locus-tag class description NRL19_00005 PF00308 Bacterial dnaA protein NRL19_00005 PF08299 Bacterial dnaA protein helix-turn-helix NRL19_00005 PF11638 DnaA N-terminal domain NRL19_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NRL19_00010 PF02767 DNA polymerase III beta subunit, central domain NRL19_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NRL19_00015 PF02463 RecF/RecN/SMC N terminal domain NRL19_00020 PF01751 Toprim domain NRL19_00020 PF18053 DNA gyrase B subunit insert domain NRL19_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_00020 PF00204 DNA gyrase B NRL19_00020 PF00986 DNA gyrase B subunit, carboxyl terminus NRL19_00025 PF02311 AraC-like ligand binding domain NRL19_00025 PF12833 Helix-turn-helix domain NRL19_00030 PF12706 Beta-lactamase superfamily domain NRL19_00035 PF00011 Hsp20/alpha crystallin family NRL19_00040 PF00011 Hsp20/alpha crystallin family NRL19_00045 PF00155 Aminotransferase class I and II NRL19_00050 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_00050 PF01610 Transposase NRL19_00050 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_00065 PF07690 Major Facilitator Superfamily NRL19_00070 PF00072 Response regulator receiver domain NRL19_00070 PF00486 Transcriptional regulatory protein, C terminal NRL19_00075 PF13493 Domain of unknown function (DUF4118) NRL19_00075 PF13492 GAF domain NRL19_00075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_00075 PF00512 His Kinase A (phospho-acceptor) domain NRL19_00075 PF02702 Osmosensitive K+ channel His kinase sensor domain NRL19_00080 PF02669 K+-transporting ATPase, c chain NRL19_00090 PF03814 Potassium-transporting ATPase A subunit NRL19_00095 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRL19_00095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRL19_00100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_00100 PF00512 His Kinase A (phospho-acceptor) domain NRL19_00100 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRL19_00105 PF00873 AcrB/AcrD/AcrF family NRL19_00110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRL19_00115 PF00440 Bacterial regulatory proteins, tetR family NRL19_00150 PF12146 Serine aminopeptidase, S33 NRL19_00155 PF12105 SpoU, rRNA methylase, C-terminal NRL19_00155 PF00588 SpoU rRNA Methylase family NRL19_00160 PF13291 ACT domain NRL19_00160 PF04607 Region found in RelA / SpoT proteins NRL19_00160 PF02824 TGS domain NRL19_00165 PF01192 RNA polymerase Rpb6 NRL19_00170 PF00625 Guanylate kinase NRL19_00175 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NRL19_00190 PF00892 EamA-like transporter family NRL19_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_00210 PF03466 LysR substrate binding domain NRL19_00215 PF00579 tRNA synthetases class I (W and Y) NRL19_00220 PF00582 Universal stress protein family NRL19_00225 PF07055 Enoyl reductase FAD binding domain NRL19_00225 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NRL19_00225 PF12241 Trans-2-enoyl-CoA reductase catalytic region NRL19_00230 PF00990 Diguanylate cyclase, GGDEF domain NRL19_00230 PF05230 MASE2 domain NRL19_00235 PF00210 Ferritin-like domain NRL19_00245 PF07690 Major Facilitator Superfamily NRL19_00250 PF01810 LysE type translocator NRL19_00270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_00270 PF00512 His Kinase A (phospho-acceptor) domain NRL19_00270 PF01627 Hpt domain NRL19_00270 PF00989 PAS fold NRL19_00270 PF00072 Response regulator receiver domain NRL19_00270 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRL19_00280 PF07694 5TMR of 5TMR-LYT NRL19_00280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_00280 PF06580 Histidine kinase NRL19_00285 PF04397 LytTr DNA-binding domain NRL19_00285 PF00072 Response regulator receiver domain NRL19_00290 PF07690 Major Facilitator Superfamily NRL19_00295 PF02222 ATP-grasp domain NRL19_00295 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NRL19_00300 PF00731 AIR carboxylase NRL19_00315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_00315 PF03466 LysR substrate binding domain NRL19_00320 PF07715 TonB-dependent Receptor Plug Domain NRL19_00320 PF00593 TonB dependent receptor NRL19_00325 PF01177 Asp/Glu/Hydantoin racemase NRL19_00360 PF00583 Acetyltransferase (GNAT) family NRL19_00360 PF13380 CoA binding domain NRL19_00360 PF13607 Succinyl-CoA ligase like flavodoxin