locus-tag class description MF133_00010 PF02652 L-lactate permease MF133_00020 PF02754 Cysteine-rich domain MF133_00045 PF02913 FAD linked oxidases, C-terminal domain MF133_00045 PF01565 FAD binding domain MF133_00105 PF03600 Citrate transporter MF133_00135 PF01593 Flavin containing amine oxidoreductase MF133_00140 PF03239 Iron permease FTR1 family MF133_00175 PF04168 A predicted alpha-helical domain with a conserved ER motif. MF133_00175 PF14403 Circularly permuted ATP-grasp type 2 MF133_00180 PF14403 Circularly permuted ATP-grasp type 2 MF133_00200 PF00916 Sulfate permease family MF133_00200 PF01740 STAS domain MF133_00225 PF05638 Type VI secretion system effector, Hcp MF133_00230 PF04717 Type VI secretion system, phage-baseplate injector MF133_00240 PF03527 RHS protein MF133_00240 PF05593 RHS Repeat MF133_00255 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath MF133_00265 PF05947 Type VI secretion system, TssF MF133_00285 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE MF133_00295 PF10431 C-terminal, D2-small domain, of ClpB protein MF133_00295 PF00004 ATPase family associated with various cellular activities (AAA) MF133_00295 PF07724 AAA domain (Cdc48 subfamily) MF133_00295 PF17871 AAA lid domain MF133_00300 PF00158 Sigma-54 interaction domain MF133_00300 PF02954 Bacterial regulatory protein, Fis family MF133_00315 PF06761 Intracellular multiplication and human macrophage-killing MF133_00315 PF06744 Type VI secretion protein IcmF C-terminal MF133_00315 PF14331 ImcF-related N-terminal domain MF133_00330 PF04717 Type VI secretion system, phage-baseplate injector MF133_00335 PF00182 Chitinase class I MF133_00345 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MF133_00345 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal MF133_00350 PF13247 4Fe-4S dicluster domain MF133_00355 PF03916 Polysulphide reductase, NrfD MF133_00360 PF00374 Nickel-dependent hydrogenase MF133_00365 PF01750 Hydrogenase maturation protease MF133_00370 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE MF133_00375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MF133_00380 PF00528 Binding-protein-dependent transport system inner membrane component MF133_00385 PF00528 Binding-protein-dependent transport system inner membrane component MF133_00385 PF12911 N-terminal TM domain of oligopeptide transport permease C MF133_00390 PF00005 ABC transporter MF133_00395 PF08402 TOBE domain MF133_00395 PF00005 ABC transporter MF133_00400 PF02492 CobW/HypB/UreG, nucleotide-binding domain MF133_00410 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MF133_00415 PF00586 AIR synthase related protein, N-terminal domain MF133_00415 PF02769 AIR synthase related protein, C-terminal domain MF133_00420 PF01924 Hydrogenase formation hypA family MF133_00425 PF01455 HupF/HypC family MF133_00430 PF00708 Acylphosphatase MF133_00430 PF07503 HypF finger MF133_00430 PF17788 HypF Kae1-like domain MF133_00430 PF01300 Telomere recombination MF133_00435 PF13662 Toprim domain MF133_00435 PF02132 RecR protein MF133_00440 PF00183 Hsp90 protein MF133_00440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_00445 PF05191 Adenylate kinase, active site lid MF133_00450 PF00762 Ferrochelatase MF133_00455 PF01124 MAPEG family MF133_00460 PF00294 pfkB family carbohydrate kinase MF133_00465 PF17200 Single Cache domain 2 MF133_00465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_00465 PF00672 HAMP domain MF133_00480 PF03707 Bacterial signalling protein N terminal repeat MF133_00480 PF00563 EAL domain MF133_00480 PF00990 Diguanylate cyclase, GGDEF domain MF133_00485 PF00483 Nucleotidyl transferase MF133_00495 PF07273 Protein of unknown function (DUF1439) MF133_00500 PF00425 chorismate binding enzyme MF133_00505 PF13193 AMP-binding enzyme C-terminal domain MF133_00505 PF00501 AMP-binding enzyme MF133_00510 PF00857 Isochorismatase family MF133_00510 PF00550 Phosphopantetheine attachment site MF133_00515 PF00975 Thioesterase domain MF133_00515 PF00550 Phosphopantetheine attachment site MF133_00515 PF00668 Condensation domain MF133_00515 PF13193 AMP-binding enzyme C-terminal domain MF133_00515 PF00501 AMP-binding enzyme MF133_00525 PF13193 AMP-binding enzyme C-terminal domain MF133_00525 PF00550 Phosphopantetheine attachment site MF133_00525 PF07993 Male sterility protein MF133_00525 PF00668 Condensation domain MF133_00525 PF00501 AMP-binding enzyme MF133_00530 PF13193 AMP-binding enzyme C-terminal domain MF133_00530 PF00975 Thioesterase domain MF133_00530 PF00501 AMP-binding enzyme MF133_00530 PF00668 Condensation domain MF133_00530 PF00550 Phosphopantetheine attachment site MF133_00535 PF01497 Periplasmic binding protein MF133_00540 PF17837 4'-phosphopantetheinyl transferase N-terminal domain MF133_00540 PF01648 4'-phosphopantetheinyl transferase superfamily MF133_00545 PF00005 ABC transporter MF133_00550 PF01032 FecCD transport family MF133_00555 PF01032 FecCD transport family MF133_00560 PF00593 TonB dependent receptor MF133_00560 PF07715 TonB-dependent Receptor Plug Domain MF133_00575 PF11143 Protein of unknown function (DUF2919) MF133_00580 PF01544 CorA-like Mg2+ transporter protein MF133_00590 PF01012 Electron transfer flavoprotein domain MF133_00595 PF01012 Electron transfer flavoprotein domain MF133_00595 PF00766 Electron transfer flavoprotein FAD-binding domain MF133_00600 PF00266 Aminotransferase class-V MF133_00605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MF133_00610 PF00793 DAHP synthetase I family MF133_00615 PF03741 Integral membrane protein TerC family MF133_00625 PF08891 YfcL protein MF133_00630 PF00501 AMP-binding enzyme MF133_00635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MF133_00635 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region MF133_00640 PF04172 LrgB-like family MF133_00645 PF03788 LrgA family MF133_00660 PF00929 Exonuclease MF133_00660 PF08411 Exonuclease C-terminal MF133_00665 PF00149 Calcineurin-like phosphoesterase MF133_00670 PF03706 Lysylphosphatidylglycerol synthase TM region MF133_00670 PF09924 Uncharacterised conserved protein (DUF2156) MF133_00680 PF00497 Bacterial extracellular solute-binding proteins, family 3 MF133_00685 PF00795 Carbon-nitrogen hydrolase MF133_00690 PF00155 Aminotransferase class I and II MF133_00695 PF03466 LysR substrate binding domain MF133_00695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_00700 PF02610 L-arabinose isomerase MF133_00700 PF11762 L-arabinose isomerase C-terminal domain MF133_00705 PF00596 Class II Aldolase and Adducin N-terminal domain MF133_00710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MF133_00715 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MF133_00720 PF00005 ABC transporter MF133_00725 PF02653 Branched-chain amino acid transport system / permease component MF133_00730 PF02311 AraC-like ligand binding domain MF133_00730 PF12833 Helix-turn-helix domain MF133_00735 PF00444 Ribosomal protein L36 MF133_00740 PF01197 Ribosomal protein L31 MF133_00755 PF01863 Protein of unknown function DUF45 MF133_00770 PF03606 C4-dicarboxylate anaerobic carrier MF133_00780 PF01266 FAD dependent oxidoreductase MF133_00780 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MF133_00785 PF00109 Beta-ketoacyl synthase, N-terminal domain MF133_00785 PF02801 Beta-ketoacyl synthase, C-terminal domain MF133_00800 PF00285 Citrate synthase, C-terminal domain MF133_00805 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MF133_00810 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MF133_00815 PF00890 FAD binding domain MF133_00815 PF02910 Fumarate reductase flavoprotein C-term MF133_00820 PF13085 2Fe-2S iron-sulfur cluster binding domain MF133_00825 PF02779 Transketolase, pyrimidine binding domain MF133_00825 PF16870 2-oxoglutarate dehydrogenase C-terminal MF133_00825 PF00676 Dehydrogenase E1 component MF133_00825 PF16078 2-oxoglutarate dehydrogenase N-terminus MF133_00830 PF02817 e3 binding domain MF133_00830 PF00364 Biotin-requiring enzyme MF133_00830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MF133_00835 PF00549 CoA-ligase MF133_00835 PF08442 ATP-grasp domain MF133_00840 PF00549 CoA-ligase MF133_00840 PF02629 CoA binding domain MF133_00850 PF03692 Putative zinc- or iron-chelating domain MF133_00855 PF01266 FAD dependent oxidoreductase MF133_00860 PF00528 Binding-protein-dependent transport system inner membrane component MF133_00865 PF00005 ABC transporter MF133_00875 PF00392 Bacterial regulatory proteins, gntR family MF133_00875 PF07702 UTRA domain MF133_00880 PF00266 Aminotransferase class-V MF133_00885 PF00202 Aminotransferase class-III MF133_00895 PF01228 Glycine radical MF133_00895 PF02901 Pyruvate formate lyase-like MF133_00900 PF01226 Formate/nitrite transporter MF133_00905 PF18381 YcaO cyclodehydratase C-terminal domain MF133_00905 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding MF133_00915 PF00893 Small Multidrug Resistance protein MF133_00920 PF02774 Semialdehyde dehydrogenase, dimerisation domain MF133_00920 PF01118 Semialdehyde dehydrogenase, NAD binding domain MF133_00925 PF00313 'Cold-shock' DNA-binding domain MF133_00930 PF02617 ATP-dependent Clp protease adaptor protein ClpS MF133_00935 PF10431 C-terminal, D2-small domain, of ClpB protein MF133_00935 PF02861 Clp amino terminal domain, pathogenicity island component MF133_00935 PF17871 AAA lid domain MF133_00935 PF07724 AAA domain (Cdc48 subfamily) MF133_00935 PF00004 ATPase family associated with various cellular activities (AAA) MF133_00940 PF01176 Translation initiation factor 1A / IF-1 MF133_00945 PF04376 Arginine-tRNA-protein transferase, N terminus MF133_00945 PF04377 Arginine-tRNA-protein transferase, C terminus MF133_00950 PF03588 Leucyl/phenylalanyl-tRNA protein transferase MF133_00955 PF05433 Glycine zipper 2TM domain MF133_00960 PF05230 MASE2 domain MF133_00960 PF00990 Diguanylate cyclase, GGDEF domain MF133_00965 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF133_00970 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MF133_00970 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MF133_00975 PF01037 Lrp/AsnC ligand binding domain MF133_00980 PF17854 FtsK alpha domain MF133_00980 PF01580 FtsK/SpoIIIE family MF133_00980 PF09397 Ftsk gamma domain MF133_00980 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MF133_00985 PF03548 Outer membrane lipoprotein carrier protein LolA MF133_00990 PF00004 ATPase family associated with various cellular activities (AAA) MF133_00990 PF16193 AAA C-terminal domain MF133_00990 PF12002 MgsA AAA+ ATPase C terminal MF133_00995 PF02403 Seryl-tRNA synthetase N-terminal domain MF133_00995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MF133_01000 PF02674 Colicin V production protein MF133_01005 PF00156 Phosphoribosyl transferase domain MF133_01010 PF00232 Glycosyl hydrolase family 1 MF133_01015 PF00367 phosphotransferase system, EIIB MF133_01015 PF02378 Phosphotransferase system, EIIC MF133_01020 PF00356 Bacterial regulatory proteins, lacI family MF133_01025 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) MF133_01030 PF00005 ABC transporter MF133_01035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MF133_01035 PF00005 ABC transporter MF133_01040 PF12911 N-terminal TM domain of oligopeptide transport permease C MF133_01040 PF00528 Binding-protein-dependent transport system inner membrane component MF133_01045 PF00528 Binding-protein-dependent transport system inner membrane component MF133_01050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MF133_01055 PF02954 Bacterial regulatory protein, Fis family MF133_01055 PF00158 Sigma-54 interaction domain MF133_01060 PF04012 PspA/IM30 family MF133_01065 PF06667 Phage shock protein B MF133_01075 PF04317 YcjX-like family, DUF463 MF133_01080 PF05128 Domain of unknown function (DUF697) MF133_01085 PF00351 Biopterin-dependent aromatic amino acid hydroxylase MF133_01090 PF01329 Pterin 4 alpha carbinolamine dehydratase MF133_01095 PF18024 Helix-turn-helix domain MF133_01095 PF00158 Sigma-54 interaction domain MF133_01100 PF13689 YfiR/HmsC-like MF133_01105 PF00563 EAL domain MF133_01105 PF00990 Diguanylate cyclase, GGDEF domain MF133_01105 PF03707 Bacterial signalling protein N terminal repeat MF133_01110 PF00691 OmpA family MF133_01115 PF04055 Radical SAM superfamily MF133_01120 PF02601 Exonuclease VII, large subunit MF133_01120 PF13742 OB-fold nucleic acid binding domain MF133_01130 PF02472 Biopolymer transport protein ExbD/TolR MF133_01135 PF01618 MotA/TolQ/ExbB proton channel family MF133_01145 PF03423 Carbohydrate binding domain (family 25) MF133_01145 PF00128 Alpha amylase, catalytic domain MF133_01145 PF01373 Glycosyl hydrolase family 14 MF133_01155 PF00478 IMP dehydrogenase / GMP reductase domain MF133_01155 PF00571 CBS domain MF133_01160 PF02540 NAD synthase MF133_01160 PF00958 GMP synthase C terminal domain MF133_01160 PF00117 Glutamine amidotransferase class-I MF133_01165 PF13286 Phosphohydrolase-associated domain MF133_01165 PF01966 HD domain MF133_01175 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MF133_01175 PF12833 Helix-turn-helix domain MF133_01175 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MF133_01175 PF02805 Metal binding domain of Ada MF133_01195 PF01047 MarR family MF133_01205 PF05724 Thiopurine S-methyltransferase (TPMT) MF133_01210 PF00675 Insulinase (Peptidase family M16) MF133_01210 PF05193 Peptidase M16 inactive domain MF133_01210 PF16187 Middle or third domain of peptidase_M16 MF133_01215 PF00300 Histidine phosphatase superfamily (branch 1) MF133_01225 PF00892 EamA-like transporter family MF133_01230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MF133_01235 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MF133_01240 PF17757 UvrB interaction domain MF133_01240 PF03461 TRCF domain MF133_01240 PF00271 Helicase conserved C-terminal domain MF133_01240 PF00270 DEAD/DEAH box helicase MF133_01240 PF02559 CarD-like/TRCF domain MF133_01250 PF12704 MacB-like periplasmic core domain MF133_01250 PF02687 FtsX-like permease family MF133_01255 PF00005 ABC transporter MF133_01260 PF02687 FtsX-like permease family MF133_01260 PF12704 MacB-like periplasmic core domain MF133_01275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MF133_01275 PF05698 Bacterial trigger factor protein (TF) C-terminus MF133_01275 PF05697 Bacterial trigger factor protein (TF) MF133_01280 PF00574 Clp protease MF133_01285 PF06689 ClpX C4-type zinc finger MF133_01285 PF10431 C-terminal, D2-small domain, of ClpB protein MF133_01285 PF07724 AAA domain (Cdc48 subfamily) MF133_01290 PF00004 ATPase family associated with various cellular activities (AAA) MF133_01290 PF05362 Lon protease (S16) C-terminal proteolytic domain MF133_01290 PF02190 ATP-dependent protease La (LON) substrate-binding domain MF133_01295 PF00216 Bacterial DNA-binding protein MF133_01300 PF13145 PPIC-type PPIASE domain MF133_01305 PF12848 ABC transporter MF133_01305 PF00005 ABC transporter MF133_01310 PF00474 Sodium:solute symporter family MF133_01315 PF04341 Protein of unknown function, DUF485 MF133_01330 PF00378 Enoyl-CoA hydratase/isomerase MF133_01335 PF01235 Sodium:alanine symporter family MF133_01345 PF06167 Glucose-regulated metallo-peptidase M90 MF133_01350 PF01184 GPR1/FUN34/yaaH family MF133_01360 PF09278 MerR, DNA binding MF133_01360 PF00376 MerR family regulatory protein MF133_01365 PF00682 HMGL-like MF133_01370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MF133_01370 PF00289 Biotin carboxylase, N-terminal domain MF133_01370 PF00364 Biotin-requiring enzyme MF133_01370 PF02785 Biotin carboxylase C-terminal domain MF133_01375 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MF133_01375 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MF133_01375 PF00378 Enoyl-CoA hydratase/isomerase MF133_01380 PF01039 Carboxyl transferase domain MF133_01385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MF133_01385 PF02770 Acyl-CoA dehydrogenase, middle domain MF133_01385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MF133_01390 PF00171 Aldehyde dehydrogenase family MF133_01395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MF133_01395 PF02770 Acyl-CoA dehydrogenase, middle domain MF133_01395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MF133_01400 PF00378 Enoyl-CoA hydratase/isomerase MF133_01405 PF00378 Enoyl-CoA hydratase/isomerase MF133_01410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MF133_01410 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MF133_01420 PF13520 Amino acid permease MF133_01425 PF01925 Sulfite exporter TauE/SafE MF133_01455 PF12706 Beta-lactamase superfamily domain MF133_01460 PF02653 Branched-chain amino acid transport system / permease component MF133_01465 PF02653 Branched-chain amino acid transport system / permease component MF133_01470 PF00005 ABC transporter MF133_01475 PF13407 Periplasmic binding protein domain MF133_01480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_01480 PF03466 LysR substrate binding domain MF133_01490 PF13402 Peptidase M60, enhancin and enhancin-like MF133_01490 PF18642 Immunomodulating metalloprotease helical domain MF133_01490 PF18650 Immunomodulating metalloprotease N-terminal domain MF133_01495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_01495 PF03466 LysR substrate binding domain MF133_01500 PF02634 FdhD/NarQ family MF133_01505 PF00384 Molybdopterin oxidoreductase MF133_01510 PF00990 Diguanylate cyclase, GGDEF domain MF133_01510 PF00072 Response regulator receiver domain MF133_01515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_01515 PF03466 LysR substrate binding domain MF133_01520 PF00232 Glycosyl hydrolase family 1 MF133_01530 PF03466 LysR substrate binding domain MF133_01530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_01540 PF00933 Glycosyl hydrolase family 3 N terminal domain MF133_01545 PF01261 Xylose isomerase-like TIM barrel MF133_01550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MF133_01550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MF133_01555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_01555 PF03466 LysR substrate binding domain MF133_01565 PF03279 Bacterial lipid A biosynthesis acyltransferase MF133_01570 PF03279 Bacterial lipid A biosynthesis acyltransferase MF133_01580 PF02678 Pirin MF133_01580 PF05726 Pirin C-terminal cupin domain MF133_01585 PF03104 DNA polymerase family B, exonuclease domain MF133_01585 PF00136 DNA polymerase family B MF133_01615 PF01554 MatE MF133_01620 PF06786 Uncharacterised protein family (UPF0253) MF133_01625 PF00677 Lumazine binding domain MF133_01640 PF13419 Haloacid dehalogenase-like hydrolase MF133_01645 PF02222 ATP-grasp domain MF133_01645 PF01370 NAD dependent epimerase/dehydratase family MF133_01650 PF00892 EamA-like transporter family MF133_01655 PF02525 Flavodoxin-like fold MF133_01680 PF17783 CvfB-like winged helix domain MF133_01680 PF13509 S1 domain MF133_01690 PF04269 Protein of unknown function, DUF440 MF133_01695 PF00912 Transglycosylase MF133_01700 PF04269 Protein of unknown function, DUF440 MF133_01705 PF03776 Septum formation topological specificity factor MinE MF133_01710 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MF133_01715 PF03775 Septum formation inhibitor MinC, C-terminal domain MF133_01715 PF05209 Septum formation inhibitor MinC, N-terminal domain MF133_01720 PF05166 YcgL domain MF133_01725 PF13406 Transglycosylase SLT domain MF133_01730 PF03313 Serine dehydratase alpha chain MF133_01730 PF03315 Serine dehydratase beta chain MF133_01735 PF03315 Serine dehydratase beta chain MF133_01735 PF03313 Serine dehydratase alpha chain MF133_01740 PF06865 Pyrimidine/purine nucleoside phosphorylase MF133_01745 PF00375 Sodium:dicarboxylate symporter family MF133_01750 PF00376 MerR family regulatory protein MF133_01750 PF09278 MerR, DNA binding MF133_01755 PF02803 Thiolase, C-terminal domain MF133_01755 PF00108 Thiolase, N-terminal domain MF133_01760 PF00563 EAL domain MF133_01760 PF08668 HDOD domain MF133_01765 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MF133_01770 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MF133_01780 PF08281 Sigma-70, region 4 MF133_01780 PF04542 Sigma-70 region 2 MF133_01805 PF01882 Protein of unknown function DUF58 MF133_01810 PF17863 AAA lid domain MF133_01810 PF07726 ATPase family associated with various cellular activities (AAA) MF133_01815 PF00108 Thiolase, N-terminal domain MF133_01815 PF02803 Thiolase, C-terminal domain MF133_01820 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MF133_01820 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MF133_01820 PF00378 Enoyl-CoA hydratase/isomerase MF133_01830 PF07152 YaeQ protein MF133_01840 PF06074 Protein of unknown function (DUF935) MF133_01935 PF06892 Phage regulatory protein CII (CP76) MF133_01970 PF02899 Phage integrase, N-terminal SAM-like domain MF133_01970 PF00589 Phage integrase family MF133_01975 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MF133_01975 PF01409 tRNA synthetases class II core domain (F) MF133_01980 PF03484 tRNA synthetase B5 domain MF133_01980 PF01588 Putative tRNA binding domain MF133_01980 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MF133_01980 PF03483 B3/4 domain MF133_01980 PF03147 Ferredoxin-fold anticodon binding domain MF133_01985 PF00216 Bacterial DNA-binding protein MF133_01990 PF00072 Response regulator receiver domain MF133_01990 PF09456 RcsC Alpha-Beta-Loop (ABL) MF133_01990 PF00512 His Kinase A (phospho-acceptor) domain MF133_01990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_02005 PF02146 Sir2 family MF133_02020 PF00356 Bacterial regulatory proteins, lacI family MF133_02025 PF00294 pfkB family carbohydrate kinase MF133_02030 PF13407 Periplasmic binding protein domain MF133_02035 PF02653 Branched-chain amino acid transport system / permease component MF133_02040 PF00005 ABC transporter MF133_02045 PF05025 RbsD / FucU transport protein family MF133_02050 PF00043 Glutathione S-transferase, C-terminal domain MF133_02050 PF02798 Glutathione S-transferase, N-terminal domain MF133_02065 PF01171 PP-loop family MF133_02070 PF00582 Universal stress protein family MF133_02075 PF13545 Crp-like helix-turn-helix domain MF133_02075 PF00027 Cyclic nucleotide-binding domain MF133_02090 PF00403 Heavy-metal-associated domain MF133_02100 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP MF133_02100 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MF133_02115 PF00115 Cytochrome C and Quinol oxidase polypeptide I MF133_02125 PF13185 GAF domain MF133_02130 PF17516 ProQ C-terminal domain MF133_02130 PF04352 ProQ/FINO family MF133_02135 PF11818 C-terminal domain of tail specific protease (DUF3340) MF133_02135 PF00595 PDZ domain MF133_02135 PF03572 Peptidase family S41 MF133_02135 PF17804 Tail specific protease N-terminal domain MF133_02140 PF11940 Domain of unknown function (DUF3458) Ig-like fold MF133_02140 PF17432 Domain of unknown function (DUF3458_C) ARM repeats MF133_02140 PF01433 Peptidase family M1 domain MF133_02150 PF05088 Bacterial NAD-glutamate dehydrogenase MF133_02155 PF01180 Dihydroorotate dehydrogenase MF133_02160 PF07126 Cell-division protein ZapC MF133_02165 PF10672 S-adenosylmethionine-dependent methyltransferase MF133_02165 PF02926 THUMP domain MF133_02165 PF01170 Putative RNA methylase family UPF0020 MF133_02175 PF00005 ABC transporter MF133_02175 PF16326 ABC transporter C-terminal domain MF133_02175 PF12848 ABC transporter MF133_02185 PF04957 Ribosome modulation factor MF133_02190 PF07977 FabA-like domain MF133_02195 PF13654 AAA domain MF133_02195 PF05362 Lon protease (S16) C-terminal proteolytic domain MF133_02320 PF07130 YebG protein MF133_02330 PF04403 Paraquat-inducible protein A MF133_02340 PF01189 16S rRNA methyltransferase RsmB/F MF133_02340 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF MF133_02340 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF MF133_02370 PF00589 Phage integrase family MF133_02375 PF01026 TatD related DNase MF133_02380 PF09115 DNA polymerase III, delta subunit, C terminal MF133_02385 PF02223 Thymidylate kinase MF133_02390 PF02618 YceG-like family MF133_02395 PF01063 Amino-transferase class IV MF133_02400 PF00109 Beta-ketoacyl synthase, N-terminal domain MF133_02400 PF02801 Beta-ketoacyl synthase, C-terminal domain MF133_02405 PF00550 Phosphopantetheine attachment site MF133_02415 PF00698 Acyl transferase domain MF133_02420 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MF133_02420 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MF133_02425 PF02504 Fatty acid synthesis protein MF133_02430 PF01783 Ribosomal L32p protein family MF133_02435 PF02620 Large ribosomal RNA subunit accumulation protein YceD MF133_02445 PF02545 Maf-like protein MF133_02450 PF00849 RNA pseudouridylate synthase MF133_02450 PF01479 S4 domain MF133_02455 PF00575 S1 RNA binding domain MF133_02455 PF10150 Ribonuclease E/G family MF133_02455 PF12111 Polyribonucleotide phosphorylase C terminal MF133_02460 PF01384 Phosphate transporter family MF133_02465 PF00692 dUTPase MF133_02470 PF00485 Phosphoribulokinase / Uridine kinase family MF133_02475 PF10609 NUBPL iron-transfer P-loop NTPase MF133_02480 PF08264 Anticodon-binding domain of tRNA MF133_02480 PF09334 tRNA synthetases class I (M) MF133_02480 PF01588 Putative tRNA binding domain MF133_02490 PF00708 Acylphosphatase MF133_02495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_02495 PF12729 Four helix bundle sensory module for signal transduction MF133_02495 PF00672 HAMP domain MF133_02500 PF10672 S-adenosylmethionine-dependent methyltransferase MF133_02500 PF17785 PUA-like domain MF133_02515 PF00586 AIR synthase related protein, N-terminal domain MF133_02515 PF02769 AIR synthase related protein, C-terminal domain MF133_02525 PF00753 Metallo-beta-lactamase superfamily MF133_02530 PF00072 Response regulator receiver domain MF133_02535 PF00672 HAMP domain MF133_02535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_02535 PF00512 His Kinase A (phospho-acceptor) domain MF133_02535 PF01627 Hpt domain MF133_02535 PF00072 Response regulator receiver domain MF133_02535 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MF133_02540 PF01386 Ribosomal L25p family MF133_02550 PF11898 Domain of unknown function (DUF3418) MF133_02550 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MF133_02550 PF00270 DEAD/DEAH box helicase MF133_02550 PF04408 Helicase associated domain (HA2) MF133_02550 PF00271 Helicase conserved C-terminal domain MF133_02555 PF00571 CBS domain MF133_02555 PF01368 DHH family MF133_02555 PF02272 DHHA1 domain MF133_02555 PF01743 Poly A polymerase head domain MF133_02560 PF00196 Bacterial regulatory proteins, luxR family MF133_02560 PF00072 Response regulator receiver domain MF133_02565 PF07670 Nucleoside recognition MF133_02570 PF05726 Pirin C-terminal cupin domain MF133_02570 PF02678 Pirin MF133_02575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_02575 PF03466 LysR substrate binding domain MF133_02580 PF02575 YbaB/EbfC DNA-binding family MF133_02585 PF12169 DNA polymerase III subunits gamma and tau domain III MF133_02585 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MF133_02585 PF12170 DNA polymerase III tau subunit V interacting with alpha MF133_02590 PF00156 Phosphoribosyl transferase domain MF133_02595 PF04304 Protein of unknown function (DUF454) MF133_02600 PF01207 Dihydrouridine synthase (Dus) MF133_02610 PF00892 EamA-like transporter family MF133_02620 PF01612 3'-5' exonuclease MF133_02620 PF00570 HRDC domain MF133_02625 PF13193 AMP-binding enzyme C-terminal domain MF133_02625 PF00501 AMP-binding enzyme MF133_02630 PF00561 alpha/beta hydrolase fold MF133_02640 PF00814 Glycoprotease family MF133_02645 PF13307 Helicase C-terminal domain MF133_02645 PF04851 Type III restriction enzyme, res subunit MF133_02655 PF01634 ATP phosphoribosyltransferase MF133_02655 PF08029 HisG, C-terminal domain MF133_02660 PF00815 Histidinol dehydrogenase MF133_02665 PF00155 Aminotransferase class I and II MF133_02670 PF00475 Imidazoleglycerol-phosphate dehydratase MF133_02670 PF08645 Polynucleotide kinase 3 phosphatase MF133_02675 PF00117 Glutamine amidotransferase class-I MF133_02680 PF00977 Histidine biosynthesis protein MF133_02685 PF00072 Response regulator receiver domain MF133_02690 PF08448 PAS fold MF133_02690 PF00990 Diguanylate cyclase, GGDEF domain MF133_02695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_02695 PF00512 His Kinase A (phospho-acceptor) domain MF133_02695 PF01627 Hpt domain MF133_02695 PF00072 Response regulator receiver domain MF133_02700 PF00977 Histidine biosynthesis protein MF133_02705 PF01502 Phosphoribosyl-AMP cyclohydrolase MF133_02705 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MF133_02715 PF08279 HTH domain MF133_02715 PF13280 WYL domain MF133_02720 