA carboxylase%2C biotin carboxyl carrier protein identified by match to protein family HMM PF00364%3B match to protein family HMM TIGR00531 gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0983 HMPREF9243_0984 HMPREF9243_0984 fabZ fabZ 1017341 1017799 + beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ identified by match to protein family HMM PF03061%3B match to protein family HMM PF07977%3B match to protein family HMM TIGR01750 gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0984 HMPREF9243_0985 HMPREF9243_0985 accC accC 1017812 1019215 + acetyl-CoA carboxylase%2C biotin carboxylase subunit identified by match to protein family HMM PF00289%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786%3B match to protein family HMM TIGR00514 gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0985 HMPREF9243_0986 HMPREF9243_0986 accD accD 1019228 1020109 + acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit identified by match to protein family HMM TIGR00515 gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0986 HMPREF9243_0987 HMPREF9243_0987 accA accA 1020099 1020908 + Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit identified by match to protein family HMM PF03255 gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0987 HMPREF9243_0988 HMPREF9243_0988 HMPREF9243_0988 1021039 1021986 + hypothetical protein identified by glimmer%3B putative gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0988 HMPREF9243_0989 HMPREF9243_0989 rnhA rnhA 1021946 1022374 + ribonuclease HI gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0989 HMPREF9243_0990 HMPREF9243_0990 HMPREF9243_0990 1022503 1024056 - FMN-binding domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF04205 pseudogene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0990 HMPREF9243_0991 HMPREF9243_0991 HMPREF9243_0991 1024359 1025003 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0991 HMPREF9243_0992 HMPREF9243_0992 HMPREF9243_0992 1025142 1026026 + transporter%2C small conductance mechanosensitive ion channel MscS family protein identified by match to protein family HMM PF00924 gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0992 HMPREF9243_0993 HMPREF9243_0993 HMPREF9243_0993 1026140 1027957 + FAD binding domain protein identified by match to protein family HMM PF00890%3B match to protein family HMM PF01266%3B match to protein family HMM PF04205 gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0993 HMPREF9243_0994 HMPREF9243_0994 HMPREF9243_0994 1028146 1029408 + hypothetical protein gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0994 HMPREF9243_0995 HMPREF9243_0995 HMPREF9243_0995 1029580 1031055 + cytoplasmic alpha-amylase identified by match to protein family HMM PF00128 gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0995 HMPREF9243_0996 HMPREF9243_0996 HMPREF9243_0996 1031081 1031875 + inositol monophosphatase family protein identified by match to protein family HMM PF00459 gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0996 HMPREF9243_0997 HMPREF9243_0997 HMPREF9243_0997 1032048 1032398 + AmiS/UreI family transporter gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0997 HMPREF9243_0998 HMPREF9243_0998 HMPREF9243_0998 1032402 1033292 - integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0998 HMPREF9243_0999 HMPREF9243_0999 HMPREF9243_0999 1033292 1033843 - transposase identified by match to protein family HMM PF01527 gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_0999 HMPREF9243_1000 HMPREF9243_1000 HMPREF9243_1000 1034032 1034229 + hypothetical protein gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1000 HMPREF9243_1001 HMPREF9243_1001 HMPREF9243_1001 1034364 1035506 - hypothetical protein identified by match to protein family HMM PF01170 gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1001 HMPREF9243_1002 HMPREF9243_1002 rnpB rnpB 1035607 1035967 - Bacterial RNase P class B gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1002 HMPREF9243_1003 HMPREF9243_1003 HMPREF9243_1003 1036031 1036396 - DivIVA domain protein identified by match to protein family HMM PF05103%3B match to protein family HMM TIGR03544 gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1003 HMPREF9243_1004 HMPREF9243_1004 HMPREF9243_1004 1036614 1037111 + hypothetical protein identified by glimmer%3B putative gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1004 HMPREF9243_1005 HMPREF9243_1005 prmA prmA 1037127 1038077 + ribosomal protein L11 methyltransferase identified by match to protein family HMM PF05175%3B match to protein family HMM PF06325%3B match to protein family HMM TIGR00406 gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1005 HMPREF9243_1006 HMPREF9243_1006 HMPREF9243_1006 1038172 1040418 + RelA/SpoT family protein identified by match to protein family HMM PF01842%3B match to protein family HMM PF01966%3B match to protein family HMM PF02824%3B match to protein family HMM PF04607%3B match to protein family HMM TIGR00691 gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1006 HMPREF9243_1007 HMPREF9243_1007 dtd dtd 1040492 1040938 + D-tyrosyl-tRNA(Tyr) deacylase identified by match to protein family HMM PF02580%3B match to protein family HMM TIGR00256 gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1007 HMPREF9243_1008 HMPREF9243_1008 HMPREF9243_1008 1041219 1041845 + conserved domain protein%3B this gene contains a premature stop which may be the result of a sequencing error pseudogene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1008 HMPREF9243_1009 HMPREF9243_1009 HMPREF9243_1009 1041930 1042337 + transposase%2C IS116/IS110/IS902 family%3B this region contains one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF02371 pseudogene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1009 HMPREF9243_1010 HMPREF9243_1010 HMPREF9243_1010 1042790 1044016 - N-acetylmuramoyl-L-alanine amidase identified by match to protein family HMM PF01520%3B match to protein family HMM PF08239 gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1010 HMPREF9243_1011 HMPREF9243_1011 HMPREF9243_1011 1044405 1045853 + PRD domain protein identified by match to protein family HMM PF00874%3B match to protein family HMM PF08279 gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1011 HMPREF9243_1012 HMPREF9243_1012 HMPREF9243_1012 1045837 1046259 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1012 HMPREF9243_1013 HMPREF9243_1013 HMPREF9243_1013 1046256 1046567 + PTS system%2C Fru family%2C IIB component identified by match to protein family HMM PF02379%3B match to protein family HMM TIGR00829 gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1013 HMPREF9243_1014 HMPREF9243_1014 HMPREF9243_1014 1046581 1047039 + phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 identified by match to protein family HMM PF00359%3B match to protein family HMM TIGR00848 gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1014 HMPREF9243_1015 HMPREF9243_1015 HMPREF9243_1015 1047049 1048140 + phosphotransferase system%2C EIIC identified by match to protein family HMM PF02378%3B match to protein family HMM TIGR01427 gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1015 HMPREF9243_1016 HMPREF9243_1016 HMPREF9243_1016 1048162 1048851 + putative ribulose-phosphate 3-epimerase identified by match to protein family HMM PF00834 gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1016 HMPREF9243_1018 HMPREF9243_1018 hisS hisS 1049162 1050460 + histidine--tRNA ligase identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00442 gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1018 HMPREF9243_1019 HMPREF9243_1019 aspS aspS 1050460 1052229 + aspartate--tRNA ligase identified by match to protein family HMM PF00152%3B match to protein family HMM PF00587%3B match to protein family HMM PF01336%3B match to protein family HMM PF02938%3B match to protein family HMM TIGR00459 gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1019 HMPREF9243_1020 HMPREF9243_1020 HMPREF9243_1020 1052305 1052583 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1020 HMPREF9243_1021 HMPREF9243_1021 HMPREF9243_1021 1052679 1053329 + putative signal peptide peptidase SppA%2C 36K type%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01343 pseudogene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1021 HMPREF9243_1022 HMPREF9243_1022 HMPREF9243_1022 1053486 1053944 + RDD family protein identified by match to protein family HMM PF06271 gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1022 HMPREF9243_1023 HMPREF9243_1023 HMPREF9243_1023 1054089 1054916 - hypothetical protein identified by match to protein family HMM PF03618 gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1023 HMPREF9243_1024 HMPREF9243_1024 HMPREF9243_1024 1055016 1055459 + transcriptional regulator%2C Fur family identified by match to protein family HMM PF01475 gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1024 HMPREF9243_1025 HMPREF9243_1025 HMPREF9243_1025 1055575 1056522 - putative 2-keto-3-deoxygluconate transporter identified by match to protein family HMM PF03812 gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1025 HMPREF9243_1026 HMPREF9243_1026 HMPREF9243_1026 1056787 1057845 + basic membrane protein identified by match to protein family HMM PF02608 gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1026 HMPREF9243_1027 HMPREF9243_1027 HMPREF9243_1027 1057859 1059406 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1027 HMPREF9243_1028 HMPREF9243_1028 HMPREF9243_1028 1059399 1059668 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1028 HMPREF9243_1029 HMPREF9243_1029 HMPREF9243_1029 1059833 1060465 + branched-chain amino acid ABC transporter%2C permease protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02653 pseudogene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1029 HMPREF9243_1030 HMPREF9243_1030 HMPREF9243_1030 1060469 1061425 + branched-chain amino acid ABC transporter%2C permease protein identified by match to protein family HMM PF02653 gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1030 HMPREF9243_1031 HMPREF9243_1031 HMPREF9243_1031 1061444 1062376 + Inosine-uridine preferring nucleoside hydrolase identified by match to protein family HMM PF01156 gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1031 HMPREF9243_1032 HMPREF9243_1032 rpsU rpsU 1062534 1062707 + ribosomal protein S21 identified by match to protein family HMM PF01165%3B match to protein family HMM TIGR00030 gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1032 HMPREF9243_1033 HMPREF9243_1033 HMPREF9243_1033 1062744 1063187 + YqeY-like protein identified by match to protein family HMM PF09424 gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1033 HMPREF9243_1034 HMPREF9243_1034 HMPREF9243_1034 1063343 1064332 + PhoH family protein identified by match to protein family HMM PF02562 gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1034 HMPREF9243_1035 HMPREF9243_1035 ybeY ybeY 1064335 1064811 + translation metalloprotein YbeY identified by match to protein family HMM PF02130%3B match to protein family HMM TIGR00043 gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1035 HMPREF9243_1036 HMPREF9243_1036 HMPREF9243_1036 1064786 1065211 + prokaryotic diacylglycerol kinase identified by match to protein family HMM PF01219 gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1036 HMPREF9243_1037 HMPREF9243_1037 era era 1065230 1066141 + ribosome biogenesis GTPase Era identified by match to protein family HMM PF01926%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00436 gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1037 HMPREF9243_1038 HMPREF9243_1038 recO recO 1066175 1066942 + DNA repair protein RecO identified by match to protein family HMM PF02565%3B match to protein family HMM TIGR00613 gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1038 HMPREF9243_1040 HMPREF9243_1040 glyQ glyQ 1067247 1068173 + glycine--tRNA ligase%2C alpha subunit identified by match to protein family HMM PF02091%3B match to protein family HMM TIGR00388 gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1040 HMPREF9243_1041 HMPREF9243_1041 glyS glyS 1068166 1070259 + glycine--tRNA ligase%2C beta subunit identified by match to protein family HMM PF02092%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00211 gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1041 HMPREF9243_1042 HMPREF9243_1042 cgtA cgtA 1070290 1071624 + Obg family GTPase CgtA identified by match to protein family HMM PF01018%3B match to protein family HMM PF01926%3B match to protein family HMM PF09269%3B match to protein family HMM TIGR02729%3B match to protein family HMM TIGR03595 gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1042 HMPREF9243_1043 HMPREF9243_1043 rnz rnz 1071635 1072558 + ribonuclease Z identified by match to protein family HMM PF00753%3B match to protein family HMM TIGR02651 gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1043 HMPREF9243_1044 HMPREF9243_1044 HMPREF9243_1044 1072545 1072859 + conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error pseudogene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1044 HMPREF9243_1045 HMPREF9243_1045 HMPREF9243_1045 1072878 1073360 + conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error pseudogene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1045 HMPREF9243_1046 HMPREF9243_1046 recJ recJ 1073400 1075187 + single-stranded-DNA-specific exonuclease RecJ%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272%3B match to protein family HMM TIGR00644 pseudogene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1046 HMPREF9243_1047 HMPREF9243_1047 HMPREF9243_1047 1075391 1075717 + hypothetical protein gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1047 HMPREF9243_1048 HMPREF9243_1048 apt apt 1075714 1076229 + adenine phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01090 gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1048 HMPREF9243_1049 HMPREF9243_1049 lexA lexA 1076314 1076925 - repressor LexA identified by match to protein family HMM PF00717%3B match to protein family HMM PF01726%3B match to protein family HMM TIGR00498 gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1049 HMPREF9243_1050 HMPREF9243_1050 FbpA FbpA 1077075 1078730 - fibronectin-binding protein A domain protein identified by match to protein family HMM PF05670%3B match to protein family HMM PF05833 gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1050 HMPREF9243_1051 HMPREF9243_1051 HMPREF9243_1051 1078871 1079293 + pyridoxamine 5'-phosphate oxidase family protein identified by match to protein family HMM PF01243 gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1051 HMPREF9243_1052 HMPREF9243_1052 HMPREF9243_1052 1079690 1080202 + ComE operon protein 2 identified by match to protein family HMM PF00383%3B match to protein family HMM TIGR02571 gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1052 HMPREF9243_1053 HMPREF9243_1053 HMPREF9243_1053 1080322 1081668 + Glu/Leu/Phe/Val dehydrogenase%2C dimerization domain protein identified by match to protein family HMM PF00208%3B match to protein family HMM PF02812 gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1053 HMPREF9243_1054 HMPREF9243_1054 HMPREF9243_1054 1081766 1082623 + YjeF domain protein identified by match to protein family HMM PF01256%3B match to protein family HMM TIGR00196 gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1054 HMPREF9243_1055 HMPREF9243_1055 HMPREF9243_1055 1082616 1083074 + putative YbaK/EbsC protein identified by match to protein family HMM PF04073 gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1055 HMPREF9243_1056 HMPREF9243_1056 HMPREF9243_1056 1083040 1083375 - 5-formyltetrahydrofolate cyclo-ligase gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1056 HMPREF9243_1057 HMPREF9243_1057 HMPREF9243_1057 1083631 1084278 - putative endonuclease III identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730 gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1057 HMPREF9243_1058 HMPREF9243_1058 HMPREF9243_1058 1084366 1084800 - universal stress family protein identified by match to protein family HMM PF00582 gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1058 HMPREF9243_1059 HMPREF9243_1059 HMPREF9243_1059 1084816 1085244 - universal stress family protein identified by match to protein family HMM PF00582 gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1059 HMPREF9243_1060 HMPREF9243_1060 pnuC pnuC 1085423 1086049 + nicotinamide mononucleotide transporter PnuC identified by match to protein family HMM PF04973%3B match to protein family HMM TIGR01528 gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1060 HMPREF9243_1061 HMPREF9243_1061 HMPREF9243_1061 1086132 1087040 + lipid kinase%2C YegS/Rv2252/BmrU family identified by match to protein family HMM PF00781%3B match to protein family HMM TIGR00147 gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1061 HMPREF9243_1062 HMPREF9243_1062 HMPREF9243_1062 1087117 1089645 + hypothetical protein identified by match to protein family HMM PF04329%3B match to protein family HMM PF04330%3B match to protein family HMM PF04331 gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1062 HMPREF9243_1063 HMPREF9243_1063 HMPREF9243_1063 1089711 1090154 + hypothetical protein identified by glimmer%3B putative gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1063 HMPREF9243_1064 HMPREF9243_1064 HMPREF9243_1064 1090335 1092482 + PTS system%2C glucose-like IIB component identified by match to protein family HMM PF00358%3B match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR00830 gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1064 HMPREF9243_1065 HMPREF9243_1065 pip pip 1092701 1093639 + prolyl aminopeptidase identified by match to protein family HMM PF00561%3B match to protein family HMM TIGR01249 gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1065 HMPREF9243_1066 HMPREF9243_1066 HMPREF9243_1066 1093703 1094341 - metallo-beta-lactamase domain protein identified by match to protein family HMM PF00753 gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1066 HMPREF9243_1067 HMPREF9243_1067 HMPREF9243_1067 1094433 1094984 - flavin reductase identified by match to protein family HMM PF03358 gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1067 HMPREF9243_1068 HMPREF9243_1068 HMPREF9243_1068 1095216 1095578 + hypothetical protein identified by match to protein family HMM PF04304 gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1068 HMPREF9243_1069 HMPREF9243_1069 HMPREF9243_1069 1095583 1096455 - fructosamine kinase identified by match to protein family HMM PF01636%3B match to protein family HMM PF03881 gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1069 HMPREF9243_1070 HMPREF9243_1070 HMPREF9243_1070 1096523 1097344 - Cof-like hydrolase identified by match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1070 HMPREF9243_1071 HMPREF9243_1071 HMPREF9243_1071 1097522 1098730 + hypothetical protein gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1071 HMPREF9243_1072 HMPREF9243_1072 HMPREF9243_1072 1098771 1100324 + hypothetical protein gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1072 HMPREF9243_1073 HMPREF9243_1073 HMPREF9243_1073 1100518 1100823 + hypothetical protein identified by glimmer%3B putative gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1073 HMPREF9243_1074 HMPREF9243_1074 sodC sodC 1100899 1101369 + copper/zinc superoxide dismutase identified by match to protein family HMM PF00080 gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1074 HMPREF9243_1075 HMPREF9243_1075 HMPREF9243_1075 1101564 1102724 + succinyl-diaminopimelate desuccinylase identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01910 gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1075 HMPREF9243_1076 HMPREF9243_1076 HMPREF9243_1076 1102759 1103493 + hypothetical protein gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1076 HMPREF9243_1077 HMPREF9243_1077 HMPREF9243_1077 1103506 1104192 + hypothetical protein gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1077 HMPREF9243_1079 HMPREF9243_1079 HMPREF9243_1079 1104728 1105816 + methionine synthase%2C vitamin-B12 independent%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01717 pseudogene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1079 HMPREF9243_1080 HMPREF9243_1080 proV proV 1106101 1107276 + glycine betaine/L-proline transport ATP binding subunit identified by match to protein family HMM PF00005%3B match to protein family HMM PF00571%3B match to protein family HMM TIGR01186 gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1080 HMPREF9243_1081 HMPREF9243_1081 HMPREF9243_1081 1107279 1107920 + ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1081 HMPREF9243_1082 HMPREF9243_1082 HMPREF9243_1082 1107923 1108879 + ABC transporter%2C substrate-binding protein%2C QAT family identified by match to protein family HMM PF04069 gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1082 HMPREF9243_1083 HMPREF9243_1083 HMPREF9243_1083 1108883 1109554 + ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1083 HMPREF9243_1084 HMPREF9243_1084 HMPREF9243_1084 1109571 1110317 + hypothetical protein gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1084 HMPREF9243_1085 HMPREF9243_1085 HMPREF9243_1085 1110378 1110917 - hypothetical protein identified by match to protein family HMM PF06041 gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1085 HMPREF9243_1086 HMPREF9243_1086 HMPREF9243_1086 1111246 1112112 + LD-carboxypeptidase identified by match to protein family HMM PF02016 gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1086 HMPREF9243_1087 HMPREF9243_1087 HMPREF9243_1087 1112382 1113971 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1087 HMPREF9243_1088 HMPREF9243_1088 HMPREF9243_1088 1114102 1114518 + hypothetical protein identified by glimmer%3B putative gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1088 HMPREF9243_1089 HMPREF9243_1089 folK folK 1114854 1115327 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase identified by match to protein family HMM PF01288%3B match to protein family HMM TIGR01498 gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1089 HMPREF9243_1090 HMPREF9243_1090 folP folP 1115324 1115875 - dihydropteroate synthase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00809%3B match to protein family HMM TIGR01496 pseudogene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1090 HMPREF9243_1091 HMPREF9243_1091 HMPREF9243_1091 1115827 1116156 - dihydropteroate synthase domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1091 HMPREF9243_1092 HMPREF9243_1092 HMPREF9243_1092 1116399 1117733 - citrate transporter identified by match to protein family HMM PF02447%3B match to protein family HMM PF03600 gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1092 HMPREF9243_1093 HMPREF9243_1093 HMPREF9243_1093 1117764 1119635 - flavocytochrome c identified by match to protein family HMM PF00890%3B match to protein family HMM PF01266%3B match to protein family HMM PF04205%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01813 gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1093 HMPREF9243_1094 HMPREF9243_1094 HMPREF9243_1094 1119854 1120543 + transcriptional regulator%2C RpiR family identified by match to protein family HMM PF01380%3B match to protein family HMM PF01418 gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1094 HMPREF9243_1095 HMPREF9243_1095 HMPREF9243_1095 1120613 1121419 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1095 HMPREF9243_1096 HMPREF9243_1096 HMPREF9243_1096 1121436 1122323 - branched-chain amino acid ABC transporter%2C permease protein identified by match to protein family HMM PF02653 gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1096 HMPREF9243_1097 HMPREF9243_1097 HMPREF9243_1097 1122328 1123281 - ABC transporter substrate binding protein identified by match to protein family HMM PF04392 gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1097 HMPREF9243_1098 HMPREF9243_1098 HMPREF9243_1098 1124067 1124690 - hypothetical protein gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1098 HMPREF9243_1099 HMPREF9243_1099 HMPREF9243_1099 1124694 1126928 - putative stage V sporulation protein K identified by match to protein family HMM PF00004 gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1099 HMPREF9243_1100 HMPREF9243_1100 HMPREF9243_1100 1127840 1128775 - DHHA2 domain protein identified by match to protein family HMM PF01368%3B match to protein family HMM PF02833 gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1100 HMPREF9243_1101 HMPREF9243_1101 parC parC 1128906 1131362 - DNA topoisomerase IV%2C A subunit identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01061 gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1101 HMPREF9243_1102 HMPREF9243_1102 parE parE 1131352 1133427 - DNA topoisomerase IV%2C B subunit identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF01751%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01058 gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1102 HMPREF9243_1103 HMPREF9243_1103 codY codY 1134213 1135034 - CodY helix-turn-helix domain protein identified by match to protein family HMM PF06018 gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1103 HMPREF9243_1104 HMPREF9243_1104 HMPREF9243_1104 1135031 1135960 - phage integrase SAM-like domain protein identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899 gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1104 HMPREF9243_1105 HMPREF9243_1105 topA topA 1136126 1138216 - DNA topoisomerase I identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01051 gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1105 HMPREF9243_1106 HMPREF9243_1106 dprA dprA 1138304 1139188 - DNA protecting protein DprA identified by match to protein family HMM PF02481%3B match to protein family HMM TIGR00732 gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1106 HMPREF9243_1107 HMPREF9243_1107 rnhB rnhB 1139238 1140014 - ribonuclease HII identified by match to protein family HMM PF01351 gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1107 HMPREF9243_1108 HMPREF9243_1108 ylqF ylqF 1140007 1140888 - ribosome biogenesis GTP-binding protein YlqF identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03596 gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1108 HMPREF9243_1109 HMPREF9243_1109 lepB lepB 1140961 1141488 - signal peptidase I identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227 gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1109 HMPREF9243_1110 HMPREF9243_1110 HMPREF9243_1110 1141506 1142999 - peptidase%2C S41 family identified by match to protein family HMM PF00595%3B match to protein family HMM PF01471%3B match to protein family HMM PF03572%3B match to protein family HMM TIGR00225 gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1110 HMPREF9243_1111 HMPREF9243_1111 HMPREF9243_1111 1143140 1143361 - hypothetical protein identified by match to protein family HMM PF06855 gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1111 HMPREF9243_1112 HMPREF9243_1112 HMPREF9243_1112 1143363 1143995 - hypothetical protein gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1112 HMPREF9243_1113 HMPREF9243_1113 folA folA 1144014 1144514 - dihydrofolate reductase identified by match to protein family HMM PF00186 gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1113 