        tsaD    6996 ..    7010 + -12.8  -4.89233   CACGACAAAAAGAAA               GGGGCC TGC GGCCCC               TTTTTCATCTTGATG 100 52
        barA   24911 ..   24923 +  -4.7  -4.87665   GCTACCTGGCCCTGA                CCGAC TGA GGCGG                TTTTTCTGACTGGAC  78 18
 JC965_00115 NONE
 JC965_00120   26478 ..   26507 + -22.3   -4.2828   TTCCACTCCTGAAAA       CCACAAGGGACGC CGAA GCGTCCCTTGTGG        TTTTCATACCTGCGA 100 115
        nadB   37238 ..   37263 + -19.1  -2.62184   GTATGCCCTCCCCCA         GATGACCCCGC CCAG GCGGGGTCATC          TGCTATGAGCGGCAG  91 80
        ygfZ   39475 ..   39497 +  -4.6  -3.02511   CGCCTTCTGGTAGCT           GATGCCGAGC TGG GCACGGCCGC           TCTTGAGCAGCTCGG  47 474
 JC965_00200   40974 ..   41014 + -12.6  -2.78816   GGCGCATGACTTATT CCGGGTGCGGGGGGCCGGGT GCT ATTTG-CCCCCCG-GCCCGG TATAGTAGCGGCTGA  74 522
 JC965_00210 NONE
 JC965_00215   43168 ..   43200 + -15.6  -3.55203   CAAGCTGCGCTGATA     CCGGGTGGCCCGTAC AACC GTGTGGGCC-CCCGG      TTTGACCGCCATTTT  91 28
 JC965_00220   44207 ..   44222 +  -5.4  -3.29144   GTTCTGTGGCAGCAA              GCG-CTG GCG CAGGCGC              TTCTCCAGCACCTGG  50 517
 JC965_00270   54840 ..   54863 + -14.6  -5.14563   TGATTTGAGTACACT          GGAAGGCCCC CTTA GGGGCCTTTC           TTTTTTCATCACGGC 100 94
 JC965_00275   55361 ..   55405 +  -7.2  -2.52464   AGATCCGTCGCCGGA TCACCTTCCGGGCAGC-GGCG CTGTGA CGCCAGC-GCCCGGGAG-TGC TAGATTGGCAGCCGG  53 56
        glnE   58343 ..   58366 + -18.2  -2.70932   CTGGGAGAATAAGCA          GAAGGGGCGC CATG GCGCCCCTTC           TCGTTGACGAGAGGC  86 29
 JC965_00300 NONE
 JC965_00305 NONE
 JC965_00310 NONE
 JC965_00315 NONE
 JC965_00320   68268 ..   68289 + -12.9  -6.23545   GGTTTGACCTTTCCA           GGCGCCCCC TCCA GGTGGCGCC            TTTTTTTTGTTTGCA 100 110
 JC965_00325 NONE
 JC965_00330 NONE
 JC965_00335   70766 ..   70789 +  -3.2  -2.78216   CACGGGAGACAGATC          CTCTCGTTCAA ATA TTGAAAG-GAG          TCATTCATGACCATG  41 90
 JC965_00340   71113 ..   71130 +  -4.1  -2.61831   AAAACGAAATTTACA             GCAGG ATCAATCC CCTGC              CATTTTTCGGCTGAA  42 130
 JC965_00345   71692 ..   71711 + -13.6  -4.82901   TGGAACCATGAAAAA            CGGCAACC AGAC GGTTGCCG             TTTTTGTCGGGCCGA 100 48
 JC965_00370   74885 ..   74904 + -13.6  -3.49425   GTGCCCATAAAAAAA            CGGCAACC CTGG GGTTGCCG             TTCTGCCTTCTTGTT  82 77
        argE   82071 ..   82085 +  -4.2  -2.59748   TGTTATTTGACCTTG               CGCAGA CAA TCTGGG               TAGATTGTCCCCCTA  43 116
         ppc   84848 ..   84863 + -11.8  -4.84527   GACCGTTGCAAACAA              GGGCGC CCCG GCGCCC               TTTTTCGTCTCTGCC 100 46
        ybaK   87138 ..   87159 + -15.9  -3.14026   ACTGAACAAACAAAA           GAGGCGCCA TGAC TGGCGCCTC            TTGCGTCTGGATGTC  85 36
 JC965_00435   90664 ..   90680 +  -9.4  -2.78463   TGATAGCGCTGTGTC              GACGGG AATGG CCCGTC              TATACTGGGCACAAT  60 74
 JC965_00440   91603 ..   91614 +  -3.6  -3.34962   GGCATCGCTCCCTGA                CTGG CTCG CCGG                 TTCTCCCCTGTCAGG  48 26
 JC965_00445   92843 ..   92854 +  -5.8  -3.09516   CAGATCCAGGGCGCA                GAGG GCCC CCTC                 TTCCCTGGTCGGCAG  49 452
 JC965_00455 NONE
 JC965_00460   94538 ..   94563 + -19.1   -2.7674   CGCCACCCGATAACA         GAAGAGGCGCC CTGG GGCGCCTCTTC          TCATTGCATCGTGTC  93 44
        metJ   98799 ..   98827 +  -8.8  -3.48924   ACGATGCATCCCTTT        CAATGACGCGGC CCGGT GCCGCGTCATGC        TTATCTGCCACCTCC  66 59
 JC965_00480   99549 ..   99568 +    -7  -3.34398   GCCGGCAAAACGGCT            GCCTGCCG TAAT CGGTCGGC             TCTTTGCCGAAGACA  56 15
 JC965_00485  100013 ..  100045 + -26.5  -3.78775   ACCAGAGAGCAGAAG      CAAGAGAGGCGACCC CCG GGGTCGCCTCTCTTG      TTTGATGCTGACGGC 100 56
        yrfG  104037 ..  104055 + -11.7  -3.33162   GCCTGACACGCACAA             GGCCCTC TTCAC GAGGGCC             TTGTCACATCAGCTC  74 35
 JC965_00515  106236 ..  106257 +  -2.3  -3.61398   CTCACCCCTTCATGA           GTAG-ATCAC CAG GTGGTACTGC           TTCTTGCCCCGGCGC  48 26
 JC965_00525  108459 ..  108474 + -11.8  -2.71364   CCCATAACGACACCA              CCCCGC CGGG GCGGGG               TGGTTCAAACCATGG  70 34
        hslR  120707 ..  120736 +  -6.6   -3.6135   GCCCCTTTATGACGA      CAGGTGG--AGGAA TTAG TTCCTAACCACCTG       TTTAACAATGTGTTT  60 53
        hslO  121674 ..  121690 + -10.8  -3.76952   GTTACACTAATCAAA              GGCGGG CAAAA CCCGCC              TTTAACTTAAATAAC  77 31
        pckA  123472 ..  123496 + -16.5  -5.41143   CGTCTCGCAATCCCG          TACCGGTCAGC CCT GCTGGCCGGTA          TTTTTTTGGCCGATG 100 54
 JC965_00605 NONE
 JC965_00610  126120 ..  126145 + -13.3   -4.0371   CCAGCCTCCTCTGAT         GACACAGGGCC TGCG GGCCCTGTTTC          TTTATCTGCGGCATG  95 27
 JC965_00615  126758 ..  126776 +  -3.8  -2.91274   ATAATTGGTTACACT             TTGCGGGT TTA ATGCGCAA             TCTGGTTGGCGTAAA  44 75
 JC965_00620  127344 ..  127361 + -11.3  -4.64766   AACTGCCATAAAAAA             GGTGAGC CCGG GCTCACC              TTTTTGCGCTCTGCA  95 59
 JC965_00630 NONE
 JC965_00635  130507 ..  130527 + -18.3  -5.37345   GCCGCACGACAAAAA            GCCCGGGTC ATT GACCCGGGC            TTTTTTATGCTTCGC 100 50
 JC965_00645  133669 ..  133681 +  -3.3  -2.62616   GACGGATCCCATGGT                CGAGG AGG CCTCC                TGATGTCCACCCTGC  40 10
        exeB  134417 ..  134436 +  -4.9   -4.7497   TCAGCGCCCATTCTG            AGGGAGC CCGAGA GCTCCCC             TTTTTCATCAATAAC  74 75
        mutY NONE
 JC965_00660  135977 ..  135995 + -13.1  -2.76583   CAGGCCAGTCAGTGA             CGGGCGG CCCCA CCGCCCG             GTTTGAGGATCTTAT  74 113
        mltC  137120 ..  137150 +  -9.6  -3.83998   CTGGCTGATGGCATG       CAAGAAGGGCGCTC CTG GAGCGCCCTTCCCA       TTTACTGTGGCCTGA  75 33
 JC965_00675  138810 ..  138830 + -19.7  -3.01712   GAGGCCATCCTGCCA            GGGCCGGCG CTT CGCCGGCCC            TCTTGCCGACAAGGG 100 43
        ompA  140120 ..  140143 + -12.4  -5.71983   GACGACCCCAAACAA          AACGGGAGGC CATG GCCTCCCGTC           TTTTTTTATGCTTCC 100 42
         hfq  144165 ..  144182 + -11.3  -2.82895   ATCAGGGTGGCAGCA             GCGAGCA GTAA TGCTCGC              CTTCTTCCTCCGCCG  69 15
        rsmC  149043 ..  149058 + -10.4  -5.40072   CAAGAAAACGTTCAC              CACCCC TTTA GGGGTG               TTTTTTTCGCAGCAA 100 101
        glgC NONE
        glgA  151803 ..  151819 +  -4.3  -2.94924   CCGATTGCTGAAGTT              TTGTGCC CTT GGCACGC              CTTTATCCGTCAACA  46 43
 JC965_00735 NONE
 JC965_00740 NONE
 JC965_00745 NONE
 JC965_00750  152418 ..  152432 +  -4.2  -3.53224   GTAAAACACAGAAAA               TGCGCT CCA ACCGCA               TTTAAAAACCAGCTG  52 53
 JC965_00755  152560 ..  152583 + -16.8  -4.91977   CCATTATTCTGCAAA          GGCCCGTTAC GAGA GTAACGGGCC           TTTTGTGTTTTCATG 100 38
 JC965_00760  153151 ..  153165 +  -5.8  -3.55084   TCCGAAAAAGATTAA               TGATAA CTA TTATCA               TCTTTGGTGTTGCCA  58 256
        nhaC  154858 ..  154874 + -10.8  -4.03234   AAAAACAACGACAAA              GGCGCC ATCAC GGCGCC              TTTGTCTGGGCGCGA  81 48
 JC965_00785 NONE
 JC965_00790 NONE
 JC965_00795 NONE
 JC965_00800  161561 ..  161586 + -17.7  -4.19258   CCGTCCCCCTGAAAA         CAAGATGGCCC CTTG GGGCCATCTTG          TTTTGCATCAGGTCT 100 49
 JC965_00825  165485 ..  165525 +  -3.8  -3.01712   ATTGATGAGGGGGAT CCCCTGCCAGGG-CATGGC CTGG GTCGTGGCCCCGCCGGGCG  TCTTGAGCAGGGGCC  45 445
 JC965_00860  172345 ..  172369 +  -6.5  -2.80035   GCACCGCTCTATTAC         GAAGT-GGCG TAAAAC CGCCGACTTC          TCGTCTTCATCTCTC  51 14
         bfr  172997 ..  173010 +  -9.5  -5.14563   AAGAGACAATCCCAA               CCCGC CCTG GCGGG                TTTTTTCATGGCACC 100 55
 JC965_00870  173695 ..  173717 + -10.6  -4.93877   ACGCCAGACAGCAAA           GAGCCGGA ACAGATG TCCGGCTC           TTTTCTTTCATGGGG 100 44
 JC965_00880  175733 ..  175753 + -15.5  -3.25942   TGGCGCAACAAGAAA            GGGCAGGAT CCC ATCCTGCCC            TTCATCTCACGGGGT  87 58
        treR  179344 ..  179354 +  -4.6  -4.82901   TTTCCTCCATTCCCG                 GCGT TTT GCGC                 TTTTTGTGACCAGCG  74 48
        treB  180951 ..  180972 + -11.5   -4.0616   TGATCCACACAACCT           CGGCGGAGC CCTG GCTCCGCCC            TTTATCGTTGCCCTG  86 38
        treC NONE
 JC965_00915  183319 ..  183339 +   -14  -3.34609   CTGGCTGACACAGAA            GGGGCAGG CCGTA CCTGCCCC            TGTTCCTTTCCCTGA  83 33
 JC965_00925  185121 ..  185140 +  -5.6  -3.14132   CGCCGGGCTGGGCGC            TCTGGCGG CTCC CTGCCAGC             TTCATCAGGGCCGCC  51 317
 JC965_00935  187153 ..  187183 + -22.7  -2.73364   CAGGCGAGAGATCAA       CGACAAGGGCGCC ATCAA GGCGCCCTTGTCG       TCGTTGCCGTCGGCA 100 87
 JC965_00955  191396 ..  191418 + -17.8   -4.1891   TCAGGACAAAAAATC           GAGGGAGGCA TGA TGCCTCCCTC           TTTCTATTGCAAGCC 100 123
 JC965_00965 NONE
 JC965_00970  195685 ..  195716 +  -2.1  -4.35483   ATGTGAAACTGGTTG      TAGCGGATCGCCT TCACAT AGGCCAGCCGCAG       TTTCTTCTCGTCGAC  62 285
        znuC NONE
        znuB  198865 ..  198881 +  -7.9  -4.09243   CCCAGCCCGTTCAGA              CGCGCCT GAG AGGCTCG              TTTTCCCCGGGTCTC  71 136
 JC965_01000  200777 ..  200795 +  -8.8  -3.71848   CAGATGGGGGATCAC             CCCCTGCT CGA ACCAGGGG             TTCTTCCTGAGCCAG  69 76
        rarD NONE
 JC965_01015  202762 ..  202772 +  -2.4  -2.52516   AGCACCACCAGCAAC                 CAGG GCG CCAG                 CTTGATGATGAGGGC  37 146
 JC965_01040 NONE
 JC965_01045 NONE
 JC965_01050 NONE
 JC965_01055  208709 ..  208732 + -16.8  -4.72272   TGCCAGAGATGCAAA          GAGCCCGGTA TCGC TACCGGGCTC           TTTTTCATCAGAGGG 100 50
 JC965_01065 NONE
 JC965_01070 NONE
 JC965_01075 NONE
 JC965_01080  212011 ..  212034 + -18.2  -2.84801   CCCTTCACCCTGTTC          CAACGCCCGG CTTG CCGGGCGTTG           TCATCTTTGCAGCTC  88 53
 JC965_01090  212895 ..  212909 +  -4.2  -2.57863   ATTCCCGCCTGATGA               GAAGCA ATA TGCTGC               CTTCATCGGTTTTTT  43 29
 JC965_01095  213449 ..  213465 +  -9.4  -4.67353   GCCCATCACAAGAAA              GGAGCC TTGCC GGCTCC              TTTTTCACTGACTCG  83 60
 JC965_01115  215115 ..  215131 +  -2.3  -3.75884   CCTGTTCAAGATATA              AAAAAAC AGG GTTTTTA              TTAATTTGTTTCACC  51 49
 JC965_01120 NONE
 JC965_01125 NONE
        folA  217121 ..  217142 +  -9.3  -5.26918   CTGATGCCATGAAGA           GCCCCTTGC GACA GCCGGGGGC            TTTTTTGTGCCCTGT  95 46
        proV NONE
        proW NONE
        proX  220951 ..  220970 + -16.4  -5.60993   CTGCGCAAAGAAAAA            CGCCCGGC AGTT GCCGGGCG             TTTTTTTGTGGGCGG 100 63
 JC965_01165  226354 ..  226373 + -16.4  -4.42238   TTCTGCATAAAAAAA            CGCCCCGC AATT GCGGGGCG             TTTTGATTGCCATGG 100 60
        ansA  234261 ..  234285 + -20.1  -4.14598   ATAGAGAGGAAAAAA          GAGGGGAGCCA TAA TGGCTCCCCTC          TTTCGTTTCGTTACC 100 212
 JC965_01205 NONE
 JC965_01210  237707 ..  237720 +  -9.5  -5.65177   TGCCCCATAAAAAAA               CCGCC TGTC GGCGG                TTTTTTTATGGCTGT 100 51
 JC965_01220  241967 ..  241983 + -12.3  -4.76075   TCGTATCCTGACAAA              CCCCTGA ACC TCAGGGG              TTTTCTTCATCTGGT 100 54
 JC965_01225  242612 ..  242629 + -11.3  -5.86976   CGCAGAACGCCAAAA             GCCCTGA TTAT TCAGGGC              TTTTTTGTTTTCTGA 100 43
 JC965_01230  244644 ..  244655 +  -5.8  -3.23692   GACGATCTGCTGCAG                CAGC GCCA GCTG                 TTCATCCTCCTCGTC  51 457
 JC965_01250  248722 ..  248739 +  -5.5  -3.33696   GGCATGGGGGCCGAG             CACCAGC ACCA GCTGATG              TTCGTTGAGCACGAC  52 137
 JC965_01310  261793 ..  261816 + -15.4  -5.02476   CTTCAGGTTGAAGAC          CAATGCCACC CTCG GGTGGCATTG           TTTTTTGCAGCGTCT 100 51
 JC965_01315  262387 ..  262400 +  -3.7  -4.25104   CTAGCGCCAGCCCCC               GGGGC CCGC GCCCA                TTTTCATCCACGCCG  63 123
        nrdR  262907 ..  262930 +  -8.8  -2.57344   TATGTGAATAAGAGA          GGGC-CTGCCG TTG CGGCAGCGCCA          GTTGTCACACCAGTG  59 59
        ribD NONE
 JC965_01330 NONE
 JC965_01335  266242 ..  266266 + -17.2  -5.24531   CGGTTGAATTCATCA          CCATGGCCGC CCGTT GCGGCCATGG          TTTTTTGTCGCGGCT 100 51
        ribE NONE
        nusB  267279 ..  267295 +  -9.4  -4.84527   GCAATTAAGAGAGGA              GCCAGC TTATT GCTGGC              TTTTTACTGTATGGG  86 56
        thiL NONE
 JC965_01355  268827 ..  268848 + -11.5  -5.71712   CGGATATACCGCACA           CGCATGCCC TGAG GGGCCTGCG            TTTTTTTGTATGCAA 100 102
 JC965_01360  271128 ..  271139 +  -7.2   -4.1399   CAAGCTAGGAAAGCA                CCGG TTCG CCGG                 TTTGTCTGTCAATAA  71 33
 JC965_01365  272761 ..  272771 +  -2.4  -2.71011   TAAGGAAGGACCCGG                 CGGG GCA CCCA                 TGGTTGCCCCGCCAT  38 51
 JC965_01370 NONE
 JC965_01375  274929 ..  274946 + -14.1   -5.5604   GTGAATAACAAAAAA             GGGCGCC ATCA GGCGCCC              TTTTTTATTGCTTGC 100 203
        pomA NONE
 JC965_01400  279985 ..  280012 + -11.2  -3.89695   CCATCCGAACCGACA        GCTGCGGCTCTC TTTT GATTGCCGCAGC         TTCTCTTTATAAAGC  83 112
        greA  280541 ..  280561 + -16.9  -3.86252   CGTCGGGGAAAGAGA            CAGGGGAGC CGG GCTCCCCTG            TTGTCTTTAGTCACC 100 46
        rlmE NONE
        ftsH  284305 ..  284322 + -14.1  -5.27335   TTGCCATGATACAAA             CCCCGGG CTTG CCCGGGG              TTTTTCTTTGCACGA 100 42
        folP NONE
        glmM  286576 ..  286607 + -13.8  -3.26444   CGGCGTTTTAATGAA      CAAACAAGGCGGCT TTTT AGTCGCCTTGGTTG       TATCTTGTTCAAACG  81 30
 JC965_01440 NONE
        secG NONE
 JC965_01450  287900 ..  287913 +  -9.5   -2.5294   CAATTAAGCAGTGAA               CCCGG GTAA CCGGG                ATGTTATAGCCACTG  62 39
 JC965_01455  288122 ..  288142 + -12.6  -5.24796   AGGGTAAAGCGCCAA            GCCCCGAT TTGAC ATCGGGGC            TTTTTGTTATGTGCA 100 93
        rimP NONE
        nusA NONE
        infB  292940 ..  292955 + -11.8   -4.3739   GAGTTAGACAAAATA              GGGGGC CGCG GCCCCC               TTTTATCGCAGGATA  91 46
        rbfA  293410 ..  293426 +  -7.3  -2.71924   GAGGATAACGCCTGA              GATGTCT CGT AGACGTC              GTTTCAAAGGCCGTG  53 26
        truB  294409 ..  294434 +  -4.5  -2.91144   TCCCGTTGCGAAAAG         GGGCGGGGACG ATTA TGATACCGCCC          TCATTTCACGGCTGA  46 73
        rpsO  294791 ..  294810 + -13.6  -5.45652   AGATTTCGCAAAAAA            GGGGAACC GCGA GGTTCCCC             TTTTTTATTGCCCGT 100 50
         pnp  297105 ..  297122 + -12.7  -5.29782   GCCGTATGTGAAAGA             GCCGACC CTTG GGTCGGC              TTTTTTGTGCCTGTC 100 45
 JC965_01495  298682 ..  298695 +  -2.3  -3.72678   CCGACATCAGGAAGA               GGTTG AGGT CTACC                TTTCCCTCCTCTTTG  52 268
 JC965_01505  299366 ..  299397 + -20.4  -3.93695   GGAAGGGCAGCGCAA      TAGAAAAAGCCGGG CATG CCCGGCTTTTTCTA       TTTCTGGATAATGCA 100 42
 JC965_01520  302555 ..  302586 + -23.2  -4.17296   GCAAGTGCAGTTAAA      CAACAACGGCGACC ATCA GGTCGCCGTTGTTG       TTTCTGTGTATCCGG 100 47
        xerD  308220 ..  308233 +  -9.5  -5.75342   CCTTGCAACAAAAAA               CCGCC CGAA GGCGG                TTTTTTTTCAGCACA 100 53
 JC965_01555 NONE
        recJ  311377 ..  311396 +   -15  -5.70829   TCTTGCTGTCGATGA            CGGCCACC TCAG GGTGGCCG             TTTTTTTATGGTGTT 100 54
 JC965_01565  312662 ..  312675 +  -8.1  -2.80113   TGGCTATGTGATCTG               CTGCC TGCA GGCAG                TCTGATCAGGTCATC  57 7
 JC965_01570  313292 ..  313314 +  -8.4  -3.23492   CCGGTTTTAGGGAAT           GGGGCGGTGT TTA ATATCGCTCC           TGTTAATATCTCATG  62 93
 JC965_01575  313835 ..  313848 +  -9.5  -3.73953   ACTAGGTTCACCAGC               CGGGC GCCT GCCCG                TTTGATCCCCGTCAT  75 36
        nqrE  315026 ..  315036 +  -3.2  -3.14564   GGGCGTCAGGCAGCG                 CCAT CCC GTGG                 TTGCTGGCAAGATCC  44 436
 JC965_01660  330690 ..  330719 + -15.1  -4.21989   CATAAGCCAAACCAT       AAAAAGAGGCGCC CAAG GGCGCCTCTTTTG        TTTATTGGCGTTGTG 100 61
 JC965_01690  337847 ..  337884 +  -3.5  -5.36441   ACTGCCAGGTGCCAA   TCGGGTGGCA-TATCA ATCCGTG TGATGGTGCCAGCCGG   TTTTTTATATGGCCG  86 54
 JC965_01695  338936 ..  338978 +  -3.9  -3.11118   GTCCGGCCCTGCCAC CTGGGTGGGGACGGCCAGG ACCAG TCTGTCCGTCAGCAACCTG TGTTCCCTCAGTTGT  47 428
 JC965_01705 NONE
 JC965_01710  340496 ..  340552 +    -5  -3.50853   CAGGTGCCGCAAGAT TGCCCGACGCTGGG-GGAAGCCTGCTC GGCC GAGTAGCGTTCCACCCGGTTGCGGCCA TTGTGCTTGGCCAGA  54 63
 JC965_01725  344524 ..  344554 +  -5.5  -6.19443   TTGGGCCTAGAAAAG      GGTCATGACGGGGA TGAT TTCTCGT-GTGACC       TTTTTTTTTGATGTG 100 66
 JC965_01745 NONE
 JC965_01750 NONE
 JC965_01755 NONE
 JC965_01760  350774 ..  350789 + -10.4  -5.44119   CCAGCCAATAAAAAA              GCGAGC CTGG GCTCGC               TTTTTTTGCAATCAC 100 75
 JC965_01780  354658 ..  354674 + -15.1   -4.7373   TGCAGCCATGAAAAA              CGGGGGC CTG GCCCCCG              TTTTTCATGGCGTGC 100 46
 JC965_01820  362030 ..  362040 +  -4.6   -2.5893   CGGTGTTCACCAAAC                 CCTG AGC CGGG                 CGTTTTCATTTGGCC  43 21
 JC965_01825  363476 ..  363513 +  -4.8  -3.72324   GCCAGCAGCAGATCG   CTGGTCTGGGCGGCG TCCAGCTCC CGCAGCC-AGCCCAG   TTGTTGCTGGCGCTG  58 172
 JC965_01835  364880 ..  364896 + -10.8  -4.32177   ATGGTCATAAAAAAA              CCGGGC ACTGG GCCCGG              TTTGTTATGCAGTCA  86 132
 JC965_01870  371676 ..  371697 +  -7.3  -3.62522   ACGGGAGGCCAACAC           GTCCTTGAT CTCA GTCAGGGAC            TTCTTACCGAGGTTA  62 476
 JC965_02015  386075 ..  386096 + -14.5   -2.9462   CCCCTGACAGACAAA           GGGCGTATC CCTC GATACGCCC            TGCTTTCAATCCATC  80 34
        greB  388961 ..  388984 +  -3.6  -2.90763   TGCGGCGCCAACCGG          CCCGCGCGGC AGTG GCCTGGCAGG           TATCTAAAGTATCGC  44 182
 JC965_02035  391399 ..  391412 +  -9.5   -4.7497   CCAGAATGCAAAAAA               GCCCC GAAA GGGGC                TTTTTCATGCCTGCA  91 45
 JC965_02055  394128 ..  394140 +  -4.7   -3.4252   GCACGCTACCCAAGC                CCCGC CAA GCGAG                TTATCATGAATACCC  52 115
        nfuA  394790 ..  394811 + -18.7   -4.3208   TTGCGGCAAAGAAAA           GGCCCCGCC AGCT GGCGGGGCC            TTTTGCATTCTGCGG 100 50
        gpmM NONE
 JC965_02085  400202 ..  400218 +  -5.8   -4.8622   TTCACCCGACAAAAA              GTCTGC ATCGC GCAGGC              TTTTTGCTTGCCAGG  82 145
 JC965_02095  402041 ..  402075 + -14.5  -2.60763   CCTCGGCTGATCCCC    G-GCCATCATGGCGCGT TCG AC-CGCCATGATGGCGC    CTTCTCCCCTCTCCC  78 31
 JC965_02100 NONE
 JC965_02125  407970 ..  408004 + -17.2   -3.0264   CATCCTCTGACGGAA     ACACATCGGGGCCG CATCCGT CGGCCCCGATGTGA     TATTGCACCGACTTT  89 31
        pssA  409493 ..  409514 + -17.3   -4.7497   CCCCGTCAGTGAAAA           GGCCTGCCG TTTC CGGCAGGCC            TTTTTCATGGATGAC 100 52
        recG NONE
 JC965_02140  414032 ..  414054 + -13.5  -3.26471   CCGCCCAATAACGAA           CAAGGCCTC GCGAA GAGGCCTTG           TTGCTGTGAACATCA  81 30
 JC965_02150  415957 ..  415975 +    -8  -3.64703   AGCCTGACCTTCATG             TCGGCGGC GAA GCGGCCGG             TTTCGGTCGGCACGC  62 146
        glnA  421107 ..  421122 + -11.8  -5.98781   CTTTCCCATGACAAA              CCCGCC ATCT GGCGGG               TTTTTTTTCATTCTG 100 45
 JC965_02175  421884 ..  421900 +  -7.3  -3.39327   TGCGGGTAAACTTGA              TGCACTA TAT TGGTGCA              TTCTAGGTGTACAGC  61 60
        glnL NONE
        glnG  424473 ..  424498 + -11.9  -3.90048   AAGCCTGACCAATCA         CACCCCGTTTG CTTG CAAACGGGGTA          TCTTTTTCAGGCGCC  85 79
         add  425587 ..  425600 +  -9.5  -5.55769   AAACCCAATAAAAAA               CCGCC GAAA GGCGG                TTTTTTATTGTCCAA 100 50
 JC965_02215  430738 ..  430761 + -12.4  -2.73875   TGCTCATAAAAAAAC          GCCCCGACGA TGAC TCATCGGGGC           TGCTATTCAGCCACA  71 483
         def NONE
         fmt  438912 ..  438930 +  -8.1  -3.39505   ATTGAATTGACACAA            G-CGGGGC CCTG GCCCCGAC             TTGTGCATCTAAGGT  64 46
        rsmB  440260 ..  440282 + -12.7  -2.70932   GCCGAACCGGCGGAT          GGCAGGCCCG GTGA CGGGCC-GCC           TCATTACGAAGCAAC  73 41
        trkA  441725 ..  441758 + -12.5  -5.08824   TGGCAACGGTATCCG     GACCCGGCCCCTTTTC TCA GGAAAGGT-CCGGGTC     TTTTTTCAATCAACG 100 55
 JC965_02275  443258 ..  443288 + -24.2  -3.28924   GGCTGTTGCATGAAA       CGAAAAGGGCAGCC AAT GGCTGCCCTTTTCG       TTGTCCCGGCGAATG 100 52
 JC965_02290  445521 ..  445544 + -18.2  -2.72344   GACCGCTGGCAATGA          CAGAGGGGCC CGCA GGCCCCTCTG           TCATTCACCGTGGCA  86 39
 JC965_02325  452747 ..  452767 + -12.5  -2.57132   GATCTCGGCCAACAC            GCCCGCCAG CTT CTGACGGGC            CTTCTCCCGGAACAG  73 10
 JC965_02330  454540 ..  454555 + -10.4  -4.27774   TTATCAACAAAGCAG              GGGGGA GAAA TCCCCC               TTTCTCATTTTTACT  86 56
 JC965_02335  454792 ..  454820 +  -5.9  -3.06162   TGGAGAAGATCCGCC        GCGGGGGCGGT CGCTGAA GTCGCTCCTGC        TGTTAAAATCCCGTC  52 9
        rarD NONE
 JC965_02345  456746 ..  456766 +  -2.6  -3.94773   TGCCCCATGCTGTCA           CCTCC-ATA CCGC TGTCGGAGG            TCTTTTATGTTCACC  54 84
 JC965_02350  457636 ..  457646 +  -8.2  -3.08869   ATCGGTGGCGCAATG                 CCCG ACC CGGG                 TCTGTCCTTTGTACT  57 250
 JC965_02360 NONE
 JC965_02365  459577 ..  459594 + -12.7  -3.97947   GCCGAAAACGACAAA             GCCTGCC AGGG GGCAGGC              TTTGTCGTCGCTGAA  89 46
        ydfZ  460640 ..  460668 + -13.2  -4.13246   ACTCTTTACAATTCA       CCCGGCC-GC-ACG CCC CGTCGCTGGCCGGG       TTTCTCTCTCCGCTA  91 60
 JC965_02390  463668 ..  463699 +   -15  -4.44245   AGCCGGTGCGTGCCA      TCTGGCGGCGGGGC CCGG GCCCTGCCGCCTGC       TTTTATGCCTGCTAT 100 40
 JC965_02395  465234 ..  465255 + -12.3  -3.12327   CGAAACCAATATTAA           TGGCCGTGG ATGA TCACGGCCA            TATTGAATATCCACA  74 426
 JC965_02420  472086 ..  472103 + -14.1  -4.85129   GACTCTCAATCCAGA             CCGGCCC GCAC GGGCCGG              TTTTTAGTCTCTACT 100 67
 JC965_02425  473798 ..  473814 +  -4.3  -3.19091   TCAAGGAGGCCCATT              CATGAGC CAA GCACGTG              TTCCTGCCTGGATAT  47 104
 JC965_02430 NONE
 JC965_02435  475905 ..  475932 + -14.2  -4.56597   GCCCTTCATGCCATG        CAAAAGGCCCGC ACAT GCGGGCCTTTTC         TTTTTCGGGCGACGG 100 45
 JC965_02445  478135 ..  478147 +  -2.6  -3.09015   ATCGATGCATGGGCG                GGGC AAGGA GTCC                TTACATGAATCTGGA  42 60
        fghA  479057 ..  479072 +  -3.2  -3.03159   TTCACCCGGAAACAG              GAGACA AGGA TGCCTC               TCTTCACCACATTGC  42 82
 JC965_02455  479607 ..  479620 +  -9.5  -4.99435   GCATCCTGCAAAAAA               GGCCC CGAG GGGCC                TTTTTCATTGTTGCG 100 60
        ovoA  482831 ..  482853 + -19.2  -4.06419   ACGCGGCAAACGAAA           GAGGGAGGCC CAT GGCCTCCCTC           TTCTTTATCCGGACC 100 43
 JC965_02545 NONE
 JC965_02550  505486 ..  505505 +  -6.3  -3.76641   CGCTCAACCCGCCCA            GGCGTGC TAAGCT GCCCGCC             TTTCCGTGTTCACCT  61 16
 JC965_02555  505963 ..  505982 +   -15  -4.51378   GACATAACAACAAAA            CGGGCAGC CCAG GCTGCCCG             TTTTCTCATCTCGCT 100 46
 JC965_02570 NONE
 JC965_02575 NONE
 JC965_02580  509943 ..  509964 + -15.9  -3.93817   CGGGGCAGATAGCAA           CAGAGCGCC ATCA GGCGCTCTG            TCTTTTTGCGGTATC 100 46
 JC965_02590 NONE
 JC965_02595  513352 ..  513366 +  -2.7  -3.71527   CATGGTGGGGGAGAG               CCCAC GACAG GCGGG               TTTGAGTGCTTGCGG  52 112
 JC965_02615  517326 ..  517348 +  -4.8  -5.00616   CTTTGCCGCCCCTCT           CCCATTGGTT TAC AATCGACGGG           TTTTTTGGAACCGGG  78 101
        ettA  519156 ..  519173 + -12.7  -5.17054   GGTATGACGTCACAA             GGGGAGC CGGG GCTCCCC              TTTTTTGCCTCTTCT 100 65
 JC965_02625  519573 ..  519590 +  -4.7  -5.03314   TCCCGATGTGGAAAC             GGGGCTC TATT GGTCCCC              TTTTTTCGGCCTCCG  81 41
 JC965_02630  521212 ..  521230 + -14.6  -5.60993   CTCTGAAAACAAAAA             TGCCCGTC ATC GACGGGCA             TTTTTTTATGGCGGG 100 69
        lptD NONE
        surA NONE
        pdxA NONE
        rsmA NONE
        apaG NONE
 JC965_02675  530831 ..  530853 +   -22   -5.1861   GAGCTGAAAACAGAA           CGGGCCCGGC AAT GCCGGGCCCG           TTTTTTCATGATGAG 100 110
 JC965_02690  535664 ..  535683 + -12.2  -4.87893   TCGCCCATAAAAAAA            CGGTCAAC CCGG GTTGACCG             TTTTTCGTTCCACTT 100 55
        ispB  540668 ..  540682 + -11.4  -5.60689   ACATGCATGAAAAAA               GAGGCC TTC GGCCTC               TTTTTTATTGTCTGC 100 48
        queG NONE
 JC965_02775  553473 ..  553492 +   -15  -2.94218   CCAGCAACATCAGAA            GACCCGGC CCGT GCCGGGTC             TCTCTCATCCGGGCT  82 44
        metN NONE
 JC965_02790 NONE
        metQ  556959 ..  556977 + -12.4  -6.06723   TCACTCTGGAAAAAA             GGCCACGT CAA GCGTGGCC             TTTTTTTTTACCCCC 100 45
        rfaH  557662 ..  557687 + -20.5  -5.00642   TCGGGCCGAAAAAAA         CGGGGCAGACC CAGA GGTCTGCCCCG          TTTTTCTCTCACTTG 100 150
 JC965_02835  570774 ..  570796 + -19.2  -3.51232   CCCGCCCCAAGCAAG           GAGGCCACCC CCG GGGTGGCCTC           TTCATTTGCACAACC 100 41
 JC965_02860  574476 ..  574496 + -16.1  -4.51378   ACAACCCAATGAAAA            CGGGCCCCG CCA TGGGGCCCG            TTTTGTCATCTGCGT 100 50
 JC965_02880  578562 ..  578573 +  -7.2  -3.85698   CGTCAATCACAAGTA                CGCC TGAC GGCG                 TTTATCCGAGGAGAC  67 19
         bcp  579075 ..  579100 + -12.5  -2.90496   GCCAGCGGCATTGTT         GCAGGGCTCAC CATG GCGGGCCCTGC          TCGTTTCACCACGGC  75 44
 JC965_02890  579763 ..  579778 + -11.8  -3.98661   CCTGAATGTGAAAAA              GGCGCC TGAG GGCGCC               TTTGTCGTCAGTCTG  85 36
 JC965_02900  581766 ..  581783 + -14.1  -4.30576   TTAGCTGTAGAGCAA             GGCCGCC CCAG GGCGGCC              TTTTCCTGATCCCAA 100 42
         pta  584002 ..  584017 + -11.8  -5.64274   CGATGCAATGAAAAA              CCCGCC GAGA GGCGGG               TTTTTTTATGGCTCG 100 54
        leuA NONE
        leuB NONE
        leuC  594176 ..  594191 +  -5.4  -3.29461   CGTCACCGGCCGCTT              CGC-CGA CAT TCGCGCG              TTGTAAGAGGGGTTG  52 4
        leuD  594929 ..  594948 + -13.6  -4.78237   AGCGAGTAGAATCAA            CAGGGAGC CAAG GCTCCCTG             TTTTATTGTCGGGTC 100 58
 JC965_02960  595943 ..  595964 +  -6.6  -2.87132   AGGGGAAATGAGACA           GGCCA-CCA GCCCA TGGCTGGCC           TGTCTCGAGGAGGAC  51 30
 JC965_02970 NONE
        thiP NONE
        thiQ NONE
 JC965_02985  600182 ..  600203 + -15.9  -3.96148   GGCGGGATCAAAAAA           GGGGAAGCC GTCC GGCTTCCCC            TTTCTCATGCAGAGA 100 45
         rrf NONE
 JC965_03020  605919 ..  605940 + -15.9  -5.04601   GCCACTAAATTGAAA           GGCCTTCCC TATC GGGAAGGCC            TTTTTGCTTTCTGAC 100 37
 JC965_03050  613188 ..  613210 +    -9  -3.50722   GTTGACCCTCCCCCT           GGGCCAAGGG TTA CCATAGGCCC           TCTTTCGTCATTGAG  66 57
 JC965_03055  613548 ..  613562 +  -3.4  -3.84451   CGTCCGCCCCGTCAC               CACGGC TGA GTCGAG               TTTCCCTTTCCGGGC  53 17
 JC965_03060  614115 ..  614140 + -20.5  -4.78764   TACGGTCAGGGAGGA         GGGCCGCCATC GCGA GATGGCGGCCC          TTTTTCGTCGATTTG 100 107
 JC965_03065  616523 ..  616549 + -15.1  -4.74706   CAGCTTGTTACCAAA         CCCCGTTCCGG CAGCC CCGGATCGGGG         TTTTTGCATCTTGGC 100 61
 JC965_03070  618034 ..  618062 + -21.1  -3.10958   TTCGGATGTGCCCCG        GACTCGCTCCTCC TTC GGGGGAGCGAGTC        TCATTTATTGCAGTA 100 53
 JC965_03075  620677 ..  620694 + -14.1  -5.31275   TCACCCAATAAAAAA             CGGCGCC TTCG GGCGCCG              TTTTTTATGCTGGAC 100 44
 JC965_03085  621726 ..  621741 + -11.8  -4.40237   GGCAGCCATGAAAAA              CGGGCC TTCT GGCCCG               TTTTGCTATGTGATC  91 47
 JC965_03100 NONE
 JC965_03105  626396 ..  626407 +  -5.8  -2.74012   AGGCCAGGCTGATGG                GCAG AGTG CTGC                 TGCTTGAACTGCTGG  46 496
 JC965_03115  627696 ..  627723 +  -2.6  -4.52143   GCCAGCGGCGAGCGC        GGTGG-GGCGCTC GCC GAATCCCGCCACC        TTTGTTATATTTCGC  65 43
 JC965_03120  628408 ..  628426 + -12.4  -5.76949   GATGTCAACGTGAAA             CGGGGCTT CTT GAGCCCCG             TTTTTTTTGCGCGTC 100 54
        tatA NONE
 JC965_03135  630201 ..  630218 + -12.7   -3.1978   GAGATCGTGATGACA             CGGCAGG CTTG CCTGCCG              TCTTGCTCTGCCCCT  75 39
 JC965_03140  631926 ..  631941 +  -3.9  -3.06796   GCATCAACAGCCTGG              CCGGG GTGGGA TCCGG               TTGGCTGGCATGAGG  45 126
 JC965_03150  633751 ..  633768 + -12.7  -4.23054   TTGCCCAATCAAAAA             GACCGCC TGCT GGCGGTC              TTTTGCGTGATGTCT  93 455
        fabR NONE
 JC965_03165  636112 ..  636124 +  -9.1  -3.73088   CTAGTCGGCCCTGGG                GGGAG TCT CTCCC                TTCTTCCTGGCGTCT  71 74
        ftsY  639087 ..  639104 + -12.7  -2.93382   AGCACGTGTTCCATA             CCCCGAC TCCG GTCGGGG              TATGTCACTATGAGG  75 74
        ftsE NONE
        ftsX  641155 ..  641175 +  -5.4  -5.85178   GCATGCTACTTTTCA            GGGGTC CTTTACTGT GACCCC            TTTTTTTTGACTGTT 100 298
        rpoH  642210 ..  642227 + -12.7  -5.45802   TCCTCCGGTAAGAAG             CAGGGCC TGAT GGCCCTG              TTTTTGTTTTGCGGG 100 46
         can NONE
        hutC  643719 ..  643736 + -12.7  -5.37345   ATTAAGCATTTAAAA             GCCCACC TCTC GGTGGGC              TTTTTTGTGCTTACA 100 53
 JC965_03210 NONE
 JC965_03215  646013 ..  646031 +    -8  -2.75712   ACCAGTTGACCAAGT             AGTGGCGC ACC GCGCCGCC             TGATTGCATCGCTAA  57 24
 JC965_03220 NONE
        hutH  649324 ..  649342 +   -16  -4.71222   AGCAACCATAAAAAA             GACCGCCC ATG GGGCGGTC             TTTTCATTTTCGTCT 100 52
        csrD  654846 ..  654884 +  -5.9  -3.55761   GAAACAGCCCCCACA   TCGCCTTGCCACTGTAG ATGGG TTCCAGCGGCAAGCCGG   TTTCGGCACTGAATG  57 159
 JC965_03250 NONE
 JC965_03255 NONE
 JC965_03260  657858 ..  657876 +  -5.9  -4.74504   GTTAAGCGGCATGTC             GGCGGGA CGGGA TCCCGCA             TTTTTGCCTTCCCAT  78 36
 JC965_03265 NONE
        mshL NONE
 JC965_03275 NONE
 JC965_03280 NONE
 JC965_03285 NONE
        mshE NONE
 JC965_03295 NONE
 JC965_03300  665718 ..  665737 +  -2.1  -2.71144   GTTTGATGAACAAAT            CTTGAAC AGCATC GTTCTAG             TGGTTCGGCGACATG  38 21
 JC965_03305 NONE
 JC965_03310  666938 ..  666955 + -12.7  -4.99435   AATACGTGTTGACAA             GCGAGGC TTCG GCCTCGC              TTTTTCATTATTCAA 100 39
 JC965_03315 NONE
 JC965_03320 NONE
 JC965_03325 NONE
 JC965_03330  669304 ..  669318 +  -4.3  -2.81702   AGCTTTCGATGGAGT               GAATC CATGA GATTC               TGGTTGCTGGTCTTA  44 16
 JC965_03335  672345 ..  672383 +  -4.8  -4.04413   CCCGGGCTGACACGG GGAGAT-AGACGCATTGCT GTAC AGCG--GCGTCTTATCTCC  TTGTTTCGTAGTGTT  61 43
 JC965_03340  673591 ..  673611 +  -8.2  -5.02074   TACGAATAAGACCCA            AAGCCGGC CGAGC GCCGGCTC            TTTTTTGACGACTCA  90 32
        mreC NONE
        mreD NONE
         maf  675671 ..  675682 +  -5.8   -2.5409   GTAATCCTCTCGTCA                GCAG TGCG CTGC                 TGAGTTACCCGTTGT  48 37
         rng NONE
 JC965_03365 NONE
 JC965_03370  682074 ..  682106 +  -3.9  -2.76261   CATGCCGGTGCTGCA      ACACGCCCGCCTGTT GTG AGCCCGCGGCCGTGG      ATTTAACCGTTACGA  43 7
        tldD  683721 ..  683755 +  -6.3  -2.77148   TCATCCACCCTTATC     TGGGCGAGCAGGCGA TCCTT TCGCTTGAACTCCCA     TCCTGTCTTGATCCG  49 148
 JC965_03395  687038 ..  687065 + -14.8  -3.84451   GGGTGAGAAAGAAAA        GGGGCCGGCTCC GTGA GGAATCGGCCCC         TTTGCGTTTGCCCCC  95 55
 JC965_03410  688985 ..  689004 +  -7.8  -2.91264   GACGTCAGGCAAGGA            GGCCGC CGTGAGTT GCGGCC             TGTCTGCATCGGGCG  56 74
        metH  695010 ..  695024 +  -3.5  -4.25283   CGCACTGGCGGAAAA               TCCCA AGATA TGGGG               TTTTGATCCCGCCAT  63 170
 JC965_03430  696052 ..  696064 +  -7.7  -3.05596   TGGCGCCGTCTTGCA                GAACG GTC CGTTC                TTGAGTGCGGCACTC  57 77
        rimK  697122 ..  697137 + -11.8  -3.80018   GACAGATAAATACAG              GGCGCC CTCG GGCGCC               TTGTTGCTATCTGGG  83 58
 JC965_03450  699708 ..  699724 +  -3.6  -2.72344   GCGGACCGGGAAAAA              TTGCCC GTCCG GGGCCA              TAGTTAAACCTCACC  42 50
 JC965_03455  700247 ..  700262 +  -3.2  -3.72453   CCTCGACGCCGAAGA              GTGAGA CCTC TCTCCC               TTTCCCCTTGTTAAT  53 22
        thiC NONE
        thiE NONE
 JC965_03470 NONE
        thiS  705278 ..  705304 + -12.3  -2.58243   CGCAGTCCCATCTTC        GAGCGCCCTGCC TTGC GGCGGGGC-CTC         ATCTCTTCTTATCGC  70 52
 JC965_03480 NONE
        thiH  707400 ..  707444 + -17.3  -4.28115   CTGCAGTAAGAGATA GCGGCAAGCAGATCGGAGGGG CAGCT CCCCGCC-A-CTGCTTGCCGC TTTGCTTTGTTTGCT 100 53
 JC965_03515 NONE
        rssA  718436 ..  718449 +  -9.5  -5.64421   TAAAAGACAAAAAGA               GCGCC AATA GGCGC                TTTTTTGTTTCGGGT 100 54
 JC965_03535  721236 ..  721260 +  -9.4  -3.13522   ATGGGCATAAAGTGT         GCC-ACGTCAT CGGA ATGACGTCGGC          TGTTCGTGGCGGAGT  63 120
        ompA  722495 ..  722514 + -13.6  -4.41956   AGGTAACGTAAAAAA            GGGGATGC CACG GCATCCCC             TTTTGCTGTCTCTCT  95 54
        ompA  723905 ..  723921 + -10.8  -5.14563   CACCTGTTGCAAAAA              GGGGCC ATTCA GGCCCC              TTTTTTAATGCCCGC 100 50
 JC965_03550  725191 ..  725208 + -11.3  -3.41839   GCCGTGCACAAAAAA             GGGATGC CGAG GCATCCC              TTCTGCGTGTCTGTC  75 58
 JC965_03565  729436 ..  729454 +  -5.8  -3.31144   AATCAGAGGCGGGGT             GCGCCGGC CAT GCCGACCC             TTGTGCCCCTGCCCA  54 121
 JC965_03570  729759 ..  729784 + -20.5  -4.83615   CAGCCCCGTCATCAC         CGGATGCCGCC CTCA GGCGGCATCCG          TTTTTGTGCGCCCTG 100 44
 JC965_03580  732575 ..  732591 + -15.1  -3.89435   CATCCTTGCACCAAA              GCCCCGC CAT GCGGGGC              TTTACCTTGTTTGCC  95 49
 JC965_03585  733415 ..  733434 + -13.6    -4.323   GTAAAATGCAAAAAA            GCCACGAC CAGA GTCGTGGC             TTTTGCGTATTTCGC  95 75
 JC965_03595  736983 ..  737006 + -18.2  -4.10552   CCCGCACACAAAAAA          GAGGGGACGC CGCG GCGTCCCCTC           TTTCATTTCATCACC 100 49
 JC965_03615  739665 ..  739695 + -11.1   -4.8543   CTTCCATGTACACAT      TTGCCCGC-CGCTC ATTC GAGCGTGCGGGCTG       TTTTTCTGAAGGTTG 100 66
 JC965_03725  760105 ..  760122 + -14.1  -4.74801   TCCCATGATCCACAA             GGGCGCC TGCG GGCGCCC              TTTTTCATGCGGTTC 100 46
 JC965_03735  761934 ..  761955 + -14.5  -3.17212   GCCAGCACCATGAAA           GAAGGGAGC CTCG GCTCCCTTC            TTGCTGCCCTCGTCA  81 45
 JC965_03750  764434 ..  764451 +  -9.1  -4.52857   CGGGGCAAAACAAAA             GGGAGCT CAAA GGCTCCC              TTTTATCTGCGCAGT  83 57
        slyA NONE
 JC965_03770 NONE
 JC965_03775  769630 ..  769652 +  -9.1  -5.47218   TGGATGGCTCCCTTT           CGCCCCG CTTGCCTGC CGGGGCG           TTTTTTTGCCTGCCC 100 58
 JC965_03780  770174 ..  770194 + -18.3  -4.15328   ACAGCCCACACGAAA            CACCCCGGC CTG GCCGGGGTG            TTTGTCATTTCACTT 100 59
 JC965_03805  775118 ..  775135 + -14.1  -4.08706   CCCACCAACGACAAA             CCCGGCC AGTG GGCCGGG              TTTGTCTGCTCAAAC 100 42
        cysZ  782684 ..  782699 + -11.8  -4.50193   ATCATGATCAAAAGA              GGGGGC GAAA GCCCCC               TTTTCATTACTTAAT  91 49
 JC965_03830  783457 ..  783470 +  -9.5  -5.45652   ACGAGCATCAAAAAA               GCGCC ATAC GGCGC                TTTTTTGTTGGGCAT 100 73
 JC965_03855 NONE
 JC965_03860 NONE
 JC965_03865  789199 ..  789210 +  -3.6  -4.68593   TCACCTACGTTCTCT                CCCG TATC TGGG                 TTTTTGCCTGATGAA  72 3
 JC965_03870  790409 ..  790426 + -12.7  -5.14563   CCCGAATGCCTACAA             GCCGGTC AACT GACCGGC              TTTTTTCATGGCCGC 100 47
 JC965_03875  792739 ..  792757 +   -16  -5.47159   TGGCCTGAATAAAAA             GGGGAGCC GAT GGCTCCCC             TTTTTTGTCTTGCCG 100 46
 JC965_03885 NONE
 JC965_03890  794949 ..  794962 +  -3.1  -4.40561   TGGCCAGCTGGCGCT               GA-CCC GAC GGGCTC               TTCTTTTTAAAAACC  64 24
 JC965_03895  795889 ..  795917 +  -4.5   -4.8667   AAACTGAAAATGAAA        CGGGCCGCA AAAATTGAGCG TGCGGCCCA        TTTTTATCCGGTATA  78 34
 JC965_03900  797201 ..  797218 +  -8.4  -3.05384   CTAGCGTCCCTCCAG             CAGGCG CTGCTC CGCCTG              TTCCATGGCCACGGC  60 68
 JC965_03910  800307 ..  800343 +  -7.9  -4.36914   ATGTCAATCCGCATC   CGGGGTGACG-GGGGG CCGCCA CTCCCACGCCACCCCC    TTTTCTGGCGCCAGA  77 80
 JC965_03920 NONE
 JC965_03925  804347 ..  804365 +   -16  -5.40072   GCGACTGACCCCCCA             CGCCCCGT ATC ACGGGGCG             TTTTTTTACCCCGCA 100 33
 JC965_03930  806394 ..  806408 +  -5.6  -3.64703   GAGCTGGCGCGCCTT               GCCGAG CGC CTCGAC               TTTGCCTGACGCCAG  56 2
 JC965_03935  807040 ..  807056 + -15.1  -5.41746   GACCCGCAACAACAA              GCCCCGC ACT GCGGGGC              TTTTTTTCGGGAGTT 100 39
 JC965_04000  818077 ..  818104 +  -7.1  -3.15999   GTAGGCCATCGTTTG        TTGTTTGTGGG AGAGCC CCCATAAGCAA         TTGGGTCTGTAACAG  54 231
        rplM NONE
        rpsI  819011 ..  819029 + -14.6  -5.84381   AGGAGTGTCAAAAAA             GCCTGGCA ATT TGCCAGGC             TTTTTTTATTGGTAA 100 63
        petA NONE
 JC965_04020 NONE
 JC965_04025  821842 ..  821872 + -13.5  -4.27774   GAGTAATATGACGCA      CGGCAATGAAGACA GACA TG-CTTCATTGCCG       TTTCTGCTTTTTAAT  95 53
        sspA NONE
 JC965_04035  822964 ..  822981 + -12.7   -5.1861   TCATCAAATAAAAAA             CGCAGCC TGAA GGCTGCG              TTTTTTCATCCTGCC 100 30
        rsmI  827326 ..  827345 +  -2.1  -3.55761   GAGCACTATTAATTG            CCGTAAA CCGGAA TTGACGG             TTTACCCCGTCCGTC  48 29
        rnpB  827783 ..  827808 + -17.7  -5.07486   GACCTCTTTCCTGAA         GAGCCTTGCGA TTTA TCGCAAGGCTC          TTTTTATTAACCATA 100 37
        mraZ NONE
        rsmH NONE
        ftsL NONE
 JC965_04085  831695 ..  831708 +  -3.7  -4.65895   GCGCACCGCGTACTT               GACGG GCAT CCGGC                TTTTTCCATCGACCC  69 24
        murE NONE
        murF NONE
        mraY NONE
 JC965_04105 NONE
        ftsW NONE
        murG NONE
        murC  840868 ..  840879 +  -2.2  -4.08767   CGGTCTGCAAGTGGC                CG-GC ATG GCGCG                TTTTACGGGGATCGA  56 92
 JC965_04125 NONE
        ftsA  842874 ..  842884 +  -3.2  -2.61429   CGGGTCAGCAACTGG                 TTGC GTG GCGA                 GTTCTAAAGATTTTG  40 8
        ftsZ  844075 ..  844103 +  -2.5   -4.3255   TCCTGCGCAAGCAGG       CAGACTA-AGCC TCTGAT GGCTCTGGTTTG        TTTGTTGCTTAAGGA  60 18
        lpxC  845117 ..  845157 +  -6.9  -4.69214   GGCCTGATAGCTGTG  CAACAGGACGTCGGT CATCTCTCCGC ACCGACGTCCTGTCA  TTTGTTTATTCCATC  79 34
 JC965_04145 NONE
        secA  848946 ..  848975 + -19.5  -4.07568   GACACCCTGCCATGA       TGAATACACCGCC TCCG GGCGGTGTATTCA        TTTTCGGACCAAGGA 100 39
 JC965_04155 NONE
        mutT  850620 ..  850633 +  -9.5   -5.1861   GATACCAACTAAAAA               GGGCC TGAG GGCCC                TTTTTTGATCGTGAA 100 50
        ampD  859052 ..  859081 + -16.6  -3.27923   TTGTGTTTTTAGAAT       CAATGGCTTGCC TTGTCT GGCAAGCCATTG        TTCATGCTGTTGAAC  90 58
        pdhR NONE
        aceE  862815 ..  862840 + -16.1  -3.11732   CGTAAGAGGATTGAG         TGTCGCGCCGG GTAT CCGGCGCGACC          TTGCCTGGGTTTAAA  85 36
        aceF  864872 ..  864892 + -15.4  -4.95876   GTCCTGTAAGTGAGA            GGGCGGGC CCAGA GCCCGCCC            TTTTTGCTTCTCATT 100 32
        lpdA  866466 ..  866483 + -12.7  -5.27206   CGTTTCATAAGAAAA             GCCGCTC CATG GAGCGGC              TTTTTGTTGTCTGTC 100 50
 JC965_04250 NONE
        acnB  875954 ..  875973 + -13.6  -4.35524   CACTGAAAATAACAA            TGCCGCGT CTCG ACGCGGCA             TTTTCCATTTCAGGG  95 57
 JC965_04260 NONE
 JC965_04270  879366 ..  879377 +  -2.2   -4.4831   CCCCTATCCACCCCC                GACT GTAG GGTC                 TTGTTTTTCATGCCT  63 58
 JC965_04275  880876 ..  880888 +  -3.3  -3.23692   TGACATGACCGATAT                GCAAG ACA CTCGC                TTACTCATCCTCCTG  46 46
 JC965_04280  882066 ..  882085 + -11.4  -4.85918   CTGATATGCTGATAT            GACCCGCG CTCG TGCGGGTC             TTTTCTTATGTGATG 100 37
        mdtD  883713 ..  883750 +  -3.3  -3.53012   CCCGGCAGGCAGCCA   ATCTCGGTCTGCATCTC GTCG GCGGTGCAGATGGAGGG    TTTGGCACCGAGCGC  49 234
        plsY NONE
 JC965_04310 NONE
 JC965_04315  886060 ..  886078 +  -4.4  -2.72511   GTAGGTCACCAGTTC             GATTCCGG TAG CCGGCACC             ATTTGCCCAGATAGC  43 6
 JC965_04320 NONE
 JC965_04325  886251 ..  886270 + -13.6  -5.46706   GGAGCCAATTAAAAA            GCCCAGCA GCAA TGCTGGGC             TTTTTCTTTTCCCGT 100 34
 JC965_04340 NONE
 JC965_04345  890353 ..  890372 + -13.6  -4.76644   TTCGGTCAAACGAAA            GGGGAACC TCGC GGTTCCCC             TTTTTCATGCCTGTT 100 48
        pncC  894324 ..  894340 +  -4.4  -3.26545   CGGACTCCTGGCACT              GCTCAA ATAAA TTGGGC              TTGATACTGTATGCA  49 16
        recA  895491 ..  895510 +   -15  -4.15703   TAAGGAATGAGGAAA            GGCCGGGT TGAT ACCCGGCC             TTGTTGTTTATGGCG 100 38
        radC  898306 ..  898321 + -11.8  -4.72986   GCTGGCTGTGACGAA              GGGGGC TTCG GCCCCC               TTTTTGCTGCGCATC 100 30
 JC965_04395  900613 ..  900642 + -17.1  -3.97674   AGTCTGAATCCCCAC       GCGGCAGGGGCCG GCAG CAGCCCTTGCCGC        TTCTTTCGCTGCTGC 100 34
 JC965_04400  902747 ..  902770 +   -16  -3.24747   CTGCACCGCAGATAG          GCGCTCCGGT TCCG ACCGGGGCGC           TTCATGCTGTCGAAA  87 43
 JC965_04405  903895 ..  903928 +   -21  -2.95091   AGCCTGACGGCCGCC     TACCGCGCCCCGCC CATTGC GGCGGGGCGCGGCA      TCTCTCAGTTCCAAT 100 34
 JC965_04425  907227 ..  907260 +    -7  -3.21595   AGGCGAGCACATTGT    GA-CTATTTCGGTCTT GGTC AAGACCG-AATAGATC     TTGCTCGGCTTTATT  56 71
 JC965_04430  908311 ..  908325 +  -8.6  -3.21912   AGTAAGGGGGACGTT               TTGCAG TCC CTGCAA               TTCGTCCCTTAGCAG  62 36
 JC965_04435 NONE
 JC965_04440  909677 ..  909688 +  -5.8  -3.54129   CGGCTGAAAACCCGC                GCCA TTGC TGGC                 TTTGCGCGCCCTCTA  56 134
 JC965_04445 NONE
 JC965_04450 NONE
 JC965_04455 NONE
 JC965_04460 NONE
 JC965_04465 NONE
 JC965_04470  914608 ..  914624 +  -4.4  -3.21416   GCCTTCACTTTCCCC             GAGC-GG CAAG CCAGCTC              TTCATCATGGCGATC  47 320
 JC965_04520 NONE
 JC965_04525  927018 ..  927034 +  -6.5  -3.33492   TGGCCATGTCCAGCA              GCACCTG GCT CACGTGC              TTGTCCGCTACCTCA  55 111
 JC965_04535 NONE
        cueR NONE
         fdx  930921 ..  930952 + -12.9  -3.25823   CACTAGGACCCAGCG      TGCCGCCGCGGGC GCGCCG GCCTGCGGCGGGG       TTGCTCTGGCAGACG  78 35
 JC965_04550  932084 ..  932098 +  -5.7  -4.26076   TCTTGGCGTTGGGGT               CGATC GTTTG GATCG               TTTTCGTAACGGTGC  71 222
 JC965_04570 NONE
 JC965_04575  934252 ..  934278 +  -8.7  -4.88407   ATTTCCTGACCGACA        CGCCGCAACGCG CCTG CGC-TTGCGACG         TTTTTCGTTGGCTCG  90 68
 JC965_04585 NONE
 JC965_04590 NONE
        trbB NONE
 JC965_04600 NONE
 JC965_04605 NONE
 JC965_04610 NONE
        trbJ NONE
 JC965_04620 NONE
        trbL NONE
 JC965_04630 NONE
        trbG NONE
 JC965_04640 NONE
 JC965_04645  946732 ..  946758 + -22.4  -3.45945   CCAGCAACATCCATC         GAACGCGCAGCC CAA GGCTGCGCGTTC         TTCATTCTGGATGCC 100 58
 JC965_04655  949487 ..  949504 +  -4.9  -3.90318   GCGCGCCGCCTTCCC             CGATCGCA ACA TGC-ATCG             TTTCTGACATGCTAA  59 1
 JC965_04660  951265 ..  951283 + -14.6  -4.77036   GGCAGGCAACAAAAA             GGGCTCCA GCA TGGAGCCC             TTTTTCATGGTGGCG 100 45
 JC965_04675 NONE
 JC965_04680 NONE
 JC965_04685  955013 ..  955028 + -11.8  -5.53991   CTTCTGTCCACAAGA              GGCGCC TTCG GGCGCC               TTTTTTTGATGGGTC 100 57
 JC965_04690  955902 ..  955926 +   -10  -3.85698   CGGCATAGATGGTTA         CCTGCATGCCG GCGC CGGC-TGCGGG          TTTCTCCCCGGCGGC  76 295
 JC965_04700  957758 ..  957776 +   -16  -4.10657   GGCCGGAAAAGAGAA             CGCCCCGA TCA TCGGGGCG             TTTTGCAGGGTGTCA 100 124
        sgrR NONE
 JC965_04725 NONE
 JC965_04730  963181 ..  963200 + -12.1  -4.73388   CAGCGTCAAAGAATG            GGGGCCC ACTTGC GGGCCCC             TTTTTCATGCCGGTT 100 47
 JC965_04745 NONE
 JC965_04750  966241 ..  966264 + -18.2  -2.74192   TTTCACCTGATGAAA          GAGACCCGCC TGTT GGCGGGTCTC           TGCTATTGAGGGGTC  88 48
 JC965_04795  978456 ..  978475 +   -15  -5.17744   GTTTGGCAATGAAAA            GGGCTCCC GAAC GGGAGCCC             TTTTTGTTGATGTGT 100 50
 JC965_04805  981049 ..  981069 + -16.9  -2.62184   GCGAATGATATGAAA            CAGGCGCCT GTC AGGCGCCTG            TGGTCTGGCCGGGCG  85 364
 JC965_04820  984276 ..  984304 + -17.5  -5.27335   TGAGATGGTCACCCC        CACCCTGTGAGCG GTA CGCTGACAGGGTG        TTTTTCTTTCAGGAG 100 93
 JC965_04825  984911 ..  984928 +  -5.5  -3.85698   AAGTAGGGCTGCAAG             GCCTTTG GTAT CAATGGC              TTTCTGAACGGAAGA  59 141
 JC965_04830 NONE
 JC965_04835  986555 ..  986571 + -13.7  -5.28176   GCCAGAATGAAAAAA              GGAGCGC CTG GCGCTCC              TTTTTTGTGGGTGAC 100 60
 JC965_04900 NONE
 JC965_04905  998122 ..  998141 +  -3.4  -2.98823   ATGGGGCCTTTGTTG            TGTTCGGG CATG CCCGTGCG             TCTATATGAAAGCCA  42 83
        proQ NONE
         prc 1000855 .. 1000872 + -12.7  -4.68908   GCAACGAAATGACAA             GGGCGAC TCTG GTCGCCC              TTTCTTTTGCCTGAA 100 46
        pepN 1003601 .. 1003629 + -18.9   -4.7497   TAAGCGTCACGACGG        CGGGCAGGGGAGT CTG GCTCTCCTGCCCG        TTTTTCATGGATGAC 100 38
 JC965_04925 1003966 .. 1003984 + -10.4  -3.85698   GTGCGATTTTCTGAA             TTTTGCCA ACT TGGCAAAA             TTTATCACAACCCAA  77 114
 JC965_04930 1009002 .. 1009022 + -15.4  -5.40072   GGCATAACCCCAAAA            GCCCCGGC CAGTT GCCGGGGC            TTTTTTTAAGGAGCA 100 34
        pyrD 1010106 .. 1010118 +  -2.6  -3.05384   TCGACATGGAATAAA                GTCG AGGGA CGGC                TTAGATAAGGGCACC  42 80
 JC965_04940 1010786 .. 1010800 +   -10  -4.43844   TCTTTTTCCTTCGTC               TGGTCG TCA CGACCA               TTTTCTGCCTGGTCC  84 138
       rlmKL NONE
 JC965_04950 1013399 .. 1013424 +  -8.3  -5.14563   GATTTGACGACAAAA         CGGG-GGCAG ATTCACG CTGCCGCCCG         TTTTTTCATAAGCAA  90 45
 JC965_04955 NONE
 JC965_04960 1017127 .. 1017149 + -11.3   -5.7946   GGGGTAAAAATGAAG           GCGACCGGT GAAAA ACTGGTCGC           TTTTTTTGTTCCACG 100 132
         rmf 1017389 .. 1017405 + -13.7  -3.84394   CATTACAAAAGGAAA              GGGGCCA TCG TGGCCCC              TTTACGTTGTCTCTG  88 57
 JC965_04990 1023792 .. 1023806 +    -7  -3.02144   TTGCTGCTGCCTTCA               TGCCGG CTC CCGGCC               TGTTGACCAGGATCC  53 500
        zapA NONE
        ssrS 1033635 .. 1033653 + -11.7  -5.30616   TACCTACCCAAAAAA             GCCCGTC ATCAC GACGGGC             TTTTTCTTTGCCTGC 100 36
        suhB 1042903 .. 1042926 + -16.8   -5.5112   TACCCGCGAAAAAAA          TGCCAGTCGG TTCG CCGACTGGCA           TTTTTTATTCCTGAC 100 48
         rnt 1046831 .. 1046848 +  -3.3  -5.61596   CAGAAGATGCGTCCC             TTGGCCG GGAT CTGCCGA              TTTTTTTCTCGACAT  88 150
 JC965_05105 1048281 .. 1048298 + -12.7  -4.46073   AGCAGACAGACAAAA             GGCGACC CCTG GGTCGCC              TTTCTTGTCTTGCAC  95 51
 JC965_05150 1061063 .. 1061073 +    -4  -3.61398   CTATTTCCTGCCTGG                 CAAT GGA ATTG                 TTGTTAACCGGAAAA  52 312
 JC965_05225 1077092 .. 1077108 +  -3.6  -3.18264   TGCCCACCTTCAGCA              TGGCGG GCACA TCGCCG              TTCCTGGCTGCCAGC  44 223
 JC965_05235 1079157 .. 1079177 + -12.6  -4.07568   AGGCGGACAAAAAAA            GAGCGACC ATCAA GGTCGCTC            TTTTGCACCGGACAA  91 464
        ubiG NONE
 JC965_05255 1083677 .. 1083698 + -10.2  -4.59853   CCCAGCAGCGCACCA           GAGGGATC CCGGAC GATCCCTC            TTTTTACGGGCTTGG  93 150
        nrdA 1086431 .. 1086455 + -18.6  -2.95483   ACGCACTGATAAACC          GGGCGGGAGC ATCAA GCTCCCGCCC          TCCTGTTTTCCCTAT  95 48
        nrdB 1087737 .. 1087761 +  -2.7  -2.78384   CGCCGGAGGGGCAAG          CCCCCCAGG TACAGAC CCTGGACGG          TGTGCTGCACCCCCA  41 141
 JC965_05270 1088027 .. 1088048 + -17.3  -5.14965   CCCCGCAAACAAAAA           GCCGCCGGA TTGC TCCGGCGGC            TTTTTTCATGGGAAT 100 62
 JC965_05280 1089709 .. 1089726 + -14.1   -3.4072   CCCCTCAACAAGAAA             GGCGGCC CCAG GGCCGCC              TTGTCATGAAGGGTG  85 57
         cra 1095199 .. 1095215 +  -9.3   -5.0133   AGCCTGACGGGCAGC              CTCCCCC TGA GGGGGCG              TTTTTTCGGCGCATG  91 360
 JC965_05305 1096708 .. 1096738 + -22.6  -2.71011   AACGCCGCAAAGAGA       CACGCCCCGCCTAC CCA GTTGGCGGGGCGTG       TCATTGGCACGGGCT 100 63
 JC965_05310 NONE
 JC965_05315 1098028 .. 1098048 + -18.3  -4.96848   ACCAGGACAAAAAAA            GCCCCGCCA GAT TGGCGGGGC            TTTTTGTATCAACCG 100 46
        smrB 1103604 .. 1103623 + -10.7  -5.60993   AACGCCATAAAAAAA            CCACCGC CAGCTT GCGGTGG             TTTTTTTATGGCGCC 100 72
 JC965_05380 1109071 .. 1109086 + -11.8  -5.49234   CCCTTCAAGCCAGAA              GCGCCC CCAG GGGCGC               TTTTTTGTTGCCTCT 100 47
 JC965_05395 1111955 .. 1111984 + -22.3  -3.92869   ACCCCGTCACCATCA       CGACAAGGGGAGC CGCG GCTCCCCTTGTCG        TTTCTGCATGCCTGC 100 40
        elyC 1123615 .. 1123629 +  -2.8  -3.32727   GCCGGGTCAGCTATC               TTGGGC TCG GTTCAA               TTCATATAATGTTGC  46 103
 JC965_05450 1124429 .. 1124469 + -18.3  -3.83205   GGCGCCGCCAAGTAA  GCGCCAAGCAAAGAGGGGC CCC GCCCCTCTTTGCATATCGC  TTTCCTATGGACCCT 100 26
        pfkA 1125565 .. 1125579 + -11.4  -5.60993   TGGTCTGACAAAAAA               CCCTCC TCT GGAGGG               TTTTTTTATGCGGGC 100 47
 JC965_05460 1128125 .. 1128148 + -16.8  -5.49729   GACGCCGGATGCAAA          CAAGGCAGCC CATG GGCTGCCTTG           TTTTTTTACATCCTT 100 43
 JC965_05505 NONE
 JC965_05510 1137254 .. 1137290 +  -6.6  -3.29461   GCCGTCATAAAAGCC   CACCNTCCGGC-CT-GCA TCC TGCCAACGCCGGAAGGTG   TTGTAGACCGAATTC  56 422
        ruvA NONE
        ruvB 1141578 .. 1141604 + -10.8  -5.32882   GGGGCTTGCAATAGA         AAGAGGGAGGCA TCA TGCCTCCCTCGA         TTTTTTGTCCTGATA 100 183
 JC965_05540 NONE
        cydB NONE
        cydX 1145417 .. 1145461 + -11.4  -2.83715   GAAGACAAGTGACAG GCTCGCC-CGGCTGGCCGCTCC TCT GGAGCG-CCAGCCATGGCAAGG TCTGATGCTGCTGGC  69 29
 JC965_05555 1145714 .. 1145749 + -16.2  -5.00884   CTACCTGCCATAAAT    GATGAAGGAGGTCGGC ATGA GCCCACCTCCTTCTTC     TTTTTTGAGGGGCGT 100 28
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA 1148677 .. 1148691 +  -2.1  -2.82895   AAGAGAGTGTTTCTG               CTTTG ATTGG CAAGG               GTTGTTGATCAGAGA  39 39
        tolB NONE
         pal 1150674 .. 1150691 + -11.3  -4.88918   TCGTTTATATGCAAG             CGGCCAT TTCG ATGGCCG              TTTTATTTGCACTAA 100 60
        ybgF 1151601 .. 1151624 +  -5.3  -4.26344   CAGAGTCTGGCCAAG          CTGTGACAT TGCTGC ATGTCACTG           TTTTCGTAACACTCT  67 20
 JC965_05595 1151857 .. 1151880 +  -3.3  -3.03619   CAGCACGACCCACCA          TT-TCTTCAC AGCAG GTGAAGACAA          TATTCCCAGGTCGTT  42 26
 JC965_05600 1151979 .. 1151991 +  -6.2  -3.15579   ATGTTGTAACACTGG                CCGC CACAT GCGG                TTCGTGAAAGGTTCA  52 40
 JC965_05605 NONE
 JC965_05610 1152198 .. 1152210 +  -6.2  -3.15579   ATGTTGTAATACTGG                CCGC CACAT GCGG                TTGGTGAAAGGTTCA  52 40
 JC965_05615 NONE
 JC965_05620 NONE
 JC965_05625 NONE
 JC965_05630 NONE
 JC965_05635 NONE
 JC965_05640 NONE
 JC965_05645 NONE
 JC965_05650 NONE
 JC965_05655 1153087 .. 1153097 +  -3.2  -2.94322   CACCATCATTTCAGT                 CTTG TCC CAGG                 TCGTTTAGCTCAGCT  42 36
 JC965_05660 1153181 .. 1153198 + -12.7  -5.00138   CCACCATATAGAAAA             GCCCGCA GCGA TGCGGGC              TTTTTCGTTTCCGTC 100 35
        nadA 1156870 .. 1156891 + -15.9  -4.57482   ATGGCAAGATGCAAA           GAGGGCTCC CGCG GGAGCCCTC            TTTATTTATCCGTCA 100 50
        malQ 1161445 .. 1161470 + -19.1  -3.03124   TGTGACTCACTTTCA         TCCGCTTCGGC TTCG GCCGAAGCGGA          TGTTCAGCCATCAAA  95 57
        glgB 1163662 .. 1163672 +  -6.8  -2.62613   ACCTTGTTCATCAAA                 CAGG AGT CCTG                 ATGTTTGAAATGGAA  50 14
        glgX NONE
        msrB 1166270 .. 1166295 + -21.9  -5.36441   TCCCCGACACGACCA         GCGGCGCCTCC CTTC GGAGGCGCCGC          TTTTTTATCTCCCCC 100 41
 JC965_05730 NONE
 JC965_05735 1171168 .. 1171183 + -11.8  -5.42862   CATAAAATGACATGA              CCGGCC ATGG GGCCGG               TTTTTTTCGCGATCT 100 55
 JC965_05740 1171682 .. 1171708 + -11.7   -4.2828   TGATAGCAGAGACAA        G-AAGAGGAGGC CCTG GCCTCCTCTTGC         TTTTGGTGCATCCCC  89 103
 JC965_05755 1174558 .. 1174584 +  -2.2  -3.05384   GGCGCGGGGATCACA        GTTCGGCGACG GGATGG CGG-GCCGGAC         TTGCATCGCGGCGCC  42 46
 JC965_05760 1175625 .. 1175641 + -10.8  -4.85599   CGGCATAAACAGAAA              GGGGCC ATGTC GGCCCC              TTTTTGTCAGCTCCC 100 57
 JC965_05770 1177279 .. 1177298 + -10.7  -5.54907   CGGGCAGACAACAAA            CCGGAGC ATCCCC GCTCCGG             TTTTTATTTTGTGGC 100 53
 JC965_05775 1179099 .. 1179116 + -10.5   -5.4505   ACTGTTCATTGCAAA             GGTCGCC CTCA GGCGGCC              TTTTTTGTTGCGGCG 100 350
 JC965_05780 1180995 .. 1181010 +  -8.2  -2.87132   ACCTGCAAAATGAGC              CCCTGC AACA GCGGGG               TCTGTGCCACCGGCC  55 520
 JC965_05800 1184951 .. 1184962 +  -2.2   -2.9155   CCTTGACCGCCCTGT                GCGT GGTG ATGC                 TCTGGTATTAACAGC  41 3
 JC965_05805 1185700 .. 1185713 +  -9.5   -5.4505   ACCGGCTGTCTTGTT               GGCCC TTCG GGGCC                TTTTTTATTGCCGGG 100 59
 JC965_05810 1186498 .. 1186539 + -14.3  -4.23218   GCCCTTGCCTGATGT GGTGCGGGCGGGGTGAGGGG GCG CCCCTCTCGGCGCCC-CGCC TGTTTTTTCCTCCTT 100 29
 JC965_05815 1187958 .. 1187974 + -13.7   -4.8048   GACGCCCAGCAAAAA              GCCGCTC CAT GAGCGGC              TTTTTCATATCAGGC 100 47
 JC965_05825 1190556 .. 1190580 +  -5.6  -3.28924   GGTCAGAGGGGGGCG         CCCGCTGACGG CGGT CTG-CTGCGGG          TTGTCAGCCGAAGTC  52 70
 JC965_05840 NONE
        viaA 1194994 .. 1195005 +  -7.2  -3.05935   GCTCCTGATCCAGCA                GCGG CTGA CCGC                 TTGGCTGGGCAATAT  54 94
 JC965_05855 1198045 .. 1198068 +  -5.2  -4.54727   CTGGGTATTTTTCAC          TCGCGCGG GTATAATG CCGCGCAA           TTTTGCTTTGACCCG  73 70
        prfC 1199877 .. 1199892 + -11.8  -5.55769   TGATGACCAGAGAGA              CCCCGC TTCG GCGGGG               TTTTTTGTTATGGGG 100 68
 JC965_05865 NONE
 JC965_05870 1200964 .. 1200994 +  -7.5  -2.61681   GGTGATCGGGCTCGC       GGGGTATCGACAG ATTGC CTGTCCGTCCCCC       CTTCTACCCTTGCGG  53 125
 JC965_05890 1204411 .. 1204440 + -19.5  -3.14931   TGGCGAGGATGGAAA       CAACAAAGGCTCC CGCG GGAGCCTTTGTTG        TTGCTGGGAACTCCC 100 41
        aguA 1207619 .. 1207633 + -11.4   -4.6955   GGTTGGTATTCAAAA               CCCCAC GCC GTGGGG               TTTTATCTCTTGATA 100 63
 JC965_05910 1209611 .. 1209626 +  -5.4  -4.83169   CTGAACTCAACCGGA              TCGGTA AATT TACCGG               TTTTTGTCAGCGACT  76 215
 JC965_05955 1216864 .. 1216895 + -17.4  -3.87815   GGGGCCACCATTTTC      AGACAAAGCCGCTC TTTT GAGCGGCTTTGTCG       TTTCTGGCGCTCACC 100 31
        zntR NONE
 JC965_05995 1226092 .. 1226106 +  -2.7  -4.57569   GGGGGAGGCAAGAGG               CGCAC AATCG GCGCG               TTTTTCGCCACCTGC  67 51
 JC965_06000 1226424 .. 1226452 + -23.3  -5.10767   AGGCATCAGCTAACA        CAATCAGGGCGCC AAT GGCGCCCTGATTG        TTTTTCTATTCGCTG 100 57
 JC965_06015 1229808 .. 1229824 + -10.8  -4.08349   TGATGAGCACACTCG              GGGGGC CTTGA GCCCCC              TTCTCTTTTTCAGGT  81 52
