HMPREF9243_0004    6261 ..    6279 + -10.3  -5.28176   TTGAAAGCAAATGAA             GCTGGGA CGACA TCCCAGC             TTTTTTATGGCTAAG 100 50
        yaaA NONE
        recF NONE
        gyrB    9954 ..    9964 +    -4  -2.71144   TTATAGAAAGGAAGG                 TTGA TAA TCAA                 TGGTTGAAGAACATA  45 35
        gyrA   12642 ..   12685 + -23.4  -5.96219   GTGCCTATAAAATGA GCCTGCGCCAAAAGTTGGTA AAAA TGACAACTTTTGGCGCAGGC TTTTTTTTGTGGGTC 100 61
HMPREF9243_0009 NONE
HMPREF9243_0010   15629 ..   15653 +  -9.4  -5.28983   AGTTTAAACAAAAAA          CCATGTAGGT AAAAA ACTTACATGG          TTTTTCTATTTTAGG 100 472
        rpsF   21362 ..   21372 +    -4  -3.25986   TTCTTAAGAGAGGGG                 TCAT TGT ATGA                 TTAATAATGTCGTCT  48 54
HMPREF9243_0017 NONE
        rpsR   22225 ..   22246 +  -7.3  -5.63517   AAAAGTTATAAAGGA           GGCTGTGAT AACT ATCGCAGTC            TTTTTTATTTGGCCC 100 42
HMPREF9243_0019 NONE
HMPREF9243_0020   23194 ..   23213 +  -5.7  -5.64274   TAAGAATTAGAAGAA            GTCTAGC CTGAGC GCTAGGC             TTTTTTTGTGGATAA  88 72
HMPREF9243_0021   27769 ..   27813 +  -7.5  -3.86015   TTATTATATAGGAAG GAAGATAATCAACATGGGAC AGTCAG GTTCT-TGTTGATTATTTTC TTTATCAGGAAAGTA  74 76
HMPREF9243_0022 NONE
HMPREF9243_0023 NONE
HMPREF9243_0024   30128 ..   30145 +  -5.5  -3.68979   AAGTGGAAGACAAGG             CCAAAGC TTGA GCTCTGG              TTAATTCTTTATTAG  60 39
        rplI   30727 ..   30747 +  -3.1  -3.13245   CTTTGAGAGCCAGGA            CCGGGGGAT TTC ACCCACTGG            CTCTTTTTCTTGTCT  47 52
        dnaB NONE
HMPREF9243_0027   32452 ..   32492 + -12.8  -5.10064   TCCATACTGAATAAA CAGCGCAATAGCAAGTCTT TGAA AAG-CTTGTCATTGCGCTG  TTTTTGTATCTTGAG 100 35
        fucO   34491 ..   34524 +  -4.6  -5.16237   AGGTTATCTTATACC     GCTTCTGTTGCA ACCCTCCCCA TGCGACAGGGGC      TTTTTTAATGGGATT  76 377
HMPREF9243_0031   38052 ..   38085 + -12.5  -4.21275   AAACGAAGCCTTACT     TGCCTGGCTCCCA CTCTCCTA TGGGGGCTAGGCA      TTTTCCATGGCTTCG  95 47
HMPREF9243_0035 NONE
HMPREF9243_0036   44247 ..   44283 +    -6  -4.74012   ATACAAGCAAAAAAA   CTGAGC-GCTTTCCT GGAAAATA AGGAAAGGAGCTCAG    TTTTAATTTTCTACT  78 60
HMPREF9243_0038   46388 ..   46407 +  -4.9  -2.94466   GAGCCGTTTAAAGTT            ACCCGAC ATCATG GTCGGGG             TGTAGTTAGTCCCTT  50 301
HMPREF9243_0040   48149 ..   48174 +  -6.1  -5.80951   ATCAGTATGATTACA         GGGGTTGTGGC TACG GTCATGACCTC          TTTTTTCTTTTGACT  93 458
HMPREF9243_0041 NONE
HMPREF9243_0042   49625 ..   49667 +   -18  -5.04597   TTCAGGGTCTTGTAG TGACCCCCAAAAGTTGGACT AAG AATTCAACTTTTGGGGGTTA TTTTTATGTCTAAAT 100 74
HMPREF9243_0043 NONE
HMPREF9243_0044   51264 ..   51285 +  -2.3  -5.21236   AGTCCAACTTATTGG           GGTCACCATA TCT TA-GCTGACC           TTTTTATTATGGATT  69 190
HMPREF9243_0046   53452 ..   53473 + -12.3  -3.32022   GAATGAATTGAGGGA           GAACCGGCT TTTG GGCCGGTTC            TTACTATATAAAGGG  89 49
HMPREF9243_0047   54831 ..   54853 +  -6.3  -3.79747   AAATGAGCTATTCAA           CGCTCATGA TTCTT TCATGAGAG           TTTGATCCTGGCTCA  63 431
        rrsA   56445 ..   56465 +  -4.7  -3.53563   TTTAGTTTTGAGAGG            TCTATCCAC ATG GTTGATGGA            TTTAACCGGGCCTGT  57 80
HMPREF9243_0048 NONE
HMPREF9243_0049   56654 ..   56673 +  -8.6  -3.04652   TCCCGCTATCCTCCA            TTGCAACG GAAA CGTTGCAG             ATTGTTCTTTGAAAA  70 24
        rr1A   59717 ..   59733 +  -9.5  -2.71708   CTAATCGGTCGAGGA              CTTATCC AAA GGATAAG              GTTGTATGAGGTTTA  72 22
        rrfA   59909 ..   59919 +  -5.4   -3.8165   TGTGAGACTAGGACG                 TTGC CGT GCAA                 TCTTATTTTATTCCG  60 17
HMPREF9243_0052   60026 ..   60036 +  -3.2  -2.56596   TTTAGGAATATTTTT                 GCTG CTG TAGC                 TCAGTTGGTAGAGCG  43 46
HMPREF9243_0053   60141 ..   60164 +  -6.1  -5.87996   AATGACTTAGTAAGG          GAGAATGTT TTCGTT GACATTCTC           TTTTTTTATTGATTA  93 66
HMPREF9243_0054 NONE
HMPREF9243_0055 NONE
HMPREF9243_0056 NONE
HMPREF9243_0057   63417 ..   63438 + -13.1  -4.88918   TTTATTTACTAAAAG           CGCTGGTAA GATT TTACCAGCG            TTTTATTTCGCCTGC 100 47
HMPREF9243_0058   64019 ..   64041 +  -9.1  -4.46926   AAAGACCCTAAAAAA           GGAGTCCCC TCATT GAGGACTCC           TTTTATGATGAAATC  90 359
HMPREF9243_0063   67724 ..   67738 +  -4.2  -3.12446   GTTCCTTCGGGTTCA               GAGGTT CGA ATCCTC               TTCCCTCCATTTCTA  51 2
HMPREF9243_0064   67839 ..   67864 + -14.1  -5.89947   CTACCCCAGTTAAGT         GAGACTGTACG AGTA CGTGCAGTCTC          TTTTTTTTGACTTTC 100 29
        nadC   69969 ..   69987 +    -9  -3.08679   AAAAATGAATCTGAA             TGATTAAG AGG CTTAATCA             TATTAAATAGAAAAA  70 267
HMPREF9243_0067   70799 ..   70841 +   -18  -5.04597   CCGGCTCCTTTGTAG TGACCCCCAAAAGTTGGACT AAG AATTCAACTTTTGGGGGTTA TTTTTATGTCTAAAT 100 84
HMPREF9243_0070   72686 ..   72725 + -15.2  -5.24799   ATGAAACGATAAGAA  GTCCTGCAAAGTACACTT AGTG GAGTATACTTTGCAGGGC   TTTTTCTGTTTATGA 100 437
        thiD   75165 ..   75187 +  -9.2  -5.53079   CTGTACACCGATAAG           GGTCATGATA GCT TGTCATGGCC           TTTTTTCTATATTTT 100 120
HMPREF9243_0076   78146 ..   78165 +    -5  -5.92399   ATTTACATAGAAAAA            GTGAGC CCCAAGCA GCTCAC             TTTTTTCTTTTATTA  91 53
HMPREF9243_0078   81783 ..   81794 +    -3  -4.08767   CTAATAAAGCAGGAA                TAGA TCCT TCTA                 TTTTACGAAGGTGGG  55 111
HMPREF9243_0080   83131 ..   83178 +    -3  -3.93136   TGATTACACATAAAC TTTAAACTTATCAAGAGC CGCTACGCTCTT CCTCTTGACAAGTTTAAA TTTCTGAGTAAATGT  52 41
HMPREF9243_0084   87922 ..   87939 +  -9.9  -4.62783   TAATACGAGTTTAGA             GTAGCGT CCTT ACGCTAC              TTTTTGCCCTGCCTA  91 306
HMPREF9243_0085 NONE
HMPREF9243_0086   90607 ..   90624 +  -5.5  -3.95502   ACTGAGGGGCTTTTT             GACTTGG TGAC CCTAGTC              CTTTTTCTTTTTCAG  63 140
HMPREF9243_0092   96055 ..   96088 +  -6.8  -5.46706   CGCGCAGAGTGATGA     CCGTTTCGTCCCTTT GATTG AGAGGG-CGGAATGG     TTTTTCTTTTGCCCT  93 322
        serS   97731 ..   97763 +  -7.8  -5.15634   TAGCTAAATACTAAA     CAGCTCTCTCAAGCT TAAT GGC-TGAAAGAGCTG      TTTTTTAGTCAAGTC  93 281
        msrA   98494 ..   98518 +  -7.9  -4.94222   GTAAATATTGAAAAG          TAAGCTGGG CTTAAGT CCCGGCTTA          TTTTTATGGCTTCTT  89 121
        ilvE   99971 ..   99993 + -12.1  -5.34555   TGATAATAAAAAGAA           CCGTCTACT GAAAA AGTAGACGG           TTTTTTGTCGTCTGC 100 153
HMPREF9243_0097  102312 ..  102340 +  -6.8  -5.54885   GAATAAGTTAGCCAA       GCCAGGTGTCTCT TCTT AGAGA-GCTTGGC        TTTTTTCTTAGTCTT  93 35
HMPREF9243_0098  102553 ..  102563 +  -3.2   -3.5361   TTCTCACAGTAATTG                 GCTA TAA TGGC                 TTATCTAAATAATTG  50 19
HMPREF9243_0099  102891 ..  102915 +  -7.2  -5.00616   CAGCTAAGACAAAAG          GCTTCCAC GTTTTTATA GTGGAAGC          TTTTTTGGAAGAAGA  85 52
HMPREF9243_0100  104354 ..  104368 +   -10   -4.9792   AATCAAAGATAAAAG               GGCAAG GCA CTTGCC               TTTTTATGTGAGATA 100 63
HMPREF9243_0101  104828 ..  104851 +  -8.8  -5.93252   GTTAAGGGAGGAGAG          CAGCCTGTCC ATTT GGGCGGGTTG           TTTTTTGTTTTTGGA 100 47
HMPREF9243_0102  106279 ..  106310 +    -8  -4.89477   TAATTATTTTTGAAA      GCAAGCGCCTGG TAATCAGC CTAGGAGCTTGC       TTTTCTTATTGAAAA  89 38
HMPREF9243_0103 NONE
HMPREF9243_0104  107248 ..  107272 +  -5.8  -5.03994   AATAAATACAAATTA          GGGAAATATT GTTAG GGTATTTCCC          TTTTTGTCTGTGACA  80 42
        rpiA NONE
HMPREF9243_0106 NONE
         tkt NONE
         fsa  112018 ..  112055 +  -8.6  -5.60689   ACCATAACATGAAAA   CACCTTTGTCGACTAAT AGAAA GTGAGTCG-CAAAGGTG   TTTTTTGTTGTCTAG 100 325
HMPREF9243_0110  113450 ..  113460 +  -2.6  -3.10164   TGACCAGCCTGAAGA                 TATT GAA AATA                 TTGAATGGTAGGTGA  43 4
HMPREF9243_0111  116378 ..  116403 +  -8.3  -5.16237   GCATGGTAAAGAAGA         GAGGTTGTGAC TTCG GTTGCAGCCTC          TTTTTTGATCCAGTT 100 195
HMPREF9243_0112 NONE
HMPREF9243_0113  117285 ..  117313 + -10.3  -5.06414   ATCACTCCTTCTAAA        GCCCGGTCTTC TTAGATT GAAGAGCGGGC        TTTTTATTAGGGAAA 100 102
HMPREF9243_0114 NONE
HMPREF9243_0115  119119 ..  119142 +  -8.8  -5.14563   CAAGCGCAAGAAGAG          AGAGCTGGGG TTTC CCTCAGCTCC           TTTTTTAATAGAAAA 100 292
HMPREF9243_0116  119966 ..  119999 +    -9   -5.1675   CAATAACAACAAGTC    GCGCTGAGT--CAGGA ATTT TCCTGTCGCTCAGCGC     TTTTTTAATGGGTAA 100 35
HMPREF9243_0118  122006 ..  122020 +  -2.8  -3.00766   AAAAACTAAGGAGGA               TCTATC AAT GACAGA               TGTATGTGAAATGTT  43 70
HMPREF9243_0119  123074 ..  123104 +  -3.3  -4.40358   ATCACTGGAGGAAAA      TACCATAAGCACAG GACA CTGTGCGT-TGGCA       TTTTCTGAAGTGACT  62 139
HMPREF9243_0120  124686 ..  124722 + -13.2  -5.04175   ACCAGTTTATAAAAA   CAGCTCCCTCTTAAGTG ATAG TACTT-AGGGGGAGCTG    TTTTTGTATGGTTAA 100 180
HMPREF9243_0122 NONE
HMPREF9243_0123  127776 ..  127793 +  -5.5   -4.2558   TCGTGGTAGACGTGG             CCGGGAT CGGT ATCCAGG              TTTTCATGGCCAATG  67 332
HMPREF9243_0126  130367 ..  130424 + -13.1  -5.06414   GAGAAATCCTGATAA CAAGGAAAAGACACAGAGAGCTGTT AAACAAAG AACAGTTTTCTGTGTCTTTTTTTAG TTTTTATTGGAAGAG 100 48
HMPREF9243_0129 NONE
HMPREF9243_0130 NONE
HMPREF9243_0131 NONE
HMPREF9243_0132  135825 ..  135864 + -10.9  -4.91712   ATGTAGAATTTAAAA  GGCACAGCAGTCCGCT AGTCATTGA AG-GGATTGCTGTGCC  TTTTTGTGAGTTGAA 100 70
HMPREF9243_0134  138990 ..  139011 +  -4.3  -5.40004   AAAATTGAAAATAAA           GGCTGAGAC GATG GTCAAAGCC            TTTTTTGATTTAGTG  81 39
HMPREF9243_0135  140018 ..  140045 +  -6.4  -5.63517   AATATGCAAATCTCA        GACGATAGAA AGTAATAA TTCTGTCGTC         TTTTTTATTTCAAAG  93 128
HMPREF9243_0138 NONE
HMPREF9243_0139  142143 ..  142153 +    -4  -2.90992   ACATAAGGAGCAAAG                 CTTA TGA TAAG                 TAATTTAAAAACATT  46 19
HMPREF9243_0140 NONE
HMPREF9243_0141 NONE
HMPREF9243_0142  145090 ..  145114 + -10.1  -5.27477   TATATAAGGCATTTA          GCGATTGAATT ATA AGTTCAGTCGC          TTTTTTAATTGAAAT 100 152
HMPREF9243_0143 NONE
HMPREF9243_0144 NONE
HMPREF9243_0145 NONE
HMPREF9243_0146  147079 ..  147089 +    -4  -3.83717   AAAAAGACACTTTAA                 CTTT TGA AAAG                 TATTTTAGATTTTTC  56 250
HMPREF9243_0153  154020 ..  154041 +  -6.6  -4.81249   AAGAGCATTAAACGA           GGAGTAGC CATAGC GTTACTCC            TTTTTACATTTACAG  80 61
         dcm  159682 ..  159695 +  -3.9  -3.16288   AGTGATTCACTTAAT               GAAAA TATA TTTTC                TCTTAGTCGAATTTA  48 423
HMPREF9243_0162  167784 ..  167799 +  -2.5  -3.31322   TAAGAAAACACGCTG              GCTCT TTAATT AGGGC               TTATAAAAACTTGAG  46 38
HMPREF9243_0163  167937 ..  167950 +  -2.3  -3.16668   AATTATGACAAGCAA               GACGC CTGT GCGTG                TTGCTGAAGATGTTG  43 76
HMPREF9243_0166  169959 ..  169976 + -11.3  -5.14819   AGAAAGATAAATATC             GGCAGTC TTCG GACTGCC              TTTATTTTTTGGTTT 100 31
HMPREF9243_0167  171280 ..  171317 +    -5  -4.18197   TTGAGTACGAAAATT   GGGTCAAAAACAGGCTA AAAAA TA-CCGTTTTTTGACCC   TTTTAAATAGGGCAT  65 97
HMPREF9243_0168  172388 ..  172420 + -15.1  -3.44686   ATAAATTAAAAATAA      TTAAGCGTTCTCTAA CTT TAAGAGAACGCTTAA      TCTTATTACATTGAA 100 37
HMPREF9243_0169 NONE
HMPREF9243_0170 NONE
HMPREF9243_0171  173770 ..  173783 +  -3.8  -4.43477   TCTTAGTATAATGCG               GACC AAGTCG GGTC                TTTTGATTGCATAAA  63 75
HMPREF9243_0174  178648 ..  178658 +    -4  -3.41587   GATTTAAAACGAGTA                 TTTG GAT CAAA                 TTGAATTTTATGAAG  50 210
HMPREF9243_0175  180203 ..  180215 +  -2.7  -2.55606   CCATTTTATTGGAGG                TAGTG AAG CATTA                GTTAATAATCTCTAA  41 12
HMPREF9243_0176  182917 ..  182940 +  -6.8  -5.80364   TGTTCTTTATTTAAA          GAATACTCTT GCAT AAGGGTGTTC           TTTTTTTCTTGCAAT 100 121
HMPREF9243_0182  188055 ..  188082 +  -9.3  -5.60993   ATATTGGCATTTATT        GACTGAAAGAA TTTATT TTCTTTCGGTC         TTTTTTTATGCCCAG 100 164
HMPREF9243_0185  189347 ..  189384 +  -4.3  -3.27406   TAAGTGGTAGAAGAA   CTCCTTAATGACTATTT GCCC AAATACAAATTAAGGAG    GTTTTGTGATGGAAA  51 80
HMPREF9243_0186  191518 ..  191528 +    -4  -2.94416   TACTCTTAAAAATAT                 TATC AAC GATA                 TGTATGCTAAGGATA  47 480
HMPREF9243_0189  194222 ..  194241 +  -8.6  -4.28774   TATGGAAGTAGCAAA            GGGAGTGA GCAA TCACTCTC             TTTTAAATTACATAA  83 30
HMPREF9243_0190 NONE
HMPREF9243_0191  196406 ..  196436 + -10.5  -4.11623   CTAAAATCAATAAAA       TCGCCTCTGCT AGCTGATTG AGCAGGGGCGA       TTTACTTTAGTAATG  89 37
        hsdR NONE
HMPREF9243_0197  203143 ..  203174 + -13.2  -4.77165   AAAGTAATTCAAGAA      GGGCAGGCCA-TTTA TAG TAAAGTGGCTTGCCC      TTTTATTATAGAACC 100 104
HMPREF9243_0199 NONE
HMPREF9243_0200  205238 ..  205258 + -10.5  -4.77567   CATAGCGACCTTTAA            GCATCTACA TCT TGTAGGTGC            TTTTCTTATGCACAT 100 36
HMPREF9243_0201  206942 ..  206954 +  -7.7  -4.67123   CGAAGGGGTTGCTCG                GGGAA TAT TTCCC                TTTTGGTTGTTTTGC  84 255
HMPREF9243_0202  207865 ..  207901 +  -8.8   -5.2291   GAAACCACACAAAAA   CACCGTTCCA-CCGG CTTTTATT CCAGCTGGAACGGTG    TTTTTCTTATACTCT 100 127
HMPREF9243_0205 NONE
HMPREF9243_0206  210707 ..  210749 +   -18  -5.04597   TTTTAGCGATTGTAG TGACCCCCAAAAGTTGGACT AAG AATTCAACTTTTGGGGGTTA TTTTTATGTCTAAAT 100 58
HMPREF9243_0207 NONE
HMPREF9243_0208  212197 ..  212244 +    -3  -3.93136   TGATTACACATAAAC TTTAAACTTATCAAGAGC CGCTACGCTCTT CCTCTTGACAAGTTTAAA TTTCTGAGTAAATGT  52 41
HMPREF9243_0209  213099 ..  213116 +  -4.8  -5.36441   TGAATTTTTTCACTG             GCTCAC CTTTGC GTGGGC              TTTTTTGTGTCGGGG  84 54
HMPREF9243_0210 NONE
HMPREF9243_0211  213710 ..  213726 + -11.5  -5.60993   GGATTGACCTCCCAA              GCCCTGC CTA GCGGGGC              TTTTTTTATGAGAAA 100 46
HMPREF9243_0212 NONE
HMPREF9243_0213 NONE
HMPREF9243_0214  215150 ..  215167 +  -9.1  -5.54192   CGGTAGAGGAGGAAA             GCAGCCT GTAG GGGCTGC              TTTTTTTGAGTTAAT 100 46
HMPREF9243_0218  217739 ..  217774 +   -12  -5.07652   ATACTGTATCATGTT    TGGCGCCAAAACCT AGTAAATG ATGTTTTGGCGCCA     TTTTATTTTAAGGAC 100 62
HMPREF9243_0219  218754 ..  218783 + -12.3  -4.91459   TGAAAACATGAAGAA       GCCTTACTTGAAA ATGA TTACAAGTAAGGC        TTTTTGTGACTGTTA 100 97
HMPREF9243_0220  221057 ..  221084 + -11.4  -5.58074   GGACTAGCAATTAGA        CAGTTCTCCTTA CGAT TAGGGGGAACTG         TTTTTTTAATAGTTC 100 48
        aroE NONE
HMPREF9243_0223 NONE
        aroD  225189 ..  225211 +   -12  -4.56597   TCCATGCAAGTAAAA           GCCGCTTTCT TAT GGAGAGCGGC           TTTTTGGGGAAGGAG 100 41
HMPREF9243_0225  226601 ..  226633 + -12.9  -5.48054   CGGTATAAAGAATAA      CCGATAAGTACTG AGCGAAG CGGTACTTATCGG      TTTTTTAGTTTTGAT 100 33
HMPREF9243_0227 NONE
HMPREF9243_0228  228284 ..  228301 +  -6.3  -2.77962   GTGCCAGTGGAAGAA             CGCCCTAT GTT AT-GGGCG             GTTTAAAATATGCCA  55 468
HMPREF9243_0231  230595 ..  230605 +    -4  -3.14881   TTTAGATCAAATTAT                 TCAT CTG ATGA                 TTAATGCACCGATTA  48 399
HMPREF9243_0233 NONE
HMPREF9243_0234 NONE
HMPREF9243_0235 NONE
        pdxB  235839 ..  235870 +   -11  -4.20531   CTTCCAATGAAAATA      GGCCTATGATGA AAGGAAAG TCGTCATAGGCC       TTTTAAGTCGATCTG  90 71
HMPREF9243_0238  238002 ..  238038 + -10.9   -5.1523   ATAATAATTTTTATA    CCACTCCAAATGCCT TCAACAC GGGCGATTGGAGTGG    TTTTTATATTCTCCA 100 94
HMPREF9243_0239 NONE
        hxlA NONE
HMPREF9243_0241 NONE
HMPREF9243_0242  241331 ..  241345 +  -7.1  -2.74144   CTTTATCAACGGGTA               CAGCG ACAGA CGCTG               GTTTAGAAATCACCA  60 487
HMPREF9243_0245  243078 ..  243097 +  -7.2  -5.27335   ATAGAATCCTTAAAA            TCACTTCA GTCA TGGAGTGA             TTTTTCTTTGCCAAA  95 47
HMPREF9243_0246 NONE
        manA  246482 ..  246518 + -18.2  -4.07533   TATTCTAATGAAATA    GGGAACCTATAGATGC AATAA GCAACTATAGGTTCCC    TTATTCTATTCTTTT 100 324
HMPREF9243_0249 NONE
HMPREF9243_0250 NONE
HMPREF9243_0251  251244 ..  251265 +  -4.4  -3.33922   GGTAATGCTGAATAC           TGATGCGC ATATTC GCTCATCA            ATTTTTGGAAGCAAT  53 380
HMPREF9243_0255  252265 ..  252275 +  -5.4  -3.38991   TTAAATCATCTTGGG                 CTCA ATG TGAG                 TATTATTGGAGAAGT  57 217
HMPREF9243_0258 NONE
        deoC NONE
         tkt  257643 ..  257669 + -13.2  -3.06696   GGAAGTATCGATATA         TCGCATTATAGA TTT TCTATAATGCGG         TGTATTGGAAAAAGG  93 48
HMPREF9243_0262  258443 ..  258457 +  -4.4  -2.80016   TAAAATAGTAGTTAA               TTTATT AAT AATAAA               TACTTAATGATAGGA  48 33
HMPREF9243_0263  259911 ..  259953 +   -18  -5.04597   ATTATCGTTTTGTAG TGACCCCCAAAAGTTGGACT AAG AATTCAACTTTTGGGGGTTA TTTTTATGTCTAAAT 100 103
HMPREF9243_0264 NONE
HMPREF9243_0265  261575 ..  261592 +  -5.6  -3.57039   TTCGACTGTTTTTTA             TGGGAA TTATTT TTCCCA              TTCTACTTCTCACTC  58 215
        gatY NONE
        tpiA NONE
HMPREF9243_0270 NONE
HMPREF9243_0271 NONE
         gnd  267430 ..  267446 +  -2.9  -3.76775   ACAACTATGTTAGCC              CCCTGTT TAC GACAGTG              TTTGGCTATATTGAG  50 351
         eda NONE
        pdxB NONE
HMPREF9243_0277 NONE
         gnd NONE
HMPREF9243_0279 NONE
HMPREF9243_0280 NONE
HMPREF9243_0281 NONE
HMPREF9243_0282 NONE
        pdxB  275230 ..  275242 +  -4.8  -2.85579   CATGTCCAATTAAAG                CCCT ATGCA AGGG                ATATTTTGGATTATT  50 345
HMPREF9243_0285 NONE
HMPREF9243_0286  276555 ..  276592 + -10.1  -4.79756   AATAAACAATATAGT   TTCCCTTAAGTTGGA CTTGATGT TCTAACTTAGGGGAA    TTTTTAGGTTCTATA 100 64
HMPREF9243_0287  277482 ..  277521 +  -3.2  -3.92996   AAGAGCCGGGTGTAA CTTTTCATT-TGAT-AGG CCCAGC CCTGATCAGAATGAAAGG  TTCTTCTGTATGGAC  55 323
HMPREF9243_0290  279938 ..  279954 +  -5.3  -2.98223   TAGCATTCCTATCCA              TTATATA GTT TATATAA              TATATGATATCCATA  53 258
HMPREF9243_0291 NONE
HMPREF9243_0292 NONE
HMPREF9243_0293 NONE
HMPREF9243_0294 NONE
HMPREF9243_0295 NONE
HMPREF9243_0297 NONE
HMPREF9243_0298  287399 ..  287426 + -11.3  -5.47821   GAAGATAAACACTAT        GACCGAGTTGG GTGATA CCAACTCGGCC         TTTTTTTGAGTGACT 100 191
HMPREF9243_0299  288957 ..  288992 +  -7.8  -4.03413   ATTGAATAGACAGAG    GAAAAGGTTAAGGA AGGTTTTG TCTTTAGCCTTTTC     TTTATATGAAAGAGT  76 51
HMPREF9243_0300  291120 ..  291131 +  -4.4  -3.07915   AAAAACAGCGTGTCT                CTCT GGGA AGAG                 CTTTGGTTTCTGGCC  50 445
HMPREF9243_0305  294236 ..  294247 +  -4.4  -3.78124   GCTAGTTAAGGAGTG                GTGT TATG ACAC                 TTGTTGATCGTTGGT  57 36
HMPREF9243_0306 NONE
HMPREF9243_0307 NONE
        srlA NONE
HMPREF9243_0309 NONE
HMPREF9243_0310  298660 ..  298700 + -11.9  -4.29656   CAAACCAACAAAAAA CCAGCGCC-CCCTAAGCT CATTCA AGCTTTGGCAGGCGCTGG  TTTTAGGCTTTTATG  93 113
        fldA NONE
HMPREF9243_0314  302459 ..  302482 + -11.1  -4.77165   TGACAAGCGCAAAAA          GGACTAGGA AATTTC TCCTAGTCC           TTTTCTTGTAGCAAA 100 164
HMPREF9243_0317  306372 ..  306405 +  -2.5  -5.44119   ACTATTGGAAGAATA     AGGCGTAAAAATTCTC AAG GAGAATTTGT-CGTCA     TTTTTTTGAAATGGA  77 74
HMPREF9243_0318  307530 ..  307540 +  -3.2  -3.54488   AGTAGGCAGTAAATC                 CTCA AAA TGGG                 TCTTCTTTGAAAAAA  50 131
HMPREF9243_0319  307802 ..  307838 + -12.3  -4.77173   AGCCTAAACTTAAAA    ACAAGCCCGGGAGCT TTTGATT GGCTCCTGGGCTTGC    TTTCTTTTCTGGGAG 100 40
HMPREF9243_0323  311873 ..  311894 + -10.1  -5.67063   GTCAAATTCATTAGA           GTCGCTGGC AAAA GTCAGCGGC            TTTTTTTGTGGTGGC 100 80
HMPREF9243_0324 NONE
HMPREF9243_0325  314726 ..  314738 +  -3.4  -3.90291   AATTGATGATGAAGG                GGAA AGCTA TTCC                TTTACTTGGCCAGGT  55 194
HMPREF9243_0328  319698 ..  319722 +  -5.8  -5.27335   GAATTTTAATAGTAA          TGTCATATCT CACAA AGGTATGGCA          TTTTTATTTGCACCG  89 149
HMPREF9243_0330  321083 ..  321100 +  -2.7   -2.9294   TGAATTGCCAATCAG             GGCT-GGT TTC ACTTAGCC             TATCTAGCTAATATC  42 89
HMPREF9243_0331 NONE
HMPREF9243_0332  321849 ..  321887 +  -8.3  -4.64598   AAAGATAGCTTAAAA   GGCTGATCCTTTTCT AGATGATGA AGAAAAGAGTCAGCC   TTTTTGAGATCCTTG  88 66
HMPREF9243_0334 NONE
HMPREF9243_0335  324136 ..  324148 +  -3.3   -4.3534   ATTGGGGTCACCATA                GAGCC TTG GGGTC                TTTTAATAATTGCCA  59 200
        uvrA  327973 ..  327998 +  -9.7  -5.07486   AACATTTATGTTTAA         ACGAGCTCTCC AAGT GGAGAGCTTGG          TTTTTCTTGAGAGTG 100 43
        sbcD NONE
HMPREF9243_0339  332803 ..  332816 +  -5.3  -3.53563   TTTATATCTTAGTAG               CGATT TCTC AATCG                TTTGAACAGCGGTAT  58 424
HMPREF9243_0340 NONE
HMPREF9243_0341  333634 ..  333655 + -10.9   -5.5604   TATTAATCGTTAAAA           GACTGCGAC GCCT GTTGCAGTC            TTTTTTCTTAGTTAG 100 75
        hprK NONE
         lgt NONE
