AERYTH_00005	SM00382	ATPases associated with a variety of cellular activities
AERYTH_00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
AERYTH_00010	SM00480	DNA polymerase III beta subunit
AERYTH_00015	SM01350	AERYTH_00015
AERYTH_00040	SM00387	Histidine kinase-like ATPases
AERYTH_00040	SM00433	TopoisomeraseII
AERYTH_00045	SM00434	DNA Topoisomerase IV
AERYTH_00090	SM00382	ATPases associated with a variety of cellular activities
AERYTH_00105	SM00421	helix_turn_helix, Lux Regulon
AERYTH_00105	SM00448	cheY-homologous receiver domain
AERYTH_00115	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AERYTH_00155	SM00829	Enoylreductase
AERYTH_00160	SM00849	Metallo-beta-lactamase superfamily
AERYTH_00195	SM00382	ATPases associated with a variety of cellular activities
AERYTH_00210	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AERYTH_00210	SM00387	Histidine kinase-like ATPases
AERYTH_00215	SM00421	helix_turn_helix, Lux Regulon
AERYTH_00215	SM00448	cheY-homologous receiver domain
AERYTH_00365	SM00878	Biotin carboxylase C-terminal domain
AERYTH_00430	SM00448	cheY-homologous receiver domain
AERYTH_00430	SM00862	Transcriptional regulatory protein, C terminal
AERYTH_00435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AERYTH_00435	SM00387	Histidine kinase-like ATPases
AERYTH_00435	SM00388	His Kinase A (phosphoacceptor) domain
AERYTH_00480	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AERYTH_00485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AERYTH_00485	SM00387	Histidine kinase-like ATPases
AERYTH_00485	SM00388	His Kinase A (phosphoacceptor) domain
AERYTH_00490	SM00448	cheY-homologous receiver domain
AERYTH_00490	SM00862	Transcriptional regulatory protein, C terminal
AERYTH_00500	SM00226	Low molecular weight phosphatase family
AERYTH_00530	SM00861	Transketolase, pyrimidine binding domain
AERYTH_00600	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AERYTH_00620	SM00382	ATPases associated with a variety of cellular activities
AERYTH_00725	SM00938	Nitrogen regulatory protein P-II
AERYTH_00735	SM00422	helix_turn_helix, mercury resistance
AERYTH_00745	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AERYTH_00755	SM00226	Low molecular weight phosphatase family
AERYTH_00825	SM00849	Metallo-beta-lactamase superfamily
AERYTH_00850	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AERYTH_00850	SM01012	AERYTH_00850
AERYTH_00855	SM00248	ankyrin repeats
AERYTH_00875	SM00382	ATPases associated with a variety of cellular activities
AERYTH_00895	SM00822	AERYTH_00895
AERYTH_00935	SM00450	Rhodanese Homology Domain
AERYTH_00970	SM00327	von Willebrand factor (vWF) type A domain
AERYTH_00980	SM00382	ATPases associated with a variety of cellular activities
AERYTH_00990	SM00421	helix_turn_helix, Lux Regulon
AERYTH_00990	SM00448	cheY-homologous receiver domain
AERYTH_01000	SM00507	HNH nucleases
AERYTH_01015	SM00271	DnaJ molecular chaperone homology domain
AERYTH_01020	SM00422	helix_turn_helix, mercury resistance
AERYTH_01085	SM00530	Helix-turn-helix XRE-family like proteins 
AERYTH_01230	SM00382	ATPases associated with a variety of cellular activities
AERYTH_01230	SM01086	C-terminal, D2-small domain, of ClpB protein
AERYTH_01275	SM00347	helix_turn_helix multiple antibiotic resistance protein
AERYTH_01305	SM00529	Helix-turn-helix diphteria tox regulatory element
AERYTH_01305	SM00899	AERYTH_01305
AERYTH_01330	SM00382	ATPases associated with a variety of cellular activities
AERYTH_01425	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AERYTH_01425	SM01012	AERYTH_01425
AERYTH_01490	SM00704	CDGSH-type zinc finger. Function unknown.
AERYTH_01495	SM01236	AERYTH_01495
AERYTH_01505	SM00464	Found in ATP-dependent protease La (LON)
AERYTH_01510	SM00382	ATPases associated with a variety of cellular activities
AERYTH_01525	SM00493	AERYTH_01525
AERYTH_01555	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AERYTH_01695	SM00849	Metallo-beta-lactamase superfamily
AERYTH_01705	SM00838	Elongation factor G C-terminus
AERYTH_01710	SM00347	helix_turn_helix multiple antibiotic resistance protein
AERYTH_01735	SM00382	ATPases associated with a variety of cellular activities
AERYTH_01740	SM00062	Bacterial periplasmic substrate-binding proteins
AERYTH_01755	SM00855	Phosphoglycerate mutase family
AERYTH_01765	SM00448	cheY-homologous receiver domain
AERYTH_01765	SM00862	Transcriptional regulatory protein, C terminal
AERYTH_01770	SM00387	Histidine kinase-like ATPases
AERYTH_01770	SM00388	His Kinase A (phosphoacceptor) domain
AERYTH_01785	SM01058	CarD-like/TRCF domain
AERYTH_01800	SM00840	AERYTH_01800
AERYTH_01805	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AERYTH_01850	SM00903	Flavin reductase like domain
AERYTH_01860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AERYTH_01860	SM00895	AERYTH_01860
AERYTH_01935	SM00729	Elongator protein 3, MiaB family, Radical SAM
AERYTH_01935	SM00876	Biotin and Thiamin Synthesis associated domain
AERYTH_01970	SM01230	AERYTH_01970
AERYTH_02000	SM00530	Helix-turn-helix XRE-family like proteins 
AERYTH_02030	SM00382	ATPases associated with a variety of cellular activities
AERYTH_02070	SM00829	Enoylreductase
AERYTH_02090	SM00267	diguanylate cyclase
AERYTH_02100	SM01091	Transporter associated domain
AERYTH_02105	SM00421	helix_turn_helix, Lux Regulon
AERYTH_02185	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AERYTH_02220	SM00422	helix_turn_helix, mercury resistance
AERYTH_02235	SM00986	Uracil DNA glycosylase superfamily
AERYTH_02235	SM00987	UreE urease accessory protein, C-terminal domain 
AERYTH_02300	SM00357	Cold shock protein domain
AERYTH_02350	SM00382	ATPases associated with a variety of cellular activities
AERYTH_02350	SM00930	AERYTH_02350
AERYTH_02365	SM00797	Allophanate hydrolase subunit 2
AERYTH_02370	SM00796	Allophanate hydrolase subunit 1
AERYTH_02385	SM00883	Chaperonin 10 Kd subunit
AERYTH_02445	SM00116	Domain in cystathionine beta-synthase and other proteins.
