locus-tag	class	description
J6625_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
J6625_00010	COG0592	DNA-directed DNA polymerase activity
J6625_00020	COG0187	DNA topoisomerase II activity
J6625_00025	COG2207	Transcriptional regulator
J6625_00030	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
J6625_00035	COG0071	Belongs to the small heat shock protein (HSP20) family
J6625_00040	COG0071	Belongs to the small heat shock protein (HSP20) family
J6625_00045	COG3977	Valine--pyruvate aminotransferase
J6625_00060	COG2814	Major facilitator Superfamily
J6625_00065	COG0745	RESPONSE REGULATOR receiver
J6625_00070	COG2205	protein histidine kinase activity
J6625_00090	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
J6625_00095	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J6625_00095	COG4191	Histidine kinase
J6625_00100	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
J6625_00105	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
J6625_00110	COG1309	transcriptional regulator
J6625_00140	COG0561	phosphatase activity
J6625_00145	COG2267	carboxylic ester hydrolase activity
J6625_00150	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
J6625_00155	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
J6625_00160	COG1758	RNA polymerase activity
J6625_00170	COG0859	PFAM glycosyl transferase family 9
J6625_00175	COG3642	lipopolysaccharide core region biosynthetic process
J6625_00215	COG0589	response to stress
J6625_00220	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
J6625_00225	COG3706	GGDEF domain
J6625_00230	COG1528	Iron-storage protein
J6625_00235	COG2081	HI0933 family
J6625_00240	COG2223	nitrite transmembrane transporter activity
J6625_00245	COG1280	lysine exporter protein (LysE YggA)
J6625_00260	COG3188	usher protein
J6625_00280	COG2205	protein histidine kinase activity
J6625_00280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J6625_00290	COG3275	phosphorelay sensor kinase activity
J6625_00295	COG3279	Response regulator of the LytR AlgR family
J6625_00300	COG2223	nitrite transmembrane transporter activity
J6625_00305	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
J6625_00310	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
J6625_00325	COG0583	DNA-binding transcription factor activity
J6625_00375	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
J6625_00380	COG2166	iron-sulfur cluster assembly
J6625_00385	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
J6625_00405	COG1063	alcohol dehydrogenase
J6625_00420	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
J6625_00425	COG0438	transferase activity, transferring glycosyl groups
J6625_00440	COG0110	maltose O-acetyltransferase activity
J6625_00465	COG1580	Controls the rotational direction of flagella during chemotaxis
J6625_00470	COG3161	chorismate lyase activity
J6625_00475	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
J6625_00480	COG2937	Belongs to the GPAT DAPAT family
J6625_00485	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
J6625_00500	COG0534	Mate efflux family protein
J6625_00505	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
J6625_00510	COG2205	protein histidine kinase activity
J6625_00515	COG0745	RESPONSE REGULATOR receiver
J6625_00525	COG1045	serine acetyltransferase
J6625_00535	COG3074	FtsZ-dependent cytokinesis
J6625_00540	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
J6625_00545	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J6625_00545	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J6625_00550	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
J6625_00585	COG1609	Transcriptional regulator
J6625_00590	COG3250	beta-galactosidase activity
J6625_00595	COG2731	YhcH YjgK YiaL family protein
J6625_00600	COG0531	amino acid
J6625_00605	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J6625_00610	COG0531	amino acid
J6625_00615	COG0385	Bile acid
J6625_00620	COG1262	PFAM Formylglycine-generating sulfatase enzyme
J6625_00645	COG0583	DNA-binding transcription factor activity
J6625_00660	COG1079	Belongs to the binding-protein-dependent transport system permease family
J6625_00665	COG4603	Belongs to the binding-protein-dependent transport system permease family
J6625_00670	COG3845	ABC transporter
J6625_00675	COG1744	ABC transporter substrate-binding protein PnrA-like
J6625_00680	COG0210	DNA helicase
J6625_00690	COG3039	Transposase
J6625_00700	COG0583	DNA-binding transcription factor activity
J6625_00740	COG1280	lysine exporter protein (LysE YggA)
J6625_00750	COG2962	Rard protein
J6625_00760	COG1012	belongs to the aldehyde dehydrogenase family
J6625_00765	COG1396	sequence-specific DNA binding
J6625_00770	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
J6625_00780	COG0519	Catalyzes the synthesis of GMP from XMP
J6625_00780	COG0518	GMP synthase (glutamine-hydrolyzing) activity
J6625_00790	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
J6625_00810	COG1322	Protein conserved in bacteria
J6625_00815	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
J6625_00820	COG0569	domain protein
J6625_00825	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
J6625_00825	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
J6625_00830	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
J6625_00835	COG0242	peptide deformylase activity
J6625_00845	COG0758	DNA mediated transformation
J6625_00850	COG2922	Belongs to the Smg family
J6625_00855	COG0551	DNA topoisomerase type I activity
J6625_00860	COG0009	L-threonylcarbamoyladenylate synthase
J6625_00865	COG0408	coproporphyrinogen oxidase activity
J6625_00870	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
J6625_00875	COG0218	Necessary for normal cell division and for the maintenance of normal septation
J6625_00885	COG3078	GTPase activator activity
J6625_00900	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
J6625_00910	COG3852	Histidine kinase
J6625_00920	COG0174	glutamine synthetase
J6625_00925	COG1217	gtp-binding protein TYPA
J6625_00930	COG1295	ribonuclease BN
J6625_00935	COG1490	D-aminoacyl-tRNA deacylase activity
J6625_00945	COG0456	acetyltransferase
J6625_00955	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
J6625_00960	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J6625_00965	COG2610	gluconate transmembrane transporter activity
J6625_00970	COG3265	gluconokinase activity
J6625_00975	COG0129	dihydroxy-acid dehydratase activity
J6625_00980	COG0800	Aldolase
J6625_00995	COG1609	Transcriptional regulator
J6625_01005	COG4942	peptidase
J6625_01010	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
J6625_01015	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J6625_01020	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
J6625_01025	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
J6625_01030	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
J6625_01030	COG0316	Belongs to the HesB IscA family
J6625_01035	COG1040	competence protein
J6625_01040	COG0596	Alpha beta hydrolase
J6625_01055	COG2183	response to ionizing radiation
J6625_01060	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
J6625_01070	COG2205	protein histidine kinase activity
J6625_01080	COG0051	transcription antitermination factor activity, RNA binding
J6625_01085	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
J6625_01090	COG0088	Forms part of the polypeptide exit tunnel
J6625_01095	COG0089	rRNA binding
J6625_01100	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
J6625_01105	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
J6625_01110	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
J6625_01115	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
J6625_01120	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
J6625_01125	COG0255	Belongs to the universal ribosomal protein uL29 family
J6625_01130	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
J6625_01135	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
J6625_01140	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
J6625_01145	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
J6625_01150	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
J6625_01155	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
J6625_01160	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
J6625_01165	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
J6625_01170	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
J6625_01175	COG1841	ribosomal large subunit assembly
J6625_01180	COG0200	Binds to the 23S rRNA
J6625_01185	COG0201	protein transport
J6625_01190	COG0257	Belongs to the bacterial ribosomal protein bL36 family
J6625_01195	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
J6625_01200	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
J6625_01205	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
J6625_01210	COG0202	RNA polymerase activity
J6625_01215	COG0203	ribosomal protein L17
J6625_01270	COG2249	NAD(P)H dehydrogenase (quinone) activity
J6625_01275	COG0583	DNA-binding transcription factor activity
J6625_01280	COG4221	oxidoreductase activity
J6625_01295	COG1770	oligopeptidase
J6625_01300	COG2358	TRAP transporter, solute receptor (TAXI family
J6625_01315	COG3714	YhhN family
J6625_01330	COG0583	DNA-binding transcription factor activity
J6625_01340	COG1301	dicarboxylic acid transport
J6625_01350	COG2095	MarC family integral membrane protein
J6625_01360	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
J6625_01370	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
J6625_01380	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J6625_01405	COG0742	ribosomal rna small subunit methyltransferase
J6625_01410	COG0552	protein localization to endoplasmic reticulum
J6625_01415	COG2884	Cell division ATP-binding protein ftsE
J6625_01420	COG2177	Part of the ABC transporter FtsEX involved in
J6625_01430	COG0288	reversible hydration of carbon dioxide
J6625_01435	COG2188	Transcriptional regulator
J6625_01445	COG1228	amidohydrolase
J6625_01450	COG0010	Belongs to the arginase family
J6625_01455	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
J6625_01460	COG2986	histidine ammonia-lyase
J6625_01465	COG0387	Pfam Sodium calcium exchanger
J6625_01470	COG2200	EAL domain
J6625_01525	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
J6625_01530	COG1459	type II secretion system
J6625_01575	COG1077	Cell shape determining protein MreB Mrl
J6625_01580	COG1792	Involved in formation and maintenance of cell shape
J6625_01585	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
J6625_01590	COG0424	maF-like protein
J6625_01595	COG1530	ribonuclease E activity
J6625_01600	COG3164	Protein of unknown function
J6625_01605	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
J6625_01610	COG0312	modulator of DNA gyrase
J6625_01630	COG1263	PTS System
J6625_01630	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J6625_01635	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
J6625_01650	COG0477	Major facilitator Superfamily
J6625_01660	COG2321	neutral zinc metallopeptidase
J6625_01695	COG0189	ligase activity
J6625_01700	COG0642	Histidine kinase
J6625_01705	COG0745	RESPONSE REGULATOR receiver
J6625_01720	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
J6625_01730	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
J6625_01740	COG2022	thiamine diphosphate biosynthetic process
J6625_01745	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
J6625_01760	COG0110	maltose O-acetyltransferase activity
J6625_01775	COG3932	Exopolysaccharide synthesis, ExoD
J6625_01795	COG1733	regulation of RNA biosynthetic process
J6625_01825	COG1494	fructose-1,6-bisphosphatase
J6625_01835	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
J6625_01840	COG5007	Belongs to the BolA IbaG family
J6625_01850	COG2854	intermembrane phospholipid transfer
J6625_01855	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
J6625_01860	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
J6625_01865	COG1127	ABC transporter
J6625_01870	COG0517	IMP dehydrogenase activity
J6625_01870	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
J6625_01875	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
J6625_01885	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
J6625_01890	COG1137	ATPase activity
J6625_01895	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
J6625_01905	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J6625_01910	COG1660	Displays ATPase and GTPase activities
J6625_01915	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
J6625_01935	COG3964	amidohydrolase
J6625_01965	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J6625_01970	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J6625_01980	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
J6625_01985	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
J6625_01990	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
J6625_01995	COG0723	plastoquinol--plastocyanin reductase activity
J6625_02000	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
J6625_02005	COG2857	Cytochrome c1
J6625_02010	COG0625	glutathione transferase activity
J6625_02015	COG2969	positive regulation of protein catabolic process
J6625_02020	COG2823	Periplasmic or secreted lipoprotein
J6625_02025	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
J6625_02030	COG0792	nuclease activity
J6625_02035	COG3107	peptidoglycan biosynthetic process
J6625_02040	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
J6625_02050	COG2001	Belongs to the MraZ family
J6625_02055	COG0275	rRNA processing
J6625_02060	COG3116	cell division
J6625_02065	COG0768	penicillin binding
J6625_02070	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
J6625_02075	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
J6625_02080	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
J6625_02085	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
J6625_02090	COG0772	Belongs to the SEDS family
J6625_02095	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
J6625_02100	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
J6625_02105	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
J6625_02110	COG0849	cell division
J6625_02115	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
J6625_02120	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
J6625_02130	COG0653	protein targeting
J6625_02140	COG0494	nUDIX hydrolase
J6625_02145	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
J6625_02150	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
J6625_02160	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
J6625_02165	COG1459	type II secretion system
J6625_02170	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
J6625_02195	COG2186	Transcriptional regulator
J6625_02200	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
J6625_02205	COG0508	dehydrogenase complex catalyzes the overall conversion of
J6625_02210	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
J6625_02220	COG0840	transmembrane signaling receptor activity
J6625_02225	COG0840	transmembrane signaling receptor activity
J6625_02230	COG1752	Esterase of the alpha-beta hydrolase superfamily
J6625_02235	COG1049	propionate catabolic process, 2-methylcitrate cycle
J6625_02240	COG2200	EAL domain
J6625_02250	COG1280	lysine exporter protein (LysE YggA)
J6625_02260	COG0523	cobalamin synthesis protein
J6625_02265	COG0477	Major facilitator Superfamily
J6625_02280	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
J6625_02285	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
J6625_02335	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
J6625_02345	COG1546	Belongs to the CinA family
J6625_02350	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
J6625_02355	COG2137	regulation of response to DNA damage stimulus
J6625_02360	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
J6625_02365	COG0527	aspartate kinase activity
J6625_02370	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
J6625_02405	COG1686	Belongs to the peptidase S11 family
J6625_02415	COG0586	Pfam SNARE associated Golgi protein
J6625_02420	COG1253	flavin adenine dinucleotide binding
J6625_02425	COG0525	valine-tRNA ligase activity
J6625_02435	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