        gpsA  336893 ..  336911 +  -3.1  -2.73364   ATTAAGAGAAGAGAC             TAGTGAC CAACT GTCACAA             TAATTACCGTGAAGA  43 135
        galU NONE
        trxB  338929 ..  338950 +  -6.6    -5.626   TGAATGCTTATTAAA           CTAGGTGA ATCATC TCGCCTAG            TTTTTTTCTGCCCTC  93 105
HMPREF9243_0350  350287 ..  350321 +   -13  -5.63517   ATTAGTTAATTCCTT     TACCTCTTGGTCTCTT GAT GGGAGACTAAGGGGTA     TTTTTTATTTCAAGC 100 42
HMPREF9243_0351  352317 ..  352341 +  -7.8  -4.36127   CAATGATTTAAAAAA          GGAGCTGGGA ATGGA TCCCAGCCTC          TTTTGCCTTATTGAC  82 114
HMPREF9243_0352 NONE
HMPREF9243_0353 NONE
HMPREF9243_0354  355743 ..  355793 +  -7.1  -5.95449   CAAGCTGAAATAAAA TCTTGGCAAGTTCCCTTTTAGTCA CAGT TGACTAGGAAG-AGCTTACCAAGA TTTTTTATTTTCTTT 100 396
HMPREF9243_0355 NONE
HMPREF9243_0356  358327 ..  358369 +  -9.3  -4.81249   ACGAATGATTAAATC AATACAGCCAGCTGA-CTTT TCTA AAGGCTCAGCTGGCTGTCTA TTTTTGGCTTTAAAC 100 205
HMPREF9243_0358 NONE
HMPREF9243_0359 NONE
HMPREF9243_0360  361339 ..  361349 +  -4.6  -2.62714   TGGATTAGTGGGGAG                 TGGG ATG CCCG                 ATGATTTTTCTTGGC  47 11
HMPREF9243_0361 NONE
HMPREF9243_0362  363384 ..  363404 + -13.3   -5.5604   GACTTTATATATAGT            GAGTTGGCC TTT GGCCAGCTC            TTTTTTGTTGCTTAC 100 233
HMPREF9243_0365  366894 ..  366917 +   -11  -3.57185   TTGAAAAGCATAACA          GCCATCCCAT GATC GTGGGGTGGC           TATTCTTTACCTAGC  84 109
HMPREF9243_0366  367392 ..  367414 +   -12   -5.9003   TAGGAAATAGAAAAG           CCGACGCTCT TCG AGAACGTCGG           TTTTTTTGTTGGTTT 100 157
HMPREF9243_0370  370850 ..  370866 +  -5.8  -3.79633   TTACAGATATAGTAT              GCCTAG CTCTT CTGGGC              TCTTTTGACTTTGTC  63 128
        ptbA NONE
        gltX  373144 ..  373169 + -10.5  -5.67711   GAATTTAGTAAAAAA         CTTAGCTGCCT GATG GGGTAGCTAAG          TTTTTATTTTGTTTA 100 43
HMPREF9243_0373  373585 ..  373601 +  -2.9  -3.06696   TGTGTTACGTGAGCA              CCTGC TAGCCAT GCGGG              TCTATTAGAAAGAAG  43 1
HMPREF9243_0374 NONE
HMPREF9243_0375 NONE
HMPREF9243_0376 NONE
HMPREF9243_0377 NONE
HMPREF9243_0378 NONE
HMPREF9243_0379 NONE
HMPREF9243_0380 NONE
HMPREF9243_0381  381158 ..  381177 +  -8.6  -6.01725   ATTCAAGCTGTTGAA            GCATTCTC TTTG GAGGATGC             TTTTTTATTTTTCTT 100 46
HMPREF9243_0382  382708 ..  382724 + -10.1  -5.14563   TAATGAACTAGGAAA              GAGCGGT TCA GCCGCTC              TTTTTTGATGGAAGA 100 103
HMPREF9243_0383  384350 ..  384369 +   -10  -5.79595   GTGACGAGCGCTCCG            GGCTGGGA GAAA TCCCAGTC             TTTTTTGTTTTAGGC 100 215
        pncB NONE
        nadE  386935 ..  386957 +  -6.3  -5.46657   ATAAAGAATGGAAGA          GGCTGCTGAC TAAG GTCAG-GGCC           TTTTTTCTTGGCCTG  91 45
        cysS NONE
HMPREF9243_0387 NONE
HMPREF9243_0388 NONE
HMPREF9243_0389 NONE
HMPREF9243_0390 NONE
        secE  391733 ..  391749 +  -4.4  -5.37593   CAAGTAAACAAGGAC              CTTTCC CTAGC GGAAGG              TTTTTTCATTTAGGA  81 104
        nusG NONE
HMPREF9243_0393  392663 ..  392679 +  -7.3  -2.99207   TTAAAATATCACTTG              CAAAGCG TGT TGCTTTG              TGCTTTAATAATGTA  62 37
        rplK NONE
        rplA  394046 ..  394071 + -11.9  -4.87893   AATGAATAAAGAAGA         GAGTCTGGGAC AAAA GTCTCGGACTC          TTTTTGCTTACAATT 100 44
        rplJ  395188 ..  395207 +  -4.2  -4.30416   GATGCTCCAGCTGAA            GCAGCTGA ATAA TCAGTGGC             TTTTAGCTTAATGAT  63 14
        rplL  395658 ..  395681 + -10.4  -5.80364   TCTTAATGATGAAAA          GAGTTGTAAC ATCA GTTACAGCTC           TTTTTTTATTAGAGT 100 44
HMPREF9243_0399  397174 ..  397190 +  -8.7  -5.24129   ATAAGATATACAGAA              GTGTCTC TAG GAGGCAC              TTTTTTCTAAACAAA 100 75
HMPREF9243_0400 NONE
HMPREF9243_0401  399335 ..  399360 +  -8.4   -5.1861   AAAGTAAAGCAACAA         GCGATGGT-AG AAAAC CTGACCATCGC         TTTTTTACTGGTAAA 100 45
HMPREF9243_0402  400324 ..  400366 +   -18  -5.04597   ACACCGCTTATGTAG TGACCCCCAAAAGTTGGACT AAG AATTCAACTTTTGGGGGTTA TTTTTATGTCTAAAT 100 141
HMPREF9243_0403 NONE
HMPREF9243_0404  401814 ..  401861 +    -3  -3.93136   TGATTACACATAAAC TTTAAACTTATCAAGAGC CGCTACGCTCTT CCTCTTGACAAGTTTAAA TTTCTGAGTAAATGT  52 41
       opuAA  403565 ..  403577 +  -6.9  -3.44444   TACTTTGCCACCAAC                CGCCG CTT TGGCG                TTCCTGTCTTTGTCC  65 234
HMPREF9243_0408  405742 ..  405768 +  -5.9  -5.36314   GCCTTCATTCGATGA         GAAGTTGGGAC TGAAC GTTCTGACTTC         TTTTTTCATATTTTA  89 53
HMPREF9243_0409 NONE
HMPREF9243_0410  407501 ..  407521 +  -4.7  -5.26119   TCAATGAAATAAAAA            GGTTAGG TTCTTGC CCTAGCC            TTTTCTTTTTGAAGG  84 52
HMPREF9243_0411  408666 ..  408693 + -10.7  -5.10163   ATGGAAAAGTAAAAA        CCAGCAGGA-GT TCACT ACATCCTGCTGG        TTTTATTTTGCGCTT 100 49
        rpoB  413410 ..  413422 +  -7.7  -3.54638   GAAGTTTGCAGTAAA                TCCTC AAA GAGGA                TTTGCAAGGACTTCT  69 78
        rpoC  417468 ..  417495 + -13.6  -4.90869   ACCACTGCAAGTTAA        GCAACAGCACTA TATA TAGTGTTGTTGC         TTTTTAATTGATACT 100 133
HMPREF9243_0415  420268 ..  420292 +  -9.4  -4.86033   TTACCCTTTAAAAAA          GTCACTAAGT TTTTT ACTTAGTGGC          TTTTTATCACCATTT 100 55
HMPREF9243_0416  420976 ..  420993 +  -9.1   -5.4833   GTATTTATTAACCAA             GCTGGGA GAAA TCCCGGC              TTTTTTATTGAATGA 100 50
HMPREF9243_0418  421926 ..  421939 +  -5.9  -2.87253   ACAAGCAGAATGTCG               GGGGT TCGA GCCCC                TCATTCTCCATTATG  55 0
HMPREF9243_0419 NONE
HMPREF9243_0420 NONE
HMPREF9243_0421 NONE
HMPREF9243_0422 NONE
HMPREF9243_0423  422429 ..  422443 +  -4.9  -5.54338   CCGACTCGATGGAAA               GCGTC AGTAA GGCGC               TTTTTATTTTACTTA  88 36
HMPREF9243_0424  422573 ..  422588 +  -6.8  -5.92399   AGAACAAGCCTTCTA              GCGGTC TTTG GATCGC               TTTTTTATTTTCTTG  93 50
HMPREF9243_0425  423315 ..  423334 +   -10   -5.4251   ATTAAACGAAGAGAG            GCTGGGAC AAGG GTTCCAGC             TTTTTTCTATCTACA 100 43
HMPREF9243_0426 NONE
HMPREF9243_0427  425899 ..  425926 +  -7.7  -5.63517   TTGCGCTAGAGCCTT        GACCTTGTTCC TTACTT GGGGCAGGGTC         TTTTTTATTTGGGGG 100 32
HMPREF9243_0428  427229 ..  427268 +  -6.7  -2.97885   ACTAGGTCAAAGCCT  GATGAGGTC-GCTATT AGTGAATTA AATAGTTGACCTCATC  CCTTTTTTTGCTTAT  60 36
HMPREF9243_0429 NONE
HMPREF9243_0430  430365 ..  430375 +  -3.2  -2.78384   AAGAAGACTTTATAT                 CGCT TTT AGTG                 TATGATAAAGACAAG  44 45
HMPREF9243_0431  430678 ..  430701 + -11.8  -5.46657   TCCTTTACTTAAAAA          GCGGTGATGAC GCG GTCATC-CCGC          TTTTTTGTTAGGGTG 100 79
HMPREF9243_0432  431954 ..  431982 + -11.8  -3.57792   AAGCGATGTGAATTA       CGGCTAGT-TGGC GCTA GCCGTACTAGCCG        TTTGAAGCTCGCTAG  87 175
HMPREF9243_0433 NONE
        srpB  432781 ..  432800 +  -8.6  -5.45802   ATGCACTTATTCAAG            GTTGGGAC AGAA GTTCCAAC             TTTTTATTTTCAAAA 100 32
        dnaX NONE
HMPREF9243_0436  435211 ..  435263 +    -3  -3.54459   TCTAGGAACTTGCTT TAAGGAGTGGGGAAG-CT-CAGGC CCAAGCA GTCTGAAGATTTTCCCACTTTTTA TTTAGAAGGAGTTGA  48 36
        recR NONE
         tmk NONE
        holB  437576 ..  437611 +   -12   -4.9792   TAAAGCAGAGAAAAA    GTGCTCCTGGTAAGTT CAAA AATTTGCCAGAAGCAC     TTTTTGTATAGGATC 100 13
HMPREF9243_0441 NONE
HMPREF9243_0442  440125 ..  440144 +  -5.6  -4.91109   AGCCGGCGACCCTGT            GCCATGGT CTTT GCCAAGGC             TTTTTCTAGTCGCCA  78 174
HMPREF9243_0444  441208 ..  441220 +  -9.1  -3.18788   CTACCATGAAATCGG                TGGGG AGG CCCCA                TGATTTTCTACCTAG  71 10
HMPREF9243_0445 NONE
        mscL  442718 ..  442745 + -12.8  -5.60556   GTAGGCAAATAAAAA        GCGAAGCTAGTC CAAT GGCTAGTTTCGC         TTTTTGTTTTATATT 100 88
HMPREF9243_0449  446338 ..  446363 + -11.2  -5.52986   GCATAAGCTAAAAAA         GCCTTC-CCGC ATCAA GCGGGGAAGGC         TTTTTTTACTAGAGT 100 81
HMPREF9243_0453 NONE
        rpoE  449959 ..  449984 + -13.3  -4.56597   GACTAAAGTTAAGAA         GAGCCTGAGAC AAAA GTCCCAGGCTC          TTTTTAAAACACGAA 100 62
        murA NONE
         rho NONE
        rpmE  453502 ..  453525 +  -9.6  -5.76633   TAAGATTACAAGAAG          GAGCTTGCCA TTCA TGCCAAGCTC           TTTTTTTATGTCTGG 100 41
HMPREF9243_0458  454424 ..  454451 + -12.1  -5.32944   CCCCAACATAAAAAA        CTGCCTCCTGTC TATTT GACAGG-GGCAG        TTTTTTGATTGTCGC 100 65
HMPREF9243_0460  456353 ..  456364 +    -3  -3.35775   GGTCGATTAAAGAAC                TTTC GAAC GAAA                 TATTTGGAGGCTAAT  46 0
HMPREF9243_0461 NONE
        murF  458921 ..  458944 +  -7.5   -5.1861   ACACCAAGAACATAA          GAGCTCGCCT TATGC AGGCGA-CTC          TTTTTTAATAATAAG  93 102
HMPREF9243_0463 NONE
        acpS  460879 ..  460915 + -12.4   -5.5112   AGAAGAATAAAGAAA   CTGCAGTCT-CTGGCAG GATT TTGCCAGTGGGCTGCAG    TTTTTTGTTAGTAAA 100 31
HMPREF9243_0465  461667 ..  461692 + -11.9  -4.56597   GAAGAATAAAATAGT         GAGCCTGGGAT AACA GTCCCAGGTTC          TTTTTAAAACACGAA 100 13
HMPREF9243_0466 NONE
HMPREF9243_0468  463955 ..  463972 +    -7  -5.52384   GAATTTGTATTCGAA             GCTAGG CTTTGT CCTAGC              TTTTTTTAATCCAAG 100 55
HMPREF9243_0469 NONE
HMPREF9243_0470 NONE
HMPREF9243_0471 NONE
HMPREF9243_0472  467143 ..  467168 + -14.8  -5.24129   TTCGTGTTTTAAAAA         GAGCCTGGGA ATTTTG TCCCAGGCTC          TTTTTTATAGAAAGG 100 383
HMPREF9243_0473  468721 ..  468736 +  -3.3  -4.09292   GATGAATTGTCTTGG              GCTTT CTTCAT AAAGC               TTTCCTTATTAACTT  57 107
        rrsB  471102 ..  471117 +  -4.7  -3.63464   TCTTTGTTTAGTTTT              GAGAG GTCTAA CTCTC               TATTGTTCTTTGAAA  57 74
        rr1B  474162 ..  474178 +  -9.5  -2.71708   CTAATCGGTCGAGGA              CTTATCC AAA GGATAAG              GTTGTATGAGGTTTA  72 22
        rrfB  474372 ..  474391 +  -8.6  -5.97575   CCGTGCTAACAAGGA            GTCATTCC AATA GGAATGGC             TTTTTTTTGTAGCTT 100 35
HMPREF9243_0477  475190 ..  475203 +  -2.5  -3.30452   GAATAAATATCTAAG               TAAAA AGCA TTTTA                TTAGTCGTCTTCTTC  46 35
HMPREF9243_0479  476703 ..  476726 +  -4.7  -5.80951   AAGTCTCTGGAAAAG          GGTGTC-AAT GTTGG ATTGGACACC          TTTTTTCTTTTAGCT  91 73
HMPREF9243_0480 NONE
HMPREF9243_0481 NONE
HMPREF9243_0482 NONE
HMPREF9243_0483  480434 ..  480457 +  -7.5  -5.32699   AAGTGTAAAGAAAAA          CGGAGTAAGC CTCAA GCT-ACTCCG          TTTTTTGCTATTTAA  95 45
HMPREF9243_0485 NONE
HMPREF9243_0486 NONE
        glmU NONE
         prs  487593 ..  487627 + -13.6  -4.72029   ACTAGTAGCAAGTCA     TCTGTACATCTCCCTC GCT GTGGGCGGTGTACAGA     TTTTGTTGCGTTAAA 100 163
         pth NONE
         mfd NONE
HMPREF9243_0491 NONE
HMPREF9243_0492 NONE
HMPREF9243_0493 NONE
HMPREF9243_0494  494752 ..  494777 +  -8.3  -4.96845   AAAAGATTTTACCAA         GAGGTTATGAC GCTG GTCACAGCCTC          TTTCTTTATTTTTAT  95 63
        tilS NONE
         hpt NONE
        hflB  499107 ..  499130 + -12.4  -5.15634   TCGGTTAAGTAATCG          GGACTGCGCC AAAA GACGCAGTCC           TTTTTTCATGAGCTA 100 52
        hslO  500078 ..  500097 +    -2  -2.92878   TTGGAAAAACTTCTA            GAGGAGGC CGAA GCCTAGTC             CTTTACCTTTAGTTG  41 8
HMPREF9243_0499  501367 ..  501390 +  -4.4  -4.78839   TTGCATTTAGAAAAA          GGGCTGGGGC TTTT GTCTCTGCTC           TTTTCTTCTGCCGTT  71 360
HMPREF9243_0500  502538 ..  502548 +  -4.6  -3.94812   AAGACCAAAAAGCAT                 GCCT GAA GGGC                 TGTTTTTAAATAGAA  59 60
        lysS  504140 ..  504175 + -10.6  -5.85737   CCGTCGTAGCTAACG    GCTGCTTGATTTTCACC TAT GG-GAAGATGAAGCAGC    TTTTTTTATTGATAT 100 70
HMPREF9243_0502  505999 ..  506022 +  -6.8  -5.18355   TTAACTATAATGAAA          GGAAAGTC CCTAAGTT GACTTTCC           TTTTTACTTTTTGAC  86 37
        rpsL NONE
        rpsG  507207 ..  507242 +  -4.8  -3.24924   CTGGTAATAAATTTT    CCTGCTTTATTAGTGGA AAA TTC-CTAGTACGGCAGG    TATTATAAGTGAGGA  53 34
        fusA  509422 ..  509458 +  -6.1  -2.91452   AAAATCAAGGAAAGA   TGAGGTAGAGTCCTTGA CTTTA TCAAGG-C-CTATCTCA   TATAATTAAACTACT  55 53
         tuf  510739 ..  510754 +    -9  -6.09196   ACATGCCAAGAAAAA              GAGCTC ATCC GAGCTC               TTTTTTTATTTTAAA 100 49
HMPREF9243_0507  512359 ..  512394 +  -7.7  -5.07275   ATATATAATAGAAGA    GAAACCGAGTCTT AGCAGATAGA AAGTCTCGGTTTC     TTTTTGTCTATCTAA  93 77
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC  516872 ..  516889 +  -3.5  -3.04144   AAGAGGAGGAATAAT             CGTGTTAG TAC CTAA-ACG             TGTTAAACATAGACG  45 27
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX  518541 ..  518554 +  -3.9  -2.71791   AAGGAGGAACTAACA               GATTA TGGC TAATC                ATTTAAAAGAAAAAT  45 47
        rplE  519185 ..  519198 +  -3.8  -3.26031   CACGTTGTGAACGCT               GTGG CAGACC CCAC                TCTGTTTACCGTAAG  48 123
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
HMPREF9243_0529  523844 ..  523868 +  -3.6  -3.73122   AACCGCATTTCTGAA          GTTATCGAAG ATTAG CCTTGATAAC          TATTCTTTGTTGTGG  54 11
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK  525122 ..  525144 +  -2.9  -3.25088   TCCTCCAAAACGTCG          TCGTGTTTAA TATT TTAAA-ACGA           TTGATGCATTTGGAC  45 16
        rpoA NONE
        rplQ  526611 ..  526656 + -14.9   -5.4505   TCTTTCTTTCCGAGT CTAGCTCTTTCATCCCTAGGC AGAA GTCTAGGGATGAAAAAGTTTG TTTTTTATTGAGACA 100 76
HMPREF9243_0535  528846 ..  528869 + -12.5  -5.08255   TACGATAACTATAGC          CCCTCCGTT AATTAG AACGGAGGG           TTTTATTTTAGAAAT 100 218
HMPREF9243_0537 NONE
HMPREF9243_0538 NONE
HMPREF9243_0539  531404 ..  531432 + -11.1  -2.93101   ATGAATGACAAGAGC        GAAAAGCTGGC AGTGATG GCCGGCTTTTC        CTATTTATTTGTGAT  79 56
        truA  532321 ..  532334 +  -2.5   -3.3334   GATGATAGTACTTAT               TATTT GAAA AAATA                TTGTAAAATAACCTT  46 76
HMPREF9243_0541 NONE
HMPREF9243_0542 NONE
HMPREF9243_0543 NONE
        rplM NONE
        rpsI  534839 ..  534859 +  -9.7  -5.88565   TATATGTGGACAAAA            GCATCTTCC TAT GGGGGATGC            TTTTTTTATTGTAAA 100 49
HMPREF9243_0547  537611 ..  537630 +   -10   -5.1356   GTTATTCTTGAAAAA            GGCATTCC TAGC GGAGTGCC             TTTTTATTGATAAAA 100 53
HMPREF9243_0549 NONE
HMPREF9243_0550  544858 ..  544898 + -11.1   -5.5454   AACTTTTAATAACAT  CCGCTCTCTCCTAGCGAGT AAT ATTAGCTCGGAAAGGGCGG  TTTTTCTTTGTTTCA 100 72
HMPREF9243_0551  545946 ..  545958 +  -4.1  -2.62184   GTGACATTACAGTTA                CTTTG AAA CAAGG                TAATGTAAGCAAGAC  45 250
HMPREF9243_0554 NONE
HMPREF9243_0555  555634 ..  555663 +  -8.6  -5.10877   TGGTGGTACAAGAAA       GCGAGCA-GACCA TTTTC TGGACCTGCTCGC       TTTTTAATTTATTAT 100 103
HMPREF9243_0558 NONE
HMPREF9243_0559  561211 ..  561237 +  -3.6  -3.78693   CAAAAATTGTCCTAA         CCCTTAGCCATT GAA ATTGGCCAAGAG         CTTTTTTATAACTTT  54 57
HMPREF9243_0560  562376 ..  562395 +  -6.4  -5.54885   AAAAAATGACTAAAG            GGAGGGCT GCGC AGCCTTTC             TTTTTTATTAATCTT  93 85
HMPREF9243_0562  564193 ..  564216 + -14.6  -5.48825   GTCACAACACGAGGA          GAGCGCCCCA TCGC TGGGGTGCTC           TTTTTTTACGTCATG 100 290
HMPREF9243_0564  566248 ..  566282 + -13.8  -3.74872   ATCGCTGGAGCTAAA     GGGCGAAAGAATTCTC AAA GAGAATTTTTTTGCTC     TTTAGTAAAGTGGAT 100 250
HMPREF9243_0565 NONE
        phnD  567475 ..  567502 +    -7  -5.14563   AGAATAATTCAGAAT        CACATCATGTCC AAAT GGATTTGGTGTG         TTTTTTAATAGGGGG  90 34
        phnE NONE
        phnE NONE
HMPREF9243_0570  570749 ..  570773 +  -7.2  -5.09426   AAACAAAATGTTTAG          GAGCCTATGA CTAGT TTGTAGGCTC          TTTTTTACACTTGGA  90 114
HMPREF9243_0571 NONE
HMPREF9243_0572  573261 ..  573288 +  -9.2  -5.91981   AATAAGACTAAAAAA        GCAGACGTTC TCAAAACT GGACGTCTGC         TTTTTTTTGCCTTTT 100 45
HMPREF9243_0574  575731 ..  575741 +    -4  -3.65696   CATCTTTATTTAGTA                 CAAA ATA TTTG                 TTGCTTTGTGTAAAT  54 76
HMPREF9243_0575  577154 ..  577175 + -10.9  -5.58074   CGATAAATAAAGTGA           GACTGTGGC TTTT GTCACAGTC            TTTTTTTGATCCTTA 100 48
HMPREF9243_0576  577719 ..  577752 +  -7.6   -5.7946   GGTGATATTGAATGA     TTCTGTGCTAGAAG CTCGTC CTTTTAGCATAGGA      TTTTTTTATTGGGGG 100 41
HMPREF9243_0577 NONE
HMPREF9243_0578 NONE
HMPREF9243_0579  580584 ..  580599 +    -4  -3.53012   CGCTTTTTTTAGTGG              TTGAGA ATCG TCTCGA               TTTCAGCGAGGGAAG  52 102
HMPREF9243_0581  582385 ..  582419 +  -2.2  -5.42514   AATATAGAGAAAAAA    GGCTAGCC-C-TAGCT GTTAA AGCGATGTGGCTAGTC    TTTTTTGCTTTATCA  73 55
HMPREF9243_0585  586871 ..  586883 +  -3.3  -3.82499   ACTAGTCCTTTTGTA                GCCCT ACA AGCGC                TTTGATAAATTTACT  55 36
HMPREF9243_0586  587423 ..  587458 +  -6.3    -5.243   CGTAAGACCTTGAAA    CAACAAATAACTAGA ATCTAA TCTAGGGATTTGTTG     TTTTTTAATACTTTA  83 71
HMPREF9243_0587 NONE
        recX NONE
        mutY  591358 ..  591376 +  -7.5  -4.39568   ATATCTAACAGGCGT             TTTTCCC CATCA GGGAAAA             TTTTAATATCTAAAT  77 504
HMPREF9243_0591  593113 ..  593150 + -13.7  -5.66684   TGGTTTTAACATTAA   CAGTCAGCTCT-AGCTAG CAA TTAGTTGAGAGCTGACTG   TTTTTTTATGGCTTG 100 70
        pulA  595507 ..  595526 +    -2  -3.97444   CAAGGATTCTGTTTC            TGGGCCTC GGTT GAGGTCGG             TTTCCTTGATGATAT  53 277
HMPREF9243_0596  599366 ..  599388 +  -6.3  -3.79747   AAATGAGCTATTCAA           CGCTCATGA TTCTT TCATGAGAG           TTTGATCCTGGCTCA  63 507
        rrsC  600974 ..  600989 +  -4.7  -3.63464   TCTTTGTTTAGTTTT              GAGAG GTCTAA CTCTC               TATTGTTCTTTGAAA  57 74
        rr1C  604034 ..  604050 +  -9.5  -2.71708   CTAATCGGTCGAGGA              CTTATCC AAA GGATAAG              GTTGTATGAGGTTTA  72 22
        rrfC  604226 ..  604236 +  -5.4   -3.8165   TGTGAGACTAGGACG                 TTGC CGT GCAA                 TCTTATTTTATTCCG  60 17
HMPREF9243_0599 NONE
HMPREF9243_0600  604420 ..  604432 +  -3.3  -3.32268   GGGAGACCGTTTCAA                GGGTT CGA ATCCC                TTACTCTCCGTTTTA  48 3
HMPREF9243_0601 NONE
HMPREF9243_0602 NONE
HMPREF9243_0603 NONE
HMPREF9243_0604 NONE
HMPREF9243_0605  604858 ..  604872 +  -4.2  -3.07935   GTTCCTTCGGGTTCA               GAGGTT CGA ATCCTC               TTCCCTCCATAAAAT  50 2
HMPREF9243_0606 NONE
HMPREF9243_0607  605058 ..  605072 +  -4.2  -2.74019   TGGCTCCGACACTCG               GGGG TTCGATT CCCC               TCGTTCGCCCTTATA  47 0
HMPREF9243_0608  605196 ..  605215 + -10.8  -3.88182   TGGTAATTGTTTAGA            CCTCTTCT TTTA AGAAGAGG             TTAGTTTTTAATTAA  89 58
HMPREF9243_0609  605293 ..  605303 +  -2.4  -3.35996   ATCGCCGGTTCAAAT                 CCGG CTA CCGC                 CTTTTATATATAAGC  45 9
HMPREF9243_0610  605411 ..  605451 +  -6.4  -5.95539   CGGCATAGGTAGAAA CGTTGTCATATCAAGCTTT CTAA AAAGTTTGAT-TGGTGACG  TTTTTTTATTTGCCA  93 36
HMPREF9243_0617  611597 ..  611639 +   -18  -5.04597   GTAATTTGCCTGTAG TGACCCCCAAAAGTTGGACT AAG AATTCAACTTTTGGGGGTTA TTTTTATGTCTAAAT 100 88
HMPREF9243_0618 NONE
HMPREF9243_0619  613265 ..  613299 +  -6.6  -3.06399   AGGCTTGAGGTTTTT     CTTATAGGATGTTTTC ATA GAAAAAGTCTTGTAAG     TCTAGTTTGATTAAG  60 219
HMPREF9243_0621  615787 ..  615818 + -16.7  -4.85129   ATTTGTAAAGAAAAA      GGCAGGACTTCCT AAATAG AGGAGGTCCTGCC       TTTTTGCTATCTAAT 100 33
HMPREF9243_0623 NONE
HMPREF9243_0624 NONE
HMPREF9243_0625 NONE
HMPREF9243_0626  620094 ..  620107 +  -2.4  -3.10409   CATTATCGGTACCTT               TACC TCAGCC GGTA                TTAAATAGATTAGTG  42 4
HMPREF9243_0627 NONE
HMPREF9243_0628  622667 ..  622701 +  -9.4  -4.86731   AACTAGTCATATGAA     TAGAAAGCTGGGGC AGACAAG GCTCCAGCTTTTTG     TTTTATTTAGAGAGG 100 35
HMPREF9243_0629 NONE
HMPREF9243_0630 NONE
HMPREF9243_0631  625193 ..  625232 +    -8  -5.42265   TAAATAATATTTTTA  TCCCTCAGACCTACTTTTA TTG TTAAATTGGG-CTGAGGGA  TTTTTTGTACTTTGA  95 48
HMPREF9243_0633  636178 ..  636214 + -13.3  -5.09895   TTAGACAAAAAAGAA   GCAGAACAAG-ACTGA AAATAA TCAGTTCTTGTTCTGC    TTTTTTGCATAGCTA 100 79
HMPREF9243_0635  637788 ..  637817 +  -7.3  -5.68438   TAGATAAACTAAAAA       TGAGCTTT-CCC AAGACCG GGGTAAAGCTCA       TTTTTTATTTGCTAG 100 38
HMPREF9243_0638  642517 ..  642541 +  -7.2  -5.60993   ATTTTGTCTCCCCAT         GAGGTTGGCTA ACAT TAGCC-GCCTC          TTTTTTTGTGGAGAG 100 45
HMPREF9243_0639 NONE
        pdxB  644472 ..  644497 + -14.1  -4.11394   AGTGAATACAAAAAA         GAGTCTGGGAC AAAA GTCTCAGACTC          TTTTCAAAATACGAT 100 66
HMPREF9243_0642 NONE
HMPREF9243_0643  648148 ..  648171 +  -3.1  -2.50291   TTTACTGTAGGTTTA          CCATTCAGT CACTGA ACTGGCTGG           GTTAGTAAAATACTT  43 31
HMPREF9243_0644  648637 ..  648664 + -13.6  -5.79595   GAATAATTAAGCCTC        TAGTCACCTCAA ATCT TTGAGGTGGCTA         TTTTTTATTTTGAAA 100 35
HMPREF9243_0646 NONE
