locus-tag class description C3E78_00005 PF00308 Bacterial dnaA protein C3E78_00005 PF08299 Bacterial dnaA protein helix-turn-helix C3E78_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain C3E78_00010 PF02767 DNA polymerase III beta subunit, central domain C3E78_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain C3E78_00015 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C3E78_00015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C3E78_00020 PF02463 RecF/RecN/SMC N terminal domain C3E78_00025 PF05258 Dna[CI] antecedent, DciA C3E78_00035 PF00204 DNA gyrase B C3E78_00035 PF00986 DNA gyrase B subunit, carboxyl terminus C3E78_00035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_00035 PF01751 Toprim domain C3E78_00040 PF00521 DNA gyrase/topoisomerase IV, subunit A C3E78_00040 PF03989 DNA gyrase C-terminal domain, beta-propeller C3E78_00045 PF12089 Transmembrane domain of unknown function (DUF3566) C3E78_00060 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_00060 PF00107 Zinc-binding dehydrogenase C3E78_00085 PF02525 Flavodoxin-like fold C3E78_00100 PF00005 ABC transporter C3E78_00100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3E78_00105 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_00110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3E78_00115 PF13185 GAF domain C3E78_00115 PF07730 Histidine kinase C3E78_00115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_00115 PF13492 GAF domain C3E78_00120 PF00072 Response regulator receiver domain C3E78_00120 PF00196 Bacterial regulatory proteins, luxR family C3E78_00125 PF00464 Serine hydroxymethyltransferase C3E78_00140 PF00378 Enoyl-CoA hydratase/isomerase C3E78_00145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C3E78_00150 PF01694 Rhomboid family C3E78_00155 PF06781 Cell division protein CrgA C3E78_00165 PF00069 Protein kinase domain C3E78_00165 PF03793 PASTA domain C3E78_00170 PF00905 Penicillin binding protein transpeptidase domain C3E78_00175 PF01098 Cell cycle protein C3E78_00185 PF16697 Inner membrane component of T3SS, cytoplasmic domain C3E78_00190 PF12401 Protein of unknown function (DUF2662) C3E78_00190 PF00498 FHA domain C3E78_00200 PF00083 Sugar (and other) transporter C3E78_00220 PF01965 DJ-1/PfpI family C3E78_00225 PF02467 Transcription factor WhiB C3E78_00230 PF00378 Enoyl-CoA hydratase/isomerase C3E78_00245 PF03009 Glycerophosphoryl diester phosphodiesterase family C3E78_00255 PF07690 Major Facilitator Superfamily C3E78_00265 PF00892 EamA-like transporter family C3E78_00270 PF00440 Bacterial regulatory proteins, tetR family C3E78_00270 PF17932 Tetracyclin repressor-like, C-terminal domain C3E78_00275 PF01039 Carboxyl transferase domain C3E78_00280 PF02785 Biotin carboxylase C-terminal domain C3E78_00280 PF00289 Biotin carboxylase, N-terminal domain C3E78_00280 PF00364 Biotin-requiring enzyme C3E78_00280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3E78_00285 PF00682 HMGL-like C3E78_00295 PF00106 short chain dehydrogenase C3E78_00305 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C3E78_00310 PF00216 Bacterial DNA-binding protein C3E78_00320 PF00581 Rhodanese-like domain C3E78_00340 PF13419 Haloacid dehalogenase-like hydrolase C3E78_00345 PF03636 Glycosyl hydrolase family 65, N-terminal domain C3E78_00345 PF03632 Glycosyl hydrolase family 65 central catalytic domain C3E78_00345 PF03633 Glycosyl hydrolase family 65, C-terminal domain C3E78_00355 PF00962 Adenosine/AMP deaminase C3E78_00360 PF00781 Diacylglycerol kinase catalytic domain C3E78_00365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3E78_00365 PF02403 Seryl-tRNA synthetase N-terminal domain C3E78_00375 PF01638 HxlR-like helix-turn-helix C3E78_00380 PF00248 Aldo/keto reductase family C3E78_00385 PF01894 Uncharacterised protein family UPF0047 C3E78_00400 PF10759 Protein of unknown function (DUF2587) C3E78_00405 PF16197 Ketoacyl-synthetase C-terminal extension C3E78_00405 PF00107 Zinc-binding dehydrogenase C3E78_00405 PF14765 Polyketide synthase dehydratase C3E78_00405 PF00698 Acyl transferase domain C3E78_00405 PF00550 Phosphopantetheine attachment site C3E78_00405 PF00109 Beta-ketoacyl synthase, N-terminal domain C3E78_00405 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_00405 PF08659 KR domain C3E78_00405 PF02801 Beta-ketoacyl synthase, C-terminal domain C3E78_00410 PF00795 Carbon-nitrogen hydrolase C3E78_00435 PF00990 Diguanylate cyclase, GGDEF domain C3E78_00470 PF13614 AAA domain C3E78_00475 PF00534 Glycosyl transferases group 1 C3E78_00475 PF13439 Glycosyltransferase Family 4 C3E78_00490 PF01943 Polysaccharide biosynthesis protein C3E78_00495 PF00534 Glycosyl transferases group 1 C3E78_00495 PF13439 Glycosyltransferase Family 4 C3E78_00510 PF02397 Bacterial sugar transferase C3E78_00515 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C3E78_00515 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C3E78_00515 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C3E78_00520 PF00753 Metallo-beta-lactamase superfamily C3E78_00525 PF07690 Major Facilitator Superfamily C3E78_00530 PF07690 Major Facilitator Superfamily C3E78_00545 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C3E78_00550 PF16363 GDP-mannose 4,6 dehydratase C3E78_00555 PF00483 Nucleotidyl transferase C3E78_00565 PF07690 Major Facilitator Superfamily C3E78_00570 PF00296 Luciferase-like monooxygenase C3E78_00580 PF00294 pfkB family carbohydrate kinase C3E78_00585 PF01081 KDPG and KHG aldolase C3E78_00590 PF01042 Endoribonuclease L-PSP C3E78_00595 PF00144 Beta-lactamase C3E78_00600 PF00005 ABC transporter C3E78_00600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3E78_00605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3E78_00605 PF00005 ABC transporter C3E78_00610 PF00291 Pyridoxal-phosphate dependent enzyme C3E78_00615 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_00615 PF12911 N-terminal TM domain of oligopeptide transport permease C C3E78_00620 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_00625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3E78_00645 PF01541 GIY-YIG catalytic domain C3E78_00650 PF00311 Phosphoenolpyruvate carboxylase C3E78_00655 PF00109 Beta-ketoacyl synthase, N-terminal domain C3E78_00655 PF02801 Beta-ketoacyl synthase, C-terminal domain C3E78_00655 PF08659 KR domain C3E78_00655 PF00550 Phosphopantetheine attachment site C3E78_00655 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_00655 PF14765 Polyketide synthase dehydratase C3E78_00655 PF16197 Ketoacyl-synthetase C-terminal extension C3E78_00655 PF00698 Acyl transferase domain C3E78_00660 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain C3E78_00660 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain C3E78_00680 PF02899 Phage integrase, N-terminal SAM-like domain C3E78_00680 PF00589 Phage integrase family C3E78_00715 PF00132 Bacterial transferase hexapeptide (six repeats) C3E78_00725 PF01757 Acyltransferase family C3E78_00740 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain C3E78_00740 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain C3E78_00745 PF01740 STAS domain C3E78_00750 PF01590 GAF domain C3E78_00750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_00750 PF00512 His Kinase A (phospho-acceptor) domain C3E78_00750 PF08446 PAS fold C3E78_00750 PF00360 Phytochrome region C3E78_00755 PF12697 Alpha/beta hydrolase family C3E78_00760 PF07228 Stage II sporulation protein E (SpoIIE) C3E78_00760 PF00672 HAMP domain C3E78_00765 PF04679 ATP dependent DNA ligase C terminal region C3E78_00765 PF01068 ATP dependent DNA ligase domain C3E78_00785 PF04545 Sigma-70, region 4 C3E78_00785 PF04539 Sigma-70 region 3 C3E78_00785 PF04542 Sigma-70 region 2 C3E78_00800 PF02735 Ku70/Ku80 beta-barrel domain C3E78_00805 PF00132 Bacterial transferase hexapeptide (six repeats) C3E78_00810 PF00171 Aldehyde dehydrogenase family C3E78_00815 PF00171 Aldehyde dehydrogenase family C3E78_00820 PF00202 Aminotransferase class-III C3E78_00825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3E78_00825 PF03466 LysR substrate binding domain C3E78_00850 PF00378 Enoyl-CoA hydratase/isomerase C3E78_00860 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C3E78_00860 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C3E78_00860 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C3E78_00865 PF02233 NAD(P) transhydrogenase beta subunit C3E78_00880 PF14437 MafB19-like deaminase C3E78_00880 PF11734 TilS substrate C-terminal domain C3E78_00880 PF01171 PP-loop family C3E78_00885 PF14765 Polyketide synthase dehydratase C3E78_00885 PF00550 Phosphopantetheine attachment site C3E78_00885 PF00698 Acyl transferase domain C3E78_00885 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_00885 PF00107 Zinc-binding dehydrogenase C3E78_00885 PF16197 Ketoacyl-synthetase C-terminal extension C3E78_00885 PF00109 Beta-ketoacyl synthase, N-terminal domain C3E78_00885 PF08659 KR domain C3E78_00885 PF02801 Beta-ketoacyl synthase, C-terminal domain C3E78_00890 PF00296 Luciferase-like monooxygenase C3E78_00900 PF00296 Luciferase-like monooxygenase C3E78_00905 PF03358 NADPH-dependent FMN reductase C3E78_00910 PF00485 Phosphoribulokinase / Uridine kinase family C3E78_00925 PF02016 LD-carboxypeptidase N-terminal domain C3E78_00925 PF17676 LD-carboxypeptidase C-terminal domain C3E78_00930 PF00005 ABC transporter C3E78_00930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3E78_00935 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_00935 PF12911 N-terminal TM domain of oligopeptide transport permease C C3E78_00940 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_00945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3E78_00950 PF07687 Peptidase dimerisation domain C3E78_00950 PF01546 Peptidase family M20/M25/M40 C3E78_00970 PF00106 short chain dehydrogenase C3E78_00975 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C3E78_00975 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C3E78_00980 PF00676 Dehydrogenase E1 component C3E78_00985 PF02780 Transketolase, C-terminal domain C3E78_00985 PF02779 Transketolase, pyrimidine binding domain C3E78_00990 PF02817 e3 binding domain C3E78_00990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3E78_00990 PF00364 Biotin-requiring enzyme C3E78_01000 PF16859 Tetracyclin repressor-like, C-terminal domain C3E78_01000 PF00440 Bacterial regulatory proteins, tetR family C3E78_01010 PF00248 Aldo/keto reductase family C3E78_01015 PF03099 Biotin/lipoate A/B protein ligase family C3E78_01015 PF10437 Bacterial lipoate protein ligase C-terminus C3E78_01025 PF00487 Fatty acid desaturase C3E78_01030 PF00175 Oxidoreductase NAD-binding domain C3E78_01030 PF00111 2Fe-2S iron-sulfur cluster binding domain C3E78_01030 PF00970 Oxidoreductase FAD-binding domain C3E78_01035 PF00155 Aminotransferase class I and II C3E78_01055 PF03471 Transporter associated domain C3E78_01055 PF02080 TrkA-C domain C3E78_01055 PF00999 Sodium/hydrogen exchanger family C3E78_01080 PF05199 GMC oxidoreductase C3E78_01090 PF00293 NUDIX domain C3E78_01100 PF01593 Flavin containing amine oxidoreductase C3E78_01105 PF00535 Glycosyl transferase family 2 C3E78_01140 PF01593 Flavin containing amine oxidoreductase C3E78_01145 PF00348 Polyprenyl synthetase C3E78_01160 PF01575 MaoC like domain C3E78_01165 PF00378 Enoyl-CoA hydratase/isomerase C3E78_01170 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_01175 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_01180 PF00005 ABC transporter C3E78_01180 PF17912 MalK OB fold domain C3E78_01190 PF00378 Enoyl-CoA hydratase/isomerase C3E78_01195 PF00501 AMP-binding enzyme C3E78_01195 PF13193 AMP-binding enzyme C-terminal domain C3E78_01200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_01200 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_01200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_01215 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_01215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_01215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_01220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_01220 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_01220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_01225 PF00108 Thiolase, N-terminal domain C3E78_01225 PF02803 Thiolase, C-terminal domain C3E78_01240 PF00893 Small Multidrug Resistance protein C3E78_01245 PF00893 Small Multidrug Resistance protein C3E78_01255 PF07690 Major Facilitator Superfamily C3E78_01260 PF02909 Tetracyclin repressor-like, C-terminal domain C3E78_01260 PF00440 Bacterial regulatory proteins, tetR family C3E78_01270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_01270 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_01270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_01285 PF12169 DNA polymerase III subunits gamma and tau domain III C3E78_01290 PF00425 chorismate binding enzyme C3E78_01290 PF04715 Anthranilate synthase component I, N terminal region C3E78_01295 PF00117 Glutamine amidotransferase class-I C3E78_01300 PF07969 Amidohydrolase family C3E78_01305 PF00440 Bacterial regulatory proteins, tetR family C3E78_01310 PF02132 RecR protein C3E78_01310 PF13662 Toprim domain C3E78_01315 PF00696 Amino acid kinase family C3E78_01315 PF01842 ACT domain C3E78_01315 PF13840 ACT domain C3E78_01320 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3E78_01320 PF02774 Semialdehyde dehydrogenase, dimerisation domain C3E78_01325 PF00501 AMP-binding enzyme C3E78_01325 PF13193 AMP-binding enzyme C-terminal domain C3E78_01335 PF00149 Calcineurin-like phosphoesterase C3E78_01345 PF00912 Transglycosylase C3E78_01345 PF00905 Penicillin binding protein transpeptidase domain C3E78_01350 PF02467 Transcription factor WhiB C3E78_01355 PF02374 Anion-transporting ATPase C3E78_01360 PF02374 Anion-transporting ATPase C3E78_01380 PF16123 Hydroxyacylglutathione hydrolase C-terminus C3E78_01380 PF00753 Metallo-beta-lactamase superfamily C3E78_01385 PF00027 Cyclic nucleotide-binding domain C3E78_01385 PF13545 Crp-like helix-turn-helix domain C3E78_01390 PF10576 Iron-sulfur binding domain of endonuclease III C3E78_01390 PF00730 HhH-GPD superfamily base excision DNA repair protein C3E78_01390 PF00633 Helix-hairpin-helix motif C3E78_01395 PF00578 AhpC/TSA family C3E78_01400 PF00293 NUDIX domain C3E78_01405 PF18509 Magnetochrome domain C3E78_01405 PF17820 PDZ domain C3E78_01420 PF16177 Acetyl-coenzyme A synthetase N-terminus C3E78_01420 PF00501 AMP-binding enzyme C3E78_01420 PF13193 AMP-binding enzyme C-terminal domain C3E78_01425 PF00196 Bacterial regulatory proteins, luxR family C3E78_01425 PF13185 GAF domain C3E78_01430 PF00474 Sodium:solute symporter family C3E78_01440 PF00474 Sodium:solute symporter family C3E78_01450 PF04397 LytTr DNA-binding domain C3E78_01450 PF00072 Response regulator receiver domain C3E78_01455 PF07694 5TMR of 5TMR-LYT C3E78_01455 PF06580 Histidine kinase C3E78_01460 PF02361 Cobalt transport protein C3E78_01465 PF00005 ABC transporter C3E78_01470 PF02632 BioY family C3E78_01475 PF00440 Bacterial regulatory proteins, tetR family C3E78_01480 PF00478 IMP dehydrogenase / GMP reductase domain C3E78_01480 PF00571 CBS domain C3E78_01505 PF00437 Type II/IV secretion system protein C3E78_01540 PF01757 Acyltransferase family C3E78_01545 PF09369 Domain of unknown function (DUF1998) C3E78_01545 PF00271 Helicase conserved C-terminal domain C3E78_01545 PF00270 DEAD/DEAH box helicase C3E78_01550 PF01740 STAS domain C3E78_01555 PF03030 Inorganic H+ pyrophosphatase C3E78_01560 PF05175 Methyltransferase small domain C3E78_01560 PF17827 PrmC N-terminal domain C3E78_01580 PF13368 Topoisomerase C-terminal repeat C3E78_01580 PF01751 Toprim domain C3E78_01580 PF01131 DNA topoisomerase C3E78_01590 PF02223 Thymidylate kinase C3E78_01595 PF12169 DNA polymerase III subunits gamma and tau domain III C3E78_01600 PF00561 alpha/beta hydrolase fold C3E78_01605 PF02153 Prephenate dehydrogenase C3E78_01605 PF01817 Chorismate mutase type II C3E78_01625 PF02082 Transcriptional regulator C3E78_01630 PF16123 Hydroxyacylglutathione hydrolase C-terminus C3E78_01630 PF00753 Metallo-beta-lactamase superfamily C3E78_01635 PF07690 Major Facilitator Superfamily C3E78_01640 PF00378 Enoyl-CoA hydratase/isomerase C3E78_01645 PF01638 HxlR-like helix-turn-helix C3E78_01650 PF01571 Aminomethyltransferase folate-binding domain C3E78_01650 PF01266 FAD dependent oxidoreductase C3E78_01650 PF08669 Glycine cleavage T-protein C-terminal barrel domain C3E78_01650 PF16350 FAD dependent oxidoreductase central domain C3E78_01660 PF03793 PASTA domain C3E78_01660 PF00069 Protein kinase domain C3E78_01665 PF01022 Bacterial regulatory protein, arsR family C3E78_01670 PF01758 Sodium Bile acid symporter family C3E78_01675 PF01451 Low molecular weight phosphotyrosine protein phosphatase C3E78_01685 PF00155 Aminotransferase class I and II C3E78_01690 PF07690 Major Facilitator Superfamily C3E78_01695 PF04203 Sortase domain C3E78_01700 PF00156 Phosphoribosyl transferase domain C3E78_01715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3E78_01715 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_01720 PF01116 Fructose-bisphosphate aldolase class-II C3E78_01735 PF00781 Diacylglycerol kinase catalytic domain C3E78_01750 PF00709 Adenylosuccinate synthetase C3E78_01755 PF02844 Phosphoribosylglycinamide synthetase, N domain C3E78_01755 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C3E78_01755 PF02843 Phosphoribosylglycinamide synthetase, C domain C3E78_01760 PF10397 Adenylosuccinate lyase C-terminus C3E78_01760 PF00206 Lyase C3E78_01770 PF01259 SAICAR synthetase C3E78_01775 PF13193 AMP-binding enzyme C-terminal domain C3E78_01775 PF00501 AMP-binding enzyme C3E78_01780 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase C3E78_01805 PF00270 DEAD/DEAH box helicase C3E78_01805 PF00271 Helicase conserved C-terminal domain C3E78_01815 PF03358 NADPH-dependent FMN reductase C3E78_01815 PF01566 Natural resistance-associated macrophage protein C3E78_01830 PF06827 Zinc finger found in FPG and IleRS C3E78_01830 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C3E78_01855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3E78_01860 PF02769 AIR synthase related protein, C-terminal domain C3E78_01860 PF00586 AIR synthase related protein, N-terminal domain C3E78_01860 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C3E78_01880 PF00501 AMP-binding enzyme C3E78_01880 PF13193 AMP-binding enzyme C-terminal domain C3E78_01890 PF00156 Phosphoribosyl transferase domain C3E78_01895 PF02769 AIR synthase related protein, C-terminal domain C3E78_01895 PF00586 AIR synthase related protein, N-terminal domain C3E78_01905 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C3E78_01905 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C3E78_01910 PF00390 Malic enzyme, N-terminal domain C3E78_01910 PF03949 Malic enzyme, NAD binding domain C3E78_01920 PF01047 MarR family C3E78_01925 PF08362 YcdC-like protein, C-terminal region C3E78_01925 PF00440 Bacterial regulatory proteins, tetR family C3E78_01930 PF00106 short chain dehydrogenase C3E78_01945 PF00881 Nitroreductase family C3E78_01970 PF00005 ABC transporter C3E78_01970 PF00571 CBS domain C3E78_01975 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_01980 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_01990 PF03176 MMPL family C3E78_02000 PF00196 Bacterial regulatory proteins, luxR family C3E78_02000 PF00072 Response regulator receiver domain C3E78_02005 PF00561 alpha/beta hydrolase fold C3E78_02010 PF00749 tRNA synthetases class I (E and Q), catalytic domain C3E78_02015 PF00583 Acetyltransferase (GNAT) family C3E78_02020 PF08448 PAS fold C3E78_02020 PF00512 His Kinase A (phospho-acceptor) domain C3E78_02020 PF00072 Response regulator receiver domain C3E78_02020 PF13426 PAS domain C3E78_02020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_02025 PF01740 STAS domain C3E78_02030 PF00067 Cytochrome P450 C3E78_02040 PF00534 Glycosyl transferases group 1 C3E78_02040 PF13439 Glycosyltransferase Family 4 C3E78_02045 PF04101 Glycosyltransferase family 28 C-terminal domain C3E78_02045 PF03033 Glycosyltransferase family 28 N-terminal domain C3E78_02050 PF02709 N-terminal domain of galactosyltransferase C3E78_02050 PF00535 Glycosyl transferase family 2 C3E78_02065 PF01068 ATP dependent DNA ligase domain C3E78_02065 PF04679 ATP dependent DNA ligase C terminal region C3E78_02075 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_02075 PF13823 Alcohol dehydrogenase