locus-tag class description NP095_00005 PF00308 Bacterial dnaA protein NP095_00005 PF08299 Bacterial dnaA protein helix-turn-helix NP095_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NP095_00010 PF02767 DNA polymerase III beta subunit, central domain NP095_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NP095_00015 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NP095_00015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NP095_00020 PF02463 RecF/RecN/SMC N terminal domain NP095_00025 PF05258 Dna[CI] antecedent, DciA NP095_00035 PF02653 Branched-chain amino acid transport system / permease component NP095_00040 PF00005 ABC transporter NP095_00045 PF13407 Periplasmic binding protein domain NP095_00050 PF00455 DeoR C terminal sensor domain NP095_00050 PF08220 DeoR-like helix-turn-helix domain NP095_00055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NP095_00055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NP095_00055 PF01842 ACT domain NP095_00060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NP095_00060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NP095_00065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NP095_00065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NP095_00070 PF00300 Histidine phosphatase superfamily (branch 1) NP095_00075 PF00204 DNA gyrase B NP095_00075 PF00986 DNA gyrase B subunit, carboxyl terminus NP095_00075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP095_00075 PF01751 Toprim domain NP095_00080 PF03989 DNA gyrase C-terminal domain, beta-propeller NP095_00080 PF00521 DNA gyrase/topoisomerase IV, subunit A NP095_00085 PF12089 Transmembrane domain of unknown function (DUF3566) NP095_00120 PF00535 Glycosyl transferase family 2 NP095_00125 PF01040 UbiA prenyltransferase family NP095_00130 PF01040 UbiA prenyltransferase family NP095_00140 PF01593 Flavin containing amine oxidoreductase NP095_00150 PF00348 Polyprenyl synthetase NP095_00155 PF00293 NUDIX domain NP095_00180 PF00582 Universal stress protein family NP095_00185 PF07730 Histidine kinase NP095_00185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP095_00185 PF13185 GAF domain NP095_00185 PF13492 GAF domain NP095_00195 PF00072 Response regulator receiver domain NP095_00195 PF00196 Bacterial regulatory proteins, luxR family NP095_00200 PF14310 Fibronectin type III-like domain NP095_00200 PF01915 Glycosyl hydrolase family 3 C-terminal domain NP095_00200 PF07691 PA14 domain NP095_00200 PF00933 Glycosyl hydrolase family 3 N terminal domain NP095_00210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP095_00210 PF00005 ABC transporter NP095_00215 PF00528 Binding-protein-dependent transport system inner membrane component NP095_00220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP095_00225 PF00464 Serine hydroxymethyltransferase NP095_00240 PF01381 Helix-turn-helix NP095_00250 PF00378 Enoyl-CoA hydratase/isomerase NP095_00255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NP095_00260 PF01694 Rhomboid family NP095_00275 PF00069 Protein kinase domain NP095_00275 PF03793 PASTA domain NP095_00280 PF00905 Penicillin binding protein transpeptidase domain NP095_00285 PF01098 Cell cycle protein NP095_00295 PF16697 Inner membrane component of T3SS, cytoplasmic domain NP095_00320 PF02467 Transcription factor WhiB NP095_00330 PF00378 Enoyl-CoA hydratase/isomerase NP095_00340 PF09186 Domain of unknown function (DUF1949) NP095_00340 PF01205 Uncharacterized protein family UPF0029 NP095_00350 PF07690 Major Facilitator Superfamily NP095_00360 PF13344 Haloacid dehalogenase-like hydrolase NP095_00360 PF00293 NUDIX domain NP095_00365 PF00892 EamA-like transporter family NP095_00370 PF00440 Bacterial regulatory proteins, tetR family NP095_00375 PF01039 Carboxyl transferase domain NP095_00380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NP095_00380 PF00364 Biotin-requiring enzyme NP095_00380 PF00289 Biotin carboxylase, N-terminal domain NP095_00380 PF02785 Biotin carboxylase C-terminal domain NP095_00385 PF00682 HMGL-like NP095_00400 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NP095_00405 PF00216 Bacterial DNA-binding protein NP095_00415 PF03176 MMPL family NP095_00425 PF00581 Rhodanese-like domain NP095_00425 PF01206 Sulfurtransferase TusA NP095_00440 PF13419 Haloacid dehalogenase-like hydrolase NP095_00445 PF03636 Glycosyl hydrolase family 65, N-terminal domain NP095_00445 PF03632 Glycosyl hydrolase family 65 central catalytic domain NP095_00445 PF03633 Glycosyl hydrolase family 65, C-terminal domain NP095_00450 PF00781 Diacylglycerol kinase catalytic domain NP095_00455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NP095_00455 PF02403 Seryl-tRNA synthetase N-terminal domain NP095_00465 PF13193 AMP-binding enzyme C-terminal domain NP095_00465 PF00501 AMP-binding enzyme NP095_00465 PF16177 Acetyl-coenzyme A synthetase N-terminus NP095_00480 PF02674 Colicin V production protein NP095_00485 PF00293 NUDIX domain NP095_00490 PF10576 Iron-sulfur binding domain of endonuclease III NP095_00490 PF00633 Helix-hairpin-helix motif NP095_00490 PF00730 HhH-GPD superfamily base excision DNA repair protein NP095_00495 PF00027 Cyclic nucleotide-binding domain NP095_00495 PF13545 Crp-like helix-turn-helix domain NP095_00500 PF00753 Metallo-beta-lactamase superfamily NP095_00520 PF02374 Anion-transporting ATPase NP095_00525 PF02374 Anion-transporting ATPase NP095_00530 PF02467 Transcription factor WhiB NP095_00535 PF00905 Penicillin binding protein transpeptidase domain NP095_00535 PF00912 Transglycosylase NP095_00550 PF00005 ABC transporter NP095_00555 PF07730 Histidine kinase NP095_00555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP095_00560 PF00072 Response regulator receiver domain NP095_00560 PF00196 Bacterial regulatory proteins, luxR family NP095_00565 PF00149 Calcineurin-like phosphoesterase NP095_00575 PF13193 AMP-binding enzyme C-terminal domain NP095_00575 PF00501 AMP-binding enzyme NP095_00580 PF02774 Semialdehyde dehydrogenase, dimerisation domain NP095_00580 PF01118 Semialdehyde dehydrogenase, NAD binding domain NP095_00585 PF01842 ACT domain NP095_00585 PF00696 Amino acid kinase family NP095_00585 PF13840 ACT domain NP095_00590 PF13662 Toprim domain NP095_00590 PF02132 RecR protein NP095_00595 PF00893 Small Multidrug Resistance protein NP095_00600 PF00117 Glutamine amidotransferase class-I NP095_00635 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_00635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_00635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_00640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_00640 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_00640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_00645 PF03099 Biotin/lipoate A/B protein ligase family NP095_00645 PF10437 Bacterial lipoate protein ligase C-terminus NP095_00665 PF00672 HAMP domain NP095_00665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP095_00665 PF00512 His Kinase A (phospho-acceptor) domain NP095_00670 PF00072 Response regulator receiver domain NP095_00670 PF00486 Transcriptional regulatory protein, C terminal NP095_00685 PF05872 Bacterial protein of unknown function (DUF853) NP095_00700 PF00999 Sodium/hydrogen exchanger family NP095_00700 PF02080 TrkA-C domain NP095_00700 PF03471 Transporter associated domain NP095_00705 PF01220 Dehydroquinase class II NP095_00715 PF00296 Luciferase-like monooxygenase NP095_00750 PF03358 NADPH-dependent FMN reductase NP095_00755 PF00296 Luciferase-like monooxygenase NP095_00760 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NP095_00775 PF00962 Adenosine/AMP deaminase NP095_00780 PF02233 NAD(P) transhydrogenase beta subunit NP095_00785 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NP095_00785 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NP095_00785 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NP095_00805 PF02735 Ku70/Ku80 beta-barrel domain NP095_00815 PF04679 ATP dependent DNA ligase C terminal region NP095_00815 PF01068 ATP dependent DNA ligase domain NP095_00815 PF13298 DNA polymerase Ligase (LigD) NP095_00830 PF11838 ERAP1-like C-terminal domain NP095_00830 PF01433 Peptidase family M1 domain NP095_00855 PF03176 MMPL family NP095_00895 PF00795 Carbon-nitrogen hydrolase NP095_00900 PF00550 Phosphopantetheine attachment site NP095_00900 PF08240 Alcohol dehydrogenase GroES-like domain NP095_00900 PF00107 Zinc-binding dehydrogenase NP095_00900 PF16197 Ketoacyl-synthetase C-terminal extension NP095_00900 PF00109 Beta-ketoacyl synthase, N-terminal domain NP095_00900 PF02801 Beta-ketoacyl synthase, C-terminal domain NP095_00900 PF08659 KR domain NP095_00900 PF14765 Polyketide synthase dehydratase NP095_00900 PF00698 Acyl transferase domain NP095_00905 PF10759 Protein of unknown function (DUF2587) NP095_00915 PF00474 Sodium:solute symporter family NP095_00925 PF00072 Response regulator receiver domain NP095_00925 PF04397 LytTr DNA-binding domain NP095_00935 PF00005 ABC transporter NP095_00945 PF02909 Tetracyclin repressor-like, C-terminal domain NP095_00945 PF00440 Bacterial regulatory proteins, tetR family NP095_00950 PF00583 Acetyltransferase (GNAT) family NP095_00955 PF00571 CBS domain NP095_00955 PF00478 IMP dehydrogenase / GMP reductase domain NP095_00960 PF07694 5TMR of 5TMR-LYT NP095_00960 PF06580 Histidine kinase NP095_00985 PF00437 Type II/IV secretion system protein NP095_01020 PF02028 BCCT, betaine/carnitine/choline family transporter NP095_01025 PF00271 Helicase conserved C-terminal domain NP095_01025 PF09369 Domain of unknown function (DUF1998) NP095_01025 PF00270 DEAD/DEAH box helicase NP095_01030 PF01740 STAS domain NP095_01035 PF17827 PrmC N-terminal domain NP095_01035 PF05175 Methyltransferase small domain NP095_01045 PF13368 Topoisomerase C-terminal repeat NP095_01045 PF01131 DNA topoisomerase NP095_01045 PF01751 Toprim domain NP095_01050 PF00230 Major intrinsic protein NP095_01055 PF02223 Thymidylate kinase NP095_01060 PF09115 DNA polymerase III, delta subunit, C terminal NP095_01065 PF00561 alpha/beta hydrolase fold NP095_01070 PF01817 Chorismate mutase type II NP095_01070 PF02153 Prephenate dehydrogenase NP095_01090 PF01083 Cutinase NP095_01100 PF00155 Aminotransferase class I and II NP095_01110 PF00156 Phosphoribosyl transferase domain NP095_01120 PF01116 Fructose-bisphosphate aldolase class-II NP095_01135 PF00781 Diacylglycerol kinase catalytic domain NP095_01150 PF00709 Adenylosuccinate synthetase NP095_01185 PF02844 Phosphoribosylglycinamide synthetase, N domain NP095_01185 PF02843 Phosphoribosylglycinamide synthetase, C domain NP095_01185 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NP095_01195 PF00206 Lyase NP095_01195 PF10397 Adenylosuccinate lyase C-terminus NP095_01210 PF01259 SAICAR synthetase NP095_01215 PF00501 AMP-binding enzyme NP095_01215 PF13193 AMP-binding enzyme C-terminal domain NP095_01220 PF00534 Glycosyl transferases group 1 NP095_01220 PF00535 Glycosyl transferase family 2 NP095_01260 PF08241 Methyltransferase domain NP095_01265 PF00535 Glycosyl transferase family 2 NP095_01275 PF03358 NADPH-dependent FMN reductase NP095_01275 PF01566 Natural resistance-associated macrophage protein NP095_01280 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NP095_01280 PF06827 Zinc finger found in FPG and IleRS NP095_01300 PF00005 ABC transporter NP095_01300 PF13732 Domain of unknown function (DUF4162) NP095_01305 PF02769 AIR synthase related protein, C-terminal domain NP095_01305 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NP095_01305 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NP095_01320 PF01384 Phosphate transporter family NP095_01325 PF00005 ABC transporter NP095_01330 PF00528 Binding-protein-dependent transport system inner membrane component NP095_01335 PF00528 Binding-protein-dependent transport system inner membrane component NP095_01340 PF12849 PBP superfamily domain NP095_01350 PF00300 Histidine phosphatase superfamily (branch 1) NP095_01350 PF00293 NUDIX domain NP095_01355 PF02503 Polyphosphate kinase middle domain NP095_01355 PF13090 Polyphosphate kinase C-terminal domain 2 NP095_01355 PF17941 Polyphosphate kinase C-terminal domain 1 NP095_01355 PF13089 Polyphosphate kinase N-terminal domain NP095_01365 PF07859 alpha/beta hydrolase fold NP095_01370 PF00583 Acetyltransferase (GNAT) family NP095_01375 PF01039 Carboxyl transferase domain NP095_01380 PF00483 Nucleotidyl transferase NP095_01380 PF01050 Mannose-6-phosphate isomerase NP095_01390 PF01238 Phosphomannose isomerase type I NP095_01400 PF00486 Transcriptional regulatory protein, C terminal NP095_01415 PF00581 Rhodanese-like domain NP095_01420 PF07210 Protein of unknown function (DUF1416) NP095_01435 PF13380 CoA binding domain NP095_01445 PF02580 D-Tyr-tRNA(Tyr) deacylase NP095_01450 PF08768 Domain of unknown function (DUF1794) NP095_01455 PF01571 Aminomethyltransferase folate-binding domain NP095_01460 PF03880 DbpA RNA binding domain NP095_01460 PF00270 DEAD/DEAH box helicase NP095_01460 PF00271 Helicase conserved C-terminal domain NP095_01480 PF01381 Helix-turn-helix NP095_01505 PF00009 Elongation factor Tu GTP binding domain NP095_01505 PF00679 Elongation factor G C-terminus NP095_01505 PF14492 Elongation Factor G, domain II NP095_01505 PF03144 Elongation factor Tu domain 2 NP095_01515 PF07690 Major Facilitator Superfamily NP095_01525 PF01810 LysE type translocator NP095_01550 PF00749 tRNA synthetases class I (E and Q), catalytic domain NP095_01555 PF16123 Hydroxyacylglutathione hydrolase C-terminus NP095_01555 PF00753 Metallo-beta-lactamase superfamily NP095_01560 PF04075 F420H(2)-dependent quinone reductase NP095_01580 PF02678 Pirin NP095_01580 PF17954 Quercetinase C-terminal cupin domain NP095_01600 PF03334 Na+/H+ antiporter subunit NP095_01605 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NP095_01615 PF00361 Proton-conducting membrane transporter NP095_01620 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NP095_01625 PF13244 Domain of unknown function (DUF4040) NP095_01625 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NP095_01625 PF00361 Proton-conducting membrane transporter NP095_01625 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NP095_01640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NP095_01640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NP095_01640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NP095_01640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NP095_01645 PF00561 alpha/beta hydrolase fold NP095_01695 PF16884 N-terminal domain of oxidoreductase NP095_01695 PF00107 Zinc-binding dehydrogenase NP095_01720 PF02569 Pantoate-beta-alanine ligase NP095_01725 PF02261 Aspartate decarboxylase NP095_01730 PF03309 Type III pantothenate kinase NP095_01745 PF01336 OB-fold nucleic acid binding domain NP095_01745 PF00152 tRNA synthetases class II (D, K and N) NP095_01755 PF07687 Peptidase dimerisation domain NP095_01755 PF01546 Peptidase family M20/M25/M40 NP095_01760 PF10951 Protein of unknown function (DUF2776) NP095_01765 PF00004 ATPase family associated with various cellular activities (AAA) NP095_01765 PF07724 AAA domain (Cdc48 subfamily) NP095_01765 PF17871 AAA lid domain NP095_01765 PF02861 Clp amino terminal domain, pathogenicity island component NP095_01765 PF10431 C-terminal, D2-small domain, of ClpB protein NP095_01770 PF04229 GrpB protein NP095_01775 PF00730 HhH-GPD superfamily base excision DNA repair protein NP095_01775 PF00633 Helix-hairpin-helix motif NP095_01785 PF10635 DisA bacterial checkpoint controller linker region NP095_01785 PF12826 Helix-hairpin-helix motif NP095_01785 PF02457 DisA bacterial checkpoint controller nucleotide-binding NP095_01790 PF06745 KaiC NP095_01790 PF18073 Rubredoxin metal binding domain NP095_01810 PF02541 Ppx/GppA phosphatase family NP095_01815 PF01261 Xylose isomerase-like TIM barrel NP095_01825 PF13593 SBF-like CPA transporter family (DUF4137) NP095_01830 PF03641 Possible lysine decarboxylase NP095_01835 PF14748 Pyrroline-5-carboxylate reductase dimerisation NP095_01835 PF03807 NADP oxidoreductase coenzyme F420-dependent NP095_01840 PF00850 Histone deacetylase domain NP095_01845 PF12728 Helix-turn-helix domain NP095_01855 PF01370 NAD dependent epimerase/dehydratase family NP095_01860 PF01553 Acyltransferase NP095_01875 PF03176 MMPL family NP095_01890 PF13193 AMP-binding enzyme C-terminal domain NP095_01890 PF00501 AMP-binding enzyme NP095_01905 PF01757 Acyltransferase family NP095_01910 PF06971 Putative DNA-binding protein N-terminus NP095_01910 PF02629 CoA binding domain NP095_01915 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NP095_01915 PF01488 Shikimate / quinate 5-dehydrogenase NP095_01915 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NP095_01920 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NP095_01920 PF03900 Porphobilinogen deaminase, C-terminal domain NP095_01925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NP095_01925 PF10414 Sirohaem synthase dimerisation region NP095_01925 PF14824 Sirohaem biosynthesis protein central NP095_01930 PF00490 Delta-aminolevulinic acid dehydratase NP095_01935 PF00202 Aminotransferase