locus-tag class description J6625_00005 PF00308 Bacterial dnaA protein J6625_00005 PF08299 Bacterial dnaA protein helix-turn-helix J6625_00005 PF11638 DnaA N-terminal domain J6625_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain J6625_00010 PF02767 DNA polymerase III beta subunit, central domain J6625_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain J6625_00015 PF02463 RecF/RecN/SMC N terminal domain J6625_00020 PF00204 DNA gyrase B J6625_00020 PF00986 DNA gyrase B subunit, carboxyl terminus J6625_00020 PF18053 DNA gyrase B subunit insert domain J6625_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_00020 PF01751 Toprim domain J6625_00025 PF12833 Helix-turn-helix domain J6625_00025 PF02311 AraC-like ligand binding domain J6625_00030 PF12706 Beta-lactamase superfamily domain J6625_00035 PF00011 Hsp20/alpha crystallin family J6625_00040 PF00011 Hsp20/alpha crystallin family J6625_00045 PF00155 Aminotransferase class I and II J6625_00060 PF07690 Major Facilitator Superfamily J6625_00065 PF00072 Response regulator receiver domain J6625_00065 PF00486 Transcriptional regulatory protein, C terminal J6625_00070 PF02702 Osmosensitive K+ channel His kinase sensor domain J6625_00070 PF13493 Domain of unknown function (DUF4118) J6625_00070 PF13492 GAF domain J6625_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_00070 PF00512 His Kinase A (phospho-acceptor) domain J6625_00075 PF02669 K+-transporting ATPase, c chain J6625_00085 PF03814 Potassium-transporting ATPase A subunit J6625_00090 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_00090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J6625_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_00095 PF00512 His Kinase A (phospho-acceptor) domain J6625_00095 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6625_00100 PF00873 AcrB/AcrD/AcrF family J6625_00105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6625_00110 PF00440 Bacterial regulatory proteins, tetR family J6625_00145 PF12146 Serine aminopeptidase, S33 J6625_00150 PF12105 SpoU, rRNA methylase, C-terminal J6625_00150 PF00588 SpoU rRNA Methylase family J6625_00155 PF02824 TGS domain J6625_00155 PF04607 Region found in RelA / SpoT proteins J6625_00155 PF13291 ACT domain J6625_00160 PF01192 RNA polymerase Rpb6 J6625_00165 PF00625 Guanylate kinase J6625_00170 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J6625_00185 PF00892 EamA-like transporter family J6625_00205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_00205 PF03466 LysR substrate binding domain J6625_00210 PF00579 tRNA synthetases class I (W and Y) J6625_00215 PF00582 Universal stress protein family J6625_00220 PF07055 Enoyl reductase FAD binding domain J6625_00220 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J6625_00220 PF12241 Trans-2-enoyl-CoA reductase catalytic region J6625_00225 PF00990 Diguanylate cyclase, GGDEF domain J6625_00225 PF05230 MASE2 domain J6625_00230 PF00210 Ferritin-like domain J6625_00240 PF07690 Major Facilitator Superfamily J6625_00245 PF01810 LysE type translocator J6625_00260 PF15976 CS1-pili formation C-terminal J6625_00260 PF16967 E-set like domain J6625_00265 PF18649 EcpB C-terminal domain J6625_00270 PF16449 Fimbrillin MatB J6625_00275 PF00196 Bacterial regulatory proteins, luxR family J6625_00275 PF00072 Response regulator receiver domain J6625_00280 PF00989 PAS fold J6625_00280 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6625_00280 PF00072 Response regulator receiver domain J6625_00280 PF01627 Hpt domain J6625_00280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_00280 PF00512 His Kinase A (phospho-acceptor) domain J6625_00290 PF07694 5TMR of 5TMR-LYT J6625_00290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_00290 PF06580 Histidine kinase J6625_00295 PF00072 Response regulator receiver domain J6625_00295 PF04397 LytTr DNA-binding domain J6625_00300 PF07690 Major Facilitator Superfamily J6625_00305 PF02222 ATP-grasp domain J6625_00305 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J6625_00310 PF00731 AIR carboxylase J6625_00325 PF03466 LysR substrate binding domain J6625_00325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_00330 PF00593 TonB dependent receptor J6625_00330 PF07715 TonB-dependent Receptor Plug Domain J6625_00335 PF01177 Asp/Glu/Hydantoin racemase J6625_00375 PF00899 ThiF family J6625_00380 PF02657 Fe-S metabolism associated domain J6625_00385 PF00266 Aminotransferase class-V J6625_00390 PF00580 UvrD/REP helicase N-terminal domain J6625_00390 PF13361 UvrD-like helicase C-terminal domain J6625_00395 PF03707 Bacterial signalling protein N terminal repeat J6625_00395 PF00563 EAL domain J6625_00395 PF00990 Diguanylate cyclase, GGDEF domain J6625_00400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J6625_00405 PF00107 Zinc-binding dehydrogenase J6625_00405 PF08240 Alcohol dehydrogenase GroES-like domain J6625_00410 PF00155 Aminotransferase class I and II J6625_00415 PF00440 Bacterial regulatory proteins, tetR family J6625_00415 PF08360 QacR-like protein, C-terminal region J6625_00420 PF01370 NAD dependent epimerase/dehydratase family J6625_00425 PF13439 Glycosyltransferase Family 4 J6625_00440 PF00132 Bacterial transferase hexapeptide (six repeats) J6625_00465 PF03748 Flagellar basal body-associated protein FliL J6625_00470 PF04345 Chorismate lyase J6625_00475 PF01040 UbiA prenyltransferase family J6625_00480 PF01553 Acyltransferase J6625_00485 PF00717 Peptidase S24-like J6625_00485 PF01726 LexA DNA binding domain J6625_00495 PF02630 SCO1/SenC J6625_00500 PF01554 MatE J6625_00505 PF00588 SpoU rRNA Methylase family J6625_00510 PF00672 HAMP domain J6625_00510 PF00512 His Kinase A (phospho-acceptor) domain J6625_00510 PF16527 Two-component sensor protein CpxA, periplasmic domain J6625_00510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_00515 PF00072 Response regulator receiver domain J6625_00515 PF00486 Transcriptional regulatory protein, C terminal J6625_00520 PF16916 Dimerisation domain of Zinc Transporter J6625_00520 PF01545 Cation efflux family J6625_00525 PF00132 Bacterial transferase hexapeptide (six repeats) J6625_00525 PF06426 Serine acetyltransferase, N-terminal J6625_00535 PF06005 Cell division protein ZapB J6625_00545 PF01612 3'-5' exonuclease J6625_00545 PF00476 DNA polymerase family A J6625_00545 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J6625_00545 PF01367 5'-3' exonuclease, C-terminal SAM fold J6625_00550 PF00132 Bacterial transferase hexapeptide (six repeats) J6625_00585 PF00356 Bacterial regulatory proteins, lacI family J6625_00590 PF00703 Glycosyl hydrolases family 2 J6625_00590 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J6625_00590 PF16353 Domain of unknown function(DUF4981) J6625_00590 PF02929 Beta galactosidase small chain J6625_00590 PF02837 Glycosyl hydrolases family 2, sugar binding domain J6625_00595 PF04074 YhcH/YjgK/YiaL J6625_00600 PF13520 Amino acid permease J6625_00605 PF01588 Putative tRNA binding domain J6625_00610 PF13520 Amino acid permease J6625_00615 PF13593 SBF-like CPA transporter family (DUF4137) J6625_00620 PF12867 DinB superfamily J6625_00620 PF03781 Sulfatase-modifying factor enzyme 1 J6625_00635 PF00756 Putative esterase J6625_00640 PF08240 Alcohol dehydrogenase GroES-like domain J6625_00640 PF00107 Zinc-binding dehydrogenase J6625_00645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_00645 PF03466 LysR substrate binding domain J6625_00660 PF02653 Branched-chain amino acid transport system / permease component J6625_00665 PF02653 Branched-chain amino acid transport system / permease component J6625_00670 PF00005 ABC transporter J6625_00675 PF02608 ABC transporter substrate-binding protein PnrA-like J6625_00680 PF13361 UvrD-like helicase C-terminal domain J6625_00680 PF00580 UvrD/REP helicase N-terminal domain J6625_00685 PF13592 Winged helix-turn helix J6625_00685 PF13358 DDE superfamily endonuclease J6625_00690 PF01609 Transposase DDE domain J6625_00690 PF05598 Transposase domain (DUF772) J6625_00700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_00700 PF03466 LysR substrate binding domain J6625_00715 PF14001 YdfZ protein J6625_00735 PF06206 CpeT/CpcT family (DUF1001) J6625_00740 PF01810 LysE type translocator J6625_00745 PF12833 Helix-turn-helix domain J6625_00750 PF00892 EamA-like transporter family J6625_00760 PF00171 Aldehyde dehydrogenase family J6625_00765 PF01381 Helix-turn-helix J6625_00765 PF07883 Cupin domain J6625_00770 PF00202 Aminotransferase class-III J6625_00775 PF00171 Aldehyde dehydrogenase family J6625_00780 PF00958 GMP synthase C terminal domain J6625_00780 PF02540 NAD synthase J6625_00780 PF00117 Glutamine amidotransferase class-I J6625_00785 PF03466 LysR substrate binding domain J6625_00785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_00790 PF00294 pfkB family carbohydrate kinase J6625_00795 PF02082 Transcriptional regulator J6625_00810 PF02646 RmuC family J6625_00815 PF02386 Cation transport protein J6625_00820 PF02254 TrkA-N domain J6625_00820 PF02080 TrkA-C domain J6625_00825 PF01029 NusB family J6625_00825 PF01189 16S rRNA methyltransferase RsmB/F J6625_00830 PF00551 Formyl transferase J6625_00830 PF02911 Formyl transferase, C-terminal domain J6625_00835 PF01327 Polypeptide deformylase J6625_00845 PF17782 DprA winged helix domain J6625_00845 PF02481 DNA recombination-mediator protein A J6625_00850 PF04361 Protein of unknown function (DUF494) J6625_00855 PF01396 Topoisomerase DNA binding C4 zinc finger J6625_00860 PF01300 Telomere recombination J6625_00865 PF01218 Coproporphyrinogen III oxidase J6625_00870 PF08501 Shikimate dehydrogenase substrate binding domain J6625_00870 PF01488 Shikimate / quinate 5-dehydrogenase J6625_00870 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J6625_00875 PF01926 50S ribosome-binding GTPase J6625_00880 PF00034 Cytochrome c J6625_00885 PF04220 Der GTPase activator (YihI) J6625_00890 PF10675 Protein of unknown function (DUF2489) J6625_00895 PF06969 HemN C-terminal domain J6625_00895 PF04055 Radical SAM superfamily J6625_00900 PF00962 Adenosine/AMP deaminase J6625_00905 PF02954 Bacterial regulatory protein, Fis family J6625_00905 PF00072 Response regulator receiver domain J6625_00905 PF00158 Sigma-54 interaction domain J6625_00910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_00910 PF00512 His Kinase A (phospho-acceptor) domain J6625_00910 PF00989 PAS fold J6625_00920 PF00120 Glutamine synthetase, catalytic domain J6625_00920 PF03951 Glutamine synthetase, beta-Grasp domain J6625_00925 PF03144 Elongation factor Tu domain 2 J6625_00925 PF00009 Elongation factor Tu GTP binding domain J6625_00925 PF00679 Elongation factor G C-terminus J6625_00930 PF03631 Virulence factor BrkB J6625_00935 PF02580 D-Tyr-tRNA(Tyr) deacylase J6625_00945 PF00583 Acetyltransferase (GNAT) family J6625_00945 PF09500 Putative thioesterase (yiiD_Cterm) J6625_00955 PF00271 Helicase conserved C-terminal domain J6625_00955 PF00270 DEAD/DEAH box helicase J6625_00955 PF17191 RecG wedge domain J6625_00960 PF13091 PLD-like domain J6625_00965 PF02447 GntP family permease J6625_00970 PF01202 Shikimate kinase J6625_00975 PF00920 Dehydratase family J6625_00980 PF01081 KDPG and KHG aldolase J6625_00995 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J6625_00995 PF00356 Bacterial regulatory proteins, lacI family J6625_01005 PF01551 Peptidase family M23 J6625_01010 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J6625_01010 PF01676 Metalloenzyme superfamily J6625_01015 PF00581 Rhodanese-like domain J6625_01020 PF02556 Preprotein translocase subunit SecB J6625_01025 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J6625_01025 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J6625_01030 PF01521 Iron-sulphur cluster biosynthesis J6625_01030 PF01106 NifU-like domain J6625_01035 PF00156 Phosphoribosyl transferase domain J6625_01040 PF00561 alpha/beta hydrolase fold J6625_01055 PF16921 Tex protein YqgF-like domain J6625_01055 PF17674 HHH domain J6625_01055 PF00575 S1 RNA binding domain J6625_01055 PF09371 Tex-like protein N-terminal domain J6625_01060 PF01272 Transcription elongation factor, GreA/GreB, C-term J6625_01060 PF03449 Transcription elongation factor, N-terminal J6625_01065 PF00072 Response regulator receiver domain J6625_01065 PF00486 Transcriptional regulatory protein, C terminal J6625_01070 PF00512 His Kinase A (phospho-acceptor) domain J6625_01070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_01070 PF00672 HAMP domain J6625_01080 PF00338 Ribosomal protein S10p/S20e J6625_01085 PF00297 Ribosomal protein L3 J6625_01090 PF00573 Ribosomal protein L4/L1 family J6625_01095 PF00276 Ribosomal protein L23 J6625_01100 PF00181 Ribosomal Proteins L2, RNA binding domain J6625_01100 PF03947 Ribosomal Proteins L2, C-terminal domain J6625_01105 PF00203 Ribosomal protein S19 J6625_01110 PF00237 Ribosomal protein L22p/L17e J6625_01115 PF07650 KH domain J6625_01115 PF00189 Ribosomal protein S3, C-terminal domain J6625_01120 PF00252 Ribosomal protein L16p/L10e J6625_01125 PF00831 Ribosomal L29 protein J6625_01130 PF00366 Ribosomal protein S17 J6625_01135 PF00238 Ribosomal protein L14p/L23e J6625_01140 PF00467 KOW motif J6625_01140 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J6625_01145 PF00673 ribosomal L5P family C-terminus J6625_01145 PF00281 Ribosomal protein L5 J6625_01150 PF00253 Ribosomal protein S14p/S29e J6625_01155 PF00410 Ribosomal protein S8 J6625_01160 PF00347 Ribosomal protein L6 J6625_01165 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J6625_01170 PF03719 Ribosomal protein S5, C-terminal domain J6625_01170 PF00333 Ribosomal protein S5, N-terminal domain J6625_01175 PF00327 Ribosomal protein L30p/L7e J6625_01180 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J6625_01185 PF00344 SecY translocase J6625_01190 PF00444 Ribosomal protein L36 J6625_01195 PF00416 Ribosomal protein S13/S18 J6625_01200 PF00411 Ribosomal protein S11 J6625_01205 PF00163 Ribosomal protein S4/S9 N-terminal domain J6625_01205 PF01479 S4 domain J6625_01210 PF01000 RNA polymerase Rpb3/RpoA insert domain J6625_01210 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J6625_01210 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J6625_01215 PF01196 Ribosomal protein L17 J6625_01265 PF00999 Sodium/hydrogen exchanger family J6625_01265 PF02254 TrkA-N domain J6625_01270 PF02525 Flavodoxin-like fold J6625_01275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_01275 PF03466 LysR substrate binding domain J6625_01280 PF00106 short chain dehydrogenase J6625_01295 PF00326 Prolyl oligopeptidase family J6625_01295 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J6625_01300 PF16868 NMT1-like family J6625_01315 PF07947 YhhN family J6625_01320 PF07690 Major Facilitator Superfamily J6625_01325 PF13533 Biotin-lipoyl like J6625_01330 PF03466 LysR substrate binding domain J6625_01330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_01340 PF00375 Sodium:dicarboxylate symporter family J6625_01345 PF10678 Protein of unknown function (DUF2492) J6625_01350 PF01914 MarC family integral membrane protein J6625_01355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_01355 PF03466 LysR substrate binding domain J6625_01360 PF02416 mttA/Hcf106 family J6625_01370 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6625_01370 PF01464 Transglycosylase SLT domain J6625_01380 PF13091 PLD-like domain J6625_01390 PF00440 Bacterial regulatory proteins, tetR family J6625_01395 PF07226 Protein of unknown function (DUF1422) J6625_01410 PF00448 SRP54-type protein, GTPase domain J6625_01410 PF02881 SRP54-type protein, helical bundle domain J6625_01415 PF00005 ABC transporter J6625_01420 PF18075 FtsX extracellular domain J6625_01425 PF04542 Sigma-70 region 2 J6625_01425 PF04545 Sigma-70, region 4 J6625_01425 PF00140 Sigma-70 factor, region 1.2 J6625_01430 PF00484 Carbonic anhydrase J6625_01435 PF00392 Bacterial regulatory proteins, gntR family J6625_01435 PF07702 UTRA domain J6625_01440 PF01610 Transposase J6625_01440 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_01440 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_01445 PF01979 Amidohydrolase family J6625_01450 PF00491 Arginase family J6625_01455 PF01175 Urocanase Rossmann-like domain J6625_01455 PF17392 Urocanase C-terminal domain J6625_01455 PF17391 Urocanase N-terminal domain J6625_01460 PF00221 Aromatic amino acid lyase J6625_01465 PF01699 Sodium/calcium exchanger protein J6625_01470 PF12792 CSS motif domain associated with EAL J6625_01470 PF00563 EAL domain J6625_01505 PF03958 Bacterial type II/III secretion system short domain J6625_01505 PF00263 Bacterial type II and III secretion system protein J6625_01525 PF00437 Type II/IV secretion system protein J6625_01525 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J6625_01530 PF00482 Type II secretion system (T2SS), protein F J6625_01545 PF07963 Prokaryotic N-terminal methylation motif J6625_01545 PF00114 Pilin (bacterial filament) J6625_01550 PF07963 Prokaryotic N-terminal methylation motif J6625_01550 PF00114 Pilin (bacterial filament) J6625_01580 PF04085 rod shape-determining protein MreC J6625_01585 PF04093 rod shape-determining protein MreD J6625_01590 PF02545 Maf-like protein J6625_01595 PF10150 Ribonuclease E/G family J6625_01595 PF00575 S1 RNA binding domain J6625_01600 PF13502 AsmA-like C-terminal region J6625_01600 PF13116 Protein of unknown function J6625_01605 PF00795 Carbon-nitrogen hydrolase J6625_01610 PF01523 Putative modulator of DNA gyrase J6625_01615 PF01418 Helix-turn-helix domain, rpiR family J6625_01615 PF01380 SIS domain J6625_01630 PF00367 phosphotransferase system, EIIB J6625_01630 PF02378 Phosphotransferase system, EIIC J6625_01635 PF13580 SIS domain J6625_01645 PF01914 MarC family integral membrane protein J6625_01650 PF07690 Major Facilitator Superfamily J6625_01660 PF04228 Putative neutral zinc metallopeptidase J6625_01680 PF00999 Sodium/hydrogen exchanger family J6625_01685 PF00809 Pterin binding enzyme J6625_01685 PF02574 Homocysteine S-methyltransferase J6625_01685 PF02607 B12 binding domain J6625_01685 PF02310 B12 binding domain J6625_01685 PF02965 Vitamin B12 dependent methionine synthase, activation domain J6625_01695 PF08443 RimK-like ATP-grasp domain J6625_01695 PF18030 RimK PreATP-grasp domain J6625_01700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_01705 PF00072 Response regulator receiver domain J6625_01705 PF00486 Transcriptional regulatory protein, C terminal J6625_01720 PF13667 ThiC-associated domain J6625_01720 PF01964 Radical SAM ThiC family J6625_01725 PF02581 Thiamine monophosphate synthase J6625_01730 PF00899 ThiF family J6625_01740 PF05690 Thiazole biosynthesis protein ThiG J6625_01745 PF06968 Biotin and Thiamin Synthesis associated domain J6625_01745 PF04055 Radical SAM superfamily J6625_01760 PF00132 Bacterial transferase hexapeptide (six repeats) J6625_01765 PF13036 Peptidoglycan-synthase activator LpoB J6625_01770 PF00990 Diguanylate cyclase, GGDEF domain J6625_01775 PF06055 Exopolysaccharide synthesis, ExoD J6625_01790 PF08803 Putative mono-oxygenase ydhR J6625_01795 PF01638 HxlR-like helix-turn-helix J6625_01810 PF07715 TonB-dependent Receptor Plug Domain J6625_01810 PF00593 TonB dependent receptor J6625_01825 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded J6625_01830 PF03692 Putative zinc- or iron-chelating domain J6625_01835 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J6625_01840 PF01722 BolA-like protein J6625_01850 PF05494 MlaC protein J6625_01855 PF02470 MlaD protein J6625_01860 PF02405 Permease MlaE J6625_01865 PF00005 ABC transporter J6625_01870 PF00571 CBS domain J6625_01870 PF01380 SIS domain J6625_01885 PF03968 OstA-like protein J6625_01890 PF12399 Branched-chain amino acid ATP-binding cassette transporter J6625_01890 PF00005 ABC transporter J6625_01895 PF00309 Sigma-54 factor, Activator interacting domain (AID) J6625_01895 PF04963 Sigma-54 factor, core binding domain J6625_01895 PF04552 Sigma-54, DNA binding domain J6625_01900 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J6625_01905 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J6625_01910 PF03668 P-loop ATPase protein family J6625_01915 PF00381 PTS HPr component phosphorylation site J6625_01920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J6625_01920 PF02378 Phosphotransferase system, EIIC J6625_01920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J6625_01925 PF07071 KDGP aldolase J6625_01930 PF03841 L-seryl-tRNA selenium transferase J6625_01935 PF01979 Amidohydrolase family J6625_01965 PF13180 PDZ domain J6625_01970 PF00595 PDZ domain J6625_01970 PF13180 PDZ domain J6625_01980 PF03969 AFG1-like ATPase J6625_01985 PF00572 Ribosomal protein L13 J6625_01990 PF00380 Ribosomal protein S9/S16 J6625_01995 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J6625_01995 PF00355 Rieske [2Fe-2S] domain J6625_02000 PF00033 Cytochrome b/b6/petB J6625_02000 PF00032 Cytochrome b(C-terminal)/b6/petD J6625_02005 PF02167 Cytochrome C1 family J6625_02010 PF02798 Glutathione S-transferase, N-terminal domain J6625_02010 PF00043 Glutathione S-transferase, C-terminal domain J6625_02015 PF04386 Stringent starvation protein B J6625_02020 PF04972 BON domain J6625_02025 PF13580 SIS domain J6625_02030 PF02021 Uncharacterised protein family UPF0102 J6625_02035 PF04348 LppC putative lipoprotein J6625_02040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J6625_02050 PF02381 MraZ protein, putative antitoxin-like J6625_02055 PF01795 MraW methylase family J6625_02060 PF04999 Cell division protein FtsL J6625_02065 PF00905 Penicillin binding protein transpeptidase domain J6625_02065 PF03717 Penicillin-binding Protein dimerisation domain J6625_02070 PF08245 Mur ligase middle domain J6625_02070 PF02875 Mur ligase family, glutamate ligase domain J6625_02070 PF01225 Mur ligase family, catalytic domain J6625_02075 PF01225 Mur ligase family, catalytic domain J6625_02075 PF02875 Mur ligase family, glutamate ligase domain J6625_02075 PF08245 Mur ligase middle domain J6625_02080 PF00953 Glycosyl transferase family 4 J6625_02080 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 J6625_02085 PF02875 Mur ligase family, glutamate ligase domain J6625_02085 PF08245 Mur ligase middle domain J6625_02090 PF01098 Cell cycle protein J6625_02095 PF04101 Glycosyltransferase family 28 C-terminal domain J6625_02095 PF03033 Glycosyltransferase family 28 N-terminal domain J6625_02100 PF01225 Mur ligase family, catalytic domain J6625_02100 PF08245 Mur ligase middle domain J6625_02100 PF02875 Mur ligase family, glutamate ligase domain J6625_02105 PF03799 Cell division protein FtsQ J6625_02105 PF08478 POTRA domain, FtsQ-type J6625_02110 PF02491 SHS2 domain inserted in FTSA J6625_02115 PF12327 FtsZ family, C-terminal domain J6625_02115 PF00091 Tubulin/FtsZ family, GTPase domain J6625_02120 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J6625_02130 PF02810 SEC-C motif J6625_02130 PF07517 SecA DEAD-like domain J6625_02130 PF01043 SecA preprotein cross-linking domain J6625_02130 PF07516 SecA Wing and Scaffold domain J6625_02140 PF00293 NUDIX domain J6625_02145 PF03884 DNA gyrase inhibitor YacG J6625_02150 PF07072 Cell division protein J6625_02155 PF01121 Dephospho-CoA kinase J6625_02160 PF06750 Bacterial Peptidase A24 N-terminal domain J6625_02160 PF01478 Type IV leader peptidase family J6625_02165 PF00482 Type II secretion system (T2SS), protein F J6625_02170 PF00437 Type II/IV secretion system protein J6625_02170 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J6625_02175 PF07963 Prokaryotic N-terminal methylation motif J6625_02180 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J6625_02180 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J6625_02190 PF01510 N-acetylmuramoyl-L-alanine amidase J6625_02195 PF07729 FCD domain J6625_02195 PF00392 Bacterial regulatory proteins, gntR family J6625_02200 PF00456 Transketolase, thiamine diphosphate binding domain J6625_02200 PF17831 Pyruvate dehydrogenase E1 component middle domain J6625_02205 PF00364 Biotin-requiring enzyme J6625_02205 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J6625_02205 PF02817 e3 binding domain J6625_02210 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_02210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J6625_02220 PF12729 Four helix bundle sensory module for signal transduction J6625_02220 PF00672 HAMP domain J6625_02220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_02225 PF12729 Four helix bundle sensory module for signal transduction J6625_02225 PF00672 HAMP domain J6625_02225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_02230 PF01734 Patatin-like phospholipase J6625_02235 PF11791 Aconitate B N-terminal domain J6625_02235 PF06434 Aconitate hydratase 2 N-terminus J6625_02235 PF00330 Aconitase family (aconitate hydratase) J6625_02240 PF12792 CSS motif domain associated with EAL J6625_02240 PF00563 EAL domain J6625_02245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_02245 PF03466 LysR substrate binding domain J6625_02250 PF01810 LysE type translocator J6625_02255 PF04030 D-arabinono-1,4-lactone oxidase J6625_02255 PF01565 FAD binding domain J6625_02260 PF02492 CobW/HypB/UreG, nucleotide-binding domain J6625_02260 PF07683 Cobalamin synthesis protein cobW C-terminal domain J6625_02265 PF07690 Major Facilitator Superfamily J6625_02275 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J6625_02280 PF02152 Dihydroneopterin aldolase J6625_02285 PF02660 Glycerol-3-phosphate acyltransferase J6625_02325 PF02028 BCCT, betaine/carnitine/choline family transporter J6625_02330 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_02330 PF01610 Transposase J6625_02330 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_02335 PF01624 MutS domain I J6625_02335 PF05188 MutS domain II J6625_02335 PF05192 MutS domain III J6625_02335 PF05190 MutS family domain IV J6625_02335 PF00488 MutS domain V J6625_02345 PF02464 Competence-damaged protein J6625_02350 PF00154 recA bacterial DNA recombination protein J6625_02355 PF02631 RecX family J6625_02360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J6625_02360 PF01411 tRNA synthetases class II (A) J6625_02360 PF02272 DHHA1 domain J6625_02365 PF00696 Amino acid kinase family J6625_02365 PF01842 ACT domain J6625_02365 PF13840 ACT domain J6625_02370 PF02599 Global regulator protein family J6625_02405 PF00768 D-alanyl-D-alanine carboxypeptidase J6625_02410 PF01609 Transposase DDE domain J6625_02410 PF13006 Insertion element 4 transposase N-terminal J6625_02415 PF09335 SNARE associated Golgi protein J6625_02420 PF00571 CBS domain J6625_02420 PF01595 Cyclin M transmembrane N-terminal domain J6625_02420 PF03471 Transporter associated domain J6625_02425 PF00133 tRNA synthetases class I (I, L, M and V) J6625_02425 PF08264 Anticodon-binding domain of tRNA J6625_02425 PF10458 Valyl tRNA synthetase tRNA binding arm J6625_02435 PF00883 Cytosol aminopeptidase family, catalytic domain J6625_02435 PF02789 Cytosol aminopeptidase family, N-terminal domain J6625_02440 PF03739 Lipopolysaccharide export system permease LptF/LptG J6625_02445 PF03739 Lipopolysaccharide export system permease LptF/LptG J6625_02465 PF00909 Ammonium Transporter Family J6625_02470 PF01938 TRAM domain J6625_02470 PF05958 tRNA (Uracil-5-)-methyltransferase J6625_02485 PF07963 Prokaryotic N-terminal methylation motif J6625_02490 PF01026 TatD related DNase J6625_02495 PF01773 Na+ dependent nucleoside transporter N-terminus J6625_02495 PF07662 Na+ dependent nucleoside transporter C-terminus J6625_02495 PF07670 Nucleoside recognition J6625_02505 PF01791 DeoC/LacD family aldolase J6625_02510 PF00591 Glycosyl transferase family, a/b domain J6625_02510 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain J6625_02510 PF02885 Glycosyl transferase family, helical bundle domain J6625_02515 PF01676 Metalloenzyme superfamily J6625_02520 PF01048 Phosphorylase superfamily J6625_02525 PF00563 EAL domain J6625_02525 PF00990 Diguanylate cyclase, GGDEF domain J6625_02525 PF05231 MASE1 J6625_02525 PF08447 PAS fold J6625_02525 PF08448 PAS fold J6625_02525 PF13426 PAS domain J6625_02535 PF18429 Domain of unknown function (DUF5609) J6625_02550 PF18073 Rubredoxin metal binding domain J6625_02555 PF07238 PilZ domain J6625_02560 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ J6625_02565 PF00216 Bacterial DNA-binding protein J6625_02580 PF01207 Dihydrouridine synthase (Dus) J6625_02585 PF01475 Ferric uptake regulator family J6625_02600 PF05525 Branched-chain amino acid transport protein J6625_02605 PF05175 Methyltransferase small domain J6625_02610 PF00271 Helicase conserved