J6625_02440	COG0795	lipopolysaccharide-transporting ATPase activity
J6625_02445	COG0795	lipopolysaccharide-transporting ATPase activity
J6625_02465	COG0004	ammonium transporteR
J6625_02470	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
J6625_02485	COG2165	general secretion pathway protein
J6625_02490	COG0084	hydrolase, TatD family'
J6625_02495	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J6625_02505	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
J6625_02510	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
J6625_02515	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
J6625_02520	COG0813	purine-nucleoside phosphorylase activity
J6625_02525	COG5002	protein histidine kinase activity
J6625_02525	COG3447	MASE1 domain protein
J6625_02525	COG5001	Diguanylate cyclase
J6625_02535	COG0560	Phosphoserine phosphatase
J6625_02550	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
J6625_02560	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
J6625_02565	COG0776	regulation of translation
J6625_02580	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
J6625_02585	COG0735	belongs to the Fur family
J6625_02605	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
J6625_02610	COG0513	Belongs to the DEAD box helicase family
J6625_02615	COG3022	response to hydroperoxide
J6625_02630	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
J6625_02635	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J6625_02640	COG0762	integral membrane protein
J6625_02645	COG1872	DUF167
J6625_02665	COG3112	Uncharacterised protein family (UPF0231)
J6625_02670	COG3835	regulator
J6625_02675	COG2610	gluconate transmembrane transporter activity
J6625_02680	COG1929	Belongs to the glycerate kinase type-1 family
J6625_02695	COG0583	DNA-binding transcription factor activity
J6625_02700	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J6625_02715	COG0347	Belongs to the P(II) protein family
J6625_02730	COG3842	ATPase activity
J6625_02735	COG2837	iron assimilation
J6625_02740	COG1438	arginine binding
J6625_02745	COG1126	abc transporter atp-binding protein
J6625_02750	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J6625_02755	COG4215	(ABC) transporter
J6625_02760	COG4160	amino acid transport
J6625_02765	COG0039	L-malate dehydrogenase activity
J6625_02770	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
J6625_02775	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
J6625_02775	COG1017	nitric oxide dioxygenase activity
J6625_02785	COG4536	flavin adenine dinucleotide binding
J6625_02790	COG4137	Cytochrome C assembly protein
J6625_02795	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
J6625_02800	COG0228	four-way junction DNA binding
J6625_02805	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
J6625_02810	COG0336	Belongs to the RNA methyltransferase TrmD family
J6625_02815	COG0335	large ribosomal subunit rRNA binding
J6625_02830	COG1051	belongs to the nudix hydrolase family
J6625_02840	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
J6625_02845	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
J6625_02850	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
J6625_02860	COG0583	DNA-binding transcription factor activity
J6625_02865	COG0640	Transcriptional regulator
J6625_02870	COG0268	Binds directly to 16S ribosomal RNA
J6625_02875	COG0728	peptidoglycan biosynthetic process
J6625_02880	COG0196	riboflavin kinase activity
J6625_02885	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
J6625_02890	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
J6625_02895	COG1047	Peptidyl-prolyl cis-trans
J6625_02900	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
J6625_02940	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
J6625_02940	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
J6625_02955	COG1854	S-ribosylhomocysteine lyase activity
J6625_02960	COG3706	GGDEF domain
J6625_02965	COG0557	exoribonuclease II activity
J6625_02970	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
J6625_02980	COG2153	protein acetylation
J6625_02990	COG1914	H( )-stimulated, divalent metal cation uptake system
J6625_02995	COG0360	Binds together with S18 to 16S ribosomal RNA
J6625_03000	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
J6625_03005	COG0359	binds to the 23S rRNA
J6625_03045	COG1238	metal cluster binding
J6625_03050	COG0612	Peptidase, M16
J6625_03055	COG2918	glutathione biosynthetic process
J6625_03060	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
J6625_03065	COG1027	Aspartate ammonia-lyase
J6625_03070	COG3030	protein affecting phage T7 exclusion by the F plasmid
J6625_03075	COG0534	Mate efflux family protein
J6625_03080	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
J6625_03085	COG0459	protein refolding
J6625_03105	COG0564	pseudouridine synthase activity
J6625_03110	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
J6625_03140	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
J6625_03150	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
J6625_03155	COG4208	sulfate ABC transporter
J6625_03160	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
J6625_03165	COG0583	DNA-binding transcription factor activity
J6625_03170	COG3397	chitin binding
J6625_03175	COG0840	transmembrane signaling receptor activity
J6625_03200	COG1328	CTP reductase activity
J6625_03205	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
J6625_03220	COG1448	Aminotransferase
J6625_03225	COG2194	sulfuric ester hydrolase activity
J6625_03245	COG1215	transferase activity, transferring glycosyl groups
J6625_03255	COG0457	Tetratricopeptide repeat
J6625_03255	COG3118	belongs to the thioredoxin family
J6625_03290	COG0513	Belongs to the DEAD box helicase family
J6625_03295	COG0840	transmembrane signaling receptor activity
J6625_03305	COG4166	transmembrane transport
J6625_03320	COG1024	Enoyl-CoA hydratase
J6625_03335	COG4221	oxidoreductase activity
J6625_03340	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
J6625_03345	COG0442	prolyl-tRNA aminoacylation
J6625_03350	COG0840	transmembrane signaling receptor activity
J6625_03355	COG0632	four-way junction helicase activity
J6625_03360	COG2255	four-way junction helicase activity
J6625_03370	COG1271	oxidase subunit
J6625_03375	COG1294	oxidase, subunit
J6625_03380	COG4890	Cyd operon protein YbgT
J6625_03385	COG3790	cyd operon protein YbgE
J6625_03390	COG0824	Thioesterase
J6625_03395	COG0811	peptide transport
J6625_03410	COG0823	Involved in the tonB-independent uptake of proteins
J6625_03415	COG2885	chlorophyll binding
J6625_03420	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
J6625_03495	COG0840	transmembrane signaling receptor activity
J6625_03500	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
J6625_03510	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
J6625_03515	COG1640	4-alpha-glucanotransferase
J6625_03520	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
J6625_03550	COG2130	NADP-dependent
J6625_03555	COG1846	Transcriptional regulator
J6625_03585	COG0561	phosphatase activity
J6625_03600	COG0733	neurotransmitter:sodium symporter activity
J6625_03605	COG0733	neurotransmitter:sodium symporter activity
J6625_03620	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J6625_03635	COG1794	racemase activity, acting on amino acids and derivatives
J6625_03645	COG1022	Amp-dependent synthetase and ligase
J6625_03655	COG0456	acetyltransferase
J6625_03670	COG2425	protein containing a von Willebrand factor type A (vWA) domain
J6625_03675	COG5002	protein histidine kinase activity
J6625_03675	COG5001	Diguanylate cyclase
J6625_03685	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
J6625_03695	COG0456	acetyltransferase
J6625_03705	COG0456	acetyltransferase
J6625_03710	COG1902	pentaerythritol trinitrate reductase activity
J6625_03720	COG2852	Protein conserved in bacteria
J6625_03730	COG2957	Belongs to the agmatine deiminase family
J6625_03735	COG0154	amidase activity
J6625_03775	COG1917	Cupin 2, conserved barrel domain protein
J6625_03775	COG2207	Transcriptional regulator
J6625_03785	COG0513	Belongs to the DEAD box helicase family
J6625_03790	COG2203	Gaf domain
J6625_03790	COG2199	diguanylate cyclase activity
J6625_03825	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
J6625_03835	COG0577	efflux transmembrane transporter activity
J6625_03835	COG1136	(ABC) transporter
J6625_03840	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
J6625_03845	COG0745	RESPONSE REGULATOR receiver
J6625_03850	COG2205	protein histidine kinase activity
J6625_03900	COG1280	lysine exporter protein (LysE YggA)
J6625_03905	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
J6625_03920	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
J6625_03950	COG0745	RESPONSE REGULATOR receiver
J6625_03955	COG3104	oligopeptide transport
J6625_03960	COG1210	Utp--glucose-1-phosphate uridylyltransferase
J6625_03965	COG1555	photosystem II stabilization
J6625_03975	COG2350	Protein conserved in bacteria
J6625_03980	COG2917	probably involved in intracellular septation
J6625_03985	COG0076	glutamate decarboxylase activity
J6625_03990	COG1272	protein, Hemolysin III
J6625_03995	COG0569	domain protein
J6625_03995	COG2985	domain, Protein
J6625_04010	COG0477	Major facilitator Superfamily
J6625_04015	COG0583	DNA-binding transcription factor activity
J6625_04020	COG3227	Zinc metalloprotease (Elastase)
J6625_04025	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J6625_04030	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J6625_04040	COG2731	YhcH YjgK YiaL family protein
J6625_04050	COG0668	transmembrane transport
J6625_04060	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
J6625_04070	COG0789	Transcriptional regulator
J6625_04080	COG1484	DNA-dependent DNA replication
J6625_04085	COG4584	PFAM Integrase catalytic
J6625_04125	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
J6625_04135	COG0488	(ABC) transporter
J6625_04140	COG0516	GMP reductase activity
J6625_04140	COG0517	IMP dehydrogenase activity
J6625_04150	COG0784	Response regulator, receiver
J6625_04150	COG0835	chemotaxis
J6625_04155	COG2755	lipolytic protein G-D-S-L family
J6625_04160	COG4181	ATPase activity
J6625_04165	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
J6625_04170	COG1090	epimerase
J6625_04175	COG2200	EAL domain
J6625_04180	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J6625_04185	COG4935	Belongs to the peptidase S8 family
J6625_04185	COG2234	aminopeptidase activity
J6625_04190	COG0220	tRNA (guanine-N7-)-methyltransferase activity
J6625_04195	COG3171	Protein conserved in bacteria
J6625_04200	COG2066	Belongs to the glutaminase family
J6625_04205	COG2897	thiosulfate sulfurtransferase activity
J6625_04215	COG1132	(ABC) transporter
J6625_04240	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
J6625_04250	COG5001	Diguanylate cyclase
J6625_04250	COG3300	MHYT domain
J6625_04270	COG4628	conserved protein (DUF2132)
J6625_04275	COG0688	phosphatidylethanolamine metabolic process
J6625_04280	COG1162	GTPase activity
J6625_04285	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
J6625_04325	COG1278	Cold shock
J6625_04335	COG0840	transmembrane signaling receptor activity
J6625_04340	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
J6625_04395	COG0848	biopolymer transport protein
J6625_04400	COG0811	peptide transport
J6625_04405	COG0811	peptide transport
J6625_04415	COG4206	TonB-dependent receptor
J6625_04420	COG4174	ABC transporter (Permease)
J6625_04425	COG4239	(ABC) transporter, permease
J6625_04435	COG0444	Belongs to the ABC transporter superfamily
J6625_04440	COG4608	Belongs to the ABC transporter superfamily
J6625_04445	COG2195	Cleaves the N-terminal amino acid of tripeptides
J6625_04450	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
J6625_04455	COG1073	alpha beta
J6625_04470	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
J6625_04500	COG0243	molybdopterin cofactor binding
J6625_04505	COG1648	precorrin-2 dehydrogenase activity
J6625_04505	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
J6625_04515	COG1116	anion transmembrane transporter activity
J6625_04515	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
J6625_04520	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
J6625_04525	COG1116	anion transmembrane transporter activity
J6625_04530	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
J6625_04530	COG2146	nitrite reductase [NAD(P)H] activity
J6625_04535	COG2146	nitrite reductase [NAD(P)H] activity
J6625_04535	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
J6625_04540	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
J6625_04545	COG2313	pseudouridylate synthase activity
J6625_04550	COG2313	pseudouridylate synthase activity
J6625_04575	COG0521	Mo-molybdopterin cofactor biosynthetic process
J6625_04590	COG2966	Psort location CytoplasmicMembrane, score
J6625_04595	COG3610	response to peptide
J6625_04605	COG4175	Glycine betaine
J6625_04610	COG4176	ABC-type proline glycine betaine transport system permease component
J6625_04615	COG2113	Glycine betaine
J6625_04620	COG0175	sulfate reduction
J6625_04625	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
J6625_04630	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
J6625_04640	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
J6625_04660	COG0786	glutamate:sodium symporter activity
J6625_04665	COG0252	asparaginase activity
J6625_04670	COG3139	Protein of unknown function (DUF1315)
J6625_04690	COG0616	signal peptide processing
J6625_04695	COG0446	pyridine nucleotide-disulphide oxidoreductase
J6625_04695	COG1902	pentaerythritol trinitrate reductase activity
J6625_04700	COG0778	Nitroreductase
J6625_04710	COG0110	maltose O-acetyltransferase activity
J6625_04715	COG2264	protein methyltransferase activity
J6625_04720	COG0604	alcohol dehydrogenase
J6625_04725	COG0583	DNA-binding transcription factor activity
J6625_04730	COG1263	PTS System
J6625_04730	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J6625_04730	COG2190	(PTS) system
J6625_04735	COG4145	pantothenate transmembrane transporter activity
J6625_04740	COG3924	membrane
J6625_04745	COG0439	Biotin carboxylase
J6625_04750	COG0511	ligase activity, forming carbon-carbon bonds
J6625_04755	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
J6625_04760	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
J6625_04775	COG3381	protein complex oligomerization
J6625_04785	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
J6625_04795	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
J6625_04800	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
J6625_04800	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
J6625_04815	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
J6625_04820	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
J6625_04825	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
J6625_04830	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
J6625_04835	COG4172	Belongs to the ABC transporter superfamily
J6625_04845	COG0601	transmembrane transport
J6625_04850	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J6625_04855	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
J6625_04860	COG0142	geranyltranstransferase activity
J6625_04865	COG1722	exodeoxyribonuclease VII activity
J6625_04870	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
J6625_04875	COG1360	Flagellar Motor Protein
J6625_04890	COG1534	Rna-binding protein
J6625_04895	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
J6625_04905	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
J6625_04910	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
J6625_04915	COG0149	triose-phosphate isomerase activity
J6625_04920	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
J6625_04935	COG0779	Required for maturation of 30S ribosomal subunits
J6625_04940	COG0195	Participates in both transcription termination and antitermination
J6625_04945	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
J6625_04950	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
J6625_04955	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
J6625_04960	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
J6625_04965	COG1185	polyribonucleotide nucleotidyltransferase activity