HMPREF9243_0647  653835 ..  653862 +    -7  -4.84527   ATGAGAACTGAAAAA        GGAGATCGAGAC TATT GTTTTGACCTCC         TTTTTAATATATGGA  83 40
HMPREF9243_0648  654999 ..  655033 + -13.6  -4.30844   CAAATAAAATGAAAA     GAGCATGGCCCGAGGA GAT TCCTTGGAGCATGCTC     TTTTACTGATAGACT 100 34
HMPREF9243_0652 NONE
HMPREF9243_0653 NONE
HMPREF9243_0654  660137 ..  660158 + -10.9  -4.87665   CTTGTTAATTAAAAA           GGTTGTGGC AAGG GTCACAACC            TTTTTCTAAGTAAGC 100 78
        trmB  660875 ..  660915 +  -6.2  -5.07486   TGATAAAAAGAAAAA CCAAGCGGGTAGT-CTC TTCACTTT GAGCACTTCCGGCTTGG  TTTTTCTTAAGCATG  83 56
HMPREF9243_0657 NONE
HMPREF9243_0658 NONE
        murC NONE
HMPREF9243_0660  665196 ..  665221 +  -9.8   -4.8622   AAATAAAGTCATCTA         GTCTCCTTCA ACTAGC TGAGGGAGAC          TTTTTCATTGGAGGA 100 35
HMPREF9243_0661  666422 ..  666455 +  -9.7  -4.11216   AACCACTGGAGGAAA     CTGGTATAAGCTCAGC TGT GCTGAGTAT-TACCAG     TTTTGGAAGTGGACG  86 199
        folC  667962 ..  667999 + -10.7  -5.35224   CGACCAATAAAAAAG   CCGAATGGATCAGTG ATCCTTTA CACTGATTCATCCGG    TTTTATTTTTATAAA 100 31
        leuS NONE
HMPREF9243_0666  672411 ..  672449 +  -2.5  -5.04356   TAGGAAAAACCAAAA  GCGATTAACTC--GGAAGG AAG CCGTGCAAGGGTTAATCGC  TTTTTACTTGTTTCG  68 38
HMPREF9243_0667 NONE
HMPREF9243_0668  674155 ..  674184 +  -7.3  -5.02323   ATTAATAGTTGTCAG       GCGACTAATCAGTT AAT AACC-ATTAGTCGC       TTTTCTTTGTAATAA  85 36
HMPREF9243_0669 NONE
HMPREF9243_0670 NONE
HMPREF9243_0671  676615 ..  676629 +  -2.9  -3.96298   AGGATTCCTTAACTC               CTTAA AGTCC TTAAG               TTTACTTAATGAATC  52 47
HMPREF9243_0672  678600 ..  678635 + -19.2  -2.71263   GATAGTTCGTGTTTT    AAAAAGAGCCTGGGAC TTTT GTCCCAGGCTCTTTTG     TCATTAAGGAAAATT 100 184
HMPREF9243_0675 NONE
HMPREF9243_0676 NONE
HMPREF9243_0677 NONE
HMPREF9243_0678  683987 ..  684007 +  -7.6  -5.10497   CATTTTTAATAAGGA            GACTGGAT ATCAA GTCCAGTC            TTTTTTACCTCGGTT  93 486
        pheS NONE
        pheT  687950 ..  687971 + -11.7  -5.41143   AAGACTATCTTTAAA           GAACCTTGA TAAG TCAAGGTTC            TTTTTTTGGCGGGTG 100 105
        agcS  689548 ..  689604 + -14.6  -5.06089   ATATTGATGAAATTG TGAGCGCTTCTCCAGC-TGCCGATT CTATTCGT AATAGGCAAGCTGGAGGGGCGCTCC TTTTCTTTGTACTTT 100 57
         pta  690723 ..  690744 + -12.3  -4.89852   TCACGATAAATATGA           GCCCTTGCC CCAA GGTAAGGGC            TTTTTATCGCTATAG 100 54
HMPREF9243_0684  691439 ..  691466 +  -7.8  -5.37593   AAGATTGATGAAAAA        TCCAAGCGCTGCT TTT ATCAGC-CTTGGA        TTTTTTACTTTACAG  95 40
HMPREF9243_0687  693955 ..  693965 +  -6.8  -3.30441   TCTATCTGTTTTTAT                 CGAC ATT GTCG                 TATTACTTGTGCATT  62 128
        ppk1  696670 ..  696683 +  -3.1  -4.16943   AAGCTTTGGTGGATG               GC-GTC AAA GACCGC               TTTTCCAATCTCGGG  60 499
HMPREF9243_0690 NONE
HMPREF9243_0691  698238 ..  698269 +    -6  -5.06414   TCCGCTTCAGAAAAT      GGCG-ACAAATTCTC TTT GAGAATTTTTACGTC      TTTTTCTTCCAGCGG  80 188
        murB  699688 ..  699711 +  -5.3  -5.59357   ATATATTAAGGATGA          GCTCTAGTGG ATATG CC-CTAGGGC          TTTTTTTCATATAAT  88 77
HMPREF9243_0694  701648 ..  701672 +    -5  -5.28481   TATCAAATACTAAAA          GGACTGTGAA AACGA TGTACAGTCC          TTTTTTAGTTGAGTG  84 93
HMPREF9243_0696  703852 ..  703885 +  -9.6  -5.55664   CGACTTAATAAGAAT     TCCCGCATGGACCA CATGAA TAGTCTGTGCGGGA      TTTTTTTGATCCTGC 100 254
HMPREF9243_0697 NONE
HMPREF9243_0698 NONE
HMPREF9243_0699  706706 ..  706734 +    -9  -5.58074   AAATATCTAAAAAAA        GCAGTTATGC TCACAAAAC GCATAACTGC        TTTTTTTAATAATTA 100 62
HMPREF9243_0701  710211 ..  710243 +   -10  -4.39828   CAGTTTCTATTTAGA     TAAAG-GGCTGGGAC TTTT GTCACAGCCTCTTTA      TTTTATAAGGCTATT  91 75
HMPREF9243_0702  711787 ..  711802 +  -2.5   -5.4833   CCCTAGAAGCAGTCT              CAGCC CAGGGC GGTTG               TTTTTTATTGGATAG  77 123
HMPREF9243_0703 NONE
HMPREF9243_0704  714044 ..  714069 + -11.9  -5.00339   TTCGTATTTTGAAAA         GAGTCTGAGAC TTTT GTCCCAGACTC          TTTTTCCTTGTTGCT 100 350
HMPREF9243_0706  716996 ..  717018 +  -3.5  -5.66338   TGTCCCTTTTTGGGC          CTCTCC-AAT GTAT ATTAGGAGGG           TTTTTTATTATGTTT  84 246
HMPREF9243_0707  717603 ..  717622 + -10.7  -5.12971   CTTTTAATAGTTAAA            GGCGGGT CATTGA ACCCGCC             TTTTTATTAGGTATT 100 58
HMPREF9243_0708  718749 ..  718798 +  -7.5  -3.44334   TTTGTTAATGAAATG GAACGTTCCAAATATT-ATTATAA TTA TTATTATTAATTTTGGGAACGTTC TTAATATTAATTTAA  67 58
HMPREF9243_0709 NONE
HMPREF9243_0710  720968 ..  720982 +    -5  -4.20817   ATGGGCCCTTTAGCT               GGAATT GGA GATTCC               TTATTTTGGGGTGTA  65 376
HMPREF9243_0715 NONE
HMPREF9243_0716  726797 ..  726818 +  -4.4   -3.8579   ACAGTCAATTTGACC           GTCAGGCT TAAGCT GGTCTGAC            TTTGGCTTATTGAAT  59 15
HMPREF9243_0717 NONE
        deoC  728305 ..  728350 + -17.1  -5.38054   GAATTAACAAACTAA TAAAGCCCTTACGGCTAGGAA AATC TTCCTAACGGTAAGGGCTTTG TTTTTATTTATAAGA 100 34
HMPREF9243_0721 NONE
HMPREF9243_0722  731891 ..  731905 +  -3.6  -3.57144   TGAAAAATAAAGTTT               TCTTAT ATA ATAAGG               TTTACCAGTAGCAAA  52 64
HMPREF9243_0723  732854 ..  732890 + -21.9  -4.75776   GGAAAAAATATTTAA    TAAGCAGCGATTCATCA TCG TGATGAGTCGCTGCTTA    TTTTTCGCTTGCCTT 100 40
HMPREF9243_0726  736152 ..  736175 +  -8.8  -5.28778   GTCTAACCCTTATTT          AGTCCTTGCC ATTT GGCAAGGGCC           TTTTTTGTGACTAAT 100 59
HMPREF9243_0727 NONE
HMPREF9243_0728  737861 ..  737873 +  -3.4  -3.67296   AAGAAATTGCCCAAC                GCTT TATCC AAGC                TTTGGATGAATAATA  52 0
HMPREF9243_0729 NONE
        nagA  741194 ..  741220 +  -8.1  -5.38249   TACACTCTTTTTCAA         GCTAGGCTTAT CGTTT ATAGGTCTAGC         TTTTTTGTGGTTAAT 100 121
HMPREF9243_0731 NONE
        nrdI  742998 ..  743015 +  -2.6  -2.76815   CAATAAGCAAGTGCA             AGCCAC GTCTTA GTGGCG              ATTATTGAAAGGAGT  42 35
HMPREF9243_0733  745281 ..  745308 +   -10  -4.14598   AAAGCATGCAAAAAA        GCAGCTCT-TCTA TTT TGGAAAGAGCTGC        TTTAATTTACTTAAA  86 69
HMPREF9243_0736  747732 ..  747757 + -11.9  -5.38951   GATTTATCAAGCAAA         GGGACTGTGAA AAAA TCCACAGTCCC          TTTTTTGTCTAAGTT 100 41
        spxB  750381 ..  750439 + -11.2   -4.7871   CATATACTTAATAAA GCAGCCAGTGATTGAAAGC-TCCT-GTC TCTGT GACTAGGATGGCTTCAGTCCCTGGCTGC TTTTTACTAGTACTT 100 110
       gshAB  755290 ..  755332 +   -18  -5.04597   TCAGTTTAAATGTAG TGACCCCCAAAAGTTGGACT AAG AATTCAACTTTTGGGGGTTA TTTTTATGTCTAAAT 100 57
HMPREF9243_0742 NONE
HMPREF9243_0743  757181 ..  757195 +  -6.4  -2.57501   GTTTTCCTAAAGGAT               TCCTCT AGT GGAGGA               GTGTATTTAATGAAA  57 442
HMPREF9243_0744 NONE
HMPREF9243_0745 NONE
HMPREF9243_0746 NONE
HMPREF9243_0747  761485 ..  761513 +  -4.6  -5.65927   ATTATATTGAAAAAA        GCCAAGTGAG CGACTTGAA CTGACTTGGC        TTTTTTCTTTAGCTA  86 17
HMPREF9243_0748 NONE
HMPREF9243_0749  762596 ..  762608 +  -7.7  -3.15726   GTTTAGTCCAACTGA                TTGGG CAT CCCAA                TGTTCGCTGCTTTTT  66 127
HMPREF9243_0753 NONE
        pdxT  766269 ..  766290 +  -8.1  -5.53991   CATGAAGTAAAAAAA           TCAGTGCTCA CAG TG-GCACTGA           TTTTTTTGATGACTA 100 44
HMPREF9243_0759 NONE
HMPREF9243_0760  771632 ..  771663 +   -11  -5.24531   GTAACACGATGCGTC      GTCCTTTACTATTC AAGT GAATAGTAGGGGGC       TTTTTTATGGAAAAT 100 311
HMPREF9243_0762  772513 ..  772538 +  -4.7  -3.06831   TAACGTTGCCGCTTG         GGAACTATTTG GCCG CAACTAGGTCC          TTGGCTAGGAATTAG  52 4
HMPREF9243_0763  773862 ..  773882 + -11.9  -5.52384   AAGCGATCTACTAAG            GCCTTACCT TTA GGGTAAGGC            TTTTTTTCGTGAAAG 100 78
HMPREF9243_0764  784199 ..  784224 + -11.9  -5.51612   CGTTTAAGATAATAG         GGCTTGGGAGA TTTT TCTCCCAACCC          TTTTATTTTTTATAT 100 194
        asp1 NONE
        asp2 NONE
        asp3 NONE
       secA2 NONE
        gtfA NONE
        gtfB NONE
HMPREF9243_0772 NONE
HMPREF9243_0773 NONE
HMPREF9243_0774  799116 ..  799159 +  -4.2  -3.15544   AAAAATTAATATTAC TTAGGTTAATTAATAATAGT TTTT ATTACTATTAAATAACTTAA TTAATAAAGATGAGA  51 205
HMPREF9243_0775  800102 ..  800159 + -10.4  -5.73978   GAAGTCTATAAAAAA GCATGGTTTAGC-TT-AAACTCAATTTCT AAC AGGAATTGGGTTTAAAAGC-AGACCATGC TTTTTTATTTATGAT 100 51
HMPREF9243_0777  802773 ..  802787 +  -3.5  -3.50853   AAAAAACAGTTTATC               CGCCA TGAGT TGGTG               TTCTAGTTAGGGGAG  50 271
        guaA  810946 ..  810972 +  -8.7  -4.21922   TATTGATATTAAAAA         GCCGCTACTGG TATTT CTAGTAGAGGC         TTTAATTTTAAATGA  83 46
HMPREF9243_0794 NONE
HMPREF9243_0795 NONE
HMPREF9243_0796 NONE
HMPREF9243_0797  821415 ..  821438 +  -7.4    -5.626   TTTTAGATTCTAGAA          GAGGTGGGAC CAAG GTCTTGCCTC           TTTTTTTGTGGACTG 100 52
HMPREF9243_0798  822242 ..  822255 +  -3.8  -3.89893   TAAATCTTATTATTG               CCAG CAAGGC CTGG                TTATTGTCATATTGT  56 38
HMPREF9243_0799  824458 ..  824469 +    -3  -4.19735   ACAAATCGACCTACT                CTTT AAAG AAAG                 TTTAATTTTACCGAA  57 52
HMPREF9243_0800  825472 ..  825492 +  -6.1  -5.58179   TAAATTTTTTTGAAA            GGATGGATG AAA CTTCCATTC            TTTTTTATTCTAATC  91 38
HMPREF9243_0801 NONE
        nagE  828093 ..  828116 +  -4.5  -5.19212   CATAAAATGATTAAG          GGGCTGGGA TAACTT TCTCGGTCC           TTTTTTAATACTAAT  76 36
HMPREF9243_0803  828962 ..  828980 +  -3.8  -4.23298   ATCCTTGGGAGTTAG             CTTCTTTG TAG CTAAGGAG             TATTTTTTACCTTTA  61 160
HMPREF9243_0806 NONE
        trxA  832510 ..  832531 +  -8.7  -5.69262   GCAAGAGTTAAAGGA           GTGCTGCAT TTAA GTGCGGCAC            TTTTTATTTTTCTGA 100 41
HMPREF9243_0808  833190 ..  833231 +   -14  -4.24149   AAGTAAAAAAGAAAA GGTCAACTCGGATTCTCTC TAATC GAGA-AGTCTGAGTTGACC TTATTATTTTGCTCA 100 46
        murI  836242 ..  836260 +  -6.6  -2.75066   TAATTGCCACCAAAA             ATCCTGGC AAG GCCAGGGA             ATTTCAACAATTATT  57 63
HMPREF9243_0813  837492 ..  837517 +  -8.9  -4.56597   TTCTTCTTATCGAAA         GAGCCTTGGTC AAAA GTCCCAGGCTC          TTTTTAAAACACGAA  90 199
HMPREF9243_0815 NONE
HMPREF9243_0816  839923 ..  839960 + -19.5  -4.45771   AAAACATACTAAGAT   TAGCTCGAAGGTAAATC GACG GATTTATCTTCGAGCTA    TTTCTATTTTCAGAT 100 53
HMPREF9243_0828  851755 ..  851773 +  -5.2  -3.19175   TCTTCTTGGAATAAG             GCGCTCCA AGC TGAAGTGC             TTGCCTATATTGCCG  53 54
       comGB NONE
HMPREF9243_0830 NONE
HMPREF9243_0831 NONE
HMPREF9243_0832 NONE
HMPREF9243_0833  855189 ..  855210 +    -8  -4.64766   ATTTGTTTTAAAGAA           GGTTGTGG TTCAAT CCACAGCC            TTTTTGCACTATAAA  84 97
HMPREF9243_0834 NONE
         efp  857124 ..  857137 +  -2.5  -5.49234   TATATCGTTGATGAT               TATTT GACG AAATA                TTTTTTGTTAAATAT  77 69
HMPREF9243_0836 NONE
        nusB  858355 ..  858372 +  -2.6  -4.34771   TTGACTCCCGTGGTT             CAGGGC TTTTTT GACCTG              TTTTCCTGACTTTTG  57 156
        folD NONE
        xseA NONE
        xseB NONE
HMPREF9243_0841 NONE
HMPREF9243_0842 NONE
        recN NONE
        miaA  865312 ..  865326 +  -2.9  -2.90455   GAAAAAGAAAGGAGC               TTTCT ATGCC AGAAA               ATGTTTTAATTATCG  42 40
        hflX  866559 ..  866581 +  -7.7  -4.77896   GAATAAAAGAAAAAA           GCTGGCAGA ATTGA TCTACCAGC           TTTTTAACTTGCTTG  88 35
HMPREF9243_0847 NONE
HMPREF9243_0850  869429 ..  869449 +    -4  -3.43042   CTAGGATGAATAGAA            GAGAATCT CTGCT AGCTTCTC            ATTTTTAATAGAAAA  50 37
HMPREF9243_0851  870450 ..  870461 +    -3  -2.70708   TTCTCTCTGTTCTTT                TCTT CACA AAGA                 TAGTATGATTAACTT  41 65
HMPREF9243_0852  872386 ..  872414 +  -6.1  -5.07523   TATATATAGACAAGT        TAAAGGCCTAG TTTAACT CTGGGTCTTTA        TTTTGTTTATATGTG  83 58
HMPREF9243_0853  873159 ..  873198 +  -3.2  -3.92996   AAGAGCCGGGTGTAA CTTTTCATT-TGAT-AGG CCCAGC CCTGATCAGAATGAAAGG  TTCTTCTGTATGGAC  55 291
HMPREF9243_0856  875298 ..  875318 +  -6.9   -3.6682   TAGTTACCAGCCAAA            TAGCGCT CTAATCC AGCGCTA            TTTCCATGCATAAAA  69 47
HMPREF9243_0857 NONE
HMPREF9243_0858  876861 ..  876871 +  -3.2  -2.99596   GAATAAATCGAGAAG                 GAGT AAA GCTC                 TGTGATTGATTTACA  45 41
HMPREF9243_0859 NONE
HMPREF9243_0860 NONE
HMPREF9243_0861 NONE
HMPREF9243_0862 NONE
HMPREF9243_0863  882234 ..  882249 +  -3.2   -3.7398   CTAGCCTATTAAAAG              GAGGCC ATGA GGTTTC               TATTTTGGCTTGGGA  52 162
HMPREF9243_0865  884887 ..  884897 +  -5.4  -2.82491   ATGGAATTATTTGTG                 TGTC TGA GACA                 TGTGCTGAGTATATA  52 398
HMPREF9243_0867  885827 ..  885837 +    -4  -2.57211   GACCGAAATCAACGC                 TATC ATT GATA                 ATTATAAAAAACGCT  45 338
HMPREF9243_0871 NONE
HMPREF9243_0872 NONE
HMPREF9243_0873  890123 ..  890140 +  -2.7  -3.18849   CTTGTAAAGACTTTT             TTGACCT AGTT AGTTCAA              TATTAGTCATATAAG  45 57
HMPREF9243_0874  891502 ..  891512 +    -4  -3.23585   GCAAACGGACAGTAT                 TTTC GAT GAAA                 TTACCTGTTATGTAT  48 139
HMPREF9243_0877  893894 ..  893905 +  -4.4  -3.81689   CTTATTAAACTAAAT                TTGG AGTA CCAA                 TTTGATAATAGTATT  57 468
HMPREF9243_0879  896976 ..  897027 + -17.8  -3.53094   AACTGTACTAAATAC TACATATGAAAAACCGTAGGAGCAC TGT GT-CTCTTACGGTTTTTCATATATA TCTTGTTAATTTAAG 100 333
HMPREF9243_0883  901908 ..  901919 +    -3  -3.59979   TTAGGGATGGATCAT                GATA TTTT TATC                 TTTGAACTCAGGAAG  48 137
HMPREF9243_0886 NONE
HMPREF9243_0887  905318 ..  905328 +  -5.4  -2.55874   AGCGAAGAGGAGGCT                 GTTC GAT GAAC                 CTGTTACTGTATTTC  51 17
HMPREF9243_0888  906604 ..  906633 + -10.8  -5.45802   GGAATTTAATCCAAG       CCACCTTTCTCT AGTTAA GGAGAAGGGTGG        TTTTTCTTTTCAAGG 100 32
HMPREF9243_0889  907275 ..  907290 +  -2.6  -3.56161   CAGTCTTAAATTAGG              TGAA-GG GAC CCATTCA              TTGTGTCATCAATTG  48 43
HMPREF9243_0890  908298 ..  908329 +  -3.8  -4.26903   GAGAGTGTGACAAAA      GTCAAAAGAATTCAC ACA GTGAATTCGTC-GAC      TTTTCGTAAAGTGGA  61 44
HMPREF9243_0894  911991 ..  912028 +  -6.3  -5.28778   GTCTTTTTTTAAGGC   GGTCCCAAGGATGTTGA TTTC TAGGTATTCTTGGGGCC    TTTTTTATACCTACT  89 40
        glcR NONE
HMPREF9243_0898  915098 ..  915112 +  -2.1  -2.66291   ATGGGGTGAGTCAGG              CCC-TC AGTC GATGGG               TACTATAAATATATA  40 3
HMPREF9243_0899  915774 ..  915790 +  -5.2   -3.2244   AGCGATTGCGCTATA              GTTATG AAAAG CATAAC              TTGCGTCTTATCATA  53 124
HMPREF9243_0900 NONE
HMPREF9243_0901  917528 ..  917546 +  -8.1   -5.1861   TTATCACGTAATTAA             CCAGGGC CAGAT GCTCTGG             TTTTTTGCTCCTCAA 100 57
HMPREF9243_0902 NONE
HMPREF9243_0903 NONE
HMPREF9243_0904 NONE
HMPREF9243_0905 NONE
HMPREF9243_0906 NONE
HMPREF9243_0907  921809 ..  921826 +  -6.3  -3.54297   CCACCGAGTGCTAGT             GGCTGACA TTT TGTC-GCC             TTGTCGTTGCTCGAT  61 58
HMPREF9243_0909  924907 ..  924935 +  -8.2   -5.1675   CATACTTGTGGCAAA        GCCTAGAGGG CGATTTATT CCCTTTAGGC        TTTTTTGCTGACTAA 100 326
HMPREF9243_0910  926859 ..  926884 +  -6.9   -3.3782   ATAAATAAGTAAAAT         GAGGCTGTG ATGCTTGC CACAGTCTC          TTCATTAAATAAATA  65 33
HMPREF9243_0911  928570 ..  928596 + -11.7  -4.72272   CGATATTACCGATAA         TGGGATCAGAG CGCAT CTTTGATCCCA         TTTTTACTAGAAAGA 100 52
        pepT NONE
         xfp  932436 ..  932455 +  -7.1  -5.80951   ACTAATAGTAGAAAA            CGGCAGG CGAAGT CCTGTCG             TTTTTTCTTTTGACT 100 45
        argS  934318 ..  934361 + -14.2   -5.7946   TTTAAGCTAATTAAT TCCTCTTAAAG-CACTTTCAA GTT TAGAAAGTGGCTTTAAGGGGA TTTTTTTCTTGGCCA 100 62
HMPREF9243_0915  941499 ..  941524 + -12.7   -5.4505   CCTATAAGCTAAAAA         GCTCTCATACA TGAA TGTATGGGAGC          TTTTTTATTGGAAAA 100 54
HMPREF9243_0916 NONE
HMPREF9243_0917  950361 ..  950381 + -14.7   -5.5112   TTAGCTTCTCTTCCA            GCACCTCGC TTA GCGGGGTGC            TTTTTTATTAATAAA 100 51
HMPREF9243_0919 NONE
HMPREF9243_0920 NONE
         gor  953892 ..  953910 + -10.3  -5.48054   ACTATTTTTTATGAG             GCTGGGA GAAAA TCCCAGC             TTTTTTGCTTTTGAT 100 49
HMPREF9243_0922  954566 ..  954597 + -10.3  -4.30014   ATGACCATTAAAAAA      GCGGACTTTAC TTTTTTAACC GTAAAGTCCGC       TTTTAAGTTCATCAC  90 30
HMPREF9243_0924  956220 ..  956242 +  -2.8  -2.52464   ACAGTTATTTTAAAA           CTTTATTAAT TAT ATTGATAGGG           TGAGTTAGAAAGGAG  41 48
HMPREF9243_0925  957519 ..  957530 +    -3  -2.79023   TATAAGTAGTTAAAC                TACT CCCA AGTA                 TCATTGATAAGGTTA  41 417
        purE NONE
        purK NONE
        purC NONE
        purS NONE
        purQ NONE
        purL NONE
        purF NONE
        purM NONE
        purN NONE
        purH NONE
        purD NONE
        purB NONE
HMPREF9243_0946  977900 ..  977920 + -11.1  -4.98255   AATAAGTATAAAAAA            GGCAGGGCT CAA AACCCTGCC            TTTTTATACTTAGAA 100 152
HMPREF9243_0950  984843 ..  984862 +  -4.4  -4.42062   TTAAAGCCTCAATAA            CATTTTGA TAGG TTAAAATG             TTTCTTTAAAGAATG  66 26
HMPREF9243_0951  985384 ..  985407 + -14.6  -4.26681   TCAATCGCTAAAAAA          GAGCGTTGGG AAAA CCCAGCGCTC           TTTTAACTGCTTTGT 100 30
        ackA  988053 ..  988074 +  -8.7  -5.28561   ACAAAAGGACTTCAA           GCAAGTGGC TCAG GCTGCTTGC            TTTTTATTGTCTCTT 100 41
        glpK NONE
HMPREF9243_0955 NONE
HMPREF9243_0956  992397 ..  992420 +  -9.6  -4.46615   ATAAGCAGTAAAAAA          GGCCTCAC TTCAAGGT GTGAGGCC           TTTTAATTACTGCTG  91 74
HMPREF9243_0957  993042 ..  993052 +  -2.6   -4.9725   ACCTAGGTTAAAAAA                 TAAT TCG ATTA                 TTTTTATGTAAGCCT  68 49
HMPREF9243_0961  995860 ..  995880 +  -5.5  -2.62515   AAATTCTTAGACATT            TTGTTAAGC ATT GCTTAGTAA            TAGTGTAAACAAATT  51 8
HMPREF9243_0962  996368 ..  996380 +  -3.3  -2.92653   TTACTACCTGGATAA                GGCGT TTG AGGCC                TATCTAAGATTATCA  44 137
        trmU NONE
HMPREF9243_0964 1000521 .. 1000534 +  -3.1  -2.62184   GATATATTTAGTTAG               GCTAG AAAT TTAGC                TCATATAGAAAGGAC  43 225
HMPREF9243_0965 1001635 .. 1001662 +  -4.8  -6.17669   TGGTACCGTGCTACG        GCGCCCTCATCT AATA ACATCAGGGTGC         TTTTTTTATTTTATT 100 284
        alaS NONE
HMPREF9243_0968 NONE
HMPREF9243_0969 1005074 .. 1005085 +    -3  -2.75957   TCTCATTTTACAGAA                CTAT TTAG ATAG                 TCATTCACATTAGTA  42 1
HMPREF9243_0970 1005407 .. 1005433 +  -8.9  -4.92757   AATAAGCCAAGTAAA         GAGAATATGAT ATGAG GTCATATTCTC         TTTTATTATTAATGG 100 36
HMPREF9243_0971 1006801 .. 1006813 +  -3.5  -4.78933   TTGCTAAAAAGTTAG                TAATA TGG TATTA                TTTTGTATATTTTAA  67 56
        greA 1007348 .. 1007372 + -12.2  -4.61873   TAAAGTTAATCGAAG          GAGGCTGGAC GAGAG GTTCAGCCTC          TTTTAATTTGTGCGC 100 41
HMPREF9243_0975 1010634 .. 1010673 + -13.8  -4.30576   GATATTAACAACTAA  CAGATCACTACTCCTTTA TTAT TAGAGGAATGGTGATCTG   TTTTAATAGTAAGCA 100 76
HMPREF9243_0976 1011226 .. 1011246 + -11.3  -6.28401   ATAAAAATTATTTTT            GAGAAATCA AAT TGATTTCTC            TTTTTTTATTTTTTA 100 57
HMPREF9243_0977 NONE
HMPREF9243_0978 NONE
HMPREF9243_0979 1013712 .. 1013739 + -12.2  -5.40474   ATAATTAAATAAGAT        GCAGTGAAGAAA AATA TTTTTTCACTGC         TTTTTTTACCCCAAT 100 37
        fabD NONE
        fabG NONE
        fabF NONE
        accB 1017285 .. 1017295 +  -3.2    -4.258   TGGTAAAGGATTTAA                 GGAG AGA TTCC                 TTTCTTCCTAGCTGA  59 69
        fabZ NONE
        accC NONE
        accD NONE
        accA 1020934 .. 1020951 +  -7.7  -5.50313   TTAAGTAAGAAAAAA             CAGGCGA AAAT TCGTCTG              TTTTTTACTTTTATA 100 51
HMPREF9243_0988 NONE
        rnhA 1022432 .. 1022480 + -24.2  -3.21747   GTGCTAAATTCTTAA CAAATCAAAAGGCGGCCAGGAA TAGAT TTCCCGGTCGCCTTTTGATTTG TTCCTAGTCGCGTAA 100 83
HMPREF9243_0991 NONE
HMPREF9243_0992 NONE
HMPREF9243_0993 1027934 .. 1027953 +    -7  -3.16881   CAGGGGCGTAAAGCA            GCCCAGGC CATG GCTAGGGC             TTAGTCCAGTCAATA  63 2
HMPREF9243_0994 1029439 .. 1029458 +  -2.2   -3.8679   AAACGAGTACAATAT            TTTAAAGT TTTC ACTTAAAA             TTTCAATCTTTTATC  51 56
HMPREF9243_0995 NONE
HMPREF9243_0996 1031993 .. 1032005 +  -4.1  -2.79188   TCAATTGAAAGTTAT                TGGCA AAT TGCTA                TAGTTAAGTTAAATA  46 143
HMPREF9243_0997 1032664 .. 1032703 +  -3.2  -3.92996   AAGAGCCGGGTGTAA CTTTTCATT-TGAT-AGG CCCAGC CCTGATCAGAATGAAAGG  TTCTTCTGTATGGAC  55 291
HMPREF9243_1000 1034682 .. 1034694 +  -3.3  -4.83615   CTGGTGACTAACACC                CGCTG CTT CAGCA                TTTTTCTGAGCGATC  69 478
HMPREF9243_1004 NONE
        prmA 1038119 .. 1038133 +  -2.9  -3.61232   ACGCGTTATAATAAA               TCTAA TATAC TTAGA               TGTTTGTCTAAAAGA  48 67