class-III NP095_01940 PF00300 Histidine phosphatase superfamily (branch 1) NP095_01945 PF08534 Redoxin NP095_01950 PF02683 Cytochrome C biogenesis protein transmembrane region NP095_01960 PF01578 Cytochrome C assembly protein NP095_01970 PF00005 ABC transporter NP095_01975 PF01061 ABC-2 type transporter NP095_01995 PF01040 UbiA prenyltransferase family NP095_02000 PF00501 AMP-binding enzyme NP095_02000 PF13193 AMP-binding enzyme C-terminal domain NP095_02005 PF13460 NAD(P)H-binding NP095_02010 PF13378 Enolase C-terminal domain-like NP095_02010 PF18374 Enolase N-terminal domain-like NP095_02015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NP095_02015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP095_02020 PF05199 GMC oxidoreductase NP095_02020 PF00732 GMC oxidoreductase NP095_02025 PF00171 Aldehyde dehydrogenase family NP095_02045 PF00425 chorismate binding enzyme NP095_02050 PF01209 ubiE/COQ5 methyltransferase family NP095_02055 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NP095_02060 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NP095_02065 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NP095_02070 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NP095_02080 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NP095_02080 PF10531 SLBB domain NP095_02080 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NP095_02085 PF00384 Molybdopterin oxidoreductase NP095_02085 PF01568 Molydopterin dinucleotide binding domain NP095_02085 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NP095_02090 PF00146 NADH dehydrogenase NP095_02095 PF12838 4Fe-4S dicluster domain NP095_02100 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NP095_02105 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NP095_02110 PF00361 Proton-conducting membrane transporter NP095_02110 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NP095_02115 PF00361 Proton-conducting membrane transporter NP095_02120 PF00361 Proton-conducting membrane transporter NP095_02125 PF00348 Polyprenyl synthetase NP095_02130 PF00892 EamA-like transporter family NP095_02140 PF04461 Protein of unknown function (DUF520) NP095_02155 PF00535 Glycosyl transferase family 2 NP095_02160 PF00809 Pterin binding enzyme NP095_02170 PF01180 Dihydroorotate dehydrogenase NP095_02185 PF00471 Ribosomal protein L33 NP095_02190 PF01565 FAD binding domain NP095_02190 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NP095_02200 PF00962 Adenosine/AMP deaminase NP095_02210 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NP095_02215 PF02357 Transcription termination factor nusG NP095_02220 PF03946 Ribosomal protein L11, N-terminal domain NP095_02220 PF00298 Ribosomal protein L11, RNA binding domain NP095_02225 PF00687 Ribosomal protein L1p/L10e family NP095_02235 PF00466 Ribosomal protein L10 NP095_02240 PF00542 Ribosomal protein L7/L12 C-terminal domain NP095_02240 PF16320 Ribosomal protein L7/L12 dimerisation domain NP095_02245 PF04563 RNA polymerase beta subunit NP095_02245 PF04561 RNA polymerase Rpb2, domain 2 NP095_02245 PF10385 RNA polymerase beta subunit external 1 domain NP095_02245 PF00562 RNA polymerase Rpb2, domain 6 NP095_02245 PF04560 RNA polymerase Rpb2, domain 7 NP095_02245 PF04565 RNA polymerase Rpb2, domain 3 NP095_02250 PF04997 RNA polymerase Rpb1, domain 1 NP095_02250 PF00623 RNA polymerase Rpb1, domain 2 NP095_02250 PF04983 RNA polymerase Rpb1, domain 3 NP095_02250 PF05000 RNA polymerase Rpb1, domain 4 NP095_02250 PF04998 RNA polymerase Rpb1, domain 5 NP095_02255 PF01757 Acyltransferase family NP095_02265 PF00465 Iron-containing alcohol dehydrogenase NP095_02270 PF00392 Bacterial regulatory proteins, gntR family NP095_02270 PF07729 FCD domain NP095_02275 PF01565 FAD binding domain NP095_02275 PF13183 4Fe-4S dicluster domain NP095_02275 PF02913 FAD linked oxidases, C-terminal domain NP095_02285 PF00164 Ribosomal protein S12/S23 NP095_02290 PF00177 Ribosomal protein S7p/S5e NP095_02295 PF00679 Elongation factor G C-terminus NP095_02295 PF14492 Elongation Factor G, domain II NP095_02295 PF03764 Elongation factor G, domain IV NP095_02295 PF00009 Elongation factor Tu GTP binding domain NP095_02295 PF03144 Elongation factor Tu domain 2 NP095_02300 PF00009 Elongation factor Tu GTP binding domain NP095_02300 PF03144 Elongation factor Tu domain 2 NP095_02300 PF03143 Elongation factor Tu C-terminal domain NP095_02305 PF01545 Cation efflux family NP095_02310 PF00338 Ribosomal protein S10p/S20e NP095_02315 PF00297 Ribosomal protein L3 NP095_02320 PF00573 Ribosomal protein L4/L1 family NP095_02325 PF00276 Ribosomal protein L23 NP095_02330 PF00181 Ribosomal Proteins L2, RNA binding domain NP095_02330 PF03947 Ribosomal Proteins L2, C-terminal domain NP095_02335 PF00203 Ribosomal protein S19 NP095_02340 PF00237 Ribosomal protein L22p/L17e NP095_02345 PF07650 KH domain NP095_02345 PF00189 Ribosomal protein S3, C-terminal domain NP095_02350 PF00252 Ribosomal protein L16p/L10e NP095_02355 PF00831 Ribosomal L29 protein NP095_02360 PF00366 Ribosomal protein S17 NP095_02365 PF00238 Ribosomal protein L14p/L23e NP095_02370 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NP095_02370 PF00467 KOW motif NP095_02375 PF00673 ribosomal L5P family C-terminus NP095_02375 PF00281 Ribosomal protein L5 NP095_02380 PF00253 Ribosomal protein S14p/S29e NP095_02385 PF00410 Ribosomal protein S8 NP095_02390 PF00347 Ribosomal protein L6 NP095_02395 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NP095_02400 PF00333 Ribosomal protein S5, N-terminal domain NP095_02400 PF03719 Ribosomal protein S5, C-terminal domain NP095_02405 PF00327 Ribosomal protein L30p/L7e NP095_02410 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NP095_02415 PF00344 SecY translocase NP095_02425 PF00557 Metallopeptidase family M24 NP095_02445 PF07690 Major Facilitator Superfamily NP095_02450 PF07687 Peptidase dimerisation domain NP095_02450 PF01546 Peptidase family M20/M25/M40 NP095_02460 PF01176 Translation initiation factor 1A / IF-1 NP095_02465 PF00444 Ribosomal protein L36 NP095_02470 PF00416 Ribosomal protein S13/S18 NP095_02475 PF00411 Ribosomal protein S11 NP095_02480 PF00163 Ribosomal protein S4/S9 N-terminal domain NP095_02480 PF01479 S4 domain NP095_02485 PF01000 RNA polymerase Rpb3/RpoA insert domain NP095_02485 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NP095_02485 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NP095_02490 PF01196 Ribosomal protein L17 NP095_02495 PF01483 Proprotein convertase P-domain NP095_02495 PF00082 Subtilase family NP095_02500 PF00082 Subtilase family NP095_02500 PF04151 Bacterial pre-peptidase C-terminal domain NP095_02515 PF13193 AMP-binding enzyme C-terminal domain NP095_02515 PF00501 AMP-binding enzyme NP095_02520 PF13419 Haloacid dehalogenase-like hydrolase NP095_02525 PF00106 short chain dehydrogenase NP095_02530 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_02530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_02530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_02535 PF00528 Binding-protein-dependent transport system inner membrane component NP095_02540 PF00528 Binding-protein-dependent transport system inner membrane component NP095_02540 PF12911 N-terminal TM domain of oligopeptide transport permease C NP095_02545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP095_02545 PF00005 ABC transporter NP095_02550 PF00005 ABC transporter NP095_02550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP095_02555 PF13193 AMP-binding enzyme C-terminal domain NP095_02555 PF00501 AMP-binding enzyme NP095_02575 PF00378 Enoyl-CoA hydratase/isomerase NP095_02580 PF01575 MaoC like domain NP095_02595 PF02803 Thiolase, C-terminal domain NP095_02595 PF00108 Thiolase, N-terminal domain NP095_02600 PF00378 Enoyl-CoA hydratase/isomerase NP095_02610 PF08359 YsiA-like protein, C-terminal region NP095_02610 PF00440 Bacterial regulatory proteins, tetR family NP095_02615 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_02615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_02615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_02620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_02620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_02620 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_02625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_02625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_02625 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_02635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP095_02640 PF04679 ATP dependent DNA ligase C terminal region NP095_02640 PF01068 ATP dependent DNA ligase domain NP095_02640 PF04675 DNA ligase N terminus NP095_02650 PF02436 Conserved carboxylase domain NP095_02650 PF00682 HMGL-like NP095_02650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NP095_02650 PF00289 Biotin carboxylase, N-terminal domain NP095_02650 PF02785 Biotin carboxylase C-terminal domain NP095_02650 PF00364 Biotin-requiring enzyme NP095_02665 PF00293 NUDIX domain NP095_02670 PF01416 tRNA pseudouridine synthase NP095_02680 PF01638 HxlR-like helix-turn-helix NP095_02685 PF02803 Thiolase, C-terminal domain NP095_02685 PF00108 Thiolase, N-terminal domain NP095_02690 PF01113 Dihydrodipicolinate reductase, N-terminus NP095_02695 PF00108 Thiolase, N-terminal domain NP095_02695 PF02803 Thiolase, C-terminal domain NP095_02700 PF03055 Retinal pigment epithelial membrane protein NP095_02705 PF03060 Nitronate monooxygenase NP095_02710 PF00501 AMP-binding enzyme NP095_02710 PF13193 AMP-binding enzyme C-terminal domain NP095_02720 PF00378 Enoyl-CoA hydratase/isomerase NP095_02730 PF12399 Branched-chain amino acid ATP-binding cassette transporter NP095_02730 PF00005 ABC transporter NP095_02735 PF00005 ABC transporter NP095_02740 PF02653 Branched-chain amino acid transport system / permease component NP095_02745 PF11862 Domain of unknown function (DUF3382) NP095_02745 PF02653 Branched-chain amino acid transport system / permease component NP095_02755 PF00106 short chain dehydrogenase NP095_02765 PF13193 AMP-binding enzyme C-terminal domain NP095_02765 PF00501 AMP-binding enzyme NP095_02770 PF00106 short chain dehydrogenase NP095_02775 PF00501 AMP-binding enzyme NP095_02775 PF13193 AMP-binding enzyme C-terminal domain NP095_02785 PF00501 AMP-binding enzyme NP095_02785 PF13193 AMP-binding enzyme C-terminal domain NP095_02805 PF02551 Acyl-CoA thioesterase NP095_02815 PF00285 Citrate synthase, C-terminal domain NP095_02820 PF00572 Ribosomal protein L13 NP095_02825 PF00380 Ribosomal protein S9/S16 NP095_02830 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NP095_02830 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NP095_02830 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NP095_02830 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NP095_02845 PF00485 Phosphoribulokinase / Uridine kinase family NP095_02850 PF01380 SIS domain NP095_02855 PF03853 YjeF-related protein N-terminus NP095_02855 PF01256 Carbohydrate kinase NP095_02860 PF01168 Alanine racemase, N-terminal domain NP095_02860 PF00842 Alanine racemase, C-terminal domain NP095_02870 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NP095_02875 PF00814 Glycoprotease family NP095_02875 PF00583 Acetyltransferase (GNAT) family NP095_02895 PF01553 Acyltransferase NP095_02900 PF00814 Glycoprotease family NP095_02910 PF02682 Carboxyltransferase domain, subdomain C and D NP095_02915 PF03746 LamB/YcsF family NP095_02920 PF18096 THUMP domain-like NP095_02930 PF00166 Chaperonin 10 Kd subunit NP095_02935 PF00118 TCP-1/cpn60 chaperonin family NP095_02955 PF00037 4Fe-4S binding domain NP095_02955 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP095_02960 PF00571 CBS domain NP095_02960 PF00478 IMP dehydrogenase / GMP reductase domain NP095_02965 PF00478 IMP dehydrogenase / GMP reductase domain NP095_02970 PF00795 Carbon-nitrogen hydrolase NP095_02980 PF00171 Aldehyde dehydrogenase family NP095_02985 PF05199 GMC oxidoreductase NP095_02990 PF01812 5-formyltetrahydrofolate cyclo-ligase family NP095_03000 PF00994 Probable molybdopterin binding domain NP095_03000 PF03454 MoeA C-terminal region (domain IV) NP095_03000 PF03453 MoeA N-terminal region (domain I and II) NP095_03025 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NP095_03030 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NP095_03040 PF00005 ABC transporter NP095_03045 PF00296 Luciferase-like monooxygenase NP095_03050 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NP095_03050 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase NP095_03055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NP095_03060 PF00296 Luciferase-like monooxygenase NP095_03065 PF08264 Anticodon-binding domain of tRNA NP095_03065 PF09334 tRNA synthetases class I (M) NP095_03070 PF01026 TatD related DNase NP095_03085 PF00398 Ribosomal RNA adenine dimethylase NP095_03090 PF08544 GHMP kinases C terminal NP095_03090 PF00288 GHMP kinases N terminal domain NP095_03095 PF00005 ABC transporter NP095_03095 PF16326 ABC transporter C-terminal domain NP095_03095 PF12848 ABC transporter NP095_03100 PF01047 MarR family NP095_03110 PF00132 Bacterial transferase hexapeptide (six repeats) NP095_03110 PF12804 MobA-like NTP transferase domain NP095_03115 PF14572 Phosphoribosyl synthetase-associated domain NP095_03115 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NP095_03125 PF01386 Ribosomal L25p family NP095_03125 PF14693 Ribosomal protein TL5, C-terminal domain NP095_03130 PF01195 Peptidyl-tRNA hydrolase NP095_03145 PF05547 Immune inhibitor A peptidase M6 NP095_03145 PF00801 PKD domain NP095_03165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NP095_03165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NP095_03175 PF00534 Glycosyl transferases group 1 NP095_03175 PF13439 Glycosyltransferase Family 4 NP095_03200 PF13614 AAA domain NP095_03200 PF13807 G-rich domain on putative tyrosine kinase NP095_03200 PF02706 Chain length determinant protein NP095_03205 PF01451 Low molecular weight phosphotyrosine protein phosphatase NP095_03225 PF02559 CarD-like/TRCF domain NP095_03225 PF00270 DEAD/DEAH box helicase NP095_03225 PF00271 Helicase conserved C-terminal domain NP095_03225 PF03461 TRCF domain NP095_03225 PF17757 UvrB interaction domain NP095_03230 PF03816 Cell envelope-related transcriptional attenuator domain NP095_03240 PF03819 MazG nucleotide pyrophosphohydrolase domain NP095_03255 PF03952 Enolase, N-terminal domain NP095_03255 PF00113 Enolase, C-terminal TIM barrel domain NP095_03270 PF02541 Ppx/GppA phosphatase family NP095_03275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NP095_03275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NP095_03290 PF02390 Putative methyltransferase NP095_03330 PF02678 Pirin NP095_03330 PF05726 Pirin C-terminal cupin domain NP095_03335 PF00106 short chain dehydrogenase NP095_03340 PF00667 FAD binding domain NP095_03340 PF00258 Flavodoxin NP095_03340 PF00175 Oxidoreductase NAD-binding domain NP095_03340 PF00067 Cytochrome P450 NP095_03350 PF03167 Uracil DNA glycosylase superfamily NP095_03360 PF01625 Peptide methionine sulfoxide reductase NP095_03365 PF01594 AI-2E family transporter NP095_03370 PF00291 Pyridoxal-phosphate dependent enzyme NP095_03370 PF13291 ACT domain NP095_03375 PF03449 Transcription elongation factor, N-terminal NP095_03375 PF01272 Transcription elongation factor, GreA/GreB, C-term NP095_03385 PF02585 GlcNAc-PI de-N-acetylase NP095_03410 PF13302 Acetyltransferase (GNAT) domain NP095_03435 PF03190 Protein of unknown function, DUF255 NP095_03440 PF03006 Haemolysin-III related NP095_03445 PF01255 Putative undecaprenyl diphosphate synthase NP095_03450 PF13638 PIN domain NP095_03450 PF02562 PhoH-like protein NP095_03455 PF01433 Peptidase family M1 domain NP095_03455 PF11838 ERAP1-like C-terminal domain NP095_03460 PF04107 Glutamate-cysteine ligase family 2(GCS2) NP095_03465 PF01323 DSBA-like thioredoxin domain NP095_03475 PF02502 Ribose/Galactose Isomerase NP095_03480 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NP095_03480 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NP095_03480 PF06827 Zinc finger found in FPG and IleRS NP095_03510 PF06463 Molybdenum Cofactor Synthesis C NP095_03510 PF04055 Radical SAM superfamily NP095_03515 PF02391 MoaE protein NP095_03525 PF05698 Bacterial trigger factor protein (TF) C-terminus NP095_03525 PF05697 Bacterial trigger factor protein (TF) NP095_03525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP095_03550 PF00574 Clp protease NP095_03555 PF00574 Clp protease NP095_03560 PF06689 ClpX C4-type zinc finger NP095_03560 PF10431 C-terminal, D2-small domain, of ClpB protein NP095_03560 PF07724 AAA domain (Cdc48 subfamily) NP095_03565 PF03435 Saccharopine dehydrogenase NADP binding domain NP095_03570 PF00455 DeoR C terminal sensor domain NP095_03570 PF08220 DeoR-like helix-turn-helix domain NP095_03575 PF00133 tRNA synthetases class I (I, L, M and V) NP095_03575 PF08264 Anticodon-binding domain of tRNA NP095_03580 PF00293 NUDIX domain NP095_03585 PF03176 MMPL family NP095_03590 PF02875 Mur ligase family, glutamate ligase domain NP095_03590 PF08245 Mur