GroES-associated C3E78_02075 PF00107 Zinc-binding dehydrogenase C3E78_02080 PF04107 Glutamate-cysteine ligase family 2(GCS2) C3E78_02090 PF00106 short chain dehydrogenase C3E78_02100 PF03631 Virulence factor BrkB C3E78_02110 PF00011 Hsp20/alpha crystallin family C3E78_02120 PF17827 PrmC N-terminal domain C3E78_02120 PF05175 Methyltransferase small domain C3E78_02135 PF01757 Acyltransferase family C3E78_02145 PF00248 Aldo/keto reductase family C3E78_02155 PF00440 Bacterial regulatory proteins, tetR family C3E78_02180 PF02678 Pirin C3E78_02180 PF17954 Quercetinase C-terminal cupin domain C3E78_02185 PF01220 Dehydroquinase class II C3E78_02200 PF00535 Glycosyl transferase family 2 C3E78_02205 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C3E78_02205 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C3E78_02205 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C3E78_02210 PF01757 Acyltransferase family C3E78_02225 PF00535 Glycosyl transferase family 2 C3E78_02250 PF07722 Peptidase C26 C3E78_02265 PF00561 alpha/beta hydrolase fold C3E78_02280 PF01022 Bacterial regulatory protein, arsR family C3E78_02290 PF07969 Amidohydrolase family C3E78_02300 PF13399 LytR cell envelope-related transcriptional attenuator C3E78_02300 PF03816 Cell envelope-related transcriptional attenuator domain C3E78_02385 PF02811 PHP domain C3E78_02385 PF14579 Helix-hairpin-helix motif C3E78_02385 PF11490 DNA polymerase III polC-type N-terminus II C3E78_02385 PF00929 Exonuclease C3E78_02385 PF14480 DNA polymerase III polC-type N-terminus I C3E78_02385 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C3E78_02385 PF07733 Bacterial DNA polymerase III alpha NTPase domain C3E78_02410 PF01645 Conserved region in glutamate synthase C3E78_02415 PF00672 HAMP domain C3E78_02415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_02415 PF00512 His Kinase A (phospho-acceptor) domain C3E78_02420 PF00072 Response regulator receiver domain C3E78_02420 PF00486 Transcriptional regulatory protein, C terminal C3E78_02450 PF00072 Response regulator receiver domain C3E78_02450 PF01627 Hpt domain C3E78_02450 PF17149 Periplasmic sensor domain found in signal transduction proteins C3E78_02450 PF00672 HAMP domain C3E78_02450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_02450 PF00512 His Kinase A (phospho-acceptor) domain C3E78_02455 PF07690 Major Facilitator Superfamily C3E78_02470 PF01384 Phosphate transporter family C3E78_02475 PF00005 ABC transporter C3E78_02480 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_02485 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_02490 PF12849 PBP superfamily domain C3E78_02495 PF00300 Histidine phosphatase superfamily (branch 1) C3E78_02495 PF00293 NUDIX domain C3E78_02505 PF13089 Polyphosphate kinase N-terminal domain C3E78_02505 PF17941 Polyphosphate kinase C-terminal domain 1 C3E78_02505 PF13090 Polyphosphate kinase C-terminal domain 2 C3E78_02505 PF02503 Polyphosphate kinase middle domain C3E78_02510 PF07859 alpha/beta hydrolase fold C3E78_02515 PF00583 Acetyltransferase (GNAT) family C3E78_02520 PF01039 Carboxyl transferase domain C3E78_02525 PF02515 CoA-transferase family III C3E78_02535 PF07729 FCD domain C3E78_02535 PF00392 Bacterial regulatory proteins, gntR family C3E78_02540 PF01925 Sulfite exporter TauE/SafE C3E78_02545 PF00486 Transcriptional regulatory protein, C terminal C3E78_02565 PF01370 NAD dependent epimerase/dehydratase family C3E78_02570 PF01943 Polysaccharide biosynthesis protein C3E78_02580 PF00534 Glycosyl transferases group 1 C3E78_02580 PF13439 Glycosyltransferase Family 4 C3E78_02595 PF02397 Bacterial sugar transferase C3E78_02600 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3E78_02605 PF02719 Polysaccharide biosynthesis protein C3E78_02610 PF13614 AAA domain C3E78_02630 PF00581 Rhodanese-like domain C3E78_02635 PF07210 Protein of unknown function (DUF1416) C3E78_02640 PF02580 D-Tyr-tRNA(Tyr) deacylase C3E78_02645 PF08768 Domain of unknown function (DUF1794) C3E78_02650 PF01571 Aminomethyltransferase folate-binding domain C3E78_02660 PF13614 AAA domain C3E78_02665 PF00271 Helicase conserved C-terminal domain C3E78_02665 PF00270 DEAD/DEAH box helicase C3E78_02665 PF03880 DbpA RNA binding domain C3E78_02670 PF01238 Phosphomannose isomerase type I C3E78_02675 PF00483 Nucleotidyl transferase C3E78_02675 PF01050 Mannose-6-phosphate isomerase C3E78_02705 PF01381 Helix-turn-helix C3E78_02720 PF02028 BCCT, betaine/carnitine/choline family transporter C3E78_02750 PF00009 Elongation factor Tu GTP binding domain C3E78_02750 PF00679 Elongation factor G C-terminus C3E78_02750 PF14492 Elongation Factor G, domain II C3E78_02750 PF03144 Elongation factor Tu domain 2 C3E78_02760 PF07690 Major Facilitator Superfamily C3E78_02765 PF13193 AMP-binding enzyme C-terminal domain C3E78_02765 PF00501 AMP-binding enzyme C3E78_02770 PF00106 short chain dehydrogenase C3E78_02775 PF13439 Glycosyltransferase Family 4 C3E78_02775 PF00534 Glycosyl transferases group 1 C3E78_02780 PF10722 Putative bacterial sensory transduction regulator C3E78_02790 PF00300 Histidine phosphatase superfamily (branch 1) C3E78_02795 PF00486 Transcriptional regulatory protein, C terminal C3E78_02795 PF00072 Response regulator receiver domain C3E78_02800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_02800 PF00512 His Kinase A (phospho-acceptor) domain C3E78_02805 PF01895 PhoU domain C3E78_02815 PF02559 CarD-like/TRCF domain C3E78_02820 PF02542 YgbB family C3E78_02835 PF01406 tRNA synthetases class I (C) catalytic domain C3E78_02835 PF09190 DALR domain C3E78_02840 PF08032 RNA 2'-O ribose methyltransferase substrate binding C3E78_02840 PF00588 SpoU rRNA Methylase family C3E78_02850 PF12833 Helix-turn-helix domain C3E78_02850 PF14525 AraC-binding-like domain C3E78_02860 PF00171 Aldehyde dehydrogenase family C3E78_02865 PF00107 Zinc-binding dehydrogenase C3E78_02865 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_02870 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_02870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3E78_02880 PF13193 AMP-binding enzyme C-terminal domain C3E78_02880 PF00501 AMP-binding enzyme C3E78_02885 PF00378 Enoyl-CoA hydratase/isomerase C3E78_02890 PF00106 short chain dehydrogenase C3E78_02895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_02895 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_02895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_02900 PF02515 CoA-transferase family III C3E78_02905 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_02905 PF00107 Zinc-binding dehydrogenase C3E78_02910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_02910 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_02910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_02930 PF02803 Thiolase, C-terminal domain C3E78_02930 PF00108 Thiolase, N-terminal domain C3E78_02945 PF00440 Bacterial regulatory proteins, tetR family C3E78_02955 PF02653 Branched-chain amino acid transport system / permease component C3E78_02960 PF02653 Branched-chain amino acid transport system / permease component C3E78_02960 PF11862 Domain of unknown function (DUF3382) C3E78_02965 PF00005 ABC transporter C3E78_02965 PF12399 Branched-chain amino acid ATP-binding cassette transporter C3E78_02970 PF00005 ABC transporter C3E78_02980 PF01613 Flavin reductase like domain C3E78_02985 PF00296 Luciferase-like monooxygenase C3E78_02990 PF02653 Branched-chain amino acid transport system / permease component C3E78_02995 PF02653 Branched-chain amino acid transport system / permease component C3E78_03005 PF01144 Coenzyme A transferase C3E78_03010 PF01144 Coenzyme A transferase C3E78_03015 PF09339 IclR helix-turn-helix domain C3E78_03015 PF01614 Bacterial transcriptional regulator C3E78_03020 PF04030 D-arabinono-1,4-lactone oxidase C3E78_03020 PF01565 FAD binding domain C3E78_03055 PF00440 Bacterial regulatory proteins, tetR family C3E78_03060 PF00106 short chain dehydrogenase C3E78_03070 PF00563 EAL domain C3E78_03070 PF00990 Diguanylate cyclase, GGDEF domain C3E78_03070 PF03707 Bacterial signalling protein N terminal repeat C3E78_03075 PF00282 Pyridoxal-dependent decarboxylase conserved domain C3E78_03090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3E78_03105 PF00005 ABC transporter C3E78_03105 PF17755 UvrA DNA-binding domain C3E78_03105 PF17760 UvrA interaction domain C3E78_03120 PF02634 FdhD/NarQ family C3E78_03125 PF03575 Peptidase family S51 C3E78_03135 PF01594 AI-2E family transporter C3E78_03140 PF03167 Uracil DNA glycosylase superfamily C3E78_03145 PF07690 Major Facilitator Superfamily C3E78_03155 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C3E78_03155 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C3E78_03180 PF00282 Pyridoxal-dependent decarboxylase conserved domain C3E78_03190 PF00005 ABC transporter C3E78_03195 PF00982 Glycosyltransferase family 20 C3E78_03200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3E78_03225 PF02597 ThiS family C3E78_03230 PF00313 'Cold-shock' DNA-binding domain C3E78_03265 PF00118 TCP-1/cpn60 chaperonin family C3E78_03270 PF03301 Tryptophan 2,3-dioxygenase C3E78_03275 PF00005 ABC transporter C3E78_03285 PF06426 Serine acetyltransferase, N-terminal C3E78_03285 PF00132 Bacterial transferase hexapeptide (six repeats) C3E78_03295 PF00171 Aldehyde dehydrogenase family C3E78_03345 PF02397 Bacterial sugar transferase C3E78_03350 PF13193 AMP-binding enzyme C-terminal domain C3E78_03350 PF00501 AMP-binding enzyme C3E78_03360 PF04542 Sigma-70 region 2 C3E78_03360 PF08281 Sigma-70, region 4 C3E78_03375 PF00313 'Cold-shock' DNA-binding domain C3E78_03380 PF07690 Major Facilitator Superfamily C3E78_03385 PF11228 Protein of unknown function (DUF3027) C3E78_03390 PF07690 Major Facilitator Superfamily C3E78_03405 PF00860 Permease family C3E78_03410 PF00132 Bacterial transferase hexapeptide (six repeats) C3E78_03415 PF00266 Aminotransferase class-V C3E78_03425 PF01642 Methylmalonyl-CoA mutase C3E78_03430 PF01642 Methylmalonyl-CoA mutase C3E78_03430 PF02310 B12 binding domain C3E78_03440 PF08379 Bacterial transglutaminase-like N-terminal region C3E78_03440 PF01841 Transglutaminase-like superfamily C3E78_03450 PF00535 Glycosyl transferase family 2 C3E78_03455 PF00285 Citrate synthase, C-terminal domain C3E78_03460 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C3E78_03460 PF01243 Pyridoxamine 5'-phosphate oxidase C3E78_03465 PF01467 Cytidylyltransferase-like C3E78_03485 PF03441 FAD binding domain of DNA photolyase C3E78_03485 PF00875 DNA photolyase C3E78_03490 PF01325 Iron dependent repressor, N-terminal DNA binding domain C3E78_03490 PF18357 Diphteria toxin repressor SH3 domain C3E78_03490 PF02742 Iron dependent repressor, metal binding and dimerisation domain C3E78_03500 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_03500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3E78_03515 PF05922 Peptidase inhibitor I9 C3E78_03515 PF00082 Subtilase family C3E78_03530 PF13344 Haloacid dehalogenase-like hydrolase C3E78_03545 PF01741 Large-conductance mechanosensitive channel, MscL C3E78_03560 PF00571 CBS domain C3E78_03560 PF03471 Transporter associated domain C3E78_03560 PF01595 Cyclin M transmembrane N-terminal domain C3E78_03565 PF01595 Cyclin M transmembrane N-terminal domain C3E78_03565 PF00571 CBS domain C3E78_03570 PF01804 Penicillin amidase C3E78_03575 PF01812 5-formyltetrahydrofolate cyclo-ligase family C3E78_03585 PF00994 Probable molybdopterin binding domain C3E78_03585 PF03454 MoeA C-terminal region (domain IV) C3E78_03585 PF03453 MoeA N-terminal region (domain I and II) C3E78_03590 PF01967 MoaC family C3E78_03595 PF00994 Probable molybdopterin binding domain C3E78_03630 PF10609 NUBPL iron-transfer P-loop NTPase C3E78_03635 PF00437 Type II/IV secretion system protein C3E78_03660 PF00487 Fatty acid desaturase C3E78_03665 PF00301 Rubredoxin C3E78_03670 PF00301 Rubredoxin C3E78_03675 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_03675 PF14759 Reductase C-terminal C3E78_03700 PF00563 EAL domain C3E78_03700 PF00990 Diguanylate cyclase, GGDEF domain C3E78_03700 PF08447 PAS fold C3E78_03700 PF08448 PAS fold C3E78_03705 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C3E78_03705 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase C3E78_03715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3E78_03720 PF08264 Anticodon-binding domain of tRNA C3E78_03720 PF09334 tRNA synthetases class I (M) C3E78_03725 PF01026 TatD related DNase C3E78_03730 PF03990 G5-linked-Ubiquitin-like domain C3E78_03730 PF07501 G5 domain C3E78_03730 PF06737 Transglycosylase-like domain C3E78_03735 PF00398 Ribosomal RNA adenine dimethylase C3E78_03740 PF06912 Protein of unknown function (DUF1275) C3E78_03745 PF01425 Amidase C3E78_03750 PF08544 GHMP kinases C terminal C3E78_03750 PF00288 GHMP kinases N terminal domain C3E78_03760 PF01494 FAD binding domain C3E78_03770 PF00005 ABC transporter C3E78_03770 PF16326 ABC transporter C-terminal domain C3E78_03770 PF12848 ABC transporter C3E78_03780 PF01425 Amidase C3E78_03795 PF00132 Bacterial transferase hexapeptide (six repeats) C3E78_03795 PF12804 MobA-like NTP transferase domain C3E78_03800 PF14572 Phosphoribosyl synthetase-associated domain C3E78_03800 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C3E78_03810 PF01386 Ribosomal L25p family C3E78_03810 PF14693 Ribosomal protein TL5, C-terminal domain C3E78_03815 PF01195 Peptidyl-tRNA hydrolase C3E78_03820 PF02397 Bacterial sugar transferase C3E78_03860 PF03808 Glycosyl transferase WecB/TagA/CpsF family C3E78_03865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C3E78_03865 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C3E78_03865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C3E78_03875 PF02350 UDP-N-acetylglucosamine 2-epimerase C3E78_03900 PF13439 Glycosyltransferase Family 4 C3E78_03900 PF00534 Glycosyl transferases group 1 C3E78_03905 PF00535 Glycosyl transferase family 2 C3E78_03905 PF00534 Glycosyl transferases group 1 C3E78_03915 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3E78_03925 PF00535 Glycosyl transferase family 2 C3E78_03935 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3E78_03940 PF16363 GDP-mannose 4,6 dehydratase C3E78_03945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3E78_03955 PF00132 Bacterial transferase hexapeptide (six repeats) C3E78_03960 PF03816 Cell envelope-related transcriptional attenuator domain C3E78_03970 PF00270 DEAD/DEAH box helicase C3E78_03970 PF03461 TRCF domain C3E78_03970 PF17757 UvrB interaction domain C3E78_03970 PF02559 CarD-like/TRCF domain C3E78_03970 PF00271 Helicase conserved C-terminal domain C3E78_03980 PF13520 Amino acid permease C3E78_03990 PF03819 MazG nucleotide pyrophosphohydrolase domain C3E78_03995 PF00113 Enolase, C-terminal TIM barrel domain C3E78_03995 PF03952 Enolase, N-terminal domain C3E78_04010 PF02541 Ppx/GppA phosphatase family C3E78_04020 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain C3E78_04020 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain C3E78_04020 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain C3E78_04020 PF08531 Alpha-L-rhamnosidase N-terminal domain C3E78_04025 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain C3E78_04025 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain C3E78_04025 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain C3E78_04025 PF08531 Alpha-L-rhamnosidase N-terminal domain C3E78_04030 PF08125 Mannitol dehydrogenase C-terminal domain C3E78_04030 PF01232 Mannitol dehydrogenase Rossmann domain C3E78_04040 PF00356 Bacterial regulatory proteins, lacI family C3E78_04045 PF00005 ABC transporter C3E78_04050 PF02653 Branched-chain amino acid transport system / permease component C3E78_04055 PF02653 Branched-chain amino acid transport system / permease component C3E78_04075 PF00596 Class II Aldolase and Adducin N-terminal domain C3E78_04080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3E78_04080 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3E78_04085 PF01070 FMN-dependent dehydrogenase C3E78_04095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3E78_04100 PF01012 Electron transfer flavoprotein domain C3E78_04100 PF00766 Electron transfer flavoprotein FAD-binding domain C3E78_04105 PF01012 Electron transfer flavoprotein domain C3E78_04110 PF01266 FAD dependent oxidoreductase C3E78_04110 PF16350 FAD dependent oxidoreductase central domain C3E78_04110 PF01571 Aminomethyltransferase folate-binding domain C3E78_04110 PF08669 Glycine cleavage T-protein C-terminal barrel domain C3E78_04120 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_04125 PF00571 CBS domain C3E78_04125 PF00005 ABC transporter C3E78_04130 PF00732 GMC oxidoreductase C3E78_04130 PF05199 GMC oxidoreductase C3E78_04135 PF00171 Aldehyde dehydrogenase family C3E78_04140 PF09339 IclR helix-turn-helix domain C3E78_04140 PF01614 Bacterial transcriptional regulator C3E78_04145 PF00551 Formyl transferase C3E78_04150 PF06253 Trimethylamine methyltransferase (MTTB) C3E78_04160 PF02310 B12 binding domain C3E78_04160 PF02607 B12 binding domain C3E78_04195 PF00248 Aldo/keto reductase family C3E78_04205 PF00378 Enoyl-CoA hydratase/isomerase C3E78_04215 PF02390 Putative methyltransferase C3E78_04225 PF13472 GDSL-like Lipase/Acylhydrolase family C3E78_04235 PF05726 Pirin C-terminal cupin domain C3E78_04235 PF02678 Pirin C3E78_04240 PF00106 short chain dehydrogenase C3E78_04245 PF00667 FAD binding domain C3E78_04245 PF00067 Cytochrome P450 C3E78_04245 PF00175 Oxidoreductase NAD-binding domain C3E78_04245 PF00258 Flavodoxin C3E78_04250 PF05368 NmrA-like family C3E78_04255 PF01638 HxlR-like helix-turn-helix C3E78_04260 PF03167 Uracil DNA glycosylase superfamily C3E78_04265 PF01625 Peptide methionine sulfoxide reductase C3E78_04270 PF01594 AI-2E family transporter C3E78_04275 PF04237 YjbR C3E78_04285 PF00753 Metallo-beta-lactamase superfamily C3E78_04325 PF17755 UvrA DNA-binding domain C3E78_04330 PF01047 MarR family C3E78_04335 PF03176 MMPL family C3E78_04340 PF00144 Beta-lactamase C3E78_04350 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_04355 PF00005 ABC transporter C3E78_04355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3E78_04360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3E78_04360 PF00005 ABC transporter C3E78_04365 PF00144 Beta-lactamase C3E78_04380 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C3E78_04380 PF13378 Enolase C-terminal domain-like C3E78_04385 PF17853 GGDEF-like domain C3E78_04385 PF13556 PucR C-terminal helix-turn-helix domain C3E78_04395 PF00005 ABC transporter C3E78_04405 PF00196 Bacterial regulatory proteins, luxR family C3E78_04405 PF00072 Response regulator receiver domain C3E78_04415 PF01037 Lrp/AsnC ligand binding domain C3E78_04430 PF00535 Glycosyl transferase family 2 C3E78_04440 PF00989 PAS fold C3E78_04440 PF11808 Phosphate regulon sensor protein PhoR C3E78_04440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_04440 PF00512 His Kinase A (phospho-acceptor) domain C3E78_04445 PF00072 Response regulator receiver domain C3E78_04445 PF00158 Sigma-54 interaction domain C3E78_04445 PF02954 Bacterial regulatory protein, Fis family C3E78_04450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3E78_04475 PF00211 Adenylate and Guanylate cyclase catalytic domain C3E78_04480 PF01475 Ferric uptake regulator family C3E78_04485 PF00141 Peroxidase C3E78_04490 PF00106 short chain dehydrogenase C3E78_04505 PF00378 Enoyl-CoA hydratase/isomerase C3E78_04520 PF00171 Aldehyde dehydrogenase family C3E78_04525 PF01593 Flavin containing amine oxidoreductase C3E78_04530 PF00202 Aminotransferase class-III C3E78_04535 PF00440 Bacterial regulatory proteins, tetR family C3E78_04535 PF17754 MftR C-terminal domain C3E78_04540 PF07690 Major Facilitator Superfamily C3E78_04545 PF00069 Protein kinase domain C3E78_04555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3E78_04575 PF00444 Ribosomal protein L36 C3E78_04580 PF03462 PCRF domain C3E78_04580 PF00472 RF-1 domain C3E78_04585 PF03551 Transcriptional regulator PadR-like family C3E78_04590 PF00571 CBS domain C3E78_04595 PF00459 Inositol monophosphatase family C3E78_04600 PF03193 RsgA GTPase C3E78_04605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C3E78_04615 PF02586 SOS response associated peptidase (SRAP) C3E78_04620 PF04542 Sigma-70 region 2 C3E78_04620 PF08281 Sigma-70, region 4 C3E78_04655 PF03462 PCRF domain C3E78_04655 PF00472 RF-1 domain