C-terminal domain J6625_02610 PF00270 DEAD/DEAH box helicase J6625_02615 PF03883 Peroxide stress protein YaaA J6625_02620 PF00437 Type II/IV secretion system protein J6625_02625 PF00437 Type II/IV secretion system protein J6625_02630 PF01168 Alanine racemase, N-terminal domain J6625_02635 PF03807 NADP oxidoreductase coenzyme F420-dependent J6625_02635 PF14748 Pyrroline-5-carboxylate reductase dimerisation J6625_02640 PF02325 YGGT family J6625_02645 PF02594 Uncharacterised ACR, YggU family COG1872 J6625_02665 PF06062 Uncharacterised protein family (UPF0231) J6625_02670 PF13556 PucR C-terminal helix-turn-helix domain J6625_02670 PF17853 GGDEF-like domain J6625_02670 PF05651 Putative sugar diacid recognition J6625_02675 PF02447 GntP family permease J6625_02680 PF02595 Glycerate kinase family J6625_02690 PF00255 Glutathione peroxidase J6625_02695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_02695 PF03466 LysR substrate binding domain J6625_02700 PF01773 Na+ dependent nucleoside transporter N-terminus J6625_02700 PF07662 Na+ dependent nucleoside transporter C-terminus J6625_02700 PF07670 Nucleoside recognition J6625_02705 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J6625_02705 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J6625_02710 PF00472 RF-1 domain J6625_02715 PF00543 Nitrogen regulatory protein P-II J6625_02730 PF00005 ABC transporter J6625_02730 PF08402 TOBE domain J6625_02735 PF04261 Dyp-type peroxidase family J6625_02740 PF02863 Arginine repressor, C-terminal domain J6625_02740 PF01316 Arginine repressor, DNA binding domain J6625_02745 PF00005 ABC transporter J6625_02750 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6625_02755 PF00528 Binding-protein-dependent transport system inner membrane component J6625_02760 PF00528 Binding-protein-dependent transport system inner membrane component J6625_02765 PF00056 lactate/malate dehydrogenase, NAD binding domain J6625_02765 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J6625_02770 PF08238 Sel1 repeat J6625_02775 PF00970 Oxidoreductase FAD-binding domain J6625_02775 PF00175 Oxidoreductase NAD-binding domain J6625_02775 PF00042 Globin J6625_02780 PF02082 Transcriptional regulator J6625_02785 PF00571 CBS domain J6625_02785 PF03471 Transporter associated domain J6625_02785 PF01595 Cyclin M transmembrane N-terminal domain J6625_02790 PF01578 Cytochrome C assembly protein J6625_02795 PF00448 SRP54-type protein, GTPase domain J6625_02795 PF02881 SRP54-type protein, helical bundle domain J6625_02795 PF02978 Signal peptide binding domain J6625_02800 PF00886 Ribosomal protein S16 J6625_02805 PF05239 PRC-barrel domain J6625_02805 PF01782 RimM N-terminal domain J6625_02810 PF01746 tRNA (Guanine-1)-methyltransferase J6625_02815 PF01245 Ribosomal protein L19 J6625_02825 PF02976 DNA mismatch repair enzyme MutH J6625_02830 PF00293 NUDIX domain J6625_02835 PF02896 PEP-utilising enzyme, TIM barrel domain J6625_02835 PF00391 PEP-utilising enzyme, mobile domain J6625_02835 PF05524 PEP-utilising enzyme, N-terminal J6625_02835 PF01590 GAF domain J6625_02840 PF01790 Prolipoprotein diacylglyceryl transferase J6625_02845 PF00303 Thymidylate synthase J6625_02850 PF06965 Na+/H+ antiporter 1 J6625_02860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_02860 PF03466 LysR substrate binding domain J6625_02865 PF01022 Bacterial regulatory protein, arsR family J6625_02870 PF01649 Ribosomal protein S20 J6625_02875 PF03023 Lipid II flippase MurJ J6625_02880 PF06574 FAD synthetase J6625_02880 PF01687 Riboflavin kinase J6625_02885 PF06827 Zinc finger found in FPG and IleRS J6625_02885 PF08264 Anticodon-binding domain of tRNA J6625_02885 PF00133 tRNA synthetases class I (I, L, M and V) J6625_02890 PF01252 Signal peptidase (SPase) II J6625_02895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6625_02900 PF02401 LytB protein J6625_02905 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor J6625_02905 PF07963 Prokaryotic N-terminal methylation motif J6625_02940 PF00795 Carbon-nitrogen hydrolase J6625_02940 PF02540 NAD synthase J6625_02945 PF00543 Nitrogen regulatory protein P-II J6625_02955 PF02664 S-Ribosylhomocysteinase (LuxS) J6625_02960 PF00990 Diguanylate cyclase, GGDEF domain J6625_02965 PF17876 Cold shock domain J6625_02965 PF00575 S1 RNA binding domain J6625_02965 PF08206 Ribonuclease B OB domain J6625_02965 PF00773 RNB domain J6625_02965 PF08461 Ribonuclease R winged-helix domain J6625_02970 PF08032 RNA 2'-O ribose methyltransferase substrate binding J6625_02970 PF00588 SpoU rRNA Methylase family J6625_02980 PF13673 Acetyltransferase (GNAT) domain J6625_02985 PF02272 DHHA1 domain J6625_02985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J6625_02985 PF01411 tRNA synthetases class II (A) J6625_02990 PF01566 Natural resistance-associated macrophage protein J6625_02995 PF01250 Ribosomal protein S6 J6625_03000 PF01084 Ribosomal protein S18 J6625_03005 PF03948 Ribosomal protein L9, C-terminal domain J6625_03005 PF01281 Ribosomal protein L9, N-terminal domain J6625_03010 PF00970 Oxidoreductase FAD-binding domain J6625_03010 PF00175 Oxidoreductase NAD-binding domain J6625_03030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J6625_03040 PF00698 Acyl transferase domain J6625_03040 PF08240 Alcohol dehydrogenase GroES-like domain J6625_03040 PF08990 Erythronolide synthase docking J6625_03040 PF16197 Ketoacyl-synthetase C-terminal extension J6625_03040 PF00109 Beta-ketoacyl synthase, N-terminal domain J6625_03040 PF02801 Beta-ketoacyl synthase, C-terminal domain J6625_03040 PF00550 Phosphopantetheine attachment site J6625_03040 PF08659 KR domain J6625_03040 PF14765 Polyketide synthase dehydratase J6625_03045 PF09335 SNARE associated Golgi protein J6625_03050 PF00675 Insulinase (Peptidase family M16) J6625_03050 PF05193 Peptidase M16 inactive domain J6625_03055 PF04262 Glutamate-cysteine ligase J6625_03060 PF03605 Anaerobic c4-dicarboxylate membrane transporter J6625_03065 PF10415 Fumarase C C-terminus J6625_03065 PF00206 Lyase J6625_03070 PF04186 FxsA cytoplasmic membrane protein J6625_03075 PF01554 MatE J6625_03080 PF00166 Chaperonin 10 Kd subunit J6625_03085 PF00118 TCP-1/cpn60 chaperonin family J6625_03095 PF03707 Bacterial signalling protein N terminal repeat J6625_03095 PF00563 EAL domain J6625_03095 PF00990 Diguanylate cyclase, GGDEF domain J6625_03105 PF00849 RNA pseudouridylate synthase J6625_03110 PF18339 RapA N-terminal Tudor like domain 1 J6625_03110 PF18337 RapA N-terminal Tudor like domain J6625_03110 PF00176 SNF2 family N-terminal domain J6625_03110 PF12137 RNA polymerase recycling family C-terminal J6625_03110 PF00271 Helicase conserved C-terminal domain J6625_03150 PF00528 Binding-protein-dependent transport system inner membrane component J6625_03155 PF00528 Binding-protein-dependent transport system inner membrane component J6625_03160 PF00005 ABC transporter J6625_03160 PF12857 TOBE-like domain J6625_03165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_03165 PF03466 LysR substrate binding domain J6625_03170 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading J6625_03170 PF18416 N-acetylglucosamine binding protein domain 2 J6625_03175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_03175 PF17200 Single Cache domain 2 J6625_03175 PF00672 HAMP domain J6625_03200 PF11230 Protein of unknown function (DUF3029) J6625_03205 PF04055 Radical SAM superfamily J6625_03215 PF03466 LysR substrate binding domain J6625_03215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_03220 PF00155 Aminotransferase class I and II J6625_03225 PF11658 Cellulose biosynthesis protein BcsG J6625_03235 PF06564 Cellulose biosynthesis protein BcsQ J6625_03240 PF00535 Glycosyl transferase family 2 J6625_03240 PF07238 PilZ domain J6625_03245 PF03170 Bacterial cellulose synthase subunit J6625_03250 PF01270 Glycosyl hydrolases family 8 J6625_03255 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) J6625_03260 PF02583 Metal-sensitive transcriptional repressor J6625_03275 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J6625_03275 PF11852 Domain of unknown function (DUF3372) J6625_03275 PF03714 Bacterial pullanase-associated domain J6625_03275 PF18494 Pullulanase Ins domain J6625_03275 PF17967 Pullulanase N2 domain J6625_03280 PF00403 Heavy-metal-associated domain J6625_03285 PF08534 Redoxin J6625_03290 PF00270 DEAD/DEAH box helicase J6625_03290 PF00271 Helicase conserved C-terminal domain J6625_03295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_03295 PF08447 PAS fold J6625_03305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6625_03315 PF10952 Protein of unknown function (DUF2753) J6625_03320 PF00378 Enoyl-CoA hydratase/isomerase J6625_03335 PF00106 short chain dehydrogenase J6625_03340 PF00929 Exonuclease J6625_03345 PF04073 Aminoacyl-tRNA editing domain J6625_03345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J6625_03345 PF03129 Anticodon binding domain J6625_03350 PF00672 HAMP domain J6625_03350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_03355 PF07499 RuvA, C-terminal domain J6625_03355 PF01330 RuvA N terminal domain J6625_03360 PF17864 RuvB AAA lid domain J6625_03360 PF05496 Holliday junction DNA helicase RuvB P-loop domain J6625_03360 PF05491 RuvB C-terminal winged helix domain J6625_03370 PF01654 Cytochrome bd terminal oxidase subunit I J6625_03375 PF02322 Cytochrome bd terminal oxidase subunit II J6625_03380 PF08173 Membrane bound YbgT-like protein J6625_03385 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) J6625_03390 PF03061 Thioesterase superfamily J6625_03395 PF01618 MotA/TolQ/ExbB proton channel family J6625_03400 PF02472 Biopolymer transport protein ExbD/TolR J6625_03410 PF04052 TolB amino-terminal domain J6625_03410 PF07676 WD40-like Beta Propeller Repeat J6625_03415 PF00691 OmpA family J6625_03420 PF16331 TolA binding protein trimerisation J6625_03420 PF13174 Tetratricopeptide repeat J6625_03495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_03495 PF00672 HAMP domain J6625_03500 PF02445 Quinolinate synthetase A protein J6625_03505 PF01263 Aldose 1-epimerase J6625_03510 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J6625_03510 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J6625_03515 PF02446 4-alpha-glucanotransferase J6625_03520 PF00128 Alpha amylase, catalytic domain J6625_03520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J6625_03520 PF02806 Alpha amylase, C-terminal all-beta domain J6625_03525 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J6625_03525 PF00128 Alpha amylase, catalytic domain J6625_03530 PF01641 SelR domain J6625_03545 PF00293 NUDIX domain J6625_03550 PF00107 Zinc-binding dehydrogenase J6625_03550 PF16884 N-terminal domain of oxidoreductase J6625_03555 PF01047 MarR family J6625_03570 PF01037 Lrp/AsnC ligand binding domain J6625_03580 PF07690 Major Facilitator Superfamily J6625_03600 PF00209 Sodium:neurotransmitter symporter family J6625_03605 PF00209 Sodium:neurotransmitter symporter family J6625_03620 PF00155 Aminotransferase class I and II J6625_03620 PF00392 Bacterial regulatory proteins, gntR family J6625_03635 PF01177 Asp/Glu/Hydantoin racemase J6625_03645 PF00501 AMP-binding enzyme J6625_03655 PF00583 Acetyltransferase (GNAT) family J6625_03665 PF17868 AAA lid domain J6625_03665 PF12592 Protein of unknown function (DUF3763) J6625_03665 PF07728 AAA domain (dynein-related subfamily) J6625_03670 PF05762 VWA domain containing CoxE-like protein J6625_03675 PF08448 PAS fold J6625_03675 PF00563 EAL domain J6625_03675 PF00990 Diguanylate cyclase, GGDEF domain J6625_03680 PF00990 Diguanylate cyclase, GGDEF domain J6625_03680 PF00072 Response regulator receiver domain J6625_03685 PF00009 Elongation factor Tu GTP binding domain J6625_03685 PF16658 Class II release factor RF3, C-terminal domain J6625_03685 PF03144 Elongation factor Tu domain 2 J6625_03695 PF00583 Acetyltransferase (GNAT) family J6625_03700 PF12804 MobA-like NTP transferase domain J6625_03700 PF00132 Bacterial transferase hexapeptide (six repeats) J6625_03705 PF00583 Acetyltransferase (GNAT) family J6625_03710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J6625_03720 PF04480 Protein of unknown function (DUF559) J6625_03725 PF03466 LysR substrate binding domain J6625_03725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_03730 PF04371 Porphyromonas-type peptidyl-arginine deiminase J6625_03735 PF01425 Amidase J6625_03750 PF13592 Winged helix-turn helix J6625_03750 PF13358 DDE superfamily endonuclease J6625_03775 PF12833 Helix-turn-helix domain J6625_03775 PF02311 AraC-like ligand binding domain J6625_03780 PF00175 Oxidoreductase NAD-binding domain J6625_03780 PF00111 2Fe-2S iron-sulfur cluster binding domain J6625_03780 PF00970 Oxidoreductase FAD-binding domain J6625_03785 PF00271 Helicase conserved C-terminal domain J6625_03785 PF00270 DEAD/DEAH box helicase J6625_03790 PF00990 Diguanylate cyclase, GGDEF domain J6625_03795 PF05643 Putative bacterial lipoprotein (DUF799) J6625_03805 PF03783 Curli production assembly/transport component CsgG J6625_03825 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase J6625_03835 PF00005 ABC transporter J6625_03835 PF12704 MacB-like periplasmic core domain J6625_03835 PF02687 FtsX-like permease family J6625_03840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6625_03845 PF00072 Response regulator receiver domain J6625_03845 PF00486 Transcriptional regulatory protein, C terminal J6625_03850 PF16527 Two-component sensor protein CpxA, periplasmic domain J6625_03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_03850 PF00512 His Kinase A (phospho-acceptor) domain J6625_03850 PF00672 HAMP domain J6625_03870 PF00445 Ribonuclease T2 family J6625_03875 PF03060 Nitronate monooxygenase J6625_03900 PF01810 LysE type translocator J6625_03905 PF02954 Bacterial regulatory protein, Fis family J6625_03910 PF01207 Dihydrouridine synthase (Dus) J6625_03920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6625_03950 PF00072 Response regulator receiver domain J6625_03955 PF00854 POT family J6625_03960 PF00483 Nucleotidyl transferase J6625_03970 PF00459 Inositol monophosphatase family J6625_03975 PF03795 YCII-related domain J6625_03980 PF04279 Intracellular septation protein A J6625_03985 PF00282 Pyridoxal-dependent decarboxylase conserved domain J6625_03990 PF03006 Haemolysin-III related J6625_03995 PF06826 Predicted Permease Membrane Region J6625_03995 PF02080 TrkA-C domain J6625_04010 PF07690 Major Facilitator Superfamily J6625_04015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_04015 PF03466 LysR substrate binding domain J6625_04020 PF04151 Bacterial pre-peptidase C-terminal domain J6625_04020 PF02868 Thermolysin metallopeptidase, alpha-helical domain J6625_04020 PF07504 Fungalysin/Thermolysin Propeptide Motif J6625_04020 PF01447 Thermolysin metallopeptidase, catalytic domain J6625_04020 PF03413 Peptidase propeptide and YPEB domain J6625_04025 PF13302 Acetyltransferase (GNAT) domain J6625_04030 PF13302 Acetyltransferase (GNAT) domain J6625_04040 PF04074 YhcH/YjgK/YiaL J6625_04045 PF00871 Acetokinase family J6625_04050 PF00924 Mechanosensitive ion channel J6625_04055 PF17969 L,D-transpeptidase C-terminal domain J6625_04055 PF03734 L,D-transpeptidase catalytic domain J6625_04060 PF00474 Sodium:solute symporter family J6625_04070 PF13411 MerR HTH family regulatory protein J6625_04080 PF01695 IstB-like ATP binding protein J6625_04085 PF00665 Integrase core domain J6625_04115 PF02525 Flavodoxin-like fold J6625_04120 PF03466 LysR substrate binding domain J6625_04120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_04125 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J6625_04135 PF00005 ABC transporter J6625_04135 PF12848 ABC transporter J6625_04140 PF00571 CBS domain J6625_04140 PF00478 IMP dehydrogenase / GMP reductase domain J6625_04145 PF00267 Gram-negative porin J6625_04150 PF00072 Response regulator receiver domain J6625_04150 PF01584 CheW-like domain J6625_04155 PF13472 GDSL-like Lipase/Acylhydrolase family J6625_04160 PF00005 ABC transporter J6625_04170 PF01370 NAD dependent epimerase/dehydratase family J6625_04170 PF08338 Domain of unknown function (DUF1731) J6625_04175 PF00563 EAL domain J6625_04175 PF12792 CSS motif domain associated with EAL J6625_04180 PF00155 Aminotransferase class I and II J6625_04185 PF01483 Proprotein convertase P-domain J6625_04185 PF04389 Peptidase family M28 J6625_04190 PF02390 Putative methyltransferase J6625_04195 PF04320 Protein with unknown function (DUF469) J6625_04200 PF04960 Glutaminase J6625_04205 PF00581 Rhodanese-like domain J6625_04210 PF06004 Bacterial protein of unknown function (DUF903) J6625_04215 PF00005 ABC transporter J6625_04215 PF00664 ABC transporter transmembrane region J6625_04220 PF00561 alpha/beta hydrolase fold J6625_04240 PF06877 Regulator of ribonuclease activity B J6625_04245 PF13006 Insertion element 4 transposase N-terminal J6625_04245 PF01609 Transposase DDE domain J6625_04250 PF00563 EAL domain J6625_04250 PF03707 Bacterial signalling protein N terminal repeat J6625_04250 PF00990 Diguanylate cyclase, GGDEF domain J6625_04270 PF09905 DNA-binding protein VF530 J6625_04275 PF02666 Phosphatidylserine decarboxylase J6625_04280 PF03193 RsgA GTPase J6625_04285 PF00929 Exonuclease J6625_04325 PF00313 'Cold-shock' DNA-binding domain J6625_04335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_04335 PF00672 HAMP domain J6625_04340 PF00749 tRNA synthetases class I (E and Q), catalytic domain J6625_04345 PF13006 Insertion element 4 transposase N-terminal J6625_04345 PF01609 Transposase DDE domain J6625_04380 PF06483 Chitinase C J6625_04380 PF00704 Glycosyl hydrolases family 18 J6625_04395 PF02472 Biopolymer transport protein ExbD/TolR J6625_04400 PF01618 MotA/TolQ/ExbB proton channel family J6625_04405 PF01618 MotA/TolQ/ExbB proton channel family J6625_04415 PF00593 TonB dependent receptor J6625_04415 PF07715 TonB-dependent Receptor Plug Domain J6625_04420 PF00528 Binding-protein-dependent transport system inner membrane component J6625_04425 PF00528 Binding-protein-dependent transport system inner membrane component J6625_04425 PF12911 N-terminal TM domain of oligopeptide transport permease C J6625_04430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6625_04435 PF00005 ABC transporter J6625_04435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6625_04440 PF00005 ABC transporter J6625_04440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6625_04445 PF07687 Peptidase dimerisation domain J6625_04445 PF01546 Peptidase family M20/M25/M40 J6625_04450 PF00156 Phosphoribosyl transferase domain J6625_04455 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) J6625_04460 PF07417 Sigma factor-binding transcriptional regulator Crl J6625_04465 PF00696 Amino acid kinase family J6625_04465 PF01472 PUA domain J6625_04470 PF00171 Aldehyde dehydrogenase family J6625_04480 PF00582 Universal stress protein family J6625_04500 PF01568 Molydopterin dinucleotide binding domain J6625_04500 PF00384 Molybdopterin oxidoreductase J6625_04500 PF04324 BFD-like [2Fe-2S] binding domain J6625_04500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J6625_04505 PF10414 Sirohaem synthase dimerisation region J6625_04505 PF14824 Sirohaem biosynthesis protein central J6625_04505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J6625_04515 PF00005 ABC transporter J6625_04520 PF00528 Binding-protein-dependent transport system inner membrane component J6625_04525 PF00005 ABC transporter J6625_04530 PF04324 BFD-like [2Fe-2S] binding domain J6625_04530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J6625_04530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J6625_04530 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_04530 PF13806 Rieske-like [2Fe-2S] domain J6625_04530 PF18267 Rubredoxin NAD+ reductase C-terminal domain J6625_04535 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_04535 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J6625_04535 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J6625_04535 PF18267 Rubredoxin NAD+ reductase C-terminal domain J6625_04535 PF13806 Rieske-like [2Fe-2S] domain J6625_04535 PF04324 BFD-like [2Fe-2S] binding domain J6625_04540 PF00294 pfkB family carbohydrate kinase J6625_04545 PF04227 Indigoidine synthase A like protein J6625_04550 PF04227 Indigoidine synthase A like protein J6625_04560 PF00194 Eukaryotic-type carbonic anhydrase J6625_04575 PF00994 Probable molybdopterin binding domain J6625_04590 PF06738 Putative threonine/serine exporter J6625_04595 PF12821 Threonine/Serine exporter, ThrE J6625_04600 PF00186 Dihydrofolate reductase J6625_04605 PF00005 ABC transporter J6625_04605 PF00571 CBS domain J6625_04610 PF00528 Binding-protein-dependent transport system inner membrane component J6625_04615 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J6625_04620 PF01507 Phosphoadenosine phosphosulfate reductase family J6625_04625 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J6625_04625 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J6625_04630 PF00667 FAD binding domain J6625_04630 PF00258 Flavodoxin J6625_04630 PF00175 Oxidoreductase NAD-binding domain J6625_04635 PF02567 Phenazine biosynthesis-like protein J6625_04640 PF00152 tRNA synthetases class II (D, K and N) J6625_04640 PF01336 OB-fold nucleic acid binding domain J6625_04650 PF00672 HAMP domain J6625_04650 PF02743 Cache domain J6625_04650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_04655 PF13006 Insertion element 4 transposase N-terminal J6625_04655 PF01609 Transposase DDE domain J6625_04660 PF03616 Sodium/glutamate symporter J6625_04665 PF00710 Asparaginase, N-terminal J6625_04665 PF17763 Glutaminase/Asparaginase C-terminal domain J6625_04670 PF07023 Protein of unknown function (DUF1315) J6625_04675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J6625_04675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J6625_04690 PF01343 Peptidase family S49 J6625_04695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J6625_04695 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_04700 PF00881 Nitroreductase family J6625_04705 PF02743 Cache domain J6625_04705 PF00672 HAMP domain J6625_04705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_04710 PF00132 Bacterial transferase hexapeptide (six repeats) J6625_04710 PF12464 Maltose acetyltransferase J6625_04720 PF08240 Alcohol dehydrogenase GroES-like domain J6625_04720 PF00107 Zinc-binding dehydrogenase J6625_04725 PF03466 LysR substrate binding domain J6625_04725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_04730 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J6625_04730 PF00367 phosphotransferase system, EIIB J6625_04730 PF02378 Phosphotransferase system, EIIC J6625_04735 PF00474 Sodium:solute symporter family J6625_04740 PF06196 Protein of unknown function (DUF997) J6625_04745 PF02785 Biotin carboxylase C-terminal domain J6625_04745 PF00289 Biotin carboxylase, N-terminal domain J6625_04745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J6625_04750 PF00364 Biotin-requiring enzyme J6625_04755 PF01220 Dehydroquinase class II J6625_04760 PF16177 Acetyl-coenzyme A synthetase N-terminus J6625_04760 PF00501 AMP-binding enzyme J6625_04760 PF13193 AMP-binding enzyme C-terminal domain J6625_04765 PF00563 EAL domain J6625_04765 PF03707 Bacterial signalling protein N terminal repeat J6625_04765 PF00990 Diguanylate cyclase, GGDEF domain J6625_04775 PF02613 Nitrate reductase delta subunit J6625_04785 PF00464 Serine hydroxymethyltransferase J6625_04795 PF03477 ATP cone domain J6625_04800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J6625_04800 PF01872 RibD C-terminal domain J6625_04805 PF00677 Lumazine binding domain J6625_04810 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J6625_04810 PF00925 GTP cyclohydrolase II J6625_04815 PF00885 6,7-dimethyl-8-ribityllumazine synthase J6625_04820 PF01029 NusB family J6625_04825 PF00586 AIR synthase related protein, N-terminal domain J6625_04825 PF02769 AIR synthase related protein, C-terminal domain J6625_04830 PF04608 Phosphatidylglycerophosphatase A J6625_04835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6625_04835 PF00005 ABC transporter J6625_04840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6625_04845 PF00528 Binding-protein-dependent transport system inner membrane component J6625_04850 PF00528 Binding-protein-dependent transport system inner membrane component J6625_04850 PF12911 N-terminal TM domain of oligopeptide transport permease C J6625_04855 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J6625_04855 PF02779 Transketolase, pyrimidine binding domain J6625_04855 PF02780 Transketolase, C-terminal domain J6625_04860 PF00348 Polyprenyl synthetase J6625_04865 PF02609 Exonuclease VII small subunit J6625_04870 PF01618 MotA/TolQ/ExbB proton channel family J6625_04875 PF00691 OmpA family J6625_04875 PF13677 Membrane MotB of proton-channel complex MotA/MotB J6625_04880 PF01272 Transcription elongation factor, GreA/GreB, C-term J6625_04880 PF03449 Transcription elongation factor, N-terminal J6625_04890 PF01985 CRS1 / YhbY (CRM) domain J6625_04895 PF01728 FtsJ-like methyltransferase J6625_04900 PF00004 ATPase family associated with various cellular activities (AAA) J6625_04900 PF17862 AAA+ lid domain J6625_04900 PF06480 FtsH Extracellular J6625_04900 PF01434 Peptidase family M41 J6625_04905 PF00809 Pterin binding enzyme J6625_04910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J6625_04910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J6625_04910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J6625_04910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J6625_04915 PF00121 Triosephosphate isomerase J6625_04920 PF03840 Preprotein translocase SecG subunit J6625_04935 PF02576 RimP N-terminal domain J6625_04935 PF17384 RimP C-terminal SH3 domain J6625_04940 PF13184 NusA-like KH domain J6625_04940 PF08529 NusA N-terminal domain J6625_04940 PF00575 S1 RNA binding domain J6625_04945 PF00009 Elongation factor Tu GTP binding domain J6625_04945 PF11987 Translation-initiation factor 2 J6625_04945 PF08364 Bacterial translation initiation factor IF-2 associated region J6625_04945 PF04760 Translation initiation factor IF-2, N-terminal region J6625_04950 PF02033 Ribosome-binding factor A J6625_04955 PF01509 TruB family pseudouridylate synthase (N terminal domain) J6625_04955 PF16198 tRNA pseudouridylate synthase B C-terminal domain J6625_04955 PF09157 Pseudouridine synthase II TruB, C-terminal J6625_04960 PF00312 Ribosomal protein S15 J6625_04965 PF03725 3' exoribonuclease family, domain 2 J6625_04965 PF00575 S1 RNA binding domain J6625_04965 PF01138 3' exoribonuclease family, domain 1 J6625_04965 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J6625_04965 PF00013 KH domain J6625_04970 PF07690 Major Facilitator Superfamily J6625_04975 PF02635 DsrE/DsrF-like family J6625_04980 PF06476 Protein of unknown function (DUF1090) J6625_04985 PF12838 4Fe-4S dicluster domain J6625_04990 PF01136 Peptidase family U32 J6625_04990 PF16325 Peptidase family U32 C-terminal domain J6625_04995 PF03734 L,D-transpeptidase catalytic domain J6625_04995 PF17969 L,D-transpeptidase C-terminal domain J6625_05010 PF01523 Putative modulator of DNA gyrase J6625_05015 PF01523 Putative modulator of DNA gyrase J6625_05020 PF00258 Flavodoxin J6625_05025 PF02899 Phage integrase, N-terminal SAM-like domain J6625_05025 PF00589 Phage integrase family J6625_05030 PF01741 Large-conductance mechanosensitive channel, MscL J6625_05040 PF17768 RecJ OB domain J6625_05040 PF02272 DHHA1 domain J6625_05040 PF01368 DHH family J6625_05045 PF13411 MerR HTH family regulatory protein J6625_05060 PF02508 Rnf-Nqr subunit, membrane protein J6625_05070 PF04055 Radical SAM superfamily J6625_05070 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J6625_05075 PF03099 Biotin/lipoate A/B protein ligase family J6625_05080 PF04359 Protein of unknown function (DUF493) J6625_05085 PF00768 D-alanyl-D-alanine carboxypeptidase J6625_05085 PF07943 Penicillin-binding protein 5, C-terminal domain J6625_05090 PF03330 Lytic transglycolase J6625_05090 PF05036 Sporulation related domain J6625_05095 PF13406 Transglycosylase SLT domain J6625_05100 PF01098 Cell cycle protein J6625_05105 PF03717 Penicillin-binding Protein dimerisation domain J6625_05105 PF00905 Penicillin binding protein transpeptidase domain J6625_05110 PF02590 Predicted SPOUT methyltransferase J6625_05120 PF01467 Cytidylyltransferase-like J6625_05140 PF08264 Anticodon-binding domain of tRNA J6625_05140 PF00133 tRNA synthetases class I (I, L, M and V) J6625_05140 PF13603 Leucyl-tRNA