HMPREF9243_1006 1040414 .. 1040432 +  -5.4   -3.0517   ATGATGTTGAACGGG             TTTAGAGA ATG TCTTTAAA             ATTTCTGTGATCGGT  53 21
         dtd 1040979 .. 1041016 + -19.5  -4.45771   GAAACATACTAAGAT   TAGCTCGAAGGTAAATC GACG GATTTATCTTCGAGCTA    TTTCTATTTTCAGAT 100 66
HMPREF9243_1011 1045883 .. 1045903 +  -2.6  -2.89055   ACTATCCAATTGAAT            CTGTCAAA GATCG TTTTACAG            TCTATGAAAAATTTG  42 55
HMPREF9243_1013 NONE
HMPREF9243_1014 NONE
HMPREF9243_1015 NONE
HMPREF9243_1016 1049096 .. 1049125 + -14.5  -5.45652   TACCACGATTGTCAT       CGTCCTTATTTCT GAAC AGAAATAGGGACG        TTTTTTATTACCACT 100 270
        hisS NONE
        aspS 1052657 .. 1052668 +  -5.8  -3.55622   TTACGAGAGTGTTGA                GCTC TACC GAGC                 TTTAAAGGACTTGAA  61 453
HMPREF9243_1022 1054011 .. 1054052 +  -9.6  -5.51402   CTCCTTATGGGATTA TACAAAAGAGGTTGCGAT GTATCG GTCGCAACCTCTTTTCAA  TTTTTTTAAGTATAT 100 92
HMPREF9243_1024 1055476 .. 1055533 + -14.4  -5.32565   AAAGCATAAGAAAAA CTCAGTCTCTTATCAGACTCTCTGCC AGTCAA GGTAGAAAAATTGATAAGAGACTGAG TTTTTTGGTTAATTC 100 42
HMPREF9243_1026 NONE
HMPREF9243_1027 1059805 .. 1059830 +  -4.8  -3.45033   TTTCAAAGCTTGGCG         TGGCAGTAAT GAAGTA ATTACTACCA          TTATGCTGAATTATA  55 424
HMPREF9243_1030 NONE
HMPREF9243_1031 NONE
        rpsU NONE
HMPREF9243_1033 1063197 .. 1063221 + -12.9  -5.00895   TCATAGAAGTATAGG          GGAGTTGGAGC GTT GATCCAACTCC          TTTTTATATGGTCAA 100 35
HMPREF9243_1034 NONE
        ybeY NONE
HMPREF9243_1036 NONE
         era NONE
        recO 1067136 .. 1067165 + -13.8  -5.33405   CCGCGAAACCATCGT       CCCTATGTATAC CTTTTT GTATACATAGGG        TTTTTCTTTGCTAGC 100 219
        glyQ NONE
        glyS NONE
        cgtA NONE
         rnz 1072569 .. 1072586 +  -5.5   -2.5001   AGTAATAAGGGTAAG             CAAGGGC AGTG GGCCTTG              GTTACTGGAGCTTCT  51 36
HMPREF9243_1047 NONE
         apt 1076269 .. 1076305 + -22.5  -4.98531   ATAATCCAAATAAAA    CCGCTCTCTAAGTCAGT TAC ACGGACTTAGAGAGCGG    TTTTTGCTTTAAAAA 100 65
HMPREF9243_1051 1079310 .. 1079331 + -10.9  -5.23396   TAAGAACGTTCTAAA           GGGCTGTGA CCTA TCACAGTCC            TTTTTATTGGTTATT 100 42
HMPREF9243_1052 NONE
HMPREF9243_1053 1081699 .. 1081719 +  -6.9  -4.77036   TATATTGTTGAAAAA            GAGCGAT GATTAAA ATCGCTC            TTTTTCGTAATCAAA  83 56
HMPREF9243_1054 NONE
HMPREF9243_1055 1083167 .. 1083183 +  -8.1  -3.59979   AGTTTATCAAAGTAA              GGAATAA TAG TTATTCC              TTTAAAATCAGCCAA  69 118
        pnuC NONE
HMPREF9243_1061 1087105 .. 1087126 +  -8.8  -4.48987   ACTAAGGAAAAGTAA           TAGGAGTC TAGTAT GACTCCTA            TTTTAATTATAAAAA  90 90
HMPREF9243_1062 NONE
HMPREF9243_1063 1090175 .. 1090209 +  -6.6  -5.40474   TAGTTAAAGGCAAAA    GAGAGTCAAATCTCC ATAAAA GGA-ACTTGACTCTC     TTTTTTTGACCAGAT  91 46
HMPREF9243_1064 1092511 .. 1092546 +  -6.2  -5.01497   ATTACTTAACTAAAG    GTTCTAGCAGTGGA ACAAAGCG TCTACTGCTAGGCC     TTTTTATATACTAAT  80 54
         pip 1093648 .. 1093694 + -12.6  -4.04326   CGAATAAAAGAAAAA GCACTCCTCAAG-ATGACTTA GAAGGA TAAGTGATCCTTGAGGGGTGC TTTGCTATTTAATTA  95 34
HMPREF9243_1068 1095575 .. 1095597 +  -7.8   -4.9645   GCCCACCAAAAAAGA           GTAAAGGC CTATTTA GCCTTTAC           TTTTATTCTTCTCAT  89 22
HMPREF9243_1071 NONE
HMPREF9243_1072 NONE
HMPREF9243_1073 NONE
        sodC 1101398 .. 1101422 + -15.1  -5.93252   TGTTATAAACACTAA          GAGCTCATGGT TAG ACCATGGGCTC          TTTTTTATTTTTAGC 100 54
HMPREF9243_1075 NONE
HMPREF9243_1076 NONE
HMPREF9243_1077 1104649 .. 1104686 +  -8.6    -5.626   GTGGTACCACGGTTA   TCCCGTCCCTAGGAA AGGTTATTG TTCC-AGGGATGGGA   TTTTTTTATGACATC 100 482
        proV NONE
HMPREF9243_1081 NONE
HMPREF9243_1082 NONE
HMPREF9243_1083 NONE
HMPREF9243_1084 1110341 .. 1110367 + -10.3  -3.98913   ATAGAGCAGAAAAAA         GGACTTCATTT CAATC AAGTGAAGTCC         TTCTTTCGCTCTAAA  88 49
HMPREF9243_1086 1112162 .. 1112186 +  -9.4  -5.40004   TTAACAGGGACTCTA          GCACAGTAGA TACAT TCTATTGTGC          TTTTTTACTTTAATA 100 75
HMPREF9243_1087 1114010 .. 1114020 +    -4  -3.42374   AAAATTTTGTATACT                 CAAT TAC ATTG                 CTTTTATTGATAAAA  50 64
HMPREF9243_1088 1114800 .. 1114840 + -11.3  -2.76651   CAAGTACAATAAATA  GCGTTTATTAGCTTGCTTT TGC AATTCGGGCTAATAAACGC  TACTTCGAATATTTT  79 307
HMPREF9243_1094 1120559 .. 1120590 +  -5.8  -3.36694   CTCTCATTAAAAACA      GCACAGCTAGTTGT TCAT GCAACTGACCGTGC       TCTTTAAAAATGGAT  59 41
HMPREF9243_1122 1153715 .. 1153754 +  -3.2  -3.92996   AAGAGCCGGGTGTAA CTTTTCATT-TGAT-AGG CCCAGC CCTGATCAGAATGAAAGG  TTCTTCTGTATGGAC  55 291
HMPREF9243_1170 1204990 .. 1205001 +  -4.4   -4.0896   GTTCGTGAAGTGGAC                GTCA GGGC TGAC                 TTTTGGAGCAGGTTT  61 174
HMPREF9243_1191 1223273 .. 1223304 +  -6.7  -5.60556   CATAGATAAGAAAAA      GGCCAA-TTCGAGT GAACA GCTTGAATTTGGCC      TTTTTGTTTTGTATT  93 32
HMPREF9243_1201 1232892 .. 1232910 +  -2.5  -2.61383   TATTTTACCGAATTT            TAAAG-GC CTAA GCGCTTTA             CTTGTAAATACAAGT  41 47
HMPREF9243_1202 NONE
HMPREF9243_1203 NONE
HMPREF9243_1204 1236966 .. 1237008 + -13.1  -5.48787   GAAGATTAACAAAAA GCTCAGTCT--CTTTTACTGC GAC GTAGTAAAAGATAGACTGAGC TTTTTTATATATTAT 100 32
        recU NONE
HMPREF9243_1232 1263860 .. 1263885 + -19.1  -5.00616   CTAATAACGATAAAA         GAGCCTGGGAC AAAA GTCCCAGGCTC          TTTTTTAAAACACGA 100 53
HMPREF9243_1234 1266863 .. 1266886 +  -3.8  -3.00946   GCGACTGAAAAAAAG          GAGGACAGTA TCTC TACCATCCTC           TAATTTCTGAAGCAA  47 241
HMPREF9243_1238 NONE
HMPREF9243_1239 1269374 .. 1269398 +  -8.6   -4.1899   GCAATAAACACAAAA          GCGACAGG AATTAGACC CCTGTCGC          TTTTGCATAAAATAG  83 34
HMPREF9243_1241 1271962 .. 1271998 + -15.2  -4.57073   TCAGGCACCATTAAA    GGCCCGCACTAGCT CATTGACAA AGCTAGCGCGGGCC    TTTTTGGACGACATC 100 50
HMPREF9243_1248 1280146 .. 1280178 +   -10  -5.28942   TTATAATTTTCATAA     GAAA-AGGCTGGGAT AAAA ACCCCAGCCTCTTTC      TTTTTATTTAGGATC 100 103
HMPREF9243_1252 NONE
HMPREF9243_1253 1283864 .. 1283883 +  -8.6  -5.14965   AAAATGTTTTCTTAA            CGCTTATC TAAG GGTAAGCG             TTTTTTCATAAGGCT 100 42
HMPREF9243_1257 1288069 .. 1288081 +  -3.4  -2.59431   CACATCCAAGCATTA                GATG AAGCC CATC                TGGCTTATGAACAAA  43 312
HMPREF9243_1259 1289822 .. 1289871 + -22.6  -4.86293   GCCAATGAGCAAGTA AAAAAGGAGCAACTTCAGTGAA AGATTA TTCACTGAAGTTGCTCCTTTTC TTTTAGTTTTTATTG 100 41
HMPREF9243_1271 1301638 .. 1301648 +    -4  -3.65902   TGTCAGCTCTCCCCT                 CAAT GAA ATTG                 TTTGCATCCAATAGG  54 1
        uppP 1302616 .. 1302641 + -19.1  -4.56597   AATGGCTAAACGAAA         GAGCCTGGGAC AAAA GTCCCAGGCTC          TTTTTAAAACACGAA 100 48
        phoU 1307410 .. 1307439 + -11.6   -5.1383   TTTTCACTTTATTAG       GTGCTGATGAAC ATTATG GTTTATCAGCAC        TTTTTATATATTCTT 100 55
HMPREF9243_1283 1312995 .. 1313005 +  -2.4  -4.89339   TGGGGCACTCTTACA                 GGTC ATA GTCC                 TTTTTATGAATCCTT  66 167
HMPREF9243_1300 1328501 .. 1328543 + -12.9  -4.96646   AAATTATTAAGAAAA GACCTATCCACTAACTAAGG TAAT CCTTAGCTAG-GGACAGGTC TTTTTGGTTCTATAA 100 240
HMPREF9243_1305 1331695 .. 1331709 +  -4.2  -3.49668   AGTAGACTAAAGAAA               TTCTCC ATT GGCGAA               TTATCTAAGCAATTT  55 206
HMPREF9243_1341 NONE
HMPREF9243_1342 1348460 .. 1348482 +  -8.4  -4.81212   TTGCATAAACAAAAA           CCGCAGCTAA TGA TTGCCTGCGG           TTTTCTTATGCTAGG  95 42
HMPREF9243_1360 1366317 .. 1366364 +  -2.9  -4.45696   CGAAACATATAAAAA CACCAGCTTAAGAAGTTAAGCAA GTAT TAGCTT--CTCATTAAGCTGGTG TCTTTTTTATTTCAA  60 73
HMPREF9243_1369 1371629 .. 1371654 + -19.1   -4.4595   TCACCACTACAGAAA         GAGCCTGGGAC TTTT GTCCCAGGCTC          TTTTGACTTTTGTCA 100 113
HMPREF9243_1381 1388379 .. 1388389 +  -2.6    -3.154   AATCGGACAAAACGT                 TATA AGA TATA                 CTTTGTTGCTAACTT  45 21
HMPREF9243_1382 1388653 .. 1388690 + -10.7  -5.14563   AGGTTCTATAATATT   TGGTGTTGATGG-GAGCC AAC GGCTCTTCATTGGCACCA   TTTTTTGATACACAA 100 176
HMPREF9243_1383 1390310 .. 1390326 +  -7.2  -5.72616   CCATGCCAGCACGTA              GCGCCC CTCGA GGGTGC              TTTTTTTCTATAACT 100 292
HMPREF9243_1391 NONE
HMPREF9243_1392 1400168 .. 1400220 + -16.5  -2.66748   AGTAAGCATTCAAAC TAAAACACCCCCTAGCTGCTAGC GCATTAA GCGAACAGTTAGGGGGTGTTTTG ATGTCTTTATTATGC 100 48
HMPREF9243_1395 1402827 .. 1402851 +  -8.5  -5.21506   AATAAACGCTAAAAA          GCTTGCCTCTC TTC GATTGGCAAGC          TTTTTATATTGTTCT 100 40
HMPREF9243_1403 1410350 .. 1410370 + -13.3   -5.5604   GACTTTATATATAGT            GAGTTGGCC TTT GGCCAGCTC            TTTTTTGTTGCTTAC 100 106
HMPREF9243_1443 1448469 .. 1448506 + -19.5  -4.45771   CAAACATACTAAGAT   TAGCTCGAAGGTAAATC GACG GATTTATCTTCGAGCTA    TTTCTATTTTCAGAT 100 58
HMPREF9243_1444 1450179 .. 1450220 + -18.9  -2.78891   CTATAGCAACTGGAA CAAACGATATGCGATAGGC GCAA GCCTATCGCACATCGTTCG  TAGTTGGGTTCGACT 100 275
HMPREF9243_1458 1465968 .. 1465982 +  -7.2  -2.75064   GGTTTTTTATTGGGA               TTATCC TCG GGATAA               TAATTCAATGGCACC  58 155
HMPREF9243_1465 NONE
HMPREF9243_1466 1471880 .. 1471901 + -11.6  -5.61596   TTTTCCATATAAAAA           GCGATCCG CAAAAA CGGATCGC            TTTTTTTATAGCAAT 100 141
        spxA 1474835 .. 1474848 +  -2.3  -5.46698   AGCTTTTTGAATGGA               GGGTG GAGG TGCCC                TTTTTTCATTTTAGA  76 80
HMPREF9243_1471 1475579 .. 1475630 +   -28   -4.4648   AACCAGGTCGCTCAA TTATTCCAATAAAAAAATCCAGCT CATC AGCTGGATTTTTTTATTGGAATAA TTTTCTCGTAGGCAT 100 14
HMPREF9243_1476 1479649 .. 1479664 +  -6.1  -5.06103   TTATAAACATAAAAA              GGACC GCTGTG GGTCC               TTTTTTAACACTTAT  80 57
HMPREF9243_1495 NONE
HMPREF9243_1496 1496825 .. 1496836 +  -2.2  -2.50074   GCTTCCTTTAATCGG                CGAG TGAA TTCG                 ATATCTTCTGGGGAG  40 100
HMPREF9243_1508 1510960 .. 1510988 +  -2.5  -5.96521   AAAACAATTAGAAAA       TGCATCCAATCA TCGTTT TGAA-GGATGCA        TTTTTTTTGCTTGAT  90 39
HMPREF9243_1511 1512776 .. 1512793 + -11.3  -5.43866   ATGATGACTAAAAAA             TGCGCTC GCTG GAGCGCA              TTTTTTTAACGGTTG 100 30
         zwf 1515966 .. 1515991 +  -9.8  -4.20042   CTATATCTGAAAAAA         GAGGTTGCAA TTAATC TTGCAGCCTC          TTTTAAAATATTCAT  86 201
HMPREF9243_1563 1571591 .. 1571635 +  -6.6  -3.81414   TATCTCTAGTTTTCT TAAGCACGAAAAAAAGACCGG CTAA CCGATCTTTGTT-CGTGGTTA TTATTAGTTAAGGCT  66 32
HMPREF9243_1568 1573585 .. 1573606 +  -6.7  -3.18199   CAATTCAGCCACAAC           TGCC-TTATC ATA GATAAAGGCA           TTGACTTCAAAATTC  59 391
HMPREF9243_1575 1582600 .. 1582631 + -10.2  -5.22137   TCTGAAGCGCAAAGA      GCTCCCCATTGC AGATTGTA GCAATGGGGAAC       TTTTCTTTTGTAGTT 100 59
        rpsT 1585137 .. 1585178 +   -14  -5.82281   AGTAATTAAAAAAGC CACCGCTTCTCTTAACTGGC CTAA GCC-GTTGA-AGAAGCGGTG TTTTTTTGTGTATTT 100 36
HMPREF9243_1592 1602763 .. 1602798 +  -3.4  -2.93723   TCCGGGCATTATGGG   TCAGCTCTGGCAA-GG AAATCA CCGTTGCTAG-GCTGG    TGTCCTTAATGAGAG  44 258
HMPREF9243_1598 NONE
HMPREF9243_1599 1607833 .. 1607880 +    -3  -3.93136   TGATTACACATAAAC TTTAAACTTATCAAGAGC CGCTACGCTCTT CCTCTTGACAAGTTTAAA TTTCTGAGTAAATGT  52 41
         def 1614375 .. 1614393 +  -8.8  -3.12663   TCATTTTATCGGCTT             GAGGCAAG GAT CTTGCCCC             CTTTTGACTAATGAT  66 160
HMPREF9243_1607 1617969 .. 1617990 + -10.1  -5.56372   ACTTCATACAAAAAA           CGCAAGCCC AAGT GGACTTGCG            TTTTTCTTTTGCTTT 100 43
HMPREF9243_1615 1626002 .. 1626012 +    -4  -2.71681   ACTGCTCACAAATTC                 TGAT ATA ATCA                 TCCTTACAAGAGTTG  45 87
HMPREF9243_1616 1626413 .. 1626437 +  -7.9  -5.60993   ATGACCCATAAACTA          GAAGTTGGAAG CAC TTGCCAACTTC          TTTTTTTATGGAAAA 100 69
HMPREF9243_1617 1627850 .. 1627870 +  -8.9  -4.16943   ATTTCCGCTAAAAAA            GGGACTGTC TGA GGCAGCCCC            TTTTAAAATATAAAC  81 63
HMPREF9243_1623 1634191 .. 1634208 +  -7.7  -5.10154   CTAACAAAGACAAAA             GAGGCTT GCTA GAGCCTC              TTTTTAATTTTGCCT  93 133
HMPREF9243_1629 1642839 .. 1642866 +  -6.3  -4.87893   AACAGAAGGCAAAAA        GGAGGCTAGAA CCTTAA TTCCAGTCTCC         TTTTTGCTTGGCATT  78 232
        metK 1644702 .. 1644731 +  -8.5  -4.94992   ATGCCAAAGTAAAAA       GGCTCCTGCTCAA TCAC TCGAGGGGGAGCC        TTTTTATCGCTTTAA  95 57
         alr 1646519 .. 1646529 +  -2.6  -2.73875   TGATAGCGTGCTAAA                 TTAA TTG TTAA                 TAATATTCCACACAA  41 59
HMPREF9243_1634 1647493 .. 1647516 + -14.6  -4.81863   TCAAATTATACGAAA          GGGCTGAGGC AAGA GTCTCAGCCC           TTTTATTATCGATTT 100 51
HMPREF9243_1635 1648468 .. 1648521 + -21.4  -5.27206   TAAGTCAAAGGAAAA GTGCTTCAGGCTAGTC-GATCTTCC CTATA GGAAAATCAGACTAGTCTGAAGCAC TTTTTATTCTCTATC 100 66
HMPREF9243_1638 1651699 .. 1651714 +  -2.6  -4.59773   TAGGCAAGGATGGAT              C-CACTT GGT AAGTGAG              TTTTTGCCCCTGGCG  62 38
        proB NONE
        proA 1655017 .. 1655044 +  -8.4  -5.23765   TTAAACAAGCAAAAA        CGGAGTTGCC CACAATCA GGCTACTCCG         TTTTTCTATTATTTA 100 211
HMPREF9243_1654 1665671 .. 1665701 +  -7.7  -5.41941   AATAAAGTCAACCAA       CCAATAACCTCTT TTAAC AAGGAGTTATTGG       TTTTTCTTTCATTTG  95 36
HMPREF9243_1655 NONE
HMPREF9243_1656 1666602 .. 1666623 +  -5.1  -5.47914   GAAGATAAGGAATAA           GGCTGGG AGTGAAAA CCCAGTC            TTTTTTATGCTTTTT  88 26
HMPREF9243_1657 1668405 .. 1668435 + -12.8  -5.24003   CTTCCTGAAATAAAA       GGCGAAATTAGA CATGAAA TCTAATTTCGCC       TTTTTGGTTTTTGTT 100 45
HMPREF9243_1658 1669919 .. 1669952 + -14.8  -3.78934   GATTAATAACTAAAA     TAACCGCGACCAAGA AATGA TCT-GGTCGCGGTTA     TTATTATAAGAAGGG 100 28
        glnA 1705690 .. 1705714 + -14.4  -5.21709   GTTTTCAAAAAAAAA          GCGTGACCAA AAAAA TTGGTCACGC          TTTTTTAATATCAAA 100 48
HMPREF9243_1697 NONE
HMPREF9243_1698 1709708 .. 1709731 +  -8.9  -5.56568   TTAAGAAAGCAAAAA          CACTTGTCC GAAAAG GGGCAAGTG           TTTTTTTACTAGTCT 100 41
HMPREF9243_1701 1712613 .. 1712658 +   -15  -5.28315   TATAGTAAAAACCAA GCCACTAGGCCCTG-G-ATAAG TTTA CTTATCCACAGAGCCTAGTGGC TTTTTTGACTTTTGT 100 46
HMPREF9243_1714 1727997 .. 1728015 +  -3.1  -3.23638   TCTGGTTAATAGACG            CAGTGGCT CAAA GGCC-CTG             TTAATCGATCTTTGC  47 75
HMPREF9243_1715 1728608 .. 1728637 + -13.7  -5.42514   ACTTGACTAAAAAAA       GTGTGACCAAGCT AATC AACTTGGTCACAC        TTTTTTCATTTATAA 100 31
HMPREF9243_1717 NONE
HMPREF9243_1718 NONE
HMPREF9243_1719 NONE
HMPREF9243_1720 NONE
        cinI 1734618 .. 1734672 +   -12  -4.63932   GATAAATAAGCAATT AAAAAGTGCTAGTATCAGCCTCTTAA AAGAC TTAAGAG--TGATACTAGCACTTTTA TTTTATTGGACCGTA 100 55
HMPREF9243_1724 1738247 .. 1738285 + -16.3  -5.12474   TAACATATTGAAAAA  CAGCCTAGCTTAAGCGGA AAGT TTC-CTTAAGCTAGGCTG   TTTTTATATCTTATA 100 52
        metE NONE
        metF 1764331 .. 1764382 +  -8.2  -5.72053   AAAATTTATTATAGA TACTAA-AAAGCCCTCCTGGCTC AACAAAA GAGCTAGGAGGGCTTAGTTATTG TTTTTTATTTAATTA 100 27
HMPREF9243_1760 NONE
HMPREF9243_1761 1774787 .. 1774825 + -11.9  -5.23396   TGATAAATAACAAAA   GAGTTGACTGCAATGCT CCGTA AGCATTCCAATCAACTC   TTTTTATTAATTATT 100 49
HMPREF9243_1767 1780037 .. 1780067 +  -9.9  -5.65496   ATAAGCAAGAAAAAA       GTTCAAGCTGA TTGCTATTC TCAGCTTGAAC       TTTTTCTTTTTACTC 100 15
HMPREF9243_1769 1782712 .. 1782722 +  -6.8  -2.67016   CTTGTAATTGAAAGA                 CCTG GTC CAGG                 TAACTTTCACTGGTT  55 284
HMPREF9243_1771 NONE
HMPREF9243_1772 1784548 .. 1784591 + -14.1  -4.49337   ATTAACAACAAATAA CCGACCTCT-TGACTTAGAG GCTTA TTCTAAGTCTTAGAGGTCGG TTTTCGTTACTATTC 100 36
HMPREF9243_1778 1795038 .. 1795091 +  -3.4   -5.1286   ATAAAATCATTTAGA GCAAAG-CTGATTCTTC-TGTGCCAA AAGC TTGAAATAAGGGGAATCAGTCTTTGC TTTTTATCGTTTTTG  73 50
HMPREF9243_1779 1796766 .. 1796793 + -15.8   -2.8789   TATTATCAATAAAAA        CAAAAAACAGGC CGCG GCCTGTTTTTTG         CTTATTATAAACGTT 100 29
HMPREF9243_1783 1799692 .. 1799710 +  -3.8  -3.55444   CTGAAGTGGGTTCGT             CCATGAGT AAG ACTTCTGG             TTTAACGGCTAAGGC  52 305
HMPREF9243_1795 1813803 .. 1813840 + -16.5  -2.50575   TGATCAATAAAGAAA   TAAGCCTGATCTTACCC CAGG GGGTGAAATCAGGCTTA    CTTGCTGCCAATTTT 100 31
HMPREF9243_1799 NONE
        pnuC 1818330 .. 1818342 +  -7.7  -3.20307   TAGGACCTTATCCAA                CCAAG CTT CTTGG                TCTTCATAGTCTTGG  64 286
HMPREF9243_1804 NONE
HMPREF9243_1805 1824508 .. 1824531 +  -9.6  -5.29846   AAGTTGTCCAAAAAA          GAGGTCAGAA TTTT TCCTGACCTC           TTTTTCTTTGAAGTT 100 63
        nagB NONE
        pdxB 1832231 .. 1832268 + -12.8  -5.09895   TTCGCCTCATAAAAA   GCCACTTACCCCTTCC CTTCAA GGAAGCAGTAAGTGGC    TTTTTTACATAGCTA 100 45
HMPREF9243_1817 NONE
        iadA 1841670 .. 1841720 + -19.3  -3.46285   AAATGCCTAAAGAAG GCCGAA-TTAAAAGAGCCTGGGAC CTAT GTCCCAGGCTCTTTTTACTTAGGC TTACTCTTTAACATC 100 31
        purA 1845851 .. 1845891 +   -12  -5.24129   TGATAAAGAGAAAAA  GTAAGCTCTGACTGAGGA AGATC TCCTTAATCTGAGCTTAC  TTTTTTGTGAAAAAG 100 44
HMPREF9243_1825 1851136 .. 1851183 +  -9.2  -5.10163   AATAAAGATAAAAAA GGTATGCCTACACCAGGACTCA AGAC TAAGTCCTCCTGTGAGCATACC TTTTCTTTTAGCCTT 100 36
HMPREF9243_1831 1854790 .. 1854827 + -10.7  -5.14563   CGGTTCTATAATATT   TGGTGTTGATGG-GAGCC AAC GGCTCTTCATTGGCACCA   TTTTTTGATACACAA 100 73
HMPREF9243_1832 1856451 .. 1856475 +  -8.7  -3.17219   TATTGGCTTGATAAC          GGCAATTATTA GCT TAATAATAGCC          TTAATCCAACTTATA  71 251
HMPREF9243_1833 1856983 .. 1856994 +    -3  -3.93583   AAGCCCTTGCTTTTA                TTTC GTCA GAAA                 TTTCTAAATAAATTG  52 255
HMPREF9243_1836 NONE
HMPREF9243_1837 1860828 .. 1860875 +    -3  -3.93136   TGATTACACATAAAC TTTAAACTTATCAAGAGC CGCTACGCTCTT CCTCTTGACAAGTTTAAA TTTCTGAGTAAATGT  52 41
        brnQ 1863639 .. 1863677 + -10.3  -4.73973   GCAATAAACCAAAAA   TAGCGCAACTAGTCTCT AATAG AGGGGCCAGATGCGCTA   TTTCTTATTTTCTAT 100 34
HMPREF9243_1855 1874259 .. 1874286 +  -6.2  -5.08255   ACATAACAGGAAAAA        GCCATGCTAGCT TTCC AGCCGCCATGGC         TTTTCTTTTGGCAAT  83 55
HMPREF9243_1856 1874703 .. 1874726 +  -3.9  -5.56264   TATAATCATTAAAAA          CATGCT-GTC TTAGT GGCTAGCATG          TTTTTTGTATTTCAA  81 58
HMPREF9243_1857 1876118 .. 1876148 +  -5.5  -5.69793   AATATAATTAAAAAA       TGCTTCCGC ATTCTAAGTGTTA GCGGAAGCA       TTTTTTATTTAATAT  88 60
        brnQ 1878526 .. 1878565 + -16.6   -5.4505   ACTTAATTAACCAAG  ACCGCTAAGGCTTAGC AGATTGTA GCTAAGCCTTAGCGGC   TTTTTTATTCAACAA 100 42
HMPREF9243_1860 1879103 .. 1879140 +  -9.9   -4.9792   CAATAATACAGAAAA   GAGTGTGC-CCAGCCAAT AAA GTCGGCTAGAGCACACTC   TTTTTGTCTAAAGTA 100 35
HMPREF9243_1862 1881330 .. 1881368 +  -9.8  -4.64613   TAGATCCAGTAAAAA  GCACTTAAATTGCAGCT TTTATC AGC-GCCATTTAAGTGC   TTTTACTTATTTCTA  91 38
HMPREF9243_1865 1885238 .. 1885259 + -12.3  -5.64304   TAAACCAAGCATCGA           GGCTGTGAC TCAG GTCGCAGCC            TTTTTTCTTATCTTC 100 42
HMPREF9243_1866 1886398 .. 1886420 + -12.1   -5.2189   CTGCATTAACAAAAA           CCATGCTGA AAAAA TCAGCATGG           TTTTTTACTGCTTAC 100 57
HMPREF9243_1870 1889448 .. 1889477 + -10.7  -3.46106   AAAGGCTAATAAAAA       CAACCGGCAGAAA TTTC TCTCTGCCGGCTG        TCTTTACACTTTTAG  80 32
HMPREF9243_1880 NONE
HMPREF9243_1881 1899063 .. 1899095 +  -4.1  -4.72986   ATATTAAGGCCATTT      TTGCTAAAGCGACTG AAA CAGACGCTGTACTAA      TTTTTGATGAAGCTG  69 302
HMPREF9243_1882 NONE
HMPREF9243_1883 1900704 .. 1900750 +  -8.2  -5.72622   ACCGCAGGTAGAAAA GCACTTGTCCTTAGAACATTAA TTT TTAATGTTTTATGGATAAAGGC TTTTTTATTTGTAAA 100 365
        trpD NONE
        trpC 1903289 .. 1903314 +  -3.3  -3.53343   GCTGGTAGCGGCAAG         TCCTTTAACTG GAAA CTCTTAAAGGA          TTTCGACCGCCCCTT  50 423
        trpB NONE
        trpA 1905452 .. 1905468 +  -8.7  -5.35224   ATACTCATTTCTCTA              GCCACTT AAA AGGTGGC              TTTTATTTTTATACC 100 51
HMPREF9243_1892 NONE
HMPREF9243_1893 1906963 .. 1906997 + -12.9  -4.27211   ATTGAATAATAGAAA    GCGGCACAGCCTCGTT AATT GACGCG-CTGTGCCGC     TTTGATTTGTTTAAC  95 32
HMPREF9243_1896 NONE
         tag NONE
HMPREF9243_1900 NONE
HMPREF9243_1901 1915243 .. 1915269 +  -5.8  -2.64872   CTCTACCTACTTTAC         CGTCAATCGACT CGG AGGTGATGGACG         ATCTTATTAAGTGCC  54 5
HMPREF9243_1902 NONE
HMPREF9243_1903 1917337 .. 1917381 + -11.1  -4.51799   CAAATTCTAAAAGAA AAAGAGAATCTACAAATTA CTTAAGA TGATTTGTAGATTCTCTTA TTTTATACCTTTAAT  95 76
HMPREF9243_1914 NONE
HMPREF9243_1915 NONE
HMPREF9243_1916 NONE
HMPREF9243_1917 1931404 .. 1931447 +  -3.8   -4.7871   ATATGATCGCAAAAA GAGAGAGATACCTATGCCAT CGTC ATGACATAGCGCCCTCTCTC TTTTTAGTCCTAATT  69 87
HMPREF9243_1920 1933571 .. 1933590 +  -6.5  -3.73072   CTGGAAAACTCTATT            TAGATCC TTACAT GGATCTA             TTTAATCGAGAAATT  66 482
HMPREF9243_1927 1940012 .. 1940054 +    -5  -4.96848   AACTCAAAAACAAAA GAGACACAGAAGTATATAG CCCTAA CTACACGCT-CTGTGTCTC TTTTTATGTGGAAAA  76 75
HMPREF9243_1945 NONE