HMPREF9243_1114 HMPREF9243_1114 thyA thyA 1144556 1145497 - thymidylate synthase identified by match to protein family HMM PF00303%3B match to protein family HMM TIGR03284 gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1114 HMPREF9243_1115 HMPREF9243_1115 HMPREF9243_1115 1145571 1147487 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1115 HMPREF9243_1116 HMPREF9243_1116 fhs fhs 1147560 1149242 - formate--tetrahydrofolate ligase identified by match to protein family HMM PF01268 gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1116 HMPREF9243_1117 HMPREF9243_1117 HMPREF9243_1117 1149491 1150324 - conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1117 HMPREF9243_1118 HMPREF9243_1118 HMPREF9243_1118 1150297 1150560 - conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1118 HMPREF9243_1119 HMPREF9243_1119 HMPREF9243_1119 1150662 1151003 - toxin-antitoxin system%2C toxin component%2C MazF family identified by match to protein family HMM PF02452 gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1119 HMPREF9243_1120 HMPREF9243_1120 HMPREF9243_1120 1151003 1151224 - hypothetical protein gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1120 HMPREF9243_1121 HMPREF9243_1121 lepA lepA 1151294 1153132 - GTP-binding protein LepA identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF06421%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01393 gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1121 HMPREF9243_1122 HMPREF9243_1122 HMPREF9243_1122 1153240 1153449 + hypothetical protein identified by glimmer%3B putative gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1122 HMPREF9243_1123 HMPREF9243_1123 HMPREF9243_1123 1153453 1154343 - integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1123 HMPREF9243_1124 HMPREF9243_1124 HMPREF9243_1124 1154343 1154894 - transposase identified by match to protein family HMM PF01527 gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1124 HMPREF9243_1125 HMPREF9243_1125 dnaJ dnaJ 1154990 1156150 - chaperone protein DnaJ identified by match to protein family HMM PF00226%3B match to protein family HMM PF00684%3B match to protein family HMM PF01556%3B match to protein family HMM TIGR02349 gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1125 HMPREF9243_1126 HMPREF9243_1126 dnaK dnaK 1156222 1158039 - chaperone protein DnaK identified by match to protein family HMM PF00012%3B match to protein family HMM TIGR02350 gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1126 HMPREF9243_1127 HMPREF9243_1127 grpE grpE 1158061 1158723 - co-chaperone GrpE identified by match to protein family HMM PF01025 gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1127 HMPREF9243_1128 HMPREF9243_1128 hrcA hrcA 1158728 1159798 - heat-inducible transcription repressor HrcA identified by match to protein family HMM PF01628%3B match to protein family HMM TIGR00331 gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1128 HMPREF9243_1129 HMPREF9243_1129 ribF ribF 1160106 1161062 - riboflavin biosynthesis protein RibF identified by match to protein family HMM PF01687%3B match to protein family HMM PF06574%3B match to protein family HMM TIGR00083 gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1129 HMPREF9243_1130 HMPREF9243_1130 truB truB 1161293 1162000 - tRNA pseudouridine synthase B%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01509%3B match to protein family HMM TIGR00431 pseudogene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1130 HMPREF9243_1131 HMPREF9243_1131 recQ recQ 1162015 1163805 - ATP-dependent DNA helicase RecQ identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF00570%3B match to protein family HMM PF09382%3B match to protein family HMM TIGR00614%3B match to protein family HMM TIGR01389 gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1131 HMPREF9243_1132 HMPREF9243_1132 HMPREF9243_1132 1164008 1165489 - aldehyde dehydrogenase (NAD) family protein identified by match to protein family HMM PF00171 gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1132 HMPREF9243_1133 HMPREF9243_1133 HMPREF9243_1133 1165578 1166384 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1133 HMPREF9243_1134 HMPREF9243_1134 HMPREF9243_1134 1166401 1167285 - branched-chain amino acid ABC transporter%2C permease protein identified by match to protein family HMM PF02653 gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1134 HMPREF9243_1135 HMPREF9243_1135 HMPREF9243_1135 1167460 1168332 - ABC transporter substrate binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF04392 pseudogene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1135 HMPREF9243_1136 HMPREF9243_1136 rbfA rbfA 1169120 1169473 - ribosome-binding factor A identified by match to protein family HMM PF02033%3B match to protein family HMM TIGR00082 gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1136 HMPREF9243_1137 HMPREF9243_1137 infB infB 1169495 1171657 - translation initiation factor IF-2%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00009%3B match to protein family HMM PF01926%3B match to protein family HMM PF03144%3B match to protein family HMM PF04760%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00487 pseudogene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1137 HMPREF9243_1138 HMPREF9243_1138 HMPREF9243_1138 1171830 1172111 - ribosomal protein L7Ae identified by match to protein family HMM PF01248 gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1138 HMPREF9243_1139 HMPREF9243_1139 HMPREF9243_1139 1172104 1172400 - hypothetical protein identified by match to protein family HMM PF04296 gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1139 HMPREF9243_1140 HMPREF9243_1140 nusA nusA 1172412 1173779 - transcription termination factor NusA identified by match to protein family HMM PF00575%3B match to protein family HMM PF08529%3B match to protein family HMM TIGR01953 gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1140 HMPREF9243_1141 HMPREF9243_1141 HMPREF9243_1141 1173792 1174265 - hypothetical protein identified by match to protein family HMM PF02576 gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1141 HMPREF9243_1142 HMPREF9243_1142 HMPREF9243_1142 1174372 1175031 - hypothetical protein gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1142 HMPREF9243_1143 HMPREF9243_1143 HMPREF9243_1143 1175064 1176524 - hypothetical protein identified by match to protein family HMM PF07556 gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1143 HMPREF9243_1144 HMPREF9243_1144 HMPREF9243_1144 1176549 1176863 - hypothetical protein gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1144 HMPREF9243_1145 HMPREF9243_1145 polC polC 1177072 1181385 - DNA polymerase III%2C alpha subunit%2C Gram-positive type identified by match to protein family HMM PF00929%3B match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00573%3B match to protein family HMM TIGR01405 gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1145 HMPREF9243_1146 HMPREF9243_1146 rseP rseP 1181437 1182699 - RIP metalloprotease RseP identified by match to protein family HMM PF00595%3B match to protein family HMM PF02163%3B match to protein family HMM TIGR00054 gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1146 HMPREF9243_1147 HMPREF9243_1147 cdsA cdsA 1182712 1183233 - phosphatidate cytidylyltransferase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01148 pseudogene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1147 HMPREF9243_1148 HMPREF9243_1148 HMPREF9243_1148 1183224 1183502 - conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1148 HMPREF9243_1149 HMPREF9243_1149 uppS uppS 1183518 1184258 - di-trans%2Cpoly-cis-decaprenylcistransferase identified by match to protein family HMM PF01255%3B match to protein family HMM TIGR00055 gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1149 HMPREF9243_1150 HMPREF9243_1150 frr frr 1184513 1185073 - ribosome recycling factor identified by match to protein family HMM PF01765%3B match to protein family HMM TIGR00496 gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1150 HMPREF9243_1151 HMPREF9243_1151 pyrH pyrH 1185078 1185794 - UMP kinase identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR02075 gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1151 HMPREF9243_1152 HMPREF9243_1152 tsf tsf 1185877 1186752 - translation elongation factor Ts identified by match to protein family HMM PF00627%3B match to protein family HMM PF00889%3B match to protein family HMM TIGR00116 gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1152 HMPREF9243_1153 HMPREF9243_1153 rpsB rpsB 1186900 1187685 - ribosomal protein S2 identified by match to protein family HMM PF00318%3B match to protein family HMM TIGR01011 gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1153 HMPREF9243_1154 HMPREF9243_1154 HMPREF9243_1154 1187859 1188437 - bacterial transferase hexapeptide repeat protein identified by match to protein family HMM PF00132 gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1154 HMPREF9243_1155 HMPREF9243_1155 HMPREF9243_1155 1188450 1189664 - bacterial capsule synthesis protein identified by match to protein family HMM PF09587 gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1155 HMPREF9243_1156 HMPREF9243_1156 HMPREF9243_1156 1189702 1192614 - SNF2 family N-terminal domain protein identified by match to protein family HMM PF00176%3B match to protein family HMM PF00271%3B match to protein family HMM PF08455 gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1156 HMPREF9243_1157 HMPREF9243_1157 HMPREF9243_1157 1192805 1193605 - integrase core domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00665 pseudogene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1157 HMPREF9243_1158 HMPREF9243_1158 HMPREF9243_1158 1193694 1194230 - transposase identified by match to protein family HMM PF01527 gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1158 HMPREF9243_1159 HMPREF9243_1159 HMPREF9243_1159 1194223 1194552 - SWIM zinc finger domain protein identified by match to protein family HMM PF04434 gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1159 HMPREF9243_1160 HMPREF9243_1160 HMPREF9243_1160 1194770 1196017 - acetyl-CoA C-acetyltransferase identified by match to protein family HMM PF00108%3B match to protein family HMM PF02803%3B match to protein family HMM TIGR01930 gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1160 HMPREF9243_1161 HMPREF9243_1161 HMPREF9243_1161 1196068 1197645 - CoA transferase identified by match to protein family HMM PF01144 gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1161 HMPREF9243_1162 HMPREF9243_1162 HMPREF9243_1162 1197696 1199036 - citrate transporter identified by match to protein family HMM PF03600 gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1162 HMPREF9243_1163 HMPREF9243_1163 fabG fabG 1199114 1199851 - 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659%3B match to protein family HMM TIGR01830 gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1163 HMPREF9243_1164 HMPREF9243_1164 HMPREF9243_1164 1200072 1200359 + transcriptional regulator%2C LysR family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00126 pseudogene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1164 HMPREF9243_1165 HMPREF9243_1165 HMPREF9243_1165 1200491 1201018 + transcriptional regulator%2C LysR family%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1165 HMPREF9243_1166 HMPREF9243_1166 HMPREF9243_1166 1201220 1201642 - integrase core domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00665 pseudogene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1166 HMPREF9243_1167 HMPREF9243_1167 HMPREF9243_1167 1201726 1202109 - transposase InsK for insertion sequence IS150 family protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1167 HMPREF9243_1168 HMPREF9243_1168 HMPREF9243_1168 1202109 1202660 - transposase identified by match to protein family HMM PF01527 gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1168 HMPREF9243_1169 HMPREF9243_1169 HMPREF9243_1169 1202749 1203537 - enoyl-CoA hydratase/isomerase family protein identified by match to protein family HMM PF00378 gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1169 HMPREF9243_1170 HMPREF9243_1170 HMPREF9243_1170 1203705 1204841 + aminotransferase%2C class V identified by match to protein family HMM PF00266 gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1170 HMPREF9243_1171 HMPREF9243_1171 azlD azlD 1205083 1205412 - branched-chain amino acid transport protein AzlD identified by match to protein family HMM PF05437 gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1171 HMPREF9243_1172 HMPREF9243_1172 HMPREF9243_1172 1205409 1206092 - putative azaleucine resistance protein AzlC identified by match to protein family HMM PF03591 gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1172 HMPREF9243_1173 HMPREF9243_1173 hpt hpt 1206283 1206819 - hypoxanthine phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01203 gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1173 HMPREF9243_1174 HMPREF9243_1174 thiW thiW 1206931 1207470 - protein ThiW identified by match to protein family HMM TIGR02359 gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1174 HMPREF9243_1176 HMPREF9243_1176 HMPREF9243_1176 1208056 1209105 - hypothetical protein gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1176 HMPREF9243_1177 HMPREF9243_1177 HMPREF9243_1177 1209711 1210367 - Acyltransferase identified by match to protein family HMM PF01553 gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1177 HMPREF9243_1178 HMPREF9243_1178 HMPREF9243_1178 1210466 1210684 - hypothetical protein identified by match to protein family HMM PF03672 gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1178 HMPREF9243_1179 HMPREF9243_1179 HMPREF9243_1179 1210778 1211725 - pseudouridine synthase%2C RluA family identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00005 gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1179 HMPREF9243_1180 HMPREF9243_1180 lspA lspA 1211730 1212179 - signal peptidase II identified by match to protein family HMM PF01252%3B match to protein family HMM TIGR00077 gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1180 HMPREF9243_1181 HMPREF9243_1181 rnhA rnhA 1212202 1212792 - ribonuclease HI identified by match to protein family HMM PF00075 gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1181 HMPREF9243_1182 HMPREF9243_1182 HMPREF9243_1182 1212868 1212938 - tRNA-Gly tRNA gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1182 HMPREF9243_1183 HMPREF9243_1183 HMPREF9243_1183 1213013 1215772 - putative ATP-dependent nuclease subunit A identified by match to protein family HMM PF00580 gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1183 HMPREF9243_1184 HMPREF9243_1184 HMPREF9243_1184 1215877 1216860 - conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1184 HMPREF9243_1185 HMPREF9243_1185 HMPREF9243_1185 1216863 1220471 - putative ATP-dependent nuclease subunit B gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1185 HMPREF9243_1186 HMPREF9243_1186 HMPREF9243_1186 1220495 1220887 - conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1186 HMPREF9243_1187 HMPREF9243_1187 HMPREF9243_1187 1220875 1221618 - dinuclear metal center protein%2C YbgI family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01784 pseudogene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1187 HMPREF9243_1188 HMPREF9243_1188 HMPREF9243_1188 1221608 1222033 - conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF04816 pseudogene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1188 HMPREF9243_1189 HMPREF9243_1189 HMPREF9243_1189 1222042 1222317 - conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1189 HMPREF9243_1190 HMPREF9243_1190 HMPREF9243_1190 1222317 1222847 - hypothetical protein gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1190 HMPREF9243_1191 HMPREF9243_1191 HMPREF9243_1191 1222955 1223266 + hypothetical protein identified by glimmer%3B putative gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1191 HMPREF9243_1192 HMPREF9243_1192 glgA glgA 1223330 1224772 - glycogen/starch synthase%2C ADP-glucose type identified by match to protein family HMM PF00534%3B match to protein family HMM PF08323%3B match to protein family HMM TIGR02095 gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1192 HMPREF9243_1193 HMPREF9243_1193 glgD glgD 1224816 1225970 - glucose-1-phosphate adenylyltransferase%2C GlgD subunit identified by match to protein family HMM TIGR02092 gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1193 HMPREF9243_1194 HMPREF9243_1194 glgC glgC 1225957 1227096 - glucose-1-phosphate adenylyltransferase identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR02091 gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1194 HMPREF9243_1195 HMPREF9243_1195 HMPREF9243_1195 1227188 1227739 - alpha amylase%2C C-terminal all-beta domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02806 pseudogene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1195 HMPREF9243_1196 HMPREF9243_1196 glgB glgB 1227745 1229157 - 1%2C4-alpha-glucan branching enzyme%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00128%3B match to protein family HMM PF02922%3B match to protein family HMM TIGR01515 pseudogene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1196 HMPREF9243_1197 HMPREF9243_1197 HMPREF9243_1197 1229408 1229788 - putative lactoylglutathione lyase identified by match to protein family HMM PF00903 gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1197 HMPREF9243_1198 HMPREF9243_1198 HMPREF9243_1198 1230102 1230186 - tRNA-Leu tRNA gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1198 HMPREF9243_1199 HMPREF9243_1199 HMPREF9243_1199 1230372 1231250 - EDD domain protein%2C DegV family identified by match to protein family HMM PF02645%3B match to protein family HMM TIGR00762 gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1199 HMPREF9243_1200 HMPREF9243_1200 HMPREF9243_1200 1231428 1232168 - hypothetical protein gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1200 HMPREF9243_1201 HMPREF9243_1201 HMPREF9243_1201 1232511 1232870 + hypothetical protein gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1201 HMPREF9243_1202 HMPREF9243_1202 HMPREF9243_1202 1232988 1233479 + transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1202 HMPREF9243_1203 HMPREF9243_1203 HMPREF9243_1203 1233433 1235160 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1203 HMPREF9243_1204 HMPREF9243_1204 HMPREF9243_1204 1235160 1236959 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1204 HMPREF9243_1205 HMPREF9243_1205 HMPREF9243_1205 1237020 1238060 - hypothetical protein gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1205 HMPREF9243_1206 HMPREF9243_1206 rpmA rpmA 1238135 1238416 - ribosomal protein L27 identified by match to protein family HMM PF01016%3B match to protein family HMM TIGR00062 gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1206 HMPREF9243_1207 HMPREF9243_1207 HMPREF9243_1207 1238435 1238770 - hypothetical protein identified by match to protein family HMM PF04327 gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1207 HMPREF9243_1208 HMPREF9243_1208 rplU rplU 1238773 1239081 - ribosomal protein L21 identified by match to protein family HMM PF00829%3B match to protein family HMM TIGR00061 gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1208 HMPREF9243_1210 HMPREF9243_1210 HMPREF9243_1210 1239325 1239561 - putative dihydroorotate oxidase%2C catalytic subunit%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1210 HMPREF9243_1211 HMPREF9243_1211 HMPREF9243_1211 1239603 1239731 - putative dihydroorotate oxidase%2C catalytic subunit%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1211 HMPREF9243_1212 HMPREF9243_1212 HMPREF9243_1212 1239755 1240234 - putative dihydroorotate oxidase%2C catalytic subunit%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01180 pseudogene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1212 HMPREF9243_1213 HMPREF9243_1213 pyrC pyrC 1240227 1241525 - dihydroorotase identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR00857 gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1213 HMPREF9243_1214 HMPREF9243_1214 pyrB pyrB 1241525 1242439 - aspartate carbamoyltransferase identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00670 gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1214 HMPREF9243_1215 HMPREF9243_1215 carB carB 1242488 1245634 - carbamoyl-phosphate synthase%2C large subunit%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00289%3B match to protein family HMM PF01071%3B match to protein family HMM PF02142%3B match to protein family HMM PF02222%3B match to protein family HMM PF02655%3B match to protein family HMM PF02786%3B match to protein family HMM PF02787%3B match to protein family HMM PF08443%3B match to protein family HMM TIGR01369 pseudogene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1215 HMPREF9243_1216 HMPREF9243_1216 carA carA 1245706 1246785 - carbamoyl-phosphate synthase%2C small subunit identified by match to protein family HMM PF00117%3B match to protein family HMM PF00988%3B match to protein family HMM TIGR01368 gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1216 HMPREF9243_1218 HMPREF9243_1218 HMPREF9243_1218 1247075 1247746 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1218 HMPREF9243_1219 HMPREF9243_1219 HMPREF9243_1219 1247774 1249267 - ABC transporter%2C permease protein identified by match to protein family HMM PF00497%3B match to protein family HMM PF00528%3B match to protein family HMM TIGR01726 gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1219 HMPREF9243_1221 HMPREF9243_1221 mreD mreD 1249608 1250129 - rod shape-determining protein MreD identified by match to protein family HMM TIGR03426 gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1221 HMPREF9243_1222 HMPREF9243_1222 mreC mreC 1250144 1250776 - rod shape-determining protein MreC%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF04085 pseudogene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1222 HMPREF9243_1223 HMPREF9243_1223 HMPREF9243_1223 1251331 1252065 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1223 HMPREF9243_1224 HMPREF9243_1224 HMPREF9243_1224 1252295 1253659 - amino acid kinase family identified by match to protein family HMM PF00696%3B match to protein family HMM PF01842%3B match to protein family HMM TIGR00657 gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1224 HMPREF9243_1225 HMPREF9243_1225 rpoD rpoD 1253843 1255048 - RNA polymerase sigma factor RpoD identified by match to protein family HMM PF00140%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02393%3B match to protein family HMM TIGR02937 gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1225 HMPREF9243_1226 HMPREF9243_1226 HMPREF9243_1226 1255049 1256089 - DNA primase domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1226 HMPREF9243_1227 HMPREF9243_1227 HMPREF9243_1227 1256140 1256910 - putative DNA primase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01807%3B match to protein family HMM PF08275 pseudogene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1227 HMPREF9243_1228 HMPREF9243_1228 ysxC ysxC 1257023 1257625 - ribosome biogenesis GTP-binding protein YsxC identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR03598 gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1228 HMPREF9243_1229 HMPREF9243_1229 clpX clpX 1257796 1259052 - ATP-dependent Clp protease%2C ATP-binding subunit ClpX identified by match to protein family HMM PF00004%3B match to protein family HMM PF06689%3B match to protein family HMM PF07724%3B match to protein family HMM TIGR00382 gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1229 HMPREF9243_1230 HMPREF9243_1230 tig tig 1259166 1260446 - trigger factor identified by match to protein family HMM PF00254%3B match to protein family HMM PF05697%3B match to protein family HMM PF05698%3B match to protein family HMM TIGR00115 gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1230 HMPREF9243_1231 HMPREF9243_1231 recU recU 1260748 1261356 + recombination protein U identified by match to protein family HMM PF03838%3B match to protein family HMM TIGR00648 gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1231 HMPREF9243_1232 HMPREF9243_1232 HMPREF9243_1232 1261364 1263832 + penicillin-binding protein%2C 1A family identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074 gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1232 HMPREF9243_1233 HMPREF9243_1233 HMPREF9243_1233 1264377 1265537 - hypothetical protein gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1233 HMPREF9243_1234 HMPREF9243_1234 HMPREF9243_1234 1265703 1266647 + hydrolase%2C alpha/beta domain protein gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1234 HMPREF9243_1235 HMPREF9243_1235 HMPREF9243_1235 1266677 1266889 + transcriptional regulator%2C BlaI/MecI/CopY family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF03965 pseudogene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1235 HMPREF9243_1236 HMPREF9243_1236 HMPREF9243_1236 1266910 1267110 + putative transcriptional repressor CopY%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1236 HMPREF9243_1237 HMPREF9243_1237 ung ung 1267116 1267790 - uracil-DNA glycosylase identified by match to protein family HMM PF03167%3B match to protein family HMM TIGR00628 gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1237 HMPREF9243_1238 HMPREF9243_1238 HMPREF9243_1238 1267898 1268806 + Cof-like hydrolase identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1238 HMPREF9243_1239 HMPREF9243_1239 HMPREF9243_1239 1268796 1269365 + low molecular weight phosphotyrosine protein phosphatase identified by match to protein family HMM PF01451 gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1239 HMPREF9243_1240 HMPREF9243_1240 HMPREF9243_1240 1269470 1270117 - HAD hydrolase%2C family IA%2C variant 3 identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549 gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1240 HMPREF9243_1241 HMPREF9243_1241 HMPREF9243_1241 1270309 1271937 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1241 HMPREF9243_1242 HMPREF9243_1242 HMPREF9243_1242 1272017 1272754 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1242 HMPREF9243_1243 HMPREF9243_1243 HMPREF9243_1243 1272767 1273456 - ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1243 HMPREF9243_1244 HMPREF9243_1244 HMPREF9243_1244 1273461 1274153 - ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726 gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1244 HMPREF9243_1245 HMPREF9243_1245 HMPREF9243_1245 1274312 1276162 - ABC transporter%2C substrate-binding protein%2C family 3 identified by match to protein family HMM PF00497 gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1245 HMPREF9243_1246 HMPREF9243_1246 HMPREF9243_1246 1276544 1276711 + hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative pseudogene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1246 HMPREF9243_1247 HMPREF9243_1247 HMPREF9243_1247 1276717 1278279 + ABC transporter%2C ATP-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 pseudogene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1247 HMPREF9243_1248 HMPREF9243_1248 HMPREF9243_1248 1278269 1280068 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1248 HMPREF9243_1249 HMPREF9243_1249 HMPREF9243_1249 1280182 1281348 - hypothetical