AERYTH_02445	SM01240	AERYTH_02445
AERYTH_02460	SM01240	AERYTH_02460
AERYTH_02490	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AERYTH_02490	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AERYTH_02495	SM00100	Cyclic nucleotide-monophosphate binding domain
AERYTH_02500	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AERYTH_02620	SM00347	helix_turn_helix multiple antibiotic resistance protein
AERYTH_02625	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AERYTH_02635	SM00822	AERYTH_02635
AERYTH_02650	SM00822	AERYTH_02650
AERYTH_02700	SM00450	Rhodanese Homology Domain
AERYTH_02705	SM00382	ATPases associated with a variety of cellular activities
AERYTH_02740	SM00346	helix_turn_helix isocitrate lyase regulation
AERYTH_02840	SM00382	ATPases associated with a variety of cellular activities
AERYTH_02860	SM00905	Dihydroneopterin aldolase
AERYTH_02950	SM00420	helix_turn_helix, Deoxyribose operon repressor
AERYTH_02950	SM01134	AERYTH_02950
AERYTH_02970	SM00382	ATPases associated with a variety of cellular activities
AERYTH_02970	SM01086	C-terminal, D2-small domain, of ClpB protein
AERYTH_03010	SM00478	endonuclease III
AERYTH_03010	SM00525	AERYTH_03010
AERYTH_03030	SM00382	ATPases associated with a variety of cellular activities
AERYTH_03085	SM00563	Phosphate acyltransferases
AERYTH_03115	SM00881	CoA binding domain
AERYTH_03135	SM01004	Delta-aminolevulinic acid dehydratase
AERYTH_03155	SM00855	Phosphoglycerate mutase family
AERYTH_03225	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AERYTH_03260	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AERYTH_03290	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AERYTH_03295	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AERYTH_03375	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AERYTH_03390	SM00422	helix_turn_helix, mercury resistance
AERYTH_03395	SM00487	DEAD-like helicases superfamily
AERYTH_03395	SM00490	helicase superfamily c-terminal domain
AERYTH_03400	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AERYTH_03400	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AERYTH_03405	SM00344	helix_turn_helix ASNC type
AERYTH_03425	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AERYTH_03445	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AERYTH_03445	SM00895	AERYTH_03445
AERYTH_03450	SM00382	ATPases associated with a variety of cellular activities
AERYTH_03515	SM00919	Malic enzyme, NAD binding domain
AERYTH_03515	SM01274	AERYTH_03515
AERYTH_03530	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AERYTH_03530	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AERYTH_03535	SM00649	Ribosomal protein L11/L12
AERYTH_03550	SM00448	cheY-homologous receiver domain
AERYTH_03550	SM00862	Transcriptional regulatory protein, C terminal
AERYTH_03570	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AERYTH_03570	SM00387	Histidine kinase-like ATPases
AERYTH_03570	SM00388	His Kinase A (phosphoacceptor) domain
AERYTH_03590	SM00382	ATPases associated with a variety of cellular activities
AERYTH_03650	SM00663	RNA polymerase I subunit A N-terminus
AERYTH_03690	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AERYTH_03695	SM00788	Adenylosuccinate synthetase
AERYTH_03700	SM01209	AERYTH_03700
AERYTH_03700	SM01210	AERYTH_03700
AERYTH_03710	SM00998	Adenylosuccinate lyase C-terminus
AERYTH_03740	SM01211	AERYTH_03740
AERYTH_03755	SM00487	DEAD-like helicases superfamily
AERYTH_03755	SM00490	helicase superfamily c-terminal domain
AERYTH_03770	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AERYTH_03770	SM01232	AERYTH_03770
AERYTH_03815	SM00387	Histidine kinase-like ATPases
AERYTH_03820	SM00421	helix_turn_helix, Lux Regulon
AERYTH_03820	SM00448	cheY-homologous receiver domain
AERYTH_03845	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AERYTH_03875	SM00881	CoA binding domain
AERYTH_03895	SM00798	AICARFT/IMPCHase bienzyme
AERYTH_03895	SM00851	MGS-like domain
AERYTH_03925	SM00631	AERYTH_03925
AERYTH_03935	SM01060	AERYTH_03935
AERYTH_03960	SM00382	ATPases associated with a variety of cellular activities
AERYTH_04050	SM00347	helix_turn_helix multiple antibiotic resistance protein
AERYTH_04075	SM00382	ATPases associated with a variety of cellular activities
AERYTH_04100	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AERYTH_04120	SM01133	AERYTH_04120