 JC965_06020 1230989 .. 1231006 +  -4.1  -4.31835   ATGGCTGACTGGCAA             TTGCCAG GTAA TTGGCGA              TTTGTTGTGCGAATT  63 81
 JC965_06025 1231506 .. 1231533 + -25.6  -5.61596   CACCTCATTGAAAAA        CGGGCCCGGCGC ACTC GCGCCGGGCCCG         TTTTTTTATGGCCAT 100 46
        cobA NONE
        cysD NONE
        cysN NONE
 JC965_06055 1238784 .. 1238803 +  -3.6  -4.36914   AGGGATGTGTTAAGC            GCTGC-TTA TGT TAACGCGGC            TTTTATCAAGACAGC  66 53
        cysC 1239723 .. 1239752 + -12.3   -3.7697   AGTGTCGAATATTGA       TAAATAAGGGGGC GTTT GCCCTCTTGTTTA        TTGTCTTCTAACTAT  83 52
 JC965_06130 1253060 .. 1253075 + -11.8  -5.00884   ACGACCAATAAAAAA              GGCGCC ATAA GGCGCC               TTTTTTGCGAGAAAT 100 16
         mpl NONE
 JC965_06145 1255861 .. 1255890 + -26.5  -3.88787   GGAGCGGACAAAAAA       GCGGCGCCGGGCT GTAA AGCCCGGCGCCGC        TTTGTCAACATCTGC 100 49
         hpt 1257311 .. 1257328 +  -9.8  -4.60797   CATCGACTGTCTTCA             GGCGGC GTCACA GCCGCC              TTTTCTGTCTCGAGA  87 79
 JC965_06160 NONE
 JC965_06165 1259080 .. 1259095 + -11.8  -5.27938   ACCCGCCAGCAAAAA              GGCGCC CTCG GGCGCC               TTTTTATTTGCACAT 100 48
        hrpB NONE
        mrcB 1271306 .. 1271325 +   -15  -4.09739   TTCAACTGACGAAGA            CGGGCAGC ACAG GCTGCCCG             TTTTGCAAGGATTGC 100 32
 JC965_06225 1271786 .. 1271807 + -17.3  -5.16237   TTTGACCATGAAAAG           GCCGCCCTG GGAA CAGGGCGGC            TTTTTTCATGGGGTT 100 68
 JC965_06240 1273876 .. 1273887 +  -5.8   -3.1505   CTGAAGGTGCTGCTG                CTGG TTCA CCAG                 TTGCTGGAGGCTGGT  51 329
 JC965_06250 1275032 .. 1275053 + -15.9  -4.06502   CGGAGAATGAAAAAA           GAAGGCGGG TCAC CCCGCCTTC            TTTCGTTTACGCCTC 100 41
 JC965_06255 1276202 .. 1276216 +    -7   -3.3382   GGCGAGGCCCGCCTG               CACGGG CAC CCCGCG               TTGGTATGTCATCCC  56 49
        clcA NONE
 JC965_06275 NONE
        erpA 1281370 .. 1281385 + -11.8  -4.84033   GCAGCGTGATATGAA              GGGCCC CGAG GGGCCC               TTTTCATTTTTGTAT 100 47
 JC965_06325 NONE
 JC965_06330 NONE
 JC965_06335 NONE
 JC965_06340 NONE
 JC965_06345 1290923 .. 1290939 +  -5.7  -4.58395   CGGACACATAAGGGC              GTCCGGC CTC GCTGGTC              TTTTTCCACGCTGCG  76 193
 JC965_06370 1298140 .. 1298155 +  -4.6  -3.08679   ACTGTCGATGGTGCC              CCGGAA CATC TCCCGG               TATTCGATCAGCCGA  47 299
 JC965_06380 1301563 .. 1301586 +  -7.5  -3.33509   TTGTCAGGATCGCGC          GAGGCG-GAA AGGTA TTCACGCCTC          TTGGCTTGTTTCCAC  59 128
 JC965_06655 1348996 .. 1349011 +  -4.6  -3.60234   GATCGTGGGTCTGGT              GTGCTG AGTG CAGCTC               TTTGGACGTCTGTGG  54 468
 JC965_06670 1351376 .. 1351393 + -11.3   -5.4505   ACAGGGATAAAAAAA             CCGACTC CAGG GAGTCGG              TTTTTTGTTGGGCGG 100 58
        queA 1356129 .. 1356143 + -12.8  -4.31433   CGGCTTCATATTACC               GGGCCC CTC GGGCCC               TTTGTTGTCAGACTG  93 89
         tgt NONE
        yajC NONE
        secD NONE
        secF 1360543 .. 1360560 + -14.1  -4.27117   TGCCGTAACAGACAA             GGGCGCC GCAA GGCGCCC              TTTCTCTTGTGGCCG 100 33
 JC965_06715 1361116 .. 1361134 +  -9.6  -3.44552   GTCAGGATAGGGATT             GGATACCT CAC GGGTATCC             TGTTGTTGCTCCCCT  70 137
        nlpI 1362055 .. 1362071 +  -9.4  -4.85129   GATCCCCACGAAAAA              GGCCTC TTGAC GAGGCC              TTTTTGCTGTCTGGT  90 53
 JC965_06735 1364755 .. 1364767 +  -6.2  -3.52113   CACGCAGGGTGGGGA                GGCG TCATC CGCC                TGTTTGTGCAGAAAT  56 97
        trmJ 1365589 .. 1365632 +  -9.7  -2.89191   GGGCACAGGATTAAT CCCGACTGATTTACTCAAG CATATA CTTGACTGATTTAGTCGGG TATGTGACCATATGC  65 27
        iscR NONE
 JC965_06750 1367453 .. 1367473 +    -9  -2.78384   TGGGCACATCACTGA            TCCTTGCC TGCAT GGCAAGGG            TCTGGTGAACAACGG  60 26
        iscU NONE
        iscA 1368332 .. 1368361 + -15.1  -2.79492   CCTTGCTCATCAACA       CAGTGGTGTGGAC GCCA GTCCATGCCACTG        CTTTCAAGTTCAAGA  81 128
        hscB 1368920 .. 1368932 +  -4.8  -3.05343   GGAACGATTCGAAGA                CTCG CTGTT CGAG                TCTTGACCCTCTAAC  47 7
        hscA NONE
         fdx 1371223 .. 1371247 +  -5.6    -5.252   TAATGATATGGTGAA         GGCCGTGACCC TTGA GGGA-GCGGCC          TTTTTTGTGCCCGTG  86 94
        pepB NONE
        pepB 1373989 .. 1374004 +  -4.6   -5.4251   CATTAGCATGCCGAT              CGTGCG CAAG CGCACA               TTTTTTCTCTCTGCC  88 121
         ndk 1374620 .. 1374635 + -10.4  -5.45813   TCTGCTGGTGACCAA              GGGAGC TTCG GCTCCC               TTTTGTTTTTTGGTC 100 46
   trmG/rlmN 1375863 .. 1375881 +  -3.9  -3.48276   GGATTTCCGTCAAAA             TGGTTTA ACTCC TAAGCCA             TTGTATAGACAGGAA  50 18
        tapF NONE
 JC965_06805 NONE
        ispG 1378730 .. 1378756 + -19.4  -3.87062   CAAAGGTTGAACCAT         GACGGGGCCACC TGG GGTGGCCCCGGC         TTTAGGTTGTTGATT 100 31
        hisS NONE
 JC965_06820 NONE
        bamB 1381994 .. 1382019 + -14.7  -4.06384   ATAATGTGAATATCC         GGCTCCTGGTC TTCG GACCCGGAGCC          TTTGTCGTCTTGAGA 100 48
         der 1383550 .. 1383571 +   -13   -5.1356   AGAAATAAAGCCCTG           CGGCTGCC CTTACC GGCAGCCG            TTTTTATTGGTGGCC 100 33
 JC965_06835 1383903 .. 1383918 + -11.8  -4.04719   CAAGGCATAAAAAAA              CCCGGC TGAT GCCGGG               TTTATACTGTGTGCT  87 31
        purL 1389778 .. 1389794 + -10.8  -5.61596   GCAAGAAACCAAAAA              CCGGCC CCAGT GGCCGG              TTTTTTTATGGGCAT 100 47
 JC965_06955 1411880 .. 1411890 +  -4.6  -3.14931   GCTGGTCCGGCAGGG                 GGGT TGT GCCC                 TTACTCCCAGGTCGG  47 171
 JC965_06960 1412246 .. 1412267 + -14.5  -5.45802   CTCGATAACGGAAAA           CGGCATGGA ATCC TCCATGCCG            TTTTTGTTTTCAGGG 100 46
 JC965_06970 NONE
 JC965_06975 1414587 .. 1414605 + -12.4  -3.30443   GCTTGCCGTTTCTTG             CCAGCCGG GTG TCGGCTGG             TTAATGTCATCGTCC  77 61
        ltaE 1415676 .. 1415699 + -18.2  -3.40522   TTCCTATCGCAACAA          CAAGGGCGCC ATCG GGCGCCCTTG           TTGTCATGGCCGGGT  95 47
 JC965_07030 1424093 .. 1424109 + -13.7  -5.37593   TTGCCAAAATAAAAA              GAGCCGC AAT GCGGCTC              TTTTTTCATTTCCGG 100 47
        blrA NONE
        blrB NONE
      blaOXA 1429952 .. 1429968 + -15.1  -5.61596   CTGATGCCAGCAACA              CCGGCGC CTG GCGCCGG              TTTTTTTATCCCCCT 100 37
        creD 1431463 .. 1431482 + -16.4  -3.89336   CCATAAGCAAAAAAA            CCGGCGCC CTCG GGCGCCGG             TTTGCATTTCATTGA 100 35
 JC965_07140 1447775 .. 1447798 + -17.4  -2.79952   GGTAAGCGACAGGCC          GGGCGGGGGC GAAG GCTCCCGCCC           TCCTTCCATTCATCT  87 36
 JC965_07145 NONE
 JC965_07150 1450283 .. 1450293 +  -2.4  -3.05562   ATCGCCATCGTCTGA                 CCGG GGG CCGC                 TCTTGAACCGTTTAT  42 26
 JC965_07155 NONE
        fhuB 1453224 .. 1453242 + -13.1  -4.43879   AAGCGCACAAAAAAA             GCCCGGG ATGAA CCCGGGC             TTTTCATTGCCTGCT  95 54
        dnaA 1461244 .. 1461254 +  -5.4  -3.03441   AACGGAGTGCACAGA                 TGCA GAT TGCA                 TGTTCCAGCCTGATC  48 47
        dnaN 1462394 .. 1462404 +  -2.4  -2.84812   CCAGTACGTGGTGAT                 GCCG ATG CGGA                 TCTAGTCGTGTCCCT  39 10
        recF NONE
        gyrB 1465949 .. 1465967 + -11.7  -5.54907   CGACAACCATCAAAA             GCCGCTC CTCGT GAGCGGC             TTTTTGTTTTCTGGA 100 51
 JC965_07235 1468499 .. 1468527 +  -3.2  -3.21962   GAAGCCCCGCAAGAT       CGAGATCAACGGCT GAC AGCC-T-GACCTCG       TTGCATTGCTGATGT  46 10
 JC965_07240 1469076 .. 1469097 + -15.9  -5.52384   CCACCTGATAGAAAA           GAGGCCTGC ATCT GCAGGCCTC            TTTTTTTCATGCCGA 100 54
 JC965_07250 1471135 .. 1471151 +  -7.9  -4.08706   GGTTGAGCCGATCGG              GCAGGGT GTC ACCCCGC              TTTATCTCCTGCAGC  71 272
 JC965_07260 1473015 .. 1473034 + -11.4  -3.61715   CGATCAGGGTGGGTT            GCTGGGGG TTAT CTCCCAGC             TTCTTGCGCAGGCTG  73 178
 JC965_07295 1483020 .. 1483039 +   -15  -3.94002   CAATGCACCGCACCG            GAGGGGCC CATG GGCCCCTC             TTTCATTGACTGGTC  95 52
         xni NONE
 JC965_07305 1485096 .. 1485111 + -10.4  -4.77173   CATATGATTTTAAAA              GGGAGC TTCG GCTCCC               TTTGTTTTATGCCAA  95 53
 JC965_07310 1485652 .. 1485669 + -12.7  -5.15634   CCAGACACAAAAAAA             CCGGACG TCAC CGTCCGG              TTTTTTCATGCCCTG 100 45
 JC965_07345 1492778 .. 1492801 + -18.2  -3.90291   TGCCACATATAAAAA          CGAGCCGACC CAGG GGTCGGCTCG           TTTCGTTGCAAGGCT 100 46
 JC965_07395 NONE
 JC965_07400 NONE
 JC965_07405 1503200 .. 1503215 +  -4.6  -4.12748   TTCCACCGCGTCCCT              GAACGG GTCA CCGGTC               TCTTTTTCTATACTC  61 57
 JC965_07410 1503621 .. 1503634 +  -2.3  -3.19192   CCCCTGAAACCTGCC               GCCCA TCCC TCGGC                TTGCCTTGGCTACGC  42 34
 JC965_07415 NONE
 JC965_07420 1506128 .. 1506145 + -12.7    -5.626   CACGGATACAAAAAA             CCGGAGC AGCT GCTCCGG              TTTTTTTATGCCCTC 100 53
 JC965_07430 NONE
 JC965_07435 1508763 .. 1508776 +  -9.5  -3.08471   CTGACCCTGCCCTGT               GCGGC CTCT GCCGC                TTGACTCCGGTTATG  66 203
 JC965_07440 1510439 .. 1510463 + -11.5    -5.626   CAAGCCATAATAAAA          GCCCATCTC TCACCAT GAGATGGGC          TTTTTTTATGGGCTG 100 69
 JC965_07455 NONE
 JC965_07460 1517196 .. 1517220 + -14.4  -2.91264   CGCGAATACGAAAAA          GCCCAACTGA ATAAA TCAGTTGGGC          TATATAGATGGCGGA  80 417
 JC965_07470 1518288 .. 1518307 + -16.4   -4.4261   TTGTTCATGAAAAAA            CGCCCCGG CATG CCGGGGCG             TTTTGCTATTCAGGC 100 49
        pheA 1537631 .. 1537660 + -20.9   -3.0094   GACCAGCAAAATAAG       CAGAAGGCGAACC CTGG GGTTCGCCTTCTG        TGTCTGTGCCTGGCG 100 62
 JC965_07590 1540292 .. 1540306 +  -2.8  -3.54475   GGAATCAAGGGTTTA               AAAGCA CAA TGCTTC               TTGTATAATGCCCGC  50 40
 JC965_07595 1540411 .. 1540447 + -18.9  -3.09004   GGAACGCCATACAAA    ACAAGGGGTTAGCATCG TCA TGATGCTAACCCCTTGG    TCGTTTTAAGCCTCG  95 32
 JC965_07600 NONE
 JC965_07605 NONE
 JC965_07610 1542351 .. 1542370 + -13.6  -4.43477   CTGTCCCCCCATCCC            GAGGCTGC ATTT GCAGCCTC             TTTTCATTCCATCAG  95 87
 JC965_07615 NONE
 JC965_07620 1544521 .. 1544536 +  -4.6  -3.24747   GCTCAGCACAATGCC              CTGCTC GGTC GGGCGG               TTGCTGGTCTCGCGC  48 142
         icd 1553976 .. 1553994 + -13.1  -5.60993   CGTTGAAATGCAAAA             CCGGCGC CATGA GCGCCGG             TTTTTTTATGGAGGA 100 48
        dsdC 1557279 .. 1557320 +  -3.1   -2.8055   ATGGTGTCAGAGCGC TGCCGGATGGTATAAAAACA TTA TGTTGTTAT-CCAATGGGCA TGCTATTCTCAAATC  41 275
 JC965_07690 1557807 .. 1557831 + -15.1  -4.19577   GGATCCGGATCTCGA          TAATGCCGCCT GCA GGGCGGCATTA          TTATTTTCAGGGTTC 100 46
        grpE 1571094 .. 1571111 + -14.1  -5.12068   CGCTGTTCTCACCAA             GCCCGCC GCTT GGCGGGC              TTTTTGTTGGATGTG 100 44
        dnaK 1573288 .. 1573332 +  -7.8  -3.08371   GACGACAAGAAGTAA GCCCGACCCGGATGGGCGAAG TCCG CTTCGCCCAT-CGGCTCAGAA TCTGTTCACGGTCTG  57 26
        dnaJ 1574699 .. 1574718 +   -15  -6.06723   ACCCGCGTTACCCAA            GCCGGCAC GGAT GTGCCGGC             TTTTTTTTTGCCCGC 100 46
 JC965_07755 NONE
 JC965_07760 1577496 .. 1577536 + -11.9  -2.68434   GCGATCAGGCGCAGA CGG-CTGTTGATCCGCGG CTAGAA CCGCGGGTCGACAGACCC  TACTCTCATGTGACA  70 16
 JC965_07765 NONE
 JC965_07770 1580347 .. 1580357 +  -4.6  -3.32844   CGATCACTGGCCGCT                 GGCG GCC TGCC                 TTGTACAATAGCCCG  49 4
 JC965_07775 1581424 .. 1581441 + -14.1  -4.91109   CGGAAGATGAAAAAA             GCCCCGC CAGT GCGGGGC              TTTTTGTCGTGGGGC 100 43
 JC965_07790 NONE
 JC965_07795 NONE
 JC965_07800 NONE
 JC965_07805 NONE
 JC965_07810 1588675 .. 1588694 +   -15   -4.4009   AGTCAGAGGTAAACA            CAGGGGGC CAAT GCCCCCTG             TTTTCTGGCATCACA 100 29
 JC965_07820 NONE
 JC965_07825 1592935 .. 1592957 + -17.8   -4.1891   TCAGGACAAAAAATC           GAGGGAGGCA TGA TGCCTCCCTC           TTTCTATTGCAAGCC 100 59
        alaS NONE
 JC965_07875 1605692 .. 1605706 +  -2.8  -4.06055   AGCAGCCCTTGGGAA               ACAATC CCT GATTGA               TTTAGTTTCAACCAT  58 15
        csrA 1606006 .. 1606026 + -15.5  -5.26119   TCATGGCTGCCTGAA            GGCGACATC CCG GATGTCGCC            TTTTGTTTTTCAGGG 100 47
 JC965_07885 NONE
 JC965_07890 1606424 .. 1606441 +  -8.5  -5.75599   TCGGCACTAAAGAAG             GCTTACT GTTG AGTAAGC              TTTTTTTATCGTTTG 100 79
 JC965_07895 NONE
 JC965_07900 NONE
 JC965_07905 NONE
 JC965_07910 1606858 .. 1606881 + -14.6  -5.60993   GGCGCACCATACAGA          CAGCCTCGAC GTCA GTCGGGGCTG           TTTTTTTATGGGCGA 100 32
        lptF 1616689 .. 1616703 +  -6.4  -3.36878   CAACCTGGGAGTCTC               TGCTGA TGT TCGGCA               TTCTCGATAGATACA  54 46
        lptG 1617870 .. 1617887 + -12.7  -4.87291   TCTGGTCAACAAAAA             GGGCACC TCGG GGTGCCC              TTTTTCGTTGCCGTC 100 131
 JC965_07960 1618665 .. 1618694 + -15.1   -4.9218   TTTAGAATTCAATGA       CTTAAGGCCACCC AAGC GGGTCGCCTTAAG        TTTTTATGCTACCTA 100 41
 JC965_08110 NONE
 JC965_08115 1642909 .. 1642927 + -10.2     -6.13   TGGTTTCACATTAAA             GCCCCCTC ACC GAGTGGGC             TTTTTTTTTGCCTCT 100 86
 JC965_08205 1651868 .. 1651881 +  -3.8  -2.80988   CGAGCGATTAAAGCG               GCCA AACCAC TGGC                TAATTGCTCATGTAA  43 43
 JC965_08210 1652540 .. 1652578 +  -4.5  -3.25073   GCCGAGGCTCAATGA  CAGCATCAGCACCCGACG GCAG TGGTGGGTGATGG-GCTG   TATTCCTCTTCCAGG  49 26
 JC965_08215 NONE
 JC965_08220 NONE
 JC965_08225 1654775 .. 1654796 +  -2.1   -4.2142   GCAATACGTGTCGGT           TCGAGTCCG ACCC CGGGCACCA            TTCTTTTCCCCTGTT  60 126
 JC965_08230 1655975 .. 1656002 + -21.4  -5.05113   AACATGTTAGCTTGA        GCCCCTCGCATC TATG GATGCGAGGGGC         TTTTGTTTGTCTGGG 100 71
 JC965_08235 1656651 .. 1656664 +  -3.7  -3.93664   GGGTGCTCCACCTTG               GCCCG GATG CTGGC                TTTCATGTATTCGAT  58 226
 JC965_08245 1657805 .. 1657817 +  -6.2  -3.52877   ATTTTCAGTGCTTGA                CGGC GATCG GCCG                TTCTGATCTATTACT  56 26
 JC965_08250 1659580 .. 1659598 +   -16  -4.81083   CACCAGATGCAAAAA             GGCCGGTC ATT GACCGGCC             TTTTTCATGCTTCCC 100 138
 JC965_08275 1663710 .. 1663734 +  -3.5  -4.63218   GCTGCGTGTTTTCAT          TGTGCCTCTCC TTC GTAGAGGTAAA          TTTTCTTGGGCGACA  69 324
        istA NONE
        istB NONE
        rpsT 1681278 .. 1681292 +  -8.5  -5.64421   TGAAAGCTGAAAAAA               CCGGC CTAGT GCCGG               TTTTTTATTTGGGGT  95 55
        mutH 1690352 .. 1690363 +    -3  -2.86449   CTCCCCCTTTGATCC                TGTT TATC AACA                 TCCTTGTCATAAAGT  41 29
 JC965_08415 1690792 .. 1690810 +   -16  -4.20531   AGCGGATACAAAAAA             GGCTCGCC ATT GGCGAGCC             TTTTCACTACCTGTC 100 56
        ccsA NONE
 JC965_08450 1696785 .. 1696801 + -13.7  -5.30616   CGAGGATTGAAAAAA              GGCTGCC AAT GGCAGCC              TTTTTGTTTCACTCG 100 31
        hmpA 1698608 .. 1698639 + -18.2  -2.62184   GACCGGGAGAATGCA      CAAGGCCCAC-AAGC ACA GCTTCGTGGGCCTTG      TAATATCAAAGCGGG  86 51
        argR 1704345 .. 1704377 + -14.4  -4.09685   GCCTTGGGCGATCCG     CACAAAAATCCCGGC CTTG GCCGGGATTTTT-TG      TTTTGAGCGGTCGGC 100 48
        arfB NONE
 JC965_08530 1711294 .. 1711308 +  -5.6  -2.73364   GCTTCACACTTGGAT               GGGACG GCT CATCCC               TCATTCAGGTGGCAC  47 469
        gltB NONE
 JC965_08595 1731364 .. 1731385 + -17.3  -5.64274   ACGCTGTCATGCAAA           CAGCCCCGC TCGT GCGGGGCTG            TTTTTTTATGCCTGG 100 56
 JC965_08605 1732698 .. 1732713 + -11.8  -3.36694   CCTCCGTCAAAAAAA              GGGGCC ATCC GGCCCC               TGTTTGCAACTCAAT  77 473
 JC965_08635 1738465 .. 1738475 +  -3.2  -3.30635   TGACATTTCCAGGGA                 CAGG GAG CTTG                 TTATGGCCAAATTTC  46 230
 JC965_08640 1739104 .. 1739116 +  -4.8  -2.87931   CCCCATCGAGACCCA                TCCC TGACC GGGA                TCTGTGAAGGCTAAA  44 19
 JC965_08645 1740022 .. 1740039 + -14.1  -4.63048   GAGGCATAAAACAAA             GGCGGCC AATT GGCCGCC              TTTATTATTTCTGCA 100 60
 JC965_08680 1752213 .. 1752233 +  -8.9  -4.26903   CTCAGGGGCCGGCCG            GCTGGCGGC CCC GCCATCAGC            TTTTCATCCCGTCGG  79 49
 JC965_08685 1752898 .. 1752908 +  -8.2  -3.19192   TTGCCTGATCAGGCG                 GGGG CGC CCCC                 TTCAGTTCAATAAAC  60 33
        rpiA 1753763 .. 1753780 + -14.1  -4.10612   GCCCCAAATGGACAA             CGGCGCC TCAT GGCGCCG              TTTCTGGTTATCCCT 100 101
        serA 1755211 .. 1755229 + -12.4  -5.36441   TCTGCGCAGCAAAAA             GCCCGTCG TGA TGACGGGC             TTTTTTATGTCAGGA 100 51
 JC965_08705 1756884 .. 1756910 + -17.4  -4.54727   CTCAACCAATTCAAA         GAGCCAGGTATC ACG GATGCCTGGCTC         TTTTCATTTCCACAG 100 59
 JC965_08725 NONE
        tapW 1761324 .. 1761341 + -11.3   -4.2349   GGCGGCCACGAAAAA             GGGAACC CTCG GGTTCCC              TTTTGCATATGGACA  89 50
 JC965_08750 1764613 .. 1764624 +  -3.6  -4.66609   CCATCCCGCGCCTTG                CCTC ACCG GGGG                 TTTTTCCCTAGAATG  69 45
 JC965_08755 1765472 .. 1765495 +  -9.4  -4.72272   CCCGGACGTCCTTCA          GGCCCCCTCC TCAC GGCGGTGGCC           TTTTTAGTGCAAAGA  86 93
 JC965_08760 1766547 .. 1766557 +  -3.2  -2.62396   TGCAACAACAACGGA                 GGCA GCA TGTC                 TGATCTCACCCCCTG  40 12
 JC965_08765 NONE
 JC965_08770 1768122 .. 1768134 +  -6.9  -2.52543   AACGTCTGCGCCGGG                TGGCG AAA CGCCG                TGACTTGGCAACACT  50 96
 JC965_08775 1769155 .. 1769179 + -13.6  -3.14132   GCAGCGACAGTCAGG         GGCGG-CAGCG TGCC CGCTGGCCGCC          TTCATCGGGCAGCGC  78 218
 JC965_08785 NONE
 JC965_08790 NONE
 JC965_08795 1772720 .. 1772746 + -12.4  -3.14564   GCCTCAGCCACATCA         CAGGCAGACA TCCTCAT TGTCTGCCTG         TTCATCCCCACATCC  74 71
 JC965_08800 1774385 .. 1774402 + -12.7   -5.7946   TCAGCAAATTGACCA             GAGCGCC TGCG GGCGCTC              TTTTTTTATTCCGAA 100 44
 JC965_08805 NONE
 JC965_08810 1777232 .. 1777262 + -18.5  -3.72576   CACTCCCGCCAGACA       TGACAACGTCCCT CTTGA AGGGACGTTGTCA       TTTCATCAACCCGCA 100 23
 JC965_08820 1779052 .. 1779074 + -14.9   -3.4072   TAGACACAAATGAAA           GAGGGAGGC CTGAA GCCTCCCTC           TTGTCATGCACGGTG  88 84
 JC965_08830 1780878 .. 1780899 +  -3.7  -2.87132   GATCGCCTCCGCCTA           TCTGTGCGAG TTC CTCG-ACTGA           TGTATCACGGGCGCC  43 4
 JC965_08835 1782472 .. 1782490 + -14.6  -5.40072   CATATGGCACTCGAA             TACCCGGC ATC GCCGGGTA             TTTTTTTGCAAAACG 100 59
 JC965_08840 1784194 .. 1784216 + -17.8   -4.1891   TCAGGACAAAAAATC           GAGGGAGGCA TGA TGCCTCCCTC           TTTCTATTGCAAGCC 100 126
 JC965_08855 1788296 .. 1788316 +  -2.6  -3.16564   CACAGGATCCGCTGA            TTGATGAA ATACA TTCAGCAA            TTCATCAAATGAAAG  42 26
 JC965_08860 1789837 .. 1789854 + -12.7  -5.06414   TCGCCCATAAAAAAA             GTCCCCG CATG CGGGGAC              TTTTTATTGGAAGCG 100 69
         map 1810343 .. 1810367 + -17.2  -2.60496   GCCACGTTTGACATT          CAACCCCGGC CGCAC GCCGGGGTTG          CTCTTTACCCGGCCC  86 30
        glnD 1813060 .. 1813073 +  -8.1  -4.66953   ACACGCTCGAATGAA               GCCTC GAAA GAGGC                TTTTTGACGTATTGA  82 40
        dapD 1814071 .. 1814087 + -13.7   -4.7254   CGCCGATGTCATCAA              GGGCACC TCT GGTGCCC              TTTTTCATGCCCACT 100 45
 JC965_08965 1814731 .. 1814746 + -11.8  -4.88407   GTCTGATGCAGCAAA              GGCGCC CAGG GGCGCC               TTTTTCATTGGGTCA 100 45
 JC965_08985 1819577 .. 1819614 +  -3.3  -4.07568   GAGGTGAATTTATTC   TCGGGGAGAAGGGTCTG GCTA CAGTCTATTTTCCCAGG    TTTTCAACCAGGCCA  58 79
 JC965_09005 1822557 .. 1822574 +    -4  -3.09327   GTTCGCTGCCACCTA             GGCCCG GCACGA CGGCCC              TGTTGCCTGGGGTGA  46 25
 JC965_09010 NONE
 JC965_09015 1823305 .. 1823317 +  -4.8  -2.95093   CCTTCGCTCCGCTTT                CCTG ATGGA CAGG                CTTTGATTAAGCTCT  46 112
 JC965_09020 1823863 .. 1823873 +  -2.6  -4.53777   GCCTTATTAACGGAC                 TTTT CTC AAAA                 TTGTTTTTCATTCGA  65 248
         mog 1824533 .. 1824553 + -15.4   -3.8901   GAAGAAATAAGCACT            GGGCGGGG ATTTC CCCCGCCC            TTTGCTCATTTGCGC  95 31
 JC965_09045 1827272 .. 1827289 + -12.7    -4.323   TTCGCGCAATAAAAA             GAGGGCC TGCT GGCCCTC              TTTTGCATCTTTCGC  93 58
 JC965_09100 1841458 .. 1841473 +  -3.2  -4.18018   GTGCTCCCCTGCCCA              GTGC-GG CAG CCAGCGC              TTTTGCATCACCACG  61 479
 JC965_09110 1842436 .. 1842453 + -12.7  -4.90136   CGCCTGATGCGCCAA             GGCCAGC ATAT GCTGGCC              TTTTTGCTGTTCATT 100 45
 JC965_09145 1850676 .. 1850700 + -17.2  -5.31877   GCTCACGACCATACC          GATGCCCCGC CCCGT GCGGGGCATC          TTTTTTGTCCTCCCT 100 45
 JC965_09175 1860777 .. 1860796 + -16.4  -3.53811   ACCAGCAAACCACAA            GCCGGCCC GTTC GGGCCGGC             TTTGCCCAAGGTCCC  93 44
 JC965_09180 NONE
 JC965_09185 1863000 .. 1863011 +  -2.2  -3.56727   CCGCAGCCTAAGGAG                TCAC CCAT GTGG                 TTCTGGTTGATTGAA  48 30
 JC965_09190 NONE
 JC965_09195 NONE
 JC965_09200 NONE
 JC965_09205 1866010 .. 1866029 + -11.4  -5.60993   GCCTTGGTGGCAATT            GGCCGCTC TTCG GAGCGGTC             TTTTTTTATGGCACC 100 129
 JC965_09215 1871946 .. 1871964 +   -16  -5.60993   GATGCCAAGTGCAAA             GCCCGCGA TGA TCGCGGGC             TTTTTTTGTGCCAGG 100 55
 JC965_09255 1877265 .. 1877292 + -16.4  -3.59979   ATAATTTTCATGCTC        CGGACTC-TCCCC CTC GGGGACGAGTCCG        TTTACCATAGGCGGC  95 40
 JC965_09260 1877955 .. 1877971 + -10.8  -3.48924   CCAGAAAAGCGAAAA              CCCGGC GCGAG GCCGGG              TTGTCTGAAGGATGG  72 82
 JC965_09285 1880788 .. 1880803 + -10.4   -2.5937   AGGGCCGCAGGCGAG              CCGCTG ATGG CAGCGG               GTTGTGCCACTCTAT  64 19
 JC965_09290 1881547 .. 1881563 +  -4.3  -3.48276   TAGCTCCGCGTCGGG              TGCCAGC GTA GTCGGCA              TTCTGTCAGGGCCGG  52 38
 JC965_09295 1883616 .. 1883669 +  -2.2  -2.87146   GCGGATTTGATGGCA GTATGGGGCGCG-GCCTTGTCACGG ATATC CCGTGGTGAGGCACCTTCCCCCAGC CTTCTTCTGACAAAG  39 66
 JC965_09300 NONE
 JC965_09305 1884314 .. 1884332 +  -8.1  -3.14211   AGCGGCGCTGGGCAA            GGG-GGGC TAGG GCCCTCCC             TTCATGGGAAGGGCT  60 16
 JC965_09310 1885144 .. 1885154 +  -6.8  -3.14211   CCCTCTCCAGCGTCA                 GCAG TGC CTGC                 TTGATGGGCAGGCCT  53 74
 JC965_09345 1891244 .. 1891276 + -13.3  -4.05033   AGCACTACTGAAAGA      TGCCTCCCTGTGGCC TCA GGCAGCGGGGCGGCA      TTTGTCTGGCGTCAG  95 30
 JC965_09400 1904456 .. 1904470 +   -10  -3.01712   TCTCGATGTCCCGTC               CCATCC CGT GGATGG               TGTTGCAGCCCAGCA  62 147
 JC965_09415 1907571 .. 1907586 +  -6.8  -3.40403   GTGGGAGATGATGTT              GAGGCG CACC CGCTTC               TTGTCCTCGGAGCGG  57 157
 JC965_09425 1910083 .. 1910111 + -17.7  -5.47159   GATGATTTTTAGTGA        TGGACTGAATGAT TAA ATCATTCAGTCCA        TTTTTTATATTGCGC 100 51
 JC965_09435 1911599 .. 1911611 +  -5.5  -2.70854   TTCTTGCCTTAATAA                CCGGT ATT ACTGG                GGTTTTATTTAAAAT  46 69
 JC965_09440 1912768 .. 1912789 +  -8.7  -3.14234   GCCATTCAAATTCAA           TTCGGGAGT TTCT GCTCCCGGA            TCTGTTAAGTTAATC  63 80
 JC965_09445 1914012 .. 1914023 +  -4.4    -2.914   CAAAGCCTACGCGCC                CCAA TCCC TTGG                 CTTTGATCTGGTCCA  46 162
 JC965_09460 1919426 .. 1919436 +  -3.2  -3.14132   AGCAGAAATATTTTA                 GCAG GAG TTGC                 TTGATGGAAGAACAA  43 11
 JC965_09465 NONE
 JC965_09470 NONE
 JC965_09475 NONE
 JC965_09480 NONE
 JC965_09485 1931533 .. 1931545 +  -3.3  -3.39844   TGGCAGCTGACTGAC                CACGA CCG TCGAG                TATTTCCCATATCGA  49 311
 JC965_09555 1948251 .. 1948267 + -13.7  -5.08255   ATGGTTTGTTACAAA              GGCGGTC ATT GACCGCC              TTTTCTTTTGCAGGT 100 53
 JC965_09560 1948674 .. 1948691 +  -4.1  -4.58685   GTTTGTGTGCTCTCT             GGGGT ATGCTGTC ACCCC              TTTTTGCCACGGTTT  69 68
 JC965_09565 1949272 .. 1949287 + -11.8  -5.19879   GAGTTCAATAAAAAA              GGCGCC TTTC GGCGCC               TTTTTCTATTTCGCG 100 44
        mnmC 1952694 .. 1952710 +  -9.4  -5.88197   GACACACCAAAAAAA              CGGGCT CAATC AGCCCG              TTTTTTTATGTTTCC 100 79
        dcuC 1955049 .. 1955066 + -14.1  -2.62184   CCTGACTCTTTACCG             GCCCGGC TGCC GCCGGGC              TGGTATCCCCCCCAC  78 36
 JC965_09590 1956781 .. 1956811 + -12.5  -2.72144   TCACGGCCAGTGAAT       CTGGCACCGGCCC ATCCC GGGTCGGTGCCGC       CTTTCCCCCGCATAG  73 28
 JC965_09595 1958716 .. 1958738 + -14.9  -4.51174   ATCAGGCACACAGAA           GGGGCCATC CTGGT GATGGCCCC           TTTTCGTTGTCGTCA 100 40
 JC965_09600 1959410 .. 1959427 +  -6.9   -2.5474   GGGCACTGGTTGCTC             CCGGGGC TGAT GCTCTGG              CTCTTCTCACTGCCG  50 100
 JC965_09605 1960278 .. 1960298 + -16.9  -4.08064   ACCCCATCAACGCAA            CACGCAGCC CAT GGCTGCGTG            TTTTGAAGAGCGGTT 100 135
 JC965_09615 NONE
        rpmJ 1961308 .. 1961324 + -10.1  -4.04318   TCATGGATAACAAAA              GCCCTCG TCA TGAGGGC              TTTGTCATCTCTGGG  79 56
 JC965_09645 NONE
 JC965_09650 NONE
        araA 1970267 .. 1970286 +   -15  -4.07246   CCATCACCATGACAA            CAGCCCCG CCCG CGGGGCTG             TTTCATTTCGCGTCC 100 60
 JC965_09665 NONE
 JC965_09670 1973271 .. 1973295 +  -4.8  -2.72511   ACCCATCGCAAGATA          GCCGTCGGCC CTTGA GGCCGGCACC          CTTTAGCACGCTAGG  43 11
 JC965_09675 1974149 .. 1974182 + -21.1  -4.09243   AGTTGCAAGGGGCCA     CGGCAACAGGGCGGCC ATT GGCCGCCCTGT-GTCG     TTTTCCCAGCCTCTC 100 65
 JC965_09690 1978487 .. 1978503 +  -3.6  -2.92613   CGAACGCCCCGGACT              TCGCTC TGCCT GCGCGA              TGGTTTACCATGCAG  44 101
        sbcB 1980124 .. 1980138 +  -7.8  -3.66803   TTAGATGCGCTGACG               GCATGG ATG CCGTGC               TTTCGACTGTTGGGG  63 132
 JC965_09700 1980696 .. 1980711 + -10.4  -4.62069   TCGCCACGTAAAAAA              GGCTCC CGAG GGAGCC               TTTTTGCAGTGCAAC  93 49
 JC965_09715 NONE
 JC965_09720 NONE
 JC965_09725 1987422 .. 1987449 +    -9  -3.13403   TTCTTCAAAGAAAGC        GTGCCAGACGCC CAGT GGCGGCTGGCGG         TATTCCTCAACCAGG  63 97
 JC965_09750 1991949 .. 1991971 +  -7.7  -2.96598   CCCGAGGTGGATTTC          GCCAGC-CTG TGAG CGGCGCTGGC           TATCTCCCTTAGTTG  56 14
 JC965_09755 1992986 .. 1992996 +  -4.6  -3.14132   GACTCATGGCCGCAG                 CGGG CAC CCTG                 TTCGTCAACACCACG  48 112
 JC965_09765 1993674 .. 1993696 + -13.5  -4.12397   CTGTGTGACAAGCAA           GAAGGAGCC CATGA GGCTCCTTC           TTTGTCATTGTGTGC  95 57
        norR 2004474 .. 2004501 +   -20  -3.71848   AGGGGCCCAAAAACA        GAAACCCCCTCG CTGG CGAGGGGGTTTC         TTGTTCATGGCACCC 100 57
 JC965_09820 2007095 .. 2007120 +  -8.9  -4.41348   TCAAATAATCTGCCG         GTCGGGGTGAC GTGA GTCACCCCTCC          TTTCTTTGCGGGCAA  81 33
        livH 2008094 .. 2008107 +  -4.5  -2.77523   GAAAAACCAATCTAT               GCATG CCCT CGTGC                TGCTGTTCATGACCA  44 39
 JC965_09830 NONE
        livG NONE
 JC965_09840 NONE
 JC965_09845 2012097 .. 2012116 +    -7  -3.15544   GCCCCGTACCAGAAA            GCGGGGGG TACG CCCTCCAC             TTCCTCCACCTCGCC  53 281
        glpE NONE
        glpG 2014135 .. 2014154 + -16.4   -5.1356   TTTGCCATAAAAAAA            CGCCGCCC CAAG GGGCGGCG             TTTTTATTGGTCGGC 100 397
 JC965_09870 2017175 .. 2017204 + -15.9  -4.82901   ACCCGCCGTAGATAG       C-ACAAACCCCAGC CAG GCTGGGGTTTGTCG       TTTTTATGGGGACAA 100 50
        rhlB NONE
        gppA NONE
 JC965_09910 2025744 .. 2025778 + -18.1  -3.57263   GCAGCCAATGAATAG    C-AAGAGGGCCAACCT GATC AGGTTGGCCCTCTTCG     TTTGACGCTCAAACT 100 30
 JC965_09995 2043256 .. 2043271 +  -4.8  -3.05816   CCGCATCCGCATTTT              TTATAC GGTC GTATAA               TTGCGTACAAAATGC  47 233
 JC965_10000 2043990 .. 2044000 +  -2.4  -2.71011   TGCTGGCCGTTCTCG                 GTGG TTA CCTC                 TGGTTGCAGAGCCAT  38 68
        hlyD NONE
 JC965_10010 NONE
 JC965_10015 NONE
 JC965_10020 2048987 .. 2049015 +   -16  -4.58395   ACCTTGTTCAGCTGA        TGCCGGTCTCGC CCAGT GCGAGACCGGCC        TTTTTCCGACATAAG 100 47
 JC965_10025 NONE
        nirD 2052225 .. 2052244 + -12.8  -3.01712   GTTAAAAAACAGTCA            GGGCTGCC CGCG GGCGGCCC             TCTTGAAGGAAACAA  75 125
        nirC 2053082 .. 2053092 +  -2.4  -2.73735   CCGCCTGATCAGGAG                 GCCC CAT GGAC                 TACTTGCCCATCTTT  39 33
        cobA 2054512 .. 2054529 + -12.7  -4.97405   CTGCATCCATTCCAA             CGCCACC CTCA GGTGGCG              TTTCTTTTTCTGCAT 100 44
        mgtE 2056070 .. 2056096 +  -9.4  -3.53012   CGAGGCTGACCGTCT        GCGGCGCCTGC CATGGC GCGGG-GCCGC         TTTCGCGCAAAAACG  66 45
        rraA 2056708 .. 2056725 + -11.3  -5.24531   AGCGCTGAGTGATAA             TGGGAGC CCTG GCTCCCA              TTTTTTATGCCCGCT 100 43
 JC965_10070 2059919 .. 2059938 +  -7.8  -3.71174   CCTGAAATAATGCAT            GGCGCC GACCAACG GGCGCC             TTTCCACTGTTTGTT  67 31
 JC965_10080 2062499 .. 2062513 +  -2.2  -3.62775   GCGCTTCTAAGCTGA               TTTTAA TCA TTAGAA               TTCTTACCCCCTCCT  48 63
 JC965_10085 2063210 .. 2063229 +   -15   -4.4078   CAGACTCCACCAGTG            GGGCCACC GAGC GGTGGCCC             TTTTAGTTGGGCAAA 100 123
 JC965_10135 2073616 .. 2073638 + -11.9  -3.53012   ATGCCCGAAGATGAC           GCGGCCGGG TGATC CCCGGCCCC           TTTCACAGCAAGAGC  78 89
 JC965_10140 NONE
 JC965_10145 NONE
 JC965_10150 2075763 .. 2075776 +  -3.1  -3.80515   AGCACCACTTATCCC               GTGAT GACG GTCAC                TATTTGTTGTAATTT  53 44
 JC965_10155 2076874 .. 2076890 +  -5.7  -5.24129   AGACCCGGCGGCATC              GGGTAGG CTA CCAGCCC              TTTTTTGTACAGGAG  89 88
        yegD 2078406 .. 2078451 +  -9.6  -3.05596   CCTCGCCCTGCCGCC TGGGC-CCGGGGACGGGTATG CTTGT CATACCCACCACCGGAGCCCC TTCAATGCCCAGATA  66 154
 JC965_10165 NONE
 JC965_10170 2079861 .. 2079885 +  -2.8  -3.72893   AGCTCGAACACCTGC         ACGAGCA-GGGC AAC GCCCTTGC-CGA         TTTGCTGACCCAATA  53 94
        malZ 2081887 .. 2081905 + -13.8  -5.64274   AGCGGCAATAGAAAA             CCGGCGCT CGG GGCGCCGG             TTTTTTTATGCCTGC 100 45
        trmA NONE
        rstA NONE
        rstB 2087612 .. 2087626 +  -5.7  -2.78384   CCTAGGATGAAGTCA               TGGAG AAACG CTCCA               TGTCATCAAACCGAA  49 36
 JC965_10210 2087858 .. 2087889 + -14.4  -4.59853   CCCGCTTCCACCATG      AAAAAGGGGCCCCC GACA GGGGGCCCCTTCTG       TTTTTGCGCGCTTGC 100 45
        rnhA 2093896 .. 2093921 +  -2.4  -2.57931   ATGAAAGGCAGATAG         TGGCCCAGCC CCACCA GGCTGAGCGG          GTTGTAACCACTGAC  38 342
        gloB 2095169 .. 2095181 + -10.5   -3.4072   CAAACCTTGATCAGG                GGGGC ATT GCCCC                TTATGATGCGAGCTG  72 42
 JC965_10255 2096786 .. 2096806 + -12.6  -5.72616   TCGCAATCCAAAAAA            TACCCCGC TTGAT GCGGGGTA            TTTTTTTGTCTGCAT 100 48
 JC965_10265 2098104 .. 2098130 +  -3.7  -3.44146   CACATAGGTGAAGAC        GCCC-TCGGTCAC GCA GT-ACCGCTGGGC        TTCGTTCTCCCGCAA  51 89
        raiA 2106092 .. 2106107 + -11.8  -4.78149   ACTCATAAAGCAAAA              GGCGGG TTAT CCCGCC               TTTTTGCATTCTACC 100 52
 JC965_10305 NONE
 JC965_10310 2106981 .. 2106997 + -10.8   -4.4595   CCATCTTTCAGAGAA              CCCGGC CTTGT GCCGGG              TTTTCGCTTTTCTGC  88 38
 JC965_10325 2113734 .. 2113764 +  -5.4  -3.59979   CCGAGGGGCTGACGT       GGAGGCGCAA TTGCAGTAATC TTGCGCCCCC       TTTCCCCTCGCCGAG  56 29
 JC965_10330 NONE
 JC965_10335 NONE
 JC965_10340 NONE
 JC965_10345 NONE
 JC965_10350 NONE
 JC965_10355 NONE
 JC965_10360 2121121 .. 2121131 +  -2.4  -4.00042   AGTCACCCCAGAAGA                 GGAG CAC CACC                 TTGTTTGATCGCCAC  54 7
 JC965_10365 2121746 .. 2121782 +  -3.4  -2.79831   CTGACGGGATCCCGG    GGGCGCGCCGGCACGG AGCAC TTGCGCCTGCACGCCA    ATGTTTTACCATGAC  41 37
        mltB 2122949 .. 2122964 + -11.8  -6.15536   CAATACCAACGAAAA              CGGGCC CGCA GGCCCG               TTTTTTTTATTCGTT 100 49
 JC965_10380 2124456 .. 2124476 + -12.6  -3.62418   CCCGACACAAAAAAA            GAGGAGCC ACCAG GGCTCCTC            TTTCACATGGGTTGT  81 52
 JC965_10395 2127777 .. 2127787 +    -4  -2.66316   GGCGGTTAACAGTTT                 CAAA TCC TTTG                 TGATATAGTGCGCCC  42 32
 JC965_10400 NONE
        ybfE NONE
        fldA 2128956 .. 2128978 + -19.2  -3.12351   TCCCTCTTCATGCAA           CAAGGGCCCC GAC GGGGCCCTTG           TTGCATCTGCAGCAG  95 52
         fur 2130158 .. 2130174 + -12.3  -5.36441   CGGCGCAATAAAAAA              GCCAGCA TGA TGCTGGC              TTTTTTGTGTCCGCA 100 52
        nagB NONE
        nagA NONE
 JC965_10450 2139943 .. 2139961 +   -16  -5.57054   CTTCGGATACGAAAA             CGGCAGCC AGT GGCTGCCG             TTTTTTTAGGTTCTT 100 50
         rrf NONE
 JC965_10465 2140926 .. 2140947 + -15.9  -5.04601   GCCACTAAATTGAAA           GGCCTTCCC TATC GGGAAGGCC            TTTTTGCTTTCTGGC 100 37
 JC965_10475 2143122 .. 2143137 + -11.8  -4.76041   TCACGCTATCGAGAA              GGGCCC TGCG GGGCCC               TTTTTCATGGCTGTG 100 59
        dhaK NONE
        dhaL NONE
 JC965_10490 2145774 .. 2145799 + -16.1  -5.40072   GAAACATTCCCCCAT         CCGGGCCCCGT CACG ACGGGGCCCGC          TTTTTTTGAGGGGCG 100 39
 JC965_10505 NONE
        aguB NONE
 JC965_10515 NONE
 JC965_10520 2153169 .. 2153198 + -23.7   -3.1886   TGGCGGTGTGACGCA       GGACAAGGGGCGC CTCG GCGCCCCTTGTCC        TTGCTGGCGTTCCAT 100 61
 JC965_10540 2157346 .. 2157367 + -14.5  -4.91511   GGGTCAGATAAACAA           CAGGCCATC ATGT GATGGCCTG            TTTTTATGGTGGCAT 100 55
 JC965_10550 2159527 .. 2159543 + -13.7  -5.14163   TACTGCATTGAACAA              CGGAGCC TCG GGCTCCG              TTTTTATTGGTGACT 100 233
 JC965_10560 NONE
 JC965_10565 2163093 .. 2163124 + -21.8  -3.53811   CTAGGCAGGCGGCAA      TAAAACGAGGCGCC CAAG GGCGCCTCGTTTTA       TTTGGGACCAATGAC 100 37
 JC965_10580 2166304 .. 2166325 + -14.5  -3.34013   GGCATGTTGAGCAAA           GAAGAGGCC TGAG GGCCTCTTC            TTCATTGCGCGGATC  83 14
 JC965_10615 2172645 .. 2172681 +    -8  -3.42503   CGGCGTTCTGGCGAC   CTGA-CATGGCGGATCC CGCA GGATCCACCGGGATCAG    TTGTCGATGTTGGGG  64 41
 JC965_10630 NONE
 JC965_10635 2176134 .. 2176146 +  -2.7   -4.1721   TGGCGAAATGAATGA                GTTAA CAA TTAGC                TTTTACACTGTAAAT  58 52
 JC965_10640 2176618 .. 2176636 +   -16  -5.24531   TTCCAACGCCTTTTG             GCCGGTGC CCT GCACCGGC             TTTTTTGTGCCCGCT 100 60
        recC NONE
        recB NONE
        recD 2185852 .. 2185882 +  -4.7  -3.40867   AGGTTGGGGGAGTGA       TTGATGGCGGC GTGAGGGGA GTCGCCGTCAG       TTCATTAATCCGTAG  52 26
 JC965_10660 2186550 .. 2186588 +    -2  -3.97636   CACCTTCCCTAGATA  TA-TTTCCAGAGTCGATA GTTGA TGTCGG-TCTGGAAACTA  TTTATGAGTTGGAGT  54 68
 JC965_10665 2187029 .. 2187051 + -10.6  -3.95036   ATCTAGTTATCACCT           GACACCGG CCTCAAA CCGGTGTC           TTGTTTACGCTACTT  79 116
        grcA 2189050 .. 2189065 + -11.8   -5.1675   AAAGAGATAAAAAAA              CGGCCC CCTC GGGCCG               TTTTTTCATGGGTGA 100 53
        lolB NONE
        ispE NONE
 JC965_10725 2197777 .. 2197807 +  -5.5  -3.02829   TCTCCTTGTTGAGGC      CGTATCGG-GAGGT GTTG ACCTCGTCGATGTG       TCTTGGGCCAATCTG  48 45
 JC965_10730 2198960 .. 2198985 + -16.3  -5.47821   TAGACCCTGTTGTGA         CAAAAACCGCC GAAT GGCGGTTTTTG          TTTTTTTGGGTGCCT 100 41
         pth NONE
        ychF 2201023 .. 2201044 + -15.9  -5.36441   CGTCTAACCCCATGA           GAGGCCAGC ATTT GCTGGCCTC            TTTTTTATCTGGCCA 100 34
 JC965_10745 NONE
 JC965_10750 2201418 .. 2201448 +    -4  -3.07962   CCAGCCATTTTTTGA       ATGATGTTTGATGG TCT CTGTCAGGCATCAC       TGTTGGGGTATCGCC  46 34
 JC965_10755 2201525 .. 2201537 +  -2.7  -2.69207   TCCTAGTACCCCAGC                CATTT TTT GAATG                ATGTTTGATGGTCTC  40 24
 JC965_10760 NONE
 JC965_10765 2201760 .. 2201772 +  -2.7  -3.38316   CCGTCATAGCCACCA                TGTTT GAA AAACG                TTCCTTCAATCATCC  48 26
 JC965_10770 NONE
 JC965_10775 NONE
 JC965_10780 2202107 .. 2202120 +  -8.1  -5.71712   GCAGTACCAAACAGA               CCAGC TCAG GCTGG                TTTTTTTGTATCCGG 100 47
 JC965_10790 2204818 .. 2204845 +   -10  -2.50074   CGGGCCAAAAGCGCA        CAATGACTGTTT TTAT ATACAGTCATTG         GTGTCTTATGGAAAA  62 78
 JC965_10795 2205782 .. 2205795 +  -5.2  -3.05819   ACTCTGAGTTGGAAC               CGGC CCCCAA GCCG                TGTTAAAAGTGTCTC  50 34
 JC965_10800 2206282 .. 2206305 + -18.2  -4.05033   GCCTGATCCCATGAA          GAGGGCTCCC CGCG GGGAGCCCTC           TTTGTATCCGATAGC 100 86
 JC965_10810 2208917 .. 2208932 + -11.8  -4.25256   AAATCCATAAAAAAA              CGCCCC AGGC GGGGCG               TTGTTTTCATGGCGG  90 463
 JC965_10910 2229832 .. 2229861 + -20.9  -3.57144   TCCCCCTGGAAACAA       CAAAAACCGGCGC CCAG GCGCCGGTTTTTG        TTTCGGGATGACGAG 100 42
 JC965_10930 2233554 .. 2233585 + -13.9  -4.79667   GGGGCCTCGCGGCCC      TAATGCCAGTCAG TTAAGC CTGACTGGCATTG       TTTTTACTAGGTTTT 100 63
 JC965_10950 2236685 .. 2236701 + -13.7  -5.24129   GCAATCACAGCAAAA              GAGGGCC CTT GGCCCTC              TTTTTTCTGGCGCGA 100 50
 JC965_10955 2237970 .. 2238002 +   -17  -3.66288   GCGCCGAACCTCTTC      CAGGGCGGGCCCTC CAACA GGGGGCTCGCCTTG      TTGTCTTGCCAAGTG 100 49
 JC965_10960 2239101 .. 2239124 + -13.8  -2.53581   CCAACGATGGCACAA          AGAGGCCCGC CATG GCGGGCCTCC           TGCATTCAAGGTGTG  75 48
 JC965_10970 2241161 .. 2241186 + -14.7  -4.07246   AGCCTTCAACCTGCA         CGGGCCCCCTT GGCA AAAGGGGCCCG          TTTCGTTTAACGTAA 100 63
 JC965_10975 2241664 .. 2241683 + -10.6  -2.62263   TGACCCTCTCTCTTC            AGGCGGCC GGAC GGCCGCCA             TCCTCTGGCGCAACT  64 56
        asnB 2243523 .. 2243546 + -15.4  -4.32669   CCCCTGACCTGAATA          CAAAGCCCCT CTCG AGGGGCTTTG           TTGTTTTCTGCCATT 100 44
 JC965_10985 NONE
 JC965_10990 2245002 .. 2245015 +  -5.9  -2.70932   CTGCACAGCTTCAGG               GCTGG GCAT CCGGC                TGATTGGCGGGGGCG  48 103
        prpB 2255168 .. 2255181 +  -5.2   -3.4072   ACCAAGGAATAAGAC               GGCG ACCGGC CGCC                TTATGCTGGCGGCTG  54 29
        prpC NONE
        acnD 2259052 .. 2259072 + -16.9  -3.05384   GGAAGGCATAAGGCA            CCCTCTCCC TTT GGGAGAGGG            TTGGGTGAGGGAACA  88 73
        prpF 2260411 .. 2260438 + -11.2  -5.18561   CCAGCCAGACGAAAA        GAGCCCCAAGGC GACT GCCTCAGGGCTC         TTTTTTGGATGTTTC 100 67
 JC965_11070 NONE
 JC965_11075 2266082 .. 2266097 + -11.8  -5.06414   TTAAGATGCACAAGA              CCCCGC TTCG GCGGGG               TTTTTATTGGCGCCC 100 48
        yccS NONE
 JC965_11085 2268996 .. 2269026 + -17.7  -4.59376   TTGGACACAAAAAAA      GACCGCGCC-CATG TTGC CATGAGGCGCGGTC       TTTTCATTTCATCGT 100 89
 JC965_11125 2278958 .. 2278989 + -13.9  -4.79667   ACGGGCACCTGGGTG      TAATGCCAGTCAG TTAAGC CTGACTGGCATTG       TTTTTACTAGGTTTT 100 54
 JC965_11140 NONE
 JC965_11145 2281627 .. 2281638 +  -7.2  -3.91897   CGCCCGTTTGCTCTC                CCCG CTGG CGGG                 TTTGTCGGTCACCGG  68 208
 JC965_11160 2286127 .. 2286145 + -17.4   -5.4833   ACAGTACAACCAACA             GCCGCCCC AAC GGGGCGGC             TTTTTTATTGACTCG 100 52
 JC965_11170 2290995 .. 2291039 +   -12  -3.09834   CAGGATCAGGGGAGC GAGCCTCCCCGCTGACGCCC GCCAG GGGCGTCAGTCGGTAGACAC TTCGATGGTCAGGTG  74 11
 JC965_11180 2292813 .. 2292843 +    -4  -3.40403   GGTGCTGAGCCCCAC      GCTGGCACGACGA TGGGTC TCGTTGA-CCAGC       TTGTAGTAGCCGCCC  51 525
 JC965_11220 2305647 .. 2305664 + -14.1  -4.61873   GGGCTAAGCCCGCAA             GCCCCGC TCAG GCGGGGC              TTTTCGTTTGTCCCC 100 34
 JC965_11225 2306709 .. 2306721 +  -4.7  -2.71364   ACCCAGCTCGGTGAT                GCGGG CGG CCCCC                TGCTTGCGCACCTGA  44 105
 JC965_11265 2315510 .. 2315536 + -16.6    -2.914   ACTGAGTGGCCCCAT         GAGCCCCTGCCA GGC TTGCAGGGGCTC         CTTTCCTGTCATGGC  87 36
        gbpA 2317367 .. 2317387 + -18.3  -4.84527   TCAACATCAAACAAA            CGGGGAGCC CAT GGCTCCCCG            TTTTTCATCTATCCC 100 96
 JC965_11335 NONE
 JC965_11340 2329617 .. 2329635 +   -16  -4.41494   CTTGCCGCCGCCCAA             GCCGGAGC CCA GCTCCGGC             TTTTCATTGCGCGTC 100 73
 JC965_11345 2330590 .. 2330619 + -13.5  -2.53263   TTCACCGGGCAAAAA       AATGCCCCGCCCC CGTG GGGGCAGGGCATC        TGCATTCACCCTGCA  75 54
        tapT 2334695 .. 2334706 +  -4.4  -2.56271   ACACCCAAGGAGTCG                CCAT GAAC ATGG                 ATGTTCTGCTCGCCG  43 47
 JC965_11380 2335834 .. 2335844 +  -3.2  -2.75769   ACCGCTAGTAAAGGA                 CAGT TAT GCTG                 ATTGTGGTTTCCCCG  41 53
        yaaA 2336690 .. 2336709 + -11.4  -5.24129   AAGCACTTTTTGTTG            GCCGACGT CCTT GCGTCGGC             TTTTTTCTGCGCCCC 100 103
 JC965_11395 NONE
        brnQ 2340378 .. 2340399 + -15.9   -5.5112   TCTTGACCAAATAAA           GAGGCCAGC ATTC GCTGGCCTC            TTTTTTGTTGGTGCA 100 48
        dusA 2342685 .. 2342710 +  -3.9  -2.63631   CCAAGGTGCCGGAGT         TCGCGCCGGCCG ACG CGG-TGGAGTGA         TCATGTACCGCTTCA  42 0
 JC965_11425 2342889 .. 2342908 + -16.4  -5.24129   CCCGAACAAGAAAAA            GCCGGCGC CCCT GCGCCGGC             TTTTTTGTCACCACG 100 52
 JC965_11440 2344569 .. 2344596 +  -4.2  -3.14468   TCCCTCAGCCATCAG        CAGG-TCTGATAT TCA ATATCGGAGCCAG        TTCAATATCCTGGCG  47 17
 JC965_11445 2345087 .. 2345104 + -11.3  -4.77438   CGGGCAGAAAAAAAA             GGAGCGT CCAT ACGCTCC              TTTTTCATGGTCGGT 100 46
 JC965_11455 2348987 .. 2349004 + -12.7   -5.4251   GGAGACAACAAAAAA             CGGGCAC GCAA GTGCCCG              TTTTTTGTCTATCAG 100 53
 JC965_11470 NONE
 JC965_11475 2354102 .. 2354124 + -10.5   -4.1552   AGCCCCCCAAAGCAA           CGGGGAAGC CTCAT GCCTCCCCG           TTTCTTGACCCACTC  81 50
        tppF 2363030 .. 2363049 + -12.1   -3.3514   CTTCATCATGGCGTA            CCGGCGC GCAGCA GCGCCGG             TTCTCCGGTGTGAGT  72 71
 JC965_11545 2368023 .. 2368048 +  -3.9  -2.62983   CAGTTGGATATCACT         ACCTGGCCGCTC TGT GAGCG-CTGGGA         TGATGTCACCCTGGA  42 306
 JC965_11580 2373164 .. 2373174 +  -4.6  -3.08344   CCGTCAGCCAAGCAG                 CCGG GCA CTGG                 TATATCTCCTTTCAG  47 125
 JC965_11585 NONE
 JC965_11590 2373986 .. 2373996 +  -2.4  -3.48276   CGAATAATAACCATA                 CGGC CTT GCGG                 TTGTCTAAAGGCACC  46 104
        rsxA NONE
        rsxB NONE
        rsxC NONE
        rsxD 2378746 .. 2378758 +  -3.3  -3.02144   CCACAGACGCGAGAC                AGGGA GCC TCCCA                TGTTGAAAAGCATGC  42 57
        rsxG NONE
 JC965_11620 NONE
         nth 2380807 .. 2380854 +  -9.8  -2.52543   TACAAAGAGAAGGTC TATCCCGAGAGTTGATCTGCAG GCCT CTGCGGATCCGGTCTCGGGCAA TGGATTCAAGGCAGT  62 11
        gloA 2381337 .. 2381353 + -15.1  -4.43477   CGGTGAGAAAAACAA              CGGGGCC CAG GGCCCCG              TTTTCATTGGCTGCG 100 56
 JC965_11640 NONE
 JC965_11645 2385158 .. 2385175 +  -6.9    -4.371   CGCGCCATCGCAATG             CTCGGCG CCAC CGCCAAG              TTTTGCTATCATCCA  74 50
        mtnN 2385908 .. 2385921 +  -3.1  -2.78384   CGAAGTGATCATCGC               GC-TGC TCG GCAAGC               TGTGATCGACGCCCC  41 7
 JC965_11655 NONE
 JC965_11660 2387764 .. 2387776 +  -6.3   -4.2349   ATATCGTGGGTTATG                GCATA AAA TATGC                TTTTGAATCTAACAG  69 72
        pseB NONE
        pseC NONE
 JC965_11675 NONE
 JC965_11680 NONE
 JC965_11685 NONE
        pseG NONE
        pseH NONE
        pseI NONE
 JC965_11705 2396293 .. 2396312 +   -15  -5.38326   CAAGGGATAGAAAAA            CACCGGCC CAAG GGCCGGTG             TTTTTATTTGCTTAA 100 31
 JC965_11750 2405934 .. 2405959 +  -2.5  -4.75289   AGAGTCGCACTCCTG         GCCAGGTTGCGT TGA AC-CAAGCAGGC         TTTTCTGTTGTCATA  69 57
 JC965_11755 2406428 .. 2406445 +  -8.4    -5.252   GAGTGAAATAAAAAA             TCCGGC GCCTTG GCCGGA              TTTTTTATACGCGTC  93 57
 JC965_11765 2409078 .. 2409109 + -20.3  -2.53271   GAATCGACAATCAAC      TGACGGCATCGGG ACCACC CCCGATGCCGTCA       ATATTCTGGCGCTCA 100 59
 JC965_11790 2417627 .. 2417640 +  -4.5  -2.68072   TCAGGACTGACACAA               GGCTG TCAG TAGCC                CTTCGTTATGCTGGG  43 31
 JC965_11795 2418061 .. 2418077 + -15.1  -4.63218   AATCATGAAATGAAA              CGGGCCC ACA GGGCCCG              TTTTGTTGAACAGAA 100 78
 JC965_11855 2433484 .. 2433498 +    -2  -3.04398   GCTTTTTCCGCGCTT               TTGGCA TAA TGCCCG               CTTTTGCAACGGGAC  41 57
 JC965_11860 2435438 .. 2435450 +  -4.7  -2.70932   CACGGGAGTGAGTCC                GCCGC GCC GGGGC                TGATTGCCCCCGGCC  43 30
        tsaB 2436242 .. 2436256 +    -7  -3.86346   GAATAGGCGGCAACG               GCTGCC CCG GGCTGC               TTTATCGGACGATGA  63 35
 JC965_11870 NONE
 JC965_11875 2437824 .. 2437837 +  -2.3  -2.57132   GAGGCAACACAGTGA               GCGCA CAGG TGCGA                GTTATGCAGGAGAAG  38 190
        fadD 2439577 .. 2439593 + -10.1  -5.72622   TGTCGTTATGCAAAA              CCGTGGG ACA TCCACGG              TTTTTTCTTTCTGGA 100 70
         rnd 2440763 .. 2440781 + -14.6  -4.76041   TACGCAGTACGAGAA             GGGGAGTC CAT GACTCCCC             TTTTTCATGCCTGTG 100 45
 JC965_11910 2444812 .. 2444837 +    -9  -5.06414   TAATGCTATGGAGTT         GGCTCGTCAT TTTTGC GTGACGGGCC          TTTTTATTGCCCCCA  91 63
         apt 2445501 .. 2445522 + -13.7  -3.66178   GCTTTCTGCCGCAAA           CCGGTGCCT GAAC GGGCACCGG            TTTGAAATTCAAGCG  84 74
        dnaX 2448125 .. 2448135 +  -2.4  -3.87869   AATTGCGGTGAAAAA                 ACCG TGC CGGG                 TTTGTCCCCGGTTGA  54 40
 JC965_11925 2448614 .. 2448634 + -16.9   -4.2349   AGGGGAAAATGAAAA            GGCCAGAGC CAA GCTCTGGCC            TTTTGCATGTCAGCA 100 76
 JC965_11935 2450618 .. 2450639 + -14.5  -5.60993   CAATTCTGATAAAAA           CAAAGCGCC TGAT GGCGCTTTG            TTTTTTTATGGGCCC 100 43
 JC965_11945 2453507 .. 2453523 + -13.7  -2.70932   TAGTGCCCGGCTCTT              GCCTCCC CTC GGGAGGC              TCGTTGGGGGAAAGC  75 74
 JC965_11950 2453990 .. 2454009 + -13.6   -4.2828   CTGGTTGTTTTCAAA            GAGCAGGC TCCG GCCTGCTC             TTTTCATCCGTGACG  95 51
        hrpA 2458170 .. 2458183 +  -3.7  -4.25458   TTGGGGGTGGCACCA               GGGCG GGAT CGCAC                TTTGTTAATGAAATT  63 127
 JC965_12210 2506074 .. 2506084 +  -4.6  -4.07568   ATCGCGCCCGCCAGG                 GGGT GCT GCCC                 TTTTGAGCGGCCCCC  61 9
        cmoA NONE
        cmoB NONE
 JC965_12225 NONE
 JC965_12230 NONE
 JC965_12235 2511516 .. 2511531 + -11.8  -5.60993   CCCCTTCTGCAAAAA              CGCGCC CACC GGCGCG               TTTTTTTATGGCCGC 100 47
 JC965_12240 2512728 .. 2512746 +  -3.1  -3.52539   GGCTGCCCCCACAGG             CGGCA ACTCGTCAA TGCCG             TTGTCATTCAGGTTC  48 47
 JC965_12245 2513276 .. 2513305 + -19.5  -3.62597   AGGTGCGACCCCAAA       CATGAAAAGGCCC CTCG GGGCCTTTTCATG        TTGTTGCCGGGTCAG 100 39
 JC965_12255 NONE
 JC965_12260 NONE
 JC965_12265 NONE
 JC965_12270 2517871 .. 2517907 +  -4.4  -3.47227   GGGGATCTGGCTCCC   CTCGGCCGGTTGCAGG CCGATCA CC-GCCACCG-CCGGG   TTCTGCTCCTTGAGG  51 326
 JC965_12280 2519197 .. 2519224 +  -6.2  -4.09864   TGCGCAGCCAGGCCC        GCATGCATCTGC GCCA GCAGGTGCCTCC         TTTTGCCAGCTCGCT  66 334
 JC965_12290 2521401 .. 2521420 +  -3.4  -3.06183   CTGCGACCAGGATTG            CACCCCGC CCCC GCTTGGTG             TTAAATGCCCCTCCA  43 72
 JC965_12295 NONE
 JC965_12300 2523448 .. 2523462 +  -8.5  -5.06414   ACCCGTTTCCAGTCA               GGGGC CTCGC GCCCC               TTTTTGTTGCCCGCC  90 48
 JC965_12305 2523958 .. 2523976 + -13.1  -5.06414   CAACTTATCCTGCCA             GCCCGGC CCGAC GCCGGGC             TTTTTGTTGGCCGCC 100 66
 JC965_12320 2531492 .. 2531511 +   -15  -4.90778   CCCCGGAATGCAAAA            CGGCTGCC CGAG GGCAGCCG             TTTTCTTTAGATAAC 100 65
        bioA 2537864 .. 2537887 + -12.4  -3.61889   GAGTCCGGTTGAACG          GGCCCTGCAT GAGA ACGCAGGGCC           TTTCGGCGCTTTTTC  79 39
 JC965_12355 NONE
        asnS 2540766 .. 2540783 + -12.7    -5.252   CGCGAATCGCATAAA             GCCGACC CCTG GGTCGGC              TTTTTTGTGCCCGTC 100 53
        ilvC 2546767 .. 2546787 + -18.3   -4.3208   GATAGCAATAAAAAA            GCCCCGCTC ATC GAGCGGGGC            TTTTGCATTCTGGAG 100 142
 JC965_12395 2549101 .. 2549115 + -12.8  -5.21709   ATCTGGTGCGCAAGA               CCGGCC TGT GGCCGG               TTTTTTCATGTCACA 100 53
        radC 2553710 .. 2553745 +  -6.2  -3.72893   TAAAATGCCGCCTTC    TGTTTGCCCCGC AATCGAAGGCCA GCGGGGCAGATA     TTTGCTCGAGCAATG  61 88
        rpmB NONE
        rpmG 2554222 .. 2554238 + -10.8  -5.64274   GTTTCGCTGCAAAAA              CCCGGC CTCGT GCCGGG              TTTTTTTATGGCTGG 100 48
 JC965_12440 NONE
        mutM 2555555 .. 2555580 +  -6.1  -4.56597   ACCACGGTGTTCTGC         TCCCACTGCCA ACGC TGAAAGTGGGA          TTTTTGAGCCGGAAC  75 8
 JC965_12450 2556640 .. 2556672 + -15.8  -3.87815   TGCAGTGCGTTGATG     C-AACAAGGGCTACC CGCG GGTAGCCCTTGTTCG      TTTCTGCCCATCAGG 100 44
 JC965_12460 2558464 .. 2558487 + -18.2  -3.30124   CACACAGAACATACA          GACAGGGCCC CGCG GGGCCCTGTC           TTGTAGGGGATGCGC  91 46
        waaF NONE
        waaA 2562262 .. 2562296 +   -15  -2.87132   CTGGAAAGTGACGAC    TG-AGGCGGGGCGGC GTGGTG GCCGCCCCGCCAGCA     TGTCTGCCAAACCCC  81 23
 JC965_12480 2563289 .. 2563311 + -17.8  -3.69323   CATAGAAAAGAAGGA           GAGGGTCTGC ATG GCAGACCCTC           TTTGCGTGATGGTAC 100 60
 JC965_12495 NONE
        casA NONE
        casB NONE
       cas7e NONE
       cas5e NONE
       cas6e NONE
       cas1e NONE
        cas2 2573613 .. 2573631 + -13.2  -3.02511   GCCGTAGCGCTCGGG             GGCCAGAT TGC ATCTGGCC             TGTTCCCCGCGTCCG  75 336
 JC965_12545 NONE
 JC965_12550 2584983 .. 2585001 +   -16  -4.93968   TCGGCCATAAAAAAA             CCGGAGCC AGT GGCTCCGG             TTTTTCATTGTCCGT 100 57
        rluD 2586933 .. 2586968 + -24.8  -4.34402   CTCCATGATCTGACG    CGGGGCCCCTTGACTG GTTG CAGCCAAGGGGCCCCG     TTTTCATATGAACGA 100 82
        pgeF 2587739 .. 2587768 +   -15  -3.08464   GGAAAAATAGCCGAA       GAGGCGCTCGCG AGTGGC CGCAAGCGCCTC        TTCACTCCCTGGTGA  83 31
        clpB 2590577 .. 2590595 + -11.7  -5.18371   ATTGTCGATGAAAAA             CGCAGGC CTCGT GCCTGCG             TTTTGTTTTCTGAGG 100 45
 JC965_12575 2591772 .. 2591784 +  -3.3  -3.55761   CGGGATTGGCCGATG                CCACC ACC GATGG                TTTGCGGCATGCGTG  51 355
        asnC 2593356 .. 2593375 +   -10   -3.1247   CTGTGGGAGATGACA            CCCTGACT GGTG GGTCAGGG             TTCGATATAGGGGAT  66 113
 JC965_12600 2595672 .. 2595697 + -19.1  -2.87564   GGCGGGCCGCCATGA         CATGAGGCGCC TTTG GGCGCCTCATG          TGTGTGAACGGCTCA  93 46
 JC965_12610 2596498 .. 2596513 +  -8.2  -4.77757   CGGTGAGCAATCAAA              CCGGCT TTAT GGCCGG               TTTTGCTTTTTGGGG  85 50
 JC965_12615 NONE
 JC965_12620 NONE
 JC965_12625 2599942 .. 2599979 + -22.1  -3.53444   TCGAAGGGATAAATG   ACAGAGGGGCGG-CCGTC GAT GACGGGCCGCCCCTCTGG   TTTCCGACCGAATCG 100 29
        msrP NONE
 JC965_12640 2602664 .. 2602680 +  -9.4  -5.20216   ACGCCCATAGCAAAA              GAGGCC TATTC GGCCTC              TTTTTTGGTGATCTC  95 31
 JC965_12650 NONE
 JC965_12655 2604061 .. 2604080 +  -5.6  -2.54896   ATCAACGAATGACAT            CCTCGCAA CCGA TGGCGGGG             TGGGTTGAATGAGGC  46 29
 JC965_12660 2605437 .. 2605458 + -15.1   -4.3739   CCAGGGTCGAGTGAT           GGGGCTCCC CGTC GGGGGCCCC            TTTTGTGCCGCCGTG 100 27
 JC965_12665 2606106 .. 2606124 + -13.1  -4.55287   ACTGCGATAAGAAAA             CGGCGCC TCTAT GGCGCCG             TTTTGTCTGCATGCA  95 133
 JC965_12680 2612123 .. 2612141 +   -16   -4.0641   ACATAAAAATAAGAA             GAGGGGCC AGT GGCCCCTC             TTTGTATGGATGGGA 100 61
        murB NONE
 JC965_12700 2616316 .. 2616347 +   -21  -2.94912   CTCATGACGACTGAA      TGGAAGAGGGGGCC TGCG GGCCCCCTCTTTCA       TGTATGCATTGCGAC 100 50
 JC965_12710 NONE
 JC965_12715 NONE
         tuf 2619151 .. 2619170 +   -15  -4.67038   TATACACACATGAAA            GGGGTGGC TTCG GCCACCCC             TTTTACTTTTGGGGC 100 52
        gmhB 2620074 .. 2620090 +  -6.7  -4.26589   TCACAGCATCGAGCA              TCAAAAA CAA TTTTTGA              TTTTCAATGTCTGAT  71 319
        trxC 2627867 .. 2627893 + -18.2  -2.89564   CACATGATTTGACCA         TATCCCCCTGTT TCA AACAGGGGGATA         TATGTAACCTCGGCA  90 102
 JC965_12755 2629433 .. 2629455 + -17.8   -4.1891   TCAGGGCTAAAAAAT           GAGGGAGGCA TGA TGCCTCCCTC           TTTCTATTGCAAGCC 100 125
 JC965_12760 2630349 .. 2630363 + -12.8  -4.56597   ACAGATGAAAAAAAA               CCCCGC ATC GCGGGG               TTTTTCACAGGAGCA  95 56
 JC965_12775 2634401 .. 2634418 + -12.7  -3.58522   GGGCCCGCAAAAAAA             GGCGACC CGAG GGTCGCC              TTTCAACATGCTGCT  81 264
        pabB NONE
 JC965_12790 NONE
 JC965_12795 2639752 .. 2639784 + -23.6  -3.48036   TGGCCCGGCGCCTCC      CACAGCCCGGCAGA TCTCC TCTGCCGGGCTGTG      TTCGTTATGATCATC 100 71
 JC965_12805 2644168 .. 2644184 +  -3.7   -4.6644   AAGTAACATTACGTT              GACGT AAGCGAC ACGTC              TTTTTACCCTCTATT  69 247
 JC965_12810 NONE
 JC965_12815 NONE
 JC965_12820 2649292 .. 2649307 + -11.8  -5.10461   CCGGGCATAAAAAAA              CGCGCC ATCA GGCGCG               TTTTTCTTGGATCAG 100 49
        nhaB 2651954 .. 2651977 + -13.2  -4.13945   CCACACACTGATCAT          GAAAGGGGCT GTTC GGCCCCTTTC           TTTTCAGATGGGGCT  91 30
        dsbB 2652573 .. 2652601 + -16.9  -4.04579   TTCGTCACTCGACCC        TAAGAAGGGAGCC CAT GGCTCCCTTTTTA        TTTCCTCTTTATCGC 100 41
 JC965_12855 2656544 .. 2656557 +  -2.3  -4.68103   CAGCCCTCGCCGGAT               GAGTC ATGA GTCTC                TTTTGTTACCCTTCA  65 481
 JC965_12860 2658590 .. 2658621 + -13.9  -4.79667   GAGGAGCCTCGGGGC      TAATGCCAGTCAG TTAAGC CTGACTGGCATTG       TTTTTACTAGGTTTT 100 69
 JC965_12870 2660616 .. 2660634 + -13.1  -5.64274   GCAAAGCGATCAGAA             CCGGCGC CTCGT GCGCCGG             TTTTTTTATGCCTGC 100 55
 JC965_12905 2670136 .. 2670155 + -13.6   -4.8622   TGCGGGTGGAAAAAA            GGGCAGAC TAGG GTCTGCCC             TTTTTCATTGCCCCA 100 62
        yfbR 2670870 .. 2670885 + -11.8  -2.59881   GAGTGACAATAAAAA              GGGCCC CGCA GGGCCC               GTTATCACATCCATG  70 121
 JC965_12930 NONE
         mfd 2678325 .. 2678344 +   -15  -3.95584   TGCCGCCTACAACAA            CGGGAGCC CCAG GGCTCCCG             TTTCGTTGCTGGCAA  95 71
 JC965_12950 2681881 .. 2681899 + -12.4  -5.67967   GCACCGAACCAAAAA             GACCGCCT CGA GGGCGGTC             TTTTTTTATCCTACT 100 47
 JC965_12970 2686947 .. 2686960 +  -3.8  -2.85124   AGTGATTGAGAAACA               GCCT CATCTT AGGC                ATTTCCCTGATTTTC  43 212
 JC965_12985 NONE
 JC965_12990 NONE
 JC965_12995 2691150 .. 2691175 + -13.3   -4.1899   CACCAGGCTTTGCGT         CAGTGCTGCCG ACAC CGGTGGCACTG          TTTTCCATGCACTGC  95 64
         rrf 2696579 .. 2696598 +   -15   -5.4833   ACTCAATACAAGAAA            CCCCGCTC ACTC GAGCGGGG             TTTTTTATTGCCTGA 100 41
 JC965_13020 2697275 .. 2697293 +   -16  -4.23781   CCCCGCTCTCGTCAA             CACCGGCC TCT GGCCGGTG             TTTCATTTTCATGCC 100 46
 JC965_13025 2700572 .. 2700590 + -13.1  -4.05245   CATCGCATGAAAAAA             CGGGGCC ATTTC GGCCCCG             TTTGATTGTGTACTG  91 46
        pmbA 2702696 .. 2702728 + -16.4  -3.41569   CTAGCTTTTAGCACT      CAGAACCCCCGATG CGTCA CATCAGGGGTTCTG      TATTTCAATGCCTGA  93 101