synthetase, Domain 2 J6625_05145 PF07295 Zinc-ribbon containing domain J6625_05150 PF00795 Carbon-nitrogen hydrolase J6625_05155 PF03471 Transporter associated domain J6625_05155 PF00571 CBS domain J6625_05160 PF02130 Uncharacterized protein family UPF0054 J6625_05165 PF02562 PhoH-like protein J6625_05170 PF01938 TRAM domain J6625_05170 PF00919 Uncharacterized protein family UPF0004 J6625_05170 PF04055 Radical SAM superfamily J6625_05175 PF01494 FAD binding domain J6625_05180 PF00857 Isochorismatase family J6625_05185 PF00313 'Cold-shock' DNA-binding domain J6625_05190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_05190 PF03466 LysR substrate binding domain J6625_05200 PF13419 Haloacid dehalogenase-like hydrolase J6625_05205 PF00990 Diguanylate cyclase, GGDEF domain J6625_05215 PF17152 Periplasmic sensor domain J6625_05215 PF00990 Diguanylate cyclase, GGDEF domain J6625_05225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J6625_05225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J6625_05235 PF14226 non-haem dioxygenase in morphine synthesis N-terminal J6625_05235 PF03171 2OG-Fe(II) oxygenase superfamily J6625_05240 PF03180 NLPA lipoprotein J6625_05245 PF00005 ABC transporter J6625_05245 PF09383 NIL domain J6625_05250 PF00528 Binding-protein-dependent transport system inner membrane component J6625_05255 PF09285 Elongation factor P, C-terminal J6625_05255 PF08207 Elongation factor P (EF-P) KOW-like domain J6625_05255 PF01132 Elongation factor P (EF-P) OB domain J6625_05265 PF00478 IMP dehydrogenase / GMP reductase domain J6625_05270 PF08443 RimK-like ATP-grasp domain J6625_05270 PF18030 RimK PreATP-grasp domain J6625_05275 PF00512 His Kinase A (phospho-acceptor) domain J6625_05275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_05275 PF08521 Two-component sensor kinase N-terminal J6625_05280 PF00486 Transcriptional regulatory protein, C terminal J6625_05280 PF00072 Response regulator receiver domain J6625_05290 PF00106 short chain dehydrogenase J6625_05300 PF00501 AMP-binding enzyme J6625_05310 PF13847 Methyltransferase domain J6625_05315 PF06224 Winged helix DNA-binding domain J6625_05330 PF02313 Fumarate reductase subunit D J6625_05335 PF02300 Fumarate reductase subunit C J6625_05340 PF13183 4Fe-4S dicluster domain J6625_05340 PF13085 2Fe-2S iron-sulfur cluster binding domain J6625_05345 PF02910 Fumarate reductase flavoprotein C-term J6625_05345 PF00890 FAD binding domain J6625_05350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_05350 PF00672 HAMP domain J6625_05350 PF02743 Cache domain J6625_05355 PF03009 Glycerophosphoryl diester phosphodiesterase family J6625_05360 PF12794 Mechanosensitive ion channel inner membrane domain 1 J6625_05360 PF00924 Mechanosensitive ion channel J6625_05360 PF12795 Mechanosensitive ion channel porin domain J6625_05370 PF01476 LysM domain J6625_05370 PF08525 Opacity-associated protein A N-terminal motif J6625_05370 PF01551 Peptidase family M23 J6625_05385 PF03466 LysR substrate binding domain J6625_05385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_05400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_05400 PF03466 LysR substrate binding domain J6625_05405 PF17092 Penicillin-binding protein OB-like domain J6625_05405 PF00912 Transglycosylase J6625_05405 PF00905 Penicillin binding protein transpeptidase domain J6625_05410 PF11104 Type IV pilus assembly protein PilM; J6625_05420 PF04350 Pilus assembly protein, PilO J6625_05430 PF11741 AMIN domain J6625_05430 PF00263 Bacterial type II and III secretion system protein J6625_05430 PF03958 Bacterial type II/III secretion system short domain J6625_05430 PF07660 Secretin and TonB N terminus short domain J6625_05435 PF01202 Shikimate kinase J6625_05440 PF01761 3-dehydroquinate synthase J6625_05445 PF05036 Sporulation related domain J6625_05450 PF02086 D12 class N6 adenine-specific DNA methyltransferase J6625_05455 PF00834 Ribulose-phosphate 3 epimerase family J6625_05460 PF13419 Haloacid dehalogenase-like hydrolase J6625_05465 PF00579 tRNA synthetases class I (W and Y) J6625_05475 PF00117 Glutamine amidotransferase class-I J6625_05480 PF00202 Aminotransferase class-III J6625_05485 PF04958 Arginine N-succinyltransferase beta subunit J6625_05490 PF00171 Aldehyde dehydrogenase family J6625_05520 PF13419 Haloacid dehalogenase-like hydrolase J6625_05525 PF07690 Major Facilitator Superfamily J6625_05535 PF07859 alpha/beta hydrolase fold J6625_05540 PF04266 ASCH domain J6625_05545 PF03600 Citrate transporter J6625_05545 PF02080 TrkA-C domain J6625_05590 PF01926 50S ribosome-binding GTPase J6625_05590 PF06071 Protein of unknown function (DUF933) J6625_05595 PF01195 Peptidyl-tRNA hydrolase J6625_05600 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J6625_05600 PF14572 Phosphoribosyl synthetase-associated domain J6625_05610 PF00288 GHMP kinases N terminal domain J6625_05610 PF08544 GHMP kinases C terminal J6625_05615 PF03550 Outer membrane lipoprotein LolB J6625_05620 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J6625_05620 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J6625_05620 PF01488 Shikimate / quinate 5-dehydrogenase J6625_05625 PF03462 PCRF domain J6625_05625 PF00472 RF-1 domain J6625_05630 PF13847 Methyltransferase domain J6625_05630 PF17827 PrmC N-terminal domain J6625_05640 PF13369 Transglutaminase-like superfamily J6625_05645 PF00793 DAHP synthetase I family J6625_05650 PF00375 Sodium:dicarboxylate symporter family J6625_05655 PF01228 Glycine radical J6625_05660 PF03167 Uracil DNA glycosylase superfamily J6625_05675 PF00923 Transaldolase/Fructose-6-phosphate aldolase J6625_05680 PF01235 Sodium:alanine symporter family J6625_05685 PF00144 Beta-lactamase J6625_05690 PF07690 Major Facilitator Superfamily J6625_05695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_05695 PF03466 LysR substrate binding domain J6625_05700 PF03652 Holliday junction resolvase J6625_05705 PF02622 Uncharacterized ACR, COG1678 J6625_05710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J6625_05710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J6625_05715 PF04452 RNA methyltransferase J6625_05720 PF04231 Endonuclease I J6625_05725 PF10263 SprT-like family J6625_05725 PF17283 SprT-like zinc ribbon domain J6625_05730 PF00438 S-adenosylmethionine synthetase, N-terminal domain J6625_05730 PF02772 S-adenosylmethionine synthetase, central domain J6625_05730 PF02773 S-adenosylmethionine synthetase, C-terminal domain J6625_05735 PF02779 Transketolase, pyrimidine binding domain J6625_05735 PF00456 Transketolase, thiamine diphosphate binding domain J6625_05735 PF02780 Transketolase, C-terminal domain J6625_05750 PF01042 Endoribonuclease L-PSP J6625_05765 PF03702 Anhydro-N-acetylmuramic acid kinase J6625_05770 PF01551 Peptidase family M23 J6625_05770 PF08525 Opacity-associated protein A N-terminal motif J6625_05770 PF01476 LysM domain J6625_05775 PF00579 tRNA synthetases class I (W and Y) J6625_05780 PF01204 Trehalase J6625_05790 PF01161 Phosphatidylethanolamine-binding protein J6625_05795 PF00709 Adenylosuccinate synthetase J6625_05800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_05800 PF03466 LysR substrate binding domain J6625_05810 PF00155 Aminotransferase class I and II J6625_05815 PF07690 Major Facilitator Superfamily J6625_05820 PF03466 LysR substrate binding domain J6625_05820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_05825 PF00106 short chain dehydrogenase J6625_05830 PF08496 Peptidase family S49 N-terminal J6625_05830 PF01343 Peptidase family S49 J6625_05835 PF04996 Succinylarginine dihydrolase J6625_05840 PF01751 Toprim domain J6625_05840 PF01131 DNA topoisomerase J6625_05840 PF08272 Topoisomerase I zinc-ribbon-like J6625_05840 PF01396 Topoisomerase DNA binding C4 zinc finger J6625_05855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_05855 PF08447 PAS fold J6625_05860 PF02838 Glycosyl hydrolase family 20, domain 2 J6625_05860 PF00728 Glycosyl hydrolase family 20, catalytic domain J6625_05865 PF01869 BadF/BadG/BcrA/BcrD ATPase family J6625_05875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6625_05875 PF00005 ABC transporter J6625_05880 PF00005 ABC transporter J6625_05880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6625_05885 PF00528 Binding-protein-dependent transport system inner membrane component J6625_05885 PF12911 N-terminal TM domain of oligopeptide transport permease C J6625_05890 PF00528 Binding-protein-dependent transport system inner membrane component J6625_05895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6625_05900 PF04055 Radical SAM superfamily J6625_05900 PF18693 TRAM domain J6625_05900 PF00919 Uncharacterized protein family UPF0004 J6625_05905 PF01609 Transposase DDE domain J6625_05905 PF05598 Transposase domain (DUF772) J6625_05910 PF00872 Transposase, Mutator family J6625_05915 PF13426 PAS domain J6625_05915 PF08447 PAS fold J6625_05915 PF05231 MASE1 J6625_05915 PF08448 PAS fold J6625_05915 PF00990 Diguanylate cyclase, GGDEF domain J6625_05915 PF00563 EAL domain J6625_05920 PF13592 Winged helix-turn helix J6625_05920 PF13358 DDE superfamily endonuclease J6625_05965 PF01527 Transposase J6625_05985 PF00376 MerR family regulatory protein J6625_05985 PF09278 MerR, DNA binding J6625_05990 PF02411 MerT mercuric transport protein J6625_05995 PF00403 Heavy-metal-associated domain J6625_06005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J6625_06005 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_06005 PF00403 Heavy-metal-associated domain J6625_06010 PF13411 MerR HTH family regulatory protein J6625_06015 PF05052 MerE protein J6625_06020 PF02796 Helix-turn-helix domain of resolvase J6625_06020 PF00239 Resolvase, N terminal domain J6625_06040 PF01252 Signal peptidase (SPase) II J6625_06045 PF00403 Heavy-metal-associated domain J6625_06050 PF13411 MerR HTH family regulatory protein J6625_06055 PF00816 H-NS histone family J6625_06065 PF09722 Protein of unknown function (DUF2384) J6625_06070 PF01219 Prokaryotic diacylglycerol kinase J6625_06075 PF00884 Sulfatase J6625_06075 PF08019 Phosphoethanolamine transferase EptA/EptB J6625_06080 PF00884 Sulfatase J6625_06080 PF08019 Phosphoethanolamine transferase EptA/EptB J6625_06085 PF00892 EamA-like transporter family J6625_06115 PF00665 Integrase core domain J6625_06120 PF01695 IstB-like ATP binding protein J6625_06195 PF00072 Response regulator receiver domain J6625_06200 PF01022 Bacterial regulatory protein, arsR family J6625_06205 PF01758 Sodium Bile acid symporter family J6625_06210 PF03960 ArsC family J6625_06220 PF02049 Flagellar hook-basal body complex protein FliE J6625_06225 PF08345 Flagellar M-ring protein C-terminal J6625_06225 PF01514 Secretory protein of YscJ/FliF family J6625_06230 PF14842 FliG N-terminal domain J6625_06230 PF14841 FliG middle domain J6625_06230 PF01706 FliG C-terminal domain J6625_06240 PF18269 T3SS EscN ATPase C-terminal domain J6625_06240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J6625_06260 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J6625_06260 PF02154 Flagellar motor switch protein FliM J6625_06265 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J6625_06270 PF04347 Flagellar biosynthesis protein, FliO J6625_06275 PF00813 FliP family J6625_06280 PF01313 Bacterial export proteins, family 3 J6625_06285 PF01311 Bacterial export proteins, family 1 J6625_06290 PF01312 FlhB HrpN YscU SpaS Family J6625_06295 PF00771 FHIPEP family J6625_06300 PF00448 SRP54-type protein, GTPase domain J6625_06305 PF10609 NUBPL iron-transfer P-loop NTPase J6625_06310 PF04545 Sigma-70, region 4 J6625_06310 PF04539 Sigma-70 region 3 J6625_06310 PF04542 Sigma-70 region 2 J6625_06315 PF00072 Response regulator receiver domain J6625_06320 PF04344 Chemotaxis phosphatase, CheZ J6625_06325 PF01627 Hpt domain J6625_06325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_06325 PF01584 CheW-like domain J6625_06325 PF02895 Signal transducing histidine kinase, homodimeric domain J6625_06325 PF00072 Response regulator receiver domain J6625_06330 PF01339 CheB methylesterase J6625_06330 PF00072 Response regulator receiver domain J6625_06335 PF01618 MotA/TolQ/ExbB proton channel family J6625_06340 PF00691 OmpA family J6625_06340 PF13677 Membrane MotB of proton-channel complex MotA/MotB J6625_06345 PF13614 AAA domain J6625_06355 PF01584 CheW-like domain J6625_06365 PF00005 ABC transporter J6625_06370 PF03379 CcmB protein J6625_06375 PF01578 Cytochrome C assembly protein J6625_06380 PF04995 Heme exporter protein D (CcmD) J6625_06385 PF03100 CcmE J6625_06390 PF01578 Cytochrome C assembly protein J6625_06390 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J6625_06395 PF08534 Redoxin J6625_06400 PF03918 Cytochrome C biogenesis protein J6625_06410 PF04333 MlaA lipoprotein J6625_06415 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J6625_06415 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J6625_06420 PF00462 Glutaredoxin J6625_06425 PF01189 16S rRNA methyltransferase RsmB/F J6625_06425 PF01029 NusB family J6625_06440 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J6625_06440 PF01243 Pyridoxamine 5'-phosphate oxidase J6625_06450 PF01546 Peptidase family M20/M25/M40 J6625_06470 PF13508 Acetyltransferase (GNAT) domain J6625_06485 PF01081 KDPG and KHG aldolase J6625_06490 PF00294 pfkB family carbohydrate kinase J6625_06495 PF10688 Bacterial inner membrane protein J6625_06500 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus J6625_06500 PF08666 SAF domain J6625_06505 PF01232 Mannitol dehydrogenase Rossmann domain J6625_06505 PF08125 Mannitol dehydrogenase C-terminal domain J6625_06510 PF02614 Glucuronate isomerase J6625_06515 PF03480 Bacterial extracellular solute-binding protein, family 7 J6625_06525 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J6625_06530 PF07729 FCD domain J6625_06530 PF00392 Bacterial regulatory proteins, gntR family J6625_06570 PF01609 Transposase DDE domain J6625_06570 PF05598 Transposase domain (DUF772) J6625_06595 PF00816 H-NS histone family J6625_06600 PF01695 IstB-like ATP binding protein J6625_06605 PF00665 Integrase core domain J6625_06625 PF09722 Protein of unknown function (DUF2384) J6625_06630 PF08007 Cupin superfamily protein J6625_06635 PF05711 Macrocin-O-methyltransferase (TylF) J6625_06665 PF01695 IstB-like ATP binding protein J6625_06710 PF01668 SmpB protein J6625_06715 PF03364 Polyketide cyclase / dehydrase and lipid transport J6625_06720 PF03658 RnfH family Ubiquitin J6625_06725 PF13460 NAD(P)H-binding J6625_06730 PF04355 SmpA / OmlA family J6625_06735 PF00465 Iron-containing alcohol dehydrogenase J6625_06740 PF01048 Phosphorylase superfamily J6625_06745 PF00849 RNA pseudouridylate synthase J6625_06750 PF01156 Inosine-uridine preferring nucleoside hydrolase J6625_06765 PF07509 Protein of unknown function (DUF1523) J6625_06770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_06770 PF00672 HAMP domain J6625_06775 PF01810 LysE type translocator J6625_06785 PF03471 Transporter associated domain J6625_06785 PF00999 Sodium/hydrogen exchanger family J6625_06785 PF02080 TrkA-C domain J6625_06795 PF02557 D-alanyl-D-alanine carboxypeptidase J6625_06800 PF07687 Peptidase dimerisation domain J6625_06800 PF01546 Peptidase family M20/M25/M40 J6625_06805 PF03960 ArsC family J6625_06815 PF03606 C4-dicarboxylate anaerobic carrier J6625_06820 PF07687 Peptidase dimerisation domain J6625_06820 PF01546 Peptidase family M20/M25/M40 J6625_06830 PF03605 Anaerobic c4-dicarboxylate membrane transporter J6625_06835 PF00152 tRNA synthetases class II (D, K and N) J6625_06835 PF01336 OB-fold nucleic acid binding domain J6625_06850 PF00202 Aminotransferase class-III J6625_06855 PF06968 Biotin and Thiamin Synthesis associated domain J6625_06855 PF04055 Radical SAM superfamily J6625_06860 PF00155 Aminotransferase class I and II J6625_06865 PF12697 Alpha/beta hydrolase family J6625_06865 PF08241 Methyltransferase domain J6625_06875 PF01435 Peptidase family M48 J6625_06880 PF03473 MOSC domain J6625_06880 PF00111 2Fe-2S iron-sulfur cluster binding domain J6625_06880 PF00111 2Fe-2S iron-sulfur cluster binding domain J6625_06880 PF03476 MOSC N-terminal beta barrel domain J6625_06880 PF03473 MOSC domain J6625_06880 PF03476 MOSC N-terminal beta barrel domain J6625_06885 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_06885 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J6625_06885 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J6625_06890 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg J6625_06890 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase J6625_06890 PF10371 Domain of unknown function J6625_06890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J6625_06890 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II J6625_06895 PF04325 Protein of unknown function (DUF465) J6625_06905 PF01554 MatE J6625_06925 PF00291 Pyridoxal-phosphate dependent enzyme J6625_06930 PF00465 Iron-containing alcohol dehydrogenase J6625_06940 PF08359 YsiA-like protein, C-terminal region J6625_06940 PF00440 Bacterial regulatory proteins, tetR family J6625_06945 PF00171 Aldehyde dehydrogenase family J6625_06955 PF00877 NlpC/P60 family J6625_06960 PF03466 LysR substrate binding domain J6625_06960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_06980 PF08003 Protein of unknown function (DUF1698) J6625_06985 PF13649 Methyltransferase domain J6625_06990 PF01904 Protein of unknown function DUF72 J6625_06995 PF01336 OB-fold nucleic acid binding domain J6625_06995 PF00152 tRNA synthetases class II (D, K and N) J6625_06995 PF02938 GAD domain J6625_07000 PF01709 Transcriptional regulator J6625_07005 PF08019 Phosphoethanolamine transferase EptA/EptB J6625_07005 PF00884 Sulfatase J6625_07010 PF01047 MarR family J6625_07010 PF00480 ROK family J6625_07015 PF01979 Amidohydrolase family J6625_07020 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J6625_07025 PF00367 phosphotransferase system, EIIB J6625_07025 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J6625_07025 PF02378 Phosphotransferase system, EIIC J6625_07030 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain J6625_07030 PF00728 Glycosyl hydrolase family 20, catalytic domain J6625_07030 PF03173 Putative carbohydrate binding domain J6625_07030 PF02838 Glycosyl hydrolase family 20, domain 2 J6625_07035 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J6625_07035 PF00749 tRNA synthetases class I (E and Q), catalytic domain J6625_07040 PF01475 Ferric uptake regulator family J6625_07050 PF00258 Flavodoxin J6625_07055 PF01402 Ribbon-helix-helix protein, copG family J6625_07065 PF12697 Alpha/beta hydrolase family J6625_07070 PF03925 SeqA protein C-terminal domain J6625_07070 PF17206 SeqA protein N-terminal domain J6625_07075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J6625_07075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J6625_07075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J6625_07075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J6625_07085 PF01047 MarR family J6625_07090 PF13406 Transglycosylase SLT domain J6625_07095 PF01066 CDP-alcohol phosphatidyltransferase J6625_07100 PF00005 ABC transporter J6625_07110 PF13416 Bacterial extracellular solute-binding protein J6625_07115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J6625_07115 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_07115 PF00403 Heavy-metal-associated domain J6625_07120 PF02627 Carboxymuconolactone decarboxylase family J6625_07140 PF07244 Surface antigen variable number repeat J6625_07140 PF01103 Surface antigen J6625_07140 PF17243 POTRA domain TamA domain 1 J6625_07145 PF04357 TamB, inner membrane protein subunit of TAM complex J6625_07165 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J6625_07170 PF03707 Bacterial signalling protein N terminal repeat J6625_07170 PF00990 Diguanylate cyclase, GGDEF domain J6625_07170 PF00563 EAL domain J6625_07175 PF14718 Soluble lytic murein transglycosylase L domain J6625_07175 PF01464 Transglycosylase SLT domain J6625_07180 PF00356 Bacterial regulatory proteins, lacI family J6625_07190 PF03061 Thioesterase superfamily J6625_07200 PF03372 Endonuclease/Exonuclease/phosphatase family J6625_07205 PF01476 LysM domain J6625_07205 PF01464 Transglycosylase SLT domain J6625_07210 PF16123 Hydroxyacylglutathione hydrolase C-terminus J6625_07210 PF00753 Metallo-beta-lactamase superfamily J6625_07215 PF08241 Methyltransferase domain J6625_07220 PF00075 RNase H J6625_07225 PF00929 Exonuclease J6625_07240 PF09317 Domain of unknown function (DUF1974) J6625_07240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6625_07240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6625_07240 PF02770 Acyl-CoA dehydrogenase, middle domain J6625_07245 PF13580 SIS domain J6625_07250 PF13230 Glutamine amidotransferases class-II J6625_07260 PF01933 Uncharacterised protein family UPF0052 J6625_07270 PF00072 Response regulator receiver domain J6625_07270 PF09456 RcsC Alpha-Beta-Loop (ABL) J6625_07270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_07270 PF00512 His Kinase A (phospho-acceptor) domain J6625_07285 PF00196 Bacterial regulatory proteins, luxR family J6625_07285 PF00072 Response regulator receiver domain J6625_07290 PF00672 HAMP domain J6625_07290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_07290 PF07730 Histidine kinase J6625_07290 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J6625_07295 PF06463 Molybdenum Cofactor Synthesis C J6625_07295 PF04055 Radical SAM superfamily J6625_07310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J6625_07310 PF00384 Molybdopterin oxidoreductase J6625_07310 PF01568 Molydopterin dinucleotide binding domain J6625_07310 PF10518 TAT (twin-arginine translocation) pathway signal sequence J6625_07315 PF12800 4Fe-4S binding domain J6625_07315 PF12838 4Fe-4S dicluster domain J6625_07320 PF13237 4Fe-4S dicluster domain J6625_07320 PF12801 4Fe-4S binding domain J6625_07325 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) J6625_07330 PF03264 NapC/NirT cytochrome c family, N-terminal region J6625_07335 PF00994 Probable molybdopterin binding domain J6625_07340 PF01967 MoaC family J6625_07345 PF02597 ThiS family J6625_07350 PF02391 MoaE protein J6625_07360 PF00528 Binding-protein-dependent transport system inner membrane component J6625_07365 PF00005 ABC transporter J6625_07365 PF03459 TOBE domain J6625_07370 PF12697 Alpha/beta hydrolase family J6625_07375 PF00899 ThiF family J6625_07380 PF03454 MoeA C-terminal region (domain IV) J6625_07380 PF03453 MoeA N-terminal region (domain I and II) J6625_07380 PF00994 Probable molybdopterin binding domain J6625_07385 PF01227 GTP cyclohydrolase I J6625_07390 PF17200 Single Cache domain 2 J6625_07390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_07390 PF00672 HAMP domain J6625_07395 PF01268 Formate--tetrahydrofolate ligase J6625_07405 PF03466 LysR substrate binding domain J6625_07405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_07410 PF04264 YceI-like domain J6625_07420 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J6625_07420 PF05221 S-adenosyl-L-homocysteine hydrolase J6625_07435 PF01546 Peptidase family M20/M25/M40 J6625_07435 PF07687 Peptidase dimerisation domain J6625_07440 PF17944 Arginine decarboxylase C-terminal helical extension J6625_07440 PF17810 Arginine decarboxylase helical bundle domain J6625_07440 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J6625_07455 PF00563 EAL domain J6625_07455 PF00990 Diguanylate cyclase, GGDEF domain J6625_07455 PF03707 Bacterial signalling protein N terminal repeat J6625_07465 PF03852 DNA mismatch endonuclease Vsr J6625_07470 PF00145 C-5 cytosine-specific DNA methylase J6625_07510 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J6625_07510 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J6625_07515 PF01479 S4 domain J6625_07515 PF00849 RNA pseudouridylate synthase J6625_07520 PF07690 Major Facilitator Superfamily J6625_07530 PF03466 LysR substrate binding domain J6625_07530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_07540 PF10689 Protein of unknown function (DUF2496) J6625_07545 PF03061 Thioesterase superfamily J6625_07550 PF04391 Protein of unknown function (DUF533) J6625_07555 PF13006 Insertion element 4 transposase N-terminal J6625_07555 PF01609 Transposase DDE domain J6625_07565 PF00155 Aminotransferase class I and II J6625_07565 PF00392 Bacterial regulatory proteins, gntR family J6625_07570 PF01654 Cytochrome bd terminal oxidase subunit I J6625_07575 PF02322 Cytochrome bd terminal oxidase subunit II J6625_07585 PF07690 Major Facilitator Superfamily J6625_07590 PF00248 Aldo/keto reductase family J6625_07610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_07610 PF03466 LysR substrate binding domain J6625_07615 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J6625_07615 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J6625_07620 PF00230 Major intrinsic protein J6625_07625 PF07690 Major Facilitator Superfamily J6625_07630 PF08220 DeoR-like helix-turn-helix domain J6625_07630 PF00455 DeoR C terminal sensor domain J6625_07635 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J6625_07635 PF01266 FAD dependent oxidoreductase J6625_07640 PF03009 Glycerophosphoryl diester phosphodiesterase family J6625_07645 PF00793 DAHP synthetase I family J6625_07650 PF01817 Chorismate mutase type II J6625_07650 PF02153 Prephenate dehydrogenase J6625_07655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_07655 PF03466 LysR substrate binding domain J6625_07660 PF04219 Protein of unknown function, DUF J6625_07665 PF03974 Ecotin J6625_07685 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J6625_07685 PF00326 Prolyl oligopeptidase family J6625_07690 PF07715 TonB-dependent Receptor Plug Domain J6625_07690 PF00593 TonB dependent receptor J6625_07695 PF00884 Sulfatase J6625_07695 PF11893 Domain of unknown function (DUF3413) J6625_07700 PF07208 Protein of unknown function (DUF1414) J6625_07705 PF04245 37-kD nucleoid-associated bacterial protein J6625_07710 PF01547 Bacterial extracellular solute-binding protein J6625_07715 PF00528 Binding-protein-dependent transport system inner membrane component J6625_07715 PF14785 Maltose transport system permease protein MalF P2 domain J6625_07720 PF00528 Binding-protein-dependent transport system inner membrane component J6625_07725 PF08402 TOBE domain J6625_07725 PF00005 ABC transporter J6625_07730 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_07730 PF01610 Transposase J6625_07730 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_07735 PF03976 Polyphosphate kinase 2 (PPK2) J6625_07740 PF00561 alpha/beta hydrolase fold J6625_07750 PF01594 AI-2E family transporter J6625_07755 PF01206 Sulfurtransferase TusA J6625_07760 PF01435 Peptidase family M48 J6625_07760 PF13181 Tetratricopeptide repeat J6625_07765 PF00578 AhpC/TSA family J6625_07770 PF03960 ArsC family J6625_07785 PF04336 Acyl carrier protein phosphodiesterase J6625_07795 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6625_07800 PF01979 Amidohydrolase family J6625_07805 PF03956 Lysine exporter LysO J6625_07810 PF00005 ABC transporter J6625_07815 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6625_07820 PF00528 Binding-protein-dependent transport system inner membrane component J6625_07825 PF00528 Binding-protein-dependent transport system inner membrane component J6625_07830 PF01609 Transposase DDE domain J6625_07830 PF13006 Insertion element 4 transposase N-terminal J6625_07840 PF04055 Radical SAM superfamily J6625_07845 PF03707 Bacterial signalling protein N terminal repeat J6625_07845 PF00563 EAL domain J6625_07845 PF00990 Diguanylate cyclase, GGDEF domain J6625_07850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J6625_07850 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_07855 PF01594 AI-2E family transporter J6625_07860 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain J6625_07860 PF07678 A-macroglobulin TED domain J6625_07860 PF07703 Alpha-2-macroglobulin bait region domain J6625_07860 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain J6625_07860 PF11974 Bacterial alpha-2-macroglobulin MG3 domain J6625_07860 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain J6625_07860 PF00207 Alpha-2-macroglobulin family J6625_07860 PF01835 MG2 domain J6625_07860 PF17962 Bacterial macroglobulin domain 6 J6625_07865 PF00905 Penicillin binding protein transpeptidase domain J6625_07865 PF00912 Transglycosylase J6625_07865 PF06832 Penicillin-Binding Protein C-terminus Family J6625_07875 PF02568 Thiamine biosynthesis protein (ThiI) J6625_07875 PF02926 THUMP domain J6625_07885 PF03458 UPF0126 domain