protein identified by match to protein family HMM PF01594 gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1249 HMPREF9243_1250 HMPREF9243_1250 coaA coaA 1281361 1282293 - pantothenate kinase identified by match to protein family HMM PF00485%3B match to protein family HMM TIGR00554 gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1250 HMPREF9243_1251 HMPREF9243_1251 HMPREF9243_1251 1282306 1283064 - Acyl-ACP thioesterase identified by match to protein family HMM PF01643 gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1251 HMPREF9243_1252 HMPREF9243_1252 HMPREF9243_1252 1283267 1283560 + HesB-like protein identified by match to protein family HMM PF01521 gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1252 HMPREF9243_1253 HMPREF9243_1253 HMPREF9243_1253 1283581 1283847 + hypothetical protein gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1253 HMPREF9243_1254 HMPREF9243_1254 HMPREF9243_1254 1284060 1284917 + ABC1 family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF03109 pseudogene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1254 HMPREF9243_1255 HMPREF9243_1255 HMPREF9243_1255 1284920 1285654 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1255 HMPREF9243_1256 HMPREF9243_1256 HMPREF9243_1256 1285774 1286931 - hypothetical protein gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1256 HMPREF9243_1257 HMPREF9243_1257 HMPREF9243_1257 1287105 1287782 + channel protein%2C hemolysin III family identified by match to protein family HMM PF03006%3B match to protein family HMM TIGR01065 gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1257 HMPREF9243_1258 HMPREF9243_1258 HMPREF9243_1258 1287916 1288143 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF07288 pseudogene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1258 HMPREF9243_1259 HMPREF9243_1259 HMPREF9243_1259 1288133 1289806 + hypothetical protein rnjA gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1259 HMPREF9243_1260 HMPREF9243_1260 HMPREF9243_1260 1289881 1290066 - hypothetical protein identified by glimmer%3B putative gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1260 HMPREF9243_1261 HMPREF9243_1261 murA murA 1290063 1291376 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01072 gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1261 HMPREF9243_1262 HMPREF9243_1262 upp upp 1291431 1292072 - uracil phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01091 gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1262 HMPREF9243_1263 HMPREF9243_1263 glyA glyA 1292108 1293325 - glycine hydroxymethyltransferase identified by match to protein family HMM PF00464 gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1263 HMPREF9243_1264 HMPREF9243_1264 HMPREF9243_1264 1293474 1294433 - Sua5/YciO/YrdC/YwlC family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01300%3B match to protein family HMM PF03481%3B match to protein family HMM TIGR00057 pseudogene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1264 HMPREF9243_1265 HMPREF9243_1265 prmC prmC 1294435 1295154 - protein-(glutamine-N5) methyltransferase%2C release factor-specific identified by match to protein family HMM PF05175%3B match to protein family HMM PF08242%3B match to protein family HMM TIGR00536%3B match to protein family HMM TIGR03534 gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1265 HMPREF9243_1266 HMPREF9243_1266 prfA prfA 1295297 1296379 - peptide chain release factor 1 identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00019 gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1266 HMPREF9243_1267 HMPREF9243_1267 tdk tdk 1296395 1297015 - thymidine kinase identified by match to protein family HMM PF00265 gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1267 HMPREF9243_1268 HMPREF9243_1268 HMPREF9243_1268 1297171 1297818 - CobB/CobQ-like protein identified by match to protein family HMM PF07685 gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1268 HMPREF9243_1269 HMPREF9243_1269 HMPREF9243_1269 1297815 1299170 - Mur ligase middle domain protein identified by match to protein family HMM PF08245%3B match to protein family HMM PF08353 gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1269 HMPREF9243_1270 HMPREF9243_1270 HMPREF9243_1270 1299304 1300548 - putative ATP synthase F0%2C A subunit identified by match to protein family HMM PF01594 gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1270 HMPREF9243_1271 HMPREF9243_1271 HMPREF9243_1271 1300649 1301662 + hypothetical protein gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1271 HMPREF9243_1272 HMPREF9243_1272 uppP uppP 1301766 1302593 + undecaprenyl-diphosphatase UppP identified by match to protein family HMM PF02673%3B match to protein family HMM TIGR00753 gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1272 HMPREF9243_1273 HMPREF9243_1273 ald ald 1302810 1303913 - alanine dehydrogenase identified by match to protein family HMM PF01262%3B match to protein family HMM PF05222%3B match to protein family HMM TIGR00518 gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1273 HMPREF9243_1274 HMPREF9243_1274 HMPREF9243_1274 1304039 1305010 - diaminopimelate dehydrogenase identified by match to protein family HMM TIGR01921 gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1274 HMPREF9243_1275 HMPREF9243_1275 lysA lysA 1305041 1306357 - diaminopimelate decarboxylase identified by match to protein family HMM PF00278%3B match to protein family HMM PF02784%3B match to protein family HMM TIGR01048 gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1275 HMPREF9243_1276 HMPREF9243_1276 phoU phoU 1306709 1307380 + phosphate transport system regulatory protein PhoU identified by match to protein family HMM PF01895%3B match to protein family HMM TIGR02135 gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1276 HMPREF9243_1277 HMPREF9243_1277 HMPREF9243_1277 1307612 1308823 - transporter%2C major facilitator family protein identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690 gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1277 HMPREF9243_1278 HMPREF9243_1278 pyrE pyrE 1308893 1309528 - orotate phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR00336 gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1278 HMPREF9243_1279 HMPREF9243_1279 pyrF pyrF 1309529 1310224 - orotidine 5'-phosphate decarboxylase identified by match to protein family HMM PF00215%3B match to protein family HMM TIGR01740 gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1279 HMPREF9243_1281 HMPREF9243_1281 ssrA ssrA 1310603 1310960 - tmRNA gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1281 HMPREF9243_1282 HMPREF9243_1282 HMPREF9243_1282 1311072 1311887 - phosphoglycerate mutase family protein identified by match to protein family HMM PF00300 gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1282 HMPREF9243_1283 HMPREF9243_1283 HMPREF9243_1283 1311981 1312853 + transcriptional regulator%2C AraC family identified by match to protein family HMM PF00165 gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1283 HMPREF9243_1284 HMPREF9243_1284 smpB smpB 1313049 1313513 - SsrA-binding protein identified by match to protein family HMM PF01668%3B match to protein family HMM TIGR00086 gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1284 HMPREF9243_1285 HMPREF9243_1285 rnr rnr 1313535 1315859 - ribonuclease R identified by match to protein family HMM PF00575%3B match to protein family HMM PF00773%3B match to protein family HMM PF08206%3B match to protein family HMM TIGR00358%3B match to protein family HMM TIGR02063 gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1285 HMPREF9243_1286 HMPREF9243_1286 est est 1315867 1316616 - carboxylesterase gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1286 HMPREF9243_1287 HMPREF9243_1287 secG secG 1316691 1316921 - preprotein translocase%2C SecG subunit identified by match to protein family HMM PF03840%3B match to protein family HMM TIGR00810 gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1287 HMPREF9243_1288 HMPREF9243_1288 pdxB pdxB 1317024 1318208 - 4-phosphoerythronate dehydrogenase identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826 gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1288 HMPREF9243_1289 HMPREF9243_1289 serC serC 1318195 1319286 - phosphoserine transaminase identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR01364 gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1289 HMPREF9243_1290 HMPREF9243_1290 HMPREF9243_1290 1319405 1320034 - TIGR01906 family protein identified by match to protein family HMM PF07314%3B match to protein family HMM TIGR01906 gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1290 HMPREF9243_1291 HMPREF9243_1291 HMPREF9243_1291 1320007 1320831 - putative HAD hydrolase%2C TIGR01457 family identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01460 gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1291 HMPREF9243_1292 HMPREF9243_1292 HMPREF9243_1292 1320842 1321126 - tetratricopeptide repeat family protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1292 HMPREF9243_1293 HMPREF9243_1293 HMPREF9243_1293 1321135 1321431 - conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1293 HMPREF9243_1294 HMPREF9243_1294 eno eno 1321599 1322897 - phosphopyruvate hydratase identified by match to protein family HMM PF00113%3B match to protein family HMM PF03952%3B match to protein family HMM TIGR01060 gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1294 HMPREF9243_1295 HMPREF9243_1295 tpiA tpiA 1322947 1323702 - triose-phosphate isomerase identified by match to protein family HMM PF00121%3B match to protein family HMM TIGR00419 gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1295 HMPREF9243_1296 HMPREF9243_1296 pgk pgk 1323718 1324914 - phosphoglycerate kinase identified by match to protein family HMM PF00162 gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1296 HMPREF9243_1297 HMPREF9243_1297 gap gap 1325013 1326011 - glyceraldehyde-3-phosphate dehydrogenase%2C type I identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534 gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1297 HMPREF9243_1298 HMPREF9243_1298 HMPREF9243_1298 1326048 1327088 - putative sugar-binding domain protein identified by match to protein family HMM PF04198 gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1298 HMPREF9243_1299 HMPREF9243_1299 clpP clpP 1327331 1327933 - ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP identified by match to protein family HMM PF00574%3B match to protein family HMM TIGR00493 gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1299 HMPREF9243_1300 HMPREF9243_1300 HMPREF9243_1300 1328212 1328283 + tRNA-Arg tRNA gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1300 HMPREF9243_1301 HMPREF9243_1301 HMPREF9243_1301 1328673 1328990 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1301 HMPREF9243_1302 HMPREF9243_1302 HMPREF9243_1302 1328990 1329814 + transposase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01610 pseudogene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1302 HMPREF9243_1303 HMPREF9243_1303 HMPREF9243_1303 1329855 1329998 + conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1303 HMPREF9243_1304 HMPREF9243_1304 HMPREF9243_1304 1330205 1331026 - NLPA lipoprotein identified by match to protein family HMM PF03180 gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1304 HMPREF9243_1305 HMPREF9243_1305 HMPREF9243_1305 1331335 1331514 + hypothetical protein gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1305 HMPREF9243_1306 HMPREF9243_1306 HMPREF9243_1306 1331571 1331876 - putative transposase InsK for insertion sequence IS150%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1306 HMPREF9243_1307 HMPREF9243_1307 HMPREF9243_1307 1331900 1332406 - transposase InsK for insertion sequence IS150 family protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1307 HMPREF9243_1308 HMPREF9243_1308 HMPREF9243_1308 1332406 1332957 - transposase identified by match to protein family HMM PF01527 gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1308 HMPREF9243_1309 HMPREF9243_1309 HMPREF9243_1309 1333016 1335010 - phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 identified by match to protein family HMM PF00359%3B match to protein family HMM PF02378%3B match to protein family HMM PF02379%3B match to protein family HMM TIGR00829%3B match to protein family HMM TIGR00848%3B match to protein family HMM TIGR01427 gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1309 HMPREF9243_1310 HMPREF9243_1310 pfkB pfkB 1335029 1335949 - 1-phosphofructokinase identified by match to protein family HMM PF00294%3B match to protein family HMM TIGR03168%3B match to protein family HMM TIGR03828 gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1310 HMPREF9243_1311 HMPREF9243_1311 HMPREF9243_1311 1335946 1336686 - transcriptional regulator%2C DeoR family identified by match to protein family HMM PF00455%3B match to protein family HMM PF08220%3B match to protein family HMM PF08279 gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1311 HMPREF9243_1312 HMPREF9243_1312 HMPREF9243_1312 1336909 1336980 - tRNA-Glu tRNA gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1312 HMPREF9243_1313 HMPREF9243_1313 HMPREF9243_1313 1336997 1337069 - tRNA-Phe tRNA gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1313 HMPREF9243_1314 HMPREF9243_1314 HMPREF9243_1314 1337082 1337154 - tRNA-Asp tRNA gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1314 HMPREF9243_1315 HMPREF9243_1315 HMPREF9243_1315 1337177 1337249 - tRNA-Met tRNA gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1315 HMPREF9243_1316 HMPREF9243_1316 HMPREF9243_1316 1337291 1337362 - tRNA-Glu tRNA gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1316 HMPREF9243_1317 HMPREF9243_1317 HMPREF9243_1317 1337372 1337459 - tRNA-Ser tRNA gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1317 HMPREF9243_1318 HMPREF9243_1318 HMPREF9243_1318 1337472 1337545 - tRNA-Ile tRNA gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1318 HMPREF9243_1319 HMPREF9243_1319 HMPREF9243_1319 1337556 1337626 - tRNA-Gly tRNA gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1319 HMPREF9243_1320 HMPREF9243_1320 HMPREF9243_1320 1337630 1337702 - tRNA-Asp tRNA gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1320 HMPREF9243_1321 HMPREF9243_1321 HMPREF9243_1321 1337720 1337792 - tRNA-Met tRNA gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1321 HMPREF9243_1322 HMPREF9243_1322 HMPREF9243_1322 1337804 1337893 - tRNA-Ser tRNA gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1322 HMPREF9243_1323 HMPREF9243_1323 HMPREF9243_1323 1337912 1337985 - tRNA-Met tRNA gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1323 HMPREF9243_1324 HMPREF9243_1324 HMPREF9243_1324 1337995 1338068 - tRNA-Met tRNA gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1324 HMPREF9243_1325 HMPREF9243_1325 HMPREF9243_1325 1338083 1338155 - tRNA-Ala tRNA gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1325 HMPREF9243_1326 HMPREF9243_1326 HMPREF9243_1326 1338161 1338234 - tRNA-Pro tRNA gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1326 HMPREF9243_1327 HMPREF9243_1327 HMPREF9243_1327 1338239 1338312 - tRNA-Arg tRNA gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1327 HMPREF9243_1328 HMPREF9243_1328 HMPREF9243_1328 1338331 1338416 - tRNA-Leu tRNA gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1328 HMPREF9243_1329 HMPREF9243_1329 HMPREF9243_1329 1338449 1338520 - tRNA-Gly tRNA gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1329 HMPREF9243_1330 HMPREF9243_1330 HMPREF9243_1330 1338532 1338604 - tRNA-Thr tRNA gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1330 HMPREF9243_1331 HMPREF9243_1331 HMPREF9243_1331 1338613 1338697 - tRNA-Leu tRNA gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1331 HMPREF9243_1332 HMPREF9243_1332 HMPREF9243_1332 1338705 1338777 - tRNA-Lys tRNA gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1332 HMPREF9243_1333 HMPREF9243_1333 HMPREF9243_1333 1338782 1338854 - tRNA-Val tRNA gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1333 HMPREF9243_1334 HMPREF9243_1334 rrfD rrfD 1338865 1338980 - 5S ribosomal RNA rRNA gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1334 HMPREF9243_1335 HMPREF9243_1335 rr1D rr1D 1339062 1341962 - 23S ribosomal RNA rRNA gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1335 HMPREF9243_1336 HMPREF9243_1336 HMPREF9243_1336 1342129 1342201 - tRNA-Ala tRNA gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1336 HMPREF9243_1337 HMPREF9243_1337 HMPREF9243_1337 1342236 1342309 - tRNA-Ile tRNA gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1337 HMPREF9243_1338 HMPREF9243_1338 pgi pgi 1344427 1345776 - glucose-6-phosphate isomerase identified by match to protein family HMM PF00342 gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1338 HMPREF9243_1339 HMPREF9243_1339 HMPREF9243_1339 1345779 1346189 - general stress protein 13 identified by match to protein family HMM PF00575 gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1339 HMPREF9243_1340 HMPREF9243_1340 HMPREF9243_1340 1346189 1346782 - peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type identified by match to protein family HMM PF00160 gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1340 HMPREF9243_1341 HMPREF9243_1341 HMPREF9243_1341 1346937 1347434 + divergent PAP2 family identified by match to protein family HMM PF02681 gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1341 HMPREF9243_1342 HMPREF9243_1342 HMPREF9243_1342 1347439 1348443 + pyridine nucleotide-disulfide oxidoreductase identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992 gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1342 HMPREF9243_1343 HMPREF9243_1343 HMPREF9243_1343 1348511 1349182 - DnaD domain protein identified by match to protein family HMM PF04271%3B match to protein family HMM TIGR01446 gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1343 HMPREF9243_1344 HMPREF9243_1344 HMPREF9243_1344 1349202 1350383 - aminotransferase%2C class I/II identified by match to protein family HMM PF00155 gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1344 HMPREF9243_1345 HMPREF9243_1345 HMPREF9243_1345 1350397 1350600 - conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1345 HMPREF9243_1346 HMPREF9243_1346 HMPREF9243_1346 1350701 1350871 - hypothetical protein identified by glimmer%3B putative gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1346 HMPREF9243_1347 HMPREF9243_1347 HMPREF9243_1347 1350883 1353555 - putative DnaQ family exonuclease/DinG family helicase identified by match to protein family HMM PF00929%3B match to protein family HMM TIGR00573 gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1347 HMPREF9243_1348 HMPREF9243_1348 HMPREF9243_1348 1353583 1353984 - conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1348 HMPREF9243_1349 HMPREF9243_1349 HMPREF9243_1349 1353960 1354820 - tRNA nucleotidyltransferase/poly(A) polymerase family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01743 pseudogene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1349 HMPREF9243_1350 HMPREF9243_1350 dapB dapB 1354817 1355599 - dihydrodipicolinate reductase identified by match to protein family HMM PF01113%3B match to protein family HMM PF03447%3B match to protein family HMM PF05173%3B match to protein family HMM TIGR00036 gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1350 HMPREF9243_1351 HMPREF9243_1351 HMPREF9243_1351 1355652 1356941 - tetratricopeptide repeat protein identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719 gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1351 HMPREF9243_1352 HMPREF9243_1352 hup hup 1357057 1357335 - DNA-binding protein HU identified by match to protein family HMM PF00216 gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1352 HMPREF9243_1353 HMPREF9243_1353 der der 1357460 1358770 - ribosome biogenesis GTPase Der identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR03594 gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1353 HMPREF9243_1354 HMPREF9243_1354 rpsA rpsA 1358861 1360183 - 30S ribosomal protein S1 identified by match to protein family HMM PF00575 gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1354 HMPREF9243_1355 HMPREF9243_1355 cmk cmk 1360316 1360924 - cytidylate kinase identified by match to protein family HMM PF02224%3B match to protein family HMM TIGR00017 gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1355 HMPREF9243_1356 HMPREF9243_1356 HMPREF9243_1356 1361021 1361749 - LysM domain protein identified by match to protein family HMM PF01476 gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1356 HMPREF9243_1357 HMPREF9243_1357 HMPREF9243_1357 1361828 1363306 - ATP-dependent DNA helicase%2C RecQ family identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM TIGR00614 gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1357 HMPREF9243_1358 HMPREF9243_1358 HMPREF9243_1358 1363300 1364304 - hypothetical protein gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1358 HMPREF9243_1359 HMPREF9243_1359 HMPREF9243_1359 1364738 1365262 + M protein trans-acting positive regulator (MGA)%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF05043 pseudogene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1359 HMPREF9243_1360 HMPREF9243_1360 HMPREF9243_1360 1365331 1366269 + hypothetical protein identified by glimmer%3B putative gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1360 HMPREF9243_1361 HMPREF9243_1361 HMPREF9243_1361 1366419 1367009 - hypothetical protein gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1361 HMPREF9243_1363 HMPREF9243_1363 rluB rluB 1367292 1368014 - pseudouridine synthase B%2C ribosomal large subunit identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093 gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1363 HMPREF9243_1364 HMPREF9243_1364 scpB scpB 1368014 1368574 - segregation and condensation protein B identified by match to protein family HMM PF04079%3B match to protein family HMM TIGR00281 gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1364 HMPREF9243_1365 HMPREF9243_1365 HMPREF9243_1365 1368571 1368684 - hypothetical protein identified by glimmer%3B putative gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1365 HMPREF9243_1366 HMPREF9243_1366 HMPREF9243_1366 1368711 1369340 - ScpA/B protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02616 pseudogene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1366 HMPREF9243_1367 HMPREF9243_1367 HMPREF9243_1367 1369337 1369702 - hypothetical protein gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1367 HMPREF9243_1368 HMPREF9243_1368 HMPREF9243_1368 1369869 1370600 - transcriptional regulator%2C Sir2 family identified by match to protein family HMM PF02146 gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1368 HMPREF9243_1369 HMPREF9243_1369 HMPREF9243_1369 1370735 1371541 + hypothetical protein gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1369 HMPREF9243_1370 HMPREF9243_1370 xerD xerD 1371677 1372576 - tyrosine recombinase XerD identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899%3B match to protein family HMM TIGR02225 gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1370 HMPREF9243_1371 HMPREF9243_1371 HMPREF9243_1371 1372581 1373450 - hypothetical protein gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1371 HMPREF9243_1372 HMPREF9243_1372 pyk pyk 1373585 1375372 - pyruvate kinase identified by match to protein family HMM PF00224%3B match to protein family HMM PF00391%3B match to protein family HMM PF02887%3B match to protein family HMM TIGR01064 gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1372 HMPREF9243_1373 HMPREF9243_1373 pfkA pfkA 1375393 1376379 - 6-phosphofructokinase identified by match to protein family HMM PF00365%3B match to protein family HMM TIGR02482 gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1373 HMPREF9243_1374 HMPREF9243_1374 HMPREF9243_1374 1376469 1379843 - DNA polymerase III%2C alpha subunit identified by match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00594 gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1374 HMPREF9243_1375 HMPREF9243_1375 queA queA 1379940 1380989 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02547%3B match to protein family HMM TIGR00113 pseudogene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1375 HMPREF9243_1376 HMPREF9243_1376 ruvB ruvB 1380964 1382001 - Holliday junction DNA helicase RuvB identified by match to protein family HMM PF00004%3B match to protein family HMM PF01078%3B match to protein family HMM PF05491%3B match to protein family HMM PF05496%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00635 gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1376 HMPREF9243_1377 HMPREF9243_1377 ruvA ruvA 1382021 1382632 - Holliday junction DNA helicase RuvA identified by match to protein family HMM PF01330%3B match to protein family HMM TIGR00084 gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1377 HMPREF9243_1378 HMPREF9243_1378 msrB msrB 1382642 1383079 - methionine-R-sulfoxide reductase identified by match to protein family HMM PF01641%3B match to protein family HMM TIGR00357 gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1378 HMPREF9243_1379 HMPREF9243_1379 mutL mutL 1383142 1385040 - DNA mismatch repair domain protein identified by match to protein family HMM PF01119%3B match to protein family HMM PF02518%3B match to protein family HMM PF08676%3B match to protein family HMM TIGR00585 gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1379 HMPREF9243_1380 HMPREF9243_1380 mutS mutS 1385042 1387609 - DNA mismatch repair protein MutS identified by match to protein family HMM PF00488%3B match to protein family HMM PF01624%3B match to protein family HMM PF05188%3B match to protein family HMM PF05190%3B match to protein family HMM PF05192%3B match to protein family HMM TIGR01070 gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1380 HMPREF9243_1381 HMPREF9243_1381 HMPREF9243_1381 1387757 1388383 + phosphoglycerate mutase family protein identified by match to protein family HMM PF00300 gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1381 HMPREF9243_1382 HMPREF9243_1382 HMPREF9243_1382 1388415 1388502 + tRNA-Ser tRNA gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1382 HMPREF9243_1383 HMPREF9243_1383 HMPREF9243_1383 1388763 1390043 + transposase identified by match to protein family HMM PF01610 gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1383 HMPREF9243_1384 HMPREF9243_1384 HMPREF9243_1384 1390669 1390902 - LPXTG-motif cell wall anchor domain protein identified by match to protein family HMM TIGR01167 gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1384 HMPREF9243_1385 HMPREF9243_1385 HMPREF9243_1385 1390889 1391050 - hypothetical protein identified by glimmer%3B putative gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1385 HMPREF9243_1386 HMPREF9243_1386 HMPREF9243_1386 1391202 1392773 - YmdA/YtgF family protein identified by match to protein family HMM PF00013%3B match to protein family HMM PF01966%3B match to protein family HMM PF08668%3B match to protein family HMM TIGR00277%3B match to protein family HMM TIGR03319 gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1386 HMPREF9243_1387 HMPREF9243_1387 recA recA 1393058 1394173 - RecA protein identified by match to protein family HMM PF00154%3B match to protein