 JC965_13060 2710096 .. 2710116 + -16.9  -3.47573   CGGCAAGATGGCAAA            CGGCCTGCA TGA TGCAGGCCG            TTGTCGTATCCGTGG  93 58
 JC965_13075 NONE
        lysA NONE
        dapF 2713694 .. 2713708 + -12.8  -4.62783   TCAACGGATCATATC               GGGGCC CTT GGCCCC               TTTTTCGGATGGATC  95 66
 JC965_13090 NONE
        xerC 2715474 .. 2715484 +  -2.4  -4.14739   AGGAGTAAAGAGGAA                 CAGC CAT GCAG                 TTTTACCGTCGCTGG  56 116
 JC965_13100 NONE
 JC965_13105 2716979 .. 2717015 +   -10  -3.16564   GATCAGCCCGTCTTC    GGCATGGGCCAGGGGG GCCAG CCCCTTGGCCAGCGTC    TTGATCCCCTGCCCG  64 339
 JC965_13130 2721645 .. 2721666 +  -6.5  -2.79183   AGAGCAGCAGCGGCA           CGCCGT-CCG GCC CGGCACGGCC           TATGGTGAGGCTCAG  49 222
        metA 2725156 .. 2725185 +  -5.7  -3.18383   CCTGGGTCATCAGCA      GCAGGGCG-GCCG CCAGCC CGGTACGCCC-GC       TTCCTCCGTGGCAGT  51 166
 JC965_13155 2726183 .. 2726196 +  -9.5  -5.95539   AGCCGCAAGAAAAAA               CCGCC CGAG GGCGG                TTTTTTTGTTTCACG 100 48
 JC965_13160 2727690 .. 2727700 +  -8.2  -3.01001   GGTTTGAAAAACATG                 CCCG TTA CGGG                 TATAGTTTGGAGGTC  58 136
 JC965_13165 NONE
 JC965_13170 NONE
 JC965_13175 NONE
 JC965_13180 NONE
 JC965_13185 2731251 .. 2731264 +  -2.3  -3.64487   CCCCACTAACGGTTG               GAGCA GCCT TGCGC                TTCTTAGCCGTCTCC  49 32
         rnr 2736979 .. 2737004 + -15.5  -5.67967   TGAAAACGAAAAAAA         TCCGAACCCTG TTAC CGGGGTTCGGA          TTTTTTTATGGTCAT 100 131
        rlmB NONE
 JC965_13235 NONE
 JC965_13240 2742296 .. 2742313 +  -4.1  -5.52384   CAAGTGGCCCCTCAC             CCGTGGCG CAT CGC-ATGG             TTTTTTTGCTACCCC  89 65
        rpsF NONE
        rpsR NONE
        rplI 2746028 .. 2746045 + -14.1  -5.79595   GCTCTTGCAGAAAAA             CCCGCGC ACAT GCGCGGG              TTTTTTATTTTCAGA 100 50
 JC965_13270 2746956 .. 2746966 +  -4.6  -3.64487   TGGGCTTGTCATGGC                 CCTG ACC CGGG                 TTGTTGCCACTGTGA  55 133
 JC965_13285 2748820 .. 2748830 +  -6.8  -3.32022   TCGAACCAGATAAGA                 CCCT CAT AGGG                 TTGCTGTCTGAGAGA  56 52
 JC965_13300 NONE
 JC965_13305 2750844 .. 2750855 +  -2.2  -2.54015   GCCCTGGTGTTTCTG                CTGG CCAG TCAG                 ATCTTCTAGCCCTTT  38 5
 JC965_13310 NONE
 JC965_13315 2755383 .. 2755400 + -12.7  -4.72272   GCCAGGATGACGAAA             GCCGCTC CCGG GAGCGGC              TTTTTCATGGGAGCC 100 48
 JC965_13330 2759736 .. 2759761 +  -7.6  -3.30124   GCAGGGCTGCCTTGG        CT-CGG-GCCGG ATTC CCGGCGCCGCAG         TTCTGCGAGATGAAG  58 461
 JC965_13340 NONE
        groL 2762890 .. 2762909 + -12.8  -5.88471   CGTCAAGTCATCAAA            CGGCTCGC TTTT GCGGGCCG             TTTTTTTTAGTGCTA 100 44
 JC965_13350 NONE
 JC965_13355 NONE
 JC965_13360 2765675 .. 2765704 + -15.1  -5.09204   GCGTCTGAGCGATAA       AAAAGCCCCCATC TCTC GATGGGGGCTTTC        TTTTTATTGGGCTGT 100 33
 JC965_13395 NONE
 JC965_13400 2773065 .. 2773085 +   -14  -5.06414   GGCGTGCATGGAAAA            CGGCCTGC GTGAA GCAGGCCG            TTTTTGTTGAACGAG 100 56
 JC965_13420 2776568 .. 2776611 + -10.2  -3.52918   CGATGCGGGTGATCT GGGTCGGCTGCCAGCGCGC CCGTGCC GCGCTCTGGC-GCCGGATC TTGCTTTGCAGGTTG  68 348
 JC965_13440 2779316 .. 2779338 +  -3.3  -4.67556   ATCACACTGAAGCCG           GGCCGACCA TATGC TTGTCTGCC           TTTTTGAGGTATTCT  67 100
 JC965_13445 2780053 .. 2780069 + -15.1  -5.64274   CCGATGATAAAAAAA              CCCGCGC ATG GCGCGGG              TTTTTTTATGGCTGG 100 52
        fkpA 2782238 .. 2782255 + -12.7   -4.9755   AAAGCACCATAAAAA             CGGCTCC CCAG GGAGCCG              TTTTTGCTTGTGTAT 100 45
 JC965_13465 2783804 .. 2783835 + -21.6  -2.60714   GGGCAGACATGCTGA      TGTGCGGGGCGGCC AATT GGTCGCCCCGCACG       CTTATCAGAGTTTGG 100 59
        wecA 2788149 .. 2788163 +    -5  -2.87564   AAAACTGCCAGTTAG               CCTAAT TAA ATTGGG               TCTCTCCCGCACTGG  47 26
 JC965_13495 2789373 .. 2789388 + -11.8  -5.75538   TTATCTATGAGCGAA              GGGGGC ATCA GCCCCC               TTTTTGTTTTTTGGG 100 44
 JC965_13500 2791179 .. 2791208 + -15.9  -3.70902   ACAGAGCTGCGTTGT       TGCATAACGGCCGC CTT GCGGCCGTTAT-CA       TTTCCATCTCAGGCA 100 48
 JC965_13505 2791851 .. 2791862 +  -3.6  -3.06796   GTTTGAGTGCTGGAC                GGCG GTAG CGTC                 TTGGCTAAGATAACC  46 102
 JC965_13510 2792589 .. 2792602 +  -9.5  -5.60993   CTGGCTCAATCAAGA               GGCGC TGCA GCGCC                TTTTTTTATGGCGCC 100 50
 JC965_13515 2796630 .. 2796664 + -23.8  -3.87815   GGCTGTCGCTCGATG     TGACAAGGGGAGCATC CGT GATGCTCCCCTTGTCG     TTTGTGGCGGTGCCG 100 46
 JC965_13525 2798329 .. 2798340 +  -5.8  -4.56153   GTGGTTGATCAGCCG                GGCA TGGA TGCC                 TTGTTTTTCTGCTGA  75 33
        astE 2799701 .. 2799720 + -13.6  -4.12899   GAACTCGATATAACA            GGGAGCCT GAAC AGGCTCCC             TTCTTTGCTTCTGCT  95 116
        pdhA NONE
 JC965_13540 2801983 .. 2801999 +  -4.4  -2.73275   GGATGCGCAAGTGCC             TGG-GCC ACAG GGCTCCA              TGGTGTCTGTCAATG  44 55
 JC965_13545 2803154 .. 2803178 + -16.5  -2.55829   ACAGGTCTGACCCGC          TGTACCCTGCC GCT GGCGGGGTACA          AATTTGTTTGCGTAA  85 31
 JC965_13550 2803585 .. 2803609 + -17.9  -5.50723   GCAGAATTTAAGAAA          GCCGTGGTACC TCT GGTGCCACGGC          TTTTTGTTTTCATGG 100 46
 JC965_13555 2804392 .. 2804414 +  -9.8  -3.38812   CCTCGTTCACCCTCA           TGACCAGGCG TGA TGCCAGGTCA           TCTTGTTCAAGGCGC  70 464
 JC965_13565 2805027 .. 2805053 +  -2.8  -4.15044   TCCTGCTGGACAAGG         GGTCGGCAAGAT GTG AACATGTCGCCC         TTTATTGAACGAGAG  58 69
 JC965_13570 2805645 .. 2805671 + -10.8  -5.32882   GGGGCTTGCAATAGA         AAGAGGGAGGCA TCA TGCCTCCCTCGA         TTTTTTGTCCTGATA 100 200
        tolC 2819598 .. 2819615 + -10.5  -4.87037   CACACCATGAGAAAA             GGCGGCC CCGG GGTCGCC              TTTTTCATCTCTGTT 100 49
        lpxL 2822464 .. 2822482 +   -16   -5.4833   GCGCCCCATGAAAAA             GCCCTCGC ACT GCGAGGGC             TTTTTTGTTGGCTGC 100 95
 JC965_13670 2827132 .. 2827162 +  -4.5  -3.08738   ACGGGCCCCCTCCAT       GGGGGCGGTCGGG TTGTC CTCTGGCGCTCCC       TTGAGTAGCATTCTT  47 182
 JC965_13675 2828113 .. 2828127 +  -2.8  -3.54424   AACCCCGTTGAGGGG               GCCA TTCACCT TGGC               TTTGGGGGGGTAAAA  50 30
 JC965_13680 2830243 .. 2830259 + -13.7  -5.28176   GTCTGCTCTGCAAAA              GCCCGCA TCC TGCGGGC              TTTTTTATGGCTGCG 100 52
 JC965_13685 NONE
 JC965_13690 NONE
 JC965_13695 2834609 .. 2834621 +  -4.7   -2.9155   AGCGGCTCTCCCCTG                CACGC CTG GCGGG                TGTCATCTTGCCCCC  46 45
 JC965_13700 NONE
 JC965_13705 2836808 .. 2836823 + -10.4   -4.5442   ACAGCCATCGAAAAA              GGCTCC CGAG GGAGCC               TTTTCTCATTCCGGC  93 41
 JC965_13720 2838910 .. 2838940 + -12.5  -2.75455   AAGCTGAGCTGATCA       CCCTCTCCCCGGC CCACC GCCGGGGAGAGCC       ATTCATTTCCCTTTT  74 29
 JC965_13725 2839300 .. 2839313 +  -4.5  -3.01924   GATCGACGAGTAACG               CC-GCC CCG GGCCGG               TCTTCCCCCGGCCTC  46 28
 JC965_13730 2840097 .. 2840109 +  -3.3  -3.68435   CCTAAAAAGACCCTC                GGCCT AGA AAGCC                TATTCTTTTGCCAGG  50 219
 JC965_13740 2841781 .. 2841803 + -17.8  -5.28176   GTTTACGGCCAACAA           GAAGCCCGCA TGA TGCGGGCTTC           TTTTTTATCCATGGC 100 51
 JC965_13780 2858185 .. 2858205 +  -4.5  -5.88565   CGCCGCGCCTCTCCT            CTTCACCCC ACC GGGGCGCGG            TTTTTTTCTTCTCAA 100 48
 JC965_13785 2860328 .. 2860344 + -13.7  -5.77988   GACCACCAATAGAAA              GGGAGCC CAG GGCTCCC              TTTTTTTGTCTGTGT 100 44
 JC965_13795 2863475 .. 2863500 +  -4.6  -3.44051   TCAGAATGATGTCGT         TGAGCTGGCG ATAGCG CTCCAGCTCC          TTCTGATCGTAACGG  53 32
 JC965_13865 2878694 .. 2878713 +   -15  -2.92371   ACCGACCATAAAAAA            CGCGGCCT GAGC AGGCCGCG             TCTGGTTCCATCACT  82 61
 JC965_13880 2883181 .. 2883195 +  -5.6  -3.24747   GCATGGCCGCCGATC               CCGGCA AGT TGCAGG               TTGATGGTCTCGGCG  51 458
 JC965_13890 2884961 .. 2884980 + -13.6   -4.2693   CCAAAGAAAACACCG            TGACCGCC GAGA GGCGGTCA             TTGTTTTCATCCCTT  95 146
        trpS 2886494 .. 2886519 + -10.3  -2.70932   GATTGCTGAACCACT         CCTCGCGCCAC AACC GGGGCGAGAGG          TGGTTGGCACCGGCA  60 474
 JC965_13905 NONE
 JC965_13910 2888219 .. 2888235 + -15.1  -5.76633   GATTTGTCCCCTCTA              CCGGCGC CCT GCGCCGG              TTTTTTTATCTCTGC 100 109
 JC965_13920 2889675 .. 2889686 +  -7.2  -2.80017   ACTGACTGGCCGTCA                GCCG ACCA CGGC                 GTTGTGTTCCCGCTT  54 92
 JC965_13935 2892736 .. 2892758 + -14.2  -5.60993   TACGGATATTTTGAT           CGGCTGGAAT ATG ATTCCGGCCG           TTTTTTTATCCGCCC 100 104
         gmk NONE
        rpoZ 2893911 .. 2893938 + -13.4   -3.3506   GTCAGTCGCTTCCCA        TAGTCGGCGCCC GCCC GGGTGCCGGCTG         TTCTCCCCATTTACA  81 41
        spoT 2896149 .. 2896175 +  -8.7  -4.08767   CGACAGAAAAACTGA        ACA-CAGGCGGC GCAA GCCGCCTGCTGC         TTTTCAAGAAATACC  75 26
        trmH NONE
 JC965_13960 NONE
 JC965_13965 2898692 .. 2898711 +  -2.1  -5.09895   CGCGCGCTACTGACG            CAACCAG AAGGGG CTGGTTA             TTTTTTGGATCCCTA  75 28
 JC965_13970 2899625 .. 2899645 +   -14  -5.38958   TCGCGGATCGAAAAA            GGGTGGCC CATGT GGCCACCC            TTTTTGTTTCTCGCT 100 54
 JC965_14005 NONE
 JC965_14010 2905870 .. 2905891 + -15.9  -4.91712   CCCAGCCCACACAAA           CAAGGCCCC GAAA GGGGCCTTG            TTTTTATCCATTGGA 100 42
 JC965_14015 2907933 .. 2907957 +  -5.6  -3.88291   ATCCAGCAGAACTGA         GC-ACCGGCTC TTGT GGGCCGGCCGC          TTTGTCCCCATCATG  62 26
        gorA 2909431 .. 2909462 + -13.9  -4.79667   ACCCGGCTCAGGCCG      TAATGCCAGTCAG TTAAGC CTGACTGGCATTG       TTTTTACTAGGTTTT 100 98
 JC965_14040 NONE
 JC965_14045 2911247 .. 2911268 + -17.3  -4.72846   GAGCCAAATTCGAAA           GGCCCGCTC AGAT GAGCGGGCC            TTTTTGCATCTGTCA 100 35
 JC965_14055 NONE
 JC965_14060 2916999 .. 2917024 + -19.1  -3.33696   GAGGGCTGAAAATGA         CAAGGGCTGCC CGCG GGCAGCCCTTG          TTGCTTGAGGAGAGC  95 39
 JC965_14090 2922242 .. 2922262 + -12.6  -5.35222   GGGACGATAAAATTC            GGGCAGGT GCCAA ACCTGCCC            TTTTTTATGGATTTT 100 97
 JC965_14095 2923572 .. 2923590 + -14.6  -5.81412   CCGGCCATAAAAAAA             CCAGCGAC CCG GTCGCTGG             TTTTTTTTGCCTCGC 100 46
 JC965_14105 2926320 .. 2926337 + -11.3  -2.87564   TGACCCAATGACACA             TCCCGAC CGAG GTCGGGA              TGTGTCGAGCCATCA  69 38
 JC965_14120 2930275 .. 2930293 + -17.4  -4.81083   CTTGCCCAGCAAAAA             GCCCCCGC ATG GCGGGGGC             TTTTTCATGGTTCGG 100 68
 JC965_14140 NONE
 JC965_14145 NONE
 JC965_14150 2936824 .. 2936843 + -11.4  -4.86621   ACAGAAAATGAAAAA            GGGCCTGT CACA GCAGGCCC             TTTTTCATTGGGGCT 100 52
 JC965_14160 2938549 .. 2938562 +  -9.5  -4.55287   ATTCCAAGTAATAAA               GCCCC GCAA GGGGC                TTTTCTATGACTGCG  87 91
 JC965_14170 2939446 .. 2939462 +  -7.9  -3.02829   AGTGTGCTCTGATCA              CGGGGCA TCA TGCCCCC              TGTTGGAGCCCTGTC  56 103
 JC965_14175 2940188 .. 2940216 +  -5.1  -4.33153   CTCGCCAATCCAGCC        CGGACGCCAGGCT TTC GGGCTGGCCTCCA        TTTGTTGATCTTGCC  67 141
 JC965_14180 2940863 .. 2940873 +  -3.2  -3.92373   CGCAGCGCGGGGTCG                 GTGG TGA TCAC                 TTTCTAGCTACACTA  56 8
 JC965_14185 2941921 .. 2941936 +  -3.2  -5.03747   GCAAACACATCGAAT              CAGCCT ATTT AGGCTA               TTTTTTCCGCCATTT  77 14
 JC965_14195 2944237 .. 2944256 + -10.6  -3.02263   AACAGCTAATCACCC            CGGCCCCC TGCG GGGGGCCC             TCTTCCCCGCCATGT  67 32
 JC965_14200 NONE
 JC965_14205 NONE
 JC965_14210 NONE
 JC965_14215 NONE
 JC965_14220 2950195 .. 2950207 +  -3.3  -2.80511   GCTGGCAGAGCGTAC                AGGGA GGC TCCCA                TGATTGAGTTCTGGG  41 118
 JC965_14225 2951104 .. 2951118 +  -7.1  -3.90291   GGCCGACAACACCTG               CGGGA CAGGT TCCCG               TTTCCTTCACCCCAT  66 50
 JC965_14230 2953021 .. 2953040 +   -15  -5.42259   TTATCTTTTTCTTTT            CGGCGACC TTTT GGTCGCCG             TTTTTTTACCCATCA 100 43
 JC965_14235 2954766 .. 2954796 + -12.6  -4.56775   AGATTGCAAGCCCCA       TGACAGAAGCGCCA CAA TGGCGCTTCTGCTG       TTTTTGACGAGCCAT  95 42
 JC965_14240 2955486 .. 2955507 + -10.1  -3.79251   CCATCCACCAACAAA           GAAGCCCCT CGCA AGGGGCCTC            TTTCATCATGCCGTG  75 345
        astB 2959895 .. 2959919 + -21.5  -4.84363   GACGCAATAAAAAAA          GAGAGCCGGGC AAT GCCCGGCTCTC          TTTTTAGTCCTTTGC 100 65
 JC965_14265 2962109 .. 2962128 +    -7  -3.09327   GGATTACAGTGAAGA            GGGGGTGC CAAG GCGCGCCC             TGTTGAATCCCATCG  54 61
 JC965_14270 2963071 .. 2963108 +  -7.6  -3.66378   CTTCCCCGCACGACC   GGGGCACTGGTG-CCGG CACAT CCGGGCATCGGCTCCCC   TTTGCATCCCCTATA  63 49
 JC965_14280 2965675 .. 2965715 +  -5.4  -3.65812   CTTCCCGTCTGATAC GGATAAGATGAGGCTCATC ACCG GATGAGCC-CGCCTCCTCC  TTATGTTCAGCCACG  56 105
 JC965_14285 2967590 .. 2967605 +  -2.4   -4.4009   CAACTCGGTGTAGAA              GAGCGG CTCG CTGCGC               TTTTGTGCCATCACG  65 516
 JC965_14295 2969521 .. 2969540 + -13.6  -5.61596   CGCCTCTCCCAAAAA            CCGGCATC CCAG GATGCCGG             TTTTTTTATGCCCCT 100 48
 JC965_14300 NONE
 JC965_14305 2971128 .. 2971140 +  -3.3  -2.79312   AATCCCGCCAAAATC                GCCCT ATA ATGGC                TCTCGTAAACGCTTT  41 120
        ygjK 2973810 .. 2973836 + -11.5   -4.9725   CTTTGATATCTTCAC         CGCCCTGGGTC TCGAT GGCCTGGGGCG         TTTTTCTATGAACAT 100 138
 JC965_14345 2980110 .. 2980136 + -15.2  -2.65766   CCCCTGACCCTCTCA         CCCAAGGGGAGG CGA TCTCCTCTTGGG         TCATCTCAGCTTTCC  80 34
        galE 2992630 .. 2992662 + -10.6  -3.08813   GCCAACCCCAATGGT     TACG-AGGCGTAGGC CCTG GCCTGCGCCTTCGGA      TGTATTCAACTCACA  68 14
 JC965_14385 NONE
        galK NONE
 JC965_14395 2996218 .. 2996236 +  -5.2  -2.72461   CCACGGCCTGCGCCT             GCCCGG CATCGGT CTGGGC             CTTTGGCACAACTTC  46 254
        bacA 2998232 .. 2998247 + -10.4  -5.15634   CCAAGCAACACAAAA              GGGACC CGAG GGTCCC               TTTTTTCATGCCGTG 100 53
        argS NONE
 JC965_14430 3003165 .. 3003192 + -22.8  -4.64861   CGCCGCGTCCATGCA        CAGGGCCGGGTG GCAA CACCCGGCCCTG         TTTCTTTTGGCGCCA 100 43
        hslV NONE
        hslU 3005348 .. 3005377 +   -13   -4.1585   TGCTCAACCCCATAG       C-AAGACGCCTCC CCTCT GGAGGCGTCTTCG       TTTTCAGCGTTCTCC  91 81
 JC965_14475 3009917 .. 3009930 +  -3.7  -3.55761   CCAGCCGATCCGCTG               CCCGC TGAT GCCGG                TTTGCCGGATCCCTC  52 18
 JC965_14480 3011160 .. 3011192 + -20.7  -3.53012   GGGGCGCAGTGAACA      GGAAAGAGGGCGACC CGG GGTCGCCCTCTTTCA      TTTGGCCGGGCCAGA 100 41
 JC965_14490 3012661 .. 3012679 +  -5.2  -2.71712   TGACCCTGAGGTTCT             GAGCCTCA TGA TGGGACTC             CTTTGACCAGACAAG  46 24
 JC965_14495 3013367 .. 3013389 +  -8.3  -2.61383   TCGAACAGATAGATG           CCGCCCGCC TCGCC GGTGCGCGG           GTTCTCGGTCCAGAT  53 154
 JC965_14505 3014158 .. 3014183 +  -2.4  -3.55444   AGGCCGAGCACCTTG         GGGGCCTGGC GCTCCA GCCAGCTGCC          TTTGCCCCATGCCGG  49 181
 JC965_14525 3018955 .. 3018982 + -15.7   -5.4505   GCACGACTGAACCAA        GGCCATAGACG TTGCCT CGTCTATGGCC         TTTTTTGTTGCCCCG 100 310
 JC965_14530 3019891 .. 3019916 + -20.5  -2.80291   TGACGCAATAAAAAA         CGGCGCGCAGA GTGC TCTGCGCGCCG          TGTCGTCAGGTGGTT 100 38
        glpX 3022463 .. 3022479 + -15.1  -4.64766   CTCCCGCAGCAAAAA              GCCCGGC ACT GCCGGGC              TTTTTGCGCTCTGCA 100 263
 JC965_14545 3022940 .. 3022964 + -22.9  -4.91511   CGGAGTCATGAAAAA          GGCCCCCTCGC TTT GCGAGGGGGCC          TTTTTATCGTCGGCT 100 133
 JC965_14585 NONE
        kdsC NONE
        lptC NONE
        lptA NONE
        lptB 3031073 .. 3031089 +  -6.5  -5.10461   CAATTCAGTCTATAG              TAAGGGG GCA CCCCTCA              TTTTTGTTAGGTGAC  86 26
 JC965_14610 3032557 .. 3032571 +  -2.1  -2.71712   ATCCCGCCATCCAAT              CA-GCG CAAA CGCCTG               GTTTAGGCAAACAAA  38 5
         hpf NONE
        ptsN NONE
        rapZ NONE
         npr 3034599 .. 3034618 + -13.6  -4.90266   GCAAAATCCCGACAA            GCCAGCAG ACTT CTGCTGGC             TTTTTCGTTCATCAG 100 90
 JC965_14640 3036950 .. 3036968 + -11.7  -3.32844   CCCTTTCATGAAAAA             CGCCTCC ACAAG GGAGGCG             TTCTGGCATCAGAGG  74 215
        lpcA NONE
 JC965_14655 3041190 .. 3041211 + -14.5  -3.61398   CAGAAATAAAAAATA           CCAGGGTAG ATGT CTACCCTGG            TTCTTCGCAGCAGCC  86 32
 JC965_14660 3042227 .. 3042254 +  -3.4  -3.57144   GGCTCAGCGCCTCGA        CCGCTTCGTGC GTGGCGG GCACGAC-CGG        TTTCAGGCTCAGGGC  51 433
 JC965_14670 NONE
 JC965_14675 3046171 .. 3046192 + -13.1  -2.77013   TTTGGGTAAAAAAAA           TGGTCAACC TGGT GGTTGACCA            ATTCTTCAGCAAATA  74 52
        moaA 3051466 .. 3051489 +  -5.3    -3.646   TTATCAATCCTCACA          TAGGGGTAA TTTACC TTGCCCCTG           TTGTGTCTAATTGCG  56 75
        napF NONE
 JC965_14710 3052593 .. 3052629 +  -8.6  -2.95789   GCAAAGGAATAAAGC    GCCATGGAGCTGAGCC AGCGC GGCTCGTCACAATGGC    TGTCATTGATGTGAT  58 142
        napA NONE
        napG NONE
        napH NONE
 JC965_14730 NONE
 JC965_14735 3057835 .. 3057877 + -18.4  -3.14931   GGTGCCAGGCTTCTG ATGGGAAGGCCGCCGGATCC TCG GGATCCGGCGGCCTTCGAGA TTAATGGGCAATGAC  90 25
        moaB NONE
        moaC NONE
        moaD NONE
        moaE NONE
        modA 3060639 .. 3060668 +  -4.8  -5.60993   GTGCCTGACGTGTCC       CAAGGCGGCGCC CGTCAT GACGGCGCCCTG        TTTTTTTATCGACAC  91 83
        modB NONE
        modC NONE
 JC965_14775 3063307 .. 3063326 + -13.6  -5.24531   AGGTAGATAAAAAAA            GCCGAACC CCGG GGTTCGGC             TTTTTTGTGGGCGCT 100 57
        folE 3066356 .. 3066380 + -21.5  -3.02324   AAAGGGTAGTGCTCC          CGGGGCCTGTC GCC GACAGGCCCCG          TCTCCTTTCCCTCAC 100 32
        tnpA 3067760 .. 3067781 + -13.7  -4.03234   GTGATCCTTGCCGGA           CGAGGCGCT CACG GGCGCCTCG            TTTCTATACGCGCCC  95 191
 JC965_14805 3068903 .. 3068930 +  -6.8  -3.05844   ACCCTCGTTGTCACA        TCGCAGGCGGGC GCAG GCCCGCCGCCCA         TGTTGGAGTCAAGAG  54 40
 JC965_14810 NONE
 JC965_14815 3071031 .. 3071048 + -12.7  -4.84311   AAATCCTGACAAAAA             GAGCGCC GAAA GGCGCTC              TTTTCTTGTCTGGAC 100 110
 JC965_14840 3076252 .. 3076271 +   -15  -3.33162   CCCACGCCGCCCTCT            GGCCAGCC CCCG GGCTGGCC             TTCTCCCCTCCCGTC  86 48
        glpA NONE
        glpB NONE
        glpC 3080862 .. 3080888 + -10.8  -5.32882   GGGGCTTGCAATAGA         AAGAGGGAGGCA TCA TGCCTCCCTCGA         TTTTTTGTCCTGATA 100 233
        nrfA NONE
        nrfB 3083554 .. 3083564 +  -2.4  -2.62983   ACCTCGGGCAAGGAG                 GCAC CAT GAGC                 TGCTCTCGCCGTCAC  38 17
 JC965_14870 3084266 .. 3084280 +  -3.5  -3.89346   GCATTTCACTTCCCT               TCCCT TGTGT GGGGA               TTTGTCCGATCGCCA  58 52
        nrfD 3085436 .. 3085470 + -18.6  -3.87994   ATTGAAAGCTGGGGA     TAAGCGCCAGCCGCCC TTC GGGTGACTGGCGCTTG     TTTGTGGCGATGAGT 100 181
        nrfE NONE
 JC965_14885 NONE
        nrfF 3089531 .. 3089566 +  -4.7  -3.57462   ACAGGCCTCTATGAC    TCCCTT-TATCGGGCC CAATA GCCCCGATGTGGGGGA    TTTCAAGGTGCGCTG  54 224
 JC965_14895 3090620 .. 3090647 + -18.4   -4.7497   GGCTACGAGAACAAG        GGCCCCCGAACC GGCA GGTGCGGGGGCC         TTTTTCATGAGTGGC 100 42
 JC965_14900 NONE
 JC965_14905 NONE
 JC965_14910 3093869 .. 3093891 + -19.2   -5.4505   AGTCTGCGAAATAAA           GAGGGCGTGC CTG GCACGCCCTC           TTTTTTCTTGCCCCC 100 62
 JC965_14935 3099813 .. 3099827 +    -5   -2.5409   TTAATCGAATTTTTG               TCTCAT ATC ATGGGA               TCCATTAGACGTTAT  46 106
 JC965_14940 3101455 .. 3101477 + -16.2  -5.47218   TGCCCCTTGAGGGTG           ACGGGGGGCC TTG GGCCCCCCGC           TTTTTTTGGGTAGAG 100 31
        nfsA 3102271 .. 3102300 +  -4.1  -3.79113   CGATATGGAGCAAGA       CGCACCGGATGCGG TCA CCGCCTG-GGAGCG       TTCTTGTGAGGCAAT  55 54
 JC965_14950 NONE
 JC965_14955 3103759 .. 3103773 +  -4.9  -3.59979   CGTCAACGCACAAGC               GGGCG CCACA CGTCC               TTTCAAGTGACCGAG  54 76
 JC965_14965 3105966 .. 3105984 + -14.6  -2.78596   TATCACCAATAAAAA             CGCCTCCA ATC TGGAGGCG             TATGCTGACAAGGTG  79 49
         cmk 3107568 .. 3107589 +  -8.7  -2.90496   AACTGATGTCAGTCG           TCTGCACCA AGGA TGGCGCAGA            TAATTTAAAACAACC  61 35
        rpsA 3109340 .. 3109358 + -13.1  -5.47159   CTTGATGCAAGAAAA             GGGCGGC ATTGC GCCGCCC             TTTTTTATCTTGGCA 100 43
        ihfB 3109710 .. 3109727 +  -9.9  -5.24003   AATAATGCAGAAAAC             GGCATAC CTGA GTATGCC              TTTTTCATTTTTATT 100 36
 JC965_14990 NONE
        lapB 3111382 .. 3111394 +  -4.7  -2.79183   AGATGCCAGCGTGCA                ACCGG GCC CCGGC                TCTGCTGCGCCTGGC  44 91
        pyrF 3112155 .. 3112188 + -17.5  -4.11394   CGTAATGGGCGAATG     AGC-GCAGGCCGGATC CCA GATCCGGCCTGCTGCA     TTTTGGCCGTGGGCT 100 44
 JC965_15010 NONE
        queC 3114152 .. 3114168 +  -5.7  -3.64599   AAAGCGGATCCTGAG              CCTGTGC CTA GCCCGGG              TTTGGGGTATAATCC  58 27
        queE NONE
 JC965_15025 NONE
 JC965_15030 3115702 .. 3115716 + -11.4   -5.5353   AGCAGCAATAAAAAA               CCTCGC CTT GCGAGG               TTTTTTATTGCTGTG 100 52
 JC965_15040 3118313 .. 3118336 + -12.4  -4.08064   CAGTTGCATAAGAGA          ACAAGGGGCC TGCG GGCCCCTTGG           TTTTGGCAGGGGCTT  87 30
 JC965_15045 3119009 .. 3119031 + -12.7    -4.128   AGCCTGGACATCAAA           GAGGGCGCC CATCT GGCGTCCTC           TTTGTCTATGGGAGT  91 59
 JC965_15055 3121064 .. 3121075 +  -7.2  -2.52543   GCCGTTGACGGCGGC                GGGG CTTT CCCC                 TAAATTACGCCCCGT  53 95
 JC965_15060 3121339 .. 3121357 + -13.2  -5.42514   CACCGCCAAATATAA             CCCGTTGA ATT TCAACGGG             TTTTTTCATTTCTAG 100 33
 JC965_15065 NONE
 JC965_15070 3124214 .. 3124225 +  -2.2  -4.25104   CTACTATCTAATCAG                GCAG TTTA TTGC                 TTTTAATAAAAAGAG  60 129
 JC965_15080 3126454 .. 3126481 + -16.4  -4.03888   CCGCCACCACAAACA        G-GAAGCCCGGCA TAA TGCCGGGCTTCGC        TTCTTATTATAGCTA 100 45
        elbB 3130350 .. 3130374 + -22.9  -3.91911   GGCAGACCAAAACAA          GCGGGCCGCTC AAG GAGCGGCCCGC          TTTCATTCCGGTCAA 100 47
 JC965_15115 NONE
 JC965_15120 3135986 .. 3136010 +  -9.2  -3.53012   CCCTTTTCATCGGCA          CGGGTGCTGG GTATG CTGGCGCCCG          TTTCGCACCAGCCCA  66 46
        trmL 3136833 .. 3136849 +  -7.2   -2.9294   AGCTGACGTTGCGCC              TCGGCG ATCAC CGCCGG              TATGTCGGTAATGTG  53 358
        plsB 3142651 .. 3142667 + -13.7  -5.14563   GACACCCAACAAAAA              GGCCGCA TCA TGCGGCC              TTTTTTCATCAAGGA 100 47
        fliL NONE
 JC965_15170 3145146 .. 3145156 +  -4.6  -2.78384   AACGTCCACTTTTTC                 CCCG CAC TGGG                 TCTGGTGAAAAGCCA  44 263
 JC965_15185 3147557 .. 3147572 +  -3.9  -3.67597   GCAAAGACGACATCT              TGCGC ATCCTG GCGCG               TTATTGAGTGGCGCC  52 3
 JC965_15190 3147917 .. 3147937 +    -9  -3.16267   CCTTTGCGACTGTCT           G-GGCGGCT GGTG AGCCGCCGC            TTCCATCTGCTTGGA  63 43
 JC965_15195 3149410 .. 3149425 +  -4.6  -2.79327   GCTGACGTTCAACCC              GACCTC GCTC GAGGCC               CTTTCCATGAAATAC  44 219
 JC965_15265 NONE
 JC965_15270 3165007 .. 3165020 +  -8.1  -3.53012   CGGCCGCTGCCGCAG               GAGGG GCTC CCCTC                TTTCAGCAGGGCGAA  64 137
 JC965_15285 NONE
        pncB 3168003 .. 3168032 + -15.1  -2.76696   CTACCATGACTCACC       TGAAAGGTCCGGC CCCC GTCGGACCTTTCG        CTTGTTCGAACGCCA  81 87
 JC965_15295 NONE
 JC965_15300 NONE
        phnE 3171237 .. 3171260 + -19.6  -5.40474   CCTGATAAACAAAAA          GCCCGCCGGT TTGC ACCGGCGGGC           TTTTTTTCACGAGGT 100 58
 JC965_15355 3182166 .. 3182195 + -15.9  -4.72386   ATGTTTCAGATGACT       C-ACAAGCCCCTGA TTT TCAGGGGCTTGTTG       TTTTTGGGTGATTTG 100 60
 JC965_15375 3186796 .. 3186814 + -11.6    -3.737   GCCGGGCACAAAAAA             GCCGCCAG GAT CAGGCGGC             TTTCATCACGGGTTG  80 41
 JC965_15390 3190165 .. 3190175 +  -2.4  -3.75738   TAAGTATGGTCGTGT                 GCGC CCT GCCC                 TTGTTGATCCTGGTC  51 104
 JC965_15395 NONE
 JC965_15400 3193512 .. 3193524 +  -2.6  -3.91897   GGCTCTCCCCCAGCT                GGGC AATGG GTCC                TTTGTGGGTGAGCAC  54 180
 JC965_15415 3196045 .. 3196074 + -17.9  -4.52857   TTCCCATGACAGTCA       CACGGAGGGAGGC GGAT GCCTCCCTCCGTA        TTTTCTCTCCCGCGT 100 62
 JC965_15420 NONE
 JC965_15425 3198675 .. 3198693 + -14.6  -4.51238   GACGCAATAAAAAAA             GGGAAGGC AAT GCCTTCCC             TTTCTCTTTTCTGCC 100 65
 JC965_15435 3199868 .. 3199883 +  -6.2  -3.14132   GACCAGGTTCATCGG              GAAATC CCCG GATTTC               TTGATACAACGCGCC  52 36
 JC965_15440 3199969 .. 3199979 +    -4  -3.71745   TCCTGCAGGGCGCGC                 CATT TAA AATG                 TGTTTTAAATCATTG  55 24
 JC965_15445 3200272 .. 3200286 +  -2.7  -6.09196   ATGCGCGGCGATAAA               CCGGC CCCGC GCCAG               TTTTTTTGTTTTAGC 100 127
 JC965_15450 3201578 .. 3201608 + -18.4  -3.58522   CGACCATCTCCCCAA       ACAATCAAGGCGCC ACT GGCGCCTTGATTGC       TTTCACGCTGCTGGT 100 55
 JC965_15485 NONE
 JC965_15490 3209700 .. 3209718 + -11.6  -2.85351   CGTTAGCATAGGCCC             CCCGGCGC CAG GCGCCGCG             TGTCGTATCAACAGA  69 35
 JC965_15495 3210574 .. 3210602 + -10.4  -5.76633   TTTTGAGCGCAATCC       CCCGGCGACTGATG AGA CATCAG--GCCGGG       TTTTTTTATGTCTGG 100 96
        pspA NONE
        pspB NONE
        pspC 3219006 .. 3219033 + -14.1  -3.04537   AGCTCTAATCGTGCC        GGGCCGCGAGG ATACTG CCTCGCGGCCG         TCTCTCTGATGTGAT  80 33
 JC965_15545 3220481 .. 3220493 +  -6.9  -2.78384   CACCTCGAATAACGG                GTGGG TGG CCCGC                TGTGCTCGAGGGGCG  51 29
 JC965_15550 3221621 .. 3221644 + -18.2  -5.00616   TTACAATTGTCAAAA          GCAGCCGACC CCGG GGTCGGCTGC           TTTTTTGAAGGGCAA 100 76
 JC965_15555 NONE
 JC965_15560 3222934 .. 3222969 +  -6.6  -4.82901   CTGGCGCCAACGTAG    ACAGGGCCTGCCCGGT GAAA GCGGGGCAGGCCCGCA     TTTTTGTGGGGGAGC  79 48
        tyrR 3224982 .. 3225006 + -10.6  -2.62613   TCGGCTCTGCATTGC          GGCGCCGACG GAATA TGCCGGCGCC          CTCTTTGCCATCGAG  64 406
 JC965_15575 NONE
 JC965_15580 3227081 .. 3227091 +  -2.4    -4.431   CATCGTCATCGACAA                 CGGC TGA GCCA                 TTTTGTCCCTGCGTC  63 19
 JC965_15610 3234307 .. 3234318 +  -5.8   -3.0644   ACCATCCAGTGTCGA                CCCA TCGA TGGG                 TGTTCAGGCTTGCAT  52 344
 JC965_15620 3235229 .. 3235260 +    -6  -3.23452   ATATGCCTTAACATC      ATGAGCTAACTC-AT AAA ATCGAGTTGGCTCAA      TTGACTTGTCCGGCT  54 40
 JC965_15625 3235382 .. 3235421 + -21.7  -4.83615   TACCGGCACCAGACA  G-ACGAAGGGTTGGCCTC AGTGC GAGGCCAACCCTTCGTGC  TTTTTGTCCCGGGTC 100 30
 JC965_15650 3243646 .. 3243667 +  -8.7  -2.66316   CCCATGCCCTCTTCC           TGGCC-CTGC TGG GCAGCGGCCG           TCATCTGCTGGAGGC  59 192
 JC965_15655 NONE
 JC965_15660 3245502 .. 3245520 +   -16   -4.8622   AGGCACATAAAAAAA             CGGGAGCC ATC GGCTCCCG             TTTTTCGTTGGCGCA 100 47
 JC965_15700 NONE
 JC965_15705 NONE
        trpD NONE
       trpCF NONE
        trpB NONE
        trpA 3258640 .. 3258658 + -11.7  -4.39414   TATCAGCGTACCAAA             GGGAGCC TAACC GGCTCCC             TTTCTATTTCGTATT  91 108
 JC965_15735 3259536 .. 3259570 + -13.7  -3.41366   GAGAGTGTTCAGGAT     TGGCCCGATTAGACA CTGTA TATCTGATCGGGCCA     TCTATTTTGACATGC  82 321
 JC965_15775 3271849 .. 3271860 +  -2.2  -3.54424   GCTGCGCTGACGGCA                G-GGG TTG CCCAC                TTTGCCCGGGTGCCC  48 31
 JC965_15780 3273095 .. 3273126 + -12.4  -3.86015   TAGCGGGAGGGGCCT      GCTCTGAGGACGC AGTCGGC GCGTCCTCAG-GC      TTTGTGAGCCAGGTG  83 38
 JC965_15785 NONE
 JC965_15790 NONE
        mmsB NONE
 JC965_15800 3276978 .. 3276996 + -11.7  -4.56597   ATATACCCTCTCTGA             CGCCCCT CCTGC AGGGGCG             TTTTTGCAGGGGAAA  95 51
        arcD 3278768 .. 3278788 + -11.9  -5.60993   AATCGGCACAATAAA            GGGATGGCA AGA TGCCATCTC            TTTTTTTATGGGCAA 100 39
 JC965_15810 3279663 .. 3279716 +  -4.6  -3.27475   ATTGTTGAAAAATAA GGCGAAC-GG-CTCGCGATGCGGTAG AAAG CCATTGCATTGAGGGGCCAGTTTGCC TATTCTCCTCGCCGG  49 53
         ffs 3279822 .. 3279841 +    -5   -4.5448   CTCGAGTGCCGGGAT            GTGGCTGGT AGG GCCA-CCAC            TTGTTTTTGTAAATC  73 13
 JC965_15820 NONE
 JC965_15825 NONE
 JC965_15830 3283766 .. 3283777 +  -7.2  -3.02263   ATTGATGATACTAAC                GGCC CACC GGCC                 TGTTGAGGAACCTGT  56 304
        trbG NONE
 JC965_15850 NONE
 JC965_15855 3286983 .. 3287005 +  -9.8  -3.67597   CCCTGTTCGACCATC           GTCAGCAGGG TTT CTCGGCTGAC           TTGTTGGATCGAGAG  70 212
 JC965_15865 NONE
 JC965_15870 3289884 .. 3289906 +  -9.1  -3.53224   TCTCGTCCAGGGCCG           CGTCCATCC GTACA GGCTGGACG           TTTGCCAACGGGCTA  65 444
 JC965_15880 3290685 .. 3290707 + -17.8   -4.1891   TCAGGACAAAAAATC           GAGGGAGGCA TGA TGCCTCCCTC           TTTCTATTGCAAGCC 100 59
 JC965_15885 3292215 .. 3292229 +  -7.1  -4.11216   GGCAGGAGCGCAGCG               CGCGT CCCAA ACGCG               TTTTCCCGGTAGAGC  68 328
 JC965_15905 3296303 .. 3296315 +  -7.7  -3.09015   GCGCTATGGAAACTA                TACGC GCA GCGTA                TTGGATAAATCTGGG  57 62
        msrB NONE
        msrA 3297384 .. 3297409 +  -6.8  -3.14132   GCCCTGCGGCCGGGG         CTGCAGCGGA ATAGGC TTCGCTGCCG          TTAGTGCCGCGCCGA  54 12
 JC965_15920 NONE
 JC965_15925 NONE
 JC965_15930 NONE
 JC965_15935 NONE
 JC965_15940 3300922 .. 3300963 +  -4.9  -3.37354   GACCCCGCGGTTCGT GCAGGCGCCGTGCCGCGC TAATCCC GCACGCC-CTGCGCCCGC TTCTCCATGCATATC  49 39
 JC965_15985 3308788 .. 3308805 + -11.3  -5.71712   AGCCCCATAAAAAAA             CCGACAC CAGG GTGTCGG              TTTTTTTATATCGGG 100 200
 JC965_15995 3309809 .. 3309825 + -10.9  -2.62616   TCGAACTCGCGACCC              CGACCTT GGC AAGGTCG              TGCTCTACCAACTGA  62 251
 JC965_16010 3313550 .. 3313562 +  -5.5  -2.83164   ATGAGTCTCCAACCC                GCAGC CAC GTTGC                TCTGATGATGGCTGC  47 37
 JC965_16020 NONE
 JC965_16025 3316287 .. 3316312 + -19.1  -3.14132   ACCCGCCAGAAACGG         CACAGGCCCAC CGAA GTGGGCCTGTG          TTCATGGACGCAAGA  95 40
 JC965_16045 NONE
 JC965_16050 3320837 .. 3320856 + -12.2  -5.05782   TCAGGCAAAAAAAAA            TGGCGCAT TAAA ATGCGCCA             TTTTTTCGCATGGAT 100 126
        purU 3323319 .. 3323334 + -10.4  -5.26875   CGACCCCAGAAAAAA              GGCTCC CGAA GGAGCC               TTTTTTCATTGCGGG 100 50
 JC965_16080 3327013 .. 3327032 +    -2  -3.29144   GTTTCTCGAACGGCA            GGGCGTGA CAGA TCACGGGC             TTGTCGGAAAGATCG  45 188
 JC965_16090 3328451 .. 3328467 +  -6.5  -3.05384   AAACACGCCCGAGGG              CGTGTCG ATA CCACACG              TTACCTAGCAACACA  54 98
 JC965_16115 3331899 .. 3331920 + -12.9    -3.224   GGCTAAGCGACAAAC           GAGGGCGGC CCAT GCCGCCCCC            TATTCTGGGGACTTG  78 35
 JC965_16130 NONE
 JC965_16135 3335816 .. 3335834 + -13.1  -4.85177   TTCGCTCCATAAAAA             CGGCGCC TCAAT GGCGCCG             TTTTTAATATCATTT 100 78
 JC965_16150 3339647 .. 3339670 + -16.8  -5.58454   GGGGAAATGCACGAA          GAAGGGAGGC TCAG GCCTCCCTTC           TTTTTTTGCTCTGAA 100 42
 JC965_16160 3340954 .. 3340982 + -18.1  -3.04144   CCGGGTAAGTCGCAA        GGGGCAGGGGGCG TTT TGCCCCCTGCCCA        TCTTCGCAATGCGCG  90 68
 JC965_16165 3341756 .. 3341779 + -19.6   -4.1891   CGATGCCATGAAAAA          GGCCCCGCCA GCGA TGGCGGGGCC           TTTCTATTGGCGCCG 100 52
 JC965_16195 3343326 .. 3343350 + -18.7  -3.04122   CTGGCTCTCGGCACT          CAAAGGCGGAC GAT GTCCGCCTTTG          TCATTTCTGCTCCGC  95 45
        pepQ NONE
 JC965_16235 NONE
 JC965_16240 NONE
        hemG 3356903 .. 3356920 + -12.7  -5.33405   TTCAAAGCGGCCAGA             GCCCTGC GTAA GCAGGGC              TTTTTGTTTGATAAG 100 52
 JC965_16250 3357804 .. 3357818 +  -8.5  -4.16943   CTCGCAATATTTTAG               CGGCG GGACA CGCCG               TTTTAGCCTGTGGAG  73 522
 JC965_16255 3359883 .. 3359908 + -20.5  -3.40403   TGACCACAAAAAGCA         GAGGCCCGGCA GCAA TGCCGGGCCTC          TTGTCATGAAGAGAA 100 38
 JC965_16285 3369972 .. 3369990 + -11.7  -5.44198   TCCGTTTTTGTCGGA             GCCGGTC CTTGT GACCGGC             TTTTTATTGTTTCTT 100 47
 JC965_16290 3371879 .. 3371898 + -16.4  -4.15044   TCGCATAACAAGCAG            GGCCCGCC AGAC GGCGGGCC             TTTATTACAACCGCG 100 54
        oppB NONE
        oppC NONE
 JC965_16305 NONE
        oppF 3375894 .. 3375918 + -12.8  -5.08824   AGGATGGGAGCGTGA          CAGGGGCGCC CGGGT GGCGCCCCTC          TTTTTTGCCTGCCCA 100 40
 JC965_16315 3377135 .. 3377152 + -12.7   -4.8048   GCGCAGTAAAAAAAG             GGGCTCC ATAG GGAGCCC              TTTTTCATGTCAGCA 100 44
 JC965_16325 3379058 .. 3379077 + -16.4  -3.41051   TCAGGCATATGACAA            CGGCCCGC AGAA GCGGGCCG             TTGTCATGGGGGTCA  93 57
 JC965_16345 3387765 .. 3387784 + -13.6  -5.60993   GCGGGCTGGGCAAAA            GCGGCAGA GCAA TCTGCCGC             TTTTTTTATGGGGGA 100 48
 JC965_16355 3390211 .. 3390230 + -12.1  -3.20751   AGCGGACATAAAAAA            GCGCCGG ACCAGG CCGGCGC             TCTTCGCTTATTCCC  74 30
 JC965_16365 NONE
 JC965_16370 3393555 .. 3393578 +    -8  -4.65895   CCGTTGTCGAAAGGG          GGGCTGGCGG GTGA CCGCCATCGC           TTTTTCACTGCAAGA  82 46
 JC965_16375 3394850 .. 3394867 + -12.7   -4.7173   GTGATGGAAAAAAAA             CGGGAGC AGAT GCTCCCG              TTTTTGCGTCTGGTC 100 60
 JC965_16380 3395603 .. 3395622 +  -3.5  -2.70932   GCGCCTGAGTGGCAA            C-CGGGGC CTGGA GTCCCGAG            TGATTGGGCCAACAG  42 33
 JC965_16385 3397029 .. 3397060 +   -26  -3.56092   GGCACCCTCTGGTGA      CGACAACGCCCGGC CCCT GCCGGGCGTTGTCG       TTTCGGCAATAGTGA 100 41
 JC965_16390 3398402 .. 3398425 + -15.3  -2.66695   TCCCGCTTATGACAA          GGTGCCGCG GCGCAG CGCGGCACC           GTATTTAATCACCGA  80 41
 JC965_16395 3399520 .. 3399539 + -12.8  -5.24129   CCGTCGGTATTCCGA            GCCCCGGC CACT GTCGGGGC             TTTTTTATGGCGCGG 100 47
        putP 3401302 .. 3401319 + -14.1  -4.72272   GCCTCGACGACAAAA             GCCCCGC AACT GCGGGGC              TTTTTAATGGGCAAA 100 46
 JC965_16445 3406288 .. 3406306 +  -3.7  -3.64259   CACCTGGAAGCGCTC             GGCCACC GCGTG GGAGGTC             TTCTTGACGATGGTT  53 264
 JC965_16455 3408509 .. 3408535 + -10.8  -5.32882   GGGGCTTGCAATAGA         AAGAGGGAGGCA TCA TGCCTCCCTCGA         TTTTTTGTCCTGATA 100 188
        hinT NONE
 JC965_16470 NONE
 JC965_16475 NONE
        lpoB NONE
 JC965_16485 3414603 .. 3414613 +  -8.2   -3.1082   TGCCCGGCAACGGCC                 CGCG CGA CGCG                 TGTATTCAATGAATG  60 41
 JC965_16490 3415518 .. 3415550 + -27.1  -3.78934   CGCGATGAGACAACA      CAAGGGCGGCGGGCC CCG GGCCTGCCGCCCTTG      TTCTTGTGGGGCAGG 100 44
 JC965_16495 3416140 .. 3416150 +  -4.6  -3.70344   TTCACTTTTAGTGAA                 CGGC TAG GCTG                 TCTTGTTTCATTTTT  54 92
        secD NONE
        secF 3419067 .. 3419084 + -11.3  -4.78149   CCCCGGGCAAATAAA             GGAAGGC GAAT GCCTTCC              TTTTTCCATTCTGCC 100 44
 JC965_16510 3420896 .. 3420919 + -16.8  -5.71712   GGATCGGTTGTTCTC          TCCCCGCCAT GCCC ATGGCGGGGA           TTTTTTTATGTCAGA 100 46
 JC965_16520 3422716 .. 3422750 + -18.7  -2.65766   TTCTGCTGGTTGCCT    CGAATGGGGGCTAGGC AAGT GCCTGGCCCCC-TTCG     TACTATCCGGTTTCA  91 91
 JC965_16525 3424628 .. 3424643 + -10.4  -2.64155   CCTGCCCGCGAAGGT              GGTGGC TCTG GCCACC               TGGATTTCACGACGG  64 43
 JC965_16530 3426554 .. 3426566 +  -4.7  -3.72576   GCGCTGCCACAGCGG                CCCCG GCG CGCGG                TTTGGTGGCCCGAAG  57 82
 JC965_16535 3427249 .. 3427265 + -13.7  -4.19735   ACCGATTTCGTTTTA              GGGAGCC AAT GGCTCCC              TTTCGTTTTGAGGAA  95 53
 JC965_16540 3428622 .. 3428639 + -11.3  -5.57054   TGCGAACATCAAAAA             GGAGAGG CTTG CCTCTCC              TTTTTTTAGGTTCTT 100 59
 JC965_16565 3435863 .. 3435881 +  -2.4  -3.70811   GAAGGAACTGCCTGC             AGAATGGA CGG TCTATTCA             TTTGCCGTTGTCTGA  51 54
 JC965_16570 NONE
 JC965_16575 3436836 .. 3436854 +   -16  -4.35116   GGCTGACAAGAAAAA             GGCCGGAC ACT GTCCGGCC             TTTTCGTATCCGATG 100 50
 JC965_16585 3438153 .. 3438175 + -13.4  -5.09204   AATCCCTATCATCCC           GAGGGCAGCC TGT GGCTGCCCTA           TTTTTCTTCGGGTAT 100 49
        galU 3439173 .. 3439190 + -11.3   -5.1417   GCAGAATAAAAAACT             GGGCATC ATTC GATGCCC              TTTTTCATTTTATAA 100 63
 JC965_16595 3440771 .. 3440792 + -17.3  -3.76775   ACAGCAGATACCAAA           CAGGGCGCC CATG GGCGCCCTG            TTTGCATGTGTTCAC 100 50
 JC965_16605 NONE
 JC965_16610 3443673 .. 3443698 + -13.3  -3.27022   ACGGTTGATCCCGTC         GGGCCGG-CGTC CCT GATGTCCGGCCC         TTCATATCCCCTGCA  81 33
 JC965_16615 3444445 .. 3444470 + -19.1  -3.61398   CCCTGTGAATGGCAA         CACGGTCAGCC CAGT GGCTGACCGTG          TTGTTGCAAGGCGCC 100 42
        dusB NONE
         fis 3450904 .. 3450929 + -17.7  -4.96848   TGCAGTGCAGACGAA         GGCGTATCCCA GCGA TGGGATACGCC          TTTTTCTATGCCCGG 100 56
        tsaA 3452998 .. 3453015 + -12.7  -5.24129   CAGCATGAAAAAAAA             GCCACCC TCCC GGGTGGC              TTTTTTATGGGCAAA 100 56
        cysK 3457379 .. 3457398 +   -15  -4.49389   CCAACACCAAAACGA            CGGCGCTC CTCG GAGCGCCG             TTTTCATTATGCGCT 100 49
 JC965_16685 3458047 .. 3458062 +    -9  -4.24342   TGCCCTGATGGACGA              GCTGGA GTAA TCCAGC               TTTATTCCTCCCCCA  79 16
        ptsI NONE
         crr 3460416 .. 3460434 + -10.3  -6.07627   AGCGACCGCCAAAAA             CCGAAGC CTGGT GCTTCGG             TTTTTTTTTGCCCCT 100 60
 JC965_16700 3461210 .. 3461228 +   -16   -5.1356   GCACGCCAACAAAAA             GGCCCCTG TGA CAGGGGCC             TTTTTATTCATGGAG 100 54
        rdgC 3467901 .. 3467915 +  -8.5  -5.22312   CCTGATTGCAAAAAA               CCGCC TTCAC GGCGG               TTTTTTCATCTCCAT  93 55
         ggt 3470573 .. 3470604 +   -13  -2.83343   CTCAGCACCCTCGTT      CACCATGGAGGAGG CCCG CCTCCTCCATGCCG       TGTGCTCATAGGTGT  74 47
 JC965_16735 3472602 .. 3472622 + -15.4  -4.65895   GGGGCCAGACAAGAA            GCCCGGGC CTGCA GCCCGGGC            TTTTTGCATGACGGG 100 71
 JC965_16755 3475942 .. 3475953 +    -3  -3.34716   TTGTAATTTTATTAC                GTAA TTAG TTAC                 ATTTTTAACCCATCC  46 418
 JC965_16760 NONE
        aceA 3479334 .. 3479356 + -17.8   -4.1891   TCAGGACAAAAAATC           GAGGGAGGCA TGA TGCCTCCCTC           TTTCTATTGCAAGCC 100 127
        purM NONE
        purN 3484166 .. 3484189 + -16.8  -2.94144   AGCAGTAAGACACAA          CAAGGGAGGC TTAG GCCTCCCTTG           TCATTTCCATCGACC  87 49
 JC965_16820 3490916 .. 3490936 +  -3.9  -2.64243   GACCTCGTCGTCGAC            ATCGATCAG GAT CTGAGCGAA            TAGTGTCACCTGTCA  42 2
        ppk1 NONE
         ppx 3494586 .. 3494602 + -13.7  -5.48787   CCCTCTGTGCAAAAA              GGCAGCC GAT GGCTGCC              TTTTTTGTCTCTTGT 100 46
        tnpA 3497615 .. 3497641 + -11.5   -4.9725   CTTTGATATCTTCAC         CGCCCTGGGTC TCGAT GGCCTGGGGCG         TTTTTCTATGAACAT 100 95
 JC965_16885 3505838 .. 3505868 +  -7.5  -2.62616   CCGCAGGCGAGCAGC      GCCAGCATGGCGGG CACG TCCGTCA-GCAGGC       TGATATAGAGGGTGA  51 282
 JC965_16905 NONE
 JC965_16910 3511183 .. 3511201 +  -8.1  -4.57755   GCATATTCTCTGCAA             GCCCTGG TCCGT TCAGGGC             TTTTGTCTGATGAGT  82 96
        serC 3512444 .. 3512470 + -23.8  -4.57073   GTGTCTCCCCATTGC         CAGACGCCGGGG ACT CCCCGGCGTCTG         TTTTTCAGACCCATC 100 44
        aroA 3514021 .. 3514047 + -10.8  -5.32882   GGGGCTTGCAATAGA         AAGAGGGAGGCA TCA TGCCTCCCTCGA         TTTTTTGTCCTGATA 100 170
        aroG 3515381 .. 3515399 +   -16  -5.27938   CGGGGCAATAAAAAA             GCGCGACC CTG GGTCGCGC             TTTTTGTTTGGCCAT 100 60
 JC965_16935 3517411 .. 3517456 +  -2.4  -2.75708   AGGATGCGGCTGGCC TGGCGCCAGAGAGCCGCGATC AACCG GATCGCGGTTC-CACTCCCCG AATTTTTTGCCGGCA  39 48
 JC965_16940 NONE
 JC965_16945 3519575 .. 3519604 + -20.1  -3.34398   GGGCCACATCAATGA       CAGTCGGGGGAGCC AGT GGCTCCCCCG-CTG       TATTTCAGGGGGAAG 100 62
        rsmF 3521615 .. 3521641 + -11.6  -5.86465   AGCCAATTCCCCTAT         GCCAGGTACAAG GAA TTCGTACCTGGC         TTTTTTTGTCTTCTT 100 188
         maf 3535471 .. 3535508 + -25.9  -3.31144   ATAACAAGAACTCTG   CCATGAAAAACGGGAGC CAAG GCTCCCGTTTTTCATGG    TTGTCAGCGTGGCAG 100 37
         rne 3540030 .. 3540066 + -16.1  -3.76885   GCAGACTCGTTAGTC    TGAATAAAGAGCCACAC ATC GTGTGGCTCTTTTTTTA    TCTCTTTTTTTGGGC 100 41
 JC965_17060 3543003 .. 3543015 +  -3.4  -4.54047   AAACTCAGTGCCCGA                TCAG AAGGG CTGA                TTTTCTATGCCATCG  67 474
        urtA 3547063 .. 3547090 +  -7.6  -4.59853   GTTAATTCCGTGACT        GACAGGGCGGGA GATA TTCCGCCCTGAA         TTTTTAACACCTTCG  79 36
        urtB NONE
        urtC NONE
        urtD NONE
        urtE NONE
 JC965_17105 NONE
 JC965_17110 NONE
 JC965_17115 NONE
        ureC NONE
        ureE NONE
 JC965_17130 3555757 .. 3555775 +    -3   -2.6581   GTGGTGCTTGCCTCG             GCGTCAGC ACT GTTGGCGG             GTTAATTCATGATTT  40 2
 JC965_17135 NONE
        ureG 3557200 .. 3557230 +  -6.8  -3.09327   TGATTTTCACAGACA       GTCCCGATTGTTAC GAT GAGACAATCGGGGG       TATTGAATGAAATCG  54 100
 JC965_17155 NONE
 JC965_17160 NONE
 JC965_17165 NONE
 JC965_17170 3564905 .. 3564917 +  -4.7  -2.74144   ATGCGCTCACCCTTC                CGCTG AGC CTGCG                CTTTCGCGATGAGCA  44 248
 JC965_17200 NONE
        dapE NONE
 JC965_17210 NONE
 JC965_17215 3571816 .. 3571829 +  -2.3  -4.59109   GCGCTCCTGCCCCCT               TCCCG ACCA CGGCA                TTTTTCCGCCCTCTG  65 62
 JC965_17220 3573777 .. 3573795 +  -4.4  -3.01726   AGACCCCGTCTAGGC             GCCGGCCA TCG TAGCCCGC             ATTTGTGTGAGAAGG  46 28
 JC965_17225 3574959 .. 3574985 + -19.5  -4.69664   CGGGCCTATGTAAAA         GGCCACCTCCC GAGCA GGGAGGTGGCC         TTTTTGCATCATCTA 100 61
 JC965_17235 3577541 .. 3577555 +  -6.4  -4.62069   TCCCCCTTCACGCCT               CCTGTT TAA AACGGG               TTTTTGCCATCAAGG  75 97
 JC965_17240 NONE
 JC965_17245 3578504 .. 3578527 + -19.6  -4.39329   TGCTCCCATAGAGAA          GGGGCCAGCC TTGC GGCTGGCCCC           TTTCTTGTCTGGCCT 100 58
 JC965_17260 3581023 .. 3581037 +  -5.6  -2.63596   GCAACGGCCCCCACC               CCCCAC TCG GTGTGG               TGCTATCAGATCAGC  46 113
        yiaY 3583360 .. 3583376 + -15.1  -5.11063   GGGCAAGATCTGCCA              GGGCCGC CAC GCGGCCC              TTTTTATTGGCTGAT 100 43
        bamE 3583828 .. 3583841 +  -9.5  -4.87592   GATGACATCACAAAA               CCGGC TTCT GCCGG                TTTTGTTCTCTCTGG 100 40
 JC965_17280 3584579 .. 3584596 + -14.1  -3.28924   CGAGACGATCACAAA             GGGGCGC CACG GCGCCCC              TTGTCACAACCCATC  83 55
        smpB 3586185 .. 3586198 +  -9.5  -2.53876   TAAACCAGCAATCGA               CCGGC CAAG GCCGG                TCGATTGCCATCAAC  62 73
        ssrA 3586741 .. 3586758 + -11.3  -5.86976   TCCAAGAGCAAGAAA             GCCTGCA GAAA TGCAGGC              TTTTTTCTTTTCTGC 100 147
 JC965_17310 3588705 .. 3588722 +  -2.5   -4.7497   TTTTCTTACTCTTGC             GGTGTGG CGCA CCTCTCC              TTTTTGCTGCCTCAA  69 48
 JC965_17315 3590163 .. 3590176 +  -3.7  -2.90349   TCGCACCTTCCCTAA               GCCAG ATTT CCGGC                ATTTCGCTTTCAGGA  44 176
 JC965_17345 3595948 .. 3595976 + -13.2  -3.40597   AAGAAGACCTCCTGA       TGA-CGGGGCCCG GCAA CGGGCCTCGCTCA        TGTTTGCCTGAGAGC  79 26
        nhaD 3597485 .. 3597498 +  -3.7  -2.78032   TAGGGGCGCACCTGT               GGCTC AACA GCGCC                CTGTTTTAGGCAACC  43 3
 JC965_17355 3598130 .. 3598149 + -13.6   -4.8622   GCCCCGATGCAAGAA            GCCCTGTC CATG GACAGGGC             TTTTTCATTGCAGGG 100 48
        metG 3617729 .. 3617747 + -14.6   -5.5208   CAGTCCCAATGAAAA             GAGAGGCC AAT GGCCTCTC             TTTTTTATCTTGTGG 100 57
 JC965_17455 3620302 .. 3620330 + -14.6  -2.87132   CGGATCTGACCACTC        CGGCAGGCCATC GTCCA GATGGCCTGCCA        TGTCTGGGCCAGGCG  79 32
 JC965_17460 3621741 .. 3621759 + -10.2  -5.60993   GCAAGCCATCAAGAA             GCCCGCGA TCG TAGCGGGC             TTTTTTTATGCGGCC 100 94
 JC965_17470 3624484 .. 3624496 +  -3.3  -4.56775   GTGTTCACAGGCCGC                CAGGG CCA CCCTA                TTTTTGCGCGCACAT  67 289
        selD NONE
        mnmH NONE
 JC965_17485 3627508 .. 3627521 +  -5.9  -3.28712   CCAGCACCCGGTCCA               GGGGC CAGG GCTCC                TTGTAGGGACGACGC  52 162
        priA 3634701 .. 3634719 +  -5.9  -3.05596   CAAAGAACTCCGCAT             CCCGTGC CATCA GCACGGC             TTCGATCAAGGCATC  49 387
 JC965_17530 3635423 .. 3635450 + -21.4  -3.72576   TCACACCCACATAAA        CAACGAGGGGGC CAAG GCCCCCTCGTTG         TTTAATAGCAAGGCA 100 27
 JC965_17570 NONE
 JC965_17575 3645635 .. 3645673 + -10.4  -3.82499   TAAAATAATATCTGT   TATACGAACGCCCTGA AATTCAC TCAGGGCGTTCAGATA   TTTGCTCGATTTCCT  77 53
 JC965_17580 NONE
 JC965_17585 3650556 .. 3650566 +  -2.4  -3.27298   GCTGCCAGAACGGAT                 GCAG AGG CGGC                 TTGCTACTTGAACGA  44 153
 JC965_17590 3651068 .. 3651089 +    -3   -2.9176   GGTTATGTCGATTAT           CTTGATTC TCATAT GAACCAAG            TATGTGGGTAAGGTT  42 57
 JC965_17595 3651883 .. 3651896 +  -2.3  -3.89215   AAATCCAATTCCAGA               AAGGC TACA GCCTG                TTTGAGTTTCTCAAG  54 505
 JC965_17610 3654087 .. 3654105 +    -6  -5.28176   ACCGGGAATAAAAAA             CCATCC CGCTTTA GGATGG             TTTTTTATGGATGAC  89 144
        aceK 3663125 .. 3663151 + -13.7  -2.72511   CACATTCTTATGCAC         GCTGGCGCAGG GGTCG CCTGCGACAGC         CTTTGACGAGATCCC  75 83
 JC965_17655 3664640 .. 3664650 +  -2.4  -3.13403   GATCAGCGATCCTAA                 GGGC ATC GCCA                 TGTTCATCGCAAAGG  43 463
        arcA 3666409 .. 3666428 + -13.6  -4.96848   AACAGACAACAAAAA            GCCCACTC GCAG GAGTGGGC             TTTTTGTGTGAAGAC 100 138
        cydD NONE
        cydC 3670444 .. 3670472 + -14.5  -2.78596   GATATGGCTAAAAAT        GGGGCTGGTCGCC ATC GGCGACTGCCCCC        TATAATGGCCCACTC  79 68
 JC965_17695 NONE
 JC965_17700 3671306 .. 3671333 +   -20  -4.01888   GAACACCCCACATGA        GAAGAGGGCACC CCGG GGTGCCCTCTTC         TTTATGATGTCGGCT 100 56
 JC965_17715 3673564 .. 3673574 +    -4  -4.55016   AGAAATCGAAAGAAT                 TACT TTT AGTA                 TTTTGGATTTTTTGT  72 452
 JC965_17740 NONE
 JC965_17745 3679476 .. 3679502 +  -3.6  -3.85698   ATGAGAGGGGACCGG         CGGTTTTATACC GTG GGGGAGAAACCG         TTTATGCCACGAAAG  55 68
 JC965_17855 3701476 .. 3701488 +  -2.6  -2.51471   ATGACGATGACATGT                TCGG TCACT CCGG                GTTCATGGGGTTCTG  37 204
 JC965_17865 3703190 .. 3703203 +  -5.3  -2.95317   AATCCTGAGAAGAGC               GTTCA CATA TGAAC                CTTATTCCTTTCTAG  48 80
 JC965_17870 3704367 .. 3704388 + -13.1  -4.60797   CGCCCAAAACAAAAA           GCCAATGAG AAGA CTCATTGGC            TTTTCTGTATCAGAG  95 45
 JC965_17880 3706450 .. 3706469 +   -15  -3.75024   CACGCAGATGCAAAA            CGGGAGGC CAAG GCCTCCCG             TTCTTCATGGTGAAC  95 49
 JC965_17910 3716000 .. 3716018 +  -8.8  -5.96894   AGATCAATCAAGTAA             GCCCCTGA TTA TAAGGGGC             TTTTTTTATTTGCAT 100 65
 JC965_17915 NONE
 JC965_17920 3719014 .. 3719037 +  -2.3  -3.68569   CTTGGATCCACAACT          GCCGCGCTGC GCTTG GCTGC-TGGC          TTGTTCAGTGAGTCG  48 282
 JC965_17925 NONE
        bamE 3720395 .. 3720407 + -10.5   -3.1886   TCAACCGAATGCAAA                CCCGC CAC GCGGG                TTGCTCCGGTTACCT  68 292
 JC965_17935 3721227 .. 3721241 +  -2.8  -4.84918   AAAGCATTCTCATTT               TCTTGA CAT TCCAGA               TTTTCTCTTTATAAA  74 191
 JC965_17940 3721407 .. 3721438 + -19.6  -4.62069   CACCGCCAAATAAAA      CAAAAGGCCCTGTC GCAA GACGGGGCCTTTTG       TTTTTCCGGTAGCCG 100 24
 JC965_17945 3723019 .. 3723033 +  -4.2  -4.52857   GATAAGTGCCGAGGT               GTCACA GGG TGTGTC               TTTTATGTAACAAGT  71 1
 JC965_17950 NONE
 JC965_17955 3726310 .. 3726325 + -10.4  -5.80951   CCGCAATAAGAAAAA              CCGACC TGAT GGTCGG               TTTTTTGTTTTGGCT 100 218
 JC965_17990 3735217 .. 3735231 +  -2.7  -4.21922   TGAGTCAGACAGGAA               TGCCG CCTGA CGGCC               TTTGCTTTTCAGTGG  61 191
 JC965_18005 3738249 .. 3738259 +  -3.2    -3.767   GTTCGATGTAGGCAT                 TCTG CTG CGGA                 TTTCCTGGCTGGATA  53 458
 JC965_18025 3739244 .. 3739266 +  -6.2  -2.54193   GCTAGGTTGCCAGCA           CGCCGTCC TTGTCTC GGGTGGCG           TGCCTTGCCATCGTC  48 36
 JC965_18030 3740948 .. 3740970 + -17.8   -4.1891   TCAGGACAAAAAATC           GAGGGAGGCA TGA TGCCTCCCTC           TTTCTATTGCAAGCC 100 119
        dinG NONE
 JC965_18055 3748035 .. 3748051 + -13.7  -4.73388   GCACGCCTGCATCGA              GGGGAGC CTG GCTCCCC              TTTTTCATACCCGTT 100 49
 JC965_18060 3749007 .. 3749028 + -15.9  -3.60525   GCCCATGACGAAAAA           GAGGCGACC CTTG GGTCGCCTC            TTCTATATCCGTGCA  91 54
 JC965_18075 NONE
 JC965_18080 3754598 .. 3754622 + -14.2  -4.18018   TCGGCCTGTGATAAA          GGGGCCCGGC ACCGC GCCGGGCCCG          TTTTCCGTCGAGCGA 100 30
 JC965_18085 3755360 .. 3755378 +  -3.8  -3.03443   CGCCTGGCTGACATG             GCGTAACG GGA TGTTACAC             TCTCTGTACTCATCC  44 58
 JC965_18090 3756195 .. 3756210 +  -3.3  -3.62746   TGGTTATGGTATCTC              CATGA AAGCAA TCATG               ATTTTTTCCAGTACG  50 77
         rnk 3756771 .. 3756829 +  -8.3  -3.89346   GGGAGCTGCACCGCT GACAGGCCGCCAGGCGGCCACTCTGGTC TGATGC GACCAG-GTGGCTGACT--CGGTATGTC TTTGTCCGGTCGGAG  71 24
 JC965_18145 3765652 .. 3765687 +  -6.9  -4.65168   ACCGGCTCCTGGGAG    CCGCAGTG-GATGGAG CGTTA CTTCATCGCGCTGCCG    TTTTTCAGCTCTGCT  76 55
        yjbD 3766641 .. 3766653 +  -4.9  -3.62775   GATTTGTGCAGGCAG                TTATC CCC GATAA                TTCTTGCCAGATAAT  54 294
 JC965_18155 3767034 .. 3767047 +  -9.5  -5.45652   CAAGAATTGAAAAAA               CCCGC TTCG GCGGG                TTTTTTGTTGCCCAT 100 82
 JC965_18170 3769902 .. 3769919 + -12.7  -5.71712   CCGGCGAAAACGACA             GGGTGGC GCAA GCCACCC              TTTTTTTGTCTCCCC 100 103
 JC965_18175 3772092 .. 3772107 + -11.8  -4.90917   ACCAGGCAGCAAAAA              GGGGCC CGCG GGCCCC               TTTTTCATTCACTTT 100 49
        glnK NONE
 JC965_18195 3775684 .. 3775711 + -25.6  -5.41143   CACGCCATCTGCTTG        CGGGGCCCGGGG GAAA CCCCGGGCCCCG         TTTTTTTGGCGGCTC 100 42
 JC965_18210 3778412 .. 3778435 + -16.8  -5.48213   CGAGCCAATAAAAAA          GAGAGGCAGC CATG GCTGCCTCTC           TTTTTATTTTCAATG 100 52
        dnaB 3781253 .. 3781274 +  -7.9  -2.89323   GATGACTACTAAGTA           AGTCGGGAG CCTG CTCCCGGCA            TCTATAAACAGTTTT  56 29
         alr 3782519 .. 3782540 + -14.4  -4.72986   AAGGGAGAACAAAAA           GGCCGCCC CGACAA GGGCGGCC            TTTTTCATGGGCGTG 100 83
 JC965_18235 3787415 .. 3787446 + -10.2  -4.16842   TGACGGCAGATCTGC      AATGAAAAGGGCGC CATG GCACCCTTTTCATC       TTTATTGCCCATCAC  81 38
         ung 3796455 .. 3796489 + -11.4  -2.78596   GCGGCCTGACGCCGT     GCATGCACAGGGGAAA TGG TGTCCCCTGTGCCTCC     TGTGGTGAGAGGCTG  69 32
 JC965_18280 3797173 .. 3797199 + -20.9  -4.87665   GATCACCCATAAAAA         CAGCGCCCCGG TCAAT CCGGGGCGCTG         TTTTTATGGCTCCAC 100 44
 JC965_18295 3800737 .. 3800754 + -12.7   -4.7497   TGCAAGGTGATTGAA             GGGGAGC CATG GCTCCCC              TTTTTCATGGGTAAA 100 49
 JC965_18300 3802068 .. 3802094 + -15.8  -3.05384   CGTCGCTGAGCCTTG         AGGGCACGTCGC ATC GCGGCGTGCCCG         TTACCTCGGACCCGA  85 49
         tkt 3812086 .. 3812111 + -16.9   -5.5604   AGCCGGAAAATAAAA         CGCCCTCCATC GCAA GATGGGGGGCG          TTTTTTGTTAGTTCG 100 71
 JC965_18350 3813300 .. 3813312 +  -6.2  -3.52877   ATTTTCAGTGCTTGA                CGGC GATCG GCCG                TTCTGATCTATTACT  56 48
 JC965_18380 3819239 .. 3819277 +  -7.4  -3.31248   GCTGTCATTGACCAT  GAGGGCC-CC-CGCCATG GGCAG CAGGGCGCGGCGGCCATC  TTCTGCCAGGTATTC  58 269
 JC965_18390 3820939 .. 3820952 +  -3.1  -3.14132   CCTGGCTGTACCAGT               GGAAG CTCT CTTTC                TTGATGCGACGAAGA  44 165
 JC965_18400 NONE
 JC965_18405 3825076 .. 3825095 + -11.4  -2.71712   CTGCGTGGTGGTGGC            CCTGGGCT GATC GGCCCAGG             CTTTGCCGGACACCG  67 16
 JC965_18420 3829658 .. 3829706 +  -5.3  -4.11281   ACCCGGCCGGATCCG CCTGC-GCCGCCAGCAGCGCGATG GGGC CAT-G-GCAGATGGCGGCCGTGGG TTTGTGGTTGTCATG  65 408
 JC965_18430 3831468 .. 3831486 +  -4.4  -3.69216   TCGCCCATCGTGACG             TCCAGCAC CCA GTGCAGGC             TATTTTCGATGGCCC  54 242
 JC965_18450 3833923 .. 3833933 +    -4  -2.71712   TCTCGCCCGACTCTC                 CTAT TAA ATAG                 CTTTACGCCGCGACC  42 235
        tnpA 3837956 .. 3837966 +  -2.4  -3.71917   TCCCACCTACGTCGG                 AGGG AGT CCCC                 TTTCGCATTTAAGAT  51 60
 JC965_18480 NONE
 JC965_18485 3839318 .. 3839340 + -20.6  -2.55351   GGTCCCTGACCTGCA           CGGGCCGGCA TCC TGCCGGCCCG           CTTCCTGTCAGCACG 100 41
 JC965_18490 3841228 .. 3841248 +  -8.9  -3.95986   CCGGTTTGATTATCG            GGGCGGTTT CTG ATGCCGCCC            TTTCGTTCAGTTAGA  73 70
        dacB 3842845 .. 3842870 +  -7.5  -2.64735   AGCTTTGACTGACAG         GGC-GCCACGGC TAT GCTGTGCCAGCC         TCATCTCAATGGCCT  53 166
 JC965_18500 3843187 .. 3843217 + -21.4  -2.78816   TAAGCCCCGACACCA       TGAAAAAAGGCGCC TCT GGCGCCTTTTTTCA       TGTCGTCAAACCTGC 100 38
 JC965_18510 3845032 .. 3845047 + -10.4  -5.27206   AAGGCTCATGAAAAA              GGCTCC CGCG GGAGCC               TTTTTGTTGTCTGTC 100 43
 JC965_18550 3853507 .. 3853526 +  -7.9  -5.93252   CAAAGAGTGGTAAAA            GCCTGAT CTCCGA ATCAGGC             TTTTTTATTTTTGAG 100 42
 JC965_18555 3854335 .. 3854379 + -21.5  -3.53444   CCTGTTTATGTCCCT CTTCGCAGCAGCTGGCCAC CTTAAGA GTGGCCAGCTGCTGCGTCG TTTCGGCGGCAGTCA 100 85
 JC965_18570 3859518 .. 3859543 + -16.1  -4.00756   TCCGTAAGCAGGGTA         TGGGGGCCGGG TGTG CCCGGCCCCTG          TTATTTGATGGAGTG 100 34
 JC965_18575 3860181 .. 3860201 + -11.2  -5.71712   CGACATGCATAATGA            CCTCCATC TAAAT GATGGAGG            TTTTTTTATGTGGCG 100 52
 JC965_18580 3860937 .. 3860955 + -11.7  -4.05446   TGTCCATCACTCAAA             CCCGAGG CAACC CCTCGGG             TTTGTCATTGCAGGG  86 52
 JC965_18590 3863104 .. 3863129 +  -9.7   -5.2112   GCCCCGCGAGTGATG         GGATGCCAGCG ATGA TGCTGGCATCA          TTTTTTCATCCTGTT 100 49
        ppsA 3866728 .. 3866746 + -13.8  -4.96848   CGCTTTTTGATGACA             CGGCGCCG CAA TGGCGCCG             TTTTTGTCTGCGCCC 100 50
        modF 3868465 .. 3868494 +  -2.7  -3.64703   TGAGGGCGAACAGAA       AGGGCGCCATGTT GTCC ATCATGGCGGTCA        TTTCACTAGGGAGAG  49 214
 JC965_18620 3869480 .. 3869506 + -15.2   -4.2828   TACGTGTACTTCTCA         GGCCCTGGATTC ACC GAATGCAGGGCC         TTTTGCTGGGTGGCA 100 56
        flgA NONE
        flgM 3886123 .. 3886139 +  -3.6  -3.09516   TCTGGATAAACGGTT              GGGATG ATGGA CCTCCC              TTCGCTGCTGCGCGC  46 19
 JC965_18720 3886846 .. 3886856 +  -6.8  -3.28924   AACGCCGCCCATCCA                 CCAG TAG CTGG                 TTGTAGGGCGCCGTG  55 329
 JC965_18740 NONE
 JC965_18745 3889823 .. 3889839 + -10.8  -4.66163   AGTAAGTCGATGCGA              GGGGGC CCAGT GCCCCC              TTTTTCCCTGACACT  93 36
 JC965_18750 3890530 .. 3890540 +  -2.4  -2.63913   GGAATTCGGTTTTCA                 GCAC AAA GAGC                 TAATGTGAGGTCATC  38 7
 JC965_18755 3891193 .. 3891203 +  -2.4  -4.11216   AGACGCTCAATCAGA                 CCCG CAT CTGG                 TTTTCGCGCTGAGAG  56 3