J6625_04970	COG2211	Major facilitator Superfamily
J6625_04975	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
J6625_04980	COG1422	Protein of unknown function (DUF1090)
J6625_04985	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
J6625_04990	COG0826	peptidase U32
J6625_05010	COG0312	modulator of DNA gyrase
J6625_05015	COG0312	modulator of DNA gyrase
J6625_05025	COG4974	Belongs to the 'phage' integrase family
J6625_05030	COG1970	mechanosensitive ion channel activity
J6625_05040	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
J6625_05045	COG0789	Transcriptional regulator
J6625_05060	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
J6625_05070	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
J6625_05075	COG0321	lipoyl(octanoyl) transferase activity
J6625_05080	COG2921	Belongs to the UPF0250 family
J6625_05085	COG1686	Belongs to the peptidase S11 family
J6625_05090	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
J6625_05095	COG2951	lytic endotransglycosylase activity
J6625_05100	COG0772	Belongs to the SEDS family
J6625_05105	COG0768	penicillin binding
J6625_05110	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
J6625_05115	COG0799	negative regulation of ribosome biogenesis
J6625_05120	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
J6625_05140	COG0495	leucyl-tRNA aminoacylation
J6625_05145	COG2888	peptidyl-tyrosine sulfation
J6625_05150	COG0815	Transfers the fatty acyl group on membrane lipoproteins
J6625_05155	COG4535	Mg2 and Co2 transporter CorC
J6625_05160	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
J6625_05165	COG1702	phosphate starvation-inducible protein PhoH
J6625_05170	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
J6625_05175	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
J6625_05180	COG1335	isochorismatase
J6625_05185	COG1278	Cold shock
J6625_05200	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
J6625_05205	COG2199	diguanylate cyclase activity
J6625_05215	COG2199	diguanylate cyclase activity
J6625_05225	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
J6625_05240	COG1464	Belongs to the NlpA lipoprotein family
J6625_05245	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
J6625_05250	COG2011	ABC-type metal ion transport system permease component
J6625_05255	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
J6625_05265	COG0516	GMP reductase activity
J6625_05270	COG0189	ligase activity
J6625_05270	COG4067	protein conserved in archaea
J6625_05290	COG0300	oxidoreductase activity
J6625_05310	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
J6625_05315	COG3214	Protein conserved in bacteria
J6625_05330	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
J6625_05335	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
J6625_05340	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
J6625_05345	COG1053	succinate dehydrogenase
J6625_05355	COG0584	glycerophosphoryl diester phosphodiesterase
J6625_05360	COG1511	domain protein
J6625_05360	COG3264	Mechanosensitive ion channel
J6625_05370	COG0739	heme binding
J6625_05385	COG0583	DNA-binding transcription factor activity
J6625_05400	COG0583	DNA-binding transcription factor activity
J6625_05405	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
J6625_05435	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
J6625_05440	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
J6625_05450	COG0338	D12 class N6 adenine-specific DNA methyltransferase
J6625_05455	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
J6625_05460	COG0546	phosphoglycolate phosphatase activity
J6625_05465	COG0180	Tryptophanyl-tRNA synthetase
J6625_05480	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
J6625_05490	COG1012	belongs to the aldehyde dehydrogenase family
J6625_05515	COG2801	Transposase and inactivated derivatives
J6625_05520	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
J6625_05535	COG0657	acetylesterase activity
J6625_05545	COG0471	metal ion transport
J6625_05545	COG0490	domain, Protein
J6625_05590	COG0012	GTP binding
J6625_05595	COG0193	aminoacyl-tRNA hydrolase activity
J6625_05600	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
J6625_05610	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
J6625_05615	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
J6625_05620	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
J6625_05625	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
J6625_05630	COG2890	protein-(glutamine-N5) methyltransferase activity
J6625_05640	COG2912	Transglutaminase-like superfamily
J6625_05645	COG2877	3-deoxy-8-phosphooctulonate synthase activity
J6625_05650	COG1301	dicarboxylic acid transport
J6625_05660	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
J6625_05675	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
J6625_05680	COG1115	amino acid carrier protein
J6625_05700	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
J6625_05710	COG0189	ligase activity
J6625_05715	COG1385	rRNA (uridine-N3-)-methyltransferase activity
J6625_05725	COG3091	SprT-like family
J6625_05735	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
J6625_05765	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
J6625_05770	COG0739	heme binding
J6625_05775	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
J6625_05780	COG3408	Glycogen debranching enzyme
J6625_05780	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
J6625_05790	COG1881	PFAM PEBP family protein
J6625_05795	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
J6625_05800	COG0583	DNA-binding transcription factor activity
J6625_05810	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
J6625_05820	COG0583	DNA-binding transcription factor activity
J6625_05825	COG1028	Short-chain dehydrogenase reductase Sdr
J6625_05830	COG0616	signal peptide processing
J6625_05835	COG3724	N-succinylarginine dihydrolase activity
J6625_05855	COG0840	transmembrane signaling receptor activity
J6625_05865	COG2971	BadF BadG BcrA BcrD
J6625_05875	COG4608	Belongs to the ABC transporter superfamily
J6625_05880	COG0444	Belongs to the ABC transporter superfamily
J6625_05885	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J6625_05900	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
J6625_05905	COG3039	Transposase
J6625_05910	COG3328	transposase activity
J6625_05915	COG5001	Diguanylate cyclase
J6625_05915	COG3447	MASE1 domain protein
J6625_05915	COG5002	protein histidine kinase activity
J6625_06010	COG0789	Transcriptional regulator
J6625_06020	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
J6625_06050	COG0789	Transcriptional regulator
J6625_06065	COG5642	Protein of unknown function (DUF2384)
J6625_06070	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
J6625_06080	COG2194	sulfuric ester hydrolase activity
J6625_06115	COG4584	PFAM Integrase catalytic
J6625_06120	COG1484	DNA-dependent DNA replication
J6625_06200	COG0640	Transcriptional regulator
J6625_06205	COG0798	PFAM Bile acid sodium symporter
J6625_06210	COG1393	Belongs to the ArsC family
J6625_06220	COG1677	Flagellar hook-basal body complex protein FliE
J6625_06230	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
J6625_06285	COG1684	flagellar biosynthetic protein fliR
J6625_06295	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
J6625_06320	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
J6625_06325	COG0784	Response regulator, receiver
J6625_06325	COG2198	Histidine kinase
J6625_06325	COG0643	Histidine kinase
J6625_06335	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
J6625_06340	COG1360	Flagellar Motor Protein
J6625_06345	COG1192	Involved in chromosome partitioning
J6625_06355	COG0835	chemotaxis
J6625_06370	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
J6625_06375	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
J6625_06380	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
J6625_06385	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
J6625_06390	COG1138	Cytochrome C-type biogenesis protein
J6625_06395	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J6625_06405	COG0457	Tetratricopeptide repeat
J6625_06420	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
J6625_06425	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
J6625_06425	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
J6625_06440	COG0259	pyridoxamine-phosphate oxidase activity
J6625_06470	COG3153	acetyltransferase
J6625_06485	COG0800	Aldolase
J6625_06490	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
J6625_06500	COG2721	sulfolactate sulfo-lyase activity
J6625_06505	COG0246	Mannitol dehydrogenase
J6625_06570	COG3039	Transposase
J6625_06595	COG2916	Histone family protein nucleoid-structuring protein H-NS
J6625_06600	COG1484	DNA-dependent DNA replication
J6625_06605	COG4584	PFAM Integrase catalytic
J6625_06625	COG5642	Protein of unknown function (DUF2384)
J6625_06630	COG2850	peptidyl-arginine hydroxylation
J6625_06665	COG1484	DNA-dependent DNA replication
J6625_06710	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
J6625_06715	COG2867	negative regulation of translational initiation
J6625_06720	COG2914	Belongs to the UPF0125 (RnfH) family
J6625_06725	COG0702	epimerase
J6625_06730	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
J6625_06735	COG1454	alcohol dehydrogenase
J6625_06745	COG0564	pseudouridine synthase activity
J6625_06750	COG1957	nucleoside hydrolase
J6625_06775	COG1280	lysine exporter protein (LysE YggA)
J6625_06785	COG3263	regulation of cellular component size
J6625_06795	COG1876	peptidase activity
J6625_06800	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
J6625_06805	COG1393	Belongs to the ArsC family
J6625_06815	COG3069	C4-dicarboxylate transmembrane transporter activity
J6625_06820	COG1473	amidohydrolase
J6625_06830	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
J6625_06835	COG0017	Asparaginyl-tRNA synthetase
J6625_06855	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
J6625_06860	COG0156	8-amino-7-oxononanoate synthase activity
J6625_06865	COG2226	methyltransferase
J6625_06865	COG1073	alpha beta
J6625_06870	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
J6625_06875	COG0501	Belongs to the peptidase M48B family
J6625_06880	COG0633	Ferredoxin
J6625_06880	COG0633	Ferredoxin
J6625_06880	COG3217	Mosc domain protein beta barrel domain protein
J6625_06880	COG3217	Mosc domain protein beta barrel domain protein
J6625_06890	COG0674	pyruvate-flavodoxin oxidoreductase activity
J6625_06890	COG1013	pyruvate-flavodoxin oxidoreductase activity
J6625_06890	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
J6625_06890	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
J6625_06895	COG2841	Protein conserved in bacteria
J6625_06905	COG0534	Mate efflux family protein
J6625_06930	COG1454	alcohol dehydrogenase
J6625_06940	COG1309	transcriptional regulator
J6625_06955	COG0791	NLP P60 protein
J6625_06960	COG0583	DNA-binding transcription factor activity
J6625_06980	COG0500	methyltransferase
J6625_06985	COG4106	trans-aconitate 2-methyltransferase activity
J6625_06990	COG1801	Protein of unknown function DUF72
J6625_06995	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
J6625_07000	COG0217	transcriptional regulatory protein
J6625_07005	COG2194	sulfuric ester hydrolase activity
J6625_07010	COG1846	Transcriptional regulator
J6625_07010	COG1940	carbohydrate kinase activity
J6625_07015	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
J6625_07020	COG0363	glucosamine-6-phosphate deaminase activity
J6625_07025	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J6625_07025	COG2190	(PTS) system
J6625_07025	COG1263	PTS System
J6625_07035	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
J6625_07040	COG0735	belongs to the Fur family
J6625_07050	COG0716	FMN binding
J6625_07065	COG0596	Alpha beta hydrolase
J6625_07070	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
J6625_07075	COG0033	Phosphoglucomutase
J6625_07085	COG1846	Transcriptional regulator
J6625_07090	COG2951	lytic endotransglycosylase activity
J6625_07095	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
J6625_07100	COG4136	ATPase activity
J6625_07110	COG4134	Bacterial extracellular solute-binding protein
J6625_07115	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
J6625_07120	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
J6625_07130	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
J6625_07140	COG0729	surface antigen
J6625_07145	COG2911	Protein conserved in bacteria
J6625_07165	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
J6625_07175	COG0741	lytic transglycosylase activity
J6625_07190	COG1607	acyl-coa hydrolase
J6625_07205	COG0741	lytic transglycosylase activity
J6625_07205	COG1388	LysM domain
J6625_07210	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J6625_07215	COG2226	methyltransferase
J6625_07220	COG0328	RNA-DNA hybrid ribonuclease activity
J6625_07225	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
J6625_07240	COG1960	acyl-CoA dehydrogenase activity
J6625_07245	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
J6625_07250	COG0121	glutamine amidotransferase
J6625_07260	COG0391	Required for morphogenesis under gluconeogenic growth conditions
J6625_07285	COG2197	response regulator
J6625_07290	COG3850	Histidine kinase
J6625_07295	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
J6625_07310	COG0243	molybdopterin cofactor binding
J6625_07315	COG0437	4 iron, 4 sulfur cluster binding
J6625_07320	COG0348	domain, Protein
J6625_07330	COG3005	denitrification pathway
J6625_07335	COG0521	Mo-molybdopterin cofactor biosynthetic process
J6625_07340	COG0315	cyclic pyranopterin monophosphate synthase activity
J6625_07345	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
J6625_07350	COG0314	molybdopterin synthase activity
J6625_07365	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
J6625_07370	COG2267	carboxylic ester hydrolase activity
J6625_07375	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
J6625_07385	COG0302	gtp cyclohydrolase
J6625_07390	COG0840	transmembrane signaling receptor activity
J6625_07395	COG2759	Belongs to the formate--tetrahydrofolate ligase family
J6625_07405	COG0583	DNA-binding transcription factor activity
J6625_07420	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
J6625_07435	COG2195	Cleaves the N-terminal amino acid of tripeptides
J6625_07440	COG1166	arginine decarboxylase activity
J6625_07500	COG2801	Transposase and inactivated derivatives
J6625_07510	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
J6625_07515	COG1187	pseudouridine synthase activity
J6625_07520	COG2807	transmembrane transport
J6625_07530	COG0583	DNA-binding transcription factor activity
J6625_07545	COG1607	acyl-coa hydrolase
J6625_07550	COG2979	Protein of unknown function (DUF533)
J6625_07565	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J6625_07570	COG1271	oxidase subunit
J6625_07575	COG1294	oxidase, subunit
J6625_07585	COG2814	Major facilitator Superfamily
J6625_07590	COG0656	L-ascorbic acid biosynthetic process
J6625_07610	COG0583	DNA-binding transcription factor activity
J6625_07615	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
J6625_07620	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
J6625_07625	COG2271	Major facilitator Superfamily
J6625_07630	COG1349	DNA-binding transcription factor activity
J6625_07640	COG0584	glycerophosphoryl diester phosphodiesterase
J6625_07645	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
J6625_07650	COG0287	Prephenate dehydrogenase
J6625_07650	COG1605	Chorismate mutase
J6625_07660	COG3085	chromosome segregation
J6625_07665	COG4574	serine-type endopeptidase inhibitor activity
J6625_07685	COG1770	oligopeptidase
J6625_07690	COG4771	TonB-dependent receptor
J6625_07695	COG3083	sulfuric ester hydrolase activity
J6625_07700	COG3082	Protein of unknown function (DUF1414)
J6625_07705	COG3081	Nucleoid-associated protein
J6625_07715	COG1175	transmembrane transport
J6625_07720	COG3833	ABC-type maltose transport systems, permease component
J6625_07725	COG3842	ATPase activity
J6625_07755	COG0425	Belongs to the sulfur carrier protein TusA family
J6625_07760	COG4783	chaperone-mediated protein folding
J6625_07770	COG1393	Belongs to the ArsC family