AERYTH_04180	SM00387	Histidine kinase-like ATPases
AERYTH_04180	SM00388	His Kinase A (phosphoacceptor) domain
AERYTH_04185	SM00448	cheY-homologous receiver domain
AERYTH_04185	SM00862	Transcriptional regulatory protein, C terminal
AERYTH_04240	SM00357	Cold shock protein domain
AERYTH_04250	SM00479	AERYTH_04250
AERYTH_04295	SM00382	ATPases associated with a variety of cellular activities
AERYTH_04300	SM00347	helix_turn_helix multiple antibiotic resistance protein
AERYTH_04305	SM00867	YceI-like domain 
AERYTH_04330	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AERYTH_04355	SM00822	AERYTH_04355
AERYTH_04410	SM00862	Transcriptional regulatory protein, C terminal
AERYTH_04430	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AERYTH_04455	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AERYTH_04455	SM01232	AERYTH_04455
AERYTH_04460	SM00331	Sigma factor PP2C-like phosphatases
AERYTH_04535	SM00448	cheY-homologous receiver domain
AERYTH_04540	SM00091	PAS domain
AERYTH_04540	SM00387	Histidine kinase-like ATPases
AERYTH_04735	SM01208	AERYTH_04735
AERYTH_04740	SM00650	Ribosomal RNA adenine dimethylases
AERYTH_04750	SM00382	ATPases associated with a variety of cellular activities
AERYTH_04755	SM00347	helix_turn_helix multiple antibiotic resistance protein
AERYTH_04785	SM01400	AERYTH_04785
AERYTH_04800	SM00448	cheY-homologous receiver domain
AERYTH_04800	SM00862	Transcriptional regulatory protein, C terminal
AERYTH_04820	SM00387	Histidine kinase-like ATPases
AERYTH_04820	SM00388	His Kinase A (phosphoacceptor) domain
AERYTH_04835	SM00487	DEAD-like helicases superfamily
AERYTH_04835	SM00490	helicase superfamily c-terminal domain
AERYTH_04835	SM00982	AERYTH_04835
AERYTH_04835	SM01058	CarD-like/TRCF domain
AERYTH_04860	SM00382	ATPases associated with a variety of cellular activities
AERYTH_04890	SM00878	Biotin carboxylase C-terminal domain
AERYTH_04935	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AERYTH_04945	SM01001	AIR carboxylase
AERYTH_04975	SM00903	Flavin reductase like domain
AERYTH_04995	SM00382	ATPases associated with a variety of cellular activities
AERYTH_05040	SM00996	S-adenosyl-L-homocysteine hydrolase
AERYTH_05040	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AERYTH_05045	SM00448	cheY-homologous receiver domain
AERYTH_05045	SM00862	Transcriptional regulatory protein, C terminal
AERYTH_05050	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AERYTH_05050	SM00387	Histidine kinase-like ATPases
AERYTH_05050	SM00388	His Kinase A (phosphoacceptor) domain
AERYTH_05055	SM00909	Sporulation and spore germination
AERYTH_05070	SM00421	helix_turn_helix, Lux Regulon
AERYTH_05070	SM00448	cheY-homologous receiver domain
AERYTH_05080	SM00957	SecA DEAD-like domain
AERYTH_05080	SM00958	SecA preprotein cross-linking domain
AERYTH_05090	SM00257	Lysin motif
AERYTH_05150	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AERYTH_05150	SM00387	Histidine kinase-like ATPases
AERYTH_05150	SM00388	His Kinase A (phosphoacceptor) domain
AERYTH_05155	SM00448	cheY-homologous receiver domain
AERYTH_05155	SM00862	Transcriptional regulatory protein, C terminal
AERYTH_05230	SM00849	Metallo-beta-lactamase superfamily
AERYTH_05255	SM00937	AERYTH_05255
AERYTH_05270	SM00382	ATPases associated with a variety of cellular activities
AERYTH_05285	SM00382	ATPases associated with a variety of cellular activities
AERYTH_05355	SM00530	Helix-turn-helix XRE-family like proteins 
AERYTH_05370	SM00382	ATPases associated with a variety of cellular activities
AERYTH_05410	SM00756	AERYTH_05410
AERYTH_05425	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AERYTH_05425	SM01232	AERYTH_05425
AERYTH_05450	SM00422	helix_turn_helix, mercury resistance
AERYTH_05465	SM00487	DEAD-like helicases superfamily
AERYTH_05520	SM00248	ankyrin repeats
AERYTH_05525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AERYTH_05525	SM00895	AERYTH_05525
AERYTH_05530	SM00232	JAB/MPN domain
AERYTH_05545	SM01400	AERYTH_05545
AERYTH_05560	SM00382	ATPases associated with a variety of cellular activities
AERYTH_05570	SM00849	Metallo-beta-lactamase superfamily
AERYTH_05620	SM00883	Chaperonin 10 Kd subunit
AERYTH_05675	SM00822	AERYTH_05675
AERYTH_05745	SM00116	Domain in cystathionine beta-synthase and other proteins.