 JC965_18760 3892504 .. 3892526 + -14.9   -3.9461   TTGACGGCAAAAAAC           GAGGGAGGC ATAAC GCCTCCCTC           TTCTTGTTGCCGCCA  95 51
 JC965_18775 3896380 .. 3896409 +  -9.2  -4.07885   ACGACCGAGCGCCTT       GTGGGCCCTGAGG GCACG CC-CGGGGCCCCC       TTTTGCGAACAGGTC  75 130
        gabT 3897918 .. 3897928 +  -3.2  -5.40072   ACCGTCCGCTCATCG                 GAGC CCG GTTC                 TTTTTTTGCGCCAAA  84 146
 JC965_18785 NONE
 JC965_18790 3899518 .. 3899538 + -19.7  -3.59979   GCCTCCTGAGCGAAA            CCGGCGCCC CCA GGGCGCCGG            TTTCACATGGCGGCA 100 32
 JC965_18795 3901347 .. 3901371 + -20.1  -3.17392   ACACACGCCCAAACA          GAAGGGGAGCC CAT GGCTCCCCTTC          TTGCATTCAGACGTC 100 47
 JC965_18805 3903200 .. 3903237 + -31.4  -3.33696   GTGGCCGTCAAGTAA   CCCCGCGGCGGGGGCA CTCAGC TGCCCCCGCCGCGGGG    TTACTTGACGGCCAC 100 26
 JC965_18830 NONE
 JC965_18835 NONE
 JC965_18840 3910402 .. 3910419 + -12.7  -3.89346   CACAGGATGAATAAA             GGCGACC CCGG GGTCGCC              TTTGTCACATCCGGG  89 114
 JC965_18850 3913414 .. 3913440 + -10.8  -5.32882   GGGGCTTGCAATAGA         AAGAGGGAGGCA TCA TGCCTCCCTCGA         TTTTTTGTCCTGATA 100 180
 JC965_18865 3916144 .. 3916160 + -13.7  -5.93809   TTTTTTTTGAAAAGA              GCCCCTG TTT CAGGGGC              TTTTTTTTGTGCCGG 100 233
        pyrB NONE
 JC965_18875 3917639 .. 3917656 + -12.7  -4.59109   CAAAGGATATCCATG             TGGGCCC CATT GGGCCCA              TTTTTGAACCCTGTC  95 52
 JC965_18880 3918342 .. 3918359 + -12.7  -5.06414   TGCTGGATGCCAGAA             GGCGACC CCGG GGTCGCC              TTTTTGTTGCCCGCG 100 45
 JC965_18910 NONE
 JC965_18915 3924379 .. 3924399 +  -6.7  -4.66987   CTGGCTGATTAAAAC            GGGGGCCAA GGT TGGGCCCCA            TTTTATTACCCTCTG  76 49
         tdh 3925529 .. 3925544 + -11.8  -5.21709   TTCAGCCTCACGAAA              CCCGGC GCAT GCCGGG               TTTTTTGATGTGGGA 100 84
 JC965_18925 3926153 .. 3926170 +  -6.9  -3.65902   TCTAAGTAATTGAAA             GGGCTCC TCTT GCAGCCC              TTTCAATCCCATCAC  60 36
 JC965_18930 3928735 .. 3928763 +  -5.1  -3.44527   CCCGGGTAATCCCCA        CGTAGGCGAGGCG CCG CTCCTCCTCCACG        TTGTCCTCGTCGATG  53 230
 JC965_18940 NONE
 JC965_18945 3932414 .. 3932441 +  -4.8  -3.41988   TCATTTCCAGCCTCT        TTCTCGGCGCGGG CTC CCCGC-TCGGCAA        TCTTCTTCAATACCC  53 90
 JC965_18970 NONE
 JC965_18975 3937200 .. 3937216 + -10.8  -5.72254   AGCGTAAACCGACAA              CCGGCC CTAGT GGCCGG              TTTTTTGTTGTTTAA 100 46
 JC965_18980 NONE
 JC965_18985 3941487 .. 3941504 + -12.7  -4.82901   GATCCCATAAAAAAA             CGGCTCC CGCG GGAGCCG              TTTTTGTGGCAGGGA 100 50
         glk 3945460 .. 3945476 + -10.8  -5.65177   GCCTGAACTGTTTTA              CCGGCC CTCGC GGCCGG              TTTTTTTATGCCTGT 100 184
         ald 3955258 .. 3955274 + -11.5  -5.64274   TAGATGAGTGAAAAT              CCGCCCG CGA TGGGCGG              TTTTTTTATGCCTGC 100 62
        trxB 3956371 .. 3956392 + -15.9   -5.4505   TCGGAAGGATATAAA           GGGCATGCC AGTT GGCATGCCC            TTTTTTATTGCAAGG 100 41
 JC965_19050 3957822 .. 3957838 +  -5.1  -3.14881   AGACCATGGCCGGAT              CGTAATC CTG GATCACG              TTGATGAGCCCGTTC  48 192
         aat NONE
 JC965_19065 NONE
        infA 3959955 .. 3959974 + -11.4  -5.42265   GAATTCAGCAAAAAA            CCCCAGCC TCTC GGTTGGGG             TTTTTTGTCATTTCC 100 46
        cspD NONE
 JC965_19120 3967592 .. 3967624 + -14.2  -3.64822   ACGGGCGTGCGCCGA     GGCCAGGGGG-GC CCCTCTTA GCGCCCCCTGGCC      TTTCCCTGCCGGGAT  86 40
 JC965_19125 3969262 .. 3969275 +  -9.5  -5.20216   CTGAACAACAAAAAA               CCGCC CGAG GGCGG                TTTTTTCATGCTCTA 100 61
 JC965_19150 3972507 .. 3972517 +  -2.4  -3.14344   CGGCAGGAGAGTCCG                 CGCC CGA GACG                 TTAATCCCCCACGTG  42 74
 JC965_19155 3973086 .. 3973101 +  -5.4  -3.03124   GACGGCCTGGCAAGA              CCGGACA GCG TG-CCGG              TCTTGCCCCCTCCAA  48 45
 JC965_19160 3973888 .. 3973905 +  -4.7  -3.32963   ACTGGCGTGCGGCGA             CCCGGGT CTGG GCCAGGG              TTGTCAGATGGACAT  50 434
 JC965_19180 3976964 .. 3976974 +  -2.4  -3.01712   AAGGCCTGATAACCC                 CTGG CTG CCCG                 TCTTGCGGGCAGCCA  41 32
        tnpA 3979575 .. 3979585 +  -2.4  -3.71917   CTCCACCTACGTCGG                 AGGG AGT CCCC                 TTTCGCATTTAAGAT  51 57
 JC965_19215 3982406 .. 3982419 +  -4.5  -3.07455   GCTCTGCTCTATCTG               GTGCT GACC GGCAC                TCTCCTTTCTGGTGC  47 19
        ppk2 3987785 .. 3987802 +  -4.7  -3.59979   GATATATTTGGCCGT             GCGCGGG AACG CCTGCTC              TTTGGCATCGAACAG  54 177
 JC965_19270 NONE
 JC965_19275 3996579 .. 3996605 + -10.8  -5.32882   GGGGCTTGCAATAGA         AAGAGGGAGGCA TCA TGCCTCCCTCGA         TTTTTTGTCCTGATA 100 186
 JC965_19280 3999454 .. 3999476 +  -5.4  -3.03124   CCCGAAAGCGGCTGG           CTCCCCGCCA ACC TGCCGAGGGG           TATTACGAGCTCGCC  48 425
        tnpA 4001409 .. 4001419 +  -2.4  -3.71917   CTCCACCTACGTCGG                 AGGG AGT CCCC                 TTTCGCATTTAAGAT  51 57
 JC965_19315 4004240 .. 4004253 +  -4.5  -3.07455   GCTCTGCTCTATCTG               GTGCT GACC GGCAC                TCTCCTTTCTGGTGC  47 19
        rluE NONE
 JC965_19390 4021984 .. 4021997 +  -4.5  -3.91908   AAGGCCTTCATCTAA               GCG-CC ATT GGACGC               TCTTTTTGACGCTAT  59 26
        mnmA 4023249 .. 4023275 +  -6.5  -2.83905   AGCCATCCGGTCTAA        GGGCTGGGCGCT CACG AGCGTCC-GCGC         TGTACTCCCTTCTCC  51 26
        hflD NONE
        purB 4025487 .. 4025525 + -14.5  -4.12942   AGTGATGTAACCGAA   CCGGCGGGGGCTCTGTC ATGAC GGCAGGGCCCCCGTTGA   TTTTGGCCCATTTGA 100 40
 JC965_19410 4026766 .. 4026799 + -27.5  -5.45726   GCTGATCCAGAGGGC     TGCCGCCCCTCCCGG CGTG CCGGGAGGGGCGGCG      TTTTTTTCCGCTGTA 100 36
        pykF 4028594 .. 4028611 + -14.1  -6.32216   CTGAACCGATGAAAG             CGGCGCC TGCG GGCGCCG              TTTTTTTTTATCTCT 100 47
        mscK 4032054 .. 4032074 + -18.3  -5.93809   ATCCCGCCCGCTTCA            CAGGCCCCG TCA CGGGGCCTG            TTTTTTTTCTGCCCG 100 40
 JC965_19425 4032775 .. 4032785 +  -2.4  -3.75153   CCCCGCCTGAGAGGC                 CGGG ACT CCCC                 TTTCCCTTGACCCGA  51 31
 JC965_19430 4033854 .. 4033885 +  -9.4  -4.07687   GGGCATAAAAAAGGT      TCATCGCGGCTTTC CGGG GAAGGCCGCCTTGA       TTTTCAGAAAAAAGT  75 54
 JC965_19440 4036097 .. 4036115 +  -5.2  -3.75024   CATGATGCTGGCAGG             GATCCCGG CCG TCGGCATC             TTCTTCGTCCTGGCG  59 447
 JC965_19450 NONE
 JC965_19455 NONE
 JC965_19460 NONE
 JC965_19465 4040558 .. 4040581 + -12.4  -4.25104   GCTTACGGCAAGACA          AGGGCCACTC CATC GAGTGGCCCA           TTTTCATGCAAAGCA  90 50
 JC965_19475 NONE
        pflA 4046312 .. 4046337 + -14.7   -4.4078   GAAGTATTGAGACAG         GAGGCCGCCCG GGAC TGGGCGGTCTC          TTTTCATTGCGCCAG 100 31
 JC965_19485 4047474 .. 4047484 +  -6.8  -4.09511   CAGCAGTATAAATAT                 CGAG CTT CTCG                 TTTTCGGCAGGTGTT  68 457
 JC965_19505 NONE
        cydB NONE
 JC965_19515 4052525 .. 4052545 + -12.6   -4.4078   TTGCCCATGAAAAAA            GGCCGACA CAGGA TGTCGGCC            TTTTGCTTGCCCGGG  95 51
 JC965_19545 4057876 .. 4057909 + -12.5  -5.21709   GTCGTGCTCGCCAAT     AAAAAGAGGCCGACA TCGC TGTCGGCCTCTTTGC      TTTTTTCATCTCAAG 100 140
 JC965_19570 4064149 .. 4064161 + -10.5   -3.2794   CGGGTTGTAGCCATC                GCGCC AGC GGCGC                TTGGTGTAGCTCCAA  70 87
        msbA NONE
        lpxK NONE
 JC965_19585 NONE
        kdsB 4068084 .. 4068101 + -14.1  -5.32565   GGCTTTGATGCAACA             CGGCGCC CCAG GGCGCCG              TTTTTTAATTGATTC 100 53
        uvrY 4068933 .. 4068948 + -11.8  -4.77757   CGTGTGGACACCAAA              GGCGGC ACCG GCCGCC               TTTTGCTTTTTGCAG 100 47
        uvrC NONE
        pgsA NONE
 JC965_19610 4071912 .. 4071924 +  -7.7  -4.18197   CAAATTCAGACAATA                GAGAG TTC CTCTC                TTTTGCATGGCGCGT  71 39
 JC965_19615 4072016 .. 4072030 +    -7  -3.16742   CCTCCATATTGACAA               GCCCGC CAC GCGAGC               TTGATACCGATTGCG  54 34
 JC965_19620 4072174 .. 4072191 +  -8.4  -5.40464   CAGATTAAACAGATA             CGACGC TTCATT GCGTCG              TTTTTGTTTCTGCTC  95 65
 JC965_19625 4073775 .. 4073804 + -17.3  -5.03945   ATTTCACAGTTCCCA       GGCCCTTAAGTTC ATCT GAGCTTAAGGGCC        TTTTTATGGTTCTTC 100 110
 JC965_19630 4075736 .. 4075768 +  -9.8  -3.85698   CACTTCTTCGAGTGA     C-GACAGCCCCCAAG CTTG CAAGGGGGCTGTCAG      TTTCTGGGCCCCAGC  75 53
 JC965_19650 NONE
 JC965_19655 4080987 .. 4081000 +  -9.5  -4.17048   CCCGAGAAATTCTGA               GCCGG CATG CCGGC                TTGTTTTGCCAACCA  79 26
        purE NONE
 JC965_19665 4082698 .. 4082719 + -17.3  -5.75599   CCCTTGACATGCAAA           GACCCGGGC CAAG GCCCGGGTC            TTTTTTTATGATTTG 100 47
 JC965_19690 4087985 .. 4087997 +  -3.4  -2.75957   GCGGAAATTATGCCT                TTGG AGATA CCAA                TGATTAACGTTCCTC  41 6
 JC965_19695 4090305 .. 4090333 +  -4.5  -4.37092   TGAGTTTATGCCAAA        TCCAACTAGACAG AAC CTCACTGGTTGGG        TTTTCTAAACCAGGT  66 156
 JC965_19705 4091216 .. 4091231 +  -2.6   -4.8066   AAAAGTCAATGGTTG              GAATAGG TGC CC-ATTC              TTTTTCAATTGTCTT  72 254
        queC 4095337 .. 4095353 +  -2.9   -3.1012   GAGGCCAAATTGGCC              TCGGCTT CCT GAGTCGG              TCATTTTCACCCTTT  43 14
        queE 4096413 .. 4096427 + -11.4  -2.53213   CGCAGCGATCCCAAA               GCAGGG AAA CCCTGC               TGAGTTCAACAATTG  67 382
 JC965_19850 4112589 .. 4112616 + -17.2  -5.48787   TCTCGTTCATGCCGC        CAAATGCCAGTC CTCG GACTGGCATTTG         TTTTTTGTGTCTTCT 100 46
 JC965_19855 NONE
 JC965_19860 4114234 .. 4114251 + -12.7  -4.84359   TATTTTCACCTGCAA             GGACGCC TGAT GGCGTCC              TTTTTATCGCCATCG 100 49
 JC965_19905 4124920 .. 4124930 +  -4.6  -3.08344   CCGTCAGCCAAGCAG                 CCGG GCA CTGG                 TATATCTCCTTTCAG  47 112
 JC965_20005 4145112 .. 4145135 +   -11  -5.30155   CAAATTCCCCGAAAA          TTGCCCAGTC AAAC GACTGGGCTA           TTTTTTGGTTCATCG 100 39
 JC965_20015 NONE
        glpT 4147094 .. 4147114 + -11.1  -5.23316   AGGTACACTGCCAAA            GGCCCCG CACCTGC CGGGGCC            TTTTTTCGTCTCATC 100 77
 JC965_20025 4147921 .. 4147942 +  -7.1  -5.93809   TCCCCGTACAGGCAT           CAGGCCGCC TCGG GGCGGCCGC            TTTTTTTTCTGCCCC 100 44
        glpD 4149828 .. 4149857 +  -2.7  -2.75844   CACCACGCCCTGCCC       GAAGCCTGCTGATG ACC CA-CGGCGGGCGGC       CTTTACCGTCCGCCG  41 14
        glpQ 4151049 .. 4151067 + -13.1  -5.24129   AACACGGGAATGCAA             GCGGGGC CAGGT GCCCCGC             TTTTTTGTGCCCGGC 100 53
 JC965_20040 4152503 .. 4152528 + -16.3   -3.7347   TGATTGAACCATCGA         GGTATCACTGC CCAC GCAGTGATACC          TTGTTGCCTCTTGAA 100 62
        tyrA 4153748 .. 4153763 + -11.8  -4.94672   GACATCCATACAAAA              GGGGCC TGAT GGCCCC               TTTTTCATGTTGTTT 100 49
 JC965_20080 NONE
 JC965_20085 NONE
 JC965_20090 NONE
 JC965_20095 NONE
 JC965_20100 4162677 .. 4162705 + -10.4  -3.89131   TGGTTAACCCCTCAA       GAGT-GTGGTCAC CACA GTGACCACCGCTC        TTTAATCATTGTTCA  79 95
 JC965_20105 4166170 .. 4166182 +  -2.6  -4.83243   CATATAAAAGAGCGA                TGGC CTCCA GCCG                TTTGTTTTATCTGGA  69 471
 JC965_20110 NONE
 JC965_20115 4168756 .. 4168768 +  -9.1  -2.74144   GGCGCCGCGCTCCAA                CTGGC TTC GCCAG                CTTTGCCGGTAACGC  60 328
 JC965_20190 4184350 .. 4184368 +    -3  -3.01791   GGGGAGAGCCCCCGG             TAATCCCC GTA GGGGAAGA             TGTTGCGCAGGCGCT  43 159
 JC965_20215 4187709 .. 4187730 + -17.3  -5.24129   AGGCACCCAGTGCGA           GCGGCTCCC CCGT GGGAGCCGC            TTTTTTATCCCCGCA 100 42
 JC965_20220 4188503 .. 4188522 +   -15  -4.52781   GCGACACATAAAAAA            CGGGAGGC GCTG GCCTCCCG             TTTTGCTTGTCCTTA 100 53
 JC965_20235 4191819 .. 4191852 + -13.2  -4.56597   TGCCGCCCCCTGAAT     CCGGAACGCGCC CAGACCAGCA GGCGCGTTCTGG      TTTTTGGCCCCCGCC  95 42
 JC965_20275 NONE
 JC965_20280 NONE
 JC965_20285 4203512 .. 4203522 +  -6.8  -4.17425   GCGCTGCTGTCGAGG                 GCTG AAC CAGC                 TTTTCCCATCCTTAT  69 167
 JC965_20300 NONE
 JC965_20305 NONE
 JC965_20310 4206969 .. 4206992 +    -8  -4.28375   GGTGGGAGGGGAATT          TCGCCGGGGC GTCA GCCCCGCTGG           TTTTGAATGTATTGC  77 413
 JC965_20320 4208075 .. 4208113 +   -11  -4.62336   ACCGTTTATTTCTTA   CTATAGGGGCAGGGGAGT GAT ACTCCGCTGCTTCTGTTG   TTTTTGGCATGCAAT  95 51
 JC965_20340 4215274 .. 4215292 + -13.1  -3.53444   GAGCTTGCCACGTCG             GGGCCGG TGTAC CCGGCCC             TTTCAGCGCGCCTAA  79 212
         asd 4217142 .. 4217163 + -15.9  -5.04601   CCTGTCCATAAAAAA           GCGGCATCC CTTG GGATGCCGC            TTTTTAATTTATCCA 100 96
        tnpA 4217733 .. 4217743 +  -2.4  -3.71917   TCCCACCTACGTCGG                 AGGG AGT CCCC                 TTTCGCATTTAAGAT  51 60
 JC965_20385 4224595 .. 4224620 +  -4.7  -3.14924   TTGAAGTGATCCGGC         TGC-TCCACGTT GCA GACGTGGCCGCA         CTTTTCGATGATTTC  48 108
 JC965_20395 NONE
 JC965_20400 NONE
 JC965_20405 4226946 .. 4226965 + -16.4  -2.63596   TTCATCACAATGACA            CGGGGGCC TGAT GGCCCCCG             TGGTATGCAATGACG  85 292
 JC965_20420 4230076 .. 4230109 + -11.7  -3.09273   ACCCAAGTAAGCCGC     ATGCCATGGTGTGGC GCCC GCCACATCATGGCCC      TATCTATTGAGAGCC  71 31
 JC965_20425 4231199 .. 4231223 +  -6.4  -3.90744   CAGCAGCTACCCCGC         GGTACGCGCCA TGGT TGGCGAG-ACC          TTCTTTGAGGCGGCG  64 252
 JC965_20435 NONE
 JC965_20440 4232824 .. 4232836 + -10.5  -4.54047   TACTGGGAGCCCTTG                GCGGC ATC GCCGC                TTTTCTATACACTGC  93 88
 JC965_20445 4234302 .. 4234319 +  -8.4  -2.87132   GTGAGCGATCGGACG             GCCAGG CTGAAC CCTGGC              TGTATGACGCCCCCC  57 68
 JC965_20450 NONE
 JC965_20455 4236442 .. 4236459 +  -9.8  -5.24531   GCCCGAGACAAGCAA             GCCCCG AATCGG CGGGGC              TTTTTTGTGGGCGGT 100 48
 JC965_20475 4239183 .. 4239198 + -10.4  -4.84918   CGCTGTCACGAAAAA              GGCACC CTCG GGTGCC               TTTTGTGTTTCTACC 100 55
 JC965_20490 4242322 .. 4242339 + -11.3  -4.67563   CGGCACAATGCAAAA             TGGCAGC TTCG GCTGCCA              TTTTCATTTGTGTTG  95 46
 JC965_20500 NONE
 JC965_20505 NONE
 JC965_20510 NONE
 JC965_20515 4247841 .. 4247857 + -10.8  -5.14563   ATCCCACGCATCCAA              GCCGGC CCAGT GCCGGC              TTTTTTCATGACCGC 100 46
        pepT 4249373 .. 4249400 +  -6.2  -3.04461   CAGGGGCGTCAAGCT        GGGGCAAAGTTC AGCG GAGCCTTGCCCA         TGTTCGACGTCGATA  51 104
 JC965_20525 4251143 .. 4251164 + -15.9  -3.62275   GGGGCTGCAACGAAA           GAGGGAGGC CTGC GCCTCCCTC            TTTCACATCATGGGT  91 44
 JC965_20550 4255143 .. 4255164 + -10.1  -2.62396   GGCATCAGCTCAGCC           ACCAGCAGG TGAT CCTGCTGGC            TCATCTGCCAGCGTG  59 59
 JC965_20560 4257496 .. 4257520 + -14.4  -5.46276   TCTGCTGTAGGACAA          TCCGGAACCA ATCAC TGGTTCCGGA          TTTTTTATGTCTATT 100 202
 JC965_20575 NONE
 JC965_20580 NONE
 JC965_20585 4262662 .. 4262678 +  -8.1  -2.52676   AGATATTTCAGAACC              TCTCAAT ATA ATTGAGA              TAGGTTCGCAAGATG  55 215
 JC965_20590 NONE
        rfbB NONE
        rfbD 4265388 .. 4265399 +  -2.2  -2.74263   AGAAAATAAAGACAG                CGTG GGTA TACG                 GTTTCACGCTCCAGT  39 40
        rfbA 4266381 .. 4266397 + -12.3  -3.86015   GTAATAATGTCCCCA              TGGGGCT ATC AGCCCCA              TTTATACACCAGGTA  83 37
        rfbC 4266977 .. 4266998 + -11.6  -4.37886   TTTATCTGAATTCCA           CTCCCCGT TCCGAC ACGGGGAG            TTTTCTACCACGTAG  91 32
 JC965_20635 4268821 .. 4268842 +  -8.6  -2.57564   ATTTGTGGCCAACCA           GCGCGGCC TGTGCT GGCGGCGC            CTTGTGAGCCACTCC  56 68
 JC965_20640 4269807 .. 4269823 + -13.7  -4.51174   AGCGAAGACAAAAAA              GCCGGGA CCT TCCCGGC              TTTTGCTTGTACTGG  95 355
 JC965_20655 4271647 .. 4271671 + -22.9  -3.05596   AGCAGCCCTGAATGA          CGAGGCCCCGC AGT GCGGGGCCTCG          TTCACTGACCGCCTA 100 30
 JC965_20665 NONE
 JC965_20670 4275068 .. 4275089 +  -3.7  -2.67515   CCTGTCCACGATCTT           G-CTGGGAAG CCG CTTCCAAGGC           TCATGTGCTGCTCGC  42 44
        xthA 4276227 .. 4276253 + -11.5   -4.9725   CTTTGATATCTTCAC         CGCCCTGGGTC TCGAT GGCCTGGGGCG         TTTTTCTATGAACAT 100 144
 JC965_20695 4280362 .. 4280379 + -14.1  -3.30771   GTTCACGACACACAA             CGGGCGC CACG GCGCCCG              TTGTCACAACTGTAA  83 52
 JC965_20700 4280767 .. 4280793 +  -7.3  -3.13728   GGTGCACCGCTCAAG        GGGCAGTG-AGA TGAG TCTGCACCGCCC         TTCACTCTGGCTGCT  57 17
 JC965_20705 4281214 .. 4281229 + -11.8  -3.54146   GAACAGATACGAGCA              GGGGGC CTTG GCCCCC               TCTTTCATTACCGGG  78 52
 JC965_20720 4284582 .. 4284611 +  -4.9  -3.63515   CGCCGGGGGCATGCC       GCCCCCCATGG GGATGTGA CCATGGGCGCC        TTGTTGCAACTGCGG  54 7
 JC965_20740 4288459 .. 4288484 + -20.5  -4.99638   GCTTTTCATAGGAAA         GCCCCGAGTGC CACG GCACTCGGGGC          TTTTTATATGGCTCT 100 61
 JC965_20745 4289379 .. 4289398 + -10.6  -5.03227   GCACATCAATGAAAA            AGCGCGCC AAAT GGCGCGCC             TTTTGTTTCTGCTCT 100 156
 JC965_20765 4292521 .. 4292531 +  -4.6  -3.31144   TGCCCAGAGCCCCCA                 TGCC AAG GGCG                 TTCTCCGCCTCCAGC  50 402
 JC965_20780 4295147 .. 4295185 + -13.8  -3.25341   CTCGTCAAACACTGA   GTCCGGGGAGGGGTCGGG ACA TCTGACCCCTCCTGGCAC   TGTTCCTGTTCAAGT  81 26
 JC965_20850 4308914 .. 4308936 +  -9.1  -3.29558   GACAGCGCCTGACAT           GCCGCGACA CCACC TGTCGCCGC           TGTTCTGCATTGTCG  65 78
 JC965_20855 4309246 .. 4309266 + -11.1  -5.41746   GCTCGTAACGACAAA            GCGGCCAGT TCT ACTGGCCTC            TTTTTTTGGACCGTT 100 104
 JC965_20900 NONE
 JC965_20905 4319969 .. 4319986 + -14.1  -4.81551   ACAGCGCAACAAAAA             CGGCGCC CGAA GGCGCCG              TTTTTCATGTCCGTC 100 454
        fadI NONE
        fadJ 4331292 .. 4331317 + -20.5  -5.07486   GACGGCATACATCGA         GCGAGGCGACC CCAA GGTCGCCTCGC          TTTTTGTTGGGCGTA 100 49
 JC965_20970 4337316 .. 4337331 + -10.4  -4.88407   TGCGTCCATGAAAAA              GGCAGC CTCG GCTGCC               TTTTTCATTCCCTGC 100 51
 JC965_20980 NONE
 JC965_20985 4339565 .. 4339590 +  -9.8  -5.65177   CAGGCTGTGTAAGAA         TCCGAAACTC CTTGTT GGGTTTCGGA          TTTTTTTATGCGTAT 100 112
 JC965_21000 4340764 .. 4340781 + -12.7  -5.12068   AACGCCCCGTCACAA             GCCGACC CCGA GGTCGGC              TTTTTGTTGGGTGTG 100 69
 JC965_21010 4344838 .. 4344859 + -17.3  -3.76224   GAAGAAGAGTGACAA           GAGGGGCGC CGCG GCGCCCCTC            TTTGCTGAGTGGGGA 100 46
 JC965_21035 NONE
 JC965_21040 4352260 .. 4352270 +  -2.4  -3.08679   GCCGCCGATGTTCGG                 CCCC TCT GGCG                 TGTTCGATCCCGCGA  42 49
 JC965_21045 4353016 .. 4353028 +  -4.8  -3.04144   CGCGTAGCCGCCTGT                CCTG CCGAT CAGG                TCTTGACCATCGACG  46 212
 JC965_21050 4353397 .. 4353418 +  -2.3  -3.05715   GCCTGCTGCGCAAGT           GGATGAGC AAATGAA GCTC-TCC           TTCCATCAGCACATT  42 12
 JC965_21055 NONE
 JC965_21060 NONE
 JC965_21065 4354817 .. 4354831 + -11.4  -4.49958   GGTGCCAGCCTCCAC               GCACGC TTA GCGTGC               TTTATTTAATGAGAT  91 16
 JC965_21070 4356221 .. 4356235 +  -8.5  -2.75064   GCAGCGACCCCTATG               CCGCC ATCGA GGCGG               TGATTCCCTGGGACG  57 337
 JC965_21080 NONE
 JC965_21085 4357588 .. 4357618 + -11.8  -2.78395   CCAAGGAGACAATAC       ACAGAAGAGCGGCT CAT GGCCGCCCTTCTGC       TGCTTGCTGGCACTT  71 71
 JC965_21140 NONE
 JC965_21145 4366264 .. 4366283 + -12.2  -5.26316   CGGATGTGTTGAAGA            GCCACTTC CCGC GAAGTGGC             TTTTTTATGCCCTGC 100 75
 JC965_21155 4367505 .. 4367521 +  -9.4   -4.7497   GCATGGCATGAAAAA              GGACCC GCTCA GGGTCC              TTTTTCATGGATGGG  86 59
 JC965_21170 NONE
 JC965_21175 NONE
 JC965_21180 4372372 .. 4372390 + -14.6  -5.14477   CACTTACCACAAAAA             GAGAGGCC ACT GGCCTCTC             TTTTTTGCCTCTATG 100 291
 JC965_21195 4373235 .. 4373245 +  -8.2  -2.62184   CTATCACCCAGTAAT                 GGGG ATC CCCC                 TCCTGTGACGCGAAG  56 27
 JC965_21200 NONE
 JC965_21205 4374798 .. 4374812 + -12.8  -4.79955   GCAAAAAACGAAAAA               GGCGCC TGG GGCGCC               TTTTCTTATGCCTGT 100 51
 JC965_21240 NONE
 JC965_21245 4380059 .. 4380081 + -17.8   -4.1891   TCAGGACAAAAAATC           GAGGGAGGCA TGA TGCCTCCCTC           TTTCTATTGCAAGCC 100 218
 JC965_21265 NONE
 JC965_21270 4382479 .. 4382497 +  -8.1  -5.34309   GTTCATAAACCAAAA             TGGCCGG CAATT CCGGCTA             TTTTTATTTCGTGAT  95 49
 JC965_21435 4413201 .. 4413226 + -13.3  -4.98522   GCAGGGCGGAAAACA         GAGAAGGTGGC CTGG GCCACCCTCTC          TTTTTCTATGGCATT 100 68
        mobA 4416060 .. 4416072 + -10.5  -3.54741   CCGGGAGACCCCGGA                GGGGG AGC CCCCC                TTTGAGGCGCTGCTG  74 264
 JC965_21455 4416911 .. 4416924 +  -3.7  -3.86015   AAGGCGGCGCAACCG               CGAGC AAGC GCACG                TTTATGAGCGGGCTC  55 320
 JC965_21480 4420745 .. 4420774 + -20.9  -4.58663   CCCAGTATCCTGAAA       CAACAACGCAGCC CTCG GGCTGCGTTGTTG        TTTTTGGGCAGTCAT 100 57
        tnpA 4424416 .. 4424444 +  -7.2  -3.01712   CCAGCGTAAGCGGGA        GGTGAGCTGCGC CAGCT GCGCTGCCCTCC        TCTTCGGCGAGCGGG  56 214
 JC965_21545 NONE
 JC965_21550 4430137 .. 4430160 +    -8  -4.28375   GGTGGGAGGGGAATT          TCGCCGGGGC GTCA GCCCCGCTGG           TTTTGAATGTATTGC  77 133
 JC965_21560 NONE
 JC965_21565 NONE
 JC965_21570 NONE
 JC965_21575 NONE
 JC965_21610 4440350 .. 4440368 +   -16  -4.69664   TGGGCACAAAGAAAA             GGGGAGCC AGT GGCTCCCC             TTTTTGCATGGTATG 100 50
        sodB 4441696 .. 4441720 + -14.4  -5.46276   TCTGCTGTAGGACAA          TCCGGAACCA ATCAC TGGTTCCGGA          TTTTTTATGTCTATT 100 112
 JC965_21665 4448548 .. 4448579 +  -9.4  -4.07687   GCCAATAAAAAAGGT      TCATCGCGGCTTTC CGGG GAAGGCCGCCTTGA       TTTTCAGAAAAAAGT  75 73
 JC965_21680 4451773 .. 4451790 + -12.7  -4.17657   CGACCAATGCAAAAA             GCCCGCT ATCA AGCGGGC              TTTTCAAATCTGGTG  91 138
 JC965_21720 4454999 .. 4455027 +  -5.9  -3.28712   CCAGGGTTCGAAGAG        GAGGGCGGCAT CACGGGA AAGGCGCCCTC        TTGTGGAAGAGGCGC  54 58
 JC965_21725 4455384 .. 4455410 +   -21  -5.08178   ACGATGGCACCAGAA         CAAACGGGACCC ATA GGGTCCCGTTTG         TTTTTATCTGTGTCT 100 50
 JC965_21730 NONE
        serS 4457210 .. 4457235 + -17.7  -2.59431   GCTCGTTGCTGACGA         CAACGCCATGG CATG CCATGGCGTTG          TGCATTCTGGGCCCG  86 43
 JC965_21740 NONE
        purF 4459429 .. 4459450 + -17.3  -3.07816   CAGCGTGATGAACAA           CAGGGGGGC CTCG GCCCCCCTG            TTGCATGGATGCGCC  89 56
 JC965_21765 NONE
 JC965_21770 4464267 .. 4464293 + -10.8  -5.32882   GGGGCTTGCAATAGA         AAGAGGGAGGCA TCA TGCCTCCCTCGA         TTTTTTGTCCTGATA 100 181
        tusD 4464786 .. 4464802 +  -2.1  -3.28712   AAGCCGCACTGACCG              CTGATCG CTT CGTACAG              TTCTAGGGGGACAAG  44 3
        tusC NONE
        TusB 4465442 .. 4465466 +  -3.5   -5.2197   CGAGCACGGATCACC          GCAGACCTGGG GCG CTTAGGTTTGG          TTTTTCCTTTTTATC  83 7
        rpsL NONE
        rpsG 4466586 .. 4466615 +  -8.5  -4.04174   TCCGCTGGTAATCCG       CTTGCGCAGGGTC TTCT GACTCTGCGCACC        TTTAATTATCTGGGG  73 30
        fusA 4468773 .. 4468794 + -15.9  -3.59979   AGTAATTTAAGATTC           CCCGCCTAC GACG GTAGGCGGG            TTTAACCTAGAAGGA  91 36
 JC965_21810 4470289 .. 4470320 + -24.6  -4.09864   ATGGCGCATTAAAAA      GAGAGGGCCTTGCC AGGT GGCAAGGCCCTCTC       TTTTGGGGCATCACT 100 57
        queF 4471895 .. 4471938 +  -4.6   -3.7282   TCAGTAAACTCTGGA CGG-GCGGGGGTG--GGCTTG GATAA CATGCCTGCACCTCCGTGCCG TTCTTAATCCAATGA  57 87
 JC965_21825 NONE
 JC965_21830 4475884 .. 4475912 +  -5.9  -2.71791   TCCAAGCACTCCGGC        CGGGATCAGGTCA ATC TCGCCTGAATCCG        CTTTGAGGGGCGGCT  48 2
 JC965_21845 4478467 .. 4478498 +  -7.3  -3.21747   GTTTTCATCCCCCCT     CGTCATCGACCCCGC CCGT GCGGGGTC--TGCCG      TTCGTGATGCAGTGA  59 48
 JC965_21850 4479681 .. 4479699 + -11.7  -5.38958   ACCCGGTGCAAAAAT             GTGGCCC CAAGC GGGCCAC             TTTTTATTTCTAACT 100 52
 JC965_21855 4480811 .. 4480828 +  -9.8  -3.86015   GAACCTTGATCGACA             CGGCCC CCTTGC GGGCCG              TTTCTGACAGGGGTG  75 32
 JC965_21860 4481783 .. 4481799 + -13.7  -5.08255   CATTCCAATCAACAA              GAGCGCC ATG GGCGCTC              TTTTGTTTTGGAACT 100 49
 JC965_21875 NONE
 JC965_21880 4484814 .. 4484838 +    -5  -4.84359   AGCCTTGAGCCCATG         GCGGG-CATTG CCTA CAATGACCCAC          TTTTTATCACACTCA  76 74
 JC965_21885 4485158 .. 4485176 + -11.7  -3.52113   TTTGTTATTTCAAAG             CACCGGC CAAGC GCCGGTG             TTCTGCGTTTTGGGC  75 77
 JC965_21900 4487320 .. 4487338 +    -3  -3.68256   GAGGGGCGCCATCGG             GATAACCG GAA CGGTTCAC             GTTTTTTCATCGGGA  50 39
 JC965_21905 4488652 .. 4488676 + -14.4  -5.46276   TCTGCTGTAGGACAA          TCCGGAACCA ATCAC TGGTTCCGGA          TTTTTTATGTCTATT 100 118
 JC965_21945 4495664 .. 4495694 +  -8.4  -3.14564   CAATAGGCTCATTTA       GTGAGCCGAT CACCCCGACCA ATCGGCTCAC       TTGATGAGCCGATAA  58 73
 JC965_21985 4505108 .. 4505127 +  -6.4  -2.66316   TCGAACCGTTCCGTT            CCTCTGCA CCAC TGAAGAGG             TGATGTCATGAGCGG  48 69
 JC965_21990 4506470 .. 4506501 + -18.8   -3.8211   CTCCCTCTAATGGAA      CAAGCCCGAACAGG TGCA CCTGATCGGGCTTG       TTGTTGTGCCTGACG 100 58
 JC965_22035 4513654 .. 4513678 + -14.3  -4.99435   TGGCTTGCAATAGAA          AGAGGGAGGCA TCA TGCCTCCCTCA          TTTTTGGTTCTTCGC 100 190
 JC965_22050 NONE
 JC965_22055 4518833 .. 4518846 +  -3.9  -3.30124   AGCGCCGTCAGACCA               GAAAA GAGA TTTTC                TTGTCCCGCATGGAG  48 314
 JC965_22105 NONE
 JC965_22110 4528299 .. 4528321 + -12.8  -4.62783   TAGATTTTCTCAAAA           CCCAAGTGAT GAT GTCACTTGGG           TTTTTGAGGTCGGTA  95 38
 JC965_22160 NONE
 JC965_22165 4538041 .. 4538094 +  -6.5  -2.82015   CGATCCGCTCGTGAT GGTTGGCGGCCACCTCCAGCATGAT GGGG GTGATGCCGGCGGTGGCGGCCAGGA TGTCGTGGCTGTGGA  49 477
        rsuA 4539677 .. 4539707 + -15.4  -2.52082   CTGTCCGGCGCGGGG       GAGCATCGGCGGCT CAG AGCCGCCGATGGGC       GTGTTGGTCCTTCCT  80 61
 JC965_22185 4542618 .. 4542641 +    -8  -4.28375   GGTGGGAGGGGAATT          TCGCCGGGGC GTCA GCCCCGCTGG           TTTTGAATGTATTGC  77 68
 JC965_22220 4545746 .. 4545763 +    -4  -4.08939   TTGATGATGATCGGG             TGCCGG TTCACC CCGGCC              TTTGTCTCCCTCTTC  60 219
        dauA 4547650 .. 4547672 +  -4.1  -3.38072   TTACATTACGCCCCG          TTC-CAGCGC AACG GCGCAGCGAA           TTCGTGTTGGCTGAA  50 144
 JC965_22230 4547897 .. 4547915 + -13.2  -5.42514   CACCGCCAAATATAA             CCCGTTGA ATT TCAACGGG             TTTTTTCATTTCTAG 100 33
 JC965_22235 4548911 .. 4548948 +  -2.8  -3.78953   TTGAACACCTTGTTC  GTGT-GGCAGTGCCCGTT GAGA AACGG-CACTGACAACAG   TTTCATCCTGAGCAT  54 463
        tnpA 4554381 .. 4554391 +  -2.4  -3.71917   TCCCACCTACGTCGG                 AGGG AGT CCCC                 TTTCGCATTTAAGAT  51 60
 JC965_22275 NONE
 JC965_22280 NONE
 JC965_22285 4558147 .. 4558173 +   -21  -2.95106   GCGATGCACCAACAC         GAAGAGGGAGCC CAT GGCTCCCTCTTC         TATGCTTGCCTTCTT 100 44
 JC965_22290 4559225 .. 4559256 + -13.9  -4.79667   GAGCGCCCAGGGGCG      TAATGCCAGTCAG TTAAGC CTGACTGGCATTG       TTTTTACTAGGTTTT 100 65
 JC965_22320 4564365 .. 4564377 +  -4.7  -3.31792   CGAGACACCGCCCAG                GCCAG CCC CAGGC                TTGTCAGGGTGCTGC  49 73
         alr 4567421 .. 4567452 + -23.2  -4.87803   CCAGCCCTTGATAAA      CAAAAGGCCCCGTC TTTC GACGGGGCCTTTTG       TTTTATTTGGCGGTG 100 78
 JC965_22350 NONE
 JC965_22355 4569951 .. 4569964 +  -6.7  -3.17714   TGACACAGGAAAAAT               GAGAC GATC GTCTC                TTGATCCCACTTTCC  54 60
 JC965_22375 4575290 .. 4575302 +  -9.1  -3.19668   CCGGCGCTGCGCGCT                CGACC ATC GGTCG                TTGGCTTCGGTGGTA  63 468
 JC965_22400 4579191 .. 4579210 +   -15    -5.055   TCCACATGTAAAAAA            CGGCCAGC TTAT GCTGGCCG             TTTTTTAAACATTAA 100 46
 JC965_22405 NONE
 JC965_22410 NONE
 JC965_22415 4582594 .. 4582607 +  -5.2  -3.40522   GCTTTGGCGTGGAGG               GGGC CTATCC GCCC                TTCTCATGGACCGAT  54 125
 JC965_22455 4591335 .. 4591365 + -19.8  -3.56643   AGCTATGCAGATAAC       ACAACAGGGCAGCC ATG GGCTGCCCTGTTGA       TTTGGGGGATGTCAC 100 490
        rluF 4594349 .. 4594378 + -16.5  -3.85698   TTCCCGCACCCTGAT       GAACAACACCGGC CAAG GCCGGTGTTGTGC        TTTCTGGCCCCCAAG 100 51
 JC965_22480 4595718 .. 4595749 +   -21  -3.86524   CCGACGGACCCTGAT      C-ACAACGCCGGCGC ACT GCGCCGGCGTTGTCG      TTTCTGCCCCGGTCT 100 105
 JC965_22485 4596710 .. 4596726 + -15.1   -2.7419   GTTCGGTTGAGGGCG              GGGCGGC CAG GCCGCCC              TGCTTGACGTGCTCT  81 31
 JC965_22490 NONE
 JC965_22495 4600076 .. 4600086 +  -8.2  -3.14132   CGCGGGCAAAACGGT                 CCGC CGA GCGG                 TTGGTGCCGGGCAGC  60 184
 JC965_22515 4602505 .. 4602525 +  -7.5  -2.57244   GGGTCAGCTTGTCGC            TAGTGGTGC CCC GCGCCACGA            TCAGTTCGTCGATGG  51 245
        rfbC NONE
 JC965_22545 4606938 .. 4606954 +  -5.2  -2.53012   AGTAAAAAGGTCAGG              TGAGAT AACAA ATCTCA              ATTAATACTAAAGTT  46 23
 JC965_22550 4608225 .. 4608235 +  -2.4  -4.60889   CATGAGTCATCAGCT                 CACC TTC GGCG                 TTTTTCAAGATAGTT  65 176
 JC965_22590 NONE
 JC965_22595 4617488 .. 4617515 +   -17   -2.9348   TGACCTGATCCCCGT        TGCCATGGCCGC CCCT GCGGCCATGGCC         TCTGTGCCCTTTCAC  89 33
         cdd 4618608 .. 4618631 + -16.8    -3.322   GGCATCCACCAACGG          GAAGGGGAGC TGCG GCTCCCCTTC           TTGCTCTCTGCGGCT  90 45
 JC965_22610 4619969 .. 4619980 +  -3.6  -2.79831   GTTTATAGTGAGATG                CTCG GGAG CGGG                 ATATTTTACAGTAAG  43 66
 JC965_22615 NONE
 JC965_22620 NONE
 JC965_22625 4623138 .. 4623150 +  -3.5  -4.10164   CGATTCGCTTGCATC                TTATT AAA AATAA                TTTCTATGATGGTAA  60 55
 JC965_22640 NONE
        tnpB 4624729 .. 4624756 +  -4.2  -2.60888   ATCAGAGCTTGCACC        GATGCG-CGAG GGCGATG TTCGTCGCATC        ATCTTCTCTCGTGAT  43 64
 JC965_22650 4626763 .. 4626797 +  -2.7  -3.61398   CATAAACGGCCAGAC    GGTCCCGGA-TGCCGA TGAC TCGCCGGTCCAGGTCC     TTCTTGGCCGCACCG  49 450
 JC965_22665 4629610 .. 4629644 +    -7  -4.21933   AATCTAAAAAATAAC     AAGGGACTGCAAACGC GCT GCGCTTTCAGTCCCGC     TTGTTTTAAGATTAC  71 225
 JC965_22695 4634560 .. 4634571 +  -2.2   -4.8487   TGCCCTGGCCTGAGG                GAGG TAGA TCTC                 TTATTTTTTTCCTAG  72 155
 JC965_22700 4635965 .. 4635979 +  -5.7  -2.92157   GTGCGCAGCCGCACC               GTCGA AAACG TCGAC               TCTATCGGGTTGGTC  51 204
 JC965_22745 4644103 .. 4644114 +  -2.2   -2.7186   AATGGCGAAGAAACG                GTCT AAAT AGGC                 TGATTCAAGGCATTT  38 61
 JC965_22750 4648190 .. 4648215 +  -7.6  -2.55351   GCCGTGGGTGCATCG         GCCGGC-ACCT TGCGC AGGTTGTCGGC         GTTCATCTCACGCAG  53 474
 JC965_22770 4651953 .. 4651982 +  -2.9  -4.07568   TTCAGTATCTCGACA       GGGATAACTTA CTTTACCA TCGGTTATCCC        TTTTAGCCGCACAAA  58 46
 JC965_22805 4659509 .. 4659545 +  -3.7   -3.8221   AGCGGGGCGGGTTGA   GA-GGGCA-CAGGGTGG CGCGT CCACCCGGGTGCCAGTC   TGTTTTCCCTTTTAT  55 42
 JC965_22810 4660278 .. 4660301 +    -8  -4.28375   GGTGGGAGGGGAATT          TCGCCGGGGC GTCA GCCCCGCTGG           TTTTGAATGTATTGC  77 437
 JC965_22855 4668216 .. 4668238 +  -4.7  -3.05844   GCCGAGCTGCTCGAA           GAAGGGACG GATAG CGGCCCTGC           TGTTGCCGTGCCCCA  47 314
 JC965_22875 NONE
 JC965_22880 NONE
 JC965_22885 NONE
 JC965_22890 4670869 .. 4670883 +  -9.2  -2.89793   GCTCGGCGTTAAATC               GTGGGG CAG CCCCGC               TACTTCTATCACTCA  61 155
 JC965_22910 4674023 .. 4674050 +  -4.6  -3.90922   GGAAACTTCCCATCA        TGGGTCAGGCCC TCTT GGGCCCACCCCG         TTATTTCGGCAGGAT  59 50
 JC965_22915 4675997 .. 4676028 +  -9.4  -4.07687   CCCCTTTTTTGCGGT      TCATCGCGGCTTTC CGGG GAAGGCCGCCTTGA       TTTTCAGAAAAAAGT  75 83
 JC965_22935 4678275 .. 4678288 +  -8.1  -4.25104   CGGGCGGCCAGGGGT               CAGGC CAGG GCCTG                TTTTGGTACCACGGC  77 43
 JC965_22970 4680825 .. 4680835 +    -4  -2.71712   TCTCGCCCGACTCTC                 CTAT TAA ATAG                 CTTTACGCCGCGACC  42 237
 JC965_22995 4684694 .. 4684718 + -11.6  -3.15996   TATTCTGGTAATTAA          GTATGAGCAA TTCAC TTGCTCATAC          TCTTAGTACATAATG  71 354
 JC965_23005 4685851 .. 4685874 +  -8.2  -3.16191   ATAATTGATTTCGCA          GATGCCCT ATTTATTA AGGGCATC           TTCATGGGACTATGA  60 33
 JC965_23010 4686280 .. 4686290 +    -4  -3.96932   CTCTTCTATAAGAGG                 TTGA TCC TCAA                 TTTATCGGTATGTAT  58 30
        tnpA 4691008 .. 4691025 +  -7.7  -3.02144   GGCGCCAGAAGCAGC             GGGT-GCG TAG CGCCACCC             TGTTCACCACCCTGC  56 346
 JC965_23060 4692204 .. 4692221 + -12.7  -4.70169   CCCCCAGAGATACAA             CCAGCCC GGTC GGGCTGG              TTTTATTGCCTGTGC 100 51
        ybcJ 4692791 .. 4692827 +  -2.7  -3.16564   GGCCTCGTCGCCGTT    GCGCGACGGGCAGGTGG CCA CCACCTGGATGGGGCGG    TTGATGCGCTGACCG  43 239
 JC965_23085 NONE
 JC965_23090 4697017 .. 4697028 +  -4.4  -3.31792   AGCATCCACGCCGCC                TACC TGGA GGTA                 TTATGAGACTCATCA  49 8
        tnpA 4709931 .. 4709941 +  -2.4  -3.71917   TCCCACCTACGTCGG                 AGGG AGT CCCC                 TTTCGCATTTAAGAT  51 60
 JC965_23175 NONE
 JC965_23180 4711151 .. 4711176 + -20.5  -2.72049   GGCGGACAGCAATGA         CAACGGGGGGC CTGG GCCCCCCGTTG          TCATTGGCAGCTGTC 100 55
 JC965_23210 4716342 .. 4716352 +  -8.2  -2.62184   CTATCACCCAGTAAT                 GGGG ATC CCCC                 TCCTGTGACGCGAAG  56 27
 JC965_23220 4717892 .. 4717902 +  -4.6   -3.5032   CGAAACGGCTTTAAT                 GCTC AAG GGGC                 TCTTTAATCTACCCC  52 237
 JC965_23230 4719154 .. 4719165 +  -2.2   -2.7186   AATGGCGAAGAAACG                GTCT AAAT AGGC                 TGATTCAAGGCATTT  38 61
 JC965_23265 4723763 .. 4723798 +  -2.4  -3.36273   TATTCGCGCTCGTTT    TGCGAGGTGCTGACCG GTCG CAGTCAACACCATACA     TTCATCTTAAAAGAG  44 129
        rplY 4724134 .. 4724157 + -18.2  -4.85782   GAACTTTCCTGTGAA          GAGGCCACCC AATC GGGTGGCCTC           TTTGTTTTTACAGCA 100 49
 JC965_23290 4727056 .. 4727066 +  -2.4  -3.61517   TCCCTCAACAAAGCC                 GGGG ATC CCCA                 TTCTTCCAAAAGCGT  48 214
        rimO 4738198 .. 4738220 + -17.8  -5.21709   CCACTCCCCCTCAAA           GCCAGTCGGT CTC ACCGACTGGC           TTTTTTAATGTCCGC 100 46
 JC965_23340 4738518 .. 4738528 +  -8.2  -2.62184   CTATCACCCAGTAAT                 GGGG ATC CCCC                 TCCTGTGACGCGAAG  56 27
 JC965_23345 NONE
 JC965_23350 4739833 .. 4739843 +  -4.6  -3.54129   GAGCGTCTATCCTAC                 GCTG ACG CGGC                 TTTCAGGGCGATCTA  52 275
 JC965_23370 NONE
 JC965_23375 4742012 .. 4742031 +  -8.6  -3.48772   CCATCTAGCGATGAA            CTGGAGAT CGCA ATCTCCGG             TTATCTAACGACGTT  64 99
 JC965_23380 NONE
 JC965_23385 4743115 .. 4743128 +  -3.9  -3.30124   AGCGCCGTCAGACCA               GAAAA GAGA TTTTC                TTGTCCCGCATGGAG  48 124
 JC965_23405 4745927 .. 4745937 +  -2.4  -4.71482   GCGTATGGCAACTGC                 CCCG CAG CGAG                 TTTTTCACATTTCCT  69 107
 JC965_23445 NONE
 JC965_23450 NONE
 JC965_23455 4757368 .. 4757390 + -12.8  -4.62783   TAGATTTTCTCAAAA           CCCAAGTGAT GAT GTCACTTGGG           TTTTTGAGGTCGGTA  95 38
 JC965_23465 4759139 .. 4759163 +  -7.2  -2.68338   GGCTCATGCTTGCCT          TGTCGGGTTT AATTG AAAACCGACA          TCCGTTTGACTTGCT  53 111
 JC965_23470 4760077 .. 4760108 + -13.9  -4.79667   AGGAGCCCATGGCTC      TAATGCCAGTCAG TTAAGC CTGACTGGCATTG       TTTTTACTAGGTTTT 100 66
 JC965_23480 4762538 .. 4762558 +  -5.3   -3.9941   CTGACTGATGCACAA            TGGGGGCTT ATC GAGCCCCAG            TTTCCTTCTCGAAGC  62 282
 JC965_23490 NONE
 JC965_23495 4764272 .. 4764287 +  -4.6  -4.25104   CTTTCCCATGAAATC              CGGCAG GGTG CTGCCA               TTTTCCTGCCAAAGA  65 78
 JC965_23540 4770072 .. 4770086 +  -4.2  -3.86822   GGCTTTGCCGTACTC               GGCC TGATGAT GGCC               TTTATCGGCGGCTTC  59 116
 JC965_23545 4771784 .. 4771810 + -11.5   -4.9725   CTTTGATATCTTCAC         CGCCCTGGGTC TCGAT GGCCTGGGGCG         TTTTTCTATGAACAT 100 139
        tnpA 4775811 .. 4775839 +  -7.2  -3.01712   CCAGCGTAAGCGGGA        GGTGAGCTGCGC CAGCT GCGCTGCCCTCC        TCTTCGGCGAGCGGG  56 213
 JC965_23605 NONE
 JC965_23610 4781520 .. 4781543 +    -8  -4.28375   AGGTGGGAGGGAATT          TCGCCGGGGC GTCA GCCCCGCTGG           TTTTGAATGTATTGC  77 132
 JC965_23620 4782986 .. 4782999 +  -3.7  -4.27617   TCGCGTTCTGTCCCG               GCGTG ACAA CCCGC                TTTTGCTGCGCTCTG  66 450
 JC965_23630 4784655 .. 4784665 +  -2.4  -3.71917   TCCCACCTACGTCGG                 AGGG AGT CCCC                 TTTCGCATTTAAGAT  51 302
 JC965_23640 4786231 .. 4786253 + -19.2  -3.63627   ACTTGCCACCATGAA           GAAGCCGCCC ATT GGGCGGCTTC           TTTGCAATGTGCGCG 100 60
 JC965_23655 4788704 .. 4788716 +  -5.5  -4.09685   TCACCGCGCTACCAC                TGGCA ATA TGCCG                TTTTGCCCAATCAGC  65 354
 JC965_23670 4790167 .. 4790177 +  -4.6  -3.08344   CCGTCAGCCAAGCAG                 CCGG GCA CTGG                 TATATCTCCTTTCAG  47 112
 JC965_23735 4801563 .. 4801602 +   -21  -3.62224   GGCTTCGGCAGGCCA  CAATAAAAAACCGCAGCC CAAG GGCTGCGGTTTTTTATGG   TTCTTCGCGGGATCT 100 182
 JC965_23760 4803845 .. 4803859 +  -8.5  -2.75064   GCAGCGACCCCTATG               CCGCC ATCGA GGCGG               TGATTCCCTGGGACG  57 463
 JC965_23795 NONE
 JC965_23800 NONE
 JC965_23805 4809372 .. 4809389 +  -6.9  -3.53012   CGCGCTGCCAATCAG             CGTCAGC GCCA GCCGACG              TTTGACCAGCAAGGC  58 395
 JC965_23815 4810952 .. 4810968 +  -8.7  -2.81045   CACAAAGATAGAGAT              GCTGCAC TTG GTGTAGC              TGCTGTTATGCATCA  60 67
 JC965_23820 4811393 .. 4811407 + -11.4  -3.38991   AGATTTACTAAACAT               GAGGGC TTA GCCCTC               TATTATTACAGAAAT  75 30
 JC965_23860 4818826 .. 4818849 +  -2.3  -4.41137   TTTCAAAAATTAAAA          ACCACCCAC CATATA GTGAGTGGC           TTTATTATCGTTATG  63 161
 JC965_23870 NONE
 JC965_23875 4821152 .. 4821168 + -13.7  -3.54488   AGATTTACTAAACAT              GAGGGGC TTA GCCCCTC              TATTATTTACAGAAA  84 30
        istA 4833992 .. 4834002 +  -2.4  -2.78018   CAAGCCTGTCAGCAG                 GGGC ACA GCAC                 TCGTTACTACCGGCT  39 418
 JC965_23960 4839487 .. 4839504 +  -6.9  -3.28745   AAGGAGGTGATCCAA             CCCCAGG TTCC CCTAGGG              TTACCTTGTTACGAC  56 293
 JC965_24080 NONE
 JC965_24085 4855687 .. 4855703 +    -5  -2.90075   CCCTTCAACCCGAAT              GCCCTC CCCCT GCGGGC              TATGCTTGACGGGAA  48 312
 JC965_24095 4856053 .. 4856078 + -18.3  -4.18494   GCCAAAATGAAACAA         GGCCCTCGCCA TCAC TGGCGGGGGCC          TTTTCACTGCGGATG 100 93
 JC965_24150 4865334 .. 4865355 +  -8.8   -5.0916   TGGAGAAAATCCCGG           GTGATCAC CCCTAA GTGATCAC            TTTTTGTGTTACAGG  91 12
 JC965_24155 4866352 .. 4866362 +  -5.4   -3.1634   AGATGCCGACCTGCT                 CTAC AAG GTAG                 TTCGCTCCTTTGCCA  50 15
 JC965_24160 4866916 .. 4866928 +  -2.6  -4.72986   TACCCGTGTATCTGA                CGGC TCCTT GCTG                TTTTTGATGCACCTC  69 6
 JC965_24165 NONE
 JC965_24170 NONE
 JC965_24175 4868490 .. 4868500 +  -8.2  -3.18264   CCTTGCCACCGCACG                 CGCC ATT GGCG                 TTCATCGCTCCACCC  60 180
 JC965_24230 4877217 .. 4877231 +  -7.8  -3.48593   AACCACCTGGCCACG               CGCCAG CGG CTGGTG               TTGTCTACAAGAGTC  61 428
 JC965_24235 4878120 .. 4878134 +  -4.2  -3.28712   GAACTGGATATGCCC               CGGTTG AAA CAACAG               TTGTCACAGACGCCG  49 64
 JC965_24240 4878724 .. 4878741 +    -4   -3.5936   ATTGTTGGCGTTGAA             CAGCGC GTTGCA GCGCGG              TTTGCAGGATTTGCA  52 27
 JC965_24245 NONE
 JC965_24250 4879532 .. 4879568 + -10.1  -2.96695   ATCAATCGGCAGAGC    TGGCTGGTGCTTGCTCC CCA GGAGCGACCATGAGCCG    TAGTTTGATCGCCGC  65 91
 JC965_24255 4880220 .. 4880234 + -11.4  -2.93723   CTTCGCAGCCGTCTT               GGGCCA GCG TGGCCC               TGTGGTTGATGCCCG  70 2
 JC965_24260 4880650 .. 4880662 +  -4.7  -2.74144   ATGCGCTCACCCTTC                CGCTG AGC CTGCG                CTTTCGCGATGAGCA  44 247
 JC965_24265 NONE
 JC965_24270 NONE
 JC965_24275 4884584 .. 4884594 +  -5.4  -4.22748   GAAATTCTTCTCGAC                 TGAC TCA GTCA                 TTTCATTTCTTCATG  67 23
 JC965_24330 4895188 .. 4895208 +  -5.3   -3.9941   CTGACTGATGCACAA            TGGGGGCTT ATC GAGCCCCAG            TTTCCTTCTCGAAGC  62 336
 JC965_24340 4896821 .. 4896834 +  -6.7  -3.17714   TGACACAGGAAAAAT               GAGAC GATC GTCTC                TTGATCCCACTTTCC  54 409
        istB 4901759 .. 4901787 +  -4.6  -3.21622   TCCTGGGATATCACC       TACTTGCCGT-CA CTCG TGCGCGGCCAGTA        TTACTACCTCTATCT  49 420
 JC965_24380 4903703 .. 4903713 +  -2.4   -3.6849   GCTTATGACAACTGC                 CCCG CAG CGAG                 TTCTTCACATTCCCT  48 384
 JC965_24405 4907957 .. 4907971 +  -7.8  -3.48593   AACCACCTGGCCACG               CGCCAG CGG CTGGTG               TTGTCTACAAGAGTC  61 428
 JC965_24410 4908860 .. 4908874 +  -4.2  -3.28712   GAACTGGATATGCCC               CGGTTG AAA CAACAG               TTGTCACAGACGCCG  49 64
 JC965_24415 4909464 .. 4909481 +    -4   -3.5936   ATTGTTGGCGTTGAA             CAGCGC GTTGCA GCGCGG              TTTGCAGGATTTGCA  52 27
 JC965_24420 NONE
 JC965_24425 4910272 .. 4910308 + -10.1  -2.96695   ATCAATCGGCAGAGC    TGGCTGGTGCTTGCTCC CCA GGAGCGACCATGAGCCG    TAGTTTGATCGCCGC  65 91
 JC965_24430 4910960 .. 4910974 + -11.4  -2.93723   CTTCGCAGCCGTCTT               GGGCCA GCG TGGCCC               TGTGGTTGATGCCCG  70 2
 JC965_24435 4911390 .. 4911402 +  -4.7  -2.74144   ATGCGCTCACCCTTC                CGCTG AGC CTGCG                CTTTCGCGATGAGCA  44 247
 JC965_24440 4912181 .. 4912197 +  -4.3  -2.79915   AACTGCCTGTTCGCC              GCGTCGA CTG TCTGCGC              TGTGGTCGCGTCAGT  44 315
 JC965_24485 4921525 .. 4921538 +  -5.3  -3.34043   TTCAATGAGCAGCAT               GAGAT CAGG ATCTC                TTGTAAGCTCCTCAC  52 456
 JC965_24510 NONE
 JC965_24515 4927535 .. 4927554 + -13.6  -4.41956   GGAGCCATCTTCTAA            GCCCAGTC TCAG GACTGGGC             TTTTCGTATCTGTCT  95 34
 JC965_24540 4929744 .. 4929756 +  -5.5  -4.09685   TCACCGCGCTACCAC                TGGCA ATA TGCCG                TTTTGCCCAATCAGC  64 272
 JC965_24555 4930692 .. 4930702 +  -3.2  -3.93367   TAGCAAAGTAGGACT                 CTAC TAT GTGG                 TGTTTTCTTAACACA  56 109
 JC965_24580 4934694 .. 4934704 +  -2.4  -4.62336   TGAGCAACGCTTCAA                 TCCG CTC CGGC                 TTTTTCAGGTACAGT  68 336
 JC965_24615 4940050 .. 4940077 + -14.4  -4.68384   TTGCTAACAAGAATG        CAGAGTTAAGAA CTGA TTCTTAACTCTG         TTTTCTTCGGTCACT 100 50
 JC965_24630 4942632 .. 4942659 + -14.4  -4.68384   TTGCTAACAAGAATG        CAGAGTTAAGAA CTGA TTCTTAACTCTG         TTTTCTTCGGTCACT 100 50
 JC965_24635 NONE
         rrf 4945993 .. 4946012 +   -15   -5.4833   ACCCAATACAAGAAA            CCCCGCTC ACTC GAGCGGGG             TTTTTTATTGCCTGA 100 41
 JC965_24645 4947128 .. 4947155 + -12.2  -4.68384   CGCAGCTCAAGAATA        CAGACATAAGCA GTCA TGTTTATGTCTG         TTTTCTTCGGTCACT 100 49
 JC965_24650 4948642 .. 4948680 + -14.8  -3.86015   AATACTTTTATATAA   GATAATCTGATATCGGGA TTG TTCCGATGTCAGACTATC   TTTATAAAGAAGATA  95 61
 JC965_24695 4954861 .. 4954888 + -14.4  -4.64676   TTGCTAACAAGAATG        CAGAGTTAAGAA CTGA TTCTTAACTCTG         TTTTCTTCGGCCTAG 100 50
 JC965_24705 NONE
 JC965_24710 4958286 .. 4958336 +  -9.9  -3.59627   GTACTGTATTTGTCA GAAGACAAAGCCATGAGTTGAAC ATNTN GTTCAATGTATGCCTTTGACTTC TTTACGAAGTTTGCT  72 45
 JC965_24715 4960163 .. 4960201 +    -9  -4.07568   CGGCTCAAGGCCGAA   GAAAACAGACATAAACAT GTG ATGCTTATGTCTGCATTC   TTTTAGCAAGAAGAG  75 457
 JC965_24750 4965430 .. 4965447 +  -9.1  -3.20361   TATGGCACTGAGGCT             CAGTGCG AAAA CGCGCTG              TTCACTTGGCGTTTT  63 460
 JC965_24840 4979300 .. 4979316 +  -2.3  -4.63179   CAAACTCATTCACAT              GTATATA ATT TATATCC              TTTTCATTCTTGTTT  65 474
 JC965_24855 4981314 .. 4981331 +  -5.5  -4.60889   CCCGGTGAGACCACA             CGCCG TAGCTACC CGGCG              TTTTTCAAGATAGTT  73 153
 JC965_24965 5000338 .. 5000352 +  -4.2  -3.61398   TGACCCAAGGCACCT               TGGTCG ATG CCACCA               TTATTGAGGCACCCA  54 491
        istB 5006109 .. 5006128 + -13.6  -4.46926   CCCGGAAAAACAAAA            GGCCATCC GCGA GGATGGCC             TTTTGTCATGGAATC  95 311
        tnpA 5014246 .. 5014256 +  -2.4  -3.55071   TCCCACCTACGTCGG                 AGGG AGT CCCC                 TTTCGCANCATCTCG  48 60
        tnpA 5022103 .. 5022115 +  -9.1  -3.19668   CCGGCGCTGCGCGCT                CGACC ATC GGTCG                TTGGCTTCGGTGGTA  63 232
 JC965_25205 5033237 .. 5033270 +  -5.9  -4.13767   TTCTGGGGCGGTTTG     AGGGCCGGATCC-TGC GGG GTATGGTTTCGGCCCG     TTTTGGCATCCAAGA  66 186
 JC965_25305 5048024 .. 5048036 +  -3.3  -2.77043   CCAGCATCCGGGCCA                AGGTG GAG CACCC                GTTTCGCATCATCAA  41 241
 JC965_25335 5051723 .. 5051733 +    -4  -2.71712   TCTCGCCCGACTCTC                 CTAT TAA ATAG                 CTTTACGCCGCGACC  42 235
        tnpA NONE
 JC965_25385 5058375 .. 5058392 +  -9.1  -3.20361   TATGGCACTGAGGCT             CAGTGCG AAAA CGCGCTG              TTCACTTGGCGTTTT  63 161
 JC965_25400 5059328 .. 5059339 +  -5.8  -3.54029   GTCCTGAACAATGAC                TCCG AGTA CGGA                 TTATCGTTGCTGACC  56 115
 JC965_25420 5063183 .. 5063198 +    -9   -3.1247   TCAGCCTTACTCCGC              TGCACC TTCT GGTGCA               TTCAGTGTCGGGGCT  63 164
 JC965_25460 NONE
 JC965_25465 5070026 .. 5070036 +  -2.4   -3.6849   GCTTATGACAACTGC                 CCCG CAG CGAG                 TTCTTCACATTCCCT  48 189
        tnpA 5071529 .. 5071556 +  -4.8  -3.38522   GGGCGGGAACGTTAT        CCTGAAGACCAT TGGC ACGGTTTACAGG         TCTTTGCCATCGATG  52 220
 JC965_25525 5077956 .. 5077989 +  -3.1  -2.92562   TGCGCGCAGGCGGGG     TCC-CCGAGCCATC AGTGGAG GGGGGCTTGGAGGA     GTTATTGCTGTTTTG  42 423
 JC965_25545 5079210 .. 5079230 +  -7.6  -3.16668   TCCAGTTGCCGAAGA           TGAC-GCCC ATCA GGGCGGTCA            TTCATCGAGATATTA  57 202
 JC965_25550 5079932 .. 5079952 +  -5.5  -2.58249   CTGTTAAGCATACGG            TGTAGTTTA TTA TCAACTACA            GTTCTACAGCGTATG  46 21
 JC965_25555 5080183 .. 5080203 +  -3.4  -3.20723   GGGATCAGGTTTCTT           TGAA-TGAG ATGT CTCAGTTCA            TTAACTTCCTGAAGA  43 19
 JC965_25560 5080800 .. 5080810 +  -2.4  -3.05562   GGACTGACGTCGGTA                 AGCC ATT GGCC                 TATTCAACGGTTTAT  42 148
 JC965_25565 NONE
 JC965_25570 5081756 .. 5081768 +  -3.3  -3.38046   TGGCAGCTGACTGAC                CACGA CCG TCGAG                TATTTCCCGTACCGA  48 248
        tnpA 5085214 .. 5085233 + -11.4  -3.40141   CTATGGCACTGAAGC            GCAGTGCG AAAA CGCGCTGC             TTGCTTGGCGTTTTC  75 225
 JC965_25670 5097382 .. 5097405 +  -2.3  -4.41137   ATTTCAAAAATTAAA          ACCACCCAC CATATA GTGAGTGGC           TTTATTATCGTTATG  63 158
 JC965_25730 NONE
 JC965_25735 5104162 .. 5104178 + -10.1  -3.09933   TGGCCGAAGGGGTGG              CGGGGCT GCA AGCCCTG              TTCGATCGCTTCGAA  66 178
        tnpA 5121639 .. 5121657 -  -4.4  -3.69216   GGGCCATCGAAAATA             GCCTGCAC TGG GTGCTGGA             CGTCACGATGGGCGA  54 330
 JC965_25865 5120889 .. 5120906 -  -3.3  -3.35046   TGACGGGCTCAAACA             CCGTGCC GTCT GACAGGG              TTGCGAGCTTGGCGA  46 50
 JC965_25850 5118718 .. 5118728 -  -4.6  -3.50588   AGGGTAGATTAAAGA                 GCCC CTT GAGC                 ATTAAAGCCGTTTCG  52 135
 JC965_25840 5117324 .. 5117339 -  -3.2   -2.7782   GAAGGTGCGAATAAG              CGGGAA ATTC TTCTCG               GCTGACTCAGTCATT  41 138
 JC965_25835 NONE
 JC965_25830 NONE
 JC965_25825 5113687 .. 5113705 -  -3.8  -3.38178   CAAGTAAGTCGATAA             GGTCTTAC TAC GTAAAGCC             AACTGACTGATCACC  50 245
 JC965_25815 5112186 .. 5112196 -  -2.4  -2.76686   AGGGGATACAAAGAT                 GGCC TGA GTCC                 CTACCAACGGTTGGC  39 44
 JC965_25810 5111772 .. 5111787 -    -4  -2.80816   CCCGCATGGAGCAGA              TTCTGC CATG GCAAAA               CATGGTGTGTACAGA  43 87
 JC965_25750 5106313 .. 5106323 -    -4  -2.71712   GGTCGCGGCGTAAAG                 CTAT TTA ATAG                 GAGAGTCGGGCGAGA  42 235
        tnpA 5100909 .. 5100919 -  -6.8  -2.52464   CCGTTCGCTAACCCA                 GCAC AAG GTGC                 TCGGTCCGATGTCAG  50 52
         rrf NONE
 JC965_25635 5090999 .. 5091030 -  -2.2  -2.91395   AGCCGCTCGATAAAG      CCGT-TGCTCTGC GNTAGTG GCGGAGCGGACGG      GACTCGAACCCGCGA  41 11
 JC965_25620 5089058 .. 5089069 -  -7.2  -3.54129   GATACTGTCGGTAAA                GCCG ATGG CGGC                 GCGGTTCATCTTGCT  61 172
        tnpA 5078297 .. 5078341 - -11.4  -3.21912   CTGTCAATTTAGCAA CTGCCCCGTAAACCCTCGCCC AATC GGGCGGGGATATAAGGGG-AG CTAATCTGGTGTGTT  74 26
        tnpA 5075849 .. 5075868 - -11.4  -3.40141   GAAAACGCCAAGCAA            GCAGCGCG TTTT CGCACTGC             GCTTCAGTGCCATAG  75 220
 JC965_25505 5074052 .. 5074064 -  -9.1  -3.98052   AGAGTAAAAGAAAGA                CGCAG TTC CTGCG                GGTAGAAAAATGGTG  73 78
 JC965_25480 NONE
 JC965_25475 5069662 .. 5069676 -  -9.2  -3.45768   GAGTACAAGGCACAA               GCGGCG GGT CGCCAC               CTAATCAAACTTGAT  65 525
        tnpA 5068619 .. 5068638 - -11.4  -3.40141   GAAAACGCCAAGCAA            GCAGCGCG TTTT CGCACTGC             GCTTCAGTGCCATAG  75 222
        istB 5064807 .. 5064821 -  -4.3  -2.70932   CCCTTGGGTTAATCA               CATAG AACGG CTATG               GCACAAGTTACATGA  43 357
        tnpA 5058096 .. 5058112 -  -2.2  -3.72893   GAGTTTCTTATCAAA             GCAGCGC ATCC ACGC-GC              CATGCAAATCCTTGA  52 420
 JC965_25370 5055785 .. 5055800 -  -5.4  -4.83169   AGTCGCTGACAAAAA              CCGGTA AATT TACCGA               TCCGGTTGAGTTCAG  76 330
 JC965_25355 5054770 .. 5054780 -  -4.6  -3.08344   CTGAAAGGAGATATA                 CCAG TGC CCGG                 CTGCTTGGCTGACGG  47 113
        tnpA 5046692 .. 5046702 -  -2.4  -2.78018   AGCCGGTAGTAACGA                 GTGC TNT GCCC                 NTGCTGACAGGCTTG  39 325
 JC965_25255 5039764 .. 5039792 -  -2.3  -4.58395   GGGACTGTTTAAAAA        CGGCATTCCTGTC CAT GACACCATTGCCA        GGATCATCTCCGGCA  65 369
 JC965_25225 NONE
 JC965_25220 5036427 .. 5036444 -  -6.9  -3.53012   GCCTTGCTGGTCAAA             CGTCGGC TGGC GCTGACG              CTGATTGGCAGCGCG  58 244
 JC965_25210 5033129 .. 5033153 -  -9.9  -4.09685   TTTTAGCGGCTAAAA          CGGGGCGTTCG TGG CGAACGGGCCG          CCTGTATCGCGTTTT  79 244
 JC965_25200 NONE
 JC965_25195 5031687 .. 5031698 -  -5.8  -3.02144   TCAGTCGGTCCAAGA                TCGC CTCG GCGA                 AGGTTGCCTCTCCGA  51 268
        istB 5026159 .. 5026171 -  -9.1  -3.04144   CCGTCATTTGCAACA                GACGG TCA CCGTC                GCCATAGCGCTCAAG  61 356
         rrf 5020545 .. 5020564 -   -15   -5.4833   TCAGGCAATAAAAAA            CCCCGCTC GAGT GAGCGGGG             TTTCTTGTATTGGGT 100 41
 JC965_25110 5019501 .. 5019513 -  -5.5  -3.96216   TGGCCAGGGAAAGAA                CACGC TTG GCATG                CATGTCCTGTCCAAA  62 524
 JC965_25085 5017291 .. 5017318 - -14.4  -4.65747   CAAGGCCGAAGAAAA        CAGAGTTAAGAA TCAG TTCTTAACTCTG         CATTCTTGTTAGCAA 100 50
 JC965_25055 5013147 .. 5013164 -  -3.3  -3.35046   TGACGGGCTCAAACA             CCGTGCC GTCT GACAGGG              TTGCGAGCTTGGCGA  46 50
 JC965_25040 5010976 .. 5010986 -  -4.6  -3.50588   AGGGTAGATTAAAGA                 GCCC CTT GAGC                 ATTAAAGCCGTTTCG  52 135
 JC965_25000 5006768 .. 5006797 - -10.9  -4.16842   GCGAGGCCGAAGAAA       TCAGAGTTAAGAA TCAG TTCTTAACTCTGC        ATTCTTGTTAGCAAG  81 49
        istB 4994480 .. 4994508 -  -4.6  -3.21622   AGATAGAGGTAGTAA       TACTGGCCGCGCA CGAG TG-ACGGCAAGTA        GGTGATATCCCAGGA  49 420
 JC965_24925 4992554 .. 4992564 -  -2.4   -3.6849   AGGGAATGTGAAGAA                 CTCG CTG CGGG                 GCAGTTGTCATAAGC  48 384
 JC965_24910 4989880 .. 4989895 -  -3.2  -5.03747   AAATGGCGGAAAAAA              TAGCCT AAAT AGGCTG               ATTCGATGTGTTTGC  77 108
        istB 4981951 .. 4981979 -  -4.6  -3.21622   AGATAGAGGTAGTAA       TACTGGCCGCGCA CGAG TG-ACGGCAAGTA        GGTGATATCCCAGGA  49 420
 JC965_24845 4978950 .. 4978960 -  -5.4  -4.34557   AACTGAAAAATGAAA                 TGAC TGA GTCA                 GCCGAGAAGAATTTC  67 342
 JC965_24825 4974748 .. 4974758 -  -3.2  -3.43546   GGAGTAAAAGGAAGA                 CGCT ATA AACG                 CGGGCAGAAAAAAAG  48 80
 JC965_24740 4962043 .. 4962071 - -11.9  -4.68384   AGTGACCGAAGAAAA        CAGACATAAACAC TCG ATGCTTATGTCTG        CATTCTTGTTAGCAA 100 50
 JC965_24720 4960168 .. 4960196 - -14.1  -4.65747   CAAGGCCGAAGAAAA        CAGACATAAACAT GTG ATGCTTATGTCTG        CATTCTTTTAGCAAG 100 49
 JC965_24680 NONE
 JC965_24675 NONE
 JC965_24670 NONE
 JC965_24665 NONE
 JC965_24660 4949969 .. 4949981 -  -4.1   -3.3353   CTTTGGATAAAGAGA                CCATA TCT TACGG                CTATTTTTTAATTGC  48 26
 JC965_24655 4948642 .. 4948680 - -12.6  -3.50219   AATACTTTTATATAA   GATAATCTGATATCGGGA TTG TTCCGATGTCAGACTATC   TTTATAAAGAAGATA  79 267
 JC965_24605 4938049 .. 4938074 - -13.4  -3.05816   GCAGCCTTGAGCTAA         TGCCAGTCAG TTAAGC CTGACTGGCA          TTGTTTTTACTAGGT  78 326
 JC965_24590 4936069 .. 4936081 -  -6.2  -3.52877   AGTAATAGATCAGAA                CGGC CGATC GCCG                TCAAGCACTGAAAAT  56 26
 JC965_24585 4933912 .. 4933949 -  -4.8  -4.63218   GTTTGGTCAACAAAA   TACGACTACC-CGACTG TGGGC CAGGCGTGGCAGTCGCC   CCCGAGCTATTCAGC  74 495
        tnpA 4928557 .. 4928570 -  -6.7  -4.78839   AACCGGATAACAAAA               CGGTA CCCC TACCG                TGTTATCCGGAGTCA  79 236
 JC965_24500 4924609 .. 4924627 - -13.2  -5.04601   TCTAGAAATGAAAAA             CCCGTTGA AAT TCAACGGG             TTATATTTGGCGGTG 100 33
 JC965_24455 4913663 .. 4913682 -   -15  -5.90981   TCACATCAAAAAAAA            CGGGAGGC CATG GCCTCCCG             TCTGCATAAGGGGGT 100 55
 JC965_24450 4913164 .. 4913187 -   -11  -5.30155   CGATGAACCAAAAAA          TAGGAGGGGC GATG GCTCCTCCTA           CGGGTTCACTGGCGC 100 45
 JC965_24390 4904387 .. 4904406 - -11.4  -2.56761   GAAAACGCCAAGCGA            GCAGCGCG TTTT CGCACTGC             GCTTCAGTGCCATAG  67 156
 JC965_24320 4890617 .. 4890638 -  -8.8   -5.0916   CCTGTAACACAAAAA           GTGATCAC TTAGGG GTGATCAC            CCGGGATTTTCTCCA  91 12
 JC965_24315 4889610 .. 4889620 -  -5.4   -3.1634   TGGCAAAGGAGCGAA                 CTAC CTT GTAG                 AGCAGGTCGGCATCT  50 15
 JC965_24310 4889044 .. 4889056 -  -2.6  -4.72986   GAGGTGCATCAAAAA                CAGC AAGGA GCCG                TCAGATACACGGGTA  69 6
 JC965_24305 NONE
 JC965_24300 NONE
 JC965_24295 4887472 .. 4887482 -  -8.2  -3.18264   GGGTGGAGCGATGAA                 CGCC AAT GGCG                 CGTGCGGTGGCAAGG  60 180
 JC965_24285 NONE
 JC965_24280 4884257 .. 4884270 -  -3.8  -2.85216   GAGTAGGCATAAGGA               GCCA ATGATA TGGC                ATTTATCAAGATGGC  44 449
 JC965_24215 NONE
 JC965_24210 4873190 .. 4873206 -  -2.1  -4.84761   AGACGGTGAGAAAAA              CCACATC GAA GAAGGGG              TACGCGATTTTGGTT  72 149