family HMM TIGR02012 gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1387 HMPREF9243_1388 HMPREF9243_1388 HMPREF9243_1388 1394255 1395493 - competence/damage-inducible domain protein CinA identified by match to protein family HMM PF00994%3B match to protein family HMM PF02464%3B match to protein family HMM TIGR00199%3B match to protein family HMM TIGR00200 gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1388 HMPREF9243_1389 HMPREF9243_1389 pgsA pgsA 1395545 1396123 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase identified by match to protein family HMM PF01066%3B match to protein family HMM TIGR00560 gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1389 HMPREF9243_1390 HMPREF9243_1390 spoIIIE spoIIIE 1396369 1398585 - stage III sporulation protein E%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01580%3B match to protein family HMM PF09397 pseudogene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1390 HMPREF9243_1391 HMPREF9243_1391 HMPREF9243_1391 1398877 1399155 + acylphosphatase identified by match to protein family HMM PF00708 gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1391 HMPREF9243_1392 HMPREF9243_1392 HMPREF9243_1392 1399219 1400145 + membrane protein insertase%2C YidC/Oxa1 family identified by match to protein family HMM PF02096%3B match to protein family HMM TIGR03592 gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1392 HMPREF9243_1393 HMPREF9243_1393 HMPREF9243_1393 1400235 1400942 - response regulator receiver domain protein identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1393 HMPREF9243_1394 HMPREF9243_1394 gnd gnd 1400969 1402408 - phosphogluconate dehydrogenase (decarboxylating) identified by match to protein family HMM PF00393%3B match to protein family HMM PF03446%3B match to protein family HMM TIGR00873 gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1394 HMPREF9243_1395 HMPREF9243_1395 HMPREF9243_1395 1402639 1402812 + hypothetical protein identified by glimmer%3B putative gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1395 HMPREF9243_1396 HMPREF9243_1396 thiI thiI 1402899 1404122 - thiamine biosynthesis/tRNA modification protein ThiI identified by match to protein family HMM PF02568%3B match to protein family HMM PF02926%3B match to protein family HMM PF06508%3B match to protein family HMM TIGR00342 gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1396 HMPREF9243_1397 HMPREF9243_1397 HMPREF9243_1397 1404131 1405285 - aminotransferase%2C class V identified by match to protein family HMM PF00266%3B match to protein family HMM PF01212 gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1397 HMPREF9243_1398 HMPREF9243_1398 ezrA ezrA 1405433 1407154 - septation ring formation regulator EzrA identified by match to protein family HMM PF06160 gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1398 HMPREF9243_1399 HMPREF9243_1399 rpsD rpsD 1407341 1407952 - ribosomal protein S4 identified by match to protein family HMM PF00163%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR01017 gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1399 HMPREF9243_1400 HMPREF9243_1400 mtnN mtnN 1408203 1408898 - MTA/SAH nucleosidase identified by match to protein family HMM PF01048%3B match to protein family HMM TIGR01704 gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1400 HMPREF9243_1401 HMPREF9243_1401 HMPREF9243_1401 1408908 1409303 - hypothetical protein identified by glimmer%3B putative gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1401 HMPREF9243_1402 HMPREF9243_1402 HMPREF9243_1402 1409309 1409860 - hydrolase%2C NUDIX family identified by match to protein family HMM PF00293 gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1402 HMPREF9243_1403 HMPREF9243_1403 HMPREF9243_1403 1410024 1410269 + transglycosylase associated protein identified by match to protein family HMM PF04226 gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1403 HMPREF9243_1404 HMPREF9243_1404 HMPREF9243_1404 1410488 1411378 - integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1404 HMPREF9243_1405 HMPREF9243_1405 HMPREF9243_1405 1411378 1411929 - transposase identified by match to protein family HMM PF01527 gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1405 HMPREF9243_1406 HMPREF9243_1406 noxE noxE 1412011 1413354 - NADH oxidase identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992 gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1406 HMPREF9243_1407 HMPREF9243_1407 HMPREF9243_1407 1413625 1413828 - cold-shock DNA-binding domain protein identified by match to protein family HMM PF00313 gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1407 HMPREF9243_1408 HMPREF9243_1408 ileS ileS 1413831 1416614 - isoleucine--tRNA ligase identified by match to protein family HMM PF00133%3B match to protein family HMM PF06827%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00392 gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1408 HMPREF9243_1410 HMPREF9243_1410 HMPREF9243_1410 1416934 1417626 - DivIVA domain protein identified by match to protein family HMM PF05103%3B match to protein family HMM TIGR03544 gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1410 HMPREF9243_1411 HMPREF9243_1411 HMPREF9243_1411 1417640 1418425 - S4 domain protein identified by match to protein family HMM PF01479 gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1411 HMPREF9243_1412 HMPREF9243_1412 HMPREF9243_1412 1418443 1418685 - YGGT family protein identified by match to protein family HMM PF02325 gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1412 HMPREF9243_1413 HMPREF9243_1413 HMPREF9243_1413 1418706 1419374 - pyridoxal phosphate enzyme%2C YggS family identified by match to protein family HMM TIGR00044 gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1413 HMPREF9243_1414 HMPREF9243_1414 ftsZ ftsZ 1419379 1420668 - cell division protein FtsZ identified by match to protein family HMM PF00091%3B match to protein family HMM PF03953%3B match to protein family HMM TIGR00065 gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1414 HMPREF9243_1415 HMPREF9243_1415 ftsA ftsA 1420702 1422084 - cell division protein FtsA identified by match to protein family HMM PF02491%3B match to protein family HMM TIGR01174 gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1415 HMPREF9243_1416 HMPREF9243_1416 HMPREF9243_1416 1422294 1423562 - cell division protein FtsQ identified by match to protein family HMM PF03799%3B match to protein family HMM PF08478 gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1416 HMPREF9243_1417 HMPREF9243_1417 murG murG 1423574 1424668 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase identified by match to protein family HMM PF03033%3B match to protein family HMM PF04101%3B match to protein family HMM TIGR01133 gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1417 HMPREF9243_1418 HMPREF9243_1418 murD murD 1424683 1426071 - UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01087 gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1418 HMPREF9243_1419 HMPREF9243_1419 mraY mraY 1426081 1427028 - phospho-N-acetylmuramoyl-pentapeptide-transferase identified by match to protein family HMM PF00953%3B match to protein family HMM TIGR00445 gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1419 HMPREF9243_1420 HMPREF9243_1420 HMPREF9243_1420 1427049 1429205 - penicillin-binding protein%2C transpeptidase domain protein identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM PF03793 gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1420 HMPREF9243_1421 HMPREF9243_1421 ftsL ftsL 1429189 1429599 - cell division protein FtsL identified by match to protein family HMM PF04977%3B match to protein family HMM TIGR02209 gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1421 HMPREF9243_1422 HMPREF9243_1422 mraW mraW 1429619 1430575 - S-adenosyl-methyltransferase MraW identified by match to protein family HMM PF01795%3B match to protein family HMM TIGR00006 gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1422 HMPREF9243_1423 HMPREF9243_1423 HMPREF9243_1423 1430591 1430746 - putative protein MraZ%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1423 HMPREF9243_1424 HMPREF9243_1424 HMPREF9243_1424 1430785 1431021 - protein MraZ%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02381 pseudogene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1424 HMPREF9243_1425 HMPREF9243_1425 HMPREF9243_1425 1431236 1431607 - hypothetical protein gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1425 HMPREF9243_1426 HMPREF9243_1426 rpmF rpmF 1431849 1432043 - ribosomal protein L32 identified by match to protein family HMM PF01783%3B match to protein family HMM TIGR01031 gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1426 HMPREF9243_1427 HMPREF9243_1427 HMPREF9243_1427 1432067 1432618 - putative ACR%2C COG1399 identified by match to protein family HMM PF02620 gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1427 HMPREF9243_1428 HMPREF9243_1428 HMPREF9243_1428 1432727 1433941 - hypothetical protein identified by match to protein family HMM PF05636 gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1428 HMPREF9243_1429 HMPREF9243_1429 HMPREF9243_1429 1433992 1434750 - methyltransferase domain protein identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1429 HMPREF9243_1430 HMPREF9243_1430 HMPREF9243_1430 1434740 1435117 - iojap-like protein identified by match to protein family HMM PF02410%3B match to protein family HMM TIGR00090 gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1430 HMPREF9243_1431 HMPREF9243_1431 HMPREF9243_1431 1435114 1435725 - hydrolase%2C HD family identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR00488 gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1431 HMPREF9243_1432 HMPREF9243_1432 nadD nadD 1435718 1436362 - nicotinate-nucleotide adenylyltransferase identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR00482 gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1432 HMPREF9243_1433 HMPREF9243_1433 HMPREF9243_1433 1436366 1436689 - putative RNA-binding protein%2C YhbY family identified by match to protein family HMM PF01985 gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1433 HMPREF9243_1434 HMPREF9243_1434 yqeH yqeH 1436698 1437810 - ribosome biogenesis GTPase YqeH identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03597 gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1434 HMPREF9243_1435 HMPREF9243_1435 yqeG yqeG 1437803 1438333 - HAD phosphatase%2C family IIIA identified by match to protein family HMM PF09419%3B match to protein family HMM TIGR01662%3B match to protein family HMM TIGR01668 gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1435 HMPREF9243_1436 HMPREF9243_1436 thrB thrB 1438459 1439358 - homoserine kinase identified by match to protein family HMM PF00288%3B match to protein family HMM PF08544%3B match to protein family HMM TIGR00191 gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1436 HMPREF9243_1437 HMPREF9243_1437 HMPREF9243_1437 1439362 1440642 - homoserine dehydrogenase identified by match to protein family HMM PF00742%3B match to protein family HMM PF03447 gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1437 HMPREF9243_1438 HMPREF9243_1438 murE murE 1440660 1442174 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01085 gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1438 HMPREF9243_1439 HMPREF9243_1439 HMPREF9243_1439 1442297 1442524 - hypothetical protein identified by match to protein family HMM PF08796 gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1439 HMPREF9243_1440 HMPREF9243_1440 HMPREF9243_1440 1442589 1443797 - glycosyltransferase%2C group 1 family protein identified by match to protein family HMM PF00534 gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1440 HMPREF9243_1441 HMPREF9243_1441 ptsP ptsP 1443964 1445688 - phosphoenolpyruvate-protein phosphotransferase identified by match to protein family HMM PF00391%3B match to protein family HMM PF02896%3B match to protein family HMM PF05524%3B match to protein family HMM TIGR01417 gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1441 HMPREF9243_1442 HMPREF9243_1442 ptsH ptsH 1445690 1445956 - phosphocarrier protein HPr identified by match to protein family HMM PF00381%3B match to protein family HMM TIGR01003 gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1442 HMPREF9243_1443 HMPREF9243_1443 HMPREF9243_1443 1446247 1448436 + ATPase family associated with various cellular activities (AAA) identified by match to protein family HMM PF00004%3B match to protein family HMM PF02151%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728 gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1443 HMPREF9243_1444 HMPREF9243_1444 HMPREF9243_1444 1448709 1449929 + transposase%2C IS116/IS110/IS902 family identified by match to protein family HMM PF02371 gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1444 HMPREF9243_1445 HMPREF9243_1445 guaB guaB 1450427 1451908 - inosine-5'-monophosphate dehydrogenase identified by match to protein family HMM PF00478%3B match to protein family HMM PF00571%3B match to protein family HMM TIGR01302 gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1445 HMPREF9243_1446 HMPREF9243_1446 prfC prfC 1452185 1453588 - peptide chain release factor 3 identified by match to protein family HMM PF00009%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00503 gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1446 HMPREF9243_1447 HMPREF9243_1447 HMPREF9243_1447 1453896 1454639 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1447 HMPREF9243_1448 HMPREF9243_1448 HMPREF9243_1448 1454629 1456275 - ABC transporter%2C permease protein identified by match to protein family HMM PF00497%3B match to protein family HMM PF00528%3B match to protein family HMM TIGR01726 gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1448 HMPREF9243_1449 HMPREF9243_1449 HMPREF9243_1449 1456477 1457115 - V-type ATPase%2C D subunit identified by match to protein family HMM PF01813%3B match to protein family HMM TIGR00309 gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1449 HMPREF9243_1450 HMPREF9243_1450 HMPREF9243_1450 1457136 1458575 - ATP synthase ab domain protein identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM PF09378%3B overlaps another CDS with the same product name gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1450 HMPREF9243_1451 HMPREF9243_1451 HMPREF9243_1451 1458575 1460356 - ATP synthase ab domain protein identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B overlaps another CDS with the same product name gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1451 HMPREF9243_1452 HMPREF9243_1452 HMPREF9243_1452 1460375 1460686 - ATP synthase%2C subunit F identified by match to protein family HMM PF01990 gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1452 HMPREF9243_1453 HMPREF9243_1453 HMPREF9243_1453 1460676 1461698 - ATP synthase%2C subunit C identified by match to protein family HMM PF01992 gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1453 HMPREF9243_1454 HMPREF9243_1454 HMPREF9243_1454 1461715 1462296 - putative ATP synthase%2C subunit E identified by match to protein family HMM PF01991 gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1454 HMPREF9243_1455 HMPREF9243_1455 ntpK ntpK 1462318 1462797 - V-type sodium ATPase%2C K subunit identified by match to protein family HMM PF00137 gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1455 HMPREF9243_1456 HMPREF9243_1456 HMPREF9243_1456 1462813 1464786 - V-type sodium ATPase%2C I subunit identified by match to protein family HMM PF01496 gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1456 HMPREF9243_1457 HMPREF9243_1457 HMPREF9243_1457 1464773 1465099 - hypothetical protein gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1457 HMPREF9243_1458 HMPREF9243_1458 HMPREF9243_1458 1465401 1465838 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1458 HMPREF9243_1459 HMPREF9243_1459 HMPREF9243_1459 1465311 1465424 - hypothetical protein identified by glimmer%3B putative gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1459 HMPREF9243_1460 HMPREF9243_1460 metA metA 1465844 1466770 - homoserine O-succinyltransferase identified by match to protein family HMM PF04204%3B match to protein family HMM TIGR01001 gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1460 HMPREF9243_1462 HMPREF9243_1462 mgtE mgtE 1467105 1468514 - magnesium transporter identified by match to protein family HMM PF00571%3B match to protein family HMM PF01769%3B match to protein family HMM PF03448%3B match to protein family HMM TIGR00400 gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1462 HMPREF9243_1463 HMPREF9243_1463 HMPREF9243_1463 1468515 1469417 - pseudouridine synthase%2C RluA family identified by match to protein family HMM PF00849%3B match to protein family HMM TIGR00005 gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1463 HMPREF9243_1464 HMPREF9243_1464 HMPREF9243_1464 1469428 1470246 - NAD(+)/NADH kinase identified by match to protein family HMM PF01513 gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1464 HMPREF9243_1465 HMPREF9243_1465 HMPREF9243_1465 1470475 1471071 + adenylate cyclase identified by match to protein family HMM PF01928 gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1465 HMPREF9243_1466 HMPREF9243_1466 HMPREF9243_1466 1471111 1471764 + hypothetical protein gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1466 HMPREF9243_1467 HMPREF9243_1467 HMPREF9243_1467 1471907 1472953 - competence protein CoiA-like protein identified by match to protein family HMM PF06054 gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1467 HMPREF9243_1468 HMPREF9243_1468 HMPREF9243_1468 1473027 1473158 - tryptophan--tRNA ligase domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1468 HMPREF9243_1469 HMPREF9243_1469 trpS trpS 1473341 1474015 - tryptophan--tRNA ligase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00579%3B match to protein family HMM TIGR00233 pseudogene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1469 HMPREF9243_1470 HMPREF9243_1470 spxA spxA 1474385 1474780 + transcriptional regulator Spx identified by match to protein family HMM PF00462%3B match to protein family HMM PF03960%3B match to protein family HMM TIGR01617 gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1470 HMPREF9243_1471 HMPREF9243_1471 HMPREF9243_1471 1474943 1475590 + negative regulator of genetic competence (MecA) identified by match to protein family HMM PF05389 gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1471 HMPREF9243_1472 HMPREF9243_1472 HMPREF9243_1472 1475605 1476129 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1472 HMPREF9243_1473 HMPREF9243_1473 HMPREF9243_1473 1476301 1477176 - NLPA lipoprotein identified by match to protein family HMM PF03180 gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1473 HMPREF9243_1474 HMPREF9243_1474 HMPREF9243_1474 1477203 1477880 - ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1474 HMPREF9243_1475 HMPREF9243_1475 HMPREF9243_1475 1477883 1478938 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF09383 gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1475 HMPREF9243_1476 HMPREF9243_1476 HMPREF9243_1476 1479147 1479617 + ferritin-like protein identified by match to protein family HMM PF00210 gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1476 HMPREF9243_1477 HMPREF9243_1477 rplT rplT 1479676 1480035 - ribosomal protein L20 identified by match to protein family HMM PF00453%3B match to protein family HMM TIGR01032 gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1477 HMPREF9243_1478 HMPREF9243_1478 infC infC 1480310 1480645 - translation initiation factor IF-3 identified by match to protein family HMM PF00707%3B match to protein family HMM TIGR00168 gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1478 HMPREF9243_1480 HMPREF9243_1480 HMPREF9243_1480 1481067 1482275 - amidohydrolase identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891 gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1480 HMPREF9243_1481 HMPREF9243_1481 HMPREF9243_1481 1482304 1482768 - macro domain protein identified by match to protein family HMM PF01661 gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1481 HMPREF9243_1482 HMPREF9243_1482 HMPREF9243_1482 1482770 1483150 - GtrA-like protein identified by match to protein family HMM PF04138 gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1482 HMPREF9243_1483 HMPREF9243_1483 thrS thrS 1483273 1485228 - threonine--tRNA ligase identified by match to protein family HMM PF00587%3B match to protein family HMM PF02824%3B match to protein family HMM PF03129%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00418 gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1483 HMPREF9243_1485 HMPREF9243_1485 HMPREF9243_1485 1485531 1486460 - primosomal protein DnaI identified by match to protein family HMM PF07319 gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1485 HMPREF9243_1486 HMPREF9243_1486 HMPREF9243_1486 1486457 1486711 - hypothetical protein identified by glimmer%3B putative gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1486 HMPREF9243_1487 HMPREF9243_1487 HMPREF9243_1487 1486672 1487859 - replication initiation and membrane attachment protein%2C DnaB/DnaD family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF07261 pseudogene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1487 HMPREF9243_1488 HMPREF9243_1488 nrdR nrdR 1487856 1488386 - transcriptional regulator NrdR identified by match to protein family HMM PF03477 gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1488 HMPREF9243_1489 HMPREF9243_1489 coaE coaE 1488478 1489086 - dephospho-CoA kinase identified by match to protein family HMM PF01121%3B match to protein family HMM TIGR00152 gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1489 HMPREF9243_1490 HMPREF9243_1490 HMPREF9243_1490 1489100 1489690 - putative DNA-formamidopyrimidine glycosylase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF06827%3B match to protein family HMM PF06831 pseudogene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1490 HMPREF9243_1491 HMPREF9243_1491 HMPREF9243_1491 1489645 1489911 - DNA-formamidopyrimidine glycosylase domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1491 HMPREF9243_1492 HMPREF9243_1492 polA polA 1490219 1492885 - DNA-directed DNA polymerase identified by match to protein family HMM PF00476%3B match to protein family HMM PF01367%3B match to protein family HMM PF02739%3B match to protein family HMM TIGR00593 gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1492 HMPREF9243_1493 HMPREF9243_1493 HMPREF9243_1493 1492935 1493321 - conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1493 HMPREF9243_1494 HMPREF9243_1494 HMPREF9243_1494 1493502 1495223 - gametolysin identified by match to protein family HMM PF01476%3B match to protein family HMM PF01832 gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1494 HMPREF9243_1495 HMPREF9243_1495 HMPREF9243_1495 1495394 1495960 + putative rRNA methylase identified by match to protein family HMM PF06962 gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1495 HMPREF9243_1496 HMPREF9243_1496 HMPREF9243_1496 1495962 1496750 + hypothetical protein gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1496 HMPREF9243_1497 HMPREF9243_1497 radC radC 1496722 1496952 - DNA repair protein RadC%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF04002 pseudogene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1497 HMPREF9243_1498 HMPREF9243_1498 HMPREF9243_1498 1497006 1497347 - putative DNA repair protein RadC%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1498 HMPREF9243_1499 HMPREF9243_1499 glmS glmS 1497553 1499361 - glutamine-fructose-6-phosphate transaminase (isomerizing) identified by match to protein family HMM PF00310%3B match to protein family HMM PF01380%3B match to protein family HMM TIGR01135 gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1499 HMPREF9243_1500 HMPREF9243_1500 HMPREF9243_1500 1499418 1499574 - gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1500 HMPREF9243_1501 HMPREF9243_1501 valS valS 1499910 1502555 - valine--tRNA ligase identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00422 gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1501 HMPREF9243_1502 HMPREF9243_1502 HMPREF9243_1502 1502858 1503484 - DNA-3-methyladenine glycosylase identified by match to protein family HMM PF02245%3B match to protein family HMM TIGR00567 gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1502 HMPREF9243_1503 HMPREF9243_1503 HMPREF9243_1503 1503484 1503906 - rhodanese-like protein identified by match to protein family HMM PF00581 gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1503 HMPREF9243_1504 HMPREF9243_1504 HMPREF9243_1504 1503910 1504875 - ROK family protein identified by match to protein family HMM PF00480%3B match to protein family HMM TIGR00744 gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1504 HMPREF9243_1505 HMPREF9243_1505 HMPREF9243_1505 1504885 1505550 - peptidase%2C S54 family identified by match to protein family HMM PF01694 gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1505 HMPREF9243_1506 HMPREF9243_1506 rpmG rpmG 1505695 1505850 - ribosomal protein L33 identified by match to protein family HMM PF00471%3B match to protein family HMM TIGR01023 gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1506 HMPREF9243_1507 HMPREF9243_1507 HMPREF9243_1507 1505955 1508078 - penicillin-binding protein%2C transpeptidase domain protein identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717 gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1507 HMPREF9243_1508 HMPREF9243_1508 HMPREF9243_1508 1508253 1510946 + bacterial membrane protein YfhO identified by match to protein family HMM PF09586 gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1508 HMPREF9243_1509 HMPREF9243_1509 HMPREF9243_1509 1511009 1511683 - methyltransferase domain protein identified by match to protein family HMM PF01170%3B match to protein family HMM PF02353%3B match to protein family HMM PF03848%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1509 HMPREF9243_1510 HMPREF9243_1510 HMPREF9243_1510 1511870 1512295 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1510 HMPREF9243_1511 HMPREF9243_1511 HMPREF9243_1511 1512247 1512771 + hypothetical protein identified by glimmer%3B putative gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1511 HMPREF9243_1512 HMPREF9243_1512 HMPREF9243_1512 1512799 1514148 - DEAD/DEAH box helicase identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271 gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1512 HMPREF9243_1513 HMPREF9243_1513 zwf zwf 1514333 1515790 + glucose-6-phosphate dehydrogenase identified by match to protein family HMM PF00479%3B match to protein family HMM PF02781%3B match to protein family HMM TIGR00871 gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1513 HMPREF9243_1514 HMPREF9243_1514 HMPREF9243_1514 1516060 1517025 - DHHA1 domain protein identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272 gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1514 HMPREF9243_1515 HMPREF9243_1515 HMPREF9243_1515 1517054 1518367 - DRTGG domain protein identified by match to protein family HMM PF00571%3B match to protein family HMM PF07085 gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1515 HMPREF9243_1516 HMPREF9243_1516 dinB