PF13193 AMP-binding enzyme C-terminal domain MF133_02720 PF00501 AMP-binding enzyme MF133_02725 PF05433 Glycine zipper 2TM domain MF133_02740 PF01032 FecCD transport family MF133_02745 PF00005 ABC transporter MF133_02750 PF07690 Major Facilitator Superfamily MF133_02775 PF00453 Ribosomal protein L20 MF133_02780 PF01632 Ribosomal protein L35 MF133_02785 PF00707 Translation initiation factor IF-3, C-terminal domain MF133_02785 PF05198 Translation initiation factor IF-3, N-terminal domain MF133_02790 PF03129 Anticodon binding domain MF133_02790 PF02824 TGS domain MF133_02790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MF133_02790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MF133_02805 PF04055 Radical SAM superfamily MF133_02815 PF03989 DNA gyrase C-terminal domain, beta-propeller MF133_02815 PF00521 DNA gyrase/topoisomerase IV, subunit A MF133_02825 PF13419 Haloacid dehalogenase-like hydrolase MF133_02830 PF03477 ATP cone domain MF133_02830 PF02867 Ribonucleotide reductase, barrel domain MF133_02830 PF00317 Ribonucleotide reductase, all-alpha domain MF133_02835 PF00268 Ribonucleotide reductase, small chain MF133_02840 PF00111 2Fe-2S iron-sulfur cluster binding domain MF133_02845 PF06725 3D domain MF133_02845 PF03562 MltA specific insert domain MF133_02850 PF06945 Protein of unknown function (DUF1289) MF133_02855 PF02378 Phosphotransferase system, EIIC MF133_02855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MF133_02860 PF00294 pfkB family carbohydrate kinase MF133_02865 PF00381 PTS HPr component phosphorylation site MF133_02865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MF133_02870 PF00356 Bacterial regulatory proteins, lacI family MF133_02870 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MF133_02890 PF00270 DEAD/DEAH box helicase MF133_02890 PF00271 Helicase conserved C-terminal domain MF133_02900 PF01264 Chorismate synthase MF133_02905 PF05175 Methyltransferase small domain MF133_02910 PF01713 Smr domain MF133_02935 PF08329 Chitinase A, N-terminal domain MF133_02935 PF00704 Glycosyl hydrolases family 18 MF133_02945 PF08274 PhnA Zinc-Ribbon MF133_02945 PF03831 PhnA domain MF133_02950 PF01810 LysE type translocator MF133_02975 PF01791 DeoC/LacD family aldolase MF133_02985 PF01048 Phosphorylase superfamily MF133_02990 PF03466 LysR substrate binding domain MF133_02990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_03010 PF03330 Lytic transglycolase MF133_03015 PF04310 MukB N-terminal MF133_03015 PF16330 MukB hinge domain MF133_03020 PF04288 MukE-like family MF133_03025 PF03882 MukF winged-helix domain MF133_03025 PF17193 MukF C-terminal domain MF133_03025 PF17192 MukF middle domain MF133_03030 PF13847 Methyltransferase domain MF133_03035 PF02698 DUF218 domain MF133_03040 PF00121 Triosephosphate isomerase MF133_03045 PF00365 Phosphofructokinase MF133_03050 PF07687 Peptidase dimerisation domain MF133_03050 PF01546 Peptidase family M20/M25/M40 MF133_03055 PF13419 Haloacid dehalogenase-like hydrolase MF133_03060 PF00883 Cytosol aminopeptidase family, catalytic domain MF133_03060 PF02789 Cytosol aminopeptidase family, N-terminal domain MF133_03105 PF11398 Protein of unknown function (DUF2813) MF133_03120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_03120 PF03466 LysR substrate binding domain MF133_03125 PF01925 Sulfite exporter TauE/SafE MF133_03150 PF03942 DTW domain MF133_03155 PF07478 D-ala D-ala ligase C-terminus MF133_03155 PF01820 D-ala D-ala ligase N-terminus MF133_03165 PF00255 Glutathione peroxidase MF133_03170 PF00270 DEAD/DEAH box helicase MF133_03170 PF00271 Helicase conserved C-terminal domain MF133_03175 PF13673 Acetyltransferase (GNAT) domain MF133_03185 PF02694 Uncharacterised BCR, YnfA/UPF0060 family MF133_03195 PF01928 CYTH domain MF133_03205 PF13673 Acetyltransferase (GNAT) domain MF133_03210 PF03992 Antibiotic biosynthesis monooxygenase MF133_03215 PF08543 Phosphomethylpyrimidine kinase MF133_03235 PF00561 alpha/beta hydrolase fold MF133_03235 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus MF133_03240 PF01575 MaoC like domain MF133_03265 PF00664 ABC transporter transmembrane region MF133_03265 PF00005 ABC transporter MF133_03270 PF00664 ABC transporter transmembrane region MF133_03270 PF00005 ABC transporter MF133_03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_03275 PF00672 HAMP domain MF133_03275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MF133_03275 PF00512 His Kinase A (phospho-acceptor) domain MF133_03275 PF01627 Hpt domain MF133_03275 PF00072 Response regulator receiver domain MF133_03280 PF00085 Thioredoxin MF133_03285 PF00939 Sodium:sulfate symporter transmembrane region MF133_03295 PF00343 Carbohydrate phosphorylase MF133_03315 PF04715 Anthranilate synthase component I, N terminal region MF133_03315 PF00425 chorismate binding enzyme MF133_03320 PF00293 NUDIX domain MF133_03325 PF03222 Tryptophan/tyrosine permease family MF133_03330 PF00375 Sodium:dicarboxylate symporter family MF133_03335 PF16124 RecQ zinc-binding MF133_03335 PF09382 RQC domain MF133_03335 PF00271 Helicase conserved C-terminal domain MF133_03335 PF00270 DEAD/DEAH box helicase MF133_03335 PF00570 HRDC domain MF133_03340 PF08298 PrkA AAA domain MF133_03340 PF06798 PrkA serine protein kinase C-terminal domain MF133_03345 PF04285 Protein of unknown function (DUF444) MF133_03350 PF04293 SpoVR like protein MF133_03355 PF07840 FadR C-terminal domain MF133_03355 PF00392 Bacterial regulatory proteins, gntR family MF133_03360 PF06450 Bacterial Na+/H+ antiporter B (NhaB) MF133_03365 PF02600 Disulfide bond formation protein DsbB MF133_03370 PF09335 SNARE associated Golgi protein MF133_03380 PF00271 Helicase conserved C-terminal domain MF133_03380 PF04851 Type III restriction enzyme, res subunit MF133_03380 PF02151 UvrB/uvrC motif MF133_03380 PF12344 Ultra-violet resistance protein B MF133_03380 PF17757 UvrB interaction domain MF133_03390 PF02080 TrkA-C domain MF133_03390 PF06826 Predicted Permease Membrane Region MF133_03395 PF01551 Peptidase family M23 MF133_03395 PF10145 Phage-related minor tail protein MF133_03395 PF01464 Transglycosylase SLT domain MF133_03400 PF03401 Tripartite tricarboxylate transporter family receptor MF133_03410 PF01970 Tripartite tricarboxylate transporter TctA family MF133_03415 PF00072 Response regulator receiver domain MF133_03420 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MF133_03420 PF17203 Single cache domain 3 MF133_03420 PF00989 PAS fold MF133_03420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_03425 PF01047 MarR family MF133_03425 PF00480 ROK family MF133_03430 PF17200 Single Cache domain 2 MF133_03430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_03430 PF00672 HAMP domain MF133_03435 PF02810 SEC-C motif MF133_03440 PF01266 FAD dependent oxidoreductase MF133_03440 PF04324 BFD-like [2Fe-2S] binding domain MF133_03445 PF00890 FAD binding domain MF133_03450 PF02754 Cysteine-rich domain MF133_03450 PF13183 4Fe-4S dicluster domain MF133_03465 PF02335 Cytochrome c552 MF133_03470 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) MF133_03470 PF13435 Cytochrome c554 and c-prime MF133_03475 PF13247 4Fe-4S dicluster domain MF133_03475 PF00037 4Fe-4S binding domain MF133_03480 PF03916 Polysulphide reductase, NrfD MF133_03485 PF01578 Cytochrome C assembly protein MF133_03485 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MF133_03490 PF08534 Redoxin MF133_03495 PF03918 Cytochrome C biogenesis protein MF133_03500 PF00768 D-alanyl-D-alanine carboxypeptidase MF133_03510 PF04244 Deoxyribodipyrimidine photo-lyase-related protein MF133_03515 PF01266 FAD dependent oxidoreductase MF133_03525 PF07969 Amidohydrolase family MF133_03530 PF01743 Poly A polymerase head domain MF133_03530 PF00571 CBS domain MF133_03540 PF01717 Cobalamin-independent synthase, Catalytic domain MF133_03540 PF08267 Cobalamin-independent synthase, N-terminal domain MF133_03545 PF03466 LysR substrate binding domain MF133_03545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_03555 PF07715 TonB-dependent Receptor Plug Domain MF133_03555 PF00593 TonB dependent receptor MF133_03565 PF00990 Diguanylate cyclase, GGDEF domain MF133_03565 PF17158 Membrane-associated sensor, integral membrane domain MF133_03570 PF00563 EAL domain MF133_03570 PF12792 CSS motif domain associated with EAL MF133_03575 PF02311 AraC-like ligand binding domain MF133_03575 PF12833 Helix-turn-helix domain MF133_03580 PF03466 LysR substrate binding domain MF133_03580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_03585 PF13460 NAD(P)H-binding MF133_03595 PF01053 Cys/Met metabolism PLP-dependent enzyme MF133_03600 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MF133_03600 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MF133_03635 PF00232 Glycosyl hydrolase family 1 MF133_03640 PF00367 phosphotransferase system, EIIB MF133_03640 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MF133_03640 PF02378 Phosphotransferase system, EIIC MF133_03645 PF01418 Helix-turn-helix domain, rpiR family MF133_03645 PF01380 SIS domain MF133_03660 PF10722 Putative bacterial sensory transduction regulator MF133_03670 PF00265 Thymidine kinase MF133_03675 PF03553 Na+/H+ antiporter family MF133_03680 PF00816 H-NS histone family MF133_03685 PF01923 Cobalamin adenosyltransferase MF133_03690 PF12843 Putative quorum-sensing-regulated virulence factor MF133_03695 PF04055 Radical SAM superfamily MF133_03700 PF06508 Queuosine biosynthesis protein QueC MF133_03715 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MF133_03720 PF18073 Rubredoxin metal binding domain MF133_03730 PF00216 Bacterial DNA-binding protein MF133_03735 PF00575 S1 RNA binding domain MF133_03740 PF02224 Cytidylate kinase MF133_03745 PF00925 GTP cyclohydrolase II MF133_03750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_03750 PF03466 LysR substrate binding domain MF133_03755 PF07690 Major Facilitator Superfamily MF133_03770 PF00881 Nitroreductase family MF133_03775 PF03806 AbgT putative transporter family MF133_03780 PF13188 PAS domain MF133_03780 PF00563 EAL domain MF133_03780 PF00990 Diguanylate cyclase, GGDEF domain MF133_03780 PF03707 Bacterial signalling protein N terminal repeat MF133_03795 PF00486 Transcriptional regulatory protein, C terminal MF133_03795 PF00072 Response regulator receiver domain MF133_03805 PF01212 Beta-eliminating lyase MF133_03820 PF00248 Aldo/keto reductase family MF133_03825 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MF133_03835 PF03411 Penicillin-insensitive murein endopeptidase MF133_03845 PF04536 TPM domain MF133_03860 PF01618 MotA/TolQ/ExbB proton channel family MF133_03865 PF00691 OmpA family MF133_03865 PF13677 Membrane MotB of proton-channel complex MotA/MotB MF133_03870 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MF133_03875 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MF133_03880 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MF133_03880 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MF133_03890 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MF133_03890 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MF133_03895 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MF133_03895 PF00384 Molybdopterin oxidoreductase MF133_03895 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MF133_03900 PF00146 NADH dehydrogenase MF133_03905 PF12838 4Fe-4S dicluster domain MF133_03910 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MF133_03915 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MF133_03920 PF00361 Proton-conducting membrane transporter MF133_03920 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MF133_03925 PF00361 Proton-conducting membrane transporter MF133_03930 PF00361 Proton-conducting membrane transporter MF133_03935 PF02769 AIR synthase related protein, C-terminal domain MF133_03935 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MF133_03935 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MF133_03940 PF00497 Bacterial extracellular solute-binding proteins, family 3 MF133_03940 PF01464 Transglycosylase SLT domain MF133_03945 PF07191 zinc-ribbons MF133_03950 PF01926 50S ribosome-binding GTPase MF133_03950 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MF133_03955 PF13360 PQQ-like domain MF133_03960 PF09976 Tetratricopeptide repeat-like domain MF133_03965 PF03129 Anticodon binding domain MF133_03965 PF13393 Histidyl-tRNA synthetase MF133_03970 PF04551 GcpE protein MF133_03975 PF13464 Domain of unknown function (DUF4115) MF133_03985 PF04055 Radical SAM superfamily MF133_03990 PF00334 Nucleoside diphosphate kinase MF133_03995 PF12404 Peptidase MF133_03995 PF00883 Cytosol aminopeptidase family, catalytic domain MF133_04000 PF12404 Peptidase MF133_04000 PF00883 Cytosol aminopeptidase family, catalytic domain MF133_04005 PF00111 2Fe-2S iron-sulfur cluster binding domain MF133_04010 PF00012 Hsp70 protein MF133_04015 PF07743 HSCB C-terminal oligomerisation domain MF133_04015 PF00226 DnaJ domain MF133_04020 PF01521 Iron-sulphur cluster biosynthesis MF133_04025 PF01592 NifU-like N terminal domain MF133_04030 PF00266 Aminotransferase class-V MF133_04035 PF02082 Transcriptional regulator MF133_04040 PF00588 SpoU rRNA Methylase family MF133_04045 PF02036 SCP-2 sterol transfer family MF133_04050 PF01136 Peptidase family U32 MF133_04055 PF01136 Peptidase family U32 MF133_04060 PF13181 Tetratricopeptide repeat MF133_04060 PF07719 Tetratricopeptide repeat MF133_04065 PF00581 Rhodanese-like domain MF133_04070 PF02355 Protein export membrane protein MF133_04070 PF07549 SecD/SecF GG Motif MF133_04075 PF02355 Protein export membrane protein MF133_04075 PF13721 SecD export protein N-terminal TM region MF133_04075 PF07549 SecD/SecF GG Motif MF133_04080 PF02699 Preprotein translocase subunit MF133_04085 PF01702 Queuine tRNA-ribosyltransferase MF133_04090 PF02547 Queuosine biosynthesis protein MF133_04095 PF00571 CBS domain MF133_04100 PF00578 AhpC/TSA family MF133_04100 PF10417 C-terminal domain of 1-Cys peroxiredoxin MF133_04105 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF133_04105 PF13192 Thioredoxin domain MF133_04110 PF07690 Major Facilitator Superfamily MF133_04120 PF08241 Methyltransferase domain MF133_04130 PF02347 Glycine cleavage system P-protein MF133_04135 PF01597 Glycine cleavage H-protein MF133_04140 PF01571 Aminomethyltransferase folate-binding domain MF133_04140 PF08669 Glycine cleavage T-protein C-terminal barrel domain MF133_04145 PF01494 FAD binding domain MF133_04150 PF01494 FAD binding domain MF133_04155 PF03695 Uncharacterised protein family (UPF0149) MF133_04160 PF05164 Cell division protein ZapA MF133_04170 PF07690 Major Facilitator Superfamily MF133_04175 PF00005 ABC transporter MF133_04175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MF133_04180 PF12911 N-terminal TM domain of oligopeptide transport permease C MF133_04180 PF00528 Binding-protein-dependent transport system inner membrane component MF133_04185 PF00528 Binding-protein-dependent transport system inner membrane component MF133_04195 PF00043 Glutathione S-transferase, C-terminal domain MF133_04195 PF02798 Glutathione S-transferase, N-terminal domain MF133_04200 PF02798 Glutathione S-transferase, N-terminal domain MF133_04200 PF00043 Glutathione S-transferase, C-terminal domain MF133_04210 PF00459 Inositol monophosphatase family MF133_04215 PF18393 MotY N-terminal domain MF133_04215 PF00691 OmpA family MF133_04220 PF00672 HAMP domain MF133_04220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_04220 PF12729 Four helix bundle sensory module for signal transduction MF133_04225 PF00929 Exonuclease MF133_04230 PF13726 Na+-H+ antiporter family MF133_04230 PF03553 Na+/H+ antiporter family MF133_04235 PF07690 Major Facilitator Superfamily MF133_04240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_04240 PF03466 LysR substrate binding domain MF133_04245 PF08448 PAS fold MF133_04245 PF00563 EAL domain MF133_04245 PF00990 Diguanylate cyclase, GGDEF domain MF133_04245 PF08447 PAS fold MF133_04255 PF03880 DbpA RNA binding domain MF133_04255 PF00270 DEAD/DEAH box helicase MF133_04255 PF00271 Helicase conserved C-terminal domain MF133_04260 PF03061 Thioesterase superfamily MF133_04270 PF02913 FAD linked oxidases, C-terminal domain MF133_04270 PF01565 FAD binding domain MF133_04270 PF13183 4Fe-4S dicluster domain MF133_04285 PF03471 Transporter associated domain MF133_04285 PF03741 Integral membrane protein TerC family MF133_04290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MF133_04295 PF08240 Alcohol dehydrogenase GroES-like domain MF133_04295 PF00107 Zinc-binding dehydrogenase MF133_04300 PF00962 Adenosine/AMP deaminase MF133_04305 PF13344 Haloacid dehalogenase-like hydrolase MF133_04310 PF02254 TrkA-N domain MF133_04310 PF00999 Sodium/hydrogen exchanger family MF133_04320 PF13537 Glutamine amidotransferase domain MF133_04320 PF00733 Asparagine synthase MF133_04335 PF02798 Glutathione S-transferase, N-terminal domain MF133_04335 PF14497 Glutathione S-transferase, C-terminal domain MF133_04345 PF04209 homogentisate 1,2-dioxygenase MF133_04360 PF00849 RNA pseudouridylate synthase MF133_04365 PF00990 Diguanylate cyclase, GGDEF domain MF133_04365 PF13426 PAS domain MF133_04365 PF00563 EAL domain MF133_04370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_04370 PF08447 PAS fold MF133_04380 PF00285 Citrate synthase, C-terminal domain MF133_04385 PF00330 Aconitase family (aconitate hydratase) MF133_04385 PF00694 Aconitase C-terminal domain MF133_04390 PF04303 PrpF protein MF133_04400 PF07715 TonB-dependent Receptor Plug Domain MF133_04400 PF07660 Secretin and TonB N terminus short domain MF133_04400 PF00593 TonB dependent receptor MF133_04410 PF01027 Inhibitor of apoptosis-promoting Bax1 MF133_04415 PF12805 FUSC-like inner membrane protein yccS MF133_04420 PF04358 DsrC like protein MF133_04425 PF05036 Sporulation related domain MF133_04430 PF08245 Mur ligase middle domain MF133_04430 PF02875 Mur ligase family, glutamate ligase domain MF133_04435 PF01039 Carboxyl transferase domain MF133_04435 PF17848 Acetyl-coA carboxylase zinc finger domain MF133_04440 PF01416 tRNA pseudouridine synthase MF133_04450 PF01118 Semialdehyde dehydrogenase, NAD binding domain MF133_04450 PF02774 Semialdehyde dehydrogenase, dimerisation domain MF133_04455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MF133_04455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MF133_04455 PF11890 Domain of unknown function (DUF3410) MF133_04465 PF03180 NLPA lipoprotein MF133_04490 PF00005 ABC transporter MF133_04495 PF02896 PEP-utilising enzyme, TIM barrel domain MF133_04495 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MF133_04495 PF00391 PEP-utilising enzyme, mobile domain MF133_04500 PF03618 Kinase/pyrophosphorylase MF133_04510 PF00324 Amino acid permease MF133_04605 PF00664 ABC transporter transmembrane region MF133_04605 PF00005 ABC transporter MF133_04605 PF03412 Peptidase C39 family MF133_04610 PF04055 Radical SAM superfamily MF133_04610 PF16199 Radical_SAM C-terminal domain MF133_04615 PF01493 GXGXG motif MF133_04615 PF01645 Conserved region in glutamate synthase MF133_04615 PF00310 Glutamine amidotransferases class-II MF133_04615 PF04898 Glutamate synthase central domain MF133_04620 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MF133_04620 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF133_04625 PF00005 ABC transporter MF133_04630 PF00528 Binding-protein-dependent transport system inner membrane component MF133_04635 PF00497 Bacterial extracellular solute-binding proteins, family 3 MF133_04660 PF14521 Lysine-specific metallo-endopeptidase MF133_04670 PF00271 Helicase conserved C-terminal domain MF133_04670 PF00270 DEAD/DEAH box helicase MF133_04690 PF07759 Protein of unknown function (DUF1615) MF133_04695 PF00990 Diguanylate cyclase, GGDEF domain MF133_04700 PF00682 HMGL-like MF133_04700 PF08502 LeuA allosteric (dimerisation) domain MF133_04705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MF133_04705 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MF133_04705 PF02142 MGS-like domain MF133_04710 PF00117 Glutamine amidotransferase class-I MF133_04710 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MF133_04715 PF01113 Dihydrodipicolinate reductase, N-terminus MF133_04715 PF05173 Dihydrodipicolinate reductase, C-terminus MF133_04725 PF01812 5-formyltetrahydrofolate cyclo-ligase family MF133_04730 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MF133_04735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MF133_04735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MF133_04735 PF01842 ACT domain MF133_04740 PF01219 Prokaryotic diacylglycerol kinase MF133_04745 PF00793 DAHP synthetase I family MF133_04750 PF00005 ABC transporter MF133_04755 PF01032 FecCD transport family MF133_04770 PF00437 Type II/IV secretion system protein MF133_04780 PF17910 FeoB cytosolic helical domain MF133_04780 PF02421 Ferrous iron transport protein B MF133_04780 PF07670 Nucleoside recognition MF133_04780 PF07664 Ferrous iron transport protein B C terminus MF133_04790 PF01253 Translation initiation factor SUI1 MF133_04795 PF01169 Uncharacterized protein family UPF0016 MF133_04830 PF13185 GAF domain MF133_04830 PF00990 Diguanylate cyclase, GGDEF domain MF133_04845 PF09190 DALR domain MF133_04845 PF01406 tRNA synthetases class I (C) catalytic domain MF133_04850 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MF133_04860 PF00149 Calcineurin-like phosphoesterase MF133_04865 PF04226 Transglycosylase associated protein MF133_04870 PF16925 Tetracyclin repressor-like, C-terminal domain MF133_04870 PF00440 Bacterial regulatory proteins, tetR family MF133_04875 PF08240 Alcohol dehydrogenase GroES-like domain MF133_04875 PF00107 Zinc-binding dehydrogenase MF133_04880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_04880 PF08447 PAS fold MF133_04880 PF13426 PAS domain MF133_04885 PF13784 Fic/DOC family N-terminal MF133_04885 PF02661 Fic/DOC family MF133_04935 PF01066 CDP-alcohol phosphatidyltransferase MF133_04940 PF08459 UvrC Helix-hairpin-helix N-terminal MF133_04940 PF02151 UvrB/uvrC motif MF133_04940 PF01541 GIY-YIG catalytic domain MF133_04945 PF00072 Response regulator receiver domain MF133_04945 PF00196 Bacterial regulatory proteins, luxR family MF133_04950 PF02348 Cytidylyltransferase MF133_04955 PF03966 Trm112p-like protein MF133_04960 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MF133_04965 PF00005 ABC transporter MF133_04965 PF00664 ABC transporter transmembrane region MF133_04970 PF03772 Competence protein MF133_04970 PF00753 Metallo-beta-lactamase superfamily MF133_04985 PF05872 Bacterial protein of unknown function (DUF853) MF133_04990 PF00155 Aminotransferase class I and II MF133_05000 PF13609 Gram-negative porin MF133_05005 PF06733 DEAD_2 MF133_05005 PF13307 Helicase C-terminal domain MF133_05015 PF00850 Histone deacetylase domain MF133_05020 PF07690 Major Facilitator Superfamily MF133_05025 PF01926 50S ribosome-binding GTPase MF133_05030 PF00245 Alkaline phosphatase MF133_05035 PF00245 Alkaline phosphatase MF133_05050 PF01272 Transcription elongation factor, GreA/GreB, C-term MF133_05050 PF14760 Rnk N-terminus MF133_05055 PF00990 Diguanylate cyclase, GGDEF domain MF133_05055 PF08448 PAS fold MF133_05060 PF00497 Bacterial extracellular solute-binding proteins, family 3 MF133_05065 PF00528 Binding-protein-dependent transport system inner membrane component MF133_05070 PF00005 ABC transporter MF133_05075 PF04116 Fatty acid hydroxylase superfamily MF133_05080 PF13520 Amino acid permease MF133_05085 PF02310 B12 binding domain MF133_05085 PF00809 Pterin binding enzyme MF133_05085 PF02965 Vitamin B12 dependent methionine synthase, activation domain MF133_05085 PF02574 Homocysteine S-methyltransferase MF133_05085 PF02607 B12 binding domain MF133_05095 PF00571 CBS domain MF133_05095 PF03471 Transporter associated domain MF133_05095 PF01595 Cyclin M transmembrane N-terminal domain MF133_05100 PF01895 PhoU domain MF133_05105 PF00005 ABC transporter MF133_05110 PF00528 Binding-protein-dependent transport system inner membrane component MF133_05115 PF00528 Binding-protein-dependent transport system inner membrane component MF133_05120 PF14437 MafB19-like deaminase MF133_05135 PF01274 Malate synthase MF133_05140 PF00463 Isocitrate lyase family MF133_05145 PF00308 Bacterial dnaA protein MF133_05160 PF00586 AIR synthase related protein, N-terminal domain MF133_05160 PF02769 AIR synthase related protein, C-terminal domain MF133_05165 PF00551 Formyl transferase MF133_05170 PF01784 NIF3 (NGG1p interacting factor 3) MF133_05175 PF00158 Sigma-54 interaction domain MF133_05175 PF02954 Bacterial regulatory protein, Fis family MF133_05175 PF00072 Response regulator receiver domain MF133_05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_05180 PF00512 His Kinase A (phospho-acceptor) domain MF133_05180 PF13188 PAS domain MF133_05185 PF06490 Flagellar regulatory protein FleQ MF133_05185 PF02954 Bacterial regulatory protein, Fis family MF133_05185 PF00158 Sigma-54 interaction domain MF133_05195 PF01842 ACT domain MF133_05200 PF02503 Polyphosphate kinase middle domain MF133_05200 PF13090 Polyphosphate kinase C-terminal domain 2 MF133_05200 PF17941 Polyphosphate kinase C-terminal domain 1 MF133_05200 PF13089 Polyphosphate kinase N-terminal domain MF133_05205 PF02541 Ppx/GppA phosphatase family MF133_05210 PF01769 Divalent cation transporter MF133_05210 PF00571 CBS domain MF133_05210 PF03448 MgtE intracellular N domain MF133_05220 PF07196 Flagellin hook IN motif MF133_05220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MF133_05225 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MF133_05225 PF10135 Rod binding protein MF133_05230 PF02119 Flagellar P-ring protein MF133_05235 PF02107 Flagellar L-ring protein MF133_05240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MF133_05240 PF00460 Flagella basal body rod protein MF133_05245 PF00460 Flagella basal body rod protein MF133_05245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MF133_05250 PF00460 Flagella basal body rod protein MF133_05250 PF07559 Flagellar basal body protein FlaE MF133_05250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MF133_05260 PF00460 Flagella basal body rod protein MF133_05260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MF133_05265 PF00460 Flagella basal body rod protein MF133_05270 PF03705 CheR methyltransferase, all-alpha domain MF133_05270 PF01739 CheR methyltransferase, SAM binding domain MF133_05275 PF00072 Response regulator receiver domain MF133_05275 PF01584 CheW-like domain MF133_05280 PF13144 Chaperone for flagella basal body P-ring formation MF133_05295 PF12850 Calcineurin-like phosphoesterase superfamily domain MF133_05300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MF133_05310 PF01479 S4 domain MF133_05310 PF00849 RNA pseudouridylate synthase MF133_05315 PF01966 HD domain MF133_05325 PF00892 EamA-like transporter family MF133_05330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MF133_05355 PF00313 'Cold-shock' DNA-binding domain MF133_05360 PF00364 Biotin-requiring enzyme MF133_05360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MF133_05360 PF02817 e3 binding domain MF133_05365 PF02780 Transketolase, C-terminal domain MF133_05365 PF02779 Transketolase, pyrimidine binding domain MF133_05370 PF00676 Dehydrogenase E1 component MF133_05375 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family MF133_05385 PF05472 DNA replication terminus site-binding protein (Ter protein) MF133_05390 PF04434 SWIM zinc finger MF133_05390 PF00176 SNF2 family N-terminal domain MF133_05390 PF00271 Helicase conserved C-terminal domain MF133_05395 PF04337 Protein of unknown function, DUF480 MF133_05405 PF02706 Chain length determinant protein MF133_05410 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MF133_05415 PF00483 Nucleotidyl transferase MF133_05420 PF04321 RmlD substrate binding domain MF133_05425 PF02397 Bacterial sugar transferase MF133_05435 PF00535 Glycosyl transferase family 2 MF133_05440 PF00534 Glycosyl transferases group 1 MF133_05450 PF07922 Glycosyltransferase family 52 MF133_05455 PF01943 Polysaccharide biosynthesis protein MF133_05470 PF02348 Cytidylyltransferase MF133_05475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MF133_05475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MF133_05480 PF00483 Nucleotidyl transferase MF133_05490 PF08666 SAF domain MF133_05490 PF03102 NeuB family MF133_05500 PF02350 UDP-N-acetylglucosamine 2-epimerase MF133_05510 PF01575 MaoC like domain MF133_05515 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MF133_05520 PF02719 Polysaccharide biosynthesis protein MF133_05525 PF16363 GDP-mannose 4,6 dehydratase MF133_05530 