AERYTH_05745	SM00924	MgtE intracellular N domain
AERYTH_05785	SM00327	von Willebrand factor (vWF) type A domain
AERYTH_05805	SM00487	DEAD-like helicases superfamily
AERYTH_05820	SM00855	Phosphoglycerate mutase family
AERYTH_05825	SM00481	DNA polymerase alpha chain like domain
AERYTH_05865	SM00487	DEAD-like helicases superfamily
AERYTH_05865	SM00490	helicase superfamily c-terminal domain
AERYTH_05890	SM00450	Rhodanese Homology Domain
AERYTH_05920	SM00341	Helicase and RNase D C-terminal
AERYTH_05965	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AERYTH_06020	SM00342	helix_turn_helix, arabinose operon control protein
AERYTH_06085	SM00421	helix_turn_helix, Lux Regulon
AERYTH_06105	SM00448	cheY-homologous receiver domain
AERYTH_06105	SM00862	Transcriptional regulatory protein, C terminal
AERYTH_06210	SM00448	cheY-homologous receiver domain
AERYTH_06210	SM00862	Transcriptional regulatory protein, C terminal
AERYTH_06250	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AERYTH_06480	SM00382	ATPases associated with a variety of cellular activities
AERYTH_06500	SM00387	Histidine kinase-like ATPases
AERYTH_06500	SM00911	HWE histidine kinase
AERYTH_06515	SM00919	Malic enzyme, NAD binding domain
AERYTH_06515	SM01274	AERYTH_06515
AERYTH_06520	SM00829	Enoylreductase
AERYTH_06530	SM00382	ATPases associated with a variety of cellular activities
AERYTH_06540	SM00861	Transketolase, pyrimidine binding domain
AERYTH_06580	SM00052	Putative diguanylate phosphodiesterase
AERYTH_06590	SM00448	cheY-homologous receiver domain
AERYTH_06595	SM00836	DALR anticodon binding domain
AERYTH_06595	SM01016	Arginyl tRNA synthetase N terminal dom
AERYTH_06620	SM00422	helix_turn_helix, mercury resistance
AERYTH_06645	SM00357	Cold shock protein domain
AERYTH_06645	SM00959	Rho termination factor, N-terminal domain
AERYTH_06660	SM00937	AERYTH_06660
AERYTH_06720	SM00382	ATPases associated with a variety of cellular activities
AERYTH_06800	SM00829	Enoylreductase
AERYTH_06880	SM00893	Electron transfer flavoprotein domain
AERYTH_06885	SM00893	Electron transfer flavoprotein domain
AERYTH_06905	SM00382	ATPases associated with a variety of cellular activities
AERYTH_06920	SM00481	DNA polymerase alpha chain like domain
AERYTH_06975	SM00292	breast cancer carboxy-terminal domain
AERYTH_06975	SM00532	Ligase N family
AERYTH_06995	SM00845	GatB domain
AERYTH_07075	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AERYTH_07090	SM01329	AERYTH_07090
AERYTH_07120	SM00829	Enoylreductase
AERYTH_07185	SM00917	LeuA allosteric (dimerisation) domain
AERYTH_07215	SM00382	ATPases associated with a variety of cellular activities
AERYTH_07255	SM00968	SMC proteins Flexible Hinge Domain
AERYTH_07290	SM00382	ATPases associated with a variety of cellular activities
AERYTH_07300	SM00382	ATPases associated with a variety of cellular activities
AERYTH_07300	SM00962	SRP54-type protein, GTPase domain
AERYTH_07300	SM00963	SRP54-type protein, helical bundle domain
AERYTH_07310	SM00938	Nitrogen regulatory protein P-II
AERYTH_07315	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AERYTH_07320	SM00382	ATPases associated with a variety of cellular activities
AERYTH_07320	SM00962	SRP54-type protein, GTPase domain
AERYTH_07320	SM00963	SRP54-type protein, helical bundle domain
AERYTH_07325	SM00382	ATPases associated with a variety of cellular activities
AERYTH_07330	SM00382	ATPases associated with a variety of cellular activities
AERYTH_07400	SM00382	ATPases associated with a variety of cellular activities
AERYTH_07425	SM00382	ATPases associated with a variety of cellular activities
AERYTH_07485	SM00460	Transglutaminase/protease-like homologues
AERYTH_07495	SM00460	Transglutaminase/protease-like homologues
AERYTH_07505	SM00729	Elongator protein 3, MiaB family, Radical SAM
AERYTH_07535	SM00421	helix_turn_helix, Lux Regulon
AERYTH_07535	SM00448	cheY-homologous receiver domain
AERYTH_07545	SM00382	ATPases associated with a variety of cellular activities
AERYTH_07600	SM00316	Ribosomal protein S1-like RNA-binding domain
AERYTH_07625	SM00155	Phospholipase D. Active site motifs.
AERYTH_07635	SM00220	Serine/Threonine protein kinases, catalytic domain
AERYTH_07640	SM00448	cheY-homologous receiver domain
AERYTH_07640	SM00862	Transcriptional regulatory protein, C terminal
AERYTH_07645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AERYTH_07645	SM00387	Histidine kinase-like ATPases
AERYTH_07645	SM00388	His Kinase A (phosphoacceptor) domain
AERYTH_07655	SM00904	Riboflavin kinase
AERYTH_07660	SM01387	AERYTH_07660
AERYTH_07665	SM00316	Ribosomal protein S1-like RNA-binding domain
AERYTH_07665	SM00322	K homology RNA-binding domain
AERYTH_07700	SM00244	prohibitin homologues
AERYTH_07735	SM01130	AERYTH_07735
AERYTH_07740	SM00849	Metallo-beta-lactamase superfamily
AERYTH_07750	SM00382	ATPases associated with a variety of cellular activities
AERYTH_07750	SM00843	AERYTH_07750
AERYTH_07770	SM00530	Helix-turn-helix XRE-family like proteins 
AERYTH_07790	SM00382	ATPases associated with a variety of cellular activities
AERYTH_07820	SM00062	Bacterial periplasmic substrate-binding proteins
AERYTH_07825	SM00382	ATPases associated with a variety of cellular activities
AERYTH_07850	SM00729	Elongator protein 3, MiaB family, Radical SAM
AERYTH_07865	SM00382	ATPases associated with a variety of cellular activities
AERYTH_07910	SM00487	DEAD-like helicases superfamily