C3E78_04670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3E78_04670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C3E78_04675 PF13407 Periplasmic binding protein domain C3E78_04680 PF02653 Branched-chain amino acid transport system / permease component C3E78_04685 PF00005 ABC transporter C3E78_04690 PF01325 Iron dependent repressor, N-terminal DNA binding domain C3E78_04690 PF00480 ROK family C3E78_04695 PF00005 ABC transporter C3E78_04700 PF18075 FtsX extracellular domain C3E78_04700 PF02687 FtsX-like permease family C3E78_04705 PF01551 Peptidase family M23 C3E78_04705 PF08460 Bacterial SH3 domain C3E78_04715 PF01668 SmpB protein C3E78_04725 PF07690 Major Facilitator Superfamily C3E78_04740 PF01329 Pterin 4 alpha carbinolamine dehydratase C3E78_04750 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C3E78_04750 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C3E78_04755 PF00270 DEAD/DEAH box helicase C3E78_04755 PF08494 DEAD/H associated C3E78_04755 PF00271 Helicase conserved C-terminal domain C3E78_04775 PF11258 Protein of unknown function (DUF3048) N-terminal domain C3E78_04775 PF17479 Protein of unknown function (DUF3048) C-terminal domain C3E78_04780 PF00440 Bacterial regulatory proteins, tetR family C3E78_04795 PF02622 Uncharacterized ACR, COG1678 C3E78_04805 PF04851 Type III restriction enzyme, res subunit C3E78_04810 PF07859 alpha/beta hydrolase fold C3E78_04830 PF00296 Luciferase-like monooxygenase C3E78_04840 PF17668 Acetyltransferase (GNAT) domain C3E78_04840 PF13530 Sterol carrier protein domain C3E78_04845 PF00857 Isochorismatase family C3E78_04850 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C3E78_04850 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C3E78_04855 PF02617 ATP-dependent Clp protease adaptor protein ClpS C3E78_04865 PF14464 Prokaryotic homologs of the JAB domain C3E78_04870 PF02597 ThiS family C3E78_04875 PF00291 Pyridoxal-phosphate dependent enzyme C3E78_04885 PF14572 Phosphoribosyl synthetase-associated domain C3E78_04885 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C3E78_04890 PF01177 Asp/Glu/Hydantoin racemase C3E78_04895 PF12706 Beta-lactamase superfamily domain C3E78_04900 PF01138 3' exoribonuclease family, domain 1 C3E78_04900 PF03725 3' exoribonuclease family, domain 2 C3E78_04905 PF01725 Ham1 family C3E78_04915 PF00588 SpoU rRNA Methylase family C3E78_04920 PF03594 Benzoate membrane transport protein C3E78_04945 PF00578 AhpC/TSA family C3E78_04955 PF00166 Chaperonin 10 Kd subunit C3E78_04965 PF00245 Alkaline phosphatase C3E78_04970 PF03328 HpcH/HpaI aldolase/citrate lyase family C3E78_04975 PF03328 HpcH/HpaI aldolase/citrate lyase family C3E78_04990 PF03814 Potassium-transporting ATPase A subunit C3E78_05000 PF02669 K+-transporting ATPase, c chain C3E78_05005 PF00582 Universal stress protein family C3E78_05005 PF02702 Osmosensitive K+ channel His kinase sensor domain C3E78_05005 PF00512 His Kinase A (phospho-acceptor) domain C3E78_05005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_05005 PF13493 Domain of unknown function (DUF4118) C3E78_05010 PF00486 Transcriptional regulatory protein, C terminal C3E78_05010 PF00072 Response regulator receiver domain C3E78_05025 PF01258 Prokaryotic dksA/traR C4-type zinc finger C3E78_05045 PF05726 Pirin C-terminal cupin domain C3E78_05045 PF02678 Pirin C3E78_05055 PF00934 PE family C3E78_05055 PF00300 Histidine phosphatase superfamily (branch 1) C3E78_05060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3E78_05060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3E78_05065 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C3E78_05065 PF01266 FAD dependent oxidoreductase C3E78_05080 PF00929 Exonuclease C3E78_05090 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C3E78_05095 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C3E78_05100 PF01810 LysE type translocator C3E78_05105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3E78_05105 PF03466 LysR substrate binding domain C3E78_05115 PF00471 Ribosomal protein L33 C3E78_05135 PF07650 KH domain C3E78_05135 PF01926 50S ribosome-binding GTPase C3E78_05145 PF12848 ABC transporter C3E78_05145 PF00005 ABC transporter C3E78_05160 PF04264 YceI-like domain C3E78_05170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_05170 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_05170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_05175 PF02803 Thiolase, C-terminal domain C3E78_05175 PF00108 Thiolase, N-terminal domain C3E78_05185 PF01575 MaoC like domain C3E78_05190 PF01648 4'-phosphopantetheinyl transferase superfamily C3E78_05195 PF01047 MarR family C3E78_05195 PF00480 ROK family C3E78_05200 PF01915 Glycosyl hydrolase family 3 C-terminal domain C3E78_05200 PF07691 PA14 domain C3E78_05200 PF00933 Glycosyl hydrolase family 3 N terminal domain C3E78_05200 PF14310 Fibronectin type III-like domain C3E78_05220 PF01039 Carboxyl transferase domain C3E78_05225 PF00364 Biotin-requiring enzyme C3E78_05235 PF01152 Bacterial-like globin C3E78_05240 PF00924 Mechanosensitive ion channel C3E78_05250 PF00106 short chain dehydrogenase C3E78_05255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_05255 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_05255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_05265 PF03060 Nitronate monooxygenase C3E78_05270 PF00535 Glycosyl transferase family 2 C3E78_05275 PF00809 Pterin binding enzyme C3E78_05280 PF01433 Peptidase family M1 domain C3E78_05280 PF11838 ERAP1-like C-terminal domain C3E78_05285 PF04107 Glutamate-cysteine ligase family 2(GCS2) C3E78_05290 PF01323 DSBA-like thioredoxin domain C3E78_05295 PF07859 alpha/beta hydrolase fold C3E78_05305 PF02502 Ribose/Galactose Isomerase C3E78_05310 PF06827 Zinc finger found in FPG and IleRS C3E78_05310 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C3E78_05310 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C3E78_05315 PF13581 Histidine kinase-like ATPase domain C3E78_05315 PF13466 STAS domain C3E78_05315 PF07228 Stage II sporulation protein E (SpoIIE) C3E78_05315 PF08448 PAS fold C3E78_05335 PF05697 Bacterial trigger factor protein (TF) C3E78_05335 PF05698 Bacterial trigger factor protein (TF) C-terminus C3E78_05335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3E78_05355 PF00392 Bacterial regulatory proteins, gntR family C3E78_05355 PF07702 UTRA domain C3E78_05360 PF01261 Xylose isomerase-like TIM barrel C3E78_05365 PF00294 pfkB family carbohydrate kinase C3E78_05375 PF04962 KduI/IolB family C3E78_05380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3E78_05380 PF00205 Thiamine pyrophosphate enzyme, central domain C3E78_05380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3E78_05385 PF00171 Aldehyde dehydrogenase family C3E78_05395 PF02653 Branched-chain amino acid transport system / permease component C3E78_05400 PF00005 ABC transporter C3E78_05405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3E78_05405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C3E78_05410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C3E78_05410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3E78_05420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C3E78_05420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3E78_05425 PF01261 Xylose isomerase-like TIM barrel C3E78_05445 PF00574 Clp protease C3E78_05450 PF00574 Clp protease C3E78_05455 PF10431 C-terminal, D2-small domain, of ClpB protein C3E78_05455 PF07724 AAA domain (Cdc48 subfamily) C3E78_05455 PF06689 ClpX C4-type zinc finger C3E78_05460 PF03435 Saccharopine dehydrogenase NADP binding domain C3E78_05465 PF00381 PTS HPr component phosphorylation site C3E78_05470 PF00294 pfkB family carbohydrate kinase C3E78_05475 PF08220 DeoR-like helix-turn-helix domain C3E78_05475 PF00455 DeoR C terminal sensor domain C3E78_05480 PF00391 PEP-utilising enzyme, mobile domain C3E78_05480 PF02896 PEP-utilising enzyme, TIM barrel domain C3E78_05480 PF05524 PEP-utilising enzyme, N-terminal C3E78_05485 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_05485 PF00107 Zinc-binding dehydrogenase C3E78_05490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3E78_05495 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3E78_05495 PF02378 Phosphotransferase system, EIIC C3E78_05500 PF02378 Phosphotransferase system, EIIC C3E78_05500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3E78_05505 PF01654 Cytochrome bd terminal oxidase subunit I C3E78_05515 PF08264 Anticodon-binding domain of tRNA C3E78_05515 PF00133 tRNA synthetases class I (I, L, M and V) C3E78_05520 PF03176 MMPL family C3E78_05525 PF02875 Mur ligase family, glutamate ligase domain C3E78_05525 PF08245 Mur ligase middle domain C3E78_05545 PF00005 ABC transporter C3E78_05545 PF17912 MalK OB fold domain C3E78_05550 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_05555 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_05565 PF00128 Alpha amylase, catalytic domain C3E78_05570 PF00334 Nucleoside diphosphate kinase C3E78_05590 PF00535 Glycosyl transferase family 2 C3E78_05595 PF08241 Methyltransferase domain C3E78_05610 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase C3E78_05615 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase C3E78_05630 PF07690 Major Facilitator Superfamily C3E78_05640 PF10150 Ribonuclease E/G family C3E78_05645 PF00829 Ribosomal prokaryotic L21 protein C3E78_05650 PF01016 Ribosomal L27 protein C3E78_05655 PF09269 Domain of unknown function (DUF1967) C3E78_05655 PF01018 GTP1/OBG C3E78_05655 PF01926 50S ribosome-binding GTPase C3E78_05660 PF00696 Amino acid kinase family C3E78_05660 PF01472 PUA domain C3E78_05665 PF00171 Aldehyde dehydrogenase family C3E78_05670 PF01467 Cytidylyltransferase-like C3E78_05680 PF00300 Histidine phosphatase superfamily (branch 1) C3E78_05720 PF07690 Major Facilitator Superfamily C3E78_05725 PF05649 Peptidase family M13 C3E78_05725 PF01431 Peptidase family M13 C3E78_05730 PF08021 Siderophore-interacting FAD-binding domain C3E78_05730 PF04954 Siderophore-interacting protein C3E78_05735 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C3E78_05760 PF03275 UDP-galactopyranose mutase C3E78_05775 PF02386 Cation transport protein C3E78_05780 PF02080 TrkA-C domain C3E78_05780 PF02254 TrkA-N domain C3E78_05790 PF16485 Protealysin propeptide C3E78_05790 PF02868 Thermolysin metallopeptidase, alpha-helical domain C3E78_05790 PF01447 Thermolysin metallopeptidase, catalytic domain C3E78_05795 PF00474 Sodium:solute symporter family C3E78_05805 PF09334 tRNA synthetases class I (M) C3E78_05805 PF13603 Leucyl-tRNA synthetase, Domain 2 C3E78_05805 PF08264 Anticodon-binding domain of tRNA C3E78_05810 PF02645 Uncharacterised protein, DegV family COG1307 C3E78_05815 PF10531 SLBB domain C3E78_05820 PF03772 Competence protein C3E78_05820 PF00753 Metallo-beta-lactamase superfamily C3E78_05825 PF12320 Type 5 capsule protein repressor C-terminal domain C3E78_05825 PF00149 Calcineurin-like phosphoesterase C3E78_05830 PF13476 AAA domain C3E78_05845 PF01649 Ribosomal protein S20 C3E78_05850 PF06421 GTP-binding protein LepA C-terminus C3E78_05850 PF00009 Elongation factor Tu GTP binding domain C3E78_05850 PF00679 Elongation factor G C-terminus C3E78_05860 PF00501 AMP-binding enzyme C3E78_05865 PF04055 Radical SAM superfamily C3E78_05885 PF01628 HrcA protein C terminal domain C3E78_05890 PF00226 DnaJ domain C3E78_05890 PF00684 DnaJ central domain C3E78_05890 PF01556 DnaJ C terminal domain C3E78_05895 PF01230 HIT domain C3E78_05900 PF02562 PhoH-like protein C3E78_05905 PF02130 Uncharacterized protein family UPF0054 C3E78_05910 PF03471 Transporter associated domain C3E78_05910 PF01595 Cyclin M transmembrane N-terminal domain C3E78_05910 PF00571 CBS domain C3E78_05920 PF07650 KH domain C3E78_05920 PF01926 50S ribosome-binding GTPase C3E78_05935 PF00708 Acylphosphatase C3E78_05945 PF16124 RecQ zinc-binding C3E78_05945 PF00271 Helicase conserved C-terminal domain C3E78_05945 PF00270 DEAD/DEAH box helicase C3E78_05945 PF00570 HRDC domain C3E78_05945 PF09382 RQC domain C3E78_05975 PF07726 ATPase family associated with various cellular activities (AAA) C3E78_05975 PF17863 AAA lid domain C3E78_05990 PF04229 GrpB protein C3E78_05995 PF13409 Glutathione S-transferase, N-terminal domain C3E78_06005 PF00682 HMGL-like C3E78_06005 PF08502 LeuA allosteric (dimerisation) domain C3E78_06010 PF07690 Major Facilitator Superfamily C3E78_06015 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3E78_06015 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3E78_06025 PF00230 Major intrinsic protein C3E78_06030 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3E78_06030 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3E78_06035 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C3E78_06035 PF01266 FAD dependent oxidoreductase C3E78_06045 PF00171 Aldehyde dehydrogenase family C3E78_06050 PF07063 Domain of unknown function (DUF1338) C3E78_06065 PF02565 Recombination protein O C terminal C3E78_06065 PF11967 Recombination protein O N terminal C3E78_06070 PF01255 Putative undecaprenyl diphosphate synthase C3E78_06080 PF13192 Thioredoxin domain C3E78_06080 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_06100 PF06259 Alpha/beta hydrolase C3E78_06105 PF01557 Fumarylacetoacetate (FAA) hydrolase family C3E78_06110 PF00749 tRNA synthetases class I (E and Q), catalytic domain C3E78_06125 PF11838 ERAP1-like C-terminal domain C3E78_06125 PF01433 Peptidase family M1 domain C3E78_06135 PF12833 Helix-turn-helix domain C3E78_06135 PF00730 HhH-GPD superfamily base excision DNA repair protein C3E78_06135 PF02805 Metal binding domain of Ada C3E78_06135 PF06029 AlkA N-terminal domain C3E78_06140 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C3E78_06140 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C3E78_06155 PF09339 IclR helix-turn-helix domain C3E78_06155 PF01614 Bacterial transcriptional regulator C3E78_06160 PF00330 Aconitase family (aconitate hydratase) C3E78_06165 PF00694 Aconitase C-terminal domain C3E78_06180 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C3E78_06180 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C3E78_06185 PF01053 Cys/Met metabolism PLP-dependent enzyme C3E78_06190 PF01820 D-ala D-ala ligase N-terminus C3E78_06190 PF07478 D-ala D-ala ligase C-terminus C3E78_06205 PF02769 AIR synthase related protein, C-terminal domain C3E78_06205 PF00586 AIR synthase related protein, N-terminal domain C3E78_06210 PF01425 Amidase C3E78_06215 PF00830 Ribosomal L28 family C3E78_06220 PF13684 Dihydroxyacetone kinase family C3E78_06220 PF02734 DAK2 domain C3E78_06225 PF00270 DEAD/DEAH box helicase C3E78_06225 PF00271 Helicase conserved C-terminal domain C3E78_06225 PF17191 RecG wedge domain C3E78_06235 PF01467 Cytidylyltransferase-like C3E78_06240 PF04542 Sigma-70 region 2 C3E78_06240 PF08281 Sigma-70, region 4 C3E78_06240 PF12680 SnoaL-like domain C3E78_06250 PF00817 impB/mucB/samB family C3E78_06250 PF11799 impB/mucB/samB family C-terminal domain C3E78_06255 PF02620 Large ribosomal RNA subunit accumulation protein YceD C3E78_06260 PF01783 Ribosomal L32p protein family C3E78_06265 PF00035 Double-stranded RNA binding motif C3E78_06265 PF14622 Ribonuclease-III-like C3E78_06270 PF06827 Zinc finger found in FPG and IleRS C3E78_06270 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C3E78_06270 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C3E78_06280 PF01966 HD domain C3E78_06280 PF13286 Phosphohydrolase-associated domain C3E78_06285 PF10410 DnaB-helicase binding domain of primase C3E78_06285 PF08278 DNA primase DnaG DnaB-binding C3E78_06285 PF13662 Toprim domain C3E78_06285 PF08275 DNA primase catalytic core, N-terminal domain C3E78_06285 PF01807 CHC2 zinc finger C3E78_06290 PF00140 Sigma-70 factor, region 1.2 C3E78_06290 PF04542 Sigma-70 region 2 C3E78_06290 PF04545 Sigma-70, region 4 C3E78_06300 PF00291 Pyridoxal-phosphate dependent enzyme C3E78_06305 PF03466 LysR substrate binding domain C3E78_06305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3E78_06315 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_06315 PF13823 Alcohol dehydrogenase GroES-associated C3E78_06315 PF00107 Zinc-binding dehydrogenase C3E78_06325 PF02585 GlcNAc-PI de-N-acetylase C3E78_06355 PF00550 Phosphopantetheine attachment site C3E78_06360 PF12697 Alpha/beta hydrolase family C3E78_06370 PF00456 Transketolase, thiamine diphosphate binding domain C3E78_06370 PF17831 Pyruvate dehydrogenase E1 component middle domain C3E78_06375 PF11253 Protein of unknown function (DUF3052) C3E78_06380 PF00578 AhpC/TSA family C3E78_06410 PF00561 alpha/beta hydrolase fold C3E78_06415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_06415 PF07730 Histidine kinase C3E78_06420 PF00196 Bacterial regulatory proteins, luxR family C3E78_06420 PF00072 Response regulator receiver domain C3E78_06425 PF00196 Bacterial regulatory proteins, luxR family C3E78_06425 PF00072 Response regulator receiver domain C3E78_06430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3E78_06430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3E78_06430 PF00205 Thiamine pyrophosphate enzyme, central domain C3E78_06445 PF13649 Methyltransferase domain C3E78_06445 PF17827 PrmC N-terminal domain C3E78_06450 PF00271 Helicase conserved C-terminal domain C3E78_06450 PF09382 RQC domain C3E78_06450 PF00570 HRDC domain C3E78_06450 PF00270 DEAD/DEAH box helicase C3E78_06450 PF16124 RecQ zinc-binding C3E78_06455 PF00248 Aldo/keto reductase family C3E78_06460 PF01784 NIF3 (NGG1p interacting factor 3) C3E78_06470 PF13456 Reverse transcriptase-like C3E78_06470 PF00300 Histidine phosphatase superfamily (branch 1) C3E78_06475 PF03883 Peroxide stress protein YaaA C3E78_06485 PF01169 Uncharacterized protein family UPF0016 C3E78_06495 PF00248 Aldo/keto reductase family C3E78_06500 PF00557 Metallopeptidase family M24 C3E78_06515 PF02548 Ketopantoate hydroxymethyltransferase C3E78_06520 PF00795 Carbon-nitrogen hydrolase C3E78_06520 PF02540 NAD synthase C3E78_06530 PF00120 Glutamine synthetase, catalytic domain C3E78_06530 PF03951 Glutamine synthetase, beta-Grasp domain C3E78_06535 PF08281 Sigma-70, region 4 C3E78_06535 PF04542 Sigma-70 region 2 C3E78_06545 PF08335 GlnD PII-uridylyltransferase C3E78_06545 PF03710 Glutamate-ammonia ligase adenylyltransferase C3E78_06555 PF02467 Transcription factor WhiB C3E78_06565 PF00487 Fatty acid desaturase C3E78_06570 PF00970 Oxidoreductase FAD-binding domain C3E78_06570 PF00042 Globin C3E78_06570 PF00175 Oxidoreductase NAD-binding domain C3E78_06575 PF00440 Bacterial regulatory proteins, tetR family C3E78_06590 PF01740 STAS domain C3E78_06595 PF00582 Universal stress protein family C3E78_06600 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C3E78_06600 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C3E78_06615 PF03144 Elongation factor Tu domain 2 C3E78_06615 PF00009 Elongation factor Tu GTP binding domain C3E78_06615 PF16658 Class II release factor RF3, C-terminal domain C3E78_06620 PF01367 5'-3' exonuclease, C-terminal SAM fold C3E78_06620 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C3E78_06620 PF00476 DNA polymerase family A C3E78_06625 PF00689 Cation transporting ATPase, C-terminus C3E78_06625 PF00690 Cation transporter/ATPase, N-terminus C3E78_06640 PF07690 Major Facilitator Superfamily C3E78_06655 PF09339 IclR helix-turn-helix domain C3E78_06655 PF01614 Bacterial transcriptional regulator C3E78_06670 PF05368 NmrA-like family C3E78_06710 PF00107 Zinc-binding dehydrogenase C3E78_06710 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_06725 PF02694 Uncharacterised BCR, YnfA/UPF0060 family C3E78_06735 PF03176 MMPL family C3E78_06750 PF03176 MMPL family C3E78_06755 PF07730 Histidine kinase C3E78_06760 PF00196 Bacterial regulatory proteins, luxR family C3E78_06760 PF00072 Response regulator receiver domain C3E78_06765 PF00384 Molybdopterin oxidoreductase C3E78_06765 PF01568 Molydopterin dinucleotide binding domain C3E78_06770 PF03364 Polyketide cyclase / dehydrase and lipid transport C3E78_06775 PF02661 Fic/DOC family C3E78_06775 PF12728 Helix-turn-helix domain C3E78_06785 PF02627 Carboxymuconolactone decarboxylase family C3E78_06790 PF02583 Metal-sensitive transcriptional repressor C3E78_06795 PF00120 Glutamine synthetase, catalytic domain C3E78_06795 PF03951 Glutamine synthetase, beta-Grasp domain C3E78_06805 PF13829 Domain of unknown function (DUF4191) C3E78_06810 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C3E78_06810 PF04055 Radical SAM superfamily C3E78_06815 PF07730 Histidine kinase C3E78_06820 PF00072 Response