J6625_07795	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J6625_07800	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
J6625_07805	COG2431	L-lysine efflux transmembrane transporter activity
J6625_07815	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J6625_07825	COG4160	amino acid transport
J6625_07840	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
J6625_07850	COG0446	pyridine nucleotide-disulphide oxidoreductase
J6625_07855	COG0628	permease
J6625_07860	COG2373	Large extracellular alpha-helical protein
J6625_07865	COG4953	penicillin-binding protein 1C
J6625_07875	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J6625_07875	COG0301	tRNA thio-modification
J6625_07890	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
J6625_07895	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
J6625_07900	COG1334	flagellar protein FlaG
J6625_07930	COG2089	acid synthase
J6625_07945	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
J6625_07950	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
J6625_07960	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
J6625_07965	COG1086	Polysaccharide biosynthesis protein
J6625_07970	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J6625_07980	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
J6625_08000	COG0346	lactoylglutathione lyase activity
J6625_08005	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
J6625_08010	COG4660	Part of a membrane complex involved in electron transport
J6625_08015	COG4659	FMN binding
J6625_08020	COG4658	electron transport chain
J6625_08030	COG2878	Part of a membrane complex involved in electron transport
J6625_08035	COG4657	Part of a membrane complex involved in electron transport
J6625_08040	COG0675	Transposase, IS605 OrfB family
J6625_08050	COG0697	spore germination
J6625_08070	COG2932	Transcriptional regulator
J6625_08140	COG5566	PFAM Mor transcription activator
J6625_08180	COG0640	Transcriptional regulator
J6625_08190	COG4373	Mu-like prophage FluMu protein gp28
J6625_08195	COG4383	Mu-like prophage protein gp29
J6625_08230	COG4388	Caudovirus prohead serine protease
J6625_08235	COG4397	Mu-like prophage major head subunit gpT
J6625_08310	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
J6625_08320	COG0436	Aminotransferase
J6625_08330	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
J6625_08335	COG2027	D-alanyl-D-alanine carboxypeptidase
J6625_08340	COG1061	Type III restriction enzyme res subunit
J6625_08345	COG1566	PFAM secretion protein HlyD family protein
J6625_08355	COG3264	Mechanosensitive ion channel
J6625_08355	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
J6625_08360	COG1966	Carbon starvation protein
J6625_08365	COG3279	Response regulator of the LytR AlgR family
J6625_08370	COG3275	phosphorelay sensor kinase activity
J6625_08380	COG1012	belongs to the aldehyde dehydrogenase family
J6625_08380	COG1454	alcohol dehydrogenase
J6625_08385	COG2095	MarC family integral membrane protein
J6625_08395	COG0601	transmembrane transport
J6625_08400	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J6625_08405	COG0444	Belongs to the ABC transporter superfamily
J6625_08415	COG0861	Integral membrane protein TerC family
J6625_08420	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
J6625_08430	COG1301	dicarboxylic acid transport
J6625_08450	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
J6625_08470	COG0537	adenosine 5'-monophosphoramidase activity
J6625_08505	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
J6625_08510	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
J6625_08525	COG2354	Protein conserved in bacteria
J6625_08530	COG1164	Oligoendopeptidase f
J6625_08535	COG1164	Oligoendopeptidase f
J6625_08540	COG3150	esterase
J6625_08545	COG1252	NADH dehydrogenase
J6625_08550	COG0393	Putative heavy-metal-binding
J6625_08555	COG1368	sulfuric ester hydrolase activity
J6625_08565	COG0527	aspartate kinase activity
J6625_08570	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
J6625_08570	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
J6625_08575	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
J6625_08600	COG0583	DNA-binding transcription factor activity
J6625_08605	COG1620	l-lactate permease
J6625_08610	COG0247	lactate metabolic process
J6625_08615	COG1139	Iron-sulfur cluster binding protein
J6625_08635	COG0577	efflux transmembrane transporter activity
J6625_08640	COG1136	(ABC) transporter
J6625_08660	COG2814	Major facilitator Superfamily
J6625_08685	COG0672	)-iron permease
J6625_08720	COG2308	Evidence 4 Homologs of previously reported genes of
J6625_08735	COG0659	secondary active sulfate transmembrane transporter activity
J6625_08755	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
J6625_08760	COG0326	Molecular chaperone. Has ATPase activity
J6625_08770	COG0563	adenylate kinase activity
J6625_08775	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
J6625_08780	COG3788	relative of glutathione S-transferase, MAPEG superfamily
J6625_08785	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
J6625_08790	COG0840	transmembrane signaling receptor activity
J6625_08805	COG5001	Diguanylate cyclase
J6625_08805	COG3300	MHYT domain
J6625_08830	COG1021	2,3-dihydroxybenzoate-AMP ligase
J6625_08835	COG3433	isochorismatase activity
J6625_08835	COG1535	isochorismatase
J6625_08840	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
J6625_08845	COG1028	Short-chain dehydrogenase reductase Sdr
J6625_08855	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
J6625_08870	COG1120	ATPase activity
J6625_08875	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J6625_08880	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J6625_08885	COG4771	TonB-dependent receptor
J6625_08925	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
J6625_08930	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
J6625_08935	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
J6625_08940	COG0861	Integral membrane protein TerC family
J6625_08955	COG1022	Amp-dependent synthetase and ligase
J6625_08960	COG0295	cytidine deaminase activity
J6625_08965	COG1346	cytolysis
J6625_08970	COG1380	Effector of murein hydrolase LrgA
J6625_08975	COG3345	alpha-galactosidase
J6625_08985	COG2925	Exonuclease
J6625_08990	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
J6625_08995	COG0392	lysyltransferase activity
J6625_08995	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
J6625_09010	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
J6625_09015	COG0436	Aminotransferase
J6625_09020	COG0583	DNA-binding transcription factor activity
J6625_09025	COG2160	L-arabinose isomerase activity
J6625_09035	COG1069	ribulokinase activity
J6625_09040	COG1879	ABC-type sugar transport system periplasmic component
J6625_09045	COG1129	ABC transporter
J6625_09050	COG1172	Belongs to the binding-protein-dependent transport system permease family
J6625_09060	COG0257	Belongs to the bacterial ribosomal protein bL36 family
J6625_09065	COG0254	rRNA binding
J6625_09080	COG1451	nucleotide metabolic process
J6625_09095	COG3069	C4-dicarboxylate transmembrane transporter activity
J6625_09105	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J6625_09105	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
J6625_09110	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
J6625_09130	COG2009	succinate dehydrogenase
J6625_09135	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
J6625_09150	COG0567	Dehydrogenase, E1 component
J6625_09155	COG0508	dehydrogenase complex catalyzes the overall conversion of
J6625_09160	COG0045	succinate-CoA ligase (ADP-forming) activity
J6625_09165	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
J6625_09175	COG4584	PFAM Integrase catalytic
J6625_09180	COG1484	DNA-dependent DNA replication
J6625_09205	COG2983	Belongs to the UPF0260 family
J6625_09210	COG1882	Formate acetyltransferase
J6625_09215	COG2116	formate transmembrane transporter activity
J6625_09220	COG1944	ATP diphosphatase activity
J6625_09230	COG2076	Multidrug Resistance protein
J6625_09235	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
J6625_09240	COG1278	Cold shock
J6625_09245	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
J6625_09250	COG0542	response to heat
J6625_09255	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
J6625_09260	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
J6625_09265	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
J6625_09270	COG3134	Outer membrane lipoprotein
J6625_09275	COG3706	GGDEF domain
J6625_09280	COG0492	ferredoxin-NADP+ reductase activity
J6625_09285	COG0686	Belongs to the AlaDH PNT family
J6625_09295	COG0531	amino acid
J6625_09295	COG1674	ftsk spoiiie
J6625_09300	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
J6625_09305	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
J6625_09310	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
J6625_09315	COG1286	toxin biosynthetic process
J6625_09320	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
J6625_09325	COG2723	6-phospho-beta-galactosidase activity
J6625_09330	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J6625_09330	COG1263	PTS System
J6625_09335	COG1609	Transcriptional regulator
J6625_09345	COG4172	Belongs to the ABC transporter superfamily
J6625_09355	COG4171	peptide transport system, permease
J6625_09370	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
J6625_09375	COG1842	Phage shock protein A
J6625_09390	COG3106	COG3106 Predicted ATPase
J6625_09395	COG3768	UPF0283 membrane protein
J6625_09405	COG2154	pterin-4-alpha-carbinolamine dehydratase
J6625_09425	COG2885	chlorophyll binding
J6625_09435	COG1570	exodeoxyribonuclease VII activity
J6625_09445	COG1874	Beta-galactosidase
J6625_09445	COG0366	Alpha amylase catalytic
J6625_09455	COG0517	IMP dehydrogenase activity
J6625_09455	COG0516	GMP reductase activity
J6625_09460	COG0518	GMP synthase (glutamine-hydrolyzing) activity
J6625_09460	COG0519	Catalyzes the synthesis of GMP from XMP
J6625_09500	COG1846	Transcriptional regulator
J6625_09520	COG2062	phosphohistidine phosphatase, SixA
J6625_09530	COG0697	spore germination
J6625_09545	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
J6625_09550	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
J6625_09560	COG4591	ABC-type transport system involved in lipoprotein release permease component
J6625_09565	COG1136	(ABC) transporter
J6625_09570	COG4591	ABC-type transport system involved in lipoprotein release permease component
J6625_09575	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
J6625_09585	COG0544	peptidyl-prolyl cis-trans isomerase activity
J6625_09590	COG0740	serine-type endopeptidase activity
J6625_09595	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
J6625_09600	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
J6625_09605	COG0776	regulation of translation
J6625_09610	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
J6625_09615	COG0488	(ABC) transporter
J6625_09620	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
J6625_09625	COG3162	membrane
J6625_09640	COG1024	Enoyl-CoA hydratase
J6625_09645	COG1115	amino acid carrier protein
J6625_09655	COG3228	Belongs to the MtfA family
J6625_09660	COG1584	GPR1 FUN34 yaaH family protein
J6625_09685	COG1024	Enoyl-CoA hydratase
J6625_09690	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
J6625_09695	COG1960	acyl-CoA dehydrogenase activity
J6625_09705	COG1960	acyl-CoA dehydrogenase activity
J6625_09710	COG1024	Enoyl-CoA hydratase
J6625_09715	COG1024	Enoyl-CoA hydratase
J6625_09725	COG1028	Short-chain dehydrogenase reductase Sdr
J6625_09735	COG0730	response to heat
J6625_09755	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
J6625_09795	COG2003	Belongs to the UPF0758 family
J6625_09815	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
J6625_09840	COG1172	Belongs to the binding-protein-dependent transport system permease family
J6625_09845	COG1172	Belongs to the binding-protein-dependent transport system permease family
J6625_09850	COG1129	ABC transporter
J6625_09855	COG1879	ABC-type sugar transport system periplasmic component
J6625_09860	COG0583	DNA-binding transcription factor activity
J6625_09875	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
J6625_09880	COG0243	molybdopterin cofactor binding
J6625_09890	COG0583	DNA-binding transcription factor activity
J6625_09895	COG2723	6-phospho-beta-galactosidase activity
J6625_09905	COG0583	DNA-binding transcription factor activity
J6625_09920	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
J6625_09925	COG0673	inositol 2-dehydrogenase activity
J6625_09930	COG0583	DNA-binding transcription factor activity
J6625_09940	COG1560	Kdo2-lipid A biosynthetic process
J6625_09945	COG1560	Kdo2-lipid A biosynthetic process
J6625_09960	COG0417	DNA replication proofreading
J6625_09990	COG0534	Mate efflux family protein
J6625_10000	COG0307	riboflavin synthase, alpha
J6625_10015	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
J6625_10020	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
J6625_10025	COG0697	spore germination
J6625_10030	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
J6625_10060	COG0675	Transposase, IS605 OrfB family
J6625_10065	COG2996	Protein conserved in bacteria
J6625_10080	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J6625_10085	COG3099	Belongs to the UPF0263 family
J6625_10090	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
J6625_10095	COG2894	cell division
J6625_10100	COG0850	regulation of cytokinetic process
J6625_10105	COG3100	YcgL domain-containing protein
J6625_10110	COG2951	lytic endotransglycosylase activity
J6625_10115	COG1760	l-serine dehydratase
J6625_10120	COG1760	l-serine dehydratase
J6625_10125	COG3123	guanosine phosphorylase activity
J6625_10130	COG1301	dicarboxylic acid transport
J6625_10145	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
J6625_10150	COG2067	long-chain fatty acid transport protein
J6625_10155	COG2067	long-chain fatty acid transport protein
J6625_10165	COG1595	DNA-templated transcription, initiation
J6625_10195	COG0714	Associated with various cellular activities
J6625_10200	COG0183	Belongs to the thiolase family
J6625_10205	COG1024	Enoyl-CoA hydratase
J6625_10205	COG1250	3-hydroxyacyl-CoA dehydrogenase
J6625_10215	COG4681	YaeQ
J6625_10235	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J6625_10255	COG3134	Outer membrane lipoprotein
J6625_10260	COG0318	PFAM AMP-dependent synthetase and ligase
J6625_10290	COG0140	phosphoribosyl-ATP diphosphatase activity
J6625_10290	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
J6625_10295	COG0107	imidazoleglycerol-phosphate synthase activity
J6625_10300	COG0784	Response regulator, receiver
J6625_10300	COG2198	Histidine kinase
J6625_10300	COG2205	protein histidine kinase activity
J6625_10305	COG2199	diguanylate cyclase activity
J6625_10310	COG3437	response regulator, receiver
J6625_10315	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
J6625_10320	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
J6625_10325	COG0131	Imidazoleglycerol-phosphate dehydratase
J6625_10325	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
J6625_10330	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
J6625_10335	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
J6625_10340	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
J6625_10350	COG1199	ATP-dependent helicase activity
J6625_10355	COG1214	PFAM Peptidase M22, glycoprotease
J6625_10365	COG0596	Alpha beta hydrolase
J6625_10370	COG0318	PFAM AMP-dependent synthetase and ligase
J6625_10385	COG0697	spore germination
J6625_10395	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
J6625_10400	COG2832	Protein of unknown function (DUF454)
J6625_10405	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
J6625_10415	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
J6625_10420	COG0583	DNA-binding transcription factor activity
J6625_10430	COG3314	Sporulation integral membrane protein YlbJ
J6625_10480	COG2197	response regulator
J6625_10485	COG0517	IMP dehydrogenase activity
J6625_10485	COG0617	tRNA 3'-terminal CCA addition
J6625_10485	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
J6625_10490	COG1643	Atp-dependent helicase