PF00072 Response regulator receiver domain MF133_05530 PF00486 Transcriptional regulatory protein, C terminal MF133_05535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_05540 PF02685 Glucokinase MF133_05545 PF01380 SIS domain MF133_05545 PF01418 Helix-turn-helix domain, rpiR family MF133_05550 PF02887 Pyruvate kinase, alpha/beta domain MF133_05550 PF00224 Pyruvate kinase, barrel domain MF133_05560 PF00873 AcrB/AcrD/AcrF family MF133_05565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MF133_05565 PF09317 Domain of unknown function (DUF1974) MF133_05565 PF02770 Acyl-CoA dehydrogenase, middle domain MF133_05565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MF133_05570 PF00440 Bacterial regulatory proteins, tetR family MF133_05590 PF02321 Outer membrane efflux protein MF133_05595 PF00873 AcrB/AcrD/AcrF family MF133_05600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MF133_05600 PF00529 HlyD membrane-fusion protein of T1SS MF133_05605 PF08361 MAATS-type transcriptional repressor, C-terminal region MF133_05605 PF00440 Bacterial regulatory proteins, tetR family MF133_05625 PF01479 S4 domain MF133_05625 PF00849 RNA pseudouridylate synthase MF133_05630 PF04079 Segregation and condensation complex subunit ScpB MF133_05635 PF02616 Segregation and condensation protein ScpA MF133_05640 PF01300 Telomere recombination MF133_05645 PF02811 PHP domain MF133_05650 PF04715 Anthranilate synthase component I, N terminal region MF133_05650 PF00425 chorismate binding enzyme MF133_05655 PF00591 Glycosyl transferase family, a/b domain MF133_05655 PF00117 Glutamine amidotransferase class-I MF133_05655 PF02885 Glycosyl transferase family, helical bundle domain MF133_05660 PF00591 Glycosyl transferase family, a/b domain MF133_05660 PF02885 Glycosyl transferase family, helical bundle domain MF133_05665 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MF133_05665 PF00218 Indole-3-glycerol phosphate synthase MF133_05670 PF00291 Pyridoxal-phosphate dependent enzyme MF133_05675 PF00290 Tryptophan synthase alpha chain MF133_05705 PF03466 LysR substrate binding domain MF133_05705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_05715 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MF133_05720 PF00005 ABC transporter MF133_05725 PF00528 Binding-protein-dependent transport system inner membrane component MF133_05730 PF02668 Taurine catabolism dioxygenase TauD, TfdA family MF133_05735 PF07237 Protein of unknown function (DUF1428) MF133_05740 PF07690 Major Facilitator Superfamily MF133_05745 PF01040 UbiA prenyltransferase family MF133_05750 PF03626 Prokaryotic Cytochrome C oxidase subunit IV MF133_05755 PF00510 Cytochrome c oxidase subunit III MF133_05760 PF00115 Cytochrome C and Quinol oxidase polypeptide I MF133_05765 PF06481 COX Aromatic Rich Motif MF133_05765 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MF133_05770 PF02627 Carboxymuconolactone decarboxylase family MF133_05775 PF03466 LysR substrate binding domain MF133_05775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_05785 PF01156 Inosine-uridine preferring nucleoside hydrolase MF133_05795 PF01047 MarR family MF133_05810 PF00127 Copper binding proteins, plastocyanin/azurin family MF133_05815 PF02424 ApbE family MF133_05820 PF00011 Hsp20/alpha crystallin family MF133_05825 PF00072 Response regulator receiver domain MF133_05835 PF03372 Endonuclease/Exonuclease/phosphatase family MF133_05845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MF133_05845 PF00529 HlyD membrane-fusion protein of T1SS MF133_05850 PF00873 AcrB/AcrD/AcrF family MF133_05865 PF03099 Biotin/lipoate A/B protein ligase family MF133_05865 PF10437 Bacterial lipoate protein ligase C-terminus MF133_05870 PF00990 Diguanylate cyclase, GGDEF domain MF133_05870 PF00563 EAL domain MF133_05870 PF03707 Bacterial signalling protein N terminal repeat MF133_05875 PF00873 AcrB/AcrD/AcrF family MF133_05890 PF04143 Sulphur transport MF133_05895 PF01022 Bacterial regulatory protein, arsR family MF133_05905 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF133_05915 PF02308 MgtC family MF133_05920 PF00356 Bacterial regulatory proteins, lacI family MF133_05920 PF13407 Periplasmic binding protein domain MF133_05925 PF08244 Glycosyl hydrolases family 32 C terminal MF133_05925 PF00251 Glycosyl hydrolases family 32 N-terminal domain MF133_05930 PF00367 phosphotransferase system, EIIB MF133_05930 PF02378 Phosphotransferase system, EIIC MF133_05935 PF00294 pfkB family carbohydrate kinase MF133_05940 PF11471 Maltoporin periplasmic N-terminal extension MF133_05940 PF02264 LamB porin MF133_05945 PF00684 DnaJ central domain MF133_05945 PF00226 DnaJ domain MF133_05945 PF01556 DnaJ C terminal domain MF133_05950 PF00012 Hsp70 protein MF133_05955 PF01025 GrpE MF133_05960 PF01513 ATP-NAD kinase MF133_05965 PF00990 Diguanylate cyclase, GGDEF domain MF133_05965 PF17158 Membrane-associated sensor, integral membrane domain MF133_05970 PF02463 RecF/RecN/SMC N terminal domain MF133_05980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MF133_05985 PF12704 MacB-like periplasmic core domain MF133_05985 PF02687 FtsX-like permease family MF133_05985 PF00005 ABC transporter MF133_05990 PF02321 Outer membrane efflux protein MF133_05995 PF04954 Siderophore-interacting protein MF133_05995 PF08021 Siderophore-interacting FAD-binding domain MF133_06000 PF00793 DAHP synthetase I family MF133_06005 PF00816 H-NS histone family MF133_06010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_06010 PF03466 LysR substrate binding domain MF133_06015 PF00291 Pyridoxal-phosphate dependent enzyme MF133_06025 PF00180 Isocitrate/isopropylmalate dehydrogenase MF133_06065 PF00583 Acetyltransferase (GNAT) family MF133_06070 PF00849 RNA pseudouridylate synthase MF133_06075 PF00293 NUDIX domain MF133_06085 PF04356 Protein of unknown function (DUF489) MF133_06090 PF08328 Adenylosuccinate lyase C-terminal MF133_06090 PF00206 Lyase MF133_06095 PF08007 Cupin superfamily protein MF133_06100 PF00224 Pyruvate kinase, barrel domain MF133_06100 PF02887 Pyruvate kinase, alpha/beta domain MF133_06105 PF12794 Mechanosensitive ion channel inner membrane domain 1 MF133_06105 PF12795 Mechanosensitive ion channel porin domain MF133_06105 PF00924 Mechanosensitive ion channel MF133_06110 PF01810 LysE type translocator MF133_06115 PF10282 Lactonase, 7-bladed beta-propeller MF133_06125 PF00860 Permease family MF133_06135 PF00390 Malic enzyme, N-terminal domain MF133_06135 PF03949 Malic enzyme, NAD binding domain MF133_06140 PF12804 MobA-like NTP transferase domain MF133_06145 PF03205 Molybdopterin guanine dinucleotide synthesis protein B MF133_06150 PF04632 Fusaric acid resistance protein family MF133_06165 PF13426 PAS domain MF133_06165 PF08447 PAS fold MF133_06165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_06185 PF05114 Protein of unknown function (DUF692) MF133_06195 PF02028 BCCT, betaine/carnitine/choline family transporter MF133_06225 PF14821 Threonine synthase N terminus MF133_06225 PF00291 Pyridoxal-phosphate dependent enzyme MF133_06230 PF00288 GHMP kinases N terminal domain MF133_06230 PF08544 GHMP kinases C terminal MF133_06235 PF01842 ACT domain MF133_06235 PF00696 Amino acid kinase family MF133_06235 PF13840 ACT domain MF133_06235 PF00742 Homoserine dehydrogenase MF133_06235 PF03447 Homoserine dehydrogenase, NAD binding domain MF133_06240 PF00588 SpoU rRNA Methylase family MF133_06245 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) MF133_06260 PF03737 Aldolase/RraA MF133_06270 PF00072 Response regulator receiver domain MF133_06270 PF00486 Transcriptional regulatory protein, C terminal MF133_06285 PF00664 ABC transporter transmembrane region MF133_06285 PF00005 ABC transporter MF133_06290 PF00664 ABC transporter transmembrane region MF133_06290 PF00005 ABC transporter MF133_06310 PF18389 TrmO C-terminal domain MF133_06310 PF01980 tRNA-methyltransferase O MF133_06315 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MF133_06315 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MF133_06325 PF17862 AAA+ lid domain MF133_06325 PF01434 Peptidase family M41 MF133_06325 PF00004 ATPase family associated with various cellular activities (AAA) MF133_06330 PF00291 Pyridoxal-phosphate dependent enzyme MF133_06335 PF00381 PTS HPr component phosphorylation site MF133_06340 PF00391 PEP-utilising enzyme, mobile domain MF133_06340 PF05524 PEP-utilising enzyme, N-terminal MF133_06340 PF02896 PEP-utilising enzyme, TIM barrel domain MF133_06345 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MF133_06350 PF01292 Prokaryotic cytochrome b561 MF133_06360 PF00149 Calcineurin-like phosphoesterase MF133_06360 PF12320 Type 5 capsule protein repressor C-terminal domain MF133_06370 PF04381 Putative exonuclease, RdgC MF133_06385 PF02254 TrkA-N domain MF133_06385 PF00999 Sodium/hydrogen exchanger family MF133_06390 PF00072 Response regulator receiver domain MF133_06390 PF02954 Bacterial regulatory protein, Fis family MF133_06390 PF00158 Sigma-54 interaction domain MF133_06420 PF01266 FAD dependent oxidoreductase MF133_06425 PF07883 Cupin domain MF133_06425 PF01381 Helix-turn-helix MF133_06430 PF00171 Aldehyde dehydrogenase family MF133_06435 PF00202 Aminotransferase class-III MF133_06445 PF00324 Amino acid permease MF133_06450 PF13520 Amino acid permease MF133_06460 PF02690 Na+/Pi-cotransporter MF133_06465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MF133_06465 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MF133_06470 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase MF133_06475 PF00497 Bacterial extracellular solute-binding proteins, family 3 MF133_06475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_06475 PF00072 Response regulator receiver domain MF133_06475 PF00512 His Kinase A (phospho-acceptor) domain MF133_06475 PF01627 Hpt domain MF133_06475 PF00989 PAS fold MF133_06480 PF10725 Protein of unknown function (DUF2517) MF133_06500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_06500 PF09308 LuxQ, periplasmic MF133_06500 PF00072 Response regulator receiver domain MF133_06500 PF00512 His Kinase A (phospho-acceptor) domain MF133_06510 PF03734 L,D-transpeptidase catalytic domain MF133_06510 PF01476 LysM domain MF133_06510 PF17969 L,D-transpeptidase C-terminal domain MF133_06520 PF01575 MaoC like domain MF133_06525 PF05971 RNA methyltransferase MF133_06530 PF00877 NlpC/P60 family MF133_06535 PF01648 4'-phosphopantetheinyl transferase superfamily MF133_06540 PF00085 Thioredoxin MF133_06550 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MF133_06555 PF00551 Formyl transferase MF133_06555 PF01842 ACT domain MF133_06565 PF13091 PLD-like domain MF133_06565 PF13396 Phospholipase_D-nuclease N-terminal MF133_06580 PF01464 Transglycosylase SLT domain MF133_06580 PF01551 Peptidase family M23 MF133_06580 PF10145 Phage-related minor tail protein MF133_06585 PF00230 Major intrinsic protein MF133_06590 PF02075 Crossover junction endodeoxyribonuclease RuvC MF133_06595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MF133_06625 PF08240 Alcohol dehydrogenase GroES-like domain MF133_06625 PF00107 Zinc-binding dehydrogenase MF133_06635 PF01979 Amidohydrolase family MF133_06640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_06640 PF03466 LysR substrate binding domain MF133_06645 PF11842 Domain of unknown function (DUF3362) MF133_06645 PF04055 Radical SAM superfamily MF133_06645 PF08497 Radical SAM N-terminal MF133_06650 PF00873 AcrB/AcrD/AcrF family MF133_06660 PF00990 Diguanylate cyclase, GGDEF domain MF133_06660 PF17158 Membrane-associated sensor, integral membrane domain MF133_06665 PF01734 Patatin-like phospholipase MF133_06670 PF00209 Sodium:neurotransmitter symporter family MF133_06685 PF00691 OmpA family MF133_06685 PF01389 OmpA-like transmembrane domain MF133_06690 PF00691 OmpA family MF133_06690 PF01389 OmpA-like transmembrane domain MF133_06695 PF00691 OmpA family MF133_06695 PF01389 OmpA-like transmembrane domain MF133_06700 PF00390 Malic enzyme, N-terminal domain MF133_06700 PF03949 Malic enzyme, NAD binding domain MF133_06705 PF12833 Helix-turn-helix domain MF133_06710 PF01554 MatE MF133_06715 PF10692 Protein of unknown function (DUF2498) MF133_06720 PF00990 Diguanylate cyclase, GGDEF domain MF133_06720 PF00072 Response regulator receiver domain MF133_06725 PF00860 Permease family MF133_06735 PF01235 Sodium:alanine symporter family MF133_06740 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MF133_06740 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MF133_06745 PF01699 Sodium/calcium exchanger protein MF133_06750 PF08534 Redoxin MF133_06755 PF00293 NUDIX domain MF133_06765 PF00005 ABC transporter MF133_06770 PF00528 Binding-protein-dependent transport system inner membrane component MF133_06775 PF00528 Binding-protein-dependent transport system inner membrane component MF133_06780 PF00497 Bacterial extracellular solute-binding proteins, family 3 MF133_06795 PF00005 ABC transporter MF133_06800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MF133_06800 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MF133_06830 PF03932 CutC family MF133_06835 PF00480 ROK family MF133_06845 PF01435 Peptidase family M48 MF133_06850 PF12849 PBP superfamily domain MF133_06865 PF00072 Response regulator receiver domain MF133_06865 PF00486 Transcriptional regulatory protein, C terminal MF133_06870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MF133_06875 PF07694 5TMR of 5TMR-LYT MF133_06875 PF00990 Diguanylate cyclase, GGDEF domain MF133_06880 PF01590 GAF domain MF133_06880 PF00158 Sigma-54 interaction domain MF133_06880 PF02954 Bacterial regulatory protein, Fis family MF133_06895 PF00892 EamA-like transporter family MF133_06905 PF00248 Aldo/keto reductase family MF133_06915 PF12431 Transcriptional regulator MF133_06915 PF00072 Response regulator receiver domain MF133_06920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_06920 PF00989 PAS fold MF133_06920 PF17203 Single cache domain 3 MF133_06920 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MF133_06925 PF01047 MarR family MF133_06930 PF00529 HlyD membrane-fusion protein of T1SS MF133_06930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MF133_06950 PF01679 Proteolipid membrane potential modulator MF133_06960 PF03477 ATP cone domain MF133_06960 PF13597 Anaerobic ribonucleoside-triphosphate reductase MF133_06970 PF00533 BRCA1 C Terminus (BRCT) domain MF133_06970 PF01653 NAD-dependent DNA ligase adenylation domain MF133_06970 PF12826 Helix-hairpin-helix motif MF133_06970 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MF133_06970 PF03120 NAD-dependent DNA ligase OB-fold domain MF133_06975 PF04354 ZipA, C-terminal FtsZ-binding domain MF133_06980 PF02463 RecF/RecN/SMC N terminal domain MF133_06980 PF06470 SMC proteins Flexible Hinge Domain MF133_06990 PF03458 UPF0126 domain MF133_07000 PF05951 Bacterial protein of unknown function (DUF882) MF133_07005 PF01471 Putative peptidoglycan binding domain MF133_07005 PF03734 L,D-transpeptidase catalytic domain MF133_07020 PF00535 Glycosyl transferase family 2 MF133_07035 PF00128 Alpha amylase, catalytic domain MF133_07045 PF00072 Response regulator receiver domain MF133_07045 PF00196 Bacterial regulatory proteins, luxR family MF133_07065 PF02254 TrkA-N domain MF133_07065 PF02080 TrkA-C domain MF133_07065 PF00999 Sodium/hydrogen exchanger family MF133_07070 PF00990 Diguanylate cyclase, GGDEF domain MF133_07075 PF11734 TilS substrate C-terminal domain MF133_07075 PF09179 TilS substrate binding domain MF133_07075 PF01171 PP-loop family MF133_07080 PF05649 Peptidase family M13 MF133_07080 PF01431 Peptidase family M13 MF133_07090 PF12848 ABC transporter MF133_07090 PF16326 ABC transporter C-terminal domain MF133_07090 PF00005 ABC transporter MF133_07100 PF13520 Amino acid permease MF133_07110 PF03466 LysR substrate binding domain MF133_07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_07120 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MF133_07125 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MF133_07125 PF14579 Helix-hairpin-helix motif MF133_07125 PF02811 PHP domain MF133_07125 PF01336 OB-fold nucleic acid binding domain MF133_07125 PF07733 Bacterial DNA polymerase III alpha NTPase domain MF133_07130 PF01351 Ribonuclease HII MF133_07135 PF02684 Lipid-A-disaccharide synthetase MF133_07140 PF00132 Bacterial transferase hexapeptide (six repeats) MF133_07140 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MF133_07145 PF07977 FabA-like domain MF133_07150 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MF133_07150 PF00132 Bacterial transferase hexapeptide (six repeats) MF133_07155 PF03938 Outer membrane protein (OmpH-like) MF133_07160 PF07244 Surface antigen variable number repeat MF133_07160 PF01103 Surface antigen MF133_07165 PF17820 PDZ domain MF133_07165 PF02163 Peptidase family M50 MF133_07170 PF13288 DXP reductoisomerase C-terminal domain MF133_07170 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MF133_07170 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MF133_07180 PF01255 Putative undecaprenyl diphosphate synthase MF133_07185 PF01765 Ribosome recycling factor MF133_07190 PF00696 Amino acid kinase family MF133_07195 PF00889 Elongation factor TS MF133_07200 PF00318 Ribosomal protein S2 MF133_07205 PF00557 Metallopeptidase family M24 MF133_07210 PF01966 HD domain MF133_07210 PF01842 ACT domain MF133_07210 PF08335 GlnD PII-uridylyltransferase MF133_07210 PF01909 Nucleotidyltransferase domain MF133_07215 PF00132 Bacterial transferase hexapeptide (six repeats) MF133_07215 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MF133_07215 PF14602 Hexapeptide repeat of succinyl-transferase MF133_07220 PF11944 Protein of unknown function (DUF3461) MF133_07225 PF00367 phosphotransferase system, EIIB MF133_07225 PF02378 Phosphotransferase system, EIIC MF133_07230 PF07148 Maltose operon periplasmic protein precursor (MalM) MF133_07235 PF02264 LamB porin MF133_07245 PF00258 Flavodoxin MF133_07250 PF00849 RNA pseudouridylate synthase MF133_07255 PF04287 tRNA pseudouridine synthase C MF133_07280 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) MF133_07285 PF07348 Syd protein (SUKH-2) MF133_07290 PF14489 QueF-like protein MF133_07290 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term MF133_07300 PF00990 Diguanylate cyclase, GGDEF domain MF133_07305 PF03641 Possible lysine decarboxylase MF133_07305 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases MF133_07305 PF11892 Domain of unknown function (DUF3412) MF133_07310 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MF133_07310 PF01367 5'-3' exonuclease, C-terminal SAM fold MF133_07315 PF00180 Isocitrate/isopropylmalate dehydrogenase MF133_07315 PF18324 Hypothetical protein TT1725 MF133_07325 PF18125 RlmM ferredoxin-like domain MF133_07325 PF01728 FtsJ-like methyltransferase MF133_07340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_07340 PF03466 LysR substrate binding domain MF133_07345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_07345 PF00672 HAMP domain MF133_07350 PF11799 impB/mucB/samB family C-terminal domain MF133_07350 PF11798 IMS family HHH motif MF133_07350 PF00817 impB/mucB/samB family MF133_07365 PF02424 ApbE family MF133_07370 PF00970 Oxidoreductase FAD-binding domain MF133_07370 PF00111 2Fe-2S iron-sulfur cluster binding domain MF133_07370 PF00175 Oxidoreductase NAD-binding domain MF133_07375 PF02508 Rnf-Nqr subunit, membrane protein MF133_07380 PF02508 Rnf-Nqr subunit, membrane protein MF133_07385 PF04205 FMN-binding domain MF133_07390 PF03116 NQR2, RnfD, RnfE family MF133_07395 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) MF133_07395 PF11973 NQRA C-terminal domain MF133_07400 PF01722 BolA-like protein MF133_07405 PF05175 Methyltransferase small domain MF133_07415 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MF133_07425 PF07690 Major Facilitator Superfamily MF133_07430 PF03502 Nucleoside-specific channel-forming protein, Tsx MF133_07435 PF04461 Protein of unknown function (DUF520) MF133_07440 PF02558 Ketopantoate reductase PanE/ApbA MF133_07440 PF08546 Ketopantoate reductase PanE/ApbA C terminal MF133_07445 PF01965 DJ-1/PfpI family MF133_07480 PF13503 Domain of unknown function (DUF4123) MF133_07485 PF04717 Type VI secretion system, phage-baseplate injector MF133_07495 PF05638 Type VI secretion system effector, Hcp MF133_07500 PF03472 Autoinducer binding domain MF133_07500 PF00196 Bacterial regulatory proteins, luxR family MF133_07505 PF01740 STAS domain MF133_07505 PF00916 Sulfate permease family MF133_07510 PF00672 HAMP domain MF133_07510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_07510 PF00512 His Kinase A (phospho-acceptor) domain MF133_07515 PF00072 Response regulator receiver domain MF133_07515 PF00486 Transcriptional regulatory protein, C terminal MF133_07520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MF133_07520 PF00529 HlyD membrane-fusion protein of T1SS MF133_07545 PF00356 Bacterial regulatory proteins, lacI family MF133_07550 PF13416 Bacterial extracellular solute-binding protein MF133_07555 PF12729 Four helix bundle sensory module for signal transduction MF133_07555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_07555 PF00672 HAMP domain MF133_07560 PF14310 Fibronectin type III-like domain MF133_07560 PF00933 Glycosyl hydrolase family 3 N terminal domain MF133_07560 PF01915 Glycosyl hydrolase family 3 C-terminal domain MF133_07565 PF02018 Carbohydrate binding domain MF133_07565 PF02927 Cellulase N-terminal ig-like domain MF133_07565 PF00404 Dockerin type I domain MF133_07565 PF00759 Glycosyl hydrolase family 9 MF133_07570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MF133_07575 PF02378 Phosphotransferase system, EIIC MF133_07575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MF133_07580 PF00232 Glycosyl hydrolase family 1 MF133_07585 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit MF133_07590 PF00722 Glycosyl hydrolases family 16 MF133_07605 PF16363 GDP-mannose 4,6 dehydratase MF133_07610 PF00111 2Fe-2S iron-sulfur cluster binding domain MF133_07610 PF00175 Oxidoreductase NAD-binding domain MF133_07610 PF00970 Oxidoreductase FAD-binding domain MF133_07615 PF03063 Prismane/CO dehydrogenase family MF133_07620 PF00210 Ferritin-like domain MF133_07660 PF00106 short chain dehydrogenase MF133_07670 PF00875 DNA photolyase MF133_07670 PF03441 FAD binding domain of DNA photolyase MF133_07675 PF13411 MerR HTH family regulatory protein MF133_07680 PF08349 Protein of unknown function (DUF1722) MF133_07705 PF01817 Chorismate mutase type II MF133_07705 PF00800 Prephenate dehydratase MF133_07730 PF00529 HlyD membrane-fusion protein of T1SS MF133_07730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MF133_07735 PF00664 ABC transporter transmembrane region MF133_07735 PF00005 ABC transporter MF133_07750 PF13181 Tetratricopeptide repeat MF133_07760 PF03976 Polyphosphate kinase 2 (PPK2) MF133_07770 PF00455 DeoR C terminal sensor domain MF133_07770 PF08220 DeoR-like helix-turn-helix domain MF133_07775 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MF133_07775 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MF133_07780 PF07005 Sugar-binding N-terminal domain MF133_07780 PF17042 Nucleotide-binding C-terminal domain MF133_07785 PF00596 Class II Aldolase and Adducin N-terminal domain MF133_07790 PF01261 Xylose isomerase-like TIM barrel MF133_07795 PF01370 NAD dependent epimerase/dehydratase family MF133_07800 PF02447 GntP family permease MF133_07810 PF02743 Cache domain MF133_07810 PF00672 HAMP domain MF133_07810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_07820 PF03573 outer membrane porin, OprD family MF133_07825 PF00106 short chain dehydrogenase MF133_07850 PF02074 Carboxypeptidase Taq (M32) metallopeptidase MF133_07855 PF12833 Helix-turn-helix domain MF133_07855 PF06029 AlkA N-terminal domain MF133_07855 PF00730 HhH-GPD superfamily base excision DNA repair protein MF133_07855 PF02805 Metal binding domain of Ada MF133_07860 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MF133_07860 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MF133_07870 PF06906 Protein of unknown function (DUF1272) MF133_07880 PF12392 Collagenase MF133_07880 PF01136 Peptidase family U32 MF133_07885 PF01810 LysE type translocator MF133_07890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_07890 PF03466 LysR substrate binding domain MF133_07895 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MF133_07895 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MF133_07920 PF00989 PAS fold MF133_07920 PF00563 EAL domain MF133_07920 PF01590 GAF domain MF133_07920 PF00990 Diguanylate cyclase, GGDEF domain MF133_07930 PF01568 Molydopterin dinucleotide binding domain MF133_07930 PF00384 Molybdopterin oxidoreductase MF133_07930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MF133_07935 PF03916 Polysulphide reductase, NrfD MF133_07940 PF13247 4Fe-4S dicluster domain MF133_07945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_07945 PF00512 His Kinase A (phospho-acceptor) domain MF133_07945 PF00989 PAS fold MF133_07950 PF00196 Bacterial regulatory proteins, luxR family MF133_07950 PF00072 Response regulator receiver domain MF133_07955 PF03575 Peptidase family S51 MF133_07960 PF07690 Major Facilitator Superfamily MF133_07965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MF133_07965 PF00529 HlyD membrane-fusion protein of T1SS MF133_07975 PF10415 Fumarase C C-terminus MF133_07975 PF00206 Lyase MF133_07985 PF00171 Aldehyde dehydrogenase family MF133_07985 PF01619 Proline dehydrogenase MF133_07985 PF14850 DNA-binding domain of Proline dehydrogenase MF133_07985 PF18327 Proline utilization A proline dehydrogenase N-terminal domain MF133_07990 PF00842 Alanine racemase, C-terminal domain MF133_07990 PF01168 Alanine racemase, N-terminal domain MF133_07995 PF00772 DnaB-like helicase N terminal domain MF133_07995 PF03796 DnaB-like helicase C terminal domain MF133_08005 PF02872 5'-nucleotidase, C-terminal domain MF133_08005 PF00149 Calcineurin-like phosphoesterase MF133_08040 PF04102 SlyX MF133_08045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MF133_08050 PF09526 Probable metal-binding protein (DUF2387) MF133_08060 PF00072 Response regulator receiver domain MF133_08060 PF01584 CheW-like domain MF133_08065 PF00561 alpha/beta hydrolase fold MF133_08070 PF00563 EAL domain MF133_08070 PF01590 GAF domain MF133_08070 PF00990 Diguanylate cyclase, GGDEF domain MF133_08070 PF00360 Phytochrome region MF133_08075 PF06794 Uncharacterised protein family (UPF0270) MF133_08080 PF00485 Phosphoribulokinase / Uridine kinase family MF133_08095 PF02566 OsmC-like protein MF133_08100 PF13545 Crp-like helix-turn-helix domain MF133_08100 PF00027 Cyclic nucleotide-binding domain MF133_08105 PF13847 Methyltransferase domain MF133_08110 PF00704 Glycosyl hydrolases family 18 MF133_08110 PF08329 Chitinase A, N-terminal domain MF133_08115 PF00512 His Kinase A (phospho-acceptor) domain MF133_08115 PF02702 Osmosensitive K+ channel His kinase sensor domain MF133_08115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_08115 PF13492 GAF domain MF133_08115 PF13493 Domain of unknown function (DUF4118) MF133_08120 PF12832 MFS_1 like family MF133_08125 PF00593 TonB dependent receptor MF133_08125 PF07715 TonB-dependent Receptor Plug Domain MF133_08145 PF01243 Pyridoxamine 5'-phosphate oxidase MF133_08150 PF06228 Haem utilisation ChuX/HutX MF133_08160 PF01032 FecCD transport family MF133_08165 PF00005 ABC transporter MF133_08175 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MF133_08175 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MF133_08175 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MF133_08180 PF01370 NAD dependent epimerase/dehydratase family MF133_08185 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase MF133_08200 PF01464 Transglycosylase SLT domain MF133_08205 PF12848 ABC transporter MF133_08205 PF00005 ABC transporter MF133_08215 PF00860 Permease family MF133_08220 PF00226 DnaJ domain MF133_08220 PF05099 Tellurite resistance protein TerB MF133_08225 PF00483 Nucleotidyl transferase MF133_08230 PF01636 Phosphotransferase enzyme family MF133_08235 PF03968 OstA-like protein MF133_08235 PF04453 LPS transport system D MF133_08240 PF09312 SurA N-terminal domain MF133_08240 PF00639 PPIC-type PPIASE domain MF133_08245 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MF133_08250 PF00398 Ribosomal RNA adenine dimethylase MF133_08255 PF04379 ApaG domain MF133_08260 PF00149 Calcineurin-like phosphoesterase MF133_08270 PF00296 Luciferase-like monooxygenase MF133_08280 PF07670 Nucleoside recognition MF133_08285 PF01018 GTP1/OBG MF133_08285 PF01926 50S ribosome-binding GTPase MF133_08290 PF01016 