ligase middle domain NP095_03610 PF00005 ABC transporter NP095_03610 PF17912 MalK OB fold domain NP095_03615 PF00528 Binding-protein-dependent transport system inner membrane component NP095_03620 PF00528 Binding-protein-dependent transport system inner membrane component NP095_03625 PF01547 Bacterial extracellular solute-binding protein NP095_03630 PF00128 Alpha amylase, catalytic domain NP095_03635 PF00334 Nucleoside diphosphate kinase NP095_03655 PF10415 Fumarase C C-terminus NP095_03655 PF00206 Lyase NP095_03660 PF00561 alpha/beta hydrolase fold NP095_03665 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NP095_03675 PF02609 Exonuclease VII small subunit NP095_03680 PF13742 OB-fold nucleic acid binding domain NP095_03680 PF02601 Exonuclease VII, large subunit NP095_03685 PF02401 LytB protein NP095_03705 PF02646 RmuC family NP095_03730 PF01926 50S ribosome-binding GTPase NP095_03730 PF06071 Protein of unknown function (DUF933) NP095_03750 PF02899 Phage integrase, N-terminal SAM-like domain NP095_03750 PF00589 Phage integrase family NP095_03755 PF03869 Arc-like DNA binding domain NP095_03760 PF01850 PIN domain NP095_03765 PF03831 PhnA domain NP095_03765 PF08274 PhnA Zinc-Ribbon NP095_03770 PF00005 ABC transporter NP095_03770 PF12848 ABC transporter NP095_03785 PF02447 GntP family permease NP095_03805 PF07690 Major Facilitator Superfamily NP095_03810 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family NP095_03815 PF13305 Tetracyclin repressor-like, C-terminal domain NP095_03815 PF00440 Bacterial regulatory proteins, tetR family NP095_03820 PF12697 Alpha/beta hydrolase family NP095_03825 PF00561 alpha/beta hydrolase fold NP095_03850 PF02733 Dak1 domain NP095_03855 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP095_03860 PF00528 Binding-protein-dependent transport system inner membrane component NP095_03865 PF00005 ABC transporter NP095_03880 PF03741 Integral membrane protein TerC family NP095_03885 PF03055 Retinal pigment epithelial membrane protein NP095_03890 PF00440 Bacterial regulatory proteins, tetR family NP095_03890 PF13305 Tetracyclin repressor-like, C-terminal domain NP095_03895 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NP095_03930 PF01758 Sodium Bile acid symporter family NP095_03940 PF00440 Bacterial regulatory proteins, tetR family NP095_03945 PF07859 alpha/beta hydrolase fold NP095_03950 PF00326 Prolyl oligopeptidase family NP095_03950 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NP095_03955 PF02585 GlcNAc-PI de-N-acetylase NP095_03960 PF01613 Flavin reductase like domain NP095_03970 PF00583 Acetyltransferase (GNAT) family NP095_03975 PF00037 4Fe-4S binding domain NP095_03980 PF00155 Aminotransferase class I and II NP095_03985 PF00480 ROK family NP095_03990 PF13407 Periplasmic binding protein domain NP095_03995 PF00005 ABC transporter NP095_04000 PF02653 Branched-chain amino acid transport system / permease component NP095_04005 PF00005 ABC transporter NP095_04020 PF14602 Hexapeptide repeat of succinyl-transferase NP095_04020 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle NP095_04025 PF00588 SpoU rRNA Methylase family NP095_04030 PF03180 NLPA lipoprotein NP095_04035 PF00005 ABC transporter NP095_04035 PF09383 NIL domain NP095_04040 PF00528 Binding-protein-dependent transport system inner membrane component NP095_04060 PF00141 Peroxidase NP095_04065 PF01475 Ferric uptake regulator family NP095_04070 PF04075 F420H(2)-dependent quinone reductase NP095_04080 PF00578 AhpC/TSA family NP095_04090 PF00166 Chaperonin 10 Kd subunit NP095_04105 PF03328 HpcH/HpaI aldolase/citrate lyase family NP095_04110 PF03328 HpcH/HpaI aldolase/citrate lyase family NP095_04115 PF03960 ArsC family NP095_04120 PF00994 Probable molybdopterin binding domain NP095_04120 PF03454 MoeA C-terminal region (domain IV) NP095_04120 PF03453 MoeA N-terminal region (domain I and II) NP095_04130 PF12804 MobA-like NTP transferase domain NP095_04135 PF00384 Molybdopterin oxidoreductase NP095_04135 PF01568 Molydopterin dinucleotide binding domain NP095_04140 PF13247 4Fe-4S dicluster domain NP095_04140 PF14711 Respiratory nitrate reductase beta C-terminal NP095_04145 PF02665 Nitrate reductase gamma subunit NP095_04145 PF00384 Molybdopterin oxidoreductase NP095_04145 PF02613 Nitrate reductase delta subunit NP095_04150 PF02613 Nitrate reductase delta subunit NP095_04150 PF02665 Nitrate reductase gamma subunit NP095_04150 PF00384 Molybdopterin oxidoreductase NP095_04155 PF07690 Major Facilitator Superfamily NP095_04160 PF00939 Sodium:sulfate symporter transmembrane region NP095_04180 PF06965 Na+/H+ antiporter 1 NP095_04190 PF01047 MarR family NP095_04200 PF00708 Acylphosphatase NP095_04215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NP095_04215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NP095_04220 PF07859 alpha/beta hydrolase fold NP095_04225 PF01266 FAD dependent oxidoreductase NP095_04225 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NP095_04230 PF01048 Phosphorylase superfamily NP095_04240 PF00929 Exonuclease NP095_04270 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NP095_04270 PF05221 S-adenosyl-L-homocysteine hydrolase NP095_04275 PF00072 Response regulator receiver domain NP095_04275 PF00486 Transcriptional regulatory protein, C terminal NP095_04280 PF00672 HAMP domain NP095_04280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP095_04280 PF00512 His Kinase A (phospho-acceptor) domain NP095_04285 PF10646 Sporulation and spore germination NP095_04285 PF10647 Lipoprotein LpqB beta-propeller domain NP095_04290 PF00156 Phosphoribosyl transferase domain NP095_04295 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NP095_04295 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NP095_04300 PF00196 Bacterial regulatory proteins, luxR family NP095_04300 PF00072 Response regulator receiver domain NP095_04305 PF06224 Winged helix DNA-binding domain NP095_04310 PF02810 SEC-C motif NP095_04310 PF07517 SecA DEAD-like domain NP095_04310 PF01043 SecA preprotein cross-linking domain NP095_04310 PF07516 SecA Wing and Scaffold domain NP095_04325 PF13411 MerR HTH family regulatory protein NP095_04330 PF00011 Hsp20/alpha crystallin family NP095_04350 PF10609 NUBPL iron-transfer P-loop NTPase NP095_04355 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NP095_04355 PF06974 Protein of unknown function (DUF1298) NP095_04370 PF04012 PspA/IM30 family NP095_04420 PF00829 Ribosomal prokaryotic L21 protein NP095_04425 PF01016 Ribosomal L27 protein NP095_04430 PF09269 Domain of unknown function (DUF1967) NP095_04430 PF01018 GTP1/OBG NP095_04430 PF01926 50S ribosome-binding GTPase NP095_04435 PF00696 Amino acid kinase family NP095_04435 PF01472 PUA domain NP095_04450 PF00171 Aldehyde dehydrogenase family NP095_04460 PF01467 Cytidylyltransferase-like NP095_04470 PF00300 Histidine phosphatase superfamily (branch 1) NP095_04480 PF08240 Alcohol dehydrogenase GroES-like domain NP095_04480 PF14765 Polyketide synthase dehydratase NP095_04480 PF02801 Beta-ketoacyl synthase, C-terminal domain NP095_04480 PF00109 Beta-ketoacyl synthase, N-terminal domain NP095_04480 PF08659 KR domain NP095_04480 PF00107 Zinc-binding dehydrogenase NP095_04480 PF00550 Phosphopantetheine attachment site NP095_04480 PF00698 Acyl transferase domain NP095_04480 PF16197 Ketoacyl-synthetase C-terminal extension NP095_04485 PF00440 Bacterial regulatory proteins, tetR family NP095_04495 PF12704 MacB-like periplasmic core domain NP095_04495 PF02687 FtsX-like permease family NP095_04495 PF00005 ABC transporter NP095_04510 PF07690 Major Facilitator Superfamily NP095_04515 PF05649 Peptidase family M13 NP095_04515 PF01431 Peptidase family M13 NP095_04525 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NP095_04530 PF07690 Major Facilitator Superfamily NP095_04535 PF00849 RNA pseudouridylate synthase NP095_04560 PF02585 GlcNAc-PI de-N-acetylase NP095_04600 PF00881 Nitroreductase family NP095_04620 PF12146 Serine aminopeptidase, S33 NP095_04645 PF04542 Sigma-70 region 2 NP095_04645 PF08281 Sigma-70, region 4 NP095_04645 PF12680 SnoaL-like domain NP095_04655 PF06912 Protein of unknown function (DUF1275) NP095_04665 PF01425 Amidase NP095_04675 PF00576 HIUase/Transthyretin family NP095_04680 PF01014 Uricase NP095_04685 PF01979 Amidohydrolase family NP095_04690 PF00266 Aminotransferase class-V NP095_04695 PF01546 Peptidase family M20/M25/M40 NP095_04710 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NP095_04710 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NP095_04710 PF01799 [2Fe-2S] binding domain NP095_04720 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NP095_04730 PF00005 ABC transporter NP095_04740 PF00528 Binding-protein-dependent transport system inner membrane component NP095_04745 PF12804 MobA-like NTP transferase domain NP095_04755 PF01645 Conserved region in glutamate synthase NP095_04795 PF07690 Major Facilitator Superfamily NP095_04810 PF03275 UDP-galactopyranose mutase NP095_04825 PF02386 Cation transport protein NP095_04830 PF02080 TrkA-C domain NP095_04830 PF02254 TrkA-N domain NP095_04835 PF08264 Anticodon-binding domain of tRNA NP095_04835 PF13603 Leucyl-tRNA synthetase, Domain 2 NP095_04835 PF09334 tRNA synthetases class I (M) NP095_04840 PF02645 Uncharacterised protein, DegV family COG1307 NP095_04845 PF10531 SLBB domain NP095_04860 PF01649 Ribosomal protein S20 NP095_04870 PF00679 Elongation factor G C-terminus NP095_04870 PF06421 GTP-binding protein LepA C-terminus NP095_04870 PF00009 Elongation factor Tu GTP binding domain NP095_04885 PF03009 Glycerophosphoryl diester phosphodiesterase family NP095_04890 PF00501 AMP-binding enzyme NP095_04895 PF04055 Radical SAM superfamily NP095_04900 PF13520 Amino acid permease NP095_04920 PF01628 HrcA protein C terminal domain NP095_04920 PF08220 DeoR-like helix-turn-helix domain NP095_04925 PF00684 DnaJ central domain NP095_04925 PF01556 DnaJ C terminal domain NP095_04925 PF00226 DnaJ domain NP095_04930 PF01230 HIT domain NP095_04935 PF02562 PhoH-like protein NP095_04940 PF02130 Uncharacterized protein family UPF0054 NP095_04945 PF00571 CBS domain NP095_04945 PF03471 Transporter associated domain NP095_04945 PF01595 Cyclin M transmembrane N-terminal domain NP095_04955 PF01926 50S ribosome-binding GTPase NP095_04955 PF07650 KH domain NP095_04960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP095_04960 PF03466 LysR substrate binding domain NP095_04965 PF01810 LysE type translocator NP095_04980 PF07726 ATPase family associated with various cellular activities (AAA) NP095_04980 PF17863 AAA lid domain NP095_04995 PF13409 Glutathione S-transferase, N-terminal domain NP095_05000 PF00682 HMGL-like NP095_05000 PF08502 LeuA allosteric (dimerisation) domain NP095_05020 PF00171 Aldehyde dehydrogenase family NP095_05025 PF00291 Pyridoxal-phosphate dependent enzyme NP095_05030 PF11967 Recombination protein O N terminal NP095_05030 PF02565 Recombination protein O C terminal NP095_05035 PF01255 Putative undecaprenyl diphosphate synthase NP095_05040 PF01494 FAD binding domain NP095_05055 PF01557 Fumarylacetoacetate (FAA) hydrolase family NP095_05060 PF00749 tRNA synthetases class I (E and Q), catalytic domain NP095_05090 PF02525 Flavodoxin-like fold NP095_05095 PF01565 FAD binding domain NP095_05095 PF02913 FAD linked oxidases, C-terminal domain NP095_05100 PF00296 Luciferase-like monooxygenase NP095_05115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP095_05115 PF03466 LysR substrate binding domain NP095_05120 PF03358 NADPH-dependent FMN reductase NP095_05125 PF01613 Flavin reductase like domain NP095_05130 PF00753 Metallo-beta-lactamase superfamily NP095_05135 PF08240 Alcohol dehydrogenase GroES-like domain NP095_05135 PF00107 Zinc-binding dehydrogenase NP095_05145 PF00730 HhH-GPD superfamily base excision DNA repair protein NP095_05145 PF12833 Helix-turn-helix domain NP095_05145 PF02805 Metal binding domain of Ada NP095_05145 PF06029 AlkA N-terminal domain NP095_05150 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NP095_05150 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NP095_05155 PF09339 IclR helix-turn-helix domain NP095_05155 PF01614 Bacterial transcriptional regulator NP095_05160 PF00330 Aconitase family (aconitate hydratase) NP095_05165 PF00694 Aconitase C-terminal domain NP095_05175 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NP095_05175 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NP095_05180 PF01053 Cys/Met metabolism PLP-dependent enzyme NP095_05185 PF01820 D-ala D-ala ligase N-terminus NP095_05185 PF07478 D-ala D-ala ligase C-terminus NP095_05200 PF02769 AIR synthase related protein, C-terminal domain NP095_05200 PF00586 AIR synthase related protein, N-terminal domain NP095_05205 PF01425 Amidase NP095_05210 PF00830 Ribosomal L28 family NP095_05215 PF13684 Dihydroxyacetone kinase family NP095_05215 PF02734 DAK2 domain NP095_05220 PF00270 DEAD/DEAH box helicase NP095_05220 PF00271 Helicase conserved C-terminal domain NP095_05220 PF17191 RecG wedge domain NP095_05230 PF01467 Cytidylyltransferase-like NP095_05235 PF00817 impB/mucB/samB family NP095_05235 PF11799 impB/mucB/samB family C-terminal domain NP095_05240 PF02620 Large ribosomal RNA subunit accumulation protein YceD NP095_05245 PF01783 Ribosomal L32p protein family NP095_05250 PF00035 Double-stranded RNA binding motif NP095_05250 PF14622 Ribonuclease-III-like NP095_05255 PF06827 Zinc finger found in FPG and IleRS NP095_05255 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NP095_05255 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NP095_05260 PF13286 Phosphohydrolase-associated domain NP095_05260 PF01966 HD domain NP095_05265 PF10410 DnaB-helicase binding domain of primase NP095_05265 PF08278 DNA primase DnaG DnaB-binding NP095_05265 PF13662 Toprim domain NP095_05265 PF08275 DNA primase catalytic core, N-terminal domain NP095_05265 PF01807 CHC2 zinc finger NP095_05290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP095_05295 PF00528 Binding-protein-dependent transport system inner membrane component NP095_05300 PF00005 ABC transporter NP095_05300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP095_05305 PF00005 ABC transporter NP095_05305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP095_05310 PF00356 Bacterial regulatory proteins, lacI family NP095_05315 PF07859 alpha/beta hydrolase fold NP095_05330 PF12697 Alpha/beta hydrolase family NP095_05340 PF00456 Transketolase, thiamine diphosphate binding domain NP095_05340 PF17831 Pyruvate dehydrogenase E1 component middle domain NP095_05345 PF11253 Protein of unknown function (DUF3052) NP095_05350 PF00578 AhpC/TSA family NP095_05370 PF09382 RQC domain NP095_05370 PF00570 HRDC domain NP095_05370 PF00271 Helicase conserved C-terminal domain NP095_05370 PF16124 RecQ zinc-binding NP095_05370 PF00270 DEAD/DEAH box helicase NP095_05375 PF01464 Transglycosylase SLT domain NP095_05375 PF01551 Peptidase family M23 NP095_05375 PF10145 Phage-related minor tail protein NP095_05380 PF01784 NIF3 (NGG1p interacting factor 3) NP095_05390 PF00300 Histidine phosphatase superfamily (branch 1) NP095_05390 PF13456 Reverse transcriptase-like NP095_05395 PF03883 Peroxide stress protein YaaA NP095_05400 PF01169 Uncharacterized protein family UPF0016 NP095_05420 PF05199 GMC oxidoreductase NP095_05420 PF00732 GMC oxidoreductase NP095_05430 PF00248 Aldo/keto reductase family NP095_05445 PF02548 Ketopantoate hydroxymethyltransferase NP095_05455 PF00795 Carbon-nitrogen hydrolase NP095_05455 PF02540 NAD synthase NP095_05460 PF03951 Glutamine synthetase, beta-Grasp domain NP095_05460 PF00120 Glutamine synthetase, catalytic domain NP095_05465 PF03710 Glutamate-ammonia ligase adenylyltransferase NP095_05465 PF08335 GlnD PII-uridylyltransferase NP095_05485 PF00487 Fatty acid desaturase NP095_05490 PF00175 Oxidoreductase NAD-binding domain NP095_05490 PF00970 Oxidoreductase FAD-binding domain NP095_05490 PF00111 2Fe-2S iron-sulfur cluster binding domain NP095_05500 PF04607 Region found in RelA / SpoT proteins NP095_05505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_05505 PF12806 Acetyl-CoA dehydrogenase C-terminal like NP095_05505 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_05505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_05515 PF02954 Bacterial regulatory protein, Fis family NP095_05515 PF00158 Sigma-54 interaction domain NP095_05525 PF13193 AMP-binding enzyme C-terminal domain NP095_05525 PF00501 AMP-binding enzyme NP095_05540 PF00072 Response regulator receiver domain NP095_05540 PF00486 Transcriptional regulatory protein, C terminal NP095_05545 PF00672 HAMP domain NP095_05545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP095_05545 PF00512 His Kinase A (phospho-acceptor) domain NP095_05565 PF00107 Zinc-binding dehydrogenase NP095_05565 PF08240 Alcohol dehydrogenase GroES-like domain NP095_05585 PF00196 Bacterial regulatory proteins, luxR family NP095_05585 PF00072 Response regulator receiver domain NP095_05590 PF00009 Elongation factor Tu GTP binding domain NP095_05590 PF03144 Elongation factor Tu domain 2 NP095_05590 PF16658 Class II release factor RF3, C-terminal domain NP095_05595 