domain NRL19_00370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_00370 PF03466 LysR substrate binding domain NRL19_00375 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NRL19_00375 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NRL19_00380 PF00342 Phosphoglucose isomerase NRL19_00390 PF00924 Mechanosensitive ion channel NRL19_00390 PF05552 Conserved TM helix NRL19_00405 PF00440 Bacterial regulatory proteins, tetR family NRL19_00410 PF00692 dUTPase NRL19_00415 PF04127 DNA / pantothenate metabolism flavoprotein NRL19_00415 PF02441 Flavoprotein NRL19_00420 PF04002 RadC-like JAB domain NRL19_00425 PF00830 Ribosomal L28 family NRL19_00430 PF00471 Ribosomal protein L33 NRL19_00440 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NRL19_00440 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NRL19_00440 PF06827 Zinc finger found in FPG and IleRS NRL19_00445 PF04393 Protein of unknown function (DUF535) NRL19_00450 PF01467 Cytidylyltransferase-like NRL19_00455 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NRL19_00460 PF00535 Glycosyl transferase family 2 NRL19_00465 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NRL19_00470 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NRL19_00480 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_00480 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_00480 PF01610 Transposase NRL19_00485 PF03755 YicC-like family, N-terminal region NRL19_00485 PF08340 Domain of unknown function (DUF1732) NRL19_00490 PF03725 3' exoribonuclease family, domain 2 NRL19_00490 PF01138 3' exoribonuclease family, domain 1 NRL19_00495 PF00156 Phosphoribosyl transferase domain NRL19_00500 PF00403 Heavy-metal-associated domain NRL19_00505 PF00376 MerR family regulatory protein NRL19_00505 PF09278 MerR, DNA binding NRL19_00510 PF00360 Phytochrome region NRL19_00510 PF01590 GAF domain NRL19_00510 PF00990 Diguanylate cyclase, GGDEF domain NRL19_00510 PF00563 EAL domain NRL19_00515 PF06288 Protein of unknown function (DUF1040) NRL19_00520 PF13746 4Fe-4S dicluster domain NRL19_00520 PF12801 4Fe-4S binding domain NRL19_00520 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NRL19_00525 PF01636 Phosphotransferase enzyme family NRL19_00530 PF01323 DSBA-like thioredoxin domain NRL19_00535 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_00540 PF00005 ABC transporter NRL19_00550 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NRL19_00550 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NRL19_00555 PF00857 Isochorismatase family NRL19_00565 PF04463 Protein of unknown function (DUF523) NRL19_00570 PF01553 Acyltransferase NRL19_00575 PF01553 Acyltransferase NRL19_00580 PF01078 Magnesium chelatase, subunit ChlI NRL19_00580 PF13335 Magnesium chelatase, subunit ChlI C-terminal NRL19_00585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRL19_00585 PF00205 Thiamine pyrophosphate enzyme, central domain NRL19_00585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NRL19_00595 PF01063 Amino-transferase class IV NRL19_00600 PF00920 Dehydratase family NRL19_00605 PF00291 Pyridoxal-phosphate dependent enzyme NRL19_00605 PF00585 C-terminal regulatory domain of Threonine dehydratase NRL19_00610 PF00691 OmpA family NRL19_00610 PF01389 OmpA-like transmembrane domain NRL19_00620 PF00440 Bacterial regulatory proteins, tetR family NRL19_00625 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NRL19_00625 PF00271 Helicase conserved C-terminal domain NRL19_00625 PF17764 3′ DNA-binding domain (3′BD) NRL19_00625 PF18074 Primosomal protein N C-terminal domain NRL19_00625 PF00270 DEAD/DEAH box helicase NRL19_00630 PF01197 Ribosomal protein L31 NRL19_00635 PF13460 NAD(P)H-binding NRL19_00635 PF11066 Protein of unknown function (DUF2867) NRL19_00640 PF00390 Malic enzyme, N-terminal domain NRL19_00640 PF03949 Malic enzyme, NAD binding domain NRL19_00650 PF00512 His Kinase A (phospho-acceptor) domain NRL19_00650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_00650 PF00672 HAMP domain NRL19_00655 PF00486 Transcriptional regulatory protein, C terminal NRL19_00655 PF00072 Response regulator receiver domain NRL19_00660 PF05958 tRNA (Uracil-5-)-methyltransferase NRL19_00675 PF00128 Alpha amylase, catalytic domain NRL19_00675 PF02903 Alpha amylase, N-terminal ig-like domain NRL19_00690 PF00012 Hsp70 protein