HMPREF9243_1946 1956740 .. 1956768 +  -7.6  -5.49568   AACAACAGTTAAAAA        GCGTTATTTC CCATTTTAA GAAATAACGC        TTTTTCTTTTGCCTT 100 42
HMPREF9243_1965 1984743 .. 1984766 + -12.5  -4.68593   AAACATTACCAAAAA          GGGACTGTG CTCGAT CACAGTCCC           TTTTTAGCTAATAGG 100 41
HMPREF9243_1980 2001736 .. 2001771 + -12.7   -3.8457   TTAAATAAACAAAAA    TGCCTCAGCCC-TGCG CTTAT TGCATGGGTTGAGGCA    TATTTATTATTCATC  95 44
HMPREF9243_1984 2005408 .. 2005433 + -14.1  -4.11216   CCTAGCGAGCTTCAA         GAGTCTGGGAC AAAA GTCTCAGACTC          TTTTCAAAATACGAA 100 125
         ppc 2012067 .. 2012106 + -20.4  -5.23016   TCCTTAAATAAAAAA  GTGTTTCCGGAAAGCT-TA AAT TACAGCTTTCCGGAAACAC  TTTTTTCAATTCTTT 100 41
HMPREF9243_1998 2021433 .. 2021467 + -11.4  -5.18726   CTATAGTAAAAATAA     GACGCTGGTGAAGC TACACAT GCTCCACCAGCGCC     TTTTTCTTGTGGACA 100 54
HMPREF9243_2006 NONE
        lytT NONE
HMPREF9243_2008 NONE
HMPREF9243_2009 2035428 .. 2035453 + -10.6  -5.24989   GCACCCTTCAAAAAA         TCACTCTAGA ATGTGC TCTAGAGTGA          TTTTTTCATGTCTAC 100 58
HMPREF9243_2015 NONE
HMPREF9243_2016 NONE
HMPREF9243_2017 NONE
HMPREF9243_2018 2044304 .. 2044346 +   -18  -5.04597   TAAAGTCCGCTGTAG TGACCCCCAAAAGTTGGACT AAG AATTCAACTTTTGGGGGTTA TTTTTATGTCTAAAT 100 62
HMPREF9243_2019 NONE
HMPREF9243_2020 2045951 .. 2045968 +  -4.1  -5.07941   TTATTGGGGTCACCA             TACGCCT TGGG AGGAGTA              TTTTTATGTCCTTTT  74 198
HMPREF9243_2029 2055748 .. 2055763 +  -6.1   -5.4833   AAGAGTAGAAGAAAA              GACGC CTGAGC GCGTC               TTTTTTATTACCTAA  91 156
HMPREF9243_2032 2060797 .. 2060825 +  -3.8  -5.49809   AACTTTGATAAGAAA        CCGTTCCCCT AGAATAAAA ATGGGGACGG        TTTTTTTGCGGTTTC  81 62
HMPREF9243_2033 2061288 .. 2061314 + -13.2   -5.4505   CCATTCCCTTCGAAA         CAGAGAGAAACT CTA AGTTTTTCTCTG         TTTTTTATTAAGGAG 100 71
HMPREF9243_2034 2062130 .. 2062155 + -19.1  -4.92777   ATAAATAAAAAATAA         GAGCCTGGGAC TTTT GTCCCAGGCTC          TTTTTACTTGGTCTT 100 44
        rpoN 2068979 .. 2069010 +  -5.8  -5.31545   ATCGACAAACAAAAA      GTGCCTCCCTCACT CAAC AGTGAAAGAGACAC       TTTTTTCGTCTTGTT  89 61
HMPREF9243_2050 NONE
HMPREF9243_2051 NONE
HMPREF9243_2052 NONE
HMPREF9243_2053 2080633 .. 2080650 +  -9.1    -5.626   AAAATTTTTAACAAA             GTCGAGC GCAA GCTCGGC              TTTTTTTATGCCCTA   0 39
        rpmH 2073942 .. 2073961 -  -7.9  -5.99154   CACTAAATAAAAAAA            GACCACA GCGCTT TGTGGTC             TTATGCTGAAAGTCG 100 26
        rnpA 2073413 .. 2073451 -  -2.3  -4.17425   ATAACGATCCCAAAA  GCCCGTGGAAT-CAGCTG TAAT CGGCTCCATACCACCGGC   TCTGGCACACCCACT  53 98
HMPREF9243_2045 NONE
HMPREF9243_2044 2071617 .. 2071640 -   -11  -5.73672   AAAGAACCAAAAAAA          CTCCAGCGCC ATCA GACACTGGAG           TTCTTCTTACCATAT 100 43
         hbd NONE
HMPREF9243_2042 2068979 .. 2069010 - -12.4  -5.38958   ATCGACAAACAAAAA      GTGCCTCCCTCACT CAAC AGTGAAAGAGACAC       TTTTTTCGTCTTGTT 100 87
HMPREF9243_2040 NONE
HMPREF9243_2039 NONE
HMPREF9243_2038 2065700 .. 2065711 -    -3  -3.67597   TTTTTGACCTAATAA                TTTC ATGA GAAA                 AAGTCATCCTCCTCT  50 16
HMPREF9243_2037 2064786 .. 2064805 -  -7.1  -5.00616   CCTCGCTCTAAAAAA            GGCTACG TGTAGT CGCAGCC             TCTTATCTTGTGATT  85 77
        cadA 2057364 .. 2057375 -  -4.4  -3.26864   AAAATTCCATAAAAT                CATG AGAC CATG                 GTTAACTTCGTTTAT  51 183
HMPREF9243_2030 2055853 .. 2055887 - -14.3  -3.38836   ACTGTCAAAATAAAG     CCCGCCCAAGGACTG TTGAT CAATCTCTGGGCGGG     TCTTATTGAAGGAGT 100 63
HMPREF9243_2028 2053907 .. 2053917 -  -4.6  -4.09963   GCCTAACAATAACAA                 CCCC CAT GGGA                 AAAAAGGTCAGAAAT  61 2
        cbiM NONE
        cbiN 2052790 .. 2052815 -  -9.1  -4.07687   ATTTGCTTTTTAAAA         GAAGCTGAG CACAGAAC CTCAGCTTC          TTTATTGAGAATACA  81 51
HMPREF9243_2025 2052079 .. 2052098 -  -3.6  -2.75159   GTACATTAAACTAAT            CCAGG-TAA AAT TCATCCTGG            TAGAGTTTCAAATCT  45 1
HMPREF9243_2024 2051106 .. 2051143 -  -3.5  -5.52096   AAACTCAATAAAAAA   GTGCCTTTTCTGC CCAGTTTATCCT GCAGAAACGACAC    TTTGACTGTCTTAAT  79 134
        trmE 2049581 .. 2049612 -    -3  -4.82901   TCCTCTTCACAAAAA      GGCG-ACGAATTCTC TAC GCAAATTCTTTCGCC      TTTTTGCTCCAGAGG  65 77
HMPREF9243_2022 2048128 .. 2048165 -  -4.9  -5.22794   ATAAGCACTAAAAAA   GTGTCCACTCCGCCCC TTAAATC GAGACGGAA-AGACAC   TTTGACTGTCTAGCT  79 114
        gidA 2045896 .. 2045916 - -13.3   -5.5604   GTAAGCAACAAAAAA            GAGCTGGCC AAA GGCCAACTC            ACTATATATAAAGTC 100 201
HMPREF9243_2012 NONE
HMPREF9243_2011 2036670 .. 2036690 -    -4   -5.4505   TTTTCCAATAAAAAA           TCCTGC-CG CCCG CATGCAGGA            TCTTAACAAAAAAGT  81 88
HMPREF9243_2010 2035428 .. 2035453 - -11.3  -5.02074   GCACCCTTCAAAAAA         TCACTCTAGAA TGTG CTCTAGAGTGA          TTTTTTCATGTCTAC 100 50
        gidB 2030539 .. 2030576 -  -7.2  -5.56264   CGTAAACACAAAAAA   TCTGCTAAGACTTA AGTCATTCAA TAAGTCTTAGCAGG    TAGATAAGAAAGCTT 100 71
HMPREF9243_2004 2027373 .. 2027410 - -10.7  -5.20633   AAAAACAGAGAAAAA   GTGCCTATGGCCCGTGTC AAT AACACAAGCC-TAAGCAC   TTTTAGGAGTGATTC 100 115
HMPREF9243_2003 NONE
        pepT 2024226 .. 2024249 -  -6.8  -5.67283   AAGGCAAAGAAAAAA          TGCCATACCA TCAC TGATATGACA           TTGTTTATCGACATG  93 62
HMPREF9243_2001 NONE
HMPREF9243_2000 NONE
HMPREF9243_1999 2021430 .. 2021470 - -14.1  -4.81551   TAGCTATAGTAAAAA  TAAGACGCTGGTGAAGC TACACAT GCTCCACCAGCGCCTTT  TTCTTGTGGACATTA 100 147
HMPREF9243_1997 2018137 .. 2018164 - -10.6   -5.8187   TAGCCAAGAAAAAAA        GAGAGCCGGTCC CAAA AGACCAACTCTC         TAGAAAATTCTTTAG 100 53
HMPREF9243_1996 NONE
HMPREF9243_1995 2016026 .. 2016041 -    -9  -5.30155   TTAGCAATGAAAAAA              GGAACG AATG CGTTCC               TTAATCCCCGCATTT 100 299
         soj NONE
       spo0J NONE
HMPREF9243_1992 NONE
        ychF NONE
HMPREF9243_1990 2012067 .. 2012106 - -20.4  -5.63517   TCCTTAAATAAAAAA  GTGTTTCCGGAAAGCT-TA AAT TACAGCTTTCCGGAAACAC  TTTTTTCAATTCTTT 100 47
HMPREF9243_1988 2007813 .. 2007855 -   -18  -5.04597   ATTTAGACATAAAAA TAACCCCCAAAAGTTGAATT CTT AGTCCAACTTTTGGGGGTCA CTACAAATCGCCCGA 100 26
HMPREF9243_1987 2006795 .. 2006814 -  -6.5  -3.73072   AATTTCTCGATTAAA            TAGATCC ATGTAA GGATCTA             AATAGAGTTTTCCAG  66 482
HMPREF9243_1985 2005707 .. 2005740 -  -6.9  -5.34632   AATAAAAGACAAAAA     GCGAGCCTAAGTGATT ATT AAT-ACCTAAGCTCAC     TTGGGAATAGTCCCT  95 57
         dut NONE
        radA NONE
HMPREF9243_1981 2001736 .. 2001771 -  -9.8   -5.5454   TTAAATAAACAAAAA    TGCCTCAGCCC-TGC GCTTATT GCATGGGTTGAGGCA    TATTTATTATTCATC 100 32
HMPREF9243_1979 NONE
HMPREF9243_1978 1997038 .. 1997061 -  -9.7  -5.67283   AATTTAAACAAAAAA          GAACTGAGA TAAAAC TCTCAGTTC           CTTTGATAGAAGTAT 100 172
HMPREF9243_1977 1995343 .. 1995370 -  -9.2  -4.99035   GTAGCCATAGAAAAA        GCCACCCA-TCTT AGA ATGAATGGGTGGC        TTTATTGTTTATCCA 100 402
HMPREF9243_1976 1993855 .. 1993866 -    -3  -4.46581   TAAAATTTGACAAAA                GAAT AAGT ATTC                 AATTGCTGATACTCA  60 205
HMPREF9243_1975 1992582 .. 1992616 - -14.4  -3.72374   TCCTATTAACAAACA     GTAAGCAGAGTCATCC CTT GGACAACTCTGCTTGC     TTTAATTTTTAAATA 100 54
HMPREF9243_1974 NONE
HMPREF9243_1973 NONE
HMPREF9243_1972 1989827 .. 1989841 -  -5.7  -3.36749   GATTTCTAACATGAA               CTAGG CACCT CCTAG               GTAGGCTTCGATAAC  57 11
HMPREF9243_1971 1989041 .. 1989078 -  -7.7   -5.2853   TAGGTAAAAACAAAA   CCCCTAGACACTATGAC ACTT GTCAGAGCGGCTAAGAG    GTTATGCTAGGTCTT  95 63
HMPREF9243_1967 NONE
HMPREF9243_1966 1984731 .. 1984779 - -14.3  -4.40333   GCCAAAGAATAGAAA CATTA-CCAAAAAGGGACTGTG CTCGAT CACAGTCCCTTTTTAGCTAATA GGTGGAAGTCTTCAC 100 40
HMPREF9243_1964 NONE
HMPREF9243_1963 1982907 .. 1982928 - -11.7  -4.78149   TTCATAATTTAAAAA           GAAGCTGAA TTTT TTCAGCTTC            CCTATTTTTTAATAA 100 34
        pcrA NONE
        ligA 1978283 .. 1978297 -  -2.8  -2.64134   CACGAAATCAAGTGA               CTAGGA ATC TTCTAG               GTGACTCAACATCTC  41 11
HMPREF9243_1960 1977003 .. 1977036 -  -8.9  -4.56597   CGTCCGCTTCAAAAA     CTGGTA-ACGCTCAGC TTT GCTGAGCTTATCCCAG     TTTTCTCCAGCGATT  90 72
        gatC NONE
        gatA NONE
        gatB 1973529 .. 1973584 - -17.3   -2.8071   CTAAGAACAAAGTCA TCATTTCCAAGCAAAAATGCCACACC TGGTT GATGTGGCATTTTT-CTTGGATACGA TTAATGTTCCTTAAC 100 36
HMPREF9243_1956 NONE
HMPREF9243_1955 1971672 .. 1971719 -    -3  -3.93136   ACATTTACTCAGAAA TTTAAACTTGTCAAGAGG AAGAGCGTAGCG GCTCTTGATAAGTTTAAA GTTTATGTGTAATCA  52 41
HMPREF9243_1954 1963844 .. 1963864 - -11.9    -5.243   CAAATTACGAAAAAA            GCCGAAGTA AAA CACTTCGGC            TAAAAAATCTTAAAC 100 57
        phnD 1962409 .. 1962444 -  -4.9   -4.5394   ATAGAAATAGGAAAA    GTGCATTCAACCAATA GAGGG CATCGATTGAA-GCAC    TTTTTATCCTAATAA  71 77
        phnC NONE
        phnE NONE
        phnE NONE
HMPREF9243_1949 NONE
HMPREF9243_1948 NONE
        luxS 1956740 .. 1956768 - -11.9  -4.77216   AACAACAGTTAAAAA        GCGTTATTTCCCA TTT TAAGAAATAACGC        TTTTTCTTTTGCCTT 100 49
        rumA 1953435 .. 1953447 -  -3.3  -2.65815   GTGACATTGATACTA                CCCAC TCA GTGGT                TCACTATTCCCACAT  43 51
HMPREF9243_1943 1952839 .. 1952878 -  -5.8   -5.0925   TCTGAAAAGCAAAAA  GCGATGTCCTTAAAAAGT CTCA ACTTCTCAAGAACCTCGT   TATTATGCTATTTAT  83 179
HMPREF9243_1942 NONE
HMPREF9243_1941 1951768 .. 1951783 -  -4.6  -5.18357   CAATCCACTAAAAAA              GCCCCC TCAC AGGAGC               TTCTCTCTACACTTA  76 99
HMPREF9243_1940 NONE
HMPREF9243_1939 NONE
HMPREF9243_1938 1947966 .. 1947981 -  -3.9  -2.81535   TAGGCAAAGACATCA              CGGCC ATGAAA GACCG               ATATTTCCTCCGTCC  46 484
HMPREF9243_1935 1946571 .. 1946586 -    -9  -5.47159   CGCCAACAGAAAAAA              GCTCCA ATCC TGGAGC               CTTTCTAACATTTTC 100 79
HMPREF9243_1934 NONE
HMPREF9243_1933 NONE
HMPREF9243_1932 1943289 .. 1943303 -    -5  -2.70932   CTTTTCTGCTAACTA               TTCGGA TAT TCCAAA               CTGTTGGCTCTCTAT  49 44
HMPREF9243_1931 NONE
HMPREF9243_1930 1941403 .. 1941423 -  -5.6  -3.61715   TACCTCTTGTAAGAA            GTTTTAAA GCTGA TTTAAAAC            TTCTTTTCACTAGCA  58 68
HMPREF9243_1929 1940788 .. 1940816 -  -3.2  -5.22006   TCATTATAACAAAAA       GAGCGACCTTCAGT TGA AC-GA-GGTCGCTT       GCCTATCCTAGTGAA  73 71
HMPREF9243_1928 1940012 .. 1940054 -  -7.9  -5.29885   AACTCAAAAACAAAA GAGACACAGAAGTATATAGC CCTA ACTACACGCT-CTGTGTCTC TTTTTATGTGGAAAA  95 53
        rumA 1937749 .. 1937764 - -10.4  -5.68438   TTATCAAACAAAAAA              GCCCCA TCTA TGGGGC               TTTCTTCAACTTCAT 100 59
HMPREF9243_1925 NONE
HMPREF9243_1924 NONE
HMPREF9243_1923 NONE
HMPREF9243_1922 1934121 .. 1934141 - -13.3   -5.5604   GTAAGCAACAAAAAA            GAGCTGGCC AAA GGCCAACTC            ACTATATATAAAGTC 100 175
HMPREF9243_1919 NONE
HMPREF9243_1918 1931404 .. 1931447 -  -8.2  -4.63928   ATATGATCGCAAAAA GAGAGAGATACCTATGCCAT CGTC ATGACATAGCGCCCTCTCTC TTTTTAGTCCTAATT  88 35
HMPREF9243_1913 1925437 .. 1925451 -  -4.2  -3.09096   ACTATATAAATCATA               GCTTCA ACC TGTAGC               CAATGCCGCGGACGG  50 6
HMPREF9243_1912 1924566 .. 1924580 -  -2.1  -4.05669   AAGCGGATAAAAAGA               GAAGA AATGG TCTCC               GCGATTACTTCCCCC  53 41
HMPREF9243_1911 NONE
HMPREF9243_1910 1921332 .. 1921368 -  -2.9   -5.7946   TCCTCAATAAAAAAA    CCGACTTTCCGCCTCTA AAA CAGGCTCAAAAAGTCGG    TTACTTTTTATTCAA  85 47
HMPREF9243_1907 1920423 .. 1920470 - -22.4  -5.07652   TCCTCCAAAATAAAA TAAGCACTTGCCCCTCATTCGT TAAT ACGAATAAAGGACAAGTGCTTA ACCTGCGGTGCCACC 100 319
HMPREF9243_1906 1920078 .. 1920091 -  -2.3  -3.17194   ATCTCCTTAACTTAA               CGGCA CAAC TGTCG                TTTCAGCGTGGCTAA  43 3
HMPREF9243_1905 NONE
HMPREF9243_1904 1917340 .. 1917378 - -11.3  -5.46706   ATTCTAAAAGAAAAA   GAGAATCTACAAATTAC TTAAG ATGATTTGTAGATTCTC   TTATTTTATACCTTT 100 184
HMPREF9243_1899 1912633 .. 1912648 -  -6.8  -5.39721   TCAGCATACAAAAAA              GCCCCT CTGC AGGAGC               TTCACCTAGTTATGA  91 70
HMPREF9243_1898 1909369 .. 1909393 -  -2.8  -3.36117   TGAATTAGACAAAAC         GTCGAGCCCCT TATC AGAGGCT-GTC          TCTAAAGGCCTCAAA  46 188
HMPREF9243_1895 1907880 .. 1907908 -  -7.5  -4.85195   AAAAGAAGTTAAAAA       CTCCGCCCA-CT TGTACG AGCTGGGCGGAA        TTTTTTATTAAAAGT  88 69
HMPREF9243_1894 1906963 .. 1906997 - -12.2  -4.34866   ATTGAATAATAGAAA    GCGGCACAGCCTCGT TAATTG ACGCG-CTGTGCCGC     TTTGATTTGTTTAAC  93 44
HMPREF9243_1891 1905043 .. 1905057 -  -5.6  -4.23674   CCTTACGAAGAGAAA               GGCGAG CTC CTCCCC               TATAGTCAGAAACAT  67 417
HMPREF9243_1879 NONE
HMPREF9243_1878 1896358 .. 1896395 -  -7.9  -6.04953   ATAGAAAGAAAAAAA   GAGCCCTGCTTTTATCTA AAC TA-ACAAAAGCAGGCCCC   AAACTTACAAAATTG 100 51
HMPREF9243_1877 NONE
HMPREF9243_1876 1893493 .. 1893514 -  -8.7  -3.28785   TTTCAAAATATCCAA           GAAGGGCTG GCCC CAGCCTTTC            TCTTCCTTTCGATAT  71 89
HMPREF9243_1873 1891356 .. 1891368 -  -2.6  -5.38497   ATGCAAAGCAAAAAA                GACC CTAAC GGCC                CCAAAAGCTCTGTAA  74 92
         fba 1890201 .. 1890223 - -10.6  -5.36441   TGCTTATAGAAAAAA           GGACTGCGAC TAA GTCACAATCC           CTTCTTTTTATGTAT 100 51
HMPREF9243_1871 1889448 .. 1889477 - -15.1  -5.11112   AAAGGCTAATAAAAA       CAACCGGCAGAAA TTTC TCTCTGCCGGCTG        TCTTTACACTTTTAG 100 56
HMPREF9243_1869 1888446 .. 1888480 -  -7.2   -5.4387   ACATAAATGAAAAAA     TCGCCTAAGCAGAC ATCTGTG GTCTCCTCAAGCGA     TTTTATGCGTTAACT 100 69
HMPREF9243_1868 1886998 .. 1887017 -  -6.4  -5.24796   CTTATACAACAAAAA            GCTGCGAT CGAA ACCACAGC             TTTTCAGTCATTTTC  86 61
HMPREF9243_1867 1886398 .. 1886420 - -12.1   -5.1356   CTGCATTAACAAAAA           CCATGCTGA AAAAA TCAGCATGG           TTTTTTACTGCTTAC 100 63
HMPREF9243_1861 1879096 .. 1879146 - -14.4  -3.50119   GATTAACCAATAATA CAGAAAAGAGTGTGC-CCAGCCAA TAAAG TCGGCTAGAGCACACTCTTTT-TG TCTAAAGTATTGGAT 100 40
HMPREF9243_1858 1876118 .. 1876148 -  -5.5   -5.3671   AATATAATTAAAAAA       TGCTTCCGC ATTCTAAGTGTTA GCGGAAGCA       TTTTTTATTTAATAT  86 34
HMPREF9243_1854 1872014 .. 1872027 -  -5.3  -2.78384   TGGCTGGTCACCATA               TTAGC CGCA GCTAA                ATTATGCCAGTGGCG  52 465
HMPREF9243_1851 1869905 .. 1869930 -  -6.1  -5.56264   TCCAAATAGAAAAAA         CAAGCCAGGCC TTAT AGCTTAGCTTG          CTTCTCACTTTAAAC  91 49
HMPREF9243_1850 NONE
HMPREF9243_1849 1868845 .. 1868858 -  -2.3  -3.05268   TAAAATCGACATACA               CAGGA TCAC CCCCG                CATGTACGGGAAAAA  42 55
HMPREF9243_1848 NONE
HMPREF9243_1847 1867841 .. 1867854 -  -5.9  -2.55351   TCCTTTCAGATTAAC               CCCGC ATGT GCGAG                AAAAGCTCTTGACCT  54 417
HMPREF9243_1846 NONE
HMPREF9243_1845 1867136 .. 1867154 -    -6   -5.5074   TAAGTTAATAAAAAA             GAGACTTC AAT AAAGCCTC             CAATAAATCAAATAT  91 90
HMPREF9243_1844 NONE
HMPREF9243_1843 1866233 .. 1866253 -  -5.5  -2.96452   ACTGCCATAATGATA            GCCTTTCTA GAC TAAAAAAGC            GTCGTTTGTTGGAAA  53 16
HMPREF9243_1842 NONE
HMPREF9243_1841 NONE
HMPREF9243_1840 1863639 .. 1863677 -  -8.1  -5.09521   GCAATAAACCAAAAA   TAGCGCAACTAGTCTCT AATAG AGGGGCCAGATGCGCTA   TTTCTTATTTTCTAT 100 49
HMPREF9243_1838 1860930 .. 1860950 - -13.3   -5.5604   GTAAGCAACAAAAAA            GAGCTGGCC AAA GGCCAACTC            ACTATATATAAAGTC 100 118
HMPREF9243_1835 NONE
         xth 1856516 .. 1856534 -  -9.5  -3.73953   AGTAGCTTTACCAAA             CGGGCGC CTTGT GCGCCCA             ACCTTTGCTATTATT  81 457
        yeaZ NONE
        rimI 1852933 .. 1852948 -  -3.2  -4.56597   GCCTCCTGGTAAAAA              GCCAAC ACCT GCTGAC               TAATCCCGGGTATCT  64 25
HMPREF9243_1828 NONE
HMPREF9243_1827 NONE
HMPREF9243_1826 1851136 .. 1851183 - -11.4  -5.61913   AATAAAGATAAAAAA GGTATGCCTACACCAGGACTCA AGAC TAAGTCCTCCTGTGAGCATACC TTTTCTTTTAGCCTT 100 33
HMPREF9243_1824 1848209 .. 1848226 -  -4.8  -5.58179   GATGACAAGAAAAAA             GCCCTC AATTAA GAGGAC              TTTACTAAGCGACTG  88 95
        groS NONE
        groL 1845906 .. 1845928 - -17.8  -4.56597   CTTTTTTGTGAAAAA           GCGCTTGGGA AAA TCCCAAGCGC           TTTTCAATCTTTATC 100 57
        purB 1842742 .. 1842755 -  -2.5  -4.92756   AGCAGGAAAAAGAAA               TTATT TAAA AATAA                CCAACTAGACTAATC  68 30
HMPREF9243_1819 1841670 .. 1841720 - -19.3   -2.9632   AAATGCCTAAAGAAG GCCGAA-TTAAAAGAGCCTGGGAC CTAT GTCCCAGGCTCTTTTTACTTAGGC TTACTCTTTAACATC 100 26
HMPREF9243_1816 1836852 .. 1836873 - -10.1  -5.74288   ATAAACAACAAAAAA           GCCCACCTC CTAA GAGGCGGAC            TTCTTCCACGGTACC 100 325
HMPREF9243_1814 1835238 .. 1835252 -  -2.8  -3.75437   AAGTATTCGACCAAA               GTGCCA TTT TAACAC               AACCTTTTCTAAAAT  50 69
        argH NONE
HMPREF9243_1812 1832231 .. 1832268 - -15.7  -4.82901   TTCGCCTCATAAAAA   GCCACTTACCCCTTCCC TTCA AGGAAGCAGTAAGTGGC    TTTTTTACATAGCTA 100 75
        mtlA 1828366 .. 1828384 -  -3.1   -2.9155   TGCCTTAATAGTACA             CCATGAG ACCAG CTAATGG             AAAACTTTATCTGAC  44 77
HMPREF9243_1808 NONE
HMPREF9243_1807 NONE
HMPREF9243_1806 1824508 .. 1824531 - -11.8  -5.01732   AAGTTGTCCAAAAAA          GAGGTCAGAA TTTT TCCTGACCTC           TTTTTCTTTGAAGTT 100 51
        proS 1820713 .. 1820728 - -10.4   -5.4833   TGAGTTAATAAAAAA              GAGGGC CTCT GCCCTC               TTTTTCGCGCTTGTC 100 169
        glgP 1818112 .. 1818124 -  -4.8  -5.82036   ACAATAAATAAAAAA                GTGC AGCAA GCAC                AAAAGGATCACTGAG  91 120
         eda 1815507 .. 1815549 -   -18  -5.04597   ATTTAGACATAAAAA TAACCCCCAAAAGTTGAATT CTT AGTCCAACTTTTGGGGGTCA CTACAAAAAGCTGGG 100 60
HMPREF9243_1796 1813803 .. 1813840 - -16.5  -4.70887   TGATCAATAAAGAAA   TAAGCCTGATCTTACCC CAGG GGGTGAAATCAGGCTTA    CTTGCTGCCAATTTT 100 261
HMPREF9243_1794 NONE
HMPREF9243_1793 1810964 .. 1810979 -    -4  -2.57013   CTTTAATTCAAGTCA              TAAGGA GTTT TCCCTA               ACGTCCCAGCGTGAG  45 23
        raiA 1810252 .. 1810272 - -11.9  -5.08824   TTTCCATTCAAAAAA            GCTGGATCA GAG TGACCCAGC            TTTTGACTTAAAAAT 100 44
        secA 1807445 .. 1807480 - -11.4  -3.32963   AGCTCCATTTCAGAA    GTTTAC-GCAAATCCTC TTT GAGGATTTACTGCAAAC    TTCTTCCAATGGACT  85 189
HMPREF9243_1789 NONE
HMPREF9243_1788 1803128 .. 1803163 -  -6.2  -5.00027   ATCAAAAAGACAAAA    GCAGCCAATTCCTTTC ACTT AAAAGTCATTGACTGC     TCTAGTTTGTTCTTT  80 103
HMPREF9243_1787 1801988 .. 1802013 -  -5.4  -3.67413   GCCAGCAATAAAAAG         GGCTACCTCT AGTTAA AGGAGTAGCC          TCTTTTTACTAATCG  60 44
        pstC NONE
        pstA NONE
        pstB 1799366 .. 1799391 -  -6.1  -5.42259   CTATTTCTAAAAAAA         GAGGACCTGGC CTTA ACCAAGTCCTG          AAGGTTTCTTTTCAA  89 60
HMPREF9243_1782 NONE
HMPREF9243_1781 1797516 .. 1797533 -  -2.7  -2.52464   TTTCTTTCTAATCTA             TCCAATA AGAA TATTGGT              CTTCGCATAGCGAAT  41 5
HMPREF9243_1780 1796766 .. 1796793 - -15.8  -5.15167   TATTATCAATAAAAA        CAAAAAACAGGC CGCG GCCTGTTTTTTG         CTTATTATAAACGTT 100 30
HMPREF9243_1777 NONE
HMPREF9243_1776 1787721 .. 1787765 -  -9.6  -5.80364   AGGCCAAGAAAAAAA CTCCCCCTAAAGTTTTAGCTTG TTT CAAGTTA--ACTTTAGAGGGAG AGTCTTACCGTAGTA 100 90
HMPREF9243_1775 1786574 .. 1786613 -    -8  -3.53012   GCGTTTTTCCTCAAA  TGTTCCCCAAGAAGGC ATTTTCTA GGCTTCTTGGAAAACA   ATATCCACTAATTCT  69 7
HMPREF9243_1774 NONE
HMPREF9243_1773 1784548 .. 1784591 - -13.4  -4.34486   ATTAACAACAAATAA CCGACCTCT-TGACTTAGA GGCTTAT TCTAAGTCTTAGAGGTCGG TTTTCGTTACTATTC 100 53
HMPREF9243_1770 1782396 .. 1782420 -  -8.5  -3.21747   CCATCCGACCATTAA          CCCTAACGGCA TCA TACCGCTTGGG          CCTGATTTAGATTGG  67 144
HMPREF9243_1768 1780037 .. 1780067 -  -9.9  -5.57396   ATAAGCAAGAAAAAA       GTTCAAGCTGA TTGCTATTC TCAGCTTGAAC       TTTTTCTTTTTACTC 100 51
HMPREF9243_1764 NONE
HMPREF9243_1763 NONE
HMPREF9243_1762 1774782 .. 1774830 - -14.9  -4.07535   AATCTTGATAAATAA CAAAAGAGTTGACTGCAATGCTC CGT AAGCATTCCAATCAACTCTTTTT ATTAATTATTCTTCT 100 31
        argF 1772098 .. 1772131 -  -8.3  -2.71681   TAATCTTTTCAACTA     GGCTAGTGATG AGTTGTGGGAAA CATCACTAGCC      TCTTTCAAATGATTA  65 160
        agcS 1770483 .. 1770496 -  -3.9  -3.12856   AAGTAAGAGAAAGTA               TAGTT TCTT AACTA                AATTTAACGATACAC  48 42
HMPREF9243_1757 NONE
HMPREF9243_1756 NONE
HMPREF9243_1755 1765416 .. 1765446 -  -3.3  -2.53213   TAATCTTCCAACTCA       GTAGCTGCCTTTA CGACT TAAAGGGCACTAC       CAATATTCCGTAAGA  43 12
        arcC 1764340 .. 1764372 - -14.9  -4.86133   TATAGATACTAAAAA      GCCCTCCTGGCTC AACAAAA GAGCTAGGAGGGC      TTAGTTATTGTTTTT 100 40
HMPREF9243_1751 NONE
        cobU NONE
        cobS 1758708 .. 1758718 -  -3.2  -2.87608   AAAGATCCATCAAAT                 CCCT CCT AAGG                 CCAGTAAGCCTAAAA  44 9
HMPREF9243_1748 NONE