J6625_07890 PF00669 Bacterial flagellin N-terminal helical region J6625_07890 PF00700 Bacterial flagellin C-terminal helical region J6625_07895 PF00700 Bacterial flagellin C-terminal helical region J6625_07895 PF00669 Bacterial flagellin N-terminal helical region J6625_07900 PF03646 FlaG protein J6625_07905 PF07195 Flagellar hook-associated protein 2 C-terminus J6625_07905 PF02465 Flagellar hook-associated protein 2 N-terminus J6625_07905 PF07196 Flagellin hook IN motif J6625_07910 PF02561 Flagellar protein FliS J6625_07930 PF08666 SAF domain J6625_07930 PF03102 NeuB family J6625_07945 PF00202 Aminotransferase class-III J6625_07950 PF02348 Cytidylyltransferase J6625_07960 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J6625_07965 PF02719 Polysaccharide biosynthesis protein J6625_07970 PF01497 Periplasmic binding protein J6625_07980 PF01048 Phosphorylase superfamily J6625_07990 PF02535 ZIP Zinc transporter J6625_07995 PF00672 HAMP domain J6625_07995 PF12729 Four helix bundle sensory module for signal transduction J6625_07995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_08000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J6625_08005 PF00730 HhH-GPD superfamily base excision DNA repair protein J6625_08005 PF10576 Iron-sulfur binding domain of endonuclease III J6625_08005 PF00633 Helix-hairpin-helix motif J6625_08010 PF02508 Rnf-Nqr subunit, membrane protein J6625_08015 PF04205 FMN-binding domain J6625_08020 PF03116 NQR2, RnfD, RnfE family J6625_08025 PF13375 RnfC Barrel sandwich hybrid domain J6625_08025 PF12838 4Fe-4S dicluster domain J6625_08025 PF10531 SLBB domain J6625_08025 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J6625_08030 PF04060 Putative Fe-S cluster J6625_08035 PF02508 Rnf-Nqr subunit, membrane protein J6625_08040 PF12323 Helix-turn-helix domain J6625_08040 PF01385 Probable transposase J6625_08040 PF07282 Putative transposase DNA-binding domain J6625_08050 PF00892 EamA-like transporter family J6625_08060 PF08447 PAS fold J6625_08060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_08060 PF13426 PAS domain J6625_08070 PF01381 Helix-turn-helix J6625_08070 PF00717 Peptidase S24-like J6625_08140 PF08765 Mor transcription activator family J6625_08145 PF00145 C-5 cytosine-specific DNA methylase J6625_08180 PF08461 Ribonuclease R winged-helix domain J6625_08185 PF11985 Protein of unknown function (DUF3486) J6625_08190 PF03237 Terminase-like family J6625_08195 PF06074 Protein of unknown function (DUF935) J6625_08230 PF10123 Mu-like prophage I protein J6625_08235 PF10124 Mu-like prophage major head subunit gpT J6625_08310 PF07055 Enoyl reductase FAD binding domain J6625_08310 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J6625_08310 PF12241 Trans-2-enoyl-CoA reductase catalytic region J6625_08320 PF00155 Aminotransferase class I and II J6625_08330 PF00462 Glutaredoxin J6625_08335 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family J6625_08340 PF00271 Helicase conserved C-terminal domain J6625_08340 PF04851 Type III restriction enzyme, res subunit J6625_08345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6625_08345 PF00529 HlyD membrane-fusion protein of T1SS J6625_08350 PF11742 Protein of unknown function (DUF3302) J6625_08355 PF00924 Mechanosensitive ion channel J6625_08355 PF12795 Mechanosensitive ion channel porin domain J6625_08355 PF12794 Mechanosensitive ion channel inner membrane domain 1 J6625_08360 PF02554 Carbon starvation protein CstA J6625_08365 PF00072 Response regulator receiver domain J6625_08365 PF04397 LytTr DNA-binding domain J6625_08370 PF06580 Histidine kinase J6625_08370 PF07694 5TMR of 5TMR-LYT J6625_08375 PF00072 Response regulator receiver domain J6625_08380 PF00465 Iron-containing alcohol dehydrogenase J6625_08380 PF00171 Aldehyde dehydrogenase family J6625_08385 PF01914 MarC family integral membrane protein J6625_08390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6625_08395 PF00528 Binding-protein-dependent transport system inner membrane component J6625_08400 PF00528 Binding-protein-dependent transport system inner membrane component J6625_08400 PF12911 N-terminal TM domain of oligopeptide transport permease C J6625_08405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6625_08405 PF00005 ABC transporter J6625_08410 PF00005 ABC transporter J6625_08410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6625_08415 PF03741 Integral membrane protein TerC family J6625_08420 PF01168 Alanine racemase, N-terminal domain J6625_08420 PF00842 Alanine racemase, C-terminal domain J6625_08430 PF00375 Sodium:dicarboxylate symporter family J6625_08450 PF01979 Amidohydrolase family J6625_08460 PF13006 Insertion element 4 transposase N-terminal J6625_08460 PF01609 Transposase DDE domain J6625_08465 PF00672 HAMP domain J6625_08465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_08470 PF01230 HIT domain J6625_08505 PF07549 SecD/SecF GG Motif J6625_08505 PF02355 Protein export membrane protein J6625_08505 PF13721 SecD export protein N-terminal TM region J6625_08510 PF02355 Protein export membrane protein J6625_08510 PF07549 SecD/SecF GG Motif J6625_08515 PF08447 PAS fold J6625_08515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_08515 PF13426 PAS domain J6625_08525 PF05661 Protein of unknown function (DUF808) J6625_08530 PF01432 Peptidase family M3 J6625_08530 PF08439 Oligopeptidase F J6625_08535 PF01432 Peptidase family M3 J6625_08535 PF08439 Oligopeptidase F J6625_08540 PF05728 Uncharacterised protein family (UPF0227) J6625_08545 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_08550 PF01906 Putative heavy-metal-binding J6625_08555 PF00884 Sulfatase J6625_08565 PF00696 Amino acid kinase family J6625_08565 PF01842 ACT domain J6625_08570 PF00696 Amino acid kinase family J6625_08570 PF00583 Acetyltransferase (GNAT) family J6625_08575 PF01625 Peptide methionine sulfoxide reductase J6625_08600 PF03466 LysR substrate binding domain J6625_08600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_08605 PF02652 L-lactate permease J6625_08610 PF02754 Cysteine-rich domain J6625_08615 PF02589 LUD domain J6625_08615 PF13183 4Fe-4S dicluster domain J6625_08615 PF11870 Domain of unknown function (DUF3390) J6625_08620 PF02589 LUD domain J6625_08625 PF02913 FAD linked oxidases, C-terminal domain J6625_08625 PF01565 FAD binding domain J6625_08635 PF02687 FtsX-like permease family J6625_08635 PF12704 MacB-like periplasmic core domain J6625_08640 PF00005 ABC transporter J6625_08650 PF03600 Citrate transporter J6625_08660 PF07690 Major Facilitator Superfamily J6625_08680 PF01593 Flavin containing amine oxidoreductase J6625_08685 PF03239 Iron permease FTR1 family J6625_08715 PF14403 Circularly permuted ATP-grasp type 2 J6625_08715 PF04168 A predicted alpha-helical domain with a conserved ER motif. J6625_08720 PF14403 Circularly permuted ATP-grasp type 2 J6625_08735 PF00916 Sulfate permease family J6625_08735 PF01740 STAS domain J6625_08755 PF13662 Toprim domain J6625_08755 PF02132 RecR protein J6625_08760 PF00183 Hsp90 protein J6625_08760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_08765 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_08765 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_08765 PF01610 Transposase J6625_08770 PF05191 Adenylate kinase, active site lid J6625_08775 PF00762 Ferrochelatase J6625_08780 PF01124 MAPEG family J6625_08785 PF00294 pfkB family carbohydrate kinase J6625_08790 PF00672 HAMP domain J6625_08790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_08790 PF17200 Single Cache domain 2 J6625_08805 PF03707 Bacterial signalling protein N terminal repeat J6625_08805 PF00990 Diguanylate cyclase, GGDEF domain J6625_08805 PF00563 EAL domain J6625_08810 PF00483 Nucleotidyl transferase J6625_08820 PF07273 Protein of unknown function (DUF1439) J6625_08825 PF00425 chorismate binding enzyme J6625_08830 PF13193 AMP-binding enzyme C-terminal domain J6625_08830 PF00501 AMP-binding enzyme J6625_08835 PF00550 Phosphopantetheine attachment site J6625_08835 PF00857 Isochorismatase family J6625_08840 PF00550 Phosphopantetheine attachment site J6625_08840 PF00668 Condensation domain J6625_08840 PF13193 AMP-binding enzyme C-terminal domain J6625_08840 PF00501 AMP-binding enzyme J6625_08840 PF00975 Thioesterase domain J6625_08850 PF13193 AMP-binding enzyme C-terminal domain J6625_08850 PF07993 Male sterility protein J6625_08850 PF00501 AMP-binding enzyme J6625_08850 PF00550 Phosphopantetheine attachment site J6625_08850 PF00668 Condensation domain J6625_08855 PF00550 Phosphopantetheine attachment site J6625_08855 PF00668 Condensation domain J6625_08855 PF13193 AMP-binding enzyme C-terminal domain J6625_08855 PF00501 AMP-binding enzyme J6625_08855 PF00975 Thioesterase domain J6625_08860 PF01497 Periplasmic binding protein J6625_08865 PF17837 4'-phosphopantetheinyl transferase N-terminal domain J6625_08865 PF01648 4'-phosphopantetheinyl transferase superfamily J6625_08870 PF00005 ABC transporter J6625_08875 PF01032 FecCD transport family J6625_08880 PF01032 FecCD transport family J6625_08885 PF07715 TonB-dependent Receptor Plug Domain J6625_08885 PF00593 TonB dependent receptor J6625_08900 PF11143 Protein of unknown function (DUF2919) J6625_08905 PF01544 CorA-like Mg2+ transporter protein J6625_08915 PF01012 Electron transfer flavoprotein domain J6625_08920 PF00766 Electron transfer flavoprotein FAD-binding domain J6625_08920 PF01012 Electron transfer flavoprotein domain J6625_08925 PF00266 Aminotransferase class-V J6625_08930 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J6625_08935 PF00793 DAHP synthetase I family J6625_08940 PF03741 Integral membrane protein TerC family J6625_08950 PF08891 YfcL protein J6625_08955 PF00501 AMP-binding enzyme J6625_08960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J6625_08960 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region J6625_08965 PF04172 LrgB-like family J6625_08970 PF03788 LrgA family J6625_08985 PF08411 Exonuclease C-terminal J6625_08985 PF00929 Exonuclease J6625_08990 PF00149 Calcineurin-like phosphoesterase J6625_08995 PF09924 Uncharacterised conserved protein (DUF2156) J6625_08995 PF03706 Lysylphosphatidylglycerol synthase TM region J6625_09005 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6625_09010 PF00795 Carbon-nitrogen hydrolase J6625_09015 PF00155 Aminotransferase class I and II J6625_09020 PF03466 LysR substrate binding domain J6625_09020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_09025 PF02610 L-arabinose isomerase J6625_09025 PF11762 L-arabinose isomerase C-terminal domain J6625_09030 PF00596 Class II Aldolase and Adducin N-terminal domain J6625_09035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J6625_09040 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J6625_09045 PF00005 ABC transporter J6625_09050 PF02653 Branched-chain amino acid transport system / permease component J6625_09055 PF02311 AraC-like ligand binding domain J6625_09055 PF12833 Helix-turn-helix domain J6625_09060 PF00444 Ribosomal protein L36 J6625_09065 PF01197 Ribosomal protein L31 J6625_09080 PF01863 Protein of unknown function DUF45 J6625_09095 PF03606 C4-dicarboxylate anaerobic carrier J6625_09105 PF01266 FAD dependent oxidoreductase J6625_09105 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J6625_09110 PF00109 Beta-ketoacyl synthase, N-terminal domain J6625_09110 PF02801 Beta-ketoacyl synthase, C-terminal domain J6625_09125 PF00285 Citrate synthase, C-terminal domain J6625_09130 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J6625_09135 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J6625_09140 PF02910 Fumarate reductase flavoprotein C-term J6625_09140 PF00890 FAD binding domain J6625_09145 PF13085 2Fe-2S iron-sulfur cluster binding domain J6625_09150 PF16078 2-oxoglutarate dehydrogenase N-terminus J6625_09150 PF00676 Dehydrogenase E1 component J6625_09150 PF16870 2-oxoglutarate dehydrogenase C-terminal J6625_09150 PF02779 Transketolase, pyrimidine binding domain J6625_09155 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J6625_09155 PF00364 Biotin-requiring enzyme J6625_09155 PF02817 e3 binding domain J6625_09160 PF08442 ATP-grasp domain J6625_09160 PF00549 CoA-ligase J6625_09165 PF02629 CoA binding domain J6625_09165 PF00549 CoA-ligase J6625_09175 PF00665 Integrase core domain J6625_09180 PF01695 IstB-like ATP binding protein J6625_09205 PF03692 Putative zinc- or iron-chelating domain J6625_09210 PF02901 Pyruvate formate lyase-like J6625_09210 PF01228 Glycine radical J6625_09215 PF01226 Formate/nitrite transporter J6625_09220 PF18381 YcaO cyclodehydratase C-terminal domain J6625_09220 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding J6625_09230 PF00893 Small Multidrug Resistance protein J6625_09235 PF01118 Semialdehyde dehydrogenase, NAD binding domain J6625_09235 PF02774 Semialdehyde dehydrogenase, dimerisation domain J6625_09240 PF00313 'Cold-shock' DNA-binding domain J6625_09245 PF02617 ATP-dependent Clp protease adaptor protein ClpS J6625_09250 PF10431 C-terminal, D2-small domain, of ClpB protein J6625_09250 PF02861 Clp amino terminal domain, pathogenicity island component J6625_09250 PF17871 AAA lid domain J6625_09250 PF00004 ATPase family associated with various cellular activities (AAA) J6625_09250 PF07724 AAA domain (Cdc48 subfamily) J6625_09255 PF01176 Translation initiation factor 1A / IF-1 J6625_09260 PF04377 Arginine-tRNA-protein transferase, C terminus J6625_09260 PF04376 Arginine-tRNA-protein transferase, N terminus J6625_09265 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J6625_09270 PF05433 Glycine zipper 2TM domain J6625_09275 PF05230 MASE2 domain J6625_09275 PF00990 Diguanylate cyclase, GGDEF domain J6625_09280 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_09285 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J6625_09285 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J6625_09290 PF01037 Lrp/AsnC ligand binding domain J6625_09295 PF09397 Ftsk gamma domain J6625_09295 PF17854 FtsK alpha domain J6625_09295 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J6625_09295 PF01580 FtsK/SpoIIIE family J6625_09300 PF03548 Outer membrane lipoprotein carrier protein LolA J6625_09305 PF16193 AAA C-terminal domain J6625_09305 PF12002 MgsA AAA+ ATPase C terminal J6625_09305 PF00004 ATPase family associated with various cellular activities (AAA) J6625_09310 PF02403 Seryl-tRNA synthetase N-terminal domain J6625_09310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J6625_09315 PF02674 Colicin V production protein J6625_09320 PF00156 Phosphoribosyl transferase domain J6625_09325 PF00232 Glycosyl hydrolase family 1 J6625_09330 PF00367 phosphotransferase system, EIIB J6625_09330 PF02378 Phosphotransferase system, EIIC J6625_09335 PF00356 Bacterial regulatory proteins, lacI family J6625_09340 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) J6625_09345 PF00005 ABC transporter J6625_09350 PF00005 ABC transporter J6625_09350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6625_09355 PF00528 Binding-protein-dependent transport system inner membrane component J6625_09355 PF12911 N-terminal TM domain of oligopeptide transport permease C J6625_09360 PF00528 Binding-protein-dependent transport system inner membrane component J6625_09365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6625_09370 PF02954 Bacterial regulatory protein, Fis family J6625_09370 PF00158 Sigma-54 interaction domain J6625_09375 PF04012 PspA/IM30 family J6625_09380 PF06667 Phage shock protein B J6625_09390 PF04317 YcjX-like family, DUF463 J6625_09395 PF05128 Domain of unknown function (DUF697) J6625_09400 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J6625_09405 PF01329 Pterin 4 alpha carbinolamine dehydratase J6625_09410 PF18024 Helix-turn-helix domain J6625_09410 PF00158 Sigma-54 interaction domain J6625_09415 PF13689 YfiR/HmsC-like J6625_09420 PF03707 Bacterial signalling protein N terminal repeat J6625_09420 PF00990 Diguanylate cyclase, GGDEF domain J6625_09420 PF00563 EAL domain J6625_09425 PF00691 OmpA family J6625_09430 PF04055 Radical SAM superfamily J6625_09435 PF13742 OB-fold nucleic acid binding domain J6625_09435 PF02601 Exonuclease VII, large subunit J6625_09445 PF00128 Alpha amylase, catalytic domain J6625_09445 PF03423 Carbohydrate binding domain (family 25) J6625_09445 PF01373 Glycosyl hydrolase family 14 J6625_09455 PF00478 IMP dehydrogenase / GMP reductase domain J6625_09455 PF00571 CBS domain J6625_09460 PF00958 GMP synthase C terminal domain J6625_09460 PF02540 NAD synthase J6625_09460 PF00117 Glutamine amidotransferase class-I J6625_09480 PF02805 Metal binding domain of Ada J6625_09480 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J6625_09480 PF12833 Helix-turn-helix domain J6625_09480 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J6625_09500 PF01047 MarR family J6625_09510 PF05724 Thiopurine S-methyltransferase (TPMT) J6625_09515 PF00675 Insulinase (Peptidase family M16) J6625_09515 PF05193 Peptidase M16 inactive domain J6625_09515 PF16187 Middle or third domain of peptidase_M16 J6625_09520 PF00300 Histidine phosphatase superfamily (branch 1) J6625_09530 PF00892 EamA-like transporter family J6625_09535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6625_09545 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J6625_09550 PF00270 DEAD/DEAH box helicase J6625_09550 PF00271 Helicase conserved C-terminal domain J6625_09550 PF03461 TRCF domain J6625_09550 PF17757 UvrB interaction domain J6625_09550 PF02559 CarD-like/TRCF domain J6625_09560 PF02687 FtsX-like permease family J6625_09560 PF12704 MacB-like periplasmic core domain J6625_09565 PF00005 ABC transporter J6625_09570 PF12704 MacB-like periplasmic core domain J6625_09570 PF02687 FtsX-like permease family J6625_09585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6625_09585 PF05698 Bacterial trigger factor protein (TF) C-terminus J6625_09585 PF05697 Bacterial trigger factor protein (TF) J6625_09590 PF00574 Clp protease J6625_09595 PF07724 AAA domain (Cdc48 subfamily) J6625_09595 PF10431 C-terminal, D2-small domain, of ClpB protein J6625_09595 PF06689 ClpX C4-type zinc finger J6625_09600 PF00004 ATPase family associated with various cellular activities (AAA) J6625_09600 PF05362 Lon protease (S16) C-terminal proteolytic domain J6625_09600 PF02190 ATP-dependent protease La (LON) substrate-binding domain J6625_09605 PF00216 Bacterial DNA-binding protein J6625_09610 PF13145 PPIC-type PPIASE domain J6625_09615 PF00005 ABC transporter J6625_09615 PF12848 ABC transporter J6625_09620 PF00474 Sodium:solute symporter family J6625_09625 PF04341 Protein of unknown function, DUF485 J6625_09640 PF00378 Enoyl-CoA hydratase/isomerase J6625_09645 PF01235 Sodium:alanine symporter family J6625_09655 PF06167 Glucose-regulated metallo-peptidase M90 J6625_09660 PF01184 GPR1/FUN34/yaaH family J6625_09675 PF00682 HMGL-like J6625_09680 PF02785 Biotin carboxylase C-terminal domain J6625_09680 PF00289 Biotin carboxylase, N-terminal domain J6625_09680 PF00364 Biotin-requiring enzyme J6625_09680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J6625_09685 PF00378 Enoyl-CoA hydratase/isomerase J6625_09690 PF01039 Carboxyl transferase domain J6625_09695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6625_09695 PF02770 Acyl-CoA dehydrogenase, middle domain J6625_09695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6625_09700 PF00171 Aldehyde dehydrogenase family J6625_09705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6625_09705 PF02770 Acyl-CoA dehydrogenase, middle domain J6625_09705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6625_09710 PF00378 Enoyl-CoA hydratase/isomerase J6625_09715 PF00378 Enoyl-CoA hydratase/isomerase J6625_09720 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J6625_09720 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J6625_09730 PF13520 Amino acid permease J6625_09735 PF01925 Sulfite exporter TauE/SafE J6625_09755 PF02384 N-6 DNA Methylase J6625_09760 PF01420 Type I restriction modification DNA specificity domain J6625_09795 PF04002 RadC-like JAB domain J6625_09815 PF02796 Helix-turn-helix domain of resolvase J6625_09815 PF00239 Resolvase, N terminal domain J6625_09835 PF12706 Beta-lactamase superfamily domain J6625_09840 PF02653 Branched-chain amino acid transport system / permease component J6625_09845 PF02653 Branched-chain amino acid transport system / permease component J6625_09850 PF00005 ABC transporter J6625_09855 PF13407 Periplasmic binding protein domain J6625_09860 PF03466 LysR substrate binding domain J6625_09860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_09875 PF02634 FdhD/NarQ family J6625_09880 PF00384 Molybdopterin oxidoreductase J6625_09885 PF00990 Diguanylate cyclase, GGDEF domain J6625_09885 PF00072 Response regulator receiver domain J6625_09890 PF03466 LysR substrate binding domain J6625_09890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_09895 PF00232 Glycosyl hydrolase family 1 J6625_09905 PF03466 LysR substrate binding domain J6625_09905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_09915 PF00933 Glycosyl hydrolase family 3 N terminal domain J6625_09920 PF01261 Xylose isomerase-like TIM barrel J6625_09925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J6625_09925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J6625_09930 PF03466 LysR substrate binding domain J6625_09930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_09940 PF03279 Bacterial lipid A biosynthesis acyltransferase J6625_09945 PF03279 Bacterial lipid A biosynthesis acyltransferase J6625_09955 PF02678 Pirin J6625_09955 PF05726 Pirin C-terminal cupin domain J6625_09960 PF00136 DNA polymerase family B J6625_09960 PF03104 DNA polymerase family B, exonuclease domain J6625_09990 PF01554 MatE J6625_09995 PF06786 Uncharacterised protein family (UPF0253) J6625_10000 PF00677 Lumazine binding domain J6625_10015 PF13419 Haloacid dehalogenase-like hydrolase J6625_10020 PF02222 ATP-grasp domain J6625_10020 PF01370 NAD dependent epimerase/dehydratase family J6625_10025 PF00892 EamA-like transporter family J6625_10030 PF02525 Flavodoxin-like fold J6625_10060 PF07282 Putative transposase DNA-binding domain J6625_10060 PF01385 Probable transposase J6625_10060 PF12323 Helix-turn-helix domain J6625_10065 PF17783 CvfB-like winged helix domain J6625_10065 PF13509 S1 domain J6625_10075 PF04269 Protein of unknown function, DUF440 J6625_10080 PF00912 Transglycosylase J6625_10085 PF04269 Protein of unknown function, DUF440 J6625_10090 PF03776 Septum formation topological specificity factor MinE J6625_10095 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J6625_10100 PF03775 Septum formation inhibitor MinC, C-terminal domain J6625_10100 PF05209 Septum formation inhibitor MinC, N-terminal domain J6625_10105 PF05166 YcgL domain J6625_10110 PF13406 Transglycosylase SLT domain J6625_10115 PF03315 Serine dehydratase beta chain J6625_10115 PF03313 Serine dehydratase alpha chain J6625_10120 PF03313 Serine dehydratase alpha chain J6625_10120 PF03315 Serine dehydratase beta chain J6625_10125 PF06865 Pyrimidine/purine nucleoside phosphorylase J6625_10130 PF00375 Sodium:dicarboxylate symporter family J6625_10135 PF09278 MerR, DNA binding J6625_10135 PF00376 MerR family regulatory protein J6625_10140 PF02803 Thiolase, C-terminal domain J6625_10140 PF00108 Thiolase, N-terminal domain J6625_10145 PF00563 EAL domain J6625_10145 PF08668 HDOD domain J6625_10150 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J6625_10155 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J6625_10165 PF04542 Sigma-70 region 2 J6625_10165 PF08281 Sigma-70, region 4 J6625_10190 PF01882 Protein of unknown function DUF58 J6625_10195 PF17863 AAA lid domain J6625_10195 PF07726 ATPase family associated with various cellular activities (AAA) J6625_10200 PF02803 Thiolase, C-terminal domain J6625_10200 PF00108 Thiolase, N-terminal domain J6625_10205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J6625_10205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J6625_10205 PF00378 Enoyl-CoA hydratase/isomerase J6625_10215 PF07152 YaeQ protein J6625_10225 PF07690 Major Facilitator Superfamily J6625_10230 PF00005 ABC transporter J6625_10235 PF01032 FecCD transport family J6625_10250 PF01609 Transposase DDE domain J6625_10250 PF13006 Insertion element 4 transposase N-terminal J6625_10255 PF05433 Glycine zipper 2TM domain J6625_10260 PF13193 AMP-binding enzyme C-terminal domain J6625_10260 PF00501 AMP-binding enzyme J6625_10290 PF01502 Phosphoribosyl-AMP cyclohydrolase J6625_10290 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J6625_10295 PF00977 Histidine biosynthesis protein J6625_10300 PF00072 Response regulator receiver domain J6625_10300 PF01627 Hpt domain J6625_10300 PF00512 His Kinase A (phospho-acceptor) domain J6625_10300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_10305 PF08448 PAS fold J6625_10305 PF00990 Diguanylate cyclase, GGDEF domain J6625_10310 PF00072 Response regulator receiver domain J6625_10315 PF00977 Histidine biosynthesis protein J6625_10320 PF00117 Glutamine amidotransferase class-I J6625_10325 PF00475 Imidazoleglycerol-phosphate dehydratase J6625_10325 PF08645 Polynucleotide kinase 3 phosphatase J6625_10330 PF00155 Aminotransferase class I and II J6625_10335 PF00815 Histidinol dehydrogenase J6625_10340 PF01634 ATP phosphoribosyltransferase J6625_10340 PF08029 HisG, C-terminal domain J6625_10350 PF13307 Helicase C-terminal domain J6625_10350 PF04851 Type III restriction enzyme, res subunit J6625_10355 PF00814 Glycoprotease family J6625_10365 PF00561 alpha/beta hydrolase fold J6625_10370 PF00501 AMP-binding enzyme J6625_10370 PF13193 AMP-binding enzyme C-terminal domain J6625_10375 PF01612 3'-5' exonuclease J6625_10375 PF00570 HRDC domain J6625_10385 PF00892 EamA-like transporter family J6625_10390 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J6625_10390 PF02805 Metal binding domain of Ada J6625_10390 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J6625_10390 PF12833 Helix-turn-helix domain J6625_10395 PF01207 Dihydrouridine synthase (Dus) J6625_10400 PF04304 Protein of unknown function (DUF454) J6625_10405 PF00156 Phosphoribosyl transferase domain J6625_10410 PF12169 DNA polymerase III subunits gamma and tau domain III J6625_10410 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J6625_10410 PF12170 DNA polymerase III tau subunit V interacting with alpha J6625_10415 PF02575 YbaB/EbfC DNA-binding family J6625_10420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_10420 PF03466 LysR substrate binding domain J6625_10425 PF02678 Pirin J6625_10425 PF05726 Pirin C-terminal cupin domain J6625_10430 PF07670 Nucleoside recognition J6625_10435 PF00589 Phage integrase family J6625_10435 PF13495 Phage integrase, N-terminal SAM-like domain J6625_10440 PF00905 Penicillin binding protein transpeptidase domain J6625_10445 PF01909 Nucleotidyltransferase domain J6625_10445 PF13427 Domain of unknown function (DUF4111) J6625_10450 PF00905 Penicillin binding protein transpeptidase domain J6625_10460 PF00893 Small Multidrug Resistance protein J6625_10465 PF00809 Pterin binding enzyme J6625_10475 PF13610 DDE domain J6625_10480 PF00072 Response regulator receiver domain J6625_10480 PF00196 Bacterial regulatory proteins, luxR family J6625_10485 PF01743 Poly A polymerase head domain J6625_10485 PF00571 CBS domain J6625_10485 PF01368 DHH family J6625_10485 PF02272 DHHA1 domain J6625_10490 PF00270 DEAD/DEAH box helicase J6625_10490 PF11898 Domain of unknown function (DUF3418) J6625_10490 PF04408 Helicase associated domain (HA2) J6625_10490 PF00271 Helicase conserved C-terminal domain J6625_10490 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J6625_10500 PF01386 Ribosomal L25p family J6625_10515 PF00753 Metallo-beta-lactamase superfamily J6625_10525 PF00586 AIR synthase related protein, N-terminal domain J6625_10525 PF02769 AIR synthase related protein, C-terminal domain J6625_10540 PF10672 S-adenosylmethionine-dependent methyltransferase J6625_10540 PF17785 PUA-like domain J6625_10545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_10545 PF12729 Four helix bundle sensory module for signal transduction J6625_10545 PF00672 HAMP domain J6625_10550 PF00708 Acylphosphatase J6625_10560 PF09334 tRNA synthetases class I (M) J6625_10560 PF08264 Anticodon-binding domain of tRNA J6625_10560 PF01588 Putative tRNA binding domain J6625_10565 PF10609 NUBPL iron-transfer P-loop NTPase J6625_10570 PF00485 Phosphoribulokinase / Uridine kinase family J6625_10575 PF00692 dUTPase J6625_10580 PF01384 Phosphate transporter family J6625_10585 PF00575 S1 RNA binding