 JC965_24190 4870556 .. 4870566 -  -4.6  -4.57569   TGACTGTCCTAAAAA                 GACC CTC GGCC                 TAGAAAGCCTATTCT  71 142
 JC965_24060 4851843 .. 4851866 - -16.8  -5.07941   AAAAGGATACAAAAA          GGGCCACTTC TTGC GAAGTGGCCC           TTTCCAAACGTTTGG 100 101
 JC965_24020 4847257 .. 4847269 -  -9.1  -3.98052   AGAGTAAAAGAAAGA                CGCAG TTC CTGCG                GGTAGAAAAATGGTG  73 53
 JC965_24005 4846474 .. 4846487 -  -3.1  -3.53091   ATCTTTGGGTTTAAA               CTGAA TAAA CTCAG                CCATTGATATCTGTA  48 22
 JC965_23990 4843679 .. 4843691 -  -6.3   -3.8917   GGTTAAGGAGAAGAA                CACTT GAG AAGTG                ACTGCTCCCCGCCGC  64 90
 JC965_23970 4839474 .. 4839490 -  -4.3  -3.19192   CCGCANTTAAGGTAA              GGAGGTG ATC CAACCCC              AGGTTCCCCTAGGGT  47 6
 JC965_23950 4836819 .. 4836837 -  -7.4  -4.42238   GTAGCGTAACCAAAA             CACCGG TTTGAGG CCGGTG             TCAGGTGATAACTAT  77 47
 JC965_23900 4824706 .. 4824716 -  -2.4   -3.6849   AGGGAATGTGAAGAA                 CTCG CTG CGGG                 GCAGTTGTCATAAGC  48 188
 JC965_23880 4821152 .. 4821168 - -13.7  -2.67934   AGATTTACTAAACAT              GAGGGGC TTA GCCCCTC              TATTATTTACAGAAA  75 28
 JC965_23830 4812727 .. 4812742 -  -3.2  -5.03747   AAATGGCGGAAAAAA              TAGCCT AAAT AGGCTG               ATTCGATGTGTTTGC  77 14
 JC965_23730 4800200 .. 4800225 -  -9.8  -5.65177   ATACGCATAAAAAAA         TCCGAAACCC AACAAG GAGTTTCGGA          TTCTTACACAGCCTG 100 137
 JC965_23660 4787854 .. 4787869 -  -7.6  -4.21194   TTTCAGGAGGCAAAA              CTGCAT TTAA ATGCAG               TATTTTTTGAGGCTG  72 522
 JC965_23625 4782317 .. 4782327 -  -4.6   -5.8187   TATTCAAGAAAAAAA                 GCGA CAA CCGC                 GACGCTATCCGGTTC 100 271
        tnpA 4781487 .. 4781497 -  -2.4  -3.71917   ATCTTAAATGCGAAA                 GGGG ACT CCCT                 CCGACGTAGGTGGGA  51 59
 JC965_23600 4779713 .. 4779727 -  -5.7  -3.05384   GGCCTGGGGATTGAA               GACGA ACTGA TCGTC               ATAATTGCTCAGGTT  52 85
 JC965_23595 NONE
 JC965_23590 4778818 .. 4778840 -  -4.2  -3.50853   CTCCTTGAAGGACAA          TG-CCACCA AGTAGA TGGTGGACA           TCGAGCTGCCATCAG  52 45
 JC965_23585 4778026 .. 4778046 -  -6.1  -4.14392   AGAGGTAGAGAGAAA            GCCCCGTTA TGT TAACCGGAC            GGTTCGGGGCTTTGA  66 43
 JC965_23580 4775937 .. 4775968 -  -9.5  -3.31144   TCCTTAGGCGGACAA     GGAGGCTTGCGCGAC TTGG GTCGCAC--GCCTCC      GAGGAGCTGGCCACA  68 293
 JC965_23570 4774020 .. 4774034 -  -8.5  -4.16943   CTCCACAGGCTAAAA               CGGCG TGTCC CGCCG               CTAAAATATTGCGAG  73 473
 JC965_23510 4765038 .. 4765058 -  -9.7  -2.79557   AAGCACGGCAACAAG            GAGGAGGTG ATC CACTTCCTC            ATCTCCCACCCGACC  63 433
 JC965_23400 4743803 .. 4743830 -   -20  -3.28447   CCACCCATCACAACA        GAGAAAGGGGCC CCAG GGCCCCTTTCTC         GTCACTGCCTCAACC 100 68
 JC965_23355 4739921 .. 4739944 -  -9.6  -4.55128   ACGCCCAAATGAAAA          CCGCACCA GGGTGATG TGGTGCGG           TCTCAATGTCCTTGC  87 50
 JC965_23330 4736065 .. 4736081 -  -8.7  -3.74361   CAGATCTATGAACAA              TCCTCGC TAC GCGAGAA              TGATAGCCATAGCTA  71 130
        istA NONE
        istB NONE
        istA NONE
        istB NONE
 JC965_23305 4729477 .. 4729498 -  -6.5  -3.83026   CCGCCGGACATGAAA           CCGTCCAGGT GAT ACCAGG-CGG           GATCCAGGGTCTGGG  63 501
 JC965_23295 4727419 .. 4727429 -  -8.2  -2.62184   CTTCGCGTCACAGGA                 GGGG GAT CCCC                 ATTACTGGGTGATAG  56 27
 JC965_23250 4720850 .. 4720880 -  -6.2  -3.47078   GAGCCGATAGGACAA       TATCATTGGCTCAC AGA ATGAGTCGATGATA       GGAAATAGTTCTCTC  56 71
 JC965_23245 4720144 .. 4720168 -  -9.2  -4.06964   ACAGATAGAATTAAA          GGCCCACGCC GAGCA GGCATGGGCT          CTCAGCATTAGATCA  75 33
 JC965_23215 4716469 .. 4716523 -  -6.5  -3.95153   GGAATGACGGATAAA CAGTCAGGTGC-TCGTAGTGGC GTCGTGAGCTGG GCCACTACAAAGCACCAGCCCG CTATGAAATTTGCAA  66 26
 JC965_23205 NONE
 JC965_23200 4713184 .. 4713197 -  -6.7  -3.17714   GGAAAGTGGGATCAA               GAGAC GATC GTCTC                ATTTTTCCTGTGTCA  54 60
 JC965_23185 4711148 .. 4711179 - -24.6  -3.25823   GTGGGCGGACAGCAA      TGACAACGGGGGGC CTGG GCCCCCCGTTGTCA       TTGGCAGCTGTCGCT 100 40
 JC965_23165 4708947 .. 4708957 -  -4.6  -3.08344   CTGAAAGGAGATATA                 CCAG TGC CCGG                 CTGCTTGGCTGACGG  47 127
 JC965_23150 4706665 .. 4706675 -  -4.6  -3.50588   AGGGTAGATTAAAGA                 GCCC CTT GAGC                 ATTAAAGCCGTTTCG  52 135
 JC965_23140 4705271 .. 4705286 -  -3.2   -2.7782   GAAGGTGCGAATAAG              CGGGAA ATTC TTCTCG               GCTGACTCAGTCATT  41 138
 JC965_23135 NONE
 JC965_23130 NONE
 JC965_23125 4701634 .. 4701652 -  -3.8  -3.38178   CAAGTAAGTCGATAA             GGTCTTAC TAC GTAAAGCC             AACTGACTGATCACC  50 245
        rfbB NONE
        rfbD 4697738 .. 4697751 -  -3.8  -4.33417   TTCACCCAGAATAAA               GGCT TGCGCC AGCC                CATCCGGGCTCGGCT  63 410
 JC965_23070 4692711 .. 4692725 - -12.8  -3.61715   TACCGGCTTGAACAA               GGGCGC CAA GCGCCC               TCTGGCCTTCAGCTT  81 34
 JC965_23040 4689285 .. 4689304 - -13.6  -4.72272   TTGCTGCATGAAAAA            GGAGGGAG CAGG CTCCCTCC             GACTGTTACCCATCA 100 38
 JC965_23000 4684694 .. 4684718 - -11.6  -3.34013   TATTCTGGTAATTAA          GTATGAGCAA TTCAC TTGCTCATAC          TCTTAGTACATAATG  74 45
 JC965_22950 4678975 .. 4678994 - -16.4  -3.06696   GGCGGCGCGAAGACA            CGCCCCGG CTGC CCGGGGCG             GGACGGGTCACATGT  88 33
        rsmS NONE
 JC965_22940 4677846 .. 4677895 -   -12  -3.14132   TCTGGCCCTCATCAA GCAGGGGCGCG-GCCAAGGGGAG CCCAT CGCCCGCTGGCGCGAGCCCCTGG CCTGGGTTGACAGCC  70 404
 JC965_22930 4676763 .. 4676789 -  -9.2  -2.53894   ACCAGCACCAGCAAG         GCGCCGCTGCCC GGG GGGAGGAGGCGC         TTATGCATGGGGCAG  58 26
 JC965_22835 NONE
 JC965_22830 4660803 .. 4660841 - -12.6  -4.52857   ACTTTTTATATAAAA   GATAATCTGATATCGGGA TTG TTCCGATGTCAGACTATC   TTTTATAAAGAAGAT  95 66
 JC965_22815 4659866 .. 4659881 - -11.8  -3.34715   GATGCGGGTGAAATA              GGGGCG AAGC CGCCCC               CGGATGGCCTGCGCG  77 122
 JC965_22790 NONE
 JC965_22785 4652950 .. 4652964 -  -7.2  -3.44229   ATTTTAGCATCATAA               TGCATT TTA AATGCA               ATGTCTAAAATTAGC  61 156
 JC965_22765 4649256 .. 4649270 -  -5.6  -2.64616   TCGCCACCCACAGGA               TGACCG GCT CGGGCA               GCTCGCTGTCGGTTC  46 240
 JC965_22725 NONE
 JC965_22720 4637132 .. 4637148 -  -2.3  -3.98009   ATAAAACTGGATAAA              GCCTATT GGT AATAAAC              TAGTGAATAGCATTA  54 309
 JC965_22670 4629612 .. 4629642 - -16.2  -4.40692   TCTAAAAAATAACAA       GGGACTGCAAACGC GCT GCGCTTTCAGTCCC       GCTTGTTTTAAGATT 100 197
 JC965_22655 4626209 .. 4626221 -  -6.9  -3.14132   GTCGGCGCGTATGAA                CGGGC ATG ACCCG                TATGCGTACCTGAGG  53 139
        istB 4608859 .. 4608887 -  -4.6  -3.21622   AGATAGAGGTAGTAA       TACTGGCCGCGCA CGAG TG-ACGGCAAGTA        GGTGATATCCCAGGA  49 420
 JC965_22520 4602368 .. 4602397 - -22.9  -4.17762   TAGCCTGCAAAACAA       GGCGGGGTGCCCC CAAA GGAGCACCCCGCC        TGCCATCAACCCGCT 100 47
        arsC NONE
 JC965_22505 4600992 .. 4601017 - -18.3  -3.05022   GGTTTCAGACACATA         CCCTGCCCGCC AGCA GGCGGACAGGG          AGGGGCTCAGCCTTC  90 32
        gdhA 4591336 .. 4591364 - -23.3  -3.33525   GCTATGCAGATAACA        CAACAGGGCAGCC ATG GGCTGCCCTGTTG        ATTTGGGGGATGTCA 100 56
 JC965_22460 4590872 .. 4590882 -  -8.2  -2.51464   CTATCACCCAGTAAT                 GGGG ATC CCCC                 TCCTGTGACGCGAAG  55 150
 JC965_22445 NONE
 JC965_22440 4588510 .. 4588524 -  -2.7  -2.80016   ACAAAAAACATTAAC               GGGCC GCCTT GTCCC               ACAACAGGCGGGTAT  41 6
 JC965_22435 4585863 .. 4585877 -  -8.5  -5.57054   AAGAACCTAAAAAAA               CCGGC ACAAG GCCGG               TTTTTGACGAACAGG  95 49
 JC965_22395 NONE
 JC965_22390 4576753 .. 4576763 -  -2.4   -3.6849   AGGGAATGTGAAGAA                 CTCG CTG CGGG                 GCAGTTGTCATAAGC  48 189
        istB 4569950 .. 4569965 -  -3.2  -4.84527   TTGACACAGGAAAAA              TGAGAC GATC GTCTCT               TGATCCCACTTTCCT  70 329
 JC965_22340 4567421 .. 4567452 - -23.2  -3.86346   CCAGCCCTTGATAAA      CAAAAGGCCCCGTC TTTC GACGGGGCCTTTTG       TTTTATTTGGCGGTG 100 33
 JC965_22315 4562669 .. 4562697 - -16.8  -3.82202   CACCGCCAAAGAGAA       GGGGCGGT-GGAC AGGA GTCCCACCGCCCC        GAAAGACATGTCGCC 100 125
 JC965_22310 4560584 .. 4560599 - -11.8  -5.65177   ACACCCACAAAAAAA              GCCGCC CGAA GGCGGC               TTTTGTCATCACGGG 100 62
 JC965_22255 NONE
 JC965_22250 4549346 .. 4549357 -  -4.4  -2.58758   AGAAGGGGCGACAAG                GTTG GAGA CAAC                 ACAACACCAACAAAT  43 47
 JC965_22245 4548587 .. 4548606 - -11.4  -3.40141   GAAAACGCCAAGCAA            GCAGCGCG TTTT CGCACTGC             GCTTCAGTGCCATAG  75 156
 JC965_22215 NONE
 JC965_22210 4544937 .. 4544956 - -13.6  -4.86133   GACAGATACGAAAAA            GCCCAGTC CTGA GACTGGGC             TTTAGAAGATGGCTC 100 35
 JC965_22200 4542976 .. 4542986 -  -2.4  -4.71482   AGGAAATGTGAAAAA                 CTCG CTG CGGG                 GCAGTTGCCATACGC  69 207
 JC965_22180 4539428 .. 4539444 -  -5.7  -3.58854   CAACGAGAACGACAA              GACCCGC CCT GCGGAGC              TGGAAATCCTGGACG  57 324
 JC965_22170 4537436 .. 4537462 -  -5.1  -3.09671   ATGTCAAGGTGAAGA        CTTGCGCC-GCGC GGT GCGCTGGCTC-AG        CGAACACCATCAACA  47 149
 JC965_22150 4535061 .. 4535080 - -12.2  -5.10665   AGGGAACAAATAAAA            GTGACCCA CGAA TGGGTCAC             TCAGATGGCCAGCAG 100 43
 JC965_22145 4534461 .. 4534490 -   -10  -5.81032   GAAGGCCAAAAAAAA       GGCCACGCATCCC GATGT GGG-TGAGTGGCC       TTGTAAGTTAGAAAA 100 33
 JC965_22140 4532681 .. 4532694 -  -3.1  -2.78384   CGTCCTCGGAGGAGA               TCGAC CGCG GTCAA                AGCCCCTCTTTACGC  41 35
        umuD NONE
 JC965_22130 4531478 .. 4531524 -  -2.9  -2.66517   AGTCATCAATAACAT TCATGCCGATCATGGTTTCCC ATAGA GGAAAAAAGTGATCGGCCTGG GATGTTATTGGGCGA  40 30
        istB 4528711 .. 4528729 -  -2.4  -3.07113   GACTATGGCACTGAA            GCGCAGT GCGAAA AC-GCGC             TGCTTGCTTGGCGTT  42 361
        tolC 4522217 .. 4522239 - -12.1  -4.88918   CCAGGTTAAATAAAA           GGCATCAGT GCAAA ACTGATGCC           TATTGAAAAATAGAT 100 50
 JC965_22065 4518487 .. 4518497 -  -4.6  -3.33261   GCTCAATGTTGATAA                 CCGC ACT GCAG                 CAGCAAGTATTTCAC  50 472
 JC965_22030 4511272 .. 4511305 -  -4.5  -4.10925   ACAGATTGTTGAAAA     TACAGCCCGTCCATC AATA GATGGAAGAGATGAA      TTGCTTGAATCGCTC  61 5
 JC965_22025 4510328 .. 4510364 - -15.2  -2.61274   TCCATTGCAACTAAG   CGGGCCCATCG-CTCCC TTGC GAGAGACAACGGGCCCG    GTGACTACAGACGAG  80 107
 JC965_22020 4509439 .. 4509478 -    -5  -2.91383   ATCGTGATGTAGATA  CGCTCGT-CACTGACACCG CGA CGATCACAGTAAACGAACG  ACTGCATTGAATACG  48 48
 JC965_22015 4508581 .. 4508607 - -11.5   -4.9725   ATGTTCATAGAAAAA         CGCCCCAGGCC ATCGA GACCCAGGGCG         GTGAAGATATCAAAG 100 133
 JC965_21995 4506470 .. 4506501 - -18.8  -3.17075   CTCCCTCTAATGGAA      CAAGCCCGAACAGG TGCA CCTGATCGGGCTTG       TTGTTGTGCCTGACG  95 73
 JC965_21980 4502321 .. 4502345 - -14.4  -5.46276   AATAGACATAAAAAA          TCCGGAACCA GTGAT TGGTTCCGGA          TTGTCCTACAGCAGA 100 120
 JC965_21965 4498803 .. 4498813 -  -2.4  -2.88861   GAGGATGGGCATAGA                 TGCC AGA GGCG                 ACTAGGCTGTGTTCT  39 40
 JC965_21960 4498142 .. 4498152 -  -3.2  -3.67877   ACTGTGCAACAAACA                 CCCA AAA TGAG                 CAAAAAAAAACCAAG  50 406
 JC965_21955 4495845 .. 4495862 -  -9.9  -2.71144   GAGTGTTTGCAACTA             TCCGATC TTTG GATCGGA              GAACGGTCTCTATTT  62 407
 JC965_21950 4495291 .. 4495306 -  -5.4  -4.83169   AGTCGCTGACAAAAA              CCGGTA AATT TACCGA               TCCGGTTGAGTTCAG  76 336
 JC965_21935 NONE
 JC965_21930 4492158 .. 4492180 -  -7.8   -5.0916   CCTGTAACACAAAAA           GTGATCAC TTAGGGG GTGATCAC           CCCGGGATTTTCTCC  88 22
 JC965_21925 NONE
 JC965_21920 4488652 .. 4488676 - -15.1  -3.40403   TCTGCTGTAGGACAA          TCCGGAACCAA TCA CTGGTTCCGGA          TTTTTTATGTCTATT  88 487
 JC965_21895 NONE
 JC965_21890 4485158 .. 4485176 - -11.7  -2.75844   TTTGTTATTTCAAAG             CACCGGC CAAGC GCCGGTG             TTCTGCGTTTTGGGC  69 234
 JC965_21840 4476435 .. 4476457 - -19.2  -2.71364   GCATCGGCTGAACGA           CAAGGGCGCC AAT GGCGCCCTTG           TCGTATCCGAAGGGG  91 44
         syd 4470289 .. 4470320 - -24.6   -4.7254   ATGGCGCATTAAAAA      GAGAGGGCCTTGCC AGGT GGCAAGGCCCTCTC       TTTTGGGGCATCACT 100 36
 JC965_21715 4453975 .. 4453997 -  -8.4  -4.59773   TTCTAGCCTGAAAAA           CCGCCAAC GGGGAAG GTCGGCGG           CAGATTTGTAGCCGG  82 43
 JC965_21710 4452276 .. 4452290 -  -2.8  -2.60194   AGTGCTCTAACCAAC               TGAGCT ATA AACCCA               CTTCATAAACCGGAC  40 219
 JC965_21705 NONE
 JC965_21700 NONE
 JC965_21695 4451980 .. 4451994 -  -2.8  -2.60194   AGTGCTCTAACCAAC               TGAGCT ATA AACCCA               CATCAAATTCATATC  40 62
 JC965_21690 4451875 .. 4451885 -  -6.8  -2.75382   CAGCTGAGCTAAGGA                 CGCA GGG TGCG                 CAAAGCGACTTTGTG  51 57
 JC965_21685 4451773 .. 4451790 - -12.7   -4.7629   CGACCAATGCAAAAA             GCCCGCT ATCA AGCGGGC              TTTTCAAATCTGGTG 100 36
 JC965_21660 NONE
 JC965_21655 NONE
        lpxH 4444977 .. 4444993 -    -3  -3.91897   GGCGTGAGTCAGAAA             CG-GTCT TATG AGACTCG              CTCATGACCATGGCA  56 52
 JC965_21645 4444599 .. 4444623 - -17.1  -3.79419   GCGGGGCAGAAAACA          GCGAGGGCGCC ACT GGCGCCCTCTC          ATCGATGGGTGGCTG 100 45
 JC965_21640 NONE
 JC965_21635 4442759 .. 4442805 -  -7.8  -2.71712   GTGTGGCTGCGAAAT GCCCTGGAGAGGCTCGCCTGAC GTG GTCAGGCGAGCCGGCTCATATC GCGTCAGTCATCACC  53 36
 JC965_21615 4440345 .. 4440373 - -16.1  -3.85698   TGTCGTGGGCACAAA        GAAAAGGGGAGCC AGT GGCTCCCCTTTTT        GCATGGTATGGATGC 100 45
 JC965_21605 NONE
 JC965_21600 4436570 .. 4436595 - -13.3   -4.7254   ATGGCGGAGCAAAAA         GAGAGGGAGGC TCAT GCCTCCCTCTT          TATGCCGATGACCGT 100 45
        pdxH 4435479 .. 4435492 -  -2.3  -2.57344   TAGCGGCGGGAGAAT               TCGGT AATG ACCGC                CGGCAGCTTGTAGCG  38 352
        tnpA 4430103 .. 4430113 -  -2.4  -3.71917   ATCTTAAATGCGAAA                 GGGG ACT CCCT                 CCGACGTAGGTGGGA  51 60
 JC965_21540 NONE
 JC965_21535 NONE
 JC965_21530 4427431 .. 4427453 -  -4.2  -3.50853   CTCCTTGAAGGACAA          TG-CCACCA AGTAGA TGGTGGACA           TCGAGCTGCCATCAG  52 45
 JC965_21525 4426639 .. 4426659 -  -6.1  -4.14392   AGAGGTAGAGAGAAA            GCCCCGTTA TGT TAACCGGAC            GGTTCGGGGCTTTGA  66 43
 JC965_21520 4424544 .. 4424575 -  -9.5  -3.31144   TCCTTAGGCGGACAA     GGAGGCTTGCGCGAC TTGG GTCGCAC--GCCTCC      GAGGAGCTGGCCACA  68 228
 JC965_21510 4423163 .. 4423173 -  -2.4  -3.71917   ATCTTAAATGCGAAA                 GGGG ACT CCCT                 CCGACGTAGGTGGGA  51 187
 JC965_21500 4421906 .. 4421921 -  -4.6   -4.9218   CAGTCACCAGAAAAA              TGTGCG TTTG CGCACG               TGTTCTGTCATCGAA  78 56
 JC965_21495 NONE
 JC965_21490 4421039 .. 4421060 -  -5.9  -3.28712   CGCGGTCTGTGACAA           CAAGATGTA TCCA TACCTCTTG            CGAACATCAACTGAC  54 111
 JC965_21485 4420745 .. 4420774 - -20.9  -3.58343   CCCAGTATCCTGAAA       CAACAACGCAGCC CTCG GGCTGCGTTGTTG        TTTTTGGGCAGTCAT 100 56
 JC965_21475 4418990 .. 4419010 - -13.3  -5.52384   GGGTGAGCAAAAAAA            GAGGCACGC ATG GCGTACCTC            AGGAAGTGGGTGGGT 100 24
        purT 4417686 .. 4417703 - -12.7  -3.66178   TGCTTCAATGGGAAA             GGGGCAG TCAC CTGCCCC              TTGCGCCGGATCACG  81 79
        hxpB 4416899 .. 4416911 -  -6.9  -2.57931   TCTAGTCGCCACAAG                GCGGC GCA ACCGC                GAGCAAGCGCACGTT  50 83
 JC965_21460 NONE
 JC965_21440 4413199 .. 4413228 - -12.9  -4.10161   CAGCAGGGCGGAAAA       CAGAGAAGGTGGC CTGG GCCACCCTCTCTT        TTTCTATGGCATTGT  91 73
 JC965_21430 4410374 .. 4410399 - -13.3  -5.47821   ACGCAGGCAAAAAAA         GAGAGGCCACC CGAA GGTGGCCTCTT          TTTCATCATCTCAAC 100 59
 JC965_21425 4409511 .. 4409529 - -14.6  -5.73339   AGAACCATAAAAAAA             GCCATGGC ACT GCCATGGC             CTGCGTGAGCCGGCC 100 44
 JC965_21410 NONE
 JC965_21405 4408224 .. 4408247 -  -3.8  -3.20403   TTAATCGATAACATA          CCCTATTTAG TCCA CTTAATTGGG           GTGAGGGTACTCTTG  46 4
 JC965_21400 NONE
 JC965_21395 4404492 .. 4404505 -  -3.8  -4.19817   TGTAGCCACCCAAAA               GACC TCAAAC GGTC                CCTTCTCTTACAAGC  63 257
 JC965_21390 NONE
 JC965_21385 4402096 .. 4402108 -  -6.2  -4.58466   CGGAGAAGGATAAAA                GCGG TCATT CCGC                AACGCAGCGACCAGC  75 511
 JC965_21370 4399088 .. 4399110 -  -9.8  -2.87132   CGCCTTCTTTAGATA           GTGGGCAGGA TTT CCCCACCCAC           GACGTGGATCCCTTT  63 97
 JC965_21365 4397856 .. 4397871 -  -3.2  -4.83615   TACCCTCCATAAAAA              TGGGTT CTCC ACCCCA               CTCCGGTCGCTGCGC  70 236
 JC965_21360 4397252 .. 4397271 -  -6.4  -4.88736   CATGAGCTATAAAAA            TGCCACTA ACAA TGGTGGCA             TTGGCCGTCTGTCCT  82 47
 JC965_21355 4395695 .. 4395715 - -11.8  -4.84761   AGACGGGCAGAAAAA            GCCCCGCC TTATC GGCAGGGC            TTAAGAGTCACTTGT 100 33
 JC965_21345 4393709 .. 4393724 -  -3.2   -2.7782   GAAGGTGCGAATAAG              CGGGAA ATTC TTCTCG               GCTGACTCAGTCATT  41 138
 JC965_21340 NONE
 JC965_21335 NONE
 JC965_21330 4390072 .. 4390090 -  -3.8  -3.38178   CAAGTAAGTCGATAA             GGTCTTAC TAC GTAAAGCC             AACTGACTGATCACC  50 245
 JC965_21320 4388571 .. 4388581 -  -2.4  -2.76686   AGGGGATACAAAGAT                 GGCC TGA GTCC                 CTACCAACGGTTGGC  39 44
 JC965_21315 4387970 .. 4388022 -  -7.8  -3.80733   GTCAGCCGAGAAGAA TTTCCCCG-CTTATTCGCACCTTCC CTAG GGAAGGTGCGAACAAGTCCCTGATA TGAGATCATGTTTGT  67 237
 JC965_21305 NONE
 JC965_21300 NONE
 JC965_21295 NONE
 JC965_21290 4384846 .. 4384856 -  -2.4  -3.48276   TTCTTTCGGACATAA                 GAGG TTT CCAC                 AAAACAATTGATAGA  46 60
 JC965_21285 NONE
        msrP NONE
 JC965_21275 4382479 .. 4382497 -  -5.9  -4.61873   GTTCATAAACCAAAA             TGGCCGG CAATT CCGGCTA             TTTTTATTTCGTGAT  75 196
 JC965_21260 4380774 .. 4380786 -  -3.3  -3.38046   TCGGTACGGGAAATA                CTCGA CGG TCGTG                GTCAGTCAGCTGCCA  48 212
        minC NONE
        minD NONE
        minE 4376633 .. 4376655 - -13.5   -5.1675   CCAGGCATTAAAAAA           CCGGATCCT GGGAA AGGATCCGG           TCTTCATTGGGGGAA 100 64
 JC965_21220 NONE
        mtgA 4375260 .. 4375277 -  -9.8  -3.11326   GATAAGGTTAACAGA             GCCGCC AGCAGG GGCGGC              GTGACGGGGCGGCCT  66 174
 JC965_21210 4374798 .. 4374812 - -12.8  -5.25735   GCAAAAAACGAAAAA               GGCGCC TGG GGCGCC               TTTTCTTATGCCTGT 100 31
 JC965_21160 4367505 .. 4367521 -  -9.4   -4.7373   GCATGGCATGAAAAA              GGACCC GCTCA GGGTCC              TTTTTCATGGATGGG  86 48
 JC965_21150 4366264 .. 4366283 - -12.2  -3.02511   CGGATGTGTTGAAGA            GCCACTTC CCGC GAAGTGGC             TTTTTTATGCCCTGC  73 90
 JC965_21120 4363711 .. 4363731 -  -4.6  -4.33248   CAATTTCAGAAGAAA            CGGGTGCC ATAAG AGCACCCC            GTCTGAGAGGCGTCG  65 84
        rbsD 4363130 .. 4363142 -  -6.9  -3.47751   TTGAAGAATTCAGAA                CGCCA CAC CGGCG                CAGAGGATCAGGTTG  58 7
        rbsA NONE
        rbsC NONE
        rbsB 4359660 .. 4359681 - -13.7  -3.90316   ACTGGCGGAAAAAGA           GAGGGGAGG CGAA CCTCCCCCC            AACAACTTACTTGTT  93 32
        rbsK NONE
 JC965_21090 4357589 .. 4357617 - -16.8  -3.25147   CAAGGAGACAATACA        CAGAAGAGCGGC TCATG GCCGCCCTTCTG        CTGCTTGCTGGCACT  90 40
 JC965_21030 4348316 .. 4348327 -  -2.2  -3.78902   CAATGAATATGGAAA                GAGT TTTT ACCC                 AGATCGATACCAATG  51 136
        argA 4346364 .. 4346376 -  -3.3  -4.30034   AAAATGGCAGGAAAA                CGCGA GGA TCCCG                GCCAGAAGCACTCCA  61 357
        lysC 4344838 .. 4344859 - -17.3  -3.45032   GAAGAAGAGTGACAA           GAGGGGCGC CGCG GCGCCCCTC            TTTGCTGAGTGGGGA  95 100
 JC965_21005 4341093 .. 4341112 - -11.4  -4.82901   TCCCGCCCATAAAAA            GAGGCCGC CCGG GCGACCTC             TTTGTCTTCTGCTAT 100 114
 JC965_20975 4337316 .. 4337331 - -10.4  -4.72272   TGCGTCCATGAAAAA              GGCAGC CTCG GCTGCC               TTTTTCATTCCCTGC  95 64
        mscM NONE
 JC965_20960 4331478 .. 4331488 -  -2.4  -4.71482   AGGAAATGTGAAAAA                 CTCG CTG CGGG                 GCAGTTGCCATACGC  69 357
 JC965_20940 NONE
 JC965_20935 4325766 .. 4325778 -  -6.9  -3.63744   TCCCCCCTCAAAACA                GACGG CAT CCGCC                CTCCTGCCACTGGCG  60 5
 JC965_20930 NONE
 JC965_20925 4324149 .. 4324179 -  -8.8  -3.25823   GGCCGGGGAGAGCAA       GCCGGGATCGCGGC GGC GGCGCCACCCCTGC       CACAGCCAGGGGATC  65 103
        speA 4319969 .. 4319986 - -14.1  -5.09204   ACAGCGCAACAAAAA             CGGCGCC CGAA GGCGCCG              TTTTTCATGTCCGTC 100 70
 JC965_20910 4319545 .. 4319580 - -11.7  -3.14211   AGGCGGGCTGAGCAA    GGCGGGCCGCCGGGA CGATAC CCCCGATGGCCCGCA     GGCAGTCAGCGTTGA  71 31
 JC965_20895 4315913 .. 4315933 - -13.9  -3.68351   TCCCCAGCACTCAAA            GCGGCCCCC ACG GCGGGCCGC            CTTCGTGTGGTCAGC  84 36
 JC965_20870 NONE
 JC965_20865 4311838 .. 4311858 - -12.6  -3.30741   ATGCATAATCATTAA            TGGGGGAG TCTCT CTCCCCCA            TCTCCTAAAGTTGGT  78 40
 JC965_20860 4309492 .. 4309513 - -15.9  -4.26881   TCCCATAAAAGCAAA           GGGGCCAGT TCGC ACTGGCCCC            TCTTACTCTTAAAAC 100 34
 JC965_20825 NONE
 JC965_20820 4302057 .. 4302073 -  -3.7  -3.99236   GCGATAAAAAAGTAA              CGATATG AAT CATACCA              TCATCTTTTTAAATT  58 34
 JC965_20815 NONE
 JC965_20810 NONE
 JC965_20805 NONE
 JC965_20800 4297714 .. 4297728 -  -4.2  -3.54029   CGCCATCAATCAGAA               CCGAAA AGA TCCCGG               GTATAGACCTTGTCG  52 1
 JC965_20795 4295910 .. 4295956 -  -6.4  -2.53263   GTGAGGGTGAATCGA TATGCCAGCGCAGCTGGCCACC CGA GGTAGCCAGTGACGATGTCATC AGGGTGTAAGTGGTT  48 369
 JC965_20775 4292641 .. 4292658 -  -3.4  -2.89094   AACAAATATCAACCA             GACCCT TTGTGC AGGATC              CCTCAACCCGCCGTT  42 28
 JC965_20770 4291974 .. 4291991 -  -9.1  -3.67296   GAGCAGGGACTGAAA             CTGGCGGC CAA GCCGCC-G             ATGGCGCTCCAGAAG  68 181
 JC965_20760 4290845 .. 4290858 -  -3.1  -2.68202   CCTAGAGTAAAAAGC               TGAAC AAGC GTCCA                TAAATGTCAGTGCTT  40 32
 JC965_20755 4290149 .. 4290160 -  -5.8  -3.47573   TCAGGGAGATCAGAA                GGTG AATT CACC                 ACCGATGAACCAGCC  56 8
 JC965_20750 4289380 .. 4289397 - -14.1  -4.91873   CACATCAATGAAAAA             GCGCGCC AAAT GGCGCGC              CTTTTGTTTCTGCTC 100 72
 JC965_20715 NONE
 JC965_20710 4281211 .. 4281231 -    -9  -2.75975   GTGGAACAGATACGA           GCAGGGGGC CTTG GCCCCCT-C            TTTCATTACCGGGGT  60 71
 JC965_20690 4278920 .. 4278933 -  -3.1  -2.53911   TGAAGTGTCAACGCA               CGCTGC GCA GCAG-G               AAGTCCGGCTGGCCA  39 4
 JC965_20685 4277525 .. 4277545 - -11.9  -2.88249   CACAGTTTTTATACA            GACTTACCC ACA GGGTAAGCC            CAGAAAGGGCTCATT  71 142
 JC965_20660 4271647 .. 4271671 - -22.9   -2.7185   AGCAGCCCTGAATGA          CGAGGCCCCGC AGT GCGGGGCCTCG          TTCACTGACCGCCTA 100 38
         azu 4269807 .. 4269823 - -13.7  -5.48063   AGCGAAGACAAAAAA              GCCGGGA CCT TCCCGGC              TTTTGCTTGTACTGG 100 61
 JC965_20645 4269058 .. 4269075 -  -7.7  -3.39895   GCCCCCATCAAGGAA             GCGGGGAG TTT CTCCC-GC             TTTCCCGGCTACCAG  60 424
 JC965_20630 4267771 .. 4267794 -    -8  -4.28375   GCAATACATTCAAAA          CCAGCGGGGC TGAC GCCCCGGCGA           AATTCCCCTCCCACC  77 206
 JC965_20555 4254866 .. 4254878 -  -4.7  -3.61398   CCTTCGCGCCAACAA                CGGGG TGG CCCTG                ACCCGGGCCGCCTGC  55 265
 JC965_20545 NONE
 JC965_20540 4252656 .. 4252680 - -20.1  -3.74224   GGGAAAGCAGGCAAA          CAGAACCCGGC ATA GCCGGGTTCTG          TGTGTATCCAGATAA 100 148
 JC965_20535 NONE
 JC965_20530 4251143 .. 4251164 - -15.9  -3.90112   GGGGCTGCAACGAAA           GAGGGAGGC CTGC GCCTCCCTC            TTTCACATCATGGGT 100 49
 JC965_20495 4242322 .. 4242339 - -11.3   -4.3208   CGGCACAATGCAAAA             TGGCAGC TTCG GCTGCCA              TTTTCATTTGTGTTG  89 55
 JC965_20485 4240067 .. 4240079 -  -2.7  -3.00298   CTTGCCAATCAGACA                GCTTT CAC AAAAC                GTTTCGGACGCTCGC  42 6
 JC965_20480 4239183 .. 4239198 - -10.4  -4.72272   CGCTGTCACGAAAAA              GGCACC CTCG GGTGCC               TTTTGTGTTTCTACC  95 59
 JC965_20460 4236442 .. 4236459 -  -9.8  -3.49618   GCCCGAGACAAGCAA             GCCCCG AATCGG CGGGGC              TTTTTTGTGGGCGGT  70 55
        msrA 4226944 .. 4226967 - -19.6  -2.86271   TTTTCATCACAATGA          CACGGGGGCC TGAT GGCCCCCGTG           GTATGCAATGACGCC  95 41
 JC965_20390 4224275 .. 4224289 -    -7  -3.41878   CTTTTCAACCGACAA               CGCCGG TGC CCTGCG               CAAGGCGGCGCTGGG  57 264
 JC965_20380 NONE
 JC965_20375 NONE
 JC965_20370 NONE
 JC965_20365 4218624 .. 4218647 -  -7.4  -3.10715   GTGATGAGCACCGAA          TCGCTCAGGGC CTG GCCC-GAGAGA          CTGGTGCCGGCGGCG  57 245
        sugE 4214833 .. 4214845 -  -5.5  -3.93256   GACACCCTCAAAGAA                GGGCT GCC AACCC                AGGAGGCACCGGCTC  62 484
 JC965_20335 4212272 .. 4212293 - -15.9   -3.8637   GTAGACCATAAAACA           GAAGGGGCC ATAA GGCCCCTTC            GTCACGCTAGCATAT 100 46
        focA 4211057 .. 4211101 -  -5.9  -2.52896   TTACCTCTCAAGGTA TTTATGTGTCTGCCGCCATC CTTAAT GATGGCGACGGA-AGATAAA CCAGTAAGTCAGCCC  48 2
        pflB 4208715 .. 4208732 - -14.1  -5.65177   ACAGCCATAAAAAAA             CCGGCGC CTTG GCGCCGG              TTTTTGTTCTCCGAG 100 47
        tnpA 4206935 .. 4206945 -  -2.4  -3.71917   ATCTTAAATGCGAAA                 GGGG ACT CCCT                 CCGACGTAGGTGGGA  51 60
 JC965_20295 NONE
 JC965_20290 4203068 .. 4203081 -  -3.8  -4.69027   AAACGGAGTGAAAAA               TCCC CATGGC GGGA                GGTCATCTCACGCTA  75 287
 JC965_20260 NONE
 JC965_20255 4194308 .. 4194328 -    -4  -4.15044   TCGGGCTGGAACAAA            CGACACAT CAGAC ACATGTCG            CCGAAAAGCCCATGA  60 86
 JC965_20250 4193798 .. 4193811 -  -2.3  -5.06816   ACCCTGCAAGAAAAA               CGTGT CAAA ACTCG                AAAACCAACCCGTGT  75 86
 JC965_20245 4193143 .. 4193157 -  -2.8  -3.08046   TCTTCATTTCAAAAT               CCATTC TCT GAATCG               TGGTTGATATACACC  43 85
 JC965_20240 4192773 .. 4192796 -  -7.5  -4.42639   AGATGGCAATGAAAA          GATGCGATC AATCAA GATCACATC           TCCTCATATCCGAGG  77 61
        dcuC 4189702 .. 4189724 -  -9.2  -3.05384   GTCTTCTCCATGGAA           CAATCTGCGT AAA ACACAGACTG           TTTTTGCAACGATAA  63 127
 JC965_20225 4188503 .. 4188522 -   -15   -5.4251   GCGACACATAAAAAA            CGGGAGGC GCTG GCCTCCCG             TTTTGCTTGTCCTTA 100 49
 JC965_20200 NONE
 JC965_20195 4184250 .. 4184281 - -18.1  -4.17089   GCGAAACGCTGAAAA      CGCAGACGCCGGGC ACAGG GCCCGGCGTCTG-G      AAATGAGGGTCGCCA 100 51
        cyoA NONE
        cyoB NONE
 JC965_20170 NONE
 JC965_20165 4178378 .. 4178392 -  -2.8  -3.05715   AACCCGCTCAGTGAA               CCATCA TGT TGATGT               TGAGGTTGTACATGA  43 3
        cyoE 4177408 .. 4177433 - -19.1  -2.52623   CGGCGCCCATAATAG         CAGAGCCGGGA AGAT TCCCGGCTCTG          GATTTCATGCATTTC  91 60
 JC965_20155 4175897 .. 4175909 -  -2.6  -2.66634   GATCTCAGCATAGCA                GCCG CCCAT CAGC                CCGCGCTCTGCGCCG  38 58
 JC965_20150 4175302 .. 4175328 - -11.5   -4.9725   ATGTTCATAGAAAAA         CGCCCCAGGCC ATCGA GACCCAGGGCG         GTGAAGATATCAAAG 100 187
 JC965_20065 4156009 .. 4156026 - -10.5  -3.34398   GCCTCGTGTCAAACA             GGGGGCC GGGT GACCCCC              ATGGCCAGGCTGTCA  70 38
         eco 4155302 .. 4155323 - -10.1  -4.74103   CTCGGAAGCTAAAAA           TAAGGCGCC GTAT GGCGCCTAA            TCATCATCATGACTG  91 64
 JC965_20055 4154719 .. 4154729 -  -6.8  -2.50816   TCGGTATCCATTAAT                 CGAG GGA CTCG                 TCGCTGCCGCCACCG  50 10
        hdfR 4153748 .. 4153763 - -11.8  -4.56358   GACATCCATACAAAA              GGGGCC TGAT GGCCCC               TTTTTCATGTTGTTT  95 101
        tadA 4144080 .. 4144097 - -14.1  -4.37871   TGAAATAAAAGCAAA             CGGGGCC ATCA GGCCCCG              CTGTCATCTTGAGGA 100 16
 JC965_19995 NONE
        pstA 4140011 .. 4140027 -  -3.7  -2.70932   CCGTCTCTGTAATGA              CTGGA TTAATGT TCCAG              CGACCGGAATTTCTC  42 14
 JC965_19985 NONE
        phoU 4138192 .. 4138206 - -11.4  -4.88407   CCATGCAATGAAAAA               GGCGCT CAA AGCGCC               TTTTTATTCAATCAG 100 93
 JC965_19975 NONE
 JC965_19970 4136074 .. 4136108 - -19.5   -3.6682   GGCCAGGCACTGAAA    CGACAAGAGGCCACCC CGGG GGGTGGCCTCTTGT-G     AAACAGGGGATCAAG 100 69
 JC965_19965 4134964 .. 4134977 -  -5.9  -2.52464   GCGCTCCTTAACGCA               GCCGG CTGG CCAGC                GCCTCGATGTGTTCC  48 4
 JC965_19960 4133419 .. 4133444 -  -9.8  -5.65177   ATACGCATAAAAAAA         TCCGAAACCC AACAAG GAGTTTCGGA          TTCTTACACAGCCTG 100 118
 JC965_19890 4122662 .. 4122682 - -11.8  -4.87626   TGCGAAGATGAAAAA            GGCCCACC GTCAT GGCGGGCC            TTCCTCATGGCAGGG 100 57
 JC965_19880 4117534 .. 4117555 - -10.8  -3.60971   ATGTCAATCCTGAAA           CGGGCGCC GCAAGA GGCGCCCA            CACAATCCAAGAGGG  74 89
 JC965_19875 NONE
 JC965_19870 NONE
 JC965_19865 4114394 .. 4114415 - -12.9  -4.75309   GGAAAGGGAATAAAA           CCGGGCGGC CAAG GCCGCCCTG            TTTATTGATGGGTGG 100 27
 JC965_19840 4110424 .. 4110443 -  -4.9  -4.15044   TTCGTTGCGAAGAAA            GTGCCCC GTATGG GGGGCAT             ACCCGCTCAATCCCT  61 32
 JC965_19835 NONE
 JC965_19830 NONE
 JC965_19825 4108625 .. 4108647 - -14.2  -3.64703   GGGTGGCGACTGAAA           CAAGAGGGCA TGG CGCCCTCTTG           TGTGGACTGTGACGG  86 46
 JC965_19820 4106920 .. 4106930 -  -4.6  -2.97408   CGGGACGGAAACAAT                 CAGC GTG GCCG                 GGATGGTAACAGATA  46 68
 JC965_19815 4105580 .. 4105607 -  -3.2  -3.97043   GGGAAGAGAGAACAA        GGGGGAGCCCGG CTGG CCAGGGTGACCC         CCGAGAGAGCCTGTC  56 44
 JC965_19810 4104109 .. 4104135 - -16.6  -4.87665   CCGCACCGAGAAAAA         CGGCGCAGCC GATGGCT GGCTGCGCCG         GCTGGCCCGTCAGCG 100 35
 JC965_19805 NONE
 JC965_19800 4102457 .. 4102479 -  -5.5  -4.18697   AAAATGACCCGAAAA          GGCCGGTGAA GCAG TGC-CCGGCC           TGTGTCTTCTCAGTT  64 97
 JC965_19795 4101796 .. 4101808 -  -4.7  -3.87104   GCGATACGAGAACAA                CAGGC GGC GCCAG                TGTATTTCATCCGGA  59 96
 JC965_19790 4100867 .. 4100900 -  -6.8  -3.91897   CTGTCCACTGATAAA    TGGGCCTGCTTGCCAC AGGA GTGGCAAG--GGCCAA     CGAGAGGGGAGCAAG  66 374
 JC965_19770 4099211 .. 4099232 -  -4.3  -3.57144   CCTGTGACTCCTAAA           GGCTCAAGG ATTT CGATGAGCC            GTTAACATGGTTATT  54 36
 JC965_19765 4098704 .. 4098723 - -13.6  -5.38054   TGGCAGAAATAAAAA            GAGGAGGC AAAT GCCTCCTC             TTGGATGGGAATGGG 100 47
 JC965_19760 NONE
 JC965_19755 NONE
 JC965_19750 NONE
 JC965_19745 NONE
        radC 4096413 .. 4096427 - -11.4  -3.61178   CGCAGCGATCCCAAA               GCAGGG AAA CCCTGC               TGAGTTCAACAATTG  77 197
 JC965_19720 4093402 .. 4093417 -  -3.2  -3.04263   ATTGGACCTCCAACA              GTTGTC AGTT GACAGC               TGGCCATTATATCAT  42 50
 JC965_19715 NONE
 JC965_19710 4090988 .. 4091017 - -16.5  -3.69702   TATCATTCAAGATAA       GTTCGTGGCGGGT TGTG AACCGCCACGAAC        CTGACTATCAGGCCT  95 33
        queD 4090135 .. 4090150 -  -3.3  -3.93695   TGCATCACTGATAAA              TGCAT TTATTG ATGCA               ATTAGTGATCGGACC  56 88
 JC965_19680 4084808 .. 4084821 -  -3.8  -2.68755   ATAAGGAGCACAGGA               GAGG CCAGCT CCTC                CCGTATCAAACATTC  42 61
 JC965_19675 4084057 .. 4084067 -  -4.6   -2.9953   TGAATGACAATCAGA                 GCCG CAT CAGC                 TGACGGAATGCCTTG  46 10
 JC965_19670 4082698 .. 4082719 - -17.3  -3.70902   CCCTTGACATGCAAA           GACCCGGGC CAAG GCCCGGGTC            TTTTTTTATGATTTG 100 55
 JC965_19645 4078501 .. 4078538 -  -3.6  -2.71263   AAGTTCGCGTAAGCA  TC-TACTTCGTGGCCG GTTTCTCT CGGCC-CGAAATACGA   ACTCTGGCAGGTCTT  42 227
 JC965_19640 4076560 .. 4076580 - -18.3  -4.66537   GGCGCCAATAGAAAA            GGCCCTGCC AAT GGCAGGGCC            CCTGATTTTTCAGAT 100 54
 JC965_19635 4075685 .. 4075699 -   -10  -2.64416   GACCGGGATGAGAAG               GACGTC AAC GACGTC               GACGCCTGATATTCA  62 38
 JC965_19565 4061174 .. 4061187 -  -6.7  -2.69674   ATAGACATGAGAGCA               CTCCT GAAA AGGAG                CATGAGATCACAGCC  50 207
 JC965_19555 NONE
        glpK 4057881 .. 4057904 - -16.8  -5.06414   GCTCGCCAATAAAAA          GAGGCCGACA TCGC TGTCGGCCTC           TTTGCTTTTTTCATC 100 64
 JC965_19540 NONE
 JC965_19535 4055557 .. 4055580 -  -6.6  -4.03978   AATGGGGCACATAAA          TGCCACCGAC AAAG GGCGGTGTCA           GGTGATAGCTAGATT  68 360
 JC965_19530 NONE
        dkgB 4054050 .. 4054070 - -16.9  -5.72616   ATTGAGACAAAAAAA            CGGGAGGCA CAG TGCCTCCCG            CTCAGGTTCTCGTCG 100 239
 JC965_19520 4052525 .. 4052545 - -13.3  -5.14563   TTGCCCATGAAAAAA            GGCCGACAC AGG ATGTCGGCC            TTTTGCTTGCCCGGG 100 43
 JC965_19470 4040559 .. 4040580 - -15.9  -3.67611   CTTACGGCAAGACAA           GGGCCACTC CATC GAGTGGCCC            ATTTTCATGCAAAGC  91 71
 JC965_19375 4019732 .. 4019750 -  -2.3  -4.74917   ACCAAAGACACAAAA             GCCCCGT ACGAG ACGAGGT             ATATGGCAGGGGCGG  69 29
        secE NONE
        nusG 4018700 .. 4018732 - -15.8  -4.67607   TCCCCAACAAATAAA     GGGGCAGCGAATTAT AGAG ATAAT-CGCTGCCCC      TGACAACCGTTAAAC 100 54
        rplK NONE
        rplA 4017443 .. 4017478 - -15.8  -2.61467   AAACCCCCAACCAAT    CAAGGCGCAAAATTATA GAT TA-AATTTTGCGCCTTG    TAAAACCCATCAATT  82 39
        rplJ 4016718 .. 4016729 -  -5.8  -3.54626   GAATAAACTCAAACA                GCCT AGAT AGGC                 GAGAATCAAGCAGCA  58 31
        rplL 4016254 .. 4016279 - -16.3  -4.64766   TCTACAGCGCAAAAA         GGCTGGTGAAT AAAG ATTCACCAGCC          TTAGCCTGTTTTATC 100 64
        rpoB 4012053 .. 4012068 -  -6.2  -3.63569   TCAATTCTCGAACAA              TAAGAG CGAG CTCTTA               CTCTTCGTCCAGCTC  58 23
        rpoC 4007565 .. 4007590 -  -9.8  -5.65177   ATACGCATAAAAAAA         TCCGAAACCC AACAAG GAGTTTCGGA          TTCTTACACAGCCTG 100 116
 JC965_19330 4006135 .. 4006165 -  -6.7  -4.07568   CCCCTGGCGGCAAAA       GCTCGCCGTGTTG TTTGG CAAACCGGCGGGC       CCCACCAGCGGTTGA  68 89
 JC965_19295 4000553 .. 4000571 -  -2.5  -3.04322   TTCAAGGCGGCAATA            CTT-GTCA AAGT TGACGAAG             CGGATTGAGTCGCGG  41 11
 JC965_19290 3999446 .. 3999469 -  -6.7  -3.53444   TGACGCTCCCCGAAA          GC-GGCTGGC TCCCC GCCAACCTGC          CGAGGGGTATTACGA  58 250
        yejK 3993124 .. 3993147 - -18.2  -5.27335   CCCCTTAAATAAAAA          GGCACCGGAG CGGA CTCCGGTGCC           TTTTTGCAAGAAATG 100 55
        malE 3991565 .. 3991588 -    -8  -2.94622   AGAGAGATTGAGAGA          GTGGGAGGCC CGAA GGCCTCCCGG           GTAGTGCATGCTTAC  58 37
        malF NONE
        malG 3988928 .. 3988965 -  -4.7  -2.73159   TGAATCTTTGCAAAT   CGTGATGACGGGGGGAG CCAG CTCCCCCGGCCATGAAC    CGTTAACCTTTCACG  44 28
        ugpC 3987696 .. 3987713 - -12.7  -5.07486   GACGGGCAATAAAAA             GCCGGTC TTGC GACCGGC              AAAAGGCATTGAACG 100 73
 JC965_19235 3985726 .. 3985751 -  -9.8  -5.65177   ATACGCATAAAAAAA         TCCGAAACCC AACAAG GAGTTTCGGA          TTCTTACACAGCCTG 100 114
 JC965_19195 3978719 .. 3978737 -  -2.5  -3.04322   TTCAAGGCGGCAATA            CTT-GTCA AAGT TGACGAAG             CGGATTGAGTCGCGG  41 11
 JC965_19190 3977574 .. 3977632 -  -7.8  -3.31144   GTCCGACGGCCAGAA TCTGGTGCGCGGCCTTGCGCTCCTGGCC GAA GATCTGGAGCGCAGCGCCGATCACCTCA ACATCCGCCTGACCG  59 253
 JC965_19175 NONE
 JC965_19170 3974845 .. 3974866 -  -8.7   -3.2614   CAGTGGCGACAGCAA           GTCACGTCA CCAG TGCCGTGAC            TGCAGCGAGTCGCCA  65 75
        pdxY 3973358 .. 3973383 -  -5.9   -2.9155   GGCTGGAAGATCACA         CCCGGGGGTTC AGGG GCTCCCCCCGG          TACCAGGAGTGGAAG  48 162
 JC965_19140 3970342 .. 3970368 - -17.4  -4.22858   ATAATAGAGAAAGAA         GATGCCTCCCCA GGT TGGGAAGGCATC         GCGATCAACGGGTCT 100 30
 JC965_19135 3969762 .. 3969784 -  -3.2  -4.15453   CAATTTATGGCAAAA           GCGCCGATGC TAA GCCTTGGGGC           CGAACCTCGTCAAGG  58 12
 JC965_19130 3969262 .. 3969275 -  -9.5  -5.64873   CTGAACAACAAAAAA               CCGCC CGAG GGCGG                TTTTTTCATGCTCTA 100 47
 JC965_19115 3966165 .. 3966178 -  -2.3  -3.98826   GGACGAAGCCAGAAA               CGAAC ATAA GTGCG                GGCAGTGTAGCAAGG  54 132
 JC965_19110 3965045 .. 3965060 - -11.8  -5.14563   CCCCCCATGAAAAAA              GGGGCC CTGA GGCCCC               TACTCACCATCCGTT 100 60
 JC965_19105 3964160 .. 3964176 - -12.3  -2.53715   CTGATGAGGATTAAT              CCAGAGC GCG GCTCTGG              CCCTTGATGGCCTCC  70 4
 JC965_19090 3962982 .. 3962998 -  -3.7  -3.37236   AATGGAAGGTTACAA              GACCT TGAAAGC AGGTC              AGGCAGTCAACTTTG  48 127
        clpS NONE
        clpA 3959955 .. 3959974 -  -9.2  -5.18357   GAATTCAGCAAAAAA            CCCCAGCC TCTC GGTTGGGG             TTTTTTGTCATTTCC  95 55
 JC965_19055 3957745 .. 3957757 -  -4.8  -3.03124   CTTCACCGTTCAATA                GGTC TTGTC GACC                CGCACCCCATCGCTG  46 7
         lrp 3953388 .. 3953414 - -16.7  -3.79678   AACTCTCTATAAGAA         GAAACGAGCGG ACCGG CCGCTCGTTTC         TGACTATCGTGACTC 100 75
 JC965_19030 3950730 .. 3950754 -   -15  -4.37092   AGGTTCTCGATAAAA          GGCCACGCCC GCAGA GGGCATGGCC          AGGATGATGTGAGGC 100 41
        lolA 3950070 .. 3950084 -  -2.1  -3.46602   CCGGTCAGACGATAA              CA-CCG GTAA CGGCTG               GCTCATCAGCGCTGG  46 31
 JC965_19020 3948247 .. 3948261 -  -8.6  -3.53224   CATCCCCGGGCCAAA               CGAGAT AGA ATCTCG               CCCAAAATCGGGTTT  64 449
 JC965_19010 NONE
 JC965_19005 3945315 .. 3945325 -    -4  -4.05747   GACAGGCTAGAGAAA                 CAAT TTT ATTG                 CGGTTCAGCCCTGAT  60 377
 JC965_18995 3943105 .. 3943128 - -12.4  -2.87132   GCCCGTTGGCATAGA          CAGTCGGGGG CGGA CCCCCGAATG           ATCAGGAGGAGTGCG  71 27
         pyk 3941487 .. 3941504 - -12.7    -5.626   GATCCCATAAAAAAA             CGGCTCC CGCG GGAGCCG              TTTTTGTGGCAGGGA 100 51
         rrf NONE
 JC965_18955 3933323 .. 3933342 - -13.6  -5.26875   TCGGGAACGAAAAAA            GCCCAGTC TTTC GACTGGGC             TTCTGAAGTAGTGGC 100 37
        tcdA 3932281 .. 3932314 - -19.7  -3.85698   TTGGGGCTCGAGAAA     CACCTGAGCCCGTCGC GAG GCAACGGGCTCAGG-G     CAATCGTGTTGGCAA 100 82
         rep 3928401 .. 3928411 -  -6.8  -4.14472   GCAACAGTTGCAAAA                 GCTC ATC GAGC                 TTGGCTGCGCCCTCG  69 131
        rfaD 3921227 .. 3921243 - -10.1  -3.16191   CCAGAGGGGGATCAA              GCCCGGT TCA ACCAGGC              CATGTAATCGGCCAC  66 5
 JC965_18900 NONE
 JC965_18895 3918622 .. 3918680 -  -4.9  -3.75461   TAAATTTCGACCAAA TCGTTGCAGCGGCGCTAGCCNGGACGC CGGAC GCTTGCGGGCCGGCGGCGGTGCACCGG GGCCGTCGCTGGAAG  57 280
 JC965_18860 3915083 .. 3915103 - -16.9  -3.71649   GCCGGAAATGCGAAA            GGCCAGCTC AAT GAGCTGGCC            TTTCTGAAAAATGGC 100 37
 JC965_18855 3913416 .. 3913438 - -17.8   -4.1891   GGCTTGCAATAGAAA           GAGGGAGGCA TCA TGCCTCCCTC           GATTTTTTGTCCTGA 100 122
 JC965_18845 3910402 .. 3910419 - -12.7  -4.28111   CACAGGATGAATAAA             GGCGACC CCGG GGTCGCC              TTTGTCACATCCGGG  93 48
        yqhD 3907068 .. 3907106 - -19.5  -3.51032   ATTTTGCAACGATAA  GGGGGCCGCGTCCCCGCC TGCT GGCGGGTTCG-GGCCCCC   TGGTGCAACCGGGCC 100 67
 JC965_18820 NONE
        pntB 3903580 .. 3903595 - -11.8  -5.41143   CAGCGCCTAAAAAAA              GGGGGC CGAA GCCCCC               TTTTTGTCTCATCCG 100 49
 JC965_18800 3901345 .. 3901373 - -17.5  -3.60234   GCACACACGCCCAAA        CAGAAGGGGAGCC CAT GGCTCCCCTTCTT        GCATTCAGACGTCCG 100 53
        puuR NONE
 JC965_18765 3892503 .. 3892527 - -12.1   -5.0538   GTTGACGGCAAAAAA          CGAGGGAGGCA TAA CGCCTCCCTCT          TCTTGTTGCCGCCAG 100 65
 JC965_18730 NONE
        yfcE 3886167 .. 3886198 -    -8  -3.44051   CGCTCAGGACGACAA      CCTCTCCCAG-ATGC AAG GCTTGCTGGCAGAGG      AGTTCGACCTCCTCA  60 413
 JC965_18705 NONE
 JC965_18700 3883061 .. 3883094 -  -8.9  -2.64107   GAAATTGCCATAGCA     CACCTCCTGCTTCAT GAAT ATTTAGCAAGAGGTG      TGCCAAGAGGGTATT  59 49
        flgB NONE
        flgC NONE
 JC965_18685 NONE
        flgE 3880018 .. 3880035 - -14.1  -3.61609   GGACGGAAATGACAA             GGGGCGC CGAA GCGCCCC              TGCCAACTACCCGCC  86 44
        flgF NONE
        flgG NONE
        flgH 3877676 .. 3877690 -  -2.7  -2.74144   TCTTGAGTCTTAAAT               GGGCC ACCAG GGGCC               GTTGAAGAAGCTGGT  41 5
 JC965_18660 3876523 .. 3876536 -  -3.8  -2.93149   GAAATTACAGAATGA               CCAG TTGGCC CTGG                ATCGCGCCCGCCTGC  44 1
        flgJ NONE
 JC965_18650 NONE
        flgL 3872101 .. 3872136 - -25.6  -3.72576   GGGCCTTTCATGAAA    CG-AGGCTCCCCCGTGC GTG GCACGGGGGAGCCTGCG    GTCAACGGATGAACG 100 41
 JC965_18615 NONE
 JC965_18610 3868082 .. 3868092 -  -4.6  -3.14931   CTCATCCTGGACGAA                 CCCC AGC AGGG                 ACTGGATCCCCTCAA  48 228
 JC965_18595 3863071 .. 3863085 -  -4.2  -3.26428   CAACAAGGAACTCAA               CAAGCC CTG AGCCTG               CTCGCCCCGCGAGTG  49 151
 JC965_18585 3861031 .. 3861049 -   -11  -6.11243   ATGGAATAAAAAAAA             TACCGGTC AGT GACCGGCA             TTTTTGCTGGAGAGG 100 49
 JC965_18545 NONE
 JC965_18540 3850830 .. 3850866 -  -8.5  -3.25823   GGTGTCGTACAGGAA    GCCGCGCCACTTGGGCC CAC GGGCCAGGTAGCGCTCC    AGCACGTCACGGGCG  62 342
 JC965_18525 3848067 .. 3848090 -  -3.8  -3.76224   GCCGCATTTATCAAA          CTCGGTGAAT CAGG AATCACCCAG           TTTGAAAGACGCTTA  55 49
 JC965_18520 3846680 .. 3846699 -   -15  -5.40072   CCTGCTGCAAAAAAA            CAGGGCCC CGCA GGGCCCTG             TCTGTGCTGACGACC 100 44
 JC965_18515 3845032 .. 3845047 - -10.4  -4.73388   AAGGCTCATGAAAAA              GGCTCC CGCG GGAGCC               TTTTTGTTGTCTGTC  95 58
 JC965_18505 3843187 .. 3843217 - -21.4  -2.62933   TAAGCCCCGACACCA       TGAAAAAAGGCGCC TCT GGCGCCTTTTTTCA       TGTCGTCAAACCTGC 100 42
 JC965_18470 3836970 .. 3836980 -  -4.6  -3.08344   CTGAAAGGAGATATA                 CCAG TGC CCGG                 CTGCTTGGCTGACGG  47 113
 JC965_18425 3829280 .. 3829299 -   -15  -4.72986   CAGGGGCATGAAAAA            GGCAGCCC ATGG GGGCTGCC             TGCACTGATCAAGGG 100 64
        fdhD NONE
 JC965_18410 3825127 .. 3825144 - -12.7  -5.60993   TCGGCCATAAAAAAA             CCCCTGC CATG GCAGGGG              TCGGACGGTATCCAT 100 50
 JC965_18395 3820875 .. 3820887 -  -9.1  -2.62616   GCATTGGGCAGACGA                GGTGC GGC GCACC                GGGCCCGTTACAGGG  59 33
 JC965_18385 3818713 .. 3818737 -  -4.1  -3.02144   GCAGCTGTGGCAAGA          GAGCGCCGAGG CCT CCTCTCTGCTC          GATGGGGTGTGCGAG  45 263
 JC965_18375 3815673 .. 3815688 - -11.8  -4.27316   GGGGGCAATGGAAAA              GGCGCC CGAA GGCGCC               TTGATGAGAGACAGA  90 54
         nfo 3814187 .. 3814212 - -14.7  -3.17075   CTGGGTCGAACCGAA         CGCCGCC-CGCA GCT CGCGCGGCGGCG         GCAGCAGGGGCAGGC  81 503
 JC965_18340 3808520 .. 3808536 - -13.7  -4.75518   GACACAAAAGCAAAA              GGGGAGC CAG GCTCCCC              TTTTATCACAACCTC 100 46
 JC965_18335 3807932 .. 3807970 -  -8.8  -2.66634   CACCCTATCACAGGA  GCGCGACACG-GGGTGA CTCAAT CCGCCGTCGTGTCGCGC   TGCCACACCAGGGGC  59 4
 JC965_18330 3807141 .. 3807176 -    -4  -2.56571   CAGAGAGTGAAGGGA    TTCAGGAG-GAGGGGGA CGC TCCCCCTCCCTGGTCAA    ATGGGGTTATTGGCA  42 32
        rsmE 3806264 .. 3806289 - -12.6  -2.57132   CTCCCCCTTCACAAG         GGGGAGGG-GC CTGTT GCTCCCTCCCC         TGCGAAGGGGAGGGC  73 58
        gshB 3805197 .. 3805213 - -10.8  -3.64822   AGGGCGGCAGTCAAA              GGGGCC TTCAC GGCCCC              TTGTGTGTGTGTCCT  74 60
 JC965_18315 3804485 .. 3804505 -  -4.6  -3.93984   AAATGGATGGATAAA            TGAAGGGG GAAGA CCCCTCCC            TGCCTCCCCCTGCTC  59 59
        ruvX 3804016 .. 3804031 - -10.4  -2.74334   TGAAAGAGAAGCAAG              GGGGAG GAGG CTCCCC               GGTTTAGTCGTACTG  66 29
         tal 3797536 .. 3797560 - -13.6  -5.65177   ACAGGCACAAAAAAA         CCGGGCTGCCC TTTC GGG-AGCCCGG          TTTTTGCAGCGCCAC 100 73
 JC965_18285 3797160 .. 3797212 - -22.2  -2.62983   TGCAGCCTGACAGGA TCACCCATAAAAACAGCGCCCCGG TCAAT CCGGGGCGCTGTTTTTATGGCTCC ACTCGCTGGAGTGAA 100 61
 JC965_18260 NONE
        yehT NONE
 JC965_18250 3790016 .. 3790035 -   -15  -3.91084   GCAGCGCCAATGAAA            GACCCCGC CGAG GCGGGGTC             CGAGGAGGGCTGGAC  95 44
        pepE 3789017 .. 3789041 - -15.7  -4.25104   CCGCCGGCAGGAAAA          GGGGCGAGGGA AGA TCCCTTGCCCC          TCACAGCATGGCAAA 100 57
        fumC 3787423 .. 3787438 -  -8.2  -4.41494   GATCTGCAATGAAAA              GGGCGC CATG GCACCC               TTTTCATCTTTATTG  79 189
        putA 3782573 .. 3782596 - -18.2  -4.06993   CCAGAGACGAAAGAA          CAAGCCCCGC ATCT GCGGGGCTTG           AGTCTCCGTCACTAT 100 48
 JC965_18215 3778537 .. 3778554 - -12.7  -5.08601   TGATGGCAATAAAAA             GGCGACC CTGA GGTCGCC              TTGATGAAATGGGTC 100 50
 JC965_18180 3772092 .. 3772107 - -11.8  -4.75372   ACCAGGCAGCAAAAA              GGGGCC CGCG GGCCCC               TTTTTCATTCACTTT 100 49
 JC965_18165 NONE
 JC965_18160 3767034 .. 3767047 -  -9.5   -5.2166   CAAGAATTGAAAAAA               CCCGC TTCG GCGGG                TTTTTTGTTGCCCAT 100 131
 JC965_18135 NONE
 JC965_18130 3762567 .. 3762580 -  -3.9  -3.46205   GAAATCAATGTACAA               TTACA ATAC TGTAA                TTTTTCTCAATGCGT  50 86
 JC965_18125 NONE
 JC965_18120 3759681 .. 3759691 -  -6.8  -3.52652   CTTATGTAATCAGAA                 CCAG AAT CTGG                 CACCTGCAATAAATC  58 9
 JC965_18115 3759055 .. 3759104 - -26.9  -3.24017   AAGTTTAGAACTGAA TTATGAAAATCAAAGAGGGGCCT GAAC AGGCCCCTCTTTGATTTTCATAT AGGCTCAGATAGCCT 100 42
 JC965_18105 3757449 .. 3757459 -  -8.2  -2.62184   CTTCGCGTCACAGGA                 GGGG GAT CCCC                 ATTACTGGGTGATAG  56 27
        ylqF 3750458 .. 3750478 - -18.3  -3.44051   GCGCCATGACCAGAA            GAGGCGGCC CAG GGCCGCCTC            TTCTTGCTATCAAGC  95 65
 JC965_18065 3749007 .. 3749028 - -15.9  -4.77036   GCCCATGACGAAAAA           GAGGCGACC CTTG GGTCGCCTC            TTCTATATCCGTGCA 100 65
 JC965_18045 3743561 .. 3743590 - -10.7  -5.03145   GAAGGGGCCAAAAAA       CAGAACGGCCAAG CAAG CTTGGCCGTTCAT        CAACTAAATCAGCGC 100 51
 JC965_18040 3742401 .. 3742419 -  -5.2  -4.86731   GGTTGGCAAACAAAA             GCGCCC GTCCAGG GAGCGC             TTCGTCAGCTCTTTA  80 85
 JC965_18035 3740946 .. 3740972 - -10.8  -5.32882   TATCAGGACAAAAAA         TCGAGGGAGGCA TGA TGCCTCCCTCTT         TCTATTGCAAGCCCC 100 206
 JC965_18000 3735805 .. 3735819 -  -4.2  -2.80988   TCACAGTATCAATCA               GCGC CCATGTT GCGC               TTTCCACGCGATAAA  44 8
 JC965_17995 3735309 .. 3735319 -  -6.8  -2.62184   CCGGGGCCCAGATCA                 GCAG GCG CTGC                 CAGTTCGCTCACACA  50 178
 JC965_17985 NONE
 JC965_17980 3732679 .. 3732698 - -12.2  -5.81412   CGTACGCAAAAAAAA            TGAGCCTC GATA GAGGCTCA             TTTGGGGCGATGCAA 100 64
 JC965_17975 3732226 .. 3732244 -   -16  -5.38054   GCGCAGAAACAAAAA             GACCGGCC AGT GGCCGGTC             CAAACAGACAGCGTG 100 82
        katG 3729560 .. 3729579 - -13.6  -5.28778   AGCATCGATAAAAAA            GCCCGGTA GTGA TACCGGGC             TTGGTGGTCGAGCAG 100 51
 JC965_17965 NONE
 JC965_17960 3726310 .. 3726325 - -10.4  -5.29445   CCGCAATAAGAAAAA              CCGACC TGAT GGTCGG               TTTTTTGTTTTGGCT 100 140
 JC965_17905 NONE
        uvrA 3711282 .. 3711295 -  -9.5   -5.4505   CCGGCCAACAAAAAA               GGGGC CTTG GCCCC                TTTTTCTCGAGTGAC 100 43
 JC965_17895 3710067 .. 3710088 -    -5  -4.42653   ATGGCAGGCAGAAAA           GGGCCCGA ACAGAG CCGGGCCA            AAGAGACATGCTTGT  70 72
 JC965_17890 NONE
 JC965_17885 3706450 .. 3706469 -   -15  -4.24204   CACGCAGATGCAAAA            CGGGAGGC CAAG GCCTCCCG             TTCTTCATGGTGAAC 100 43
        metF 3704367 .. 3704388 - -13.1  -5.45802   CGCCCAAAACAAAAA           GCCAATGAG AAGA CTCATTGGC            TTTTCTGTATCAGAG 100 48
 JC965_17860 3701058 .. 3701084 -  -7.2  -2.78463   ATCCTCGGGATGATA         GCCCGTGTATCC CTC GGACACAGTGGC         AGAGCCCTGCAGATA  52 239
 JC965_17850 NONE
 JC965_17845 3697958 .. 3697979 -  -5.9  -3.19192   TCTCATTCAACCGAA           GTTGAATCA GCAC TGATGCAAC            GCATCAGGTCTTTGC  52 101
 JC965_17840 3697532 .. 3697546 -  -7.2  -2.98545   GTTGTACAACAAGGA               CCAAAT AAA ATTTGG               TTTTCGCCAAGAAGT  56 185
 JC965_17835 3694573 .. 3694589 -  -5.1  -2.57931   CTCATTCGCTACAAG              CCCAGAA CAC TTCTTGG              GTGTTGTATGGTTAA  46 33
         rrf 3694326 .. 3694344 -   -16  -5.10461   TTCAGGCAATAAAAA             CCCCGCTC AGT GAGCGGGG             TTTCTTGTATTGGGT 100 41
        istB 3691454 .. 3691471 -  -2.6  -3.67864   CAACCCAAGGTCAAA             GAGGCC TTGCAT GGCATC              TGGATGGCCGAGATG  48 119
 JC965_17810 NONE
 JC965_17805 NONE
 JC965_17800 NONE
 JC965_17795 3686450 .. 3686464 -    -7  -2.78725   AGAGTCCAGCAACCA               GCCTCC CAC GGCGGC               CCCGAGTGTGATGGC  51 203
 JC965_17785 3685551 .. 3685567 -  -6.7  -2.94912   TTTCGAAGTGATAGA              TTCAATT TCA AATTGAA              ATTTGTATAGCTACA  53 107
        srlA NONE
 JC965_17775 NONE
 JC965_17770 NONE
        srlD 3682083 .. 3682103 - -14.1   -5.4251   CTCACACACAAAAAA            GGCAGTGTT TGG AACACTGCC            AAAAGATAGAACCCC 100 52
 JC965_17760 3681611 .. 3681627 -  -2.3  -3.12142   GCGAGATTCAATAGA              CATAG CAGTCCT CTATG              ACACCTGATTTTTTT  42 102
 JC965_17755 3680857 .. 3680871 -  -6.4   -2.7314   CGGCAAATCAGACCA               GCATCA CCT CGATGC               CATATTGTTCTAGTG  49 3
 JC965_17750 3679375 .. 3679392 -  -4.1  -3.52073   TCCTGAATACTACAA             GCAGG GAAATCGA CCTGC              GCAAGCTGCTTGATG  51 470
        istA NONE
        istB 3675635 .. 3675652 - -11.3  -5.37593   TGTCAAATTAAAAAA             CCCAGCA TTTC TGCTGGG              TTACGGTCACTTTAG 100 478
 JC965_17725 NONE
 JC965_17720 3673142 .. 3673164 - -10.6  -3.95036   AAGTAGCGTAAACAA           GACACCGG TTTGAGG CCGGTGTC           AGGTGATAACTAGAT  79 24
 JC965_17680 3666589 .. 3666600 -  -7.2  -3.39327   GGCTGATATGGACAA                CGGC GCGT GCCG                 CTATCTGGAATGTGG  61 37
 JC965_17675 3666398 .. 3666438 -   -15  -4.20707   CGGCATCAAAAAACA GACAACAAAAAGCCCACTC GCAG GAGTGGGCTTTTTGT-GTG  AAGACTGGAGCGGGC 100 31
 JC965_17665 3664756 .. 3664776 -  -8.1  -2.59431   GGCGCTGACAATCCA            CCGGCCGGG TGC CCTGTCCGG            ATGGCGGGGGGTCAT  56 42
 JC965_17660 3663917 .. 3663927 -  -4.6   -3.1372   TACCGGCTATCAATA                 CCCG CTT CAGG                 ATGACATCAGCCTCT  48 304
 JC965_17650 3663088 .. 3663105 -  -6.9  -4.88736   CATCAGGCACAAAAA             GGGACGC CATG GTGTCCC              TTATCACATTCTTAT  84 90
 JC965_17640 3660243 .. 3660265 - -10.6   -5.5074   CAATCCAACAAAAAA           GCCCGTAC TGGGTGG GTACGGGC           CTTTTTCTGATTTCT 100 197
        thrA NONE
        thrB NONE
        thrC 3655404 .. 3655431 - -14.2  -5.71712   CCGGACATAAAAAAA        TCCCCCGCTCTC GTGA AAAAGCGGGGGA         TCGTCAGCGTCTCAT 100 47
 JC965_17620 3654689 .. 3654703 -  -2.7  -4.50058   GAGGTACAACCAAAA               CGGGG AGTTG CGCCG               TGGGCTGCGCTGTGA  64 227
 JC965_17615 3654087 .. 3654105 -  -6.7  -5.45652   ACCGGGAATAAAAAA             CCATCCC GCTTT AGGATGG             TTTTTTATGGATGAC  91 62
 JC965_17560 NONE
        ilvM NONE
 JC965_17550 3640367 .. 3640401 - -15.1  -2.53263   CGGATCGGTAATCGA    TCCTGGTGAAGGCACC TCGG GGAGCCTTCACC-GGA     AGCGACTCGGGGAGG  80 62
        ilvD 3638369 .. 3638411 -  -5.5  -3.48395   ACCTTGCGTAGATAA TCCGCCGCAGAGACCATGGT TTAT ACCCCCGTCTC-GTGGCGAA GGGCGCGCAATGCGC  54 64
        ilvA 3636803 .. 3636821 - -13.2  -5.60993   TTGCCCATAAAAAAA             CGAAGAGC CGG GCTCTTCG             TTTTTCATCTGGCAA 100 57
        ompA 3635423 .. 3635450 - -21.4  -4.07868   TCACACCCACATAAA        CAACGAGGGGGC CAAG GCCCCCTCGTTG         TTTAATAGCAAGGCA 100 49
 JC965_17525 3633862 .. 3633872 -  -6.8  -3.28712   TCGCGCCGCCGAGAA                 GCTG GCC CAGC                 TCTACACCCAGGTGG  55 489
        rpmE 3631726 .. 3631742 - -11.5   -5.5604   TGAACCAATAAAAAA              GGCACCC GAT GGGCGCC              TTTTTCAGAATTCTT 100 52
 JC965_17500 3631047 .. 3631057 -  -8.2  -2.62184   CTTCGCGTCACAGGA                 GGGG GAT CCCC                 ATTACTGGGTGATAG  56 27
 JC965_17490 3626944 .. 3626962 -    -6  -3.48395   AGCTGCGCGAGAGAA             CCGGTA TCGCCAT TACCGG             CCCCCACAAGGAGGA  55 410
 JC965_17465 3621741 .. 3621759 - -10.2  -3.75105   GCAAGCCATCAAGAA             GCCCGCGA TCG TAGCGGGC             TTTTTTTATGCGGCC  77 399
 JC965_17450 3618266 .. 3618282 -  -7.9  -2.87344   GATGCTGCGCATAGA              CCTGGGC ATC GCGCAGG              GCGGAGAGCGTGCCG  54 250
        apbC 3614348 .. 3614367 - -10.7  -4.82667   CCATTATATGAAAAA            GGGGTGG CCATGC CCACCCC             AAATCCGTCCCCCTT  95 54
         udk 3613616 .. 3613632 - -11.5  -5.53991   GATTCATTAAAAAAA              GCCGGGC ATC ACCCGGC              TTGTTTTCTCTCAAC 100 36
         dcd 3612949 .. 3612968 - -13.6  -5.36441   TTGTCAGATAAAAAA            GAGGGTGC CTTG GCACCCTC             CTCGATAGACAAGCC 100 55
 JC965_17420 3611164 .. 3611177 -  -9.5  -5.38249   ATGAACCACAAAAAA               GGGCC CGAA GGCCC                TTGTTTCATTTCCAA 100 53
 JC965_17405 3609577 .. 3609608 - -10.9  -4.43208   ATATCCGGAAAGAAA     GGAGCGGGAAAGCGC CTTG GCGC-CTCCCGC-CC      GGCCTAGAGGGGGAA  88 29
 JC965_17400 3609023 .. 3609043 -  -3.3  -3.13403   GGCTCTTGATGAATA           GACCCTGA ATGGCA TC-GGGTC            CTATTTGTGCTCCGC  43 26
 JC965_17395 NONE
 JC965_17390 NONE
 JC965_17385 NONE
 JC965_17380 NONE
 JC965_17375 3602548 .. 3602558 -  -2.4  -3.75665   TGAGAGGTCATCAAA                 GCGG CGC CAGC                 ACGGTCATCAGCGCT  51 10
 JC965_17370 NONE
 JC965_17365 NONE
 JC965_17360 3598130 .. 3598149 - -13.6  -3.67597   GCCCCGATGCAAGAA            GCCCTGTC CATG GACAGGGC             TTTTTCATTGCAGGG  84 43
 JC965_17340 3594622 .. 3594635 -  -3.7  -2.74523   TGAGCGGCAACATCA               GCAGG CCCC CCGGC                AGACGTCAGCCATGG  43 31
 JC965_17335 3592036 .. 3592050 -  -4.2  -3.61654   CACAGGGACCGTAAA               GAGGAC AAG ATCCCC               CTCACCCTGGCCCTC  54 168
 JC965_17330 3590911 .. 3590923 -  -4.1  -4.18018   TCTGTTGAGTGAAAA                CTCAC CCA GTGAA                TGGAATTTGAATGAT  60 69
 JC965_17325 NONE
 JC965_17320 3589836 .. 3589849 -  -3.7  -3.93664   ATCGAATACATGAAA               GCCAG CATC CGGGC                CAAGGTGGAGCACCC  58 226
 JC965_17305 3587056 .. 3587071 - -10.4  -4.72272   TTTGGGTATTAAAAA              TGGGGC CGCA GCCCCA               TCAGTATCAGTCAGC  95 160
 JC965_17290 NONE
 JC965_17285 3584579 .. 3584596 - -14.1  -4.00782   CGAGACGATCACAAA             GGGGCGC CACG GCGCCCC              TTGTCACAACCCATC  95 46