regulator receiver domain C3E78_06820 PF00196 Bacterial regulatory proteins, luxR family C3E78_06825 PF00005 ABC transporter C3E78_06825 PF13732 Domain of unknown function (DUF4162) C3E78_06835 PF03099 Biotin/lipoate A/B protein ligase family C3E78_06860 PF01790 Prolipoprotein diacylglyceryl transferase C3E78_06870 PF01370 NAD dependent epimerase/dehydratase family C3E78_06870 PF08338 Domain of unknown function (DUF1731) C3E78_06875 PF00364 Biotin-requiring enzyme C3E78_06875 PF02817 e3 binding domain C3E78_06875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3E78_06880 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_06880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3E78_06890 PF00144 Beta-lactamase C3E78_06895 PF00883 Cytosol aminopeptidase family, catalytic domain C3E78_06895 PF02789 Cytosol aminopeptidase family, N-terminal domain C3E78_06900 PF08669 Glycine cleavage T-protein C-terminal barrel domain C3E78_06900 PF01571 Aminomethyltransferase folate-binding domain C3E78_06910 PF11241 Protein of unknown function (DUF3043) C3E78_06920 PF01435 Peptidase family M48 C3E78_06930 PF12897 Alanine-glyoxylate amino-transferase C3E78_06935 PF02595 Glycerate kinase family C3E78_06940 PF01521 Iron-sulphur cluster biosynthesis C3E78_06945 PF00294 pfkB family carbohydrate kinase C3E78_06950 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C3E78_06955 PF00115 Cytochrome C and Quinol oxidase polypeptide I C3E78_06960 PF12270 Cytochrome c oxidase subunit IV C3E78_06965 PF03734 L,D-transpeptidase catalytic domain C3E78_06965 PF17964 Bacterial Ig domain C3E78_06970 PF13631 Cytochrome b(N-terminal)/b6/petB C3E78_06975 PF00355 Rieske [2Fe-2S] domain C3E78_06980 PF00034 Cytochrome c C3E78_06980 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C3E78_06985 PF00510 Cytochrome c oxidase subunit III C3E78_06995 PF02885 Glycosyl transferase family, helical bundle domain C3E78_06995 PF00591 Glycosyl transferase family, a/b domain C3E78_07005 PF01541 GIY-YIG catalytic domain C3E78_07005 PF00929 Exonuclease C3E78_07015 PF00877 NlpC/P60 family C3E78_07025 PF00501 AMP-binding enzyme C3E78_07040 PF00480 ROK family C3E78_07045 PF00480 ROK family C3E78_07050 PF12146 Serine aminopeptidase, S33 C3E78_07060 PF00365 Phosphofructokinase C3E78_07070 PF01474 Class-II DAHP synthetase family C3E78_07075 PF03793 PASTA domain C3E78_07075 PF00069 Protein kinase domain C3E78_07080 PF00348 Polyprenyl synthetase C3E78_07085 PF02219 Methylenetetrahydrofolate reductase C3E78_07090 PF01266 FAD dependent oxidoreductase C3E78_07105 PF02381 MraZ protein, putative antitoxin-like C3E78_07110 PF01795 MraW methylase family C3E78_07120 PF00905 Penicillin binding protein transpeptidase domain C3E78_07120 PF03717 Penicillin-binding Protein dimerisation domain C3E78_07125 PF01225 Mur ligase family, catalytic domain C3E78_07125 PF02875 Mur ligase family, glutamate ligase domain C3E78_07125 PF08245 Mur ligase middle domain C3E78_07130 PF01225 Mur ligase family, catalytic domain C3E78_07130 PF02875 Mur ligase family, glutamate ligase domain C3E78_07130 PF08245 Mur ligase middle domain C3E78_07135 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C3E78_07135 PF00953 Glycosyl transferase family 4 C3E78_07140 PF02875 Mur ligase family, glutamate ligase domain C3E78_07140 PF08245 Mur ligase middle domain C3E78_07145 PF01098 Cell cycle protein C3E78_07150 PF03033 Glycosyltransferase family 28 N-terminal domain C3E78_07150 PF04101 Glycosyltransferase family 28 C-terminal domain C3E78_07155 PF01225 Mur ligase family, catalytic domain C3E78_07155 PF02875 Mur ligase family, glutamate ligase domain C3E78_07155 PF08245 Mur ligase middle domain C3E78_07160 PF08478 POTRA domain, FtsQ-type C3E78_07165 PF12327 FtsZ family, C-terminal domain C3E78_07165 PF00091 Tubulin/FtsZ family, GTPase domain C3E78_07170 PF02578 Multi-copper polyphenol oxidoreductase laccase C3E78_07175 PF01168 Alanine racemase, N-terminal domain C3E78_07180 PF04472 Cell division protein SepF C3E78_07195 PF08264 Anticodon-binding domain of tRNA C3E78_07195 PF00133 tRNA synthetases class I (I, L, M and V) C3E78_07200 PF01258 Prokaryotic dksA/traR C4-type zinc finger C3E78_07205 PF01252 Signal peptidase (SPase) II C3E78_07210 PF00849 RNA pseudouridylate synthase C3E78_07215 PF00155 Aminotransferase class I and II C3E78_07225 PF00005 ABC transporter C3E78_07225 PF13732 Domain of unknown function (DUF4162) C3E78_07230 PF01061 ABC-2 type transporter C3E78_07240 PF02811 PHP domain C3E78_07240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C3E78_07240 PF14579 Helix-hairpin-helix motif C3E78_07240 PF07733 Bacterial DNA polymerase III alpha NTPase domain C3E78_07250 PF04073 Aminoacyl-tRNA editing domain C3E78_07255 PF00815 Histidinol dehydrogenase C3E78_07260 PF00155 Aminotransferase class I and II C3E78_07265 PF00475 Imidazoleglycerol-phosphate dehydratase C3E78_07270 PF00117 Glutamine amidotransferase class-I C3E78_07280 PF00977 Histidine biosynthesis protein C3E78_07290 PF00977 Histidine biosynthesis protein C3E78_07295 PF00664 ABC transporter transmembrane region C3E78_07295 PF00005 ABC transporter C3E78_07300 PF00005 ABC transporter C3E78_07300 PF00664 ABC transporter transmembrane region C3E78_07305 PF01502 Phosphoribosyl-AMP cyclohydrolase C3E78_07320 PF06271 RDD family C3E78_07330 PF00218 Indole-3-glycerol phosphate synthase C3E78_07335 PF00291 Pyridoxal-phosphate dependent enzyme C3E78_07340 PF00290 Tryptophan synthase alpha chain C3E78_07345 PF01790 Prolipoprotein diacylglyceryl transferase C3E78_07360 PF00582 Universal stress protein family C3E78_07365 PF00310 Glutamine amidotransferases class-II C3E78_07365 PF04898 Glutamate synthase central domain C3E78_07365 PF01645 Conserved region in glutamate synthase C3E78_07365 PF01493 GXGXG motif C3E78_07370 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_07370 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C3E78_07375 PF02887 Pyruvate kinase, alpha/beta domain C3E78_07375 PF00224 Pyruvate kinase, barrel domain C3E78_07385 PF03861 ANTAR domain C3E78_07385 PF00072 Response regulator receiver domain C3E78_07390 PF13458 Periplasmic binding protein C3E78_07400 PF00005 ABC transporter C3E78_07405 PF12399 Branched-chain amino acid ATP-binding cassette transporter C3E78_07405 PF00005 ABC transporter C3E78_07415 PF02653 Branched-chain amino acid transport system / permease component C3E78_07420 PF04474 Protein of unknown function (DUF554) C3E78_07430 PF00476 DNA polymerase family A C3E78_07430 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C3E78_07430 PF01367 5'-3' exonuclease, C-terminal SAM fold C3E78_07450 PF02127 Aminopeptidase I zinc metalloprotease (M18) C3E78_07455 PF00575 S1 RNA binding domain C3E78_07460 PF13193 AMP-binding enzyme C-terminal domain C3E78_07460 PF00501 AMP-binding enzyme C3E78_07470 PF01121 Dephospho-CoA kinase C3E78_07475 PF00140 Sigma-70 factor, region 1.2 C3E78_07475 PF04539 Sigma-70 region 3 C3E78_07475 PF04545 Sigma-70, region 4 C3E78_07475 PF04542 Sigma-70 region 2 C3E78_07480 PF00326 Prolyl oligopeptidase family C3E78_07480 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C3E78_07485 PF00817 impB/mucB/samB family C3E78_07485 PF11799 impB/mucB/samB family C-terminal domain C3E78_07505 PF10415 Fumarase C C-terminus C3E78_07505 PF00206 Lyase C3E78_07510 PF03949 Malic enzyme, NAD binding domain C3E78_07510 PF00390 Malic enzyme, N-terminal domain C3E78_07530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_07530 PF00986 DNA gyrase B subunit, carboxyl terminus C3E78_07530 PF01751 Toprim domain C3E78_07530 PF00204 DNA gyrase B C3E78_07535 PF01757 Acyltransferase family C3E78_07540 PF00484 Carbonic anhydrase C3E78_07545 PF07690 Major Facilitator Superfamily C3E78_07555 PF03989 DNA gyrase C-terminal domain, beta-propeller C3E78_07555 PF00521 DNA gyrase/topoisomerase IV, subunit A C3E78_07575 PF00265 Thymidine kinase C3E78_07585 PF03458 UPF0126 domain C3E78_07590 PF00171 Aldehyde dehydrogenase family C3E78_07600 PF00762 Ferrochelatase C3E78_07605 PF00459 Inositol monophosphatase family C3E78_07625 PF00692 dUTPase C3E78_07645 PF02080 TrkA-C domain C3E78_07645 PF02254 TrkA-N domain C3E78_07650 PF02254 TrkA-N domain C3E78_07650 PF02080 TrkA-C domain C3E78_07655 PF13520 Amino acid permease C3E78_07660 PF05958 tRNA (Uracil-5-)-methyltransferase C3E78_07660 PF01938 TRAM domain C3E78_07670 PF00196 Bacterial regulatory proteins, luxR family C3E78_07680 PF00694 Aconitase C-terminal domain C3E78_07680 PF00330 Aconitase family (aconitate hydratase) C3E78_07690 PF13407 Periplasmic binding protein domain C3E78_07695 PF00005 ABC transporter C3E78_07700 PF02653 Branched-chain amino acid transport system / permease component C3E78_07705 PF01047 MarR family C3E78_07705 PF00480 ROK family C3E78_07715 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C3E78_07715 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C3E78_07730 PF01915 Glycosyl hydrolase family 3 C-terminal domain C3E78_07730 PF00933 Glycosyl hydrolase family 3 N terminal domain C3E78_07730 PF14310 Fibronectin type III-like domain C3E78_07740 PF03951 Glutamine synthetase, beta-Grasp domain C3E78_07740 PF00120 Glutamine synthetase, catalytic domain C3E78_07760 PF12680 SnoaL-like domain C3E78_07760 PF08281 Sigma-70, region 4 C3E78_07760 PF04542 Sigma-70 region 2 C3E78_07775 PF13443 Cro/C1-type HTH DNA-binding domain C3E78_07780 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C3E78_07795 PF08531 Alpha-L-rhamnosidase N-terminal domain C3E78_07795 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain C3E78_07795 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain C3E78_07795 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain C3E78_07805 PF01268 Formate--tetrahydrofolate ligase C3E78_07820 PF00440 Bacterial regulatory proteins, tetR family C3E78_07825 PF00248 Aldo/keto reductase family C3E78_07850 PF01551 Peptidase family M23 C3E78_07850 PF08460 Bacterial SH3 domain C3E78_07910 PF02797 Chalcone and stilbene synthases, C-terminal domain C3E78_07910 PF00195 Chalcone and stilbene synthases, N-terminal domain C3E78_07915 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family C3E78_07920 PF01494 FAD binding domain C3E78_07930 PF03707 Bacterial signalling protein N terminal repeat C3E78_07930 PF00563 EAL domain C3E78_07930 PF00990 Diguanylate cyclase, GGDEF domain C3E78_07935 PF12697 Alpha/beta hydrolase family C3E78_07945 PF00005 ABC transporter C3E78_07950 PF07730 Histidine kinase C3E78_07955 PF00196 Bacterial regulatory proteins, luxR family C3E78_07955 PF00072 Response regulator receiver domain C3E78_07970 PF00144 Beta-lactamase C3E78_08050 PF00561 alpha/beta hydrolase fold C3E78_08055 PF00480 ROK family C3E78_08060 PF01261 Xylose isomerase-like TIM barrel C3E78_08065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3E78_08065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3E78_08080 PF02780 Transketolase, C-terminal domain C3E78_08080 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C3E78_08080 PF02779 Transketolase, pyrimidine binding domain C3E78_08095 PF01575 MaoC like domain C3E78_08105 PF00108 Thiolase, N-terminal domain C3E78_08105 PF02803 Thiolase, C-terminal domain C3E78_08115 PF00271 Helicase conserved C-terminal domain C3E78_08115 PF04851 Type III restriction enzyme, res subunit C3E78_08115 PF02151 UvrB/uvrC motif C3E78_08115 PF12344 Ultra-violet resistance protein B C3E78_08115 PF17757 UvrB interaction domain C3E78_08130 PF03741 Integral membrane protein TerC family C3E78_08135 PF13520 Amino acid permease C3E78_08140 PF00067 Cytochrome P450 C3E78_08170 PF02656 Domain of unknown function (DUF202) C3E78_08185 PF16123 Hydroxyacylglutathione hydrolase C-terminus C3E78_08185 PF00753 Metallo-beta-lactamase superfamily C3E78_08190 PF00005 ABC transporter C3E78_08190 PF17755 UvrA DNA-binding domain C3E78_08190 PF17760 UvrA interaction domain C3E78_08195 PF05661 Protein of unknown function (DUF808) C3E78_08200 PF01541 GIY-YIG catalytic domain C3E78_08200 PF02151 UvrB/uvrC motif C3E78_08200 PF08459 UvrC Helix-hairpin-helix N-terminal C3E78_08205 PF03668 P-loop ATPase protein family C3E78_08210 PF01933 Uncharacterised protein family UPF0052 C3E78_08215 PF02650 WhiA C-terminal HTH domain C3E78_08215 PF14527 WhiA LAGLIDADG-like domain C3E78_08215 PF10298 WhiA N-terminal LAGLIDADG-like domain C3E78_08220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C3E78_08220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3E78_08225 PF00162 Phosphoglycerate kinase C3E78_08230 PF00121 Triosephosphate isomerase C3E78_08235 PF03840 Preprotein translocase SecG subunit C3E78_08240 PF13397 RNA polymerase-binding protein C3E78_08245 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C3E78_08255 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C3E78_08255 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C3E78_08260 PF00342 Phosphoglucose isomerase C3E78_08265 PF00923 Transaldolase/Fructose-6-phosphate aldolase C3E78_08270 PF02779 Transketolase, pyrimidine binding domain C3E78_08270 PF02780 Transketolase, C-terminal domain C3E78_08270 PF00456 Transketolase, thiamine diphosphate binding domain C3E78_08275 PF01040 UbiA prenyltransferase family C3E78_08300 PF00501 AMP-binding enzyme C3E78_08305 PF16884 N-terminal domain of oxidoreductase C3E78_08305 PF00107 Zinc-binding dehydrogenase C3E78_08310 PF07905 Purine catabolism regulatory protein-like family C3E78_08310 PF13556 PucR C-terminal helix-turn-helix domain C3E78_08310 PF17853 GGDEF-like domain C3E78_08335 PF00459 Inositol monophosphatase family C3E78_08350 PF00005 ABC transporter C3E78_08350 PF13732 Domain of unknown function (DUF4162) C3E78_08355 PF01068 ATP dependent DNA ligase domain C3E78_08355 PF04679 ATP dependent DNA ligase C terminal region C3E78_08360 PF04607 Region found in RelA / SpoT proteins C3E78_08365 PF04679 ATP dependent DNA ligase C terminal region C3E78_08365 PF13298 DNA polymerase Ligase (LigD) C3E78_08365 PF01068 ATP dependent DNA ligase domain C3E78_08380 PF01458 Uncharacterized protein family (UPF0051) C3E78_08385 PF01458 Uncharacterized protein family (UPF0051) C3E78_08390 PF00355 Rieske [2Fe-2S] domain C3E78_08395 PF00005 ABC transporter C3E78_08400 PF00266 Aminotransferase class-V C3E78_08405 PF01592 NifU-like N terminal domain C3E78_08410 PF01883 Iron-sulfur cluster assembly protein C3E78_08415 PF00005 ABC transporter C3E78_08415 PF12848 ABC transporter C3E78_08425 PF06463 Molybdenum Cofactor Synthesis C C3E78_08425 PF04055 Radical SAM superfamily C3E78_08440 PF07311 Dodecin C3E78_08450 PF01022 Bacterial regulatory protein, arsR family C3E78_08460 PF00005 ABC transporter C3E78_08470 PF01145 SPFH domain / Band 7 family C3E78_08480 PF01161 Phosphatidylethanolamine-binding protein C3E78_08485 PF00588 SpoU rRNA Methylase family C3E78_08495 PF01327 Polypeptide deformylase C3E78_08500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_08500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_08500 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_08505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_08505 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_08505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_08520 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_08520 PF13823 Alcohol dehydrogenase GroES-associated C3E78_08520 PF00107 Zinc-binding dehydrogenase C3E78_08525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3E78_08530 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C3E78_08530 PF00271 Helicase conserved C-terminal domain C3E78_08530 PF04408 Helicase associated domain (HA2) C3E78_08530 PF11898 Domain of unknown function (DUF3418) C3E78_08530 PF00270 DEAD/DEAH box helicase C3E78_08540 PF04228 Putative neutral zinc metallopeptidase C3E78_08545 PF04286 Protein of unknown function (DUF445) C3E78_08575 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3E78_08580 PF07690 Major Facilitator Superfamily C3E78_08600 PF00440 Bacterial regulatory proteins, tetR family C3E78_08620 PF00005 ABC transporter C3E78_08630 PF00561 alpha/beta hydrolase fold C3E78_08645 PF04960 Glutaminase C3E78_08655 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_08655 PF00107 Zinc-binding dehydrogenase C3E78_08660 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_08660 PF00107 Zinc-binding dehydrogenase C3E78_08670 PF00440 Bacterial regulatory proteins, tetR family C3E78_08675 PF03176 MMPL family C3E78_08680 PF00072 Response regulator receiver domain C3E78_08680 PF00196 Bacterial regulatory proteins, luxR family C3E78_08695 PF17932 Tetracyclin repressor-like, C-terminal domain C3E78_08695 PF00440 Bacterial regulatory proteins, tetR family C3E78_08700 PF12146 Serine aminopeptidase, S33 C3E78_08705 PF00440 Bacterial regulatory proteins, tetR family C3E78_08715 PF01638 HxlR-like helix-turn-helix C3E78_08730 PF00534 Glycosyl transferases group 1 C3E78_08735 PF01370 NAD dependent epimerase/dehydratase family C3E78_08740 PF00274 Fructose-bisphosphate aldolase class-I C3E78_08750 PF00296 Luciferase-like monooxygenase C3E78_08755 PF02525 Flavodoxin-like fold C3E78_08800 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C3E78_08800 PF04055 Radical SAM superfamily C3E78_08810 PF00795 Carbon-nitrogen hydrolase C3E78_08825 PF00795 Carbon-nitrogen hydrolase C3E78_08830 PF13439 Glycosyltransferase Family 4 C3E78_08830 PF00534 Glycosyl transferases group 1 C3E78_08845 PF00561 alpha/beta hydrolase fold C3E78_08845 PF00106 short chain dehydrogenase C3E78_08860 PF00291 Pyridoxal-phosphate dependent enzyme C3E78_08865 PF03176 MMPL family C3E78_08885 PF00990 Diguanylate cyclase, GGDEF domain C3E78_08885 PF03707 Bacterial signalling protein N terminal repeat C3E78_08885 PF00563 EAL domain C3E78_08890 PF13411 MerR HTH family regulatory protein C3E78_08890 PF02607 B12 binding domain C3E78_08890 PF02310 B12 binding domain C3E78_08895 PF00005 ABC transporter C3E78_08900 PF01032 FecCD transport family C3E78_08910 PF00106 short chain dehydrogenase C3E78_08940 PF13396 Phospholipase_D-nuclease N-terminal C3E78_08940 PF13091 PLD-like domain C3E78_08960 PF00005 ABC transporter C3E78_08960 PF08402 TOBE domain C3E78_08970 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C3E78_08975 PF00581 Rhodanese-like domain C3E78_08985 PF00547 Urease, gamma subunit C3E78_08995 PF00699 Urease beta subunit C3E78_09000 PF00449 Urease alpha-subunit, N-terminal domain C3E78_09000 PF01979 Amidohydrolase family C3E78_09005 PF01730 UreF C3E78_09010 PF02492 CobW/HypB/UreG, nucleotide-binding domain C3E78_09015 PF01774 UreD urease accessory protein C3E78_09020 PF03824 High-affinity nickel-transport protein C3E78_09030 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C3E78_09035 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C3E78_09040 PF01266 FAD dependent oxidoreductase C3E78_09055 PF00696 Amino acid kinase family C3E78_09060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C3E78_09060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C3E78_09070 PF03606 C4-dicarboxylate anaerobic carrier C3E78_09080 PF00689 Cation transporting ATPase, C-terminus C3E78_09080 PF00690 Cation transporter/ATPase, N-terminus C3E78_09090 PF00011 Hsp20/alpha crystallin family C3E78_09095 PF00072 Response regulator receiver domain C3E78_09095 PF00196 Bacterial regulatory proteins, luxR family C3E78_09105 PF07730 Histidine kinase C3E78_09105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_09105 PF13492 GAF domain C3E78_09105 PF13185 GAF domain C3E78_09110 PF17863 AAA lid domain C3E78_09110 PF01078 Magnesium chelatase, subunit ChlI C3E78_09130 PF01613 Flavin reductase like domain C3E78_09145 PF07690 Major Facilitator Superfamily C3E78_09190 PF01546 Peptidase family M20/M25/M40 C3E78_09190 PF07687 Peptidase dimerisation domain C3E78_09215 PF00248 Aldo/keto reductase family C3E78_09220 PF02673 Bacitracin resistance protein BacA C3E78_09225 PF01544 CorA-like Mg2+ transporter protein C3E78_09230 PF01406 tRNA synthetases class I (C) catalytic domain C3E78_09255 PF02607 B12 binding domain C3E78_09255 PF02310 B12 binding domain C3E78_09255 PF02574 Homocysteine S-methyltransferase C3E78_09255 PF00809 Pterin binding enzyme C3E78_09255 PF02965 Vitamin B12 dependent methionine synthase, activation domain C3E78_09260 PF13419 Haloacid dehalogenase-like hydrolase C3E78_09265 PF00571 CBS domain C3E78_09265 PF02163 Peptidase family M50 C3E78_09270 PF08704 tRNA methyltransferase complex GCD14 subunit C3E78_09275 PF00004 ATPase family associated with various cellular activities (AAA) C3E78_09275 