J6625_10500	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
J6625_10515	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J6625_10520	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
J6625_10525	COG0709	Synthesizes selenophosphate from selenide and ATP
J6625_10540	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
J6625_10545	COG0840	transmembrane signaling receptor activity
J6625_10550	COG1254	Belongs to the acylphosphatase family
J6625_10560	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J6625_10560	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J6625_10565	COG0489	protein tyrosine kinase activity
J6625_10570	COG0572	uridine kinase
J6625_10575	COG0717	Belongs to the dCTP deaminase family
J6625_10580	COG0306	phosphate transporter
J6625_10585	COG1530	ribonuclease E activity
J6625_10590	COG0564	pseudouridine synthase activity
J6625_10605	COG1399	metal-binding, possibly nucleic acid-binding protein
J6625_10610	COG0333	Belongs to the bacterial ribosomal protein bL32 family
J6625_10615	COG0416	fatty acid biosynthetic process
J6625_10620	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J6625_10630	COG1028	Short-chain dehydrogenase reductase Sdr
J6625_10635	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J6625_10640	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
J6625_10645	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J6625_10650	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
J6625_10655	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
J6625_10660	COG0470	DNA polymerase III
J6625_10665	COG0084	hydrolase, TatD family'
J6625_10705	COG4584	PFAM Integrase catalytic
J6625_10710	COG1484	DNA-dependent DNA replication
J6625_10750	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
J6625_10750	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
J6625_10755	COG3008	intermembrane lipid transfer
J6625_10760	COG2995	paraquat-inducible protein a
J6625_10770	COG3141	response to X-ray
J6625_10780	COG1067	ATP-dependent peptidase activity
J6625_10785	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
J6625_10800	COG0488	(ABC) transporter
J6625_10810	COG0116	Belongs to the methyltransferase superfamily
J6625_10810	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
J6625_10820	COG0167	dihydroorotate dehydrogenase activity
J6625_10825	COG2902	Dehydrogenase
J6625_10835	COG0308	aminopeptidase N
J6625_10845	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
J6625_10850	COG1956	GAF domain-containing protein
J6625_10865	COG3278	Belongs to the heme-copper respiratory oxidase family
J6625_10880	COG2010	Cytochrome c
J6625_10890	COG2217	Heavy metal translocating P-type atpase
J6625_10905	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
J6625_10910	COG0589	response to stress
J6625_10915	COG0037	tRNA processing
J6625_10930	COG0625	glutathione transferase activity
J6625_10935	COG1869	D-ribose catabolic process
J6625_10940	COG1129	ABC transporter
J6625_10945	COG1172	Belongs to the binding-protein-dependent transport system permease family
J6625_10950	COG1879	ABC-type sugar transport system periplasmic component
J6625_10955	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
J6625_10960	COG1609	Transcriptional regulator
J6625_10995	COG0776	regulation of translation
J6625_11000	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J6625_11000	COG0072	phenylalanine-tRNA ligase activity
J6625_11005	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
J6625_11010	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
J6625_11015	COG0291	Belongs to the bacterial ribosomal protein bL35 family
J6625_11020	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
J6625_11025	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
J6625_11060	COG0675	Transposase, IS605 OrfB family
J6625_11085	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
J6625_11095	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
J6625_11100	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
J6625_11105	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
J6625_11110	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
J6625_11115	COG3313	Fe-S protein
J6625_11120	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J6625_11120	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J6625_11120	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
J6625_11125	COG1105	Belongs to the carbohydrate kinase PfkB family
J6625_11130	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
J6625_11130	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
J6625_11135	COG1609	Transcriptional regulator
J6625_11140	COG0814	amino acid
J6625_11150	COG5654	RES domain protein
J6625_11155	COG0513	Belongs to the DEAD box helicase family
J6625_11165	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
J6625_11170	COG2890	protein-(glutamine-N5) methyltransferase activity
J6625_11175	COG2840	Smr protein MutS2
J6625_11210	COG2824	Alkylphosphonate utilization operon protein PhnA
J6625_11215	COG1280	lysine exporter protein (LysE YggA)
J6625_11255	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
J6625_11260	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
J6625_11265	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
J6625_11275	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
J6625_11280	COG1434	Gram-negative-bacterium-type cell wall biogenesis
J6625_11290	COG0205	6-phosphofructokinase activity
J6625_11295	COG1473	amidohydrolase
J6625_11300	COG1011	Hydrolase
J6625_11305	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
J6625_11350	COG3593	DNA synthesis involved in DNA repair
J6625_11365	COG0583	DNA-binding transcription factor activity
J6625_11370	COG0730	response to heat
J6625_11385	COG3148	PFAM DTW domain containing protein
J6625_11395	COG1181	Belongs to the D-alanine--D-alanine ligase family
J6625_11405	COG0386	Belongs to the glutathione peroxidase family
J6625_11410	COG0513	Belongs to the DEAD box helicase family
J6625_11445	COG2329	Antibiotic biosynthesis monooxygenase
J6625_11450	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
J6625_11480	COG2501	S4 domain
J6625_11500	COG1132	(ABC) transporter
J6625_11505	COG1132	(ABC) transporter
J6625_11515	COG3118	belongs to the thioredoxin family
J6625_11520	COG0471	metal ion transport
J6625_11530	COG0058	SHG alpha-glucan phosphorylase activity
J6625_11560	COG0814	amino acid
J6625_11565	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
J6625_11570	COG0514	ATP-dependent DNA helicase (RecQ)
J6625_11575	COG2766	serine protein kinase
J6625_11580	COG2718	Belongs to the UPF0229 family
J6625_11585	COG2719	SpoVR family
J6625_11595	COG2186	Transcriptional regulator
J6625_11600	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
J6625_11605	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
J6625_11610	COG0586	Pfam SNARE associated Golgi protein
J6625_11620	COG0556	nucleotide-excision repair
J6625_11630	COG0569	domain protein
J6625_11630	COG2985	domain, Protein
J6625_11635	COG0739	heme binding
J6625_11635	COG1196	nuclear chromosome segregation
J6625_11635	COG0741	lytic transglycosylase activity
J6625_11640	COG3181	Tripartite tricarboxylate transporter family receptor
J6625_11655	COG4565	transcriptional regulatory protein
J6625_11660	COG3290	protein histidine kinase activity
J6625_11665	COG1846	Transcriptional regulator
J6625_11665	COG1940	carbohydrate kinase activity
J6625_11670	COG0840	transmembrane signaling receptor activity
J6625_11675	COG3012	SEC-C Motif Domain Protein
J6625_11680	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
J6625_11685	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
J6625_11690	COG0247	lactate metabolic process
J6625_11710	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
J6625_11715	COG0437	4 iron, 4 sulfur cluster binding
J6625_11720	COG3301	Polysulphide reductase, NrfD
J6625_11725	COG1138	Cytochrome C-type biogenesis protein
J6625_11730	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J6625_11735	COG4235	cytochrome complex assembly
J6625_11735	COG3088	subunit of a heme lyase
J6625_11750	COG3046	protein related to deoxyribodipyrimidine photolyase
J6625_11755	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J6625_11760	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
J6625_11760	COG0617	tRNA 3'-terminal CCA addition
J6625_11760	COG0517	IMP dehydrogenase activity
J6625_11770	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
J6625_11775	COG0583	DNA-binding transcription factor activity
J6625_11785	COG4774	siderophore transport
J6625_11790	COG2203	Gaf domain
J6625_11790	COG2199	diguanylate cyclase activity
J6625_11795	COG2200	EAL domain
J6625_11800	COG1917	Cupin 2, conserved barrel domain protein
J6625_11800	COG4977	sequence-specific DNA binding
J6625_11805	COG0583	DNA-binding transcription factor activity
J6625_11810	COG2910	NAD(P)H-binding
J6625_11820	COG0626	cystathionine gamma-synthase activity
J6625_11825	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
J6625_11910	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J6625_11915	COG0501	Belongs to the peptidase M48B family
J6625_11945	COG0542	response to heat
J6625_11950	COG0071	Belongs to the small heat shock protein (HSP20) family
J6625_12035	COG1484	DNA-dependent DNA replication
J6625_12040	COG4584	PFAM Integrase catalytic
J6625_12075	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
J6625_12100	COG1397	ADP-ribosylglycohydrolase
J6625_12105	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
J6625_12110	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
J6625_12115	COG0629	single-stranded DNA binding
J6625_12220	COG2197	response regulator
J6625_12235	COG3039	Transposase
J6625_12255	COG3328	transposase activity
J6625_12320	COG3550	peptidyl-serine autophosphorylation
J6625_12330	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
J6625_12345	COG2723	6-phospho-beta-galactosidase activity
J6625_12350	COG1263	PTS System
J6625_12350	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J6625_12350	COG2190	(PTS) system
J6625_12355	COG1737	Transcriptional regulator
J6625_12375	COG1435	thymidine kinase activity
J6625_12380	COG1757	Na H antiporter
J6625_12385	COG2916	Histone family protein nucleoid-structuring protein H-NS
J6625_12390	COG2096	Adenosyltransferase
J6625_12395	COG3530	Putative quorum-sensing-regulated virulence factor
J6625_12400	COG0602	queuosine metabolic process
J6625_12405	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
J6625_12425	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
J6625_12435	COG0776	regulation of translation
J6625_12440	COG0539	negative regulation of cytoplasmic translation
J6625_12445	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
J6625_12450	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
J6625_12485	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
J6625_12490	COG3300	MHYT domain
J6625_12490	COG5001	Diguanylate cyclase
J6625_12500	COG0583	DNA-binding transcription factor activity
J6625_12505	COG0745	RESPONSE REGULATOR receiver
J6625_12530	COG4989	oxidoreductase activity
J6625_12535	COG0724	RNA recognition motif
J6625_12545	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
J6625_12555	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
J6625_12575	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
J6625_12580	COG1360	Flagellar Motor Protein
J6625_12585	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J6625_12590	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J6625_12595	COG0649	NAD binding
J6625_12595	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J6625_12610	COG1034	ATP synthesis coupled electron transport
J6625_12615	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
J6625_12620	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J6625_12625	COG0839	Belongs to the complex I subunit 6 family
J6625_12630	COG0713	ATP synthesis coupled electron transport
J6625_12640	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J6625_12645	COG1007	ATP synthesis coupled electron transport
J6625_12655	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
J6625_12655	COG0047	phosphoribosylformylglycinamidine synthase activity
J6625_12660	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
J6625_12675	COG1645	bacterial-type flagellum-dependent swarming motility
J6625_12680	COG1160	GTP binding
J6625_12685	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
J6625_12690	COG2976	Protein conserved in bacteria
J6625_12695	COG0124	histidyl-tRNA synthetase
J6625_12705	COG1426	Protein conserved in bacteria
J6625_12715	COG0820	rRNA (adenine-C2-)-methyltransferase activity
J6625_12720	COG0105	UTP biosynthetic process
J6625_12735	COG0633	Ferredoxin
J6625_12740	COG0443	Heat shock 70 kDa protein
J6625_12745	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
J6625_12755	COG0822	iron-sulfur transferase activity
J6625_12760	COG1104	cysteine desulfurase activity
J6625_12775	COG3154	lipid carrier protein
J6625_12780	COG0826	peptidase U32
J6625_12785	COG0826	peptidase U32
J6625_12795	COG2897	thiosulfate sulfurtransferase activity
J6625_12800	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
J6625_12805	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
J6625_12810	COG1862	Preprotein translocase
J6625_12815	COG0343	queuine tRNA-ribosyltransferase activity
J6625_12820	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
J6625_12825	COG0517	IMP dehydrogenase activity
J6625_12830	COG0450	alkyl hydroperoxide reductase
J6625_12835	COG3634	alkyl hydroperoxide reductase activity
J6625_12865	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
J6625_12865	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
J6625_12870	COG0509	glycine decarboxylation via glycine cleavage system
J6625_12875	COG0404	The glycine cleavage system catalyzes the degradation of glycine
J6625_12880	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
J6625_12885	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
J6625_12905	COG2814	Major facilitator Superfamily
J6625_12910	COG0444	Belongs to the ABC transporter superfamily
J6625_12915	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J6625_12920	COG0601	transmembrane transport
J6625_12930	COG0625	glutathione transferase activity
J6625_12935	COG0625	glutathione transferase activity
J6625_12945	COG0483	inositol monophosphate 1-phosphatase activity
J6625_12960	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
J6625_12965	COG2056	Na+-H+ antiporter family
J6625_12970	COG2814	Major facilitator Superfamily
J6625_12975	COG0583	DNA-binding transcription factor activity
J6625_12980	COG5001	Diguanylate cyclase
J6625_12995	COG2050	protein possibly involved in aromatic compounds catabolism
J6625_13005	COG0247	lactate metabolic process
J6625_13005	COG0277	FAD linked oxidase domain protein
J6625_13020	COG1253	flavin adenine dinucleotide binding
J6625_13025	COG1902	pentaerythritol trinitrate reductase activity
J6625_13035	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
J6625_13040	COG0647	UMP catabolic process
J6625_13050	COG0367	asparagine synthase
J6625_13065	COG0625	glutathione transferase activity
J6625_13075	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
J6625_13090	COG0564	pseudouridine synthase activity
J6625_13095	COG5001	Diguanylate cyclase
J6625_13105	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
J6625_13140	COG0670	Belongs to the BI1 family
J6625_13145	COG1289	transmembrane transporter activity
J6625_13150	COG2920	part of a sulfur-relay system
J6625_13155	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
J6625_13160	COG0285	dihydrofolate synthase activity
J6625_13165	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
J6625_13170	COG0101	tRNA pseudouridine synthase activity
J6625_13180	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
J6625_13185	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
J6625_13190	COG0671	phosphoesterase, PA-phosphatase related
J6625_13195	COG1464	Belongs to the NlpA lipoprotein family
J6625_13220	COG1119	ATPase activity
J6625_13225	COG0574	Belongs to the PEP-utilizing enzyme family
J6625_13225	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
J6625_13230	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