         udp 3580990 .. 3581022 -   -12  -3.88583   CAAACGGCGGATAAA     GATAGGGGCCG-CGC TTTC GCAACGGCCCCCACC      CCCCACTCGGTGTGG  85 46
        rihA NONE
 JC965_17250 3578504 .. 3578527 - -19.6  -3.58726   TGCTCCCATAGAGAA          GGGGCCAGCC TTGC GGCTGGCCCC           TTTCTTGTCTGGCCT 100 66
 JC965_17230 3574959 .. 3574985 - -19.5  -4.18018   CGGGCCTATGTAAAA         GGCCACCTCCC GAGCA GGGAGGTGGCC         TTTTTGCATCATCTA 100 90
 JC965_17195 3568362 .. 3568408 -  -2.9  -2.66517   AGTCATCAATAACAT TCATGCCGATCATGGTTTCCC ATAGA GGAAAAAAGTGATCGGCCTGG GATGTTATTGGGCGA  40 53
        istB 3565632 .. 3565648 -  -2.1  -3.22298   TTGATCCACGACCAA              CGTATCC GCC GGGTGCG              TGAGCGAGACCTATT  44 324
 JC965_17175 3564571 .. 3564583 -  -5.5  -3.17723   CCAGCGCGAATTCAA                CGCCA TGC TGGCA                CACCCTGCGACAGCC  51 457
        rluC 3535481 .. 3535498 - -12.7  -4.72272   CTCTGCCATGAAAAA             CGGGAGC CAAG GCTCCCG              TTTTTCATGGTTGTC 100 39
        yceD NONE
        rpmF 3533151 .. 3533171 -  -3.3  -4.03234   GTTTGCGTAGACAAA            GGCAATC CTTAAGC GATTACC            TTTTTACCGCGGTAG  58 13
        plsX NONE
 JC965_17015 3531178 .. 3531188 -  -2.4  -2.74741   ATCAGAGGCGAACCA                 GCGC AGA GCCC                 CAGGCAAAACCGCCG  39 1
        fabD NONE
        fabG 3529279 .. 3529292 -  -2.3  -4.56775   ATTTTCCTTTAAAAA               TACGC TATT GCGTC                TGGTTGGGGTAGTGT  65 147
        acpP 3528983 .. 3529004 - -15.9  -4.78848   GGGGTAAACATAAAA           GAAGCGGCC CTTG GGCCGCTTC            TTTCAGAACAGGAAC 100 41
        fabF 3527652 .. 3527675 - -16.8  -5.24129   CCCTCCGATAAAAAA          GGCCCGATAC TACC GTATCGGGCC           TTATCATTCGCCCAG 100 47
        pabC NONE
        mltG NONE
 JC965_16980 NONE
        holB 3524266 .. 3524281 -  -3.2  -3.29461   CAACCTTGTTTATAA              CCAGCT ATTG AGCCAG               TTCATCAAATGGATG  46 4
 JC965_16970 3523442 .. 3523460 - -17.4   -4.3467   ATTGTCATAGTAAAA             CGCCCCGC TAT GCGGGGCG             TTGTCTGTTATCGCT 100 33
 JC965_16965 3522108 .. 3522118 -  -2.6    -2.705   ATCAACAGGATATCA                 TTTA ACA TAAA                 AAAGTCAGTGGCGCG  38 46
 JC965_16960 3521404 .. 3521432 -  -2.9  -3.72324   GAGTCGCATCAAGAA        TGCCCTGCCCCGG GAG CTGGTACGGGACA        ACAACCTGTTCAATG  53 284
 JC965_16930 3515381 .. 3515399 -   -16   -5.4505   CGGGGCAATAAAAAA             GCGCGACC CTG GGTCGCGC             TTTTTGTTTGGCCAT 100 59
 JC965_16900 3507339 .. 3507395 -  -3.4  -5.00616   TGTTCGCTCAAAAAA GCGGCGAGGTC-GGATCAGCCGTGGCG ACCC CGATGCGGGCGATCCCGGCGTCGCCTC CTTTGTTCGCTCTGG  74 190
        corA 3506146 .. 3506166 - -14.7  -3.33815   ACGGCCGGGAATTAA            TCGGGGGGC CAT GCCCCCCAA            TCCGCAGTCTTTAGT  83 56
 JC965_16890 3505410 .. 3505454 -  -8.5  -3.11072   GCGAGGCAACATACA CACCGG-CCAGAGTGCCACC GAGGTG AGCGGCGCCCCGGGCCAGTG GCTGACGGTGGGGGA  57 162
 JC965_16880 NONE
 JC965_16875 3501309 .. 3501332 - -19.6  -4.84529   GCAGAAACGCAAAAA          GGGAGCCCCG CGAC CGGGGCTCCC           GCAGACAGGATGGAT 100 40
 JC965_16870 NONE
 JC965_16865 NONE
 JC965_16860 3498274 .. 3498315 - -24.7  -2.85621   AACGCCAACGCAAAG CCCAGAGAAAGAAACCGCC ATCA GGCGGTTTCTTTCTCTGGC  ACAGGGTCTTGCTCA 100 38
 JC965_16840 NONE
        mgtE 3494586 .. 3494602 - -13.7  -4.56597   CCCTCTGTGCAAAAA              GGCAGCC GAT GGCTGCC              TTTTTTGTCTCTTGT  95 47
 JC965_16815 3489296 .. 3489319 -  -9.6  -3.96618   GCGAAGGGGAAAGAA          TGACGCCG-AC AGG GCGCGGCGTCA          GAGAAGGGATCAGTG  77 35
 JC965_16810 3487569 .. 3487597 -  -6.8  -3.89501   CAAGATTGTCATAAA       GCTGACCTCAAAC TGGC GATTGA-GTCAGC        TTATTCAATTTCCAT  66 99
 JC965_16805 NONE
 JC965_16800 3485090 .. 3485142 -    -7   -3.4072   CAGGGCCCATGATAA TCGAGCCGGACCGGCAAGGCCATG CGCCTGT CA-GGCCTAGGCGGGC-AGCTCGA TGCCGGCGTCACGCA  58 9
 JC965_16795 3484166 .. 3484189 - -16.8  -3.71124   AGCAGTAAGACACAA          CAAGGGAGGC TTAG GCCTCCCTTG           TCATTTCCATCGACC 100 93
         upp 3481572 .. 3481596 - -21.5  -2.71125   AGGGGGGAGAAACAG          CGGAGCCGGCA GGG TGCCGGCTCCG          TTTGCGCGCCTTGGG 100 60
 JC965_16775 3480421 .. 3480442 - -14.4  -3.64912   GAGGCAGATAGAGAA           CCGCCCGG ACCATG CCGGGCGG            TCAGGATCCTTCCCC  86 45
         hda 3479332 .. 3479358 - -10.8  -5.32882   TATCAGGACAAAAAA         TCGAGGGAGGCA TGA TGCCTCCCTCTT         TCTATTGCAAGCCCC 100 325
 JC965_16725 3467901 .. 3467915 -  -8.5   -5.0538   CCTGATTGCAAAAAA               CCGCC TTCAC GGCGG               TTTTTTCATCTCCAT  90 150
 JC965_16715 3466270 .. 3466289 - -10.6  -2.61032   ATAAGAAGAAGAGAG            CGGGGGCG AGGG CGCCCCGG             GATGGAGACAAGATG  64 88
 JC965_16710 NONE
 JC965_16705 3461210 .. 3461228 -   -16  -5.08601   GCACGCCAACAAAAA             GGCCCCTG TGA CAGGGGCC             TTTTTATTCATGGAG 100 60
 JC965_16675 NONE
 JC965_16670 NONE
 JC965_16665 3452998 .. 3453015 - -12.7  -5.88471   CAGCATGAAAAAAAA             GCCACCC TCCC GGGTGGC              TTTTTTATGGGCAAA 100 50
         rrf 3451850 .. 3451869 -   -15   -5.4833   TCAGGCAATAAAAAA            CCCCGCTC AGAT GAGCGGGG             TTTCTTGTATTGGGT 100 41
 JC965_16650 3450904 .. 3450929 - -17.7  -3.27022   TGCAGTGCAGACGAA         GGCGTATCCCA GCGA TGGGATACGCC          TTTTTCTATGCCCGG  91 52
 JC965_16635 3447833 .. 3447843 -  -2.4  -3.54543   ATTCACCTCGGCAAA                 CGGG CGA CCCT                 TGACGGTCGAAACGG  48 71
 JC965_16630 NONE
 JC965_16625 NONE
 JC965_16620 3444447 .. 3444468 - -15.9  -3.09492   CTGTGAATGGCAACA           CGGTCAGCC CAGT GGCTGACCG            TGTTGTTGCAAGGCG  85 42
 JC965_16600 3440771 .. 3440792 - -17.3  -3.90358   ACAGCAGATACCAAA           CAGGGCGCC CATG GGCGCCCTG            TTTGCATGTGTTCAC 100 50
        cysQ 3436836 .. 3436854 -   -16  -5.18726   GGCTGACAAGAAAAA             GGCCGGAC ACT GTCCGGCC             TTTTCGTATCCGATG 100 46
 JC965_16560 3433514 .. 3433525 -  -5.8  -3.02947   TAGCCATCAGATATA                GCCA TAAA TGGC                 CATGAAGTGGCACAG  51 5
 JC965_16555 3431683 .. 3431714 - -16.7   -4.4017   TCAATTGTGACAAAA      CGAAGACGGGAGCC TCATC GGCTCCCGTCT-CG      TGAGGTGTCAGACAC 100 33
 JC965_16550 3428622 .. 3428639 - -11.3  -4.87626   TGCGAACATCAAAAA             GGAGAGG CTTG CCTCTCC              TTTTTTTAGGTTCTT 100 318
 JC965_16515 3420937 .. 3420947 -  -8.2  -2.59564   TTTTTATGTCAGAAC                 CCCG AAC CGGG                 CTGTTGCAGGAAGGC  56 8
 JC965_16460 3408511 .. 3408533 - -17.8   -4.1891   GGCTTGCAATAGAAA           GAGGGAGGCA TCA TGCCTCCCTC           GATTTTTTGTCCTGA 100 123
 JC965_16450 3405869 .. 3405888 -   -15  -4.72272   GTCTTGCAGGAAAAA            CGGCCACC CGGA GGTGGCCG             TTTGGCGTGATGCTA 100 176
 JC965_16440 3405589 .. 3405610 - -14.5  -5.03713   AAGAACCAAAGAAAA           GGCCTTGTC GTCT GACAAGGCC            TTTCTCGGGGAATTT 100 40
 JC965_16425 3404701 .. 3404714 -  -2.3  -3.27786   CCTAAAACGGAGTAA               TGACC GCGA GGGCA                GACGATTTATTATCA  44 116
 JC965_16420 3403681 .. 3403692 -  -5.8  -3.37732   ATACCAAGCTGACAA                GGTG CTAT CACC                 AATACATATACAACA  54 102
 JC965_16415 3402962 .. 3402975 -  -2.3  -4.75289   CACTATAAGAGAAAA               TGTGG TCAT CCACG                GAGAACCCATAAATT  69 222
 JC965_16410 3401991 .. 3402007 -  -4.3  -2.78816   TGAGCCCCCATTACA              CCCCTTG TCC CATGGGA              CAGAGTCAAGCCACC  44 31
 JC965_16405 3401302 .. 3401319 - -14.1  -4.46212   GCCTCGACGACAAAA             GCCCCGC AACT GCGGGGC              TTTTTAATGGGCAAA 100 59
 JC965_16360 3390211 .. 3390230 - -12.1  -5.37043   AGCGGACATAAAAAA            GCGCCGG ACCAGG CCGGCGC             TCTTCGCTTATTCCC 100 59
        mdtH 3387858 .. 3387883 - -20.5  -5.10029   ATGAAGGTGAAAAAA         GGGCGCCCTTC AAGA GAAGGGCGCCC          GGGGTAGACGGGATG 100 53
 JC965_16335 NONE
 JC965_16330 3379055 .. 3379080 - -20.5  -2.65264   CCATCAGGCATATGA         CAACGGCCCGC AGAA GCGGGCCGTTG          TCATGGGGGTCAGGG 100 45
         alr 3377134 .. 3377153 -  -9.2  -5.52384   GGCGCAGTAAAAAAA            GGGGCTCC ATAG GGAGCCCT             TTTTCATGTCAGCAA 100 46
        adhE 3365687 .. 3365709 - -17.8   -4.1891   GGCTTGCAATAGAAA           GAGGGAGGCA TCA TGCCTCCCTC           GATTTTTTGTCCTGA 100 124
 JC965_16275 3364219 .. 3364243 - -17.3  -2.71011   AGGTTTGTCCAATGA          GTTATCCCCAG CTT CTGGGGATAAC          TCAGAAGGCGAAATA  86 26
 JC965_16270 NONE
        yehT NONE
 JC965_16260 3359880 .. 3359911 - -14.4   -4.9218   GAGTGACCACAAAAA      GCAGAGGCCCGGCA GCAA TGCCGGGCCTCTTG       TCATGAAGAGAAGCT 100 47
 JC965_16225 3350737 .. 3350756 -   -15  -5.08011   AAAACGGGCAAAAAA            GAGGCGCC TTGC GGCGCCTC             CGATGGAGATGAGCG 100 46
        fadB NONE
        fadA 3347032 .. 3347053 - -15.1  -5.77677   GAAAAGAATAAAAAA           GGCCGACCC AAAC GGGCCGGCC            AACACGCAGATTCCG 100 212
 JC965_16210 NONE
 JC965_16205 3344614 .. 3344629 -  -3.2  -2.69799   CCACTTCATACATTA              CTGCCT TGGT AGGGAG               AGGGTGGCCTGCAGG  40 7
 JC965_16200 3343330 .. 3343346 - -13.7  -3.64703   CTCTCGGCACTCAAA              GGCGGAC GAT GTCCGCC              TTTGTCATTTCTGCT  84 30
        tusA NONE
 JC965_16185 NONE
 JC965_16180 3342109 .. 3342124 -  -4.6  -2.78384   CCCGTTTTGATTAGA              CAGCGG CAGT CAGCTG               TACTTCCACCCTGTA  44 5
 JC965_16175 NONE
 JC965_16170 3341756 .. 3341779 - -19.6   -4.7373   CGATGCCATGAAAAA          GGCCCCGCCA GCGA TGGCGGGGCC           TTTCTATTGGCGCCG 100 114
 JC965_16155 3339647 .. 3339670 - -16.8  -3.25088   GGGGAAATGCACGAA          GAAGGGAGGC TCAG GCCTCCCTTC           TTTTTTTGCTCTGAA  90 41
        glyQ NONE
        glyS 3335816 .. 3335834 - -13.1  -4.82901   TTCGCTCCATAAAAA             CGGCGCC TCAAT GGCGCCG             TTTTTAATATCATTT 100 53
 JC965_16120 3331898 .. 3331921 - -11.6  -3.97368   CGGCTAAGCGACAAA          CGAGGGCGGC CCAT GCCGCCCCCT           ATTCTGGGGACTTGG  83 24
 JC965_16110 NONE
 JC965_16105 NONE
        ruvC 3329294 .. 3329309 -  -5.4  -4.62872   ATGAAGGCCGAAAAA              CGTGAC CCGC GTCACA               AGTTATTGATTAACT  73 211
        aqpZ 3328439 .. 3328454 - -10.4  -5.28176   TTCAGGCATAAAAAA              CACGCC CGAG GGCGTG               TCGATACCACACGTT 100 54
 JC965_16085 3326725 .. 3326742 -  -6.9  -3.94409   CAGAGCATGGAGAAA             CGGCTGG AGAC CCAGCCT              GTCTACAAGCTGGAT  65 138
         cls 3324693 .. 3324711 -  -6.7  -3.14051   GGATGGGCATCAACA             CAAGCCA GACAA CGGCTTG             GGGTCCACGCTCTGG  54 44
 JC965_16070 3323319 .. 3323334 - -10.4  -5.26316   CGACCCCAGAAAAAA              GGCTCC CGAA GGAGCC               TTTTTTCATTGCGGG 100 46
        ribB NONE
 JC965_16055 3320837 .. 3320856 - -12.2  -6.11644   TCAGGCAAAAAAAAA            TGGCGCAT TAAA ATGCGCCA             TTTTTTCGCATGGAT 100 40
 JC965_16040 3318330 .. 3318348 -   -16  -5.61596   AGGGCCATAAAAAAA             CCGGACCC TGA GGGTCCGG             TTCAAGTGAGGTTGG 100 80
        rlmF 3317262 .. 3317292 - -11.9  -3.92746   CTGATCTGAAAAAGA      GACAGGGCCC-GTG TCGC CACTGAGCCCCGTC       CTCGATCATCTCCCC  85 31
 JC965_16030 3316284 .. 3316316 - -10.6  -3.87869   TTAACCCGCCAGAAA     CG-GCACAGGCCCAC CGAA GTGGGCCTGTGTTCA      TGGACGCAAGACGAG  79 45
 JC965_16015 3313887 .. 3313903 - -10.8  -4.18303   AGTAGAAATGACAAA              CCCGCG ACGGG CGCGGG              CTTGAGGGGAATAAA  81 41
 JC965_16005 NONE
 JC965_16000 3309194 .. 3309208 -  -2.8   -4.7416   CTAAAAGCCTAAAAA               TGAAAC CGG GTTACA               TTCTTTAACTAAAAA  70 463
 JC965_15990 3308788 .. 3308805 - -11.3  -5.61596   AGCCCCATAAAAAAA             CCGACAC CAGG GTGTCGG              TTTTTTTATATCGGG 100 101
 JC965_15980 3307377 .. 3307393 -  -2.1  -2.77899   CGGGTGTAGCAACCA              GGCGGCA TTA CACCGCT              GAATCTTCAGTTATT  39 32
 JC965_15975 3305792 .. 3305824 -  -4.8  -3.12351   TGCCGCCAGACGTAA      TCGCCGGTTCATGT ACAGG ACCTTAAGCGGCGA      GTCCATTTAAAACGC  47 15
 JC965_15970 NONE
 JC965_15965 3303645 .. 3303690 -  -5.3   -2.5806   AAAGTCTTTCATAAG GTCGCATCTGCAGGCCACCGCC GCT GGCGATGGCCTTAAAGT-CGTC AGGCTGGCAGCTCGA  46 24
 JC965_15960 NONE
 JC965_15955 NONE
 JC965_15950 NONE
 JC965_15945 3300811 .. 3300846 -    -9  -2.79183   TGTATCGCCACTACA    TGCCCGACCGCGCTCCA ATC TGGA-CGCAGTTGGGAA    TCGAAGCGCTGGGGC  57 118
 JC965_15900 3293832 .. 3293843 -  -5.8  -3.30124   CTCCATGCCCCAGAA                GCAG CCGC CTGC                 GAGAATTGCTCGCTC  54 112
        msrA NONE
 JC965_15890 3292293 .. 3292303 -  -2.4  -4.66833   TGCGAACGCGAAAAA                 CCGC CTG GCTG                 GTCACTCAAGGCAGG  65 31
 JC965_15875 3289469 .. 3289488 -    -5  -3.41051   TCACGGCCATGATAA            GGGCAA CAGAGGAC TTGCCC             TCCTGACATGAGCAT  54 41
 JC965_15860 3286745 .. 3286766 -  -5.9  -2.88544   GTTCATCGCGACAGA           CCGTGGCTTC GCC AAAGCCA-GG           CGAACGTTGACGCCG  48 52
 JC965_15770 NONE
 JC965_15765 NONE
 JC965_15760 NONE
 JC965_15755 NONE
 JC965_15750 NONE
 JC965_15745 3262817 .. 3262833 -  -2.1  -3.53012   CGCCGCTTGCCCAAA              CCGCCCA GTC TGTCCGG              CATGCCATGACGGGC  46 137
 JC965_15740 3259335 .. 3259345 -  -8.2  -2.68823   TGTTCCCTACACAAG                 GGCG GGG CGCC                 TGAGAAACCCGCAGG  56 430
 JC965_15695 3250431 .. 3250469 - -10.8  -3.44848   CGCCTGCATCAAAGA   TGCCGGCCCGGGGGTCAG CGG CTGGCCAGCAGGCCCGCA   TGCTCCTCGGGGGTG  72 1
 JC965_15690 NONE
 JC965_15685 NONE
        scpB NONE
        rluB 3247116 .. 3247137 - -17.3  -5.86976   GCAGAAAACAAAAAA           GCCCGCACC TTGG GGTGCGGGC            TTGTGGCGTGTCCGG 100 64
 JC965_15670 3246512 .. 3246532 -  -3.9  -4.56597   TTCCCCTTCCAAAAA            GGGAAGTGT ATG ACGCTTTCC            AGCCCGTACAGAGGG  69 84
        tesB 3245502 .. 3245520 -   -16  -5.72616   AGGCACATAAAAAAA             CGGGAGCC ATC GGCTCCCG             TTTTTCGTTGGCGCA 100 51
 JC965_15645 3241484 .. 3241498 -  -2.1  -3.69327   TATCTATGAAAAAAC              GT-GCC ATGA GGCGAC               TACTCCATCCTACTG  48 35
 JC965_15640 NONE
 JC965_15635 3236884 .. 3236909 - -15.5  -5.76633   TGACAGATAAAAAAA         CGGGGCGAATCC TGT GG-TTCGCCCCG         TTTTTTACGTCAACC 100 49
 JC965_15630 3235384 .. 3235418 - -25.2  -3.02471   CCGGCACCAGACAGA     CGAAGGGTTGGCCTCA GTG CGAGGCCAACCCTTCG     TGCTTTTTGTCCCGG 100 218
        tnpA 3233197 .. 3233207 -  -2.4  -3.71917   ATCTTAAATGCGAAA                 GGGG ACT CCCT                 CCGACGTAGGTGGGA  51 60
 JC965_15595 3230205 .. 3230219 -  -4.2  -3.85698   CCGGGGCGGGAGAAA               CGATGG GGG CCATCT               TACCCCAGTTGTGCC  57 81
        xseA 3228672 .. 3228683 -  -7.2  -3.17901   ATACGTGCAACGCAA                CCCG CTGG CGGG                 GGAGCAGGGGGGCGC  57 147
        pspF 3216218 .. 3216240 -  -6.9  -4.03413   ATGTTTTCAGACAAA          GTTGCCCGCC AGGG GGCGGGCG-C           GTTGCGGGGGGCGAC  68 109
        sapA NONE
 JC965_15515 3213513 .. 3213539 -  -4.3  -3.17075   CTGGTCGCAAGGGAA        TGGGCACGCCTG TGCG CCGGTG-GCCCA         TGGGCCACCGTGGCT  47 57
 JC965_15510 NONE
 JC965_15505 NONE
 JC965_15500 3210630 .. 3210651 -  -7.9  -3.66178   TGGCGCAAGGGGAAA           CGCGCCGCGG GAT CAGCGGCG-G           TATTCGTTGTTGTAG  63 16
 JC965_15475 3207711 .. 3207723 -  -5.5  -2.57132   TTGCCCGGCGATAAC                CACGA TAA TCGCG                TCAATGCCTATGCTG  46 253
        rmuC 3205763 .. 3205787 - -12.2    -3.551   TTGCAACCCAGACAA          TCAAGGCGCC TGTGT AGCGCCTTGA          TTGTTTTACGCGATC  79 56
 JC965_15465 3204907 .. 3204917 -  -4.6  -2.70022   GCCATTTCAGACAAT                 CCGC AGT ACGG                 GAAGACCAACTGGCA  43 244
 JC965_15460 NONE
 JC965_15455 3201579 .. 3201607 - -21.9  -3.54741   GACCATCTCCCCAAA        CAATCAAGGCGCC ACT GGCGCCTTGATTG        CTTTCACGCTGCTGG 100 90
        folD 3198675 .. 3198693 - -14.6   -5.8187   GACGCAATAAAAAAA             GGGAAGGC AAT GCCTTCCC             TTTCTCTTTTCTGCC 100 52
 JC965_15410 3194311 .. 3194350 - -12.9  -3.83502   GAGGGCCACATTAAA CAGGGGTGTCGCGCCGACC GCAA GGCCGGCGC-AC-CGCCTG  GCTATTCATCCCGCC  85 45
 JC965_15405 3192853 .. 3192870 -  -4.1  -4.63527   CCAGCACTTCAAAAA             CCGG-GAC ATC GTCGCCGA             GTGCCGCGACTTTCT  72 509
 JC965_15385 3187676 .. 3187700 -  -9.9  -3.54424   GCCCATTCGTTGAAA          GGGCCCCGG GCGCGTG CCGGGGCGC          AAGGTCAGAATGCGT  72 30
 JC965_15380 3186796 .. 3186814 - -11.6  -5.24129   GCCGGGCACAAAAAA             GCCGCCAG GAT CAGGCGGC             TTTCATCACGGGTTG 100 65
        metE 3183345 .. 3183368 - -16.8  -5.08824   CGGCCATGCAAAAAA          GAGGGAAGGC TGTC GCCTTCCCTC           TCTCGTCTTGGTGAC 100 76
         rph 3180114 .. 3180129 -  -7.5  -5.60993   GGGGGTATAAAAAAA              CGCGG TCAATG CCGCG               TTTGCAGGATCTGTT  95 301
        pyrE 3179342 .. 3179378 - -20.3  -5.21709   TTGCAGATGAAAAAA    CGGCGCCCGTTTGCT GCCAGAG AACAAACGGGCGCCG    CCTTCAACTATTGCG 100 57
        cadA 3176808 .. 3176825 -  -4.1  -3.15544   GCTGATGTTCATGAA             TGACTCC TTTG GGATTCA              GATGCACGCAGGCTG  46 1
        cueR 3176338 .. 3176350 -  -4.8  -3.15663   ATCGACCGCTATTAA                GCTG CCACT CAGC                GCGTCCTCTCCCGCA  47 90
 JC965_15330 3175115 .. 3175129 -  -2.1  -3.11732   GTGAAACTCAGGCAA               CCTTA CCCAT CAAGG               CTACTTCGATACGAT  42 3
 JC965_15325 3174736 .. 3174761 -  -9.7   -5.4833   TCAGGCAACAAAAAA         GGCCCATAGCC AGTT GACTATGCGCC          TTTTAATAGATTCTC 100 77
        ccoG 3173099 .. 3173116 - -14.1  -4.57755   ATCCACCATAGAAAA             GGGGCGC TGTT GCGCCCC              ATTCTATCACCACTG 100 76
 JC965_15315 3171994 .. 3172013 - -11.4  -2.98088   TGGCAAAGGCAGACA            GGCGGGAC CGCC ATCCCGCC             TCCCACGGGCACCTT  70 115
 JC965_15310 3171237 .. 3171260 - -19.6  -5.38054   CCTGATAAACAAAAA          GCCCGCCGGT TTGC ACCGGCGGGC           TTTTTTTCACGAGGT 100 50
 JC965_15280 3165041 .. 3165075 -   -12  -3.17723   GCAGGGCGAAGCGAA     TGCCCTGCTGCTGGCA GAG CGCCAGCGCCAGGGCG     GCGCCGCGATCGAAC  74 351
 JC965_15255 NONE
 JC965_15250 NONE
 JC965_15245 3158581 .. 3158592 -  -4.4  -2.59527   CCAAGAGGACAACAG                CTCA TCCT TGAG                 AGGGGATATCTGTAC  43 55
 JC965_15240 3157250 .. 3157279 -  -2.1  -4.36914   CTTCTCTTCAGAAAA       GTACCTG-GCGCAT GCC ATGCATACAGGTCC       ATATTCACTCATTAG  63 277
 JC965_15235 3155996 .. 3156021 -  -3.9  -2.62983   TCCAGGGTGACATCA         TCCCAG-CGCTC ACA GAGCGGCCAGGT         AGTGATATCCAACTG  42 306
        istB 3153412 .. 3153440 -  -4.6  -3.21622   AGATAGAGGTAGTAA       TACTGGCCGCGCA CGAG TG-ACGGCAAGTA        GGTGATATCCCAGGA  49 420
 JC965_15210 3151706 .. 3151718 -  -3.5  -2.97021   CTGTTAAAGATGACA                TTATT TAT AATAA                CTAATCACACAAAAA  44 70
 JC965_15205 3150649 .. 3150659 -  -2.6  -4.08767   CGCAGTCTGTTAAAA                 TAAT TAA ATTA                 TATCTCAGCTGATTT  56 124
 JC965_15180 3145433 .. 3145457 -  -8.4  -5.36441   TCGCCACACAAAAAA          TCGGGCGGGC ACCAG GCCCGCCCTC          AGGCGTTACAGGGAG  95 429
 JC965_15175 3144900 .. 3144918 -  -3.9  -4.05446   CGGCTGAAGCATAAA            GAAG-GGT AGGT ACCTCTTC             TCACGAAGAGGTTCA  60 73
 JC965_15160 NONE
        ubiA 3142651 .. 3142667 - -13.7  -5.12068   GACACCCAACAAAAA              GGCCGCA TCA TGCGGCC              TTTTTTCATCAAGGA 100 51
        lexA 3139332 .. 3139361 - -20.9   -4.3467   ATCGGCAGATGAAAA       TGAAGAGGCCTCC CGCA GGAGGCCTCTTCA        TCGCATCGGATGCTT 100 39
 JC965_15140 3138688 .. 3138715 - -21.4  -4.08216   GCATCGGCGCCAAAA        CAAGAGCCCCGC TCTG GCGGGGCTCTTG         TCTGTACAGGAAGAG 100 44
 JC965_15135 3137899 .. 3137909 -  -3.2  -2.71731   GCCAGGCGGGAATCA                 GCAT GGT ACGC                 GCCGGGATCACTCGC  40 33
 JC965_15130 3136109 .. 3136119 -  -8.2  -3.01712   GCCTCTGCGCCAATA                 CCGG CTA CCGG                 TTGCACCTGATAGAG  57 438
 JC965_15110 NONE
        cysE NONE
 JC965_15100 3130701 .. 3130730 -  -2.7  -4.06419   GCTCGGCACAAACAA       GCCAGCACGTTGCA AAA TGCGCCCTGC-GGC       CCGGTATTGCTTAAA  58 127
        zapB 3130347 .. 3130377 - -21.2  -4.34402   CCCGGCAGACCAAAA       CAAGCGGGCCGCTC AAG GAGCGGCCCGCTTT       CATTCCGGTCAATCT 100 49
        polA 3126455 .. 3126479 - -20.1  -2.74122   CGCCACCACAAACAG          GAAGCCCGGCA TAA TGCCGGGCTTC          GCTTCTTATTATAGC 100 72
 JC965_15050 3119009 .. 3119031 - -10.5  -3.83205   AGCCTGGACATCAAA           GAGGGCGCC CATCT GGCGTCCTC           TTTGTCTATGGGAGT  77 40
 JC965_15035 3115691 .. 3115727 - -24.1  -2.71364   CCACCGCTCGAAGCA    GCAATAAAAAACCTCGC CTT GCGAGGTTTTTTATTGC    TGTGGAAAGGGGCCT 100 51
        rrtA 3112156 .. 3112187 -   -21  -2.72379   GTAATGGGCGAATGA      GC-GCAGGCCGGATC CCA GATCCGGCCTGCTGC      ATTTTGGCCGTGGGC 100 61
        ribA 3105966 .. 3105984 - -14.6  -5.15167   TATCACCAATAAAAA             CGCCTCCA ATC TGGAGGCG             TATGCTGACAAGGTG 100 50
 JC965_14930 3096412 .. 3096432 -  -7.5  -4.56597   CTCGCCGTTGAAAAA            GACCAGGTC CCT GTCCTGATC            CGCCTGGAGGGCATG  79 514
 JC965_14915 3093869 .. 3093891 - -19.2  -4.41616   AGTCTGCGAAATAAA           GAGGGCGTGC CTG GCACGCCCTC           TTTTTTCTTGCCCCC 100 44
 JC965_14830 3072217 .. 3072235 - -14.6  -2.52516   GCCCCCATCAGGAAG             CCGAGCAG GGT CTGCTCGG             TGGCCGCCTCCCGCC  78 452
 JC965_14820 3071031 .. 3071048 - -12.7  -4.86033   AAATCCTGACAAAAA             GAGCGCC GAAA GGCGCTC              TTTTCTTGTCTGGAC 100 62
        tnpA 3066541 .. 3066561 - -18.3  -3.07291   AAGGAGGGTAGTGAA            GGCGCAGGC CAG GCCTGCGCC            CAGCAATGCCACTTG  90 132
        moeA NONE
        moeB 3063307 .. 3063326 - -13.6  -5.72616   AGGTAGATAAAAAAA            GCCGAACC CCGG GGTTCGGC             TTTTTTGTGGGCGCT 100 43
        narQ NONE
        narL 3047811 .. 3047853 -  -8.3  -2.80579   TGGGGAAAAGAAGAG GGGGCCAGCAAGGAGGCAC GGATG GTGACCCCTTGCTGGCAGG AGGCCGGGACCTCAG  57 37
 JC965_14685 3047262 .. 3047278 -  -6.5  -2.87463   AATGCCTGTTACAGA              CCCATTC AGC GATTGGG              GGCAAAGGCCAGGGG  51 100
 JC965_14680 3046171 .. 3046192 - -13.1  -5.75342   TTTGGGTAAAAAAAA           TGGTCAACC TGGT GGTTGACCA            ATTCTTCAGCAAATA 100 250
        yvcK 3041827 .. 3041838 -  -7.2  -3.36878   TTCACTGATCCAGAA                GGGC ATCA GCCC                 GCCATGTCGCGCTCG  59 19
        fadE 3036950 .. 3036968 - -11.7  -4.72272   CCCTTTCATGAAAAA             CGCCTCC ACAAG GGAGGCG             TTCTGGCATCAGAGG 100 43
        mlaF 3026721 .. 3026736 -    -4   -2.9155   CTTGTCAACATCACA              GATCCTG TAG CAGG-TC              GCCTGCCGGAAAATG  44 5
        mlaE NONE
        mlaD NONE
        mlaC 3024787 .. 3024817 -  -6.1  -2.52464   GGGGCCTGCAAGTCA       CCGCTCAGGATCA TGACT TGATCACCAGCGG       CTTGGCGTTGTGTTC  48 5
 JC965_14560 NONE
        ibaG NONE
        murA 3022940 .. 3022964 - -22.9   -4.7497   CGGAGTCATGAAAAA          GGCCCCCTCGC TTT GCGAGGGGGCC          TTTTTATCGTCGGCT 100 56
 JC965_14535 3019891 .. 3019916 - -20.5   -5.4833   TGACGCAATAAAAAA         CGGCGCGCAGA GTGC TCTGCGCGCCG          TGTCGTCAGGTGGTT 100 47
 JC965_14520 3015829 .. 3015852 - -16.8  -3.78934   GGTGCTTCATAACAA          TCTGGCCAGC GAAC GCTGGCCAGA           GGGGTCGGTAAACAG 100 47
 JC965_14515 NONE
 JC965_14510 3013572 .. 3013588 -  -2.1  -3.29471   TCCGCATCATAGGAA              GCCGGCA TCT TGGCTGC              AAGAAGGCACATTTT  44 411
 JC965_14500 3013229 .. 3013243 -  -9.2  -2.87468   GGGGATCACACCAGA               CCGCGC GTG ACGCGG               CTGAGGGGCTCGTTG  60 1
 JC965_14485 3011160 .. 3011192 - -20.7  -3.08679   GGGGCGCAGTGAACA      GGAAAGAGGGCGACC CGG GGTCGCCCTCTTTCA      TTTGGCCGGGCCAGA 100 41
 JC965_14470 NONE
 JC965_14465 NONE
 JC965_14460 3007449 .. 3007474 -  -6.2  -5.06414   TGTTGTTAATAAAAA         GACGGTTAAA TCACGT TATAACCGTC          GGCAGAATACTGGCG  86 10
 JC965_14455 3005670 .. 3005687 -  -6.9  -3.53012   GCCTTGCTGGTCAAA             CGTCGGC TGGC GCTGACG              CTGATTGGCAGCGCG  58 244
 JC965_14420 NONE
 JC965_14415 NONE
 JC965_14410 2998232 .. 2998247 - -10.4  -4.73864   CCAAGCAACACAAAA              GGGACC CGAG GGTCCC               TTTTTTCATGCCGTG  95 95
 JC965_14375 2989962 .. 2989972 -  -6.8  -3.07307   GAAACCGGGAGGCAA                 TGGC CGA GCCA                 GCGGAGCAAGCCATG  54 460
 JC965_14370 NONE
        mglB 2985427 .. 2985449 - -14.9  -3.63922   ATCTGGTTGAAAAGA           GGGCAAGGG GATCT CCCTTGCCC           TGAGGGGAGGAATTA  90 38
        mglA NONE
        mglC 2982750 .. 2982772 - -17.8   -4.1891   GGCTTGCAATAGAAA           GAGGGAGGCA TCA TGCCTCCCTC           GATTTTTTGTCCTGA 100 115
 JC965_14350 2980401 .. 2980415 -  -3.6  -5.06451   CATGATTTTAAAAAA               GATAAC TTC ATTATC               CTTTCGCGGGAAACC  79 463
        arcA 2977918 .. 2977955 - -14.7  -2.64803   TGATCTCGAAAGTGA   GTCTGTGTGGCGCCAGC CTCC GCCGGCGCCACGCCGTC    GGTTAGATGCCGTCA  78 28
 JC965_14335 2976961 .. 2976972 -  -5.8  -2.62396   CAGTTGTTCAGACCA                GAGC CTTG GCTC                 AGGCATTGACGGTAT  48 24
        argF 2975855 .. 2975874 - -16.4  -4.10657   TCACATGGTTGAAAA            GCCGGGGG TCAC CCCCCGGC             ACCACTGACGACGTC 100 39
 JC965_14325 2974317 .. 2974335 -   -16   -5.4111   AAGAACCATAAAAAA             CGGGAGCC CCA GGCTCCCG             TTGTTGTCCCTATGT 100 51
 JC965_14290 2967111 .. 2967121 -  -4.6   -3.4617   ATGAACACCAACCAA                 GAGG CCA CCCC                 GGGTATCGGGAACGG  52 53
 JC965_14275 2962743 .. 2962789 - -10.9  -3.62644   GCCACAACCAGATAA GCCTGCATCCCCCCA-TCCACC GCTC GGTGGACTGGAACGATGCGGAC GACACCGGCTGGAAG  73 355
        sohB 2959895 .. 2959919 - -21.5   -5.8187   GACGCAATAAAAAAA          GAGAGCCGGGC AAT GCCCGGCTCTC          TTTTTAGTCCTTTGC 100 192
        topA 2955486 .. 2955507 - -12.3    -4.258   CCATCCACCAACAAA           GAAGCCCCT CGCA AGGGGCCTC            TTTCATCATGCCGTG  90 54
 JC965_14245 2954771 .. 2954791 - -15.5  -2.79831   GCAAGCCCCATGACA            GAAGCGCCA CAA TGGCGCTTC            TGCTGTTTTTGACGA  82 484
 JC965_14165 2938549 .. 2938562 -  -9.5  -4.32951   ATTCCAAGTAATAAA               GCCCC GCAA GGGGC                TTTTCTATGACTGCG  83 61
 JC965_14155 2936817 .. 2936850 - -18.4    -4.614   CGGAACCACAGAAAA     TGAAAAAGGGCCTG TCACAG CAGGCCCTTTTTCA      TTGGGGCTGATGACC 100 23
 JC965_14135 2932975 .. 2933009 - -10.7    -3.543   TCAGAAAAGCGAGAA    GCTGGGAGCCC-TGCC GGGC GACACGGACTCCCCGC     ACACCTTCCCCGCCC  74 43
 JC965_14130 2931550 .. 2931570 -   -14   -5.1356   CGCCAGCAACAAAAA            GACCGGCC ACATG GGCCGGTC            CTGGGATGTGCAGTG 100 54
 JC965_14125 2930275 .. 2930293 - -17.4  -4.72272   CTTGCCCAGCAAAAA             GCCCCCGC ATG GCGGGGGC             TTTTTCATGGTTCGG 100 51
 JC965_14115 NONE
 JC965_14110 2926313 .. 2926344 - -17.4  -3.05463   ACCCCGTTGACCCAA      TGACACATCCCGAC CGAG GTCGGGATGTGTCG       AGCCATCAGAGCAGC  89 31
 JC965_14100 2923572 .. 2923590 - -14.6  -5.60993   CCGGCCATAAAAAAA             CCAGCGAC CCG GTCGCTGG             TTTTTTTTGCCTCGC 100 50
        trmB NONE
 JC965_14080 2919723 .. 2919739 - -13.7  -4.87665   GCCCACCGACAAAAA              TCCCGCC GGC GGCGGGA              TTTTCTATCTGCCCG 100 56
        glsB NONE
 JC965_14070 2917395 .. 2917414 - -11.4  -4.90302   TATCAAGAAAAGAAA            GACCGGAC ATCT GTCCGGCC             TGCTCTGGATTATTA 100 42
 JC965_14065 2916999 .. 2917024 - -19.1  -3.08508   GAGGGCTGAAAATGA         CAAGGGCTGCC CGCG GGCAGCCCTTG          TTGCTTGAGGAGAGC  95 42
 JC965_14050 2911247 .. 2911268 - -17.3  -3.72363   GAGCCAAATTCGAAA           GGCCCGCTC AGAT GAGCGGGCC            TTTTTGCATCTGTCA 100 59
 JC965_14035 2909596 .. 2909607 -  -2.2  -2.71144   CACGCCCTGGAACCA                TGCC CGGT GACA                 CAAACGGCAGGCAAC  38 429
 JC965_13995 2900698 .. 2900714 -  -7.9  -3.01712   TTTCGTTCTTCAACA              CGCCCGT TTA ACCGGCG              CACTTTTGATGGTGC  56 35
 JC965_13990 NONE
 JC965_13985 2900456 .. 2900473 -  -9.9  -4.55887   TTCCAAAAACACAAA             GATGACC ATCT GGTCATC              CTCGTCATACAGCAA  87 44
 JC965_13980 2900330 .. 2900345 - -11.8  -5.18355   GCCAAAAAGCAAAAA              CCCCGC CTGA GCGGGG               TTTTCAAATGTGGTC 100 36
 JC965_13975 2899625 .. 2899645 -   -14  -4.65895   TCGCGGATCGAAAAA            GGGTGGCC CATGT GGCCACCC            TTTTTGTTTCTCGCT 100 47
 JC965_13930 2890593 .. 2890631 -  -8.7  -3.55304   ACACTCAATAAGTAA   CATTGGTGCTGGCGCCG AGCAA CCGCGCCAGCATCGCTG   TCATCGCACCGCTCG  68 99
 JC965_13925 2889616 .. 2889649 - -18.3  -4.18197   AGCGCTGACTGAAAA     CCATTGACGCTGATG GGTC CATCGGCGTCAATGG      GTACGCGGACACTGA 100 48
 JC965_13915 2887947 .. 2887962 -  -2.4  -2.62616   CCAGTGGGCACAGCA              GCGCCG CCAA CAGCGG               GAGGCTGCCCTATGT  38 304
 JC965_13900 2885551 .. 2885577 -  -4.3  -3.53091   ACTCTGGTTGGCAAA         GAGGTGCTGAC CGAGT GCCAGCCCATC         CTGAGCGACACCGGC  51 472
 JC965_13885 2882674 .. 2882684 -  -8.2  -3.62275   ATGTATCAGGCGAAA                 CGCC AGG GGCG                 CAACCAGACCGTACT  65 107
        ftnA 2880173 .. 2880193 - -16.9  -4.78848   CCTGCAAATAGAAAA            CGGCCCCTT TAC AAGGGGCCG            TCATTGTACTGACTG 100 62
 JC965_13870 2878694 .. 2878713 -   -15  -5.31877   ACCGACCATAAAAAA            CGCGGCCT GAGC AGGCCGCG             TCTGGTTCCATCACT 100 195
        leuE 2876519 .. 2876534 - -11.8  -3.33525   TTGATTGACAGAACA              GCCGGG GACG CCCGGC               TCTCTCCATCTATTA  77 79
        recR 2872241 .. 2872296 - -21.4  -3.53012   GGTTGGCCTTTCAAA TATCAAGGGGCTTGCGTGCAAACTTG AGAG CAAATTTGCACACAAGCCCCTCGCTT GGCCCACACAGGCAA 100 404
        htpG 2870229 .. 2870249 - -12.6  -5.77853   AACGGCCAAAAAAAA            GCCCACTG TCATG CAGTGGGC            CAATCACAATCACAT 100 40
         adk 2869307 .. 2869323 -  -7.2  -4.25681   ATGGAATGCAAGAAA              GGGCCC GGTAT GGACCC              TTTTCTCACTCTCGT  74 83
        hemH NONE
 JC965_13820 2867795 .. 2867813 -   -16  -5.24129   GGCTGCCACAAAAAA             CCACCCCG TGG CGGGGTGG             TGTTGCGGGATGACA 100 42
 JC965_13815 2866299 .. 2866330 - -19.6  -4.60041   ATCCAGCCCCAAAAA      CAAGAAAGGGTGCC CAGT GGCACCCTTTCTCG       TGGTCGACAGGAAGA 100 45
 JC965_13810 2864459 .. 2864475 -  -3.6  -3.51232   TCTCTTGCAAAGCAA              TGGCAG GCTGT CGGCCA              GGGCTGGCCGAGAAT  50 109
 JC965_13805 2864023 .. 2864044 - -18.7  -5.60993   GCGGCCATAAAAAAA           CCGGCCCCC CGAA GGGGGCCGG            TTCATCACAATCCGG 100 54
 JC965_13800 2863019 .. 2863036 - -10.5  -4.60487   CACCAGTTGCAAAAA             GACCCCG ACAT CGGGGCC              AACCTGGTGTTCGAG  95 420
        glgC 2860328 .. 2860344 - -13.7  -4.24745   GACCACCAATAGAAA              GGGAGCC CAG GGCTCCC              TTTTTTTGTCTGTGT  95 49
 JC965_13775 NONE
 JC965_13770 NONE
 JC965_13765 NONE
        amoF NONE
        dhbA NONE
        amoG NONE
        amoH 2841781 .. 2841803 - -17.8  -3.63515   GTTTACGGCCAACAA           GAAGCCCGCA TGA TGCGGGCTTC           TTTTTTATCCATGGC 100 54
 JC965_13735 2839861 .. 2839872 -  -7.2  -4.56597   GGTGCTGGGCAAAAA                GCGG GTCC CCGC                 CAACATCAAGGTGGA  83 344
        zntB NONE
 JC965_13710 2836808 .. 2836823 - -10.4  -4.67755   ACAGCCATCGAAAAA              GGCTCC CGAG GGAGCC               TTTTCTCATTCCGGC  93 31
 JC965_13665 2825386 .. 2825397 -  -4.4  -2.60212   GCAGGATCTGACAAT                TGTG GGGT CACA                 GCCCCGCCCCGAGAA  43 127
 JC965_13660 2824611 .. 2824626 -  -5.4  -4.83169   AGCCCGGCACAAAAA              TAGCCT CATG AGGCCA               ATATGGCACCCAATG  76 15
 JC965_13655 2822464 .. 2822482 -   -16  -4.72272   GCGCCCCATGAAAAA             GCCCTCGC ACT GCGAGGGC             TTTTTTGTTGGCTGC 100 52
        hldE 2819705 .. 2819720 - -11.8  -5.14965   AGCCCCATCAAAAAA              CCCGGC CTTG GCCGGG               TTTTACGCTTATCCG 100 34
        nudF 2817221 .. 2817241 -  -8.3  -2.70932   CGGCTCCCTCAATCA            GGGTCCA TGAGGGG TGGACCC            ACTGCACAGTGTGCC  56 85
 JC965_13630 NONE
        cpdA NONE
 JC965_13620 NONE
 JC965_13615 2814695 .. 2814709 -  -4.9  -3.17571   AACCGGTTAATCGAA               CAGGG TATCC CCCCG               CCCCTGCGACAGATG  47 2
 JC965_13610 2814092 .. 2814105 -  -4.5  -3.15147   TGGAATGAAGAGAGA               GGCCGG GGT CCG-CC               GGGAGACGGACAGGG  47 165
 JC965_13605 NONE
 JC965_13600 NONE
 JC965_13595 2810930 .. 2810957 -  -6.2  -3.53012   TGGGGCGCTCGCAAA        GGGTGATCCAGAG GGG CTCCGG-CCTCCC        CGCCCGGGATCAGGC  56 35
        parE 2808849 .. 2808891 -  -3.8  -2.59447   GGTGAATCACAAGAC CCCCTCCCAACCTCCCCCTC CAT GAGTGGGAGGAGAGGCTTGG CCCCCTCCCCTTGCG  42 77
        parC 2806348 .. 2806374 - -18.2  -5.26875   TCCCTAATTAAAAAA         GAAAGGAGCGAT TTA ATCGCTCCTTTC         TGTTGATTGGTTACT 100 44
 JC965_13560 2803585 .. 2803609 - -15.7  -4.27467   GCAGAATTTAAGAAA          GCCGTGGTACC TCT GGTGCCACGGC          TTTTTGTTTTCATGG 100 356
 JC965_13520 2796636 .. 2796658 - -17.8  -3.32844   CGCTCGATGTGACAA           GGGGAGCATC CGT GATGCTCCCC           TTGTCGTTTGTGGCG  91 55
 JC965_13480 NONE
 JC965_13475 2784768 .. 2784802 -  -6.2  -3.78934   TTCTTTGTACAAGAA     GGGGGGGCTGGCGCCA TCG TGACGCCAGCGCTTGC     CGATCAGTAGACCAT  61 29
 JC965_13470 2783798 .. 2783842 -  -9.2  -2.87132   GCTCCCGGGCAGACA TGCTGA-TGTGCGGGGCGGCC AATT GGTCGCCCCGCACGCTTATCA GAGTTTGGCGAGCAG  60 23
 JC965_13455 NONE
 JC965_13450 2780053 .. 2780069 - -15.1  -5.67063   CCGATGATAAAAAAA              CCCGCGC ATG GCGCGGG              TTTTTTTATGGCTGG 100 47
 JC965_13435 NONE
 JC965_13430 2777240 .. 2777270 - -12.4  -4.46615   GAGCAGGAAGGAAAA       GGGGGCGGCGAGCC CTT GGCTCGCCGCGACA       TCAGGCCAACAGACG  91 26
 JC965_13425 2776216 .. 2776242 -  -9.5  -2.54574   CAGGCCAAGGAAGAG        GGGCGC-AA-CGG TTA CCGGTTCGCGCCC        TGAGTCTGTTCCCGC  62 10
 JC965_13415 2774747 .. 2774757 -  -2.4  -3.29144   TGAGCCGCCCGATAA                 GCCG TGA CCGC                 GTTACGCTTGGGGGA  44 27
 JC965_13410 NONE
 JC965_13405 2773065 .. 2773085 -   -14  -4.18018   GGCGTGCATGGAAAA            CGGCCTGC GTGAA GCAGGCCG            TTTTTGTTGAACGAG 100 44
         crp 2771208 .. 2771224 - -13.7  -4.16279   GAGAGGATCGGAAAA              GGCTGCC ATG GGCAGCC              TTTTTATCCAACGGC  95 70
 JC965_13385 2770190 .. 2770221 - -13.9  -4.79667   AAAACCTAGTAAAAA      CAATGCCAGTCAG GCTTAA CTGACTGGCATTA       GGCCGAGGGCCCCAT 100 145
 JC965_13375 2769292 .. 2769312 -  -2.5  -4.19238   TGGCCAAGTGCAAAA            GGCATTAAA CTC TCCAAAGCC            CAAGAGTGTGAGAAT  56 131
        rapA 2766413 .. 2766428 -  -8.2  -2.71924   CATCTTGGGTCAAAG              CGGGGG CAAG CCCCCA               TCAGTTATGGGTCAC  56 26
        rluA 2765679 .. 2765700 - -15.9  -5.28176   CTGAGCGATAAAAAA           GCCCCCATC TCTC GATGGGGGC            TTTCTTTTTATTGGG 100 57
 JC965_13335 2759151 .. 2759168 -  -8.5  -2.57211   ATGCTGGCCGACAAG             CTGATTG GCAG CAATCAG              TTCAGGATGCAGATG  53 180
        aspA 2756897 .. 2756919 -   -17   -3.6215   GGAATTGACTTTAAA           TGGGCCGGGA TCA CCCCGGCCCA           TCTGCTCGCTTATAC 100 35
 JC965_13320 2755440 .. 2755455 - -11.8  -5.60993   CCTGGCATAAAAAAA              CGGCCC GTTC GGGCCG               TTTTGCATGGGGTGG 100 49
 JC965_13295 NONE
         fos 2748295 .. 2748317 -    -4  -3.37245   GCAGGCCAACACCAA           GCTCAGGCTG CGT CAGGACGAGC           TGCGCCAGGAGCGGG  48 509
 JC965_13280 NONE
 JC965_13275 2746858 .. 2746882 -  -6.3  -2.63596   TGGTAGGGGACATGA          CTCCAGGGGCC ACA GGCCCCTCAAC          CATGTCCATGGGCAT  48 46
 JC965_13250 2743358 .. 2743383 - -10.5   -3.0806   GCGAAAGTGCGAAGA         GGCTCATCAAC CCGG GTCAATGAGCC          TCAAGATGGCGTTAG  68 37
 JC965_13245 2742277 .. 2742291 -  -8.5  -3.73224   TCAGGCGCCAGGAAA               GGGGC AAGTG GCCCC               TCACCCGTGGCGCAT  69 180
 JC965_13225 NONE
 JC965_13220 2738456 .. 2738472 -  -2.9  -3.09288   TAGGCCGGAACAAAC              TCCAACA ACT TGCTGGT              TTTTTATTTTTTATG  43 29
 JC965_13215 2737880 .. 2737894 -  -2.7  -2.63164   TTACAGGGAACCAAT               GCCGG GCACG CCTGC               GACAGGGAGCAAACT  40 89
 JC965_13210 2736979 .. 2737004 - -13.3  -5.79588   TGAAAACGAAAAAAA         TCCGAACCCTG TTAC CGGGGTTCGGA          TTTTTTTATGGTCAT 100 201
 JC965_13200 2733339 .. 2733351 -  -6.2  -3.52877   AGTAATAGATCAGAA                CGGC CGATC GCCG                TCAAGCACTGAAAAT  56 48
 JC965_13195 2732818 .. 2732828 -  -4.6  -3.09492   CGGCGAAGTTGAACA                 GCCA TTC CGGC                 CAACGTGAACACCCT  47 71
 JC965_13190 2731001 .. 2731028 -  -6.8  -4.88918   CTACGTCAAAGAAAA        GATGCCGAAGGC GACG GCCGACGGCTTC         GTTCGATACCCCGCC  83 204
 JC965_13150 2724541 .. 2724568 -   -12   -2.8474   CGGCATGGAGAAGCA        GACCCACGGCGAG AAG CTCTCCG-GGGTC        TATCGCCACCACCGC  67 479
 JC965_13140 NONE
 JC965_13135 2721209 .. 2721231 -  -4.8  -3.35679   CTGGCCCAGGTAGAA           GCCCCC TGGTTGCTGTC GGGGGC           GGTGAAGGATGCCCT  50 239
 JC965_13125 2720605 .. 2720619 -  -2.1  -3.05384   CTTGCCGGCATCCAA              TGCCGC CGGG GCGG-A               TCCAACGCGCAGTAT  42 62
 JC965_13120 2718828 .. 2718879 -  -3.5  -3.11073   GAGTGTAGCGAAAAT CGCCGCCGGG-ATCACGCCGCCTGC CGAA GCGGG-GGCACGTTGCCCCTCAGCG CTGGCCCTGGTAGGG  46 20
        yidA 2717926 .. 2717942 - -15.1  -3.46602   GGCCGGATAGCAGAA              GGGGCCC GCA GGGCCCC              TTGTCGACTCAGGCG  88 34
 JC965_13110 2716439 .. 2716462 - -11.7  -2.62983   TCCAGGTGGACATGA          CCCTGCCCC TGAAAC GGGGCAAGG           TGGTGAATGGCCGGG  65 380
        cyaY NONE
 JC965_13065 2710208 .. 2710227 -   -15  -4.10953   AGGGATGAAAGCAAA            CGGCCTGC TGAT GCAGGCCG             TTGTCTTACCCGTGA 100 49
        hemC NONE
 JC965_13050 NONE
 JC965_13045 NONE
 JC965_13040 NONE
 JC965_13030 2700572 .. 2700590 - -13.8  -5.15634   CATCGCATGAAAAAA             CGGGGCCA TTT CGGCCCCG             TTTGATTGTGTACTG 100 73
 JC965_13010 NONE
        guaB 2693576 .. 2693614 -  -9.5    -5.626   CACGGGATAAAAAAA   GGGTGGAAAAACGGGGC GTAGA GCCCCGTTTCATCAGCC   CATCCGGTAGTTGGG 100 20
        guaA 2691875 .. 2691891 - -10.8  -5.27023   ATTGGAAAAAGAAAA              GGCGCC TCAAG GGCGCC              TTTTTGACAGTTTTG 100 69
 JC965_12980 2687785 .. 2687799 -  -7.8  -3.65812   CCCTGTGCAAGAGAA               CGCCCA CGA TGGGCA               GGCCTCAGGCCACGA  63 30
 JC965_12975 2686794 .. 2686813 -   -15  -5.10461   CGCAGGCAATAAAAA            GCCGACCC TGTG GGGTCGGC             TGGAAAAACCATAAT 100 258
        sixA NONE
 JC965_12960 2682963 .. 2682988 - -14.8  -3.72027   AGGCGCCATCAACAA         TCATGCCCGC ACAGGG GCGGGCATGA          GGGGGACCAGGGTCA  95 53
 JC965_12955 2681881 .. 2681899 - -11.7  -4.88407   GCACCGAACCAAAAA             GACCGCC TCGAG GGCGGTC             TTTTTTTATCCTACT 100 36
 JC965_12945 NONE
         fbp 2678790 .. 2678810 -   -14  -5.08601   GCACGCCAATAAAAA            CGGGAGCC TTGAC GGCTCCCG            TGACGAAGGGACGCT 100 50
 JC965_12925 2672881 .. 2672891 -    -4  -3.49835   TGTAACAACAGAAGA                 TGAA TTA TTCA                 TAACGCAGCGCCTCC  50 19
        lolD 2672149 .. 2672161 -  -6.9  -2.73875   GCGGCTTGAACATCA                GGCGA CCT CCGCC                ATGATGCCGCTCACC  51 10
        lolE 2670870 .. 2670885 - -11.8  -5.20333   GAGTGACAATAAAAA              GGGCCC CGCA GGGCCC               GTTATCACATCCATG 100 45
         tig 2667861 .. 2667887 - -10.1  -5.07652   GTCCCTAAAATAAAA         TGGCCCGAGTG GAGAT CACACGAGCCA         TTATACTTAACAATT 100 62
        clpP 2667196 .. 2667212 -  -2.2  -3.32844   CTGCTGAGTTTACAA              CAGGAC GGGGT ACCCTG              CTCAGCCGCGCTGGC  44 27
        clpX 2665822 .. 2665851 -  -5.8  -4.56597   CCTTGGCCGTAAAAA       GCATGAAAGGGGC AAAAA GCCCCTTT-ATGT       GATTAAAAATCAGAC  75 43
         lon 2663237 .. 2663258 -  -6.5  -3.42056   AGTTGCAAGTGACAA           TCTGGCGCA AACC CGCGCCACA            TCACGCATTGCGACT  58 142
        hupB 2662758 .. 2662779 - -13.7  -4.62203   CGTAAATAATGAAAA           GGCGCACCG ATTG CGATGCGCC            TTGGTCAAGCAGTAT  95 108
        ppiD 2660752 .. 2660770 - -14.6  -5.76633   GTACAGATAAAAAAA             CGGCTCCA TGA TGGAGCCG             TTTTCACACTTGGGG 100 54
        uvrB NONE
 JC965_12845 2653489 .. 2653507 -  -6.6  -3.21199   TACCCATGAAGTGAA             CGGCGTGG AGT CTACGCCA             ATGAGACCTGGCTCA  54 132
 JC965_12840 2652759 .. 2652781 - -17.8  -3.71848   TCGGCCTACCAACAA           GAAGGGAGCC ATC GGCTCCCTTC           TTTCATGTCGTGCAC 100 48
        fadR 2649292 .. 2649307 - -11.8  -5.60993   CCGGGCATAAAAAAA              CGCGCC ATCA GGCGCG               TTTTTCTTGGATCAG 100 46
        sstT 2640394 .. 2640413 -   -15  -5.27335   GCGCGCAAATAAAAA            GCGCCCTC CGAA GAGGGCGC             CTGTGCAGAGCGGAA 100 53
 JC965_12780 2634401 .. 2634418 - -12.7  -5.40072   GGGCCCGCAAAAAAA             GGCGACC CGAG GGTCGCC              TTTCAACATGCTGCT 100 85
 JC965_12770 2633218 .. 2633239 - -10.1  -5.10461   GTCAGGTAATAAAAA           GGATGCCCC AATC GGAGCACCC            TTTGATTTCAATTAA 100 37
 JC965_12765 2630349 .. 2630363 - -12.8  -5.92337   ACAGATGAAAAAAAA               CCCCGC ATC GCGGGG               TTTTTCACAGGAGCA 100 45
 JC965_12745 2624317 .. 2624336 -   -15   -3.6947   AGAAGCTCAATACAA            TCGCCCCC TGGC GGGGGCGA             ACGAGTGGGTCATCA  90 87
 JC965_12740 NONE
 JC965_12735 2620553 .. 2620577 - -14.4  -5.46276   AATAGACATAAAAAA          TCCGGAACCA GTGAT TGGTTCCGGA          TTGTCCTACAGCAGA 100 109
 JC965_12705 2616316 .. 2616347 - -18.8  -3.10715   CTCATGACGACTGAA      TGGAAGAGGGGGCC TGCG GGCCCCCTCTTTCA       TGTATGCATTGCGAC  95 46
 JC965_12690 NONE
 JC965_12685 2612117 .. 2612147 - -12.6  -5.00895   GTGATCACATAAAAA       TAAGAAGAGGGGCC AGT GGCCCCTCTTTGTA       TGGATGGGATGGCTT 100 39
 JC965_12675 NONE
        torA 2606106 .. 2606124 - -13.1  -4.77567   ACTGCGATAAGAAAA             CGGCGCC TCTAT GGCGCCG             TTTTGTCTGCATGCA 100 47
 JC965_12645 2602664 .. 2602680 -  -9.4   -4.3467   ACGCCCATAGCAAAA              GAGGCC TATTC GGCCTC              TTTTTTGGTGATCTC  79 14
 JC965_12630 2599943 .. 2599978 - -25.6  -3.04203   CGAAGGGATAAATGA    CAGAGGGGCGG-CCGTC GAT GACGGGCCGCCCCTCTG    GTTTCCGACCGAATC 100 105
        folK 2595674 .. 2595695 - -15.9  -2.78384   CGGGCCGCCATGACA           TGAGGCGCC TTTG GGCGCCTCA            TGTGTGTGAACGGCT  82 40
 JC965_12595 NONE
 JC965_12590 2593241 .. 2593254 -  -5.2  -4.07885   GATTTCGCTGCAAAA               CCCG ATCCTG CGGG                ATGTGAAGCCTTGAG  64 141
 JC965_12580 2591450 .. 2591469 - -12.2  -6.06723   CGGCGTAAAAAAAAA            CGGCAATC CGAA GATTGCCG             GGAGGAATGTATTCG 100 216
 JC965_12555 2584983 .. 2585001 -   -16  -5.60993   TCGGCCATAAAAAAA             CCGGAGCC AGT GGCTCCGG             TTTTTCATTGTCCGT 100 48
 JC965_12485 2563472 .. 2563498 - -10.8  -5.32882   TATCAGGACAAAAAA         TCGAGGGAGGCA TGA TGCCTCCCTCTT         TCTATTGCAAGCCCC 100 337
 JC965_12465 2558458 .. 2558494 -   -16  -3.59966   AGAGCGCACACAGAA   CATAC-AGACAGGGCCC CGCG GGGCCCTGTCTTGTAGG    GGATGCGCCTTACTG  91 312
        coaD 2556643 .. 2556668 - -17.7  -3.05463   AGTGCGTTGATGCAA         CAAGGGCTACC CGCG GGTAGCCCTTG          TTCGTTTCTGCCCAT  89 53
       coaBC NONE
         dut NONE
        slmA 2550134 .. 2550151 - -12.7  -3.88001   TGCCACAAAAAGCAA             GGGAGGC CAAG GCCTCCC              GTTTTGTCACAACCC  89 295
 JC965_12400 2549142 .. 2549173 - -14.4  -4.01137   CACAGAAGGCAGAAA      CGACAGTGCCAGCC CGAA GGCTGGCACTGGAG       AACGCACACCGAGGA  95 41
         pgi 2546767 .. 2546787 - -18.3   -5.5353   GATAGCAATAAAAAA            GCCCCGCTC ATC GAGCGGGGC            TTTTGCATTCTGGAG 100 52
        ilvY 2544090 .. 2544102 -  -6.2  -3.09516   TGCCGGATCAGCGAA                GGCC TCCCT GGCC                GCGTGCGGTGTCCCA  52 5
 JC965_12375 NONE
 JC965_12370 2540766 .. 2540783 - -12.7  -3.92522   CGCGAATCGCATAAA             GCCGACC CCTG GGTCGGC              TTTTTTGTGCCCGTC  89 362
 JC965_12360 2538453 .. 2538471 -  -4.4  -4.08216   CCAGGTGCCGGAAAA             CACCGTAC TGG GAGCGGTG             CGTTTTGACTACTCC  61 349
        bioB NONE
        bioF 2534098 .. 2534116 -  -8.8  -3.61178   TCGACCGACTGGAAA             CGCTCATG CAC CATGGGCG             CCCCCTCTCTCGTCA  68 10
        bioC 2533256 .. 2533274 -  -7.4  -3.57971   ATATCCATGGTGAAA             GGCAGG CGCACGT CCTGCC             GCTGAAGGGGTGGGT  63 59
        bioD NONE
        htpX 2531492 .. 2531511 -   -15  -4.27316   CCCCGGAATGCAAAA            CGGCTGCC CGAG GGCAGCCG             TTTTCTTTAGATAAC 100 47
 JC965_12315 NONE
        nifJ 2524032 .. 2524057 - -10.4  -4.13767   CTTGGCACCGGAAAA         CGAAGCGGGC CAACAT GCCCGCTTTG          TCATACCTGTTTCAT  81 48
        cysM 2517571 .. 2517585 -  -8.5  -3.14132   CGGGCCTGGGAGTAA               CGGGC CCCTT GCCCG               TCAGACATCGGGGGT  60 26
 JC965_12250 2513276 .. 2513305 - -19.5  -3.60098   AGGTGCGACCCCAAA       CATGAAAAGGCCC CTCG GGGCCTTTTCATG        TTGTTGCCGGGTCAG 100 37
        aspS 2503011 .. 2503028 - -12.7  -3.71649   GGGGGAAACGGGAAA             GGCCGCA TCGC TGCGGCC              TTTGTTGCCGATAAC  85 44
 JC965_12200 2502067 .. 2502084 - -12.7  -5.71712   TGGCACATAAAAAAA             CGGCAGC CCGG GCTGCCG              TTTTTGCGAAGGTGA 100 147
 JC965_12195 2500179 .. 2500210 -  -9.4  -4.07687   ACTTTTTTCTGAAAA      TCAAGGCGGCCTTC CCCG GAAAGCCGCGATGA       ACCTTTTTTTATGGT  75 55
 JC965_12185 2498618 .. 2498658 -  -4.6  -4.15841   TGATGAAACGAGAAA TGGCCCCAGGGCCCCGCCGT CAG ATGACGGGGCCA-GGGGA-A TCCGGGAGAAACCGG  61 60
 JC965_12180 NONE
        arsB NONE
        arsC NONE
 JC965_12165 2495333 .. 2495349 - -13.7  -4.72272   GGCGCCCATGAAAAA              GAGGGCC TTG GGCCCTC              TTTTTACTGCAAATC 100 103
        fliE NONE
        fliF NONE
        fliG NONE
 JC965_12145 NONE
        fliI NONE
        fliJ NONE
 JC965_12130 NONE
        fliL NONE
        fliM 2485512 .. 2485527 - -10.4  -3.02511   CTCAGTGTTGCAACA              CCTCCC CGGG GGGAGG               ATCAATCAGGGTGTT  67 27
        fliN NONE
        fliO NONE
        fliP 2483936 .. 2483967 -  -6.5  -3.05384   TCCTCCCCGAGTGAA      GGGGAGAGCCG GGGGGAGGGT CTGCCCTCCCC       TAACCACCCGAGCCC  54 25
        fliQ 2483496 .. 2483522 -  -3.6    -3.214   GTCATGACAGCAACA         CTCCCGGCAG GGGCAGG CCAACGGGAG         GACGCAGGCACCGGT  46 74
        fliR NONE
        flhB 2481369 .. 2481385 -  -9.3  -3.14211   AGCTGCCTTCACCAA              GCAGGCC AAA GGCCAGC              CCAGGCCATGGGGCG  63 123
        flhA NONE
        flhF NONE
 JC965_12075 NONE
 JC965_12070 2475910 .. 2475923 -  -5.9  -3.34517   AGTTCCTCCTAAATA               GCCGC CAAG ACGGC                TCACTTACATGATGC  54 107
        cheY NONE
 JC965_12060 NONE
 JC965_12055 NONE
 JC965_12050 NONE
 JC965_12045 NONE
 JC965_12040 NONE
 JC965_12035 NONE
 JC965_12030 2468081 .. 2468092 -  -7.2  -3.14564   TGATCCTTGTATGAA                CCCG TCAA CGGG                 TAAAATTAGCAATAA  57 63
 JC965_12025 NONE
 JC965_12020 2467080 .. 2467103 - -19.6   -4.1891   CGGGCCGAACAGAAA          GCGGGGAGGC ACCG GCCTCCCCGC           GACACATCCGTCAGC 100 36
        ccmA NONE
        ccmB 2465584 .. 2465595 -    -3  -3.73072   AATCTTTTCACCAAA                TCAA TCAG TTGA                 CACTCACCCGCAGCG  53 18
 JC965_12005 NONE
        ccmD NONE
        ccmE 2463935 .. 2463950 -  -2.5  -3.92373   GATTGCACGGAGAAA              CCTGCC GATTT GGC-GG              TATAAAGAAGTGAAT  54 59
 JC965_11990 NONE
 JC965_11985 NONE
 JC965_11980 NONE
        ccmI 2459636 .. 2459663 -  -6.8   -3.0281   GATATGAATTATACA        GGGGGCCCACCC CAAG GGGTGGGCCAAA         AGCGTATTAGAGGGC  53 32
 JC965_11970 2458600 .. 2458626 - -11.5   -4.9725   ATGTTCATAGAAAAA         CGCCCCAGGCC ATCGA GACCCAGGGCG         GTGAAGATATCAAAG 100 178
 JC965_11940 2450618 .. 2450639 - -14.5   -4.8543   CAATTCTGATAAAAA           CAAAGCGCC TGAT GGCGCTTTG            TTTTTTTATGGGCCC 100 44
 JC965_11930 2448608 .. 2448641 - -17.7  -4.19238   CTGTGAAGGGGAAAA     TG-AAAAGGCCAGAGC CAA GCTCTGGCCTTTTGCA     TGTCAGCACACCCGG 100 58
        dusC 2443251 .. 2443271 -  -8.1  -2.78816   TGAGCCTTCATCATA            GGGCGCCGC GGG GTGGCGGCC            AAGTCTAGGCCTGTG  57 30
 JC965_11900 NONE
 JC965_11895 2441295 .. 2441310 -  -4.7  -4.58663   AGCAGCCCCCAAAAA              CGAGT GATAAA ACTCG               GCCAGTATAGGGAAA  71 67
 JC965_11890 2440763 .. 2440781 - -14.6  -3.44527   TACGCAGTACGAGAA             GGGGAGTC CAT GACTCCCC             TTTTTCATGCCTGTG  85 146
        hisG NONE
        hisD NONE
        hisC NONE
        hisB 2428399 .. 2428413 -  -4.9  -2.66316   TTCCCCATCACAGCA               CCCCC TTGCT GGAGG               GAAGCTCGCTCCCTT  43 3
        hisH NONE
        hisA 2426972 .. 2426991 -   -15  -2.71125   ATCGGGGAGAAAGAG            GCCTGCCC GGAT GGGCAGGC             TGTCTGATGCCAGAA  80 50
 JC965_11820 NONE
 JC965_11815 NONE
 JC965_11810 2419621 .. 2419644 -  -3.8  -3.98826   CCATGAAGGGAGAAA          CGACA-GGCCC GGC AGGCCGTCTCG          TCGCCTCTGGGCACC  58 62
        hisF NONE
 JC965_11800 2418061 .. 2418077 - -15.1  -4.12225   AATCATGAAATGAAA              CGGGCCC ACA GGGCCCG              TTTTGTTGAACAGAA 100 49
 JC965_11775 NONE
        pbpC 2409077 .. 2409110 - -19.7  -3.47403   GGAATCGACAATCAA     CTGACGGCATCGGGA CCAC CCCCGATGCCGTCAA      TATTCTGGCGCTCAC 100 48
        thiI 2406428 .. 2406445 -  -8.4  -5.65927   GAGTGAAATAAAAAA             TCCGGC GCCTTG GCCGGA              TTTTTTATACGCGTC  95 52
 JC965_11745 2403806 .. 2403822 - -13.7  -5.24129   GGCGCCCATAAAAAA              GGCCGAC AAT GTCGGCC              AAAGAAGAGCTTACG 100 221
 JC965_11740 2402378 .. 2402393 - -10.4   -5.5112   GGCACCAATAAAAAA              GCCGAC AAGC GTCGGC               CAATCAAGTATTCAG 100 176
 JC965_11735 2401000 .. 2401030 - -11.9  -2.84581   CAACGGATGAAGAAG      CAGGCATGGCGGCC TGAG GGCCGCCATGT-TG       AGTTAGCGTCGAAGA  71 115
 JC965_11730 2400615 .. 2400629 -  -4.2   -3.6993   TATCGACTTAAAATA               TCAGGT CAC ACCTGG               CCATCGAACAACAGC  54 16
        fliD 2399181 .. 2399196 -    -4  -2.51225   TACATAATTCAACAC              TCTCGA TCTA TCAAGA               CTTCTGATAACTCGT  41 20
        fliS 2398688 .. 2398704 -  -2.1  -3.01712   GCTGCTGCCGCAACA              GCGTCTC CAT GAGGCGG              GCATTCTCGTCCAGT  41 69
 JC965_11715 NONE
 JC965_11710 2396293 .. 2396312 -   -15  -5.00642   CAAGGGATAGAAAAA            CACCGGCC CAAG GGCCGGTG             TTTTTATTTGCTTAA 100 51
 JC965_11635 2381334 .. 2381356 - -13.4  -4.82901   TGGCGGTGAGAAAAA           CAACGGGGCC CAG GGCCCCGTTT           TCATTGGCTGCGGCC 100 45
        tnpA 2372012 .. 2372031 - -11.4  -3.40141   GAAAACGCCAAGCAA            GCAGCGCG TTTT CGCACTGC             GCTTCAGTGCCATAG  75 220
 JC965_11560 2370215 .. 2370227 -  -9.1  -3.98052   AGAGTAAAAGAAAGA                CGCAG TTC CTGCG                GGTAGAAAAATGGTG  73 78
         amt 2365368 .. 2365387 - -12.1   -5.4505   CGCCCCAATAAAAAA            CCGCCGG ACGGGG CCGGCGG             TATGACATTCATGGC 100 48
        rlmD 2363766 .. 2363783 - -11.3   -5.9873   CGACCATAAAAAAAA             CGACTCC CTCA GGAGTCG              TTTTTATCAGAGCCA 100 69
 JC965_11530 NONE
 JC965_11525 2362948 .. 2362964 -  -5.7  -3.40522   ATCGTTCGACTACAA              CAGCGTC ACT GGCGCCG              TGACTCGCCAGTTCC  56 14
 JC965_11515 2361455 .. 2361466 -  -3.6  -3.34962   GGTCACATTTTATAA                GCCA CAAA CGGC                 CTGAACATCGTTTAA  48 100
 JC965_11510 2359998 .. 2360026 - -19.7  -2.93089   CACCACCCCAAACGA        GAACGCCACAGCA AAT CGCTGTGGCGTTC        GTCTTTATCCTGTCA 100 52
 JC965_11505 2359646 .. 2359664 - -13.2  -3.09516   CCGGGCATTAGTCAA             TGCCAGCA CCC TGCTGGCA             TCGCCTATTTCAGCC  75 120
        deoC 2358562 .. 2358595 -  -6.5  -2.93432   ACAGACCGAACCAGA     TCCGGAAGGGGGCAG CGCA CCGCCCCCTGCCACC      GCTTAGTAACCGCTG  53 28
        deoA NONE
 JC965_11490 2355913 .. 2355934 - -10.1  -4.12738   GTACATTAAAGGAAA           CCGGGGC-CC TGT GGCACCCCGG           GCAGGCGAACCGGCC  79 52
        deoD 2355068 .. 2355087 -   -15  -5.64274   TGAGGCATAAAAAAA            CGGCGACC CCTG GGTCGCCG             TTTTTGCGTGGAGCC 100 52
 JC965_11480 2354098 .. 2354128 - -13.3  -3.54424   TGTCAGCCCCCCAAA       GCAACGGGGAAGC CTCAT GCCTCCCCGTTTC       TTGACCCACTCCCAG  84 93
        serB NONE
 JC965_11460 2348987 .. 2349004 - -12.7  -5.60689   GGAGACAACAAAAAA             CGGGCAC GCAA GTGCCCG              TTTTTTGTCTATCAG 100 37
        radA 2345087 .. 2345104 - -11.3  -5.93809   CGGGCAGAAAAAAAA             GGAGCGT CCAT ACGCTCC              TTTTTCATGGTCGGT 100 40
        hupA 2343445 .. 2343460 - -11.8  -5.46657   GATGGCAAGAAAAAA              CCCGGC ACAA GCCGGG               TTTCATTTGATTACA 100 49
 JC965_11430 2342889 .. 2342908 - -16.4  -5.29445   CCCGAACAAGAAAAA            GCCGGCGC CCCT GCGCCGGC             TTTTTTGTCACCACG 100 62
         zur NONE
 JC965_11410 NONE
 JC965_11405 2340378 .. 2340399 - -15.9  -4.49556   TCTTGACCAAATAAA           GAGGCCAGC ATTC GCTGGCCTC            TTTTTTGTTGGTGCA 100 71
        srmB 2336758 .. 2336777 - -13.6  -4.40237   CAGCAGACAGCAAAA            CGGCCATC CTGG GATGGCCG             TTTCAACTGTGCTCA  95 47
 JC965_11370 2332864 .. 2332897 -  -8.8  -5.78622   TTACCTGAAAAAAAA     GCACGA-CCGGGGTG TTTCT CGCCCCGGCTCTTGC     TCATGAATAGTCACG 100 26
 JC965_11365 NONE
 JC965_11360 NONE
 JC965_11355 NONE
 JC965_11350 2330592 .. 2330617 - -18.3  -5.41143   CACCGGGCAAAAAAA         TGCCCCGCCCC CGTG GGGGCAGGGCA          TCTGCATTCACCCTG 100 45
 JC965_11330 NONE
 JC965_11325 NONE
 JC965_11320 2324902 .. 2324919 -  -9.1  -5.89921   AGGATAATAAAAAAA             GCCGACC CAAG GATCGGC              AAGTGCGTCAGAGGT 100 114
         rrf NONE
 JC965_11305 2323564 .. 2323585 - -15.9  -5.04601   GCCAGAAAGCAAAAA           GGCCTTCCC GATA GGGAAGGCC            TTTCAATTTAGTGGC 100 37
 JC965_11300 NONE
 JC965_11295 2321447 .. 2321470 - -11.2  -5.73339   ATAAGCATAAAAAAA          GGTCTTTTAT ATAA ATAAAAGACC           TAAAAGACGGAGCGG 100 125
        cysT NONE
        cysW NONE
 JC965_11280 2318427 .. 2318445 -  -3.7  -2.78463   ATTGCCGGGATCATA             GCCCGGC AGCAA GCCTGAC             AGAGGGCCGCACCTC  43 52
         cbl 2317367 .. 2317387 - -18.3  -4.56883   TCAACATCAAACAAA            CGGGGAGCC CAT GGCTCCCCG            TTTTTCATCTATCCC 100 46
 JC965_11260 2311634 .. 2311651 - -12.7  -4.80959   CAACGCACAAGAAAA             GAGCCCC TGAT GGGGCTC              TTTTGACTGTGCAAC 100 48
 JC965_11255 2310757 .. 2310787 - -13.4  -3.85817   ATGGTCTGCGACAAA      TGC-AACGCCCGC ATGAGA GCGGGCGTTGGCA       GGCGGGATCAGGGCT  88 33
 JC965_11250 2309920 .. 2309963 -  -7.5  -4.17132   AAACGGTTGAAGAAA GTGATCA-GGGCCAGCAG CCCTATCAT CAGCCAGCCCATGATCAC CTCCTCATCCGGTGC  71 22
 JC965_11245 2309574 .. 2309598 -  -9.3  -3.08371   GACATTCCCAACAGA          GCGGATATCCC ATC AAGACATCCGC          CATGCCGGATCACGG  63 49
 JC965_11240 2307918 .. 2307943 -  -5.3   -3.4252   GTCCACGCAGGAGAA         GGGCAGCCAGCG GCT CACCGTC-GCCC         TGAACTCGGCCCCCT  54 55
 JC965_11235 NONE
 JC965_11230 2306627 .. 2306648 -  -7.3  -4.09685   CTGGACGCCCCAAAA           TGATGCCTG GCCG CAGGAATCA            GGGCTTCTTGGTATA  71 23
 JC965_11210 NONE
 JC965_11205 NONE
        bcsA NONE
        bcsB NONE
        bcsZ NONE
        bcsC 2292314 .. 2292338 - -15.7   -3.9392   TCCTATCTGAAATAA          GGGCGCCCG GTGATGA CGGGCGCCC          CTGTCAGTCGAAGTC 100 29
        dmeF 2290868 .. 2290905 -  -5.4  -3.21199   TAGCGAGGAAGGCAA   GGTTCACGCCAGCCTG GGCTTT CATGCCGACGGGCACC    TGCTGCTGGAGCCGG  48 145
        pulA 2286178 .. 2286203 - -16.1  -5.35815   CACAGCAAAGAAAAA         GCGCGGCTGCC GGTC GGCAGTCGCGC          TTTGCTTACTCTCTC 100 116