PF17758 Proteasomal ATPase OB N-terminal domain C3E78_09275 PF16450 Proteasomal ATPase OB C-terminal domain C3E78_09285 PF00892 EamA-like transporter family C3E78_09295 PF03136 Pup-ligase protein C3E78_09300 PF00005 ABC transporter C3E78_09305 PF01032 FecCD transport family C3E78_09310 PF01032 FecCD transport family C3E78_09325 PF00227 Proteasome subunit C3E78_09330 PF00227 Proteasome subunit C3E78_09335 PF03136 Pup-ligase protein C3E78_09345 PF13280 WYL domain C3E78_09355 PF02416 mttA/Hcf106 family C3E78_09360 PF00902 Sec-independent protein translocase protein (TatC) C3E78_09365 PF00781 Diacylglycerol kinase catalytic domain C3E78_09370 PF08148 DSHCT (NUC185) domain C3E78_09370 PF00270 DEAD/DEAH box helicase C3E78_09370 PF00271 Helicase conserved C-terminal domain C3E78_09375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C3E78_09375 PF01367 5'-3' exonuclease, C-terminal SAM fold C3E78_09380 PF02225 PA domain C3E78_09380 PF04389 Peptidase family M28 C3E78_09390 PF00557 Metallopeptidase family M24 C3E78_09390 PF01321 Creatinase/Prolidase N-terminal domain C3E78_09395 PF00795 Carbon-nitrogen hydrolase C3E78_09400 PF00535 Glycosyl transferase family 2 C3E78_09405 PF13397 RNA polymerase-binding protein C3E78_09420 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C3E78_09430 PF00156 Phosphoribosyl transferase domain C3E78_09435 PF10944 Protein of unknown function (DUF2630) C3E78_09445 PF01694 Rhomboid family C3E78_09470 PF13302 Acetyltransferase (GNAT) domain C3E78_09475 PF16925 Tetracyclin repressor-like, C-terminal domain C3E78_09475 PF00440 Bacterial regulatory proteins, tetR family C3E78_09480 PF01425 Amidase C3E78_09485 PF00106 short chain dehydrogenase C3E78_09495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C3E78_09495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C3E78_09505 PF00106 short chain dehydrogenase C3E78_09510 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C3E78_09510 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain C3E78_09520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3E78_09520 PF03466 LysR substrate binding domain C3E78_09525 PF09924 Uncharacterised conserved protein (DUF2156) C3E78_09525 PF01336 OB-fold nucleic acid binding domain C3E78_09525 PF00152 tRNA synthetases class II (D, K and N) C3E78_09525 PF16995 Transmembrane region of lysyl-tRNA synthetase C3E78_09545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C3E78_09545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C3E78_09550 PF09350 Domain of unknown function (DUF1992) C3E78_09570 PF01300 Telomere recombination C3E78_09575 PF01507 Phosphoadenosine phosphosulfate reductase family C3E78_09580 PF01507 Phosphoadenosine phosphosulfate reductase family C3E78_09585 PF00009 Elongation factor Tu GTP binding domain C3E78_09590 PF10414 Sirohaem synthase dimerisation region C3E78_09590 PF14824 Sirohaem biosynthesis protein central C3E78_09590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3E78_09625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_09625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_09625 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_09630 PF04542 Sigma-70 region 2 C3E78_09630 PF04545 Sigma-70, region 4 C3E78_09635 PF10099 Anti-sigma-K factor rskA C3E78_09650 PF02347 Glycine cleavage system P-protein C3E78_09655 PF13411 MerR HTH family regulatory protein C3E78_09660 PF02577 Bifunctional nuclease C3E78_09665 PF00376 MerR family regulatory protein C3E78_09670 PF00498 FHA domain C3E78_09675 PF01597 Glycine cleavage H-protein C3E78_09680 PF05949 Bacterial protein of unknown function (DUF881) C3E78_09685 PF06947 Protein of unknown function (DUF1290) C3E78_09690 PF05949 Bacterial protein of unknown function (DUF881) C3E78_09695 PF01066 CDP-alcohol phosphatidyltransferase C3E78_09700 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C3E78_09700 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C3E78_09705 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) C3E78_09705 PF05425 Copper resistance protein D C3E78_09710 PF04234 CopC domain C3E78_09725 PF00202 Aminotransferase class-III C3E78_09750 PF00005 ABC transporter C3E78_09770 PF00293 NUDIX domain C3E78_09775 PF03641 Possible lysine decarboxylase C3E78_09800 PF02525 Flavodoxin-like fold C3E78_09805 PF00561 alpha/beta hydrolase fold C3E78_09815 PF00440 Bacterial regulatory proteins, tetR family C3E78_09845 PF01926 50S ribosome-binding GTPase C3E78_09845 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C3E78_09855 PF02224 Cytidylate kinase C3E78_09860 PF02153 Prephenate dehydrogenase C3E78_09865 PF00849 RNA pseudouridylate synthase C3E78_09865 PF01479 S4 domain C3E78_09870 PF04079 Segregation and condensation complex subunit ScpB C3E78_09875 PF02616 Segregation and condensation protein ScpA C3E78_09885 PF13614 AAA domain C3E78_09890 PF02899 Phage integrase, N-terminal SAM-like domain C3E78_09890 PF00589 Phage integrase family C3E78_09895 PF00293 NUDIX domain C3E78_09900 PF06418 CTP synthase N-terminus C3E78_09900 PF00117 Glutamine amidotransferase class-I C3E78_09905 PF11382 Copper transport outer membrane protein, MctB C3E78_09915 PF02463 RecF/RecN/SMC N terminal domain C3E78_09920 PF01513 ATP-NAD kinase C3E78_09925 PF01728 FtsJ-like methyltransferase C3E78_09925 PF01479 S4 domain C3E78_09935 PF18407 GCN5-related N-acetyltransferase like domain C3E78_09935 PF13344 Haloacid dehalogenase-like hydrolase C3E78_09965 PF00579 tRNA synthetases class I (W and Y) C3E78_09970 PF00582 Universal stress protein family C3E78_09980 PF00582 Universal stress protein family C3E78_09985 PF01970 Tripartite tricarboxylate transporter TctA family C3E78_09995 PF03401 Tripartite tricarboxylate transporter family receptor C3E78_10000 PF17203 Single cache domain 3 C3E78_10000 PF00989 PAS fold C3E78_10000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_10000 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C3E78_10005 PF12431 Transcriptional regulator C3E78_10005 PF00072 Response regulator receiver domain C3E78_10010 PF02245 Methylpurine-DNA glycosylase (MPG) C3E78_10015 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C3E78_10020 PF14698 Argininosuccinate lyase C-terminal C3E78_10020 PF00206 Lyase C3E78_10025 PF01316 Arginine repressor, DNA binding domain C3E78_10025 PF02863 Arginine repressor, C-terminal domain C3E78_10030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C3E78_10030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C3E78_10035 PF00202 Aminotransferase class-III C3E78_10040 PF00696 Amino acid kinase family C3E78_10045 PF01960 ArgJ family C3E78_10050 PF02774 Semialdehyde dehydrogenase, dimerisation domain C3E78_10050 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3E78_10055 PF00764 Arginosuccinate synthase C3E78_10065 PF03484 tRNA synthetase B5 domain C3E78_10065 PF03147 Ferredoxin-fold anticodon binding domain C3E78_10065 PF01588 Putative tRNA binding domain C3E78_10065 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C3E78_10065 PF03483 B3/4 domain C3E78_10070 PF01409 tRNA synthetases class II core domain (F) C3E78_10070 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C3E78_10075 PF00672 HAMP domain C3E78_10075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_10075 PF18698 Histidine kinase sensor domain C3E78_10075 PF00512 His Kinase A (phospho-acceptor) domain C3E78_10075 PF00989 PAS fold C3E78_10080 PF00588 SpoU rRNA Methylase family C3E78_10080 PF08032 RNA 2'-O ribose methyltransferase substrate binding C3E78_10085 PF00453 Ribosomal protein L20 C3E78_10090 PF01632 Ribosomal protein L35 C3E78_10095 PF00707 Translation initiation factor IF-3, C-terminal domain C3E78_10095 PF05198 Translation initiation factor IF-3, N-terminal domain C3E78_10120 PF08029 HisG, C-terminal domain C3E78_10120 PF01634 ATP phosphoribosyltransferase C3E78_10125 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C3E78_10130 PF00885 6,7-dimethyl-8-ribityllumazine synthase C3E78_10135 PF00925 GTP cyclohydrolase II C3E78_10135 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C3E78_10140 PF00677 Lumazine binding domain C3E78_10145 PF01872 RibD C-terminal domain C3E78_10145 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3E78_10150 PF00834 Ribulose-phosphate 3 epimerase family C3E78_10155 PF00440 Bacterial regulatory proteins, tetR family C3E78_10160 PF01029 NusB family C3E78_10160 PF01189 16S rRNA methyltransferase RsmB/F C3E78_10165 PF00551 Formyl transferase C3E78_10165 PF02911 Formyl transferase, C-terminal domain C3E78_10170 PF17764 3′ DNA-binding domain (3′BD) C3E78_10175 PF02773 S-adenosylmethionine synthetase, C-terminal domain C3E78_10175 PF02772 S-adenosylmethionine synthetase, central domain C3E78_10175 PF00438 S-adenosylmethionine synthetase, N-terminal domain C3E78_10180 PF04127 DNA / pantothenate metabolism flavoprotein C3E78_10180 PF02441 Flavoprotein C3E78_10185 PF01192 RNA polymerase Rpb6 C3E78_10190 PF00625 Guanylate kinase C3E78_10205 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C3E78_10210 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C3E78_10210 PF02142 MGS-like domain C3E78_10210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3E78_10215 PF00117 Glutamine amidotransferase class-I C3E78_10215 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C3E78_10220 PF01979 Amidohydrolase family C3E78_10225 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C3E78_10225 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C3E78_10235 PF03808 Glycosyl transferase WecB/TagA/CpsF family C3E78_10240 PF01029 NusB family C3E78_10245 PF09285 Elongation factor P, C-terminal C3E78_10245 PF08207 Elongation factor P (EF-P) KOW-like domain C3E78_10245 PF01132 Elongation factor P (EF-P) OB domain C3E78_10250 PF00557 Metallopeptidase family M24 C3E78_10250 PF01321 Creatinase/Prolidase N-terminal domain C3E78_10255 PF01761 3-dehydroquinate synthase C3E78_10260 PF01202 Shikimate kinase C3E78_10265 PF01264 Chorismate synthase C3E78_10275 PF08501 Shikimate dehydrogenase substrate binding domain C3E78_10275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C3E78_10285 PF03652 Holliday junction resolvase C3E78_10290 PF02272 DHHA1 domain C3E78_10290 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3E78_10290 PF01411 tRNA synthetases class II (A) C3E78_10305 PF16193 AAA C-terminal domain C3E78_10305 PF12002 MgsA AAA+ ATPase C terminal C3E78_10305 PF00004 ATPase family associated with various cellular activities (AAA) C3E78_10310 PF02938 GAD domain C3E78_10310 PF00152 tRNA synthetases class II (D, K and N) C3E78_10310 PF01336 OB-fold nucleic acid binding domain C3E78_10315 PF03129 Anticodon binding domain C3E78_10315 PF13393 Histidyl-tRNA synthetase C3E78_10320 PF00753 Metallo-beta-lactamase superfamily C3E78_10325 PF03993 Domain of Unknown Function (DUF349) C3E78_10335 PF13291 ACT domain C3E78_10335 PF04607 Region found in RelA / SpoT proteins C3E78_10335 PF02824 TGS domain C3E78_10340 PF00156 Phosphoribosyl transferase domain C3E78_10345 PF07549 SecD/SecF GG Motif C3E78_10345 PF02355 Protein export membrane protein C3E78_10350 PF07549 SecD/SecF GG Motif C3E78_10350 PF02355 Protein export membrane protein C3E78_10355 PF02699 Preprotein translocase subunit C3E78_10360 PF17864 RuvB AAA lid domain C3E78_10360 PF05491 RuvB C-terminal winged helix domain C3E78_10360 PF05496 Holliday junction DNA helicase RuvB P-loop domain C3E78_10365 PF07499 RuvA, C-terminal domain C3E78_10365 PF01330 RuvA N terminal domain C3E78_10370 PF02075 Crossover junction endodeoxyribonuclease RuvC C3E78_10375 PF01709 Transcriptional regulator C3E78_10380 PF01174 SNO glutamine amidotransferase family C3E78_10385 PF01680 SOR/SNZ family C3E78_10390 PF00037 4Fe-4S binding domain C3E78_10390 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_10395 PF11583 P-aminobenzoate N-oxygenase AurF C3E78_10400 PF01740 STAS domain C3E78_10400 PF00916 Sulfate permease family C3E78_10405 PF13411 MerR HTH family regulatory protein C3E78_10410 PF01066 CDP-alcohol phosphatidyltransferase C3E78_10415 PF01230 HIT domain C3E78_10420 PF03129 Anticodon binding domain C3E78_10420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3E78_10420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3E78_10425 PF00196 Bacterial regulatory proteins, luxR family C3E78_10425 PF00072 Response regulator receiver domain C3E78_10435 PF05199 GMC oxidoreductase C3E78_10445 PF00743 Flavin-binding monooxygenase-like C3E78_10465 PF00005 ABC transporter C3E78_10465 PF13732 Domain of unknown function (DUF4162) C3E78_10480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3E78_10490 PF00069 Protein kinase domain C3E78_10495 PF00561 alpha/beta hydrolase fold C3E78_10510 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_10510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3E78_10530 PF00196 Bacterial regulatory proteins, luxR family C3E78_10540 PF01063 Amino-transferase class IV C3E78_10575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_10575 PF18158 Adaptive response protein AidB N-terminal domain C3E78_10575 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_10585 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C3E78_10585 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C3E78_10605 PF05145 Transition state regulatory protein AbrB C3E78_10610 PF03976 Polyphosphate kinase 2 (PPK2) C3E78_10615 PF00196 Bacterial regulatory proteins, luxR family C3E78_10615 PF00072 Response regulator receiver domain C3E78_10630 PF01641 SelR domain C3E78_10635 PF06778 Chlorite dismutase C3E78_10640 PF01593 Flavin containing amine oxidoreductase C3E78_10645 PF01208 Uroporphyrinogen decarboxylase (URO-D) C3E78_10660 PF03239 Iron permease FTR1 family C3E78_10670 PF00248 Aldo/keto reductase family C3E78_10680 PF02355 Protein export membrane protein C3E78_10680 PF07549 SecD/SecF GG Motif C3E78_10715 PF00291 Pyridoxal-phosphate dependent enzyme C3E78_10715 PF00571 CBS domain C3E78_10720 PF01053 Cys/Met metabolism PLP-dependent enzyme C3E78_10730 PF02525 Flavodoxin-like fold C3E78_10745 PF01702 Queuine tRNA-ribosyltransferase C3E78_10755 PF01494 FAD binding domain C3E78_10765 PF00890 FAD binding domain C3E78_10770 PF00248 Aldo/keto reductase family C3E78_10775 PF00563 EAL domain C3E78_10775 PF00990 Diguanylate cyclase, GGDEF domain C3E78_10775 PF03707 Bacterial signalling protein N terminal repeat C3E78_10795 PF07690 Major Facilitator Superfamily C3E78_10800 PF05547 Immune inhibitor A peptidase M6 C3E78_10800 PF00801 PKD domain C3E78_10810 PF00313 'Cold-shock' DNA-binding domain C3E78_10815 PF07995 Glucose / Sorbosone dehydrogenase C3E78_10825 PF00085 Thioredoxin C3E78_10865 PF00176 SNF2 family N-terminal domain C3E78_10865 PF00271 Helicase conserved C-terminal domain C3E78_10865 PF12419 SNF2 Helicase protein C3E78_10885 PF13344 Haloacid dehalogenase-like hydrolase C3E78_10885 PF00293 NUDIX domain C3E78_10895 PF03747 ADP-ribosylglycohydrolase C3E78_10910 PF03793 PASTA domain C3E78_10910 PF00069 Protein kinase domain C3E78_10930 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_10930 PF00107 Zinc-binding dehydrogenase C3E78_10940 PF12419 SNF2 Helicase protein C3E78_10940 PF00271 Helicase conserved C-terminal domain C3E78_10940 PF00176 SNF2 family N-terminal domain C3E78_10945 PF00106 short chain dehydrogenase C3E78_10955 PF13538 UvrD-like helicase C-terminal domain C3E78_10960 PF00580 UvrD/REP helicase N-terminal domain C3E78_10960 PF13361 UvrD-like helicase C-terminal domain C3E78_10960 PF12705 PD-(D/E)XK nuclease superfamily C3E78_10965 PF17946 RecC C-terminal domain C3E78_10985 PF00296 Luciferase-like monooxygenase C3E78_10990 PF00571 CBS domain C3E78_10990 PF01595 Cyclin M transmembrane N-terminal domain C3E78_10995 PF00571 CBS domain C3E78_10995 PF03471 Transporter associated domain C3E78_10995 PF01595 Cyclin M transmembrane N-terminal domain C3E78_11000 PF08471 Class II vitamin B12-dependent ribonucleotide reductase C3E78_11000 PF02867 Ribonucleotide reductase, barrel domain C3E78_11005 PF03477 ATP cone domain C3E78_11015 PF04226 Transglycosylase associated protein C3E78_11020 PF00210 Ferritin-like domain C3E78_11030 PF00958 GMP synthase C terminal domain C3E78_11030 PF02540 NAD synthase C3E78_11030 PF00117 Glutamine amidotransferase class-I C3E78_11040 PF03631 Virulence factor BrkB C3E78_11045 PF00106 short chain dehydrogenase C3E78_11050 PF01726 LexA DNA binding domain C3E78_11050 PF00717 Peptidase S24-like C3E78_11055 PF01370 NAD dependent epimerase/dehydratase family C3E78_11070 PF13307 Helicase C-terminal domain C3E78_11075 PF16360 GTP-binding GTPase Middle Region C3E78_11075 PF13167 GTP-binding GTPase N-terminal C3E78_11075 PF01926 50S ribosome-binding GTPase C3E78_11080 PF01678 Diaminopimelate epimerase C3E78_11105 PF00440 Bacterial regulatory proteins, tetR family C3E78_11110 PF03176 MMPL family C3E78_11125 PF04055 Radical SAM superfamily C3E78_11125 PF00919 Uncharacterized protein family UPF0004 C3E78_11170 PF00942 Cellulose binding domain C3E78_11170 PF03442 Carbohydrate binding domain X2 C3E78_11185 PF02631 RecX family C3E78_11190 PF00154 recA bacterial DNA recombination protein C3E78_11195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3E78_11195 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C3E78_11200 PF00356 Bacterial regulatory proteins, lacI family C3E78_11205 PF00232 Glycosyl hydrolase family 1 C3E78_11210 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_11215 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_11225 PF00005 ABC transporter C3E78_11225 PF17912 MalK OB fold domain C3E78_11240 PF00994 Probable molybdopterin binding domain C3E78_11240 PF18146 Damage-inducible protein CinA KH domain C3E78_11240 PF02464 Competence-damaged protein C3E78_11245 PF01066 CDP-alcohol phosphatidyltransferase C3E78_11255 PF17854 FtsK alpha domain C3E78_11255 PF09397 Ftsk gamma domain C3E78_11255 PF01580 FtsK/SpoIIIE family C3E78_11265 PF00994 Probable molybdopterin binding domain C3E78_11265 PF03454 MoeA C-terminal region (domain IV) C3E78_11265 PF03453 MoeA N-terminal region (domain I and II) C3E78_11275 PF12804 MobA-like NTP transferase domain C3E78_11280 PF17770 Ribonuclease J C-terminal domain C3E78_11280 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C3E78_11280 PF12706 Beta-lactamase superfamily domain C3E78_11285 PF00701 Dihydrodipicolinate synthetase family C3E78_11310 PF00186 Dihydrofolate reductase C3E78_11315 PF00303 Thymidylate synthase C3E78_11340 PF05173 Dihydrodipicolinate reductase, C-terminus C3E78_11340 PF01113 Dihydrodipicolinate reductase, N-terminus C3E78_11350 PF00266 Aminotransferase class-V C3E78_11360 PF00312 Ribosomal protein S15 C3E78_11370 PF06574 FAD synthetase C3E78_11370 PF01687 Riboflavin kinase C3E78_11380 PF00512 His Kinase A (phospho-acceptor) domain C3E78_11380 PF18719 ArlS sensor domain C3E78_11380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_11385 PF00072 Response regulator receiver domain C3E78_11385 PF00486 Transcriptional regulatory protein, C terminal C3E78_11390 PF03793 PASTA domain C3E78_11390 PF00069 Protein kinase domain C3E78_11400 PF13091 PLD-like domain C3E78_11405 PF09142 tRNA Pseudouridine synthase II, C terminal C3E78_11405 PF16198 tRNA pseudouridylate synthase B C-terminal domain C3E78_11405 PF01509 TruB family pseudouridylate synthase (N terminal domain) C3E78_11410 PF02033 Ribosome-binding factor A C3E78_11415 PF00009 Elongation factor Tu GTP binding domain C3E78_11415 PF04760 Translation initiation factor IF-2, N-terminal region C3E78_11415 PF11987 Translation-initiation factor 2 C3E78_11425 PF08529 NusA N-terminal domain C3E78_11425 PF13184 NusA-like KH domain C3E78_11430 PF02576 RimP N-terminal domain C3E78_11430 PF17384 RimP C-terminal SH3 domain C3E78_11445 PF03129 Anticodon binding domain C3E78_11445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3E78_11445 PF04073 Aminoacyl-tRNA editing domain C3E78_11465 PF04551 GcpE protein C3E78_11470 PF17820 PDZ domain C3E78_11470 PF02163 Peptidase family M50 C3E78_11475 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C3E78_11475 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C3E78_11475 PF13288 DXP reductoisomerase C-terminal domain C3E78_11485 PF00005 ABC transporter C3E78_11490 PF07730 Histidine kinase C3E78_11495 PF00196 Bacterial regulatory proteins, luxR family C3E78_11495 PF00072 Response regulator receiver domain C3E78_11515 PF00202 Aminotransferase class-III C3E78_11520 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_11525 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_11530 