Ribosomal L27 protein MF133_08295 PF00829 Ribosomal prokaryotic L21 protein MF133_08300 PF00348 Polyprenyl synthetase MF133_08305 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) MF133_08310 PF01145 SPFH domain / Band 7 family MF133_08315 PF01145 SPFH domain / Band 7 family MF133_08315 PF12221 Bacterial membrane protein N terminal MF133_08320 PF16360 GTP-binding GTPase Middle Region MF133_08320 PF13167 GTP-binding GTPase N-terminal MF133_08320 PF01926 50S ribosome-binding GTPase MF133_08325 PF17209 Hfq protein MF133_08335 PF08676 MutL C terminal dimerisation domain MF133_08335 PF01119 DNA mismatch repair protein, C-terminal domain MF133_08340 PF01520 N-acetylmuramoyl-L-alanine amidase MF133_08345 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MF133_08350 PF03853 YjeF-related protein N-terminus MF133_08350 PF01256 Carbohydrate kinase MF133_08355 PF08331 Domain of unknown function (DUF1730) MF133_08360 PF00480 ROK family MF133_08370 PF00005 ABC transporter MF133_08370 PF09383 NIL domain MF133_08375 PF00528 Binding-protein-dependent transport system inner membrane component MF133_08380 PF03180 NLPA lipoprotein MF133_08385 PF02357 Transcription termination factor nusG MF133_08390 PF13426 PAS domain MF133_08390 PF08447 PAS fold MF133_08390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_08395 PF00563 EAL domain MF133_08395 PF00990 Diguanylate cyclase, GGDEF domain MF133_08395 PF03707 Bacterial signalling protein N terminal repeat MF133_08400 PF00512 His Kinase A (phospho-acceptor) domain MF133_08400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_08400 PF09456 RcsC Alpha-Beta-Loop (ABL) MF133_08400 PF00072 Response regulator receiver domain MF133_08410 PF01966 HD domain MF133_08415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_08415 PF00512 His Kinase A (phospho-acceptor) domain MF133_08415 PF18415 Histidine kinase receptor ArcB trans-membrane domain MF133_08415 PF01627 Hpt domain MF133_08415 PF00989 PAS fold MF133_08415 PF00072 Response regulator receiver domain MF133_08435 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) MF133_08440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_08440 PF03466 LysR substrate binding domain MF133_08450 PF01259 SAICAR synthetase MF133_08455 PF06804 NlpB/DapX lipoprotein MF133_08460 PF00701 Dihydrodipicolinate synthetase family MF133_08465 PF01842 ACT domain MF133_08470 PF00578 AhpC/TSA family MF133_08475 PF03887 YfbU domain MF133_08480 PF04217 Protein of unknown function, DUF412 MF133_08485 PF00871 Acetokinase family MF133_08490 PF01515 Phosphate acetyl/butaryl transferase MF133_08490 PF07085 DRTGG domain MF133_08495 PF10369 Small subunit of acetolactate synthase MF133_08500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MF133_08500 PF00205 Thiamine pyrophosphate enzyme, central domain MF133_08500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MF133_08515 PF01569 PAP2 superfamily MF133_08525 PF00682 HMGL-like MF133_08525 PF08502 LeuA allosteric (dimerisation) domain MF133_08530 PF00180 Isocitrate/isopropylmalate dehydrogenase MF133_08535 PF00330 Aconitase family (aconitate hydratase) MF133_08540 PF00694 Aconitase C-terminal domain MF133_08560 PF00528 Binding-protein-dependent transport system inner membrane component MF133_08565 PF00005 ABC transporter MF133_08575 PF02562 PhoH-like protein MF133_08575 PF13638 PIN domain MF133_08585 PF02867 Ribonucleotide reductase, barrel domain MF133_08585 PF00317 Ribonucleotide reductase, all-alpha domain MF133_08585 PF08343 Ribonucleotide reductase N-terminal MF133_08615 PF01521 Iron-sulphur cluster biosynthesis MF133_08625 PF00654 Voltage gated chloride channel MF133_08630 PF00202 Aminotransferase class-III MF133_08645 PF01569 PAP2 superfamily MF133_08655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_08655 PF03466 LysR substrate binding domain MF133_08660 PF00893 Small Multidrug Resistance protein MF133_08665 PF00893 Small Multidrug Resistance protein MF133_08670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MF133_08675 PF14814 Bifunctional transglycosylase second domain MF133_08675 PF00905 Penicillin binding protein transpeptidase domain MF133_08675 PF00912 Transglycosylase MF133_08680 PF00270 DEAD/DEAH box helicase MF133_08680 PF04408 Helicase associated domain (HA2) MF133_08680 PF00271 Helicase conserved C-terminal domain MF133_08680 PF08482 ATP-dependent helicase C-terminal MF133_08690 PF03749 Sugar fermentation stimulation protein RE domain MF133_08690 PF17746 SfsA N-terminal OB domain MF133_08695 PF01258 Prokaryotic dksA/traR C4-type zinc finger MF133_08700 PF00749 tRNA synthetases class I (E and Q), catalytic domain MF133_08705 PF12627 Probable RNA and SrmB- binding site of polymerase A MF133_08705 PF01743 Poly A polymerase head domain MF133_08705 PF12626 Polymerase A arginine-rich C-terminus MF133_08710 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MF133_08720 PF02569 Pantoate-beta-alanine ligase MF133_08730 PF01061 ABC-2 type transporter MF133_08735 PF00005 ABC transporter MF133_08740 PF00156 Phosphoribosyl transferase domain MF133_08745 PF00440 Bacterial regulatory proteins, tetR family MF133_08750 PF02441 Flavoprotein MF133_08755 PF01225 Mur ligase family, catalytic domain MF133_08755 PF02875 Mur ligase family, glutamate ligase domain MF133_08755 PF08245 Mur ligase middle domain MF133_08760 PF00719 Inorganic pyrophosphatase MF133_08775 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) MF133_08790 PF00005 ABC transporter MF133_08810 PF00672 HAMP domain MF133_08810 PF12729 Four helix bundle sensory module for signal transduction MF133_08810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_08830 PF03600 Citrate transporter MF133_08830 PF02080 TrkA-C domain MF133_08835 PF00009 Elongation factor Tu GTP binding domain MF133_08840 PF01507 Phosphoadenosine phosphosulfate reductase family MF133_08845 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MF133_08845 PF14824 Sirohaem biosynthesis protein central MF133_08845 PF10414 Sirohaem synthase dimerisation region MF133_08850 PF01145 SPFH domain / Band 7 family MF133_08850 PF16200 C-terminal region of band_7 MF133_08855 PF01957 NfeD-like C-terminal, partner-binding MF133_08865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MF133_08865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MF133_08870 PF07690 Major Facilitator Superfamily MF133_08875 PF01725 Ham1 family MF133_08880 PF04055 Radical SAM superfamily MF133_08880 PF06969 HemN C-terminal domain MF133_08885 PF03889 Alternative ribosome-rescue factor A MF133_08895 PF13411 MerR HTH family regulatory protein MF133_08900 PF01808 AICARFT/IMPCHase bienzyme MF133_08900 PF02142 MGS-like domain MF133_08905 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MF133_08905 PF02843 Phosphoribosylglycinamide synthetase, C domain MF133_08905 PF02844 Phosphoribosylglycinamide synthetase, N domain MF133_08920 PF00128 Alpha amylase, catalytic domain MF133_08980 PF00140 Sigma-70 factor, region 1.2 MF133_08980 PF04542 Sigma-70 region 2 MF133_08980 PF04546 Sigma-70, non-essential region MF133_08980 PF04539 Sigma-70 region 3 MF133_08980 PF04545 Sigma-70, region 4 MF133_08980 PF03979 Sigma-70 factor, region 1.1 MF133_08985 PF01807 CHC2 zinc finger MF133_08985 PF08275 DNA primase catalytic core, N-terminal domain MF133_08985 PF10410 DnaB-helicase binding domain of primase MF133_08985 PF08278 DNA primase DnaG DnaB-binding MF133_08990 PF09424 Yqey-like protein MF133_08995 PF01165 Ribosomal protein S21 MF133_09000 PF00814 Glycoprotease family MF133_09005 PF04545 Sigma-70, region 4 MF133_09005 PF04539 Sigma-70 region 3 MF133_09005 PF04542 Sigma-70 region 2 MF133_09005 PF00140 Sigma-70 factor, region 1.2 MF133_09010 PF01551 Peptidase family M23 MF133_09010 PF01476 LysM domain MF133_09015 PF09335 SNARE associated Golgi protein MF133_09025 PF01975 Survival protein SurE MF133_09030 PF01142 tRNA pseudouridine synthase D (TruD) MF133_09035 PF02542 YgbB family MF133_09040 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MF133_09045 PF04977 Septum formation initiator MF133_09050 PF03952 Enolase, N-terminal domain MF133_09050 PF00113 Enolase, C-terminal TIM barrel domain MF133_09055 PF06418 CTP synthase N-terminus MF133_09055 PF00117 Glutamine amidotransferase class-I MF133_09060 PF03819 MazG nucleotide pyrophosphohydrolase domain MF133_09065 PF04607 Region found in RelA / SpoT proteins MF133_09065 PF13291 ACT domain MF133_09065 PF02824 TGS domain MF133_09070 PF01938 TRAM domain MF133_09070 PF05958 tRNA (Uracil-5-)-methyltransferase MF133_09075 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MF133_09075 PF00072 Response regulator receiver domain MF133_09075 PF01627 Hpt domain MF133_09075 PF00512 His Kinase A (phospho-acceptor) domain MF133_09075 PF00672 HAMP domain MF133_09075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_09080 PF07308 Protein of unknown function (DUF1456) MF133_09085 PF01510 N-acetylmuramoyl-L-alanine amidase MF133_09090 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MF133_09095 PF02565 Recombination protein O C terminal MF133_09095 PF11967 Recombination protein O N terminal MF133_09100 PF01926 50S ribosome-binding GTPase MF133_09100 PF07650 KH domain MF133_09105 PF14622 Ribonuclease-III-like MF133_09105 PF00035 Double-stranded RNA binding motif MF133_09110 PF10502 Signal peptidase, peptidase S26 MF133_09115 PF00009 Elongation factor Tu GTP binding domain MF133_09115 PF00679 Elongation factor G C-terminus MF133_09115 PF03144 Elongation factor Tu domain 2 MF133_09115 PF06421 GTP-binding protein LepA C-terminus MF133_09125 PF17188 MucB/RseB C-terminal domain MF133_09125 PF03888 MucB/RseB N-terminal domain MF133_09130 PF03872 Anti sigma-E protein RseA, N-terminal domain MF133_09130 PF03873 Anti sigma-E protein RseA, C-terminal domain MF133_09135 PF08281 Sigma-70, region 4 MF133_09135 PF04542 Sigma-70 region 2 MF133_09140 PF00890 FAD binding domain MF133_09140 PF02910 Fumarate reductase flavoprotein C-term MF133_09150 PF03937 Flavinator of succinate dehydrogenase MF133_09155 PF01571 Aminomethyltransferase folate-binding domain MF133_09160 PF03466 LysR substrate binding domain MF133_09160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_09175 PF03091 CutA1 divalent ion tolerance protein MF133_09180 PF11412 Disulphide bond corrector protein DsbC MF133_09180 PF02683 Cytochrome C biogenesis protein transmembrane region MF133_09190 PF01266 FAD dependent oxidoreductase MF133_09195 PF01116 Fructose-bisphosphate aldolase class-II MF133_09200 PF00162 Phosphoglycerate kinase MF133_09205 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MF133_09205 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MF133_09210 PF00480 ROK family MF133_09215 PF01208 Uroporphyrinogen decarboxylase (URO-D) MF133_09220 PF00293 NUDIX domain MF133_09220 PF09297 NADH pyrophosphatase zinc ribbon domain MF133_09225 PF08239 Bacterial SH3 domain MF133_09230 PF00027 Cyclic nucleotide-binding domain MF133_09230 PF00520 Ion transport protein MF133_09235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_09235 PF02743 Cache domain MF133_09235 PF00672 HAMP domain MF133_09245 PF08335 GlnD PII-uridylyltransferase MF133_09245 PF03710 Glutamate-ammonia ligase adenylyltransferase MF133_09260 PF00326 Prolyl oligopeptidase family MF133_09260 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MF133_09265 PF00291 Pyridoxal-phosphate dependent enzyme MF133_09270 PF00528 Binding-protein-dependent transport system inner membrane component MF133_09275 PF00528 Binding-protein-dependent transport system inner membrane component MF133_09280 PF00005 ABC transporter MF133_09285 PF00497 Bacterial extracellular solute-binding proteins, family 3 MF133_09290 PF13194 Domain of unknown function (DUF4010) MF133_09295 PF12464 Maltose acetyltransferase MF133_09295 PF14602 Hexapeptide repeat of succinyl-transferase MF133_09325 PF14552 Tautomerase enzyme MF133_09335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_09335 PF03466 LysR substrate binding domain MF133_09340 PF14698 Argininosuccinate lyase C-terminal MF133_09340 PF00206 Lyase MF133_09345 PF00764 Arginosuccinate synthase MF133_09350 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MF133_09350 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MF133_09355 PF00696 Amino acid kinase family MF133_09360 PF02774 Semialdehyde dehydrogenase, dimerisation domain MF133_09360 PF01118 Semialdehyde dehydrogenase, NAD binding domain MF133_09365 PF01546 Peptidase family M20/M25/M40 MF133_09365 PF07687 Peptidase dimerisation domain MF133_09370 PF00311 Phosphoenolpyruvate carboxylase MF133_09375 PF00990 Diguanylate cyclase, GGDEF domain MF133_09380 PF04073 Aminoacyl-tRNA editing domain MF133_09400 PF00155 Aminotransferase class I and II MF133_09400 PF00392 Bacterial regulatory proteins, gntR family MF133_09415 PF03466 LysR substrate binding domain MF133_09415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_09420 PF03788 LrgA family MF133_09425 PF04172 LrgB-like family MF133_09430 PF03447 Homoserine dehydrogenase, NAD binding domain MF133_09430 PF00742 Homoserine dehydrogenase MF133_09430 PF00696 Amino acid kinase family MF133_09435 PF01053 Cys/Met metabolism PLP-dependent enzyme MF133_09440 PF01340 Met Apo-repressor, MetJ MF133_09450 PF01588 Putative tRNA binding domain MF133_09455 PF03222 Tryptophan/tyrosine permease family MF133_09460 PF00459 Inositol monophosphatase family MF133_09465 PF00293 NUDIX domain MF133_09470 PF13419 Haloacid dehalogenase-like hydrolase MF133_09475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MF133_09480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_09480 PF03466 LysR substrate binding domain MF133_09485 PF01479 S4 domain MF133_09485 PF00579 tRNA synthetases class I (W and Y) MF133_09490 PF00196 Bacterial regulatory proteins, luxR family MF133_09495 PF01203 Type II secretion system (T2SS), protein N MF133_09500 PF04612 Type II secretion system (T2SS), protein M MF133_09505 PF12693 GspL periplasmic domain MF133_09505 PF05134 Type II secretion system (T2SS), protein L MF133_09510 PF03934 Type II secretion system (T2SS), protein K MF133_09520 PF07963 Prokaryotic N-terminal methylation motif MF133_09520 PF11612 Type II secretion system (T2SS), protein J MF133_09525 PF07963 Prokaryotic N-terminal methylation motif MF133_09525 PF02501 Type II secretion system (T2SS), protein I MF133_09530 PF07963 Prokaryotic N-terminal methylation motif MF133_09530 PF12019 Type II transport protein GspH MF133_09535 PF08334 Type II secretion system (T2SS), protein G MF133_09535 PF07963 Prokaryotic N-terminal methylation motif MF133_09540 PF00482 Type II secretion system (T2SS), protein F MF133_09545 PF00437 Type II/IV secretion system protein MF133_09550 PF00263 Bacterial type II and III secretion system protein MF133_09550 PF03958 Bacterial type II/III secretion system short domain MF133_09555 PF11356 Type II secretion system protein C MF133_09560 PF01479 S4 domain MF133_09565 PF01430 Hsp33 protein MF133_09570 PF01293 Phosphoenolpyruvate carboxykinase MF133_09575 PF00392 Bacterial regulatory proteins, gntR family MF133_09580 PF01321 Creatinase/Prolidase N-terminal domain MF133_09580 PF00557 Metallopeptidase family M24 MF133_09585 PF00583 Acetyltransferase (GNAT) family MF133_09590 PF05433 Glycine zipper 2TM domain MF133_09595 PF01928 CYTH domain MF133_09600 PF01865 Protein of unknown function DUF47 MF133_09605 PF01384 Phosphate transporter family MF133_09610 PF01966 HD domain MF133_09610 PF12627 Probable RNA and SrmB- binding site of polymerase A MF133_09610 PF01743 Poly A polymerase head domain MF133_09615 PF01471 Putative peptidoglycan binding domain MF133_09615 PF13401 AAA domain MF133_09620 PF16537 Type II secretion system protein B MF133_09625 PF10576 Iron-sulfur binding domain of endonuclease III MF133_09625 PF00633 Helix-hairpin-helix motif MF133_09625 PF00730 HhH-GPD superfamily base excision DNA repair protein MF133_09625 PF14815 NUDIX domain MF133_09630 PF04362 Bacterial Fe(2+) trafficking MF133_09635 PF01464 Transglycosylase SLT domain MF133_09635 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain MF133_09645 PF00657 GDSL-like Lipase/Acylhydrolase MF133_09650 PF00691 OmpA family MF133_09650 PF01389 OmpA-like transmembrane domain MF133_09655 PF03886 ABC-type transport auxiliary lipoprotein component MF133_09660 PF02470 MlaD protein MF133_09665 PF04403 Paraquat-inducible protein A MF133_09670 PF17209 Hfq protein MF133_09675 PF13419 Haloacid dehalogenase-like hydrolase MF133_09680 PF00563 EAL domain MF133_09680 PF01590 GAF domain MF133_09680 PF00990 Diguanylate cyclase, GGDEF domain MF133_09680 PF00360 Phytochrome region MF133_09685 PF00701 Dihydrodipicolinate synthetase family MF133_09690 PF05175 Methyltransferase small domain MF133_09690 PF08468 Methyltransferase small domain N-terminal MF133_09695 PF00483 Nucleotidyl transferase MF133_09700 PF08323 Starch synthase catalytic domain MF133_09700 PF00534 Glycosyl transferases group 1 MF133_09740 PF03553 Na+/H+ antiporter family MF133_09745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_09745 PF03466 LysR substrate binding domain MF133_09750 PF13416 Bacterial extracellular solute-binding protein MF133_09755 PF00005 ABC transporter MF133_09755 PF08402 TOBE domain MF133_09760 PF00528 Binding-protein-dependent transport system inner membrane component MF133_09765 PF00528 Binding-protein-dependent transport system inner membrane component MF133_09770 PF00171 Aldehyde dehydrogenase family MF133_09775 PF01040 UbiA prenyltransferase family MF133_09800 PF00510 Cytochrome c oxidase subunit III MF133_09805 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 MF133_09810 PF00115 Cytochrome C and Quinol oxidase polypeptide I MF133_09815 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MF133_09815 PF02790 Cytochrome C oxidase subunit II, transmembrane domain MF133_09820 PF08351 Domain of unknown function (DUF1726) MF133_09820 PF13718 GNAT acetyltransferase 2 MF133_09820 PF05127 Helicase MF133_09820 PF17176 tRNA-binding domain MF133_09835 PF00210 Ferritin-like domain MF133_09840 PF02142 MGS-like domain MF133_09855 PF17763 Glutaminase/Asparaginase C-terminal domain MF133_09855 PF00710 Asparaginase, N-terminal MF133_09865 PF00356 Bacterial regulatory proteins, lacI family MF133_09875 PF00480 ROK family MF133_09880 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit MF133_09885 PF00232 Glycosyl hydrolase family 1 MF133_09890 PF02378 Phosphotransferase system, EIIC MF133_09890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MF133_09895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MF133_09900 PF02378 Phosphotransferase system, EIIC MF133_09905 PF01238 Phosphomannose isomerase type I MF133_09915 PF00356 Bacterial regulatory proteins, lacI family MF133_09920 PF00367 phosphotransferase system, EIIB MF133_09920 PF02378 Phosphotransferase system, EIIC MF133_09925 PF00128 Alpha amylase, catalytic domain MF133_09925 PF11941 Domain of unknown function (DUF3459) MF133_09930 PF12464 Maltose acetyltransferase MF133_09930 PF14602 Hexapeptide repeat of succinyl-transferase MF133_09935 PF01037 Lrp/AsnC ligand binding domain MF133_09940 PF00892 EamA-like transporter family MF133_09985 PF02660 Glycerol-3-phosphate acyltransferase MF133_09990 PF02152 Dihydroneopterin aldolase MF133_09995 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MF133_10005 PF07690 Major Facilitator Superfamily MF133_10010 PF02492 CobW/HypB/UreG, nucleotide-binding domain MF133_10010 PF07683 Cobalamin synthesis protein cobW C-terminal domain MF133_10015 PF04030 D-arabinono-1,4-lactone oxidase MF133_10015 PF01565 FAD binding domain MF133_10025 PF03466 LysR substrate binding domain MF133_10025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_10030 PF00563 EAL domain MF133_10030 PF12792 CSS motif domain associated with EAL MF133_10035 PF06434 Aconitate hydratase 2 N-terminus MF133_10035 PF00330 Aconitase family (aconitate hydratase) MF133_10035 PF11791 Aconitate B N-terminal domain MF133_10040 PF01734 Patatin-like phospholipase MF133_10045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_10045 PF00672 HAMP domain MF133_10045 PF12729 Four helix bundle sensory module for signal transduction MF133_10050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_10050 PF12729 Four helix bundle sensory module for signal transduction MF133_10050 PF00672 HAMP domain MF133_10060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MF133_10060 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF133_10065 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MF133_10065 PF02817 e3 binding domain MF133_10065 PF00364 Biotin-requiring enzyme MF133_10070 PF17831 Pyruvate dehydrogenase E1 component middle domain MF133_10070 PF00456 Transketolase, thiamine diphosphate binding domain MF133_10075 PF00392 Bacterial regulatory proteins, gntR family MF133_10075 PF07729 FCD domain MF133_10080 PF01510 N-acetylmuramoyl-L-alanine amidase MF133_10090 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain MF133_10090 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain MF133_10095 PF07963 Prokaryotic N-terminal methylation motif MF133_10100 PF00437 Type II/IV secretion system protein MF133_10100 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MF133_10105 PF00482 Type II secretion system (T2SS), protein F MF133_10110 PF06750 Bacterial Peptidase A24 N-terminal domain MF133_10110 PF01478 Type IV leader peptidase family MF133_10115 PF01121 Dephospho-CoA kinase MF133_10120 PF07072 Cell division protein MF133_10125 PF03884 DNA gyrase inhibitor YacG MF133_10130 PF00293 NUDIX domain MF133_10140 PF01043 SecA preprotein cross-linking domain MF133_10140 PF07516 SecA Wing and Scaffold domain MF133_10140 PF02810 SEC-C motif MF133_10140 PF07517 SecA DEAD-like domain MF133_10150 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MF133_10155 PF00091 Tubulin/FtsZ family, GTPase domain MF133_10155 PF12327 FtsZ family, C-terminal domain MF133_10160 PF02491 SHS2 domain inserted in FTSA MF133_10165 PF08478 POTRA domain, FtsQ-type MF133_10165 PF03799 Cell division protein FtsQ MF133_10170 PF01225 Mur ligase family, catalytic domain MF133_10170 PF08245 Mur ligase middle domain MF133_10170 PF02875 Mur ligase family, glutamate ligase domain MF133_10175 PF04101 Glycosyltransferase family 28 C-terminal domain MF133_10175 PF03033 Glycosyltransferase family 28 N-terminal domain MF133_10180 PF01098 Cell cycle protein MF133_10185 PF08245 Mur ligase middle domain MF133_10185 PF02875 Mur ligase family, glutamate ligase domain MF133_10190 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MF133_10190 PF00953 Glycosyl transferase family 4 MF133_10195 PF08245 Mur ligase middle domain MF133_10195 PF02875 Mur ligase family, glutamate ligase domain MF133_10195 PF01225 Mur ligase family, catalytic domain MF133_10200 PF01225 Mur ligase family, catalytic domain MF133_10200 PF02875 Mur ligase family, glutamate ligase domain MF133_10200 PF08245 Mur ligase middle domain MF133_10205 PF03717 Penicillin-binding Protein dimerisation domain MF133_10205 PF00905 Penicillin binding protein transpeptidase domain MF133_10210 PF04999 Cell division protein FtsL MF133_10215 PF01795 MraW methylase family MF133_10220 PF02381 MraZ protein, putative antitoxin-like MF133_10230 PF01464 Transglycosylase SLT domain MF133_10230 PF01476 LysM domain MF133_10240 PF13677 Membrane MotB of proton-channel complex MotA/MotB MF133_10240 PF00691 OmpA family MF133_10245 PF01618 MotA/TolQ/ExbB proton channel family MF133_10250 PF04542 Sigma-70 region 2 MF133_10250 PF04545 Sigma-70, region 4 MF133_10270 PF02561 Flagellar protein FliS MF133_10275 PF07196 Flagellin hook IN motif MF133_10275 PF07195 Flagellar hook-associated protein 2 C-terminus MF133_10275 PF02465 Flagellar hook-associated protein 2 N-terminus MF133_10280 PF00700 Bacterial flagellin C-terminal helical region MF133_10280 PF00669 Bacterial flagellin N-terminal helical region MF133_10285 PF00700 Bacterial flagellin C-terminal helical region MF133_10285 PF00669 Bacterial flagellin N-terminal helical region MF133_10300 PF00669 Bacterial flagellin N-terminal helical region MF133_10305 PF00460 Flagella basal body rod protein MF133_10305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MF133_10315 PF02119 Flagellar P-ring protein MF133_10320 PF02107 Flagellar L-ring protein MF133_10325 PF00460 Flagella basal body rod protein MF133_10325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MF133_10330 PF00460 Flagella basal body rod protein MF133_10330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MF133_10335 PF07559 Flagellar basal body protein FlaE MF133_10335 PF00460 Flagella basal body rod protein MF133_10335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MF133_10340 PF03963 Flagellar hook capping protein - N-terminal region MF133_10340 PF13860 FlgD Ig-like domain MF133_10340 PF13861 FlgD Tudor-like domain MF133_10345 PF00460 Flagella basal body rod protein MF133_10345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MF133_10350 PF00460 Flagella basal body rod protein MF133_10355 PF13144 Chaperone for flagella basal body P-ring formation MF133_10375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MF133_10375 PF18269 T3SS EscN ATPase C-terminal domain MF133_10385 PF14841 FliG middle domain MF133_10385 PF14842 FliG N-terminal domain MF133_10385 PF01706 FliG C-terminal domain MF133_10390 PF08345 Flagellar M-ring protein C-terminal MF133_10390 PF01514 Secretory protein of YscJ/FliF family MF133_10395 PF02049 Flagellar hook-basal body complex protein FliE MF133_10400 PF00158 Sigma-54 interaction domain MF133_10400 PF00072 Response regulator receiver domain MF133_10400 PF02954 Bacterial regulatory protein, Fis family MF133_10405 PF00771 FHIPEP family MF133_10410 PF01312 FlhB HrpN YscU SpaS Family MF133_10415 PF01311 Bacterial export proteins, family 1 MF133_10420 PF01313 Bacterial export proteins, family 3 MF133_10425 PF00813 FliP family MF133_10430 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MF133_10445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MF133_10450 PF04348 LppC putative lipoprotein MF133_10455 PF02021 Uncharacterised protein family UPF0102 MF133_10460 PF13580 SIS domain MF133_10465 PF04972 BON domain MF133_10470 PF04386 Stringent starvation protein B MF133_10475 PF02798 Glutathione S-transferase, N-terminal domain MF133_10475 PF00043 Glutathione S-transferase, C-terminal domain MF133_10480 PF02167 Cytochrome C1 family MF133_10485 PF00032 Cytochrome b(C-terminal)/b6/petD MF133_10485 PF00033 Cytochrome b/b6/petB MF133_10490 PF00355 Rieske [2Fe-2S] domain MF133_10490 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal MF133_10495 PF00380 Ribosomal protein S9/S16 MF133_10500 PF00572 Ribosomal protein L13 MF133_10505 PF03969 AFG1-like ATPase MF133_10515 PF13180 PDZ domain MF133_10515 PF00595 PDZ domain MF133_10520 PF13180 PDZ domain MF133_10550 PF01979 Amidohydrolase family MF133_10555 PF03841 L-seryl-tRNA selenium transferase MF133_10560 PF07071 KDGP aldolase MF133_10565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MF133_10565 PF02378 Phosphotransferase system, EIIC MF133_10565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MF133_10570 PF00381 PTS HPr component phosphorylation site MF133_10575 PF03668 P-loop ATPase protein family MF133_10580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MF133_10585 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MF133_10590 PF00309 Sigma-54 factor, Activator interacting domain (AID) MF133_10590 PF04963 Sigma-54 factor, core binding domain MF133_10590 PF04552 Sigma-54, DNA binding domain MF133_10595 PF00005 ABC transporter MF133_10595 PF12399 Branched-chain amino acid ATP-binding cassette transporter MF133_10600 PF03968 OstA-like protein MF133_10615 PF01380 SIS domain MF133_10615 PF00571 CBS domain MF133_10620 PF00005 ABC transporter MF133_10625 PF02405 Permease MlaE MF133_10630 PF02470 MlaD protein MF133_10635 PF05494 MlaC protein MF133_10645 PF01722 BolA-like protein MF133_10650 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MF133_10655 PF01523 Putative modulator of DNA gyrase MF133_10660 PF04751 Protein of unknown function (DUF615) MF133_10670 PF04363 Protein of unknown function (DUF496) MF133_10700 PF01381 Helix-turn-helix MF133_10700 PF07883 Cupin domain MF133_10705 PF03594 Benzoate membrane transport protein MF133_10715 PF02219 Methylenetetrahydrofolate reductase MF133_10730 PF12729 Four helix bundle sensory module for signal transduction MF133_10730 PF00672 HAMP domain MF133_10730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_10735 PF03922 OmpW family MF133_10740 PF17760 UvrA interaction domain MF133_10740 PF00005 ABC transporter MF133_10740 PF17755 UvrA DNA-binding domain MF133_10745 PF00196 Bacterial