dinB 1518387 1519505 - DNA polymerase IV identified by match to protein family HMM PF00817 gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1516 HMPREF9243_1517 HMPREF9243_1517 HMPREF9243_1517 1519626 1519919 - hypothetical protein gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1517 HMPREF9243_1518 HMPREF9243_1518 yajC yajC 1519922 1520305 - preprotein translocase%2C YajC subunit identified by match to protein family HMM PF02699%3B match to protein family HMM TIGR00739 gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1518 HMPREF9243_1519 HMPREF9243_1519 HMPREF9243_1519 1520344 1520802 - tRNA-guanine transglycosylase identified by match to protein family HMM PF01702%3B match to protein family HMM TIGR00449 gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1519 HMPREF9243_1520 HMPREF9243_1520 HMPREF9243_1520 1521055 1521945 - integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1520 HMPREF9243_1521 HMPREF9243_1521 HMPREF9243_1521 1521945 1522496 - transposase identified by match to protein family HMM PF01527 gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1521 HMPREF9243_1522 HMPREF9243_1522 HMPREF9243_1522 1522508 1523140 - putative tRNA-guanine transglycosylase identified by match to protein family HMM PF01702%3B match to protein family HMM TIGR00449 gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1522 HMPREF9243_1523 HMPREF9243_1523 clpB clpB 1523326 1525944 - ATP-dependent chaperone protein ClpB identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR03346 gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1523 HMPREF9243_1524 HMPREF9243_1524 HMPREF9243_1524 1526124 1528748 - ATPase family associated with various cellular activities (AAA) identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728 gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1524 HMPREF9243_1525 HMPREF9243_1525 HMPREF9243_1525 1528848 1530065 - branched-chain alpha-keto acid dehydrogenase subunit E2 identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817 gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1525 HMPREF9243_1526 HMPREF9243_1526 HMPREF9243_1526 1530080 1531111 - Transketolase%2C pyridine binding domain protein identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780 gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1526 HMPREF9243_1527 HMPREF9243_1527 HMPREF9243_1527 1531145 1532218 - dehydrogenase E1 component identified by match to protein family HMM PF00676 gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1527 HMPREF9243_1528 HMPREF9243_1528 HMPREF9243_1528 1532252 1533598 - pyridine nucleotide-disulfide oxidoreductase identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992 gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1528 HMPREF9243_1529 HMPREF9243_1529 HMPREF9243_1529 1533808 1534686 - LysR substrate binding domain protein identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1529 HMPREF9243_1530 HMPREF9243_1530 HMPREF9243_1530 1534881 1535417 - hypothetical protein identified by glimmer%3B putative gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1530 HMPREF9243_1531 HMPREF9243_1531 HMPREF9243_1531 1535573 1536025 - MaoC-like protein identified by match to protein family HMM PF01575 gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1531 HMPREF9243_1532 HMPREF9243_1532 rplS rplS 1536097 1536459 - ribosomal protein L19 identified by match to protein family HMM PF01245%3B match to protein family HMM TIGR01024 gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1532 HMPREF9243_1533 HMPREF9243_1533 trmD trmD 1536578 1537336 - tRNA (guanine-N(1)-)-methyltransferase identified by match to protein family HMM PF01746%3B match to protein family HMM TIGR00088 gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1533 HMPREF9243_1534 HMPREF9243_1534 rimM rimM 1537326 1537865 - 16S rRNA processing protein RimM identified by match to protein family HMM PF01782%3B match to protein family HMM PF05239%3B match to protein family HMM TIGR02273 gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1534 HMPREF9243_1535 HMPREF9243_1535 HMPREF9243_1535 1537956 1538210 - KH domain protein gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1535 HMPREF9243_1536 HMPREF9243_1536 rpsP rpsP 1538226 1538498 - ribosomal protein S16 identified by match to protein family HMM PF00886%3B match to protein family HMM TIGR00002 gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1536 HMPREF9243_1537 HMPREF9243_1537 HMPREF9243_1537 1538644 1539207 - hypothetical protein gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1537 HMPREF9243_1538 HMPREF9243_1538 HMPREF9243_1538 1539210 1539767 - conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1538 HMPREF9243_1539 HMPREF9243_1539 HMPREF9243_1539 1539914 1540189 - conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1539 HMPREF9243_1540 HMPREF9243_1540 HMPREF9243_1540 1540246 1540848 - nodulation efficiency protein D identified by match to protein family HMM PF01957 gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1540 HMPREF9243_1541 HMPREF9243_1541 HMPREF9243_1541 1541064 1542821 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1541 HMPREF9243_1542 HMPREF9243_1542 HMPREF9243_1542 1542814 1544529 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1542 HMPREF9243_1543 HMPREF9243_1543 HMPREF9243_1543 1544771 1546021 - FemAB family protein identified by match to protein family HMM PF02388 gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1543 HMPREF9243_1544 HMPREF9243_1544 ffh ffh 1546046 1547521 - signal recognition particle protein identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM PF02978%3B match to protein family HMM TIGR00959 gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1544 HMPREF9243_1545 HMPREF9243_1545 HMPREF9243_1545 1547525 1547872 - helix-turn-helix protein%2C YlxM/p13 family identified by match to protein family HMM PF04297%3B match to protein family HMM PF08281 gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1545 HMPREF9243_1546 HMPREF9243_1546 ftsY ftsY 1548021 1549046 - signal recognition particle-docking protein FtsY identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM TIGR00064 gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1546 HMPREF9243_1547 HMPREF9243_1547 HMPREF9243_1547 1549061 1549873 - Cof-like hydrolase identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1547 HMPREF9243_1548 HMPREF9243_1548 smc smc 1550355 1553915 - chromosome segregation protein SMC identified by match to protein family HMM PF02463%3B match to protein family HMM PF06470%3B match to protein family HMM TIGR02168 gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1548 HMPREF9243_1549 HMPREF9243_1549 HMPREF9243_1549 1553930 1554367 - ribonuclease III%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00035%3B match to protein family HMM PF00636 pseudogene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1549 HMPREF9243_1550 HMPREF9243_1550 HMPREF9243_1550 1554646 1554891 - putative acyl carrier protein identified by match to protein family HMM PF00550 gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1550 HMPREF9243_1551 HMPREF9243_1551 plsX plsX 1554931 1555950 - fatty acid/phospholipid synthesis protein PlsX identified by match to protein family HMM PF02504%3B match to protein family HMM TIGR00182 gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1551 HMPREF9243_1552 HMPREF9243_1552 recG recG 1555974 1558013 - ATP-dependent DNA helicase RecG identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00643 gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1552 HMPREF9243_1553 HMPREF9243_1553 HMPREF9243_1553 1558041 1559054 - luciferase family oxidoreductase%2C FMN-dependent%2C PP_0088 family identified by match to protein family HMM PF00296 gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1553 HMPREF9243_1554 HMPREF9243_1554 HMPREF9243_1554 1559110 1560777 - DAK2 domain fusion protein YloV identified by match to protein family HMM PF02734%3B match to protein family HMM TIGR03599 gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1554 HMPREF9243_1555 HMPREF9243_1555 HMPREF9243_1555 1560799 1561161 - hypothetical protein identified by match to protein family HMM PF03780 gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1555 HMPREF9243_1556 HMPREF9243_1556 HMPREF9243_1556 1561654 1562325 - thiamine diphosphokinase identified by match to protein family HMM PF04263%3B match to protein family HMM TIGR01378 gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1556 HMPREF9243_1557 HMPREF9243_1557 rpe rpe 1562341 1562988 - ribulose-phosphate 3-epimerase identified by match to protein family HMM PF00834%3B match to protein family HMM TIGR01163 gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1557 HMPREF9243_1558 HMPREF9243_1558 rsgA rsgA 1562985 1563917 - ribosome small subunit-dependent GTPase A identified by match to protein family HMM PF03193%3B match to protein family HMM TIGR00157 gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1558 HMPREF9243_1559 HMPREF9243_1559 HMPREF9243_1559 1563910 1565961 - kinase domain protein identified by match to protein family HMM PF00069%3B match to protein family HMM PF01163%3B match to protein family HMM PF03793 gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1559 HMPREF9243_1560 HMPREF9243_1560 HMPREF9243_1560 1565958 1566701 - protein phosphatase 2C identified by match to protein family HMM PF00481 gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1560 HMPREF9243_1561 HMPREF9243_1561 sun sun 1566713 1568125 - ribosomal RNA small subunit methyltransferase B identified by match to protein family HMM PF01029%3B match to protein family HMM PF01189%3B match to protein family HMM TIGR00563 gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1561 HMPREF9243_1562 HMPREF9243_1562 fmt fmt 1568082 1569038 - methionyl-tRNA formyltransferase identified by match to protein family HMM PF00551%3B match to protein family HMM PF02911%3B match to protein family HMM TIGR00460 gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1562 HMPREF9243_1563 HMPREF9243_1563 HMPREF9243_1563 1571471 1571584 + hypothetical protein identified by glimmer%3B putative gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1563 HMPREF9243_1564 HMPREF9243_1564 priA priA 1569082 1571514 - primosomal protein N' identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00595 gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1564 HMPREF9243_1565 HMPREF9243_1565 rpoZ rpoZ 1571639 1571863 - DNA-directed RNA polymerase%2C omega subunit identified by match to protein family HMM PF01192%3B match to protein family HMM TIGR00690 gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1565 HMPREF9243_1566 HMPREF9243_1566 HMPREF9243_1566 1571866 1572294 - putative guanylate kinase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00625 pseudogene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1566 HMPREF9243_1567 HMPREF9243_1567 HMPREF9243_1567 1572339 1572491 - conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1567 HMPREF9243_1568 HMPREF9243_1568 HMPREF9243_1568 1572839 1573219 + hypothetical protein identified by glimmer%3B putative gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1568 HMPREF9243_1569 HMPREF9243_1569 HMPREF9243_1569 1573447 1574982 - phospholipase D domain protein identified by match to protein family HMM PF00614 gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1569 HMPREF9243_1570 HMPREF9243_1570 HMPREF9243_1570 1575061 1575666 - thiamine transporter protein (Thia_YuaJ) gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1570 HMPREF9243_1571 HMPREF9243_1571 HMPREF9243_1571 1575686 1577488 - hypothetical protein identified by match to protein family HMM PF00753 gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1571 HMPREF9243_1572 HMPREF9243_1572 asd asd 1577585 1578628 - aspartate-semialdehyde dehydrogenase identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01296 gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1572 HMPREF9243_1573 HMPREF9243_1573 pnp pnp 1578891 1581011 - polyribonucleotide nucleotidyltransferase identified by match to protein family HMM PF00013%3B match to protein family HMM PF00575%3B match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM PF03726%3B match to protein family HMM TIGR03591 gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1573 HMPREF9243_1574 HMPREF9243_1574 rpsO rpsO 1581185 1581454 - ribosomal protein S15 identified by match to protein family HMM PF00312%3B match to protein family HMM TIGR00952 gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1574 HMPREF9243_1575 HMPREF9243_1575 HMPREF9243_1575 1581679 1582566 + PAP2 family protein identified by match to protein family HMM PF01569 gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1575 HMPREF9243_1576 HMPREF9243_1576 uvrB uvrB 1582696 1584690 - excinuclease ABC%2C B subunit identified by match to protein family HMM PF00271%3B match to protein family HMM PF02151%3B match to protein family HMM TIGR00631 gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1576 HMPREF9243_1577 HMPREF9243_1577 rpsT rpsT 1584872 1585126 + ribosomal protein S20 identified by match to protein family HMM PF01649%3B match to protein family HMM TIGR00029 gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1577 HMPREF9243_1578 HMPREF9243_1578 holA holA 1585206 1585979 - DNA polymerase III%2C delta subunit%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF06144%3B match to protein family HMM TIGR01128 pseudogene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1578 HMPREF9243_1579 HMPREF9243_1579 HMPREF9243_1579 1585976 1586224 - DNA polymerase III%2C delta subunit domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1579 HMPREF9243_1580 HMPREF9243_1580 HMPREF9243_1580 1586286 1588610 - DNA internalization competence protein ComEC/Rec2-like protein identified by match to protein family HMM PF00753%3B match to protein family HMM PF03772%3B match to protein family HMM TIGR00360%3B match to protein family HMM TIGR00361 gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1580 HMPREF9243_1581 HMPREF9243_1581 HMPREF9243_1581 1588612 1589358 - comEA protein identified by match to protein family HMM PF00633%3B match to protein family HMM TIGR00426 gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1581 HMPREF9243_1582 HMPREF9243_1582 HMPREF9243_1582 1589452 1590012 - RNA methyltransferase%2C RsmD family identified by match to protein family HMM PF03602%3B match to protein family HMM TIGR00095 gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1582 HMPREF9243_1583 HMPREF9243_1583 HMPREF9243_1583 1590218 1591072 - LPXTG-motif cell wall anchor domain protein identified by match to protein family HMM TIGR01167 gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1583 HMPREF9243_1584 HMPREF9243_1584 HMPREF9243_1584 1591579 1592697 - LPXTG-motif cell wall anchor domain protein identified by match to protein family HMM PF00746%3B match to protein family HMM TIGR01167 gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1584 HMPREF9243_1585 HMPREF9243_1585 HMPREF9243_1585 1593154 1593462 - hypothetical protein gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1585 HMPREF9243_1586 HMPREF9243_1586 pyc pyc 1593498 1596932 - pyruvate carboxylase identified by match to protein family HMM PF00289%3B match to protein family HMM PF00364%3B match to protein family HMM PF00682%3B match to protein family HMM PF02222%3B match to protein family HMM PF02436%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786%3B match to protein family HMM TIGR01235 gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1586 HMPREF9243_1587 HMPREF9243_1587 HMPREF9243_1587 1597009 1598133 - cell cycle protein%2C FtsW/RodA/SpoVE family identified by match to protein family HMM PF01098 gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1587 HMPREF9243_1588 HMPREF9243_1588 HMPREF9243_1588 1598163 1598288 - hypothetical protein identified by glimmer%3B putative gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1588 HMPREF9243_1589 HMPREF9243_1589 typA typA 1598449 1600287 - GTP-binding protein TypA identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF01926%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01394 gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1589 HMPREF9243_1590 HMPREF9243_1590 HMPREF9243_1590 1600489 1601283 - inositol monophosphatase family protein identified by match to protein family HMM PF00459 gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1590 HMPREF9243_1591 HMPREF9243_1591 HMPREF9243_1591 1601366 1601638 - hypothetical protein identified by match to protein family HMM PF05256 gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1591 HMPREF9243_1592 HMPREF9243_1592 HMPREF9243_1592 1601799 1602530 + pseudouridylate synthase identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093 gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1592 HMPREF9243_1593 HMPREF9243_1593 HMPREF9243_1593 1602629 1603276 - ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726 gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1593 HMPREF9243_1594 HMPREF9243_1594 HMPREF9243_1594 1603288 1603929 - ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726 gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1594 HMPREF9243_1595 HMPREF9243_1595 glnH glnH 1603931 1604773 - ABC transporter glutamine-binding protein GlnH identified by match to protein family HMM PF00497 gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1595 HMPREF9243_1596 HMPREF9243_1596 glnQ glnQ 1604788 1605522 - glutamine ABC transporter%2C ATP-binding protein GlnQ identified by match to protein family HMM PF00005 gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1596 HMPREF9243_1597 HMPREF9243_1597 HMPREF9243_1597 1605800 1606225 - hypothetical protein gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1597 HMPREF9243_1598 HMPREF9243_1598 HMPREF9243_1598 1606376 1606927 + transposase identified by match to protein family HMM PF01527 gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1598 HMPREF9243_1599 HMPREF9243_1599 HMPREF9243_1599 1606927 1607817 + integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1599 HMPREF9243_1600 HMPREF9243_1600 lpdA lpdA 1608025 1609434 - dihydrolipoyl dehydrogenase identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01350 gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1600 HMPREF9243_1601 HMPREF9243_1601 HMPREF9243_1601 1609450 1611075 - dihydrolipoamide acetyltransferase identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817 gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1601 HMPREF9243_1602 HMPREF9243_1602 HMPREF9243_1602 1611128 1612114 - Transketolase%2C pyridine binding domain protein identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780 gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1602 HMPREF9243_1603 HMPREF9243_1603 pdhA pdhA 1612117 1613220 - pyruvate dehydrogenase E1 component%2C alpha subunit identified by match to protein family HMM PF00676%3B match to protein family HMM TIGR03181 gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1603 HMPREF9243_1604 HMPREF9243_1604 def def 1613662 1614240 + peptide deformylase identified by match to protein family HMM PF01327%3B match to protein family HMM TIGR00079 gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1604 HMPREF9243_1605 HMPREF9243_1605 coaBC coaBC 1614310 1615548 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase identified by match to protein family HMM PF02441%3B match to protein family HMM PF04127%3B match to protein family HMM TIGR00521 gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1605 HMPREF9243_1606 HMPREF9243_1606 thrC thrC 1615558 1617033 - threonine synthase identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00260 gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1606 HMPREF9243_1607 HMPREF9243_1607 HMPREF9243_1607 1617319 1617951 + ribosomal protein L25%2C Ctc-form identified by match to protein family HMM TIGR00731 gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1607 HMPREF9243_1608 HMPREF9243_1608 HMPREF9243_1608 1618012 1619001 - hypothetical protein identified by match to protein family HMM PF03601 gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1608 HMPREF9243_1609 HMPREF9243_1609 HMPREF9243_1609 1619140 1621029 - hypothetical protein gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1609 HMPREF9243_1610 HMPREF9243_1610 HMPREF9243_1610 1621032 1621340 - putative thioredoxin identified by match to protein family HMM PF00085 gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1610 HMPREF9243_1611 HMPREF9243_1611 HMPREF9243_1611 1621409 1622107 - cyclic nucleotide-binding domain protein identified by match to protein family HMM PF00027 gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1611 HMPREF9243_1612 HMPREF9243_1612 HMPREF9243_1612 1622192 1623448 - transporter%2C CPA2 family identified by match to protein family HMM PF00999 gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1612 HMPREF9243_1613 HMPREF9243_1613 HMPREF9243_1613 1623707 1624273 - putative proton-coupled thiamine transporter YuaJ identified by match to protein family HMM PF09515%3B match to protein family HMM TIGR02357 gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1613 HMPREF9243_1615 HMPREF9243_1615 HMPREF9243_1615 1625113 1625940 + putative esterase identified by match to protein family HMM PF00756 gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1615 HMPREF9243_1616 HMPREF9243_1616 HMPREF9243_1616 1626046 1626369 + hypothetical protein identified by glimmer%3B putative gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1616 HMPREF9243_1617 HMPREF9243_1617 HMPREF9243_1617 1626502 1627812 + hydroxymethylglutaryl-CoA reductase%2C degradative identified by match to protein family HMM TIGR00532 gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1617 HMPREF9243_1618 HMPREF9243_1618 HMPREF9243_1618 1627972 1629135 - hydroxymethylglutaryl-CoA synthase identified by match to protein family HMM PF01154%3B match to protein family HMM PF08540%3B match to protein family HMM TIGR01835 gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1618 HMPREF9243_1619 HMPREF9243_1619 HMPREF9243_1619 1629591 1630520 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352 gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1619 HMPREF9243_1620 HMPREF9243_1620 HMPREF9243_1620 1630513 1631634 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727 gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1620 HMPREF9243_1621 HMPREF9243_1621 HMPREF9243_1621 1631646 1632683 - ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1621 HMPREF9243_1622 HMPREF9243_1622 HMPREF9243_1622 1632686 1633630 - ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1622 HMPREF9243_1623 HMPREF9243_1623 HMPREF9243_1623 1633634 1634083 + hypothetical protein gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1623 HMPREF9243_1624 HMPREF9243_1624 HMPREF9243_1624 1634301 1634783 - conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1624 HMPREF9243_1625 HMPREF9243_1625 HMPREF9243_1625 1634780 1635928 - ABC transporter%2C substrate-binding protein%2C family 5%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00496 pseudogene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1625 HMPREF9243_1626 HMPREF9243_1626 HMPREF9243_1626 1636142 1637770 - ABC transporter%2C substrate-binding protein%2C family 5 identified by match to protein family HMM PF00496 gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1626 HMPREF9243_1627 HMPREF9243_1627 HMPREF9243_1627 1638022 1639653 - ABC transporter%2C substrate-binding protein%2C family 5 identified by match to protein family HMM PF00496 gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1627 HMPREF9243_1628 HMPREF9243_1628 HMPREF9243_1628 1639938 1641308 - dipeptidase PepV identified by match to protein family HMM PF01546%3B match to protein family HMM TIGR01887 gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1628 HMPREF9243_1629 HMPREF9243_1629 HMPREF9243_1629 1641520 1642632 + Creatinase identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321 gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1629 HMPREF9243_1630 HMPREF9243_1630 HMPREF9243_1630 1642904 1643251 - hypothetical protein identified by glimmer%3B putative gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1630 HMPREF9243_1631 HMPREF9243_1631 metK metK 1643459 1644670 + methionine adenosyltransferase identified by match to protein family HMM PF00438%3B match to protein family HMM PF02772%3B match to protein family HMM PF02773%3B match to protein family HMM TIGR01034 gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1631 HMPREF9243_1632 HMPREF9243_1632 HMPREF9243_1632 1644765 1645232 - low molecular weight phosphotyrosine protein phosphatase identified by match to protein family HMM PF01451 gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1632 HMPREF9243_1633 HMPREF9243_1633 alr alr 1645328 1646485 + alanine racemase identified by match to protein family HMM PF00842%3B match to protein family HMM PF01168%3B match to protein family HMM TIGR00492 gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1633 HMPREF9243_1634 HMPREF9243_1634 HMPREF9243_1634 1647012 1647467 + dihydrodipicolinate synthetase family identified by match to protein family HMM PF00701 gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1634 HMPREF9243_1635 HMPREF9243_1635 HMPREF9243_1635 1647597 1648427 + transcriptional regulator%2C AraC family identified by match to protein family HMM PF00165 gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1635 HMPREF9243_1636 HMPREF9243_1636 HMPREF9243_1636 1648563 1649621 - tetratricopeptide repeat protein identified by match to protein family HMM PF07719 gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1636 HMPREF9243_1637 HMPREF9243_1637 HMPREF9243_1637 1649727 1650275 - hypothetical protein identified by glimmer%3B putative gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1637 HMPREF9243_1638 HMPREF9243_1638 HMPREF9243_1638 1650508 1651686 + hypothetical protein gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1638 HMPREF9243_1639 HMPREF9243_1639 HMPREF9243_1639 1651676 1652617 - serine-type D-Ala-D-Ala carboxypeptidase identified by match to protein family HMM PF02557 gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1639 HMPREF9243_1640 HMPREF9243_1640 proB proB 1652738 1653550 + glutamate 5-kinase identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR01027 gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1640 HMPREF9243_1641 HMPREF9243_1641 proA proA 1653575 1654831 + glutamate-5-semialdehyde dehydrogenase identified by match to protein family HMM PF00171%3B match to protein family HMM TIGR00407 gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1641 HMPREF9243_1642 HMPREF9243_1642 HMPREF9243_1642 1655086 1655553 - hypothetical protein identified by glimmer%3B putative gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1642 HMPREF9243_1643 HMPREF9243_1643 HMPREF9243_1643 1655555 1655716 - hypothetical protein identified by glimmer%3B putative gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1643 HMPREF9243_1644 HMPREF9243_1644 HMPREF9243_1644 1655746 1656501 - capsular exopolysaccharide family identified by match to protein family HMM TIGR01007 gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1644 HMPREF9243_1645 HMPREF9243_1645 