PF08402 TOBE domain C3E78_11530 PF00005 ABC transporter C3E78_11550 PF00378 Enoyl-CoA hydratase/isomerase C3E78_11560 PF04055 Radical SAM superfamily C3E78_11565 PF15887 Putative zinc-binding metallo-peptidase C3E78_11565 PF10005 zinc-ribbon domain C3E78_11570 PF08379 Bacterial transglutaminase-like N-terminal region C3E78_11570 PF01841 Transglutaminase-like superfamily C3E78_11575 PF04168 A predicted alpha-helical domain with a conserved ER motif. C3E78_11575 PF14403 Circularly permuted ATP-grasp type 2 C3E78_11590 PF01765 Ribosome recycling factor C3E78_11595 PF00696 Amino acid kinase family C3E78_11600 PF00889 Elongation factor TS C3E78_11605 PF00318 Ribosomal protein S2 C3E78_11610 PF01551 Peptidase family M23 C3E78_11610 PF10145 Phage-related minor tail protein C3E78_11610 PF01464 Transglycosylase SLT domain C3E78_11615 PF00962 Adenosine/AMP deaminase C3E78_11620 PF02899 Phage integrase, N-terminal SAM-like domain C3E78_11620 PF00589 Phage integrase family C3E78_11625 PF02481 DNA recombination-mediator protein A C3E78_11625 PF17782 DprA winged helix domain C3E78_11630 PF13335 Magnesium chelatase, subunit ChlI C-terminal C3E78_11630 PF01078 Magnesium chelatase, subunit ChlI C3E78_11635 PF02021 Uncharacterised protein family UPF0102 C3E78_11640 PF02654 Cobalamin-5-phosphate synthase C3E78_11645 PF10611 Protein of unknown function (DUF2469) C3E78_11650 PF01351 Ribonuclease HII C3E78_11655 PF10502 Signal peptidase, peptidase S26 C3E78_11660 PF10502 Signal peptidase, peptidase S26 C3E78_11665 PF01245 Ribosomal protein L19 C3E78_11670 PF00909 Ammonium Transporter Family C3E78_11675 PF01746 tRNA (Guanine-1)-methyltransferase C3E78_11680 PF05239 PRC-barrel domain C3E78_11680 PF01782 RimM N-terminal domain C3E78_11690 PF00886 Ribosomal protein S16 C3E78_11695 PF04116 Fatty acid hydroxylase superfamily C3E78_11705 PF03960 ArsC family C3E78_11710 PF00005 ABC transporter C3E78_11710 PF00664 ABC transporter transmembrane region C3E78_11715 PF00664 ABC transporter transmembrane region C3E78_11715 PF00005 ABC transporter C3E78_11720 PF02447 GntP family permease C3E78_11730 PF00448 SRP54-type protein, GTPase domain C3E78_11730 PF02881 SRP54-type protein, helical bundle domain C3E78_11730 PF02978 Signal peptide binding domain C3E78_11735 PF08335 GlnD PII-uridylyltransferase C3E78_11735 PF01966 HD domain C3E78_11735 PF01909 Nucleotidyltransferase domain C3E78_11740 PF00543 Nitrogen regulatory protein P-II C3E78_11745 PF00909 Ammonium Transporter Family C3E78_11750 PF02881 SRP54-type protein, helical bundle domain C3E78_11750 PF00448 SRP54-type protein, GTPase domain C3E78_11755 PF00005 ABC transporter C3E78_11755 PF00664 ABC transporter transmembrane region C3E78_11760 PF00664 ABC transporter transmembrane region C3E78_11760 PF00005 ABC transporter C3E78_11765 PF02322 Cytochrome bd terminal oxidase subunit II C3E78_11770 PF01654 Cytochrome bd terminal oxidase subunit I C3E78_11775 PF03965 Penicillinase repressor C3E78_11795 PF06470 SMC proteins Flexible Hinge Domain C3E78_11795 PF02463 RecF/RecN/SMC N terminal domain C3E78_11815 PF00860 Permease family C3E78_11820 PF01207 Dihydrouridine synthase (Dus) C3E78_11830 PF03129 Anticodon binding domain C3E78_11830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3E78_11840 PF00005 ABC transporter C3E78_11845 PF00950 ABC 3 transport family C3E78_11850 PF01475 Ferric uptake regulator family C3E78_11895 PF13673 Acetyltransferase (GNAT) domain C3E78_11905 PF00682 HMGL-like C3E78_11905 PF08502 LeuA allosteric (dimerisation) domain C3E78_11915 PF00206 Lyase C3E78_11915 PF10415 Fumarase C C-terminus C3E78_11920 PF01063 Amino-transferase class IV C3E78_11925 PF00180 Isocitrate/isopropylmalate dehydrogenase C3E78_11955 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C3E78_11955 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C3E78_11960 PF10369 Small subunit of acetolactate synthase C3E78_11965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3E78_11965 PF00205 Thiamine pyrophosphate enzyme, central domain C3E78_11965 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3E78_11975 PF00106 short chain dehydrogenase C3E78_11990 PF00920 Dehydratase family C3E78_12020 PF00561 alpha/beta hydrolase fold C3E78_12030 PF00072 Response regulator receiver domain C3E78_12030 PF00990 Diguanylate cyclase, GGDEF domain C3E78_12035 PF02637 GatB domain C3E78_12035 PF02934 GatB/GatE catalytic domain C3E78_12040 PF01425 Amidase C3E78_12045 PF02686 Glu-tRNAGln amidotransferase C subunit C3E78_12050 PF00561 alpha/beta hydrolase fold C3E78_12055 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_12065 PF00849 RNA pseudouridylate synthase C3E78_12070 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_12075 PF00533 BRCA1 C Terminus (BRCT) domain C3E78_12075 PF01653 NAD-dependent DNA ligase adenylation domain C3E78_12075 PF03120 NAD-dependent DNA ligase OB-fold domain C3E78_12075 PF12826 Helix-hairpin-helix motif C3E78_12075 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C3E78_12090 PF00266 Aminotransferase class-V C3E78_12095 PF00266 Aminotransferase class-V C3E78_12100 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C3E78_12100 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C3E78_12105 PF00890 FAD binding domain C3E78_12105 PF02910 Fumarate reductase flavoprotein C-term C3E78_12110 PF02445 Quinolinate synthetase A protein C3E78_12120 PF04679 ATP dependent DNA ligase C terminal region C3E78_12120 PF01068 ATP dependent DNA ligase domain C3E78_12120 PF04675 DNA ligase N terminus C3E78_12125 PF03471 Transporter associated domain C3E78_12125 PF00999 Sodium/hydrogen exchanger family C3E78_12125 PF02080 TrkA-C domain C3E78_12135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_12135 PF07730 Histidine kinase C3E78_12135 PF05231 MASE1 C3E78_12140 PF00072 Response regulator receiver domain C3E78_12140 PF00196 Bacterial regulatory proteins, luxR family C3E78_12150 PF07733 Bacterial DNA polymerase III alpha NTPase domain C3E78_12150 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C3E78_12150 PF14579 Helix-hairpin-helix motif C3E78_12150 PF02811 PHP domain C3E78_12165 PF00005 ABC transporter C3E78_12165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3E78_12170 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_12170 PF12911 N-terminal TM domain of oligopeptide transport permease C C3E78_12175 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_12180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3E78_12185 PF01012 Electron transfer flavoprotein domain C3E78_12185 PF00766 Electron transfer flavoprotein FAD-binding domain C3E78_12190 PF01012 Electron transfer flavoprotein domain C3E78_12210 PF08241 Methyltransferase domain C3E78_12225 PF00128 Alpha amylase, catalytic domain C3E78_12225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C3E78_12225 PF02806 Alpha amylase, C-terminal all-beta domain C3E78_12230 PF18085 Maltokinase N-terminal cap domain C3E78_12230 PF01636 Phosphotransferase enzyme family C3E78_12235 PF00128 Alpha amylase, catalytic domain C3E78_12235 PF16657 Maltogenic Amylase, C-terminal domain C3E78_12240 PF00128 Alpha amylase, catalytic domain C3E78_12240 PF11896 Domain of unknown function (DUF3416) C3E78_12250 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C3E78_12250 PF00128 Alpha amylase, catalytic domain C3E78_12275 PF11941 Domain of unknown function (DUF3459) C3E78_12275 PF00128 Alpha amylase, catalytic domain C3E78_12280 PF00128 Alpha amylase, catalytic domain C3E78_12285 PF00128 Alpha amylase, catalytic domain C3E78_12285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C3E78_12290 PF02446 4-alpha-glucanotransferase C3E78_12300 PF00378 Enoyl-CoA hydratase/isomerase C3E78_12325 PF00293 NUDIX domain C3E78_12355 PF02803 Thiolase, C-terminal domain C3E78_12355 PF00108 Thiolase, N-terminal domain C3E78_12365 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_12365 PF00107 Zinc-binding dehydrogenase C3E78_12385 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C3E78_12385 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C3E78_12395 PF01939 Endonuclease NucS C3E78_12400 PF00210 Ferritin-like domain C3E78_12405 PF02310 B12 binding domain C3E78_12405 PF01642 Methylmalonyl-CoA mutase C3E78_12410 PF01923 Cobalamin adenosyltransferase C3E78_12425 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C3E78_12430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3E78_12430 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3E78_12435 PF00231 ATP synthase C3E78_12440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3E78_12440 PF00306 ATP synthase alpha/beta chain, C terminal domain C3E78_12440 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3E78_12445 PF00213 ATP synthase delta (OSCP) subunit C3E78_12450 PF00430 ATP synthase B/B' CF(0) C3E78_12455 PF00137 ATP synthase subunit C C3E78_12460 PF00119 ATP synthase A chain C3E78_12470 PF00953 Glycosyl transferase family 4 C3E78_12475 PF01300 Telomere recombination C3E78_12485 PF17827 PrmC N-terminal domain C3E78_12485 PF13649 Methyltransferase domain C3E78_12490 PF00472 RF-1 domain C3E78_12490 PF03462 PCRF domain C3E78_12495 PF01197 Ribosomal protein L31 C3E78_12500 PF00255 Glutathione peroxidase C3E78_12505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3E78_12505 PF07498 Rho termination factor, N-terminal domain C3E78_12505 PF07497 Rho termination factor, RNA-binding domain C3E78_12510 PF08544 GHMP kinases C terminal C3E78_12510 PF00288 GHMP kinases N terminal domain C3E78_12515 PF00291 Pyridoxal-phosphate dependent enzyme C3E78_12520 PF03447 Homoserine dehydrogenase, NAD binding domain C3E78_12520 PF00742 Homoserine dehydrogenase C3E78_12520 PF01842 ACT domain C3E78_12545 PF00376 MerR family regulatory protein C3E78_12545 PF09278 MerR, DNA binding C3E78_12550 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C3E78_12550 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C3E78_12555 PF03485 Arginyl tRNA synthetase N terminal domain C3E78_12555 PF05746 DALR anticodon binding domain C3E78_12555 PF00750 tRNA synthetases class I (R) C3E78_12560 PF00072 Response regulator receiver domain C3E78_12560 PF01627 Hpt domain C3E78_12560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_12560 PF01584 CheW-like domain C3E78_12560 PF02895 Signal transducing histidine kinase, homodimeric domain C3E78_12595 PF02839 Carbohydrate binding domain C3E78_12605 PF16870 2-oxoglutarate dehydrogenase C-terminal C3E78_12605 PF02779 Transketolase, pyrimidine binding domain C3E78_12605 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3E78_12605 PF16078 2-oxoglutarate dehydrogenase N-terminus C3E78_12605 PF00676 Dehydrogenase E1 component C3E78_12610 PF00107 Zinc-binding dehydrogenase C3E78_12610 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_12615 PF00390 Malic enzyme, N-terminal domain C3E78_12615 PF03949 Malic enzyme, NAD binding domain C3E78_12625 PF02467 Transcription factor WhiB C3E78_12630 PF12282 Signal transduction histidine kinase C3E78_12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_12630 PF07568 Histidine kinase C3E78_12640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3E78_12640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3E78_12640 PF00205 Thiamine pyrophosphate enzyme, central domain C3E78_12650 PF00664 ABC transporter transmembrane region C3E78_12650 PF00005 ABC transporter C3E78_12655 PF00664 ABC transporter transmembrane region C3E78_12655 PF00005 ABC transporter C3E78_12690 PF00437 Type II/IV secretion system protein C3E78_12710 PF04978 Protein of unknown function (DUF664) C3E78_12720 PF00072 Response regulator receiver domain C3E78_12720 PF00486 Transcriptional regulatory protein, C terminal C3E78_12725 PF00512 His Kinase A (phospho-acceptor) domain C3E78_12725 PF00672 HAMP domain C3E78_12725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_12730 PF04012 PspA/IM30 family C3E78_12745 PF06974 Protein of unknown function (DUF1298) C3E78_12745 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain C3E78_12780 PF02810 SEC-C motif C3E78_12780 PF07517 SecA DEAD-like domain C3E78_12780 PF01043 SecA preprotein cross-linking domain C3E78_12780 PF07516 SecA Wing and Scaffold domain C3E78_12785 PF06224 Winged helix DNA-binding domain C3E78_12790 PF00072 Response regulator receiver domain C3E78_12790 PF00196 Bacterial regulatory proteins, luxR family C3E78_12795 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C3E78_12795 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus C3E78_12800 PF00156 Phosphoribosyl transferase domain C3E78_12810 PF00672 HAMP domain C3E78_12810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_12810 PF00512 His Kinase A (phospho-acceptor) domain C3E78_12815 PF00072 Response regulator receiver domain C3E78_12815 PF00486 Transcriptional regulatory protein, C terminal C3E78_12820 PF05221 S-adenosyl-L-homocysteine hydrolase C3E78_12820 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C3E78_12840 PF00474 Sodium:solute symporter family C3E78_12845 PF03966 Trm112p-like protein C3E78_12850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3E78_12850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3E78_12850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3E78_12850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3E78_12875 PF02467 Transcription factor WhiB C3E78_12880 PF01933 Uncharacterised protein family UPF0052 C3E78_12895 PF00005 ABC transporter C3E78_12895 PF01476 LysM domain C3E78_12900 PF03816 Cell envelope-related transcriptional attenuator domain C3E78_12910 PF03816 Cell envelope-related transcriptional attenuator domain C3E78_12915 PF14602 Hexapeptide repeat of succinyl-transferase C3E78_12915 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle C3E78_12940 PF00155 Aminotransferase class I and II C3E78_12945 PF00037 4Fe-4S binding domain C3E78_12960 PF01613 Flavin reductase like domain C3E78_12970 PF02585 GlcNAc-PI de-N-acetylase C3E78_12980 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region C3E78_12980 PF00326 Prolyl oligopeptidase family C3E78_12990 PF04030 D-arabinono-1,4-lactone oxidase C3E78_12990 PF01565 FAD binding domain C3E78_12995 PF01758 Sodium Bile acid symporter family C3E78_13020 PF04434 SWIM zinc finger C3E78_13020 PF00176 SNF2 family N-terminal domain C3E78_13020 PF00271 Helicase conserved C-terminal domain C3E78_13030 PF00075 RNase H C3E78_13040 PF00440 Bacterial regulatory proteins, tetR family C3E78_13040 PF08361 MAATS-type transcriptional repressor, C-terminal region C3E78_13050 PF07690 Major Facilitator Superfamily C3E78_13070 PF13419 Haloacid dehalogenase-like hydrolase C3E78_13090 PF00005 ABC transporter C3E78_13095 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_13100 PF00107 Zinc-binding dehydrogenase C3E78_13100 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_13110 PF00440 Bacterial regulatory proteins, tetR family C3E78_13115 PF00106 short chain dehydrogenase C3E78_13130 PF06071 Protein of unknown function (DUF933) C3E78_13130 PF01926 50S ribosome-binding GTPase C3E78_13140 PF03992 Antibiotic biosynthesis monooxygenase C3E78_13145 PF02646 RmuC family C3E78_13155 PF00999 Sodium/hydrogen exchanger family C3E78_13165 PF02401 LytB protein C3E78_13175 PF02601 Exonuclease VII, large subunit C3E78_13175 PF13742 OB-fold nucleic acid binding domain C3E78_13180 PF02609 Exonuclease VII small subunit C3E78_13190 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C3E78_13195 PF00561 alpha/beta hydrolase fold C3E78_13200 PF04299 Putative FMN-binding domain C3E78_13215 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_13220 PF00005 ABC transporter C3E78_13220 PF03459 TOBE domain C3E78_13235 PF10415 Fumarase C C-terminus C3E78_13235 PF00206 Lyase C3E78_13245 PF17912 MalK OB fold domain C3E78_13245 PF00005 ABC transporter C3E78_13255 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_13265 PF02562 PhoH-like protein C3E78_13265 PF13638 PIN domain C3E78_13270 PF01255 Putative undecaprenyl diphosphate synthase C3E78_13275 PF03006 Haemolysin-III related C3E78_13280 PF03190 Protein of unknown function, DUF255 C3E78_13305 PF02585 GlcNAc-PI de-N-acetylase C3E78_13315 PF01272 Transcription elongation factor, GreA/GreB, C-term C3E78_13315 PF03449 Transcription elongation factor, N-terminal C3E78_13320 PF13291 ACT domain C3E78_13320 PF00291 Pyridoxal-phosphate dependent enzyme C3E78_13335 PF00440 Bacterial regulatory proteins, tetR family C3E78_13350 PF00403 Heavy-metal-associated domain C3E78_13350 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_13350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3E78_13360 PF07690 Major Facilitator Superfamily C3E78_13365 PF01047 MarR family C3E78_13370 PF02687 FtsX-like permease family C3E78_13375 PF00005 ABC transporter C3E78_13390 PF07690 Major Facilitator Superfamily C3E78_13395 PF02665 Nitrate reductase gamma subunit C3E78_13395 PF02613 Nitrate reductase delta subunit C3E78_13395 PF00384 Molybdopterin oxidoreductase C3E78_13400 PF02613 Nitrate reductase delta subunit C3E78_13405 PF14711 Respiratory nitrate reductase beta C-terminal C3E78_13405 PF13247 4Fe-4S dicluster domain C3E78_13410 PF01568 Molydopterin dinucleotide binding domain C3E78_13410 PF00384 Molybdopterin oxidoreductase C3E78_13420 PF02567 Phenazine biosynthesis-like protein C3E78_13425 PF01593 Flavin containing amine oxidoreductase C3E78_13440 PF12680 SnoaL-like domain C3E78_13470 PF04960 Glutaminase C3E78_13480 PF03793 PASTA domain C3E78_13480 PF00069 Protein kinase domain C3E78_13510 PF00291 Pyridoxal-phosphate dependent enzyme C3E78_13510 PF00585 C-terminal regulatory domain of Threonine dehydratase C3E78_13515 PF03699 Uncharacterised protein family (UPF0182) C3E78_13525 PF05362 Lon protease (S16) C-terminal proteolytic domain C3E78_13525 PF13180 PDZ domain C3E78_13530 PF02391 MoaE protein C3E78_13555 PF03109 ABC1 family C3E78_13560 PF00580 UvrD/REP helicase N-terminal domain C3E78_13560 PF00570 HRDC domain C3E78_13560 PF13361 UvrD-like helicase C-terminal domain C3E78_13565 PF00462 Glutaredoxin C3E78_13570 PF09297 NADH pyrophosphatase zinc ribbon domain C3E78_13570 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C3E78_13570 PF00293 NUDIX domain C3E78_13575 PF00580 UvrD/REP helicase N-terminal domain C3E78_13575 PF13361 UvrD-like helicase C-terminal domain C3E78_13580 PF13361 UvrD-like helicase C-terminal domain C3E78_13580 PF00580 UvrD/REP helicase N-terminal domain C3E78_13590 PF00899 ThiF family C3E78_13590 PF00581 Rhodanese-like domain C3E78_13595 PF00440 Bacterial regulatory proteins, tetR family C3E78_13610 PF00271 Helicase conserved C-terminal domain C3E78_13610 PF00270 DEAD/DEAH box helicase C3E78_13620 PF13614 AAA domain C3E78_13625 PF00106 short chain dehydrogenase C3E78_13635 PF00174 Oxidoreductase molybdopterin binding domain C3E78_13640 PF00970 Oxidoreductase FAD-binding domain C3E78_13640 PF00175 Oxidoreductase NAD-binding domain C3E78_13640 PF00111 2Fe-2S iron-sulfur cluster binding domain C3E78_13665 PF07690 Major Facilitator Superfamily C3E78_13675 PF00355 Rieske [2Fe-2S] domain C3E78_13680 PF14759 Reductase C-terminal C3E78_13680 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_13685 PF00171 Aldehyde dehydrogenase family C3E78_13710 PF17853 GGDEF-like domain C3E78_13710 PF07905 Purine catabolism regulatory protein-like family C3E78_13710 PF13556 PucR C-terminal helix-turn-helix domain C3E78_13725 PF00300 Histidine phosphatase superfamily (branch 1) C3E78_13730 PF01575 MaoC like domain C3E78_13740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_13740 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_13740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_13750 PF08338 Domain of unknown function (DUF1731) C3E78_13750 PF01370 NAD dependent epimerase/dehydratase family C3E78_13755 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain C3E78_13755 PF06974 Protein of unknown function (DUF1298) C3E78_13760 PF07859 alpha/beta hydrolase fold C3E78_13770 PF01568 Molydopterin dinucleotide binding domain C3E78_13770 PF00384 Molybdopterin oxidoreductase C3E78_13780 PF01425 Amidase C3E78_13790 PF17926 Tetracyclin repressor-like, C-terminal domain C3E78_13790 PF00440 Bacterial regulatory proteins, tetR family C3E78_13795 PF00107 Zinc-binding dehydrogenase C3E78_13795 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_13800 PF01769 Divalent cation transporter C3E78_13800 PF03448 MgtE intracellular N domain C3E78_13800 PF00571 CBS domain C3E78_13815 PF12848 ABC transporter C3E78_13815 