HMPREF9243_1747 NONE
        cobD NONE
HMPREF9243_1745 NONE
HMPREF9243_1744 1753537 .. 1753572 -  -9.3  -5.80817   CCTAACAGAAAAAAA    CGATTATTAAACAAA TCAGGG TTTGCTCAATAATCG     TTTTTGAATCTTTTA 100 218
HMPREF9243_1743 NONE
        cobB 1751425 .. 1751465 -  -4.8  -3.21416   TAGTGGTATCAGTAA TCAAGTGGCCTCCAG-AGCG AAT CACTTCTTG-GACCACCTGA GCGCCTTGGCGGTCA  53 215
        cobH NONE
        cbiD NONE
        cbiE NONE
        cbiT NONE
        cobM 1747622 .. 1747643 -  -5.9   -2.5294   CAGTCGCCATAATAG           CAATCACCA GGTC TGCTGATTG            AAAAGCTTCCTGGAG  54 255
        cobJ NONE
        cobK NONE
        cobA NONE
        cbiK NONE
        cobI NONE
        cobQ NONE
HMPREF9243_1728 NONE
HMPREF9243_1727 NONE
        hemC NONE
HMPREF9243_1725 1738247 .. 1738285 - -14.1  -4.74453   TAACATATTGAAAAA  CAGCCTAGCTTAAGCGGA AAGT TTC-CTTAAGCTAGGCTG   TTTTTATATCTTATA 100 29
HMPREF9243_1723 1735749 .. 1735784 -  -5.5  -5.26119   TGGCTAAAAAGAAAA    TCGACC-CCGATAGCT ATGGA AACTATGGGAGGCCGA    TTATCATTAGATTAA  86 73
HMPREF9243_1722 1734623 .. 1734667 - -12.6   -4.9445   ATAAGCAATTAAAAA GTGCTAGTATCAGCCTCTTAAA AGA CTTAAGAG--TGATACTAGCAC TTTTATTTTATTGGA 100 53
HMPREF9243_1716 1728608 .. 1728637 - -15.9  -5.52986   ACTTGACTAAAAAAA       GTGTGACCAAGCT AATC AACTTGGTCACAC        TTTTTTCATTTATAA 100 41
HMPREF9243_1713 1726376 .. 1726403 - -17.8  -5.10208   CAACTGGAAGAAAAA        GGAGCCTGAGAC AAAA GTCCCAGGCTCC         TTTTTAAAATACGAA 100 201
HMPREF9243_1710 1722686 .. 1722713 -  -7.1  -5.26875   CTTCTAAGCAAAAAA        GCGAG-TCTTGG TGGTG CCAAAAGCTCGC        TTGTAATCATGTATC  95 106
HMPREF9243_1709 NONE
HMPREF9243_1708 NONE
HMPREF9243_1707 NONE
HMPREF9243_1706 NONE
HMPREF9243_1705 NONE
HMPREF9243_1704 1714881 .. 1714893 -  -3.5  -3.45118   CTATCTTAGAATGAA                TATTT GAA AAATA                TATGAATATTTTCTC  48 42
        htrA 1713484 .. 1713502 - -10.3  -5.37171   AAGAGCAAAGAAAAA             GCCTCAG TTTTC CTGAGGC             TTAATTAAGTATCAA 100 61
        rlmH 1712609 .. 1712662 -   -12  -4.80882   ATTTTATAGTAAAAA CCAAGCCACTAGGCCCTG-G-ATAAG TTTA CTTATCCACAGAGCCTAGTGGCTTTT TTGACTTTTGTTGCA 100 46
HMPREF9243_1700 NONE
HMPREF9243_1699 1709708 .. 1709731 -  -6.7  -5.09521   TTAAGAAAGCAAAAA          CACTTGTCC GAAAAG GGGCAAGTG           TTTTTTTACTAGTCT  86 34
HMPREF9243_1696 NONE
HMPREF9243_1695 1705690 .. 1705714 - -14.4  -6.06723   GTTTTCAAAAAAAAA          GCGTGACCAA AAAAA TTGGTCACGC          TTTTTTAATATCAAA 100 82
HMPREF9243_1693 1703029 .. 1703056 -    -7  -5.45802   TTGGCAAAATAAAAA        GAGCCCCTACCC AAGA AAGTAGAGACTC         CATTATTAATAAGCT 100 357
HMPREF9243_1691 NONE
        mgtA 1699968 .. 1699990 - -11.3   -5.5604   TTAAGCAATAAAAAA           GTCCCTGCC AATTA GACAGGGAC           GATTGTTACCGTGGT 100 261
        tyrS 1698566 .. 1698583 -  -3.5  -2.69202   TAAATCAGTATAGCA             TAAA-GCG GGT CGCCTTTA             GAACGGATAGTTTAT  43 76
        metG 1696489 .. 1696513 - -10.1  -4.19258   AGATTTCATGGAAAA          GAGACTGTG GTCTAGT CACAGTCTC          TTCCTCTTCATTAGC  86 36
HMPREF9243_1686 NONE
        rnmV NONE
        ksgA 1693963 .. 1693988 -  -3.1  -5.63517   CGGTTAAATAAAAAA         GAGGCCGGAAC AAAT GTCCTAGCCAC          TTATTAAAACACGAA  84 180
        natA NONE
HMPREF9243_1682 NONE
HMPREF9243_1681 1691648 .. 1691662 -  -4.2  -3.42124   TAAAAGGATTTATAA               GGACGA TTT TCTTCC               CAAAAGACCAGCTAA  53 76
HMPREF9243_1680 1691233 .. 1691282 - -21.8  -3.98484   AAGGCAAGGGATAAA GAAAAGAGGTGTAAGTAGCATG GTTTTG CATGCTGCTTACACCTCTTCTC AATCACTAATTACGC 100 47
        ispE 1690228 .. 1690247 -   -15  -2.93708   GTGTTTTAAAAAGAG            CCTGGGGC TTTT GCCCCAGG             TGATCCCCAATAAAA 100 51
HMPREF9243_1678 1688810 .. 1688820 -  -2.6  -3.06133   TAACCTCCTATCTAA                 TTAA TGG TTAA                 TTTTAAATGCTCGAG  43 11
HMPREF9243_1677 NONE
HMPREF9243_1676 1687281 .. 1687303 -  -7.7  -4.48263   TATATAATAGGAAAA           CGCCCATCA CTAAC CAATGGGCG           TTTTATTATTGGAGT  82 61
        purR 1686277 .. 1686327 -  -5.7  -5.85244   AAGTAAAATAAAAAA GGGACAAGACTTTCTAATTGTTTT AAAT AAAACT-TTAGAAAGCTTTGTCCT AACAGTACATTGCTA  91 51
HMPREF9243_1674 NONE
HMPREF9243_1673 NONE
HMPREF9243_1672 NONE
HMPREF9243_1671 1680583 .. 1680616 -   -12  -5.19879   TGGTAAATATAAAAA     TGTCTGCTTATTTC CCAATT AAAATAAGCAGACA      TTCCGATTAAGTTAT 100 47
HMPREF9243_1665 1675927 .. 1675957 -  -4.1   -5.5112   TCTATTAACAAAAAA      CCTAAAGT-CATGC CTTA GCATAAACCCTAGG       TTATCAATCAACATC  81 45
HMPREF9243_1664 1674128 .. 1674142 -  -5.8  -3.31461   GACTGATTCTTACAA               TAACTT TAA AAGTTA               ATTGCCATTAAGGAA  59 23
HMPREF9243_1663 NONE
HMPREF9243_1662 NONE
HMPREF9243_1661 1671247 .. 1671292 - -10.2  -2.86185   AAATTGAATCAATCA TATCGAGTGGCTACTTAGAAAA TTAC TTTCCTAAGTA-CCACT-GATA CATTCTAGCATAAAG  75 2
HMPREF9243_1660 NONE
HMPREF9243_1659 1669919 .. 1669952 - -14.8   -4.5774   GATTAATAACTAAAA     TAACCGCGACCAAGA AATGA TCT-GGTCGCGGTTA     TTATTATAAGAAGGG 100 84
         map NONE
HMPREF9243_1652 NONE
        coaD NONE
        guaC 1660670 .. 1660692 -  -9.1  -5.20534   ATCAAGCAATAAAAA           GGGCCGAAG TTTTT CTCCAGCCC           TCAATTTCAATATCG 100 43
HMPREF9243_1649 NONE
HMPREF9243_1648 1658687 .. 1658712 -  -6.2   -5.7946   TGTTTAATAAAAAAA         GTCTCCCAAC TTGATG GTTAAGAGAC          TTGATGATTTATGCT  93 40
        mutX NONE
HMPREF9243_1646 NONE
HMPREF9243_1645 NONE
HMPREF9243_1644 1655745 .. 1655765 -  -2.5  -3.17319   CCCAATTGATTAAGA            GCTAGGACT GTA AATCCTCAC            TATCAATATCTTCAT  45 6
HMPREF9243_1643 NONE
HMPREF9243_1642 1655017 .. 1655044 -  -9.8  -5.04356   TTAAACAAGCAAAAA        CGGAGTTGCCCA CAAT CAGGCTACTCCG         TTTTTCTATTATTTA 100 67
HMPREF9243_1639 1651558 .. 1651580 -  -4.8  -4.41633   CAGGCCCAAAAAGAA           TACACCAAGC CTA ACCAGGTGTA           TTTTATCCAGGGCCG  68 121
HMPREF9243_1637 NONE
HMPREF9243_1636 1648468 .. 1648521 - -22.1   -4.5852   TAAGTCAAAGGAAAA GTGCTTCAGGCTAGTC-GATCTTCCC TAT AGGAAAATCAGACTAGTCTGAAGCAC TTTTTATTCTCTATC 100 67
HMPREF9243_1632 1644702 .. 1644731 -  -8.5  -4.99134   ATGCCAAAGTAAAAA       GGCTCCTGCTCAA TCAC TCGAGGGGGAGCC        TTTTTATCGCTTTAA  95 59
HMPREF9243_1630 1642839 .. 1642866 -    -7   -4.8066   AACAGAAGGCAAAAA        GGAGGCTAGAAC CTTA ATTCCAGTCTCC         TTTTTGCTTGGCATT  83 63
HMPREF9243_1628 1639808 .. 1639837 -    -5  -5.67063   TCGATTAGAAAAAAA       GACGGCAAATCC ATTAAA GAATTTGTCGCC        TTTTTTATGGGAAGG  88 126
HMPREF9243_1627 1637950 .. 1637994 - -18.7  -5.50774   GAGAATAAATAAAAA CAGGGGCAGTTCCCTGTCTCT TAA AGAGTCAAGGAACTACTCCTG TTGAATGAAGTGTTT 100 53
HMPREF9243_1626 1636092 .. 1636118 -  -9.5  -5.59879   CAGAAAGACAAAAAA        GACGCC-CTACT TGAA AGTAGTGGCGCC         TGTTAAAATCAGCCA 100 49
HMPREF9243_1622 NONE
HMPREF9243_1621 NONE
HMPREF9243_1620 NONE
HMPREF9243_1619 1629549 .. 1629574 -  -9.7  -5.25803   AATTTCCACAAAAAA         GCTGCAGAAGC CTTT GCCTCTGCAGT          TTTTTCATGTTTAGC 100 42
HMPREF9243_1618 1627850 .. 1627870 -  -8.9  -5.00884   ATTTCCGCTAAAAAA            GGGACTGTC TGA GGCAGCCCC            TTTTAAAATATAAAC 100 127
HMPREF9243_1613 1623633 .. 1623653 - -11.9   -5.4833   TCAGTCAATAAAAAA            GACGTCCTC TCA AAGGACGTC            TCAGAAAAATAATTA 100 79
HMPREF9243_1612 1622160 .. 1622173 -  -2.3  -3.01712   TCTCCTTTTTTAATA               CAAGC TGAG GCATG                TCCGCTTCACGTCAT  42 44
HMPREF9243_1611 1621387 .. 1621415 -  -3.2  -3.09834   TATTTGATGATGCAA        TGGTTAAAACTT TTACT AAGCCTTAACCC        ATCGCATGAGTCATG  45 19
HMPREF9243_1610 NONE
HMPREF9243_1609 1619026 .. 1619071 -  -3.3    -5.093   CTTAAAATAATAAAA GTACCTCAGAAGTCGCTTC TTATAACG GAAAAGGCTTCCGAGGTAG CTATTTTATTAGACC  73 94
HMPREF9243_1608 1617969 .. 1617990 - -12.3  -5.37043   ACTTCATACAAAAAA           CGCAAGCCC AAGT GGACTTGCG            TTTTTCTTTTGCTTT 100 47
        thrC NONE
       coaBC 1614260 .. 1614274 -  -3.5  -5.84381   TGACCAAGAAAAAAA               GGACC TAGCT GATCC               AGCCATTAAATTGGC  88 61
        pdhA NONE
HMPREF9243_1602 NONE
HMPREF9243_1601 NONE
        lpdA 1607935 .. 1607955 - -13.3   -5.5604   GTAAGCAACAAAAAA            GAGCTGGCC AAA GGCCAACTC            ACTATATATAAAGTC 100 95
HMPREF9243_1597 1605757 .. 1605778 - -10.9  -5.94713   AGCGCATAAAAAAAA           GACCGCATG TTAG CATGCAGTC            TTCTCTATCAAGTTT 100 47
        glnQ 1604795 .. 1604807 -  -3.3  -2.57132   CCCTCCTTTTATAAG                CCTTC AAG GGAGG                AGATAAAGTCCCGCG  43 6
        glnH NONE
HMPREF9243_1594 NONE
HMPREF9243_1593 1602483 .. 1602497 -  -6.4  -3.53811   GGTACTGCCTTTAAA               CTCCTC CCT GAGGAA               GCCCAATTAGCTTTA  60 157
HMPREF9243_1591 NONE
HMPREF9243_1590 1600391 .. 1600424 -  -8.3  -4.08767   CTCATCTGTCTAAAA     TCCTAGTTTTTTATC AGTT GGGAAAAAACTAGGA      TTTATCCGTTCGACT  79 90
        typA 1598395 .. 1598416 -  -5.1  -5.52079   AGACCAAAAGAAAAA           GGCCAAGAC AAAA GTCTCAACC            TTTATTCGACTAGTC  88 58
HMPREF9243_1588 NONE
HMPREF9243_1587 1596961 .. 1596977 -  -2.3  -2.72379   TTAATGCTTGAATTA              GCTTT GCCTATG AAAGC              GGTTATAATAGCCTC  40 57
         pyc 1593456 .. 1593469 -  -2.4  -2.55351   GTTGTGTATATGAAT               TGGT CATGGC ACCA                GGCTCCTTTCTTTGA  40 54
HMPREF9243_1585 1593124 .. 1593144 -    -9   -5.3671   AAGACAATTAAAAAA            CGCAGCAG GTTTT CTGCTACG            TTAACTTATTTATTT 100 35
HMPREF9243_1584 1591475 .. 1591496 -  -6.5  -5.53436   ATAGAATACAAAAAA           CCTTGGCTC CGAA GCACCAAGG            TTAAGTAGAGGGAGA  93 108
HMPREF9243_1583 1590111 .. 1590136 - -14.1  -4.83246   CTATAAACAAAGAAA         GACCTTGGTAC TAAA GCACCAAGGTC          CGCTAGAGGGAGAGT 100 107
HMPREF9243_1582 1589417 .. 1589442 -  -8.4  -5.28481   CAGTTAACGAAAAAA         GCTGACTTCA ATTTCA TGAAATCAGC          TTGAATGCCCTATGC 100 35
HMPREF9243_1581 NONE
HMPREF9243_1580 1586132 .. 1586146 -  -3.6  -3.58269   TAACTGATTTTCAAA               TTCTTG GAT CAAAAA               CTTCTCCTCCCCTAG  52 165
        uvrB 1582600 .. 1582631 - -12.4  -3.41222   TCTGAAGCGCAAAGA      GCTCCCCATTGC AGATTGTA GCAATGGGGAAC       TTTTCTTTTGTAGTT  89 90
        rpsO 1581132 .. 1581153 - -10.9   -5.0538   TTTTACTTTAAAAAA           GCGAGACTC CAAA GAATCTCGC            TTTTTGTGGGCTTGG 100 57
         pnp 1578824 .. 1578848 - -11.5  -5.15117   CAAAATTCTAAAAAA          GAGAGCTGACT AAG AGCCAACTCTC          TCAATAAAAATCTAA 100 68
         asd 1577535 .. 1577563 -  -3.3  -4.18676   TTATAAAGGAAAGAA        GCATCTTTA TAACCTATTGG TAAAGATGC        TTACTTCATCTTTTA  59 47
HMPREF9243_1571 NONE
HMPREF9243_1570 1575005 .. 1575024 - -13.6  -3.88577   CTAATAAGCAAAAGA            GCTGGAGC CAGT GCTCCAGC             TTCCTTGGGCTGTAT 100 62
HMPREF9243_1569 1573366 .. 1573376 -  -3.2  -4.29227   CGAAGCACTAAGAAA                 TCCC CCA GAGA                 GTAAACTGGTTTTTA  59 96
        rpoZ 1571606 .. 1571621 -  -6.8  -5.58074   TAAGCACGAAAAAAA              GACCGG CTAA CCGATC               TTTGTTCGTGGTTAT  93 43
        priA NONE
         fmt NONE
         sun NONE
HMPREF9243_1560 NONE
HMPREF9243_1559 NONE
        rsgA NONE
         rpe NONE
HMPREF9243_1556 1561301 .. 1561341 - -10.6  -5.68489   GATAATAATAAAAAA  CACATTAGCGGTAGAATG ATTAA CACTCTATGGCTAATGTG  ATTTTCTATCGTTAG 100 338
HMPREF9243_1555 NONE
HMPREF9243_1554 1559083 .. 1559101 -  -7.4  -4.74013   TCTAAATATAGAAAA             CAGACTGC AAG ACAGCCTG             TTTCTTAACTATTCA  83 34
HMPREF9243_1553 NONE
        recG NONE
        plsX NONE
HMPREF9243_1550 1554450 .. 1554475 -  -4.1  -2.99871   TGGTAGAGGAAATTA         GATACTGTT AACTCTAA AACAGCATC          CCCTAAAAATTCAAT  47 196
         smc 1550131 .. 1550143 -  -7.7  -4.80959   CAAGTCAGAATAAAA                GCGAA GCA TTCGC                TTGTTTCTGACTTGT  88 237
HMPREF9243_1547 NONE
        ftsY 1547989 .. 1548011 -  -9.8  -5.01732   AAGGCGTCCAAAAAA           GGCTGGGACA CAT TTCCCCAGCC           TCTTTGCTTTTAAAC 100 35
HMPREF9243_1545 NONE
         ffh NONE
HMPREF9243_1543 1544629 .. 1544647 -  -8.8  -5.52384   TTTCCACTAAAAAAA             GCCCCGCT AAA AGCGAAGC             TTGTTAATAGGAGTT 100 149
HMPREF9243_1542 NONE
HMPREF9243_1541 1540999 .. 1541018 -  -6.4  -4.71061   ATTGATATTTAAAAA            GCTGGG TATCTTCT CCCAGC             TTTCACATGCGATGT  78 71
HMPREF9243_1540 1539905 .. 1539930 -  -8.3  -2.80016   TTTGAGCAGCAATCA         GGGCGTCAACT ACCG AATTGACGTCC          CCCCCGCCAAGTAAT  66 341
HMPREF9243_1537 1538641 .. 1538651 -  -3.2  -3.61356   ATGACGCATTCTAAA                 GGCT TAC AACC                 CCTTAGGGCGATCAA  50 18
        rpsP NONE
HMPREF9243_1535 1537907 .. 1537923 -  -9.5  -5.84381   TGACTAAGAAAAAAA              CTAGGAT ATA ATCCTAG              TTTAACTGATAATCT 100 58
        rimM NONE
        trmD NONE
        rplS 1536069 .. 1536085 -  -8.7  -5.69379   AGACAATTAAAAAAA              CTGTGCC TAA GACACAG              TTTTAAATACTTTAT 100 37
HMPREF9243_1531 1535551 .. 1535568 -  -9.9  -5.22039   TTTAAAGGTAAAAAA             GAGAGTG ATCT CACTCTC              CCTATTAACTAAAAT 100 30
HMPREF9243_1530 1534808 .. 1534829 - -10.2  -5.24531   ATTTTTCATAAAAAA           GACTGGGA TTTTTG TCCCAGTC            CGTAATAGCTTTTTC 100 77
HMPREF9243_1529 1533751 .. 1533781 - -10.5  -4.76312   TAGAAGATCTAAAAA       GACCCCCAAGTAA TCGAC TTACTTGGAGGGC       TTCTTTGTGTCCTTT 100 52
HMPREF9243_1528 NONE
HMPREF9243_1527 NONE
HMPREF9243_1526 NONE
HMPREF9243_1525 1528779 .. 1528812 - -11.7  -5.28176   CCTACCTATAAAAAA     TGAGAAGGCTGCGAC TTCT GTCCCAGCCCTCTCC      TGCTATCTCGGTCCA 100 61
HMPREF9243_1524 1526091 .. 1526116 -  -8.3  -5.47159   TGCCAAGACAAAAAA         GAGCTGTGCTA TCAA CATCACAGCTC          CTTACCTTTAATTAT 100 33
        clpB 1523264 .. 1523289 - -16.9  -4.63932   TAGTCGTTAATAAAA         GGGGCTGCGAC TCTG GTCACAGCCCC          TTACATACTTCCTTA 100 62
HMPREF9243_1522 1522487 .. 1522529 -   -18  -5.04597   ATTTAGACATAAAAA TAACCCCCAAAAGTTGAATT CTT AGTCCAACTTTTGGGGGTCA CTACAATGCTGGAGT 100 4
HMPREF9243_1521 NONE
HMPREF9243_1520 1520992 .. 1521039 -    -3  -3.93136   ACATTTACTCAGAAA TTTAAACTTGTCAAGAGG AAGAGCGTAGCG GCTCTTGATAAGTTTAAA GTTTATGTGTAATCA  52 41
HMPREF9243_1519 NONE
        yajC NONE
HMPREF9243_1517 1519596 .. 1519615 -  -4.2  -5.49568   AAGCCAAAATAAAAA            GGCTGAGC TCTC ACCCAACC             TGTTTAAGCATCACA  84 36
        dinB NONE
HMPREF9243_1515 NONE
HMPREF9243_1514 1515966 .. 1515991 -  -7.6  -5.07567   CTATATCTGAAAAAA         GAGGTTGCAA TTAATC TTGCAGCCTC          TTTTAAAATATTCAT  93 94
HMPREF9243_1512 1512776 .. 1512793 - -11.3  -5.19212   ATGATGACTAAAAAA             TGCGCTC GCTG GAGCGCA              TTTTTTTAACGGTTG 100 31
HMPREF9243_1509 1510825 .. 1510837 -  -5.5  -4.49556   TGGTCATTAAAGAAA                TCCCC CAA GGAGA                AAATCAACTAGAACT  72 197
HMPREF9243_1507 1505885 .. 1505895 -    -4  -2.84619   CAATAATTTATCATA                 GATT TTT AATC                 ATACCTTAAAAGTCT  46 85
        rpmG 1505646 .. 1505671 -  -7.6  -5.47218   CTTTAGTTAAAAAAA         GAGGCAGCGA TCTCTT TCACTACCTC          TTTTCAACCCGTTTA 100 49
HMPREF9243_1505 NONE
HMPREF9243_1504 NONE
HMPREF9243_1503 NONE
HMPREF9243_1502 1502613 .. 1502643 - -11.2  -5.05712   AGAAATAAGTAAAAA       GCCCTAGCTTCC TGATTAG GGAAGATAGGGC       GCTAAGTGCACGGTG 100 240
        valS 1499840 .. 1499865 - -14.1   -4.4388   ACATAAATTAAGAAA         GAGTCTGAGAC TTTT GTCCCAGACTC          TTTTCAAAATACGAA 100 70
HMPREF9243_1500 1499382 .. 1499401 -    -5  -4.56597   GTTTCCTCCTAAAAA            TACCCATC ACTT AATGGGCA             CACTGATATTAACTA  71 42
        glmS 1497494 .. 1497518 -  -6.5  -5.36364   TTAAAAACACAAAAA          GATCAGAATCC TTA AAATCCTGATC          TTCTTTTTTATAAGC  91 60
HMPREF9243_1494 1493395 .. 1493406 -  -2.2  -4.85599   CCCAGTTGACAAAAA                GCCT AGCT AGAC                 AAAAATAAAAGCCAA  64 121
        polA 1490125 .. 1490140 -  -4.8  -2.86689   AAAATGCCAGCAAAG              CTAATT TTTA AATTAG               GTTTTACTCCCTTTA  50 104
        coaE NONE
        nrdR 1487431 .. 1487455 -  -3.6  -3.84451   CTTTTCAAAGCTAAA          GCGGTCTAAT AAGCG ATTAAAACGC          ACTTCCCCCACATGG  56 426
HMPREF9243_1486 NONE
HMPREF9243_1485 1485255 .. 1485280 - -16.3  -5.60993   CCTCCTATAAAAAAA         TCCCTTCTGAG CATG CTCAGAAGGGA          CGATTACTAATTCAT 100 276
        thrS 1483205 .. 1483260 -    -3  -5.31456   TTAACTGATAAAAAA CGTGC-CAG-C-TTTAAGCTAATTGGTC ACTA GATCA-TTAGCTTAAAAGGCTAAGCACG TTGTCAAGTTAACTA  74 38
HMPREF9243_1482 NONE
HMPREF9243_1481 NONE
HMPREF9243_1480 1480894 .. 1480921 -  -9.2  -4.96848   TTCGGCATAGAAAAA        CGGCGAATATAA AACA CTATACCCGCCG         TACTTGCACAATAGT 100 171
        infC NONE
        rplT 1479649 .. 1479664 -  -6.1  -5.24799   TTATAAACATAAAAA              GGACC GCTGTG GGTCC               TTTTTTAACACTTAT  83 37
HMPREF9243_1475 NONE
HMPREF9243_1474 NONE
HMPREF9243_1473 1476220 .. 1476263 -  -9.8  -5.79595   GCTCAAAATAAAAAA GCTTCCATCCACA-GATATTT CTA AAGTCTCATGTGGATAGAAGC TTTTAATGCTTAGTA 100 63
HMPREF9243_1472 1475582 .. 1475627 - -25.3  -2.71144   CAGGTCGCTCAATTA TTCCAATAAAAAAATCCAGCT CATC AGCTGGATTTTTTTATTGGAA TAATTTTCTCGTAGG 100 3
HMPREF9243_1467 1471880 .. 1471901 - -12.3  -4.96848   TTTTCCATATAAAAA           GCGATCCGC AAAA ACGGATCGC            TTTTTTTATAGCAAT 100 31
HMPREF9243_1464 NONE
HMPREF9243_1463 NONE
        mgtE 1466800 .. 1466833 - -11.9    -5.626   CATTCCATAAAAAAA     GTCCCTACAGCATGA ATAC TCATACTATAAGGAC      GCTTCACCGTGTTAC 100 297
        metA 1465762 .. 1465783 -  -4.5  -3.10597   CCTTCTATTTAAAAC           TCGGTTTTA AAAT TAAAAGCGA            TGTCTTTTTAGAAGC  50 86
HMPREF9243_1459 1465151 .. 1465177 - -10.2  -5.03747   AAATCTTTGAAAAAA         GGGAAGTTCGAC GTG ACCAAACTTCCC         ACAACTATTTTTTAT 100 159
HMPREF9243_1457 NONE
HMPREF9243_1456 NONE
        ntpK NONE
HMPREF9243_1454 NONE
HMPREF9243_1453 NONE
HMPREF9243_1452 NONE
HMPREF9243_1451 NONE
HMPREF9243_1450 NONE
HMPREF9243_1449 1456432 .. 1456444 -  -3.3  -5.31519   ATATCCAAATAAAAA                GCCCT GCT AGGTC                TAATTGGACCAAAAG  76 58
HMPREF9243_1448 NONE
HMPREF9243_1447 1453862 .. 1453885 -  -8.9  -5.40072   CTTTCTTTAAAAAAA          GAGCCGGAA ACAAAG TTCCAGCTC           TGAGTCAAGTCTATT 100 36
        prfC 1452041 .. 1452080 -  -5.9  -5.26907   TAACAGAAAATAAAA  CCCCTTTCCACCAAA TTTCAGTGTT TTTGGTGAAAAAGGA   TCATTAACAAACTAA  89 130
        guaB 1450183 .. 1450216 - -20.5  -4.21319   AGCAACTGGAACAAA     CGATATGCGATAGGC GCAA GCCTATCGCACATCG      TTCGTAGTTGGGTTC 100 236
        ptsH NONE
        ptsP NONE
HMPREF9243_1440 1442568 .. 1442578 -    -4  -3.64438   CATTTTAACAAAAAG                 TCAT GAA ATGA                 AAAGGAAAAATTATT  52 36
HMPREF9243_1439 1442263 .. 1442281 - -10.3  -4.99035   CCAGCTACAGAAAAA             GCCTGGA CAATC TCCAGGC             TGTTTGTTAGTCAAA 100 41
        murE NONE
HMPREF9243_1437 1439349 .. 1439359 -  -3.2  -3.54029   TGGCAGGAACTATAA                 CACG CTG CATG                 CTTTAGTCCTCCTTC  50 28
        thrB 1438416 .. 1438448 -  -8.6  -4.46493   TTAAATAGAGGAAAA      CACGACTTCTAA AACTAGCGG CTAGAAGTCGTG      TTTAAGCATATTATT  90 36
        yqeG NONE
        yqeH NONE
HMPREF9243_1433 NONE
        nadD NONE
HMPREF9243_1431 NONE
HMPREF9243_1430 NONE
HMPREF9243_1429 NONE
HMPREF9243_1428 1432653 .. 1432667 -  -2.8  -3.26262   ACAAGAAAAATTATA               CCGATT TTC AATCGC               TTTGTCAATGTTATT  45 85
HMPREF9243_1427 NONE
        rpmF 1431809 .. 1431834 -  -8.3  -5.80951   AGTGAAAATAAAAAA         GAGATCAGGAC TTAT GTCCCAACCTC          TTACAGCAGAATCAT 100 40
HMPREF9243_1425 1431169 .. 1431207 - -16.9  -5.63504   AAGGGCAGAAAAAAA   GCCCAACCTAGAAAGGA AAATG CCCTTTCTAGGCTGAGC   TATTTGCTCTAGTAT 100 54
        mraW NONE
        ftsL NONE
HMPREF9243_1420 NONE
        mraY NONE
        murD NONE
        murG NONE
HMPREF9243_1416 1422144 .. 1422154 -  -2.6   -2.6175   TATATCGCAATTAAT                 TTTA ACA TAAA                 TCCTATTAAGACGAA  41 165
        ftsA NONE
        ftsZ NONE
HMPREF9243_1413 1418678 .. 1418688 -  -2.6  -4.65078   ACATTTTGAATAAAA                 TTAA TCA TTAA                 CATTCCTACCTTTTT  62 43
HMPREF9243_1412 NONE
HMPREF9243_1411 NONE
HMPREF9243_1410 1416649 .. 1416672 -   -11  -6.11229   ATTAAAATAAAAAAA          CACACCGCCC AAAG GGACGATGTG           TGCTCGTGGTACCAC 100 287
        ileS NONE
HMPREF9243_1407 1413581 .. 1413615 -  -5.8  -5.74122   GATTAGACAAAAAAA     CTACCCCAATCAAGCT AGT AATCTGATTGGAATAG     CTTATTCATTTATTG  91 35
        noxE 1411920 .. 1411962 -   -18  -5.04597   ATTTAGACATAAAAA TAACCCCCAAAAGTTGAATT CTT AGTCCAACTTTTGGGGGTCA CTACATTTTAATCAG 100 74
HMPREF9243_1405 NONE
HMPREF9243_1404 1410425 .. 1410472 -    -3  -3.93136   ACATTTACTCAGAAA TTTAAACTTGTCAAGAGG AAGAGCGTAGCG GCTCTTGATAAGTTTAAA GTTTATGTGTAATCA  52 41