HMPREF9243_1645 1656520 1657224 - chain length determinant protein identified by match to protein family HMM PF02706 gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1645 HMPREF9243_1646 HMPREF9243_1646 HMPREF9243_1646 1657326 1658075 - hypothetical protein gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1646 HMPREF9243_1647 HMPREF9243_1647 mutX mutX 1658091 1658552 - mutator MutT protein identified by match to protein family HMM PF00293 gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1647 HMPREF9243_1648 HMPREF9243_1648 HMPREF9243_1648 1658727 1659611 - EDD domain protein%2C DegV family identified by match to protein family HMM PF02645%3B match to protein family HMM TIGR00762 gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1648 HMPREF9243_1649 HMPREF9243_1649 HMPREF9243_1649 1659645 1660526 - EDD domain protein%2C DegV family identified by match to protein family HMM PF02645%3B match to protein family HMM TIGR00762 gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1649 HMPREF9243_1650 HMPREF9243_1650 guaC guaC 1660710 1661678 - GMP reductase identified by match to protein family HMM PF00478%3B match to protein family HMM TIGR01306 gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1650 HMPREF9243_1651 HMPREF9243_1651 coaD coaD 1661848 1662351 - pantetheine-phosphate adenylyltransferase identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR01510 gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1651 HMPREF9243_1652 HMPREF9243_1652 HMPREF9243_1652 1662395 1663852 - cell envelope-like function transcriptional attenuator common domain protein identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350 gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1652 HMPREF9243_1653 HMPREF9243_1653 map map 1663872 1664687 - methionine aminopeptidase%2C type I identified by match to protein family HMM PF00557%3B match to protein family HMM TIGR00500 gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1653 HMPREF9243_1654 HMPREF9243_1654 HMPREF9243_1654 1664953 1665660 + transcriptional regulator%2C GntR family identified by match to protein family HMM PF00392 gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1654 HMPREF9243_1655 HMPREF9243_1655 HMPREF9243_1655 1665802 1666251 + flavodoxin identified by match to protein family HMM PF00258 gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1655 HMPREF9243_1656 HMPREF9243_1656 HMPREF9243_1656 1666314 1666601 + hypothetical protein identified by glimmer%3B putative gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1656 HMPREF9243_1657 HMPREF9243_1657 HMPREF9243_1657 1666721 1668385 + ABC transporter%2C substrate-binding protein%2C family 5 identified by match to protein family HMM PF00496 gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1657 HMPREF9243_1658 HMPREF9243_1658 HMPREF9243_1658 1668564 1669916 + polysaccharide deacetylase identified by match to protein family HMM PF01522 gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1658 HMPREF9243_1659 HMPREF9243_1659 HMPREF9243_1659 1670011 1671096 - glycosyltransferase%2C group 2 family protein identified by match to protein family HMM PF00535 gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1659 HMPREF9243_1660 HMPREF9243_1660 HMPREF9243_1660 1671159 1671231 - tRNA-Arg tRNA gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1660 HMPREF9243_1661 HMPREF9243_1661 HMPREF9243_1661 1671269 1672228 - glycosyltransferase%2C group 2 family protein identified by match to protein family HMM PF00535 gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1661 HMPREF9243_1662 HMPREF9243_1662 HMPREF9243_1662 1672236 1673051 - glycosyltransferase%2C group 2 family protein identified by match to protein family HMM PF00535 gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1662 HMPREF9243_1663 HMPREF9243_1663 HMPREF9243_1663 1673067 1674023 - glycosyltransferase%2C group 2 family protein identified by match to protein family HMM PF00535 gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1663 HMPREF9243_1664 HMPREF9243_1664 HMPREF9243_1664 1674140 1675903 - hypothetical protein gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1664 HMPREF9243_1665 HMPREF9243_1665 HMPREF9243_1665 1675977 1677041 - SAF domain protein identified by match to protein family HMM PF03102%3B match to protein family HMM PF08666 gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1665 HMPREF9243_1666 HMPREF9243_1666 HMPREF9243_1666 1677052 1677762 - conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1666 HMPREF9243_1667 HMPREF9243_1667 HMPREF9243_1667 1677879 1678685 - cytidylyltransferase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02348 pseudogene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1667 HMPREF9243_1668 HMPREF9243_1668 HMPREF9243_1668 1678785 1679606 - conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1668 HMPREF9243_1669 HMPREF9243_1669 HMPREF9243_1669 1679648 1679899 - conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1669 HMPREF9243_1670 HMPREF9243_1670 HMPREF9243_1670 1679935 1680540 - conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1670 HMPREF9243_1671 HMPREF9243_1671 HMPREF9243_1671 1680638 1681966 - polysaccharide deacetylase identified by match to protein family HMM PF01522 gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1671 HMPREF9243_1672 HMPREF9243_1672 HMPREF9243_1672 1682056 1683606 - hypothetical protein gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1672 HMPREF9243_1673 HMPREF9243_1673 HMPREF9243_1673 1683590 1684711 - hypothetical protein identified by glimmer%3B putative gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1673 HMPREF9243_1674 HMPREF9243_1674 HMPREF9243_1674 1684716 1686212 - polysaccharide biosynthesis protein identified by match to protein family HMM PF01943 gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1674 HMPREF9243_1675 HMPREF9243_1675 purR purR 1686353 1687165 - pur operon repressor PurR identified by match to protein family HMM PF00156%3B match to protein family HMM PF09182%3B match to protein family HMM TIGR01743 gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1675 HMPREF9243_1676 HMPREF9243_1676 HMPREF9243_1676 1687339 1688028 - ABC 3 transport family protein identified by match to protein family HMM PF00950 gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1676 HMPREF9243_1677 HMPREF9243_1677 HMPREF9243_1677 1688082 1688792 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1677 HMPREF9243_1678 HMPREF9243_1678 HMPREF9243_1678 1688806 1689816 - ABC transporter%2C substrate-binding protein identified by match to protein family HMM PF01297 gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1678 HMPREF9243_1679 HMPREF9243_1679 ispE ispE 1690273 1691145 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase identified by match to protein family HMM PF00288%3B match to protein family HMM PF08544%3B match to protein family HMM TIGR00154 gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1679 HMPREF9243_1680 HMPREF9243_1680 HMPREF9243_1680 1691304 1691537 - hypothetical protein identified by match to protein family HMM PF06257 gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1680 HMPREF9243_1681 HMPREF9243_1681 HMPREF9243_1681 1691713 1692330 - hypothetical protein overlaps another CDS with the same product name gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1681 HMPREF9243_1682 HMPREF9243_1682 HMPREF9243_1682 1692330 1693067 - hypothetical protein overlaps another CDS with the same product name gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1682 HMPREF9243_1683 HMPREF9243_1683 natA natA 1693072 1693833 - sodium extrusion ABC transporter%2C ATP-binding protein NatA identified by match to protein family HMM PF00005 gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1683 HMPREF9243_1684 HMPREF9243_1684 ksgA ksgA 1694143 1695027 - dimethyladenosine transferase identified by match to protein family HMM PF00398%3B match to protein family HMM TIGR00755 gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1684 HMPREF9243_1685 HMPREF9243_1685 rnmV rnmV 1695020 1695604 - ribonuclease M5 identified by match to protein family HMM PF01751%3B match to protein family HMM TIGR00334 gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1685 HMPREF9243_1686 HMPREF9243_1686 HMPREF9243_1686 1695601 1696398 - hydrolase%2C TatD family identified by match to protein family HMM PF01026%3B match to protein family HMM PF04909%3B match to protein family HMM TIGR00010 gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1686 HMPREF9243_1687 HMPREF9243_1687 metG metG 1696524 1698524 - methionine--tRNA ligase identified by match to protein family HMM PF01406%3B match to protein family HMM PF01588%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00398%3B match to protein family HMM TIGR00399 gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1687 HMPREF9243_1688 HMPREF9243_1688 tyrS tyrS 1698634 1699896 - tyrosine--tRNA ligase identified by match to protein family HMM PF00579%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00234 gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1688 HMPREF9243_1690 HMPREF9243_1690 mgtA mgtA 1700226 1702868 - magnesium-importing ATPase identified by match to protein family HMM PF00122%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01524 gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1690 HMPREF9243_1691 HMPREF9243_1691 HMPREF9243_1691 1702893 1703042 - hypothetical protein identified by glimmer%3B putative gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1691 HMPREF9243_1693 HMPREF9243_1693 HMPREF9243_1693 1703388 1704026 - Formiminotransferase-cyclodeaminase identified by match to protein family HMM PF04961 gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1693 HMPREF9243_1694 HMPREF9243_1694 glnA glnA 1704330 1705667 + glutamine synthetase%2C type I identified by match to protein family HMM PF00120%3B match to protein family HMM PF03951%3B match to protein family HMM TIGR00653 gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1694 HMPREF9243_1695 HMPREF9243_1695 HMPREF9243_1695 1705771 1706478 - putative neutral zinc metallopeptidase identified by match to protein family HMM PF04298 gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1695 HMPREF9243_1696 HMPREF9243_1696 HMPREF9243_1696 1706550 1707515 - hypothetical protein gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1696 HMPREF9243_1697 HMPREF9243_1697 HMPREF9243_1697 1707778 1708386 + hypothetical protein gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1697 HMPREF9243_1698 HMPREF9243_1698 HMPREF9243_1698 1708379 1709692 + hypothetical protein gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1698 HMPREF9243_1699 HMPREF9243_1699 HMPREF9243_1699 1709740 1710909 - aminotransferase%2C class I/II identified by match to protein family HMM PF00155 gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1699 HMPREF9243_1700 HMPREF9243_1700 HMPREF9243_1700 1710906 1711400 - transcriptional regulator%2C AsnC family identified by match to protein family HMM PF01037 gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1700 HMPREF9243_1701 HMPREF9243_1701 HMPREF9243_1701 1711615 1712592 + hypothetical protein identified by match to protein family HMM PF06207 gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1701 HMPREF9243_1702 HMPREF9243_1702 rlmH rlmH 1712683 1713162 - rRNA large subunit m3Psi methyltransferase RlmH identified by match to protein family HMM PF02590%3B match to protein family HMM TIGR00246 gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1702 HMPREF9243_1703 HMPREF9243_1703 htrA htrA 1713538 1714821 - serine protease do-like HtrA identified by match to protein family HMM PF00089 gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1703 HMPREF9243_1704 HMPREF9243_1704 HMPREF9243_1704 1714910 1715740 - metallo-beta-lactamase domain protein identified by match to protein family HMM PF00753 gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1704 HMPREF9243_1705 HMPREF9243_1705 HMPREF9243_1705 1715760 1717418 - hypothetical protein identified by glimmer%3B putative gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1705 HMPREF9243_1706 HMPREF9243_1706 HMPREF9243_1706 1717434 1718333 - YycH protein identified by match to protein family HMM PF09648 gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1706 HMPREF9243_1707 HMPREF9243_1707 HMPREF9243_1707 1718348 1719823 - YycH protein identified by match to protein family HMM PF07435 gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1707 HMPREF9243_1708 HMPREF9243_1708 HMPREF9243_1708 1719823 1721694 - PAS domain S-box protein identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229 gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1708 HMPREF9243_1709 HMPREF9243_1709 HMPREF9243_1709 1721701 1722408 - response regulator receiver domain protein identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1709 HMPREF9243_1710 HMPREF9243_1710 HMPREF9243_1710 1722794 1724125 - CHAP domain protein identified by match to protein family HMM PF01476%3B match to protein family HMM PF05257 gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1710 HMPREF9243_1711 HMPREF9243_1711 HMPREF9243_1711 1724611 1725939 + chloride transporter%2C ClC family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00654 pseudogene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1711 HMPREF9243_1712 HMPREF9243_1712 HMPREF9243_1712 1725948 1726157 + conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1712 HMPREF9243_1713 HMPREF9243_1713 HMPREF9243_1713 1726579 1726776 - CsbD-like protein identified by match to protein family HMM PF05532 gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1713 HMPREF9243_1714 HMPREF9243_1714 HMPREF9243_1714 1726964 1727947 + biotin--[acetyl-CoA-carboxylase] ligase identified by match to protein family HMM PF03099%3B match to protein family HMM PF08279%3B match to protein family HMM TIGR00121 gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1714 HMPREF9243_1715 HMPREF9243_1715 HMPREF9243_1715 1728048 1728602 + BioY family protein identified by match to protein family HMM PF02632 gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1715 HMPREF9243_1716 HMPREF9243_1716 HMPREF9243_1716 1728653 1729699 - lipoyltransferase and lipoate-protein ligase identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00545 gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1716 HMPREF9243_1717 HMPREF9243_1717 HMPREF9243_1717 1729858 1731300 + NOL1/NOP2/sun family protein identified by match to protein family HMM PF01189%3B match to protein family HMM TIGR00446 gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1717 HMPREF9243_1718 HMPREF9243_1718 HMPREF9243_1718 1731374 1732216 + Cof-like hydrolase identified by match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1718 HMPREF9243_1719 HMPREF9243_1719 HMPREF9243_1719 1732281 1733063 + hypothetical protein identified by match to protein family HMM PF06738 gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1719 HMPREF9243_1720 HMPREF9243_1720 HMPREF9243_1720 1733060 1733557 + hypothetical protein gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1720 HMPREF9243_1721 HMPREF9243_1721 cinI cinI 1733605 1734588 + feruloyl esterase gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1721 HMPREF9243_1722 HMPREF9243_1722 HMPREF9243_1722 1734695 1735648 - Inosine-uridine preferring nucleoside hydrolase identified by match to protein family HMM PF01156 gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1722 HMPREF9243_1723 HMPREF9243_1723 HMPREF9243_1723 1735832 1737250 - cytosol aminopeptidase family%2C catalytic domain protein identified by match to protein family HMM PF00883%3B match to protein family HMM PF02789 gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1723 HMPREF9243_1724 HMPREF9243_1724 HMPREF9243_1724 1737444 1738220 + putative esterase identified by match to protein family HMM PF00756 gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1724 HMPREF9243_1725 HMPREF9243_1725 HMPREF9243_1725 1738289 1739023 - hypothetical protein gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1725 HMPREF9243_1726 HMPREF9243_1726 hemC hemC 1739049 1740047 - hydroxymethylbilane synthase identified by match to protein family HMM PF01379%3B match to protein family HMM PF03900%3B match to protein family HMM TIGR00212 gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1726 HMPREF9243_1727 HMPREF9243_1727 HMPREF9243_1727 1740044 1740502 - siroheme synthase domain protein gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1727 HMPREF9243_1728 HMPREF9243_1728 HMPREF9243_1728 1740543 1741103 - ATP:cob(I)alamin adenosyltransferase identified by match to protein family HMM PF01923%3B match to protein family HMM TIGR00636 gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1728 HMPREF9243_1729 HMPREF9243_1729 cobQ cobQ 1741105 1742613 - cobyric acid synthase CobQ identified by match to protein family HMM PF01656%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR00313 gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1729 HMPREF9243_1730 HMPREF9243_1730 cobI cobI 1742618 1743325 - precorrin-2 C(20)-methyltransferase identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01467 gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1730 HMPREF9243_1731 HMPREF9243_1731 cbiK cbiK 1743315 1744100 - cobalt chelatase (CbiK) identified by match to protein family HMM PF06180 gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1731 HMPREF9243_1732 HMPREF9243_1732 cobA cobA 1744112 1745122 - uroporphyrinogen-III C-methyltransferase identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01469 gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1732 HMPREF9243_1733 HMPREF9243_1733 cobK cobK 1745115 1745942 - precorrin-6A reductase identified by match to protein family HMM PF02571%3B match to protein family HMM TIGR00715 gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1733 HMPREF9243_1734 HMPREF9243_1734 cobJ cobJ 1745971 1746711 - precorrin-3B C(17)-methyltransferase identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01466 gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1734 HMPREF9243_1735 HMPREF9243_1735 HMPREF9243_1735 1746718 1747074 - putative cobalamin biosynthesis protein CbiG%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1735 HMPREF9243_1736 HMPREF9243_1736 HMPREF9243_1736 1747041 1747889 - cobalamin biosynthesis protein CbiG%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01890 pseudogene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1736 HMPREF9243_1737 HMPREF9243_1737 cobM cobM 1747873 1748625 - precorrin-4 C(11)-methyltransferase identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01465 gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1737 HMPREF9243_1738 HMPREF9243_1738 cbiT cbiT 1748660 1749214 - precorrin-6Y C5%2C15-methyltransferase (decarboxylating)%2C CbiT subunit identified by match to protein family HMM PF05175%3B match to protein family HMM PF08242%3B match to protein family HMM TIGR02469 gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1738 HMPREF9243_1739 HMPREF9243_1739 cbiE cbiE 1749204 1749830 - precorrin-6y C5%2C15-methyltransferase (decarboxylating)%2C CbiE subunit identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR02467 gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1739 HMPREF9243_1740 HMPREF9243_1740 cbiD cbiD 1749827 1750954 - cobalamin biosynthesis protein CbiD identified by match to protein family HMM PF01888%3B match to protein family HMM TIGR00312 gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1740 HMPREF9243_1741 HMPREF9243_1741 cobH cobH 1751000 1751461 - precorrin-8X methylmutase identified by match to protein family HMM PF02570 gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1741 HMPREF9243_1742 HMPREF9243_1742 cobB cobB 1751655 1753043 - cobyrinic acid a%2Cc-diamide synthase identified by match to protein family HMM PF01656%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR00379 gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1742 HMPREF9243_1743 HMPREF9243_1743 HMPREF9243_1743 1753040 1753510 - putative flavodoxin identified by match to protein family HMM PF00258 gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1743 HMPREF9243_1744 HMPREF9243_1744 HMPREF9243_1744 1753765 1755405 - ABC transporter%2C substrate-binding protein%2C family 5 identified by match to protein family HMM PF00496 gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1744 HMPREF9243_1745 HMPREF9243_1745 HMPREF9243_1745 1755421 1755939 - hypothetical protein gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1745 HMPREF9243_1746 HMPREF9243_1746 cobD cobD 1756014 1756964 - cobalamin biosynthesis protein CobD identified by match to protein family HMM PF03186%3B match to protein family HMM TIGR00380 gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1746 HMPREF9243_1747 HMPREF9243_1747 HMPREF9243_1747 1756991 1758076 - aminotransferase%2C class I/II identified by match to protein family HMM PF00155 gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1747 HMPREF9243_1748 HMPREF9243_1748 HMPREF9243_1748 1758052 1758702 - phosphoglycerate mutase family protein identified by match to protein family HMM PF00300 gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1748 HMPREF9243_1749 HMPREF9243_1749 cobS cobS 1758702 1759463 - adenosylcobinamide-GDP ribazoletransferase identified by match to protein family HMM PF02654%3B match to protein family HMM TIGR00317 gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1749 HMPREF9243_1750 HMPREF9243_1750 cobU cobU 1759468 1760055 - adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase identified by match to protein family HMM PF02283 gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1750 HMPREF9243_1751 HMPREF9243_1751 HMPREF9243_1751 1760057 1760833 - hypothetical protein gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1751 HMPREF9243_1752 HMPREF9243_1752 metE metE 1761218 1763497 + 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase identified by match to protein family HMM PF01717%3B match to protein family HMM PF08267%3B match to protein family HMM TIGR01371 gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1752 HMPREF9243_1753 HMPREF9243_1753 metF metF 1763475 1764329 + methylenetetrahydrofolate reductase (NAD(P)H) identified by match to protein family HMM PF02219%3B match to protein family HMM TIGR00676 gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1753 HMPREF9243_1754 HMPREF9243_1754 arcC arcC 1764387 1765313 - carbamate kinase identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR00746 gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1754 HMPREF9243_1755 HMPREF9243_1755 HMPREF9243_1755 1765433 1766524 - hypothetical protein gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1755 HMPREF9243_1756 HMPREF9243_1756 HMPREF9243_1756 1766514 1767695 - hypothetical protein gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1756 HMPREF9243_1757 HMPREF9243_1757 HMPREF9243_1757 1767737 1770295 - ATPase family associated with various cellular activities (AAA) identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724 gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1757 HMPREF9243_1758 HMPREF9243_1758 agcS agcS 1770513 1771883 - amino acid carrier protein identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835 gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1758 HMPREF9243_1759 HMPREF9243_1759 argF argF 1772266 1773258 - ornithine carbamoyltransferase identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00658 gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1759 HMPREF9243_1760 HMPREF9243_1760 HMPREF9243_1760 1773532 1773687 + hypothetical protein gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1760 HMPREF9243_1761 HMPREF9243_1761 HMPREF9243_1761 1773711 1774763 + transcriptional regulator%2C AraC family identified by match to protein family HMM PF00165 gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1761 HMPREF9243_1762 HMPREF9243_1762 HMPREF9243_1762 1774836 1775792 - putative membrane protein identified by match to protein family HMM PF00892 gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1762 HMPREF9243_1763 HMPREF9243_1763 HMPREF9243_1763 1775880 1776560 - hypothetical protein gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1763 HMPREF9243_1764 HMPREF9243_1764 HMPREF9243_1764 1776612 1777406 - TIGR00268 family protein identified by match to protein family HMM PF01171%3B match to protein family HMM TIGR00268 gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1764 HMPREF9243_1765 HMPREF9243_1765 HMPREF9243_1765 1777420 1777863 - conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1765 HMPREF9243_1766 HMPREF9243_1766 HMPREF9243_1766 1777887 1778627 - TIGR00299 family protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1766 HMPREF9243_1767 HMPREF9243_1767 HMPREF9243_1767 1778809 1780047 + hypothetical protein identified by glimmer%3B putative gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1767 HMPREF9243_1768 HMPREF9243_1768 HMPREF9243_1768 1780093 1781292 - hypothetical protein gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1768 HMPREF9243_1769 HMPREF9243_1769 HMPREF9243_1769 1781488 1782453 + glutathione S-transferase%2C C-terminal domain protein identified by match to protein family HMM PF00043 gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1769 HMPREF9243_1770 HMPREF9243_1770 HMPREF9243_1770 1782539 1782838 - hypothetical protein gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1770 HMPREF9243_1771 HMPREF9243_1771 HMPREF9243_1771 1782952 1783644 + response regulator receiver domain protein identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1771 HMPREF9243_1772 HMPREF9243_1772 HMPREF9243_1772 1783641 1784537 + histidine kinase A domain protein identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1772 HMPREF9243_1773 HMPREF9243_1773 HMPREF9243_1773 1784619 1785398 - hypothetical protein gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1773 HMPREF9243_1774 HMPREF9243_1774 HMPREF9243_1774 1785402 1786322 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1774 HMPREF9243_1775 HMPREF9243_1775 HMPREF9243_1775 1786595 1787608 - lipoyltransferase and lipoate-protein ligase identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00545 gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1775 HMPREF9243_1776 HMPREF9243_1776 HMPREF9243_1776 1787830 1791996 - putative septum site-determining protein MinC identified by match to protein family HMM PF04270%3B match to protein family HMM TIGR01363 gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1776 HMPREF9243_1777 HMPREF9243_1777 HMPREF9243_1777 1792014 1792955 - ABC transporter%2C substrate-binding protein identified by match to protein family HMM PF01297 gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1777 HMPREF9243_1778 HMPREF9243_1778 HMPREF9243_1778 1793178 1795013 + glycosyl hydrolase family 2%2C TIM barrel domain protein identified by match to protein family HMM PF00703%3B match to protein family HMM PF02836%3B match to protein family HMM PF02837 gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1778 HMPREF9243_1779 HMPREF9243_1779 HMPREF9243_1779 1795260 1796762 + hypothetical protein identified by match to protein family HMM PF08903 gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1779 HMPREF9243_1780 HMPREF9243_1780 