domain J6625_10585 PF12111 Polyribonucleotide phosphorylase C terminal J6625_10585 PF10150 Ribonuclease E/G family J6625_10590 PF00849 RNA pseudouridylate synthase J6625_10590 PF01479 S4 domain J6625_10595 PF02545 Maf-like protein J6625_10605 PF02620 Large ribosomal RNA subunit accumulation protein YceD J6625_10610 PF01783 Ribosomal L32p protein family J6625_10615 PF02504 Fatty acid synthesis protein J6625_10620 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J6625_10620 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J6625_10625 PF00698 Acyl transferase domain J6625_10635 PF00550 Phosphopantetheine attachment site J6625_10640 PF02801 Beta-ketoacyl synthase, C-terminal domain J6625_10640 PF00109 Beta-ketoacyl synthase, N-terminal domain J6625_10645 PF01063 Amino-transferase class IV J6625_10650 PF02618 YceG-like family J6625_10655 PF02223 Thymidylate kinase J6625_10660 PF09115 DNA polymerase III, delta subunit, C terminal J6625_10665 PF01026 TatD related DNase J6625_10670 PF00589 Phage integrase family J6625_10705 PF00665 Integrase core domain J6625_10710 PF01695 IstB-like ATP binding protein J6625_10730 PF05840 Bacteriophage replication gene A protein (GPA) J6625_10750 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF J6625_10750 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF J6625_10750 PF01189 16S rRNA methyltransferase RsmB/F J6625_10755 PF02470 MlaD protein J6625_10760 PF04403 Paraquat-inducible protein A J6625_10770 PF07130 YebG protein J6625_10780 PF05362 Lon protease (S16) C-terminal proteolytic domain J6625_10780 PF13654 AAA domain J6625_10785 PF07977 FabA-like domain J6625_10790 PF04957 Ribosome modulation factor J6625_10800 PF00005 ABC transporter J6625_10800 PF16326 ABC transporter C-terminal domain J6625_10800 PF12848 ABC transporter J6625_10810 PF10672 S-adenosylmethionine-dependent methyltransferase J6625_10810 PF02926 THUMP domain J6625_10810 PF01170 Putative RNA methylase family UPF0020 J6625_10815 PF07126 Cell-division protein ZapC J6625_10820 PF01180 Dihydroorotate dehydrogenase J6625_10825 PF05088 Bacterial NAD-glutamate dehydrogenase J6625_10835 PF11940 Domain of unknown function (DUF3458) Ig-like fold J6625_10835 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J6625_10835 PF01433 Peptidase family M1 domain J6625_10840 PF03572 Peptidase family S41 J6625_10840 PF11818 C-terminal domain of tail specific protease (DUF3340) J6625_10840 PF00595 PDZ domain J6625_10840 PF17804 Tail specific protease N-terminal domain J6625_10845 PF17516 ProQ C-terminal domain J6625_10845 PF04352 ProQ/FINO family J6625_10850 PF13185 GAF domain J6625_10865 PF00115 Cytochrome C and Quinol oxidase polypeptide I J6625_10880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J6625_10880 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP J6625_10890 PF00403 Heavy-metal-associated domain J6625_10905 PF13545 Crp-like helix-turn-helix domain J6625_10905 PF00027 Cyclic nucleotide-binding domain J6625_10910 PF00582 Universal stress protein family J6625_10915 PF01171 PP-loop family J6625_10930 PF02798 Glutathione S-transferase, N-terminal domain J6625_10930 PF00043 Glutathione S-transferase, C-terminal domain J6625_10935 PF05025 RbsD / FucU transport protein family J6625_10940 PF00005 ABC transporter J6625_10945 PF02653 Branched-chain amino acid transport system / permease component J6625_10950 PF13407 Periplasmic binding protein domain J6625_10955 PF00294 pfkB family carbohydrate kinase J6625_10960 PF00356 Bacterial regulatory proteins, lacI family J6625_10975 PF02146 Sir2 family J6625_10990 PF00512 His Kinase A (phospho-acceptor) domain J6625_10990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_10990 PF09456 RcsC Alpha-Beta-Loop (ABL) J6625_10990 PF00072 Response regulator receiver domain J6625_10995 PF00216 Bacterial DNA-binding protein J6625_11000 PF03147 Ferredoxin-fold anticodon binding domain J6625_11000 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J6625_11000 PF01588 Putative tRNA binding domain J6625_11000 PF03483 B3/4 domain J6625_11000 PF03484 tRNA synthetase B5 domain J6625_11005 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J6625_11005 PF01409 tRNA synthetases class II core domain (F) J6625_11010 PF00453 Ribosomal protein L20 J6625_11015 PF01632 Ribosomal protein L35 J6625_11020 PF00707 Translation initiation factor IF-3, C-terminal domain J6625_11020 PF05198 Translation initiation factor IF-3, N-terminal domain J6625_11025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J6625_11025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J6625_11025 PF03129 Anticodon binding domain J6625_11025 PF02824 TGS domain J6625_11060 PF01385 Probable transposase J6625_11060 PF07282 Putative transposase DNA-binding domain J6625_11060 PF12323 Helix-turn-helix domain J6625_11080 PF00521 DNA gyrase/topoisomerase IV, subunit A J6625_11080 PF03989 DNA gyrase C-terminal domain, beta-propeller J6625_11090 PF13419 Haloacid dehalogenase-like hydrolase J6625_11095 PF00317 Ribonucleotide reductase, all-alpha domain J6625_11095 PF02867 Ribonucleotide reductase, barrel domain J6625_11095 PF03477 ATP cone domain J6625_11100 PF00268 Ribonucleotide reductase, small chain J6625_11105 PF00111 2Fe-2S iron-sulfur cluster binding domain J6625_11110 PF06725 3D domain J6625_11110 PF03562 MltA specific insert domain J6625_11115 PF06945 Protein of unknown function (DUF1289) J6625_11120 PF02378 Phosphotransferase system, EIIC J6625_11120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J6625_11125 PF00294 pfkB family carbohydrate kinase J6625_11130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J6625_11130 PF00381 PTS HPr component phosphorylation site J6625_11135 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J6625_11135 PF00356 Bacterial regulatory proteins, lacI family J6625_11140 PF03222 Tryptophan/tyrosine permease family J6625_11155 PF00271 Helicase conserved C-terminal domain J6625_11155 PF00270 DEAD/DEAH box helicase J6625_11165 PF01264 Chorismate synthase J6625_11170 PF05175 Methyltransferase small domain J6625_11175 PF01713 Smr domain J6625_11200 PF00704 Glycosyl hydrolases family 18 J6625_11200 PF08329 Chitinase A, N-terminal domain J6625_11210 PF03831 PhnA domain J6625_11210 PF08274 PhnA Zinc-Ribbon J6625_11215 PF01810 LysE type translocator J6625_11255 PF03330 Lytic transglycolase J6625_11260 PF04310 MukB N-terminal J6625_11260 PF16330 MukB hinge domain J6625_11265 PF04288 MukE-like family J6625_11270 PF17193 MukF C-terminal domain J6625_11270 PF17192 MukF middle domain J6625_11270 PF03882 MukF winged-helix domain J6625_11275 PF13847 Methyltransferase domain J6625_11280 PF02698 DUF218 domain J6625_11285 PF00121 Triosephosphate isomerase J6625_11290 PF00365 Phosphofructokinase J6625_11295 PF07687 Peptidase dimerisation domain J6625_11295 PF01546 Peptidase family M20/M25/M40 J6625_11300 PF13419 Haloacid dehalogenase-like hydrolase J6625_11305 PF00883 Cytosol aminopeptidase family, catalytic domain J6625_11305 PF02789 Cytosol aminopeptidase family, N-terminal domain J6625_11350 PF11398 Protein of unknown function (DUF2813) J6625_11365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_11365 PF03466 LysR substrate binding domain J6625_11370 PF01925 Sulfite exporter TauE/SafE J6625_11385 PF03942 DTW domain J6625_11390 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_11390 PF01610 Transposase J6625_11390 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_11395 PF01820 D-ala D-ala ligase N-terminus J6625_11395 PF07478 D-ala D-ala ligase C-terminus J6625_11405 PF00255 Glutathione peroxidase J6625_11410 PF00270 DEAD/DEAH box helicase J6625_11410 PF00271 Helicase conserved C-terminal domain J6625_11415 PF00583 Acetyltransferase (GNAT) family J6625_11440 PF13673 Acetyltransferase (GNAT) domain J6625_11445 PF03992 Antibiotic biosynthesis monooxygenase J6625_11450 PF08543 Phosphomethylpyrimidine kinase J6625_11475 PF01575 MaoC like domain J6625_11500 PF00664 ABC transporter transmembrane region J6625_11500 PF00005 ABC transporter J6625_11505 PF00005 ABC transporter J6625_11505 PF00664 ABC transporter transmembrane region J6625_11510 PF00672 HAMP domain J6625_11510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_11510 PF00512 His Kinase A (phospho-acceptor) domain J6625_11510 PF01627 Hpt domain J6625_11510 PF00072 Response regulator receiver domain J6625_11510 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J6625_11515 PF00085 Thioredoxin J6625_11520 PF00939 Sodium:sulfate symporter transmembrane region J6625_11530 PF00343 Carbohydrate phosphorylase J6625_11550 PF00425 chorismate binding enzyme J6625_11550 PF04715 Anthranilate synthase component I, N terminal region J6625_11555 PF00293 NUDIX domain J6625_11560 PF03222 Tryptophan/tyrosine permease family J6625_11565 PF00375 Sodium:dicarboxylate symporter family J6625_11570 PF00570 HRDC domain J6625_11570 PF00270 DEAD/DEAH box helicase J6625_11570 PF00271 Helicase conserved C-terminal domain J6625_11570 PF16124 RecQ zinc-binding J6625_11570 PF09382 RQC domain J6625_11575 PF08298 PrkA AAA domain J6625_11575 PF06798 PrkA serine protein kinase C-terminal domain J6625_11580 PF04285 Protein of unknown function (DUF444) J6625_11585 PF04293 SpoVR like protein J6625_11590 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_11590 PF01610 Transposase J6625_11590 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_11595 PF07840 FadR C-terminal domain J6625_11595 PF00392 Bacterial regulatory proteins, gntR family J6625_11600 PF06450 Bacterial Na+/H+ antiporter B (NhaB) J6625_11605 PF02600 Disulfide bond formation protein DsbB J6625_11610 PF09335 SNARE associated Golgi protein J6625_11620 PF02151 UvrB/uvrC motif J6625_11620 PF12344 Ultra-violet resistance protein B J6625_11620 PF17757 UvrB interaction domain J6625_11620 PF00271 Helicase conserved C-terminal domain J6625_11620 PF04851 Type III restriction enzyme, res subunit J6625_11630 PF06826 Predicted Permease Membrane Region J6625_11630 PF02080 TrkA-C domain J6625_11635 PF10145 Phage-related minor tail protein J6625_11635 PF01551 Peptidase family M23 J6625_11635 PF01464 Transglycosylase SLT domain J6625_11640 PF03401 Tripartite tricarboxylate transporter family receptor J6625_11650 PF01970 Tripartite tricarboxylate transporter TctA family J6625_11655 PF00072 Response regulator receiver domain J6625_11660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_11660 PF00989 PAS fold J6625_11660 PF17203 Single cache domain 3 J6625_11660 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J6625_11665 PF00480 ROK family J6625_11665 PF01047 MarR family J6625_11670 PF17200 Single Cache domain 2 J6625_11670 PF00672 HAMP domain J6625_11670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_11675 PF02810 SEC-C motif J6625_11680 PF04324 BFD-like [2Fe-2S] binding domain J6625_11680 PF01266 FAD dependent oxidoreductase J6625_11685 PF00890 FAD binding domain J6625_11690 PF02754 Cysteine-rich domain J6625_11690 PF13183 4Fe-4S dicluster domain J6625_11705 PF02335 Cytochrome c552 J6625_11710 PF13435 Cytochrome c554 and c-prime J6625_11710 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) J6625_11715 PF13247 4Fe-4S dicluster domain J6625_11715 PF00037 4Fe-4S binding domain J6625_11720 PF03916 Polysulphide reductase, NrfD J6625_11725 PF01578 Cytochrome C assembly protein J6625_11725 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J6625_11730 PF08534 Redoxin J6625_11735 PF03918 Cytochrome C biogenesis protein J6625_11740 PF00768 D-alanyl-D-alanine carboxypeptidase J6625_11750 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J6625_11755 PF01266 FAD dependent oxidoreductase J6625_11760 PF00571 CBS domain J6625_11760 PF01743 Poly A polymerase head domain J6625_11770 PF08267 Cobalamin-independent synthase, N-terminal domain J6625_11770 PF01717 Cobalamin-independent synthase, Catalytic domain J6625_11775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_11775 PF03466 LysR substrate binding domain J6625_11785 PF07715 TonB-dependent Receptor Plug Domain J6625_11785 PF00593 TonB dependent receptor J6625_11790 PF00990 Diguanylate cyclase, GGDEF domain J6625_11795 PF00563 EAL domain J6625_11795 PF12792 CSS motif domain associated with EAL J6625_11800 PF02311 AraC-like ligand binding domain J6625_11800 PF12833 Helix-turn-helix domain J6625_11805 PF03466 LysR substrate binding domain J6625_11805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_11810 PF13460 NAD(P)H-binding J6625_11820 PF01053 Cys/Met metabolism PLP-dependent enzyme J6625_11825 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J6625_11825 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J6625_11865 PF02646 RmuC family J6625_11910 PF13180 PDZ domain J6625_11915 PF01435 Peptidase family M48 J6625_11925 PF03707 Bacterial signalling protein N terminal repeat J6625_11925 PF00990 Diguanylate cyclase, GGDEF domain J6625_11925 PF00563 EAL domain J6625_11930 PF00085 Thioredoxin J6625_11945 PF17871 AAA lid domain J6625_11945 PF02861 Clp amino terminal domain, pathogenicity island component J6625_11945 PF10431 C-terminal, D2-small domain, of ClpB protein J6625_11945 PF00004 ATPase family associated with various cellular activities (AAA) J6625_11945 PF07724 AAA domain (Cdc48 subfamily) J6625_11950 PF00011 Hsp20/alpha crystallin family J6625_11955 PF12728 Helix-turn-helix domain J6625_12035 PF01695 IstB-like ATP binding protein J6625_12040 PF00665 Integrase core domain J6625_12050 PF13006 Insertion element 4 transposase N-terminal J6625_12050 PF01609 Transposase DDE domain J6625_12075 PF02463 RecF/RecN/SMC N terminal domain J6625_12100 PF03747 ADP-ribosylglycohydrolase J6625_12105 PF00717 Peptidase S24-like J6625_12110 PF11798 IMS family HHH motif J6625_12110 PF11799 impB/mucB/samB family C-terminal domain J6625_12110 PF00817 impB/mucB/samB family J6625_12110 PF13438 Domain of unknown function (DUF4113) J6625_12115 PF00436 Single-strand binding protein family J6625_12205 PF03783 Curli production assembly/transport component CsgG J6625_12215 PF10627 Curli assembly protein CsgE J6625_12220 PF00196 Bacterial regulatory proteins, luxR family J6625_12235 PF05598 Transposase domain (DUF772) J6625_12235 PF01609 Transposase DDE domain J6625_12255 PF00872 Transposase, Mutator family J6625_12320 PF13657 HipA N-terminal domain J6625_12320 PF07804 HipA-like C-terminal domain J6625_12330 PF00141 Peroxidase J6625_12345 PF00232 Glycosyl hydrolase family 1 J6625_12350 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J6625_12350 PF00367 phosphotransferase system, EIIB J6625_12350 PF02378 Phosphotransferase system, EIIC J6625_12355 PF01418 Helix-turn-helix domain, rpiR family J6625_12355 PF01380 SIS domain J6625_12365 PF10722 Putative bacterial sensory transduction regulator J6625_12375 PF00265 Thymidine kinase J6625_12380 PF03553 Na+/H+ antiporter family J6625_12385 PF00816 H-NS histone family J6625_12390 PF01923 Cobalamin adenosyltransferase J6625_12395 PF12843 Putative quorum-sensing-regulated virulence factor J6625_12400 PF04055 Radical SAM superfamily J6625_12405 PF06508 Queuosine biosynthesis protein QueC J6625_12420 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J6625_12425 PF18073 Rubredoxin metal binding domain J6625_12435 PF00216 Bacterial DNA-binding protein J6625_12440 PF00575 S1 RNA binding domain J6625_12445 PF02224 Cytidylate kinase J6625_12450 PF00925 GTP cyclohydrolase II J6625_12455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_12455 PF03466 LysR substrate binding domain J6625_12475 PF00881 Nitroreductase family J6625_12480 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_12480 PF01610 Transposase J6625_12480 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_12485 PF03806 AbgT putative transporter family J6625_12490 PF03707 Bacterial signalling protein N terminal repeat J6625_12490 PF00563 EAL domain J6625_12490 PF00990 Diguanylate cyclase, GGDEF domain J6625_12490 PF13188 PAS domain J6625_12500 PF03466 LysR substrate binding domain J6625_12500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_12505 PF00072 Response regulator receiver domain J6625_12505 PF00486 Transcriptional regulatory protein, C terminal J6625_12515 PF01212 Beta-eliminating lyase J6625_12530 PF00248 Aldo/keto reductase family J6625_12535 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) J6625_12545 PF03411 Penicillin-insensitive murein endopeptidase J6625_12555 PF04536 TPM domain J6625_12575 PF01618 MotA/TolQ/ExbB proton channel family J6625_12580 PF13677 Membrane MotB of proton-channel complex MotA/MotB J6625_12580 PF00691 OmpA family J6625_12585 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J6625_12590 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J6625_12595 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J6625_12595 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J6625_12605 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J6625_12605 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J6625_12610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J6625_12610 PF00384 Molybdopterin oxidoreductase J6625_12610 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J6625_12615 PF00146 NADH dehydrogenase J6625_12620 PF12838 4Fe-4S dicluster domain J6625_12625 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J6625_12630 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J6625_12635 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J6625_12635 PF00361 Proton-conducting membrane transporter J6625_12640 PF00361 Proton-conducting membrane transporter J6625_12645 PF00361 Proton-conducting membrane transporter J6625_12650 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_12650 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_12650 PF01610 Transposase J6625_12655 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J6625_12655 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J6625_12655 PF02769 AIR synthase related protein, C-terminal domain J6625_12660 PF01464 Transglycosylase SLT domain J6625_12660 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6625_12665 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_12665 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_12665 PF01610 Transposase J6625_12675 PF07191 zinc-ribbons J6625_12680 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J6625_12680 PF01926 50S ribosome-binding GTPase J6625_12685 PF13360 PQQ-like domain J6625_12690 PF09976 Tetratricopeptide repeat-like domain J6625_12695 PF03129 Anticodon binding domain J6625_12695 PF13393 Histidyl-tRNA synthetase J6625_12700 PF04551 GcpE protein J6625_12705 PF13464 Domain of unknown function (DUF4115) J6625_12715 PF04055 Radical SAM superfamily J6625_12720 PF00334 Nucleoside diphosphate kinase J6625_12725 PF00883 Cytosol aminopeptidase family, catalytic domain J6625_12725 PF12404 Peptidase J6625_12730 PF12404 Peptidase J6625_12730 PF00883 Cytosol aminopeptidase family, catalytic domain J6625_12735 PF00111 2Fe-2S iron-sulfur cluster binding domain J6625_12740 PF00012 Hsp70 protein J6625_12745 PF00226 DnaJ domain J6625_12745 PF07743 HSCB C-terminal oligomerisation domain J6625_12750 PF01521 Iron-sulphur cluster biosynthesis J6625_12755 PF01592 NifU-like N terminal domain J6625_12760 PF00266 Aminotransferase class-V J6625_12765 PF02082 Transcriptional regulator J6625_12770 PF00588 SpoU rRNA Methylase family J6625_12775 PF02036 SCP-2 sterol transfer family J6625_12780 PF01136 Peptidase family U32 J6625_12785 PF01136 Peptidase family U32 J6625_12790 PF07719 Tetratricopeptide repeat J6625_12790 PF13181 Tetratricopeptide repeat J6625_12795 PF00581 Rhodanese-like domain J6625_12800 PF07549 SecD/SecF GG Motif J6625_12800 PF02355 Protein export membrane protein J6625_12805 PF07549 SecD/SecF GG Motif J6625_12805 PF02355 Protein export membrane protein J6625_12805 PF13721 SecD export protein N-terminal TM region J6625_12810 PF02699 Preprotein translocase subunit J6625_12815 PF01702 Queuine tRNA-ribosyltransferase J6625_12820 PF02547 Queuosine biosynthesis protein J6625_12825 PF00571 CBS domain J6625_12830 PF10417 C-terminal domain of 1-Cys peroxiredoxin J6625_12830 PF00578 AhpC/TSA family J6625_12835 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_12835 PF13192 Thioredoxin domain J6625_12840 PF07690 Major Facilitator Superfamily J6625_12850 PF00391 PEP-utilising enzyme, mobile domain J6625_12850 PF00975 Thioesterase domain J6625_12850 PF00550 Phosphopantetheine attachment site J6625_12850 PF08241 Methyltransferase domain J6625_12850 PF00668 Condensation domain J6625_12850 PF00501 AMP-binding enzyme J6625_12850 PF13193 AMP-binding enzyme C-terminal domain J6625_12860 PF01609 Transposase DDE domain J6625_12860 PF13006 Insertion element 4 transposase N-terminal J6625_12865 PF02347 Glycine cleavage system P-protein J6625_12870 PF01597 Glycine cleavage H-protein J6625_12875 PF01571 Aminomethyltransferase folate-binding domain J6625_12875 PF08669 Glycine cleavage T-protein C-terminal barrel domain J6625_12880 PF01494 FAD binding domain J6625_12885 PF01494 FAD binding domain J6625_12890 PF03695 Uncharacterised protein family (UPF0149) J6625_12895 PF05164 Cell division protein ZapA J6625_12905 PF07690 Major Facilitator Superfamily J6625_12910 PF00005 ABC transporter J6625_12910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6625_12915 PF00528 Binding-protein-dependent transport system inner membrane component J6625_12915 PF12911 N-terminal TM domain of oligopeptide transport permease C J6625_12920 PF00528 Binding-protein-dependent transport system inner membrane component J6625_12930 PF00043 Glutathione S-transferase, C-terminal domain J6625_12930 PF02798 Glutathione S-transferase, N-terminal domain J6625_12935 PF02798 Glutathione S-transferase, N-terminal domain J6625_12935 PF00043 Glutathione S-transferase, C-terminal domain J6625_12945 PF00459 Inositol monophosphatase family J6625_12950 PF00691 OmpA family J6625_12950 PF18393 MotY N-terminal domain J6625_12955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_12955 PF12729 Four helix bundle sensory module for signal transduction J6625_12955 PF00672 HAMP domain J6625_12960 PF00929 Exonuclease J6625_12965 PF13726 Na+-H+ antiporter family J6625_12965 PF03553 Na+/H+ antiporter family J6625_12970 PF07690 Major Facilitator Superfamily J6625_12975 PF03466 LysR substrate binding domain J6625_12975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_12980 PF00563 EAL domain J6625_12980 PF00990 Diguanylate cyclase, GGDEF domain J6625_12980 PF08447 PAS fold J6625_12980 PF08448 PAS fold J6625_12990 PF00270 DEAD/DEAH box helicase J6625_12990 PF03880 DbpA RNA binding domain J6625_12990 PF00271 Helicase conserved C-terminal domain J6625_12995 PF03061 Thioesterase superfamily J6625_13005 PF02913 FAD linked oxidases, C-terminal domain J6625_13005 PF01565 FAD binding domain J6625_13005 PF13183 4Fe-4S dicluster domain J6625_13020 PF03471 Transporter associated domain J6625_13020 PF03741 Integral membrane protein TerC family J6625_13025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J6625_13030 PF08240 Alcohol dehydrogenase GroES-like domain J6625_13030 PF00107 Zinc-binding dehydrogenase J6625_13035 PF00962 Adenosine/AMP deaminase J6625_13040 PF13344 Haloacid dehalogenase-like hydrolase J6625_13050 PF00733 Asparagine synthase J6625_13050 PF13537 Glutamine amidotransferase domain J6625_13065 PF02798 Glutathione S-transferase, N-terminal domain J6625_13065 PF14497 Glutathione S-transferase, C-terminal domain J6625_13075 PF04209 homogentisate 1,2-dioxygenase J6625_13080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J6625_13090 PF00849 RNA pseudouridylate synthase J6625_13095 PF00563 EAL domain J6625_13095 PF00990 Diguanylate cyclase, GGDEF domain J6625_13095 PF13426 PAS domain J6625_13110 PF00285 Citrate synthase, C-terminal domain J6625_13115 PF00330 Aconitase family (aconitate hydratase) J6625_13115 PF00694 Aconitase C-terminal domain J6625_13120 PF04303 PrpF protein J6625_13130 PF07660 Secretin and TonB N terminus short domain J6625_13130 PF07715 TonB-dependent Receptor Plug Domain J6625_13130 PF00593 TonB dependent receptor J6625_13140 PF01027 Inhibitor of apoptosis-promoting Bax1 J6625_13145 PF12805 FUSC-like inner membrane protein yccS J6625_13150 PF04358 DsrC like protein J6625_13155 PF05036 Sporulation related domain J6625_13160 PF08245 Mur ligase middle domain J6625_13160 PF02875 Mur ligase family, glutamate ligase domain J6625_13165 PF01039 Carboxyl transferase domain J6625_13165 PF17848 Acetyl-coA carboxylase zinc finger domain J6625_13170 PF01416 tRNA pseudouridine synthase J6625_13180 PF01118 Semialdehyde dehydrogenase, NAD binding domain J6625_13180 PF02774 Semialdehyde dehydrogenase, dimerisation domain J6625_13185 PF11890 Domain of unknown function (DUF3410) J6625_13185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J6625_13185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J6625_13190 PF01569 PAP2 superfamily J6625_13195 PF03180 NLPA lipoprotein J6625_13220 PF00005 ABC transporter J6625_13225 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J6625_13225 PF00391 PEP-utilising enzyme, mobile domain J6625_13225 PF02896 PEP-utilising enzyme, TIM barrel domain J6625_13230 PF03618 Kinase/pyrophosphorylase J6625_13240 PF00324 Amino acid permease J6625_13280 PF00005 ABC transporter J6625_13280 PF03412 Peptidase C39 family J6625_13280 PF00664 ABC transporter transmembrane region J6625_13285 PF04055 Radical SAM superfamily J6625_13285 PF16199 Radical_SAM C-terminal domain J6625_13290 PF00310 Glutamine amidotransferases class-II J6625_13290 PF04898 Glutamate synthase central domain J6625_13290 PF01645 Conserved region in glutamate synthase J6625_13290 PF01493 GXGXG motif J6625_13295 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_13295 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J6625_13300 PF00005 ABC transporter J6625_13305 PF00528 Binding-protein-dependent transport system inner membrane component J6625_13310 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6625_13335 PF14521 Lysine-specific metallo-endopeptidase J6625_13345 PF00270 DEAD/DEAH box helicase J6625_13345 PF00271 Helicase conserved C-terminal domain J6625_13370 PF07759 Protein of unknown function (DUF1615) J6625_13375 PF00990 Diguanylate cyclase, GGDEF domain J6625_13380 PF00682 HMGL-like J6625_13380 PF08502 LeuA allosteric (dimerisation) domain J6625_13385 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_13385 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_13385 PF01610 Transposase J6625_13390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J6625_13390 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J6625_13390 PF02142 MGS-like domain J6625_13395 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J6625_13395 PF00117 Glutamine amidotransferase class-I J6625_13400 PF05173 Dihydrodipicolinate reductase, C-terminus J6625_13400 PF01113 Dihydrodipicolinate reductase, N-terminus J6625_13410 PF01812 5-formyltetrahydrofolate cyclo-ligase family J6625_13415 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J6625_13420 PF01842 ACT domain J6625_13420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J6625_13420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J6625_13425 PF01219 Prokaryotic diacylglycerol kinase J6625_13430 PF00793 DAHP synthetase I family J6625_13435 PF00005 ABC transporter J6625_13440 PF01032 FecCD transport family J6625_13455 PF00437 Type II/IV secretion system protein J6625_13465 PF07664 Ferrous iron transport protein B C terminus J6625_13465 PF02421 Ferrous iron transport protein B J6625_13465 PF17910 FeoB cytosolic helical domain J6625_13465 PF07670 Nucleoside recognition J6625_13475 PF01253 Translation initiation factor SUI1 J6625_13480 PF01169 Uncharacterized protein family UPF0016 J6625_13515 PF13185 GAF domain J6625_13515 PF00990 Diguanylate cyclase, GGDEF domain J6625_13520 PF02463 RecF/RecN/SMC N terminal domain J6625_13545 PF01406 tRNA synthetases class I (C) catalytic domain J6625_13545 PF09190 DALR domain J6625_13550 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J6625_13560 PF00149 Calcineurin-like phosphoesterase J6625_13565 PF04226 Transglycosylase associated protein J6625_13570 PF16925 Tetracyclin repressor-like, C-terminal domain J6625_13570 PF00440 Bacterial regulatory proteins, tetR family J6625_13575 PF08240 Alcohol dehydrogenase GroES-like domain J6625_13575 PF00107 Zinc-binding dehydrogenase J6625_13585 PF01979 Amidohydrolase family J6625_13590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_13590 PF03466 LysR substrate binding domain J6625_13610 PF01066 CDP-alcohol phosphatidyltransferase J6625_13615 PF08459 UvrC Helix-hairpin-helix N-terminal