regulatory proteins, luxR family MF133_10750 PF00436 Single-strand binding protein family MF133_10765 PF00313 'Cold-shock' DNA-binding domain MF133_10770 PF00672 HAMP domain MF133_10770 PF00512 His Kinase A (phospho-acceptor) domain MF133_10770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_10775 PF00072 Response regulator receiver domain MF133_10775 PF00486 Transcriptional regulatory protein, C terminal MF133_10785 PF00672 HAMP domain MF133_10785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_10795 PF08448 PAS fold MF133_10795 PF00990 Diguanylate cyclase, GGDEF domain MF133_10800 PF00543 Nitrogen regulatory protein P-II MF133_10805 PF00909 Ammonium Transporter Family MF133_10815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MF133_10825 PF13614 AAA domain MF133_10830 PF13538 UvrD-like helicase C-terminal domain MF133_10835 PF00580 UvrD/REP helicase N-terminal domain MF133_10835 PF12705 PD-(D/E)XK nuclease superfamily MF133_10835 PF13361 UvrD-like helicase C-terminal domain MF133_10840 PF17946 RecC C-terminal domain MF133_10845 PF07681 DoxX MF133_10850 PF02678 Pirin MF133_10850 PF17954 Quercetinase C-terminal cupin domain MF133_10860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_10860 PF03466 LysR substrate binding domain MF133_10870 PF00392 Bacterial regulatory proteins, gntR family MF133_10870 PF07702 UTRA domain MF133_10885 PF00528 Binding-protein-dependent transport system inner membrane component MF133_10895 PF08402 TOBE domain MF133_10895 PF00005 ABC transporter MF133_10905 PF00990 Diguanylate cyclase, GGDEF domain MF133_10905 PF00072 Response regulator receiver domain MF133_10925 PF00583 Acetyltransferase (GNAT) family MF133_10930 PF06628 Catalase-related immune-responsive MF133_10930 PF00199 Catalase MF133_10960 PF01594 AI-2E family transporter MF133_10965 PF00106 short chain dehydrogenase MF133_10970 PF04371 Porphyromonas-type peptidyl-arginine deiminase MF133_10975 PF13416 Bacterial extracellular solute-binding protein MF133_10980 PF00795 Carbon-nitrogen hydrolase MF133_10985 PF04371 Porphyromonas-type peptidyl-arginine deiminase MF133_10990 PF03466 LysR substrate binding domain MF133_10990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_10995 PF02954 Bacterial regulatory protein, Fis family MF133_10995 PF00989 PAS fold MF133_10995 PF00158 Sigma-54 interaction domain MF133_11000 PF00381 PTS HPr component phosphorylation site MF133_11000 PF05524 PEP-utilising enzyme, N-terminal MF133_11000 PF03610 PTS system fructose IIA component MF133_11000 PF00391 PEP-utilising enzyme, mobile domain MF133_11005 PF02734 DAK2 domain MF133_11010 PF02733 Dak1 domain MF133_11015 PF00860 Permease family MF133_11020 PF03079 ARD/ARD' family MF133_11060 PF00009 Elongation factor Tu GTP binding domain MF133_11060 PF03144 Elongation factor Tu domain 2 MF133_11060 PF03143 Elongation factor Tu C-terminal domain MF133_11065 PF00679 Elongation factor G C-terminus MF133_11065 PF14492 Elongation Factor G, domain II MF133_11065 PF03764 Elongation factor G, domain IV MF133_11065 PF03144 Elongation factor Tu domain 2 MF133_11065 PF00009 Elongation factor Tu GTP binding domain MF133_11070 PF00177 Ribosomal protein S7p/S5e MF133_11075 PF00164 Ribosomal protein S12/S23 MF133_11080 PF04077 DsrH like protein MF133_11085 PF02635 DsrE/DsrF-like family MF133_11090 PF02635 DsrE/DsrF-like family MF133_11095 PF01042 Endoribonuclease L-PSP MF133_11100 PF13309 HTH domain MF133_11100 PF08348 YheO-like PAS domain MF133_11105 PF04998 RNA polymerase Rpb1, domain 5 MF133_11105 PF05000 RNA polymerase Rpb1, domain 4 MF133_11105 PF04983 RNA polymerase Rpb1, domain 3 MF133_11105 PF00623 RNA polymerase Rpb1, domain 2 MF133_11105 PF04997 RNA polymerase Rpb1, domain 1 MF133_11110 PF04563 RNA polymerase beta subunit MF133_11110 PF04561 RNA polymerase Rpb2, domain 2 MF133_11110 PF04565 RNA polymerase Rpb2, domain 3 MF133_11110 PF10385 RNA polymerase beta subunit external 1 domain MF133_11110 PF00562 RNA polymerase Rpb2, domain 6 MF133_11110 PF04560 RNA polymerase Rpb2, domain 7 MF133_11115 PF16320 Ribosomal protein L7/L12 dimerisation domain MF133_11115 PF00542 Ribosomal protein L7/L12 C-terminal domain MF133_11120 PF00466 Ribosomal protein L10 MF133_11125 PF00687 Ribosomal protein L1p/L10e family MF133_11130 PF00298 Ribosomal protein L11, RNA binding domain MF133_11130 PF03946 Ribosomal protein L11, N-terminal domain MF133_11135 PF02357 Transcription termination factor nusG MF133_11135 PF00467 KOW motif MF133_11140 PF00584 SecE/Sec61-gamma subunits of protein translocation complex MF133_11150 PF03143 Elongation factor Tu C-terminal domain MF133_11150 PF00009 Elongation factor Tu GTP binding domain MF133_11150 PF03144 Elongation factor Tu domain 2 MF133_11165 PF00485 Phosphoribulokinase / Uridine kinase family MF133_11170 PF03099 Biotin/lipoate A/B protein ligase family MF133_11170 PF08279 HTH domain MF133_11170 PF02237 Biotin protein ligase C terminal domain MF133_11175 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MF133_11175 PF01565 FAD binding domain MF133_11180 PF02254 TrkA-N domain MF133_11180 PF02080 TrkA-C domain MF133_11185 PF02386 Cation transport protein MF133_11190 PF01131 DNA topoisomerase MF133_11190 PF01751 Toprim domain MF133_11195 PF03264 NapC/NirT cytochrome c family, N-terminal region MF133_11200 PF01568 Molydopterin dinucleotide binding domain MF133_11200 PF18364 Molybdopterin oxidoreductase N-terminal domain MF133_11200 PF00384 Molybdopterin oxidoreductase MF133_11210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_11215 PF00486 Transcriptional regulatory protein, C terminal MF133_11215 PF00072 Response regulator receiver domain MF133_11230 PF01794 Ferric reductase like transmembrane component MF133_11235 PF00174 Oxidoreductase molybdopterin binding domain MF133_11240 PF06496 Protein of unknown function (DUF1097) MF133_11245 PF00072 Response regulator receiver domain MF133_11245 PF00158 Sigma-54 interaction domain MF133_11255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_11255 PF00512 His Kinase A (phospho-acceptor) domain MF133_11275 PF00571 CBS domain MF133_11275 PF00478 IMP dehydrogenase / GMP reductase domain MF133_11285 PF01037 Lrp/AsnC ligand binding domain MF133_11290 PF03590 Aspartate-ammonia ligase MF133_11300 PF00004 ATPase family associated with various cellular activities (AAA) MF133_11300 PF07724 AAA domain (Cdc48 subfamily) MF133_11300 PF17871 AAA lid domain MF133_11300 PF02861 Clp amino terminal domain, pathogenicity island component MF133_11300 PF10431 C-terminal, D2-small domain, of ClpB protein MF133_11305 PF02578 Multi-copper polyphenol oxidoreductase laccase MF133_11310 PF00849 RNA pseudouridylate synthase MF133_11310 PF01479 S4 domain MF133_11315 PF13525 Outer membrane lipoprotein MF133_11320 PF03313 Serine dehydratase alpha chain MF133_11325 PF13309 HTH domain MF133_11325 PF08348 YheO-like PAS domain MF133_11330 PF02233 NAD(P) transhydrogenase beta subunit MF133_11335 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MF133_11335 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MF133_11335 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch MF133_11340 PF00465 Iron-containing alcohol dehydrogenase MF133_11345 PF06719 AraC-type transcriptional regulator N-terminus MF133_11345 PF12833 Helix-turn-helix domain MF133_11350 PF08212 Lipocalin-like domain MF133_11360 PF02743 Cache domain MF133_11360 PF00672 HAMP domain MF133_11360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_11385 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MF133_11385 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MF133_11390 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain MF133_11390 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain MF133_11395 PF02863 Arginine repressor, C-terminal domain MF133_11395 PF01316 Arginine repressor, DNA binding domain MF133_11400 PF03606 C4-dicarboxylate anaerobic carrier MF133_11405 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MF133_11405 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MF133_11410 PF00696 Amino acid kinase family MF133_11425 PF02743 Cache domain MF133_11425 PF00672 HAMP domain MF133_11425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_11430 PF02653 Branched-chain amino acid transport system / permease component MF133_11435 PF00005 ABC transporter MF133_11440 PF13407 Periplasmic binding protein domain MF133_11445 PF02929 Beta galactosidase small chain MF133_11445 PF16353 Domain of unknown function(DUF4981) MF133_11445 PF02837 Glycosyl hydrolases family 2, sugar binding domain MF133_11445 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MF133_11445 PF00703 Glycosyl hydrolases family 2 MF133_11450 PF00356 Bacterial regulatory proteins, lacI family MF133_11455 PF16363 GDP-mannose 4,6 dehydratase MF133_11460 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain MF133_11460 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain MF133_11465 PF00288 GHMP kinases N terminal domain MF133_11465 PF08544 GHMP kinases C terminal MF133_11465 PF10509 Galactokinase galactose-binding signature MF133_11470 PF01263 Aldose 1-epimerase MF133_11475 PF00248 Aldo/keto reductase family MF133_11480 PF02673 Bacitracin resistance protein BacA MF133_11485 PF12973 ChrR Cupin-like domain MF133_11490 PF04542 Sigma-70 region 2 MF133_11490 PF04545 Sigma-70, region 4 MF133_11500 PF03485 Arginyl tRNA synthetase N terminal domain MF133_11500 PF05746 DALR anticodon binding domain MF133_11500 PF00750 tRNA synthetases class I (R) MF133_11510 PF00227 Proteasome subunit MF133_11515 PF00004 ATPase family associated with various cellular activities (AAA) MF133_11515 PF07724 AAA domain (Cdc48 subfamily) MF133_11515 PF10431 C-terminal, D2-small domain, of ClpB protein MF133_11520 PF07690 Major Facilitator Superfamily MF133_11535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MF133_11540 PF00005 ABC transporter MF133_11555 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF133_11555 PF18267 Rubredoxin NAD+ reductase C-terminal domain MF133_11555 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MF133_11555 PF04324 BFD-like [2Fe-2S] binding domain MF133_11555 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MF133_11560 PF13806 Rieske-like [2Fe-2S] domain MF133_11565 PF01226 Formate/nitrite transporter MF133_11570 PF10414 Sirohaem synthase dimerisation region MF133_11570 PF14824 Sirohaem biosynthesis protein central MF133_11570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MF133_11575 PF03448 MgtE intracellular N domain MF133_11575 PF01769 Divalent cation transporter MF133_11575 PF00571 CBS domain MF133_11580 PF03737 Aldolase/RraA MF133_11585 PF02592 Putative vitamin uptake transporter MF133_11595 PF02696 Uncharacterized ACR, YdiU/UPF0061 family MF133_11600 PF00034 Cytochrome c MF133_11605 PF00270 DEAD/DEAH box helicase MF133_11605 PF00271 Helicase conserved C-terminal domain MF133_11605 PF00570 HRDC domain MF133_11605 PF16124 RecQ zinc-binding MF133_11605 PF09382 RQC domain MF133_11610 PF03061 Thioesterase superfamily MF133_11625 PF03475 3-alpha domain MF133_11625 PF03473 MOSC domain MF133_11630 PF00528 Binding-protein-dependent transport system inner membrane component MF133_11635 PF00528 Binding-protein-dependent transport system inner membrane component MF133_11640 PF08402 TOBE domain MF133_11640 PF00005 ABC transporter MF133_11645 PF13416 Bacterial extracellular solute-binding protein MF133_11650 PF13416 Bacterial extracellular solute-binding protein MF133_11655 PF00202 Aminotransferase class-III MF133_11660 PF00120 Glutamine synthetase, catalytic domain MF133_11665 PF01258 Prokaryotic dksA/traR C4-type zinc finger MF133_11680 PF05981 CreA protein MF133_11685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MF133_11685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MF133_11690 PF00012 Hsp70 protein MF133_11705 PF00128 Alpha amylase, catalytic domain MF133_11705 PF02903 Alpha amylase, N-terminal ig-like domain MF133_11715 PF09940 Domain of unknown function (DUF2172) MF133_11715 PF16254 Domain of unknown function (DUF4910) MF133_11715 PF16221 winged helix-turn-helix MF133_11750 PF05958 tRNA (Uracil-5-)-methyltransferase MF133_11755 PF00486 Transcriptional regulatory protein, C terminal MF133_11755 PF00072 Response regulator receiver domain MF133_11765 PF00672 HAMP domain MF133_11765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_11765 PF00512 His Kinase A (phospho-acceptor) domain MF133_11775 PF00390 Malic enzyme, N-terminal domain MF133_11775 PF03949 Malic enzyme, NAD binding domain MF133_11780 PF11066 Protein of unknown function (DUF2867) MF133_11780 PF13460 NAD(P)H-binding MF133_11785 PF01197 Ribosomal protein L31 MF133_11790 PF18074 Primosomal protein N C-terminal domain MF133_11790 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MF133_11790 PF17764 3′ DNA-binding domain (3′BD) MF133_11790 PF00270 DEAD/DEAH box helicase MF133_11790 PF00271 Helicase conserved C-terminal domain MF133_11795 PF00440 Bacterial regulatory proteins, tetR family MF133_11805 PF00691 OmpA family MF133_11805 PF01389 OmpA-like transmembrane domain MF133_11810 PF00291 Pyridoxal-phosphate dependent enzyme MF133_11810 PF00585 C-terminal regulatory domain of Threonine dehydratase MF133_11815 PF00920 Dehydratase family MF133_11820 PF01063 Amino-transferase class IV MF133_11830 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MF133_11830 PF00205 Thiamine pyrophosphate enzyme, central domain MF133_11830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MF133_11835 PF01078 Magnesium chelatase, subunit ChlI MF133_11835 PF13335 Magnesium chelatase, subunit ChlI C-terminal MF133_11840 PF01553 Acyltransferase MF133_11845 PF01553 Acyltransferase MF133_11850 PF04463 Protein of unknown function (DUF523) MF133_11860 PF00857 Isochorismatase family MF133_11865 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family MF133_11865 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain MF133_11870 PF01323 DSBA-like thioredoxin domain MF133_11875 PF01636 Phosphotransferase enzyme family MF133_11880 PF12801 4Fe-4S binding domain MF133_11880 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase MF133_11880 PF13746 4Fe-4S dicluster domain MF133_11885 PF06288 Protein of unknown function (DUF1040) MF133_11890 PF00360 Phytochrome region MF133_11890 PF00990 Diguanylate cyclase, GGDEF domain MF133_11890 PF01590 GAF domain MF133_11890 PF00563 EAL domain MF133_11895 PF09278 MerR, DNA binding MF133_11895 PF00376 MerR family regulatory protein MF133_11900 PF00403 Heavy-metal-associated domain MF133_11905 PF00156 Phosphoribosyl transferase domain MF133_11910 PF03725 3' exoribonuclease family, domain 2 MF133_11910 PF01138 3' exoribonuclease family, domain 1 MF133_11915 PF08340 Domain of unknown function (DUF1732) MF133_11915 PF03755 YicC-like family, N-terminal region MF133_11925 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MF133_11930 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MF133_11935 PF00535 Glycosyl transferase family 2 MF133_11940 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MF133_11945 PF01467 Cytidylyltransferase-like MF133_11950 PF04393 Protein of unknown function (DUF535) MF133_11955 PF06827 Zinc finger found in FPG and IleRS MF133_11955 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MF133_11955 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MF133_11965 PF00471 Ribosomal protein L33 MF133_11970 PF00830 Ribosomal L28 family MF133_11975 PF04002 RadC-like JAB domain MF133_11980 PF04127 DNA / pantothenate metabolism flavoprotein MF133_11980 PF02441 Flavoprotein MF133_11985 PF00692 dUTPase MF133_11990 PF00440 Bacterial regulatory proteins, tetR family MF133_12010 PF05552 Conserved TM helix MF133_12010 PF00924 Mechanosensitive ion channel MF133_12020 PF00342 Phosphoglucose isomerase MF133_12025 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MF133_12025 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MF133_12030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_12030 PF03466 LysR substrate binding domain MF133_12040 PF00583 Acetyltransferase (GNAT) family MF133_12040 PF13380 CoA binding domain MF133_12040 PF13607 Succinyl-CoA ligase like flavodoxin domain MF133_12075 PF01177 Asp/Glu/Hydantoin racemase MF133_12080 PF07715 TonB-dependent Receptor Plug Domain MF133_12080 PF00593 TonB dependent receptor MF133_12085 PF00731 AIR carboxylase MF133_12090 PF02222 ATP-grasp domain MF133_12090 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MF133_12095 PF07690 Major Facilitator Superfamily MF133_12100 PF00072 Response regulator receiver domain MF133_12100 PF04397 LytTr DNA-binding domain MF133_12105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_12105 PF06580 Histidine kinase MF133_12105 PF07694 5TMR of 5TMR-LYT MF133_12115 PF00989 PAS fold MF133_12115 PF00072 Response regulator receiver domain MF133_12115 PF00497 Bacterial extracellular solute-binding proteins, family 3 MF133_12115 PF01627 Hpt domain MF133_12115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_12115 PF00512 His Kinase A (phospho-acceptor) domain MF133_12120 PF00072 Response regulator receiver domain MF133_12120 PF00196 Bacterial regulatory proteins, luxR family MF133_12125 PF16449 Fimbrillin MatB MF133_12130 PF18649 EcpB C-terminal domain MF133_12135 PF16967 E-set like domain MF133_12135 PF15976 CS1-pili formation C-terminal MF133_12150 PF01810 LysE type translocator MF133_12155 PF07690 Major Facilitator Superfamily MF133_12165 PF00210 Ferritin-like domain MF133_12170 PF00990 Diguanylate cyclase, GGDEF domain MF133_12170 PF05230 MASE2 domain MF133_12175 PF07055 Enoyl reductase FAD binding domain MF133_12175 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MF133_12175 PF12241 Trans-2-enoyl-CoA reductase catalytic region MF133_12180 PF00582 Universal stress protein family MF133_12185 PF00579 tRNA synthetases class I (W and Y) MF133_12190 PF03466 LysR substrate binding domain MF133_12190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_12210 PF00892 EamA-like transporter family MF133_12225 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MF133_12230 PF00625 Guanylate kinase MF133_12235 PF01192 RNA polymerase Rpb6 MF133_12240 PF13291 ACT domain MF133_12240 PF04607 Region found in RelA / SpoT proteins MF133_12240 PF02824 TGS domain MF133_12245 PF12105 SpoU, rRNA methylase, C-terminal MF133_12245 PF00588 SpoU rRNA Methylase family MF133_12250 PF00132 Bacterial transferase hexapeptide (six repeats) MF133_12255 PF12146 Serine aminopeptidase, S33 MF133_12290 PF00440 Bacterial regulatory proteins, tetR family MF133_12295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MF133_12300 PF00873 AcrB/AcrD/AcrF family MF133_12305 PF00497 Bacterial extracellular solute-binding proteins, family 3 MF133_12305 PF00512 His Kinase A (phospho-acceptor) domain MF133_12305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_12310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MF133_12310 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF133_12315 PF03814 Potassium-transporting ATPase A subunit MF133_12325 PF02669 K+-transporting ATPase, c chain MF133_12330 PF13493 Domain of unknown function (DUF4118) MF133_12330 PF13492 GAF domain MF133_12330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_12330 PF00512 His Kinase A (phospho-acceptor) domain MF133_12330 PF02702 Osmosensitive K+ channel His kinase sensor domain MF133_12335 PF00486 Transcriptional regulatory protein, C terminal MF133_12335 PF00072 Response regulator receiver domain MF133_12340 PF07690 Major Facilitator Superfamily MF133_12355 PF00155 Aminotransferase class I and II MF133_12360 PF00011 Hsp20/alpha crystallin family MF133_12365 PF00011 Hsp20/alpha crystallin family MF133_12370 PF12706 Beta-lactamase superfamily domain MF133_12375 PF02311 AraC-like ligand binding domain MF133_12375 PF12833 Helix-turn-helix domain MF133_12380 PF01751 Toprim domain MF133_12380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_12380 PF00204 DNA gyrase B MF133_12380 PF00986 DNA gyrase B subunit, carboxyl terminus MF133_12380 PF18053 DNA gyrase B subunit insert domain MF133_12385 PF02463 RecF/RecN/SMC N terminal domain MF133_12390 PF00712 DNA polymerase III beta subunit, N-terminal domain MF133_12390 PF02767 DNA polymerase III beta subunit, central domain MF133_12390 PF02768 DNA polymerase III beta subunit, C-terminal domain MF133_12395 PF00308 Bacterial dnaA protein MF133_12395 PF08299 Bacterial dnaA protein helix-turn-helix MF133_12395 PF11638 DnaA N-terminal domain MF133_12400 PF00497 Bacterial extracellular solute-binding proteins, family 3 MF133_12405 PF00528 Binding-protein-dependent transport system inner membrane component MF133_12410 PF00005 ABC transporter MF133_12415 PF00468 Ribosomal protein L34 MF133_12420 PF00825 Ribonuclease P MF133_12425 PF01809 Putative membrane protein insertion efficiency factor MF133_12430 PF02096 60Kd inner membrane protein MF133_12430 PF14849 YidC periplasmic domain MF133_12435 PF12631 MnmE helical domain MF133_12435 PF10396 GTP-binding protein TrmE N-terminus MF133_12435 PF01926 50S ribosome-binding GTPase MF133_12440 PF02899 Phage integrase, N-terminal SAM-like domain MF133_12440 PF00589 Phage integrase family MF133_12480 PF01420 Type I restriction modification DNA specificity domain MF133_12485 PF12161 HsdM N-terminal domain MF133_12485 PF02384 N-6 DNA Methylase MF133_12490 PF08463 EcoEI R protein C-terminal MF133_12490 PF00271 Helicase conserved C-terminal domain MF133_12490 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) MF133_12490 PF04851 Type III restriction enzyme, res subunit MF133_12495 PF04851 Type III restriction enzyme, res subunit MF133_12495 PF00271 Helicase conserved C-terminal domain MF133_12495 PF08463 EcoEI R protein C-terminal MF133_12495 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) MF133_12520 PF13610 DDE domain MF133_12525 PF01636 Phosphotransferase enzyme family MF133_12530 PF00005 ABC transporter MF133_12530 PF12848 ABC transporter MF133_12535 PF13610 DDE domain MF133_12540 PF01636 Phosphotransferase enzyme family MF133_12565 PF00809 Pterin binding enzyme MF133_12570 PF00893 Small Multidrug Resistance protein MF133_12575 PF00186 Dihydrofolate reductase MF133_12590 PF13599 Pentapeptide repeats (9 copies) MF133_12595 PF00589 Phage integrase family MF133_12595 PF13495 Phage integrase, N-terminal SAM-like domain MF133_12605 PF13657 HipA N-terminal domain MF133_12605 PF07804 HipA-like C-terminal domain MF133_12610 PF01032 FecCD transport family MF133_12615 PF01497 Periplasmic binding protein MF133_12620 PF00005 ABC transporter MF133_12625 PF00005 ABC transporter MF133_12630 PF07715 TonB-dependent Receptor Plug Domain MF133_12630 PF00593 TonB dependent receptor MF133_12635 PF00258 Flavodoxin MF133_12640 PF01134 Glucose inhibited division protein A MF133_12640 PF13932 GidA associated domain MF133_12645 PF02527 rRNA small subunit methyltransferase G MF133_12650 PF13614 AAA domain MF133_12655 PF17762 HTH domain found in ParB protein MF133_12655 PF02195 ParB-like nuclease domain MF133_12665 PF00119 ATP synthase A chain MF133_12670 PF00137 ATP synthase subunit C MF133_12675 PF00430 ATP synthase B/B' CF(0) MF133_12680 PF00213 ATP synthase delta (OSCP) subunit MF133_12685 PF00306 ATP synthase alpha/beta chain, C terminal domain MF133_12685 PF02874 ATP synthase alpha/beta family, beta-barrel domain MF133_12685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MF133_12690 PF00231 ATP synthase MF133_12695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MF133_12695 PF02874 ATP synthase alpha/beta family, beta-barrel domain MF133_12700 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain MF133_12700 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MF133_12705 PF14602 Hexapeptide repeat of succinyl-transferase MF133_12705 PF12804 MobA-like NTP transferase domain MF133_12705 PF00132 Bacterial transferase hexapeptide (six repeats) MF133_12710 PF06123 Inner membrane protein CreD MF133_12725 PF00072 Response regulator receiver domain MF133_12725 PF00486 Transcriptional regulatory protein, C terminal MF133_12730 PF00455 DeoR C terminal sensor domain MF133_12730 PF08220 DeoR-like helix-turn-helix domain MF133_12735 PF01380 SIS domain MF133_12740 PF03472 Autoinducer binding domain MF133_12740 PF00196 Bacterial regulatory proteins, luxR family MF133_12750 PF01618 MotA/TolQ/ExbB proton channel family MF133_12755 PF01618 MotA/TolQ/ExbB proton channel family MF133_12760 PF02472 Biopolymer transport protein ExbD/TolR MF133_12765 PF03544 Gram-negative bacterial TonB protein C-terminal MF133_12800 PF07969 Amidohydrolase family MF133_12805 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MF133_12810 PF01209 ubiE/COQ5 methyltransferase family MF133_12815 PF02036 SCP-2 sterol transfer family MF133_12820 PF03109 ABC1 family MF133_12825 PF02416 mttA/Hcf106 family MF133_12830 PF02416 mttA/Hcf106 family MF133_12835 PF00902 Sec-independent protein translocase protein (TatC) MF133_12840 PF01026 TatD related DNase MF133_12845 PF00490 Delta-aminolevulinic acid dehydratase MF133_12850 PF01432 Peptidase family M3 MF133_12855 PF00563 EAL domain MF133_12855 PF00990 Diguanylate cyclase, GGDEF domain MF133_12855 PF03707 Bacterial signalling protein N terminal repeat MF133_12860 PF04445 Putative SAM-dependent methyltransferase MF133_12870 PF02541 Ppx/GppA phosphatase family MF133_12875 PF00270 DEAD/DEAH box helicase MF133_12875 PF00271 Helicase conserved C-terminal domain MF133_12880 PF00085 Thioredoxin MF133_12885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MF133_12885 PF07498 Rho termination factor, N-terminal domain MF133_12885 PF07497 Rho termination factor, RNA-binding domain MF133_12895 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MF133_12900 PF00175 Oxidoreductase NAD-binding domain MF133_12905 PF04380 Membrane fusogenic activity MF133_12910 PF12262 Bacterial virulence factor lipase N-terminal MF133_12915 PF01694 Rhomboid family MF133_12915 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease MF133_12920 PF00581 Rhodanese-like domain MF133_12925 PF01810 LysE type translocator MF133_12935 PF00005 ABC transporter MF133_12940 PF00005 ABC transporter MF133_12940 PF12399 Branched-chain amino acid ATP-binding cassette transporter MF133_12945 PF11862 Domain of unknown function (DUF3382) MF133_12945 PF02653 Branched-chain amino acid transport system / permease component MF133_12950 PF02653 Branched-chain amino acid transport system / permease component MF133_12955 PF13458 Periplasmic binding protein MF133_12960 PF00356 Bacterial regulatory proteins, lacI family MF133_12965 PF01590 GAF domain MF133_12965 PF00158 Sigma-54 interaction domain MF133_12975 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF133_12975 PF18113 Rubredoxin binding C-terminal domain MF133_12985 PF12801 4Fe-4S binding domain MF133_12995 PF01212 Beta-eliminating lyase MF133_13000 PF03222 Tryptophan/tyrosine permease family MF133_13005 PF03222 Tryptophan/tyrosine permease family MF133_13020 PF01590 GAF domain MF133_13020 PF00990 Diguanylate cyclase, GGDEF domain MF133_13020 PF00563 EAL domain MF133_13020 PF00360 Phytochrome region MF133_13030 PF05746 DALR anticodon binding domain MF133_13030 PF02092 Glycyl-tRNA synthetase beta subunit MF133_13035 PF02091 Glycyl-tRNA synthetase alpha subunit MF133_13040 PF03352 Methyladenine glycosylase MF133_13045 PF00857 Isochorismatase family MF133_13065 PF01042 Endoribonuclease L-PSP MF133_13070 PF01206 Sulfurtransferase TusA MF133_13085 PF01547 Bacterial extracellular solute-binding protein MF133_13090 PF00672 HAMP domain MF133_13090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_13090 PF00512 His Kinase A (phospho-acceptor) domain MF133_13095 PF00072 Response regulator receiver domain MF133_13095 PF00486 Transcriptional regulatory protein, C terminal MF133_13100 PF00108 Thiolase, N-terminal domain MF133_13100 PF02803 Thiolase, C-terminal domain MF133_13105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MF133_13105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MF133_13105 PF00378 Enoyl-CoA hydratase/isomerase MF133_13110 PF00501 AMP-binding enzyme MF133_13110 PF13193 AMP-binding enzyme C-terminal domain MF133_13115 PF00557 Metallopeptidase family M24 MF133_13120 PF09186 Domain of unknown function (DUF1949) MF133_13120 PF01205 Uncharacterized protein family UPF0029 MF133_13125 PF02386 Cation transport protein MF133_13130 PF12724 Flavodoxin domain MF133_13165 PF00899 ThiF family MF133_13170 PF02657 Fe-S metabolism associated domain MF133_13175 PF00266 Aminotransferase class-V MF133_13180 PF00580 UvrD/REP helicase N-terminal domain MF133_13180 PF13361 UvrD-like helicase C-terminal domain MF133_13185 PF00563 EAL domain MF133_13185 PF03707 Bacterial signalling protein N