HMPREF9243_1402 NONE
HMPREF9243_1401 NONE
        mtnN 1408071 .. 1408082 -  -4.4  -2.66964   GTACTCACTACACCA                TTCG TGGG CGAA                 CTATTGACGAGCTTG  47 146
        rpsD 1407301 .. 1407325 - -12.3  -4.84311   CGCTATACAATAAAA          GTCTGTTACAA AAA CTGTAACAGAC          TTTTCTAAAAGCGGA 100 41
        ezrA 1405354 .. 1405391 -    -5  -4.90477   GATAAAAAAGCAAAA   GTGCATCAAATCAATAG CTATC CAATTGATT-GAAGCAC   TTTCCTTGTTTAGAG  76 67
HMPREF9243_1397 NONE
        thiI 1402827 .. 1402851 -  -8.5   -4.7339   AATAAACGCTAAAAA          GCTTGCCTCTC TTC GATTGGCAAGC          TTTTTATATTGTTCT  95 73
         gnd NONE
HMPREF9243_1393 1400168 .. 1400220 - -14.3  -2.82862   AGTAAGCATTCAAAC TAAAACACCCCCTAGCTGCTAGC GCATTAA GCGAACAGTTAGGGGGTGTTTTG ATGTCTTTATTATGC 100 40
        pgsA NONE
HMPREF9243_1388 1394243 .. 1394254 -  -4.4  -4.07912   AAGCAAGCAAAAACA                GAAC AAAT GTTC                 TTAGTCCTTTTCTTG  61 26
        recA 1393023 .. 1393041 -  -2.4  -5.63517   TTTCTAAAGAAAAAA             CTTGGC TAAGAAC ACCAAG             TTTTTGGAAAAATAT  80 42
HMPREF9243_1386 1391086 .. 1391128 -  -6.3  -5.38951   AAGTCACATAAAAAA TAAGCGAACCGACCTTTCC AATAG GGATTTATCGATTCGCTTA TTATTTCATTCTGGA  89 99
HMPREF9243_1385 NONE
HMPREF9243_1384 1390620 .. 1390644 -  -8.6  -5.24416   CAAGCATAATAAAAA          GCCCAAGCTC TAATT GAACTTGGAC          TATAGCTGTCTCAAG 100 50
        mutS NONE
        mutL NONE
        msrB NONE
        ruvA NONE
        ruvB 1380784 .. 1380800 -  -7.2  -3.34398   TTTTCGCCGTAAAGA              CGGGCC GGTAA GACCCG              AGTATTATTTAAGAC  65 189
HMPREF9243_1374 NONE
        pfkA NONE
         pyk 1373546 .. 1373568 - -10.6  -5.93252   GGGAAAAATAAAAAA           GCCAGTACCT AAT AGGCACTGAC           TTCGTCTCGTTCAGG 100 42
HMPREF9243_1371 NONE
        xerD 1371629 .. 1371654 - -19.1  -4.10164   TCACCACTACAGAAA         GAGCCTGGGAC TTTT GTCCCAGGCTC          TTTTGACTTTTGTCA 100 48
HMPREF9243_1368 1369767 .. 1369781 -  -7.2  -2.60615   ACCTCTCTTAAAGAT               TCTATG GTT CATAGA               CTATCACAAACGCCC  60 113
HMPREF9243_1367 1369258 .. 1369284 - -11.6  -4.24432   AAATGCAAAAGCAAA         TCTAGCGGCCCC TCA AAAGCCGCTAGA         TCGATGTGTAATTCA  91 78
HMPREF9243_1365 NONE
        scpB NONE
        rluB 1367070 .. 1367101 -  -8.2  -5.79595   CTTGAAAATAAAAAA      TTCCTTTCACCGAA AGTC TTCAATGAAAAGAA       TTAATTAGTAAGTAT 100 216
HMPREF9243_1361 1366317 .. 1366364 -  -5.1  -5.14985   CGAAACATATAAAAA CACCAGCTTAAGAAGTTAAGCAA GTAT TAGCTT--CTCATTAAGCTGGTG TCTTTTTTATTTCAA  79 80
HMPREF9243_1358 NONE
HMPREF9243_1357 NONE
HMPREF9243_1356 1361012 .. 1361039 -    -7  -3.13164   TCCTCAATTACTCAA        CCTTCGCGCCTA TTGG TAGACCCGAAGA         ACCGTACCCGGTGCG  63 7
         cmk 1360220 .. 1360239 -  -4.3  -2.63712   AATAAAAGTACTAAC            CATCGAC ACTTTG GTCAATG             AATACCCTTCGATTA  47 102
        rpsA 1358824 .. 1358849 - -11.1  -5.33405   CGGATTAAACAAAAA         TAGGGCCGGGA TAAC TCCCAGCCCTG          TTTAATCTTTACTAA 100 37
         der 1357378 .. 1357399 -  -6.7  -2.52464   CTTCTCGTGAATGGA           GAATTATCA TCAA TGACAATTC            TCTATAAATATACCA  57 86
         hup 1357012 .. 1357039 -   -15   -5.4182   AAGTATAAATAAAAA        CTGCCAAGTCCT TCTG AGAACTTGGCAG         TTTCAAGTTAAGGAA 100 43
HMPREF9243_1351 NONE
        dapB 1354717 .. 1354729 -  -4.1  -4.20918   GCCAATCCCAATAAA                GCATC ACG GATAC                AGCCTCCGACAAAGT  61 113
HMPREF9243_1347 NONE
HMPREF9243_1346 1350481 .. 1350491 -  -3.2  -4.15222   ATCTTGGTTAATAAA                 GGAA ACT TCCC                 ATACCAATTGATCAT  57 235
HMPREF9243_1344 NONE
HMPREF9243_1343 1348460 .. 1348482 -  -6.2  -5.38054   TTGCATAAACAAAAA           CCGCAGCTAA TGA TTGCCTGCGG           TTTTCTTATGCTAGG  89 54
HMPREF9243_1340 NONE
HMPREF9243_1339 NONE
         pgi 1344331 .. 1344355 -  -9.4  -5.85425   GAAATAAATAAAAAA          GAGAAGCTTC TTGAT GAAACTTCTC          TTCTAAAAGCCTGAT 100 97
        rrsD 1342317 .. 1342337 -  -4.7  -3.53563   ACAGGCCCGGTTAAA            TCCATCAAC CAT GTGGATAGA            CCTCTCAAAACTAAA  57 80
HMPREF9243_1337 NONE
HMPREF9243_1336 1342109 .. 1342128 -  -8.6  -3.04652   TTTTCAAAGAACAAT            CTGCAACG TTTC CGTTGCAA             TGGAGGATAGCGGGA  70 24
        rr1D 1339049 .. 1339065 -  -9.5  -2.71708   TAAACCTCATACAAC              CTTATCC TTT GGATAAG              TCCTCGACCGATTAG  72 22
        rrfD 1338863 .. 1338873 -  -5.4  -3.79687   ATTCTCCATAAAATA                 TTGC ACG GCAA                 CGTCCTAGTCTCACA  60 17
HMPREF9243_1333 NONE
HMPREF9243_1332 NONE
HMPREF9243_1331 NONE
HMPREF9243_1330 NONE
HMPREF9243_1329 NONE
HMPREF9243_1328 NONE
HMPREF9243_1327 NONE
HMPREF9243_1326 1338170 .. 1338184 -  -4.2  -4.12942   CCAAAGTCGGGAAAA               CAGGAT TCG AACCTG               CGACCCCTTGGTCCC  61 1
HMPREF9243_1325 NONE
HMPREF9243_1324 NONE
HMPREF9243_1323 1337907 .. 1337920 -  -3.1  -3.56569   CCATAATATAATTAA               CAAGA TGGA CCTTG                TAGGACTCGAACCTA  50 16
HMPREF9243_1322 1337814 .. 1337826 -  -3.3  -3.50326   AGTAAAGGAGGATAA                GGGAT TCG AACCC                TTGCGCGGTTTGACC  50 3
HMPREF9243_1321 1337696 .. 1337725 -  -4.3  -2.63631   TTAACCCCTACACCA       CCGGACCTATTCA ATTT TGAATAATTGCGG        AGGCAGGATTCGAAC  47 18
HMPREF9243_1320 NONE
HMPREF9243_1319 NONE
HMPREF9243_1318 NONE
HMPREF9243_1317 1337382 .. 1337394 -  -3.3  -3.45033   GATAACGGAGGATAA                GGGAT TCG AACCC                TTGCGTCAGTTTCCC  48 3
HMPREF9243_1316 1337272 .. 1337287 -  -3.3  -3.60296   TATCTCCAGTTTAAA              TTAGG ATAATA CCTAA               ATATGACCCGTACGG  50 26
HMPREF9243_1315 NONE
HMPREF9243_1314 NONE
HMPREF9243_1313 NONE
HMPREF9243_1312 1336882 .. 1336901 -  -8.6  -5.76237   TAGACAAATAAAAAA            GCAACCCT TTAT AGAGTTGC             TTAAATATGACCCGT 100 30
HMPREF9243_1311 NONE
        pfkB NONE
HMPREF9243_1309 1332948 .. 1332990 -   -18  -5.04597   ATTTAGACATAAAAA TAACCCCCAAAAGTTGAATT CTT AGTCCAACTTTTGGGGGTCA CTACAAACACAAGGA 100 51
HMPREF9243_1308 1331930 .. 1331949 -  -6.5  -3.73072   AATTTCTCGATTAAA            TAGATCC ATGTAA GGATCTA             AATAGAGTTTTCCAG  66 482
HMPREF9243_1304 1330128 .. 1330151 -  -6.8  -5.18357   GAAGCTATTAAAAAA          TGCCATACCA TTTC TGATATGACA           TTAATTATAAAAATT  86 79
        clpP 1327265 .. 1327293 - -11.2  -4.89393   CAAATTTTATAAAAA       CCGAGTGTA-CTT ACTT AAGCTACACTCGG        TAATCATTCTGTATA 100 63
HMPREF9243_1298 1326045 .. 1326070 -  -6.3  -4.27026   TCGGAAATAAAAATA         TTTTTAATGAG TTTC CTCATTTAAAA          CCTGATTACTTACCC  69 3
         gap 1324949 .. 1324973 - -11.4  -5.28778   ATCACTTAGAAAAAA          GGCAGGGAGC GTCTG ACTCCCCGCC          TTTACATGGATAGAC 100 65
         pgk NONE
        tpiA NONE
         eno 1321539 .. 1321567 - -10.4  -4.82667   CCATTAGAGTAAAAA        TAAAAAGGTGGG AGCGA CCCACCTTATTA        ATTAAAAACGTTTTT 100 57
HMPREF9243_1291 NONE
HMPREF9243_1290 NONE
        serC NONE
        pdxB NONE
        secG 1316662 .. 1316678 -  -9.4  -5.60993   TTTTCTATAAAAAAA              GCTGGG ATAAG CCCAGC              ACTTTCCTAAAACTA 100 38
         est NONE
         rnr NONE
        smpB 1312949 .. 1312985 -  -7.3  -3.15861   TACGACCTGTAGTAA    GTCTCAAAAGTTTGACA TCT CGTCTAACTTTTGGGGC    ACTCTTACAGGTCAT  63 89
HMPREF9243_1282 1310954 .. 1310969 -  -3.2  -4.74103   TGTCGAATCCAAAAA              CACCCC CAAA GGGATA               CTTTTCTAATATAAC  67 128
        ssrA 1310570 .. 1310587 - -10.5   -5.1615   GCAACATCTAAAAAA             GCGGCCG CTGA CGACCGC              TAATGCTTACTATTA 100 41
        pyrF NONE
        pyrE NONE
HMPREF9243_1277 1307497 .. 1307513 - -10.9  -6.20267   TGAAAAACAAAAAAA              GCTGTGA AAA TCACAGC              CTTTGTCTTAGCCAC 100 124
        lysA NONE
HMPREF9243_1274 1304037 .. 1304049 -  -7.7  -3.57144   TTCTTTATGCTCAAA                GCCTA GAG TAGGC                TTTGGCGAAGTTCAG  69 15
         ald 1302616 .. 1302641 - -19.1  -4.06903   AATGGCTAAACGAAA         GAGCCTGGGAC AAAA GTCCCAGGCTC          TTTTTAAAACACGAA 100 194
HMPREF9243_1270 NONE
HMPREF9243_1269 NONE
HMPREF9243_1268 1297140 .. 1297163 -  -8.9  -5.64274   TTACTCATAAAAAAA          CTGGCAGAT TCATTC ATCCGCCAG           TATCCACCTAATGCG 100 33
         tdk NONE
        prfA 1295261 .. 1295280 -  -8.6  -4.63993   AATTCCAAAAAAGAA            GAAGCCCA TTGC TGAGCTTC             TATAAATCGTAGCTG  90 42
        prmC 1294118 .. 1294135 -  -6.3  -4.56597   CGGTTGGGCCAAAAA             TTCCAAC CTTA GTCGGAA              CAATCAAGGTCAGGG  76 325
        glyA NONE
         upp NONE
        murA NONE
HMPREF9243_1260 1289827 .. 1289866 - -22.5  -5.30155   TGAGCAAGTAAAAAA  GGAGCAACTTCAGTGAA AGATTA TTCACTGAAGTTGCTCC   TTTTCTTTTAGTTTT 100 40
HMPREF9243_1256 1285669 .. 1285702 - -12.6  -3.94184   ATAGCTAATATTAAA     CCAGGAGAATAGAGC TTTTG GCTCT-TCCTCCTGG     TTTTCCTCATTTATT  95 97
HMPREF9243_1251 NONE
        coaA NONE
HMPREF9243_1249 1280151 .. 1280172 - -12.3  -4.77567   ATTTTCATAAGAAAA           GGCTGGGAT AAAA ACCCCAGCC            TCTTTCTTTTTATTT 100 35
HMPREF9243_1245 NONE
HMPREF9243_1244 NONE
HMPREF9243_1243 NONE
HMPREF9243_1242 1271962 .. 1271998 - -18.1  -3.79747   TCAGGCACCATTAAA    GGCCCGCACTAGCTC ATTGACA AAGCTAGCGCGGGCC    TTTTTGGACGACATC 100 44
HMPREF9243_1240 1269367 .. 1269405 - -16.2  -4.32607   GTAAAATGCAATAAA   CACAAAAGCGACAGGAAT TAG ACCCCTGTCGCTTTTGCA   TAAAATAGACTAAAT 100 90
         ung 1266862 .. 1266887 -  -4.7  -5.47821   AGCGACTGAAAAAAA         GGAGGACAGTA TCTC TACCATCCTCT          AATTTCTGAAGCAAG  88 254
HMPREF9243_1233 1263855 .. 1263890 - -19.2  -2.95161   AAACTCTAATAACGA    TAAAAGAGCCTGGGAC AAAA GTCCCAGGCTCTTTTT     TAAAACACGAACTAT 100 512
         tig 1259097 .. 1259131 -  -8.6    -5.252   TATTGTGACAAAAAA     CGAGTGTGAAGTCA ATTAATG CGACCTCCCACTCG     ATTTCTGACCTATTT 100 60
        clpX 1257755 .. 1257780 - -15.5  -3.92373   GACTGCATTGAGAAA         GAGGCTGTGAC TCTT GTCACAGCCCC          TCTTCAATTAATTCA 100 41
        ysxC 1256853 .. 1256872 -  -3.6  -2.66517   ACTGACCAATAATAT            CTAAAATG TCAA CATTTTGG             CGGACCTGATCAATA  45 176
        rpoD 1253781 .. 1253820 - -10.9  -4.42721   GAAGGATAGAATAAA  GGCATTCAAGCATTGGA AAGCGA TCCAACATTTGAATGCC   ATTACTGTTATCAGA  95 48
HMPREF9243_1224 1252096 .. 1252128 -  -4.4  -4.10179   CATAAGTTAGACAAA      TAAAAAAGACTAAA GAATG CCTAATCTTTTTTA      TCAAAGTATTAGTAA  61 192
HMPREF9243_1223 1251228 .. 1251257 -  -4.9  -5.08255   ATCCGTAAAATAAAA       GAGAGGCCAGGGT AAAA AACGTCGCCTCTC        TTCTAAATAAAAATA  79 99
        mreD 1249304 .. 1249332 - -14.7  -5.55001   TAATAAAAAATAAAA        CGCCCTCTTCGTT TAA AACGAAAAGGACG        CTTTCGTGGTTCCAC 100 301
HMPREF9243_1219 NONE
HMPREF9243_1218 1246887 .. 1246905 - -10.3  -5.14563   TTTTCCACTAAAAAA             GCCTCCT ATACA AGGAGGC             TCGACGAAAAGACTA 100 195
        carA 1245462 .. 1245476 -  -2.1  -3.66921   AATTCCAATGTTAAA               GGTTC CATAT AAACC               TTATCGGCTACTTCA  49 255
        pyrB NONE
        pyrC 1240169 .. 1240180 -  -3.6  -2.57266   ACCATAACCAAAACT                CCCA CTAG CGGG                 CATTAAGGGGTTAGA  45 72
        rplU NONE
HMPREF9243_1207 NONE
        rpmA 1238097 .. 1238120 -  -6.6   -5.9218   TATATAATAAAAAAA          GGGCTGTGAC AACT GTCTCAGCCT           CTTAAGTCGTCTGCT  93 40
HMPREF9243_1205 1236966 .. 1237008 - -10.9  -5.19251   GAAGATTAACAAAAA GCTCAGTCT--CTTTTACTGC GAC GTAGTAAAAGATAGACTGAGC TTTTTTATATATTAT 100 37
HMPREF9243_1200 1231349 .. 1231360 -  -2.2  -3.21924   CCATTGTCTATAAGA                GACT AGTT AGCC                 AATTATTATTGATAG  43 93
HMPREF9243_1199 1230339 .. 1230363 -  -3.6  -5.75478   AATTATATAAAAAAA         GAGCC-GAG ATTATAGA CTCAGGCTC          TCTGTTTATTATTCT  85 34
HMPREF9243_1198 1230036 .. 1230052 - -10.1  -5.59655   GAAAGTAATAAAAAA              GCGGTCC TTA GAACCGC              TCATTCATTTACTTC 100 75
HMPREF9243_1197 1229189 .. 1229210 - -15.9  -5.36441   TTTCTATACAAAAAA           GGCGAGGAG AAAT CTCCTCGCC            TTCCCTAGACTAAGG 100 223
        glgC NONE
        glgD NONE
        glgA 1223273 .. 1223304 -  -3.8  -5.27206   CATAGATAAGAAAAA      GGCC-AATTCGAG TGAACAG CTTGAATTTGGCC      TTTTTGTTTTGTATT  78 51
HMPREF9243_1190 1222086 .. 1222103 -    -2   -2.8085   TTAAGGTAGCTAAAC             CATTGCC CAAGC GGCA-TG             ATACTAAATCGCCAT  41 239
HMPREF9243_1185 1216689 .. 1216707 -  -4.5  -3.20494   AGGTAACCACTAAGA             GTTCGGA TAACT TCCGACC             ACTTTTCACTTGATT  51 181
HMPREF9243_1183 1212929 .. 1212940 -  -2.2  -3.78953   AGTTTTACCACTAAA                CTAC ACCC GCAG                 AACAAACATGCTCTT  49 98
HMPREF9243_1182 1212831 .. 1212850 - -10.8  -5.48623   AAATACAAATAAAAA            GTGAGACA AGCC TGTCTCAC             TTTAATAGTCAATAT 100 39
        rnhA NONE
        lspA 1211705 .. 1211728 -  -3.3  -2.83715   CTGATCACCATGATA          TTCATAGCTT TTCTT AAGC-ATGAA          ATCACTCCTCTTTTG  44 27
HMPREF9243_1179 NONE
HMPREF9243_1178 1210436 .. 1210458 - -10.6  -4.00842   AGCATAAAACAAATA           GAGGCTGGAA TTC CTCCAACCTC           CTTATTATTATTTTT  89 33
HMPREF9243_1177 1209674 .. 1209699 - -13.4  -4.11216   TCCGTATTTTGAAAA         GAGTCTGGGA CTTTTT TCCCAGACTC          GGTAGGCTTACTTAT 100 37
HMPREF9243_1176 1207995 .. 1208020 - -14.1  -4.11216   TTCGTATTTTGAAAA         GAGTCTGAGAC TTTT GTCCCAGACTC          ACTTTCCTAAAAGTA 100 61
        thiW NONE
         hpt 1206240 .. 1206256 -  -5.1  -5.70522   AATAATAAGAAAAAA              CTGGG ACGAAAG CCCAG              TTTCTCTTATAAGTA  88 52
HMPREF9243_1172 NONE
        azlD 1204942 .. 1204975 -  -3.9  -3.08173   AGCAACTGGAGCGAA     CTATGGTAGATAGTT GCAA AACTATCGCACATAG      TTCGTGAAGTGGACG  47 133
HMPREF9243_1169 1202651 .. 1202693 -   -18  -5.04597   ATTTAGACATAAAAA TAACCCCCAAAAGTTGAATT CTT AGTCCAACTTTTGGGGGTCA CTACAAAGTTTGGGG 100 81
HMPREF9243_1168 1201634 .. 1201653 -  -6.5  -3.73072   AATTTCTCGATTAAA            TAGATCC ATGTAA GGATCTA             AATAGAGTTTTCCAG  66 481
        fabG 1199066 .. 1199093 - -15.8  -3.08977   CTGTAAAAAACATGA        TTAAAGGAACGG TTAA CCGTTCCTTTAA         TTTTTATGCAGCGAG 100 46
HMPREF9243_1162 NONE
HMPREF9243_1161 NONE
HMPREF9243_1160 1194722 .. 1194744 - -12.8  -5.42164   TACAAATAACAAAAA           CTCCTAGGAA AAG TCCCTAGGAG           TTATATTTTAAGCTA 100 51
HMPREF9243_1159 NONE
HMPREF9243_1158 1193219 .. 1193238 -  -6.5  -3.73072   AATTTCTCGATTAAA            TAGATCC ATGTAA GGATCTA             AATAGAGTTTTCCAG  66 481
HMPREF9243_1156 NONE
HMPREF9243_1155 NONE
HMPREF9243_1154 1187782 .. 1187804 -  -6.4  -2.74461   CACGTAGTGTGAAAT           CAATATATGT TAA ACACATACTG           GGCTATTATATATCA  57 80
        rpsB NONE
         tsf 1185823 .. 1185841 -  -8.8  -5.06816   ACCTTCTAATAAAAA             GGCTGGGC TTA ACCCAACC             TATTAGTATTTTCCA 100 61
        pyrH NONE
         frr 1184441 .. 1184490 -  -8.2  -5.62288   TTAATAAAAGAAAAA GTGACTTAATATTCACCTCTTTA AAATA TAAAGAAG-GAATAAAAAGTCAC TAATTCAAGCAATAA 100 48
        uppS 1183329 .. 1183340 -  -5.8  -3.28637   GACCAACATCATCAA                CTGG GTAA CCAG                 CCCCTCAAAAGAAAA  58 203
        rseP 1181408 .. 1181427 -  -8.6  -4.64861   TCCCTTCAAAATAAA            GAAACCCT CAAA AGGGCTTC             TCTTTTTATTTAAAA  90 35
        polC 1177013 .. 1177038 -  -9.8  -4.92791   TACAATATAATAAAA         CAAGGCTGTC GAAAAT AACAGCCTTG          TTAAGTATTACGCCT 100 59
HMPREF9243_1144 1176518 .. 1176529 -  -2.2  -4.47217   AACTATCAATTAAAA                CATC CATA GACG                 CTCTCCTTTCTTTCA  58 45
HMPREF9243_1143 NONE
HMPREF9243_1142 1174294 .. 1174315 - -14.5   -4.7497   TCTACTCATGAAAAA           GAGTGAGCG CTAG CGCTCACTC            CTTCCTTTCCTATAC 100 82
HMPREF9243_1141 NONE
        nusA NONE
HMPREF9243_1139 NONE
HMPREF9243_1138 1171835 .. 1171845 -  -2.6  -2.74334   TGAAACACAATCAAT                 TAAA TTT TTTA                 GCAAAGCCTTGGTTA  41 10
        rbfA 1168649 .. 1168660 -  -5.8  -2.83449   ACATTTTGATAAGTA                GAGC ATGC GCTC                 TGGTTGATAAGATAT  55 485
HMPREF9243_1134 NONE
HMPREF9243_1133 NONE
HMPREF9243_1132 1163894 .. 1163947 -  -4.8  -5.96894   ATGCAAAGAAAAAAA GACTAGAAGTGCTAC--AACTTGTCT CTTT AACCAAGTGAAGTCGCACTTCTAGTC CTTGTTGTTTTACTA  95 86
        recQ 1161706 .. 1161721 -    -9  -3.61715   TAGCTTTTTGAATAA              GCTGTC CATC GACAGC               TTCTTTCACAGGCGT  75 319
        ribF 1160074 .. 1160094 -  -3.3  -6.14618   GACAAAATAAAAAAA            GTTGGCA AAATTGA TACCAAC            TTTTAGAGAATTTAA 100 37
        hrcA NONE
        grpE NONE
        dnaK 1156179 .. 1156208 - -12.9  -3.31905   ATCCTCGATACAATA       GTTTGTCCCTGCC TTAA GACAGGGACAAGC        CTACTATAGTCGATT  93 39
        dnaJ 1154885 .. 1154927 -   -18  -5.04597   ATTTAGACATAAAAA TAACCCCCAAAAGTTGAATT CTT AGTCCAACTTTTGGGGGTCA CTACAAAAGGGTCAC 100 88
HMPREF9243_1124 NONE
HMPREF9243_1123 1153390 .. 1153437 -    -3  -3.93136   ACATTTACTCAGAAA TTTAAACTTGTCAAGAGG AAGAGCGTAGCG GCTCTTGATAAGTTTAAA GTTTATGTGTAATCA  52 41
        lepA 1151264 .. 1151279 -  -6.8   -5.0538   CTTCATGTGAAAAAA              GACCGC CTAA GCAGTC               TTTTTTCTTTAACTC  82 40
HMPREF9243_1120 NONE
HMPREF9243_1119 1150182 .. 1150198 -  -5.1  -4.41797   AAAATTACATCAAAA              GCTTCCT CAT AGTAAGC              TAATAAGGGAACCAA  68 489
         fhs NONE
HMPREF9243_1115 NONE
        thyA 1144504 .. 1144520 -  -3.7  -2.87564   GCATGGGCCCATATA              GCTATTA ACA TGATAGC              CTCCTTTTATCCATA  46 61
        folA NONE
HMPREF9243_1112 NONE
HMPREF9243_1111 NONE
HMPREF9243_1110 NONE
        lepB 1140914 .. 1140937 -  -7.4  -4.77165   TTCCTCATAAGAAAA          GGCAGCTACA TCTT TGAAACTGCC           TTCTCATCCATTCGA  83 49
        ylqF NONE
        rnhB 1139193 .. 1139229 -    -3  -3.65656   TCATCATACATATAA    CCACCCTTTCATAGCC TATTC AGCCGTAAAAGGATGA    CAATTTCATTAGAAA  50 34
        dprA NONE
        topA 1136077 .. 1136101 -  -3.7  -5.80951   AGTGAAAATAAAAAA         CCTG-TAATC TTATTT GATTATCAGG          TTTCGTATTCTGTCA  90 50
HMPREF9243_1104 NONE
        codY 1134185 .. 1134202 -  -6.9  -5.74288   ATAAACAATAAAAAA             TCGCGTC ATCT GGCGCGA              TTTTTTTGCTTTAAA 100 36
        parE NONE
        parC 1128804 .. 1128818 -  -2.2  -2.73875   TTTCTCTGAATAGTA               TAAATA AAA TATTCA               AAAGAATTATTTCAA  40 113
HMPREF9243_1100 1127776 .. 1127799 - -12.6  -5.28176   GCCAGTCACAAAAAA          TGCCACAATA TAAG TATTGTGGCA           TTTTTTATATATTCA 100 66
HMPREF9243_1099 NONE
HMPREF9243_1098 1123860 .. 1123878 -  -7.4  -5.14563   CCCCTTATTAAAAAA             GCTGAACT TTT AGCCCAGC             TTTCATTTACCTATA  90 214
HMPREF9243_1097 NONE
HMPREF9243_1096 NONE
HMPREF9243_1095 1120557 .. 1120592 -  -4.7  -4.73388   AACTCTCATTAAAAA    CAGCACAGCTAGTTG TTCATG CAACTGACCGTGCTC     TTTAAAAATGGATTA  74 46
HMPREF9243_1093 1117724 .. 1117739 -  -4.8  -3.32647   GCCCAATGATACCAA              TAACTT CCAT AAGTTA               ATACACCTTTCCCCG  55 50
HMPREF9243_1092 1116342 .. 1116365 - -10.4  -5.00895   CGCACCATAGAAAAA          GAACAGGACT TTCT AATCCTGTTC           TTTAATTGGGGGCTA 100 59
        folK 1114798 .. 1114842 -  -8.7   -4.3953   GTCAAGTACAATAAA TAGCGTTTATTAGCTTGCTTT TGC AATTCGGGCTAATAAACGCTA CTTCGAATATTTTAT  90 37
HMPREF9243_1085 1110325 .. 1110382 - -14.6     -4.13   ATATATAATTACAAA TATAGAGCAGAAAAAAGGACTTCATTT CAATC AAGTGAAGTCCTTCTTTC-GCTCTAAA AGCCTTCATTATGTT 100 21
HMPREF9243_1070 NONE
HMPREF9243_1069 1095573 .. 1095599 -  -5.9  -5.14965   ATGCCCACCAAAAAA         GAGTAAAGGCC TATTT AGCCTTTACTT         TTATTCTTCTCATAG  83 9
HMPREF9243_1067 1094382 .. 1094411 - -11.5  -5.36689   AAAGTAAAAATAAAA       CCATAGTTGCTGG GAAT CCAACAGCTATGG        CTCACAGAAGTGAAT 100 47
HMPREF9243_1066 1093648 .. 1093694 - -10.4  -5.62288   CGAATAAAAGAAAAA GCACTCCTCAAG-ATGACTTA GAAGGA TAAGTGATCCTTGAGGGGTGC TTTGCTATTTAATTA 100 34
HMPREF9243_1059 NONE
HMPREF9243_1058 1084324 .. 1084347 -  -6.7  -5.14965   AGTCTGACTAAAAAA          GAAGTTGGC AGGGTG GCCAGCTTC           TTTTTTATTAAGCAG  86 44
HMPREF9243_1057 1083431 .. 1083450 -  -2.2  -4.07687   ATTCCTTGCTTAAAA            CAAAAATT AATC AGTTTTTG             GGTATTAAATTCAAA  53 206
HMPREF9243_1056 1082934 .. 1082952 -  -2.4   -5.5112   GGCATGAAGAAAAAA             TATCGTAC CTG GTACAATG             ACTCTTGTCTTGAGG  81 113
        FbpA NONE
        lexA 1076264 .. 1076310 - -22.6  -3.80893   AGCTTATAATCCAAA TAAAACCGCTCTCTAAGTCAGT TAC ACGGACTTAGAGAGCGGTTTTT GCTTTAAAAAGTATG 100 29
HMPREF9243_1025 1055476 .. 1055533 - -14.4  -5.25772   AAAGCATAAGAAAAA CTCAGTCTCTTATCAGACTCTCTGCC AGTCAA GGTAGAAAAATTGATAAGAGACTGAG TTTTTTGGTTAATTC 100 67