J6625_13615 PF02151 UvrB/uvrC motif J6625_13615 PF01541 GIY-YIG catalytic domain J6625_13620 PF00196 Bacterial regulatory proteins, luxR family J6625_13620 PF00072 Response regulator receiver domain J6625_13625 PF02348 Cytidylyltransferase J6625_13630 PF03966 Trm112p-like protein J6625_13635 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J6625_13640 PF00664 ABC transporter transmembrane region J6625_13640 PF00005 ABC transporter J6625_13645 PF03772 Competence protein J6625_13645 PF00753 Metallo-beta-lactamase superfamily J6625_13660 PF05872 Bacterial protein of unknown function (DUF853) J6625_13665 PF00155 Aminotransferase class I and II J6625_13675 PF13609 Gram-negative porin J6625_13680 PF13307 Helicase C-terminal domain J6625_13680 PF06733 DEAD_2 J6625_13690 PF00850 Histone deacetylase domain J6625_13695 PF07690 Major Facilitator Superfamily J6625_13700 PF01926 50S ribosome-binding GTPase J6625_13705 PF00245 Alkaline phosphatase J6625_13710 PF00245 Alkaline phosphatase J6625_13725 PF14760 Rnk N-terminus J6625_13725 PF01272 Transcription elongation factor, GreA/GreB, C-term J6625_13730 PF00990 Diguanylate cyclase, GGDEF domain J6625_13730 PF08448 PAS fold J6625_13735 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6625_13740 PF00528 Binding-protein-dependent transport system inner membrane component J6625_13745 PF00005 ABC transporter J6625_13755 PF04116 Fatty acid hydroxylase superfamily J6625_13760 PF13520 Amino acid permease J6625_13765 PF00809 Pterin binding enzyme J6625_13765 PF02574 Homocysteine S-methyltransferase J6625_13765 PF02607 B12 binding domain J6625_13765 PF02310 B12 binding domain J6625_13765 PF02965 Vitamin B12 dependent methionine synthase, activation domain J6625_13775 PF00571 CBS domain J6625_13775 PF03471 Transporter associated domain J6625_13775 PF01595 Cyclin M transmembrane N-terminal domain J6625_13780 PF01895 PhoU domain J6625_13785 PF00005 ABC transporter J6625_13790 PF00528 Binding-protein-dependent transport system inner membrane component J6625_13795 PF00528 Binding-protein-dependent transport system inner membrane component J6625_13800 PF14437 MafB19-like deaminase J6625_13815 PF01274 Malate synthase J6625_13820 PF00463 Isocitrate lyase family J6625_13825 PF00308 Bacterial dnaA protein J6625_13840 PF02769 AIR synthase related protein, C-terminal domain J6625_13840 PF00586 AIR synthase related protein, N-terminal domain J6625_13845 PF00551 Formyl transferase J6625_13850 PF01784 NIF3 (NGG1p interacting factor 3) J6625_13855 PF02954 Bacterial regulatory protein, Fis family J6625_13855 PF00072 Response regulator receiver domain J6625_13855 PF00158 Sigma-54 interaction domain J6625_13860 PF13188 PAS domain J6625_13860 PF00512 His Kinase A (phospho-acceptor) domain J6625_13860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_13865 PF06490 Flagellar regulatory protein FleQ J6625_13865 PF02954 Bacterial regulatory protein, Fis family J6625_13865 PF00158 Sigma-54 interaction domain J6625_13875 PF01842 ACT domain J6625_13880 PF02503 Polyphosphate kinase middle domain J6625_13880 PF13090 Polyphosphate kinase C-terminal domain 2 J6625_13880 PF17941 Polyphosphate kinase C-terminal domain 1 J6625_13880 PF13089 Polyphosphate kinase N-terminal domain J6625_13885 PF02541 Ppx/GppA phosphatase family J6625_13890 PF03448 MgtE intracellular N domain J6625_13890 PF01769 Divalent cation transporter J6625_13890 PF00571 CBS domain J6625_13900 PF07196 Flagellin hook IN motif J6625_13900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J6625_13905 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J6625_13905 PF10135 Rod binding protein J6625_13910 PF02119 Flagellar P-ring protein J6625_13915 PF02107 Flagellar L-ring protein J6625_13920 PF00460 Flagella basal body rod protein J6625_13920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J6625_13925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J6625_13925 PF00460 Flagella basal body rod protein J6625_13930 PF07559 Flagellar basal body protein FlaE J6625_13930 PF00460 Flagella basal body rod protein J6625_13930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J6625_13940 PF00460 Flagella basal body rod protein J6625_13940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J6625_13945 PF00460 Flagella basal body rod protein J6625_13950 PF01739 CheR methyltransferase, SAM binding domain J6625_13950 PF03705 CheR methyltransferase, all-alpha domain J6625_13955 PF01584 CheW-like domain J6625_13955 PF00072 Response regulator receiver domain J6625_13960 PF13144 Chaperone for flagella basal body P-ring formation J6625_13975 PF12850 Calcineurin-like phosphoesterase superfamily domain J6625_13980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6625_13990 PF01479 S4 domain J6625_13990 PF00849 RNA pseudouridylate synthase J6625_13995 PF01966 HD domain J6625_14000 PF12323 Helix-turn-helix domain J6625_14000 PF01385 Probable transposase J6625_14000 PF07282 Putative transposase DNA-binding domain J6625_14010 PF00892 EamA-like transporter family J6625_14015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6625_14040 PF00313 'Cold-shock' DNA-binding domain J6625_14045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J6625_14045 PF00364 Biotin-requiring enzyme J6625_14045 PF02817 e3 binding domain J6625_14050 PF02780 Transketolase, C-terminal domain J6625_14050 PF02779 Transketolase, pyrimidine binding domain J6625_14055 PF00676 Dehydrogenase E1 component J6625_14060 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J6625_14070 PF05472 DNA replication terminus site-binding protein (Ter protein) J6625_14075 PF00271 Helicase conserved C-terminal domain J6625_14075 PF00176 SNF2 family N-terminal domain J6625_14075 PF04434 SWIM zinc finger J6625_14080 PF04337 Protein of unknown function, DUF480 J6625_14095 PF02706 Chain length determinant protein J6625_14100 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J6625_14105 PF04321 RmlD substrate binding domain J6625_14110 PF02397 Bacterial sugar transferase J6625_14115 PF08645 Polynucleotide kinase 3 phosphatase J6625_14120 PF00483 Nucleotidyl transferase J6625_14125 PF13580 SIS domain J6625_14130 PF08544 GHMP kinases C terminal J6625_14130 PF00288 GHMP kinases N terminal domain J6625_14150 PF00132 Bacterial transferase hexapeptide (six repeats) J6625_14160 PF01370 NAD dependent epimerase/dehydratase family J6625_14165 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J6625_14170 PF00483 Nucleotidyl transferase J6625_14175 PF16363 GDP-mannose 4,6 dehydratase J6625_14180 PF00072 Response regulator receiver domain J6625_14180 PF00486 Transcriptional regulatory protein, C terminal J6625_14185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_14190 PF02685 Glucokinase J6625_14195 PF01380 SIS domain J6625_14195 PF01418 Helix-turn-helix domain, rpiR family J6625_14200 PF00224 Pyruvate kinase, barrel domain J6625_14200 PF02887 Pyruvate kinase, alpha/beta domain J6625_14210 PF00873 AcrB/AcrD/AcrF family J6625_14215 PF09317 Domain of unknown function (DUF1974) J6625_14215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6625_14215 PF02770 Acyl-CoA dehydrogenase, middle domain J6625_14215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6625_14220 PF00440 Bacterial regulatory proteins, tetR family J6625_14240 PF02321 Outer membrane efflux protein J6625_14245 PF00873 AcrB/AcrD/AcrF family J6625_14250 PF00529 HlyD membrane-fusion protein of T1SS J6625_14250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6625_14255 PF00440 Bacterial regulatory proteins, tetR family J6625_14255 PF08361 MAATS-type transcriptional repressor, C-terminal region J6625_14275 PF00849 RNA pseudouridylate synthase J6625_14275 PF01479 S4 domain J6625_14280 PF04079 Segregation and condensation complex subunit ScpB J6625_14285 PF02616 Segregation and condensation protein ScpA J6625_14290 PF01300 Telomere recombination J6625_14295 PF02811 PHP domain J6625_14300 PF00425 chorismate binding enzyme J6625_14300 PF04715 Anthranilate synthase component I, N terminal region J6625_14310 PF00117 Glutamine amidotransferase class-I J6625_14310 PF02885 Glycosyl transferase family, helical bundle domain J6625_14310 PF00591 Glycosyl transferase family, a/b domain J6625_14315 PF02885 Glycosyl transferase family, helical bundle domain J6625_14315 PF00591 Glycosyl transferase family, a/b domain J6625_14320 PF00218 Indole-3-glycerol phosphate synthase J6625_14320 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J6625_14325 PF00291 Pyridoxal-phosphate dependent enzyme J6625_14330 PF00290 Tryptophan synthase alpha chain J6625_14335 PF13592 Winged helix-turn helix J6625_14335 PF13358 DDE superfamily endonuclease J6625_14380 PF03466 LysR substrate binding domain J6625_14380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_14390 PF07237 Protein of unknown function (DUF1428) J6625_14395 PF07690 Major Facilitator Superfamily J6625_14400 PF01040 UbiA prenyltransferase family J6625_14405 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J6625_14410 PF00510 Cytochrome c oxidase subunit III J6625_14415 PF00115 Cytochrome C and Quinol oxidase polypeptide I J6625_14420 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J6625_14420 PF06481 COX Aromatic Rich Motif J6625_14425 PF02627 Carboxymuconolactone decarboxylase family J6625_14430 PF03466 LysR substrate binding domain J6625_14430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_14440 PF01156 Inosine-uridine preferring nucleoside hydrolase J6625_14450 PF01047 MarR family J6625_14465 PF00127 Copper binding proteins, plastocyanin/azurin family J6625_14470 PF02424 ApbE family J6625_14480 PF00072 Response regulator receiver domain J6625_14490 PF03372 Endonuclease/Exonuclease/phosphatase family J6625_14500 PF00529 HlyD membrane-fusion protein of T1SS J6625_14500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6625_14505 PF00873 AcrB/AcrD/AcrF family J6625_14520 PF03099 Biotin/lipoate A/B protein ligase family J6625_14520 PF10437 Bacterial lipoate protein ligase C-terminus J6625_14525 PF00563 EAL domain J6625_14525 PF00990 Diguanylate cyclase, GGDEF domain J6625_14525 PF03707 Bacterial signalling protein N terminal repeat J6625_14530 PF00873 AcrB/AcrD/AcrF family J6625_14545 PF04143 Sulphur transport J6625_14550 PF01022 Bacterial regulatory protein, arsR family J6625_14560 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_14570 PF02308 MgtC family J6625_14575 PF00356 Bacterial regulatory proteins, lacI family J6625_14575 PF13407 Periplasmic binding protein domain J6625_14580 PF08244 Glycosyl hydrolases family 32 C terminal J6625_14580 PF00251 Glycosyl hydrolases family 32 N-terminal domain J6625_14585 PF00367 phosphotransferase system, EIIB J6625_14585 PF02378 Phosphotransferase system, EIIC J6625_14590 PF00294 pfkB family carbohydrate kinase J6625_14595 PF02264 LamB porin J6625_14595 PF11471 Maltoporin periplasmic N-terminal extension J6625_14600 PF00684 DnaJ central domain J6625_14600 PF01556 DnaJ C terminal domain J6625_14600 PF00226 DnaJ domain J6625_14605 PF00012 Hsp70 protein J6625_14610 PF01025 GrpE J6625_14615 PF01513 ATP-NAD kinase J6625_14620 PF17158 Membrane-associated sensor, integral membrane domain J6625_14620 PF00990 Diguanylate cyclase, GGDEF domain J6625_14625 PF02463 RecF/RecN/SMC N terminal domain J6625_14635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6625_14640 PF12704 MacB-like periplasmic core domain J6625_14640 PF02687 FtsX-like permease family J6625_14640 PF00005 ABC transporter J6625_14645 PF02321 Outer membrane efflux protein J6625_14650 PF04954 Siderophore-interacting protein J6625_14650 PF08021 Siderophore-interacting FAD-binding domain J6625_14655 PF00793 DAHP synthetase I family J6625_14660 PF00816 H-NS histone family J6625_14665 PF03466 LysR substrate binding domain J6625_14665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_14670 PF00291 Pyridoxal-phosphate dependent enzyme J6625_14680 PF00180 Isocitrate/isopropylmalate dehydrogenase J6625_14710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J6625_14710 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_14715 PF09278 MerR, DNA binding J6625_14715 PF00376 MerR family regulatory protein J6625_14720 PF00583 Acetyltransferase (GNAT) family J6625_14725 PF00849 RNA pseudouridylate synthase J6625_14730 PF00293 NUDIX domain J6625_14740 PF04356 Protein of unknown function (DUF489) J6625_14745 PF00206 Lyase J6625_14745 PF08328 Adenylosuccinate lyase C-terminal J6625_14750 PF08007 Cupin superfamily protein J6625_14755 PF02887 Pyruvate kinase, alpha/beta domain J6625_14755 PF00224 Pyruvate kinase, barrel domain J6625_14760 PF00924 Mechanosensitive ion channel J6625_14760 PF12795 Mechanosensitive ion channel porin domain J6625_14760 PF12794 Mechanosensitive ion channel inner membrane domain 1 J6625_14765 PF01810 LysE type translocator J6625_14770 PF10282 Lactonase, 7-bladed beta-propeller J6625_14780 PF00860 Permease family J6625_14790 PF00390 Malic enzyme, N-terminal domain J6625_14790 PF03949 Malic enzyme, NAD binding domain J6625_14795 PF12804 MobA-like NTP transferase domain J6625_14800 PF03205 Molybdopterin guanine dinucleotide synthesis protein B J6625_14805 PF04632 Fusaric acid resistance protein family J6625_14820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_14820 PF13426 PAS domain J6625_14820 PF08447 PAS fold J6625_14840 PF05114 Protein of unknown function (DUF692) J6625_14850 PF02028 BCCT, betaine/carnitine/choline family transporter J6625_14860 PF01609 Transposase DDE domain J6625_14860 PF05598 Transposase domain (DUF772) J6625_14875 PF00291 Pyridoxal-phosphate dependent enzyme J6625_14875 PF14821 Threonine synthase N terminus J6625_14880 PF00288 GHMP kinases N terminal domain J6625_14880 PF08544 GHMP kinases C terminal J6625_14885 PF01842 ACT domain J6625_14885 PF00742 Homoserine dehydrogenase J6625_14885 PF00696 Amino acid kinase family J6625_14885 PF03447 Homoserine dehydrogenase, NAD binding domain J6625_14885 PF13840 ACT domain J6625_14890 PF00588 SpoU rRNA Methylase family J6625_14900 PF05598 Transposase domain (DUF772) J6625_14900 PF01609 Transposase DDE domain J6625_14910 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J6625_14925 PF03737 Aldolase/RraA J6625_14935 PF00072 Response regulator receiver domain J6625_14935 PF00486 Transcriptional regulatory protein, C terminal J6625_14950 PF00005 ABC transporter J6625_14950 PF00664 ABC transporter transmembrane region J6625_14955 PF00664 ABC transporter transmembrane region J6625_14955 PF00005 ABC transporter J6625_14975 PF01980 tRNA-methyltransferase O J6625_14975 PF18389 TrmO C-terminal domain J6625_14980 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J6625_14980 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J6625_14990 PF00004 ATPase family associated with various cellular activities (AAA) J6625_14990 PF06480 FtsH Extracellular J6625_14990 PF01434 Peptidase family M41 J6625_14990 PF17862 AAA+ lid domain J6625_14995 PF00291 Pyridoxal-phosphate dependent enzyme J6625_15000 PF00381 PTS HPr component phosphorylation site J6625_15005 PF00391 PEP-utilising enzyme, mobile domain J6625_15005 PF02896 PEP-utilising enzyme, TIM barrel domain J6625_15005 PF05524 PEP-utilising enzyme, N-terminal J6625_15010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J6625_15015 PF01292 Prokaryotic cytochrome b561 J6625_15025 PF00149 Calcineurin-like phosphoesterase J6625_15025 PF12320 Type 5 capsule protein repressor C-terminal domain J6625_15030 PF00583 Acetyltransferase (GNAT) family J6625_15035 PF04381 Putative exonuclease, RdgC J6625_15050 PF00999 Sodium/hydrogen exchanger family J6625_15050 PF02254 TrkA-N domain J6625_15055 PF00158 Sigma-54 interaction domain J6625_15055 PF00072 Response regulator receiver domain J6625_15055 PF02954 Bacterial regulatory protein, Fis family J6625_15085 PF01266 FAD dependent oxidoreductase J6625_15090 PF01381 Helix-turn-helix J6625_15090 PF07883 Cupin domain J6625_15095 PF00171 Aldehyde dehydrogenase family J6625_15100 PF00202 Aminotransferase class-III J6625_15110 PF00324 Amino acid permease J6625_15115 PF13520 Amino acid permease J6625_15125 PF02690 Na+/Pi-cotransporter J6625_15130 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J6625_15130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6625_15135 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J6625_15145 PF10725 Protein of unknown function (DUF2517) J6625_15165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_15165 PF00512 His Kinase A (phospho-acceptor) domain J6625_15165 PF09308 LuxQ, periplasmic J6625_15165 PF00072 Response regulator receiver domain J6625_15170 PF00665 Integrase core domain J6625_15175 PF01695 IstB-like ATP binding protein J6625_15180 PF13356 Arm DNA-binding domain J6625_15180 PF00589 Phage integrase family J6625_15190 PF05930 Prophage CP4-57 regulatory protein (AlpA) J6625_15205 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_15205 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_15205 PF01610 Transposase J6625_15220 PF13737 Transposase DDE domain J6625_15240 PF05973 Phage derived protein Gp49-like (DUF891) J6625_15245 PF01381 Helix-turn-helix J6625_15250 PF09588 YqaJ-like viral recombinase domain J6625_15275 PF04002 RadC-like JAB domain J6625_15310 PF00069 Protein kinase domain J6625_15310 PF16918 Protein kinase G tetratricopeptide repeat J6625_15310 PF16919 Protein kinase G rubredoxin domain J6625_15345 PF17969 L,D-transpeptidase C-terminal domain J6625_15345 PF01476 LysM domain J6625_15345 PF03734 L,D-transpeptidase catalytic domain J6625_15355 PF01575 MaoC like domain J6625_15360 PF05971 RNA methyltransferase J6625_15365 PF00877 NlpC/P60 family J6625_15375 PF01648 4'-phosphopantetheinyl transferase superfamily J6625_15380 PF00085 Thioredoxin J6625_15390 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J6625_15395 PF01842 ACT domain J6625_15395 PF00551 Formyl transferase J6625_15405 PF13091 PLD-like domain J6625_15405 PF13396 Phospholipase_D-nuclease N-terminal J6625_15420 PF01464 Transglycosylase SLT domain J6625_15420 PF10145 Phage-related minor tail protein J6625_15420 PF01551 Peptidase family M23 J6625_15430 PF02075 Crossover junction endodeoxyribonuclease RuvC J6625_15435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J6625_15475 PF11842 Domain of unknown function (DUF3362) J6625_15475 PF08497 Radical SAM N-terminal J6625_15475 PF04055 Radical SAM superfamily J6625_15480 PF00873 AcrB/AcrD/AcrF family J6625_15490 PF17158 Membrane-associated sensor, integral membrane domain J6625_15490 PF00990 Diguanylate cyclase, GGDEF domain J6625_15495 PF01734 Patatin-like phospholipase J6625_15500 PF00209 Sodium:neurotransmitter symporter family J6625_15515 PF00691 OmpA family J6625_15515 PF01389 OmpA-like transmembrane domain J6625_15520 PF01389 OmpA-like transmembrane domain J6625_15520 PF00691 OmpA family J6625_15525 PF00691 OmpA family J6625_15525 PF01389 OmpA-like transmembrane domain J6625_15530 PF00390 Malic enzyme, N-terminal domain J6625_15530 PF03949 Malic enzyme, NAD binding domain J6625_15535 PF12833 Helix-turn-helix domain J6625_15540 PF01554 MatE J6625_15545 PF10692 Protein of unknown function (DUF2498) J6625_15550 PF00072 Response regulator receiver domain J6625_15550 PF00990 Diguanylate cyclase, GGDEF domain J6625_15555 PF00860 Permease family J6625_15565 PF01235 Sodium:alanine symporter family J6625_15570 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J6625_15570 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J6625_15575 PF01699 Sodium/calcium exchanger protein J6625_15580 PF08534 Redoxin J6625_15585 PF00293 NUDIX domain J6625_15595 PF00005 ABC transporter J6625_15600 PF00528 Binding-protein-dependent transport system inner membrane component J6625_15605 PF00528 Binding-protein-dependent transport system inner membrane component J6625_15610 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6625_15625 PF00005 ABC transporter J6625_15630 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J6625_15630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6625_15650 PF03932 CutC family J6625_15655 PF00480 ROK family J6625_15665 PF01435 Peptidase family M48 J6625_15670 PF12849 PBP superfamily domain J6625_15675 PF11808 Phosphate regulon sensor protein PhoR J6625_15675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_15675 PF00512 His Kinase A (phospho-acceptor) domain J6625_15675 PF00989 PAS fold J6625_15680 PF00072 Response regulator receiver domain J6625_15680 PF00486 Transcriptional regulatory protein, C terminal J6625_15685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J6625_15690 PF07694 5TMR of 5TMR-LYT J6625_15690 PF00990 Diguanylate cyclase, GGDEF domain J6625_15695 PF01590 GAF domain J6625_15695 PF02954 Bacterial regulatory protein, Fis family J6625_15695 PF00158 Sigma-54 interaction domain J6625_15700 PF00171 Aldehyde dehydrogenase family J6625_15710 PF00892 EamA-like transporter family J6625_15720 PF00248 Aldo/keto reductase family J6625_15730 PF00072 Response regulator receiver domain J6625_15730 PF12431 Transcriptional regulator J6625_15735 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J6625_15735 PF00989 PAS fold J6625_15735 PF17203 Single cache domain 3 J6625_15735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_15740 PF01047 MarR family J6625_15745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6625_15745 PF00529 HlyD membrane-fusion protein of T1SS J6625_15765 PF01679 Proteolipid membrane potential modulator J6625_15775 PF03477 ATP cone domain J6625_15775 PF13597 Anaerobic ribonucleoside-triphosphate reductase J6625_15785 PF01653 NAD-dependent DNA ligase adenylation domain J6625_15785 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J6625_15785 PF03120 NAD-dependent DNA ligase OB-fold domain J6625_15785 PF00533 BRCA1 C Terminus (BRCT) domain J6625_15785 PF12826 Helix-hairpin-helix motif J6625_15790 PF04354 ZipA, C-terminal FtsZ-binding domain J6625_15795 PF06470 SMC proteins Flexible Hinge Domain J6625_15795 PF02463 RecF/RecN/SMC N terminal domain J6625_15805 PF03458 UPF0126 domain J6625_15815 PF05951 Bacterial protein of unknown function (DUF882) J6625_15820 PF01471 Putative peptidoglycan binding domain J6625_15820 PF03734 L,D-transpeptidase catalytic domain J6625_15835 PF00535 Glycosyl transferase family 2 J6625_15850 PF00128 Alpha amylase, catalytic domain J6625_15860 PF00196 Bacterial regulatory proteins, luxR family J6625_15860 PF00072 Response regulator receiver domain J6625_15880 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_15880 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_15880 PF01610 Transposase J6625_15890 PF00990 Diguanylate cyclase, GGDEF domain J6625_15895 PF11734 TilS substrate C-terminal domain J6625_15895 PF01171 PP-loop family J6625_15895 PF09179 TilS substrate binding domain J6625_15900 PF05649 Peptidase family M13 J6625_15900 PF01431 Peptidase family M13 J6625_15910 PF00005 ABC transporter J6625_15910 PF12848 ABC transporter J6625_15910 PF16326 ABC transporter C-terminal domain J6625_15920 PF13520 Amino acid permease J6625_15930 PF03466 LysR substrate binding domain J6625_15930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_15940 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J6625_15945 PF07733 Bacterial DNA polymerase III alpha NTPase domain J6625_15945 PF01336 OB-fold nucleic acid binding domain J6625_15945 PF02811 PHP domain J6625_15945 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J6625_15945 PF14579 Helix-hairpin-helix motif J6625_15950 PF01351 Ribonuclease HII J6625_15955 PF02684 Lipid-A-disaccharide synthetase J6625_15960 PF00132 Bacterial transferase hexapeptide (six repeats) J6625_15960 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J6625_15965 PF07977 FabA-like domain J6625_15970 PF00132 Bacterial transferase hexapeptide (six repeats) J6625_15970 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J6625_15975 PF03938 Outer membrane protein (OmpH-like) J6625_15980 PF01103 Surface antigen J6625_15980 PF07244 Surface antigen variable number repeat J6625_15985 PF17820 PDZ domain J6625_15985 PF02163 Peptidase family M50 J6625_15990 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J6625_15990 PF13288 DXP reductoisomerase C-terminal domain J6625_15990 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J6625_16000 PF01255 Putative undecaprenyl diphosphate synthase J6625_16005 PF01765 Ribosome recycling factor J6625_16010 PF00696 Amino acid kinase family J6625_16015 PF00889 Elongation factor TS J6625_16020 PF00318 Ribosomal protein S2 J6625_16025 PF00557 Metallopeptidase family M24 J6625_16030 PF01842 ACT domain J6625_16030 PF08335 GlnD PII-uridylyltransferase J6625_16030 PF01909 Nucleotidyltransferase domain J6625_16030 PF01966 HD domain J6625_16035 PF00132 Bacterial transferase hexapeptide (six repeats) J6625_16035 PF14602 Hexapeptide repeat of succinyl-transferase J6625_16035 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J6625_16040 PF11944 Protein of unknown function (DUF3461) J6625_16045 PF00367 phosphotransferase system, EIIB J6625_16045 PF02378 Phosphotransferase system, EIIC J6625_16050 PF07148 Maltose operon periplasmic protein precursor (MalM) J6625_16055 PF02264 LamB porin J6625_16065 PF00258 Flavodoxin J6625_16070 PF00849 RNA pseudouridylate synthase J6625_16075 PF04287 tRNA pseudouridine synthase C J6625_16100 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) J6625_16105 PF07348 Syd protein (SUKH-2) J6625_16110 PF14489 QueF-like protein J6625_16110 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J6625_16120 PF00990 Diguanylate cyclase, GGDEF domain J6625_16125 PF11892 Domain of unknown function (DUF3412) J6625_16125 PF03641 Possible lysine decarboxylase J6625_16125 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J6625_16130 PF01367 5'-3' exonuclease, C-terminal SAM fold J6625_16130 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J6625_16135 PF00180 Isocitrate/isopropylmalate dehydrogenase J6625_16135 PF18324 Hypothetical protein TT1725 J6625_16145 PF01728 FtsJ-like methyltransferase J6625_16145 PF18125 RlmM ferredoxin-like domain J6625_16160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_16160 PF03466 LysR substrate binding domain J6625_16165 PF00672 HAMP domain J6625_16165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_16170 PF11798 IMS family HHH motif J6625_16170 PF00817 impB/mucB/samB family J6625_16170 PF11799 impB/mucB/samB family C-terminal domain J6625_16185 PF02424 ApbE family J6625_16190 PF00970 Oxidoreductase FAD-binding domain J6625_16190 PF00111 2Fe-2S iron-sulfur cluster binding domain J6625_16190 PF00175 Oxidoreductase NAD-binding domain J6625_16195 PF02508 Rnf-Nqr subunit, membrane protein J6625_16200 PF02508 Rnf-Nqr subunit, membrane protein J6625_16205 PF04205 FMN-binding domain J6625_16210 PF03116 NQR2, RnfD, RnfE family J6625_16215 PF11973 NQRA C-terminal domain J6625_16215 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) J6625_16220 PF01722 BolA-like protein J6625_16225 PF05175 Methyltransferase small domain J6625_16235 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J6625_16245 PF07690 Major Facilitator Superfamily J6625_16250 PF03502 Nucleoside-specific channel-forming protein, Tsx J6625_16255 PF04461 Protein of unknown function (DUF520) J6625_16260 PF02558 Ketopantoate reductase PanE/ApbA J6625_16260 PF08546 Ketopantoate reductase PanE/ApbA C terminal J6625_16265 PF01965 DJ-1/PfpI family J6625_16270 PF01740 STAS domain J6625_16270 PF00916 Sulfate permease family J6625_16275 PF01610 Transposase J6625_16275 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_16275 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_16280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_16280 PF00672 HAMP domain J6625_16280 PF00512 His Kinase A (phospho-acceptor) domain J6625_16285 PF00072 Response regulator receiver domain J6625_16285 PF00486 Transcriptional regulatory protein, C terminal J6625_16290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6625_16290 PF00529 HlyD membrane-fusion protein of T1SS J6625_16295 PF00873 AcrB/AcrD/AcrF family J6625_16315 PF00356 Bacterial regulatory proteins, lacI family J6625_16320 PF13416 Bacterial extracellular solute-binding protein J6625_16325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_16325 PF00672 HAMP domain J6625_16330 PF00933 Glycosyl hydrolase family 3 N terminal domain J6625_16330 PF14310 Fibronectin type III-like domain J6625_16330 PF01915 Glycosyl hydrolase family 3 C-terminal domain J6625_16335 PF02018 Carbohydrate binding domain J6625_16335 PF02927 Cellulase N-terminal ig-like domain J6625_16335 PF00404 Dockerin type I domain J6625_16335 PF00759 Glycosyl hydrolase