terminal repeat MF133_13185 PF00990 Diguanylate cyclase, GGDEF domain MF133_13190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MF133_13195 PF08240 Alcohol dehydrogenase GroES-like domain MF133_13195 PF00107 Zinc-binding dehydrogenase MF133_13200 PF00155 Aminotransferase class I and II MF133_13205 PF08360 QacR-like protein, C-terminal region MF133_13205 PF00440 Bacterial regulatory proteins, tetR family MF133_13210 PF01370 NAD dependent epimerase/dehydratase family MF133_13225 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) MF133_13245 PF03611 PTS system sugar-specific permease component MF133_13255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MF133_13260 PF00356 Bacterial regulatory proteins, lacI family MF133_13260 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MF133_13275 PF03748 Flagellar basal body-associated protein FliL MF133_13280 PF04345 Chorismate lyase MF133_13285 PF01040 UbiA prenyltransferase family MF133_13290 PF01553 Acyltransferase MF133_13295 PF01726 LexA DNA binding domain MF133_13295 PF00717 Peptidase S24-like MF133_13305 PF02630 SCO1/SenC MF133_13310 PF01554 MatE MF133_13315 PF00588 SpoU rRNA Methylase family MF133_13320 PF00512 His Kinase A (phospho-acceptor) domain MF133_13320 PF00672 HAMP domain MF133_13320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_13320 PF16527 Two-component sensor protein CpxA, periplasmic domain MF133_13325 PF00072 Response regulator receiver domain MF133_13325 PF00486 Transcriptional regulatory protein, C terminal MF133_13330 PF01545 Cation efflux family MF133_13330 PF16916 Dimerisation domain of Zinc Transporter MF133_13335 PF00132 Bacterial transferase hexapeptide (six repeats) MF133_13335 PF06426 Serine acetyltransferase, N-terminal MF133_13345 PF06005 Cell division protein ZapB MF133_13360 PF00132 Bacterial transferase hexapeptide (six repeats) MF133_13400 PF00356 Bacterial regulatory proteins, lacI family MF133_13405 PF02837 Glycosyl hydrolases family 2, sugar binding domain MF133_13405 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MF133_13405 PF00703 Glycosyl hydrolases family 2 MF133_13405 PF16353 Domain of unknown function(DUF4981) MF133_13405 PF02929 Beta galactosidase small chain MF133_13410 PF04074 YhcH/YjgK/YiaL MF133_13415 PF13520 Amino acid permease MF133_13420 PF01588 Putative tRNA binding domain MF133_13425 PF13520 Amino acid permease MF133_13430 PF13593 SBF-like CPA transporter family (DUF4137) MF133_13435 PF12867 DinB superfamily MF133_13435 PF03781 Sulfatase-modifying factor enzyme 1 MF133_13450 PF00756 Putative esterase MF133_13455 PF00107 Zinc-binding dehydrogenase MF133_13455 PF08240 Alcohol dehydrogenase GroES-like domain MF133_13460 PF03466 LysR substrate binding domain MF133_13460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_13465 PF02653 Branched-chain amino acid transport system / permease component MF133_13470 PF02653 Branched-chain amino acid transport system / permease component MF133_13475 PF00005 ABC transporter MF133_13480 PF02608 ABC transporter substrate-binding protein PnrA-like MF133_13495 PF00580 UvrD/REP helicase N-terminal domain MF133_13495 PF13361 UvrD-like helicase C-terminal domain MF133_13520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_13520 PF03466 LysR substrate binding domain MF133_13535 PF14001 YdfZ protein MF133_13555 PF03466 LysR substrate binding domain MF133_13555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_13560 PF01810 LysE type translocator MF133_13565 PF06206 CpeT/CpcT family (DUF1001) MF133_13570 PF01810 LysE type translocator MF133_13575 PF12833 Helix-turn-helix domain MF133_13580 PF00892 EamA-like transporter family MF133_13590 PF00171 Aldehyde dehydrogenase family MF133_13595 PF01381 Helix-turn-helix MF133_13595 PF07883 Cupin domain MF133_13600 PF00202 Aminotransferase class-III MF133_13605 PF00171 Aldehyde dehydrogenase family MF133_13610 PF02540 NAD synthase MF133_13610 PF00958 GMP synthase C terminal domain MF133_13610 PF00117 Glutamine amidotransferase class-I MF133_13615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_13615 PF03466 LysR substrate binding domain MF133_13620 PF00294 pfkB family carbohydrate kinase MF133_13625 PF02082 Transcriptional regulator MF133_13640 PF02646 RmuC family MF133_13645 PF02386 Cation transport protein MF133_13650 PF02080 TrkA-C domain MF133_13650 PF02254 TrkA-N domain MF133_13655 PF01189 16S rRNA methyltransferase RsmB/F MF133_13655 PF01029 NusB family MF133_13660 PF02911 Formyl transferase, C-terminal domain MF133_13660 PF00551 Formyl transferase MF133_13665 PF01327 Polypeptide deformylase MF133_13675 PF02481 DNA recombination-mediator protein A MF133_13675 PF17782 DprA winged helix domain MF133_13680 PF04361 Protein of unknown function (DUF494) MF133_13685 PF01396 Topoisomerase DNA binding C4 zinc finger MF133_13690 PF01300 Telomere recombination MF133_13695 PF01218 Coproporphyrinogen III oxidase MF133_13700 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MF133_13700 PF01488 Shikimate / quinate 5-dehydrogenase MF133_13700 PF08501 Shikimate dehydrogenase substrate binding domain MF133_13705 PF01926 50S ribosome-binding GTPase MF133_13710 PF00034 Cytochrome c MF133_13715 PF04220 Der GTPase activator (YihI) MF133_13720 PF10675 Protein of unknown function (DUF2489) MF133_13725 PF06969 HemN C-terminal domain MF133_13725 PF04055 Radical SAM superfamily MF133_13730 PF00962 Adenosine/AMP deaminase MF133_13735 PF02954 Bacterial regulatory protein, Fis family MF133_13735 PF00072 Response regulator receiver domain MF133_13735 PF00158 Sigma-54 interaction domain MF133_13740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_13740 PF00512 His Kinase A (phospho-acceptor) domain MF133_13740 PF00989 PAS fold MF133_13750 PF03951 Glutamine synthetase, beta-Grasp domain MF133_13750 PF00120 Glutamine synthetase, catalytic domain MF133_13755 PF00679 Elongation factor G C-terminus MF133_13755 PF00009 Elongation factor Tu GTP binding domain MF133_13755 PF03144 Elongation factor Tu domain 2 MF133_13760 PF03631 Virulence factor BrkB MF133_13765 PF02580 D-Tyr-tRNA(Tyr) deacylase MF133_13775 PF00583 Acetyltransferase (GNAT) family MF133_13775 PF09500 Putative thioesterase (yiiD_Cterm) MF133_13785 PF00271 Helicase conserved C-terminal domain MF133_13785 PF17191 RecG wedge domain MF133_13785 PF00270 DEAD/DEAH box helicase MF133_13790 PF13091 PLD-like domain MF133_13795 PF02447 GntP family permease MF133_13800 PF01202 Shikimate kinase MF133_13805 PF00920 Dehydratase family MF133_13810 PF01081 KDPG and KHG aldolase MF133_13835 PF01551 Peptidase family M23 MF133_13840 PF01676 Metalloenzyme superfamily MF133_13840 PF06415 BPG-independent PGAM N-terminus (iPGM_N) MF133_13845 PF00581 Rhodanese-like domain MF133_13850 PF02556 Preprotein translocase subunit SecB MF133_13855 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MF133_13855 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MF133_13860 PF01521 Iron-sulphur cluster biosynthesis MF133_13860 PF01106 NifU-like domain MF133_13865 PF00156 Phosphoribosyl transferase domain MF133_13870 PF00561 alpha/beta hydrolase fold MF133_13885 PF16921 Tex protein YqgF-like domain MF133_13885 PF09371 Tex-like protein N-terminal domain MF133_13885 PF17674 HHH domain MF133_13885 PF00575 S1 RNA binding domain MF133_13890 PF01272 Transcription elongation factor, GreA/GreB, C-term MF133_13890 PF03449 Transcription elongation factor, N-terminal MF133_13895 PF00486 Transcriptional regulatory protein, C terminal MF133_13895 PF00072 Response regulator receiver domain MF133_13900 PF00512 His Kinase A (phospho-acceptor) domain MF133_13900 PF00672 HAMP domain MF133_13900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_13910 PF00338 Ribosomal protein S10p/S20e MF133_13915 PF00297 Ribosomal protein L3 MF133_13920 PF00573 Ribosomal protein L4/L1 family MF133_13925 PF00276 Ribosomal protein L23 MF133_13930 PF00181 Ribosomal Proteins L2, RNA binding domain MF133_13930 PF03947 Ribosomal Proteins L2, C-terminal domain MF133_13935 PF00203 Ribosomal protein S19 MF133_13940 PF00237 Ribosomal protein L22p/L17e MF133_13945 PF07650 KH domain MF133_13945 PF00189 Ribosomal protein S3, C-terminal domain MF133_13950 PF00252 Ribosomal protein L16p/L10e MF133_13955 PF00831 Ribosomal L29 protein MF133_13960 PF00366 Ribosomal protein S17 MF133_13965 PF00238 Ribosomal protein L14p/L23e MF133_13970 PF00467 KOW motif MF133_13970 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MF133_13975 PF00281 Ribosomal protein L5 MF133_13975 PF00673 ribosomal L5P family C-terminus MF133_13980 PF00253 Ribosomal protein S14p/S29e MF133_13985 PF00410 Ribosomal protein S8 MF133_13990 PF00347 Ribosomal protein L6 MF133_13995 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MF133_14000 PF00333 Ribosomal protein S5, N-terminal domain MF133_14000 PF03719 Ribosomal protein S5, C-terminal domain MF133_14005 PF00327 Ribosomal protein L30p/L7e MF133_14010 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MF133_14015 PF00344 SecY translocase MF133_14020 PF00444 Ribosomal protein L36 MF133_14025 PF00416 Ribosomal protein S13/S18 MF133_14030 PF00411 Ribosomal protein S11 MF133_14035 PF01479 S4 domain MF133_14035 PF00163 Ribosomal protein S4/S9 N-terminal domain MF133_14040 PF01000 RNA polymerase Rpb3/RpoA insert domain MF133_14040 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MF133_14040 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MF133_14045 PF01196 Ribosomal protein L17 MF133_14085 PF00999 Sodium/hydrogen exchanger family MF133_14085 PF02254 TrkA-N domain MF133_14090 PF02525 Flavodoxin-like fold MF133_14095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_14095 PF03466 LysR substrate binding domain MF133_14100 PF00106 short chain dehydrogenase MF133_14115 PF00326 Prolyl oligopeptidase family MF133_14115 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MF133_14120 PF16868 NMT1-like family MF133_14135 PF07947 YhhN family MF133_14140 PF07690 Major Facilitator Superfamily MF133_14145 PF13533 Biotin-lipoyl like MF133_14150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_14150 PF03466 LysR substrate binding domain MF133_14160 PF00375 Sodium:dicarboxylate symporter family MF133_14165 PF10678 Protein of unknown function (DUF2492) MF133_14170 PF01914 MarC family integral membrane protein MF133_14175 PF03466 LysR substrate binding domain MF133_14175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_14180 PF02416 mttA/Hcf106 family MF133_14190 PF00497 Bacterial extracellular solute-binding proteins, family 3 MF133_14190 PF01464 Transglycosylase SLT domain MF133_14200 PF13091 PLD-like domain MF133_14210 PF00440 Bacterial regulatory proteins, tetR family MF133_14215 PF07226 Protein of unknown function (DUF1422) MF133_14230 PF02881 SRP54-type protein, helical bundle domain MF133_14230 PF00448 SRP54-type protein, GTPase domain MF133_14235 PF00005 ABC transporter MF133_14240 PF18075 FtsX extracellular domain MF133_14245 PF00140 Sigma-70 factor, region 1.2 MF133_14245 PF04542 Sigma-70 region 2 MF133_14245 PF04545 Sigma-70, region 4 MF133_14250 PF00484 Carbonic anhydrase MF133_14255 PF07702 UTRA domain MF133_14255 PF00392 Bacterial regulatory proteins, gntR family MF133_14260 PF01979 Amidohydrolase family MF133_14265 PF00491 Arginase family MF133_14270 PF17391 Urocanase N-terminal domain MF133_14270 PF01175 Urocanase Rossmann-like domain MF133_14270 PF17392 Urocanase C-terminal domain MF133_14275 PF00221 Aromatic amino acid lyase MF133_14280 PF01699 Sodium/calcium exchanger protein MF133_14285 PF12792 CSS motif domain associated with EAL MF133_14285 PF00563 EAL domain MF133_14320 PF00263 Bacterial type II and III secretion system protein MF133_14320 PF03958 Bacterial type II/III secretion system short domain MF133_14335 PF00437 Type II/IV secretion system protein MF133_14335 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MF133_14340 PF00482 Type II secretion system (T2SS), protein F MF133_14355 PF07963 Prokaryotic N-terminal methylation motif MF133_14355 PF08334 Type II secretion system (T2SS), protein G MF133_14360 PF07963 Prokaryotic N-terminal methylation motif MF133_14360 PF00114 Pilin (bacterial filament) MF133_14390 PF04085 rod shape-determining protein MreC MF133_14395 PF04093 rod shape-determining protein MreD MF133_14400 PF02545 Maf-like protein MF133_14405 PF10150 Ribonuclease E/G family MF133_14405 PF00575 S1 RNA binding domain MF133_14410 PF13502 AsmA-like C-terminal region MF133_14410 PF13116 Protein of unknown function MF133_14415 PF00795 Carbon-nitrogen hydrolase MF133_14420 PF01523 Putative modulator of DNA gyrase MF133_14430 PF01914 MarC family integral membrane protein MF133_14435 PF07690 Major Facilitator Superfamily MF133_14445 PF00072 Response regulator receiver domain MF133_14450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MF133_14450 PF00072 Response regulator receiver domain MF133_14450 PF01627 Hpt domain MF133_14450 PF00512 His Kinase A (phospho-acceptor) domain MF133_14450 PF00672 HAMP domain MF133_14450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_14455 PF13581 Histidine kinase-like ATPase domain MF133_14460 PF01740 STAS domain MF133_14460 PF08678 Rsbr N terminal MF133_14465 PF08447 PAS fold MF133_14465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_14465 PF13426 PAS domain MF133_14470 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) MF133_14475 PF04228 Putative neutral zinc metallopeptidase MF133_14495 PF00999 Sodium/hydrogen exchanger family MF133_14500 PF00809 Pterin binding enzyme MF133_14500 PF02965 Vitamin B12 dependent methionine synthase, activation domain MF133_14500 PF02574 Homocysteine S-methyltransferase MF133_14500 PF02310 B12 binding domain MF133_14500 PF02607 B12 binding domain MF133_14510 PF08443 RimK-like ATP-grasp domain MF133_14510 PF18030 RimK PreATP-grasp domain MF133_14515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_14520 PF00072 Response regulator receiver domain MF133_14520 PF00486 Transcriptional regulatory protein, C terminal MF133_14535 PF13667 ThiC-associated domain MF133_14535 PF01964 Radical SAM ThiC family MF133_14540 PF02581 Thiamine monophosphate synthase MF133_14545 PF00899 ThiF family MF133_14575 PF00132 Bacterial transferase hexapeptide (six repeats) MF133_14580 PF13036 Peptidoglycan-synthase activator LpoB MF133_14585 PF00990 Diguanylate cyclase, GGDEF domain MF133_14590 PF06055 Exopolysaccharide synthesis, ExoD MF133_14600 PF08803 Putative mono-oxygenase ydhR MF133_14605 PF01638 HxlR-like helix-turn-helix MF133_14620 PF00593 TonB dependent receptor MF133_14620 PF07715 TonB-dependent Receptor Plug Domain MF133_14630 PF08241 Methyltransferase domain MF133_14640 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded MF133_14645 PF03692 Putative zinc- or iron-chelating domain MF133_14650 PF07219 HemY protein N-terminus MF133_14650 PF07719 Tetratricopeptide repeat MF133_14655 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase MF133_14660 PF02602 Uroporphyrinogen-III synthase HemD MF133_14665 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MF133_14665 PF03900 Porphobilinogen deaminase, C-terminal domain MF133_14670 PF12633 Adenylate cyclase NT domain MF133_14670 PF01295 Adenylate cyclase, class-I MF133_14675 PF02230 Phospholipase/Carboxylesterase MF133_14680 PF01491 Frataxin-like domain MF133_14690 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MF133_14690 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MF133_14695 PF01678 Diaminopimelate epimerase MF133_14705 PF00589 Phage integrase family MF133_14705 PF02899 Phage integrase, N-terminal SAM-like domain MF133_14710 PF13419 Haloacid dehalogenase-like hydrolase MF133_14720 PF07722 Peptidase C26 MF133_14740 PF04307 LexA-binding, inner membrane-associated putative hydrolase MF133_14745 PF02464 Competence-damaged protein MF133_14745 PF00994 Probable molybdopterin binding domain MF133_14755 PF04204 Homoserine O-succinyltransferase MF133_14765 PF01037 Lrp/AsnC ligand binding domain MF133_14770 PF00884 Sulfatase MF133_14785 PF02308 MgtC family MF133_14805 PF00106 short chain dehydrogenase MF133_14820 PF00465 Iron-containing alcohol dehydrogenase MF133_14830 PF01053 Cys/Met metabolism PLP-dependent enzyme MF133_14840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MF133_14840 PF12793 Sugar transport-related sRNA regulator N-term MF133_14860 PF00561 alpha/beta hydrolase fold MF133_14870 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MF133_14870 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MF133_14875 PF02698 DUF218 domain MF133_14880 PF01752 Collagenase MF133_14880 PF08453 Peptidase family M9 N-terminal MF133_14885 PF00501 AMP-binding enzyme MF133_14885 PF13193 AMP-binding enzyme C-terminal domain MF133_14890 PF13378 Enolase C-terminal domain-like MF133_14895 PF00378 Enoyl-CoA hydratase/isomerase MF133_14900 PF12697 Alpha/beta hydrolase family MF133_14905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MF133_14905 PF16582 Middle domain of thiamine pyrophosphate MF133_14905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MF133_14910 PF00425 chorismate binding enzyme MF133_14915 PF01040 UbiA prenyltransferase family MF133_14935 PF03880 DbpA RNA binding domain MF133_14935 PF00270 DEAD/DEAH box helicase MF133_14935 PF00271 Helicase conserved C-terminal domain MF133_14940 PF07662 Na+ dependent nucleoside transporter C-terminus MF133_14940 PF01773 Na+ dependent nucleoside transporter N-terminus MF133_14940 PF07670 Nucleoside recognition MF133_14955 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 MF133_14960 PF01544 CorA-like Mg2+ transporter protein MF133_14975 PF00999 Sodium/hydrogen exchanger family MF133_14975 PF02080 TrkA-C domain MF133_14975 PF03471 Transporter associated domain MF133_14980 PF05068 Mannitol repressor MF133_14985 PF01232 Mannitol dehydrogenase Rossmann domain MF133_14985 PF08125 Mannitol dehydrogenase C-terminal domain MF133_14990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MF133_14990 PF02378 Phosphotransferase system, EIIC MF133_14990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MF133_14995 PF17876 Cold shock domain MF133_14995 PF08206 Ribonuclease B OB domain MF133_14995 PF00773 RNB domain MF133_15000 PF03466 LysR substrate binding domain MF133_15000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_15005 PF00765 Autoinducer synthase MF133_15010 PF00196 Bacterial regulatory proteins, luxR family MF133_15010 PF03472 Autoinducer binding domain MF133_15015 PF01810 LysE type translocator MF133_15020 PF02872 5'-nucleotidase, C-terminal domain MF133_15020 PF00149 Calcineurin-like phosphoesterase MF133_15025 PF03279 Bacterial lipid A biosynthesis acyltransferase MF133_15030 PF01467 Cytidylyltransferase-like MF133_15030 PF00294 pfkB family carbohydrate kinase MF133_15035 PF02321 Outer membrane efflux protein MF133_15040 PF00293 NUDIX domain MF133_15045 PF06853 Protein of unknown function (DUF1249) MF133_15050 PF00149 Calcineurin-like phosphoesterase MF133_15060 PF05728 Uncharacterised protein family (UPF0227) MF133_15065 PF00293 NUDIX domain MF133_15075 PF07869 Protein of unknown function (DUF1656) MF133_15080 PF00529 HlyD membrane-fusion protein of T1SS MF133_15080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MF133_15085 PF04632 Fusaric acid resistance protein family MF133_15095 PF03989 DNA gyrase C-terminal domain, beta-propeller MF133_15095 PF00521 DNA gyrase/topoisomerase IV, subunit A MF133_15145 PF00226 DnaJ domain MF133_15145 PF01556 DnaJ C terminal domain MF133_15145 PF00684 DnaJ central domain MF133_15155 PF00578 AhpC/TSA family MF133_15180 PF01553 Acyltransferase MF133_15185 PF04012 PspA/IM30 family MF133_15200 PF01541 GIY-YIG catalytic domain MF133_15205 PF00892 EamA-like transporter family MF133_15210 PF03167 Uracil DNA glycosylase superfamily MF133_15220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_15220 PF03466 LysR substrate binding domain MF133_15225 PF00950 ABC 3 transport family MF133_15230 PF00005 ABC transporter MF133_15235 PF01297 Zinc-uptake complex component A periplasmic MF133_15255 PF01551 Peptidase family M23 MF133_15255 PF08525 Opacity-associated protein A N-terminal motif MF133_15255 PF01476 LysM domain MF133_15260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MF133_15265 PF04222 Protein of unknown function (DUF416) MF133_15280 PF02028 BCCT, betaine/carnitine/choline family transporter MF133_15285 PF01624 MutS domain I MF133_15285 PF05188 MutS domain II MF133_15285 PF05192 MutS domain III MF133_15285 PF05190 MutS family domain IV MF133_15285 PF00488 MutS domain V MF133_15295 PF02464 Competence-damaged protein MF133_15300 PF00154 recA bacterial DNA recombination protein MF133_15305 PF02631 RecX family MF133_15310 PF01411 tRNA synthetases class II (A) MF133_15310 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MF133_15310 PF02272 DHHA1 domain MF133_15315 PF00696 Amino acid kinase family MF133_15315 PF01842 ACT domain MF133_15315 PF13840 ACT domain MF133_15320 PF02599 Global regulator protein family MF133_15355 PF00768 D-alanyl-D-alanine carboxypeptidase MF133_15360 PF09335 SNARE associated Golgi protein MF133_15365 PF01595 Cyclin M transmembrane N-terminal domain MF133_15365 PF00571 CBS domain MF133_15365 PF03471 Transporter associated domain MF133_15370 PF10458 Valyl tRNA synthetase tRNA binding arm MF133_15370 PF00133 tRNA synthetases class I (I, L, M and V) MF133_15370 PF08264 Anticodon-binding domain of tRNA MF133_15375 PF04364 DNA polymerase III chi subunit, HolC MF133_15380 PF00883 Cytosol aminopeptidase family, catalytic domain MF133_15380 PF02789 Cytosol aminopeptidase family, N-terminal domain MF133_15385 PF03739 Lipopolysaccharide export system permease LptF/LptG MF133_15390 PF03739 Lipopolysaccharide export system permease LptF/LptG MF133_15410 PF00909 Ammonium Transporter Family MF133_15415 PF05958 tRNA (Uracil-5-)-methyltransferase MF133_15415 PF01938 TRAM domain MF133_15430 PF07963 Prokaryotic N-terminal methylation motif MF133_15435 PF01026 TatD related DNase MF133_15440 PF07670 Nucleoside recognition MF133_15440 PF07662 Na+ dependent nucleoside transporter C-terminus MF133_15440 PF01773 Na+ dependent nucleoside transporter N-terminus MF133_15450 PF01791 DeoC/LacD family aldolase MF133_15455 PF02885 Glycosyl transferase family, helical bundle domain MF133_15455 PF00591 Glycosyl transferase family, a/b domain MF133_15455 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain MF133_15460 PF01676 Metalloenzyme superfamily MF133_15465 PF01048 Phosphorylase superfamily MF133_15470 PF00990 Diguanylate cyclase, GGDEF domain MF133_15470 PF00563 EAL domain MF133_15470 PF08448 PAS fold MF133_15470 PF13426 PAS domain MF133_15470 PF05231 MASE1 MF133_15470 PF08447 PAS fold MF133_15480 PF18429 Domain of unknown function (DUF5609) MF133_15495 PF18073 Rubredoxin metal binding domain MF133_15500 PF07238 PilZ domain MF133_15505 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ MF133_15510 PF00216 Bacterial DNA-binding protein MF133_15525 PF01207 Dihydrouridine synthase (Dus) MF133_15575 PF01475 Ferric uptake regulator family MF133_15590 PF05525 Branched-chain amino acid transport protein MF133_15595 PF05175 Methyltransferase small domain MF133_15600 PF00270 DEAD/DEAH box helicase MF133_15600 PF00271 Helicase conserved C-terminal domain MF133_15605 PF03883 Peroxide stress protein YaaA MF133_15610 PF00437 Type II/IV secretion system protein MF133_15615 PF00437 Type II/IV secretion system protein MF133_15620 PF01168 Alanine racemase, N-terminal domain MF133_15625 PF14748 Pyrroline-5-carboxylate reductase dimerisation MF133_15625 PF03807 NADP oxidoreductase coenzyme F420-dependent MF133_15630 PF02325 YGGT family MF133_15635 PF02594 Uncharacterised ACR, YggU family COG1872 MF133_15655 PF06062 Uncharacterised protein family (UPF0231) MF133_15660 PF05651 Putative sugar diacid recognition MF133_15660 PF17853 GGDEF-like domain MF133_15660 PF13556 PucR C-terminal helix-turn-helix domain MF133_15665 PF02447 GntP family permease MF133_15670 PF02595 Glycerate kinase family MF133_15680 PF00255 Glutathione peroxidase MF133_15685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_15685 PF03466 LysR substrate binding domain MF133_15695 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MF133_15695 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MF133_15700 PF00472 RF-1 domain MF133_15705 PF00543 Nitrogen regulatory protein P-II MF133_15720 PF00005 ABC transporter MF133_15720 PF08402 TOBE domain MF133_15725 PF04261 Dyp-type peroxidase family MF133_15730 PF01316 Arginine repressor, DNA binding domain MF133_15730 PF02863 Arginine repressor, C-terminal domain MF133_15735 PF00005 ABC transporter MF133_15740 PF00497 Bacterial extracellular solute-binding proteins, family 3 MF133_15745 PF00528 Binding-protein-dependent transport system inner membrane component MF133_15750 PF00528 Binding-protein-dependent transport system inner membrane component MF133_15755 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MF133_15755 PF00056 lactate/malate dehydrogenase, NAD binding domain MF133_15760 PF08238 Sel1 repeat MF133_15765 PF00042 Globin MF133_15765 PF00970 Oxidoreductase FAD-binding domain MF133_15765 PF00175 Oxidoreductase NAD-binding domain MF133_15770 PF02082 Transcriptional regulator MF133_15775 PF00571 CBS domain MF133_15775 PF03471 Transporter associated domain MF133_15775 PF01595 Cyclin M transmembrane N-terminal domain MF133_15780 PF01578 Cytochrome C assembly protein MF133_15785 PF00448 SRP54-type protein, GTPase domain MF133_15785 PF02881 SRP54-type protein, helical bundle domain MF133_15785 PF02978 Signal peptide binding domain MF133_15790 PF00886 Ribosomal protein S16 MF133_15795 PF05239 PRC-barrel domain MF133_15795 PF01782 RimM N-terminal domain MF133_15800 PF01746 tRNA (Guanine-1)-methyltransferase MF133_15805 PF01245 Ribosomal protein L19 MF133_15815 PF02976 DNA mismatch repair enzyme MutH MF133_15825 PF00293 NUDIX domain MF133_15830 PF01590 GAF domain MF133_15830 PF05524 PEP-utilising enzyme, N-terminal MF133_15830 PF00391 PEP-utilising enzyme, mobile domain MF133_15830 PF02896 PEP-utilising enzyme, TIM barrel domain MF133_15835 PF01790 Prolipoprotein diacylglyceryl transferase MF133_15840 PF00303 Thymidylate synthase MF133_15845 PF06965 Na+/H+ antiporter 1 MF133_15855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_15855 PF03466 LysR substrate binding domain MF133_15860 PF01022 Bacterial regulatory protein, arsR family MF133_15865 PF01649 Ribosomal protein S20 MF133_15870 PF03023 Lipid II flippase MurJ MF133_15875 PF06574 FAD synthetase MF133_15875 PF01687 Riboflavin kinase MF133_15880 PF00133 tRNA synthetases class I (I, L, M and V) MF133_15880 PF06827 Zinc finger found in FPG and IleRS MF133_15880 PF08264 Anticodon-binding domain of tRNA MF133_15885 PF01252 Signal peptidase (SPase) II MF133_15890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MF133_15895 PF02401 LytB protein MF133_15900 PF07963 Prokaryotic N-terminal methylation motif MF133_15900 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor MF133_15935 PF00795 Carbon-nitrogen hydrolase MF133_15935 PF02540 NAD synthase MF133_15940 PF00543 Nitrogen regulatory protein P-II MF133_15950 PF02664 S-Ribosylhomocysteinase (LuxS) MF133_15955 PF00990 Diguanylate cyclase, GGDEF domain MF133_15960 PF00773 RNB domain MF133_15960 PF00575 S1 RNA binding domain MF133_15960 PF17876 Cold shock domain MF133_15960 PF08461 Ribonuclease R winged-helix domain MF133_15960 PF08206 Ribonuclease B OB domain MF133_15965 PF00588 SpoU rRNA Methylase family MF133_15965 PF08032 RNA 2'-O ribose methyltransferase substrate binding MF133_15975 PF13673 Acetyltransferase (GNAT) domain MF133_15980 PF02272 DHHA1 domain MF133_15980 PF01411 tRNA synthetases class II (A) MF133_15980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MF133_15985 PF01566 Natural resistance-associated macrophage protein MF133_15990 PF01250 Ribosomal protein S6 MF133_15995 PF01084 Ribosomal protein S18 MF133_16000 PF03948 Ribosomal protein L9, C-terminal domain MF133_16000 PF01281 Ribosomal protein L9, N-terminal domain MF133_16005 PF00970 Oxidoreductase FAD-binding domain MF133_16005 PF00175 Oxidoreductase NAD-binding domain MF133_16025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MF133_16040 PF09335 SNARE associated Golgi protein MF133_16045 PF00675 Insulinase (Peptidase family M16) MF133_16045 PF05193 Peptidase M16 inactive domain MF133_16050 PF04262 Glutamate-cysteine ligase MF133_16055 PF03605 Anaerobic c4-dicarboxylate membrane transporter MF133_16060 PF00206 Lyase MF133_16060 PF10415 Fumarase C C-terminus MF133_16065 PF04186 FxsA cytoplasmic membrane protein MF133_16070 PF01554 MatE MF133_16075 PF00166 Chaperonin 10 Kd subunit MF133_16080 PF00118 TCP-1/cpn60 chaperonin family MF133_16090 PF03707 