AERYTH_07910	SM00491	AERYTH_07910
AERYTH_07920	SM00257	Lysin motif
AERYTH_07950	SM00894	Excalibur calcium-binding domain
AERYTH_08025	SM00240	Forkhead associated domain
AERYTH_08070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AERYTH_08070	SM00895	AERYTH_08070
AERYTH_08080	SM00487	DEAD-like helicases superfamily
AERYTH_08080	SM00490	helicase superfamily c-terminal domain
AERYTH_08105	SM00357	Cold shock protein domain
AERYTH_08125	SM00347	helix_turn_helix multiple antibiotic resistance protein
AERYTH_08195	SM00387	Histidine kinase-like ATPases
AERYTH_08195	SM00433	TopoisomeraseII
AERYTH_08205	SM00947	Carbonic anhydrase
AERYTH_08220	SM00434	DNA Topoisomerase IV
AERYTH_08230	SM00881	CoA binding domain
AERYTH_08440	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AERYTH_08450	SM00387	Histidine kinase-like ATPases
AERYTH_08450	SM00388	His Kinase A (phosphoacceptor) domain
AERYTH_08460	SM00873	B3/4 domain
AERYTH_08460	SM00874	tRNA synthetase B5 domain
AERYTH_08460	SM00896	Ferredoxin-fold anticodon binding domain
AERYTH_08470	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AERYTH_08510	SM00823	Phosphopantetheine attachment site
AERYTH_08525	SM00347	helix_turn_helix multiple antibiotic resistance protein
AERYTH_08545	SM00363	S4 RNA-binding domain
AERYTH_08620	SM00240	Forkhead associated domain
AERYTH_08625	SM00422	helix_turn_helix, mercury resistance
AERYTH_08635	SM00422	helix_turn_helix, mercury resistance
AERYTH_08735	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AERYTH_08790	SM00344	helix_turn_helix ASNC type
AERYTH_08820	SM00382	ATPases associated with a variety of cellular activities
AERYTH_08860	SM00530	Helix-turn-helix XRE-family like proteins 
AERYTH_08900	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AERYTH_08900	SM00475	5'-3' exonuclease
AERYTH_08905	SM00487	DEAD-like helicases superfamily
AERYTH_08905	SM00490	helicase superfamily c-terminal domain
AERYTH_08905	SM01142	AERYTH_08905
AERYTH_08910	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AERYTH_08985	SM00382	ATPases associated with a variety of cellular activities
AERYTH_09010	SM01018	B12 binding domain
AERYTH_09060	SM00382	ATPases associated with a variety of cellular activities
AERYTH_09080	SM00822	AERYTH_09080
AERYTH_09110	SM00382	ATPases associated with a variety of cellular activities
AERYTH_09155	SM00382	ATPases associated with a variety of cellular activities
AERYTH_09155	SM00487	DEAD-like helicases superfamily
AERYTH_09155	SM00490	helicase superfamily c-terminal domain
AERYTH_09155	SM00847	Helicase associated domain (HA2)  Add an annotation
AERYTH_09165	SM00829	Enoylreductase
AERYTH_09170	SM00347	helix_turn_helix multiple antibiotic resistance protein
AERYTH_09200	SM00382	ATPases associated with a variety of cellular activities
AERYTH_09240	SM00244	prohibitin homologues
AERYTH_09250	SM00382	ATPases associated with a variety of cellular activities
AERYTH_09275	SM00729	Elongator protein 3, MiaB family, Radical SAM
AERYTH_09290	SM00382	ATPases associated with a variety of cellular activities
AERYTH_09310	SM00382	ATPases associated with a variety of cellular activities
AERYTH_09345	SM00954	Region found in RelA / SpoT proteins
AERYTH_09355	SM00382	ATPases associated with a variety of cellular activities
AERYTH_09380	SM00861	Transketolase, pyrimidine binding domain
AERYTH_09430	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AERYTH_09455	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AERYTH_09455	SM00465	GIY-YIG type nucleases (URI domain)
AERYTH_09475	SM00849	Metallo-beta-lactamase superfamily
AERYTH_09515	SM00487	DEAD-like helicases superfamily
AERYTH_09515	SM00490	helicase superfamily c-terminal domain
AERYTH_09530	SM00822	AERYTH_09530
AERYTH_09555	SM00861	Transketolase, pyrimidine binding domain
AERYTH_09560	SM00903	Flavin reductase like domain
AERYTH_09595	SM00382	ATPases associated with a variety of cellular activities
AERYTH_09615	SM01409	AERYTH_09615
AERYTH_09620	SM00072	Guanylate kinase homologues.
AERYTH_09635	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AERYTH_09640	SM00851	MGS-like domain
AERYTH_09640	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AERYTH_09645	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AERYTH_09670	SM00507	HNH nucleases
AERYTH_09690	SM00382	ATPases associated with a variety of cellular activities
AERYTH_09705	SM00841	Elongation factor P, C-terminal
AERYTH_09705	SM01185	AERYTH_09705
AERYTH_09750	SM00732	Likely ribonuclease with RNase H fold.
AERYTH_09755	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AERYTH_09770	SM00382	ATPases associated with a variety of cellular activities
AERYTH_09795	SM00849	Metallo-beta-lactamase superfamily
AERYTH_09815	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AERYTH_09815	SM00331	Sigma factor PP2C-like phosphatases
AERYTH_09840	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AERYTH_09840	SM00954	Region found in RelA / SpoT proteins
AERYTH_09865	SM01323	AERYTH_09865
AERYTH_09870	SM00382	ATPases associated with a variety of cellular activities
AERYTH_09875	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AERYTH_09925	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AERYTH_09945	SM00344	helix_turn_helix ASNC type
AERYTH_10110	SM00341	Helicase and RNase D C-terminal
AERYTH_10110	SM00474	3'-5' exonuclease
AERYTH_10140	SM00116	Domain in cystathionine beta-synthase and other proteins.