PF01367 5'-3' exonuclease, C-terminal SAM fold NP095_05595 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NP095_05595 PF00476 DNA polymerase family A NP095_05595 PF09281 Taq polymerase, exonuclease NP095_05620 PF02567 Phenazine biosynthesis-like protein NP095_05635 PF01252 Signal peptidase (SPase) II NP095_05660 PF08676 MutL C terminal dimerisation domain NP095_05660 PF01119 DNA mismatch repair protein, C-terminal domain NP095_05675 PF03852 DNA mismatch endonuclease Vsr NP095_05680 PF00145 C-5 cytosine-specific DNA methylase NP095_05685 PF00120 Glutamine synthetase, catalytic domain NP095_05685 PF03951 Glutamine synthetase, beta-Grasp domain NP095_05700 PF13829 Domain of unknown function (DUF4191) NP095_05705 PF04055 Radical SAM superfamily NP095_05710 PF00083 Sugar (and other) transporter NP095_05715 PF03099 Biotin/lipoate A/B protein ligase family NP095_05730 PF08338 Domain of unknown function (DUF1731) NP095_05730 PF01370 NAD dependent epimerase/dehydratase family NP095_05735 PF00364 Biotin-requiring enzyme NP095_05735 PF02817 e3 binding domain NP095_05735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NP095_05740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NP095_05740 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP095_05750 PF00144 Beta-lactamase NP095_05755 PF02789 Cytosol aminopeptidase family, N-terminal domain NP095_05755 PF00883 Cytosol aminopeptidase family, catalytic domain NP095_05760 PF01571 Aminomethyltransferase folate-binding domain NP095_05760 PF08669 Glycine cleavage T-protein C-terminal barrel domain NP095_05775 PF04012 PspA/IM30 family NP095_05780 PF01435 Peptidase family M48 NP095_05790 PF12897 Alanine-glyoxylate amino-transferase NP095_05795 PF02595 Glycerate kinase family NP095_05800 PF01521 Iron-sulphur cluster biosynthesis NP095_05805 PF00294 pfkB family carbohydrate kinase NP095_05810 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NP095_05815 PF00115 Cytochrome C and Quinol oxidase polypeptide I NP095_05820 PF12270 Cytochrome c oxidase subunit IV NP095_05825 PF17964 Bacterial Ig domain NP095_05825 PF03734 L,D-transpeptidase catalytic domain NP095_05845 PF13631 Cytochrome b(N-terminal)/b6/petB NP095_05850 PF00355 Rieske [2Fe-2S] domain NP095_05855 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NP095_05855 PF00034 Cytochrome c NP095_05860 PF00510 Cytochrome c oxidase subunit III NP095_05870 PF02885 Glycosyl transferase family, helical bundle domain NP095_05870 PF00591 Glycosyl transferase family, a/b domain NP095_05880 PF01541 GIY-YIG catalytic domain NP095_05880 PF00929 Exonuclease NP095_05890 PF00877 NlpC/P60 family NP095_05895 PF00501 AMP-binding enzyme NP095_05905 PF00480 ROK family NP095_05915 PF12146 Serine aminopeptidase, S33 NP095_05925 PF01474 Class-II DAHP synthetase family NP095_05930 PF00069 Protein kinase domain NP095_05930 PF03793 PASTA domain NP095_05935 PF00348 Polyprenyl synthetase NP095_05940 PF02219 Methylenetetrahydrofolate reductase NP095_05945 PF01593 Flavin containing amine oxidoreductase NP095_05960 PF02381 MraZ protein, putative antitoxin-like NP095_05965 PF01795 MraW methylase family NP095_05975 PF00905 Penicillin binding protein transpeptidase domain NP095_05975 PF03717 Penicillin-binding Protein dimerisation domain NP095_05980 PF08245 Mur ligase middle domain NP095_05980 PF02875 Mur ligase family, glutamate ligase domain NP095_05980 PF01225 Mur ligase family, catalytic domain NP095_05985 PF02875 Mur ligase family, glutamate ligase domain NP095_05985 PF08245 Mur ligase middle domain NP095_05985 PF01225 Mur ligase family, catalytic domain NP095_05990 PF00953 Glycosyl transferase family 4 NP095_05990 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NP095_05995 PF08245 Mur ligase middle domain NP095_05995 PF02875 Mur ligase family, glutamate ligase domain NP095_06000 PF01098 Cell cycle protein NP095_06005 PF04101 Glycosyltransferase family 28 C-terminal domain NP095_06005 PF03033 Glycosyltransferase family 28 N-terminal domain NP095_06010 PF08245 Mur ligase middle domain NP095_06010 PF02875 Mur ligase family, glutamate ligase domain NP095_06010 PF01225 Mur ligase family, catalytic domain NP095_06015 PF08478 POTRA domain, FtsQ-type NP095_06015 PF03799 Cell division protein FtsQ NP095_06020 PF00091 Tubulin/FtsZ family, GTPase domain NP095_06020 PF12327 FtsZ family, C-terminal domain NP095_06025 PF02578 Multi-copper polyphenol oxidoreductase laccase NP095_06030 PF01168 Alanine racemase, N-terminal domain NP095_06035 PF04472 Cell division protein SepF NP095_06045 PF05103 DivIVA protein NP095_06050 PF00133 tRNA synthetases class I (I, L, M and V) NP095_06050 PF08264 Anticodon-binding domain of tRNA NP095_06055 PF01258 Prokaryotic dksA/traR C4-type zinc finger NP095_06060 PF01252 Signal peptidase (SPase) II NP095_06065 PF00849 RNA pseudouridylate synthase NP095_06070 PF00155 Aminotransferase class I and II NP095_06080 PF00005 ABC transporter NP095_06080 PF13732 Domain of unknown function (DUF4162) NP095_06085 PF01061 ABC-2 type transporter NP095_06095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NP095_06095 PF02811 PHP domain NP095_06095 PF07733 Bacterial DNA polymerase III alpha NTPase domain NP095_06095 PF14579 Helix-hairpin-helix motif NP095_06105 PF04073 Aminoacyl-tRNA editing domain NP095_06110 PF03594 Benzoate membrane transport protein NP095_06115 PF00815 Histidinol dehydrogenase NP095_06120 PF00155 Aminotransferase class I and II NP095_06125 PF00475 Imidazoleglycerol-phosphate dehydratase NP095_06130 PF00117 Glutamine amidotransferase class-I NP095_06140 PF00977 Histidine biosynthesis protein NP095_06155 PF00977 Histidine biosynthesis protein NP095_06160 PF00005 ABC transporter NP095_06160 PF00664 ABC transporter transmembrane region NP095_06165 PF00005 ABC transporter NP095_06165 PF00664 ABC transporter transmembrane region NP095_06170 PF01502 Phosphoribosyl-AMP cyclohydrolase NP095_06200 PF00218 Indole-3-glycerol phosphate synthase NP095_06205 PF00291 Pyridoxal-phosphate dependent enzyme NP095_06210 PF00290 Tryptophan synthase alpha chain NP095_06215 PF01790 Prolipoprotein diacylglyceryl transferase NP095_06225 PF01678 Diaminopimelate epimerase NP095_06230 PF16360 GTP-binding GTPase Middle Region NP095_06230 PF01926 50S ribosome-binding GTPase NP095_06230 PF13167 GTP-binding GTPase N-terminal NP095_06235 PF13307 Helicase C-terminal domain NP095_06245 PF01370 NAD dependent epimerase/dehydratase family NP095_06250 PF00717 Peptidase S24-like NP095_06250 PF01726 LexA DNA binding domain NP095_06260 PF03631 Virulence factor BrkB NP095_06275 PF00210 Ferritin-like domain NP095_06285 PF03477 ATP cone domain NP095_06290 PF02867 Ribonucleotide reductase, barrel domain NP095_06290 PF08471 Class II vitamin B12-dependent ribonucleotide reductase NP095_06300 PF01654 Cytochrome bd terminal oxidase subunit I NP095_06305 PF14759 Reductase C-terminal NP095_06305 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP095_06315 PF07690 Major Facilitator Superfamily NP095_06320 PF13538 UvrD-like helicase C-terminal domain NP095_06325 PF13361 UvrD-like helicase C-terminal domain NP095_06325 PF00580 UvrD/REP helicase N-terminal domain NP095_06325 PF12705 PD-(D/E)XK nuclease superfamily NP095_06330 PF17946 RecC C-terminal domain NP095_06340 PF00474 Sodium:solute symporter family NP095_06365 PF00176 SNF2 family N-terminal domain NP095_06365 PF00271 Helicase conserved C-terminal domain NP095_06365 PF12419 SNF2 Helicase protein NP095_06380 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NP095_06380 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NP095_06385 PF00085 Thioredoxin NP095_06390 PF07995 Glucose / Sorbosone dehydrogenase NP095_06395 PF00313 'Cold-shock' DNA-binding domain NP095_06405 PF01494 FAD binding domain NP095_06415 PF01702 Queuine tRNA-ribosyltransferase NP095_06430 PF01053 Cys/Met metabolism PLP-dependent enzyme NP095_06435 PF00571 CBS domain NP095_06435 PF00291 Pyridoxal-phosphate dependent enzyme NP095_06445 PF07549 SecD/SecF GG Motif NP095_06445 PF02355 Protein export membrane protein NP095_06455 PF00248 Aldo/keto reductase family NP095_06475 PF01208 Uroporphyrinogen decarboxylase (URO-D) NP095_06480 PF01593 Flavin containing amine oxidoreductase NP095_06485 PF06778 Chlorite dismutase NP095_06500 PF01641 SelR domain NP095_06515 PF03976 Polyphosphate kinase 2 (PPK2) NP095_06530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NP095_06530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NP095_06535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_06535 PF18158 Adaptive response protein AidB N-terminal domain NP095_06535 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_06565 PF01063 Amino-transferase class IV NP095_06585 PF03466 LysR substrate binding domain NP095_06585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP095_06590 PF03466 LysR substrate binding domain NP095_06590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP095_06595 PF03060 Nitronate monooxygenase NP095_06600 PF03401 Tripartite tricarboxylate transporter family receptor NP095_06610 PF01970 Tripartite tricarboxylate transporter TctA family NP095_06615 PF08240 Alcohol dehydrogenase GroES-like domain NP095_06615 PF00107 Zinc-binding dehydrogenase NP095_06620 PF02515 CoA-transferase family III NP095_06630 PF00378 Enoyl-CoA hydratase/isomerase NP095_06640 PF02656 Domain of unknown function (DUF202) NP095_06755 PF02384 N-6 DNA Methylase NP095_06770 PF14659 Phage integrase, N-terminal SAM-like domain NP095_06770 PF00589 Phage integrase family NP095_06775 PF00005 ABC transporter NP095_06785 PF00072 Response regulator receiver domain NP095_06785 PF00486 Transcriptional regulatory protein, C terminal NP095_06790 PF13493 Domain of unknown function (DUF4118) NP095_06790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP095_06790 PF00512 His Kinase A (phospho-acceptor) domain NP095_06790 PF02702 Osmosensitive K+ channel His kinase sensor domain NP095_06790 PF00582 Universal stress protein family NP095_06795 PF02669 K+-transporting ATPase, c chain NP095_06805 PF03814 Potassium-transporting ATPase A subunit NP095_06815 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NP095_06820 PF01758 Sodium Bile acid symporter family NP095_06825 PF01451 Low molecular weight phosphotyrosine protein phosphatase NP095_06835 PF02082 Transcriptional regulator NP095_06845 PF03129 Anticodon binding domain NP095_06845 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NP095_06845 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NP095_06850 PF01230 HIT domain NP095_06855 PF01066 CDP-alcohol phosphatidyltransferase NP095_06860 PF01680 SOR/SNZ family NP095_06915 PF01174 SNO glutamine amidotransferase family NP095_06920 PF01709 Transcriptional regulator NP095_06930 PF02075 Crossover junction endodeoxyribonuclease RuvC NP095_06935 PF07499 RuvA, C-terminal domain NP095_06935 PF01330 RuvA N terminal domain NP095_06940 PF17864 RuvB AAA lid domain NP095_06940 PF05491 RuvB C-terminal winged helix domain NP095_06940 PF05496 Holliday junction DNA helicase RuvB P-loop domain NP095_06945 PF02699 Preprotein translocase subunit NP095_06950 PF00156 Phosphoribosyl transferase domain NP095_06955 PF02824 TGS domain NP095_06955 PF04607 Region found in RelA / SpoT proteins NP095_06955 PF13291 ACT domain NP095_06960 PF01541 GIY-YIG catalytic domain NP095_06965 PF03993 Domain of Unknown Function (DUF349) NP095_06970 PF00753 Metallo-beta-lactamase superfamily NP095_06975 PF13393 Histidyl-tRNA synthetase NP095_06975 PF03129 Anticodon binding domain NP095_06980 PF02938 GAD domain NP095_06980 PF00152 tRNA synthetases class II (D, K and N) NP095_06980 PF01336 OB-fold nucleic acid binding domain NP095_06985 PF04978 Protein of unknown function (DUF664) NP095_06995 PF00004 ATPase family associated with various cellular activities (AAA) NP095_06995 PF16193 AAA C-terminal domain NP095_06995 PF12002 MgsA AAA+ ATPase C terminal NP095_07010 PF02272 DHHA1 domain NP095_07010 PF01411 tRNA synthetases class II (A) NP095_07010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NP095_07015 PF03652 Holliday junction resolvase NP095_07025 PF01488 Shikimate / quinate 5-dehydrogenase NP095_07025 PF08501 Shikimate dehydrogenase substrate binding domain NP095_07025 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NP095_07035 PF01264 Chorismate synthase NP095_07040 PF01202 Shikimate kinase NP095_07045 PF01761 3-dehydroquinate synthase NP095_07050 PF01321 Creatinase/Prolidase N-terminal domain NP095_07050 PF00557 Metallopeptidase family M24 NP095_07055 PF01132 Elongation factor P (EF-P) OB domain NP095_07055 PF08207 Elongation factor P (EF-P) KOW-like domain NP095_07055 PF09285 Elongation factor P, C-terminal NP095_07060 PF01029 NusB family NP095_07070 PF04261 Dyp-type peroxidase family NP095_07070 PF10518 TAT (twin-arginine translocation) pathway signal sequence NP095_07075 PF09375 Imelysin NP095_07075 PF13473 Cupredoxin-like domain NP095_07080 PF03239 Iron permease FTR1 family NP095_07085 PF02720 Domain of unknown function (DUF222) NP095_07100 PF05547 Immune inhibitor A peptidase M6 NP095_07100 PF00801 PKD domain NP095_07125 PF00107 Zinc-binding dehydrogenase NP095_07125 PF08240 Alcohol dehydrogenase GroES-like domain NP095_07130 PF00583 Acetyltransferase (GNAT) family NP095_07140 PF00378 Enoyl-CoA hydratase/isomerase NP095_07145 PF08281 Sigma-70, region 4 NP095_07145 PF12680 SnoaL-like domain NP095_07145 PF04542 Sigma-70 region 2 NP095_07155 PF00248 Aldo/keto reductase family NP095_07160 PF00248 Aldo/keto reductase family NP095_07175 PF08240 Alcohol dehydrogenase GroES-like domain NP095_07175 PF00107 Zinc-binding dehydrogenase NP095_07190 PF04542 Sigma-70 region 2 NP095_07190 PF08281 Sigma-70, region 4 NP095_07200 PF07730 Histidine kinase NP095_07205 PF00072 Response regulator receiver domain NP095_07205 PF00196 Bacterial regulatory proteins, luxR family NP095_07210 PF00005 ABC transporter NP095_07220 PF13230 Glutamine amidotransferases class-II NP095_07225 PF18389 TrmO C-terminal domain NP095_07225 PF01980 tRNA-methyltransferase O NP095_07245 PF08240 Alcohol dehydrogenase GroES-like domain NP095_07245 PF00107 Zinc-binding dehydrogenase NP095_07250 PF17926 Tetracyclin repressor-like, C-terminal domain NP095_07250 PF00440 Bacterial regulatory proteins, tetR family NP095_07265 PF00156 Phosphoribosyl transferase domain NP095_07270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NP095_07270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NP095_07275 PF01979 Amidohydrolase family NP095_07280 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NP095_07280 PF00117 Glutamine amidotransferase class-I NP095_07285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NP095_07285 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NP095_07285 PF02142 MGS-like domain NP095_07290 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NP095_07325 PF00625 Guanylate kinase NP095_07330 PF01192 RNA polymerase Rpb6 NP095_07335 PF04127 DNA / pantothenate metabolism flavoprotein NP095_07335 PF02441 Flavoprotein NP095_07340 PF02773 S-adenosylmethionine synthetase, C-terminal domain NP095_07340 PF02772 S-adenosylmethionine synthetase, central domain NP095_07340 PF00438 S-adenosylmethionine synthetase, N-terminal domain NP095_07345 PF17764 3′ DNA-binding domain (3′BD) NP095_07350 PF00551 Formyl transferase NP095_07350 PF02911 Formyl transferase, C-terminal domain NP095_07355 PF01029 NusB family NP095_07355 PF01189 16S rRNA methyltransferase RsmB/F NP095_07360 PF00834 Ribulose-phosphate 3 epimerase family NP095_07365 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NP095_07365 PF01872 RibD C-terminal domain NP095_07370 PF00677 Lumazine binding domain NP095_07375 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NP095_07375 PF00925 GTP cyclohydrolase II NP095_07380 PF00885 6,7-dimethyl-8-ribityllumazine synthase NP095_07385 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NP095_07390 PF01634 ATP phosphoribosyltransferase NP095_07390 PF08029 HisG, C-terminal domain NP095_07420 PF00707 Translation initiation factor IF-3, C-terminal domain NP095_07420 PF05198 Translation initiation factor IF-3, N-terminal domain NP095_07425 PF01632 Ribosomal protein L35 NP095_07430 PF00453 Ribosomal protein L20 NP095_07435 PF08032 RNA 2'-O ribose methyltransferase substrate binding NP095_07435 PF00588 SpoU rRNA Methylase family NP095_07440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP095_07440 PF18698 Histidine kinase sensor domain NP095_07440 PF00512 His Kinase A (phospho-acceptor) domain NP095_07440 PF00989 PAS fold NP095_07440 PF00672 HAMP domain NP095_07445 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NP095_07445 PF01409 tRNA synthetases class II core domain (F) NP095_07450 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NP095_07450 PF01588 Putative tRNA binding domain NP095_07450 PF03147 Ferredoxin-fold anticodon binding domain NP095_07450 PF03483 B3/4 domain NP095_07450 PF03484 tRNA synthetase B5 domain NP095_07455 PF10415 Fumarase C C-terminus NP095_07455 PF00206 Lyase NP095_07460 PF00682 HMGL-like NP095_07460 PF08502 LeuA allosteric (dimerisation) domain NP095_07470 PF04542 Sigma-70 