Bacterial signalling protein N terminal repeat MF133_16090 PF00990 Diguanylate cyclase, GGDEF domain MF133_16090 PF00563 EAL domain MF133_16100 PF00849 RNA pseudouridylate synthase MF133_16105 PF00271 Helicase conserved C-terminal domain MF133_16105 PF18337 RapA N-terminal Tudor like domain MF133_16105 PF12137 RNA polymerase recycling family C-terminal MF133_16105 PF00176 SNF2 family N-terminal domain MF133_16105 PF18339 RapA N-terminal Tudor like domain 1 MF133_16150 PF00528 Binding-protein-dependent transport system inner membrane component MF133_16155 PF00528 Binding-protein-dependent transport system inner membrane component MF133_16160 PF12857 TOBE-like domain MF133_16160 PF00005 ABC transporter MF133_16165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_16165 PF03466 LysR substrate binding domain MF133_16170 PF18416 N-acetylglucosamine binding protein domain 2 MF133_16170 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading MF133_16175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_16175 PF00672 HAMP domain MF133_16175 PF02743 Cache domain MF133_16200 PF11230 Protein of unknown function (DUF3029) MF133_16205 PF04055 Radical SAM superfamily MF133_16215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_16215 PF03466 LysR substrate binding domain MF133_16220 PF00155 Aminotransferase class I and II MF133_16225 PF11658 Cellulose biosynthesis protein BcsG MF133_16235 PF06564 Cellulose biosynthesis protein BcsQ MF133_16240 PF00535 Glycosyl transferase family 2 MF133_16240 PF07238 PilZ domain MF133_16240 PF03552 Cellulose synthase MF133_16245 PF03170 Bacterial cellulose synthase subunit MF133_16250 PF01270 Glycosyl hydrolases family 8 MF133_16255 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) MF133_16265 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) MF133_16265 PF13176 Tetratricopeptide repeat MF133_16270 PF02583 Metal-sensitive transcriptional repressor MF133_16285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MF133_16285 PF11852 Domain of unknown function (DUF3372) MF133_16285 PF03714 Bacterial pullanase-associated domain MF133_16285 PF18494 Pullulanase Ins domain MF133_16285 PF17967 Pullulanase N2 domain MF133_16290 PF00403 Heavy-metal-associated domain MF133_16295 PF08534 Redoxin MF133_16300 PF00270 DEAD/DEAH box helicase MF133_16300 PF00271 Helicase conserved C-terminal domain MF133_16305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_16305 PF08447 PAS fold MF133_16315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MF133_16325 PF10952 Protein of unknown function (DUF2753) MF133_16330 PF00378 Enoyl-CoA hydratase/isomerase MF133_16345 PF00106 short chain dehydrogenase MF133_16350 PF00929 Exonuclease MF133_16355 PF03129 Anticodon binding domain MF133_16355 PF04073 Aminoacyl-tRNA editing domain MF133_16355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MF133_16360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_16360 PF00672 HAMP domain MF133_16365 PF07499 RuvA, C-terminal domain MF133_16365 PF01330 RuvA N terminal domain MF133_16370 PF05491 RuvB C-terminal winged helix domain MF133_16370 PF17864 RuvB AAA lid domain MF133_16370 PF05496 Holliday junction DNA helicase RuvB P-loop domain MF133_16375 PF01654 Cytochrome bd terminal oxidase subunit I MF133_16380 PF02322 Cytochrome bd terminal oxidase subunit II MF133_16385 PF08173 Membrane bound YbgT-like protein MF133_16390 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) MF133_16395 PF03061 Thioesterase superfamily MF133_16400 PF01618 MotA/TolQ/ExbB proton channel family MF133_16405 PF02472 Biopolymer transport protein ExbD/TolR MF133_16415 PF07676 WD40-like Beta Propeller Repeat MF133_16415 PF04052 TolB amino-terminal domain MF133_16420 PF00691 OmpA family MF133_16425 PF16331 TolA binding protein trimerisation MF133_16425 PF13174 Tetratricopeptide repeat MF133_16500 PF00672 HAMP domain MF133_16500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_16505 PF02445 Quinolinate synthetase A protein MF133_16510 PF01263 Aldose 1-epimerase MF133_16515 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MF133_16515 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MF133_16520 PF02446 4-alpha-glucanotransferase MF133_16525 PF00128 Alpha amylase, catalytic domain MF133_16525 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MF133_16525 PF02806 Alpha amylase, C-terminal all-beta domain MF133_16530 PF00128 Alpha amylase, catalytic domain MF133_16530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MF133_16550 PF00293 NUDIX domain MF133_16555 PF16884 N-terminal domain of oxidoreductase MF133_16555 PF00107 Zinc-binding dehydrogenase MF133_16560 PF01047 MarR family MF133_16575 PF01037 Lrp/AsnC ligand binding domain MF133_16585 PF07690 Major Facilitator Superfamily MF133_16605 PF00209 Sodium:neurotransmitter symporter family MF133_16610 PF00209 Sodium:neurotransmitter symporter family MF133_16625 PF00155 Aminotransferase class I and II MF133_16625 PF00392 Bacterial regulatory proteins, gntR family MF133_16640 PF01177 Asp/Glu/Hydantoin racemase MF133_16650 PF00501 AMP-binding enzyme MF133_16660 PF00583 Acetyltransferase (GNAT) family MF133_16670 PF07728 AAA domain (dynein-related subfamily) MF133_16670 PF12592 Protein of unknown function (DUF3763) MF133_16670 PF17868 AAA lid domain MF133_16675 PF05762 VWA domain containing CoxE-like protein MF133_16680 PF00563 EAL domain MF133_16680 PF00990 Diguanylate cyclase, GGDEF domain MF133_16680 PF08448 PAS fold MF133_16685 PF00990 Diguanylate cyclase, GGDEF domain MF133_16685 PF00072 Response regulator receiver domain MF133_16690 PF00009 Elongation factor Tu GTP binding domain MF133_16690 PF03144 Elongation factor Tu domain 2 MF133_16690 PF16658 Class II release factor RF3, C-terminal domain MF133_16700 PF00583 Acetyltransferase (GNAT) family MF133_16705 PF12804 MobA-like NTP transferase domain MF133_16705 PF00132 Bacterial transferase hexapeptide (six repeats) MF133_16710 PF00583 Acetyltransferase (GNAT) family MF133_16715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MF133_16730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_16730 PF03466 LysR substrate binding domain MF133_16735 PF04371 Porphyromonas-type peptidyl-arginine deiminase MF133_16740 PF01425 Amidase MF133_16750 PF00753 Metallo-beta-lactamase superfamily MF133_16770 PF12833 Helix-turn-helix domain MF133_16770 PF02311 AraC-like ligand binding domain MF133_16775 PF00111 2Fe-2S iron-sulfur cluster binding domain MF133_16775 PF00175 Oxidoreductase NAD-binding domain MF133_16775 PF00970 Oxidoreductase FAD-binding domain MF133_16780 PF00271 Helicase conserved C-terminal domain MF133_16780 PF00270 DEAD/DEAH box helicase MF133_16785 PF00990 Diguanylate cyclase, GGDEF domain MF133_16790 PF05643 Putative bacterial lipoprotein (DUF799) MF133_16800 PF03783 Curli production assembly/transport component CsgG MF133_16820 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase MF133_16830 PF00005 ABC transporter MF133_16830 PF02687 FtsX-like permease family MF133_16830 PF12704 MacB-like periplasmic core domain MF133_16835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MF133_16840 PF00486 Transcriptional regulatory protein, C terminal MF133_16840 PF00072 Response regulator receiver domain MF133_16845 PF16527 Two-component sensor protein CpxA, periplasmic domain MF133_16845 PF00672 HAMP domain MF133_16845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_16845 PF00512 His Kinase A (phospho-acceptor) domain MF133_16865 PF00445 Ribonuclease T2 family MF133_16870 PF03060 Nitronate monooxygenase MF133_16895 PF01810 LysE type translocator MF133_16950 PF02954 Bacterial regulatory protein, Fis family MF133_16955 PF01207 Dihydrouridine synthase (Dus) MF133_16965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MF133_16995 PF00072 Response regulator receiver domain MF133_17000 PF00854 POT family MF133_17005 PF00483 Nucleotidyl transferase MF133_17015 PF00459 Inositol monophosphatase family MF133_17020 PF03795 YCII-related domain MF133_17025 PF04279 Intracellular septation protein A MF133_17030 PF00282 Pyridoxal-dependent decarboxylase conserved domain MF133_17035 PF03006 Haemolysin-III related MF133_17040 PF02080 TrkA-C domain MF133_17040 PF06826 Predicted Permease Membrane Region MF133_17050 PF07690 Major Facilitator Superfamily MF133_17055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_17055 PF03466 LysR substrate binding domain MF133_17060 PF07504 Fungalysin/Thermolysin Propeptide Motif MF133_17060 PF03413 Peptidase propeptide and YPEB domain MF133_17060 PF01447 Thermolysin metallopeptidase, catalytic domain MF133_17060 PF02868 Thermolysin metallopeptidase, alpha-helical domain MF133_17060 PF04151 Bacterial pre-peptidase C-terminal domain MF133_17065 PF13302 Acetyltransferase (GNAT) domain MF133_17070 PF13302 Acetyltransferase (GNAT) domain MF133_17080 PF04074 YhcH/YjgK/YiaL MF133_17085 PF00871 Acetokinase family MF133_17090 PF00924 Mechanosensitive ion channel MF133_17095 PF17969 L,D-transpeptidase C-terminal domain MF133_17095 PF03734 L,D-transpeptidase catalytic domain MF133_17100 PF00474 Sodium:solute symporter family MF133_17110 PF13411 MerR HTH family regulatory protein MF133_17120 PF01939 Endonuclease NucS MF133_17155 PF02525 Flavodoxin-like fold MF133_17160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_17160 PF03466 LysR substrate binding domain MF133_17165 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ MF133_17175 PF12848 ABC transporter MF133_17175 PF00005 ABC transporter MF133_17180 PF00478 IMP dehydrogenase / GMP reductase domain MF133_17180 PF00571 CBS domain MF133_17185 PF00267 Gram-negative porin MF133_17190 PF01584 CheW-like domain MF133_17190 PF00072 Response regulator receiver domain MF133_17195 PF13472 GDSL-like Lipase/Acylhydrolase family MF133_17200 PF00005 ABC transporter MF133_17210 PF08338 Domain of unknown function (DUF1731) MF133_17210 PF01370 NAD dependent epimerase/dehydratase family MF133_17215 PF00563 EAL domain MF133_17215 PF12792 CSS motif domain associated with EAL MF133_17225 PF04389 Peptidase family M28 MF133_17225 PF02225 PA domain MF133_17230 PF02390 Putative methyltransferase MF133_17235 PF04320 Protein with unknown function (DUF469) MF133_17240 PF04960 Glutaminase MF133_17245 PF00581 Rhodanese-like domain MF133_17250 PF06082 Exopolysaccharide biosynthesis protein YbjH MF133_17255 PF06251 Capsule biosynthesis GfcC MF133_17260 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF MF133_17280 PF06004 Bacterial protein of unknown function (DUF903) MF133_17285 PF00664 ABC transporter transmembrane region MF133_17285 PF00005 ABC transporter MF133_17290 PF00561 alpha/beta hydrolase fold MF133_17310 PF00589 Phage integrase family MF133_17340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MF133_17350 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MF133_17350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MF133_17355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_17355 PF03466 LysR substrate binding domain MF133_17360 PF12706 Beta-lactamase superfamily domain MF133_17365 PF01965 DJ-1/PfpI family MF133_17370 PF02899 Phage integrase, N-terminal SAM-like domain MF133_17370 PF00589 Phage integrase family MF133_17450 PF06877 Regulator of ribonuclease activity B MF133_17455 PF00990 Diguanylate cyclase, GGDEF domain MF133_17455 PF00563 EAL domain MF133_17455 PF03707 Bacterial signalling protein N terminal repeat MF133_17475 PF09905 DNA-binding protein VF530 MF133_17480 PF02666 Phosphatidylserine decarboxylase MF133_17485 PF03193 RsgA GTPase MF133_17490 PF00929 Exonuclease MF133_17530 PF13356 Arm DNA-binding domain MF133_17530 PF14659 Phage integrase, N-terminal SAM-like domain MF133_17530 PF00589 Phage integrase family MF133_17540 PF01381 Helix-turn-helix MF133_17545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_17545 PF03466 LysR substrate binding domain MF133_17550 PF00582 Universal stress protein family MF133_17555 PF00916 Sulfate permease family MF133_17555 PF01740 STAS domain MF133_17560 PF06965 Na+/H+ antiporter 1 MF133_17565 PF08534 Redoxin MF133_17570 PF02683 Cytochrome C biogenesis protein transmembrane region MF133_17585 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MF133_17585 PF03625 Domain of unknown function DUF302 MF133_17600 PF05114 Protein of unknown function (DUF692) MF133_17610 PF04542 Sigma-70 region 2 MF133_17610 PF08281 Sigma-70, region 4 MF133_17620 PF06965 Na+/H+ antiporter 1 MF133_17635 PF01609 Transposase DDE domain MF133_17635 PF05598 Transposase domain (DUF772) MF133_17645 PF04542 Sigma-70 region 2 MF133_17645 PF08281 Sigma-70, region 4 MF133_17650 PF03358 NADPH-dependent FMN reductase MF133_17655 PF03960 ArsC family MF133_17660 PF01758 Sodium Bile acid symporter family MF133_17665 PF02374 Anion-transporting ATPase MF133_17670 PF06953 Arsenical resistance operon trans-acting repressor ArsD MF133_17685 PF01022 Bacterial regulatory protein, arsR family MF133_17735 PF04002 RadC-like JAB domain MF133_17940 PF00809 Pterin binding enzyme MF133_17955 PF00004 ATPase family associated with various cellular activities (AAA) MF133_17955 PF07724 AAA domain (Cdc48 subfamily) MF133_17985 PF00583 Acetyltransferase (GNAT) family MF133_18015 PF01636 Phosphotransferase enzyme family MF133_18035 PF00753 Metallo-beta-lactamase superfamily MF133_18045 PF07690 Major Facilitator Superfamily MF133_18055 PF00440 Bacterial regulatory proteins, tetR family MF133_18055 PF02909 Tetracyclin repressor-like, C-terminal domain MF133_18060 PF07690 Major Facilitator Superfamily MF133_18065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_18065 PF03466 LysR substrate binding domain MF133_18080 PF09299 Mu transposase, C-terminal MF133_18080 PF00665 Integrase core domain MF133_18095 PF01131 DNA topoisomerase MF133_18095 PF01751 Toprim domain MF133_18100 PF00436 Single-strand binding protein family MF133_18135 PF13614 AAA domain MF133_18150 PF00313 'Cold-shock' DNA-binding domain MF133_18160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_18160 PF00672 HAMP domain MF133_18165 PF00749 tRNA synthetases class I (E and Q), catalytic domain MF133_18170 PF00749 tRNA synthetases class I (E and Q), catalytic domain MF133_18205 PF00704 Glycosyl hydrolases family 18 MF133_18205 PF06483 Chitinase C MF133_18220 PF02472 Biopolymer transport protein ExbD/TolR MF133_18225 PF01618 MotA/TolQ/ExbB proton channel family MF133_18230 PF01618 MotA/TolQ/ExbB proton channel family MF133_18240 PF07715 TonB-dependent Receptor Plug Domain MF133_18240 PF00593 TonB dependent receptor MF133_18245 PF00528 Binding-protein-dependent transport system inner membrane component MF133_18250 PF00528 Binding-protein-dependent transport system inner membrane component MF133_18250 PF12911 N-terminal TM domain of oligopeptide transport permease C MF133_18255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MF133_18260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MF133_18260 PF00005 ABC transporter MF133_18265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MF133_18265 PF00005 ABC transporter MF133_18270 PF07687 Peptidase dimerisation domain MF133_18270 PF01546 Peptidase family M20/M25/M40 MF133_18515 PF12826 Helix-hairpin-helix motif MF133_18515 PF00533 BRCA1 C Terminus (BRCT) domain MF133_18515 PF01653 NAD-dependent DNA ligase adenylation domain MF133_18515 PF03120 NAD-dependent DNA ligase OB-fold domain MF133_18515 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MF133_18530 PF02899 Phage integrase, N-terminal SAM-like domain MF133_18530 PF00589 Phage integrase family MF133_18535 PF00156 Phosphoribosyl transferase domain MF133_18540 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) MF133_18545 PF07417 Sigma factor-binding transcriptional regulator Crl MF133_18550 PF00696 Amino acid kinase family MF133_18550 PF01472 PUA domain MF133_18555 PF00171 Aldehyde dehydrogenase family MF133_18565 PF00582 Universal stress protein family MF133_18580 PF01568 Molydopterin dinucleotide binding domain MF133_18580 PF00384 Molybdopterin oxidoreductase MF133_18580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MF133_18580 PF04324 BFD-like [2Fe-2S] binding domain MF133_18600 PF00005 ABC transporter MF133_18605 PF00528 Binding-protein-dependent transport system inner membrane component MF133_18610 PF00005 ABC transporter MF133_18615 PF04324 BFD-like [2Fe-2S] binding domain MF133_18615 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MF133_18615 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MF133_18615 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF133_18615 PF13806 Rieske-like [2Fe-2S] domain MF133_18615 PF18267 Rubredoxin NAD+ reductase C-terminal domain MF133_18620 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF133_18620 PF18267 Rubredoxin NAD+ reductase C-terminal domain MF133_18620 PF13806 Rieske-like [2Fe-2S] domain MF133_18620 PF04324 BFD-like [2Fe-2S] binding domain MF133_18620 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MF133_18620 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MF133_18625 PF00294 pfkB family carbohydrate kinase MF133_18630 PF04227 Indigoidine synthase A like protein MF133_18640 PF00194 Eukaryotic-type carbonic anhydrase MF133_18655 PF00994 Probable molybdopterin binding domain MF133_18665 PF06738 Putative threonine/serine exporter MF133_18670 PF12821 Threonine/Serine exporter, ThrE MF133_18675 PF00186 Dihydrofolate reductase MF133_18680 PF00005 ABC transporter MF133_18680 PF00571 CBS domain MF133_18685 PF00528 Binding-protein-dependent transport system inner membrane component MF133_18690 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MF133_18695 PF01507 Phosphoadenosine phosphosulfate reductase family MF133_18700 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MF133_18700 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MF133_18705 PF00667 FAD binding domain MF133_18705 PF00175 Oxidoreductase NAD-binding domain MF133_18705 PF00258 Flavodoxin MF133_18710 PF02567 Phenazine biosynthesis-like protein MF133_18715 PF00152 tRNA synthetases class II (D, K and N) MF133_18715 PF01336 OB-fold nucleic acid binding domain MF133_18725 PF02743 Cache domain MF133_18725 PF00672 HAMP domain MF133_18725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_18730 PF03616 Sodium/glutamate symporter MF133_18740 PF07023 Protein of unknown function (DUF1315) MF133_18745 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MF133_18745 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MF133_18760 PF01343 Peptidase family S49 MF133_18770 PF00881 Nitroreductase family MF133_18785 PF00132 Bacterial transferase hexapeptide (six repeats) MF133_18785 PF12464 Maltose acetyltransferase MF133_18795 PF00107 Zinc-binding dehydrogenase MF133_18795 PF08240 Alcohol dehydrogenase GroES-like domain MF133_18800 PF03466 LysR substrate binding domain MF133_18800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_18805 PF00367 phosphotransferase system, EIIB MF133_18805 PF02378 Phosphotransferase system, EIIC MF133_18805 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MF133_18810 PF00474 Sodium:solute symporter family MF133_18815 PF06196 Protein of unknown function (DUF997) MF133_18820 PF02785 Biotin carboxylase C-terminal domain MF133_18820 PF00289 Biotin carboxylase, N-terminal domain MF133_18820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MF133_18825 PF00364 Biotin-requiring enzyme MF133_18830 PF01220 Dehydroquinase class II MF133_18835 PF16177 Acetyl-coenzyme A synthetase N-terminus MF133_18835 PF00501 AMP-binding enzyme MF133_18835 PF13193 AMP-binding enzyme C-terminal domain MF133_18850 PF02613 Nitrate reductase delta subunit MF133_18860 PF00464 Serine hydroxymethyltransferase MF133_18870 PF03477 ATP cone domain MF133_18875 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MF133_18875 PF01872 RibD C-terminal domain MF133_18880 PF00677 Lumazine binding domain MF133_18885 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MF133_18885 PF00925 GTP cyclohydrolase II MF133_18890 PF00885 6,7-dimethyl-8-ribityllumazine synthase MF133_18895 PF01029 NusB family MF133_18900 PF00586 AIR synthase related protein, N-terminal domain MF133_18900 PF02769 AIR synthase related protein, C-terminal domain MF133_18905 PF04608 Phosphatidylglycerophosphatase A MF133_18910 PF00005 ABC transporter MF133_18910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MF133_18915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MF133_18920 PF00528 Binding-protein-dependent transport system inner membrane component MF133_18925 PF00528 Binding-protein-dependent transport system inner membrane component MF133_18925 PF12911 N-terminal TM domain of oligopeptide transport permease C MF133_18930 PF02780 Transketolase, C-terminal domain MF133_18930 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MF133_18930 PF02779 Transketolase, pyrimidine binding domain MF133_18935 PF00348 Polyprenyl synthetase MF133_18940 PF02609 Exonuclease VII small subunit MF133_18945 PF01618 MotA/TolQ/ExbB proton channel family MF133_18950 PF13677 Membrane MotB of proton-channel complex MotA/MotB MF133_18950 PF00691 OmpA family MF133_18955 PF01272 Transcription elongation factor, GreA/GreB, C-term MF133_18955 PF03449 Transcription elongation factor, N-terminal MF133_18965 PF01985 CRS1 / YhbY (CRM) domain MF133_18970 PF01728 FtsJ-like methyltransferase MF133_18975 PF00004 ATPase family associated with various cellular activities (AAA) MF133_18975 PF17862 AAA+ lid domain MF133_18975 PF06480 FtsH Extracellular MF133_18975 PF01434 Peptidase family M41 MF133_18980 PF00809 Pterin binding enzyme MF133_18985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MF133_18985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MF133_18985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MF133_18985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MF133_18990 PF00121 Triosephosphate isomerase MF133_18995 PF03840 Preprotein translocase SecG subunit MF133_19010 PF17384 RimP C-terminal SH3 domain MF133_19010 PF02576 RimP N-terminal domain MF133_19015 PF13184 NusA-like KH domain MF133_19015 PF08529 NusA N-terminal domain MF133_19015 PF00575 S1 RNA binding domain MF133_19020 PF00009 Elongation factor Tu GTP binding domain MF133_19020 PF04760 Translation initiation factor IF-2, N-terminal region MF133_19020 PF08364 Bacterial translation initiation factor IF-2 associated region MF133_19020 PF11987 Translation-initiation factor 2 MF133_19025 PF02033 Ribosome-binding factor A MF133_19030 PF09157 Pseudouridine synthase II TruB, C-terminal MF133_19030 PF16198 tRNA pseudouridylate synthase B C-terminal domain MF133_19030 PF01509 TruB family pseudouridylate synthase (N terminal domain) MF133_19035 PF00312 Ribosomal protein S15 MF133_19040 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MF133_19040 PF01138 3' exoribonuclease family, domain 1 MF133_19040 PF00013 KH domain MF133_19040 PF00575 S1 RNA binding domain MF133_19040 PF03725 3' exoribonuclease family, domain 2 MF133_19045 PF07690 Major Facilitator Superfamily MF133_19050 PF02635 DsrE/DsrF-like family MF133_19055 PF06476 Protein of unknown function (DUF1090) MF133_19060 PF12838 4Fe-4S dicluster domain MF133_19065 PF01136 Peptidase family U32 MF133_19065 PF16325 Peptidase family U32 C-terminal domain MF133_19070 PF17969 L,D-transpeptidase C-terminal domain MF133_19070 PF03734 L,D-transpeptidase catalytic domain MF133_19085 PF01523 Putative modulator of DNA gyrase MF133_19090 PF01523 Putative modulator of DNA gyrase MF133_19095 PF00258 Flavodoxin MF133_19100 PF00589 Phage integrase family MF133_19100 PF02899 Phage integrase, N-terminal SAM-like domain MF133_19105 PF01741 Large-conductance mechanosensitive channel, MscL MF133_19115 PF02272 DHHA1 domain MF133_19115 PF17768 RecJ OB domain MF133_19115 PF01368 DHH family MF133_19120 PF13411 MerR HTH family regulatory protein MF133_19135 PF02508 Rnf-Nqr subunit, membrane protein MF133_19150 PF00665 Integrase core domain MF133_19165 PF03852 DNA mismatch endonuclease Vsr MF133_19175 PF00145 C-5 cytosine-specific DNA methylase MF133_19190 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MF133_19190 PF04055 Radical SAM superfamily MF133_19195 PF03099 Biotin/lipoate A/B protein ligase family MF133_19200 PF04359 Protein of unknown function (DUF493) MF133_19205 PF07943 Penicillin-binding protein 5, C-terminal domain MF133_19205 PF00768 D-alanyl-D-alanine carboxypeptidase MF133_19210 PF03330 Lytic transglycolase MF133_19210 PF05036 Sporulation related domain MF133_19215 PF13406 Transglycosylase SLT domain MF133_19220 PF01098 Cell cycle protein MF133_19225 PF03717 Penicillin-binding Protein dimerisation domain MF133_19225 PF00905 Penicillin binding protein transpeptidase domain MF133_19230 PF02590 Predicted SPOUT methyltransferase MF133_19240 PF01467 Cytidylyltransferase-like MF133_19265 PF08264 Anticodon-binding domain of tRNA MF133_19265 PF00133 tRNA synthetases class I (I, L, M and V) MF133_19265 PF13603 Leucyl-tRNA synthetase, Domain 2 MF133_19270 PF07295 Zinc-ribbon containing domain MF133_19275 PF00795 Carbon-nitrogen hydrolase MF133_19280 PF00571 CBS domain MF133_19280 PF03471 Transporter associated domain MF133_19285 PF02130 Uncharacterized protein family UPF0054 MF133_19290 PF02562 PhoH-like protein MF133_19295 PF00919 Uncharacterized protein family UPF0004 MF133_19295 PF04055 Radical SAM superfamily MF133_19295 PF01938 TRAM domain MF133_19300 PF01494 FAD binding domain MF133_19305 PF00857 Isochorismatase family MF133_19310 PF03466 LysR substrate binding domain MF133_19310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_19320 PF13419 Haloacid dehalogenase-like hydrolase MF133_19325 PF00990 Diguanylate cyclase, GGDEF domain MF133_19335 PF17152 Periplasmic sensor domain MF133_19335 PF00990 Diguanylate cyclase, GGDEF domain MF133_19345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MF133_19345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MF133_19355 PF03171 2OG-Fe(II) oxygenase superfamily MF133_19355 PF14226 non-haem dioxygenase in morphine synthesis N-terminal MF133_19360 PF03180 NLPA lipoprotein MF133_19370 PF00528 Binding-protein-dependent transport system inner membrane component MF133_19375 PF01132 Elongation factor P (EF-P) OB domain MF133_19375 PF08207 Elongation factor P (EF-P) KOW-like domain MF133_19375 PF09285 Elongation factor P, C-terminal MF133_19385 PF00478 IMP dehydrogenase / GMP reductase domain MF133_19390 PF08443 RimK-like ATP-grasp domain MF133_19390 PF18030 RimK PreATP-grasp domain MF133_19395 PF08521 Two-component sensor kinase N-terminal MF133_19395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_19395 PF00512 His Kinase A (phospho-acceptor) domain MF133_19400 PF00072 Response regulator receiver domain MF133_19400 PF00486 Transcriptional regulatory protein, C terminal MF133_19410 PF00106 short chain dehydrogenase MF133_19420 PF00501 AMP-binding enzyme MF133_19430 PF13847 Methyltransferase domain MF133_19435 PF06224 Winged helix DNA-binding domain MF133_19450 PF02313 Fumarate reductase subunit D MF133_19455 PF02300 Fumarate reductase subunit C MF133_19460 PF13085 2Fe-2S iron-sulfur cluster binding domain MF133_19460 PF13183 4Fe-4S dicluster domain MF133_19465 PF02910 Fumarate reductase flavoprotein C-term MF133_19465 PF00890 FAD binding domain MF133_19470 PF00672 HAMP domain MF133_19470 PF02743 Cache domain MF133_19470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_19475 PF03009 Glycerophosphoryl diester phosphodiesterase family MF133_19480 PF12794 Mechanosensitive ion channel inner membrane domain 1 MF133_19480 PF00924 Mechanosensitive ion channel MF133_19480 PF12795 Mechanosensitive ion channel porin domain MF133_19505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_19505 PF03466 LysR substrate binding domain MF133_19520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_19520 PF03466 LysR substrate binding domain MF133_19525 PF17092 Penicillin-binding protein OB-like domain MF133_19525 PF00912 Transglycosylase MF133_19525 PF00905 Penicillin binding protein transpeptidase domain MF133_19530 PF11104 Type IV pilus assembly protein PilM; MF133_19540 PF04350 Pilus assembly protein, PilO MF133_19550 PF07660 Secretin and TonB N terminus short domain MF133_19550 PF00263 Bacterial type II and III secretion system protein MF133_19550 PF03958 Bacterial type II/III secretion system short domain MF133_19550 PF11741 AMIN domain MF133_19555 PF01202 Shikimate kinase MF133_19560 PF01761 3-dehydroquinate synthase MF133_19565 PF05036 Sporulation related domain MF133_19570 PF02086 D12 class N6 adenine-specific DNA methyltransferase MF133_19575 PF00834 Ribulose-phosphate 3 epimerase family MF133_19580 PF13419 Haloacid dehalogenase-like hydrolase MF133_19585 PF00579 tRNA synthetases class I (W and Y) MF133_19595 