HMPREF9243_1023 1054018 .. 1054045 - -11.4  -4.57353   TGGGATTATACAAAA        GAGGTTGCGA TGTATCGG TCGCAACCTC         TTTTCAATTTTTTTA  95 69
HMPREF9243_1010 1042743 .. 1042768 - -19.1  -5.00616   TTCGTGTTTAAAAAA         GAGCCTGGGAC TTTT GTCCCAGGCTC          TTTTTTCTGCCATTA 100 47
HMPREF9243_1003 NONE
        rnpB 1035567 .. 1035587 - -13.3  -4.91109   TCGCTATGATAAAAA            GGCTGGAAC CTT GTCCCAGCC            TCTTATGTTGCCTGA 100 45
HMPREF9243_1001 1033834 .. 1033876 -   -18  -5.04597   ATTTAGACATAAAAA TAACCCCCAAAAGTTGAATT CTT AGTCCAACTTTTGGGGGTCA CTACATATTATTATA 100 513
HMPREF9243_0999 NONE
HMPREF9243_0998 1032216 .. 1032251 -  -2.6  -4.56775   ATTTTTGCTGAAAAA    GACTCAACCTATTATGG TGA CCCCAATAAGTTG-GAC    TTTATATATAGTGAG  63 176
HMPREF9243_0960 NONE
HMPREF9243_0959  993014 ..  993033 -  -5.7  -5.08824   TTCCTATTGAAAAAA            CCTAGGC TTTCAC ACCTAGG             TTAAAAAATAATTCG  81 53
HMPREF9243_0958  992397 ..  992420 -  -9.6  -5.22794   ATAAGCAGTAAAAAA          GGCCTCAC TTCAAGGT GTGAGGCC           TTTTAATTACTGCTG 100 51
HMPREF9243_0952  985384 ..  985407 - -12.4    -5.055   TCAATCGCTAAAAAA          GAGCGTTGGG AAAA CCCAGCGCTC           TTTTAACTGCTTTGT 100 47
HMPREF9243_0948  979567 ..  979599 -  -5.7  -5.65927   GAGTTAAAGAAAAAA     CGAGGCTTGTGATT GTTTAA AATCATA-GCCTCG      TTTTTATTAGTCGCT  88 32
HMPREF9243_0947  977890 ..  977929 - -16.8  -3.61398   TTGCGCTTGGAATAA  GTATAAAAAAGGCAGGGCT CAA AACCCTGCCTTTTT-ATAC  TTAGAACTACTTAAA 100 41
HMPREF9243_0945  976522 ..  976537 -    -9   -5.0925   TTCCAAAATTAAAAA              CGCTGA TATA TCAGCG               TTTTGATCTTCATTA 100 61
HMPREF9243_0944  975437 ..  975454 -  -4.9  -4.58283   CAAGGTTTTGAAAAA             TCTGAAA GTCT TTCCAGA              GAAAATGCTGGCTAA  71 389
HMPREF9243_0931 NONE
HMPREF9243_0930 NONE
HMPREF9243_0929 NONE
HMPREF9243_0928  959109 ..  959148 - -10.3   -5.1101   TGATTAGCTAAAAAA  CACCTCTTCA-AATGG CTTGCCTTT CCATTTTGAAGAGGTG  TTTTGTTATATATTA 100 45
HMPREF9243_0927 NONE
HMPREF9243_0926  956814 ..  956838 -  -6.5  -4.07687   AGGGTTTTTGCAAAA          GGAATTCTCTA TAT TTGAAAATTCC          AGAAAATAAGCATCG  68 329
HMPREF9243_0923  954566 ..  954597 - -10.3  -5.19212   ATGACCATTAAAAAA      GCGGACTTTAC TTTTTTAACC GTAAAGTCCGC       TTTTAAGTTCATCAC 100 57
HMPREF9243_0918  950403 ..  950451 - -15.7  -3.46236   ATTAATAAAAGGCAA CAAAAAAAGTAGCTCAATCTAGA GAA TGTAGATTGAGCTACTTTTATTA CCGATGTAATTTTCT 100 39
HMPREF9243_0908  921351 ..  921365 -  -5.6   -2.7364   TATAATATCAAAGAC               GACCAG GGT CAGGTC               TGTTACCGAGTAGAT  50 519
HMPREF9243_0896  913108 ..  913125 -  -6.9  -3.08032   TTTTGTTCAAAAGTA             GCGTCCT GAAA AGGGCGC              TTTTTTATTTTTTAG  62 30
HMPREF9243_0895  912130 ..  912163 -    -4  -4.32048   TAATAATATTTAAAA    CCCCACTCAGACCAGC TAAG ACTG-T-TGAGTAGGG     CGATTTGCTGTATTA  61 38
HMPREF9243_0893  909098 ..  909123 -  -9.8  -4.90266   TTGACCAAGCAAAAA         GCAGAAGCAC ATCTCA ATGCTTCTGC          TTTTTCTTCCTCAGT 100 70
HMPREF9243_0892 NONE
HMPREF9243_0891  908305 ..  908323 - -10.4   -4.4595   TGACAAAAGTCAAAA             GAATTCAC ACA GTGAATTC             GTCGACTTTTCGTAA  95 126
HMPREF9243_0855 NONE
HMPREF9243_0854  872586 ..  872605 -  -3.6  -3.65224   AGTTCATGTGAATAA            CTTTAAAG ACAA CTTTTAAG             GAAAGAAATTATATG  54 317
HMPREF9243_0846  866559 ..  866581 -  -9.9  -5.92399   GAATAAAAGAAAAAA           GCTGGCAGA ATTGA TCTACCAGC           TTTTTAACTTGCTTG 100 64
HMPREF9243_0827 NONE
HMPREF9243_0826 NONE
HMPREF9243_0825 NONE
HMPREF9243_0824  847025 ..  847039 -  -2.2  -5.00616   TCCTTTTTTAAAAAA               TTAAAT TGA ATTCAA               TCGACAACTTATGAA  66 41
HMPREF9243_0823 NONE
HMPREF9243_0822  846252 ..  846262 -  -3.2  -3.53012   GGCTCCTCTCCTAAA                 TGGA TAT CCCA                 ATGGCACGCTGGATG  50 10
HMPREF9243_0821 NONE
HMPREF9243_0820 NONE
HMPREF9243_0819 NONE
HMPREF9243_0818  841754 ..  841789 - -17.2  -3.25317   GGATAAATTAATAGA    CATAAAAAAGAAGCCC CTAG AGGCTTCTTTTTTATG     CTTCAGACTGCATGC 100 21
HMPREF9243_0814  837435 ..  837454 -  -9.3  -5.15381   AATAGATGCAAAAAA            GCTGGGA ATTCCA TCCCAGC             TTTTAATATCAAGTA 100 361
HMPREF9243_0810  833766 ..  833778 -  -2.7  -4.59342   TCTATCATAAACAAA                TTCTC AGG GAAAA                GAAAGTTAAGCGATG  62 54
        mgsA  833190 ..  833231 - -11.1  -5.47846   AAGTAAAAAAGAAAA GGTCAACTCGGA-TTCTC TCTAATC GAGAAGTCTGAGTTGACC TTATTATTTTGCTCA 100 38
HMPREF9243_0793  816151 ..  816169 -  -3.1  -4.96762   CATACATGACAAAAA            GC-GCACC AGAC GATGCTGC             TAAGGCTGTCTGATG  70 82
HMPREF9243_0790  814720 ..  814730 -  -2.6  -2.72463   ACTTATGCTTAATTA                 TATT TTA AATA                 AAAATAAAAGCGTTT  41 19
HMPREF9243_0789  813655 ..  813682 - -13.6  -5.45813   GACTAAAAAAGAAAA        TCCGCCATTAAA AGCT TCTAATGGCGGA         TCGTTTTGTAATGAA 100 59
HMPREF9243_0788 NONE
HMPREF9243_0787  812909 ..  812935 -  -5.8   -5.4505   TTTTGCAATAAAAAA         GCCACCCCTAAA CAA CCTAGCAGTGGC         TAATTTTGTAATGAA  91 124
HMPREF9243_0786 NONE
HMPREF9243_0785  810946 ..  810972 -  -6.5  -4.81551   TATTGATATTAAAAA         GCCGCTACTGG TATTT CTAGTAGAGGC         TTTAATTTTAAATGA  80 33
         mvk NONE
        mvaD NONE
HMPREF9243_0781  805718 ..  805756 -  -2.5  -2.72043   AATTCTCCTTTAAAT   TTCAGATTGGAATGA TTAATGAGG CCATTCCAAGCTGGA   TAGTTTACCTGTGGT  41 43
         fni  804605 ..  804628 -  -5.2  -5.18357   TAAGCCAGCAAAAAA          TCCCCTTAGC ATTA GAAAAGGGGA           TTGAATCAATGGATA  79 45
        cysK NONE
HMPREF9243_0778  802657 ..  802680 -  -6.8  -5.18357   GAAGCTATTAAAAAA          TGCCATACCA TTTC TGATATGACA           TTAATTATAAAAATT  86 185
HMPREF9243_0776  800102 ..  800159 -  -5.1  -5.27923   GAAGTCTATAAAAAA GCATGGTTTAGC-TTAAACTCAATTTCT AAC AGGAATTGGGTTTAAAAGCAGACCATGC TTTTTTATTTATGAT  84 34
HMPREF9243_0758  768789 ..  768815 - -10.9  -5.28176   GTGAGCCATAAAAAA         GGCCGTGAC TTTCATATG GTCACGGCC         CGATGTCGGTATTTT 100 60
HMPREF9243_0757  767709 ..  767732 - -11.8  -5.28176   CGCACGCACAAAAAA          GTGACCCACT GATT AGTGAGTCAC           TCTTAATCATTTATT 100 56
HMPREF9243_0756 NONE
HMPREF9243_0755  766269 ..  766290 -  -8.1  -5.65513   CATGAAGTAAAAAAA           TCAGTGCTCA CAG TG-GCACTGA           TTTTTTTGATGACTA 100 58
HMPREF9243_0752  763075 ..  763091 -  -2.1  -3.30007   AATATTTGCTGACAA              CTGGGTC ACT GGTCCAG              TGCTGGTAGGCCTGG  45 194
HMPREF9243_0740  751614 ..  751634 -  -2.5  -3.45737   GAATGACCATGACAA            TATTGGCCA AGC CGACCATTA            GATTCGAATGAAAAC  46 231
HMPREF9243_0739  750381 ..  750439 - -11.2  -4.24285   CATATACTTAATAAA GCAGCCAGTGATTGAAAGC-TCCT-GTC TCTGT GACTAGGATGGCTTCAGTCCCTGGCTGC TTTTTACTAGTACTT  90 118
HMPREF9243_0737  747732 ..  747757 - -14.1  -3.96298   GATTTATCAAGCAAA         GGGACTGTGAA AAAA TCCACAGTCCC          TTTTTTGTCTAAGTT 100 49
HMPREF9243_0735  746117 ..  746130 -  -2.4  -4.65263   AGCTTTTAAAAGAAA               GTGA TTATTT TCAC                CAAGCTTACAGCCCT  61 45
HMPREF9243_0734  745281 ..  745308 -  -7.8  -5.13521   AAAGCATGCAAAAAA        GCAGCTC-TTCTA TTT TGGAAAGAGCTGC        TTTAATTTACTTAAA  93 45
HMPREF9243_0725  733561 ..  733587 - -15.2  -5.74288   ACAAACAATAAAAAA         GACCTCCGTCTA GTC TAGGCGGAGGTC         TTTTGAATAGATAAG 100 115
HMPREF9243_0724  732854 ..  732890 - -19.7  -3.36112   GGAAAAAATATTTAA    TAAGCAGCGATTCATCA TCG TGATGAGTCGCTGCTTA    TTTTTCGCTTGCCTT 100 23
HMPREF9243_0720 NONE
HMPREF9243_0705  714044 ..  714069 - -14.1  -4.11216   TTCGTATTTTGAAAA         GAGTCTGAGAC TTTT GTCCCAGACTC          TTTTTCCTTGTTGCT 100 47
HMPREF9243_0700  706706 ..  706734 -    -9  -5.54264   AAATATCTAAAAAAA        GCAGTTATGC TCACAAAAC GCATAACTGC        TTTTTTTAATAATTA 100 38
HMPREF9243_0695  701648 ..  701672 -  -2.9  -4.51363   TATCAAATACTAAAA          GGACTGT GAAAACGATGT ACAGTCC          TTTTTTAGTTGAGTG  60 30
HMPREF9243_0692  698247 ..  698259 -  -6.3  -3.92143   GAAAATGGCGACAAA                TTCTC TTT GAGAA                TTTTTACGTCTTTTT  65 87
HMPREF9243_0689  695952 ..  695962 -    -4  -3.13867   TTATTGACCAAGACA                 TTGA AGC TCAA                 ATTATTCATTTCTTA  48 357
HMPREF9243_0663  667961 ..  668000 -  -7.2   -5.5112   CCGACCAATAAAAAA  GCCGAATGGATCAGTG ATCCTTTA CACTGATTCATCCGGT   TTTATTTTTATAAAA 100 55
HMPREF9243_0656  660875 ..  660915 -  -6.2  -5.69262   TGATAAAAAGAAAAA CCAAGCGGGTAGT-CTC TTCACTTT GAGCACTTCCGGCTTGG  TTTTTCTTAAGCATG  91 46
HMPREF9243_0651 NONE
HMPREF9243_0650  656150 ..  656183 - -12.7  -4.43309   CAATGCTAATGAAAA     GAAGTCTAAGAACCT TCAA AGATTCTTAAACTTC      TTTTCTCCTACTATC 100 47
        prsA  654994 ..  655038 - -13.7   -3.5323   AATGTCAAATAAAAT GAAAAGAGCATGGCCCGAGGA GAT TCCTTGGAGCATGCTCTTTTA CTGATAGACTATTTT 100 34
         xpt  644472 ..  644497 - -11.9  -5.48063   AGTGAATACAAAAAA         GAGTCTGGGAC AAAA GTCTCAGACTC          TTTTCAAAATACGAT 100 190
HMPREF9243_0637 NONE
HMPREF9243_0636  637788 ..  637817 -  -7.3  -5.07011   TAGATAAACTAAAAA       TGAGCTTT-CCC AAGACCG GGGTAAAGCTCA       TTTTTTATTTGCTAG  85 37
HMPREF9243_0634  636175 ..  636217 - -11.6  -5.39721   GCATTAGACAAAAAA GAAGCAGAACAAG-ACTGA AAATAA TCAGTTCTTGTTCTGCTTT TTTGCATAGCTATAG 100 120
HMPREF9243_0622  615787 ..  615818 - -14.5  -5.27938   ATTTGTAAAGAAAAA      GGCAGGACTTCCT AAATAG AGGAGGTCCTGCC       TTTTTGCTATCTAAT 100 43
HMPREF9243_0620  613189 ..  613209 - -13.3   -5.5604   GTAAGCAACAAAAAA            GAGCTGGCC AAA GGCCAACTC            ACTATATATAAAGTC 100 82
HMPREF9243_0616 NONE
HMPREF9243_0615 NONE
HMPREF9243_0614 NONE
HMPREF9243_0613  607680 ..  607692 -  -5.5  -3.15249   TAGACTTTCCAGTAA                CAGCC GTT GACTG                AATCGAGTGGGGCGT  55 131
HMPREF9243_0612  606687 ..  606698 -  -3.6  -5.28942   GATTTTAAAGAAAAA                GCCC GTTA AGGC                 TTAATCTTTTTACAT  78 35
HMPREF9243_0611  605356 ..  605373 -  -3.3  -4.18018   GCGCGGGACTCAAAA             TCCCGTG TCCT CACGGAC              GTGTGGGTTCGACCC  60 150
        proC  597121 ..  597138 -  -9.9  -5.93252   TTGAAAAATAAAAAA             GGCTATC CTGG GATAGCC              CTTCTTGCTTCAAGT 100 89
HMPREF9243_0593  595279 ..  595324 -  -3.5  -5.26119   TTGGTAAAAAGAAAA CTCGAGCCTATCATTGTCAGGT CATTT ACC-GAC--TGATCAGCTCGAG TCTTTTTAACTATCT  76 31
HMPREF9243_0590  591012 ..  591036 -  -2.9  -5.67063   CGCATGATAAAAAAA         CGTCGACCAC TCCATG GTA-TCGACG          TTTTTTATCAAGACT  81 106
HMPREF9243_0584  584963 ..  584987 -  -6.5  -5.50925   AATGAAGATAAAAAA          TAGCTGAGA AGAGCTA TCCCAGCTA          TTTCATCACTTCTAT  93 37
        galE  583469 ..  583496 -  -9.8   -5.4833   TTAGCCAAGAAAAAA        GGAGCCTGGGAC AAAA GTCTCAGGCTCT         TTGTAAAATAGGAAC 100 354
HMPREF9243_0582  582283 ..  582296 -  -6.7  -4.09739   TGAATCTGTTCAAAA               CATGG TCTT CCATG                CTTTGAATGCTACAA  70 190
HMPREF9243_0580  580532 ..  580554 -  -4.3  -3.54543   AGCGATTTTCTCAAA          GCCTTATCAA ATGA TTGATAA-GC           AAAAGTGAGAAAATC  55 48
HMPREF9243_0573  573261 ..  573288 -    -7  -5.31545   AATAAGACTAAAAAA        GCAGACGTTC TCAAAACT GGACGTCTGC         TTTTTTTTGCCTTTT  95 39
HMPREF9243_0563  564195 ..  564214 -  -9.2  -2.87146   CACAACACGAGGAGA            GCGCCCCA TCGC TGGGGTGC             TCTTTTTTTACGTCA  73 48
HMPREF9243_0561  561974 ..  561989 -  -3.2  -3.17229   ACTTGACTACCAAGA              CGTTTC TGGT GACACG               GTCATTATTCCAATT  46 439
HMPREF9243_0557  556468 ..  556489 - -10.9  -5.09762   ATTGCAATAGAAAAA           GCTGAGCAC TTTT GTACTCAGC            TTTTTATGACTTAGG 100 52
         nth  555634 ..  555663 - -10.8  -4.30719   TGGTGGTACAAGAAA       GCGAGCAGA-CCA TTTTC TGGACCTGCTCGC       TTTTTAATTTATTAT  90 40
HMPREF9243_0553  551838 ..  551870 -  -4.2   -5.4833   TTAGCCAATAAAAAA     GGTGTTGAGGAGCAG AAGG CTT-TACTCAACACC      ATAAAGCATAGTTAT  84 54
HMPREF9243_0548  538501 ..  538512 -  -5.8   -4.1899   TTATTCTAGTTAAAA                CGCT TCTT AGCG                 TTTTTTGGTTCTCTG  69 227
        uvrC  480434 ..  480457 -  -8.2  -5.29846   AAGTGTAAAGAAAAA          CGGAGTAAGCC TCA AGCT-ACTCCG          TTTTTTGCTATTTAA 100 58
HMPREF9243_0478  474788 ..  474807 -  -2.8  -4.77036   CCCCAGTACCAAAAA            GCACTCCAT GAT ATGGTG-GC            TGATCCTAATTATTT  68 422
HMPREF9243_0474  468640 ..  468695 -  -2.1  -3.86981   GACGACAACGAATAA GAAAAAGCCTAAGTTGACCTTGAGC GCTTAAAT ACGCA-GGCCA-CTTAGGCTTTTTT CTATTGAAGGGATGA  51 26
HMPREF9243_0459  454424 ..  454451 - -12.1  -5.47159   CCCCAACATAAAAAA        CTGCCTCCTGTC TATTT GACAGG-GGCAG        TTTTTTGATTGTCGC 100 398
HMPREF9243_0450  446338 ..  446363 - -11.2   -5.1925   GCATAAGCTAAAAAA         GCCTTC-CCGC ATCAA GCGGGGAAGGC         TTTTTTTACTAGAGT 100 40
HMPREF9243_0448 NONE
HMPREF9243_0447  442718 ..  442745 -  -9.2  -5.30616   GTAGGCAAATAAAAA        GCGAAGCTAGTCC AAT GG-CTAGTTTCGC        TTTTTGTTTTATATT 100 101
HMPREF9243_0440  437576 ..  437611 -  -9.8  -5.06585   TAAAGCAGAGAAAAA    GTGCTCCTGGTAAGTT CAAA AATTTGCCAGAAGCAC     TTTTTGTATAGGATC 100 284
HMPREF9243_0417  420976 ..  420993 -  -6.9  -3.40867   GTATTTATTAACCAA             GCTGGGA GAAA TCCCGGC              TTTTTTATTGAATGA  65 44
        msrA  408666 ..  408693 - -10.7  -5.10154   ATGGAAAAGTAAAAA        CCAGCAGGA-GT TCACT ACATCCTGCTGG        TTTTATTTTGCGCTT 100 222
HMPREF9243_0369  368839 ..  368879 -  -9.7  -5.62045   ACAGAGAATAAAAAA  GCCCTGACTGCCACTTT AACTAGG AGAGTGGCGGTCAGGGT  TAACTTCTTCAGATT 100 44
HMPREF9243_0368 NONE
HMPREF9243_0367  367391 ..  367415 - -10.7  -4.83032   ATAGGAAATAGAAAA          GCCGACGCTCT TCG AGAACGTCGGT          TTTTTTGTTGGTTTA 100 55
HMPREF9243_0364 NONE
HMPREF9243_0363  363239 ..  363256 -  -5.7  -3.39328   AATTTCAAAAAAGTA             TATGTAA GCCC TTACATA              TGTTAGAATATCGTG  57 291
HMPREF9243_0357  358331 ..  358365 - -12.3  -3.36251   ATGATTAAATCAATA    CAGCCAGCTGA-CTTT TCTA AAGGCTCAGCTGGCTG     TCTATTTTTGGCTTT  89 39
HMPREF9243_0336  324079 ..  324099 - -13.3   -5.5604   GTAAGCAACAAAAAA            GAGCTGGCC AAA GGCCAACTC            ACTATATATAAAGTC 100 54
HMPREF9243_0333  321425 ..  321446 -  -6.7  -5.45652   ATCTTTAAGAAAAAA           GC-TTTGAAG TTT CTTCAAAAGC           AGAGTAAGAATGATC  91 510
HMPREF9243_0329  319907 ..  319940 -  -6.8  -5.07567   TTATATTTTAAAAAA     GTGTCGGTGAAGAGC CGGGT GCTCT-CATCAACAC     CAAATCTTATAGCTC  86 97
HMPREF9243_0322  309308 ..  309322 -  -4.2  -3.09516   TTTTTCATGAGCTAA               CCTCCT TCA AGGATG               GCATTGACTCTTTGG  50 7
HMPREF9243_0321 NONE
HMPREF9243_0320  307803 ..  307837 - -12.9  -4.81249   GCCTAAACTTAAAAA     CAAGCCCGGGAGC TTTTGATTG GCTCCTGGGCTTG     CTTTCTTTTCTGGGA 100 44
HMPREF9243_0316  302739 ..  302754 -  -2.6  -2.89881   TACTCACCTCATATA              CATTAT ATAT ATAACG               AATTACAAGAGAATC  42 122
HMPREF9243_0315  302459 ..  302482 - -11.8   -4.6902   TGACAAGCGCAAAAA          GGACTAGGAA ATTT CTCCTAGTCC           TTTTCTTGTAGCAAA  95 46
HMPREF9243_0312  299521 ..  299547 -  -2.2  -3.53091   ATGTGCTTGGTGAAA         GTTGGTGTGAAG TAG CTTAGCACAAAC         TAACCTCACTCAATA  47 52
HMPREF9243_0311  298660 ..  298700 - -14.8  -5.59655   CAAACCAACAAAAAA CCAGCGCCC-CCTAAGCTC ATTC AAGCTTTGGCAGGCGCTGG  TTTTAGGCTTTTATG 100 197
HMPREF9243_0304 NONE
HMPREF9243_0303  291748 ..  291789 - -13.7  -5.04249   CTGCTAAAAAATAAA CCAGCGAAGATCCTGAGAC TTTT GCCCCAGACTCTGCGCTGG  TTTTTATATTTTATT 100 36
HMPREF9243_0289 NONE
HMPREF9243_0288  277033 ..  277053 -  -6.1  -3.76373   CTTTTAATACTGAAA            CCCCCATAG TGG CTATGGTGA            CCCCAATAAGTTGGA  64 192
HMPREF9243_0273 NONE
HMPREF9243_0267 NONE
HMPREF9243_0266  261084 ..  261123 -  -3.2  -3.92996   GTCCATACAGAAGAA CCTTTCATTCTGATCAGG GCTGGG CCT-ATCA-AATGAAAAG  TTACACCCGGCTCTT  55 323
HMPREF9243_0237  235839 ..  235870 -  -8.8   -3.8125   CTTCCAATGAAAATA      GGCCTATGATGA AAGGAAAG TCGTCATAGGCC       TTTTAAGTCGATCTG  78 55
HMPREF9243_0221  220834 ..  220846 -  -2.6  -5.10461   CTTATTGAACAAAAA                CCGC GCTTT GCGA                CCACCATGGGTGGGC  73 291
HMPREF9243_0215  215150 ..  215167 -  -8.4  -3.81951   CGGTAGAGGAGGAAA             GCAGCC TGTAGG GGCTGC              TTTTTTTGAGTTAAT  74 36
HMPREF9243_0203  207865 ..  207901 -   -11  -5.06585   GAAACCACACAAAAA   CACCGTTCCA-CCGG CTTTTATT CCAGCTGGAACGGTG    TTTTTCTTATACTCT 100 32
HMPREF9243_0195 NONE
HMPREF9243_0194 NONE
HMPREF9243_0193 NONE
HMPREF9243_0192  196406 ..  196436 -  -8.3  -4.89562   CTAAAATCAATAAAA       TCGCCTCTGCT AGCTGATTG AGCAGGGGCGA       TTTACTTTAGTAATG  95 32
HMPREF9243_0179  185830 ..  185840 -    -4  -2.91182   AATCAAGAATACAAT                 TACA TAA TGTA                 TAAAGGAATTTATCA  46 434
HMPREF9243_0178  184593 ..  184619 -  -6.5  -5.54079   GTAAAAATTAAAAAA         TGGAGCATTCC GTAAA GGTCTGCTCCA         TTAATTTTTTCGTAA  93 99
HMPREF9243_0177  182420 ..  182432 -  -4.9  -5.68039   AAATTTATAAAAAAA                TATCT TAC AGATA                ATAAAAATGCTCAGA 100 428
HMPREF9243_0133  135825 ..  135864 -  -8.7  -4.32482   ATGTAGAATTTAAAA  GGCACAGCAGTCCGCT AGTCATTGA AG-GGATTGCTGTGCC  TTTTTGTGAGTTGAA  83 50
HMPREF9243_0128 NONE
HMPREF9243_0127  130376 ..  130415 -    -8  -4.59414   TGATAACAAGGAAAA  GACACAGAGAGCTGTT AAACAAAG AACAGTTTTCTGTGTC   TTTTTTTAGTTTTTA  84 57
HMPREF9243_0125  128941 ..  128986 -  -7.7  -4.56367   GACTTGATAAAGAAA GCCTTGAATCAGTGACTTCTCT GGA AAAGAAGA-ACTGGATCAAGGC TTTTTTATTGGCTGT  84 60
HMPREF9243_0124  127493 ..  127531 -  -3.2  -5.10163   AATTTTAAAATAAAA  CCAGGTCCCCAATAAGT CTCAAT ACTTAG-AGGGAGCTGG   TTTTCTGATGGAGAG  73 77
HMPREF9243_0121  124686 ..  124722 - -10.3  -4.86001   ACCAGTTTATAAAAA   CAGCTCCCTCTTAAGT GATAGT ACTTAGG-GGGAGCTG    TTTTTGTATGGTTAA 100 37
HMPREF9243_0117  119581 ..  119621 -  -7.6  -3.64822   AGGCGCTTATTTAAA CGGCCAAG-C-CCTGGACCT GAC AGGACCAAGTGACCTAGCCG AAGCTAGTTTAGACC  67 408
HMPREF9243_0109  111935 ..  111953 - -10.4  -3.89412   AGTTAAAGGACGAAA             GAATTCTC AAA GAGAATTC             GTCGACCTTTAGCGA  88 139
        guaD   92714 ..   92735 -  -5.8  -5.67967   AGGACTATAAAAAAA           GGCTCCGC TTAGAT ACGGAACC            TTTTTCATATTCTAA  91 85
HMPREF9243_0090 NONE
HMPREF9243_0089   91638 ..   91662 - -10.1  -5.65927   GATTTAAATAAAAAA          CGACTGTGA TTTGGGG TCACAGTCG          TAAAATTGATTATTT 100 35
HMPREF9243_0088 NONE
HMPREF9243_0087   90532 ..   90590 - -10.7  -2.53263   CTCAGGTGGAACTTA TTTATGTAGTGACCCCCAAAAGTTGAATT ATT AGTCCAACTTTTGGGAGTCACTACATC-- CACTGAGGGGCTTTT  75 54
HMPREF9243_0083   85781 ..   85791 -  -5.4  -3.31232   GGCTGCATAGAAAAT                 CCTT TCT AAGG                 CTGGTGGGGCTAGGG  57 43
HMPREF9243_0082 NONE
        femX   83233 ..   83253 - -13.3   -5.5604   GTAAGCAACAAAAAA            GAGCTGGCC AAA GGCCAACTC            ACTATATATAAAGTC 100 103
HMPREF9243_0077   77765 ..   77785 - -10.5  -4.63542   TACAACGGCGAAAAA            CCAGGTAAA CTT TCTACCTGG            CCAAAATACAACTAC  91 432
HMPREF9243_0075   74705 ..   74734 -  -7.9  -3.31144   GTCTTAGCGGGACAA       GACATCCAT-TCGG CAG CCGATATGGAAGCC       GTCGCTAAGACGATT  65 409
HMPREF9243_0065   67936 ..   67975 - -12.3   -5.4111   AATAAGCACAAAAAA  CTCCCTTAGTCCTTTCC AAATAG AGAAAGAACTGAGGGAG   TTTTTGTGTTATTTG 100 34
HMPREF9243_0062 NONE
HMPREF9243_0061 NONE
HMPREF9243_0060 NONE
        glmM   64019 ..   64041 - -11.3  -5.10077   AAAGACCCTAAAAAA           GGAGTCCCC TCATT GAGGACTCC           TTTTATGATGAAATC 100 43
HMPREF9243_0045   51217 ..   51237 - -13.3   -5.5604   GTAAGCAACAAAAAA            GAGCTGGCC AAA GGCCAACTC            ACTATATATAAAGTC 100 97
HMPREF9243_0039   46071 ..   46084 -  -5.9   -3.1247   ACCGGTGAGAGCCAA               GGCCC CGCT GGACC                GCAAACAAGTGGAGA  52 80
HMPREF9243_0037   44247 ..   44283 -    -6  -5.69379   ATACAAGCAAAAAAA   CTGAGC-GCTTTCCT GGAAAATA AGGAAAGGAGCTCAG    TTTTAATTTTCTACT  91 172
        argG   39809 ..   39829 - -14.1  -5.34555   GGAGACGACAAAAAA            CCGCATAGA CTT TCTATGCGG            TCGTGTTTTTTGGTC 100 274
        trpB   38474 ..   38504 - -12.6  -4.25104   TCCTCTTCACGAAAA       GTCGACGAATTCTC TAC GTGAATGCGTCGAC       TTTTCGCTCCAGCGA  95 76
HMPREF9243_0029   34263 ..   34282 -  -6.4  -5.08824   TTTCTATCTAAAAAA            GACCCTGCC TGT AGC-GGGTC            TAGAAAATTTGACTT  86 272
HMPREF9243_0015 NONE
HMPREF9243_0014 NONE
HMPREF9243_0013   16918 ..   16953 - -14.2  -5.24129   GTTTCCTATAAAAAA    CCGCTTGAGAA-GCTTT TTA AAGGCCTTCTCAAGCGG    TTGAAGTTAATATTA 100 38
HMPREF9243_0012   16318 ..   16337 -  -7.2  -5.58522   TAGAGAAAATAAAAA            GCACC-TAG TAA CTAAGGTGC            TTATTTCTTTCATAA 100 426
HMPREF9243_0003    3264 ..    3279 -  -2.5   -3.9392   TGGCATGCTAAATAA              GCCTC TGTATT GAGAC               TTTTAAAAATTTTAG   0 57