AERYTH_10210	SM00342	helix_turn_helix, arabinose operon control protein
AERYTH_10215	SM00316	Ribosomal protein S1-like RNA-binding domain
AERYTH_10265	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AERYTH_10265	SM00474	3'-5' exonuclease
AERYTH_10265	SM00475	5'-3' exonuclease
AERYTH_10265	SM00482	DNA polymerase A domain
AERYTH_10290	SM00382	ATPases associated with a variety of cellular activities
AERYTH_10295	SM00382	ATPases associated with a variety of cellular activities
AERYTH_10305	SM00448	cheY-homologous receiver domain
AERYTH_10305	SM01012	AERYTH_10305
AERYTH_10400	SM00382	ATPases associated with a variety of cellular activities
AERYTH_10405	SM00382	ATPases associated with a variety of cellular activities
AERYTH_10465	SM00481	DNA polymerase alpha chain like domain
AERYTH_10475	SM00382	ATPases associated with a variety of cellular activities
AERYTH_10495	SM00363	S4 RNA-binding domain
AERYTH_10540	SM00864	Tubulin/FtsZ family, GTPase domain
AERYTH_10540	SM00865	Tubulin/FtsZ family, C-terminal domain
AERYTH_10630	SM00220	Serine/Threonine protein kinases, catalytic domain
AERYTH_10630	SM00740	AERYTH_10630
AERYTH_10645	SM00563	Phosphate acyltransferases
AERYTH_10700	SM00465	GIY-YIG type nucleases (URI domain)
AERYTH_10700	SM00479	AERYTH_10700
AERYTH_10715	SM00448	cheY-homologous receiver domain
AERYTH_10820	SM01022	AERYTH_10820
AERYTH_10860	SM00382	ATPases associated with a variety of cellular activities
AERYTH_10865	SM00421	helix_turn_helix, Lux Regulon
AERYTH_10865	SM00448	cheY-homologous receiver domain
AERYTH_10870	SM00387	Histidine kinase-like ATPases
AERYTH_10875	SM00729	Elongator protein 3, MiaB family, Radical SAM
AERYTH_10895	SM01230	AERYTH_10895
AERYTH_10980	SM00829	Enoylreductase
AERYTH_11065	SM01230	AERYTH_11065
AERYTH_11120	SM00855	Phosphoglycerate mutase family
AERYTH_11135	SM00487	DEAD-like helicases superfamily
AERYTH_11135	SM00490	helicase superfamily c-terminal domain
AERYTH_11250	SM00400	zinc finger
AERYTH_11250	SM00493	AERYTH_11250
AERYTH_11255	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AERYTH_11265	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AERYTH_11265	SM01232	AERYTH_11265
AERYTH_11270	SM00358	Double-stranded RNA binding motif
AERYTH_11270	SM00535	Ribonuclease III family
AERYTH_11300	SM00487	DEAD-like helicases superfamily
AERYTH_11300	SM00490	helicase superfamily c-terminal domain
AERYTH_11305	SM01120	AERYTH_11305
AERYTH_11305	SM01121	AERYTH_11305
AERYTH_11350	SM00563	Phosphate acyltransferases
AERYTH_11370	SM00346	helix_turn_helix isocitrate lyase regulation
AERYTH_11405	SM00342	helix_turn_helix, arabinose operon control protein
AERYTH_11405	SM00478	endonuclease III
AERYTH_11405	SM01009	AlkA N-terminal domain
AERYTH_11475	SM01150	AERYTH_11475
AERYTH_11490	SM00917	LeuA allosteric (dimerisation) domain
AERYTH_11500	SM00346	helix_turn_helix isocitrate lyase regulation
AERYTH_11515	SM00460	Transglutaminase/protease-like homologues
AERYTH_11550	SM00481	DNA polymerase alpha chain like domain
AERYTH_11570	SM00116	Domain in cystathionine beta-synthase and other proteins.
AERYTH_11570	SM01091	Transporter associated domain
AERYTH_11590	SM00271	DnaJ molecular chaperone homology domain
AERYTH_11615	SM00729	Elongator protein 3, MiaB family, Radical SAM
AERYTH_11630	SM00838	Elongation factor G C-terminus
AERYTH_11660	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AERYTH_11665	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AERYTH_11685	SM00563	Phosphate acyltransferases
AERYTH_11755	SM00382	ATPases associated with a variety of cellular activities
AERYTH_11805	SM00752	Horizontally Transferred TransMembrane Domain
AERYTH_11820	SM00752	Horizontally Transferred TransMembrane Domain
AERYTH_11835	SM00347	helix_turn_helix multiple antibiotic resistance protein
AERYTH_11910	SM00382	ATPases associated with a variety of cellular activities
AERYTH_11950	SM00855	Phosphoglycerate mutase family
AERYTH_11975	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AERYTH_12010	SM00729	Elongator protein 3, MiaB family, Radical SAM
AERYTH_12030	SM00562	AERYTH_12030
AERYTH_12035	SM00642	Alpha-amylase domain
AERYTH_12055	SM00382	ATPases associated with a variety of cellular activities
AERYTH_12120	SM00382	ATPases associated with a variety of cellular activities
AERYTH_12120	SM00994	ClpX C4-type zinc finger
AERYTH_12120	SM01086	C-terminal, D2-small domain, of ClpB protein
AERYTH_12135	SM00822	AERYTH_12135
AERYTH_12145	SM00354	helix_turn _helix lactose operon repressor
AERYTH_12160	SM00354	helix_turn _helix lactose operon repressor
AERYTH_12175	SM00382	ATPases associated with a variety of cellular activities
AERYTH_12220	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AERYTH_12220	SM00866	AERYTH_12220
AERYTH_12275	SM00382	ATPases associated with a variety of cellular activities
AERYTH_12280	SM00563	Phosphate acyltransferases
AERYTH_12295	SM00363	S4 RNA-binding domain
AERYTH_12355	SM00363	S4 RNA-binding domain
AERYTH_12410	SM00852	Probable molybdopterin binding domain
AERYTH_12420	SM00852	Probable molybdopterin binding domain
AERYTH_12435	SM00116	Domain in cystathionine beta-synthase and other proteins.