PF00005 ABC transporter C3E78_13820 PF01883 Iron-sulfur cluster assembly protein C3E78_13820 PF10609 NUBPL iron-transfer P-loop NTPase C3E78_13825 PF02416 mttA/Hcf106 family C3E78_13835 PF08281 Sigma-70, region 4 C3E78_13835 PF04542 Sigma-70 region 2 C3E78_13840 PF01596 O-methyltransferase C3E78_13855 PF00378 Enoyl-CoA hydratase/isomerase C3E78_13865 PF03352 Methyladenine glycosylase C3E78_13865 PF00117 Glutamine amidotransferase class-I C3E78_13865 PF13302 Acetyltransferase (GNAT) domain C3E78_13865 PF00958 GMP synthase C terminal domain C3E78_13865 PF13673 Acetyltransferase (GNAT) domain C3E78_13870 PF03641 Possible lysine decarboxylase C3E78_13875 PF07687 Peptidase dimerisation domain C3E78_13875 PF01546 Peptidase family M20/M25/M40 C3E78_13885 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase C3E78_13900 PF00731 AIR carboxylase C3E78_13905 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C3E78_13905 PF02222 ATP-grasp domain C3E78_13910 PF16701 Adenylate cyclase regulatory domain C3E78_13910 PF00211 Adenylate and Guanylate cyclase catalytic domain C3E78_13920 PF02237 Biotin protein ligase C terminal domain C3E78_13920 PF03099 Biotin/lipoate A/B protein ligase family C3E78_13920 PF08279 HTH domain C3E78_13925 PF01039 Carboxyl transferase domain C3E78_13940 PF02545 Maf-like protein C3E78_13945 PF13361 UvrD-like helicase C-terminal domain C3E78_13945 PF00580 UvrD/REP helicase N-terminal domain C3E78_13950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_13950 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_13950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_13955 PF02785 Biotin carboxylase C-terminal domain C3E78_13955 PF00289 Biotin carboxylase, N-terminal domain C3E78_13955 PF00364 Biotin-requiring enzyme C3E78_13955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3E78_13970 PF08486 Stage II sporulation protein C3E78_13975 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_13975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3E78_13980 PF01126 Heme oxygenase C3E78_13985 PF01048 Phosphorylase superfamily C3E78_13995 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3E78_13995 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3E78_13995 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3E78_13995 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3E78_14015 PF02872 5'-nucleotidase, C-terminal domain C3E78_14015 PF00746 LPXTG cell wall anchor motif C3E78_14015 PF00149 Calcineurin-like phosphoesterase C3E78_14015 PF00565 Staphylococcal nuclease homologue C3E78_14020 PF01791 DeoC/LacD family aldolase C3E78_14035 PF16197 Ketoacyl-synthetase C-terminal extension C3E78_14035 PF02801 Beta-ketoacyl synthase, C-terminal domain C3E78_14035 PF08659 KR domain C3E78_14035 PF00550 Phosphopantetheine attachment site C3E78_14035 PF14765 Polyketide synthase dehydratase C3E78_14035 PF00109 Beta-ketoacyl synthase, N-terminal domain C3E78_14035 PF00698 Acyl transferase domain C3E78_14035 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_14045 PF00378 Enoyl-CoA hydratase/isomerase C3E78_14050 PF00743 Flavin-binding monooxygenase-like C3E78_14065 PF00106 short chain dehydrogenase C3E78_14070 PF00378 Enoyl-CoA hydratase/isomerase C3E78_14075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_14075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_14075 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_14080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_14080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_14080 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_14085 PF13380 CoA binding domain C3E78_14085 PF13607 Succinyl-CoA ligase like flavodoxin domain C3E78_14085 PF00583 Acetyltransferase (GNAT) family C3E78_14090 PF00106 short chain dehydrogenase C3E78_14095 PF00005 ABC transporter C3E78_14100 PF00005 ABC transporter C3E78_14100 PF12399 Branched-chain amino acid ATP-binding cassette transporter C3E78_14110 PF13458 Periplasmic binding protein C3E78_14115 PF01361 Tautomerase enzyme C3E78_14120 PF00392 Bacterial regulatory proteins, gntR family C3E78_14120 PF07702 UTRA domain C3E78_14125 PF02190 ATP-dependent protease La (LON) substrate-binding domain C3E78_14125 PF00004 ATPase family associated with various cellular activities (AAA) C3E78_14125 PF05362 Lon protease (S16) C-terminal proteolytic domain C3E78_14130 PF00962 Adenosine/AMP deaminase C3E78_14135 PF01575 MaoC like domain C3E78_14140 PF02885 Glycosyl transferase family, helical bundle domain C3E78_14140 PF00591 Glycosyl transferase family, a/b domain C3E78_14140 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C3E78_14145 PF00067 Cytochrome P450 C3E78_14150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3E78_14155 PF02653 Branched-chain amino acid transport system / permease component C3E78_14160 PF02653 Branched-chain amino acid transport system / permease component C3E78_14165 PF00005 ABC transporter C3E78_14170 PF02608 ABC transporter substrate-binding protein PnrA-like C3E78_14175 PF04107 Glutamate-cysteine ligase family 2(GCS2) C3E78_14175 PF01546 Peptidase family M20/M25/M40 C3E78_14185 PF01047 MarR family C3E78_14190 PF13183 4Fe-4S dicluster domain C3E78_14190 PF13085 2Fe-2S iron-sulfur cluster binding domain C3E78_14195 PF00890 FAD binding domain C3E78_14195 PF02910 Fumarate reductase flavoprotein C-term C3E78_14205 PF03466 LysR substrate binding domain C3E78_14205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3E78_14215 PF00579 tRNA synthetases class I (W and Y) C3E78_14220 PF08544 GHMP kinases C terminal C3E78_14220 PF10509 Galactokinase galactose-binding signature C3E78_14220 PF00288 GHMP kinases N terminal domain C3E78_14225 PF01817 Chorismate mutase type II C3E78_14225 PF00800 Prephenate dehydratase C3E78_14240 PF07690 Major Facilitator Superfamily C3E78_14245 PF00551 Formyl transferase C3E78_14245 PF01842 ACT domain C3E78_14255 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_14260 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_14265 PF12857 TOBE-like domain C3E78_14265 PF00005 ABC transporter C3E78_14270 PF07690 Major Facilitator Superfamily C3E78_14280 PF03971 Monomeric isocitrate dehydrogenase C3E78_14285 PF00056 lactate/malate dehydrogenase, NAD binding domain C3E78_14285 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C3E78_14295 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C3E78_14295 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C3E78_14310 PF02142 MGS-like domain C3E78_14310 PF01808 AICARFT/IMPCHase bienzyme C3E78_14315 PF00551 Formyl transferase C3E78_14330 PF02629 CoA binding domain C3E78_14330 PF00549 CoA-ligase C3E78_14335 PF00549 CoA-ligase C3E78_14335 PF08442 ATP-grasp domain C3E78_14345 PF08460 Bacterial SH3 domain C3E78_14345 PF01551 Peptidase family M23 C3E78_14350 PF00580 UvrD/REP helicase N-terminal domain C3E78_14350 PF13361 UvrD-like helicase C-terminal domain C3E78_14360 PF00392 Bacterial regulatory proteins, gntR family C3E78_14375 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C3E78_14375 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C3E78_14380 PF00005 ABC transporter C3E78_14380 PF13732 Domain of unknown function (DUF4162) C3E78_14385 PF01061 ABC-2 type transporter C3E78_14390 PF00246 Zinc carboxypeptidase C3E78_14395 PF00196 Bacterial regulatory proteins, luxR family C3E78_14400 PF00196 Bacterial regulatory proteins, luxR family C3E78_14400 PF00072 Response regulator receiver domain C3E78_14425 PF03009 Glycerophosphoryl diester phosphodiesterase family C3E78_14435 PF06965 Na+/H+ antiporter 1 C3E78_14440 PF00723 Glycosyl hydrolases family 15 C3E78_14445 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C3E78_14445 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C3E78_14470 PF02540 NAD synthase C3E78_14470 PF00117 Glutamine amidotransferase class-I C3E78_14470 PF00958 GMP synthase C terminal domain C3E78_14490 PF05199 GMC oxidoreductase C3E78_14500 PF04261 Dyp-type peroxidase family C3E78_14500 PF10518 TAT (twin-arginine translocation) pathway signal sequence C3E78_14505 PF13473 Cupredoxin-like domain C3E78_14505 PF09375 Imelysin C3E78_14520 PF00478 IMP dehydrogenase / GMP reductase domain C3E78_14530 PF00571 CBS domain C3E78_14530 PF00478 IMP dehydrogenase / GMP reductase domain C3E78_14545 PF08206 Ribonuclease B OB domain C3E78_14545 PF00773 RNB domain C3E78_14550 PF00118 TCP-1/cpn60 chaperonin family C3E78_14555 PF00166 Chaperonin 10 Kd subunit C3E78_14560 PF07690 Major Facilitator Superfamily C3E78_14570 PF03746 LamB/YcsF family C3E78_14575 PF02682 Carboxyltransferase domain, subdomain C and D C3E78_14585 PF00933 Glycosyl hydrolase family 3 N terminal domain C3E78_14585 PF01915 Glycosyl hydrolase family 3 C-terminal domain C3E78_14590 PF00814 Glycoprotease family C3E78_14605 PF04978 Protein of unknown function (DUF664) C3E78_14615 PF01553 Acyltransferase C3E78_14630 PF00583 Acetyltransferase (GNAT) family C3E78_14630 PF00814 Glycoprotease family C3E78_14635 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C3E78_14640 PF00561 alpha/beta hydrolase fold C3E78_14645 PF00842 Alanine racemase, C-terminal domain C3E78_14645 PF01168 Alanine racemase, N-terminal domain C3E78_14650 PF03853 YjeF-related protein N-terminus C3E78_14650 PF01256 Carbohydrate kinase C3E78_14655 PF01648 4'-phosphopantetheinyl transferase superfamily C3E78_14660 PF01380 SIS domain C3E78_14665 PF00485 Phosphoribulokinase / Uridine kinase family C3E78_14685 PF03793 PASTA domain C3E78_14685 PF00069 Protein kinase domain C3E78_14690 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3E78_14690 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3E78_14690 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3E78_14690 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3E78_14695 PF00380 Ribosomal protein S9/S16 C3E78_14700 PF00572 Ribosomal protein L13 C3E78_14705 PF00285 Citrate synthase, C-terminal domain C3E78_14710 PF01416 tRNA pseudouridine synthase C3E78_14715 PF13302 Acetyltransferase (GNAT) domain C3E78_14730 PF05175 Methyltransferase small domain C3E78_14730 PF08468 Methyltransferase small domain N-terminal C3E78_14735 PF01483 Proprotein convertase P-domain C3E78_14735 PF00082 Subtilase family C3E78_14740 PF01196 Ribosomal protein L17 C3E78_14745 PF01000 RNA polymerase Rpb3/RpoA insert domain C3E78_14745 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C3E78_14745 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C3E78_14750 PF00163 Ribosomal protein S4/S9 N-terminal domain C3E78_14750 PF01479 S4 domain C3E78_14755 PF00411 Ribosomal protein S11 C3E78_14760 PF00416 Ribosomal protein S13/S18 C3E78_14765 PF00444 Ribosomal protein L36 C3E78_14770 PF01176 Translation initiation factor 1A / IF-1 C3E78_14775 PF01037 Lrp/AsnC ligand binding domain C3E78_14795 PF00557 Metallopeptidase family M24 C3E78_14805 PF00344 SecY translocase C3E78_14810 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C3E78_14815 PF00327 Ribosomal protein L30p/L7e C3E78_14820 PF00333 Ribosomal protein S5, N-terminal domain C3E78_14820 PF03719 Ribosomal protein S5, C-terminal domain C3E78_14825 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C3E78_14830 PF00347 Ribosomal protein L6 C3E78_14835 PF00410 Ribosomal protein S8 C3E78_14840 PF00253 Ribosomal protein S14p/S29e C3E78_14845 PF00281 Ribosomal protein L5 C3E78_14845 PF00673 ribosomal L5P family C-terminus C3E78_14850 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C3E78_14850 PF00467 KOW motif C3E78_14855 PF00238 Ribosomal protein L14p/L23e C3E78_14860 PF00366 Ribosomal protein S17 C3E78_14865 PF00831 Ribosomal L29 protein C3E78_14870 PF00252 Ribosomal protein L16p/L10e C3E78_14875 PF07650 KH domain C3E78_14875 PF00189 Ribosomal protein S3, C-terminal domain C3E78_14880 PF00237 Ribosomal protein L22p/L17e C3E78_14885 PF00203 Ribosomal protein S19 C3E78_14890 PF00181 Ribosomal Proteins L2, RNA binding domain C3E78_14890 PF03947 Ribosomal Proteins L2, C-terminal domain C3E78_14895 PF00276 Ribosomal protein L23 C3E78_14900 PF00573 Ribosomal protein L4/L1 family C3E78_14905 PF00297 Ribosomal protein L3 C3E78_14910 PF00338 Ribosomal protein S10p/S20e C3E78_14920 PF01545 Cation efflux family C3E78_14925 PF00009 Elongation factor Tu GTP binding domain C3E78_14925 PF03144 Elongation factor Tu domain 2 C3E78_14925 PF03143 Elongation factor Tu C-terminal domain C3E78_14930 PF00679 Elongation factor G C-terminus C3E78_14930 PF14492 Elongation Factor G, domain II C3E78_14930 PF03764 Elongation factor G, domain IV C3E78_14930 PF00009 Elongation factor Tu GTP binding domain C3E78_14930 PF03144 Elongation factor Tu domain 2 C3E78_14935 PF00177 Ribosomal protein S7p/S5e C3E78_14940 PF00164 Ribosomal protein S12/S23 C3E78_14945 PF02913 FAD linked oxidases, C-terminal domain C3E78_14945 PF01565 FAD binding domain C3E78_14945 PF13183 4Fe-4S dicluster domain C3E78_14950 PF00465 Iron-containing alcohol dehydrogenase C3E78_14955 PF00392 Bacterial regulatory proteins, gntR family C3E78_14955 PF07729 FCD domain C3E78_14965 PF00293 NUDIX domain C3E78_14970 PF01757 Acyltransferase family C3E78_14990 PF04998 RNA polymerase Rpb1, domain 5 C3E78_14990 PF05000 RNA polymerase Rpb1, domain 4 C3E78_14990 PF04983 RNA polymerase Rpb1, domain 3 C3E78_14990 PF04997 RNA polymerase Rpb1, domain 1 C3E78_14990 PF00623 RNA polymerase Rpb1, domain 2 C3E78_14995 PF04563 RNA polymerase beta subunit C3E78_14995 PF04561 RNA polymerase Rpb2, domain 2 C3E78_14995 PF04565 RNA polymerase Rpb2, domain 3 C3E78_14995 PF10385 RNA polymerase beta subunit external 1 domain C3E78_14995 PF00562 RNA polymerase Rpb2, domain 6 C3E78_14995 PF04560 RNA polymerase Rpb2, domain 7 C3E78_15040 PF02405 Permease MlaE C3E78_15045 PF02405 Permease MlaE C3E78_15050 PF00005 ABC transporter C3E78_15055 PF00542 Ribosomal protein L7/L12 C-terminal domain C3E78_15055 PF16320 Ribosomal protein L7/L12 dimerisation domain C3E78_15060 PF00466 Ribosomal protein L10 C3E78_15075 PF00687 Ribosomal protein L1p/L10e family C3E78_15080 PF03946 Ribosomal protein L11, N-terminal domain C3E78_15080 PF00298 Ribosomal protein L11, RNA binding domain C3E78_15085 PF02357 Transcription termination factor nusG C3E78_15090 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C3E78_15115 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C3E78_15115 PF01565 FAD binding domain C3E78_15120 PF00471 Ribosomal protein L33 C3E78_15140 PF01180 Dihydroorotate dehydrogenase C3E78_15150 PF01740 STAS domain C3E78_15150 PF04960 Glutaminase C3E78_15150 PF00027 Cyclic nucleotide-binding domain C3E78_15155 PF00672 HAMP domain C3E78_15155 PF00211 Adenylate and Guanylate cyclase catalytic domain C3E78_15170 PF16859 Tetracyclin repressor-like, C-terminal domain C3E78_15170 PF00440 Bacterial regulatory proteins, tetR family C3E78_15200 PF00199 Catalase C3E78_15200 PF06628 Catalase-related immune-responsive C3E78_15200 PF18011 C-terminal domain found in long catalases C3E78_15205 PF13026 Protein of unknown function (DUF3887) C3E78_15205 PF12146 Serine aminopeptidase, S33 C3E78_15220 PF07690 Major Facilitator Superfamily C3E78_15230 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family C3E78_15255 PF01256 Carbohydrate kinase C3E78_15285 PF05067 Manganese containing catalase C3E78_15290 PF04542 Sigma-70 region 2 C3E78_15290 PF04539 Sigma-70 region 3 C3E78_15290 PF04545 Sigma-70, region 4 C3E78_15310 PF07681 DoxX C3E78_15315 PF00775 Dioxygenase C3E78_15315 PF04444 Catechol dioxygenase N terminus C3E78_15325 PF02515 CoA-transferase family III C3E78_15330 PF01979 Amidohydrolase family C3E78_15335 PF09339 IclR helix-turn-helix domain C3E78_15335 PF01614 Bacterial transcriptional regulator C3E78_15350 PF00107 Zinc-binding dehydrogenase C3E78_15350 PF13823 Alcohol dehydrogenase GroES-associated C3E78_15350 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_15355 PF03006 Haemolysin-III related C3E78_15365 PF00107 Zinc-binding dehydrogenase C3E78_15365 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_15365 PF13823 Alcohol dehydrogenase GroES-associated C3E78_15370 PF01070 FMN-dependent dehydrogenase C3E78_15375 PF03334 Na+/H+ antiporter subunit C3E78_15390 PF00361 Proton-conducting membrane transporter C3E78_15395 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C3E78_15400 PF13244 Domain of unknown function (DUF4040) C3E78_15400 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C3E78_15400 PF00361 Proton-conducting membrane transporter C3E78_15400 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C3E78_15410 PF05199 GMC oxidoreductase C3E78_15410 PF00732 GMC oxidoreductase C3E78_15415 PF00535 Glycosyl transferase family 2 C3E78_15420 PF02633 Creatinine amidohydrolase C3E78_15425 PF01070 FMN-dependent dehydrogenase C3E78_15430 PF04055 Radical SAM superfamily C3E78_15430 PF13186 Iron-sulfur cluster-binding domain C3E78_15445 PF17754 MftR C-terminal domain C3E78_15445 PF00440 Bacterial regulatory proteins, tetR family C3E78_15455 PF04461 Protein of unknown function (DUF520) C3E78_15460 PF00361 Proton-conducting membrane transporter C3E78_15465 PF00361 Proton-conducting membrane transporter C3E78_15470 PF00361 Proton-conducting membrane transporter C3E78_15470 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C3E78_15475 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C3E78_15480 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C3E78_15485 PF00037 4Fe-4S binding domain C3E78_15490 PF00146 NADH dehydrogenase C3E78_15495 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C3E78_15495 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C3E78_15500 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C3E78_15505 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C3E78_15510 PF00106 short chain dehydrogenase C3E78_15520 PF00892 EamA-like transporter family C3E78_15525 PF00348 Polyprenyl synthetase C3E78_15530 PF00361 Proton-conducting membrane transporter C3E78_15535 PF00361 Proton-conducting membrane transporter C3E78_15540 PF00361 Proton-conducting membrane transporter C3E78_15540 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C3E78_15545 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C3E78_15550 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C3E78_15555 PF12838 4Fe-4S dicluster domain C3E78_15560 PF00146 NADH dehydrogenase C3E78_15565 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C3E78_15565 PF00384 Molybdopterin oxidoreductase C3E78_15565 PF01568 Molydopterin dinucleotide binding domain C3E78_15570 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C3E78_15570 PF10531 SLBB domain C3E78_15570 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C3E78_15580 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C3E78_15585 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C3E78_15590 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C3E78_15595 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C3E78_15600 PF01209 ubiE/COQ5 methyltransferase family C3E78_15605 PF00425 chorismate binding enzyme C3E78_15620 PF00211 Adenylate and Guanylate cyclase catalytic domain C3E78_15620 PF13191 AAA ATPase domain C3E78_15625 PF00171 Aldehyde dehydrogenase family C3E78_15630 PF05199 GMC oxidoreductase C3E78_15630 PF00732 GMC oxidoreductase C3E78_15635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3E78_15635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3E78_15640 PF18374 Enolase N-terminal domain-like C3E78_15640 PF13378 Enolase C-terminal domain-like C3E78_15645 PF13460 NAD(P)H-binding C3E78_15650 PF13193 AMP-binding enzyme C-terminal domain C3E78_15650 PF00501 AMP-binding enzyme C3E78_15660 PF01040 UbiA prenyltransferase family C3E78_15695 PF00106 short chain dehydrogenase C3E78_15705 PF00005 ABC transporter C3E78_15720 PF01578 Cytochrome C assembly protein C3E78_15730 PF02683 Cytochrome C biogenesis protein transmembrane region C3E78_15735 PF00085 Thioredoxin C3E78_15740 PF00300 Histidine phosphatase superfamily (branch 1) C3E78_15745 PF00202 Aminotransferase class-III C3E78_15755 PF00490 Delta-aminolevulinic acid dehydratase C3E78_15760 PF02602 Uroporphyrinogen-III synthase HemD C3E78_15760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3E78_15765 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C3E78_15765 PF03900 Porphobilinogen deaminase, C-terminal domain C3E78_15770 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C3E78_15770 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C3E78_15770 PF01488 Shikimate / quinate 5-dehydrogenase C3E78_15775 PF02629 CoA binding domain C3E78_15775 PF06971 Putative