region 2 NP095_07470 PF08281 Sigma-70, region 4 NP095_07475 PF02720 Domain of unknown function (DUF222) NP095_07510 PF03733 Inner membrane component domain NP095_07525 PF00106 short chain dehydrogenase NP095_07530 PF00999 Sodium/hydrogen exchanger family NP095_07555 PF00296 Luciferase-like monooxygenase NP095_07575 PF04408 Helicase associated domain (HA2) NP095_07575 PF00271 Helicase conserved C-terminal domain NP095_07575 PF08482 ATP-dependent helicase C-terminal NP095_07575 PF00270 DEAD/DEAH box helicase NP095_07600 PF03989 DNA gyrase C-terminal domain, beta-propeller NP095_07600 PF00521 DNA gyrase/topoisomerase IV, subunit A NP095_07605 PF07690 Major Facilitator Superfamily NP095_07655 PF00561 alpha/beta hydrolase fold NP095_07660 PF00196 Bacterial regulatory proteins, luxR family NP095_07665 PF13673 Acetyltransferase (GNAT) domain NP095_07675 PF01475 Ferric uptake regulator family NP095_07680 PF00950 ABC 3 transport family NP095_07685 PF00005 ABC transporter NP095_07690 PF01297 Zinc-uptake complex component A periplasmic NP095_07690 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment NP095_07695 PF03129 Anticodon binding domain NP095_07695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NP095_07705 PF01207 Dihydrouridine synthase (Dus) NP095_07725 PF06470 SMC proteins Flexible Hinge Domain NP095_07725 PF02463 RecF/RecN/SMC N terminal domain NP095_07730 PF03061 Thioesterase superfamily NP095_07740 PF01654 Cytochrome bd terminal oxidase subunit I NP095_07745 PF02322 Cytochrome bd terminal oxidase subunit II NP095_07750 PF00664 ABC transporter transmembrane region NP095_07750 PF00005 ABC transporter NP095_07755 PF00664 ABC transporter transmembrane region NP095_07755 PF00005 ABC transporter NP095_07760 PF00448 SRP54-type protein, GTPase domain NP095_07760 PF02881 SRP54-type protein, helical bundle domain NP095_07770 PF00909 Ammonium Transporter Family NP095_07775 PF00543 Nitrogen regulatory protein P-II NP095_07780 PF08335 GlnD PII-uridylyltransferase NP095_07780 PF01909 Nucleotidyltransferase domain NP095_07780 PF01966 HD domain NP095_07785 PF00448 SRP54-type protein, GTPase domain NP095_07785 PF02881 SRP54-type protein, helical bundle domain NP095_07785 PF02978 Signal peptide binding domain NP095_07790 PF01202 Shikimate kinase NP095_07795 PF02447 GntP family permease NP095_07800 PF00664 ABC transporter transmembrane region NP095_07800 PF00005 ABC transporter NP095_07805 PF00005 ABC transporter NP095_07805 PF00664 ABC transporter transmembrane region NP095_07810 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NP095_07810 PF01926 50S ribosome-binding GTPase NP095_07815 PF04960 Glutaminase NP095_07820 PF02720 Domain of unknown function (DUF222) NP095_07825 PF00056 lactate/malate dehydrogenase, NAD binding domain NP095_07825 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NP095_07840 PF07722 Peptidase C26 NP095_07845 PF00571 CBS domain NP095_07845 PF03471 Transporter associated domain NP095_07845 PF01595 Cyclin M transmembrane N-terminal domain NP095_07850 PF00571 CBS domain NP095_07850 PF03471 Transporter associated domain NP095_07850 PF01595 Cyclin M transmembrane N-terminal domain NP095_07855 PF13520 Amino acid permease NP095_07860 PF00282 Pyridoxal-dependent decarboxylase conserved domain NP095_07870 PF01243 Pyridoxamine 5'-phosphate oxidase NP095_07875 PF00293 NUDIX domain NP095_07875 PF00300 Histidine phosphatase superfamily (branch 1) NP095_07890 PF00072 Response regulator receiver domain NP095_07890 PF00196 Bacterial regulatory proteins, luxR family NP095_07895 PF17655 Inward rectifier potassium channel C-terminal domain NP095_07895 PF07885 Ion channel NP095_07910 PF00535 Glycosyl transferase family 2 NP095_07915 PF03793 PASTA domain NP095_07915 PF00069 Protein kinase domain NP095_07920 PF01740 STAS domain NP095_07920 PF00916 Sulfate permease family NP095_07925 PF00248 Aldo/keto reductase family NP095_07935 PF00005 ABC transporter NP095_07945 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NP095_07945 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NP095_07950 PF00892 EamA-like transporter family NP095_07955 PF01551 Peptidase family M23 NP095_07960 PF04234 CopC domain NP095_07965 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) NP095_07965 PF05425 Copper resistance protein D NP095_07970 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NP095_07970 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NP095_07975 PF01066 CDP-alcohol phosphatidyltransferase NP095_07985 PF06947 Protein of unknown function (DUF1290) NP095_07995 PF01597 Glycine cleavage H-protein NP095_08000 PF00498 FHA domain NP095_08005 PF00376 MerR family regulatory protein NP095_08010 PF02577 Bifunctional nuclease NP095_08015 PF13411 MerR HTH family regulatory protein NP095_08020 PF02347 Glycine cleavage system P-protein NP095_08045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NP095_08045 PF10414 Sirohaem synthase dimerisation region NP095_08045 PF14824 Sirohaem biosynthesis protein central NP095_08050 PF01507 Phosphoadenosine phosphosulfate reductase family NP095_08060 PF01300 Telomere recombination NP095_08075 PF10099 Anti-sigma-K factor rskA NP095_08080 PF04542 Sigma-70 region 2 NP095_08080 PF04545 Sigma-70, region 4 NP095_08085 PF02469 Fasciclin domain NP095_08090 PF00174 Oxidoreductase molybdopterin binding domain NP095_08110 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NP095_08110 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain NP095_08125 PF01022 Bacterial regulatory protein, arsR family NP095_08130 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain NP095_08150 PF12697 Alpha/beta hydrolase family NP095_08155 PF17760 UvrA interaction domain NP095_08155 PF17755 UvrA DNA-binding domain NP095_08155 PF00005 ABC transporter NP095_08165 PF08281 Sigma-70, region 4 NP095_08165 PF04542 Sigma-70 region 2 NP095_08170 PF01329 Pterin 4 alpha carbinolamine dehydratase NP095_08175 PF01872 RibD C-terminal domain NP095_08180 PF00296 Luciferase-like monooxygenase NP095_08185 PF13443 Cro/C1-type HTH DNA-binding domain NP095_08210 PF00144 Beta-lactamase NP095_08215 PF00156 Phosphoribosyl transferase domain NP095_08225 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NP095_08240 PF13397 RNA polymerase-binding protein NP095_08245 PF00535 Glycosyl transferase family 2 NP095_08250 PF00795 Carbon-nitrogen hydrolase NP095_08255 PF00557 Metallopeptidase family M24 NP095_08255 PF01321 Creatinase/Prolidase N-terminal domain NP095_08260 PF04389 Peptidase family M28 NP095_08260 PF02225 PA domain NP095_08265 PF01367 5'-3' exonuclease, C-terminal SAM fold NP095_08265 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NP095_08270 PF00270 DEAD/DEAH box helicase NP095_08270 PF08148 DSHCT (NUC185) domain NP095_08270 PF00271 Helicase conserved C-terminal domain NP095_08275 PF00902 Sec-independent protein translocase protein (TatC) NP095_08280 PF02416 mttA/Hcf106 family NP095_08290 PF13280 WYL domain NP095_08300 PF03136 Pup-ligase protein NP095_08305 PF00227 Proteasome subunit NP095_08310 PF00227 Proteasome subunit NP095_08320 PF03136 Pup-ligase protein NP095_08330 PF00004 ATPase family associated with various cellular activities (AAA) NP095_08330 PF16450 Proteasomal ATPase OB C-terminal domain NP095_08330 PF17758 Proteasomal ATPase OB N-terminal domain NP095_08335 PF08704 tRNA methyltransferase complex GCD14 subunit NP095_08340 PF00571 CBS domain NP095_08340 PF02163 Peptidase family M50 NP095_08345 PF13419 Haloacid dehalogenase-like hydrolase NP095_08360 PF00004 ATPase family associated with various cellular activities (AAA) NP095_08360 PF07724 AAA domain (Cdc48 subfamily) NP095_08360 PF02861 Clp amino terminal domain, pathogenicity island component NP095_08360 PF10431 C-terminal, D2-small domain, of ClpB protein NP095_08360 PF17871 AAA lid domain NP095_08375 PF00069 Protein kinase domain NP095_08375 PF08239 Bacterial SH3 domain NP095_08420 PF01925 Sulfite exporter TauE/SafE NP095_08430 PF00689 Cation transporting ATPase, C-terminus NP095_08430 PF00690 Cation transporter/ATPase, N-terminus NP095_08435 PF07690 Major Facilitator Superfamily NP095_08440 PF02965 Vitamin B12 dependent methionine synthase, activation domain NP095_08440 PF02310 B12 binding domain NP095_08440 PF02607 B12 binding domain NP095_08440 PF00809 Pterin binding enzyme NP095_08440 PF02574 Homocysteine S-methyltransferase NP095_08450 PF01406 tRNA synthetases class I (C) catalytic domain NP095_08455 PF01544 CorA-like Mg2+ transporter protein NP095_08460 PF02673 Bacitracin resistance protein BacA NP095_08465 PF00248 Aldo/keto reductase family NP095_08475 PF03631 Virulence factor BrkB NP095_08495 PF07687 Peptidase dimerisation domain NP095_08495 PF01546 Peptidase family M20/M25/M40 NP095_08505 PF17871 AAA lid domain NP095_08505 PF07724 AAA domain (Cdc48 subfamily) NP095_08505 PF10431 C-terminal, D2-small domain, of ClpB protein NP095_08505 PF00004 ATPase family associated with various cellular activities (AAA) NP095_08520 PF01661 Macro domain NP095_08530 PF08338 Domain of unknown function (DUF1731) NP095_08530 PF01370 NAD dependent epimerase/dehydratase family NP095_08535 PF00877 NlpC/P60 family NP095_08540 PF00005 ABC transporter NP095_08545 PF00005 ABC transporter NP095_08545 PF12399 Branched-chain amino acid ATP-binding cassette transporter NP095_08555 PF02653 Branched-chain amino acid transport system / permease component NP095_08570 PF00176 SNF2 family N-terminal domain NP095_08570 PF00271 Helicase conserved C-terminal domain NP095_08570 PF04434 SWIM zinc finger NP095_08610 PF04286 Protein of unknown function (DUF445) NP095_08615 PF04228 Putative neutral zinc metallopeptidase NP095_08625 PF04408 Helicase associated domain (HA2) NP095_08625 PF00270 DEAD/DEAH box helicase NP095_08625 PF11898 Domain of unknown function (DUF3418) NP095_08625 PF00271 Helicase conserved C-terminal domain NP095_08625 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NP095_08635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP095_08640 PF00107 Zinc-binding dehydrogenase NP095_08640 PF13823 Alcohol dehydrogenase GroES-associated NP095_08640 PF08240 Alcohol dehydrogenase GroES-like domain NP095_08645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_08645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_08645 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_08655 PF01327 Polypeptide deformylase NP095_08660 PF00588 SpoU rRNA Methylase family NP095_08665 PF01161 Phosphatidylethanolamine-binding protein NP095_08680 PF01145 SPFH domain / Band 7 family NP095_08690 PF00005 ABC transporter NP095_08700 PF07311 Dodecin NP095_08720 PF12848 ABC transporter NP095_08720 PF16326 ABC transporter C-terminal domain NP095_08720 PF00005 ABC transporter NP095_08725 PF01883 Iron-sulfur cluster assembly protein NP095_08730 PF01592 NifU-like N terminal domain NP095_08735 PF00266 Aminotransferase class-V NP095_08740 PF00005 ABC transporter NP095_08745 PF00355 Rieske [2Fe-2S] domain NP095_08750 PF01458 Uncharacterized protein family (UPF0051) NP095_08755 PF01458 Uncharacterized protein family (UPF0051) NP095_08780 PF04679 ATP dependent DNA ligase C terminal region NP095_08780 PF01068 ATP dependent DNA ligase domain NP095_08785 PF00005 ABC transporter NP095_08785 PF13732 Domain of unknown function (DUF4162) NP095_08800 PF00583 Acetyltransferase (GNAT) family NP095_08810 PF01040 UbiA prenyltransferase family NP095_08815 PF02779 Transketolase, pyrimidine binding domain NP095_08815 PF02780 Transketolase, C-terminal domain NP095_08815 PF00456 Transketolase, thiamine diphosphate binding domain NP095_08820 PF00923 Transaldolase/Fructose-6-phosphate aldolase NP095_08825 PF00342 Phosphoglucose isomerase NP095_08830 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NP095_08830 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NP095_08840 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NP095_08850 PF03840 Preprotein translocase SecG subunit NP095_08855 PF00121 Triosephosphate isomerase NP095_08860 PF00162 Phosphoglycerate kinase NP095_08865 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NP095_08865 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NP095_08870 PF10298 WhiA N-terminal LAGLIDADG-like domain NP095_08870 PF14527 WhiA LAGLIDADG-like domain NP095_08870 PF02650 WhiA C-terminal HTH domain NP095_08875 PF01933 Uncharacterised protein family UPF0052 NP095_08880 PF03668 P-loop ATPase protein family NP095_08885 PF02151 UvrB/uvrC motif NP095_08885 PF01541 GIY-YIG catalytic domain NP095_08885 PF08459 UvrC Helix-hairpin-helix N-terminal NP095_08890 PF17760 UvrA interaction domain NP095_08890 PF00005 ABC transporter NP095_08890 PF17755 UvrA DNA-binding domain NP095_08895 PF00753 Metallo-beta-lactamase superfamily NP095_08900 PF00067 Cytochrome P450 NP095_08905 PF13520 Amino acid permease NP095_08910 PF03741 Integral membrane protein TerC family NP095_08915 PF17757 UvrB interaction domain NP095_08915 PF12344 Ultra-violet resistance protein B NP095_08915 PF00271 Helicase conserved C-terminal domain NP095_08915 PF04851 Type III restriction enzyme, res subunit NP095_08915 PF02151 UvrB/uvrC motif NP095_08925 PF00106 short chain dehydrogenase NP095_08935 PF02803 Thiolase, C-terminal domain NP095_08935 PF00108 Thiolase, N-terminal domain NP095_08960 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NP095_08960 PF02779 Transketolase, pyrimidine binding domain NP095_08960 PF02780 Transketolase, C-terminal domain NP095_08970 PF00694 Aconitase C-terminal domain NP095_08970 PF00330 Aconitase family (aconitate hydratase) NP095_08980 PF01938 TRAM domain NP095_08980 PF05958 tRNA (Uracil-5-)-methyltransferase NP095_08985 PF13520 Amino acid permease NP095_08990 PF02254 TrkA-N domain NP095_08990 PF02080 TrkA-C domain NP095_08995 PF02254 TrkA-N domain NP095_08995 PF02080 TrkA-C domain NP095_09015 PF00692 dUTPase NP095_09035 PF00459 Inositol monophosphatase family NP095_09040 PF00762 Ferrochelatase NP095_09055 PF00265 Thymidine kinase NP095_09060 PF01676 Metalloenzyme superfamily NP095_09070 PF00549 CoA-ligase NP095_09070 PF02629 CoA binding domain NP095_09075 PF00521 DNA gyrase/topoisomerase IV, subunit A NP095_09075 PF03989 DNA gyrase C-terminal domain, beta-propeller NP095_09085 PF07690 Major Facilitator Superfamily NP095_09090 PF00484 Carbonic anhydrase NP095_09095 PF00204 DNA gyrase B NP095_09095 PF00986 DNA gyrase B subunit, carboxyl terminus NP095_09095 PF01751 Toprim domain NP095_09095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP095_09110 PF00140 Sigma-70 factor, region 1.2 NP095_09110 PF04542 Sigma-70 region 2 NP095_09110 PF04539 Sigma-70 region 3 NP095_09110 PF04545 Sigma-70, region 4 NP095_09170 PF10502 Signal peptidase, peptidase S26 NP095_09185 PF00817 impB/mucB/samB family NP095_09185 PF11799 impB/mucB/samB family C-terminal domain NP095_09190 PF00326 Prolyl oligopeptidase family NP095_09190 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NP095_09195 PF04539 Sigma-70 region 3 NP095_09195 PF04545 Sigma-70, region 4 NP095_09195 PF00140 Sigma-70 factor, region 1.2 NP095_09195 PF04542 Sigma-70 region 2 NP095_09200 PF01121 Dephospho-CoA kinase NP095_09210 PF00501 AMP-binding enzyme NP095_09210 PF13193 AMP-binding enzyme C-terminal domain NP095_09215 PF12852 Cupin NP095_09215 PF12833 Helix-turn-helix domain NP095_09225 PF00575 S1 RNA binding domain NP095_09235 PF02127 Aminopeptidase I zinc metalloprotease (M18) NP095_09240 PF16363 GDP-mannose 4,6 dehydratase NP095_09245 PF08241 Methyltransferase domain NP095_09260 PF11271 Porin PorA NP095_09270 PF13580 SIS domain NP095_09275 PF00288 GHMP kinases N terminal domain NP095_09275 PF08544 GHMP kinases C terminal NP095_09280 PF01757 Acyltransferase family NP095_09285 PF11847 Alpha-(1->3)-arabinofuranosyltransferase NP095_09300 PF00534 Glycosyl transferases group 1 NP095_09300 PF13439 Glycosyltransferase Family 4 NP095_09305 PF00535 Glycosyl transferase family 2 NP095_09325 PF01757 Acyltransferase family NP095_09330 PF01757 Acyltransferase family NP095_09335 PF00483 Nucleotidyl transferase NP095_09345 PF01757 Acyltransferase family NP095_09355 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NP095_09355 PF01367 5'-3' exonuclease, C-terminal SAM fold NP095_09355 PF00476 DNA polymerase family A NP095_09365 PF02653 Branched-chain amino acid transport system / permease component NP095_09370 PF02653 Branched-chain amino acid transport system / permease component NP095_09370 PF11862 Domain of unknown function (DUF3382) NP095_09375 PF12399 Branched-chain amino acid ATP-binding cassette transporter NP095_09375 PF00005 ABC transporter NP095_09380 PF00005 ABC transporter NP095_09385 PF13458 Periplasmic binding protein NP095_09390 PF03861 ANTAR domain NP095_09390 PF00072 Response regulator receiver domain NP095_09400 PF00224 Pyruvate kinase, barrel domain NP095_09400 PF02887 Pyruvate kinase, alpha/beta domain NP095_09405 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP095_09405 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NP095_09410 PF01645 Conserved region in glutamate synthase NP095_09410 PF00310 Glutamine amidotransferases class-II NP095_09410 PF01493 GXGXG motif NP095_09410 PF04898 Glutamate