HMPREF9243_1780 1796798 1797472 - TrkA N-terminal domain protein identified by match to protein family HMM PF02254 gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1780 HMPREF9243_1781 HMPREF9243_1781 HMPREF9243_1781 1797513 1798889 - potassium uptake protein%2C TrkH family identified by match to protein family HMM PF02386 gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1781 HMPREF9243_1782 HMPREF9243_1782 HMPREF9243_1782 1798907 1799212 - hypothetical protein gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1782 HMPREF9243_1783 HMPREF9243_1783 HMPREF9243_1783 1799278 1799412 + hypothetical protein identified by glimmer%3B putative gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1783 HMPREF9243_1784 HMPREF9243_1784 pstB pstB 1799426 1800229 - phosphate ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00972 gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1784 HMPREF9243_1785 HMPREF9243_1785 pstA pstA 1800231 1801052 - phosphate ABC transporter%2C permease protein PstA identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR00974 gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1785 HMPREF9243_1786 HMPREF9243_1786 pstC pstC 1801052 1801924 - phosphate ABC transporter%2C permease protein PstC identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR02138 gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1786 HMPREF9243_1787 HMPREF9243_1787 HMPREF9243_1787 1802032 1802928 - hypothetical protein pstS gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1787 HMPREF9243_1788 HMPREF9243_1788 HMPREF9243_1788 1803241 1805085 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1788 HMPREF9243_1789 HMPREF9243_1789 HMPREF9243_1789 1805082 1805825 - response regulator receiver domain protein identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1789 HMPREF9243_1790 HMPREF9243_1790 prfB prfB 1805910 1806902 - peptide chain release factor 2%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00020 pseudogene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1790 HMPREF9243_1791 HMPREF9243_1791 secA secA 1807644 1810016 - preprotein translocase%2C SecA subunit identified by match to protein family HMM PF00271%3B match to protein family HMM PF01043%3B match to protein family HMM PF07516%3B match to protein family HMM PF07517%3B match to protein family HMM TIGR00963 gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1791 HMPREF9243_1792 HMPREF9243_1792 raiA raiA 1810291 1810860 - ribosomal subunit interface protein identified by match to protein family HMM PF02482%3B match to protein family HMM TIGR00741 gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1792 HMPREF9243_1793 HMPREF9243_1793 HMPREF9243_1793 1810977 1811654 - comF family protein gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1793 HMPREF9243_1794 HMPREF9243_1794 HMPREF9243_1794 1811647 1812993 - helicase C-terminal domain protein identified by match to protein family HMM PF00271%3B match to protein family HMM PF04851 gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1794 HMPREF9243_1795 HMPREF9243_1795 HMPREF9243_1795 1813150 1813797 + YigZ family protein identified by match to protein family HMM PF01205%3B match to protein family HMM PF09186%3B match to protein family HMM TIGR00257 gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1795 HMPREF9243_1796 HMPREF9243_1796 HMPREF9243_1796 1814076 1814966 - integrase core domain protein identified by match to protein family HMM PF00665 gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1796 HMPREF9243_1797 HMPREF9243_1797 HMPREF9243_1797 1814966 1815289 - conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1797 HMPREF9243_1798 HMPREF9243_1798 eda eda 1815584 1816210 - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase identified by match to protein family HMM PF01081%3B match to protein family HMM TIGR01182 gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1798 HMPREF9243_1799 HMPREF9243_1799 HMPREF9243_1799 1816671 1817300 + deoxynucleoside kinase identified by match to protein family HMM PF01712 gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1799 HMPREF9243_1800 HMPREF9243_1800 pnuC pnuC 1817317 1818069 + nicotinamide mononucleotide transporter PnuC identified by match to protein family HMM TIGR01528 gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1800 HMPREF9243_1801 HMPREF9243_1801 glgP glgP 1818219 1820501 - phosphorylase%2C glycogen/starch/alpha-glucan family identified by match to protein family HMM PF00343%3B match to protein family HMM TIGR02093 gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1801 HMPREF9243_1802 HMPREF9243_1802 proS proS 1820872 1822326 - proline--tRNA ligase identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF09180%3B match to protein family HMM TIGR00408 gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1802 HMPREF9243_1804 HMPREF9243_1804 HMPREF9243_1804 1822917 1823912 + putative catabolite control protein A identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532 gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1804 HMPREF9243_1805 HMPREF9243_1805 HMPREF9243_1805 1823946 1824470 + thioesterase family protein identified by match to protein family HMM PF03061 gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1805 HMPREF9243_1806 HMPREF9243_1806 HMPREF9243_1806 1824557 1825702 - mannitol dehydrogenase domain protein identified by match to protein family HMM PF01232%3B match to protein family HMM PF08125 gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1806 HMPREF9243_1807 HMPREF9243_1807 HMPREF9243_1807 1825702 1826145 - phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 identified by match to protein family HMM PF00359 gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1807 HMPREF9243_1808 HMPREF9243_1808 HMPREF9243_1808 1826196 1828322 - PRD domain protein identified by match to protein family HMM PF00874 gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1808 HMPREF9243_1809 HMPREF9243_1809 mtlA mtlA 1828436 1830244 - PTS system%2C mannitol-specific IIC component identified by match to protein family HMM PF02302%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00851 gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1809 HMPREF9243_1810 HMPREF9243_1810 nagB nagB 1830543 1831262 + glucosamine-6-phosphate deaminase identified by match to protein family HMM PF01182%3B match to protein family HMM TIGR00502 gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1810 HMPREF9243_1811 HMPREF9243_1811 pdxB pdxB 1831255 1832211 + 4-phosphoerythronate dehydrogenase identified by match to protein family HMM PF02826 gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1811 HMPREF9243_1812 HMPREF9243_1812 HMPREF9243_1812 1832318 1833835 - ABC transporter%2C permease protein identified by match to protein family HMM PF00497%3B match to protein family HMM PF00528%3B match to protein family HMM TIGR01726 gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1812 HMPREF9243_1813 HMPREF9243_1813 argH argH 1833826 1835244 - argininosuccinate lyase identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00838 gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1813 HMPREF9243_1814 HMPREF9243_1814 HMPREF9243_1814 1835296 1836783 - ABC transporter%2C permease protein identified by match to protein family HMM PF00497%3B match to protein family HMM PF00528%3B match to protein family HMM TIGR01726 gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1814 HMPREF9243_1816 HMPREF9243_1816 HMPREF9243_1816 1837173 1838579 - aldehyde dehydrogenase (NAD) family protein identified by match to protein family HMM PF00171 gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1816 HMPREF9243_1817 HMPREF9243_1817 HMPREF9243_1817 1838750 1840468 + C4-dicarboxylate anaerobic carrier identified by match to protein family HMM PF03606 gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1817 HMPREF9243_1818 HMPREF9243_1818 iadA iadA 1840483 1841664 + beta-aspartyl peptidase identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR01975 gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1818 HMPREF9243_1819 HMPREF9243_1819 HMPREF9243_1819 1841721 1842623 - Acetamidase/Formamidase family protein identified by match to protein family HMM PF03069 gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1819 HMPREF9243_1820 HMPREF9243_1820 purB purB 1842760 1844055 - adenylosuccinate lyase identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00928 gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1820 HMPREF9243_1821 HMPREF9243_1821 purA purA 1844546 1845832 + adenylosuccinate synthase identified by match to protein family HMM PF00709%3B match to protein family HMM TIGR00184 gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1821 HMPREF9243_1822 HMPREF9243_1822 groL groL 1845960 1847588 - chaperonin GroL identified by match to protein family HMM PF00118%3B match to protein family HMM TIGR02348 gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1822 HMPREF9243_1823 HMPREF9243_1823 groS groS 1847669 1847938 - chaperonin GroS identified by match to protein family HMM PF00166 gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1823 HMPREF9243_1824 HMPREF9243_1824 HMPREF9243_1824 1848296 1848940 - CoA binding domain protein identified by match to protein family HMM PF02629%3B match to protein family HMM PF06971 gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1824 HMPREF9243_1825 HMPREF9243_1825 HMPREF9243_1825 1849176 1851125 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1825 HMPREF9243_1826 HMPREF9243_1826 HMPREF9243_1826 1851191 1851472 - hypothetical protein identified by match to protein family HMM PF04456 gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1826 HMPREF9243_1827 HMPREF9243_1827 HMPREF9243_1827 1851515 1852531 - putative glycoprotease GCP identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR00329%3B match to protein family HMM TIGR03723 gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1827 HMPREF9243_1828 HMPREF9243_1828 HMPREF9243_1828 1852509 1852907 - putative ribosomal-protein-alanine acetyltransferase identified by match to protein family HMM PF00583 gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1828 HMPREF9243_1829 HMPREF9243_1829 rimI rimI 1852948 1853610 - ribosomal-protein-alanine acetyltransferase identified by match to protein family HMM PF00583%3B match to protein family HMM TIGR01575 gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1829 HMPREF9243_1830 HMPREF9243_1830 yeaZ yeaZ 1853591 1854322 - universal bacterial protein YeaZ identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR03725 gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1830 HMPREF9243_1831 HMPREF9243_1831 HMPREF9243_1831 1854503 1854742 + hypothetical protein identified by match to protein family HMM PF05979 gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1831 HMPREF9243_1832 HMPREF9243_1832 HMPREF9243_1832 1854900 1856225 + transposase identified by match to protein family HMM PF01610 gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1832 HMPREF9243_1833 HMPREF9243_1833 HMPREF9243_1833 1856577 1856753 + hypothetical protein gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1833 HMPREF9243_1834 HMPREF9243_1834 xth xth 1856966 1857811 - exodeoxyribonuclease III identified by match to protein family HMM PF03372%3B match to protein family HMM TIGR00195%3B match to protein family HMM TIGR00633 gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1834 HMPREF9243_1835 HMPREF9243_1835 HMPREF9243_1835 1857939 1859246 - SWIM zinc finger domain protein identified by match to protein family HMM PF04434 gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1835 HMPREF9243_1836 HMPREF9243_1836 HMPREF9243_1836 1859371 1859922 + transposase identified by match to protein family HMM PF01527 gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1836 HMPREF9243_1837 HMPREF9243_1837 HMPREF9243_1837 1859922 1860812 + integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1837 HMPREF9243_1838 HMPREF9243_1838 HMPREF9243_1838 1861043 1862038 - D-lactate dehydrogenase identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826%3B match to protein family HMM PF03446 gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1838 HMPREF9243_1839 HMPREF9243_1839 brnQ brnQ 1862290 1863630 + branched-chain amino acid transport system II carrier protein identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796 gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1839 HMPREF9243_1840 HMPREF9243_1840 HMPREF9243_1840 1863701 1864558 - glutathione S-transferase%2C C-terminal domain protein identified by match to protein family HMM PF00043 gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1840 HMPREF9243_1841 HMPREF9243_1841 HMPREF9243_1841 1864652 1864996 - hypothetical protein identified by glimmer%3B putative gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1841 HMPREF9243_1842 HMPREF9243_1842 HMPREF9243_1842 1865137 1866225 - hypothetical protein gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1842 HMPREF9243_1843 HMPREF9243_1843 HMPREF9243_1843 1866244 1866441 - hypothetical protein gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1843 HMPREF9243_1844 HMPREF9243_1844 HMPREF9243_1844 1866560 1866955 - hypothetical protein gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1844 HMPREF9243_1845 HMPREF9243_1845 HMPREF9243_1845 1867219 1867332 - hypothetical protein identified by glimmer%3B putative gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1845 HMPREF9243_1846 HMPREF9243_1846 HMPREF9243_1846 1867563 1867724 - hypothetical protein gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1846 HMPREF9243_1847 HMPREF9243_1847 HMPREF9243_1847 1868246 1868470 - addiction module toxin%2C RelE/StbE family identified by match to protein family HMM TIGR02385 gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1847 HMPREF9243_1848 HMPREF9243_1848 HMPREF9243_1848 1868463 1868720 - addiction module antitoxin%2C RelB/DinJ family identified by match to protein family HMM PF04221%3B match to protein family HMM TIGR02384 gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1848 HMPREF9243_1849 HMPREF9243_1849 HMPREF9243_1849 1868888 1869190 - hypothetical protein gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1849 HMPREF9243_1850 HMPREF9243_1850 HMPREF9243_1850 1869232 1869852 - hydrolase%2C NUDIX family identified by match to protein family HMM PF00293 gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1850 HMPREF9243_1851 HMPREF9243_1851 HMPREF9243_1851 1869954 1871279 - hypothetical protein gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1851 HMPREF9243_1852 HMPREF9243_1852 HMPREF9243_1852 1871344 1871619 - conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error pseudogene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1852 HMPREF9243_1853 HMPREF9243_1853 HMPREF9243_1853 1871677 1872462 - conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error pseudogene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1853 HMPREF9243_1854 HMPREF9243_1854 HMPREF9243_1854 1872467 1873615 - NAD dependent epimerase/dehydratase family protein identified by match to protein family HMM PF01370 gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1854 HMPREF9243_1855 HMPREF9243_1855 HMPREF9243_1855 1873927 1874229 + rhodanese-like protein identified by match to protein family HMM PF00581 gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1855 HMPREF9243_1856 HMPREF9243_1856 HMPREF9243_1856 1874368 1874670 + rhodanese-like protein identified by match to protein family HMM PF00581 gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1856 HMPREF9243_1857 HMPREF9243_1857 HMPREF9243_1857 1874875 1876083 + transporter%2C dicarboxylate/amino acid:cation Na+/H+ symporter family protein identified by match to protein family HMM PF00375 gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1857 HMPREF9243_1858 HMPREF9243_1858 HMPREF9243_1858 1876157 1876861 - hypothetical protein identified by match to protein family HMM PF04474 gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1858 HMPREF9243_1859 HMPREF9243_1859 brnQ brnQ 1877196 1878509 + branched-chain amino acid transport system II carrier protein identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796 gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1859 HMPREF9243_1860 HMPREF9243_1860 HMPREF9243_1860 1878653 1879093 + hypothetical protein identified by match to protein family HMM PF08000 gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1860 HMPREF9243_1861 HMPREF9243_1861 HMPREF9243_1861 1879161 1880474 - transporter%2C dicarboxylate/amino acid:cation Na+/H+ symporter family protein identified by match to protein family HMM PF00375 gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1861 HMPREF9243_1862 HMPREF9243_1862 HMPREF9243_1862 1880697 1881317 + hypothetical protein gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1862 HMPREF9243_1863 HMPREF9243_1863 HMPREF9243_1863 1881394 1882029 - 2-keto-3-deoxygluconate permease%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1863 HMPREF9243_1864 HMPREF9243_1864 HMPREF9243_1864 1882059 1882361 - conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1864 HMPREF9243_1865 HMPREF9243_1865 HMPREF9243_1865 1882639 1885221 + N-acetylmuramoyl-L-alanine amidase identified by match to protein family HMM PF01476%3B match to protein family HMM PF01520%3B match to protein family HMM PF07501 gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1865 HMPREF9243_1866 HMPREF9243_1866 HMPREF9243_1866 1885395 1886366 + rhodanese-like protein identified by match to protein family HMM PF00581 gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1866 HMPREF9243_1867 HMPREF9243_1867 HMPREF9243_1867 1886458 1886820 - hypothetical protein identified by glimmer%3B putative gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1867 HMPREF9243_1868 HMPREF9243_1868 HMPREF9243_1868 1887053 1888267 - methionine synthase%2C vitamin-B12 independent identified by match to protein family HMM PF01717 gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1868 HMPREF9243_1869 HMPREF9243_1869 HMPREF9243_1869 1888525 1888598 - tRNA-Pro tRNA gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1869 HMPREF9243_1870 HMPREF9243_1870 HMPREF9243_1870 1888713 1889441 + hypothetical protein gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1870 HMPREF9243_1871 HMPREF9243_1871 HMPREF9243_1871 1889508 1890104 - hypothetical protein gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1871 HMPREF9243_1872 HMPREF9243_1872 fba fba 1890249 1891157 - fructose-1%2C6-bisphosphate aldolase%2C class II identified by match to protein family HMM PF01116%3B match to protein family HMM TIGR00167%3B match to protein family HMM TIGR01859 gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1872 HMPREF9243_1873 HMPREF9243_1873 HMPREF9243_1873 1891435 1892577 - putative L-lactate oxidase identified by match to protein family HMM PF01070%3B match to protein family HMM PF01180 gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1873 HMPREF9243_1874 HMPREF9243_1874 HMPREF9243_1874 1892807 1893106 - CAAX amino terminal protease family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02517 pseudogene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1874 HMPREF9243_1875 HMPREF9243_1875 HMPREF9243_1875 1893103 1893540 - conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1875 HMPREF9243_1876 HMPREF9243_1876 HMPREF9243_1876 1893578 1895563 - ABC transporter%2C permease protein gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1876 HMPREF9243_1877 HMPREF9243_1877 HMPREF9243_1877 1895565 1896314 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1877 HMPREF9243_1878 HMPREF9243_1878 HMPREF9243_1878 1896421 1897320 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein identified by match to protein family HMM PF02518 gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1878 HMPREF9243_1879 HMPREF9243_1879 HMPREF9243_1879 1897317 1898054 - response regulator receiver domain protein identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1879 HMPREF9243_1880 HMPREF9243_1880 HMPREF9243_1880 1898206 1898661 + TipAS antibiotic-recognition domain protein identified by match to protein family HMM PF07739 gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1880 HMPREF9243_1881 HMPREF9243_1881 HMPREF9243_1881 1898667 1898786 + hypothetical protein identified by glimmer%3B putative gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1881 HMPREF9243_1882 HMPREF9243_1882 HMPREF9243_1882 1899290 1899559 + hypothetical protein gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1882 HMPREF9243_1883 HMPREF9243_1883 HMPREF9243_1883 1899639 1900364 + TipAS antibiotic-recognition domain protein identified by match to protein family HMM PF00376%3B match to protein family HMM PF07739 gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1883 HMPREF9243_1886 HMPREF9243_1886 trpD trpD 1901076 1902119 + anthranilate phosphoribosyltransferase identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM TIGR01245 gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1886 HMPREF9243_1887 HMPREF9243_1887 trpC trpC 1902091 1902891 + indole-3-glycerol phosphate synthase identified by match to protein family HMM PF00218 gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1887 HMPREF9243_1888 HMPREF9243_1888 trpF trpF 1902881 1903483 + N-(5'phosphoribosyl)anthranilate isomerase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00697 pseudogene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1888 HMPREF9243_1889 HMPREF9243_1889 trpB trpB 1903476 1904660 + tryptophan synthase%2C beta subunit identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00263 gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1889 HMPREF9243_1890 HMPREF9243_1890 trpA trpA 1904653 1905426 + tryptophan synthase%2C alpha subunit identified by match to protein family HMM PF00290%3B match to protein family HMM TIGR00262 gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1890 HMPREF9243_1891 HMPREF9243_1891 HMPREF9243_1891 1905449 1905571 - hypothetical protein identified by glimmer%3B putative gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1891 HMPREF9243_1892 HMPREF9243_1892 HMPREF9243_1892 1905731 1906762 + SPFH/Band 7/PHB domain protein identified by match to protein family HMM PF01145 gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1892 HMPREF9243_1893 HMPREF9243_1893 HMPREF9243_1893 1906762 1906956 + hypothetical protein gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1893 HMPREF9243_1894 HMPREF9243_1894 HMPREF9243_1894 1907016 1907756 - hypothetical protein gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1894 HMPREF9243_1895 HMPREF9243_1895 HMPREF9243_1895 1907952 1908242 - hypothetical protein gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1895 HMPREF9243_1896 HMPREF9243_1896 HMPREF9243_1896 1908441 1908977 + 6-O-methylguanine DNA methyltransferase%2C DNA binding domain protein identified by match to protein family HMM PF01035%3B match to protein family HMM TIGR00589 gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1896 HMPREF9243_1897 HMPREF9243_1897 tag tag 1908974 1909519 + DNA-3-methyladenine glycosylase I identified by match to protein family HMM PF03352 gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1897 HMPREF9243_1898 HMPREF9243_1898 HMPREF9243_1898 1909556 1912519 - hypothetical protein gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1898 HMPREF9243_1899 HMPREF9243_1899 HMPREF9243_1899 1912693 1912965 - hypothetical protein identified by glimmer%3B putative gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1899 HMPREF9243_1900 HMPREF9243_1900 HMPREF9243_1900 1913238 1914272 + periplasmic binding protein identified by match to protein family HMM PF01497 gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1900 HMPREF9243_1901 HMPREF9243_1901 HMPREF9243_1901 1914274 1915263 + iron chelate uptake ABC transporter%2C FeCT family%2C permease protein identified by match to protein family HMM PF01032 gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1901 HMPREF9243_1902 HMPREF9243_1902 HMPREF9243_1902 1915327 1916043 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1902 HMPREF9243_1903 HMPREF9243_1903 HMPREF9243_1903 1916069 1917286 + hypothetical protein gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1903 HMPREF9243_1904 HMPREF9243_1904 HMPREF9243_1904 1917537 1918991 - Na+/H+ antiporter family protein identified by match to protein family HMM PF03553 gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1904 HMPREF9243_1905 HMPREF9243_1905 HMPREF9243_1905 1919005 1920054 - oxidoreductase%2C aldo/keto reductase family protein identified by match to protein family HMM PF00248 gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1905 HMPREF9243_1906 HMPREF9243_1906 HMPREF9243_1906 1920069 1920401 - hypothetical protein gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1906 HMPREF9243_1907 HMPREF9243_1907 HMPREF9243_1907 1920764 1921189 - hypothetical protein gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1907 HMPREF9243_1910 HMPREF9243_1910 HMPREF9243_1910 1921390 1923825 - efflux ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1910 HMPREF9243_1911 HMPREF9243_1911 HMPREF9243_1911 1923818 1924498 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1911 HMPREF9243_1912 HMPREF9243_1912 HMPREF9243_1912 1924596 1925423 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1912 HMPREF9243_1913 HMPREF9243_1913 HMPREF9243_1913 1925432 1926073 - response regulator receiver domain protein identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1913 HMPREF9243_1914 HMPREF9243_1914 HMPREF9243_1914 1926409 1927002 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1914 HMPREF9243_1915 HMPREF9243_1915 HMPREF9243_1915 1927015 1928307 + transporter%2C major facilitator family protein identified by match to protein family HMM PF07690 gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1915 HMPREF9243_1916 HMPREF9243_1916 HMPREF9243_1916 1928285 1930591 + efflux ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1916 HMPREF9243_1917 HMPREF9243_1917 HMPREF9243_1917 1930593 1931342 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1917 HMPREF9243_1918 HMPREF9243_1918 HMPREF9243_1918 1931457 1932104 - hypothetical protein gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1918 HMPREF9243_1919 HMPREF9243_1919 HMPREF9243_1919 1932104 1932442 - transcriptional regulator%2C PadR family identified by match to protein family HMM PF03551 gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1919 HMPREF9243_1920 HMPREF9243_1920 HMPREF9243_1920 1932563 1933114 + transposase identified by match to protein family HMM PF01527 gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1920 HMPREF9243_1921 HMPREF9243_1921 HMPREF9243_1921 1933114 1933950 + integrase core domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00665 pseudogene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1921 HMPREF9243_1922 HMPREF9243_1922 HMPREF9243_1922 1934291 1935247 - ABC-2 type transporter identified by match to protein family HMM PF01061 gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1922 HMPREF9243_1923 HMPREF9243_1923 HMPREF9243_1923 1935249 1935989 - ABC-2 type transporter identified by match to protein family HMM PF01061 gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1923 HMPREF9243_1924 