J6625_13240	COG1113	amino acid transport
J6625_13285	COG1242	4 iron, 4 sulfur cluster binding
J6625_13290	COG0070	glutamate synthase
J6625_13290	COG0069	glutamate synthase activity
J6625_13290	COG0067	glutamate synthase
J6625_13295	COG0493	'glutamate synthase
J6625_13300	COG1126	abc transporter atp-binding protein
J6625_13305	COG0765	amino acid transport
J6625_13310	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J6625_13335	COG4104	PAAR repeat-containing protein
J6625_13345	COG0513	Belongs to the DEAD box helicase family
J6625_13375	COG3706	GGDEF domain
J6625_13380	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
J6625_13390	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
J6625_13395	COG0505	Belongs to the CarA family
J6625_13400	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
J6625_13410	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
J6625_13415	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
J6625_13420	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
J6625_13425	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
J6625_13430	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
J6625_13435	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
J6625_13440	COG4139	cobalamin transport
J6625_13465	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
J6625_13475	COG0023	Translation Initiation Factor
J6625_13480	COG2119	membrane
J6625_13515	COG2199	diguanylate cyclase activity
J6625_13515	COG2203	Gaf domain
J6625_13530	COG2801	Transposase and inactivated derivatives
J6625_13545	COG0215	cysteine-tRNA ligase activity
J6625_13550	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
J6625_13560	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
J6625_13565	COG2261	transglycosylase associated protein
J6625_13570	COG1309	transcriptional regulator
J6625_13575	COG0604	alcohol dehydrogenase
J6625_13590	COG0583	DNA-binding transcription factor activity
J6625_13615	COG0322	excinuclease ABC activity
J6625_13620	COG2197	response regulator
J6625_13625	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
J6625_13630	COG2835	tetraacyldisaccharide 4'-kinase activity
J6625_13635	COG1663	tetraacyldisaccharide 4'-kinase activity
J6625_13640	COG1132	(ABC) transporter
J6625_13645	COG0658	competence protein
J6625_13645	COG2333	competence protein COMEC
J6625_13660	COG0433	COG0433 Predicted ATPase
J6625_13665	COG1448	Aminotransferase
J6625_13680	COG1199	ATP-dependent helicase activity
J6625_13690	COG0123	including yeast histone deacetylase and acetoin utilization protein
J6625_13695	COG0477	Major facilitator Superfamily
J6625_13700	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
J6625_13705	COG1785	Belongs to the alkaline phosphatase family
J6625_13725	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
J6625_13730	COG3706	GGDEF domain
J6625_13735	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J6625_13740	COG0765	amino acid transport
J6625_13745	COG1126	abc transporter atp-binding protein
J6625_13760	COG0531	amino acid
J6625_13775	COG1253	flavin adenine dinucleotide binding
J6625_13780	COG0704	Plays a role in the regulation of phosphate uptake
J6625_13785	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
J6625_13790	COG0581	inorganic phosphate transmembrane transporter activity
J6625_13795	COG0573	inorganic phosphate transmembrane transporter activity
J6625_13800	COG0590	tRNA wobble adenosine to inosine editing
J6625_13815	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
J6625_13835	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
J6625_13840	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
J6625_13845	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
J6625_13850	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
J6625_13875	COG2716	regulation of RNA biosynthetic process
J6625_13880	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
J6625_13890	COG2239	Acts as a magnesium transporter
J6625_13905	COG3951	Flagellar rod assembly protein muramidase FlgJ
J6625_13905	COG1705	Flagellar rod assembly protein muramidase FlgJ
J6625_13910	COG1706	bacterial-type flagellum-dependent cell motility
J6625_13915	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
J6625_13930	COG1749	Flagellar hook protein flgE
J6625_13945	COG1815	bacterial-type flagellum-dependent cell motility
J6625_13950	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
J6625_13955	COG0835	chemotaxis
J6625_13955	COG0784	Response regulator, receiver
J6625_13960	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
J6625_13975	COG0622	Phosphoesterase
J6625_13980	COG4166	transmembrane transport
J6625_13995	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
J6625_14000	COG0675	Transposase, IS605 OrfB family
J6625_14010	COG0697	spore germination
J6625_14015	COG4166	transmembrane transport
J6625_14040	COG1278	Cold shock
J6625_14080	COG3132	Protein of unknown function, DUF480
J6625_14095	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
J6625_14105	COG1091	dTDP-4-dehydrorhamnose reductase activity
J6625_14110	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
J6625_14150	COG0110	maltose O-acetyltransferase activity
J6625_14170	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
J6625_14195	COG1737	Transcriptional regulator
J6625_14200	COG0469	pyruvate kinase activity
J6625_14210	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
J6625_14215	COG1960	acyl-CoA dehydrogenase activity
J6625_14225	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
J6625_14245	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
J6625_14250	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
J6625_14255	COG1309	transcriptional regulator
J6625_14270	COG1946	Acyl-CoA thioesterase
J6625_14280	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
J6625_14290	COG0009	L-threonylcarbamoyladenylate synthase
J6625_14295	COG0613	PHP domain protein
J6625_14300	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
J6625_14310	COG0512	Glutamine amidotransferase of anthranilate synthase
J6625_14310	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
J6625_14315	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
J6625_14320	COG0135	phosphoribosylanthranilate isomerase activity
J6625_14320	COG0134	indole-3-glycerol-phosphate synthase activity
J6625_14325	COG0133	tryptophan synthase activity
J6625_14330	COG0159	tryptophan synthase activity
J6625_14390	COG5507	3-demethylubiquinone-9 3-methyltransferase
J6625_14395	COG2814	Major facilitator Superfamily
J6625_14400	COG0109	protoheme IX farnesyltransferase activity
J6625_14405	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
J6625_14410	COG1845	cytochrome c oxidase, subunit III
J6625_14415	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
J6625_14420	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
J6625_14425	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
J6625_14430	COG0583	DNA-binding transcription factor activity
J6625_14450	COG1846	Transcriptional regulator
J6625_14465	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
J6625_14480	COG0745	RESPONSE REGULATOR receiver
J6625_14490	COG0708	Exodeoxyribonuclease III
J6625_14500	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
J6625_14505	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
J6625_14520	COG0095	Lipoate-protein ligase
J6625_14550	COG0640	Transcriptional regulator
J6625_14560	COG0446	pyridine nucleotide-disulphide oxidoreductase
J6625_14570	COG1285	pathogenesis
J6625_14600	COG0484	heat shock protein binding
J6625_14605	COG0443	Heat shock 70 kDa protein
J6625_14610	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
J6625_14615	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
J6625_14620	COG3706	GGDEF domain
J6625_14625	COG0497	DNA recombination
J6625_14635	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
J6625_14640	COG0577	efflux transmembrane transporter activity
J6625_14640	COG1136	(ABC) transporter
J6625_14645	COG1538	Outer membrane efflux protein
J6625_14650	COG2375	cellular response to nickel ion
J6625_14655	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
J6625_14660	COG2916	Histone family protein nucleoid-structuring protein H-NS
J6625_14665	COG0583	DNA-binding transcription factor activity
J6625_14670	COG3048	D-serine ammonia-lyase activity
J6625_14680	COG0538	isocitrate dehydrogenase activity
J6625_14715	COG0789	Transcriptional regulator
J6625_14720	COG0456	acetyltransferase
J6625_14725	COG1187	pseudouridine synthase activity
J6625_14735	COG0482	sulfurtransferase activity
J6625_14740	COG2915	High frequency lysogenization protein hflD homolog
J6625_14745	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
J6625_14750	COG2850	peptidyl-arginine hydroxylation
J6625_14760	COG1196	nuclear chromosome segregation
J6625_14760	COG3264	Mechanosensitive ion channel
J6625_14790	COG0281	malic enzyme
J6625_14795	COG0746	molybdenum cofactor guanylyltransferase activity
J6625_14800	COG1763	Mo-molybdopterin cofactor biosynthetic process
J6625_14805	COG1289	transmembrane transporter activity
J6625_14810	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
J6625_14840	COG3220	belongs to the UPF0276 family
J6625_14850	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
J6625_14860	COG3039	Transposase
J6625_14875	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
J6625_14880	COG0083	homoserine kinase activity
J6625_14890	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
J6625_14900	COG3039	Transposase
J6625_14910	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
J6625_14925	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
J6625_14935	COG0745	RESPONSE REGULATOR receiver
J6625_14950	COG4988	ABC transporter
J6625_14955	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
J6625_14975	COG1720	tRNA m6t6A37 methyltransferase activity
J6625_14990	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
J6625_14995	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
J6625_15000	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
J6625_15010	COG2190	(PTS) system
J6625_15015	COG3038	cytochrome b561
J6625_15025	COG0420	3'-5' exonuclease activity
J6625_15030	COG1247	-acetyltransferase
J6625_15035	COG2974	May be involved in recombination
J6625_15045	COG0405	Gamma-glutamyltransferase
J6625_15050	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
J6625_15050	COG4651	solute:proton antiporter activity
J6625_15085	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J6625_15090	COG1396	sequence-specific DNA binding
J6625_15090	COG1917	Cupin 2, conserved barrel domain protein
J6625_15095	COG1012	belongs to the aldehyde dehydrogenase family
J6625_15110	COG0531	amino acid
J6625_15115	COG0531	amino acid
J6625_15125	COG1283	sodium-dependent phosphate transmembrane transporter activity
J6625_15135	COG3384	dioxygenase
J6625_15165	COG2205	protein histidine kinase activity
J6625_15165	COG0784	Response regulator, receiver
J6625_15170	COG4584	PFAM Integrase catalytic
J6625_15175	COG1484	DNA-dependent DNA replication
J6625_15180	COG0582	viral genome integration into host DNA
J6625_15190	COG3311	Transcriptional regulator
J6625_15240	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
J6625_15250	COG5377	YqaJ viral recombinase family
J6625_15275	COG2003	Belongs to the UPF0758 family
J6625_15310	COG0515	serine threonine protein kinase
J6625_15345	COG1388	LysM domain
J6625_15345	COG1376	ErfK ybiS ycfS ynhG family protein
J6625_15360	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
J6625_15365	COG0791	NLP P60 protein
J6625_15380	COG3118	belongs to the thioredoxin family
J6625_15390	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
J6625_15395	COG0788	formyltetrahydrofolate deformylase activity
J6625_15420	COG0739	heme binding
J6625_15420	COG0741	lytic transglycosylase activity
J6625_15420	COG1196	nuclear chromosome segregation
J6625_15430	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
J6625_15435	COG0673	inositol 2-dehydrogenase activity
J6625_15475	COG1032	radical SAM domain protein
J6625_15480	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
J6625_15490	COG3706	GGDEF domain
J6625_15495	COG1752	Esterase of the alpha-beta hydrolase superfamily
J6625_15500	COG0733	neurotransmitter:sodium symporter activity
J6625_15530	COG0281	malic enzyme
J6625_15535	COG2207	Transcriptional regulator
J6625_15540	COG0534	Mate efflux family protein
J6625_15555	COG2233	PERMEase
J6625_15560	COG0095	Lipoate-protein ligase
J6625_15565	COG1115	amino acid carrier protein
J6625_15570	COG0019	diaminopimelate decarboxylase activity
J6625_15580	COG0678	peroxiredoxin activity
J6625_15585	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
J6625_15595	COG1126	abc transporter atp-binding protein
J6625_15600	COG0765	amino acid transport
J6625_15605	COG4597	amino acid ABC transporter
J6625_15610	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J6625_15625	COG1131	(ABC) transporter
J6625_15630	COG0545	Peptidyl-prolyl cis-trans isomerase
J6625_15650	COG3142	Participates in the control of copper homeostasis
J6625_15655	COG1940	carbohydrate kinase activity
J6625_15665	COG4783	chaperone-mediated protein folding
J6625_15675	COG5002	protein histidine kinase activity
J6625_15680	COG0745	RESPONSE REGULATOR receiver
J6625_15685	COG0346	lactoylglutathione lyase activity
J6625_15690	COG3706	GGDEF domain
J6625_15695	COG3284	Transcriptional regulator
J6625_15710	COG0697	spore germination
J6625_15720	COG0667	Aldo Keto reductase
J6625_15735	COG3290	protein histidine kinase activity
J6625_15745	COG1566	PFAM secretion protein HlyD family protein
J6625_15770	COG0602	queuosine metabolic process
J6625_15775	COG1328	CTP reductase activity
J6625_15785	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
J6625_15790	COG3115	cell septum assembly
J6625_15795	COG1196	nuclear chromosome segregation
J6625_15805	COG2860	membrane
J6625_15815	COG3108	Peptidase M15
J6625_15820	COG2989	Protein conserved in bacteria
J6625_15835	COG0463	Glycosyl transferase, family 2
J6625_15850	COG0366	Alpha amylase catalytic
J6625_15890	COG3706	GGDEF domain
J6625_15895	COG0037	tRNA processing
J6625_15900	COG3590	peptidase
J6625_15910	COG0488	(ABC) transporter
J6625_15920	COG0531	amino acid
J6625_15925	COG0814	amino acid
J6625_15940	COG0825	malonyl-CoA metabolic process
J6625_15945	COG0587	DNA-directed DNA polymerase activity
J6625_15950	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
J6625_15955	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
J6625_15960	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
J6625_15965	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
J6625_15970	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
J6625_15985	COG0750	zinc metalloprotease
J6625_15990	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
J6625_15995	COG0575	Belongs to the CDS family
J6625_16000	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
J6625_16005	COG0233	cytoplasmic translational termination
J6625_16010	COG0528	UMP kinase activity
J6625_16015	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
J6625_16020	COG0052	Belongs to the universal ribosomal protein uS2 family
J6625_16025	COG0024	Methionine aminopeptidase
J6625_16030	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
J6625_16035	COG2171	N-acyltransferase activity
J6625_16045	COG1263	PTS System
J6625_16045	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J6625_16070	COG0564	pseudouridine synthase activity
J6625_16075	COG3098	single-species biofilm formation
J6625_16100	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
J6625_16110	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
J6625_16110	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
J6625_16125	COG1611	Belongs to the LOG family
J6625_16130	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J6625_16135	COG0473	3-isopropylmalate dehydrogenase activity
J6625_16145	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
J6625_16160	COG0583	DNA-binding transcription factor activity
J6625_16165	COG0840	transmembrane signaling receptor activity
J6625_16170	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
J6625_16185	COG1477	protein flavinylation
J6625_16190	COG2871	sodium ion transport