family 9 J6625_16340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J6625_16345 PF02378 Phosphotransferase system, EIIC J6625_16345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J6625_16350 PF00232 Glycosyl hydrolase family 1 J6625_16355 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit J6625_16360 PF00722 Glycosyl hydrolases family 16 J6625_16375 PF16363 GDP-mannose 4,6 dehydratase J6625_16380 PF00970 Oxidoreductase FAD-binding domain J6625_16380 PF00111 2Fe-2S iron-sulfur cluster binding domain J6625_16380 PF00175 Oxidoreductase NAD-binding domain J6625_16385 PF03063 Prismane/CO dehydrogenase family J6625_16390 PF00210 Ferritin-like domain J6625_16430 PF00106 short chain dehydrogenase J6625_16440 PF00875 DNA photolyase J6625_16440 PF03441 FAD binding domain of DNA photolyase J6625_16445 PF13411 MerR HTH family regulatory protein J6625_16450 PF08349 Protein of unknown function (DUF1722) J6625_16475 PF00800 Prephenate dehydratase J6625_16475 PF01817 Chorismate mutase type II J6625_16500 PF03976 Polyphosphate kinase 2 (PPK2) J6625_16505 PF07995 Glucose / Sorbosone dehydrogenase J6625_16515 PF00455 DeoR C terminal sensor domain J6625_16515 PF08220 DeoR-like helix-turn-helix domain J6625_16520 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J6625_16520 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J6625_16525 PF17042 Nucleotide-binding C-terminal domain J6625_16525 PF07005 Sugar-binding N-terminal domain J6625_16530 PF00596 Class II Aldolase and Adducin N-terminal domain J6625_16535 PF01261 Xylose isomerase-like TIM barrel J6625_16540 PF01370 NAD dependent epimerase/dehydratase family J6625_16545 PF02447 GntP family permease J6625_16555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_16560 PF03573 outer membrane porin, OprD family J6625_16565 PF00106 short chain dehydrogenase J6625_16590 PF02074 Carboxypeptidase Taq (M32) metallopeptidase J6625_16595 PF12833 Helix-turn-helix domain J6625_16595 PF02805 Metal binding domain of Ada J6625_16595 PF06029 AlkA N-terminal domain J6625_16595 PF00730 HhH-GPD superfamily base excision DNA repair protein J6625_16600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J6625_16600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J6625_16610 PF06906 Protein of unknown function (DUF1272) J6625_16620 PF12392 Collagenase J6625_16620 PF01136 Peptidase family U32 J6625_16625 PF01810 LysE type translocator J6625_16630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_16630 PF03466 LysR substrate binding domain J6625_16635 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J6625_16635 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J6625_16660 PF00563 EAL domain J6625_16660 PF01590 GAF domain J6625_16660 PF00989 PAS fold J6625_16660 PF00990 Diguanylate cyclase, GGDEF domain J6625_16670 PF01568 Molydopterin dinucleotide binding domain J6625_16670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J6625_16670 PF00384 Molybdopterin oxidoreductase J6625_16675 PF03916 Polysulphide reductase, NrfD J6625_16680 PF13247 4Fe-4S dicluster domain J6625_16685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_16685 PF00512 His Kinase A (phospho-acceptor) domain J6625_16685 PF00989 PAS fold J6625_16690 PF00196 Bacterial regulatory proteins, luxR family J6625_16690 PF00072 Response regulator receiver domain J6625_16695 PF03575 Peptidase family S51 J6625_16700 PF07690 Major Facilitator Superfamily J6625_16705 PF00529 HlyD membrane-fusion protein of T1SS J6625_16705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6625_16715 PF10415 Fumarase C C-terminus J6625_16715 PF00206 Lyase J6625_16725 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J6625_16725 PF00171 Aldehyde dehydrogenase family J6625_16725 PF01619 Proline dehydrogenase J6625_16725 PF14850 DNA-binding domain of Proline dehydrogenase J6625_16730 PF01168 Alanine racemase, N-terminal domain J6625_16730 PF00842 Alanine racemase, C-terminal domain J6625_16735 PF00772 DnaB-like helicase N terminal domain J6625_16735 PF03796 DnaB-like helicase C terminal domain J6625_16745 PF02872 5'-nucleotidase, C-terminal domain J6625_16745 PF00149 Calcineurin-like phosphoesterase J6625_16765 PF00158 Sigma-54 interaction domain J6625_16765 PF02954 Bacterial regulatory protein, Fis family J6625_16765 PF00072 Response regulator receiver domain J6625_16770 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J6625_16770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6625_16780 PF04102 SlyX J6625_16785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6625_16790 PF09526 Probable metal-binding protein (DUF2387) J6625_16800 PF00072 Response regulator receiver domain J6625_16800 PF01584 CheW-like domain J6625_16805 PF00561 alpha/beta hydrolase fold J6625_16810 PF00360 Phytochrome region J6625_16810 PF00563 EAL domain J6625_16810 PF01590 GAF domain J6625_16810 PF00990 Diguanylate cyclase, GGDEF domain J6625_16815 PF06794 Uncharacterised protein family (UPF0270) J6625_16820 PF00485 Phosphoribulokinase / Uridine kinase family J6625_16835 PF02566 OsmC-like protein J6625_16840 PF13545 Crp-like helix-turn-helix domain J6625_16840 PF00027 Cyclic nucleotide-binding domain J6625_16845 PF13847 Methyltransferase domain J6625_16850 PF08329 Chitinase A, N-terminal domain J6625_16850 PF00704 Glycosyl hydrolases family 18 J6625_16855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_16855 PF00989 PAS fold J6625_16855 PF00512 His Kinase A (phospho-acceptor) domain J6625_16860 PF12832 MFS_1 like family J6625_16865 PF00593 TonB dependent receptor J6625_16865 PF07715 TonB-dependent Receptor Plug Domain J6625_16885 PF01243 Pyridoxamine 5'-phosphate oxidase J6625_16890 PF06228 Haem utilisation ChuX/HutX J6625_16900 PF01032 FecCD transport family J6625_16905 PF00005 ABC transporter J6625_16915 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J6625_16915 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J6625_16915 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J6625_16920 PF01370 NAD dependent epimerase/dehydratase family J6625_16925 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase J6625_16935 PF00535 Glycosyl transferase family 2 J6625_16940 PF10145 Phage-related minor tail protein J6625_16940 PF01551 Peptidase family M23 J6625_16940 PF01464 Transglycosylase SLT domain J6625_16945 PF12848 ABC transporter J6625_16945 PF00005 ABC transporter J6625_16955 PF00860 Permease family J6625_16960 PF00226 DnaJ domain J6625_16960 PF05099 Tellurite resistance protein TerB J6625_16965 PF00483 Nucleotidyl transferase J6625_16970 PF01636 Phosphotransferase enzyme family J6625_16975 PF04453 LPS transport system D J6625_16975 PF03968 OstA-like protein J6625_16980 PF00639 PPIC-type PPIASE domain J6625_16980 PF09312 SurA N-terminal domain J6625_16985 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J6625_16990 PF00398 Ribosomal RNA adenine dimethylase J6625_16995 PF04379 ApaG domain J6625_17000 PF00149 Calcineurin-like phosphoesterase J6625_17010 PF00296 Luciferase-like monooxygenase J6625_17020 PF07670 Nucleoside recognition J6625_17025 PF01018 GTP1/OBG J6625_17025 PF01926 50S ribosome-binding GTPase J6625_17030 PF01016 Ribosomal L27 protein J6625_17035 PF00829 Ribosomal prokaryotic L21 protein J6625_17040 PF00348 Polyprenyl synthetase J6625_17045 PF01610 Transposase J6625_17045 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_17045 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_17050 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) J6625_17055 PF01145 SPFH domain / Band 7 family J6625_17060 PF01145 SPFH domain / Band 7 family J6625_17060 PF12221 Bacterial membrane protein N terminal J6625_17065 PF01926 50S ribosome-binding GTPase J6625_17065 PF16360 GTP-binding GTPase Middle Region J6625_17065 PF13167 GTP-binding GTPase N-terminal J6625_17070 PF17209 Hfq protein J6625_17080 PF08676 MutL C terminal dimerisation domain J6625_17080 PF01119 DNA mismatch repair protein, C-terminal domain J6625_17085 PF01520 N-acetylmuramoyl-L-alanine amidase J6625_17090 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J6625_17095 PF01256 Carbohydrate kinase J6625_17095 PF03853 YjeF-related protein N-terminus J6625_17100 PF08331 Domain of unknown function (DUF1730) J6625_17105 PF00480 ROK family J6625_17115 PF09383 NIL domain J6625_17115 PF00005 ABC transporter J6625_17120 PF00528 Binding-protein-dependent transport system inner membrane component J6625_17125 PF03180 NLPA lipoprotein J6625_17130 PF02357 Transcription termination factor nusG J6625_17135 PF08447 PAS fold J6625_17135 PF13426 PAS domain J6625_17135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_17140 PF00563 EAL domain J6625_17140 PF00990 Diguanylate cyclase, GGDEF domain J6625_17140 PF03707 Bacterial signalling protein N terminal repeat J6625_17145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_17145 PF00512 His Kinase A (phospho-acceptor) domain J6625_17145 PF09456 RcsC Alpha-Beta-Loop (ABL) J6625_17145 PF00072 Response regulator receiver domain J6625_17155 PF01966 HD domain J6625_17160 PF00072 Response regulator receiver domain J6625_17160 PF00989 PAS fold J6625_17160 PF01627 Hpt domain J6625_17160 PF18415 Histidine kinase receptor ArcB trans-membrane domain J6625_17160 PF00512 His Kinase A (phospho-acceptor) domain J6625_17160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_17180 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) J6625_17185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_17185 PF03466 LysR substrate binding domain J6625_17195 PF01259 SAICAR synthetase J6625_17200 PF06804 NlpB/DapX lipoprotein J6625_17205 PF00701 Dihydrodipicolinate synthetase family J6625_17210 PF01842 ACT domain J6625_17215 PF00578 AhpC/TSA family J6625_17220 PF03887 YfbU domain J6625_17225 PF04217 Protein of unknown function, DUF412 J6625_17230 PF00871 Acetokinase family J6625_17235 PF07085 DRTGG domain J6625_17235 PF01515 Phosphate acetyl/butaryl transferase J6625_17240 PF13006 Insertion element 4 transposase N-terminal J6625_17240 PF01609 Transposase DDE domain J6625_17245 PF10369 Small subunit of acetolactate synthase J6625_17250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J6625_17250 PF00205 Thiamine pyrophosphate enzyme, central domain J6625_17250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J6625_17265 PF01569 PAP2 superfamily J6625_17275 PF08502 LeuA allosteric (dimerisation) domain J6625_17275 PF00682 HMGL-like J6625_17280 PF00180 Isocitrate/isopropylmalate dehydrogenase J6625_17285 PF00330 Aconitase family (aconitate hydratase) J6625_17290 PF00694 Aconitase C-terminal domain J6625_17310 PF00528 Binding-protein-dependent transport system inner membrane component J6625_17315 PF00005 ABC transporter J6625_17325 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_17325 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_17325 PF01610 Transposase J6625_17330 PF02562 PhoH-like protein J6625_17330 PF13638 PIN domain J6625_17340 PF00317 Ribonucleotide reductase, all-alpha domain J6625_17340 PF08343 Ribonucleotide reductase N-terminal J6625_17340 PF02867 Ribonucleotide reductase, barrel domain J6625_17350 PF01610 Transposase J6625_17350 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_17350 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_17375 PF01521 Iron-sulphur cluster biosynthesis J6625_17385 PF00654 Voltage gated chloride channel J6625_17390 PF00202 Aminotransferase class-III J6625_17405 PF01569 PAP2 superfamily J6625_17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_17415 PF03466 LysR substrate binding domain J6625_17420 PF00893 Small Multidrug Resistance protein J6625_17425 PF00893 Small Multidrug Resistance protein J6625_17430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J6625_17435 PF14814 Bifunctional transglycosylase second domain J6625_17435 PF00912 Transglycosylase J6625_17435 PF00905 Penicillin binding protein transpeptidase domain J6625_17440 PF00270 DEAD/DEAH box helicase J6625_17440 PF04408 Helicase associated domain (HA2) J6625_17440 PF00271 Helicase conserved C-terminal domain J6625_17440 PF08482 ATP-dependent helicase C-terminal J6625_17450 PF03749 Sugar fermentation stimulation protein RE domain J6625_17450 PF17746 SfsA N-terminal OB domain J6625_17455 PF01258 Prokaryotic dksA/traR C4-type zinc finger J6625_17460 PF00749 tRNA synthetases class I (E and Q), catalytic domain J6625_17465 PF12626 Polymerase A arginine-rich C-terminus J6625_17465 PF01743 Poly A polymerase head domain J6625_17465 PF12627 Probable RNA and SrmB- binding site of polymerase A J6625_17470 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J6625_17475 PF02548 Ketopantoate hydroxymethyltransferase J6625_17480 PF02569 Pantoate-beta-alanine ligase J6625_17490 PF01061 ABC-2 type transporter J6625_17495 PF00005 ABC transporter J6625_17500 PF00156 Phosphoribosyl transferase domain J6625_17505 PF00440 Bacterial regulatory proteins, tetR family J6625_17510 PF02441 Flavoprotein J6625_17515 PF01225 Mur ligase family, catalytic domain J6625_17515 PF02875 Mur ligase family, glutamate ligase domain J6625_17515 PF08245 Mur ligase middle domain J6625_17520 PF00719 Inorganic pyrophosphatase J6625_17535 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) J6625_17550 PF00005 ABC transporter J6625_17570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_17570 PF12729 Four helix bundle sensory module for signal transduction J6625_17570 PF00672 HAMP domain J6625_17580 PF17191 RecG wedge domain J6625_17580 PF13749 Putative ATP-dependent DNA helicase recG C-terminal J6625_17580 PF00270 DEAD/DEAH box helicase J6625_17595 PF03600 Citrate transporter J6625_17595 PF02080 TrkA-C domain J6625_17600 PF00009 Elongation factor Tu GTP binding domain J6625_17605 PF01507 Phosphoadenosine phosphosulfate reductase family J6625_17610 PF10414 Sirohaem synthase dimerisation region J6625_17610 PF14824 Sirohaem biosynthesis protein central J6625_17610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J6625_17615 PF16200 C-terminal region of band_7 J6625_17615 PF01145 SPFH domain / Band 7 family J6625_17620 PF01957 NfeD-like C-terminal, partner-binding J6625_17630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J6625_17630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J6625_17635 PF07690 Major Facilitator Superfamily J6625_17640 PF01725 Ham1 family J6625_17645 PF06969 HemN C-terminal domain J6625_17645 PF04055 Radical SAM superfamily J6625_17650 PF03889 Alternative ribosome-rescue factor A J6625_17660 PF13411 MerR HTH family regulatory protein J6625_17665 PF02142 MGS-like domain J6625_17665 PF01808 AICARFT/IMPCHase bienzyme J6625_17670 PF02844 Phosphoribosylglycinamide synthetase, N domain J6625_17670 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J6625_17670 PF02843 Phosphoribosylglycinamide synthetase, C domain J6625_17685 PF00128 Alpha amylase, catalytic domain J6625_17700 PF04546 Sigma-70, non-essential region J6625_17700 PF03979 Sigma-70 factor, region 1.1 J6625_17700 PF00140 Sigma-70 factor, region 1.2 J6625_17700 PF04542 Sigma-70 region 2 J6625_17700 PF04539 Sigma-70 region 3 J6625_17700 PF04545 Sigma-70, region 4 J6625_17705 PF10410 DnaB-helicase binding domain of primase J6625_17705 PF08278 DNA primase DnaG DnaB-binding J6625_17705 PF01807 CHC2 zinc finger J6625_17705 PF08275 DNA primase catalytic core, N-terminal domain J6625_17710 PF09424 Yqey-like protein J6625_17715 PF01165 Ribosomal protein S21 J6625_17720 PF00814 Glycoprotease family J6625_17725 PF00140 Sigma-70 factor, region 1.2 J6625_17725 PF04542 Sigma-70 region 2 J6625_17725 PF04539 Sigma-70 region 3 J6625_17725 PF04545 Sigma-70, region 4 J6625_17730 PF01476 LysM domain J6625_17730 PF01551 Peptidase family M23 J6625_17735 PF09335 SNARE associated Golgi protein J6625_17745 PF01975 Survival protein SurE J6625_17750 PF01142 tRNA pseudouridine synthase D (TruD) J6625_17755 PF02542 YgbB family J6625_17760 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J6625_17765 PF04977 Septum formation initiator J6625_17770 PF03952 Enolase, N-terminal domain J6625_17770 PF00113 Enolase, C-terminal TIM barrel domain J6625_17775 PF06418 CTP synthase N-terminus J6625_17775 PF00117 Glutamine amidotransferase class-I J6625_17780 PF03819 MazG nucleotide pyrophosphohydrolase domain J6625_17785 PF13291 ACT domain J6625_17785 PF04607 Region found in RelA / SpoT proteins J6625_17785 PF02824 TGS domain J6625_17790 PF01938 TRAM domain J6625_17790 PF05958 tRNA (Uracil-5-)-methyltransferase J6625_17795 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J6625_17795 PF00072 Response regulator receiver domain J6625_17795 PF01627 Hpt domain J6625_17795 PF00512 His Kinase A (phospho-acceptor) domain J6625_17795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_17795 PF00672 HAMP domain J6625_17800 PF07308 Protein of unknown function (DUF1456) J6625_17805 PF01510 N-acetylmuramoyl-L-alanine amidase J6625_17810 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J6625_17815 PF02565 Recombination protein O C terminal J6625_17815 PF11967 Recombination protein O N terminal J6625_17820 PF07650 KH domain J6625_17820 PF01926 50S ribosome-binding GTPase J6625_17825 PF00035 Double-stranded RNA binding motif J6625_17825 PF14622 Ribonuclease-III-like J6625_17830 PF10502 Signal peptidase, peptidase S26 J6625_17835 PF06421 GTP-binding protein LepA C-terminus J6625_17835 PF00679 Elongation factor G C-terminus J6625_17835 PF00009 Elongation factor Tu GTP binding domain J6625_17835 PF03144 Elongation factor Tu domain 2 J6625_17845 PF17188 MucB/RseB C-terminal domain J6625_17845 PF03888 MucB/RseB N-terminal domain J6625_17850 PF03873 Anti sigma-E protein RseA, C-terminal domain J6625_17850 PF03872 Anti sigma-E protein RseA, N-terminal domain J6625_17855 PF04542 Sigma-70 region 2 J6625_17855 PF08281 Sigma-70, region 4 J6625_17860 PF00890 FAD binding domain J6625_17860 PF02910 Fumarate reductase flavoprotein C-term J6625_17870 PF03937 Flavinator of succinate dehydrogenase J6625_17875 PF01571 Aminomethyltransferase folate-binding domain J6625_17880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_17880 PF03466 LysR substrate binding domain J6625_17895 PF03091 CutA1 divalent ion tolerance protein J6625_17900 PF11412 Disulphide bond corrector protein DsbC J6625_17900 PF02683 Cytochrome C biogenesis protein transmembrane region J6625_17910 PF01266 FAD dependent oxidoreductase J6625_17915 PF01116 Fructose-bisphosphate aldolase class-II J6625_17920 PF00162 Phosphoglycerate kinase J6625_17925 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J6625_17925 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J6625_17930 PF00480 ROK family J6625_17935 PF01208 Uroporphyrinogen decarboxylase (URO-D) J6625_17940 PF00293 NUDIX domain J6625_17940 PF09297 NADH pyrophosphatase zinc ribbon domain J6625_17945 PF08239 Bacterial SH3 domain J6625_17950 PF00027 Cyclic nucleotide-binding domain J6625_17950 PF00520 Ion transport protein J6625_17955 PF02743 Cache domain J6625_17955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_17955 PF00672 HAMP domain J6625_17965 PF08335 GlnD PII-uridylyltransferase J6625_17965 PF03710 Glutamate-ammonia ligase adenylyltransferase J6625_17975 PF13006 Insertion element 4 transposase N-terminal J6625_17975 PF01609 Transposase DDE domain J6625_17985 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J6625_17985 PF00326 Prolyl oligopeptidase family J6625_17990 PF00291 Pyridoxal-phosphate dependent enzyme J6625_17995 PF00528 Binding-protein-dependent transport system inner membrane component J6625_18000 PF00528 Binding-protein-dependent transport system inner membrane component J6625_18005 PF00005 ABC transporter J6625_18010 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6625_18015 PF13194 Domain of unknown function (DUF4010) J6625_18020 PF14602 Hexapeptide repeat of succinyl-transferase J6625_18020 PF12464 Maltose acetyltransferase J6625_18050 PF14552 Tautomerase enzyme J6625_18060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_18060 PF03466 LysR substrate binding domain J6625_18065 PF14698 Argininosuccinate lyase C-terminal J6625_18065 PF00206 Lyase J6625_18070 PF00764 Arginosuccinate synthase J6625_18075 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J6625_18075 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J6625_18080 PF00696 Amino acid kinase family J6625_18085 PF01118 Semialdehyde dehydrogenase, NAD binding domain J6625_18085 PF02774 Semialdehyde dehydrogenase, dimerisation domain J6625_18090 PF07687 Peptidase dimerisation domain J6625_18090 PF01546 Peptidase family M20/M25/M40 J6625_18095 PF00311 Phosphoenolpyruvate carboxylase J6625_18100 PF05231 MASE1 J6625_18100 PF08447 PAS fold J6625_18100 PF08448 PAS fold J6625_18100 PF13426 PAS domain J6625_18100 PF00990 Diguanylate cyclase, GGDEF domain J6625_18100 PF00563 EAL domain J6625_18105 PF04073 Aminoacyl-tRNA editing domain J6625_18125 PF00392 Bacterial regulatory proteins, gntR family J6625_18125 PF00155 Aminotransferase class I and II J6625_18140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_18140 PF03466 LysR substrate binding domain J6625_18145 PF03788 LrgA family J6625_18150 PF04172 LrgB-like family J6625_18155 PF03447 Homoserine dehydrogenase, NAD binding domain J6625_18155 PF00742 Homoserine dehydrogenase J6625_18155 PF00696 Amino acid kinase family J6625_18160 PF01053 Cys/Met metabolism PLP-dependent enzyme J6625_18165 PF01340 Met Apo-repressor, MetJ J6625_18175 PF01588 Putative tRNA binding domain J6625_18180 PF03222 Tryptophan/tyrosine permease family J6625_18185 PF00459 Inositol monophosphatase family J6625_18190 PF00293 NUDIX domain J6625_18195 PF13419 Haloacid dehalogenase-like hydrolase J6625_18200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J6625_18205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_18205 PF03466 LysR substrate binding domain J6625_18210 PF00579 tRNA synthetases class I (W and Y) J6625_18210 PF01479 S4 domain J6625_18215 PF00196 Bacterial regulatory proteins, luxR family J6625_18220 PF01203 Type II secretion system (T2SS), protein N J6625_18225 PF04612 Type II secretion system (T2SS), protein M J6625_18230 PF05134 Type II secretion system (T2SS), protein L J6625_18230 PF12693 GspL periplasmic domain J6625_18235 PF03934 Type II secretion system (T2SS), protein K J6625_18245 PF07963 Prokaryotic N-terminal methylation motif J6625_18245 PF11612 Type II secretion system (T2SS), protein J J6625_18250 PF02501 Type II secretion system (T2SS), protein I J6625_18250 PF07963 Prokaryotic N-terminal methylation motif J6625_18255 PF12019 Type II transport protein GspH J6625_18255 PF07963 Prokaryotic N-terminal methylation motif J6625_18260 PF08334 Type II secretion system (T2SS), protein G J6625_18260 PF07963 Prokaryotic N-terminal methylation motif J6625_18265 PF00482 Type II secretion system (T2SS), protein F J6625_18270 PF00437 Type II/IV secretion system protein J6625_18275 PF03958 Bacterial type II/III secretion system short domain J6625_18275 PF00263 Bacterial type II and III secretion system protein J6625_18280 PF11356 Type II secretion system protein C J6625_18285 PF01479 S4 domain J6625_18290 PF01430 Hsp33 protein J6625_18295 PF01293 Phosphoenolpyruvate carboxykinase J6625_18300 PF00392 Bacterial regulatory proteins, gntR family J6625_18305 PF01321 Creatinase/Prolidase N-terminal domain J6625_18305 PF00557 Metallopeptidase family M24 J6625_18310 PF00583 Acetyltransferase (GNAT) family J6625_18315 PF05433 Glycine zipper 2TM domain J6625_18320 PF01928 CYTH domain J6625_18325 PF01865 Protein of unknown function DUF47 J6625_18330 PF01384 Phosphate transporter family J6625_18335 PF12627 Probable RNA and SrmB- binding site of polymerase A J6625_18335 PF01966 HD domain J6625_18335 PF01743 Poly A polymerase head domain J6625_18340 PF01471 Putative peptidoglycan binding domain J6625_18340 PF13401 AAA domain J6625_18345 PF16537 Type II secretion system protein B J6625_18350 PF10576 Iron-sulfur binding domain of endonuclease III J6625_18350 PF00633 Helix-hairpin-helix motif J6625_18350 PF00730 HhH-GPD superfamily base excision DNA repair protein J6625_18350 PF14815 NUDIX domain J6625_18355 PF04362 Bacterial Fe(2+) trafficking J6625_18360 PF01464 Transglycosylase SLT domain J6625_18360 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J6625_18370 PF00657 GDSL-like Lipase/Acylhydrolase J6625_18375 PF00691 OmpA family J6625_18375 PF01389 OmpA-like transmembrane domain J6625_18380 PF03886 ABC-type transport auxiliary lipoprotein component J6625_18385 PF02470 MlaD protein J6625_18390 PF04403 Paraquat-inducible protein A J6625_18395 PF17209 Hfq protein J6625_18400 PF13419 Haloacid dehalogenase-like hydrolase J6625_18405 PF01590 GAF domain J6625_18405 PF00563 EAL domain J6625_18405 PF00360 Phytochrome region J6625_18405 PF00990 Diguanylate cyclase, GGDEF domain J6625_18410 PF00701 Dihydrodipicolinate synthetase family J6625_18415 PF05175 Methyltransferase small domain J6625_18415 PF08468 Methyltransferase small domain N-terminal J6625_18420 PF00483 Nucleotidyl transferase J6625_18425 PF00534 Glycosyl transferases group 1 J6625_18425 PF08323 Starch synthase catalytic domain J6625_18465 PF03553 Na+/H+ antiporter family J6625_18470 PF03466 LysR substrate binding domain J6625_18470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_18475 PF13416 Bacterial extracellular solute-binding protein J6625_18480 PF08402 TOBE domain J6625_18480 PF00005 ABC transporter J6625_18485 PF00528 Binding-protein-dependent transport system inner membrane component J6625_18490 PF00528 Binding-protein-dependent transport system inner membrane component J6625_18495 PF00171 Aldehyde dehydrogenase family J6625_18500 PF01040 UbiA prenyltransferase family J6625_18525 PF00510 Cytochrome c oxidase subunit III J6625_18530 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J6625_18535 PF00115 Cytochrome C and Quinol oxidase polypeptide I J6625_18540 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J6625_18540 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J6625_18545 PF13718 GNAT acetyltransferase 2 J6625_18545 PF08351 Domain of unknown function (DUF1726) J6625_18545 PF17176 tRNA-binding domain J6625_18545 PF05127 Helicase J6625_18560 PF00210 Ferritin-like domain J6625_18565 PF02142 MGS-like domain J6625_18580 PF17763 Glutaminase/Asparaginase C-terminal domain J6625_18580 PF00710 Asparaginase, N-terminal J6625_18595 PF00356 Bacterial regulatory proteins, lacI family J6625_18600 PF00367 phosphotransferase system, EIIB J6625_18600 PF02378 Phosphotransferase system, EIIC J6625_18605 PF11941 Domain of unknown function (DUF3459) J6625_18605 PF00128 Alpha amylase, catalytic domain J6625_18610 PF14602 Hexapeptide repeat of succinyl-transferase J6625_18610 PF12464 Maltose acetyltransferase J6625_18615 PF01037 Lrp/AsnC ligand binding domain J6625_18620 PF00892 EamA-like transporter family J6625_18645 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_18645 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_18645 PF01610 Transposase J6625_18650 PF04222 Protein of unknown function (DUF416) J6625_18655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J6625_18660 PF01551 Peptidase family M23 J6625_18660 PF01476 LysM domain J6625_18660 PF08525 Opacity-associated protein A N-terminal motif J6625_18680 PF01297 Zinc-uptake complex component A periplasmic J6625_18685 PF00005 ABC transporter J6625_18690 PF00950 ABC 3 transport family J6625_18695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_18695 PF03466 LysR substrate binding domain J6625_18705 PF03167 Uracil DNA glycosylase superfamily J6625_18710 PF00892 EamA-like transporter family J6625_18715 PF01541 GIY-YIG catalytic domain J6625_18730 PF04012 PspA/IM30 family J6625_18735 PF01553 Acyltransferase J6625_18755 PF00578 AhpC/TSA family J6625_18765 PF00684 DnaJ central domain J6625_18765 PF01556 DnaJ C terminal domain J6625_18765 PF00226 DnaJ domain J6625_18820 PF03989 DNA gyrase C-terminal domain, beta-propeller J6625_18820 PF00521 DNA gyrase/topoisomerase IV, subunit A J6625_18825 PF00204 DNA gyrase B J6625_18825 PF00986 DNA gyrase B subunit, carboxyl terminus J6625_18825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_18825 PF01751 Toprim domain J6625_18830 PF04632 Fusaric acid resistance protein family J6625_18835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6625_18835 PF00529 HlyD membrane-fusion protein of T1SS J6625_18840 PF07869 Protein of unknown function (DUF1656) J6625_18850 PF00293 NUDIX domain J6625_18855 PF05728 Uncharacterised protein family (UPF0227) J6625_18860 PF00149 Calcineurin-like phosphoesterase J6625_18865 PF06853 Protein of unknown function (DUF1249) J6625_18870 PF00293 NUDIX domain