         tpx 2282852 .. 2282881 - -25.1  -5.08601   GGAGCGCAATAAAAA       CGGCCTGCCCCGT GTGA ACGGGGCAGGCCG        TCAGGCAATCAGCCT 100 51
 JC965_11150 2281112 .. 2281132 -  -6.7   -2.8779   ATAAGCGACATGATA            GGGGCGCTG CAA CAGAGCACC            CGGCAACTGTCCGAT  50 433
 JC965_11120 2276766 .. 2276786 - -12.5  -2.78463   ATCGGTTTGATGACA            GGCCCGCCA TGA TGCCGGGCC            GGGGGGAAGCGCCGC  74 74
 JC965_11115 2275633 .. 2275652 - -12.1  -3.25823   GGGCGCCCACATCAA            GGCGGGG TTCCCT CCCCGCC             CGGGGCCGACATCCG  77 44
 JC965_11110 2273197 .. 2273226 - -17.9  -2.71712   GCGTGGCCCCCAAAG       CGAGAGGGCAGCC CGCG GGCTGCCCTCTCT        GGTGCATGGATGACA  86 50
        truA 2272282 .. 2272294 -  -3.3   -4.7497   CCCAGTTACTAAAAA                CTGGT CGT ACCCG                GTGCCGAGTCCGGCA  70 6
 JC965_11100 NONE
        folC 2269987 .. 2270017 -  -9.7  -4.14739   TTATCCAGTGCAAAA      CCCGGC-CCGTCGT CACG ATGACGGAGCCAGG       GGAGCGAACGGCTCA  79 38
        dedD 2268996 .. 2269026 - -17.7  -5.71712   TTGGACACAAAAAAA      GACCGCGCC-CATG TTGC CATGAGGCGCGGTC       TTTTCATTTCATCGT 100 45
 JC965_11065 2261975 .. 2262008 - -26.9  -2.87211   AGGGCGGCGCACAGA     GACGACAGCAGGGCC CGCA GGCCCTGCTGTCGTC      GGTCGTTACAGCTTG 100 31
 JC965_11060 NONE
 JC965_11055 2260411 .. 2260438 - -15.6   -4.3586   CCAGCCAGACGAAAA        GAGCCCCAAGGC GACT GCCTCAGGGCTC         TTTTTTGGATGTTTC 100 458
 JC965_11020 NONE
 JC965_11015 2249147 .. 2249170 -    -6  -2.87132   GGCGGCGTTCAGATA          GTTTGGCG-GG GAT CCGCGCCAAAA          AATGTAAATGAAATG  49 104
        hppD NONE
 JC965_11005 NONE
 JC965_11000 NONE
        maiA 2244957 .. 2244993 - -11.6  -3.34468   GGGCAAGGAAAGAGA   CG-GCAGACCGGGCCAA CGCG CTGGTCCGGTCTGCACA    GCTTCAGGGCTGGGC  74 29
 JC965_10965 2239102 .. 2239123 - -17.3  -3.91032   CAACGATGGCACAAA           GAGGCCCGC CATG GCGGGCCTC            CTGCATTCAAGGTGT 100 55
 JC965_10925 2231575 .. 2231592 - -14.1  -5.24531   ATGCTGGATAAAAAA             CCGGGCC CTCG GGCCCGG              AAAAAAACACAGGGA 100 57
        oxyR 2229832 .. 2229861 - -20.9  -3.90744   TCCCCCTGGAAACAA       CAAAAACCGGCGC CCAG GCGCCGGTTTTTG        TTTCGGGATGACGAG 100 50
        tapM NONE
        tapN NONE
        tapO NONE
 JC965_10890 NONE
 JC965_10885 2221964 .. 2221982 -  -3.8  -3.04122   TCTCAGTAGAAACCA             GGACTG GCAACCG CAGCCC             TTACGCCCCAGCCTC  44 87
        aroK NONE
        aroB NONE
 JC965_10870 2218653 .. 2218671 -  -5.8  -5.03314   GCTATGCCCAAAAAA             GGGGGGTG ATT CTACCCCC             TTCTTCGGGTGGCTG  86 42
 JC965_10865 2217713 .. 2217743 - -12.7  -3.99324   CGGCAGCATCAGAAA      TG-ACAACGGCCCC CTCA GGGACCGTTGTTCA       CTCAGCCGACGGCAA  89 27
 JC965_10860 NONE
 JC965_10855 NONE
        trpS 2215135 .. 2215160 -  -6.1  -4.66535   AAGGTGTAAAACAAA         GAAAGCCAGGC ATCC ACCCAGCTCTC          TTCTACTACACCTTC  75 49
 JC965_10845 2214631 .. 2214649 -  -2.3  -4.15044   CTTTGCGTTAATAAA             CCGGCGA TCACC TCACCTG             CTGTGCAGTCTGTCC  56 225
 JC965_10840 2213955 .. 2213970 -    -9  -2.83522   ATTTTTTCAGGAAAC              GGCCAA AAAG TTGGCC               AGCAACTGGTGCCCC  60 1
 JC965_10835 2212403 .. 2212434 -  -5.6  -2.80816   CTTTCATTGACGACA      GGTGGGGTCCCGGC TCCT GCCGGGAGGGCTCC       CCACCTCAATTTGGA  47 41
        astA NONE
        astD 2209779 .. 2209799 - -10.4  -2.98823   TTGCGGGTACAGACA            GGGGCACC TGTTC AGTGCCCC            TCTTTTATTTTCTTG  67 44
 JC965_10820 2208917 .. 2208932 - -11.8  -5.68039   AAATCCATAAAAAAA              CGCCCC AGGC GGGGCG               TTGTTTTCATGGCGG 100 44
 JC965_10815 2208348 .. 2208368 -  -6.7  -3.54129   GACACCTTCCTGAAA            GTGGCCGAG CAG CTCGGCGCC            AACCCGGCCAACTGC  59 176
 JC965_10785 2202296 .. 2202313 - -14.1  -5.06414   TGCGGGCAATAAAAA             GGCGGCC CGCA GGCCGCC              ATATCGTTTGCTGTC 100 42
        hemA NONE
        prfA NONE
        prmC 2192853 .. 2192880 -    -4  -3.01791   ACGGGGGCGGGAAGA        GCCCGCCCGTCA TCGT CAACGAGCCAGC         CGCCCCAGGGTCACT  44 13
 JC965_10695 2192453 .. 2192464 -  -5.8  -3.17723   TCATCCCTAACCGAA                CAGG CTGG CCTG                 CTTTTGTACCGCCAG  52 5
 JC965_10690 2191568 .. 2191605 - -12.7  -2.52464   CGGGGCTTGAATCCA   CATC-CGGCCGCTGTGCC CTG GGCACGGCGGCCTCGATA   TTCTTCCGCTTGATT  72 52
        kdsA 2190633 .. 2190651 -   -16  -5.47159   CGGAAGAAATAAAAA             TGCCCCGC AGA GCGGGGCA             TTTTTCAACCTAAGC 100 46
 JC965_10680 2189050 .. 2189065 - -11.8  -5.82281   AAAGAGATAAAAAAA              CGGCCC CCTC GGGCCG               TTTTTTCATGGGTGA 100 62
 JC965_10625 2173564 .. 2173574 -  -3.2  -3.58533   TGATAATGGCGGAAA                 TGGC CTG ACCA                 GTTGTGGTGCAAGGT  50 337
 JC965_10620 2172250 .. 2172267 -  -6.9  -2.78384   CGCCGCTCTACGAGA             TCCGCCG CCAG CGGCTGA              TCGACGGTCGCCCCG  49 436
 JC965_10610 NONE
 JC965_10605 NONE
 JC965_10600 NONE
 JC965_10595 NONE
 JC965_10590 2167046 .. 2167058 -  -4.9  -4.57569   GTACTGGCTGAAAAA                TGAAT GGG ATTCA                TGGCGTTATGCTACC  71 31
 JC965_10585 2166304 .. 2166325 - -14.5  -3.73775   GGCATGTTGAGCAAA           GAAGAGGCC TGAG GGCCTCTTC            TTCATTGCGCGGATC  91 39
 JC965_10575 NONE
 JC965_10570 2163098 .. 2163119 - -17.3  -4.63932   CAGGCGGCAATAAAA           CGAGGCGCC CAAG GGCGCCTCG            TTTTATTTGGGACCA 100 57
 JC965_10555 2159726 .. 2159742 - -13.7  -4.66609   TACTGCATTGAAAAA              CGGAGCC TCG GGCTCCG              TTTTTATTGGTGACT  95 421
 JC965_10545 2157346 .. 2157367 - -14.5  -4.14627   GGGTCAGATAAACAA           CAGGCCATC ATGT GATGGCCTG            TTTTTATGGTGGCAT 100 55
 JC965_10535 NONE
        ydiK 2154251 .. 2154270 -   -15  -5.09762   CGGTAATAAACAAAA            GAGCCGCC CTGG GGCGGCTC             TTTGCATCGGGGATG 100 50
 JC965_10525 2153175 .. 2153192 - -14.1   -3.4252   TGTGACGCAGGACAA             GGGGCGC CTCG GCGCCCC              TTGTCCTTGCTGGCG  85 57
 JC965_10500 NONE
        dhaR 2145617 .. 2145629 -  -2.6  -3.92143   CAAAAGGGGGAGAAA                GAGG CGAAT CCCC                GCAGCCTGAGCCGGC  54 217
 JC965_10470 2140926 .. 2140947 - -15.9  -3.87149   GCCACTAAATTGAAA           GGCCTTCCC TATC GGGAAGGCC            TTTTTGCTTTCTGGC 100 269
 JC965_10435 NONE
 JC965_10430 2132077 .. 2132090 -  -9.5  -5.40072   TCCTGGTCAAAAAAA               GCCCC GCAC GGGGC                GGGGTCTCAAGTGAT 100 166
        glnS 2130158 .. 2130174 - -12.3   -5.4505   CGGCGCAATAAAAAA              GCCAGCA TGA TGCTGGC              TTTTTTGTGTCCGCA 100 82
 JC965_10415 2128956 .. 2128978 - -19.2  -3.05384   TCCCTCTTCATGCAA           CAAGGGCCCC GAC GGGGCCCTTG           TTGCATCTGCAGCAG  95 45
        seqA 2126211 .. 2126231 -  -3.8  -3.55761   CATTGATGGGTTAAA            CGGCGCCG CACAC CCGAGCCG            TCAGATCCTCGTCAT  52 0
 JC965_10385 2124456 .. 2124476 - -12.6  -5.71712   CCCGACACAAAAAAA            GAGGAGCC ACCAG GGCTCCTC            TTTCACATGGGTTGT 100 52
 JC965_10375 2122949 .. 2122964 - -11.8  -4.49337   CAATACCAACGAAAA              CGGGCC CGCA GGCCCG               TTTTTTTTATTCGTT  91 32
 JC965_10320 2110972 .. 2110982 -  -8.2  -3.02166   CCTGCAAGGAAAGCA                 GCCG CAG CGGC                 CAGAAAAGAGAAAGA  58 66
 JC965_10315 2107044 .. 2107062 -   -16  -5.60993   TCTTCTACAAAAAAA             CGGGAGGC CAG GCCTCCCG             TCAATATATGCACTC 100 136
 JC965_10300 2106086 .. 2106114 -   -14  -3.93695   TTCACCACTCATAAA       GCAAAA-GGCGGG TTAT CCCGCCTTTTTGC        ATTCTACCGTGCCGT  95 40
 JC965_10290 2102766 .. 2102785 -   -15  -3.41878   CCCTTGAAGGCATAA            CCACCGCC AAAG GGCGGTGG             TGACATACCTTCATT  88 61
 JC965_10285 2100787 .. 2100816 - -11.3  -2.76696   TTTTGGGGCAAGAAT       GGGAGGCCGCCGC CACA ACGACTGCCCCCC        GAACTCAATAGGCGT  69 30
 JC965_10280 2099421 .. 2099440 -   -10  -6.22802   CCTGACAAAAAAAAA            CGGCCATC CAAT GATGACCG             TCGAAAGTAACGAAG 100 229
 JC965_10275 2098480 .. 2098493 -  -9.5  -2.78596   GATGGCGGCATGATA               GGGGG CGAT CCCCC                CCTTGGCAAACCTCA  63 117
        yciA 2097994 .. 2098031 -  -5.6  -5.07567   TGATACGGCAAAAAA  CCGGGC-TTGA-GCAGGA AATA TCCATCATCAATGCCCGG   CTCATCTGAGCAGAC  84 41
 JC965_10260 2096786 .. 2096806 - -12.6  -5.15969   TCGCAATCCAAAAAA            TACCCCGC TTGAT GCGGGGTA            TTTTTTTGTCTGCAT 100 78
 JC965_10245 2093561 .. 2093578 -  -6.3  -3.02144   GCAGCTTGCCGAAGA             CAGCGGCT ACC AGCC-CTG             ATGCCCGCTATCCGC  51 33
        dnaQ 2091795 .. 2091805 -  -8.2  -3.01712   GGGTCTCCTCGAAGA                 CGGG ATC CCCG                 CTCTGGCTGGCATCG  58 525
 JC965_10220 2089284 .. 2089308 -  -9.4  -3.25942   ATCGCTGGATAGCAA          TGACACGCTA GTCAG TAGCATGTCA          TGCCACCCATAATTA  65 64
 JC965_10215 2087863 .. 2087884 - -18.7  -4.77036   TTCCACCATGAAAAA           GGGGCCCCC GACA GGGGGCCCC            TTCTGTTTTTGCGCG 100 52
 JC965_10185 2082578 .. 2082617 - -17.8  -4.07568   CCGGGCTGGGGAAAA  GGGCAGTGTGCCAGCCCG GGGA CGGGCTGGCAAACACCCC   GCCCCCGCCGGCATC 100 58
 JC965_10180 2081887 .. 2081905 - -13.1  -4.66938   AGCGGCAATAGAAAA             CCGGCGC TCGGG GCGCCGG             TTTTTTTATGCCTGC  95 142
 JC965_10130 2071340 .. 2071363 - -14.6  -2.62184   TTGCTTGCGATATGA          CGGGGAGAGGC CTC GCCTC-CCCCG          GGGACAGATCAGACG  78 34
 JC965_10120 NONE
 JC965_10115 2067339 .. 2067364 -  -8.2  -3.71998   GATCCATCAATACAA         TCTGGCGCCC CGGGAT GGGCGCCAAG          GTTAGGTTCCGGATT  69 27
        potA NONE
 JC965_10105 NONE
 JC965_10100 NONE
 JC965_10095 2063570 .. 2063586 -  -2.1  -3.63515   CTTTACGCTCAATAA              TTCAGCG AGT CGCAGCA              AAAATCGCCCACAAG  48 59
 JC965_10090 2063358 .. 2063406 - -24.1  -3.01791   AGCTTTGCTTCAACA GACCAAATGCGAAAAGGCCGCTC ATT GAGCGGCCTTTTCAAATGTGGTC GGTGTGAGAGGATTC 100 21
        recQ 2060012 .. 2060029 -  -3.3  -3.40522   AGCGGTCGATGACAA             GGTCTAC CTGG GCCGACC              CTACCGGCGGCAGTA  48 26
 JC965_10065 NONE
 JC965_10060 2057674 .. 2057692 - -11.8  -2.54896   GGGTTAGGGAACCCA             TATCGCCA CCA TGGCGATA             ATCAAGGGGCGAGAT  70 114
 JC965_10055 2056933 .. 2056956 - -15.4  -5.70829   AAGATCACAAAAAAA          TTGACCACCC ATGG GGGTGGTCAA           TCTCATCAGGCTTGT 100 31
         rrf 2040212 .. 2040232 -  -5.4  -3.62032   ACACTAACCGGTAAA            GACCACGC TCAAT GCGTAATC            TAAAATTGGGTGCCT  56 37
 JC965_09980 2040091 .. 2040108 - -12.7   -5.4251   GGCAGATACAAAAAA             GCCTCCC GATT GGGAGGC              TTTCTTATTTAATGG 100 38
 JC965_09975 2038606 .. 2038642 -  -2.8  -2.64375   AAAATCTCGACAGCA   GGGGACAGCCGGG-CAA TTAA TCGACCCGGCAAGACCC    TAGCGGCGAAAGTCT  40 25
        crcB NONE
        ubiE NONE
 JC965_09960 NONE
        ubiB NONE
        tatA 2034797 .. 2034812 -  -2.6  -4.58663   ACCAGCTCCCAAAAA              CCGATGT CGA ACAT-GG              CTTAGGCCTGATCTT  65 27
        tatB NONE
        tatC 2033593 .. 2033620 -   -12  -4.28548   ACGGATGCATGAAAA        GAGGAAGGGAGC CTCA GCTCCCCTCTTC         CGTTTGTTGCTGCTC  90 11
 JC965_09935 NONE
        hemB 2031637 .. 2031662 - -19.1   -2.6927   ATCTGCCAGAGACGA         CAATGCCGGCC CGAG GGCCGGCATTG          TGAGGGCATGGACAC  91 49
        prlC 2029291 .. 2029306 - -10.4   -4.0896   AAAGGCTTGGGAAAA              GGGACC AAAA GGTCCC               TTTTTCTATCAAAAA  81 141
 JC965_09920 2026613 .. 2026630 -  -2.5  -2.68719   GCATGATAGCAGAAG             CGGGGGG TCAG CTCACCG              TGGTCAGATTCGCCA  38 15
 JC965_09915 2025747 .. 2025774 -   -20  -3.42147   GCCAATGAATAGCAA        GAGGGCCAACCT GATC AGGTTGGCCCTC         TTCGTTTGACGCTCA 100 61
        trxA 2022198 .. 2022222 - -15.1  -4.02581   GGTGATAAAACACAA          GGAGCGCATTA TTG CAATGCGCTCC          TTCTTGATTATTACA  95 36
         rho 2020722 .. 2020739 - -10.5   -5.4433   ATAGATAAACAAAAA             CCGCGAC CTGG GCCGCGG              TTTTGTCATTGAAGA 100 46
 JC965_09885 2019620 .. 2019630 -  -4.6  -2.75382   TATTTCATGCAAGTA                 CCCC AGC GGGA                 TCAGGTGGTCCCGCA  44 41
        ubiD 2018080 .. 2018136 -  -8.6  -2.78384   GGTCCGTCGAGCATA CCCAATTCGGCACGGCAATACCG-CAC TTTT GCGTCACAATGGCCGCGCCGCATCGGG GATCCCTCAGTCGAG  57 32
         fre 2017181 .. 2017197 - -13.7  -4.04318   CGTAGATAGCACAAA              CCCCAGC CAG GCTGGGG              TTTGTCGTTTTTATG  95 117
 JC965_09865 2014135 .. 2014154 - -16.4  -5.60993   TTTGCCATAAAAAAA            CGCCGCCC CAAG GGGCGGCG             TTTTTATTGGTCGGC 100 45
 JC965_09850 2011773 .. 2011795 -    -9  -3.60296   CAGCGCCAGTTCAAA           CGCCGGGTGG CCG CCACCCCGGG           CCAGTACAGAGCTCA  68 50
 JC965_09815 2004472 .. 2004503 - -17.4  -4.57837   AGAGGGGCCCAAAAA      CAGAAACCCCCTCG CTGG CGAGGGGGTTTCTT       GTTCATGGCACCCGT 100 48
        norV NONE
        norW NONE
 JC965_09795 1999635 .. 1999648 -  -2.4  -3.47322   GGGCAGGATAACCAA               CATC TGAGTT GATG                ATTTTGATCTGCATG  46 88
 JC965_09790 1998226 .. 1998239 -  -3.8  -2.90309   CGCCAAATAACAGCA               CCCA TTATGG TGGG                GAGCGCTATATGATC  44 157
        tnaC 1998066 .. 1998101 -  -2.6  -2.56914   CAGTTCAGGAATGGA   GGCGGGCTCGTGGCATG GCAGG CATGC--CGTG-CCGCC   GCGGGGAATTACAGC  38 34
        tnaA 1996410 .. 1996431 - -14.5  -5.82316   AGCAGTGAAAAAAAA           GGGCACAGA AAAA TCTGTGCCC            CTGACTCGTTATGCT 100 34
 JC965_09775 1995089 .. 1995109 -  -3.1  -3.57309   GAAAATGGGGGGAAA            CGGGCCGGA TCC TGCGCCCCA            TCCGTGGAATATGTT  50 71
 JC965_09770 1993674 .. 1993696 - -14.2  -3.44146   CTGTGTGACAAGCAA           GAAGGAGCCC ATG AGGCTCCTTC           TTTGTCATTGTGTGC  85 65
 JC965_09760 NONE
 JC965_09745 1989432 .. 1989447 -  -5.4  -4.83169   AGTCGCTGACAAAAA              CCGGTA AATT TACCGA               TCCGGTTGAGTTCAG  76 199
        mprF 1974904 .. 1974916 -  -3.4  -3.83758   AATCAACAGCAACAA                CATG GCTCT CATG                GGCCAACTCCTATTT  53 35
 JC965_09680 1974157 .. 1974175 - -17.4  -3.05844   GGGGCCACGGCAACA             GGGCGGCC ATT GGCCGCCC             TGTGTCGTTTTCCCA  89 52
 JC965_09660 1970267 .. 1970286 -   -15  -3.45023   CCATCACCATGACAA            CAGCCCCG CCCG CGGGGCTG             TTTCATTTCGCGTCC  88 43
 JC965_09640 1964941 .. 1964991 -  -6.8  -2.80935   ACTTGATTCATGAGA TGACTCCAGCCAGCCGGCACGGCG CACTC CGCCATGCCGGCATG--GGTATCA AGGGATGGGGATCAC  51 37
        araG 1963444 .. 1963460 -    -5  -3.29471   CGGTCAGCAGATCAA              CGGGCC GGCAT GGCCAG              ATTGAGCGCCTTGAC  52 5
        araH 1962344 .. 1962372 - -23.2  -4.07568   GCTTGCCGGGGAAAA        CACCGGGCCGGC GCGAG GCCGGCCCGGTG        ACGAGGAAAGACATC 100 43
        araC 1961308 .. 1961324 -  -9.4  -4.79352   TCATGGATAACAAAA              GCCCTC GTCAT GAGGGC              TTTGTCATCTCTGGG  86 47
 JC965_09610 1960278 .. 1960298 - -16.9  -3.20901   ACCCCATCAACGCAA            CACGCAGCC CAT GGCTGCGTG            TTTTGAAGAGCGGTT  88 133
 JC965_09580 1952694 .. 1952710 -  -9.4  -5.60864   GACACACCAAAAAAA              CGGGCT CAATC AGCCCG              TTTTTTTATGTTTCC 100 72
        fabB 1949272 .. 1949287 - -11.8  -5.46657   GAGTTCAATAAAAAA              GGCGCC TTTC GGCGCC               TTTTTCTATTTCGCG 100 61
        sdhC 1946121 .. 1946134 -  -2.4  -2.60714   CGAAAGTTGCAGAAT               TGGT TACCAT ACCA                GCACCCCCGCCAATA  38 15
        sdhD NONE
        sdhA NONE
 JC965_09535 NONE
        sucA 1940324 .. 1940341 -  -9.1  -2.88544   TTCCAGGTTCAGAGA             GGGTCCCG ACA CGGG-CCC             TCTCATCCACAACTC  60 43
        odhB NONE
        sucC NONE
        sucD 1936807 .. 1936829 - -17.8   -4.1891   GGCTTGCAATAGAAA           GAGGGAGGCA TCA TGCCTCCCTC           GATTTTTTGTCCTGA 100 128
 JC965_09510 1935875 .. 1935885 -  -8.2  -3.18264   GGGTGGAGCGATGAA                 CGCC AAT GGCG                 CGTGCGGTGGCAAGG  60 202
        istB 1930960 .. 1930998 -  -3.9  -3.69333   GATAATGGACCGAAA  CTGACGGAAAGAC-TGCT GCTC AGCACGCTTTTCCAGCAG   TCAGCGACTCAAATT  56 395
        umuD 1915104 .. 1915119 -  -6.8  -3.57462   CAGCTCAGGGCGAAA              CAGCCG CTCA CAGCTG               GCGTCAGGATTTGTT  60 45
 JC965_09430 1910092 .. 1910102 -    -4  -3.08133   TAGTGATGGACTGAA                 TGAT TAA ATCA                 TTCAGTCCATTTTTT  46 39
        ppk2 1907442 .. 1907460 -  -3.7  -3.28712   CCCGCTTGCCTAGAA             GCGCTCC GGAAT GATGCGC             AGGGGGTGTTCCGAG  48 1
 JC965_09410 NONE
 JC965_09405 1903967 .. 1903977 -  -4.6  -2.78384   GCCGCCTCTATCACA                 CCGG GGG CCAG                 GTCATTCGCGAGAAC  44 424
 JC965_09395 NONE
 JC965_09390 NONE
 JC965_09385 NONE
 JC965_09380 NONE
 JC965_09375 NONE
 JC965_09370 1897195 .. 1897221 -   -21  -4.93547   TGAATGAACGAAAAA         GAGGGCCAGTCT AGC AGACTGGCCCTC         GTCACACAGCGTTGC 100 55
 JC965_09365 NONE
 JC965_09360 1894243 .. 1894271 - -12.3  -3.75169   GAGTATGGGAGGAAA        CGCAGGCCCGACA AGG CGCCGGGCCCGGG        ATCAGGCCTGGCTCA  83 27
 JC965_09355 1892190 .. 1892217 - -15.6  -5.31275   GCTGATCAGAAAAAA        GAAAACCGGGCC AATC GGCCCGGTTTGC         TGAAGTTCAACCCCC 100 44
 JC965_09350 1891244 .. 1891276 -  -8.9  -3.42663   AGCACTACTGAAAGA      TGCCTCCCTGTGGCC TCA GGCAGCGGGGCGGCA      TTTGTCTGGCGTCAG  66 37
 JC965_09340 1889901 .. 1889941 -  -7.4  -3.74747   TTAATCGGCAGCAAA  TTCTGTGAGCCGACGCGC ATCCG GCGCGTCAGGTCGCCGGA  CTGGACGCTATTTTG  67 33
 JC965_09335 1889525 .. 1889544 -  -2.8  -2.78384   TTCGTCGTTATGAGA            CACGGCAGG CTC CCCGC-ATG            AAAATGAGGGAGCCA  41 125
        smrA NONE
 JC965_09325 1887284 .. 1887305 -  -2.9  -3.53733   GGGAGGGGACAAACA           GCTCCC-CTC TGT GAACGGGGGC           GGGGTTAGCTCCTCC  48 81
 JC965_09320 NONE
 JC965_09315 1884900 .. 1884927 -    -2  -3.64703   CCCGCTCGAGCGAAA        GGCGATGGG GTTGCAAGCGG CCC-TCGCC        GGTCTGCCGCTTCCT  49 216
 JC965_09280 NONE
 JC965_09275 NONE
 JC965_09270 NONE
 JC965_09265 1877955 .. 1877971 - -10.8   -4.4595   CCAGAAAAGCGAAAA              CCCGGC GCGAG GCCGGG              TTGTCTGAAGGATGG  88 38
        gltX NONE
 JC965_09245 1873281 .. 1873300 - -12.8  -3.54181   AGGCCAAAATACGAA            GGGCCCCC GTCA GGGAGCCC             TTTTCATGCCATGGC  81 47
 JC965_09240 NONE
 JC965_09235 1872840 .. 1872853 -  -2.3  -2.61582   CAGCTGAGCTATAAC               CCCAC AAAG GTCGG                CCTGGGTGATACACA  38 78
 JC965_09230 1872734 .. 1872756 -  -3.5  -3.06312   AAATTCGGTACTCAA           TGAATGG TTCTGGCGG CCATTCA           TCCTCAATAATGGTG  46 36
 JC965_09225 NONE
 JC965_09220 1872491 .. 1872511 - -18.3  -5.31519   ACAGGCAAACAAAAA            GGCCACCGC GAT GCGGTGGCC            TTGGTGCTTTCTTGC 100 47
 JC965_09210 1866092 .. 1866111 - -13.6  -5.66684   CAAGGCACAAAAAAA            TCCGGAGC CTGG GCTCCGGA             TTGGGTCATTGCCTT 100 163
 JC965_09170 NONE
 JC965_09165 NONE
 JC965_09160 NONE
 JC965_09155 1852319 .. 1852329 -  -6.8  -2.79915   ATTCATGGCAGCAGA                 CGAC CTG GTCG                 CCTTCCCGCCGCCAG  51 74
 JC965_09150 1851184 .. 1851201 - -12.7  -3.20227   CTCCAACCATGAAGA             TGGGGCC CGCA GGCCCCA              TTTTTTATCCCGTTT  75 109
         gpt 1847711 .. 1847740 - -16.5  -4.02334   CAGCCACACCAGAAA       CGCATTGAGCCCC AAAA GGGGCTCAATGTG        GTCAACCTTGCATCA 100 99
        frsA 1846334 .. 1846354 -  -6.9   -2.6563   CTGTTGAACAAGCCA            TACCATCAC ATG GTGATGTTA            CATTTTTAGTTTTAT  50 42
         crl 1845841 .. 1845852 -  -5.8   -3.4052   CTGCAAGGCAATTAA                GCCT CGCC AGGC                 AGTTGCGGGCTCGGT  56 89
        proB NONE
 JC965_09120 1843324 .. 1843359 - -11.2  -5.52023   ACGAGCAATAAAAAA    GCACAAAAATGCCGAC CTGA GTCGGCATTGTCCTGC     TTGCTGAGCGTGCCT 100 44
 JC965_09115 1842093 .. 1842113 -  -9.7  -3.60296   CAGGCCGAGCTCAAA            CTGGTCCAC GTG GTGGATCAG            CTGCACGGCTTCGAC  68 498
 JC965_09105 1841015 .. 1841044 - -12.1   -3.8211   GCTGAGGCAGAACAA       GCGGGGCCCGATG ACGG CATCAGGCCCGAC        AGCTAGGGCAGTGGC  83 28
 JC965_09095 NONE
        cobA 1836798 .. 1836812 -  -7.8   -4.2349   GGGGTAGAGGGAAAA               TCGCCC CTC AGGCGA               CCCGTTCCAGTGCCT  74 18
 JC965_09085 1835861 .. 1835887 - -23.8  -5.52384   TCGCGACCAAAAAAA         GCCCCGCCGATC CGG GATCGGCGGGGC         TTCTTTGCCCTGTTG 100 233
 JC965_09080 NONE
 JC965_09075 1833430 .. 1833440 -  -4.6  -2.57092   AATGTGATTAACGCA                 GCAC CTG GCGC                 TTGTCCCAGGACAAC  43 7
 JC965_09070 NONE
        nirB NONE
        nirD 1829511 .. 1829530 - -13.6  -5.24129   GTCGCGCACAAAAAA            TCACCGGG CAAG CCCGGTGA             TAGAAAAACGGTTTT 100 54
 JC965_09055 NONE
 JC965_09050 1827272 .. 1827289 - -12.7  -5.06414   TTCGCGCAATAAAAA             GAGGGCC TGCT GGCCCTC              TTTTGCATCTTTCGC 100 157
 JC965_09000 NONE
        truC 1820092 .. 1820114 -  -9.1  -3.14051   GGATGGGTAGGAAGA           GCCCCCC TGAACAGGC GGGGGGC           ACGCGATTGCGCAGG  63 131
 JC965_08990 1819538 .. 1819587 -  -7.1  -4.40963   ACGCCCCAAAAATAA CCCCCCCCCGACAGCACACTCAC GGAG GTGAATTTATTCTCGGGGAGAAG GGTCTGGCTACAGTC  74 33
 JC965_08980 1817748 .. 1817770 - -11.9  -5.40072   CGTGTTGTAAAAAAA           GAGCCCCCG TCATG CGGGGGCAC           TTGCAGTCATGACGT 100 48
 JC965_08975 1816685 .. 1816704 - -10.7   -4.7497   TCTACCGATTAAAAA            GGCCTCC AACAAG GGAGGCC             TCAAATAAATATTAT  95 62
        ptsG 1814828 .. 1814845 - -12.7  -4.77157   GCAACCCAGCAAAAA             GGGAGGC TTGC GCCTCCC              TTTTCGGAACTCGGA 100 55
        rpsB 1808392 .. 1808412 -   -14  -4.35604   TGAATTGACAAGAAA            CAGGGGCC ACAAG GGCCCCTG            CTAACCAATTACATC 100 76
         tsf 1807430 .. 1807451 - -15.9  -4.03234   TCCTGGTCATATAAA           GACCGCGAC ATAA GTCGCGGTC            TGGGGAAACGGAAAA 100 51
        pyrH 1806647 .. 1806663 - -10.1  -3.41878   TGGCGTAATGGACAA              GCGAGCC TGG GGCTCAC              ACTTGCCTTACTTGC  70 33
         frr 1805969 .. 1805995 - -15.9  -4.84918   CCCACAAAGACAAAA         GCGCCGTGCAG GGGCA CTACACGGCGC         TCGTAATATACCTGT 100 48
        uppS 1805148 .. 1805167 -  -3.4  -4.72007   TTTTAGCAAAAGAAA            CCTCTCTC TTGG GAGCGGGG             TTTAGCCGGTCTGTT  70 27
 JC965_08920 1804241 .. 1804272 -  -2.2  -3.07344   TGATTGGGTAACAGA      CTGATG-GAGCGGGA CGC TCCCGGGATCATCAG      TGCGCGAAACATCAA  42 37
        ispC 1803014 .. 1803028 -  -2.1  -2.78384   CTGGCTGCCACCACA              GTCCGT TCAT ACGG-C               AAGCTCCTTTATCAG  39 17
        rseP NONE
        bamA NONE
 JC965_08900 NONE
        lpxD NONE
        fabZ NONE
        lpxA NONE
        lpxB 1794986 .. 1795003 - -10.5  -4.41047   AGCCTTGAATCAAAA             CCGGCCC CGCA GGGCCAG              TGTCAGCACAATATC  88 60
        rnhB NONE
        dnaE 1790834 .. 1790844 -    -4  -3.39803   GACTCATAGGGACAA                 TAGA TCC TCTA                 ATCAAAAACCAATTC  50 23
        accA 1789837 .. 1789854 - -12.7  -5.60993   TCGCCCATAAAAAAA             GTCCCCG CATG CGGGGAC              TTTTTATTGGAAGCG 100 46
 JC965_08850 1785615 .. 1785630 - -11.8  -5.60993   GTGCCCATAAAAAAA              CCGCCC CGGN GGGCGG               CTTTCTCACAGGGAT 100 52
 JC965_08825 1779047 .. 1779080 - -15.5  -4.24623   GCAAATAGACACAAA     TGA-AAGAGGGAGGCC TGA AGCCTCCCTCTTGTCA     TGCACGGTGGTCGAC 100 47
 JC965_08815 1777232 .. 1777262 - -19.2  -2.87344   CACTCCCGCCAGACA       TGACAACGTCCCTC TTG AAGGGACGTTGTCA       TTTCATCAACCCGCA  93 59
 JC965_08780 1769299 .. 1769309 -  -8.2  -2.62184   CTTCGCGTCACAGGA                 GGGG GAT CCCC                 ATTACTGGGTGATAG  56 27
 JC965_08745 NONE
        feoB NONE
 JC965_08735 1761324 .. 1761341 - -11.3  -4.72272   GGCGGCCACGAAAAA             GGGAACC CTCG GGTTCCC              TTTTGCATATGGACA 100 45
 JC965_08720 1758845 .. 1758855 -  -4.6  -3.63515   CGGGATCCCCAAGAA                 GCGA GGC CCGC                 CGGGGGGCAGGCAGG  54 76
        btuC NONE
 JC965_08710 1756884 .. 1756910 - -15.2  -3.81027   CTCAACCAATTCAAA         GAGCCAGGTATC ACG GATGCCTGGCTC         TTTTCATTTCCACAG  95 178
 JC965_08700 1755211 .. 1755229 - -11.7  -4.72272   TCTGCGCAGCAAAAA             GCCCGTC GTGAT GACGGGC             TTTTTTATGTCAGGA 100 60
        dapB 1749655 .. 1749670 - -11.8  -5.35222   AAAAGTGACAAAAAA              CCCCGG CGGA CCGGGG               TTTGGCAAACAGTAC 100 69
        carA NONE
        carB 1744619 .. 1744638 - -12.1   -5.4833   GCAGGCAATAAAAAA            CCCCGCC GTTGCT GGCGGGG             TTTGCGTGCATCGAG 100 64
        leuA 1742399 .. 1742429 - -14.1  -5.24129   TTTTTCCATAAAAAA       CAATCCCCTCACC ATATG GGTCAGGGGATTG       TTGCAACCGGGACGG 100 111
 JC965_08655 1741237 .. 1741252 -  -2.4  -3.02043   AAGGCTTCCTGAAGA              GCGGGA CCTG CCCCTC               ATCGCGAATGAGAGG  41 139
 JC965_08650 1740018 .. 1740043 - -15.5    -4.431   GACGGAGGCATAAAA         CAAAGGCGGCC AATT GGCCGCCTTTA          TTATTTCTGCAAATC 100 39
 JC965_08630 1736221 .. 1736238 - -12.7  -3.10959   GAAGTGTAACAGATA             GGCGGCA GGAA TGCCGCC              TCAAATGGTCTGTAT  75 97
 JC965_08625 1734707 .. 1734721 - -12.8  -4.02334   CATCGACAGCACAAA               GGCGCC AGT GGCGCC               TTTGGAGAGTAAACG  89 73
 JC965_08620 1733980 .. 1733996 - -10.8  -5.60993   TTTGCCATAAAAAAA              CCCGGC GCAGG GCCGGG              TGACGGGATGAGAAG 100 47
 JC965_08615 1732698 .. 1732713 - -11.8  -5.40072   CCTCCGTCAAAAAAA              GGGGCC ATCC GGCCCC               TGTTTGCAACTCAAT 100 36
 JC965_08610 1732017 .. 1732028 -  -3.6  -3.55444   CCTTGACGGTGTAAA                CGAG TCGG CCCG                 GTGCATGGCATGGCT  52 244
 JC965_08600 1731364 .. 1731385 - -17.3  -3.64822   ACGCTGTCATGCAAA           CAGCCCCGC TCGT GCGGGGCTG            TTTTTTTATGCCTGG 100 56
 JC965_08585 1723776 .. 1723787 -    -3  -3.44991   TACAAACTGCAAAGA                GTTA TTGA TAAC                 TATATCTTTTTTCAA  48 128
 JC965_08580 NONE
 JC965_08575 NONE
 JC965_08570 1718538 .. 1718565 -   -15  -4.42386   GCCGGACGCATAAAA        GAATGACTGCAG CACG CTGCAGCCATTC         CCCTTGCCTGATATG 100 59
 JC965_08565 NONE
 JC965_08560 1715774 .. 1715790 - -10.8  -5.46276   AACAGATATAAAAAA              GGGCCC TTAAT GGGCCC              CTTTCTATCGAGTTG 100 47
 JC965_08555 1714490 .. 1714514 -  -4.9   -3.7511   GTCCCCAGAAGATAA          GCAGAGCCG TGAGGGC CAGCCCCGC          CCCCAGACTGATCCC  57 303
 JC965_08545 1713758 .. 1713771 -  -2.3  -3.09327   CCAGGGCATCGAAGA               TCACC ATTT GGGGA                AGACGTTGCAGCACG  42 101
 JC965_08540 1712756 .. 1712772 -  -5.1  -2.78715   AACGTTTGCACGATA              TCGGTTG CGC CAACTGA              CTGATTTGACACAAC  47 82
 JC965_08535 1711402 .. 1711417 - -11.8  -5.00884   AGCGGGTGCAAAAAA              GCCCGC CGAA GCGGGC               AATGACCGGAAGGTG 100 58
        glnK 1709271 .. 1709294 - -16.8  -5.27335   GCGGCCAAACAAAAA          GACCGGATGG AATC CCATCCGGTC           TTTCGACGACCACCC 100 104
 JC965_08515 1708111 .. 1708135 -  -9.9    -2.702   ATGAGTCCACAGAAG          TTGATGGGGCC GTT GGCCCCATCTG          ATTACAAGTCGAATT  62 27
 JC965_08510 NONE
 JC965_08505 1705389 .. 1705407 -  -2.2  -3.27951   GATTTCACGACAATA             CCACGCAC TCA GGGCAAGG             GGTCAAACAACACCA  44 15
 JC965_08500 1704353 .. 1704370 - -12.7  -4.84359   CGATCCGCACAAAAA             TCCCGGC CTTG GCCGGGA              TTTTTTGTTTTGAGC 100 57
 JC965_08490 NONE
 JC965_08485 NONE
        artQ NONE
        artM 1700779 .. 1700797 -  -9.6  -3.91689   ATAAATGAGAGGAAA             GACACAGA TTT CCTGTGTC             CTCCTCACCATTAAG  77 58
         mdh 1699615 .. 1699632 - -12.7    -4.208   CCCGAAAATGACAAA             GGGGAGC CTGG GCTCCCC              TTGTGGTCGACGTAG  93 45
 JC965_08465 1698608 .. 1698639 - -18.2  -2.59748   GACCGGGAGAATGCA      CAAGGCCCAC-AAGC ACA GCTTCGTGGGCCTTG      TAATATCAAAGCGGG  86 51
 JC965_08455 1696785 .. 1696801 - -13.7   -5.1101   CGAGGATTGAAAAAA              GGCTGCC AAT GGCAGCC              TTTTTGTTTCACTCG 100 34
         ffh 1692962 .. 1692979 - -11.3  -4.72986   GATTGGCATGAAAAA             GGCTCAC CAGG GTGAGCC              TTTCTACCTGACCAG 100 49
        rpsP 1692579 .. 1692592 -  -3.7  -3.14132   CGTTTGGCTGATTAA               GCAGC TTTG GCAGC                GTCTTTGATCAGCTT  46 8
        rimM 1692029 .. 1692039 -  -3.2  -3.54424   TGTTAGCGCGGGAAA                 CTAG AAA CCAG                 GATCCCAATCAACTT  50 15
        trmD NONE
        rplS 1690792 .. 1690810 -   -16  -5.37043   AGCGGATACAAAAAA             GGCTCGCC ATT GGCGAGCC             TTTTCACTACCTGTC 100 80
        rppH NONE
        ptsP 1686126 .. 1686138 -  -3.3  -3.39187   AAGACGGAATATCAA                TCGGG CAG CCTGA                CCTTGTGCCCAGCCC  48 9
         lgt NONE
        thyA 1684348 .. 1684377 - -10.7  -4.59081   TAAATTCACATAAAA       TGCAAAAGGCGCC CGCA GGCGCCTCTAACA        GCTGAGTGTCAATTC  93 85
        nhaA NONE
 JC965_08380 NONE
        nhaR NONE
 JC965_08370 1681278 .. 1681292 -  -8.5  -5.12707   TGAAAGCTGAAAAAA               CCGGC CTAGT GCCGG               TTTTTTATTTGGGGT  90 30
        murJ 1679065 .. 1679102 -  -3.4  -2.94099   TCGGCGGATTATATA  TCAG-GCAGCAGGCAGGG TCAG CCCTGCC-GTTGATCCGA   TTTAGCCATCCCGCC  42 154
        ribF NONE
        ileS NONE
        lspA NONE
        fkpB NONE
        ispH 1673219 .. 1673261 -  -9.8  -2.87132   CTGGCGGTTCATATA GTCTAATGCCGGATAGGTCG CAA CGACAAATCCGGCATCAGGA ACATAACTCTTTATT  63 62
        tppA NONE
        pilV NONE
 JC965_08320 NONE
        tppD 1670408 .. 1670423 -  -2.5  -3.26347   ACAGCTGAAACAAAC              TGCCC TACATT GGACA               AGGGGGGCTTTGACG  44 386
 JC965_08305 NONE
 JC965_08300 1665818 .. 1665828 -  -4.6  -3.93913   AAAGAGAAACGCAAA                 GCGG GGG CCAC                 ACCCAAAACCAATTA  59 93
 JC965_08285 1663674 .. 1663717 -  -5.2  -3.79906   GGACCCGGATAACAA GAGGCACAAACCCAACACCC CGCT GCGTGTTTTCATTGTGCCTC TCCTTCGTAGAGGTA  59 14
 JC965_08280 1663339 .. 1663358 -  -6.4  -3.72576   GTGTCGTTCAGGAAA            TGCCCAGA TAAA TCTGGTCA             TCTCTCCCTCCGGCC  62 92
 JC965_08270 NONE
        glnB NONE
 JC965_08260 1660160 .. 1660173 -  -8.1  -3.40522   ATTTGGTTACCAGAA               CCAGC CCCC GCTGG                AGAGCTGATCCTTGC  64 3
        luxS 1659580 .. 1659598 -   -16   -4.7173   CACCAGATGCAAAAA             GGCCGGTC ATT GACCGGCC             TTTTTCATGCTTCCC 100 50
 JC965_08200 NONE
 JC965_08195 NONE
 JC965_08190 NONE
 JC965_08185 NONE
 JC965_08180 NONE
 JC965_08175 NONE
 JC965_08170 NONE
 JC965_08165 NONE
 JC965_08160 NONE
 JC965_08155 NONE
 JC965_08150 NONE
 JC965_08145 NONE
 JC965_08140 NONE
 JC965_08135 NONE
 JC965_08130 NONE
 JC965_08125 NONE
 JC965_08120 1643294 .. 1643328 - -20.2  -4.05033   TGCACCCGACATAAA     TGTGTCCGGTCACG ATTCTGG CGTGACCGGACACA     ATTTCCTATCTCTGA 100 43
 JC965_08105 NONE
 JC965_08100 NONE
 JC965_08095 NONE
 JC965_08090 NONE
 JC965_08085 NONE
 JC965_08080 NONE
 JC965_08075 NONE
 JC965_08070 NONE
 JC965_08065 NONE
 JC965_08060 NONE
 JC965_08055 NONE
 JC965_08050 NONE
 JC965_08045 NONE
 JC965_08040 NONE
 JC965_08035 NONE
 JC965_08030 NONE
 JC965_08025 1629849 .. 1629859 -  -6.8  -2.62111   TCCTTAAAAAATGAT                 GGTC CAC GACC                 CGGTGATGGATAGGT  50 3
 JC965_08020 NONE
 JC965_08015 NONE
 JC965_08010 1627508 .. 1627520 -  -2.6   -4.0162   TGCTTACAGCACAAA                GGCC GGGCG AGCC                CCAATGCTCGTGCCC  54 1
 JC965_08005 1626952 .. 1626965 -  -8.1  -3.04144   GGTTGAGCGCGAACA               CGCCA GCAT TGGCG                CCGTTGTTCCAGTTG  58 96
 JC965_08000 NONE
 JC965_07995 NONE
 JC965_07990 NONE
 JC965_07985 NONE
 JC965_07980 NONE
 JC965_07975 NONE
 JC965_07970 NONE
 JC965_07965 1618752 .. 1618777 - -20.5  -3.93695   TTGATGATCGAGAAA         GGCGGCAGAGC GTTG GCTCTGCCGCC          TTTTGTTTTTGCTGC 100 43
 JC965_07955 1617870 .. 1617887 - -12.7  -5.06414   TCTGGTCAACAAAAA             GGGCACC TCGG GGTGCCC              TTTTTCGTTGCCGTC 100 47
        pepA 1613793 .. 1613818 - -16.3  -3.90291   ATTCTCTCAATGAAA         CAAGGAAGAGG CAGG CCTCTTCCTTG          TGATACAGGGTAACG 100 79
 JC965_07935 NONE
 JC965_07930 1610290 .. 1610308 - -13.1   -4.8048   CCCTGACATGAAAAA             GCCCCCG ATAAA CGGGGGC             TTGTCATGTTGCGCT 100 46
 JC965_07925 NONE
 JC965_07920 1608114 .. 1608133 - -12.8  -5.24531   ATTTTCCATAAAAAA            GGGCCGCC TGTG GGCGACCC             TGTGGTTTGTCTCAC 100 37
        pbpG 1607143 .. 1607158 -    -9   -5.4505   GCGGGCAATAAAAAA              GGATGC CGCG GCATCC               TTTCATGTCTTCGTT 100 48
 JC965_07850 1600091 .. 1600123 -    -4  -3.53012   GGGTTGGGCGGCAAA     CGGAGCA-CTGCCGA CGAG TCGGCCGGTGCACGG      CACTTGTTGCAATGG  50 75
 JC965_07845 NONE
 JC965_07840 NONE
 JC965_07835 1594706 .. 1594724 -   -16  -4.86822   AAGCAGACAACAAAA             CGGCGGGT TCA ACCCGCCG             TTTTTTTACTGCCCT 100 50
 JC965_07815 1588675 .. 1588694 -   -15   -3.4404   AGTCAGAGGTAAACA            CAGGGGGC CAAT GCCCCCTG             TTTTCTGGCATCACA  88 36
 JC965_07785 1582299 .. 1582334 -  -9.7  -3.78329   TGGGATGAATGCAAA    TGAGGGACCGTGCCCG GAAGG CGGGCACGG-CACTAA    CGGAGCGTGGCCGAG  75 57
 JC965_07780 1581424 .. 1581441 - -14.1  -5.27779   CGGAAGATGAAAAAA             GCCCCGC CAGT GCGGGGC              TTTTTGTCGTGGGGC 100 52
        nadK 1569314 .. 1569338 - -11.4  -3.53012   CTCGGCTGGTCGAAA          GCAGCGAGGG GTAGA CCCTCGCCAC          CGGTGTTGCCTGGCT  75 39
        recN 1566166 .. 1566198 -  -4.1  -4.19238   CGGTCAATCTGAAAA     GGCCGACATGGACG GGAGGG CATCC-CGTCCGCC      CCGTGGTCAGCTTGC  60 32
 JC965_07720 1565268 .. 1565288 - -16.9  -4.15703   CGTCAGAAACAAGAA            GACCCGCTC AGG GAGCGGGTC            TTGTGGTGTCAACCG 100 34
 JC965_07715 NONE
 JC965_07710 NONE
 JC965_07705 1560497 .. 1560538 - -10.9  -3.28712   GGTTTGTGGGCAGAA TGG-GTCGCGATTGACCTCC TCT GGATGTCCATCGCGATACCA CACTCTCTGCCAGGG  70 41
 JC965_07700 1559562 .. 1559592 - -15.4  -4.28361   GGAATCGCAGCAAAA       GCAGGCCGCTTCCC CGA GGGAAGAAGCCCGC       CAGTCACAAGATAAA 100 48
 JC965_07695 1557810 .. 1557828 - -11.7  -3.31144   TCCGGATCTCGATAA             TGCCGCC TGCAG GGCGGCA             TTATTATTTTCAGGG  74 454
        dsdA 1554499 .. 1554515 - -11.5  -4.91109   CTCGCAGCAGAAAAA              CCCGCCA GGT CGGCGGG              TCACGGGGGCGAAAA 100 46
 JC965_07675 1553976 .. 1553994 - -13.8  -4.35524   CGTTGAAATGCAAAA             CCGGCGCC ATG AGCGCCGG             TTTTTTTATGGAGGA  95 51
 JC965_07660 1549870 .. 1549889 -  -3.5  -2.88544   TGCCATCGCCATACA            TCGCCAT ACAAAA AGGGCGA             ATGTGGATGCTTATA  43 36
 JC965_07655 NONE
 JC965_07650 NONE
 JC965_07645 NONE
 JC965_07640 NONE
 JC965_07635 1544826 .. 1544853 -  -2.7  -4.24963   GATAAGGACTCAAAA        GGTAGACTAAA GACCTA CTGAGTCCACC         CGACAGCAATTGATG  61 477
 JC965_07625 1544372 .. 1544401 -  -5.7    -4.258   CCACTCACCAACAAA       TTGGGGAAAGG GAGCCCAT CCTCTCCCCAG        TGAATGGCGGGTGAT  69 40
 JC965_07585 NONE
 JC965_07580 1537630 .. 1537661 - -17.4  -4.28045   AGACCAGCAAAATAA      GCAGAAGGCGAACC CTGG GGTTCGCCTTCTGT       GTCTGTGCCTGGCGC 100 70
 JC965_07570 1535366 .. 1535378 -  -3.4  -3.10612   CCCAAGCTGAATATA                CACT TAAAG AGTG                CGGGTAAAACTGTAC  43 103
 JC965_07565 NONE
 JC965_07560 1533800 .. 1533831 - -11.4  -3.02511   GTTACCGGTGCAACA      CTCTGCGGGGGAGC GAGG GCTCCCCCGCCGTC       ATCCTAGCGGAACTC  70 29
 JC965_07555 1532978 .. 1532997 - -12.2  -5.93809   CCCCCATAAAAAAAA            CCCATGAC CGAA GTCATGGG             TAAAGGTGAAGACCC 100 55
 JC965_07550 1531797 .. 1531819 - -13.4  -3.02829   CAGACGTTGGGAAGA           GGCCCCGG TCATCCG CCGGGGCC           TGCACAGGGGGTTCA  77 115
 JC965_07545 NONE
        phrB NONE
 JC965_07535 NONE
 JC965_07530 NONE
 JC965_07525 NONE
 JC965_07520 1526211 .. 1526247 -  -3.6  -3.14132   TTCGGTTGGGATGAA   CCCGCACCATGG-GCTG CTGA CAACACCAGGAAGCGGA    ATTTAACGGGTGTGT  46 46
 JC965_07515 NONE
 JC965_07510 NONE
 JC965_07505 NONE
 JC965_07500 1523680 .. 1523699 -  -2.1  -3.19522   CCAGGCAAGACGCAA            CCAGGAA GAGAAT TTCATGG             AATACTCCATCAGGA  42 35
 JC965_07495 1523088 .. 1523099 -  -5.8   -3.7456   AGAAGCAGACTCAAA                GGAC AATC GTCC                 GTGCCTTACCGATCC  61 81
 JC965_07490 1522445 .. 1522463 - -13.8   -5.5762   ATCAAATAGAAAAAA             GCCGCCCA AAT CGGGCGGC             AAGCGGGTGGGAAAT 100 118
         hcp 1520608 .. 1520627 -   -15  -5.02476   ATAGCGTTGAAAAAA            GGCGAGCC ATCA GGCTCGCC             AAAGGCTTACAACAT 100 68
 JC965_07480 1519541 .. 1519552 -  -4.4  -3.25942   AGCTCGGGATACCAA                TGAC GCCC GTCA                 ATACTCCAGGCTCAC  49 23
        galE 1518288 .. 1518307 - -16.4  -5.14563   TTGTTCATGAAAAAA            CGCCCCGG CATG CCGGGGCG             TTTTGCTATTCAGGC 100 157
 JC965_07465 1517196 .. 1517220 - -14.4  -4.87626   CGCGAATACGAAAAA          GCCCAACTGA ATAAA TCAGTTGGGC          TATATAGATGGCGGA 100 34
 JC965_07450 1511109 .. 1511120 -  -5.8  -3.66497   CAACAAACCTTCAAA                GAGC GCAC GCTC                 TGGCGGAAATACCCC  58 525
 JC965_07425 1506128 .. 1506145 - -12.7  -5.38047   CACGGATACAAAAAA             CCGGAGC AGCT GCTCCGG              TTTTTTTATGCCCTC 100 82
 JC965_07390 1500124 .. 1500136 -  -9.1  -2.75844   GCCGCCACGCCAAAT                GGGGA AAA TCCCC                GCCCTATCACAAAAT  60 245
 JC965_07385 NONE
 JC965_07380 NONE
 JC965_07375 NONE
 JC965_07370 NONE
        nqrE NONE
        nqrF NONE
 JC965_07355 NONE
        nqrM 1492778 .. 1492801 - -18.2  -5.03994   TGCCACATATAAAAA          CGAGCCGACC CAGG GGTCGGCTCG           TTTCGTTGCAAGGCT 100 63
        dinB NONE
 JC965_07335 1488984 .. 1489008 - -10.1  -3.61398   CCTCTGCGGGAAGAA          GGGCTAAATCA GGT CGATTTAACCC          AGTCTGTCATCTGAA  72 88
 JC965_07330 NONE
 JC965_07325 NONE
 JC965_07320 NONE
        rlmM 1485652 .. 1485669 - -12.7  -5.76633   CCAGACACAAAAAAA             CCGGACG TCAC CGTCCGG              TTTTTTCATGCCCTG 100 55
        kdpA NONE
        kdpB 1476920 .. 1476953 -  -4.5  -3.63744   TCTTGCTCCAAAAGA     TTGATGGGGTACAAGC CAG GCCTGCACCCCG-CTA     TGTAGTCACACTAGG  54 31
 JC965_07275 1476366 .. 1476379 -  -9.5  -2.89447   CCCGAACGACAAGGA               GCGCC CTCA GGCGC                CCTTTTGATGATCGA  65 18
 JC965_07270 1473669 .. 1473691 -  -3.3  -4.18018   TTTGCTGATTGAAAA           GGGCGGC GACCATCAG GCCGCCG           GTGCGTTGAGGGCCA  58 15
 JC965_07265 1472865 .. 1472894 -   -10  -3.59979   TCGTTCCACGTGAAA       CATCAGCTGCCG ATAAAG CGGTAGCCGATG        CCGGCTTCAGTTTCG  72 90
 JC965_07255 1470761 .. 1470776 -  -4.7   -2.9155   CCCTGCAACAGGAGA              TGCTG GCCTTG CAGCA               GCAGGCCTCCCATGA  46 67
 JC965_07245 1469076 .. 1469097 - -15.9  -4.54047   CCACCTGATAGAAAA           GAGGCCTGC ATCT GCAGGCCTC            TTTTTTTCATGCCGA 100 49
 JC965_07230 1466670 .. 1466703 -  -7.3  -2.98942   AGGTGCCGAGACAGA     GCC-CCACGATCTGGG CTC CCCTGATCCGGGCGGC     AACCAGGGCATCGAG  56 396
 JC965_07200 NONE
 JC965_07195 1458121 .. 1458137 -  -3.6  -3.61398   GGCCTCCTTTAATAA              GCACGG TTCAG CCGCAC              TTCCAGCAGATGCTG  52 2
 JC965_07190 1457342 .. 1457356 - -12.8   -5.4505   TCCCTCAAGAAAAAA               GGCGGC CAG GCCGCC               AAAGAGAGAGCTATT 100 36
        rpmH NONE
        rnpA NONE
        yidD NONE
        yidC 1454688 .. 1454705 - -14.1  -5.46657   CATTGTAATAAAAAA             GGCGGCC CGAA GGCCGCC              TCTTTTGTCATCAGG 100 57
        mnmE 1453224 .. 1453242 - -13.1  -5.63504   AAGCGCACAAAAAAA             GCCCGGG ATGAA CCCGGGC             TTTTCATTGCCTGCT 100 49
        mioC 1444793 .. 1444828 - -14.8  -3.29511   GGGATCTGGGGATAA    CCAGGGAGATCGGG GGTCGTGA CCGGATCTCCCTGG     CCCTGATCAGCCGAT  86 32
        mnmG NONE
        rsmG NONE
 JC965_07120 NONE
 JC965_07115 1439881 .. 1439891 -  -6.8  -5.11033   CAGAACTGTAAAAAA                 TCGG GAT CCGA                 AGACCCCAGGTTCAC  86 188
 JC965_07110 NONE
        atpB NONE
        atpE NONE
        atpF NONE
        atpH NONE
        atpA NONE
        atpG NONE
        atpD NONE
        atpC 1432927 .. 1432942 - -10.4  -6.07627   ACGGGCAAAAAAAAA              GCGACC CGAA GGTCGC               TTTTTGCATCACCGT 100 43
        glmU 1431463 .. 1431482 - -16.4  -5.68023   CCATAAGCAAAAAAA            CCGGCGCC CTCG GGCGCCGG             TTTGCATTTCATTGA 100 48
 JC965_07040 1426025 .. 1426038 -  -3.7  -3.00525   TTTGTTCAAATCACA               CGGCC ACGG GGGCG                CAAATCAGCGTGATC  44 7
        glmS 1424087 .. 1424115 - -14.7  -4.07568   CCTGTTTTGCCAAAA        TAAAAAGAGCCGC AAT GCGGCTCTTTTTT        CATTTCCGGCGACGG 100 42
 JC965_07025 NONE
 JC965_07020 NONE
 JC965_07015 NONE
 JC965_07010 NONE
 JC965_07005 NONE
 JC965_07000 1417755 .. 1417766 -  -4.4  -4.07568   CGCTCGCCGGCAAAA                GTAG CAAG CTAC                 TTTCCCGCTGCCGCT  61 512
 JC965_06990 NONE
 JC965_06985 1415676 .. 1415699 - -18.2  -3.65046   TTCCTATCGCAACAA          CAAGGGCGCC ATCG GGCGCCCTTG           TTGTCATGGCCGGGT 100 44
 JC965_06965 1412246 .. 1412267 - -14.5   -4.3208   CTCGATAACGGAAAA           CGGCATGGA ATCC TCCATGCCG            TTTTTGTTTTCAGGG 100 53
        mepA NONE
 JC965_06945 NONE
 JC965_06940 NONE
 JC965_06935 1408156 .. 1408189 -  -6.7  -2.52543   ACGGGGCGTAATTTA     GGGGAAAG-GGCTGCC TGG GTCAACCACTTTTCCC     CTTATTTTTCATAAT  50 91
 JC965_06930 1407874 .. 1407889 - -10.4  -5.13473   ACCAGATGCAAAAAA              CCGACC CTTA GGTCGG               TTTTTACAATTTGGC 100 37
 JC965_06925 1407677 .. 1407710 - -24.1  -3.90318   CCATCATCGGATAAA     GTAAAAGGCCCCGTC TTGC GACGGGGCCTTTTAC      TTTATTTGGCGGTGA 100 32
 JC965_06920 NONE
 JC965_06915 1405427 .. 1405445 -   -16  -4.93877   TGGCAGGAAACAAAA             GACCCCGC ATG GCGGGGTC             TGTTTCAGGGTTGGA 100 30
 JC965_06910 NONE
 JC965_06905 NONE
        nuoC NONE
        nuoE NONE
        nuoF 1400255 .. 1400269 -  -2.8  -3.53091   ACCTGTTTTGTGAAA               TCGG CTATTGC CCGA               TGCGTCCTGGCGCTT  48 39
        nuoG 1397489 .. 1397505 -    -3  -2.82193   AGCAGATCCATCAGA             GAGTCGC TCAT GCGA-TC              ACCTCCTGCAGGTTA  41 16
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK NONE
        nuoL NONE
        nuoM NONE
        nuoN 1389981 .. 1389997 - -10.8  -5.36441   GGCGGACATAAAAAA              CCGGCC ACGGA GGCCGG              TTTCGCTGTGTGAAC 100 54
        mltF 1383903 .. 1383918 - -11.8  -5.66684   CAAGGCATAAAAAAA              CCCGGC TGAT GCCGGG               TTTATACTGTGTGCT 100 327
 JC965_06730 NONE
 JC965_06725 1362055 .. 1362071 -  -9.4  -4.72986   GATCCCCACGAAAAA              GGCCTC TTGAC GAGGCC              TTTTTGCTGTCTGGT  86 57
 JC965_06685 1354039 .. 1354069 - -10.3  -5.65177   AGAGGGATAAAAAAA       TCCCGGCGCCGTC GCACA GACAGGGCCGGGT       CATCAAACAAGGAAT 100 296
        ahpC 1353104 .. 1353127 - -15.3   -3.9122   GAGGGCCGTAAACAA          GACCGGCCC TTGAAC GGGCCGGTC           TTCAGAGCGGGGAGG  95 42
        ahpF 1351376 .. 1351393 - -11.3  -5.65177   ACAGGGATAAAAAAA             CCGACTC CAGG GAGTCGG              TTTTTTGTTGGGCGG 100 47
 JC965_06660 1349354 .. 1349364 -  -6.8  -2.79133   GAATTGCCCATCACA                 TCGC GCT GCGA                 TGATTTGTCGTATCC  51 10
 JC965_06650 1347568 .. 1347587 -    -5  -4.15006   ACATGGACGCGAAAA            GACATTGC AAAT GCAATCTC             CGCGATTGCACATAC  64 54
 JC965_06645 1347281 .. 1347293 -  -9.1  -3.29043   AAGTCCGCTGGAGAA                CGGGT CAG ACCCG                GTTGTTGACGCGCTC  65 17
 JC965_06640 NONE
 JC965_06635 NONE
 JC965_06630 NONE
 JC965_06625 NONE
 JC965_06620 1342610 .. 1342620 -  -6.8  -2.74012   CCAGCAGCGGAACTA                 TCCC CAG GGGA                 TAGCTCTATTGGCGG  51 77
 JC965_06615 NONE
 JC965_06610 1341004 .. 1341024 -  -3.8  -3.34398   GTGGTGGTTGAAATA            CCCGTGCC TCGTC GGCGCCGG            GCGCGTGCTGGGATG  48 51
 JC965_06605 1340334 .. 1340348 -  -4.2   -4.0274   GGTAGCAGCAAACAA               GCCG CATGCGC CGGC               GACCGCTTTCACGCC  59 213
 JC965_06600 1337990 .. 1338035 - -20.5  -3.21218   ACCGCTGACCACGAA GGGTCTCCGGGTGGCTCGCGCA GCT TG-GCAAGCCACCGGGGGACCC TTCGCAGAGGCGGGA 100 230
 JC965_06595 1335945 .. 1335961 -  -4.4  -3.85698   CGTGGGTTGGAGAAA             GGAGGCA TCGA TGCC-CC              GGTGGGCAGCGTTCG  57 177
 JC965_06590 1335266 .. 1335286 - -10.4  -5.09259   CACCGGAAAAGAAAA            GCCCCGCA TCGAG TACGGGGC            TGTCAGGAGGGTGCG 100 52
 JC965_06585 NONE
 JC965_06580 1334282 .. 1334317 - -12.7  -5.07486   GATGGGGAAGAAAAA    TTGAGGGACATG-GCC TTATG GGCGCATGTCCCTCAC    GGGGGGATCGAGAGG 100 64
 JC965_06575 1333493 .. 1333506 -  -3.7  -3.13919   TTGAAAGTGGAAAAT               GCGTC AGTC GGCGC                TGATCGTTGGCGTCT  46 15
 JC965_06570 1332604 .. 1332634 - -16.1  -2.77781   TCCTATGAAAATGGA       CCAGCCCGGCTCC GGGAG GGAGACGGGCCGG       TATGGGGGAGAACAA  82 69
 JC965_06565 1332276 .. 1332292 - -10.1  -5.18726   TGCGGACAAGAAAAA              GCCCCTC GAA AAGGGGC              TTGGTTGGGTCAGGC 100 35
 JC965_06560 1331107 .. 1331132 - -11.9   -5.5112   TGGATGAAGAAAAAA         GCCCTCCA-CCG AAA CGGATGGAAGGC         TTGTGGGGCAGTCGC 100 92
 JC965_06555 1330677 .. 1330693 -  -7.2  -4.64861   TCCGCCCAAAAGAAA              GCCCCC GAAAT GGGAGC              TTCAAGGGGTATGCG  79 53
 JC965_06550 1329406 .. 1329431 - -16.1  -4.89233   GAGGAATAGGAAAAA         GGCAAGGCCCC GTGA GGGGCCATGCC          GGATCAGAACGAAGC 100 29
 JC965_06545 1328665 .. 1328680 - -10.4  -3.71848   CGGGTGGATGAAGAA              CACCGC GGAT GCGGTG               TCTGCAATCACGCAG  77 33
 JC965_06540 1328192 .. 1328225 -  -8.1  -3.01745   TCCTGAAGAAGTAGA     GCCAGAGGC-CTCCCC GTG GGGAAGAACCCCCAGC     GGGTGATGGAATGCC  58 70
 JC965_06535 NONE
 JC965_06530 1327434 .. 1327468 -   -17  -2.74523   TGAGCGGGAACAGCA     CCGCCCGTCGGGGCAG GTA CTGCCCCGGGGGGGGG     GTGGAAGAAAACCGC  87 41
 JC965_06525 1326724 .. 1326749 - -13.3  -3.44848   GGCGGGGATGAAAGA         CGGAAGCACGC CGAG ACGTGCCTCCG          AGGGGGTCAAGCCGC  82 32
 JC965_06520 1325562 .. 1325577 -  -6.1  -2.62616   CGATGTGGTACAGCA              GGACG GCAGCG CGTCC               GGTGGATCAGCGGAT  48 32
 JC965_06515 1325157 .. 1325188 -  -9.4  -2.81133   CATTGAGCCACGACA      CCCCTGCCGGAG TGAAGTGG CTCCGTCAGGAG       AATGAGGATGACGAT  60 50
 JC965_06510 1324702 .. 1324740 - -19.7  -5.27335   TGCTCCAAAGAAAAA  GGGGCATG-CACCACCCC CAGC GGGGCAGTGGCATGCCCC   GTGGTGGGAAGTAAA 100 102
 JC965_06505 1322313 .. 1322351 - -23.2  -4.65895   CTTGGGATCGAAAAA   GCGCAGCCACGCCCACGG AGA CCGTGGACGTGGCTGCAA   GGTGGGAACAGCGGA 100 76
 JC965_06500 1321374 .. 1321389 - -11.8  -5.27335   CCCTCCAAAGAAAAA              GGCCCC CGAA GGGGCC               AATGAGAGCGCAGGT 100 55
 JC965_06495 NONE
 JC965_06490 1320029 .. 1320039 -  -6.8  -3.09516   GCTCCGATCAGGGAA                 TCGC CAC GCGA                 CGGATCTGTTCGCCG  54 7
 JC965_06485 NONE
 JC965_06480 NONE
 JC965_06475 NONE
        traD NONE
 JC965_06465 1315165 .. 1315179 -  -5.6  -2.62735   AGATCGTGGAGATCA               GGGCTG TTT CAGGCC               GCAAACAATAGGAAC  46 64
 JC965_06460 NONE
 JC965_06455 NONE
 JC965_06450 1314119 .. 1314143 -  -4.2  -2.98823   TGCTGCTCAGACATA         CCGGCCTCGCC TTAC AG-GATGCCGG          TGGCTTCGGTGAGCA  46 12
 JC965_06445 NONE
 JC965_06440 NONE
 JC965_06435 NONE
 JC965_06430 NONE
 JC965_06425 NONE
 JC965_06420 NONE
 JC965_06415 1306520 .. 1306531 -  -4.4  -4.51174   GGATGAGAATGAAAA                GATG CATC CATC                 ACCGCGATTGCGGTG  68 118
        radC 1305907 .. 1305924 - -12.7  -5.95539   GGTGAAATAAAAAAA             CGGAGGC CGAA GCCTCCG              CGAGGATCAATGAAG 100 52
 JC965_06405 1304399 .. 1304417 -  -9.6  -2.74461   TATCGACCTCCAAAC             TATACCCG TAA CGGGCATA             TTTTTCAAGATGGCG  63 132
 JC965_06400 NONE
 JC965_06395 NONE
 JC965_06390 NONE
 JC965_06385 1301200 .. 1301212 -  -5.5   -2.8806   AAAGGCGTGGAGACA                CAACG GCT CGTCG                GCGTGAGTGTGGACG  48 391
        radC 1297668 .. 1297688 -  -5.3  -3.72695   ATTCCCTCTAGGAAA            GGGCTGGTT TCA ATCAAGCCC            ATTGATTGATCCCCA  58 234
 JC965_06365 1294287 .. 1294318 - -13.6  -2.76263   TGCAGCAGCGAATGA      CGCGGCAAGGGTTG CTGC CTGCCCCTGCCGCG       CAGGGAAATCAGGCT  76 34
 JC965_06360 1291821 .. 1291846 - -23.3  -3.55444   CTTTGAGCCTTGAAA         CCGGGCGCGGC CACC GCCGCGCCCGG          ATTTTTGGCATTCAC 100 340
 JC965_06350 1290516 .. 1290526 -  -2.4  -4.07885   GAGGGCTGCGTAAAA                 GGAG GAA CACC                 TGAGCCCAGAGCCCG  57 297
 JC965_06320 1287499 .. 1287525 - -13.6  -3.15659   ACCGAAATAGACACA         GTGCGCCACCGC TTG GCGGTGGCCCTC         AATCGGTGATCGAGC  78 24
 JC965_06315 1286338 .. 1286362 -  -4.1  -3.15663   ATGTACCTCCATCAA          GCCCGGCCACA CAG CGCAGCCGGAT          GGAGGCAGTCTCAAG  46 58
 JC965_06310 NONE
 JC965_06305 1284862 .. 1284882 -  -3.9  -3.14132   TTTTTGGTTGAGCAA            GGCGACG ATCATGG CGTGGCC            CTCCAGCGTGGAAGA  46 306
 JC965_06300 NONE
 JC965_06295 NONE
 JC965_06290 1283415 .. 1283428 -  -2.3  -3.40403   TCGTGGTCATGACAA               TGCCC TCCC GGCCA                GCCAGGCGGCGTGCC  46 3
 JC965_06285 1282457 .. 1282489 -   -17  -3.53224   GACCCTCGCGCCAAA     CGCGGCACGGTGGCG AAGC CGCT-CCGTGCCGCG      TTCCCCCCATGTGCT  95 358
        hemL 1277201 .. 1277217 - -15.1  -5.68438   CGAGCAAACAAAAAA              GGGCCCC ATC GGGGCCC              TCTGCACATCTTGCG 100 46
 JC965_06260 1276050 .. 1276063 -  -5.3  -3.53811   GCCATGCTGGTCAAA               TCCAT GGAG ATGGA                GATGCTCAAATGGCT  55 187
 JC965_06245 1273549 .. 1273574 -  -5.5  -3.53307   AAGAAGGCCATAGAA         GCCTATCTCGAA CCC TTCGAG-TAGCC         GCCAACCGGGGCGGG  54 66
 JC965_06235 NONE
 JC965_06230 1271785 .. 1271808 - -13.8  -4.30576   GTTTGACCATGAAAA          GGCCGCCCTG GGAA CAGGGCGGCT           TTTTTCATGGGGTTG  95 50
        thpR NONE
        sfsA 1264831 .. 1264845 -  -7.1  -2.52464   CTGTCTCCTAATTCA               GCACG CTACC CGTGC               CATCCATAAATTGAG  50 112
        dksA 1264322 .. 1264337 - -10.4   -5.4756   AAGCTCAATAAAAAA              GGGAGC CTGG GCTCCC               TTTTCGTTCCTGTGG 100 51
      gluQRS 1263341 .. 1263355 -  -2.1  -3.08812   TTTGGGGCAAGAAAT              GC-AGC CGGG GCTAGC               TTTGCCCTTGCGGGA  42 21
        pcnB NONE
        folK NONE
        panB NONE
        panC NONE
 JC965_06170 1259080 .. 1259095 - -11.8   -4.7254   ACCCGCCAGCAAAAA              GGCGCC CTCG GGCGCC               TTTTTATTTGCACAT 100 48
 JC965_06150 1255861 .. 1255890 - -26.5  -5.26316   GGAGCGGACAAAAAA       GCGGCGCCGGGCT GTAA AGCCCGGCGCCGC        TTTGTCAACATCTGC 100 46
         ppa 1253060 .. 1253075 - -11.8  -5.52023   ACGACCAATAAAAAA              GGCGCC ATAA GGCGCC               TTTTTTGCGAGAAAT 100 45
 JC965_06125 1251644 .. 1251659 -  -4.6  -3.02511   GTGATCTTGTCAACA              TGGGCG CCAT CCCCCA               ATGATGGCGGCAAGG  46 83
 JC965_06120 1250942 .. 1250958 - -11.5   -3.5394   AAACCCTTGTGGAAA              GGGCGCC ATC AGCGCCC              TTCTCTCTGATTCAG  75 37
 JC965_06115 NONE
 JC965_06110 NONE
 JC965_06105 1249259 .. 1249273 -  -3.5  -2.87051   GTTTCAGCATGAAAG               CCTCC GCAGT GAAGG               GGAGATGGCCGGACG  43 64
 JC965_06100 NONE
 JC965_06095 1247470 .. 1247489 - -13.6    -5.626   CACGGGATAAAAAAA            TGGCCTCC CGGG GGAGGCCA             TCAGGGGCTCACTCT 100 34
 JC965_06090 1246396 .. 1246408 -  -4.7  -4.07568   CTTTTTCGCTCAAAA                CCCGC AGA GGGGG                GAACATGGCCCGGGC  61 145
 JC965_06085 1244582 .. 1244612 - -14.7  -3.70674   GCACCACCCAAAAGA      GGGGCCCGCTGCCG GTGA CGGCAG-GGGCCCG       TTTTTATTGTTAGCG  91 75
 JC965_06080 1243254 .. 1243288 -  -9.9   -4.4715   CTTGAATGGATAAAA     GGGCTGAGGAGGCGT AGTGA AAACCGCCCCAGCCC     GGCTTTTATTGGTTC  84 61
 JC965_06075 1242181 .. 1242191 -  -3.2  -3.41878   TGCGCTAACCCACAA                 CCAC CAC GTGA                 CCGTCCCTGAGTTTC  48 58
 JC965_06070 1240747 .. 1240758 -  -4.4  -4.16943   CGCCAGAGGTTAAAA                CACA GTTG TGTG                 TTCTTTAGCGTAGAG  61 30
 JC965_06065 1239730 .. 1239745 -    -6  -4.10791   AATATTGATAAATAA              GGGGGC GTTT GCCCTC               TTGTTTATTGTCTTC  66 183
 JC965_06035 NONE
 JC965_06030 1231506 .. 1231533 - -25.6  -4.66609   CACCTCATTGAAAAA        CGGGCCCGGCGC ACTC GCGCCGGGCCCG         TTTTTTTATGGCCAT 100 58
        rdgB 1227736 .. 1227754 - -13.8  -3.90112   GCGCCGCGAACGAAA             CGGGGGCC GAC GGCCCCCA             TTGTAGATGACAACG  93 58
        hemW 1226424 .. 1226452 - -23.3  -3.10975   AGGCATCAGCTAACA        CAATCAGGGCGCC AAT GGCGCCCTGATTG        TTTTTCTATTCGCTG 100 82
        purH 1223049 .. 1223073 - -17.1  -2.60496   TCCGGTGCTAAAGAG          GCAGGGCCGCC ATC GGCGGCCCTGG          GCTGTCAGTGACGGA  86 30
        purD 1221645 .. 1221658 -  -9.5   -5.7946   CGTGCAACAAAAAAA               GGGCC CGCA GGCCC                TTTGAGTGATCGGGA 100 49
 JC965_05975 NONE
 JC965_05970 1220341 .. 1220358 - -14.1  -3.15574   CGAAGGGGATGAACA             GGGGCCC CGCA GGGCCCC              GTGAACGTTCAGACG  81 34
 JC965_05965 1217456 .. 1217480 - -22.9  -4.72272   TGGGGCCATGAAAAA          GGCCTCCCGCC GAT GGCGGGAGGCC          TGGTTCGGCGCCGGG 100 69
 JC965_05960 1216871 .. 1216888 - -12.7  -4.04206   CCATTTTCAGACAAA             GCCGCTC TTTT GAGCGGC              TTTGTCGTTTCTGGC  91 43
 JC965_05950 1215303 .. 1215313 -  -8.2  -3.31157   TAATCAGCATAGTAA                 CGCC TTT GGCG                 TCAGGAAGATAACCC  62 26
 JC965_05945 NONE
 JC965_05940 1214231 .. 1214247 - -10.9  -2.88292   ATAAAGATTATTATA              GGTGACA AAA TGTCACC              CTCTTGTGCCGAAGG  66 341
 JC965_05930 NONE
 JC965_05925 1211123 .. 1211143 -  -3.2  -2.94329   TATCCGTAACCAAAC           GCCAAGAGC TCTT GCACT-GGC            TCTAGCACTTAGTGA  42 183
 JC965_05920 1210580 .. 1210597 -  -6.9  -3.53012   GCCTTGCTGGTCAAA             CGTCGGC TGGC GCTGACG              CTGATTGGCAGCGCG  58 394
 JC965_05900 1205192 .. 1205203 -  -4.4  -3.22388   CATTGAACTGATGAA                TCGA CAGG TCGA                 TGTGCTGGTGGGATG  49 248
 JC965_05895 1204411 .. 1204440 - -19.5  -3.68351   TGGCGAGGATGGAAA       CAACAAAGGCTCC CGCG GGAGCCTTTGTTG        TTGCTGGGAACTCCC 100 257
 JC965_05885 1202541 .. 1202558 -  -9.8  -5.28176   GGCAGGCAGAAAAAA             GGGCCC GGGAGA GGGCCC              AAACATTGGAAACCC 100 91
 JC965_05880 NONE
 JC965_05875 1200760 .. 1200779 -  -4.2  -3.57144   GCCCTGACCGTCAAA            CTGGCGAC GGCT GTCTCCAA             TCAACCTGCAAAATT  53 292
 JC965_05850 1194698 .. 1194717 -  -4.2  -3.63694   ACCCAGCTCGAACAA            CCCGCCTT TGCC AAGGCCGA             CGTGCTGGTGATCTC  53 246
 JC965_05835 1191085 .. 1191095 -  -6.8  -2.64616   TTGCGATGGACACCA                 TGGC CGT GCCA                 TGGTCGTGAGCATCA  50 38
        rimI 1190253 .. 1190264 -  -7.2  -3.06133   GAAGGTGCGACTCAA                CCCG GATG CGGG                 GGATGGCAGCGAGCA  54 345
 JC965_05820 1187958 .. 1187974 - -13.7  -4.72986   GACGCCCAGCAAAAA              GCCGCTC CAT GAGCGGC              TTTTTCATATCAGGC 100 48
 JC965_05795 1182861 .. 1182875 -    -7  -3.32022   GGCGGCAGACATGAA               GGCTCC TCG GGTGCC               AGGGTCAATGACTAT  56 37
 JC965_05790 1182401 .. 1182417 -  -9.3  -3.11192   GATAGCATCACTGAA              GGCCGGG CCC CCTGGCC              GAGAAGGGGCAGTCC  63 1
 JC965_05785 1180505 .. 1180532 -  -7.7  -3.06696   GCTTGTTGTAACACA        CCTGCCAGG-GC GGCAT GCACCTGCCAGG        GCGGCATGCACCTGC  57 106
 JC965_05765 1175625 .. 1175641 - -11.5  -4.40003   CGGCATAAACAGAAA              GGGGCCA TGT CGGCCCC              TTTTTGTCAGCTCCC  91 32