J6625_16195	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
J6625_16200	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
J6625_16205	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
J6625_16210	COG1805	sodium ion transport
J6625_16215	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
J6625_16220	COG0271	Belongs to the BolA IbaG family
J6625_16225	COG2813	Specifically methylates the guanine in position
J6625_16235	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
J6625_16245	COG2211	Major facilitator Superfamily
J6625_16255	COG1666	GTP binding
J6625_16270	COG0659	secondary active sulfate transmembrane transporter activity
J6625_16280	COG2205	protein histidine kinase activity
J6625_16285	COG0745	RESPONSE REGULATOR receiver
J6625_16290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
J6625_16295	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
J6625_16315	COG1609	Transcriptional regulator
J6625_16320	COG2182	Extracellular solute-binding protein
J6625_16325	COG0840	transmembrane signaling receptor activity
J6625_16330	COG1472	Belongs to the glycosyl hydrolase 3 family
J6625_16335	COG2273	Hydrolase Family 16
J6625_16335	COG5297	Belongs to the glycosyl hydrolase family 6
J6625_16340	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J6625_16350	COG2723	6-phospho-beta-galactosidase activity
J6625_16355	COG1447	Phosphotransferase system cellobiose-specific component IIA
J6625_16375	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
J6625_16385	COG1151	hydroxylamine reductase activity
J6625_16390	COG0783	Belongs to the Dps family
J6625_16415	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
J6625_16430	COG4221	oxidoreductase activity
J6625_16440	COG0415	Belongs to the DNA photolyase family
J6625_16445	COG0789	Transcriptional regulator
J6625_16450	COG3272	Protein of unknown function (DUF1722)
J6625_16475	COG1605	Chorismate mutase
J6625_16475	COG0077	Prephenate dehydratase
J6625_16505	COG2133	pyrroloquinoline quinone binding
J6625_16515	COG1349	DNA-binding transcription factor activity
J6625_16520	COG2084	Dehydrogenase
J6625_16525	COG3395	kinase activity
J6625_16530	COG0235	Class ii aldolase
J6625_16535	COG3622	Belongs to the hyi family
J6625_16540	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
J6625_16545	COG2610	gluconate transmembrane transporter activity
J6625_16565	COG0300	oxidoreductase activity
J6625_16590	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
J6625_16610	COG3813	Protein conserved in bacteria
J6625_16620	COG0826	peptidase U32
J6625_16625	COG1280	lysine exporter protein (LysE YggA)
J6625_16635	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J6625_16660	COG2199	diguanylate cyclase activity
J6625_16660	COG2203	Gaf domain
J6625_16660	COG2200	EAL domain
J6625_16705	COG1566	PFAM secretion protein HlyD family protein
J6625_16715	COG0114	fumarate hydratase activity
J6625_16725	COG0506	proline dehydrogenase activity
J6625_16725	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
J6625_16725	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
J6625_16730	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
J6625_16745	COG0737	Belongs to the 5'-nucleotidase family
J6625_16765	COG2204	response regulator
J6625_16770	COG0545	Peptidyl-prolyl cis-trans isomerase
J6625_16780	COG2900	Belongs to the SlyX family
J6625_16785	COG1047	Peptidyl-prolyl cis-trans
J6625_16790	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
J6625_16800	COG0835	chemotaxis
J6625_16800	COG0784	Response regulator, receiver
J6625_16805	COG0429	hydrolase of the alpha beta-hydrolase fold
J6625_16810	COG2203	Gaf domain
J6625_16810	COG3706	GGDEF domain
J6625_16810	COG4251	negative regulation of phosphorylation
J6625_16810	COG5001	Diguanylate cyclase
J6625_16815	COG3089	Belongs to the UPF0270 family
J6625_16820	COG3954	Phosphoribulokinase
J6625_16835	COG1765	OsmC-like protein
J6625_16845	COG2226	methyltransferase
J6625_16855	COG2202	Pas domain
J6625_16855	COG2205	protein histidine kinase activity
J6625_16860	COG2814	Major facilitator Superfamily
J6625_16885	COG0748	coenzyme F420 binding
J6625_16890	COG3721	Heme iron utilization protein
J6625_16900	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J6625_16925	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
J6625_16935	COG0463	Glycosyl transferase, family 2
J6625_16940	COG1196	nuclear chromosome segregation
J6625_16940	COG0739	heme binding
J6625_16940	COG0741	lytic transglycosylase activity
J6625_16945	COG0488	(ABC) transporter
J6625_16955	COG2252	PERMEase
J6625_16960	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
J6625_16965	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
J6625_16970	COG3178	'Phosphotransferase
J6625_16975	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
J6625_16985	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
J6625_16990	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
J6625_16995	COG2967	ApaG domain
J6625_17000	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
J6625_17010	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
J6625_17020	COG3314	Sporulation integral membrane protein YlbJ
J6625_17025	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
J6625_17030	COG0211	Belongs to the bacterial ribosomal protein bL27 family
J6625_17035	COG0261	This protein binds to 23S rRNA in the presence of protein L20
J6625_17040	COG0142	geranyltranstransferase activity
J6625_17050	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
J6625_17055	COG0330	HflC and HflK could
J6625_17060	COG0330	HflC and HflK could
J6625_17065	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
J6625_17070	COG1923	regulation of RNA biosynthetic process
J6625_17075	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
J6625_17080	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
J6625_17090	COG0802	atpase or kinase
J6625_17095	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
J6625_17095	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
J6625_17115	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
J6625_17120	COG2011	ABC-type metal ion transport system permease component
J6625_17125	COG1464	Belongs to the NlpA lipoprotein family
J6625_17145	COG2205	protein histidine kinase activity
J6625_17145	COG0784	Response regulator, receiver
J6625_17160	COG2198	Histidine kinase
J6625_17160	COG5002	protein histidine kinase activity
J6625_17160	COG0784	Response regulator, receiver
J6625_17180	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
J6625_17195	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
J6625_17200	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
J6625_17205	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
J6625_17210	COG2716	regulation of RNA biosynthetic process
J6625_17215	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
J6625_17220	COG3013	Belongs to the UPF0304 family
J6625_17230	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
J6625_17235	COG0857	belongs to the CobB CobQ family
J6625_17235	COG0280	phosphate acetyltransferase
J6625_17245	COG0440	acetolactate synthase activity
J6625_17250	COG0028	Belongs to the TPP enzyme family
J6625_17265	COG0671	phosphoesterase, PA-phosphatase related
J6625_17275	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
J6625_17280	COG0473	3-isopropylmalate dehydrogenase activity
J6625_17285	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
J6625_17290	COG0066	3-isopropylmalate dehydratase activity
J6625_17305	COG4143	(ABC) transporter
J6625_17310	COG1178	ABC-type Fe3 transport system permease component
J6625_17315	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
J6625_17330	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
J6625_17340	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
J6625_17375	COG0316	Belongs to the HesB IscA family
J6625_17385	COG0038	chloride channel
J6625_17390	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
J6625_17405	COG0671	phosphoesterase, PA-phosphatase related
J6625_17415	COG0583	DNA-binding transcription factor activity
J6625_17420	COG2076	Multidrug Resistance protein
J6625_17430	COG0346	lactoylglutathione lyase activity
J6625_17435	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J6625_17440	COG1643	Atp-dependent helicase
J6625_17450	COG1489	DNA binding
J6625_17455	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
J6625_17460	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
J6625_17470	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
J6625_17475	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
J6625_17480	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
J6625_17490	COG0842	Transport permease protein
J6625_17495	COG1131	(ABC) transporter
J6625_17510	COG0163	prenyltransferase activity
J6625_17515	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
J6625_17520	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
J6625_17535	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
J6625_17550	COG1136	(ABC) transporter
J6625_17585	COG2801	Transposase and inactivated derivatives
J6625_17590	COG0529	Catalyzes the synthesis of activated sulfate
J6625_17595	COG0471	metal ion transport
J6625_17595	COG3273	potassium ion transport
J6625_17600	COG2895	sulfate adenylyltransferase (ATP) activity
J6625_17605	COG0175	sulfate reduction
J6625_17610	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
J6625_17610	COG1648	precorrin-2 dehydrogenase activity
J6625_17615	COG0330	HflC and HflK could
J6625_17620	COG1585	Membrane protein implicated in regulation of membrane protease activity
J6625_17630	COG0673	inositol 2-dehydrogenase activity
J6625_17640	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
J6625_17645	COG0635	Involved in the biosynthesis of porphyrin-containing compound
J6625_17650	COG3036	rescue of stalled ribosome
J6625_17665	COG0138	bifunctional purine biosynthesis protein purh
J6625_17700	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
J6625_17705	COG0358	DNA primase activity
J6625_17710	COG1610	YqeY-like protein
J6625_17715	COG0828	Belongs to the bacterial ribosomal protein bS21 family
J6625_17720	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
J6625_17730	COG1388	LysM domain
J6625_17730	COG4942	peptidase
J6625_17735	COG1238	metal cluster binding
J6625_17740	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
J6625_17745	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
J6625_17750	COG0585	pseudouridine synthase activity
J6625_17760	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
J6625_17765	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
J6625_17770	COG0148	phosphopyruvate hydratase activity
J6625_17775	COG0504	CTP synthase activity
J6625_17780	COG3956	TIGRFAM MazG family protein
J6625_17785	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
J6625_17790	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
J6625_17800	COG4807	Protein conserved in bacteria
J6625_17805	COG3023	N-Acetylmuramoyl-L-alanine amidase
J6625_17810	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
J6625_17815	COG1381	Involved in DNA repair and RecF pathway recombination
J6625_17825	COG0571	ribonuclease III activity
J6625_17830	COG0681	Belongs to the peptidase S26 family
J6625_17835	COG0481	GTPase activity
J6625_17850	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
J6625_17855	COG1595	DNA-templated transcription, initiation
J6625_17860	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
J6625_17870	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
J6625_17880	COG0583	DNA-binding transcription factor activity
J6625_17910	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J6625_17920	COG0126	phosphoglycerate kinase activity
J6625_17925	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
J6625_17930	COG1940	carbohydrate kinase activity
J6625_17935	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
J6625_17945	COG4991	sh3 domain protein
J6625_17950	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
J6625_17965	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
J6625_17970	COG1028	Short-chain dehydrogenase reductase Sdr
J6625_17985	COG1505	serine-type exopeptidase activity
J6625_17990	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
J6625_17995	COG0765	amino acid transport
J6625_18000	COG0765	amino acid transport
J6625_18005	COG1126	abc transporter atp-binding protein
J6625_18010	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J6625_18015	COG3174	membrane
J6625_18020	COG0110	maltose O-acetyltransferase activity
J6625_18050	COG1942	4-Oxalocrotonate Tautomerase
J6625_18060	COG0583	DNA-binding transcription factor activity
J6625_18065	COG0165	Argininosuccinate lyase
J6625_18070	COG0137	argininosuccinate synthase activity
J6625_18080	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
J6625_18085	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
J6625_18095	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
J6625_18100	COG5001	Diguanylate cyclase
J6625_18100	COG5002	protein histidine kinase activity
J6625_18100	COG3447	MASE1 domain protein
J6625_18105	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
J6625_18140	COG0583	DNA-binding transcription factor activity
J6625_18145	COG1380	Effector of murein hydrolase LrgA
J6625_18150	COG1346	cytolysis
J6625_18155	COG0527	aspartate kinase activity
J6625_18155	COG0460	homoserine dehydrogenase
J6625_18160	COG0626	cystathionine gamma-synthase activity
J6625_18175	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J6625_18180	COG0814	amino acid
J6625_18185	COG1218	3'(2'),5'-bisphosphate nucleotidase
J6625_18190	COG0494	nUDIX hydrolase
J6625_18195	COG1011	Hydrolase
J6625_18200	COG1902	pentaerythritol trinitrate reductase activity
J6625_18210	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
J6625_18225	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
J6625_18235	COG3156	type II secretion system protein K
J6625_18245	COG4795	General secretion pathway protein
J6625_18250	COG2165	general secretion pathway protein
J6625_18260	COG2165	general secretion pathway protein
J6625_18265	COG1459	type II secretion system
J6625_18270	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
J6625_18280	COG3031	protein transport across the cell outer membrane
J6625_18290	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
J6625_18295	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
J6625_18310	COG0456	acetyltransferase
J6625_18315	COG3133	Outer membrane lipoprotein
J6625_18320	COG3025	triphosphatase activity
J6625_18325	COG1392	Phosphate transport regulator
J6625_18330	COG0306	phosphate transporter
J6625_18335	COG0617	tRNA 3'-terminal CCA addition
J6625_18340	COG3409	Peptidoglycan-binding domain 1 protein
J6625_18340	COG3267	Type II secretory pathway component ExeA
J6625_18350	COG1194	a g-specific adenine glycosylase
J6625_18355	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
J6625_18370	COG3240	lipase activity
J6625_18380	COG3009	Protein conserved in bacteria
J6625_18385	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
J6625_18385	COG3008	intermembrane lipid transfer
J6625_18390	COG2995	paraquat-inducible protein a
J6625_18400	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
J6625_18405	COG5001	Diguanylate cyclase
J6625_18405	COG4251	negative regulation of phosphorylation
J6625_18405	COG3706	GGDEF domain
J6625_18405	COG2203	Gaf domain
J6625_18410	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
J6625_18415	COG2813	Specifically methylates the guanine in position
J6625_18420	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
J6625_18425	COG0297	glycogen (starch) synthase activity
J6625_18465	COG1757	Na H antiporter
J6625_18470	COG0583	DNA-binding transcription factor activity
J6625_18475	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
J6625_18480	COG3842	ATPase activity
J6625_18485	COG1176	ABC-type spermidine putrescine transport system, permease component I
J6625_18490	COG1177	transmembrane transport
J6625_18495	COG1012	belongs to the aldehyde dehydrogenase family
J6625_18500	COG0109	protoheme IX farnesyltransferase activity
J6625_18530	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
J6625_18540	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