J6625_18875 PF02321 Outer membrane efflux protein J6625_18880 PF00294 pfkB family carbohydrate kinase J6625_18880 PF01467 Cytidylyltransferase-like J6625_18885 PF03279 Bacterial lipid A biosynthesis acyltransferase J6625_18890 PF02872 5'-nucleotidase, C-terminal domain J6625_18890 PF00149 Calcineurin-like phosphoesterase J6625_18895 PF01810 LysE type translocator J6625_18900 PF03472 Autoinducer binding domain J6625_18900 PF00196 Bacterial regulatory proteins, luxR family J6625_18905 PF00765 Autoinducer synthase J6625_18910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_18910 PF03466 LysR substrate binding domain J6625_18915 PF17876 Cold shock domain J6625_18915 PF08206 Ribonuclease B OB domain J6625_18915 PF00773 RNB domain J6625_18925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J6625_18925 PF02378 Phosphotransferase system, EIIC J6625_18925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J6625_18930 PF08125 Mannitol dehydrogenase C-terminal domain J6625_18930 PF01232 Mannitol dehydrogenase Rossmann domain J6625_18935 PF05068 Mannitol repressor J6625_18940 PF02080 TrkA-C domain J6625_18940 PF00999 Sodium/hydrogen exchanger family J6625_18940 PF03471 Transporter associated domain J6625_18955 PF01544 CorA-like Mg2+ transporter protein J6625_18960 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J6625_18975 PF07662 Na+ dependent nucleoside transporter C-terminus J6625_18975 PF01773 Na+ dependent nucleoside transporter N-terminus J6625_18975 PF07670 Nucleoside recognition J6625_18980 PF03880 DbpA RNA binding domain J6625_18980 PF00270 DEAD/DEAH box helicase J6625_18980 PF00271 Helicase conserved C-terminal domain J6625_19000 PF01040 UbiA prenyltransferase family J6625_19005 PF00425 chorismate binding enzyme J6625_19010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J6625_19010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J6625_19010 PF16582 Middle domain of thiamine pyrophosphate J6625_19015 PF12697 Alpha/beta hydrolase family J6625_19020 PF00378 Enoyl-CoA hydratase/isomerase J6625_19025 PF13378 Enolase C-terminal domain-like J6625_19030 PF00501 AMP-binding enzyme J6625_19030 PF13193 AMP-binding enzyme C-terminal domain J6625_19035 PF01752 Collagenase J6625_19035 PF08453 Peptidase family M9 N-terminal J6625_19040 PF02698 DUF218 domain J6625_19045 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J6625_19045 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J6625_19055 PF00561 alpha/beta hydrolase fold J6625_19075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6625_19075 PF12793 Sugar transport-related sRNA regulator N-term J6625_19085 PF01053 Cys/Met metabolism PLP-dependent enzyme J6625_19095 PF00465 Iron-containing alcohol dehydrogenase J6625_19110 PF00106 short chain dehydrogenase J6625_19130 PF02308 MgtC family J6625_19135 PF00128 Alpha amylase, catalytic domain J6625_19135 PF02903 Alpha amylase, N-terminal ig-like domain J6625_19135 PF16657 Maltogenic Amylase, C-terminal domain J6625_19145 PF00884 Sulfatase J6625_19150 PF01037 Lrp/AsnC ligand binding domain J6625_19160 PF04204 Homoserine O-succinyltransferase J6625_19170 PF02464 Competence-damaged protein J6625_19170 PF00994 Probable molybdopterin binding domain J6625_19175 PF04307 LexA-binding, inner membrane-associated putative hydrolase J6625_19195 PF07722 Peptidase C26 J6625_19205 PF13419 Haloacid dehalogenase-like hydrolase J6625_19210 PF00589 Phage integrase family J6625_19210 PF02899 Phage integrase, N-terminal SAM-like domain J6625_19220 PF01678 Diaminopimelate epimerase J6625_19225 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J6625_19225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J6625_19235 PF01491 Frataxin-like domain J6625_19240 PF02230 Phospholipase/Carboxylesterase J6625_19245 PF12633 Adenylate cyclase NT domain J6625_19245 PF01295 Adenylate cyclase, class-I J6625_19250 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J6625_19250 PF03900 Porphobilinogen deaminase, C-terminal domain J6625_19255 PF02602 Uroporphyrinogen-III synthase HemD J6625_19260 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase J6625_19265 PF07719 Tetratricopeptide repeat J6625_19265 PF07219 HemY protein N-terminus J6625_19270 PF01523 Putative modulator of DNA gyrase J6625_19275 PF04751 Protein of unknown function (DUF615) J6625_19285 PF04363 Protein of unknown function (DUF496) J6625_19320 PF07883 Cupin domain J6625_19320 PF01381 Helix-turn-helix J6625_19325 PF03594 Benzoate membrane transport protein J6625_19335 PF02219 Methylenetetrahydrofolate reductase J6625_19350 PF00672 HAMP domain J6625_19350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_19350 PF12729 Four helix bundle sensory module for signal transduction J6625_19355 PF03922 OmpW family J6625_19360 PF17760 UvrA interaction domain J6625_19360 PF17755 UvrA DNA-binding domain J6625_19360 PF00005 ABC transporter J6625_19365 PF00196 Bacterial regulatory proteins, luxR family J6625_19370 PF00436 Single-strand binding protein family J6625_19385 PF00313 'Cold-shock' DNA-binding domain J6625_19390 PF00672 HAMP domain J6625_19390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_19390 PF00512 His Kinase A (phospho-acceptor) domain J6625_19395 PF00486 Transcriptional regulatory protein, C terminal J6625_19395 PF00072 Response regulator receiver domain J6625_19405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_19405 PF00672 HAMP domain J6625_19415 PF00990 Diguanylate cyclase, GGDEF domain J6625_19415 PF08448 PAS fold J6625_19420 PF00543 Nitrogen regulatory protein P-II J6625_19425 PF00909 Ammonium Transporter Family J6625_19435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J6625_19445 PF17092 Penicillin-binding protein OB-like domain J6625_19445 PF00912 Transglycosylase J6625_19445 PF00905 Penicillin binding protein transpeptidase domain J6625_19450 PF13538 UvrD-like helicase C-terminal domain J6625_19455 PF00580 UvrD/REP helicase N-terminal domain J6625_19455 PF13361 UvrD-like helicase C-terminal domain J6625_19455 PF12705 PD-(D/E)XK nuclease superfamily J6625_19460 PF17946 RecC C-terminal domain J6625_19465 PF07681 DoxX J6625_19470 PF17954 Quercetinase C-terminal cupin domain J6625_19470 PF02678 Pirin J6625_19480 PF03466 LysR substrate binding domain J6625_19480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_19490 PF00392 Bacterial regulatory proteins, gntR family J6625_19490 PF07702 UTRA domain J6625_19505 PF00528 Binding-protein-dependent transport system inner membrane component J6625_19515 PF00005 ABC transporter J6625_19515 PF08402 TOBE domain J6625_19525 PF00990 Diguanylate cyclase, GGDEF domain J6625_19525 PF00072 Response regulator receiver domain J6625_19540 PF01610 Transposase J6625_19540 PF13542 Helix-turn-helix domain of transposase family ISL3 J6625_19540 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J6625_19550 PF00583 Acetyltransferase (GNAT) family J6625_19555 PF00199 Catalase J6625_19555 PF06628 Catalase-related immune-responsive J6625_19575 PF00293 NUDIX domain J6625_19580 PF01594 AI-2E family transporter J6625_19585 PF00106 short chain dehydrogenase J6625_19590 PF04371 Porphyromonas-type peptidyl-arginine deiminase J6625_19595 PF13416 Bacterial extracellular solute-binding protein J6625_19600 PF00795 Carbon-nitrogen hydrolase J6625_19605 PF04371 Porphyromonas-type peptidyl-arginine deiminase J6625_19610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_19610 PF03466 LysR substrate binding domain J6625_19615 PF00158 Sigma-54 interaction domain J6625_19615 PF02954 Bacterial regulatory protein, Fis family J6625_19615 PF00989 PAS fold J6625_19620 PF00381 PTS HPr component phosphorylation site J6625_19620 PF03610 PTS system fructose IIA component J6625_19620 PF05524 PEP-utilising enzyme, N-terminal J6625_19620 PF00391 PEP-utilising enzyme, mobile domain J6625_19625 PF02734 DAK2 domain J6625_19630 PF02733 Dak1 domain J6625_19635 PF00860 Permease family J6625_19640 PF03079 ARD/ARD' family J6625_19680 PF00009 Elongation factor Tu GTP binding domain J6625_19680 PF03144 Elongation factor Tu domain 2 J6625_19680 PF03143 Elongation factor Tu C-terminal domain J6625_19685 PF03144 Elongation factor Tu domain 2 J6625_19685 PF00009 Elongation factor Tu GTP binding domain J6625_19685 PF03764 Elongation factor G, domain IV J6625_19685 PF14492 Elongation Factor G, domain II J6625_19685 PF00679 Elongation factor G C-terminus J6625_19690 PF00177 Ribosomal protein S7p/S5e J6625_19695 PF00164 Ribosomal protein S12/S23 J6625_19700 PF04077 DsrH like protein J6625_19705 PF02635 DsrE/DsrF-like family J6625_19710 PF02635 DsrE/DsrF-like family J6625_19715 PF01042 Endoribonuclease L-PSP J6625_19720 PF08348 YheO-like PAS domain J6625_19720 PF13309 HTH domain J6625_19725 PF00623 RNA polymerase Rpb1, domain 2 J6625_19725 PF04983 RNA polymerase Rpb1, domain 3 J6625_19725 PF05000 RNA polymerase Rpb1, domain 4 J6625_19725 PF04998 RNA polymerase Rpb1, domain 5 J6625_19725 PF04997 RNA polymerase Rpb1, domain 1 J6625_19730 PF04563 RNA polymerase beta subunit J6625_19730 PF10385 RNA polymerase beta subunit external 1 domain J6625_19730 PF00562 RNA polymerase Rpb2, domain 6 J6625_19730 PF04560 RNA polymerase Rpb2, domain 7 J6625_19730 PF04561 RNA polymerase Rpb2, domain 2 J6625_19730 PF04565 RNA polymerase Rpb2, domain 3 J6625_19735 PF16320 Ribosomal protein L7/L12 dimerisation domain J6625_19735 PF00542 Ribosomal protein L7/L12 C-terminal domain J6625_19740 PF00466 Ribosomal protein L10 J6625_19745 PF00687 Ribosomal protein L1p/L10e family J6625_19750 PF03946 Ribosomal protein L11, N-terminal domain J6625_19750 PF00298 Ribosomal protein L11, RNA binding domain J6625_19755 PF02357 Transcription termination factor nusG J6625_19755 PF00467 KOW motif J6625_19760 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J6625_19770 PF03144 Elongation factor Tu domain 2 J6625_19770 PF00009 Elongation factor Tu GTP binding domain J6625_19770 PF03143 Elongation factor Tu C-terminal domain J6625_19785 PF00485 Phosphoribulokinase / Uridine kinase family J6625_19790 PF08279 HTH domain J6625_19790 PF03099 Biotin/lipoate A/B protein ligase family J6625_19790 PF02237 Biotin protein ligase C terminal domain J6625_19795 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J6625_19795 PF01565 FAD binding domain J6625_19800 PF02254 TrkA-N domain J6625_19800 PF02080 TrkA-C domain J6625_19805 PF02386 Cation transport protein J6625_19810 PF01751 Toprim domain J6625_19810 PF01131 DNA topoisomerase J6625_19815 PF03264 NapC/NirT cytochrome c family, N-terminal region J6625_19820 PF00384 Molybdopterin oxidoreductase J6625_19820 PF18364 Molybdopterin oxidoreductase N-terminal domain J6625_19820 PF01568 Molydopterin dinucleotide binding domain J6625_19830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_19835 PF00072 Response regulator receiver domain J6625_19835 PF00486 Transcriptional regulatory protein, C terminal J6625_19850 PF01794 Ferric reductase like transmembrane component J6625_19855 PF00174 Oxidoreductase molybdopterin binding domain J6625_19860 PF06496 Protein of unknown function (DUF1097) J6625_19865 PF00072 Response regulator receiver domain J6625_19865 PF00158 Sigma-54 interaction domain J6625_19875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_19875 PF00512 His Kinase A (phospho-acceptor) domain J6625_19895 PF03061 Thioesterase superfamily J6625_19895 PF00571 CBS domain J6625_19895 PF07085 DRTGG domain J6625_19895 PF00392 Bacterial regulatory proteins, gntR family J6625_19905 PF01037 Lrp/AsnC ligand binding domain J6625_19910 PF03590 Aspartate-ammonia ligase J6625_19920 PF00004 ATPase family associated with various cellular activities (AAA) J6625_19920 PF07724 AAA domain (Cdc48 subfamily) J6625_19920 PF17871 AAA lid domain J6625_19920 PF02861 Clp amino terminal domain, pathogenicity island component J6625_19920 PF10431 C-terminal, D2-small domain, of ClpB protein J6625_19925 PF02578 Multi-copper polyphenol oxidoreductase laccase J6625_19930 PF00849 RNA pseudouridylate synthase J6625_19930 PF01479 S4 domain J6625_19935 PF13525 Outer membrane lipoprotein J6625_19940 PF03313 Serine dehydratase alpha chain J6625_19945 PF08348 YheO-like PAS domain J6625_19945 PF13309 HTH domain J6625_19950 PF02233 NAD(P) transhydrogenase beta subunit J6625_19955 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J6625_19955 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J6625_19955 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J6625_19960 PF00465 Iron-containing alcohol dehydrogenase J6625_19965 PF06719 AraC-type transcriptional regulator N-terminus J6625_19965 PF12833 Helix-turn-helix domain J6625_19970 PF08212 Lipocalin-like domain J6625_19980 PF02743 Cache domain J6625_19980 PF00672 HAMP domain J6625_19980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_19990 PF03466 LysR substrate binding domain J6625_19990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_20010 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J6625_20010 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J6625_20015 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain J6625_20015 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain J6625_20020 PF01316 Arginine repressor, DNA binding domain J6625_20020 PF02863 Arginine repressor, C-terminal domain J6625_20025 PF03606 C4-dicarboxylate anaerobic carrier J6625_20030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J6625_20030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J6625_20035 PF00696 Amino acid kinase family J6625_20050 PF02743 Cache domain J6625_20050 PF00672 HAMP domain J6625_20050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6625_20055 PF02653 Branched-chain amino acid transport system / permease component J6625_20060 PF00005 ABC transporter J6625_20065 PF13407 Periplasmic binding protein domain J6625_20070 PF02837 Glycosyl hydrolases family 2, sugar binding domain J6625_20070 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J6625_20070 PF02929 Beta galactosidase small chain J6625_20070 PF16353 Domain of unknown function(DUF4981) J6625_20070 PF00703 Glycosyl hydrolases family 2 J6625_20080 PF00356 Bacterial regulatory proteins, lacI family J6625_20085 PF16363 GDP-mannose 4,6 dehydratase J6625_20090 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain J6625_20090 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain J6625_20095 PF10509 Galactokinase galactose-binding signature J6625_20095 PF08544 GHMP kinases C terminal J6625_20095 PF00288 GHMP kinases N terminal domain J6625_20100 PF01263 Aldose 1-epimerase J6625_20105 PF00248 Aldo/keto reductase family J6625_20110 PF02673 Bacitracin resistance protein BacA J6625_20115 PF12973 ChrR Cupin-like domain J6625_20120 PF04545 Sigma-70, region 4 J6625_20120 PF04542 Sigma-70 region 2 J6625_20130 PF03485 Arginyl tRNA synthetase N terminal domain J6625_20130 PF05746 DALR anticodon binding domain J6625_20130 PF00750 tRNA synthetases class I (R) J6625_20140 PF00227 Proteasome subunit J6625_20145 PF00004 ATPase family associated with various cellular activities (AAA) J6625_20145 PF07724 AAA domain (Cdc48 subfamily) J6625_20145 PF10431 C-terminal, D2-small domain, of ClpB protein J6625_20150 PF07690 Major Facilitator Superfamily J6625_20165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6625_20170 PF00005 ABC transporter J6625_20185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J6625_20185 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J6625_20185 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_20185 PF18267 Rubredoxin NAD+ reductase C-terminal domain J6625_20185 PF04324 BFD-like [2Fe-2S] binding domain J6625_20190 PF13806 Rieske-like [2Fe-2S] domain J6625_20195 PF01226 Formate/nitrite transporter J6625_20200 PF10414 Sirohaem synthase dimerisation region J6625_20200 PF14824 Sirohaem biosynthesis protein central J6625_20200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J6625_20205 PF03448 MgtE intracellular N domain J6625_20205 PF01769 Divalent cation transporter J6625_20205 PF00571 CBS domain J6625_20210 PF03737 Aldolase/RraA J6625_20215 PF02592 Putative vitamin uptake transporter J6625_20225 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J6625_20230 PF00034 Cytochrome c J6625_20235 PF09382 RQC domain J6625_20235 PF16124 RecQ zinc-binding J6625_20235 PF00271 Helicase conserved C-terminal domain J6625_20235 PF00270 DEAD/DEAH box helicase J6625_20235 PF00570 HRDC domain J6625_20240 PF03061 Thioesterase superfamily J6625_20255 PF03473 MOSC domain J6625_20255 PF03475 3-alpha domain J6625_20260 PF00528 Binding-protein-dependent transport system inner membrane component J6625_20265 PF00528 Binding-protein-dependent transport system inner membrane component J6625_20270 PF08402 TOBE domain J6625_20270 PF00005 ABC transporter J6625_20275 PF13416 Bacterial extracellular solute-binding protein J6625_20280 PF13416 Bacterial extracellular solute-binding protein J6625_20285 PF00202 Aminotransferase class-III J6625_20290 PF00120 Glutamine synthetase, catalytic domain J6625_20295 PF01258 Prokaryotic dksA/traR C4-type zinc finger J6625_20310 PF05981 CreA protein J6625_20315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J6625_20315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J6625_20320 PF00012 Hsp70 protein J6625_20335 PF02903 Alpha amylase, N-terminal ig-like domain J6625_20335 PF00128 Alpha amylase, catalytic domain J6625_20350 PF05958 tRNA (Uracil-5-)-methyltransferase J6625_20355 PF00486 Transcriptional regulatory protein, C terminal J6625_20355 PF00072 Response regulator receiver domain J6625_20360 PF00512 His Kinase A (phospho-acceptor) domain J6625_20360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_20360 PF00672 HAMP domain J6625_20370 PF03949 Malic enzyme, NAD binding domain J6625_20370 PF00390 Malic enzyme, N-terminal domain J6625_20375 PF13460 NAD(P)H-binding J6625_20375 PF11066 Protein of unknown function (DUF2867) J6625_20380 PF01197 Ribosomal protein L31 J6625_20385 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J6625_20385 PF18074 Primosomal protein N C-terminal domain J6625_20385 PF17764 3′ DNA-binding domain (3′BD) J6625_20385 PF00271 Helicase conserved C-terminal domain J6625_20385 PF00270 DEAD/DEAH box helicase J6625_20395 PF01389 OmpA-like transmembrane domain J6625_20395 PF00691 OmpA family J6625_20400 PF00585 C-terminal regulatory domain of Threonine dehydratase J6625_20400 PF00291 Pyridoxal-phosphate dependent enzyme J6625_20405 PF00920 Dehydratase family J6625_20410 PF01063 Amino-transferase class IV J6625_20420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J6625_20420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J6625_20420 PF00205 Thiamine pyrophosphate enzyme, central domain J6625_20425 PF01078 Magnesium chelatase, subunit ChlI J6625_20425 PF13335 Magnesium chelatase, subunit ChlI C-terminal J6625_20430 PF01553 Acyltransferase J6625_20435 PF01553 Acyltransferase J6625_20440 PF04463 Protein of unknown function (DUF523) J6625_20450 PF00857 Isochorismatase family J6625_20455 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J6625_20455 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J6625_20460 PF01323 DSBA-like thioredoxin domain J6625_20465 PF01636 Phosphotransferase enzyme family J6625_20470 PF13746 4Fe-4S dicluster domain J6625_20470 PF12801 4Fe-4S binding domain J6625_20470 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase J6625_20475 PF06288 Protein of unknown function (DUF1040) J6625_20480 PF01590 GAF domain J6625_20480 PF00990 Diguanylate cyclase, GGDEF domain J6625_20480 PF00563 EAL domain J6625_20480 PF00360 Phytochrome region J6625_20485 PF00376 MerR family regulatory protein J6625_20485 PF09278 MerR, DNA binding J6625_20490 PF00403 Heavy-metal-associated domain J6625_20495 PF00156 Phosphoribosyl transferase domain J6625_20500 PF03725 3' exoribonuclease family, domain 2 J6625_20500 PF01138 3' exoribonuclease family, domain 1 J6625_20505 PF03755 YicC-like family, N-terminal region J6625_20505 PF08340 Domain of unknown function (DUF1732) J6625_20515 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J6625_20520 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J6625_20525 PF00535 Glycosyl transferase family 2 J6625_20530 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J6625_20535 PF01467 Cytidylyltransferase-like J6625_20540 PF04393 Protein of unknown function (DUF535) J6625_20545 PF06827 Zinc finger found in FPG and IleRS J6625_20545 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J6625_20545 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J6625_20555 PF00471 Ribosomal protein L33 J6625_20560 PF00830 Ribosomal L28 family J6625_20565 PF04002 RadC-like JAB domain J6625_20570 PF02441 Flavoprotein J6625_20570 PF04127 DNA / pantothenate metabolism flavoprotein J6625_20575 PF00692 dUTPase J6625_20580 PF00440 Bacterial regulatory proteins, tetR family J6625_20590 PF00924 Mechanosensitive ion channel J6625_20590 PF05552 Conserved TM helix J6625_20600 PF00342 Phosphoglucose isomerase J6625_20605 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J6625_20605 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J6625_20610 PF03466 LysR substrate binding domain J6625_20610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6625_20620 PF00583 Acetyltransferase (GNAT) family J6625_20620 PF13380 CoA binding domain J6625_20620 PF13607 Succinyl-CoA ligase like flavodoxin domain J6625_20645 PF12724 Flavodoxin domain J6625_20650 PF02386 Cation transport protein J6625_20655 PF09186 Domain of unknown function (DUF1949) J6625_20655 PF01205 Uncharacterized protein family UPF0029 J6625_20660 PF00557 Metallopeptidase family M24 J6625_20665 PF00501 AMP-binding enzyme J6625_20665 PF13193 AMP-binding enzyme C-terminal domain J6625_20670 PF00378 Enoyl-CoA hydratase/isomerase J6625_20670 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J6625_20670 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J6625_20675 PF02803 Thiolase, C-terminal domain J6625_20675 PF00108 Thiolase, N-terminal domain J6625_20680 PF00072 Response regulator receiver domain J6625_20680 PF00486 Transcriptional regulatory protein, C terminal J6625_20685 PF00512 His Kinase A (phospho-acceptor) domain J6625_20685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_20685 PF00672 HAMP domain J6625_20690 PF01547 Bacterial extracellular solute-binding protein J6625_20710 PF01206 Sulfurtransferase TusA J6625_20715 PF01042 Endoribonuclease L-PSP J6625_20735 PF00691 OmpA family J6625_20735 PF13488 Glycine zipper J6625_20745 PF00857 Isochorismatase family J6625_20750 PF13006 Insertion element 4 transposase N-terminal J6625_20750 PF01609 Transposase DDE domain J6625_20755 PF03352 Methyladenine glycosylase J6625_20760 PF02091 Glycyl-tRNA synthetase alpha subunit J6625_20765 PF05746 DALR anticodon binding domain J6625_20765 PF02092 Glycyl-tRNA synthetase beta subunit J6625_20780 PF00360 Phytochrome region J6625_20780 PF00990 Diguanylate cyclase, GGDEF domain J6625_20780 PF01590 GAF domain J6625_20780 PF00563 EAL domain J6625_20800 PF03222 Tryptophan/tyrosine permease family J6625_20805 PF03222 Tryptophan/tyrosine permease family J6625_20810 PF01212 Beta-eliminating lyase J6625_20825 PF12801 4Fe-4S binding domain J6625_20835 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6625_20835 PF18113 Rubredoxin binding C-terminal domain J6625_20840 PF00258 Flavodoxin J6625_20840 PF00753 Metallo-beta-lactamase superfamily J6625_20840 PF00301 Rubredoxin J6625_20845 PF00158 Sigma-54 interaction domain J6625_20845 PF01590 GAF domain J6625_20850 PF00356 Bacterial regulatory proteins, lacI family J6625_20855 PF13458 Periplasmic binding protein J6625_20860 PF02653 Branched-chain amino acid transport system / permease component J6625_20865 PF11862 Domain of unknown function (DUF3382) J6625_20865 PF02653 Branched-chain amino acid transport system / permease component J6625_20870 PF00005 ABC transporter J6625_20870 PF12399 Branched-chain amino acid ATP-binding cassette transporter J6625_20875 PF00005 ABC transporter J6625_20885 PF01810 LysE type translocator J6625_20890 PF00581 Rhodanese-like domain J6625_20895 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease J6625_20895 PF01694 Rhomboid family J6625_20905 PF12262 Bacterial virulence factor lipase N-terminal J6625_20910 PF04380 Membrane fusogenic activity J6625_20915 PF00175 Oxidoreductase NAD-binding domain J6625_20920 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase J6625_20930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J6625_20930 PF07498 Rho termination factor, N-terminal domain J6625_20930 PF07497 Rho termination factor, RNA-binding domain J6625_20935 PF00085 Thioredoxin J6625_20940 PF00271 Helicase conserved C-terminal domain J6625_20940 PF00270 DEAD/DEAH box helicase J6625_20945 PF02541 Ppx/GppA phosphatase family J6625_20955 PF04445 Putative SAM-dependent methyltransferase J6625_20960 PF03707 Bacterial signalling protein N terminal repeat J6625_20960 PF00990 Diguanylate cyclase, GGDEF domain J6625_20960 PF00563 EAL domain J6625_20965 PF01432 Peptidase family M3 J6625_20970 PF00490 Delta-aminolevulinic acid dehydratase J6625_20975 PF01026 TatD related DNase J6625_20980 PF00902 Sec-independent protein translocase protein (TatC) J6625_20985 PF02416 mttA/Hcf106 family J6625_20990 PF02416 mttA/Hcf106 family J6625_20995 PF03109 ABC1 family J6625_21000 PF02036 SCP-2 sterol transfer family J6625_21005 PF01209 ubiE/COQ5 methyltransferase family J6625_21010 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J6625_21015 PF07969 Amidohydrolase family J6625_21055 PF03544 Gram-negative bacterial TonB protein C-terminal J6625_21060 PF02472 Biopolymer transport protein ExbD/TolR J6625_21065 PF01618 MotA/TolQ/ExbB proton channel family J6625_21070 PF01618 MotA/TolQ/ExbB proton channel family J6625_21080 PF00196 Bacterial regulatory proteins, luxR family J6625_21080 PF03472 Autoinducer binding domain J6625_21085 PF01380 SIS domain J6625_21090 PF00455 DeoR C terminal sensor domain J6625_21090 PF08220 DeoR-like helix-turn-helix domain J6625_21095 PF00072 Response regulator receiver domain J6625_21095 PF00486 Transcriptional regulatory protein, C terminal J6625_21100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6625_21100 PF00672 HAMP domain J6625_21100 PF00512 His Kinase A (phospho-acceptor) domain J6625_21105 PF00905 Penicillin binding protein transpeptidase domain J6625_21110 PF06123 Inner membrane protein CreD J6625_21115 PF14602 Hexapeptide repeat of succinyl-transferase J6625_21115 PF12804 MobA-like NTP transferase domain J6625_21115 PF00132 Bacterial transferase hexapeptide (six repeats) J6625_21120 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J6625_21120 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J6625_21125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J6625_21125 PF02874 ATP synthase alpha/beta family, beta-barrel domain J6625_21130 PF00231 ATP synthase J6625_21135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J6625_21135 PF02874 ATP synthase alpha/beta family, beta-barrel domain J6625_21135 PF00306 ATP synthase alpha/beta chain, C terminal domain J6625_21140 PF00213 ATP synthase delta (OSCP) subunit J6625_21145 PF00430 ATP synthase B/B' CF(0) J6625_21150 PF00137 ATP synthase subunit C J6625_21155 PF00119 ATP synthase A chain J6625_21165 PF02195 ParB-like nuclease domain J6625_21165 PF17762 HTH domain found in ParB protein J6625_21170 PF13614 AAA domain J6625_21175 PF02527 rRNA small subunit methyltransferase G J6625_21180 PF01134 Glucose inhibited division protein A J6625_21180 PF13932 GidA associated domain J6625_21185 PF00258 Flavodoxin J6625_21190 PF00593 TonB dependent receptor J6625_21190 PF07715 TonB-dependent Receptor Plug Domain J6625_21195 PF00005 ABC transporter J6625_21200 PF00005 ABC transporter J6625_21205 PF01497 Periplasmic binding protein J6625_21210 PF01032 FecCD transport family J6625_21215 PF01609 Transposase DDE domain J6625_21215 PF13006 Insertion element 4 transposase N-terminal J6625_21220 PF07804 HipA-like C-terminal domain J6625_21220 PF13657 HipA N-terminal domain J6625_21245 PF01926 50S ribosome-binding GTPase J6625_21245 PF12631 MnmE helical domain J6625_21245 PF10396 GTP-binding protein TrmE N-terminus J6625_21250 PF02096 60Kd inner membrane protein J6625_21250 PF14849 YidC periplasmic domain J6625_21255 PF01809 Putative membrane protein insertion efficiency factor J6625_21260 PF00825 Ribonuclease P J6625_21265 PF00468 Ribosomal protein L34 J6625_21270 PF00005 ABC transporter J6625_21275 PF00528 Binding-protein-dependent transport system inner membrane component J6625_21280 PF00497 Bacterial extracellular solute-binding proteins, family 3