synthase central domain NP095_09415 PF00919 Uncharacterized protein family UPF0004 NP095_09415 PF04055 Radical SAM superfamily NP095_09430 PF00005 ABC transporter NP095_09435 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP095_09440 PF00528 Binding-protein-dependent transport system inner membrane component NP095_09445 PF00528 Binding-protein-dependent transport system inner membrane component NP095_09450 PF01979 Amidohydrolase family NP095_09450 PF13382 Adenine deaminase C-terminal domain NP095_09460 PF02631 RecX family NP095_09465 PF00154 recA bacterial DNA recombination protein NP095_09470 PF01965 DJ-1/PfpI family NP095_09485 PF00994 Probable molybdopterin binding domain NP095_09485 PF18146 Damage-inducible protein CinA KH domain NP095_09485 PF02464 Competence-damaged protein NP095_09490 PF01066 CDP-alcohol phosphatidyltransferase NP095_09505 PF17854 FtsK alpha domain NP095_09505 PF09397 Ftsk gamma domain NP095_09505 PF01580 FtsK/SpoIIIE family NP095_09515 PF12706 Beta-lactamase superfamily domain NP095_09515 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NP095_09515 PF17770 Ribonuclease J C-terminal domain NP095_09520 PF00701 Dihydrodipicolinate synthetase family NP095_09535 PF00186 Dihydrofolate reductase NP095_09540 PF00303 Thymidylate synthase NP095_09565 PF05173 Dihydrodipicolinate reductase, C-terminus NP095_09565 PF01113 Dihydrodipicolinate reductase, N-terminus NP095_09570 PF00005 ABC transporter NP095_09570 PF17912 MalK OB fold domain NP095_09575 PF00356 Bacterial regulatory proteins, lacI family NP095_09580 PF00232 Glycosyl hydrolase family 1 NP095_09585 PF00528 Binding-protein-dependent transport system inner membrane component NP095_09590 PF00528 Binding-protein-dependent transport system inner membrane component NP095_09600 PF00013 KH domain NP095_09600 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NP095_09600 PF01138 3' exoribonuclease family, domain 1 NP095_09600 PF03725 3' exoribonuclease family, domain 2 NP095_09600 PF00575 S1 RNA binding domain NP095_09605 PF00312 Ribosomal protein S15 NP095_09610 PF06574 FAD synthetase NP095_09610 PF01687 Riboflavin kinase NP095_09615 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NP095_09635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NP095_09645 PF00072 Response regulator receiver domain NP095_09645 PF00486 Transcriptional regulatory protein, C terminal NP095_09650 PF13091 PLD-like domain NP095_09650 PF13396 Phospholipase_D-nuclease N-terminal NP095_09655 PF09142 tRNA Pseudouridine synthase II, C terminal NP095_09655 PF16198 tRNA pseudouridylate synthase B C-terminal domain NP095_09655 PF01509 TruB family pseudouridylate synthase (N terminal domain) NP095_09660 PF02033 Ribosome-binding factor A NP095_09665 PF00009 Elongation factor Tu GTP binding domain NP095_09665 PF04760 Translation initiation factor IF-2, N-terminal region NP095_09665 PF11987 Translation-initiation factor 2 NP095_09675 PF13184 NusA-like KH domain NP095_09675 PF08529 NusA N-terminal domain NP095_09680 PF17384 RimP C-terminal SH3 domain NP095_09680 PF02576 RimP N-terminal domain NP095_09705 PF04073 Aminoacyl-tRNA editing domain NP095_09705 PF03129 Anticodon binding domain NP095_09705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NP095_09720 PF04551 GcpE protein NP095_09725 PF17820 PDZ domain NP095_09725 PF02163 Peptidase family M50 NP095_09730 PF13288 DXP reductoisomerase C-terminal domain NP095_09730 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NP095_09730 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NP095_09740 PF00378 Enoyl-CoA hydratase/isomerase NP095_09750 PF00005 ABC transporter NP095_09760 PF00196 Bacterial regulatory proteins, luxR family NP095_09760 PF00072 Response regulator receiver domain NP095_09765 PF04055 Radical SAM superfamily NP095_09770 PF15887 Putative zinc-binding metallo-peptidase NP095_09770 PF10005 zinc-ribbon domain NP095_09775 PF08379 Bacterial transglutaminase-like N-terminal region NP095_09775 PF01841 Transglutaminase-like superfamily NP095_09780 PF04168 A predicted alpha-helical domain with a conserved ER motif. NP095_09780 PF14403 Circularly permuted ATP-grasp type 2 NP095_09790 PF01765 Ribosome recycling factor NP095_09795 PF00696 Amino acid kinase family NP095_09800 PF00889 Elongation factor TS NP095_09805 PF00318 Ribosomal protein S2 NP095_09810 PF01464 Transglycosylase SLT domain NP095_09810 PF10145 Phage-related minor tail protein NP095_09810 PF01551 Peptidase family M23 NP095_09815 PF02899 Phage integrase, N-terminal SAM-like domain NP095_09815 PF00589 Phage integrase family NP095_09820 PF00005 ABC transporter NP095_09820 PF03459 TOBE domain NP095_09825 PF00528 Binding-protein-dependent transport system inner membrane component NP095_09835 PF03459 TOBE domain NP095_09840 PF03453 MoeA N-terminal region (domain I and II) NP095_09840 PF03454 MoeA C-terminal region (domain IV) NP095_09840 PF00994 Probable molybdopterin binding domain NP095_09845 PF01967 MoaC family NP095_09850 PF00994 Probable molybdopterin binding domain NP095_09855 PF03848 Tellurite resistance protein TehB NP095_09860 PF17782 DprA winged helix domain NP095_09860 PF02481 DNA recombination-mediator protein A NP095_09865 PF01078 Magnesium chelatase, subunit ChlI NP095_09865 PF13335 Magnesium chelatase, subunit ChlI C-terminal NP095_09870 PF02021 Uncharacterised protein family UPF0102 NP095_09880 PF10611 Protein of unknown function (DUF2469) NP095_09885 PF01351 Ribonuclease HII NP095_09890 PF10502 Signal peptidase, peptidase S26 NP095_09895 PF10502 Signal peptidase, peptidase S26 NP095_09900 PF01245 Ribosomal protein L19 NP095_09905 PF00909 Ammonium Transporter Family NP095_09915 PF01746 tRNA (Guanine-1)-methyltransferase NP095_09920 PF01782 RimM N-terminal domain NP095_09920 PF05239 PRC-barrel domain NP095_09930 PF00886 Ribosomal protein S16 NP095_09935 PF02224 Cytidylate kinase NP095_09940 PF02153 Prephenate dehydrogenase NP095_09945 PF00849 RNA pseudouridylate synthase NP095_09945 PF01479 S4 domain NP095_09950 PF04079 Segregation and condensation complex subunit ScpB NP095_09955 PF02616 Segregation and condensation protein ScpA NP095_09965 PF13614 AAA domain NP095_09970 PF02899 Phage integrase, N-terminal SAM-like domain NP095_09970 PF00589 Phage integrase family NP095_09975 PF00293 NUDIX domain NP095_09980 PF00117 Glutamine amidotransferase class-I NP095_09980 PF06418 CTP synthase N-terminus NP095_09995 PF02463 RecF/RecN/SMC N terminal domain NP095_10000 PF01513 ATP-NAD kinase NP095_10005 PF01728 FtsJ-like methyltransferase NP095_10005 PF01479 S4 domain NP095_10015 PF18407 GCN5-related N-acetyltransferase like domain NP095_10015 PF13344 Haloacid dehalogenase-like hydrolase NP095_10045 PF00579 tRNA synthetases class I (W and Y) NP095_10055 PF00582 Universal stress protein family NP095_10070 PF02245 Methylpurine-DNA glycosylase (MPG) NP095_10080 PF13472 GDSL-like Lipase/Acylhydrolase family NP095_10090 PF00206 Lyase NP095_10090 PF14698 Argininosuccinate lyase C-terminal NP095_10095 PF01316 Arginine repressor, DNA binding domain NP095_10095 PF02863 Arginine repressor, C-terminal domain NP095_10100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NP095_10100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NP095_10105 PF00202 Aminotransferase class-III NP095_10110 PF00696 Amino acid kinase family NP095_10115 PF01960 ArgJ family NP095_10120 PF02774 Semialdehyde dehydrogenase, dimerisation domain NP095_10120 PF01118 Semialdehyde dehydrogenase, NAD binding domain NP095_10125 PF00764 Arginosuccinate synthase NP095_10135 PF04011 LemA family NP095_10140 PF01063 Amino-transferase class IV NP095_10145 PF00180 Isocitrate/isopropylmalate dehydrogenase NP095_10170 PF00155 Aminotransferase class I and II NP095_10170 PF00392 Bacterial regulatory proteins, gntR family NP095_10175 PF13520 Amino acid permease NP095_10180 PF00582 Universal stress protein family NP095_10185 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NP095_10185 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NP095_10190 PF10369 Small subunit of acetolactate synthase NP095_10195 PF00205 Thiamine pyrophosphate enzyme, central domain NP095_10195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NP095_10195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP095_10205 PF00106 short chain dehydrogenase NP095_10210 PF01757 Acyltransferase family NP095_10215 PF00920 Dehydratase family NP095_10230 PF01734 Patatin-like phospholipase NP095_10245 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NP095_10260 PF02720 Domain of unknown function (DUF222) NP095_10265 PF02637 GatB domain NP095_10265 PF02934 GatB/GatE catalytic domain NP095_10270 PF01425 Amidase NP095_10275 PF02686 Glu-tRNAGln amidotransferase C subunit NP095_10285 PF00533 BRCA1 C Terminus (BRCT) domain NP095_10285 PF03120 NAD-dependent DNA ligase OB-fold domain NP095_10285 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NP095_10285 PF12826 Helix-hairpin-helix motif NP095_10285 PF01653 NAD-dependent DNA ligase adenylation domain NP095_10300 PF00583 Acetyltransferase (GNAT) family NP095_10315 PF00266 Aminotransferase class-V NP095_10355 PF00437 Type II/IV secretion system protein NP095_10370 PF01580 FtsK/SpoIIIE family NP095_10370 PF12538 DNA transporter NP095_10410 PF00266 Aminotransferase class-V NP095_10415 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NP095_10415 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NP095_10420 PF02910 Fumarate reductase flavoprotein C-term NP095_10420 PF00890 FAD binding domain NP095_10425 PF02445 Quinolinate synthetase A protein NP095_10435 PF07733 Bacterial DNA polymerase III alpha NTPase domain NP095_10435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NP095_10435 PF14579 Helix-hairpin-helix motif NP095_10435 PF02811 PHP domain NP095_10460 PF00005 ABC transporter NP095_10460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP095_10465 PF00528 Binding-protein-dependent transport system inner membrane component NP095_10465 PF12911 N-terminal TM domain of oligopeptide transport permease C NP095_10470 PF00528 Binding-protein-dependent transport system inner membrane component NP095_10480 PF01012 Electron transfer flavoprotein domain NP095_10480 PF00766 Electron transfer flavoprotein FAD-binding domain NP095_10485 PF01012 Electron transfer flavoprotein domain NP095_10490 PF00378 Enoyl-CoA hydratase/isomerase NP095_10500 PF00293 NUDIX domain NP095_10505 PF00085 Thioredoxin NP095_10525 PF00108 Thiolase, N-terminal domain NP095_10525 PF02803 Thiolase, C-terminal domain NP095_10530 PF12900 Pyridoxamine 5'-phosphate oxidase NP095_10540 PF08240 Alcohol dehydrogenase GroES-like domain NP095_10540 PF00107 Zinc-binding dehydrogenase NP095_10560 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NP095_10560 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NP095_10570 PF01939 Endonuclease NucS NP095_10585 PF00210 Ferritin-like domain NP095_10595 PF02310 B12 binding domain NP095_10595 PF01642 Methylmalonyl-CoA mutase NP095_10600 PF01923 Cobalamin adenosyltransferase NP095_10615 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NP095_10620 PF02874 ATP synthase alpha/beta family, beta-barrel domain NP095_10620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NP095_10625 PF00231 ATP synthase NP095_10630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NP095_10630 PF00306 ATP synthase alpha/beta chain, C terminal domain NP095_10630 PF02874 ATP synthase alpha/beta family, beta-barrel domain NP095_10635 PF00213 ATP synthase delta (OSCP) subunit NP095_10640 PF00430 ATP synthase B/B' CF(0) NP095_10645 PF00137 ATP synthase subunit C NP095_10650 PF00119 ATP synthase A chain NP095_10660 PF00953 Glycosyl transferase family 4 NP095_10665 PF01300 Telomere recombination NP095_10675 PF13649 Methyltransferase domain NP095_10675 PF17827 PrmC N-terminal domain NP095_10680 PF03462 PCRF domain NP095_10680 PF00472 RF-1 domain NP095_10685 PF01197 Ribosomal protein L31 NP095_10695 PF00255 Glutathione peroxidase NP095_10700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NP095_10700 PF07498 Rho termination factor, N-terminal domain NP095_10700 PF07497 Rho termination factor, RNA-binding domain NP095_10705 PF00288 GHMP kinases N terminal domain NP095_10705 PF08544 GHMP kinases C terminal NP095_10710 PF00291 Pyridoxal-phosphate dependent enzyme NP095_10715 PF01842 ACT domain NP095_10715 PF00742 Homoserine dehydrogenase NP095_10715 PF03447 Homoserine dehydrogenase, NAD binding domain NP095_10720 PF06826 Predicted Permease Membrane Region NP095_10720 PF02080 TrkA-C domain NP095_10730 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NP095_10730 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NP095_10735 PF05746 DALR anticodon binding domain NP095_10735 PF00750 tRNA synthetases class I (R) NP095_10735 PF03485 Arginyl tRNA synthetase N terminal domain NP095_10740 PF00072 Response regulator receiver domain NP095_10760 PF16995 Transmembrane region of lysyl-tRNA synthetase NP095_10760 PF09924 Uncharacterised conserved protein (DUF2156) NP095_10760 PF00152 tRNA synthetases class II (D, K and N) NP095_10760 PF01336 OB-fold nucleic acid binding domain NP095_10795 PF13847 Methyltransferase domain NP095_10800 PF02779 Transketolase, pyrimidine binding domain NP095_10800 PF02780 Transketolase, C-terminal domain NP095_10805 PF16123 Hydroxyacylglutathione hydrolase C-terminus NP095_10805 PF00753 Metallo-beta-lactamase superfamily NP095_10810 PF02566 OsmC-like protein NP095_10815 PF16078 2-oxoglutarate dehydrogenase N-terminus NP095_10815 PF00676 Dehydrogenase E1 component NP095_10815 PF16870 2-oxoglutarate dehydrogenase C-terminal NP095_10815 PF02779 Transketolase, pyrimidine binding domain NP095_10815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NP095_10835 PF08240 Alcohol dehydrogenase GroES-like domain NP095_10835 PF00107 Zinc-binding dehydrogenase NP095_10840 PF00390 Malic enzyme, N-terminal domain NP095_10840 PF03949 Malic enzyme, NAD binding domain NP095_10850 PF02467 Transcription factor WhiB NP095_10855 PF12282 Signal transduction histidine kinase NP095_10855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP095_10855 PF07568 Histidine kinase NP095_10860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP095_10860 PF00205 Thiamine pyrophosphate enzyme, central domain NP095_10860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NP095_10875 PF04542 Sigma-70 region 2 NP095_10875 PF08281 Sigma-70, region 4 NP095_10880 PF02586 SOS response associated peptidase (SRAP) NP095_10900 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NP095_10905 PF03193 RsgA GTPase NP095_10910 PF00459 Inositol monophosphatase family NP095_10915 PF00571 CBS domain NP095_10925 PF03462 PCRF domain NP095_10925 PF00472 RF-1 domain NP095_10930 PF13091 PLD-like domain NP095_10930 PF13396 Phospholipase_D-nuclease N-terminal NP095_10935 PF00188 Cysteine-rich secretory protein family NP095_10960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_10960 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_10960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_10965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NP095_10965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NP095_10970 PF13823 Alcohol dehydrogenase GroES-associated NP095_10970 PF08240 Alcohol dehydrogenase GroES-like domain NP095_10970 PF00107 Zinc-binding dehydrogenase NP095_10990 PF01774 UreD urease accessory protein NP095_10995 PF02492 CobW/HypB/UreG, nucleotide-binding domain NP095_11005 PF01979 Amidohydrolase family NP095_11005 PF00449 Urease alpha-subunit, N-terminal domain NP095_11010 PF00699 Urease beta subunit NP095_11015 PF00547 Urease, gamma subunit NP095_11020 PF00005 ABC transporter NP095_11025 PF12399 Branched-chain amino acid ATP-binding cassette transporter NP095_11025 PF00005 ABC transporter NP095_11035 PF02653 Branched-chain amino acid transport system / permease component NP095_11055 PF00005 ABC transporter NP095_11055 PF00664 ABC transporter transmembrane region NP095_11060 PF03458 UPF0126 domain NP095_11075 PF02423 Ornithine cyclodeaminase/mu-crystallin family NP095_11090 PF07690 Major Facilitator Superfamily NP095_11100 PF09278 MerR, DNA binding NP095_11100 PF00376 MerR family regulatory protein NP095_11105 PF01642 Methylmalonyl-CoA mutase NP095_11105 PF02310 B12 binding domain NP095_11115 PF13476 AAA domain NP095_11120 PF00149 Calcineurin-like phosphoesterase NP095_11120 PF12320 Type 5 capsule protein repressor C-terminal domain NP095_11145 PF00501 AMP-binding enzyme NP095_11145 PF13193 AMP-binding enzyme C-terminal domain NP095_11155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_11155 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_11155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_11160 PF00106 short chain dehydrogenase NP095_11175 PF05175 Methyltransferase small domain NP095_11175 PF17827 PrmC N-terminal domain NP095_11200 PF01266 FAD dependent oxidoreductase NP095_11210 PF04542 Sigma-70 region 2 NP095_11210 PF04539 Sigma-70 region 3 NP095_11210 PF04545 Sigma-70, region 4 NP095_11220 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NP095_11220 