J6625_18540	COG1565	acr, cog1565
J6625_18545	COG1444	tRNA N-acetyltransferase activity
J6625_18565	COG1803	Methylglyoxal synthase
J6625_18580	COG0252	asparaginase activity
J6625_18600	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J6625_18600	COG1263	PTS System
J6625_18605	COG0366	Alpha amylase catalytic
J6625_18610	COG0110	maltose O-acetyltransferase activity
J6625_18615	COG1522	sequence-specific DNA binding
J6625_18650	COG3068	Protein conserved in bacteria
J6625_18660	COG0739	heme binding
J6625_18680	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
J6625_18685	COG1121	(ABC) transporter
J6625_18690	COG1108	ABC-type Mn2 Zn2 transport systems permease components
J6625_18695	COG0583	DNA-binding transcription factor activity
J6625_18705	COG1573	uracil-dna glycosylase
J6625_18710	COG2962	Rard protein
J6625_18715	COG2827	Endonuclease containing a URI domain
J6625_18730	COG1842	Phage shock protein A
J6625_18735	COG0204	Acyl-transferase
J6625_18755	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J6625_18765	COG0484	heat shock protein binding
J6625_18830	COG1289	transmembrane transporter activity
J6625_18835	COG1566	PFAM secretion protein HlyD family protein
J6625_18850	COG1051	belongs to the nudix hydrolase family
J6625_18855	COG3150	esterase
J6625_18865	COG3151	Protein conserved in bacteria
J6625_18870	COG0494	nUDIX hydrolase
J6625_18875	COG1538	Outer membrane efflux protein
J6625_18880	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
J6625_18880	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
J6625_18885	COG1560	Kdo2-lipid A biosynthetic process
J6625_18900	COG2771	luxR family
J6625_18905	COG3916	Acyl-homoserine-lactone synthase
J6625_18915	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
J6625_18925	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
J6625_18925	COG2213	PTS system mannitol-specific
J6625_18930	COG0246	Mannitol dehydrogenase
J6625_18935	COG3722	fumarate hydratase activity
J6625_18940	COG3263	regulation of cellular component size
J6625_18960	COG1671	Belongs to the UPF0178 family
J6625_18975	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J6625_18980	COG0513	Belongs to the DEAD box helicase family
J6625_19000	COG1575	Belongs to the MenA family. Type 1 subfamily
J6625_19005	COG1169	isochorismate synthase
J6625_19010	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
J6625_19015	COG0596	Alpha beta hydrolase
J6625_19020	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
J6625_19030	COG0318	PFAM AMP-dependent synthetase and ligase
J6625_19035	COG3291	Pkd domain containing protein
J6625_19040	COG2949	membrane
J6625_19045	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
J6625_19055	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
J6625_19085	COG2873	o-acetylhomoserine
J6625_19095	COG1979	alcohol dehydrogenase
J6625_19110	COG4221	oxidoreductase activity
J6625_19130	COG1285	pathogenesis
J6625_19145	COG1368	sulfuric ester hydrolase activity
J6625_19150	COG1522	sequence-specific DNA binding
J6625_19160	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
J6625_19170	COG1058	Belongs to the CinA family
J6625_19170	COG1546	Belongs to the CinA family
J6625_19175	COG1988	membrane-bound metal-dependent
J6625_19190	COG0561	phosphatase activity
J6625_19195	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
J6625_19205	COG1011	Hydrolase
J6625_19220	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
J6625_19225	COG0019	diaminopimelate decarboxylase activity
J6625_19235	COG1965	Belongs to the frataxin family
J6625_19240	COG0400	carboxylic ester hydrolase activity
J6625_19245	COG3072	Adenylate cyclase
J6625_19250	COG0181	hydroxymethylbilane synthase activity
J6625_19260	COG2959	enzyme of heme biosynthesis
J6625_19265	COG3071	HemY protein
J6625_19270	COG0312	modulator of DNA gyrase
J6625_19275	COG3028	Belongs to the UPF0307 family
J6625_19285	COG2926	Belongs to the UPF0265 family
J6625_19320	COG1396	sequence-specific DNA binding
J6625_19325	COG3135	benzoate transporter
J6625_19355	COG3047	cAMP biosynthetic process
J6625_19360	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
J6625_19365	COG2197	response regulator
J6625_19385	COG1278	Cold shock
J6625_19415	COG3706	GGDEF domain
J6625_19420	COG0347	Belongs to the P(II) protein family
J6625_19425	COG0004	ammonium transporteR
J6625_19435	COG0346	lactoylglutathione lyase activity
J6625_19450	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
J6625_19455	COG1074	ATP-dependent DNA helicase activity
J6625_19460	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
J6625_19465	COG2259	Doxx family
J6625_19470	COG1741	Belongs to the pirin family
J6625_19480	COG0583	DNA-binding transcription factor activity
J6625_19505	COG1175	transmembrane transport
J6625_19515	COG3842	ATPase activity
J6625_19550	COG0456	acetyltransferase
J6625_19555	COG0753	catalase activity
J6625_19575	COG0494	nUDIX hydrolase
J6625_19580	COG0628	permease
J6625_19590	COG2957	Belongs to the agmatine deiminase family
J6625_19605	COG2957	Belongs to the agmatine deiminase family
J6625_19610	COG0583	DNA-binding transcription factor activity
J6625_19625	COG1461	Dihydroxyacetone kinase
J6625_19630	COG2376	Dihydroxyacetone kinase
J6625_19635	COG2252	PERMEase
J6625_19640	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
J6625_19675	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
J6625_19680	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
J6625_19685	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
J6625_19690	COG0049	tRNA binding
J6625_19695	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
J6625_19700	COG2168	tRNA wobble position uridine thiolation
J6625_19710	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
J6625_19715	COG0251	oxidation-reduction process
J6625_19720	COG2964	Protein conserved in bacteria
J6625_19725	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
J6625_19730	COG0085	RNA polymerase activity
J6625_19735	COG0222	ribosome binding
J6625_19740	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
J6625_19745	COG0081	regulation of translation
J6625_19750	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
J6625_19755	COG0250	Participates in transcription elongation, termination and antitermination
J6625_19770	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
J6625_19795	COG0812	UDP-N-acetylmuramate dehydrogenase activity
J6625_19800	COG0569	domain protein
J6625_19805	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
J6625_19810	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
J6625_19815	COG3005	denitrification pathway
J6625_19820	COG0243	molybdopterin cofactor binding
J6625_19855	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
J6625_19865	COG2204	response regulator
J6625_19875	COG2205	protein histidine kinase activity
J6625_19895	COG4109	DRTGG domain
J6625_19905	COG1522	sequence-specific DNA binding
J6625_19910	COG2502	aspartate--ammonia ligase
J6625_19915	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
J6625_19920	COG0542	response to heat
J6625_19930	COG0564	pseudouridine synthase activity
J6625_19935	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
J6625_19940	COG3681	Belongs to the UPF0597 family
J6625_19945	COG2964	Protein conserved in bacteria
J6625_19950	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
J6625_19955	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
J6625_19960	COG1979	alcohol dehydrogenase
J6625_19965	COG2207	Transcriptional regulator
J6625_19970	COG3040	lipid binding
J6625_19990	COG0583	DNA-binding transcription factor activity
J6625_20010	COG0540	Belongs to the ATCase OTCase family
J6625_20015	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
J6625_20020	COG1438	arginine binding
J6625_20025	COG1288	antiporter activity
J6625_20030	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
J6625_20070	COG3250	beta-galactosidase activity
J6625_20080	COG1609	Transcriptional regulator
J6625_20085	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
J6625_20095	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
J6625_20100	COG2017	converts alpha-aldose to the beta-anomer
J6625_20105	COG0667	Aldo Keto reductase
J6625_20110	COG1968	undecaprenyl-diphosphatase activity
J6625_20115	COG3806	Anti-sigma factor
J6625_20120	COG1595	DNA-templated transcription, initiation
J6625_20140	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
J6625_20145	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
J6625_20150	COG0477	Major facilitator Superfamily
J6625_20165	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
J6625_20170	COG1131	(ABC) transporter
J6625_20175	COG0842	Transport permease protein
J6625_20180	COG0842	Transport permease protein
J6625_20185	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
J6625_20195	COG2116	formate transmembrane transporter activity
J6625_20200	COG1648	precorrin-2 dehydrogenase activity
J6625_20200	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
J6625_20205	COG2239	Acts as a magnesium transporter
J6625_20210	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
J6625_20215	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
J6625_20225	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
J6625_20235	COG0514	ATP-dependent DNA helicase (RecQ)
J6625_20240	COG2050	protein possibly involved in aromatic compounds catabolism
J6625_20255	COG2258	MOSC domain
J6625_20260	COG1177	transmembrane transport
J6625_20265	COG1176	ABC-type spermidine putrescine transport system, permease component I
J6625_20270	COG3842	ATPase activity
J6625_20290	COG0174	glutamine synthetase
J6625_20310	COG3045	CreA protein
J6625_20315	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
J6625_20320	COG0443	Heat shock 70 kDa protein
J6625_20335	COG0366	Alpha amylase catalytic
J6625_20350	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
J6625_20355	COG0745	RESPONSE REGULATOR receiver
J6625_20360	COG2205	protein histidine kinase activity
J6625_20370	COG0281	malic enzyme
J6625_20375	COG0702	epimerase
J6625_20380	COG0254	rRNA binding
J6625_20385	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
J6625_20405	COG0129	dihydroxy-acid dehydratase activity
J6625_20415	COG3978	acetolactate synthase activity
J6625_20425	COG0606	chelatase, subunit chli
J6625_20430	COG0204	Acyl-transferase
J6625_20435	COG0204	Acyl-transferase
J6625_20440	COG1683	Conserved Protein
J6625_20450	COG1335	isochorismatase
J6625_20460	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
J6625_20465	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
J6625_20475	COG3084	Protein conserved in bacteria
J6625_20480	COG2203	Gaf domain
J6625_20480	COG3706	GGDEF domain
J6625_20480	COG4251	negative regulation of phosphorylation
J6625_20480	COG5001	Diguanylate cyclase
J6625_20495	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
J6625_20500	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
J6625_20505	COG1561	YicC-like family, N-terminal region
J6625_20515	COG1519	Transferase
J6625_20520	COG0859	PFAM glycosyl transferase family 9
J6625_20525	COG0463	Glycosyl transferase, family 2
J6625_20530	COG0859	PFAM glycosyl transferase family 9
J6625_20535	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
J6625_20540	COG2990	Protein conserved in bacteria
J6625_20545	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
J6625_20555	COG0267	Belongs to the bacterial ribosomal protein bL33 family
J6625_20560	COG0227	Belongs to the bacterial ribosomal protein bL28 family
J6625_20565	COG2003	Belongs to the UPF0758 family
J6625_20570	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
J6625_20575	COG0756	dUTP diphosphatase activity
J6625_20580	COG1309	transcriptional regulator
J6625_20590	COG0668	transmembrane transport
J6625_20600	COG0166	Belongs to the GPI family
J6625_20605	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
J6625_20610	COG0583	DNA-binding transcription factor activity
J6625_20620	COG1042	CoA-binding domain protein
J6625_20620	COG0045	succinate-CoA ligase (ADP-forming) activity
J6625_20620	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J6625_20645	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
J6625_20650	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
J6625_20655	COG1739	Uncharacterized protein family UPF0029
J6625_20660	COG0006	proline dipeptidase activity
J6625_20665	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
J6625_20670	COG1250	3-hydroxyacyl-CoA dehydrogenase
J6625_20670	COG1024	Enoyl-CoA hydratase
J6625_20675	COG0183	Belongs to the thiolase family
J6625_20710	COG0425	Belongs to the sulfur carrier protein TusA family
J6625_20715	COG0251	oxidation-reduction process
J6625_20735	COG2885	chlorophyll binding
J6625_20745	COG1335	isochorismatase
J6625_20755	COG2818	Glycosylase
J6625_20760	COG0752	glycyl-tRNA synthetase alpha subunit
J6625_20765	COG0751	glycine-tRNA ligase activity
J6625_20780	COG5001	Diguanylate cyclase
J6625_20780	COG4251	negative regulation of phosphorylation
J6625_20780	COG3706	GGDEF domain
J6625_20780	COG2203	Gaf domain
J6625_20800	COG0814	amino acid
J6625_20805	COG0814	amino acid
J6625_20810	COG3033	Beta-eliminating lyase
J6625_20825	COG0348	domain, Protein
J6625_20835	COG0446	pyridine nucleotide-disulphide oxidoreductase
J6625_20840	COG0426	domain, Protein
J6625_20840	COG1773	rubredoxin
J6625_20845	COG3604	Transcriptional regulator
J6625_20850	COG1609	Transcriptional regulator
J6625_20890	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J6625_20910	COG2960	long-chain fatty acid transporting porin activity
J6625_20920	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
J6625_20935	COG3118	belongs to the thioredoxin family
J6625_20940	COG0513	Belongs to the DEAD box helicase family
J6625_20945	COG0248	Ppx GppA phosphatase
J6625_20955	COG0742	ribosomal rna small subunit methyltransferase
J6625_20975	COG0084	hydrolase, TatD family'
J6625_20980	COG0805	protein transport
J6625_20985	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
J6625_20990	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
J6625_20995	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
J6625_21000	COG3165	ubiquinone biosynthetic process from chorismate
J6625_21010	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
J6625_21015	COG0402	S-adenosylhomocysteine deaminase activity
J6625_21055	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
J6625_21060	COG0848	biopolymer transport protein
J6625_21065	COG0811	peptide transport
J6625_21070	COG0811	peptide transport
J6625_21080	COG2771	luxR family
J6625_21085	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
J6625_21090	COG1349	DNA-binding transcription factor activity
J6625_21095	COG0745	RESPONSE REGULATOR receiver
J6625_21100	COG2205	protein histidine kinase activity
J6625_21110	COG4452	Inner membrane protein CreD
J6625_21115	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
J6625_21120	COG0355	proton-transporting ATP synthase activity, rotational mechanism
J6625_21125	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
J6625_21130	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
J6625_21135	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
J6625_21140	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
J6625_21145	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
J6625_21155	COG0356	it plays a direct role in the translocation of protons across the membrane
J6625_21165	COG1475	DNA binding
J6625_21170	COG1192	Involved in chromosome partitioning
J6625_21175	COG0357	Ribosomal RNA small subunit methyltransferase G
J6625_21180	COG0445	tRNA wobble uridine modification
J6625_21185	COG0716	FMN binding
J6625_21190	COG4774	siderophore transport
J6625_21195	COG4615	Cyclic peptide transporter
J6625_21200	COG1120	ATPase activity
J6625_21205	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J6625_21220	COG3550	peptidyl-serine autophosphorylation
J6625_21245	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
J6625_21250	COG0706	membrane insertase activity
J6625_21255	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
J6625_21260	COG0594	ribonuclease P activity
J6625_21265	COG0230	Belongs to the bacterial ribosomal protein bL34 family
J6625_21270	COG1126	abc transporter atp-binding protein