PF00117 Glutamine amidotransferase class-I MF133_19600 PF00202 Aminotransferase class-III MF133_19605 PF04958 Arginine N-succinyltransferase beta subunit MF133_19610 PF00171 Aldehyde dehydrogenase family MF133_19625 PF13419 Haloacid dehalogenase-like hydrolase MF133_19630 PF07690 Major Facilitator Superfamily MF133_19640 PF07859 alpha/beta hydrolase fold MF133_19645 PF04266 ASCH domain MF133_19650 PF02080 TrkA-C domain MF133_19650 PF03600 Citrate transporter MF133_19695 PF01926 50S ribosome-binding GTPase MF133_19695 PF06071 Protein of unknown function (DUF933) MF133_19700 PF01195 Peptidyl-tRNA hydrolase MF133_19705 PF14572 Phosphoribosyl synthetase-associated domain MF133_19705 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MF133_19715 PF08544 GHMP kinases C terminal MF133_19715 PF00288 GHMP kinases N terminal domain MF133_19720 PF03550 Outer membrane lipoprotein LolB MF133_19725 PF01488 Shikimate / quinate 5-dehydrogenase MF133_19725 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MF133_19725 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MF133_19730 PF03462 PCRF domain MF133_19730 PF00472 RF-1 domain MF133_19735 PF13847 Methyltransferase domain MF133_19735 PF17827 PrmC N-terminal domain MF133_19745 PF13369 Transglutaminase-like superfamily MF133_19750 PF00793 DAHP synthetase I family MF133_19755 PF00375 Sodium:dicarboxylate symporter family MF133_19765 PF03167 Uracil DNA glycosylase superfamily MF133_19780 PF00923 Transaldolase/Fructose-6-phosphate aldolase MF133_19785 PF01235 Sodium:alanine symporter family MF133_19790 PF00144 Beta-lactamase MF133_19795 PF07690 Major Facilitator Superfamily MF133_19800 PF03466 LysR substrate binding domain MF133_19800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_19805 PF03652 Holliday junction resolvase MF133_19810 PF02622 Uncharacterized ACR, COG1678 MF133_19815 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MF133_19815 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MF133_19820 PF04452 RNA methyltransferase MF133_19825 PF04231 Endonuclease I MF133_19830 PF17283 SprT-like zinc ribbon domain MF133_19830 PF10263 SprT-like family MF133_19835 PF02772 S-adenosylmethionine synthetase, central domain MF133_19835 PF00438 S-adenosylmethionine synthetase, N-terminal domain MF133_19835 PF02773 S-adenosylmethionine synthetase, C-terminal domain MF133_19840 PF02779 Transketolase, pyrimidine binding domain MF133_19840 PF02780 Transketolase, C-terminal domain MF133_19840 PF00456 Transketolase, thiamine diphosphate binding domain MF133_19850 PF01042 Endoribonuclease L-PSP MF133_19865 PF03702 Anhydro-N-acetylmuramic acid kinase MF133_19870 PF01476 LysM domain MF133_19870 PF01551 Peptidase family M23 MF133_19870 PF08525 Opacity-associated protein A N-terminal motif MF133_19875 PF00579 tRNA synthetases class I (W and Y) MF133_19880 PF01204 Trehalase MF133_19890 PF01161 Phosphatidylethanolamine-binding protein MF133_19895 PF00709 Adenylosuccinate synthetase MF133_19900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_19900 PF03466 LysR substrate binding domain MF133_19910 PF00155 Aminotransferase class I and II MF133_19915 PF07690 Major Facilitator Superfamily MF133_19920 PF03466 LysR substrate binding domain MF133_19920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_19925 PF00106 short chain dehydrogenase MF133_19930 PF08496 Peptidase family S49 N-terminal MF133_19930 PF01343 Peptidase family S49 MF133_19935 PF04996 Succinylarginine dihydrolase MF133_19940 PF01751 Toprim domain MF133_19940 PF01396 Topoisomerase DNA binding C4 zinc finger MF133_19940 PF01131 DNA topoisomerase MF133_19940 PF08272 Topoisomerase I zinc-ribbon-like MF133_19955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_19955 PF08447 PAS fold MF133_19960 PF02838 Glycosyl hydrolase family 20, domain 2 MF133_19960 PF00728 Glycosyl hydrolase family 20, catalytic domain MF133_19965 PF01869 BadF/BadG/BcrA/BcrD ATPase family MF133_19975 PF00005 ABC transporter MF133_19975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MF133_19980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MF133_19980 PF00005 ABC transporter MF133_19985 PF12911 N-terminal TM domain of oligopeptide transport permease C MF133_19985 PF00528 Binding-protein-dependent transport system inner membrane component MF133_19995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MF133_20000 PF00919 Uncharacterized protein family UPF0004 MF133_20000 PF04055 Radical SAM superfamily MF133_20000 PF18693 TRAM domain MF133_20005 PF00072 Response regulator receiver domain MF133_20010 PF01022 Bacterial regulatory protein, arsR family MF133_20015 PF01758 Sodium Bile acid symporter family MF133_20020 PF03960 ArsC family MF133_20030 PF02049 Flagellar hook-basal body complex protein FliE MF133_20035 PF01514 Secretory protein of YscJ/FliF family MF133_20035 PF08345 Flagellar M-ring protein C-terminal MF133_20040 PF01706 FliG C-terminal domain MF133_20040 PF14842 FliG N-terminal domain MF133_20040 PF14841 FliG middle domain MF133_20050 PF18269 T3SS EscN ATPase C-terminal domain MF133_20050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MF133_20070 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MF133_20070 PF02154 Flagellar motor switch protein FliM MF133_20075 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MF133_20080 PF04347 Flagellar biosynthesis protein, FliO MF133_20085 PF00813 FliP family MF133_20090 PF01313 Bacterial export proteins, family 3 MF133_20095 PF01311 Bacterial export proteins, family 1 MF133_20100 PF01312 FlhB HrpN YscU SpaS Family MF133_20105 PF00771 FHIPEP family MF133_20110 PF00448 SRP54-type protein, GTPase domain MF133_20115 PF10609 NUBPL iron-transfer P-loop NTPase MF133_20120 PF04542 Sigma-70 region 2 MF133_20120 PF04545 Sigma-70, region 4 MF133_20120 PF04539 Sigma-70 region 3 MF133_20125 PF00072 Response regulator receiver domain MF133_20130 PF04344 Chemotaxis phosphatase, CheZ MF133_20135 PF00072 Response regulator receiver domain MF133_20135 PF02895 Signal transducing histidine kinase, homodimeric domain MF133_20135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_20135 PF01584 CheW-like domain MF133_20135 PF01627 Hpt domain MF133_20140 PF01339 CheB methylesterase MF133_20140 PF00072 Response regulator receiver domain MF133_20155 PF13614 AAA domain MF133_20165 PF01584 CheW-like domain MF133_20175 PF00005 ABC transporter MF133_20180 PF03379 CcmB protein MF133_20185 PF01578 Cytochrome C assembly protein MF133_20190 PF04995 Heme exporter protein D (CcmD) MF133_20195 PF03100 CcmE MF133_20200 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MF133_20200 PF01578 Cytochrome C assembly protein MF133_20205 PF08534 Redoxin MF133_20210 PF03918 Cytochrome C biogenesis protein MF133_20220 PF04333 MlaA lipoprotein MF133_20225 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MF133_20225 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MF133_20230 PF00462 Glutaredoxin MF133_20235 PF01029 NusB family MF133_20235 PF01189 16S rRNA methyltransferase RsmB/F MF133_20250 PF01243 Pyridoxamine 5'-phosphate oxidase MF133_20250 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MF133_20255 PF03466 LysR substrate binding domain MF133_20255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_20260 PF01546 Peptidase family M20/M25/M40 MF133_20260 PF07687 Peptidase dimerisation domain MF133_20280 PF13508 Acetyltransferase (GNAT) domain MF133_20295 PF01081 KDPG and KHG aldolase MF133_20300 PF00294 pfkB family carbohydrate kinase MF133_20305 PF10688 Bacterial inner membrane protein MF133_20310 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus MF133_20310 PF08666 SAF domain MF133_20315 PF01232 Mannitol dehydrogenase Rossmann domain MF133_20315 PF08125 Mannitol dehydrogenase C-terminal domain MF133_20320 PF02614 Glucuronate isomerase MF133_20325 PF03480 Bacterial extracellular solute-binding protein, family 7 MF133_20335 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MF133_20340 PF07729 FCD domain MF133_20340 PF00392 Bacterial regulatory proteins, gntR family MF133_20345 PF02899 Phage integrase, N-terminal SAM-like domain MF133_20345 PF00589 Phage integrase family MF133_20390 PF04381 Putative exonuclease, RdgC MF133_20425 PF06630 Enterobacterial exodeoxyribonuclease VIII MF133_20425 PF12684 PDDEXK-like domain of unknown function (DUF3799) MF133_20480 PF03796 DnaB-like helicase C terminal domain MF133_20480 PF00772 DnaB-like helicase N terminal domain MF133_20670 PF03869 Arc-like DNA binding domain MF133_20690 PF01668 SmpB protein MF133_20695 PF03364 Polyketide cyclase / dehydrase and lipid transport MF133_20700 PF03658 RnfH family Ubiquitin MF133_20705 PF13460 NAD(P)H-binding MF133_20710 PF04355 SmpA / OmlA family MF133_20720 PF01381 Helix-turn-helix MF133_20720 PF00717 Peptidase S24-like MF133_20785 PF06114 IrrE N-terminal-like domain MF133_20820 PF08461 Ribonuclease R winged-helix domain MF133_20825 PF11985 Protein of unknown function (DUF3486) MF133_20830 PF03237 Terminase-like family MF133_20835 PF06074 Protein of unknown function (DUF935) MF133_20855 PF10123 Mu-like prophage I protein MF133_20860 PF10124 Mu-like prophage major head subunit gpT MF133_20940 PF01048 Phosphorylase superfamily MF133_20945 PF00849 RNA pseudouridylate synthase MF133_20950 PF01156 Inosine-uridine preferring nucleoside hydrolase MF133_20965 PF07509 Protein of unknown function (DUF1523) MF133_20970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_20970 PF00672 HAMP domain MF133_20975 PF01810 LysE type translocator MF133_20985 PF00999 Sodium/hydrogen exchanger family MF133_20985 PF03471 Transporter associated domain MF133_20985 PF02080 TrkA-C domain MF133_20995 PF02557 D-alanyl-D-alanine carboxypeptidase MF133_21000 PF01546 Peptidase family M20/M25/M40 MF133_21000 PF07687 Peptidase dimerisation domain MF133_21005 PF03960 ArsC family MF133_21015 PF03606 C4-dicarboxylate anaerobic carrier MF133_21020 PF01546 Peptidase family M20/M25/M40 MF133_21020 PF07687 Peptidase dimerisation domain MF133_21035 PF00152 tRNA synthetases class II (D, K and N) MF133_21035 PF01336 OB-fold nucleic acid binding domain MF133_21050 PF00202 Aminotransferase class-III MF133_21055 PF06968 Biotin and Thiamin Synthesis associated domain MF133_21055 PF04055 Radical SAM superfamily MF133_21060 PF00155 Aminotransferase class I and II MF133_21065 PF12697 Alpha/beta hydrolase family MF133_21065 PF08241 Methyltransferase domain MF133_21075 PF01435 Peptidase family M48 MF133_21080 PF00111 2Fe-2S iron-sulfur cluster binding domain MF133_21080 PF03476 MOSC N-terminal beta barrel domain MF133_21080 PF03476 MOSC N-terminal beta barrel domain MF133_21080 PF00111 2Fe-2S iron-sulfur cluster binding domain MF133_21080 PF03473 MOSC domain MF133_21080 PF03473 MOSC domain MF133_21085 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MF133_21085 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF133_21085 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MF133_21090 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MF133_21090 PF10371 Domain of unknown function MF133_21090 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MF133_21090 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MF133_21090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MF133_21095 PF04325 Protein of unknown function (DUF465) MF133_21105 PF01554 MatE MF133_21125 PF00291 Pyridoxal-phosphate dependent enzyme MF133_21130 PF00465 Iron-containing alcohol dehydrogenase MF133_21140 PF08359 YsiA-like protein, C-terminal region MF133_21140 PF00440 Bacterial regulatory proteins, tetR family MF133_21145 PF00171 Aldehyde dehydrogenase family MF133_21155 PF00877 NlpC/P60 family MF133_21160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_21160 PF03466 LysR substrate binding domain MF133_21180 PF08003 Protein of unknown function (DUF1698) MF133_21185 PF13649 Methyltransferase domain MF133_21190 PF01904 Protein of unknown function DUF72 MF133_21195 PF02938 GAD domain MF133_21195 PF00152 tRNA synthetases class II (D, K and N) MF133_21195 PF01336 OB-fold nucleic acid binding domain MF133_21200 PF01709 Transcriptional regulator MF133_21205 PF08019 Phosphoethanolamine transferase EptA/EptB MF133_21205 PF00884 Sulfatase MF133_21215 PF00480 ROK family MF133_21215 PF01047 MarR family MF133_21220 PF01979 Amidohydrolase family MF133_21225 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MF133_21230 PF02378 Phosphotransferase system, EIIC MF133_21230 PF00367 phosphotransferase system, EIIB MF133_21230 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MF133_21235 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain MF133_21235 PF02838 Glycosyl hydrolase family 20, domain 2 MF133_21235 PF03173 Putative carbohydrate binding domain MF133_21235 PF00728 Glycosyl hydrolase family 20, catalytic domain MF133_21245 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MF133_21245 PF00749 tRNA synthetases class I (E and Q), catalytic domain MF133_21250 PF01475 Ferric uptake regulator family MF133_21260 PF00258 Flavodoxin MF133_21265 PF01402 Ribbon-helix-helix protein, copG family MF133_21275 PF12697 Alpha/beta hydrolase family MF133_21280 PF17206 SeqA protein N-terminal domain MF133_21280 PF03925 SeqA protein C-terminal domain MF133_21285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MF133_21285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MF133_21285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MF133_21285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MF133_21295 PF01047 MarR family MF133_21300 PF13406 Transglycosylase SLT domain MF133_21305 PF01066 CDP-alcohol phosphatidyltransferase MF133_21310 PF00005 ABC transporter MF133_21320 PF13416 Bacterial extracellular solute-binding protein MF133_21325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MF133_21325 PF00403 Heavy-metal-associated domain MF133_21325 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF133_21330 PF02627 Carboxymuconolactone decarboxylase family MF133_21350 PF17243 POTRA domain TamA domain 1 MF133_21350 PF07244 Surface antigen variable number repeat MF133_21350 PF01103 Surface antigen MF133_21355 PF04357 TamB, inner membrane protein subunit of TAM complex MF133_21375 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MF133_21380 PF03707 Bacterial signalling protein N terminal repeat MF133_21380 PF00990 Diguanylate cyclase, GGDEF domain MF133_21380 PF00563 EAL domain MF133_21385 PF14718 Soluble lytic murein transglycosylase L domain MF133_21385 PF01464 Transglycosylase SLT domain MF133_21390 PF00356 Bacterial regulatory proteins, lacI family MF133_21400 PF03061 Thioesterase superfamily MF133_21410 PF03372 Endonuclease/Exonuclease/phosphatase family MF133_21415 PF01476 LysM domain MF133_21415 PF01464 Transglycosylase SLT domain MF133_21425 PF16123 Hydroxyacylglutathione hydrolase C-terminus MF133_21425 PF00753 Metallo-beta-lactamase superfamily MF133_21430 PF08241 Methyltransferase domain MF133_21435 PF00075 RNase H MF133_21440 PF00929 Exonuclease MF133_21450 PF11849 Domain of unknown function (DUF3369) MF133_21455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MF133_21455 PF02770 Acyl-CoA dehydrogenase, middle domain MF133_21455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MF133_21455 PF09317 Domain of unknown function (DUF1974) MF133_21460 PF13580 SIS domain MF133_21465 PF13230 Glutamine amidotransferases class-II MF133_21475 PF01933 Uncharacterised protein family UPF0052 MF133_21485 PF09456 RcsC Alpha-Beta-Loop (ABL) MF133_21485 PF00072 Response regulator receiver domain MF133_21485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_21485 PF00512 His Kinase A (phospho-acceptor) domain MF133_21505 PF00196 Bacterial regulatory proteins, luxR family MF133_21505 PF00072 Response regulator receiver domain MF133_21510 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term MF133_21510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF133_21510 PF00672 HAMP domain MF133_21510 PF07730 Histidine kinase MF133_21515 PF06463 Molybdenum Cofactor Synthesis C MF133_21515 PF04055 Radical SAM superfamily MF133_21520 PF12800 4Fe-4S binding domain MF133_21520 PF13187 4Fe-4S dicluster domain MF133_21520 PF00037 4Fe-4S binding domain MF133_21530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MF133_21530 PF00384 Molybdopterin oxidoreductase MF133_21530 PF01568 Molydopterin dinucleotide binding domain MF133_21530 PF10518 TAT (twin-arginine translocation) pathway signal sequence MF133_21535 PF12800 4Fe-4S binding domain MF133_21535 PF12838 4Fe-4S dicluster domain MF133_21540 PF13237 4Fe-4S dicluster domain MF133_21540 PF12801 4Fe-4S binding domain MF133_21545 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) MF133_21550 PF03264 NapC/NirT cytochrome c family, N-terminal region MF133_21555 PF00994 Probable molybdopterin binding domain MF133_21560 PF01967 MoaC family MF133_21565 PF02597 ThiS family MF133_21570 PF02391 MoaE protein MF133_21580 PF00528 Binding-protein-dependent transport system inner membrane component MF133_21585 PF00005 ABC transporter MF133_21585 PF03459 TOBE domain MF133_21590 PF12697 Alpha/beta hydrolase family MF133_21595 PF06406 StbA protein MF133_21605 PF00899 ThiF family MF133_21610 PF00994 Probable molybdopterin binding domain MF133_21610 PF03454 MoeA C-terminal region (domain IV) MF133_21610 PF03453 MoeA N-terminal region (domain I and II) MF133_21615 PF01227 GTP cyclohydrolase I MF133_21625 PF01268 Formate--tetrahydrofolate ligase MF133_21635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_21635 PF03466 LysR substrate binding domain MF133_21640 PF04264 YceI-like domain MF133_21650 PF05221 S-adenosyl-L-homocysteine hydrolase MF133_21650 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain MF133_21665 PF07687 Peptidase dimerisation domain MF133_21665 PF01546 Peptidase family M20/M25/M40 MF133_21670 PF17810 Arginine decarboxylase helical bundle domain MF133_21670 PF17944 Arginine decarboxylase C-terminal helical extension MF133_21670 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MF133_21685 PF03707 Bacterial signalling protein N terminal repeat MF133_21685 PF00990 Diguanylate cyclase, GGDEF domain MF133_21685 PF00563 EAL domain MF133_21690 PF00300 Histidine phosphatase superfamily (branch 1) MF133_21695 PF01844 HNH endonuclease MF133_21710 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MF133_21710 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MF133_21715 PF00849 RNA pseudouridylate synthase MF133_21715 PF01479 S4 domain MF133_21720 PF07690 Major Facilitator Superfamily MF133_21730 PF03466 LysR substrate binding domain MF133_21730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_21740 PF10689 Protein of unknown function (DUF2496) MF133_21750 PF04391 Protein of unknown function (DUF533) MF133_21760 PF00155 Aminotransferase class I and II MF133_21760 PF00392 Bacterial regulatory proteins, gntR family MF133_21765 PF01654 Cytochrome bd terminal oxidase subunit I MF133_21770 PF02322 Cytochrome bd terminal oxidase subunit II MF133_21780 PF07690 Major Facilitator Superfamily MF133_21785 PF00248 Aldo/keto reductase family MF133_21805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_21805 PF03466 LysR substrate binding domain MF133_21810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MF133_21810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MF133_21815 PF00230 Major intrinsic protein MF133_21820 PF07690 Major Facilitator Superfamily MF133_21830 PF16901 C-terminal domain of alpha-glycerophosphate oxidase MF133_21830 PF01266 FAD dependent oxidoreductase MF133_21835 PF03009 Glycerophosphoryl diester phosphodiesterase family MF133_21840 PF00793 DAHP synthetase I family MF133_21845 PF02153 Prephenate dehydrogenase MF133_21845 PF01817 Chorismate mutase type II MF133_21850 PF03466 LysR substrate binding domain MF133_21850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_21855 PF04219 Protein of unknown function, DUF MF133_21860 PF03974 Ecotin MF133_21880 PF00326 Prolyl oligopeptidase family MF133_21880 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MF133_21885 PF07715 TonB-dependent Receptor Plug Domain MF133_21885 PF00593 TonB dependent receptor MF133_21890 PF00884 Sulfatase MF133_21890 PF11893 Domain of unknown function (DUF3413) MF133_21895 PF07208 Protein of unknown function (DUF1414) MF133_21900 PF04245 37-kD nucleoid-associated bacterial protein MF133_21905 PF01547 Bacterial extracellular solute-binding protein MF133_21910 PF14785 Maltose transport system permease protein MalF P2 domain MF133_21910 PF00528 Binding-protein-dependent transport system inner membrane component MF133_21915 PF00528 Binding-protein-dependent transport system inner membrane component MF133_21920 PF08402 TOBE domain MF133_21920 PF00005 ABC transporter MF133_21925 PF03976 Polyphosphate kinase 2 (PPK2) MF133_21930 PF00561 alpha/beta hydrolase fold MF133_21940 PF01594 AI-2E family transporter MF133_21945 PF01206 Sulfurtransferase TusA MF133_21950 PF13181 Tetratricopeptide repeat MF133_21950 PF01435 Peptidase family M48 MF133_21955 PF00578 AhpC/TSA family MF133_21960 PF03960 ArsC family MF133_21975 PF04336 Acyl carrier protein phosphodiesterase MF133_21985 PF00497 Bacterial extracellular solute-binding proteins, family 3 MF133_21990 PF01979 Amidohydrolase family MF133_21995 PF03956 Lysine exporter LysO MF133_22000 PF00005 ABC transporter MF133_22005 PF00497 Bacterial extracellular solute-binding proteins, family 3 MF133_22010 PF00528 Binding-protein-dependent transport system inner membrane component MF133_22015 PF00528 Binding-protein-dependent transport system inner membrane component MF133_22025 PF04055 Radical SAM superfamily MF133_22030 PF00563 EAL domain MF133_22030 PF00990 Diguanylate cyclase, GGDEF domain MF133_22030 PF03707 Bacterial signalling protein N terminal repeat MF133_22035 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF133_22035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MF133_22050 PF00529 HlyD membrane-fusion protein of T1SS MF133_22050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MF133_22055 PF02321 Outer membrane efflux protein MF133_22060 PF01594 AI-2E family transporter MF133_22065 PF00207 Alpha-2-macroglobulin family MF133_22065 PF07703 Alpha-2-macroglobulin bait region domain MF133_22065 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain MF133_22065 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain MF133_22065 PF11974 Bacterial alpha-2-macroglobulin MG3 domain MF133_22065 PF17962 Bacterial macroglobulin domain 6 MF133_22065 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain MF133_22065 PF07678 A-macroglobulin TED domain MF133_22065 PF01835 MG2 domain MF133_22070 PF00905 Penicillin binding protein transpeptidase domain MF133_22070 PF00912 Transglycosylase MF133_22070 PF06832 Penicillin-Binding Protein C-terminus Family MF133_22080 PF02568 Thiamine biosynthesis protein (ThiI) MF133_22080 PF02926 THUMP domain MF133_22090 PF03458 UPF0126 domain MF133_22095 PF00669 Bacterial flagellin N-terminal helical region MF133_22095 PF07196 Flagellin hook IN motif MF133_22095 PF00700 Bacterial flagellin C-terminal helical region MF133_22100 PF00700 Bacterial flagellin C-terminal helical region MF133_22100 PF07196 Flagellin hook IN motif MF133_22100 PF00669 Bacterial flagellin N-terminal helical region MF133_22110 PF07196 Flagellin hook IN motif MF133_22110 PF02465 Flagellar hook-associated protein 2 N-terminus MF133_22110 PF07195 Flagellar hook-associated protein 2 C-terminus MF133_22115 PF02561 Flagellar protein FliS MF133_22140 PF08666 SAF domain MF133_22140 PF03102 NeuB family MF133_22155 PF00202 Aminotransferase class-III MF133_22160 PF02348 Cytidylyltransferase MF133_22170 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MF133_22175 PF02719 Polysaccharide biosynthesis protein MF133_22180 PF01497 Periplasmic binding protein MF133_22190 PF01048 Phosphorylase superfamily MF133_22200 PF02535 ZIP Zinc transporter MF133_22205 PF12729 Four helix bundle sensory module for signal transduction MF133_22205 PF00672 HAMP domain MF133_22205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_22210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MF133_22215 PF00730 HhH-GPD superfamily base excision DNA repair protein MF133_22215 PF10576 Iron-sulfur binding domain of endonuclease III MF133_22215 PF00633 Helix-hairpin-helix motif MF133_22220 PF02508 Rnf-Nqr subunit, membrane protein MF133_22225 PF04205 FMN-binding domain MF133_22230 PF03116 NQR2, RnfD, RnfE family MF133_22235 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MF133_22235 PF12838 4Fe-4S dicluster domain MF133_22235 PF13375 RnfC Barrel sandwich hybrid domain MF133_22235 PF10531 SLBB domain MF133_22240 PF04060 Putative Fe-S cluster MF133_22245 PF02508 Rnf-Nqr subunit, membrane protein MF133_22250 PF00892 EamA-like transporter family MF133_22275 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MF133_22275 PF12241 Trans-2-enoyl-CoA reductase catalytic region MF133_22275 PF07055 Enoyl reductase FAD binding domain MF133_22280 PF03606 C4-dicarboxylate anaerobic carrier MF133_22285 PF00155 Aminotransferase class I and II MF133_22295 PF00462 Glutaredoxin MF133_22300 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family MF133_22305 PF04851 Type III restriction enzyme, res subunit MF133_22305 PF00271 Helicase conserved C-terminal domain MF133_22310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MF133_22310 PF00529 HlyD membrane-fusion protein of T1SS MF133_22315 PF11742 Protein of unknown function (DUF3302) MF133_22320 PF00924 Mechanosensitive ion channel MF133_22320 PF12794 Mechanosensitive ion channel inner membrane domain 1 MF133_22320 PF12795 Mechanosensitive ion channel porin domain MF133_22325 PF02554 Carbon starvation protein CstA MF133_22330 PF00072 Response regulator receiver domain MF133_22330 PF04397 LytTr DNA-binding domain MF133_22335 PF07694 5TMR of 5TMR-LYT MF133_22335 PF06580 Histidine kinase MF133_22340 PF00072 Response regulator receiver domain MF133_22345 PF00465 Iron-containing alcohol dehydrogenase MF133_22345 PF00171 Aldehyde dehydrogenase family MF133_22355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MF133_22360 PF00528 Binding-protein-dependent transport system inner membrane component MF133_22365 PF12911 N-terminal TM domain of oligopeptide transport permease C MF133_22365 PF00528 Binding-protein-dependent transport system inner membrane component MF133_22370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MF133_22370 PF00005 ABC transporter MF133_22375 PF00005 ABC transporter MF133_22375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MF133_22380 PF03741 Integral membrane protein TerC family MF133_22385 PF01168 Alanine racemase, N-terminal domain MF133_22385 PF00842 Alanine racemase, C-terminal domain MF133_22395 PF00375 Sodium:dicarboxylate symporter family MF133_22410 PF01979 Amidohydrolase family MF133_22420 PF00672 HAMP domain MF133_22420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_22425 PF01230 HIT domain MF133_22460 PF02355 Protein export membrane protein MF133_22460 PF13721 SecD export protein N-terminal TM region MF133_22460 PF07549 SecD/SecF GG Motif MF133_22465 PF02355 Protein export membrane protein MF133_22465 PF07549 SecD/SecF GG Motif MF133_22470 PF08447 PAS fold MF133_22470 PF13426 PAS domain MF133_22470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MF133_22480 PF05661 Protein of unknown function (DUF808) MF133_22485 PF01432 Peptidase family M3 MF133_22485 PF08439 Oligopeptidase F MF133_22490 PF08439 Oligopeptidase F MF133_22490 PF01432 Peptidase family M3 MF133_22495 PF05728 Uncharacterised protein family (UPF0227) MF133_22500 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF133_22505 PF01906 Putative heavy-metal-binding MF133_22510 PF00884 Sulfatase MF133_22520 PF00696 Amino acid kinase family MF133_22520 PF01842 ACT domain MF133_22525 PF00696 Amino acid kinase family MF133_22525 PF00583 Acetyltransferase (GNAT) family MF133_22530 PF01625 Peptide methionine sulfoxide reductase MF133_22555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF133_22555 PF03466 LysR substrate binding domain MF133_22560 PF02652 L-lactate permease MF133_22565 PF02754 Cysteine-rich domain MF133_22570 PF13183 4Fe-4S dicluster domain MF133_22570 PF02589 LUD domain MF133_22570 PF11870 Domain of unknown function (DUF3390) MF133_22575 PF02589 LUD domain MF133_22580 PF02913 FAD linked oxidases, C-terminal domain MF133_22580 PF01565 FAD binding domain MF133_22620 PF00005 ABC transporter MF133_22640 PF07690 Major Facilitator Superfamily MF133_22680 PF01593 Flavin containing amine oxidoreductase MF133_22685 PF03239 Iron permease FTR1 family MF133_22730 PF14403 Circularly permuted ATP-grasp type 2 MF133_22730 PF04107 Glutamate-cysteine ligase family 2(GCS2)