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NP095_11240 PF02709 N-terminal domain of galactosyltransferase NP095_11240 PF00535 Glycosyl transferase family 2 NP095_11250 PF13439 Glycosyltransferase Family 4 NP095_11250 PF00534 Glycosyl transferases group 1 NP095_11260 PF00199 Catalase NP095_11260 PF06628 Catalase-related immune-responsive NP095_11260 PF18011 C-terminal domain found in long catalases NP095_11270 PF02583 Metal-sensitive transcriptional repressor NP095_11275 PF02627 Carboxymuconolactone decarboxylase family NP095_11285 PF04107 Glutamate-cysteine ligase family 2(GCS2) NP095_11290 PF00107 Zinc-binding dehydrogenase NP095_11290 PF13823 Alcohol dehydrogenase GroES-associated NP095_11290 PF08240 Alcohol dehydrogenase GroES-like domain NP095_11300 PF00005 ABC transporter NP095_11305 PF00072 Response regulator receiver domain NP095_11305 PF00196 Bacterial regulatory proteins, luxR family NP095_11340 PF00107 Zinc-binding dehydrogenase NP095_11340 PF08240 Alcohol dehydrogenase GroES-like domain NP095_11340 PF13823 Alcohol dehydrogenase GroES-associated NP095_11355 PF12680 SnoaL-like domain NP095_11355 PF08281 Sigma-70, region 4 NP095_11355 PF04542 Sigma-70 region 2 NP095_11400 PF05199 GMC oxidoreductase NP095_11420 PF03109 ABC1 family NP095_11425 PF07690 Major Facilitator Superfamily NP095_11435 PF01593 Flavin containing amine oxidoreductase NP095_11450 PF00248 Aldo/keto reductase family NP095_11455 PF00296 Luciferase-like monooxygenase NP095_11460 PF00005 ABC transporter NP095_11465 PF00528 Binding-protein-dependent transport system inner membrane component NP095_11470 PF09084 NMT1/THI5 like NP095_11475 PF00296 Luciferase-like monooxygenase NP095_11480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NP095_11480 PF00205 Thiamine pyrophosphate enzyme, central domain NP095_11480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP095_11505 PF00561 alpha/beta hydrolase fold NP095_11510 PF03793 PASTA domain NP095_11510 PF00069 Protein kinase domain NP095_11520 PF00005 ABC transporter NP095_11520 PF13732 Domain of unknown function (DUF4162) NP095_11530 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NP095_11530 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NP095_11555 PF00171 Aldehyde dehydrogenase family NP095_11560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP095_11560 PF03466 LysR substrate binding domain NP095_11565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP095_11565 PF00205 Thiamine pyrophosphate enzyme, central domain NP095_11565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NP095_11570 PF03129 Anticodon binding domain NP095_11570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NP095_11570 PF04073 Aminoacyl-tRNA editing domain NP095_11575 PF03699 Uncharacterised protein family (UPF0182) NP095_11585 PF13180 PDZ domain NP095_11585 PF05362 Lon protease (S16) C-terminal proteolytic domain NP095_11615 PF03109 ABC1 family NP095_11620 PF13361 UvrD-like helicase C-terminal domain NP095_11620 PF00570 HRDC domain NP095_11620 PF00580 UvrD/REP helicase N-terminal domain NP095_11625 PF00462 Glutaredoxin NP095_11640 PF09297 NADH pyrophosphatase zinc ribbon domain NP095_11640 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NP095_11640 PF00293 NUDIX domain NP095_11645 PF00580 UvrD/REP helicase N-terminal domain NP095_11645 PF13361 UvrD-like helicase C-terminal domain NP095_11650 PF13361 UvrD-like helicase C-terminal domain NP095_11650 PF00580 UvrD/REP helicase N-terminal domain NP095_11660 PF00899 ThiF family NP095_11660 PF00581 Rhodanese-like domain NP095_11665 PF00440 Bacterial regulatory proteins, tetR family NP095_11680 PF00270 DEAD/DEAH box helicase NP095_11680 PF00271 Helicase conserved C-terminal domain NP095_11690 PF13614 AAA domain NP095_11725 PF02811 PHP domain NP095_11730 PF00300 Histidine phosphatase superfamily (branch 1) NP095_11735 PF01575 MaoC like domain NP095_11750 PF00534 Glycosyl transferases group 1 NP095_11770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_11770 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_11770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_11780 PF01769 Divalent cation transporter NP095_11780 PF00571 CBS domain NP095_11780 PF03448 MgtE intracellular N domain NP095_11790 PF10609 NUBPL iron-transfer P-loop NTPase NP095_11790 PF01883 Iron-sulfur cluster assembly protein NP095_11795 PF02416 mttA/Hcf106 family NP095_11800 PF08281 Sigma-70, region 4 NP095_11800 PF04542 Sigma-70 region 2 NP095_11805 PF01596 O-methyltransferase NP095_11830 PF07687 Peptidase dimerisation domain NP095_11830 PF01546 Peptidase family M20/M25/M40 NP095_11840 PF00005 ABC transporter NP095_11840 PF02687 FtsX-like permease family NP095_11840 PF12704 MacB-like periplasmic core domain NP095_11845 PF00005 ABC transporter NP095_11845 PF02687 FtsX-like permease family NP095_11845 PF12704 MacB-like periplasmic core domain NP095_11855 PF01725 Ham1 family NP095_11860 PF01138 3' exoribonuclease family, domain 1 NP095_11860 PF03725 3' exoribonuclease family, domain 2 NP095_11865 PF05547 Immune inhibitor A peptidase M6 NP095_11865 PF00801 PKD domain NP095_11870 PF12706 Beta-lactamase superfamily domain NP095_11875 PF01177 Asp/Glu/Hydantoin racemase NP095_11880 PF00232 Glycosyl hydrolase family 1 NP095_11890 PF02566 OsmC-like protein NP095_11895 PF01047 MarR family NP095_11900 PF14572 Phosphoribosyl synthetase-associated domain NP095_11900 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NP095_11905 PF00291 Pyridoxal-phosphate dependent enzyme NP095_11910 PF02597 ThiS family NP095_11915 PF14464 Prokaryotic homologs of the JAB domain NP095_11925 PF02617 ATP-dependent Clp protease adaptor protein ClpS NP095_11930 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NP095_11930 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NP095_11935 PF00857 Isochorismatase family NP095_11940 PF00296 Luciferase-like monooxygenase NP095_11955 PF07859 alpha/beta hydrolase fold NP095_11960 PF04851 Type III restriction enzyme, res subunit NP095_11970 PF02622 Uncharacterized ACR, COG1678 NP095_11985 PF00270 DEAD/DEAH box helicase NP095_11985 PF08494 DEAD/H associated NP095_11985 PF00271 Helicase conserved C-terminal domain NP095_11990 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NP095_11990 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NP095_12000 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NP095_12000 PF01266 FAD dependent oxidoreductase NP095_12005 PF00743 Flavin-binding monooxygenase-like NP095_12030 PF00437 Type II/IV secretion system protein NP095_12035 PF10609 NUBPL iron-transfer P-loop NTPase NP095_12070 PF00313 'Cold-shock' DNA-binding domain NP095_12080 PF01243 Pyridoxamine 5'-phosphate oxidase NP095_12085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NP095_12100 PF01668 SmpB protein NP095_12105 PF08460 Bacterial SH3 domain NP095_12105 PF01551 Peptidase family M23 NP095_12110 PF18075 FtsX extracellular domain NP095_12110 PF02687 FtsX-like permease family NP095_12115 PF00005 ABC transporter NP095_12120 PF04261 Dyp-type peroxidase family NP095_12120 PF10518 TAT (twin-arginine translocation) pathway signal sequence NP095_12125 PF04314 Copper chaperone PCu(A)C NP095_12130 PF04055 Radical SAM superfamily NP095_12135 PF00743 Flavin-binding monooxygenase-like NP095_12140 PF01983 Guanylyl transferase CofC like NP095_12150 PF01933 Uncharacterised protein family UPF0052 NP095_12155 PF01996 F420-0:Gamma-glutamyl ligase NP095_12155 PF00881 Nitroreductase family NP095_12160 PF03462 PCRF domain NP095_12160 PF00472 RF-1 domain NP095_12170 PF00245 Alkaline phosphatase NP095_12195 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NP095_12205 PF11774 Lsr2 NP095_12240 PF00437 Type II/IV secretion system protein NP095_12265 PF00924 Mechanosensitive ion channel NP095_12270 PF01152 Bacterial-like globin NP095_12280 PF00364 Biotin-requiring enzyme NP095_12285 PF01039 Carboxyl transferase domain NP095_12310 PF01648 4'-phosphopantetheinyl transferase superfamily NP095_12315 PF01575 MaoC like domain NP095_12325 PF02803 Thiolase, C-terminal domain NP095_12325 PF00108 Thiolase, N-terminal domain NP095_12330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_12330 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_12330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_12340 PF04264 YceI-like domain NP095_12345 PF01047 MarR family NP095_12350 PF00005 ABC transporter NP095_12350 PF12848 ABC transporter NP095_12360 PF00350 Dynamin family NP095_12365 PF03966 Trm112p-like protein NP095_12385 PF00534 Glycosyl transferases group 1 NP095_12385 PF00535 Glycosyl transferase family 2 NP095_12390 PF02467 Transcription factor WhiB NP095_12405 PF00005 ABC transporter NP095_12405 PF01476 LysM domain NP095_12420 PF03816 Cell envelope-related transcriptional attenuator domain NP095_12450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_12450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_12450 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_12465 PF00731 AIR carboxylase NP095_12470 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NP095_12470 PF02222 ATP-grasp domain NP095_12475 PF00211 Adenylate and Guanylate cyclase catalytic domain NP095_12475 PF16701 Adenylate cyclase regulatory domain NP095_12495 PF01039 Carboxyl transferase domain NP095_12510 PF02545 Maf-like protein NP095_12535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_12535 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_12535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_12540 PF00364 Biotin-requiring enzyme NP095_12540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NP095_12540 PF00289 Biotin carboxylase, N-terminal domain NP095_12540 PF02785 Biotin carboxylase C-terminal domain NP095_12550 PF08486 Stage II sporulation protein NP095_12555 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP095_12555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NP095_12560 PF01126 Heme oxygenase NP095_12565 PF00005 ABC transporter NP095_12570 PF01032 FecCD transport family NP095_12575 PF01497 Periplasmic binding protein NP095_12595 PF01048 Phosphorylase superfamily NP095_12600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NP095_12600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NP095_12600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NP095_12600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NP095_12605 PF00480 ROK family NP095_12610 PF00456 Transketolase, thiamine diphosphate binding domain NP095_12610 PF02780 Transketolase, C-terminal domain NP095_12610 PF02779 Transketolase, pyrimidine binding domain NP095_12615 PF01791 DeoC/LacD family aldolase NP095_12620 PF00171 Aldehyde dehydrogenase family NP095_12625 PF00171 Aldehyde dehydrogenase family NP095_12635 PF00962 Adenosine/AMP deaminase NP095_12640 PF01575 MaoC like domain NP095_12645 PF02885 Glycosyl transferase family, helical bundle domain NP095_12645 PF00591 Glycosyl transferase family, a/b domain NP095_12645 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NP095_12650 PF00067 Cytochrome P450 NP095_12655 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NP095_12660 PF02653 Branched-chain amino acid transport system / permease component NP095_12665 PF02653 Branched-chain amino acid transport system / permease component NP095_12670 PF00005 ABC transporter NP095_12675 PF02608 ABC transporter substrate-binding protein PnrA-like NP095_12685 PF04107 Glutamate-cysteine ligase family 2(GCS2) NP095_12685 PF01546 Peptidase family M20/M25/M40 NP095_12705 PF01047 MarR family NP095_12715 PF13085 2Fe-2S iron-sulfur cluster binding domain NP095_12715 PF13183 4Fe-4S dicluster domain NP095_12720 PF00890 FAD binding domain NP095_12720 PF02910 Fumarate reductase flavoprotein C-term NP095_12730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP095_12730 PF03466 LysR substrate binding domain NP095_12740 PF00579 tRNA synthetases class I (W and Y) NP095_12745 PF10509 Galactokinase galactose-binding signature NP095_12745 PF08544 GHMP kinases C terminal NP095_12745 PF00288 GHMP kinases N terminal domain NP095_12750 PF00800 Prephenate dehydratase NP095_12760 PF07690 Major Facilitator Superfamily NP095_12765 PF03971 Monomeric isocitrate dehydrogenase NP095_12775 PF00528 Binding-protein-dependent transport system inner membrane component NP095_12780 PF00528 Binding-protein-dependent transport system inner membrane component NP095_12785 PF00005 ABC transporter NP095_12785 PF12857 TOBE-like domain NP095_12790 PF07690 Major Facilitator Superfamily NP095_12805 PF03009 Glycerophosphoryl diester phosphodiesterase family NP095_12830 PF00072 Response regulator receiver domain NP095_12830 PF00196 Bacterial regulatory proteins, luxR family NP095_12840 PF00580 UvrD/REP helicase N-terminal domain NP095_12840 PF13361 UvrD-like helicase C-terminal domain NP095_12850 PF08442 ATP-grasp domain NP095_12850 PF00549 CoA-ligase NP095_12855 PF00549 CoA-ligase NP095_12855 PF02629 CoA binding domain NP095_12870 PF00551 Formyl transferase NP095_12875 PF02142 MGS-like domain NP095_12875 PF01808 AICARFT/IMPCHase bienzyme NP095_12890 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NP095_12890 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NP095_12900 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NP095_12900 PF00056 lactate/malate dehydrogenase, NAD binding domain NP095_12910 PF00117 Glutamine amidotransferase class-I NP095_12910 PF00958 GMP synthase C terminal domain NP095_12910 PF02540 NAD synthase NP095_12915 PF00571 CBS domain NP095_12915 PF01595 Cyclin M transmembrane N-terminal domain NP095_12920 PF01595 Cyclin M transmembrane N-terminal domain NP095_12920 PF00571 CBS domain NP095_12920 PF03471 Transporter associated domain NP095_12935 PF01741 Large-conductance mechanosensitive channel, MscL NP095_12955 PF00999 Sodium/hydrogen exchanger family NP095_12970 PF18357 Diphteria toxin repressor SH3 domain NP095_12970 PF02742 Iron dependent repressor, metal binding and dimerisation domain NP095_12970 PF01325 Iron dependent repressor, N-terminal DNA binding domain NP095_12975 PF00875 DNA photolyase NP095_12975 PF03441 FAD binding domain of DNA photolyase NP095_12985 PF05977 Transmembrane secretion effector NP095_12990 PF01243 Pyridoxamine 5'-phosphate oxidase NP095_12990 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NP095_12995 PF00285 Citrate synthase, C-terminal domain NP095_13000 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NP095_13005 PF01757 Acyltransferase family NP095_13010 PF08379 Bacterial transglutaminase-like N-terminal region NP095_13010 PF01841 Transglutaminase-like superfamily NP095_13025 PF02310 B12 binding domain NP095_13025 PF01642 Methylmalonyl-CoA mutase NP095_13030 PF01642 Methylmalonyl-CoA mutase NP095_13035 PF00266 Aminotransferase class-V NP095_13040 PF00132 Bacterial transferase hexapeptide (six repeats) NP095_13055 PF11228 Protein of unknown function (DUF3027) NP095_13065 PF00313 'Cold-shock' DNA-binding domain NP095_13080 PF13193 AMP-binding enzyme C-terminal domain NP095_13080 PF00501 AMP-binding enzyme NP095_13090 PF01925 Sulfite exporter TauE/SafE NP095_13095 PF01507 Phosphoadenosine phosphosulfate reductase family NP095_13100 PF00009 Elongation factor Tu GTP binding domain NP095_13110 PF02397 Bacterial sugar transferase NP095_13120 PF00118 TCP-1/cpn60 chaperonin family NP095_13125 PF00313 'Cold-shock' DNA-binding domain NP095_13130 PF02597 ThiS family NP095_13155 PF00982 Glycosyltransferase family 20 NP095_13165 PF00282 Pyridoxal-dependent decarboxylase conserved domain NP095_13180 PF07690 Major Facilitator Superfamily NP095_13185 PF03167 Uracil DNA glycosylase superfamily NP095_13190 PF01594 AI-2E family transporter NP095_13195 PF00551 Formyl transferase NP095_13230 PF01565 FAD binding domain NP095_13230 PF04030 D-arabinono-1,4-lactone oxidase NP095_13235 PF00588 SpoU rRNA Methylase family NP095_13235 PF08032 RNA 2'-O ribose methyltransferase substrate binding NP095_13240 PF09190 DALR domain NP095_13240 PF01406 tRNA synthetases class I (C) catalytic domain NP095_13250 PF02542 YgbB family NP095_13265 PF02559 CarD-like/TRCF domain NP095_13275 PF01895 PhoU domain NP095_13280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP095_13280 PF00512 His Kinase A (phospho-acceptor) domain NP095_13285 PF00486 Transcriptional regulatory protein, C terminal NP095_13285 PF00072 Response regulator receiver domain NP095_13290 PF00300 Histidine phosphatase superfamily (branch 1) NP095_13300 PF10722 Putative bacterial sensory transduction regulator NP095_13305 PF13439 Glycosyltransferase Family 4 NP095_13305 PF00534 Glycosyl transferases group 1 NP095_13310 PF00106 short chain dehydrogenase NP095_13320 PF04116 Fatty acid hydroxylase superfamily NP095_13325 PF00106 short chain dehydrogenase NP095_13330 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NP095_13330 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NP095_13350 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP095_13360 PF03176 MMPL family NP095_13370 PF02769 AIR synthase related protein, C-terminal domain NP095_13370 PF00586 AIR synthase related protein, N-terminal domain NP095_13375 PF00156 Phosphoribosyl transferase domain