AERYTH_12500	SM00530	Helix-turn-helix XRE-family like proteins 
AERYTH_12550	SM00529	Helix-turn-helix diphteria tox regulatory element
AERYTH_12635	SM00382	ATPases associated with a variety of cellular activities
AERYTH_12775	SM00382	ATPases associated with a variety of cellular activities
AERYTH_12840	SM00670	Large family of predicted nucleotide-binding domains
AERYTH_12855	SM00487	DEAD-like helicases superfamily
AERYTH_12855	SM00490	helicase superfamily c-terminal domain
AERYTH_12930	SM00986	Uracil DNA glycosylase superfamily
AERYTH_12930	SM00987	UreE urease accessory protein, C-terminal domain 
AERYTH_12940	SM00822	AERYTH_12940
AERYTH_13010	SM00344	helix_turn_helix ASNC type
AERYTH_13015	SM00861	Transketolase, pyrimidine binding domain
AERYTH_13045	SM00487	DEAD-like helicases superfamily
AERYTH_13045	SM00490	helicase superfamily c-terminal domain
AERYTH_13045	SM00847	Helicase associated domain (HA2)  Add an annotation
AERYTH_13070	SM00506	Appr-1"-p processing enzyme
AERYTH_13090	SM00382	ATPases associated with a variety of cellular activities
AERYTH_13155	SM00387	Histidine kinase-like ATPases
AERYTH_13160	SM00448	cheY-homologous receiver domain
AERYTH_13175	SM01192	AERYTH_13175
AERYTH_13175	SM01193	AERYTH_13175
AERYTH_13200	SM00382	ATPases associated with a variety of cellular activities
AERYTH_13260	SM00357	Cold shock protein domain
AERYTH_13365	SM00382	ATPases associated with a variety of cellular activities
AERYTH_13375	SM00563	Phosphate acyltransferases
AERYTH_13415	SM01005	Alanine racemase, C-terminal domain
AERYTH_13500	SM00662	RNA polymerases D
AERYTH_13505	SM00363	S4 RNA-binding domain
AERYTH_13505	SM01390	AERYTH_13505
AERYTH_13525	SM00316	Ribosomal protein S1-like RNA-binding domain
AERYTH_13530	SM00344	helix_turn_helix ASNC type
AERYTH_13605	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AERYTH_13610	SM01374	AERYTH_13610
AERYTH_13630	SM00322	K homology RNA-binding domain
AERYTH_13645	SM01382	AERYTH_13645
AERYTH_13645	SM01383	AERYTH_13645
AERYTH_13665	SM01403	AERYTH_13665
AERYTH_13670	SM00823	Phosphopantetheine attachment site
AERYTH_13695	SM00347	helix_turn_helix multiple antibiotic resistance protein
AERYTH_13705	SM00838	Elongation factor G C-terminus
AERYTH_13705	SM00889	Elongation factor G, domain IV
AERYTH_13765	SM00344	helix_turn_helix ASNC type
AERYTH_13905	SM00830	Chorismate mutase type II
AERYTH_13925	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AERYTH_13925	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AERYTH_13925	SM00493	AERYTH_13925
AERYTH_13940	SM00487	DEAD-like helicases superfamily
AERYTH_13940	SM00490	helicase superfamily c-terminal domain
AERYTH_14020	SM00387	Histidine kinase-like ATPases
AERYTH_14090	SM00116	Domain in cystathionine beta-synthase and other proteins.
AERYTH_14090	SM01240	AERYTH_14090
AERYTH_14105	SM00382	ATPases associated with a variety of cellular activities
AERYTH_14115	SM00448	cheY-homologous receiver domain
AERYTH_14115	SM00850	LytTr DNA-binding domain
AERYTH_14170	SM00478	endonuclease III
AERYTH_14170	SM00525	AERYTH_14170
AERYTH_14175	SM00100	Cyclic nucleotide-monophosphate binding domain
AERYTH_14175	SM00419	helix_turn_helix, cAMP Regulatory protein
AERYTH_14205	SM00530	Helix-turn-helix XRE-family like proteins 
AERYTH_14230	SM00487	DEAD-like helicases superfamily
AERYTH_14230	SM00490	helicase superfamily c-terminal domain
AERYTH_14280	SM00450	Rhodanese Homology Domain
AERYTH_14310	SM00862	Transcriptional regulatory protein, C terminal
AERYTH_14340	SM00855	Phosphoglycerate mutase family
AERYTH_14360	SM00382	ATPases associated with a variety of cellular activities
AERYTH_14395	SM00507	HNH nucleases
AERYTH_14420	SM00062	Bacterial periplasmic substrate-binding proteins
AERYTH_14425	SM00382	ATPases associated with a variety of cellular activities
AERYTH_14480	SM00729	Elongator protein 3, MiaB family, Radical SAM
AERYTH_14555	SM00421	helix_turn_helix, Lux Regulon
AERYTH_14565	SM00822	AERYTH_14565
AERYTH_14575	SM00829	Enoylreductase
AERYTH_14580	SM00903	Flavin reductase like domain
AERYTH_14630	SM00327	von Willebrand factor (vWF) type A domain
AERYTH_14630	SM00382	ATPases associated with a variety of cellular activities
AERYTH_14645	SM00116	Domain in cystathionine beta-synthase and other proteins.
AERYTH_14650	SM00116	Domain in cystathionine beta-synthase and other proteins.