DNA-binding protein N-terminus C3E78_15785 PF00501 AMP-binding enzyme C3E78_15785 PF13193 AMP-binding enzyme C-terminal domain C3E78_15795 PF04542 Sigma-70 region 2 C3E78_15795 PF08281 Sigma-70, region 4 C3E78_15805 PF01553 Acyltransferase C3E78_15810 PF01370 NAD dependent epimerase/dehydratase family C3E78_15820 PF12728 Helix-turn-helix domain C3E78_15825 PF00850 Histone deacetylase domain C3E78_15830 PF14748 Pyrroline-5-carboxylate reductase dimerisation C3E78_15830 PF03807 NADP oxidoreductase coenzyme F420-dependent C3E78_15835 PF13593 SBF-like CPA transporter family (DUF4137) C3E78_15840 PF01810 LysE type translocator C3E78_15845 PF01261 Xylose isomerase-like TIM barrel C3E78_15850 PF02541 Ppx/GppA phosphatase family C3E78_15875 PF06745 KaiC C3E78_15875 PF18073 Rubredoxin metal binding domain C3E78_15880 PF02457 DisA bacterial checkpoint controller nucleotide-binding C3E78_15880 PF10635 DisA bacterial checkpoint controller linker region C3E78_15880 PF12826 Helix-hairpin-helix motif C3E78_15890 PF10576 Iron-sulfur binding domain of endonuclease III C3E78_15890 PF00633 Helix-hairpin-helix motif C3E78_15890 PF00730 HhH-GPD superfamily base excision DNA repair protein C3E78_15895 PF07724 AAA domain (Cdc48 subfamily) C3E78_15895 PF00004 ATPase family associated with various cellular activities (AAA) C3E78_15895 PF17871 AAA lid domain C3E78_15895 PF02861 Clp amino terminal domain, pathogenicity island component C3E78_15895 PF10431 C-terminal, D2-small domain, of ClpB protein C3E78_15900 PF06965 Na+/H+ antiporter 1 C3E78_15900 PF13462 Thioredoxin C3E78_15905 PF00152 tRNA synthetases class II (D, K and N) C3E78_15905 PF01336 OB-fold nucleic acid binding domain C3E78_15910 PF03309 Type III pantothenate kinase C3E78_15915 PF02261 Aspartate decarboxylase C3E78_15920 PF02569 Pantoate-beta-alanine ligase C3E78_15930 PF00535 Glycosyl transferase family 2 C3E78_15930 PF01501 Glycosyl transferase family 8 C3E78_15945 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C3E78_15960 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C3E78_15965 PF02152 Dihydroneopterin aldolase C3E78_15975 PF00809 Pterin binding enzyme C3E78_15980 PF01227 GTP cyclohydrolase I C3E78_15985 PF00004 ATPase family associated with various cellular activities (AAA) C3E78_15985 PF17862 AAA+ lid domain C3E78_15985 PF06480 FtsH Extracellular C3E78_15985 PF01434 Peptidase family M41 C3E78_15990 PF00156 Phosphoribosyl transferase domain C3E78_15995 PF01171 PP-loop family C3E78_15995 PF09179 TilS substrate binding domain C3E78_16005 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C3E78_16010 PF00719 Inorganic pyrophosphatase C3E78_16020 PF07995 Glucose / Sorbosone dehydrogenase C3E78_16030 PF00743 Flavin-binding monooxygenase-like C3E78_16085 PF01580 FtsK/SpoIIIE family C3E78_16105 PF00082 Subtilase family C3E78_16130 PF00082 Subtilase family C3E78_16135 PF14765 Polyketide synthase dehydratase C3E78_16135 PF16197 Ketoacyl-synthetase C-terminal extension C3E78_16135 PF08659 KR domain C3E78_16135 PF02801 Beta-ketoacyl synthase, C-terminal domain C3E78_16135 PF00109 Beta-ketoacyl synthase, N-terminal domain C3E78_16135 PF09277 Erythronolide synthase, docking C3E78_16135 PF08990 Erythronolide synthase docking C3E78_16135 PF00550 Phosphopantetheine attachment site C3E78_16135 PF00698 Acyl transferase domain C3E78_16135 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_16155 PF00248 Aldo/keto reductase family C3E78_16160 PF13411 MerR HTH family regulatory protein C3E78_16165 PF00535 Glycosyl transferase family 2 C3E78_16175 PF07690 Major Facilitator Superfamily C3E78_16180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3E78_16190 PF13520 Amino acid permease C3E78_16205 PF02570 Precorrin-8X methylmutase C3E78_16210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3E78_16215 PF00107 Zinc-binding dehydrogenase C3E78_16215 PF16884 N-terminal domain of oxidoreductase C3E78_16235 PF02566 OsmC-like protein C3E78_16250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3E78_16255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3E78_16260 PF07728 AAA domain (dynein-related subfamily) C3E78_16260 PF17863 AAA lid domain C3E78_16260 PF13519 von Willebrand factor type A domain C3E78_16265 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP C3E78_16270 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C3E78_16270 PF07685 CobB/CobQ-like glutamine amidotransferase domain C3E78_16275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3E78_16280 PF00300 Histidine phosphatase superfamily (branch 1) C3E78_16295 PF02277 Phosphoribosyltransferase C3E78_16300 PF00378 Enoyl-CoA hydratase/isomerase C3E78_16305 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C3E78_16310 PF03186 CobD/Cbib protein C3E78_16315 PF02571 Precorrin-6x reductase CbiJ/CobK C3E78_16320 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C3E78_16320 PF07685 CobB/CobQ-like glutamine amidotransferase domain C3E78_16330 PF00313 'Cold-shock' DNA-binding domain C3E78_16340 PF00005 ABC transporter C3E78_16380 PF01047 MarR family C3E78_16385 PF02310 B12 binding domain C3E78_16385 PF01642 Methylmalonyl-CoA mutase C3E78_16390 PF11762 L-arabinose isomerase C-terminal domain C3E78_16390 PF02610 L-arabinose isomerase C3E78_16395 PF00596 Class II Aldolase and Adducin N-terminal domain C3E78_16400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3E78_16400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3E78_16405 PF00356 Bacterial regulatory proteins, lacI family C3E78_16410 PF02653 Branched-chain amino acid transport system / permease component C3E78_16415 PF02653 Branched-chain amino acid transport system / permease component C3E78_16420 PF00005 ABC transporter C3E78_16425 PF13407 Periplasmic binding protein domain C3E78_16440 PF00378 Enoyl-CoA hydratase/isomerase C3E78_16445 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_16455 PF10431 C-terminal, D2-small domain, of ClpB protein C3E78_16455 PF00004 ATPase family associated with various cellular activities (AAA) C3E78_16455 PF07724 AAA domain (Cdc48 subfamily) C3E78_16455 PF17871 AAA lid domain C3E78_16455 PF02861 Clp amino terminal domain, pathogenicity island component C3E78_16460 PF00111 2Fe-2S iron-sulfur cluster binding domain C3E78_16460 PF00970 Oxidoreductase FAD-binding domain C3E78_16460 PF00175 Oxidoreductase NAD-binding domain C3E78_16480 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_16485 PF00440 Bacterial regulatory proteins, tetR family C3E78_16490 PF07690 Major Facilitator Superfamily C3E78_16505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C3E78_16505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C3E78_16510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_16510 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_16510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_16520 PF00171 Aldehyde dehydrogenase family C3E78_16525 PF01614 Bacterial transcriptional regulator C3E78_16525 PF09339 IclR helix-turn-helix domain C3E78_16530 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation C3E78_16530 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3E78_16535 PF07836 DmpG-like communication domain C3E78_16535 PF00682 HMGL-like C3E78_16540 PF00501 AMP-binding enzyme C3E78_16540 PF13193 AMP-binding enzyme C-terminal domain C3E78_16545 PF02515 CoA-transferase family III C3E78_16550 PF00378 Enoyl-CoA hydratase/isomerase C3E78_16555 PF01614 Bacterial transcriptional regulator C3E78_16555 PF09339 IclR helix-turn-helix domain C3E78_16565 PF01557 Fumarylacetoacetate (FAA) hydrolase family C3E78_16570 PF00107 Zinc-binding dehydrogenase C3E78_16570 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_16575 PF00561 alpha/beta hydrolase fold C3E78_16580 PF12697 Alpha/beta hydrolase family C3E78_16585 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C3E78_16595 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_16600 PF00037 4Fe-4S binding domain C3E78_16620 PF00171 Aldehyde dehydrogenase family C3E78_16630 PF02728 Copper amine oxidase, N3 domain C3E78_16630 PF01179 Copper amine oxidase, enzyme domain C3E78_16635 PF12697 Alpha/beta hydrolase family C3E78_16650 PF01614 Bacterial transcriptional regulator C3E78_16650 PF09339 IclR helix-turn-helix domain C3E78_16655 PF09339 IclR helix-turn-helix domain C3E78_16655 PF01614 Bacterial transcriptional regulator C3E78_16665 PF05199 GMC oxidoreductase C3E78_16665 PF00732 GMC oxidoreductase C3E78_16670 PF02653 Branched-chain amino acid transport system / permease component C3E78_16675 PF00005 ABC transporter C3E78_16685 PF05199 GMC oxidoreductase C3E78_16685 PF00732 GMC oxidoreductase C3E78_16690 PF00107 Zinc-binding dehydrogenase C3E78_16695 PF02653 Branched-chain amino acid transport system / permease component C3E78_16700 PF00005 ABC transporter C3E78_16705 PF13407 Periplasmic binding protein domain C3E78_16710 PF01425 Amidase C3E78_16715 PF01557 Fumarylacetoacetate (FAA) hydrolase family C3E78_16720 PF07969 Amidohydrolase family C3E78_16725 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C3E78_16735 PF01179 Copper amine oxidase, enzyme domain C3E78_16735 PF02728 Copper amine oxidase, N3 domain C3E78_16740 PF13382 Adenine deaminase C-terminal domain C3E78_16740 PF01979 Amidohydrolase family C3E78_16755 PF13520 Amino acid permease C3E78_16770 PF00561 alpha/beta hydrolase fold C3E78_16795 PF03061 Thioesterase superfamily C3E78_16800 PF00175 Oxidoreductase NAD-binding domain C3E78_16800 PF00111 2Fe-2S iron-sulfur cluster binding domain C3E78_16800 PF00970 Oxidoreductase FAD-binding domain C3E78_16805 PF01883 Iron-sulfur cluster assembly protein C3E78_16810 PF05138 Phenylacetic acid catabolic protein C3E78_16815 PF06243 Phenylacetic acid degradation B C3E78_16820 PF05138 Phenylacetic acid catabolic protein C3E78_16835 PF14535 AMP-binding enzyme C-terminal domain C3E78_16835 PF00501 AMP-binding enzyme C3E78_16840 PF00378 Enoyl-CoA hydratase/isomerase C3E78_16845 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C3E78_16845 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C3E78_16850 PF02817 e3 binding domain C3E78_16850 PF00364 Biotin-requiring enzyme C3E78_16850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3E78_16855 PF02780 Transketolase, C-terminal domain C3E78_16855 PF02779 Transketolase, pyrimidine binding domain C3E78_16860 PF00676 Dehydrogenase E1 component C3E78_16890 PF13193 AMP-binding enzyme C-terminal domain C3E78_16890 PF00501 AMP-binding enzyme C3E78_16900 PF00289 Biotin carboxylase, N-terminal domain C3E78_16900 PF02785 Biotin carboxylase C-terminal domain C3E78_16900 PF02436 Conserved carboxylase domain C3E78_16900 PF00682 HMGL-like C3E78_16900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3E78_16900 PF00364 Biotin-requiring enzyme C3E78_16920 PF13411 MerR HTH family regulatory protein C3E78_16925 PF00684 DnaJ central domain C3E78_16925 PF00226 DnaJ domain C3E78_16925 PF01556 DnaJ C terminal domain C3E78_16930 PF01025 GrpE C3E78_16935 PF00012 Hsp70 protein C3E78_16950 PF03176 MMPL family C3E78_16955 PF16859 Tetracyclin repressor-like, C-terminal domain C3E78_16955 PF00440 Bacterial regulatory proteins, tetR family C3E78_16975 PF12368 Rhodanase C-terminal C3E78_16975 PF00581 Rhodanese-like domain C3E78_16975 PF17773 UPF0176 acylphosphatase like domain C3E78_16985 PF01425 Amidase C3E78_17010 PF00557 Metallopeptidase family M24 C3E78_17025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_17025 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_17025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_17030 PF01575 MaoC like domain C3E78_17040 PF00005 ABC transporter C3E78_17045 PF09819 ABC-type cobalt transport system, permease component C3E78_17050 PF01266 FAD dependent oxidoreductase C3E78_17070 PF07690 Major Facilitator Superfamily C3E78_17075 PF02665 Nitrate reductase gamma subunit C3E78_17075 PF02754 Cysteine-rich domain C3E78_17075 PF13183 4Fe-4S dicluster domain C3E78_17080 PF02810 SEC-C motif C3E78_17090 PF00005 ABC transporter C3E78_17100 PF00294 pfkB family carbohydrate kinase C3E78_17105 PF00294 pfkB family carbohydrate kinase C3E78_17110 PF04227 Indigoidine synthase A like protein C3E78_17120 PF00692 dUTPase C3E78_17130 PF00583 Acetyltransferase (GNAT) family C3E78_17155 PF00535 Glycosyl transferase family 2 C3E78_17165 PF00072 Response regulator receiver domain C3E78_17165 PF00486 Transcriptional regulatory protein, C terminal C3E78_17170 PF01370 NAD dependent epimerase/dehydratase family C3E78_17175 PF01048 Phosphorylase superfamily C3E78_17185 PF00248 Aldo/keto reductase family C3E78_17195 PF00072 Response regulator receiver domain C3E78_17195 PF00990 Diguanylate cyclase, GGDEF domain C3E78_17205 PF09186 Domain of unknown function (DUF1949) C3E78_17205 PF01205 Uncharacterized protein family UPF0029 C3E78_17210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3E78_17210 PF03466 LysR substrate binding domain C3E78_17220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_17220 PF12806 Acetyl-CoA dehydrogenase C-terminal like C3E78_17220 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_17220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_17230 PF00106 short chain dehydrogenase C3E78_17240 PF02817 e3 binding domain C3E78_17240 PF00364 Biotin-requiring enzyme C3E78_17240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3E78_17245 PF02779 Transketolase, pyrimidine binding domain C3E78_17245 PF02780 Transketolase, C-terminal domain C3E78_17250 PF00676 Dehydrogenase E1 component C3E78_17255 PF00155 Aminotransferase class I and II C3E78_17260 PF00892 EamA-like transporter family C3E78_17265 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV C3E78_17270 PF01451 Low molecular weight phosphotyrosine protein phosphatase C3E78_17280 PF00072 Response regulator receiver domain C3E78_17280 PF00486 Transcriptional regulatory protein, C terminal C3E78_17285 PF00672 HAMP domain C3E78_17285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3E78_17285 PF00512 His Kinase A (phospho-acceptor) domain C3E78_17290 PF13180 PDZ domain C3E78_17295 PF00892 EamA-like transporter family C3E78_17310 PF14537 Cytochrome c3 C3E78_17310 PF00890 FAD binding domain C3E78_17325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3E78_17330 PF00392 Bacterial regulatory proteins, gntR family C3E78_17330 PF07729 FCD domain C3E78_17335 PF00171 Aldehyde dehydrogenase family C3E78_17340 PF08240 Alcohol dehydrogenase GroES-like domain C3E78_17340 PF00107 Zinc-binding dehydrogenase C3E78_17345 PF02653 Branched-chain amino acid transport system / permease component C3E78_17350 PF00005 ABC transporter C3E78_17375 PF00857 Isochorismatase family C3E78_17380 PF01979 Amidohydrolase family C3E78_17390 PF00392 Bacterial regulatory proteins, gntR family C3E78_17395 PF01177 Asp/Glu/Hydantoin racemase C3E78_17405 PF00425 chorismate binding enzyme C3E78_17405 PF00117 Glutamine amidotransferase class-I C3E78_17410 PF07687 Peptidase dimerisation domain C3E78_17410 PF01546 Peptidase family M20/M25/M40 C3E78_17440 PF00005 ABC transporter C3E78_17445 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3E78_17450 PF00378 Enoyl-CoA hydratase/isomerase C3E78_17455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_17455 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_17455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_17460 PF00364 Biotin-requiring enzyme C3E78_17460 PF02785 Biotin carboxylase C-terminal domain C3E78_17460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3E78_17460 PF00289 Biotin carboxylase, N-terminal domain C3E78_17465 PF01039 Carboxyl transferase domain C3E78_17470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_17470 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_17470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_17480 PF08608 Wyosine base formation C3E78_17480 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain C3E78_17485 PF00440 Bacterial regulatory proteins, tetR family C3E78_17505 PF07859 alpha/beta hydrolase fold C3E78_17515 PF01638 HxlR-like helix-turn-helix C3E78_17525 PF00365 Phosphofructokinase C3E78_17535 PF01053 Cys/Met metabolism PLP-dependent enzyme C3E78_17540 PF00561 alpha/beta hydrolase fold C3E78_17555 PF00106 short chain dehydrogenase C3E78_17560 PF00106 short chain dehydrogenase C3E78_17570 PF01061 ABC-2 type transporter C3E78_17575 PF13732 Domain of unknown function (DUF4162) C3E78_17575 PF00005 ABC transporter C3E78_17580 PF02469 Fasciclin domain C3E78_17595 PF00881 Nitroreductase family C3E78_17600 PF00378 Enoyl-CoA hydratase/isomerase C3E78_17620 PF11066 Protein of unknown function (DUF2867) C3E78_17620 PF13460 NAD(P)H-binding C3E78_17630 PF13520 Amino acid permease C3E78_17635 PF13302 Acetyltransferase (GNAT) domain C3E78_17645 PF00067 Cytochrome P450 C3E78_17650 PF00106 short chain dehydrogenase C3E78_17660 PF00005 ABC transporter C3E78_17665 PF01032 FecCD transport family C3E78_17670 PF01032 FecCD transport family C3E78_17675 PF00378 Enoyl-CoA hydratase/isomerase C3E78_17675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C3E78_17675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C3E78_17680 PF00108 Thiolase, N-terminal domain C3E78_17680 PF02803 Thiolase, C-terminal domain C3E78_17690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3E78_17690 PF02770 Acyl-CoA dehydrogenase, middle domain C3E78_17690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3E78_17695 PF02515 CoA-transferase family III C3E78_17700 PF12697 Alpha/beta hydrolase family C3E78_17710 PF01070 FMN-dependent dehydrogenase C3E78_17715 PF00005 ABC transporter C3E78_17720 PF00528 Binding-protein-dependent transport system inner membrane component C3E78_17725 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3E78_17735 PF03551 Transcriptional regulator PadR-like family C3E78_17735 PF10400 Virulence activator alpha C-term C3E78_17750 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3E78_17750 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_17765 PF02146 Sir2 family C3E78_17770 PF01842 ACT domain C3E78_17770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3E78_17770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3E78_17775 PF03061 Thioesterase superfamily C3E78_17780 PF02583 Metal-sensitive transcriptional repressor C3E78_17790 PF00403 Heavy-metal-associated domain C3E78_17810 PF00664 ABC transporter transmembrane region C3E78_17810 PF00005 ABC transporter C3E78_17830 PF09335 SNARE associated Golgi protein C3E78_17840 PF00772 DnaB-like helicase N terminal domain C3E78_17840 PF03796 DnaB-like helicase C terminal domain C3E78_17845 PF01554 MatE C3E78_17850 PF00561 alpha/beta hydrolase fold C3E78_17855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3E78_17860 PF01281 Ribosomal protein L9, N-terminal domain C3E78_17860 PF03948 Ribosomal protein L9, C-terminal domain C3E78_17865 PF01084 Ribosomal protein S18 C3E78_17875 PF01250 Ribosomal protein S6 C3E78_17890 PF04408 Helicase associated domain (HA2) C3E78_17890 PF00270 DEAD/DEAH box helicase C3E78_17890 PF00271 Helicase conserved C-terminal domain C3E78_17890 PF08482 ATP-dependent helicase C-terminal C3E78_17895 PF00248 Aldo/keto reductase family C3E78_17905 PF01841 Transglutaminase-like superfamily C3E78_17905 PF08379 Bacterial transglutaminase-like N-terminal region C3E78_17915 PF04174 A circularly permuted ATPgrasp C3E78_17940 PF00912 Transglycosylase C3E78_17940 PF00905 Penicillin binding protein transpeptidase domain C3E78_17950 PF01658 Myo-inositol-1-phosphate synthase C3E78_17965 PF00005 ABC transporter C3E78_17965 PF12399 Branched-chain amino acid ATP-binding cassette transporter C3E78_17970 PF00005 ABC transporter C3E78_17980 PF02653 Branched-chain amino acid transport system / permease component C3E78_17990 PF01743 Poly A polymerase head domain C3E78_17990 PF12627 Probable RNA and SrmB- binding site of polymerase A C3E78_17990 PF13735 tRNA nucleotidyltransferase domain 2 putative C3E78_18005 PF03023 Lipid II flippase MurJ C3E78_18010 PF00069 Protein kinase domain C3E78_18010 PF03793 PASTA domain C3E78_18015 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3E78_18020 PF00085 Thioredoxin C3E78_18025 PF17762 HTH domain found in ParB protein C3E78_18025 PF02195 ParB-like nuclease domain C3E78_18030 PF13614 AAA domain C3E78_18035 PF02527 rRNA small subunit methyltransferase G C3E78_18045 PF02096 60Kd inner membrane protein C3E78_18050 PF01809 Putative membrane protein insertion efficiency factor C3E78_18055 PF00825 Ribonuclease P C3E78_18060 PF00468 Ribosomal protein L34