NP095_13380 PF00501 AMP-binding enzyme NP095_13380 PF13193 AMP-binding enzyme C-terminal domain NP095_13385 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NP095_13395 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NP095_13400 PF16363 GDP-mannose 4,6 dehydratase NP095_13405 PF00483 Nucleotidyl transferase NP095_13410 PF00535 Glycosyl transferase family 2 NP095_13410 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NP095_13415 PF00535 Glycosyl transferase family 2 NP095_13415 PF01501 Glycosyl transferase family 8 NP095_13420 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NP095_13425 PF09318 Glycosyl transferase 1 domain A NP095_13425 PF00534 Glycosyl transferases group 1 NP095_13440 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NP095_13445 PF02152 Dihydroneopterin aldolase NP095_13455 PF00809 Pterin binding enzyme NP095_13460 PF01227 GTP cyclohydrolase I NP095_13465 PF06480 FtsH Extracellular NP095_13465 PF17862 AAA+ lid domain NP095_13465 PF00004 ATPase family associated with various cellular activities (AAA) NP095_13465 PF01434 Peptidase family M41 NP095_13470 PF00156 Phosphoribosyl transferase domain NP095_13475 PF01171 PP-loop family NP095_13475 PF09179 TilS substrate binding domain NP095_13490 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NP095_13495 PF00719 Inorganic pyrophosphatase NP095_13500 PF00440 Bacterial regulatory proteins, tetR family NP095_13510 PF02277 Phosphoribosyltransferase NP095_13515 PF02654 Cobalamin-5-phosphate synthase NP095_13520 PF03352 Methyladenine glycosylase NP095_13525 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NP095_13540 PF00005 ABC transporter NP095_13585 PF01032 FecCD transport family NP095_13590 PF01032 FecCD transport family NP095_13595 PF00005 ABC transporter NP095_13605 PF00378 Enoyl-CoA hydratase/isomerase NP095_13615 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP095_13625 PF10431 C-terminal, D2-small domain, of ClpB protein NP095_13625 PF02861 Clp amino terminal domain, pathogenicity island component NP095_13625 PF00004 ATPase family associated with various cellular activities (AAA) NP095_13625 PF07724 AAA domain (Cdc48 subfamily) NP095_13625 PF17871 AAA lid domain NP095_13630 PF03611 PTS system sugar-specific permease component NP095_13635 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NP095_13640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NP095_13655 PF00743 Flavin-binding monooxygenase-like NP095_13660 PF08240 Alcohol dehydrogenase GroES-like domain NP095_13660 PF00107 Zinc-binding dehydrogenase NP095_13670 PF08241 Methyltransferase domain NP095_13675 PF13439 Glycosyltransferase Family 4 NP095_13675 PF00534 Glycosyl transferases group 1 NP095_13685 PF00042 Globin NP095_13685 PF00970 Oxidoreductase FAD-binding domain NP095_13685 PF00175 Oxidoreductase NAD-binding domain NP095_13710 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP095_13720 PF01638 HxlR-like helix-turn-helix NP095_13725 PF08241 Methyltransferase domain NP095_13735 PF00149 Calcineurin-like phosphoesterase NP095_13735 PF02872 5'-nucleotidase, C-terminal domain NP095_13745 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NP095_13745 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NP095_13755 PF02574 Homocysteine S-methyltransferase NP095_13760 PF00501 AMP-binding enzyme NP095_13760 PF13193 AMP-binding enzyme C-terminal domain NP095_13775 PF00311 Phosphoenolpyruvate carboxylase NP095_13785 PF01447 Thermolysin metallopeptidase, catalytic domain NP095_13785 PF02868 Thermolysin metallopeptidase, alpha-helical domain NP095_13785 PF16485 Protealysin propeptide NP095_13790 PF00296 Luciferase-like monooxygenase NP095_13795 PF03328 HpcH/HpaI aldolase/citrate lyase family NP095_13800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_13800 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_13800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_13805 PF02515 CoA-transferase family III NP095_13815 PF00392 Bacterial regulatory proteins, gntR family NP095_13815 PF07729 FCD domain NP095_13825 PF00005 ABC transporter NP095_13830 PF00005 ABC transporter NP095_13830 PF12399 Branched-chain amino acid ATP-binding cassette transporter NP095_13840 PF02653 Branched-chain amino acid transport system / permease component NP095_13850 PF01425 Amidase NP095_13870 PF00226 DnaJ domain NP095_13870 PF01556 DnaJ C terminal domain NP095_13870 PF00684 DnaJ central domain NP095_13875 PF01025 GrpE NP095_13880 PF00012 Hsp70 protein NP095_13885 PF07730 Histidine kinase NP095_13890 PF00196 Bacterial regulatory proteins, luxR family NP095_13890 PF00072 Response regulator receiver domain NP095_13895 PF00005 ABC transporter NP095_13895 PF02687 FtsX-like permease family NP095_13895 PF12704 MacB-like periplasmic core domain NP095_13905 PF05199 GMC oxidoreductase NP095_13910 PF00440 Bacterial regulatory proteins, tetR family NP095_13910 PF13977 BetI-type transcriptional repressor, C-terminal NP095_13915 PF00743 Flavin-binding monooxygenase-like NP095_13930 PF12823 Domain of unknown function (DUF3817) NP095_13930 PF03176 MMPL family NP095_13955 PF00860 Permease family NP095_13960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP095_13975 PF01425 Amidase NP095_13980 PF00557 Metallopeptidase family M24 NP095_13995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_13995 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_13995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_14000 PF01575 MaoC like domain NP095_14005 PF04203 Sortase domain NP095_14050 PF02405 Permease MlaE NP095_14055 PF02405 Permease MlaE NP095_14060 PF00005 ABC transporter NP095_14075 PF00005 ABC transporter NP095_14080 PF09819 ABC-type cobalt transport system, permease component NP095_14095 PF07690 Major Facilitator Superfamily NP095_14100 PF02754 Cysteine-rich domain NP095_14100 PF13183 4Fe-4S dicluster domain NP095_14100 PF02665 Nitrate reductase gamma subunit NP095_14110 PF00005 ABC transporter NP095_14115 PF00294 pfkB family carbohydrate kinase NP095_14120 PF04227 Indigoidine synthase A like protein NP095_14135 PF00692 dUTPase NP095_14140 PF00582 Universal stress protein family NP095_14155 PF00561 alpha/beta hydrolase fold NP095_14160 PF00378 Enoyl-CoA hydratase/isomerase NP095_14170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP095_14170 PF03466 LysR substrate binding domain NP095_14175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_14175 PF12806 Acetyl-CoA dehydrogenase C-terminal like NP095_14175 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_14175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_14190 PF00106 short chain dehydrogenase NP095_14200 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NP095_14200 PF00364 Biotin-requiring enzyme NP095_14200 PF02817 e3 binding domain NP095_14205 PF02779 Transketolase, pyrimidine binding domain NP095_14205 PF02780 Transketolase, C-terminal domain NP095_14210 PF00676 Dehydrogenase E1 component NP095_14215 PF00155 Aminotransferase class I and II NP095_14220 PF00892 EamA-like transporter family NP095_14230 PF01451 Low molecular weight phosphotyrosine protein phosphatase NP095_14235 PF03881 Fructosamine kinase NP095_14240 PF00072 Response regulator receiver domain NP095_14240 PF00486 Transcriptional regulatory protein, C terminal NP095_14245 PF00672 HAMP domain NP095_14245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP095_14245 PF00512 His Kinase A (phospho-acceptor) domain NP095_14250 PF13180 PDZ domain NP095_14260 PF01593 Flavin containing amine oxidoreductase NP095_14265 PF02416 mttA/Hcf106 family NP095_14270 PF02416 mttA/Hcf106 family NP095_14275 PF00902 Sec-independent protein translocase protein (TatC) NP095_14280 PF00117 Glutamine amidotransferase class-I NP095_14280 PF00425 chorismate binding enzyme NP095_14320 PF00378 Enoyl-CoA hydratase/isomerase NP095_14320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NP095_14320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NP095_14325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_14325 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_14325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_14330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NP095_14330 PF00364 Biotin-requiring enzyme NP095_14330 PF00289 Biotin carboxylase, N-terminal domain NP095_14330 PF02785 Biotin carboxylase C-terminal domain NP095_14335 PF01039 Carboxyl transferase domain NP095_14345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_14345 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_14345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_14385 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain NP095_14385 PF08608 Wyosine base formation NP095_14390 PF00440 Bacterial regulatory proteins, tetR family NP095_14400 PF07859 alpha/beta hydrolase fold NP095_14405 PF00365 Phosphofructokinase NP095_14410 PF01053 Cys/Met metabolism PLP-dependent enzyme NP095_14415 PF00561 alpha/beta hydrolase fold NP095_14420 PF12695 Alpha/beta hydrolase family NP095_14425 PF00271 Helicase conserved C-terminal domain NP095_14425 PF00270 DEAD/DEAH box helicase NP095_14430 PF02126 Phosphotriesterase family NP095_14435 PF16884 N-terminal domain of oxidoreductase NP095_14435 PF00107 Zinc-binding dehydrogenase NP095_14440 PF00881 Nitroreductase family NP095_14445 PF00106 short chain dehydrogenase NP095_14455 PF14765 Polyketide synthase dehydratase NP095_14455 PF08240 Alcohol dehydrogenase GroES-like domain NP095_14455 PF16197 Ketoacyl-synthetase C-terminal extension NP095_14455 PF00109 Beta-ketoacyl synthase, N-terminal domain NP095_14455 PF02801 Beta-ketoacyl synthase, C-terminal domain NP095_14455 PF00550 Phosphopantetheine attachment site NP095_14455 PF08659 KR domain NP095_14455 PF00698 Acyl transferase domain NP095_14470 PF00378 Enoyl-CoA hydratase/isomerase NP095_14480 PF00881 Nitroreductase family NP095_14490 PF00381 PTS HPr component phosphorylation site NP095_14495 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NP095_14495 PF02378 Phosphotransferase system, EIIC NP095_14500 PF00294 pfkB family carbohydrate kinase NP095_14505 PF02896 PEP-utilising enzyme, TIM barrel domain NP095_14505 PF05524 PEP-utilising enzyme, N-terminal NP095_14505 PF00391 PEP-utilising enzyme, mobile domain NP095_14515 PF13460 NAD(P)H-binding NP095_14515 PF11066 Protein of unknown function (DUF2867) NP095_14520 PF13520 Amino acid permease NP095_14530 PF03472 Autoinducer binding domain NP095_14530 PF00196 Bacterial regulatory proteins, luxR family NP095_14540 PF13614 AAA domain NP095_14545 PF01451 Low molecular weight phosphotyrosine protein phosphatase NP095_14565 PF00378 Enoyl-CoA hydratase/isomerase NP095_14565 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NP095_14565 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NP095_14570 PF00108 Thiolase, N-terminal domain NP095_14570 PF02803 Thiolase, C-terminal domain NP095_14600 PF00534 Glycosyl transferases group 1 NP095_14600 PF13439 Glycosyltransferase Family 4 NP095_14610 PF13439 Glycosyltransferase Family 4 NP095_14610 PF00534 Glycosyl transferases group 1 NP095_14640 PF13439 Glycosyltransferase Family 4 NP095_14645 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NP095_14645 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NP095_14650 PF00962 Adenosine/AMP deaminase NP095_14660 PF07859 alpha/beta hydrolase fold NP095_14665 PF13607 Succinyl-CoA ligase like flavodoxin domain NP095_14665 PF13380 CoA binding domain NP095_14670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_14670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_14670 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_14675 PF00440 Bacterial regulatory proteins, tetR family NP095_14680 PF01575 MaoC like domain NP095_14685 PF00106 short chain dehydrogenase NP095_14700 PF00753 Metallo-beta-lactamase superfamily NP095_14700 PF16123 Hydroxyacylglutathione hydrolase C-terminus NP095_14705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP095_14710 PF12911 N-terminal TM domain of oligopeptide transport permease C NP095_14710 PF00528 Binding-protein-dependent transport system inner membrane component NP095_14715 PF00528 Binding-protein-dependent transport system inner membrane component NP095_14720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP095_14720 PF00005 ABC transporter NP095_14725 PF00005 ABC transporter NP095_14725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP095_14730 PF07690 Major Facilitator Superfamily NP095_14735 PF02770 Acyl-CoA dehydrogenase, middle domain NP095_14735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP095_14735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP095_14740 PF02515 CoA-transferase family III NP095_14745 PF12697 Alpha/beta hydrolase family NP095_14755 PF00005 ABC transporter NP095_14760 PF00528 Binding-protein-dependent transport system inner membrane component NP095_14765 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP095_14785 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP095_14785 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NP095_14795 PF02146 Sir2 family NP095_14800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NP095_14800 PF01842 ACT domain NP095_14800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NP095_14805 PF03061 Thioesterase superfamily NP095_14810 PF02583 Metal-sensitive transcriptional repressor NP095_14820 PF00403 Heavy-metal-associated domain NP095_14840 PF00005 ABC transporter NP095_14840 PF00664 ABC transporter transmembrane region NP095_14855 PF00171 Aldehyde dehydrogenase family NP095_14865 PF09335 SNARE associated Golgi protein NP095_14875 PF00155 Aminotransferase class I and II NP095_14885 PF01425 Amidase NP095_14895 PF00485 Phosphoribulokinase / Uridine kinase family NP095_14905 PF00326 Prolyl oligopeptidase family NP095_14915 PF07730 Histidine kinase NP095_14915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP095_14915 PF13492 GAF domain NP095_14925 PF02146 Sir2 family NP095_14930 PF00459 Inositol monophosphatase family NP095_14935 PF02110 Hydroxyethylthiazole kinase family NP095_14940 PF02581 Thiamine monophosphate synthase NP095_14945 PF08543 Phosphomethylpyrimidine kinase NP095_14945 PF03070 TENA/THI-4/PQQC family NP095_14945 PF02581 Thiamine monophosphate synthase NP095_14955 PF13556 PucR C-terminal helix-turn-helix domain NP095_14955 PF17853 GGDEF-like domain NP095_14960 PF00890 FAD binding domain NP095_15000 PF03796 DnaB-like helicase C terminal domain NP095_15000 PF00772 DnaB-like helicase N terminal domain NP095_15005 PF01554 MatE NP095_15010 PF08021 Siderophore-interacting FAD-binding domain NP095_15010 PF04954 Siderophore-interacting protein NP095_15015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP095_15020 PF03948 Ribosomal protein L9, C-terminal domain NP095_15020 PF01281 Ribosomal protein L9, N-terminal domain NP095_15025 PF01084 Ribosomal protein S18 NP095_15030 PF00436 Single-strand binding protein family NP095_15035 PF01250 Ribosomal protein S6 NP095_15040 PF12704 MacB-like periplasmic core domain NP095_15040 PF02687 FtsX-like permease family NP095_15040 PF00005 ABC transporter NP095_15045 PF02687 FtsX-like permease family NP095_15045 PF00005 ABC transporter NP095_15045 PF12704 MacB-like periplasmic core domain NP095_15050 PF00248 Aldo/keto reductase family NP095_15065 PF04174 A circularly permuted ATPgrasp NP095_15090 PF00912 Transglycosylase NP095_15090 PF00905 Penicillin binding protein transpeptidase domain NP095_15095 PF00430 ATP synthase B/B' CF(0) NP095_15100 PF01658 Myo-inositol-1-phosphate synthase NP095_15105 PF05661 Protein of unknown function (DUF808) NP095_15110 PF00480 ROK family NP095_15120 PF00005 ABC transporter NP095_15125 PF00005 ABC transporter NP095_15125 PF12399 Branched-chain amino acid ATP-binding cassette transporter NP095_15130 PF00501 AMP-binding enzyme NP095_15135 PF02653 Branched-chain amino acid transport system / permease component NP095_15140 PF11862 Domain of unknown function (DUF3382) NP095_15140 PF02653 Branched-chain amino acid transport system / permease component NP095_15150 PF00005 ABC transporter NP095_15150 PF12848 ABC transporter NP095_15155 PF08669 Glycine cleavage T-protein C-terminal barrel domain NP095_15155 PF16350 FAD dependent oxidoreductase central domain NP095_15155 PF01571 Aminomethyltransferase folate-binding domain NP095_15155 PF01266 FAD dependent oxidoreductase NP095_15160 PF01743 Poly A polymerase head domain NP095_15160 PF12627 Probable RNA and SrmB- binding site of polymerase A NP095_15160 PF13735 tRNA nucleotidyltransferase domain 2 putative NP095_15170 PF03023 Lipid II flippase MurJ NP095_15175 PF00069 Protein kinase domain NP095_15175 PF13360 PQQ-like domain NP095_15180 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP095_15185 PF00085 Thioredoxin NP095_15190 PF02195 ParB-like nuclease domain NP095_15190 PF17762 HTH domain found in ParB protein NP095_15195 PF13614 AAA domain NP095_15200 PF02527 rRNA small subunit methyltransferase G NP095_15210 PF02096 60Kd inner membrane protein NP095_15215 PF01809 Putative membrane protein insertion efficiency factor NP095_15220 PF00825 Ribonuclease P NP095_15225 PF00468 Ribosomal protein L34