HMPREF9243_1924 HMPREF9243_1924 1936008 1936949 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1924 HMPREF9243_1925 HMPREF9243_1925 HMPREF9243_1925 1936961 1937542 - transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1925 HMPREF9243_1926 HMPREF9243_1926 rumA rumA 1937798 1939195 - 23S rRNA (uracil-5-)-methyltransferase RumA identified by match to protein family HMM PF02475%3B match to protein family HMM PF05958%3B match to protein family HMM TIGR00479 gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1926 HMPREF9243_1927 HMPREF9243_1927 HMPREF9243_1927 1939405 1939962 + isochorismatase family protein identified by match to protein family HMM PF00857 gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1927 HMPREF9243_1928 HMPREF9243_1928 HMPREF9243_1928 1940082 1940756 - hypothetical protein gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1928 HMPREF9243_1929 HMPREF9243_1929 HMPREF9243_1929 1940862 1941296 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1929 HMPREF9243_1930 HMPREF9243_1930 HMPREF9243_1930 1941466 1942611 - hypothetical protein gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1930 HMPREF9243_1931 HMPREF9243_1931 HMPREF9243_1931 1942758 1943264 - hypothetical protein identified by glimmer%3B putative gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1931 HMPREF9243_1932 HMPREF9243_1932 HMPREF9243_1932 1943322 1944863 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1932 HMPREF9243_1933 HMPREF9243_1933 HMPREF9243_1933 1945140 1945754 - hypothetical protein identified by glimmer%3B putative gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1933 HMPREF9243_1934 HMPREF9243_1934 HMPREF9243_1934 1945807 1946343 - hypothetical protein identified by glimmer%3B putative gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1934 HMPREF9243_1935 HMPREF9243_1935 HMPREF9243_1935 1946640 1947518 - hypothetical protein identified by match to protein family HMM PF01887 gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1935 HMPREF9243_1936 HMPREF9243_1936 HMPREF9243_1936 1947521 1948129 - conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1936 HMPREF9243_1937 HMPREF9243_1937 HMPREF9243_1937 1948093 1948368 - conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1937 HMPREF9243_1938 HMPREF9243_1938 HMPREF9243_1938 1948440 1949282 - cobalt transport protein identified by match to protein family HMM PF02361 gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1938 HMPREF9243_1939 HMPREF9243_1939 HMPREF9243_1939 1949283 1951013 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1939 HMPREF9243_1940 HMPREF9243_1940 HMPREF9243_1940 1951013 1951570 - hypothetical protein identified by match to protein family HMM PF07155 gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1940 HMPREF9243_1941 HMPREF9243_1941 HMPREF9243_1941 1951857 1952699 - transcriptional regulator%2C MerR family identified by match to protein family HMM PF00376 gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1941 HMPREF9243_1942 HMPREF9243_1942 HMPREF9243_1942 1952748 1952861 - hypothetical protein identified by glimmer%3B putative gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1942 HMPREF9243_1943 HMPREF9243_1943 HMPREF9243_1943 1953032 1953250 - hypothetical protein gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1943 HMPREF9243_1944 HMPREF9243_1944 rumA rumA 1953473 1954852 - 23S rRNA (uracil-5-)-methyltransferase RumA identified by match to protein family HMM PF01938%3B match to protein family HMM PF02475%3B match to protein family HMM PF05958%3B match to protein family HMM TIGR00479 gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1944 HMPREF9243_1945 HMPREF9243_1945 HMPREF9243_1945 1955029 1955793 + hypothetical protein gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1945 HMPREF9243_1946 HMPREF9243_1946 HMPREF9243_1946 1955884 1956723 + oxidoreductase%2C aldo/keto reductase family protein identified by match to protein family HMM PF00248 gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1946 HMPREF9243_1947 HMPREF9243_1947 luxS luxS 1956792 1957277 - S-ribosylhomocysteinase LuxS identified by match to protein family HMM PF02664 gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1947 HMPREF9243_1948 HMPREF9243_1948 HMPREF9243_1948 1957354 1958331 - transcriptional regulator%2C LacI family identified by match to protein family HMM PF00356 gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1948 HMPREF9243_1949 HMPREF9243_1949 HMPREF9243_1949 1958355 1959935 - 5'-nucleotidase%2C C-terminal domain protein identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872 gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1949 HMPREF9243_1950 HMPREF9243_1950 phnE phnE 1959947 1960762 - phosphonate ABC transporter%2C permease protein PhnE identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01097 gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1950 HMPREF9243_1951 HMPREF9243_1951 phnE phnE 1960774 1961577 - phosphonate ABC transporter%2C permease protein PhnE identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01097 gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1951 HMPREF9243_1952 HMPREF9243_1952 phnC phnC 1961588 1962325 - phosphonate ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR02315 gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1952 HMPREF9243_1953 HMPREF9243_1953 phnD phnD 1962496 1963539 - phosphate/phosphite/phosphonate ABC transporter%2C periplasmic binding protein identified by match to protein family HMM TIGR01098 gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1953 HMPREF9243_1954 HMPREF9243_1954 HMPREF9243_1954 1963896 1971557 - LPXTG-motif cell wall anchor domain protein identified by match to protein family HMM PF07501%3B match to protein family HMM TIGR01167 gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1954 HMPREF9243_1955 HMPREF9243_1955 HMPREF9243_1955 1971735 1972625 - integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1955 HMPREF9243_1956 HMPREF9243_1956 HMPREF9243_1956 1972625 1973176 - transposase identified by match to protein family HMM PF01527 gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1956 HMPREF9243_1957 HMPREF9243_1957 gatB gatB 1973595 1975025 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase%2C B subunit identified by match to protein family HMM PF01162%3B match to protein family HMM PF02637%3B match to protein family HMM PF02934%3B match to protein family HMM TIGR00133 gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1957 HMPREF9243_1958 HMPREF9243_1958 gatA gatA 1975041 1976492 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase%2C A subunit identified by match to protein family HMM PF01425%3B match to protein family HMM TIGR00132 gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1958 HMPREF9243_1959 HMPREF9243_1959 gatC gatC 1976498 1976797 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase%2C C subunit identified by match to protein family HMM PF02686%3B match to protein family HMM TIGR00135 gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1959 HMPREF9243_1960 HMPREF9243_1960 HMPREF9243_1960 1977083 1978219 - CamS sex pheromone family protein gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1960 HMPREF9243_1961 HMPREF9243_1961 ligA ligA 1978283 1980316 - DNA ligase (NAD+) identified by match to protein family HMM PF00533%3B match to protein family HMM PF00633%3B match to protein family HMM PF01653%3B match to protein family HMM PF03119%3B match to protein family HMM PF03120%3B match to protein family HMM TIGR00575 gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1961 HMPREF9243_1962 HMPREF9243_1962 pcrA pcrA 1980328 1982784 - ATP-dependent DNA helicase PcrA identified by match to protein family HMM PF00580%3B match to protein family HMM TIGR01073 gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1962 HMPREF9243_1963 HMPREF9243_1963 HMPREF9243_1963 1982937 1983593 - transcriptional regulator%2C GntR family identified by match to protein family HMM PF00392 gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1963 HMPREF9243_1964 HMPREF9243_1964 HMPREF9243_1964 1983674 1984327 - mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase identified by match to protein family HMM PF01832 gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1964 HMPREF9243_1965 HMPREF9243_1965 HMPREF9243_1965 1984563 1984727 + hypothetical protein identified by glimmer%3B putative gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1965 HMPREF9243_1966 HMPREF9243_1966 HMPREF9243_1966 1984794 1985609 - hypothetical protein identified by match to protein family HMM PF03618 gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1966 HMPREF9243_1967 HMPREF9243_1967 HMPREF9243_1967 1985606 1986235 - CBS domain protein identified by match to protein family HMM PF00571%3B match to protein family HMM PF08279 gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1967 HMPREF9243_1968 HMPREF9243_1968 HMPREF9243_1968 1986275 1987066 - PEP-utilizing enzyme%2C TIM barrel domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02896 pseudogene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1968 HMPREF9243_1969 HMPREF9243_1969 HMPREF9243_1969 1987063 1988382 - putative pyruvate%2C phosphate dikinase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00391%3B match to protein family HMM PF01326 pseudogene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1969 HMPREF9243_1970 HMPREF9243_1970 HMPREF9243_1970 1988394 1988912 - pyruvate phosphate dikinase%2C PEP/pyruvate binding domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01326 pseudogene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1970 HMPREF9243_1971 HMPREF9243_1971 HMPREF9243_1971 1989116 1989823 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1971 HMPREF9243_1972 HMPREF9243_1972 HMPREF9243_1972 1989827 1990600 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1972 HMPREF9243_1973 HMPREF9243_1973 HMPREF9243_1973 1990602 1991609 - branched-chain amino acid ABC transporter%2C permease protein identified by match to protein family HMM PF02653 gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1973 HMPREF9243_1974 HMPREF9243_1974 HMPREF9243_1974 1991619 1992497 - branched-chain amino acid ABC transporter%2C permease protein identified by match to protein family HMM PF02653 gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1974 HMPREF9243_1975 HMPREF9243_1975 HMPREF9243_1975 1992645 1993823 - receptor family ligand-binding protein identified by match to protein family HMM PF01094 gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1975 HMPREF9243_1976 HMPREF9243_1976 HMPREF9243_1976 1994046 1995221 - receptor family ligand-binding protein identified by match to protein family HMM PF01094 gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1976 HMPREF9243_1977 HMPREF9243_1977 HMPREF9243_1977 1995747 1996910 - receptor family ligand-binding protein identified by match to protein family HMM PF01094 gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1977 HMPREF9243_1978 HMPREF9243_1978 HMPREF9243_1978 1997208 2000039 - efflux ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1978 HMPREF9243_1979 HMPREF9243_1979 HMPREF9243_1979 2000033 2000734 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1979 HMPREF9243_1980 HMPREF9243_1980 HMPREF9243_1980 2000902 2001717 + Cof-like hydrolase identified by match to protein family HMM PF00702%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1980 HMPREF9243_1981 HMPREF9243_1981 HMPREF9243_1981 2001778 2002950 - PIN domain protein identified by match to protein family HMM PF01850 gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1981 HMPREF9243_1982 HMPREF9243_1982 radA radA 2003037 2004425 - DNA repair protein RadA identified by match to protein family HMM TIGR00416 gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1982 HMPREF9243_1983 HMPREF9243_1983 dut dut 2004445 2004966 - dUTP diphosphatase identified by match to protein family HMM PF00692 gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1983 HMPREF9243_1984 HMPREF9243_1984 HMPREF9243_1984 2005123 2005308 + hypothetical protein identified by glimmer%3B putative gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1984 HMPREF9243_1985 HMPREF9243_1985 HMPREF9243_1985 2005772 2006221 - hypothetical protein gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1985 HMPREF9243_1986 HMPREF9243_1986 HMPREF9243_1986 2006435 2007271 - integrase core domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00665 pseudogene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1986 HMPREF9243_1987 HMPREF9243_1987 HMPREF9243_1987 2007271 2007822 - transposase identified by match to protein family HMM PF01527 gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1987 HMPREF9243_1988 HMPREF9243_1988 HMPREF9243_1988 2007856 2008944 - LysM domain protein identified by match to protein family HMM PF01476 gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1988 HMPREF9243_1989 HMPREF9243_1989 ppc ppc 2009340 2012051 + phosphoenolpyruvate carboxykinase (GTP) identified by match to protein family HMM PF00311 gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1989 HMPREF9243_1990 HMPREF9243_1990 HMPREF9243_1990 2012128 2012841 - hypothetical protein identified by match to protein family HMM PF06570 gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1990 HMPREF9243_1991 HMPREF9243_1991 ychF ychF 2012854 2013951 - GTP-binding protein YchF identified by match to protein family HMM PF01926%3B match to protein family HMM PF06071%3B match to protein family HMM TIGR00092 gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1991 HMPREF9243_1992 HMPREF9243_1992 HMPREF9243_1992 2014060 2014263 - hypothetical protein identified by match to protein family HMM PF06107 gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1992 HMPREF9243_1993 HMPREF9243_1993 spo0J spo0J 2014274 2015239 - stage 0 sporulation protein J identified by match to protein family HMM PF02195%3B match to protein family HMM TIGR00180 gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1993 HMPREF9243_1994 HMPREF9243_1994 soj soj 2015229 2015993 - sporulation initiation inhibitor protein Soj identified by match to protein family HMM PF01656 gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1994 HMPREF9243_1995 HMPREF9243_1995 HMPREF9243_1995 2016315 2017121 - hypothetical protein gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1995 HMPREF9243_1996 HMPREF9243_1996 HMPREF9243_1996 2017123 2018001 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1996 HMPREF9243_1997 HMPREF9243_1997 HMPREF9243_1997 2018192 2019907 - polysaccharide biosynthesis protein identified by match to protein family HMM PF01943%3B match to protein family HMM PF03023 gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1997 HMPREF9243_1998 HMPREF9243_1998 HMPREF9243_1998 2020160 2021404 + FemAB family protein identified by match to protein family HMM PF02388 gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1998 HMPREF9243_1999 HMPREF9243_1999 HMPREF9243_1999 2021592 2022326 - hypothetical protein overlaps another CDS with the same product name gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_1999 HMPREF9243_2000 HMPREF9243_2000 HMPREF9243_2000 2022323 2023075 - hypothetical protein overlaps another CDS with the same product name gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2000 HMPREF9243_2001 HMPREF9243_2001 HMPREF9243_2001 2023077 2023985 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2001 HMPREF9243_2002 HMPREF9243_2002 pepT pepT 2024286 2025506 - peptidase T identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01882 gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2002 HMPREF9243_2003 HMPREF9243_2003 HMPREF9243_2003 2025560 2027191 - ABC transporter%2C substrate-binding protein%2C family 5 identified by match to protein family HMM PF00496 gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2003 HMPREF9243_2004 HMPREF9243_2004 HMPREF9243_2004 2027500 2030280 - LPXTG-motif cell wall anchor domain protein identified by match to protein family HMM PF05738 gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2004 HMPREF9243_2005 HMPREF9243_2005 gidB gidB 2030622 2031341 - 16S rRNA methyltransferase GidB identified by match to protein family HMM PF02527%3B match to protein family HMM TIGR00138 gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2005 HMPREF9243_2006 HMPREF9243_2006 HMPREF9243_2006 2031539 2033320 + LytS/YhcK-type transmembrane receptor domain protein identified by match to protein family HMM PF02518%3B match to protein family HMM PF06580%3B match to protein family HMM PF07694 gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2006 HMPREF9243_2007 HMPREF9243_2007 lytT lytT 2033323 2034054 + sensory transduction protein LytT identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397 gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2007 HMPREF9243_2008 HMPREF9243_2008 HMPREF9243_2008 2034210 2034659 + LrgA family protein identified by match to protein family HMM PF03788 gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2008 HMPREF9243_2009 HMPREF9243_2009 HMPREF9243_2009 2034712 2035395 + putative TIGR00659 family protein identified by match to protein family HMM PF04172 gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2009 HMPREF9243_2010 HMPREF9243_2010 HMPREF9243_2010 2035478 2036662 - transporter%2C major facilitator family protein identified by match to protein family HMM PF07690 gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2010 HMPREF9243_2011 HMPREF9243_2011 HMPREF9243_2011 2036753 2037727 - hypothetical protein gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2011 HMPREF9243_2012 HMPREF9243_2012 HMPREF9243_2012 2037802 2038008 - PspC domain protein identified by match to protein family HMM PF04024 gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2012 HMPREF9243_2013 HMPREF9243_2013 HMPREF9243_2013 2038333 2038842 - magnesium transporter%2C CorA family%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2013 HMPREF9243_2014 HMPREF9243_2014 HMPREF9243_2014 2038863 2039249 - magnesium transporter%2C CorA family%3B this gene contains a frame shift which may be the result of a sequencing error pseudogene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2014 HMPREF9243_2015 HMPREF9243_2015 HMPREF9243_2015 2039503 2041014 + ABC transporter%2C substrate-binding protein%2C family 5 identified by match to protein family HMM PF00496 gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2015 HMPREF9243_2016 HMPREF9243_2016 HMPREF9243_2016 2041059 2041982 + ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2016 HMPREF9243_2017 HMPREF9243_2017 HMPREF9243_2017 2041972 2042751 + ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2017 HMPREF9243_2018 HMPREF9243_2018 HMPREF9243_2018 2042759 2044267 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2018 HMPREF9243_2019 HMPREF9243_2019 HMPREF9243_2019 2044337 2044888 + transposase identified by match to protein family HMM PF01527 gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2019 HMPREF9243_2020 HMPREF9243_2020 HMPREF9243_2020 2044888 2045778 + integrase core domain protein identified by match to protein family HMM PF00665%3B overlaps another CDS with the same product name gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2020 HMPREF9243_2021 HMPREF9243_2021 gidA gidA 2046092 2048026 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00136 gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2021 HMPREF9243_2022 HMPREF9243_2022 HMPREF9243_2022 2048254 2049240 - DNA-binding helix-turn-helix protein identified by match to protein family HMM PF01381 gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2022 HMPREF9243_2023 HMPREF9243_2023 trmE trmE 2049664 2051064 - tRNA modification GTPase TrmE identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00450 gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2023 HMPREF9243_2024 HMPREF9243_2024 HMPREF9243_2024 2051252 2051992 - cobalt ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01166 gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2024 HMPREF9243_2025 HMPREF9243_2025 HMPREF9243_2025 2052074 2052769 - cobalt transport protein identified by match to protein family HMM PF02361 gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2025 HMPREF9243_2026 HMPREF9243_2026 cbiN cbiN 2052841 2053128 - cobalt transport protein identified by match to protein family HMM PF02553 gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2026 HMPREF9243_2027 HMPREF9243_2027 cbiM cbiM 2053129 2053860 - cobalamin biosynthesis protein CbiM identified by match to protein family HMM PF01891%3B match to protein family HMM TIGR00123 gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2027 HMPREF9243_2028 HMPREF9243_2028 HMPREF9243_2028 2053894 2054007 - hypothetical protein identified by glimmer%3B putative gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2028 HMPREF9243_2029 HMPREF9243_2029 HMPREF9243_2029 2054295 2055617 + hypothetical protein identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471 gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2029 HMPREF9243_2030 HMPREF9243_2030 HMPREF9243_2030 2055925 2057295 - pyridine nucleotide-disulfide oxidoreductase identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992 gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2030 HMPREF9243_2031 HMPREF9243_2031 cadA cadA 2057533 2059326 - cadmium-exporting ATPase identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01512%3B match to protein family HMM TIGR01525 gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2031 HMPREF9243_2032 HMPREF9243_2032 HMPREF9243_2032 2059546 2060760 + hypothetical protein identified by match to protein family HMM PF01594 gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2032 HMPREF9243_2033 HMPREF9243_2033 HMPREF9243_2033 2060919 2061242 + hypothetical protein identified by match to protein family HMM PF01906 gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2033 HMPREF9243_2034 HMPREF9243_2034 HMPREF9243_2034 2061437 2062111 + peptidase propeptide and YPEB domain protein identified by match to protein family HMM PF03413 gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2034 HMPREF9243_2035 HMPREF9243_2035 HMPREF9243_2035 2062196 2064448 - Sigma-54 interaction domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00158%3B match to protein family HMM PF00874 pseudogene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2035 HMPREF9243_2036 HMPREF9243_2036 HMPREF9243_2036 2064478 2064762 - transcriptional regulator%2C ArsR family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01022 pseudogene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2036 HMPREF9243_2037 HMPREF9243_2037 HMPREF9243_2037 2064857 2065705 - PTS system mannose/fructose/sorbose family IID component identified by match to protein family HMM PF03613 gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2037 HMPREF9243_2038 HMPREF9243_2038 HMPREF9243_2038 2065702 2066520 - PTS system sorbose-specific iic component identified by match to protein family HMM PF03609 gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2038 HMPREF9243_2039 HMPREF9243_2039 HMPREF9243_2039 2066543 2067037 - PTS system sorbose subfamily IIB component identified by match to protein family HMM PF03830 gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2039 HMPREF9243_2040 HMPREF9243_2040 HMPREF9243_2040 2067062 2067481 - PTS system fructose IIA component identified by match to protein family HMM PF03610 gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2040 HMPREF9243_2041 HMPREF9243_2041 rpoN rpoN 2067612 2068943 + RNA polymerase sigma-54 factor identified by match to protein family HMM PF04552%3B match to protein family HMM PF04963%3B match to protein family HMM TIGR02395 gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2041 HMPREF9243_2042 HMPREF9243_2042 HMPREF9243_2042 2069072 2070286 - acyl-CoA dehydrogenase%2C C-terminal domain protein identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF08028 gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2042 HMPREF9243_2043 HMPREF9243_2043 hbd hbd 2070387 2071304 - 3-hydroxybutyryl-CoA dehydrogenase identified by match to protein family HMM PF00725%3B match to protein family HMM PF02737 gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2043 HMPREF9243_2044 HMPREF9243_2044 HMPREF9243_2044 2071658 2072665 - R3H domain protein identified by match to protein family HMM PF01424 gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2044 HMPREF9243_2045 HMPREF9243_2045 HMPREF9243_2045 2072681 2073442 - membrane protein insertase%2C YidC/Oxa1 family identified by match to protein family HMM PF02096%3B match to protein family HMM TIGR03592 gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2045 HMPREF9243_2046 HMPREF9243_2046 rnpA rnpA 2073524 2073910 - ribonuclease P protein component identified by match to protein family HMM PF00825%3B match to protein family HMM TIGR00188 gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2046 HMPREF9243_2047 HMPREF9243_2047 rpmH rpmH 2073962 2074096 - ribosomal protein L34 identified by match to protein family HMM PF00468%3B match to protein family HMM TIGR01030 gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2047 HMPREF9243_2048 HMPREF9243_2048 HMPREF9243_2048 2074468 2075187 + pyridine nucleotide-disulfide oxidoreductase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF07992 pseudogene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2048 HMPREF9243_2049 HMPREF9243_2049 HMPREF9243_2049 2075244 2075879 + dihydrolipoyl dehydrogenase family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02852 pseudogene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2049 HMPREF9243_2050 HMPREF9243_2050 HMPREF9243_2050 2075990 2076976 + dehydrogenase E1 component identified by match to protein family HMM PF00676 gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2050 HMPREF9243_2051 HMPREF9243_2051 HMPREF9243_2051 2077010 2077999 + Transketolase%2C pyridine binding domain protein identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780 gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2051 HMPREF9243_2052 HMPREF9243_2052 HMPREF9243_2052 2078043 2079494 + 2-oxo acid dehydrogenase acyltransferase (catalytic domain) identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817 gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2052 HMPREF9243_2053 HMPREF9243_2053 HMPREF9243_2053 2079570 2080619 + hypothetical protein gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2053 HMPREF9243_2054 HMPREF9243_2054 rrsA rrsA 54850 56390 + 16S ribosomal RNA rRNA gene46 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2054 HMPREF9243_2055 HMPREF9243_2055 rrsB rrsB 469513 471053 + 16S ribosomal RNA rRNA gene470 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2055 HMPREF9243_2056 HMPREF9243_2056 rrsC rrsC 599385 600925 + 16S ribosomal RNA rRNA gene592 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2056 HMPREF9243_2057 HMPREF9243_2057 rrsD rrsD 1342392 1343932 - 16S ribosomal RNA rRNA gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2057 HMPREF9243_2058 HMPREF9243_2058 rpmJ rpmJ 524200 524313 + ribosomal protein L36 identified by match to protein family HMM PF00444%3B match to protein family HMM TIGR01022 gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=HMPREF9243_2058