 JC965_05750 1172478 .. 1172505 - -12.1  -3.17075   CCTCCCCGAAGGCAA        CAAAGCAGGCA TCCCGG CGCCTGCTTTG         TTGTTTTTGCGTTCC  74 47
 JC965_05745 1171685 .. 1171704 - -13.6  -3.94067   TAGCAGAGACAAGAA            GAGGAGGC CCTG GCCTCCTC             TTGCTTTTGGTGCAT  93 62
 JC965_05725 1169132 .. 1169159 -   -12  -4.18018   GTGCGCCAGGGAAAA        CGGGCCCACC TTAGGGGG GATGGGCCCG         TTGTGCAAGCCGCCT  87 133
 JC965_05720 NONE
        chrA 1167284 .. 1167312 -  -4.3  -3.21276   CCCTCGGGGATAAGA        GCCATGACCGCCA GCC CGGCGGGCGCTGC        CTGACTTGTCGCGGG  47 45
 JC965_05710 1166267 .. 1166298 - -15.8  -2.62616   TGATCCCCGACACGA      CCAGCGGCGCCTCC CTTC GGAGGCGCCGCTTT       TTTATCTCCCCCTGT  82 52
         gap 1157833 .. 1157849 - -15.1   -5.1523   TTCAGAATACAAAAA              GGCGGCC ATT GGCCGCC              TTTTTTCAAGCTACG 100 58
 JC965_05680 1156870 .. 1156891 - -15.9  -3.76641   ATGGCAAGATGCAAA           GAGGGCTCC CGCG GGAGCCCTC            TTTATTTATCCGTCA 100 50
 JC965_05525 1137215 .. 1137233 -  -2.2  -5.05782   ACCGATGGCAAAAAA             CGACCCCG TGC CCGGCCCG             AAGAAGCCGTCATAA  75 337
 JC965_05500 1133857 .. 1133869 -  -4.8  -3.15861   AATGGACAAGAGACA                GAGG GTACA CCTC                TTTTGCCCAGAGTCT  47 46
 JC965_05495 1131946 .. 1131977 -  -5.8  -3.56727   GGTAAGGAAGGACAA      GAGGCAGGGAGTAT ATCC AAACTCCCTCCGTC       TTCCCAACGTCGCCG  58 42
 JC965_05490 1131129 .. 1131150 -   -13  -5.60993   TTTGCCATAAAAAAA           GCCCGCAC GACAAG GTGCGGGC            GGAAGGATGCGCCGG 100 43
 JC965_05485 NONE
 JC965_05480 NONE
 JC965_05475 1130446 .. 1130461 -  -7.6  -4.62783   GAGGGATCGGAAAAA              CACACA TTAT TGTGTG               CAAGCAACAGATGCT  79 85
 JC965_05470 NONE
        yjjG 1128125 .. 1128148 - -16.8   -3.6502   GACGCCGGATGCAAA          CAAGGCAGCC CATG GGCTGCCTTG           TTTTTTTACATCCTT  95 55
        cmoM 1121788 .. 1121812 -  -9.2  -2.87132   TGCCGTGGTGATATA         GGCCGGGGTCG GTGG CG-CCCCGGCG          GCTGGATCCCGCATC  60 60
        mukF NONE
        mukE 1119668 .. 1119690 -  -3.4  -3.73402   ACACTCTCCATCAAA           CCGGCA GACACCATCAG TGCCGG           CACATTAACGTTGCA  53 30
        mukB 1115162 .. 1115181 -   -15  -4.18197   ATTTCCCATGGAAAA            CGGGAGGC CCAA GCCTCCCG             TTTTGCGTATCGCTC 100 66
 JC965_05420 1114566 .. 1114592 -  -5.9  -4.16943   TGGCACACCGGAAAA        TGG-GAAATCGC GTTG GCGACCTCACCA         ATGGAATGAAGAAGA  66 118
 JC965_05415 1113917 .. 1113937 -  -9.7  -3.02511   CTCATTGCCCGAAGA            GGCACCC TAGTAGG GGGTGCC            ATCCTTGTGTCTGGC  65 11
 JC965_05410 1113289 .. 1113303 -  -7.2  -3.29829   TATAGGGGGGCAGAA               TGAACA CTG TGTTCA               ACGGGGTGGATAACC  59 143
 JC965_05405 1112811 .. 1112833 - -11.3  -4.74103   GGCTGAAGGCAAAAA           GCCCGATGA GGGGA CCATCGGGC           TCTGCGGCAAGGATC 100 39
 JC965_05400 1111961 .. 1111978 - -12.7  -3.45023   TCACCATCACGACAA             GGGGAGC CGCG GCTCCCC              TTGTCGTTTCTGCAT  79 60
 JC965_05385 1109397 .. 1109410 -  -9.5  -4.37527   TGACAACCATTAAAA               CCGCC TGAT GGCGG                TTTTTTCATTACTGC  84 6
 JC965_05375 1106934 .. 1106961 -  -3.4  -4.07568   TCCTTGTCTTGAAAA        TGTCAGGGCG AGCATAGG CATCCTGACA         ACTAAATTCACGACA  58 162
 JC965_05360 NONE
 JC965_05355 NONE
 JC965_05350 1103604 .. 1103623 - -10.7  -5.63504   AACGCCATAAAAAAA            CCACCGC CAGCTT GCGGTGG             TTTTTTTATGGCGCC 100 50
        prmB NONE
        aroC 1100869 .. 1100886 - -12.7  -4.88129   AAAAACCATGAAAAA             GGCGACC CTGG GGTCGCC              TTGTGGTATCTGGTG 100 66
 JC965_05320 1098028 .. 1098048 - -18.3  -5.67967   ACCAGGACAAAAAAA            GCCCCGCCA GAT TGGCGGGGC            TTTTTGTATCAACCG 100 71
        fruB NONE
        pfkB NONE
        fruA 1089709 .. 1089726 - -14.1  -4.44667   CCCCTCAACAAGAAA             GGCGGCC CCAG GGCCGCC              TTGTCATGAAGGGTG 100 59
        mltA 1088027 .. 1088048 - -17.3  -5.27335   CCCCGCAAACAAAAA           GCCGCCGGA TTGC TCCGGCGGC            TTTTTTCATGGGAAT 100 101
        gyrA 1079157 .. 1079177 - -12.6  -5.61596   AGGCGGACAAAAAAA            GAGCGACC ATCAA GGTCGCTC            TTTTGCACCGGACAA 100 51
 JC965_05240 1078509 .. 1078520 -  -5.8  -3.86015   TATCCCGGCCAGAAA                GAGG CGAT CCTC                 AACCAGCTGCGGGCA  62 230
 JC965_05230 1076550 .. 1076568 -  -7.4  -3.35438   TATCAGACGCGACAA             CCCAGACA AGC TGTCTTGG             CGATTTTGCATACCG  59 355
        thrS NONE
        infC 1073821 .. 1073831 -  -6.8  -4.79352   TGAGTGACAACAAAA                 TCGC AAG GCGA                 ACCGACTCATGGGGC  79 70
        rpmI NONE
        rplT 1073181 .. 1073196 - -10.4  -5.52023   ATGAGCAACAAAAAA              GGAGGC CTGA GCCTCC               TTTATTTTTATAACA 100 49
        pheS NONE
        pheT 1069421 .. 1069431 -  -3.2    -3.322   AGCGCCATAGATCAA                 TCCC TCA AGGA                 TGCATTCAACTCTTC  46 11
        ihfA 1069093 .. 1069110 - -12.7   -4.2803   CATCGGAATGGAAAA             GCCAGGC GATT GCCTGGC              TTTTTGTCACTCGTT  93 32
 JC965_05185 NONE
 JC965_05180 NONE
 JC965_05175 1063250 .. 1063264 -  -4.2  -3.19117   AGCACAGGAGCAAGA               GGCG GCCCATT CGCC               CTTGGTCTTAGGCCG  47 33
        cobB NONE
 JC965_05165 1061753 .. 1061776 -    -8  -4.28375   GCAATACATTCAAAA          CCAGCGGGGC TGAC GCCCCGGCGA           AATTCCCCTCCCACC  77 110
 JC965_05145 1056629 .. 1056639 -  -2.4  -2.83012   AAGTGGAGCATCAGA                 GCAG TTC CAGC                 AGGGCTTGCAGCGGG  39 10
 JC965_05140 1056098 .. 1056117 -  -9.3  -6.17184   AGGAGCAAAAAAAAA            GATGCCC ACGCCG GGGCATC             TTGCATCGAGATTGA 100 44
 JC965_05135 1055417 .. 1055437 -  -3.1  -4.87626   GCGGAATAGCAAAAA            GGCGGCGAT TAT AGCGCCACT            TTGTTCTGCTGTCTT  74 136
 JC965_05130 1053428 .. 1053445 -  -9.1  -5.46276   AACAGACACAAAAAA             GCCGCTC CATG GAGCGAC              CTTCTCATCAGTGCA 100 49
 JC965_05125 NONE
 JC965_05120 NONE
 JC965_05115 1049534 .. 1049557 -  -2.2  -3.28712   CTCCTCGTGGTAGAA          GGGCTCCCGC CAGG ACACGGGCCC           CATGCGCACAGCCTA  44 85
 JC965_05110 1048281 .. 1048298 - -12.7  -4.65446   AGCAGACAGACAAAA             GGCGACC CCTG GGTCGCC              TTTCTTGTCTTGCAC  95 46
 JC965_05095 NONE
 JC965_05090 1042903 .. 1042926 - -16.8  -5.41143   TACCCGCGAAAAAAA          TGCCAGTCGG TTCG CCGACTGGCA           TTTTTTATTCCTGAC 100 80
 JC965_05080 1041352 .. 1041391 - -12.2  -3.83998   GCAGGCCATAGCAAA  GCGGCACAATGTCGGTCA GTTA TGACAAATATTGCGCCGC   TTGAACAGCCCGCAT  83 55
 JC965_05075 NONE
 JC965_05070 1040116 .. 1040135 - -13.6   -5.4756   AAGGGGAATAAAAAA            GATGGCCC GTCA GGGCCATC             ATGATGGCGTCAGCG 100 35
 JC965_05065 NONE
 JC965_05060 NONE
 JC965_05055 NONE
 JC965_05050 1035045 .. 1035065 -    -6  -3.82084   GTTGAAGAGGAACAA            GGCGGAGG ACCCG CACCCGCC            AGCAGCAGGACGCTC  61 188
        emrD 1033728 .. 1033746 - -13.1  -4.75372   AGGAGGCAGTAAAAA             GCCCGCC AACGG GGCGGGC             TCTTGGCCGTGTCAG 100 37
 JC965_05030 1032302 .. 1032327 - -13.4  -3.63744   CCCCCTTGTAAAACA         GAAAGAGCGC CGTGAT GCGCTCTTTC          ATTGACCCGGTGGAC  84 48
        ubiH 1030883 .. 1030894 -  -7.2  -2.62616   GGATCTGCGAGACGA                CGCC CACA GGCG                 TGCCTCTTGCTCGAA  53 69
 JC965_05020 1029466 .. 1029479 -  -5.2  -4.37991   TAAAAACAGCCAAAA               CCGC GCCATT GCGG                GATTTAATGTTGATT  70 163
        gcvT 1028101 .. 1028133 -  -6.2  -5.06414   TCGCTTCAACAAAAA     TG-GGGCGGCGAAGG TCAA CCCTCGCCGCAATCA      ATGATTACACCAACG  86 30
        gcvH 1027640 .. 1027664 - -14.3  -3.33525   GGCAGTCATACAAGA          GGGCCCTGC TGTGTTG GCAGGGCCC          GGGGGCATTACTCTT  83 33
        gcvP 1024503 .. 1024528 - -19.1  -3.58726   GGGCGCCACACACAA         CAAGGCCACCC CTGG GGGTGGCCTTG          TGCATATTGGCTGTC 100 60
 JC965_04985 1021707 .. 1021729 -  -9.2  -2.53894   ATGATGACGAGCAAT           CGGCATATTC AAT GAATATGCAG           TGTGGTTGGAAAATC  58 135
 JC965_04980 1020145 .. 1020160 -  -4.8  -3.07622   AGATATTTCATTTAA              CATAAT ATAC ATTATG               CGCGGTGTCGAATTT  47 128
 JC965_04975 1018081 .. 1018094 -  -5.9  -3.07113   GATCACTTCATTTAA               CGGCC AAGC AGCCG                GTCCAGCAGGCTGCG  52 8
        fabA 1017384 .. 1017410 - -15.2   -4.4767   TCACTCATTACAAAA         GGAAAGGGGCCA TCG TGGCCCCTTTAC         GTTGTCTCTGCTCAC 100 53
 JC965_04895 NONE
        ccoN NONE
        ccoO NONE
 JC965_04880 NONE
        ccoP  993465 ..  993496 - -20.4  -3.27784   AGCCAACACAAGATA      GCAAAAAGCCTCGA AGAG TCGAGGCTTTTTGC       TGATTAATCACGTGC 100 51
 JC965_04870  992881 ..  992911 -  -9.7  -2.57132   CGGGTCGGGGAGAAG      GGC-GGCTGACCGG CGTG CCGATCACCCTGCC       TTCGTGATTCAACGT  62 34
        cadA  990399 ..  990439 -  -5.9  -3.05715   AACCCGGCGAGGCAA  GAGGTGCCGCCACCCGGGA GGA TGCCAGATGGCTGCTCACC  GGTTGAGCCGCATGG  52 21
        ccoS NONE
 JC965_04855  989482 ..  989492 -  -3.2  -4.09243   GATAGGGTTTCAAAA                 GGAC GCC ATCC                 CGATCCAGAGGGTGT  58 9
 JC965_04850  988536 ..  988549 -  -2.3  -4.72272   CCTCCTTAGCAAAAA               GGCCA ATGA TGGCA                ACTCTTTAGCTATTA  69 128
        uspE  987523 ..  987533 -    -4  -4.84017   AACCCGGGACAAAAA                 TAAG CGG CTTA                 TTATAGCCATGTCCC  72 60
        ttcA  986555 ..  986571 - -13.7  -5.32944   GCCAGAATGAAAAAA              GGAGCGC CTG GCGCTCC              TTTTTTGTGGGTGAC 100 46
        dbpA  981049 ..  981069 - -16.9    -3.889   GCGAATGATATGAAA            CAGGCGCCT GTC AGGCGCCTG            TGGTCTGGCCGGGCG 100 52
 JC965_04810  980570 ..  980588 -  -3.1  -3.60098   ATCGGGGATTTCAAA             CGTTATC TGGCG GATCACG             TCTTCAGCGAGCTTC  51 157
 JC965_04800  978456 ..  978475 -   -15   -4.4078   GTTTGGCAATGAAAA            GGGCTCCC GAAC GGGAGCCC             TTTTTGTTGATGTGT 100 188
 JC965_04790  975982 ..  976003 -  -6.5  -3.86346   GGAGTCGGTGAGAAA           CGCTATCCC AGCA GGGAGAGCA            CGTTGGCGATCTTGT  63 6
 JC965_04785  974212 ..  974224 -  -2.6  -2.94099   CGGCGGGATCAGAGA                CCAC GGATA GCGG                CTCCCAGTGCCTTGA  41 6
        menH NONE
        menB NONE
        menC NONE
        menE  970209 ..  970226 - -12.7  -5.23765   CAAACAACATAAAAA             CAGCCCC AAAG GGGGCTG              TGTTGATAGCAAGGA 100 64
 JC965_04760  967298 ..  967323 - -16.9   -3.8709   AAACGGCGCCATAAA         CAAGGGGCGAC CATG GCCGCCCCTTG          TCATAGCCGTCTCGT 100 43
 JC965_04755  966241 ..  966264 - -18.2  -3.74693   TTTCACCTGATGAAA          GAGACCCGCC TGTT GGCGGGTCTC           TGCTATTGAGGGGTC 100 28
 JC965_04740 NONE
 JC965_04735  963179 ..  963202 -  -5.8  -3.92542   GGCAGCGTCAAAGAA          TGGGGGCCCA CTTG CGGGCCCCTT           TTTCATGCCGGTTAC  64 37
 JC965_04715 NONE
 JC965_04710  958510 ..  958530 -   -14   -4.7497   CTGATGGATGAAAAA            GAGCGGGC GTGGT GCCCGCTC            CTTCGTCGATTGACT 100 40
 JC965_04705  957758 ..  957776 -   -16  -3.95435   GGCCGGAAAAGAGAA             CGCCCCGA TCA TCGGGGCG             TTTTGCAGGGTGTCA 100 56
 JC965_04695  955665 ..  955686 - -10.1  -3.53012   TCTTTGGGCGTTAAA           GGTAAGGGG TTGC CCCCTTGCC            ACGGGGCTGGCAGGC  70 53
 JC965_04670 NONE
 JC965_04665  951265 ..  951283 - -14.6  -5.10461   GGCAGGCAACAAAAA             GGGCTCCA GCA TGGAGCCC             TTTTTCATGGTGGCG 100 43
 JC965_04650  946735 ..  946755 - -18.3  -3.09987   GCAACATCCATCGAA            CGCGCAGCC CAA GGCTGCGCG            TTCTTCATTCTGGAT  90 280
 JC965_04580  934072 ..  934083 -  -5.8   -3.3482   GAACGGCTCAAGGAA                CTGC GCCA GCAG                 TGCAAGACCGACCGC  52 141
 JC965_04555  931581 ..  931594 -  -2.3  -2.71144   GATGTTCCTCAACTA               CGACC TGCT GGCCA                AGCGCTGGGTTCGGT  39 393
 JC965_04530  926932 ..  926955 -    -3  -3.00525   CTGGCCGAAAGGATA          GGCCTCACGG GACG CGGTAAGGGC           TGTTTCGCACCAAGG  42 41
 JC965_04515 NONE
 JC965_04510  923338 ..  923355 -  -2.5  -4.08064   AAGGTGGTGGGAAAA             CCCCGCG TCGT CGCTGTG              GCCACTCCGACATCC  56 283
 JC965_04500 NONE
 JC965_04495 NONE
 JC965_04490 NONE
 JC965_04485  915302 ..  915324 -  -3.4  -4.72986   GACTCTCATGAAAAA           CTCCTTGAAT GAG ATTGATGGAG           TCACTGTAGGGCTTC  70 221
 JC965_04480 NONE
 JC965_04475  914243 ..  914267 -  -6.9  -2.78384   GGCTGGGGCAGCATA          TCGCCGCCGTG GTG CGCGGTGGCGG          CGTATCTTGGGAGCT  49 78
 JC965_04420 NONE
 JC965_04415 NONE
 JC965_04410  903877 ..  903894 - -10.5  -3.30701   GCGTAGCAAACCCAA             GGCAGCC TGAC GGCCGCC              TACCGCGCCCCGCCC  70 89
 JC965_04390  898306 ..  898321 - -11.8  -3.14132   GCTGGCTGTGACGAA              GGGGGC TTCG GCCCCC               TTTTTGCTGCGCATC  74 76
 JC965_04380  896146 ..  896176 -  -4.8  -2.87132   TCCTCTTGGCAGACA      TAGGCTCTTCCCT GGCAAA AGGGA-GAGCGTA       TCAAAGGTTGTTAAA  44 149
 JC965_04375  895491 ..  895510 -   -15  -3.86776   TAAGGAATGAGGAAA            GGCCGGGT TGAT ACCCGGCC             TTGTTGTTTATGGCG  95 361
 JC965_04355  893187 ..  893210 - -13.2  -2.74122   GGGGAGGAGAAATAG          CATCCCCGCA CGGA TACGGGGATG           GGAGAGATGGGGAGA  74 50
        mutS  890353 ..  890372 - -13.6  -4.05788   TTCGGTCAAACGAAA            GGGGAACC TCGC GGTTCCCC             TTTTTCATGCCTGTT  95 54
 JC965_04335  887389 ..  887399 -  -4.6  -3.72695   AGTTGCTGTAGCAAA                 GCCC GTA GGAC                 CTGGTGTAGACGAGG  57 178
        folB  884612 ..  884624 -  -3.4  -2.93382   TCCCAGACTGATATA                GATG CGGGT CATC                AGTTGGCGCTCGCAG  42 24
        folK  884086 ..  884109 -  -8.9  -3.18582   CAGCGGAGTCATCAA          CAAGGACAC CCGAGT GTGCCCTTG           TTGTTCAGTGATGCT  63 30
 JC965_04290  883024 ..  883060 -  -7.9  -3.14132   CTTCTCCCCGAGCAA    GGCGGGGATGACCATGA TCC CCACGGTGATCGGCGCC    ATGCTGACCAAGACG  56 479
 JC965_04265  877695 ..  877713 -  -6.7  -3.05022   GGCGGGAGAGATACA            GGT-CGCC GCCG GGCGCACC             GCCCAGGGCTAGGCC  53 34
 JC965_04245  868587 ..  868602 - -11.8   -5.0133   GACCCGGTGAAAAAA              GGGCGC CGCA GCGCCC               TTTCATCTTATAACC 100 33
 JC965_04240  866795 ..  866810 - -11.8  -3.71848   CGTGGTCATGAAGAA              GGGCGC CGAA GCGCCC               TGGTGCGGGTCAGGA  83 56
 JC965_04235  866466 ..  866483 - -12.7  -4.77165   CGTTTCATAAGAAAA             GCCGCTC CATG GAGCGGC              TTTTTGTTGTCTGTC 100 57
 JC965_04205 NONE
        nadC  856909 ..  856923 - -12.8  -4.60797   CCTGCATATAGAAAA               GGCGCC GAT GGCGCC               TTTTGCAAGTTTCGA  95 83
 JC965_04195 NONE
        tapB NONE
 JC965_04185  853180 ..  853202 -  -2.5  -2.64155   GCCGGGGGAAATGCA           CCGCCCGGC CCTCT GTCGAGGGG           GTCAGTGTATCACAG  38 27
 JC965_04180 NONE
        coaE NONE
        zapD NONE
        yacG  850620 ..  850633 -  -9.5  -4.91873   GATACCAACTAAAAA               GGGCC TGAG GGCCC                TTTTTTGATCGTGAA 100 45
 JC965_04055 NONE
 JC965_04050 NONE
 JC965_04045 NONE
        yraP  822964 ..  822981 - -12.7  -5.68438   TCATCAAATAAAAAA             CGCAGCC TGAA GGCTGCG              TTTTTTCATCCTGCC 100 47
 JC965_03995  816200 ..  816210 -  -5.4  -3.49687   AGCTCCCAGAAAAAG                 TTGC AGT GCAA                 TCGTCAAGGTCTGAC  54 72
 JC965_03990  814784 ..  814809 - -16.1  -4.88067   ATCGATGGATAAAAA         TCACCCGCGGC GGTT GCCGCGGGTGT          GAGGGGCTTAACGGA 100 33
        degS  813568 ..  813583 - -11.8  -5.24531   AGCGGGCACAAAAAA              GGGCCC TGTC GGGCCC               TGCGAGGATCCGCCC 100 42
 JC965_03980 NONE
 JC965_03975 NONE
 JC965_03970 NONE
 JC965_03965 NONE
 JC965_03960 NONE
 JC965_03955 NONE
 JC965_03950 NONE
 JC965_03945  807640 ..  807675 - -11.8  -3.71848   GGGGGTCATTAACAA    GCCAGGCACCG-CCCAG TGA CCGGGTCGGTGCCTGTG    GGGTTGCTATGCCAG  83 32
        tilS  800226 ..  800240 -  -8.5   -4.1552   TACGCCCGCAAGAAA               GCCGG GGGCT CCGGC               CTGCCCGAATAGGGC  73 80
 JC965_03905  796714 ..  796730 -  -7.9  -3.39327   CCCTCACAGGGAGAA              CCCGACG CCC CGCCAGG              GGCACCTGACCAGCT  58 481
 JC965_03880  792739 ..  792757 -   -16  -5.06414   TGGCCTGAATAAAAA             GGGGAGCC GAT GGCTCCCC             TTTTTTGTCTTGCCG 100 50
 JC965_03850 NONE
 JC965_03845  784515 ..  784532 - -14.1   -4.7497   TTCACCCATGAAAAA             GCCCGGC ACGG GCCGGGC              TTTTCACTCTGTGGC 100 46
 JC965_03840  783853 ..  783876 -  -3.1  -2.83899   AACCCTTGAGGAAAT          CCCGACTCAC CAGCT GCGAA-CGGG          GCCTGTGTCCAGGTG  41 8
 JC965_03835  783457 ..  783470 -  -9.5  -5.19212   ACGAGCATCAAAAAA               GCGCC ATAC GGCGC                TTTTTTGTTGGGCAT 100 59
 JC965_03820 NONE
        zipA  777217 ..  777236 -   -10  -5.38054   GGGCAGAAACAAAAA            TGCGGCAC CGGG GTACCGCA             CTTTTCATTGTTCAA 100 54
        ligA  775118 ..  775135 - -14.1  -4.08144   CCCACCAACGACAAA             CCCGGCC AGTG GGCCGGG              TTTGTCTGCTCAAAC 100 49
        nrdD  771514 ..  771541 -  -6.9  -3.53012   CCTCCCCCTTCGAAA        GGGAGAGGAGC TTCTTT GCCCCCTTCCC         TGCCAAGGGGAGGGC  58 60
        nrdG NONE
 JC965_03790  770687 ..  770706 - -11.4  -5.81412   GGCAGGCAAAAAAAA            GCCAACCC CGGA GGGCTGGC             CTTGTGATCTCTCAC 100 44
 JC965_03785  770174 ..  770194 - -18.3  -3.84266   ACAGCCCACACGAAA            CACCCCGGC CTG GCCGGGGTG            TTTGTCATTTCACTT 100 30
 JC965_03760 NONE
 JC965_03755  764434 ..  764451 -  -8.4  -5.07652   CGGGGCAAAACAAAA             GGGAGC TCAAAG GCTCCC              TTTTATCTGCGCAGT  90 82
 JC965_03745 NONE
 JC965_03740  761934 ..  761955 - -14.5  -3.80573   GCCAGCACCATGAAA           GAAGGGAGC CTCG GCTCCCTTC            TTGCTGCCCTCGTCA  91 80
 JC965_03730  760105 ..  760122 - -14.1  -3.37796   TCCCATGATCCACAA             GGGCGCC TGCG GGCGCCC              TTTTTCATGCGGTTC  83 39
 JC965_03720  756338 ..  756349 -  -3.6  -4.65168   ATCACACCTGAAAAA                GGGC TTTT ACCC                 TACACCTTGAAGCGC  69 278
 JC965_03715  754716 ..  754739 -  -4.5  -3.33696   GTCGGTCTCAAGGAA          CAGGAAGAC CCGACC GCCCCCCTG           GCGACAGATGGCGGC  49 318
        phoB  753715 ..  753761 - -12.9  -3.54089   TAGAGACAGCAAAGA GCCGGGTCCAATGCCCGCCGGC AGGG GCTGGCGG-CACTGGCCCTGAC CTAGAGACGGGTCGA  79 26
        phoR  752345 ..  752361 - -13.7  -5.14563   GCCCGGATGAAAAAA              GGGCTGC GAT GCAGCCC              TTCTCTCGTTGCTAA 100 58
 JC965_03695  751105 ..  751123 - -11.7  -4.45544   GCGCACCAATGAAAA             CGAGCCC GCATG GGGCTCG             TTTTTCTGCAAGGGC  91 49
 JC965_03690 NONE
 JC965_03685  749691 ..  749705 -    -5  -2.76492   GGAGCCAGCTCAAAG               CAAACG GAA CATTTG               TCGTTGTTGGCAAGG  47 5
 JC965_03680 NONE
 JC965_03675  747880 ..  747893 -  -5.9  -3.05022   GTCGTCACAGAGAGA               GGCAC CATG GCGCC                GCACGGTCTGCATCA  51 38
 JC965_03670  747750 ..  747767 - -10.5  -3.00022   TTGACGTCACAGAGA             GCGGCAC CATG GCGCCGC              ACGGCCTGTATCAGG  67 36
 JC965_03665  747624 ..  747637 -  -5.9  -3.05498   GACGTCACAGAGAGA               GGCAC CATG GCGCC                GCACGGTCTGCATCA  52 38
 JC965_03660  747500 ..  747515 -  -6.8  -2.91239   GAGAAAAACAGAGCA              CCATGC CGCC GCACGG               CCTGTATCAGGCCCT  53 32
 JC965_03655  746675 ..  746702 -   -20  -4.56597   TGGGCGGTCCAAAAA        CAAACGGCGACC TCAG GGTCGCCGTTTG         CACCACGCCAGCCGG 100 42
 JC965_03650 NONE
 JC965_03645 NONE
 JC965_03640  744106 ..  744132 -  -5.7  -4.64861   TTTTTCGAAAATAAA         TCGGCTGCACC GCATT GGGGCAGCCAT         TTCTGCTGACAACTG  75 204
 JC965_03635  742801 ..  742817 - -15.1  -2.81476   AGCCAGGGAAAACAT              GGGGGGC CAG GCCCCCC              GGTGACTGTCGACTC  81 39
 JC965_03630 NONE
 JC965_03625 NONE
 JC965_03620  739462 ..  739476 -  -8.6  -2.53345   TCGATATATCAAGAG               CTTCCA TCA TGGAAG               TTTCATGGTTGAAGC  53 269
        yfcD  738673 ..  738691 -  -5.9   -4.2704   TCGAGCAGCAACAAA             GCGATCG GGGAG CGAACGC             TTGTCGCCCCTATTT  69 35
 JC965_03605  738024 ..  738046 - -17.8  -2.85297   CCACGGCAAACACGA           GAGCCAGGCA AGT TGCCTGGCTC           CATCCAAACGCGGCC  88 97
 JC965_03600  736983 ..  737006 - -18.2  -5.36441   CCCGCACACAAAAAA          GAGGGGACGC CGCG GCGTCCCCTC           TTTCATTTCATCACC 100 44
 JC965_03590  733415 ..  733434 - -13.6   -5.2696   GTAAAATGCAAAAAA            GCCACGAC CAGA GTCGTGGC             TTTTGCGTATTTCGC 100 158
 JC965_03575  729278 ..  729295 -  -6.9  -3.54741   GAGGAGCTTTCCAAA             GTGCTGC TGGT GCAGCGC              CGCATTCGCCAGCGG  59 501
 JC965_03560 NONE
 JC965_03555  725191 ..  725208 - -11.3  -5.24129   GCCGTGCACAAAAAA             GGGATGC CGAG GCATCCC              TTCTGCGTGTCTGTC 100 50
 JC965_03530  719988 ..  720006 - -11.7  -5.72622   TTGACAAATAAAAAA             TGCCGCC TCGAG GGCGGCA             TTTTTATCAAGGTTG 100 48
 JC965_03510 NONE
 JC965_03505  711482 ..  711511 - -23.7  -3.16564   CTCCGATCTCATCAA       CAAGCAGGGCGCC CATT GGCGCCCTGCTTG        CTGTCATCCGGGTCG 100 46
 JC965_03500  708847 ..  708864 - -12.7  -4.76041   CACAGCCAGTAAAAA             GGCGACC ATCC GGTCGCC              TTTTTATTTCTATCG 100 58
 JC965_03445 NONE
 JC965_03440  697119 ..  697140 - -11.5  -3.68183   TCAGACAGATAAATA           CAGGGCGCC CTCG GGCGCCTTG            TTGCTATCTGGGGGG  77 128
 JC965_03420  689645 ..  689662 - -12.7  -4.13945   ACGGGGACGGCAAAA             GGGCTCC CGAG GGAGCCC              TTTTCATTGCCGGTC  91 51
 JC965_03415  688736 ..  688749 -  -9.5  -3.06796   GGCTATGCCATCGAA               GCCGC GCGG GCGGC                CATGGCAGATGGCCG  60 316
 JC965_03405 NONE
 JC965_03400  687033 ..  687070 - -16.3  -3.85698   CCCTCGGGTGAGAAA   GAAAAGGGGCCGGCTCC GTGA GGAATCGGCCCCTTTGC    GTTTGCCCCCTTCAG 100 37
 JC965_03390  684825 ..  684848 - -13.9  -3.93256   GATATCCGCAAAGAA          CAAGCCCCG ACAGTG CGGGGCTTG           CTTGGGAAGGATCAG  93 37
 JC965_03385 NONE
 JC965_03380  683618 ..  683636 - -13.1   -3.5525   ACACACCTTTGTAAA             CCCCGGC CCGGC GCCGGGG             CTGGGAAAGGGGTCG  81 43
 JC965_03245  654585 ..  654596 -  -3.6  -3.01712   GGGGCTGTGCCAATA                CCCA GGCC CGGG                 TCATCGCGGTGGGGG  43 138
 JC965_03235  650674 ..  650688 -  -5.6   -3.4376   ACAGACCCATGATAA               GGGGAG ATG CTCCTC               ATGCGGAGCATCATT  54 77
 JC965_03230  649324 ..  649342 -   -16  -5.38249   AGCAACCATAAAAAA             GACCGCCC ATG GGGCGGTC             TTTTCATTTTCGTCT 100 174
        rsmD  636498 ..  636510 -  -3.3  -3.38564   CAAATTGACGGAGAA                GGGGA CTG TGCCC                ATCTCCCCTTTAAAC  48 35
 JC965_03170  636050 ..  636080 -  -9.9  -4.57569   TTAGCCTCGGAAAAA      CGCAAAAGGAGTGA CGAA TCACTCCTTCTG-G       TCGGGCCGGGGGTGG  87 42
 JC965_03155  633751 ..  633768 - -12.7   -4.8622   TTGCCCAATCAAAAA             GACCGCC TGCT GGCGGTC              TTTTGCGTGATGTCT 100 47
 JC965_03145  631708 ..  631727 -  -6.4  -2.70932   GCTGGTGGCCAACGA            CG-TGGGCC AGG GGCCCATCA            ACTACGTTGGCACCA  49 129
 JC965_03125  628408 ..  628426 - -11.7  -3.66654   GATGTCAACGTGAAA             CGGGGCT TCTTG AGCCCCG             TTTTTTTTGCGCGTC  77 39
 JC965_03110  625871 ..  625900 -  -4.2  -3.40403   GTGCGGGGAGGAGAA       CGGCGCCAAC TTCGATATCT GCTGGCGCTG        CCATCACGATCCCCA  51 66
 JC965_03095 NONE
 JC965_03090  621726 ..  621741 - -11.8   -4.7497   GGCAGCCATGAAAAA              CGGGCC TTCT GGCCCG               TTTTGCTATGTGATC 100 49
 JC965_03080  620677 ..  620694 - -14.1   -5.4833   TCACCCAATAAAAAA             CGGCGCC TTCG GGCGCCG              TTTTTTATGCTGGAC 100 78
 JC965_03045 NONE
 JC965_03040 NONE
 JC965_03035 NONE
 JC965_03030  608450 ..  608470 - -10.4  -2.71731   GGGAGGTGGGAAGGA            GGTGAGGG ACGGA CCCCCACC            TCGACACGTCGTTAC  64 37
 JC965_03025  607169 ..  607186 - -11.3   -4.6709   TAAAAGTAGACAAAA             GCCGAGA TAAA TCTCGGC              TTTGTATTGTCTGCT  95 48
 JC965_03005  604775 ..  604806 - -11.6  -5.44119   TCTATCCTAAAAAAA      TGCCCCGG-CCAGCA GAT TTCTGGGCCAGGGCA      TTTAACCGGTTCAAT 100 70
 JC965_03000 NONE
 JC965_02995  601768 ..  601786 -   -16  -4.47217   AATCAGCAACGAAAA             GGCCGGCA TGT TGCCGGCC             TTTGGTGGCAATCAG 100 45
 JC965_02990  600182 ..  600203 - -15.9  -5.14563   GGCGGGATCAAAAAA           GGGGAAGCC GTCC GGCTTCCCC            TTTCTCATGCAGAGA 100 51
 JC965_02965  595937 ..  595970 - -16.2  -2.77222   AGGATGAGGGGAAAT     GAGACAGGCCA-CCA GCCCA TGGCTGGCCTGTCTC     GAGGAGGACGGGGGC  82 48
 JC965_02935  588940 ..  588953 -  -9.5  -5.53991   GATTGATGAAAAAAA               GGGCC CAGG GGCCC                TTTTTCATCCGTCAT 100 51
 JC965_02930 NONE
 JC965_02925 NONE
 JC965_02920  587014 ..  587038 - -18.5  -4.90302   CAGGAACAAAATAAA          CGGCCCGCCCC GAG GGGGTGGGCCG          TCAAAAACTGGCTGG 100 43
 JC965_02915  584935 ..  584949 -  -4.3  -3.69323   CCAGCAGTACTGAAA               TGATG TGTCT CATCA               GGTTCTCTCCGTCTT  54 23
        ilvN  584002 ..  584017 - -11.8  -4.88407   CGATGCAATGAAAAA              CCCGCC GAGA GGCGGG               TTTTTTTATGGCTCG 100 461
 JC965_02895  579763 ..  579778 - -11.8  -4.66833   CCTGAATGTGAAAAA              GGCGCC TGAG GGCGCC               TTTGTCGTCAGTCTG  95 52
        dapA NONE
        bamC  575820 ..  575838 - -11.7  -4.84311   CCGGACATAACAAAA             CAGGGGC GCGAG GCCCCTG             TTTTCATGCTTACTT 100 35
 JC965_02865  574476 ..  574496 - -15.4  -4.46267   ACAACCCAATGAAAA            CGGGCCCC GCCAT GGGGCCCG            TTTTGTCATCTGCGT 100 104
 JC965_02855  572837 ..  572856 -  -3.5  -4.59846   ATGACAGAAAAATAA            CGGGATG CAGGCT CACCCCA             GCAGATAATGGGGTC  69 18
 JC965_02850  572096 ..  572129 - -10.4  -3.14132   GGCCTCGCTGATCAA     CATGGGCACATC GGGAGTCAAA GATGTGCCCACG      TTACTGCAACGGGGA  68 47
 JC965_02845  571617 ..  571634 -  -3.3  -3.53091   ATCCCGGTGCCCAAA             GCGCGAG CCAC CTCTCAC              TTGACTGGATTATCA  48 22
 JC965_02840  570774 ..  570796 - -19.2  -2.60075   CCCGCCCCAAGCAAG           GAGGCCACCC CCG GGGTGGCCTC           TTCATTTGCACAACC  91 49
        arcB  567253 ..  567266 -  -5.9  -2.78384   GTCGTGTCTACGAGA               GCAGC CAGC GCCGC                AGGCGGGCGATGTCA  49 4
         dgt  565623 ..  565637 -  -4.2  -5.14563   CGGGTGATGAAAAAA               GCAGGT GTT ACCTGT               CCCCTCCACGCGGCA  81 227
 JC965_02820  565291 ..  565310 - -13.6  -5.34309   ATCAGGAAAGAAAAA            TGGCAGGC CCAG GCCTGCCA             TCCACCAGGTCGGGG 100 57
 JC965_02815 NONE
 JC965_02810 NONE
 JC965_02805  557662 ..  557687 - -20.5  -5.40072   TCGGGCCGAAAAAAA         CGGGGCAGACC CAGA GGTCTGCCCCG          TTTTTCTCTCACTTG 100 43
 JC965_02780  553473 ..  553492 -   -15  -3.53531   CCAGCAACATCAGAA            GACCCGGC CCGT GCCGGGTC             TCTCTCATCCGGGCT  88 40
 JC965_02765 NONE
        tsaE NONE
 JC965_02755  547785 ..  547829 - -16.3  -3.14211   ACCTGGCGCCATCAA TGCTCACCGCCCCTCCCTGCC ATC GGCAGAGAAGGGCGGCGTTCT TCACCCGCGCTATTT  88 35
        mutL  545835 ..  545851 - -10.1  -3.10354   CATATGGATGCAACA              GACGACG AGA CGCCGTC              AGTTGCCATCGGCAA  66 24
        miaA  544822 ..  544835 -  -3.8  -3.97511   TATTCAATATAACAA               CCTG ATTATA CAGG                AGTGTCAAGCCGGAC  58 30
         hfq NONE
        hflX  543159 ..  543170 -  -2.2  -2.51133   CATCGACCCATCAAT                GCCT GATA AAGC                 GTTGTAAACTCTCAC  38 9
        hflK NONE
        hflC  540979 ..  540998 -  -9.3   -5.3104   GCACCAAAAACAAAA            GGGTCTG ACAATG CAGACCC             TTTGAATGTGACCTC  95 48
 JC965_02720  540668 ..  540682 - -11.4  -5.17353   ACATGCATGAAAAAA               GAGGCC TTC GGCCTC               TTTTTTATTGTCTGC 100 70
        rplU  539125 ..  539138 -  -2.3  -2.60194   ACTCCTCTAATTAAG               CGCTG ATGC CAGTG                ATTTTGACTTCAGTG  38 7
        rpmA  538803 ..  538822 - -16.4  -5.35224   GTCAGAAAAACAAAA            GCCCCGCC TGTT GGCGGGGC             TTCGGATCCTTGCGG 100 48
        cgtA  537401 ..  537421 -   -14  -5.60993   CCTCCCATAAAAAAA            CCGGAGCC TGTCT GGCTCCGG            TCTTGTCACGAACAT 100 46
 JC965_02695  535664 ..  535683 - -12.2  -5.60993   TCGCCCATAAAAAAA            CGGTCAAC CCGG GTTGACCG             TTTTTCGTTCCACTT 100 47
 JC965_02685  531478 ..  531497 -  -4.9  -3.10715   CTTACCACCACGCAA            TCGTGGC TCTTTC GCCCCGA             GCAACCAGGCTTGGC  47 71
 JC965_02680  530826 ..  530858 - -17.7  -4.15854   AAATGGAGCTGAAAA      CAGAACGGGCCCGGC AAT GCCGGGCCCGTTTTT      TCATGATGAGCGGAT 100 40
 JC965_02645 NONE
 JC965_02640 NONE
        djlA  521212 ..  521230 - -14.6  -5.45802   CTCTGAAAACAAAAA             TGCCCGTC ATC GACGGGCA             TTTTTTTATGGCGGG 100 49
 JC965_02610 NONE
 JC965_02605 NONE
 JC965_02600  512967 ..  512997 -  -6.6  -2.89564   TGCGCATCTCAGACA       TCCCCCCTGCGGGC GAT GCCCACTGGCAGGG       GGCCCCGGACGCCAG  50 335
 JC965_02585  509943 ..  509964 - -15.9  -3.32022   CGGGGCAGATAGCAA           CAGAGCGCC ATCA GGCGCTCTG            TCTTTTTGCGGTATC  87 81
        hutX NONE
        hutZ  505963 ..  505982 -   -15  -4.97957   GACATAACAACAAAA            CGGGCAGC CCAG GCTGCCCG             TTTTCTCATCTCGCT 100 51
 JC965_02540  501629 ..  501644 - -11.8   -4.4648   ACCTTCATGACAAAA              GGGGCC CGAG GGCCCC               TTTTCCTTCATGCTG  91 52
 JC965_02535  500229 ..  500268 -    -7  -3.48276   CCCTTTTCCAGATAA  GTCGGAGGCCTGCCGCGCC AGA GAC-CGGCAGACCTGTGTC  ATCGGCCCTGTTCAG  58 24
 JC965_02530  496386 ..  496401 -  -2.5  -5.00339   ATTAACAACGAAAAA              GGCAA CGCAAC CTGCC               AGGTAACGCAGACAA  72 366
 JC965_02525  493637 ..  493662 -  -9.8  -5.65177   ATACGCATAAAAAAA         TCCGAAACCC AACAAG GAGTTTCGGA          TTCTTACACAGCCTG 100 108
         rrf  492894 ..  492914 -  -5.4  -3.62032   ACACTAACCGGTAAA            GACCACGC TCAAT GCGTAATC            TAAAATTGGGTGCCT  56 37
 JC965_02510 NONE
         rrf  492632 ..  492651 -   -15  -4.85433   ACAGAAATGCAAAAA            GGCCTCCC GCAT GGGAGGCC             TCTTCTGAATAGGTG 100 40
        ebgR NONE
        ebgA NONE
 JC965_02490  487609 ..  487642 -    -6  -3.65902   GTTATCTCAGCGAAA     GGGCGGGGCATGA TGTGTAGGG TGA-GCCCCGCCC     TTTCGGCTTTGTCAG  58 59
 JC965_02485 NONE
 JC965_02480  485704 ..  485714 -  -2.4  -2.71681   GAACCGGTGCAATCA                 CCCG CAC CGGC                 TCGCAATACCATTCA  38 38
 JC965_02475  484073 ..  484092 - -12.8   -5.4505   CCGGCCAACAAAAAA            CGGGCGAC CAAG GCCGCCCG             TCTCCTGTTTGCCAC 100 48
 JC965_02470  482831 ..  482853 - -19.2  -4.06055   ACGCGGCAAACGAAA           GAGGGAGGCC CAT GGCCTCCCTC           TTCTTTATCCGGACC 100 43
 JC965_02460  479607 ..  479620 -  -9.5  -5.02074   GCATCCTGCAAAAAA               GGCCC CGAG GGGCC                TTTTTCATTGTTGCG 100 50
 JC965_02440  475910 ..  475927 - -14.1   -4.1899   TCATGCCATGCAAAA             GGCCCGC ACAT GCGGGCC              TTTTCTTTTTCGGGC 100 47
        uvrD  468416 ..  468439 - -18.2  -5.00642   TAACGGATATAAAAA          CCAACCCGGC CTAA GCCGGGTTGG           TTCAGTTAAAAAGCG 100 48
 JC965_02410  467176 ..  467187 -    -3  -3.06796   CTCTATTTTATTGAA                GATT GAAA AATC                 TTATAAATATAAGAG  43 1
 JC965_02405  465234 ..  465255 - -11.6  -3.44334   CGAAACCAATATTAA           TGGCCGTG GATGAT CACGGCCA            TATTGAATATCCACA  75 149
 JC965_02385  461197 ..  461224 -   -20  -4.85599   GGCAGGCCATAAAAA        GACCCGGACTGA CAGT TCAGTCCGGGTC         CAGTCACCCCTGCTC 100 57
 JC965_02380  460640 ..  460668 - -13.2   -2.5955   ACTCTTTACAATTCA       CCCGGCC-GC-ACG CCC CGTCGCTGGCCGGG       TTTCTCTCTCCGCTA  73 69
 JC965_02370  459570 ..  459601 - -23.2  -4.07885   GAGCCGGGCCGAAAA      CGACAAAGCCTGCC AGGG GGCAGGCTTTGTCG       TCGCTGAAGCGCGGT 100 41
 JC965_02355  457119 ..  457139 -  -3.1  -3.03159   GCAAGGGGGTGAAGA            GCGGGCTGG CCA CCAATCTGC            TCAACCCCAAGGCGA  43 351
 JC965_02320  450675 ..  450707 -  -6.1  -2.78384   CGCCGGGGCAGCACA      GGGGGATGACGCCCG GGA CGAGCGCCATCCTGT      GTGATGTGGGGGTCA  49 38
 JC965_02315  449061 ..  449093 - -19.1  -3.48593   TACTCCTTGACAGAA      GCGCCCCCGCAGACC GGC GGCCTGCGGGGGCAA      GAGATTAAAGCCATG 100 57
 JC965_02310 NONE
 JC965_02305  447133 ..  447145 -  -4.8  -3.70902   TGCGGGACATGGAAA                CCTC GGCGG GAGG                AGGCCGGCACCCCGG  57 68
 JC965_02300  446202 ..  446218 -  -4.3  -3.61178   TTGATTGATCGCAAA              CTTGCCG CCT CAGCGAG              GGGTTTTGGCGGTTT  54 95
 JC965_02295  445521 ..  445544 - -18.2  -2.71144   GACCGCTGGCAATGA          CAGAGGGGCC CGCA GGCCCCTCTG           TCATTCACCGTGGCA  86 41
 JC965_02285 NONE
        rmuC  443258 ..  443288 - -24.2  -3.72576   GGCTGTTGCATGAAA       CGAAAAGGGCAGCC AAT GGCTGCCCTTTTCG       TTGTCCCGGCGAATG 100 51
 JC965_02250  436221 ..  436242 -  -4.4  -2.72344   CTCCAGTGGCAAGGA           CACGTCAG AAATTA CTGACCTG            ATAACCAGATCCGAC  43 8
        dprA NONE
 JC965_02240  434603 ..  434617 -  -2.8  -3.53012   GGCCGCGCCTTGAAA               TCCAGA TGG CCTGAA               TTCTACCAGCGCGGC  48 50
 JC965_02235  433763 ..  433783 -  -8.9  -2.96274   TTTGGCATAAGCACA            TGCGACAGC CAC GCTGCCGCC            TCTCATCACTGGATT  61 271
 JC965_02230  433181 ..  433191 -  -8.2  -3.45592   AACCTGCATGAAACA                 GGGC CGT GCCC                 AACTCAGGATGGGCG  64 29
        hemF  432164 ..  432180 - -13.7  -3.94877   ATCGGCCAATAAGAA              GGGGCCA TCA TGGCCCC              TCTGGTCACAACCAC  93 31
        aroE  430942 ..  430963 - -10.9  -5.72616   ATGCAGATAAAAAAA           TCCCCAGTA CGAA TACCGGGGA            GTTATAAAGGTGACT 100 323
 JC965_02210  428810 ..  428837 - -14.3  -5.11033   TACAACCTCAAAAAA        GAACAGGGAAC ACAATG GTTCCCTGTTC         TTTTCAACAAGATAA 100 54
 JC965_02205 NONE
 JC965_02200 NONE
        hemN  425587 ..  425600 -  -9.5  -5.52096   AAACCCAATAAAAAA               CCGCC GAAA GGCGG                TTTTTTATTGTCCAA 100 55
        typA  417471 ..  417486 - -10.4    -5.626   GAGCCCATAAAAAAA              GAGGCC TTAA GGCCTC               TCTTTGGTCTGTCGA 100 55
 JC965_02160  416358 ..  416398 -   -17  -4.07568   CCTCTCCTCTCAAAA CAGC-ACGACCGCCCATCC TGCG GGATGAGCGGTCGTCGATG  CTACCAATAAATGCC 100 93
         dtd  415841 ..  415857 -  -5.1  -3.63515   CGGCAGGGTGAAGAA              CCTGC GAAGTGT GCAGG              CATCGCGTCCTGCCG  56 70
 JC965_02145  414032 ..  414054 - -13.5  -3.53444   CCGCCCAATAACGAA           CAAGGCCTC GCGAA GAGGCCTTG           TTGCTGTGAACATCA  82 45
 JC965_02120  405891 ..  405912 -  -9.3  -2.91681   CTCCAACTCTATATA           CGGGCGCGG TCGG CCGCAGCCG            GGCGCGCGACATGGC  61 41
 JC965_02115 NONE
 JC965_02110  403370 ..  403397 -  -9.8  -4.56597   CCGGGGGCGGAAAAA        CAGCAGGCCACC CGGG GGTGGCCTGTTT         AATTTTTCTAAACGA  87 48
 JC965_02105  402556 ..  402567 -  -7.2  -2.89742   GGCAACCCGCAGACA                CCGC CATG GCGG                 GCAGGAAGGCAGACG  56 49
 JC965_02090  400202 ..  400218 -  -4.3  -4.85599   TTCACCCGACAAAAA              GTCTGCA TCG CGCAGGC              TTTTTGCTTGCCAGG  78 96
 JC965_02075 NONE
        secB NONE
        gpsA  394785 ..  394816 - -18.8  -3.53012   CCCCCTTGCGGCAAA      GAAAAGGCCCCGCC AGCT GGCGGGGCCTTTTG       CATTCTGCGGCTGGC 100 44
        bioH  392519 ..  392531 -  -4.7  -3.37522   ATCTCAGTCAATGAA                CCGCC GCA GGAGG                GTGATGAACTGCTCT  49 1
 JC965_02045 NONE
 JC965_02040  391399 ..  391412 -  -9.5   -5.1925   CCAGAATGCAAAAAA               GCCCC GAAA GGGGC                TTTTTCATGCCTGCA 100 51
        ompR NONE
        envZ  386075 ..  386096 - -14.5  -4.12532   CCCCTGACAGACAAA           GGGCGTATC CCTC GATACGCCC            TGCTTTCAATCCATC 100 31
        rpsJ  384489 ..  384504 -  -2.5  -3.33696   TCTTTCCGTAATTAA              CCCAG GCTGAT CTGGA               CGTCTACACCAGCTG  44 6
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ  379788 ..  379814 - -18.1  -5.05782   AGGTAGCCTAAAAAA         CAAACGGCCCC GATGG GGGGCCGTTTG         GGCTAAAAAGTACCG 100 43
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN  378126 ..  378140 -  -7.1  -3.14229   AGATTCTTACCAAGA               GGCCT TTTTG AGGCC               CGGAATTTCGCCCTT  54 2
        rpsH NONE
        rplF NONE
        rplR  376801 ..  376811 -  -3.2  -3.32963   ACTCCTAGCTTAGAA                 CTGA AGA CCAG                 CGTCACGAGCAGCGG  46 9
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ  374119 ..  374146 - -13.6  -4.90002   CAATACACAACAAAA        GTTG-GCTGGCTA TAT TAGCCAGCACAAC        TATTTGTTGCAAGTA 100 55
        rpsM NONE
        rpsK  373264 ..  373291 -  -2.6  -3.28261   ACAATCCTAGACCAA        GTAGCTACAGCGT TAC ACGCGGC-GCTTC        TTGGGAGGACGACAA  44 10
        rpsD  372613 ..  372631 - -10.4  -2.59431   TCTCTTTAGAAGCTA             GCTTTACT TGG AGTAAAGC             TCGACGATCAGCTGT  64 10
        rpoA NONE
        rplQ  371146 ..  371162 - -10.8  -5.13722   TCCACCAAAAGAAAA              GCCGGG ACAAG CCCGGC              TTTTTCTTTTATCAC 100 37
 JC965_01860  368798 ..  368814 - -10.8  -5.93809   GGTTTATAAAAAAAA              GGGGCC TGAAC GGCCCC              TTTCTTCCCATGGTC 100 43
        frdA NONE
 JC965_01850 NONE
 JC965_01845 NONE
        frdD  364880 ..  364896 - -10.8  -5.61596   ATGGTCATAAAAAAA              CCGGGC ACTGG GCCCGG              TTTGTTATGCAGTCA 100 49
 JC965_01830  362825 ..  362856 -  -6.4  -2.84504   ACGGGGGAAATACGA      CGCCCTGCTCCACC AGCT GGCGGATGAGGGGG       AGCTGTTGCCGGTAC  50 509
 JC965_01815 NONE
 JC965_01810 NONE
 JC965_01805 NONE
 JC965_01800 NONE
 JC965_01795  356850 ..  356889 - -14.4  -3.53012   GTTCTCTCCCTCAAA  CGACACTGCCCACCAG-TA TGC TAGCTGGTGGGCAGAGTTG  AAATAGCGCACTGTG  85 51
 JC965_01790  356135 ..  356145 -  -3.2  -2.54896   GGCGGATGGAACGGA                 CACG GCT CATG                 GGGCGGAGGCTCCTC  39 21
 JC965_01785  354658 ..  354674 - -15.1   -4.7497   TGCAGCCATGAAAAA              CGGGGGC CTG GCCCCCG              TTTTTCATGGCGTGC 100 56
 JC965_01775  352654 ..  352677 - -11.7  -5.50499   CCAGATGCAAAAAAA          CCGGTGCGC AGGGTA GCACACCGG           TTGGTCGGCTTCTAA 100 71
        earP  351395 ..  351416 -  -3.7  -3.64812   TTTCATGTAAAAAAT           TCCTGTTCGT GAA ACGGAC-GGA           TAAAAACTGCCAGAT  52 40
         efp  350774 ..  350789 - -10.4   -5.4833   CCAGCCAATAAAAAA              GCGAGC CTGG GCTCGC               TTTTTTTGCAATCAC 100 55
 JC965_01740 NONE
 JC965_01735  344957 ..  344970 -  -3.1  -3.95324   TAGGGGCAACAAGAA               CGAAGC TGC GCT-CG               GCGGCGCCGTCGGTG  56 299
 JC965_01720  342018 ..  342038 -   -14   -4.3467   AGTGCGAGATGAAAA            CGCCCCCT GGTGG AGGGGGCG            TGAAGGCTTACTTGA 100 33
 JC965_01715  340131 ..  340148 -  -7.7  -2.62396   GAGGGTGGCAGAGCA             CCGGC-TG CTG CACGCCGG             ATTGCCGCTGCCCCG  51 357
 JC965_01700  338074 ..  338095 -  -7.1  -2.73364   TGCGCACGCCAATCA           GGCGCTGGC CCAT GCCCGCGCT            CACGGCTGGCTGGTG  49 500
        miaB NONE
 JC965_01680 NONE
        ybeY  333385 ..  333420 - -11.9  -2.62184   GTTGTGGCTATATGA    GGATGGGCATCGGCT GTTTCA AGACGATGACCATCC     GGTTCGTTACTCTTC  70 32
        corC  332403 ..  332424 -   -13  -5.51402   AGAGAGGCAAAAAAA           GCGCCCCT GACGAG AGGGGCGC            GGGATGTGCGTGGGG 100 51
         lnt  330695 ..  330714 -   -15  -5.04325   GCCAAACCATAAAAA            GAGGCGCC CAAG GGCGCCTC             TTTTGTTTATTGGCG 100 51
        leuS  327261 ..  327286 - -12.6  -3.20723   TTTGCATGAAGGGAA         GAGCGGCGGGC GCAGG GCCCGCCG-TC         ATCATCCGTGTGTCG  75 86
 JC965_01650 NONE
        holA NONE
        nadD  324985 ..  325017 -  -8.9  -3.01712   CCCGGCCTGGCAATA      GTCAGGGCCGGGCCC GGT GCGCCCGGACGTGTC      GGCTGATCCGCCTGC  61 51
        rsfS NONE
        rlmH NONE
        mrdA NONE
        rodA NONE
        mltB NONE
 JC965_01610  318941 ..  318951 -  -4.6  -5.47399   CCAAGTTGAAAAAAA                 GCGG GCC CCAC                 TATACCAGATGTGCG  88 133
 JC965_01605  317623 ..  317648 - -16.1  -3.41767   AGACCGCAAAAGACA         GGAGCGGCGCC TGTT GGCGCCGCTGC          TTGAGGAAGGGTCTG  90 41
 JC965_01600  317087 ..  317114 - -11.2  -3.90744   CCGGGCGGCAAATAA        TCAGTCGCCCCG GTGG CGGGGCGAGAGA         GGCAACTTACAGGAC  83 32
        lipB NONE
        lipA  315240 ..  315257 - -12.7  -5.93809   CGGCGATAAAAAAAA             GAGCGCC CAGA GGCGCTC              TTTTTTCTGCCAGCA 100 52
 JC965_01585  314117 ..  314156 -  -2.1  -3.61398   GGCCGTTTCCAAGAA  CATCAACACCGCCTT CGGTTTGGGC ATGACGGTGCTGGTG   GTCATGGTAATCGCC  49 518
        mscL  308220 ..  308233 -  -9.5   -5.4505   CCTTGCAACAAAAAA               CCGCC CGAA GGCGG                TTTTTTTTCAGCACA 100 58
        fldB  306107 ..  306126 -  -2.8  -3.36819   ACCAAACGAGAAAAT            CGGTGCG ATTTATG CGC-CCG            GCAGCCCGAGCGCAG  46 490
 JC965_01535 NONE
 JC965_01530  303071 ..  303090 - -16.4  -5.64274   CCATGGATAAAAAAA            GCGGCGCC TGAT GGCGCCGC             TTGAAGGGGGAGGAG 100 60
 JC965_01525  302555 ..  302586 - -23.2  -3.66874   GCAAGTGCAGTTAAA      CAACAACGGCGACC ATCA GGTCGCCGTTGTTG       TTTCTGTGTATCCGG 100 44
 JC965_01515 NONE
 JC965_01510  299374 ..  299389 - -11.8  -5.09762   AGCGCAATAGAAAAA              GCCGGG CATG CCCGGC               TTTTTCTATTTCTGG 100 185
 JC965_01500 NONE
        yhbY  281243 ..  281264 - -13.1  -3.58779   AAGAAGGGAAATGAA           GGAAAGAGC GAAT GCTCTTTCC            TGTTACTTGCGCGGC  81 28
 JC965_01410  280541 ..  280561 - -16.9  -3.24232   CGTCGGGGAAAGAGA            CAGGGGAGC CGG GCTCCCCTG            TTGTCTTTAGTCACC  90 32
        xseB NONE
        ispA NONE
         dxs  274929 ..  274946 - -14.1  -5.64873   GTGAATAACAAAAAA             GGGCGCC ATCA GGCGCCC              TTTTTTATTGCTTGC 100 52
 JC965_01305  259756 ..  259778 - -12.7  -3.40403   CTCCGTGGATGACAA           TCGGGAGCC TTGAT GGCCCCCGA           TTCTAACGACTTTAA  79 133
        torD NONE
 JC965_01295  258689 ..  258709 -  -2.4  -2.99596   GTGAAATCAACGAGA            TGTCAGCC TTTCT GGCGGCCA            AACGCCTGGATCCCG  41 7
 JC965_01290  256746 ..  256768 - -17.8  -2.80492   CATGATGATGAAGCA           GAAGGGAGCC ATG GGCTCCCTTC           TTTGCTTGCGTGGTG  88 54
         acs  254629 ..  254659 - -17.7  -3.04144   TCCGGATCCCGAAGA       CAACAAAGCCGGC ACGTG GCCGGCTCTGTTG       ACGTGGGGAAGAGAC  89 41
        aroQ NONE
 JC965_01275 NONE
        accC  251862 ..  251881 - -13.6  -5.70522   AAGAATAACAAAAAA            GGGCCATG TCGC CATGGCCC             TTTTTTACGTTGGCG 100 232
 JC965_01265 NONE
        panF NONE
 JC965_01255  248387 ..  248411 -  -5.5  -3.19602   CCTGCCAGAGCAACA          GCCTGCTGGCG CTG CGGGAGCTGGC          ACTCCATGACGGGGG  51 225
 JC965_01245  246582 ..  246606 -  -4.9  -3.36878   TTTATTTACCTACAA          GGGAATAGTCA GGA CGACGATACCC          GCTCTGGCGGCGCCT  49 40
        prmA  244886 ..  244915 - -20.1  -3.53091   ACGGGCGTCCGGAAA       CGACAAGGGCACC CTGG GGTGCCCTTGCCG        TTCAACGACCTAAGT 100 320
 JC965_01235  244161 ..  244203 -  -4.6  -4.23723   CAAGACCATGGAAAA CGCCAGCATGCAGGTGGTGC ACT GCATCGACCGCTTGCTGGAA AGCGCCTGAGCGAGC  65 55
        sppA  237707 ..  237720 -  -9.5  -5.60993   TGCCCCATAAAAAAA               CCGCC TGTC GGCGG                TTTTTTTATGGCTGT 100 49
 JC965_01200  234641 ..  234661 -    -4  -2.74605   CTCCTTGAAAATTGA           GCCATGAAC ACGG GTTC-CGGC            GGGCAGATCCTGTCG  43 43
 JC965_01195  234261 ..  234285 - -20.1  -5.25893   ATAGAGAGGAAAAAA          GAGGGGAGCCA TAA TGGCTCCCCTC          TTTCGTTTCGTTACC 100 65
        gltS  231331 ..  231352 - -15.9  -4.49556   GGGCCAGCAAACAAA           GAGCCCACC GCAA GGTGGGCTC            TGTCATACGGGGCCT 100 51
        prfB NONE
        lysS  226354 ..  226373 - -16.4  -5.60993   TTCTGCATAAAAAAA            CGCCCCGC AATT GCGGGGCG             TTTTGATTGCCATGG 100 78
 JC965_01160 NONE
        cysI NONE
 JC965_01150  220951 ..  220970 - -16.4  -5.27335   CTGCGCAAAGAAAAA            CGCCCGGC AGTT GCCGGGCG             TTTTTTTGTGGGCGG 100 68
 JC965_01100  213449 ..  213465 -  -9.4  -4.35483   GCCCATCACAAGAAA              GGAGCC TTGCC GGCTCC              TTTTTCACTGACTCG  79 79
 JC965_01085  211891 ..  211901 -  -6.8  -4.60487   CAGCAGTTGCAAAAA                 GAGG ACG CCTC                 GCCGGAGAAGCTCGA  78 193
 JC965_01060  208709 ..  208732 - -16.8  -3.74077   TGCCAGAGATGCAAA          GAGCCCGGTA TCGC TACCGGGCTC           TTTTTCATCAGAGGG 100 54
 JC965_01035  203999 ..  204015 - -13.7   -5.5112   TTCACCAATAAAAAA              GGGAGCC AGC GGCTCCC              TCTCTTCTCTGCAAC 100 46
        pspA NONE
 JC965_01025 NONE
        pspG  202645 ..  202666 - -10.1  -4.82901   TCGCCCCCATAAAAA           GGGCCACTG CAAG CAGTGGCCA            AGGAAGGATGCGAAA  91 51
 JC965_01005  200294 ..  200306 -  -4.7   -3.6682   CCCGACCGAGGTAAA                CTGGG CCG CCCTG                GCGGCGCTCGGGGTA  55 442
 JC965_00995  198612 ..  198630 -  -5.8  -2.78935   AGACCCCGGAGCAGA             TGGCCGGC TTT GCCGCCCT             GATCGGGTGCTTGGC  46 255
        znuA  196086 ..  196096 -  -5.4  -3.61715   GATGGGGGCGAACAA                 CCAT TTC ATGG                 CAGACACTCCATATC  56 100
 JC965_00975  195344 ..  195385 -  -6.4  -3.69283   CAAGGCACGCAACAA GACGGGCCC-GGTGCTGAG CGTCC CGCAGCACCCGGGGGCGGC AAGATACTTCGAAGA  62 60
        mepM  191394 ..  191420 - -10.8  -5.32882   TATCAGGACAAAAAA         TCGAGGGAGGCA TGA TGCCTCCCTCTT         TCTATTGCAAGCCCC 100 186
 JC965_00950  189569 ..  189582 -  -8.1  -6.06529   CAGAGATAAAAAAAA               CTCCC GACC GGGAG                CTTTTTCTATGGGCA 100 54
 JC965_00945  187993 ..  188040 - -11.1  -2.69468   GATGGGGAGACAGCA GGAGGGCACCGGAGGCGGGCAC TGATG GCACCCGCCGTCGGCGCTC-CC GTCAATACTGCTTGG  67 27
 JC965_00940  187153 ..  187183 - -22.7  -3.32498   CAGGCGAGAGATCAA       CGACAAGGGCGCC ATCAA GGCGCCCTTGTCG       TCGTTGCCGTCGGCA 100 48
 JC965_00930  184839 ..  184866 - -16.2  -5.26875   GCCTGAACCAAAAAA        CGCGGGGCCGGC GATG ACCGGCCCCGGG         GATGGCACGAGCGCG 100 41
 JC965_00920  183319 ..  183339 - -14.7  -3.58726   CTGGCTGACACAGAA            GGGGCAGGC CGT ACCTGCCCC            TGTTCCTTTCCCTGA  86 85
 JC965_00895  177214 ..  177231 -  -3.3  -3.76125   TGACCTCAACCTAAA             GCTGCCG CCTC CGGCAAG              GTCAAGGGCGAATGC  53 83
 JC965_00890  176945 ..  176959 -  -2.8   -4.2711   ATAAAAAGAATTAAA               CAGAAT ATT AGTCTG               ATTTATACCAATTAA  61 49
        ansB  175733 ..  175753 - -15.5  -4.44667   TGGCGCAACAAGAAA            GGGCAGGAT CCC ATCCTGCCC            TTCATCTCACGGGGT 100 67
 JC965_00875  173695 ..  173717 - -10.6  -3.88766   ACGCCAGACAGCAAA           GAGCCGGA ACAGATG TCCGGCTC           TTTTCTTTCATGGGG  79 49
 JC965_00855 NONE
 JC965_00850  169567 ..  169595 - -15.9   -3.3164   AATCGATGTGCAGAA        CCCGGGAGGGGCC ATT GGTTCCTCCCGGG        CTCCGTGGTTTTCTG  87 58
        coxB NONE
        ctaD  166489 ..  166520 -  -3.1  -3.14344   CAGTTTTCTGAGCAA     GGGGGCATGACTGAC CTTG GTCA-T-ATGACCCC      CCTAACGCTCTTCCG  43 27
 JC965_00835 NONE
 JC965_00830  164781 ..  164794 -  -3.8  -3.98378   CAGAGTGAACAACAA               GACG AACCAG CGTC                TGTGATGCCATGGTC  58 305
 JC965_00820 NONE
 JC965_00815 NONE
 JC965_00810 NONE
 JC965_00805  161561 ..  161586 - -17.7  -4.07568   CCGTCCCCCTGAAAA         CAAGATGGCCC CTTG GGGCCATCTTG          TTTTGCATCAGGTCT 100 103
 JC965_00765  152560 ..  152583 - -16.8  -3.56092   CCATTATTCTGCAAA          GGCCCGTTAC GAGA GTAACGGGCC           TTTTGTGTTTTCATG  95 359
 JC965_00715  146736 ..  146758 - -12.7  -3.59738   GAGTATATCGGCAAA           GCCCGGCCA TTAAT TGACCGGGC           AATCAAAAGCGAGAT  81 55
 JC965_00710  145036 ..  145047 -  -7.2  -3.28924   GAGGGCCTTCGACAA                CGGG TCAG CCCG                 ACAGATAGGCCAGGG  59 18
 JC965_00705  144095 ..  144110 -  -2.5  -3.53224   CAGCGCGCCCGCAAA              CCACG CGTCTC CATGG               CGCCGCGCCCCCACG  47 230
 JC965_00695 NONE
        pqiB NONE
 JC965_00685  140122 ..  140141 -   -15  -4.88918   CGACCCCAAACAAAA            CGGGAGGC CATG GCCTCCCG             TCTTTTTTTATGCTT 100 43
 JC965_00670  137123 ..  137147 - -20.1  -3.06796   GCTGATGGCATGCAA          GAAGGGCGCTC CTG GAGCGCCCTTC          CCATTTACTGTGGCC 100 48
 JC965_00640  130507 ..  130527 - -18.3  -4.91109   GCCGCACGACAAAAA            GCCCGGGTC ATT GACCCGGGC            TTTTTTATGCTTCGC 100 71
 JC965_00625  127344 ..  127361 - -11.3  -5.25803   AACTGCCATAAAAAA             GGTGAGC CCGG GCTCACC              TTTTTGCGCTCTGCA 100 52
        exeC NONE
        exeD NONE
        exeE NONE
        exeF  114319 ..  114334 -    -9  -3.02166   TCCCTAACGAAATGA              GATGGC ATTA GCCATC               AACGATTAACTGTTA  61 104
        exeG  113806 ..  113827 -  -5.8  -3.02511   GTGACGGGCCGAAGA           GGCCACCT TCATTC AGGCAGCC            CCGGGGTGGCGCAGT  51 63
        exeH  113211 ..  113224 -  -3.1  -2.87132   GGGCCGTCCGACAGA               GCG-GT GCG ACGCGC               TAGAGCGCCCCCTGC  41 55
        exeI NONE
        exeJ NONE
        exeK NONE
        exeL NONE
        exeM NONE
        exeN  108456 ..  108477 - -17.3  -2.96274   GCCCCCATAACGACA           CCACCCCGC CGGG GCGGGGTGG            TTCAAACCATGGGCA  89 47
        tyrS  106019 ..  106029 -  -4.6  -3.75024   CTTCAGCAGCAAGAA                 GGCG ATT CACC                 AGGGGATGCGCCAGG  58 226
 JC965_00510  104037 ..  104055 - -11.7  -3.39327   GCCTGACACGCACAA             GGCCCTC TTCAC GAGGGCC             TTGTCACATCAGCTC  75 77
        nudE  102588 ..  102598 -  -5.4  -3.57144   CCTCTGATTGCCAAA                 CAGA CCC TCTG                 CGGGCTAATTTCCCT  56 30
        cysQ  101689 ..  101722 - -24.1  -3.29649   AGTGGATCACACCAA     TGCAATCAGGCGACC CTGT GGTCGCCTGATTGCA      TTCCCTGCGAGCTGG 100 49
 JC965_00490  100012 ..  100046 -   -23  -3.50893   AACCAGAGAGCAGAA     GCAAGAGAGGCGACCC CCG GGGTCGCCTCTCTTGT     TTGATGCTGACGGCC 100 45
        metB NONE
 JC965_00465   94538 ..   94563 - -19.1  -3.23393   CGCCACCCGATAACA         GAAGAGGCGCC CTGG GGCGCCTCTTC          TCATTGCATCGTGTC  95 49
 JC965_00450   92190 ..   92213 -  -5.2  -3.53012   CCGCCGCCCTGCAAA          CCGGGGT-CGC AGA ACGGACCCTGG          CCGCCCACCCGCAGC  53 244
 JC965_00430 NONE
 JC965_00425   87968 ..   87996 -  -4.4  -4.10453   CAAAGTCGTTGAAAA        GGGCGGCGCC GGACAGGGA GGCCTCGCCC        CCCTCATTGCAACGT  61 41
 JC965_00420   87138 ..   87159 - -15.9  -5.10665   ACTGAACAAACAAAA           GAGGCGCCA TGAC TGGCGCCTC            TTGCGTCTGGATGTC 100 121
 JC965_00410   84933 ..   84983 - -10.7  -5.53288   TCTAAGGGAAAAAAA CATC-CACAAC-AAACAGGGCGCCA TGA TGGCGCCCTGTTTTATTTCGCGATA TGGCCTCTCATCAGG 100 36
        argC   79574 ..   79584 -  -8.2  -2.93381   TAAAGCGTTAAATCA                 GGCC GGT GGCC                 GGTTCAAAACCAAAC  58 7
        argB   78728 ..   78738 -  -5.4  -3.28924   CACTGTCTTTCAGAA                 GATG TTG CATC                 GGATTGTCCTTTTCC  52 50
 JC965_00385 NONE
 JC965_00380   76485 ..   76503 -   -16  -4.07568   TCTTTGCCTGTAAAA             GAGGGGGC CAT GCCCCCTC             GAATCAACGGGTGAT 100 50
        argH   74885 ..   74904 - -13.6  -5.60993   GTGCCCATAAAAAAA            CGGCAACC CTGG GGTTGCCG             TTCTGCCTTCTTGTT 100 61
 JC965_00365 NONE
 JC965_00360 NONE
 JC965_00355   72491 ..   72504 -  -3.8  -3.74693   GTTCATTGCAGCAAA               TGGC CGCAAT GCCA                CATCATCATCCACAA  55 134
 JC965_00350   71692 ..   71711 - -13.6  -4.81083   TGGAACCATGAAAAA            CGGCAACC AGAC GGTTGCCG             TTTTTGTCGGGCCGA 100 57
 JC965_00295   61566 ..   61581 - -11.8  -4.41047   ACGCGGCAATGAAAA              GGGCCC CGCA GGGCCC               TGATGATAGTGGATG  91 63
 JC965_00290   59225 ..   59245 -   -14  -4.35483   CGGCACCACAACAAA            GAGCCCGC ACGGG GCGGGCTC            TTGATGGCAACAAGG 100 50
 JC965_00285   58340 ..   58368 - -15.4  -3.78934   CTGCTGGGAGAATAA       GCAGAAGGGGCGC CATG GCGCCCCTTCT-C        GTTGACGAGAGGCTT  95 53
 JC965_00265 NONE
 JC965_00260   51867 ..   51883 - -11.5  -5.20216   CACACCATGAAAAAA              GGCCGCC TCT GGCGACC              TTTCATCCTGTTGAC 100 52
        nudC NONE
        hemE   49718 ..   49735 - -14.1   -4.3586   TCACGGACAGCAAAA             CGGGGCC CGCA GGCCCCG              TTCATCACGCTGTTT 100 48
 JC965_00245 NONE
         epd NONE
 JC965_00235   46350 ..   46379 - -15.7   -4.0162   CGGCCACATGATAAA       CGAAACGGGAGGC TTTT GCCCCCCGTCCCG        GGTCAATTAGGCTTT 100 32
        fbaA   45140 ..   45170 - -14.9  -4.10164   TCAGGATCACAGAAA      TGCAAAAGGCGCCC CGAA GGGCGCCTTTT-CA       TGCAATCAAGGTGCT 100 46
 JC965_00225   43344 ..   43361 -  -4.8  -2.52676   TATGGCTGCAACGCA             GGTCCC GGTGAA GAGACC              ATCCAGAGCCAGGTC  43 400
 JC965_00205   40147 ..   40165 -  -6.7  -2.70932   CGTCGGGCTCAACCA            CATGGGCC CCCT GGCCC-TG             TTCTTCTCGGTGGTC  49 408
 JC965_00195   38941 ..   38992 -   -18  -2.90075   TGCTGCCCAAGGACA CCGAGGCCGACGCCCGCTTCC-GCC TCA AGCTGGAAGAGGGCTCCAGCCTCAG TCTGCAACCCCTGCC  90 67
 JC965_00185 NONE
 JC965_00180   37243 ..   37258 - -11.8  -2.62184   CCCTCCCCCAGATGA              CCCCGC CCAG GCGGGG               TCATCTGCTATGAGC  70 69
        rpoE NONE
 JC965_00165 NONE
 JC965_00160 NONE
 JC965_00155   32594 ..   32647 -  -7.4  -3.51934   CGGGCCCCACAAATA GCGCCTGGTCTGGCGG-GCGT TGGGCACCTGGAT GCCCTCCGCCAGACCAGGCCC CTCAAGAGAGATGAC  61 27
        lepA NONE
        lepB NONE
         rnc   29069 ..   29079 -  -2.4   -3.6993   GATGGAGTGAAAAGA                 GCGC ACA GTGC                 CGGATCCGTCATGGT  48 43
         era NONE
        recO   27385 ..   27412 -  -3.4  -3.73224   TTATTGTTCATGAAA        GGCGATGTCATA AACA CAAAACATCACC         AGATAATAAAAATCA  53 38
        pdxJ   26478 ..   26507 - -22.3  -4.09685   TTCCACTCCTGAAAA       CCACAAGGGACGC CGAA GCGTCCCTTGTGG        TTTTCATACCTGCGA 100 48
        rlmD   20446 ..   20459 -  -5.9  -3.53444   TCACTCCCGCTCAAA               CAGCG CTGT CGCCG                CTGGAAAACCAAGAT  56 172
        relA   18016 ..   18036 -   -14  -2.80791   GAGGGAGAAAATGCA            GACCGGCC ACTGG GGCCGGTC            GGTTGAGCATTACAG  79 35
        mazG NONE
        pyrG   15259 ..   15285 - -11.5  -5.46629   AATATGCCAAAAAAA         GCGGCTGTGGC ACAGG GCCCCAACCGC         ATTTATTTTCAATTA 100 38
         eno   13860 ..   13879 - -16.4  -4.93365   GCGCAGAACGAAAAA            GCCCCGCC AGAT GGCGGGGC             TTTGTGAAGCATGAA 100 53
        ftsB NONE
        ispD   12672 ..   12693 -  -3.7  -4.25104   TCTGTCTCATCAAAA           CCATG-TCCG GTG CGGATCATGC           CTGCTCCTCTGGGGA  63 20
        ispF NONE
        truD NONE
        surE   10333 ..   10354 -  -2.9  -3.09327   TCAGTTGATTCAACA           GGCGCTGTA CTAT CACAACGTC            ATCCCTGCAGATCCA  43 24
 JC965_00055 NONE
 JC965_00050 NONE
 JC965_00045    8059 ..    8072 -  -6.7  -3.22114   TACACCAGAGTAAGA               CTCAG CTCT CTGAG                TTAACGCTTTGGCAA  56 26
        rpoS    6996 ..    7010 - -12.8  -4.98911   CACGACAAAAAGAAA               GGGGCC TGC GGCCCC               TTTTTCATCTTGATG 100 58
        rpsU NONE
 JC965_00025    5047 ..    5073 - -10.9  -5.69793   ATAGGAAATAAAAAA        GCCGCGCATTCC AATG GGAA-GCACGGC         TTCTTCGACCAAACA 100 54
 JC965_00020    3123 ..    3136 -  -2.3  -2.97475   TCGGTCATGAGAAAC               CCCTG CCCG CAGTG                TTGTCGGGGCCAGGT   0 114