AERYTH_14650	SM01091	Transporter associated domain
AERYTH_14670	SM00382	ATPases associated with a variety of cellular activities
AERYTH_14780	SM00862	Transcriptional regulatory protein, C terminal
AERYTH_14780	SM01043	Bacterial transcriptional activator domain
AERYTH_14825	SM00563	Phosphate acyltransferases
AERYTH_14835	SM00479	AERYTH_14835
AERYTH_14845	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AERYTH_14920	SM00829	Enoylreductase
AERYTH_14930	SM01006	Siderophore biosynthesis protein domain
AERYTH_14945	SM01006	Siderophore biosynthesis protein domain
AERYTH_14965	SM00382	ATPases associated with a variety of cellular activities
AERYTH_15080	SM00382	ATPases associated with a variety of cellular activities
AERYTH_15135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AERYTH_15135	SM00387	Histidine kinase-like ATPases
AERYTH_15135	SM00388	His Kinase A (phosphoacceptor) domain
AERYTH_15140	SM00448	cheY-homologous receiver domain
AERYTH_15140	SM00862	Transcriptional regulatory protein, C terminal
AERYTH_15280	SM01007	Class II Aldolase and Adducin N-terminal domain
AERYTH_15290	SM00354	helix_turn _helix lactose operon repressor
AERYTH_15305	SM00382	ATPases associated with a variety of cellular activities
AERYTH_15365	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AERYTH_15375	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AERYTH_15375	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AERYTH_15440	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
AERYTH_15465	SM00487	DEAD-like helicases superfamily
AERYTH_15465	SM00490	helicase superfamily c-terminal domain
AERYTH_15580	SM00984	UDP binding domain
AERYTH_15605	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AERYTH_15725	SM00465	GIY-YIG type nucleases (URI domain)
AERYTH_15730	SM00382	ATPases associated with a variety of cellular activities
AERYTH_15735	SM00382	ATPases associated with a variety of cellular activities
AERYTH_15760	SM00886	Stress responsive A/B Barrel Domain
AERYTH_15765	SM00849	Metallo-beta-lactamase superfamily
AERYTH_15850	SM00824	Thioesterase
AERYTH_15865	SM00650	Ribosomal RNA adenine dimethylases
AERYTH_15870	SM00758	AERYTH_15870
AERYTH_15870	SM01217	AERYTH_15870
AERYTH_15885	SM00824	Thioesterase
AERYTH_15910	SM00822	AERYTH_15910
AERYTH_15910	SM00823	Phosphopantetheine attachment site
AERYTH_15910	SM00824	Thioesterase
AERYTH_15910	SM00825	Beta-ketoacyl synthase
AERYTH_15910	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AERYTH_15910	SM01294	AERYTH_15910
AERYTH_15915	SM00822	AERYTH_15915
AERYTH_15915	SM00823	Phosphopantetheine attachment site
AERYTH_15915	SM00825	Beta-ketoacyl synthase
AERYTH_15915	SM00826	AERYTH_15915
AERYTH_15915	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AERYTH_15915	SM00829	Enoylreductase
AERYTH_15920	SM00822	AERYTH_15920
AERYTH_15920	SM00823	Phosphopantetheine attachment site
AERYTH_15920	SM00825	Beta-ketoacyl synthase
AERYTH_15920	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AERYTH_15920	SM01294	AERYTH_15920
AERYTH_15945	SM00347	helix_turn_helix multiple antibiotic resistance protein
AERYTH_15970	SM01007	Class II Aldolase and Adducin N-terminal domain
AERYTH_16025	SM00829	Enoylreductase
AERYTH_16065	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AERYTH_16110	SM00014	Acid phosphatase homologues
AERYTH_16110	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AERYTH_16140	SM00642	Alpha-amylase domain
AERYTH_16145	SM00642	Alpha-amylase domain
AERYTH_16155	SM00642	Alpha-amylase domain
AERYTH_16165	SM00642	Alpha-amylase domain
AERYTH_16175	SM00642	Alpha-amylase domain
AERYTH_16215	SM00450	Rhodanese Homology Domain
AERYTH_16220	SM00411	bacterial (prokaryotic) histone like domain
AERYTH_16255	SM00530	Helix-turn-helix XRE-family like proteins 
AERYTH_16295	SM00878	Biotin carboxylase C-terminal domain
AERYTH_16345	SM00342	helix_turn_helix, arabinose operon control protein
AERYTH_16365	SM00422	helix_turn_helix, mercury resistance
AERYTH_16390	SM00382	ATPases associated with a variety of cellular activities
AERYTH_16400	SM00829	Enoylreductase
AERYTH_16495	SM00240	Forkhead associated domain
AERYTH_16500	SM00240	Forkhead associated domain
AERYTH_16505	SM00331	Sigma factor PP2C-like phosphatases
AERYTH_16505	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AERYTH_16520	SM00220	Serine/Threonine protein kinases, catalytic domain
AERYTH_16520	SM00740	AERYTH_16520
AERYTH_16535	SM00855	Phosphoglycerate mutase family
AERYTH_16575	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
AERYTH_16610	SM00052	Putative diguanylate phosphodiesterase
AERYTH_16660	SM00382	ATPases associated with a variety of cellular activities
AERYTH_16685	SM00507	HNH nucleases
AERYTH_16700	SM00422	helix_turn_helix, mercury resistance
AERYTH_16735	SM00342	helix_turn_helix, arabinose operon control protein
AERYTH_16750	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AERYTH_16770	SM00382	ATPases associated with a variety of cellular activities
AERYTH_16780	SM00062	Bacterial periplasmic substrate-binding proteins
AERYTH_16780	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AERYTH_16805	SM00829	Enoylreductase
AERYTH_16810	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AERYTH_16875	SM00382	ATPases associated with a variety of cellular activities
AERYTH_16880	SM00028	Tetratricopeptide repeats
AERYTH_16905	SM00387	Histidine kinase-like ATPases
AERYTH_16910	SM00421	helix_turn_helix, Lux Regulon
AERYTH_16910	SM00448	cheY-homologous receiver domain
AERYTH_17020	SM00382	ATPases associated with a variety of cellular activities
AERYTH_17035	SM00507	HNH nucleases
AERYTH_17070	SM00382	ATPases associated with a variety of cellular activities
AERYTH_17120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AERYTH_17145	SM00460	Transglutaminase/protease-like homologues
AERYTH_17170	SM00507	HNH nucleases
AERYTH_17175	SM00220	Serine/Threonine protein kinases, catalytic domain
AERYTH_17190	SM00470	ParB-like nuclease domain
AERYTH_17205	SM00393	Putative single-stranded nucleic acids-binding domain