NRL19_00695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRL19_00695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRL19_00700 PF05981 CreA protein NRL19_00715 PF01258 Prokaryotic dksA/traR C4-type zinc finger NRL19_00720 PF00120 Glutamine synthetase, catalytic domain NRL19_00725 PF00202 Aminotransferase class-III NRL19_00730 PF13416 Bacterial extracellular solute-binding protein NRL19_00735 PF13416 Bacterial extracellular solute-binding protein NRL19_00740 PF08402 TOBE domain NRL19_00740 PF00005 ABC transporter NRL19_00745 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_00750 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_00755 PF03475 3-alpha domain NRL19_00755 PF03473 MOSC domain NRL19_00770 PF03061 Thioesterase superfamily NRL19_00775 PF00270 DEAD/DEAH box helicase NRL19_00775 PF00271 Helicase conserved C-terminal domain NRL19_00775 PF00570 HRDC domain NRL19_00775 PF09382 RQC domain NRL19_00775 PF16124 RecQ zinc-binding NRL19_00780 PF00034 Cytochrome c NRL19_00785 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NRL19_00795 PF02592 Putative vitamin uptake transporter NRL19_00800 PF13006 Insertion element 4 transposase N-terminal NRL19_00800 PF01609 Transposase DDE domain NRL19_00805 PF03737 Aldolase/RraA NRL19_00810 PF00672 HAMP domain NRL19_00810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_00815 PF00571 CBS domain NRL19_00815 PF01769 Divalent cation transporter NRL19_00815 PF03448 MgtE intracellular N domain NRL19_00820 PF14824 Sirohaem biosynthesis protein central NRL19_00820 PF10414 Sirohaem synthase dimerisation region NRL19_00820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NRL19_00825 PF01226 Formate/nitrite transporter NRL19_00830 PF13806 Rieske-like [2Fe-2S] domain NRL19_00835 PF04324 BFD-like [2Fe-2S] binding domain NRL19_00835 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NRL19_00835 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NRL19_00835 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRL19_00835 PF18267 Rubredoxin NAD+ reductase C-terminal domain NRL19_00850 PF00005 ABC transporter NRL19_00855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRL19_00875 PF10431 C-terminal, D2-small domain, of ClpB protein NRL19_00875 PF07724 AAA domain (Cdc48 subfamily) NRL19_00875 PF00004 ATPase family associated with various cellular activities (AAA) NRL19_00880 PF00227 Proteasome subunit NRL19_00890 PF03485 Arginyl tRNA synthetase N terminal domain NRL19_00890 PF05746 DALR anticodon binding domain NRL19_00890 PF00750 tRNA synthetases class I (R) NRL19_00900 PF04545 Sigma-70, region 4 NRL19_00900 PF04542 Sigma-70 region 2 NRL19_00905 PF12973 ChrR Cupin-like domain NRL19_00910 PF02673 Bacitracin resistance protein BacA NRL19_00915 PF00248 Aldo/keto reductase family NRL19_00920 PF01263 Aldose 1-epimerase NRL19_00925 PF00288 GHMP kinases N terminal domain NRL19_00925 PF08544 GHMP kinases C terminal NRL19_00925 PF10509 Galactokinase galactose-binding signature NRL19_00930 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NRL19_00930 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NRL19_00935 PF16363 GDP-mannose 4,6 dehydratase NRL19_00940 PF00356 Bacterial regulatory proteins, lacI family NRL19_00945 PF16353 Domain of unknown function(DUF4981) NRL19_00945 PF02929 Beta galactosidase small chain NRL19_00945 PF00703 Glycosyl hydrolases family 2 NRL19_00945 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NRL19_00945 PF02837 Glycosyl hydrolases family 2, sugar binding domain NRL19_00950 PF13407 Periplasmic binding protein domain NRL19_00955 PF00005 ABC transporter NRL19_00960 PF02653 Branched-chain amino acid transport system / permease component NRL19_00965 PF02743 Cache domain NRL19_00965 PF00672 HAMP domain NRL19_00965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_00980 PF00696 Amino acid kinase family NRL19_00985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NRL19_00985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NRL19_00990 PF03606 C4-dicarboxylate anaerobic carrier NRL19_00995 PF02863 Arginine repressor, C-terminal domain NRL19_00995 PF01316 Arginine repressor, DNA binding domain NRL19_01000 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain NRL19_01000 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain NRL19_01005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NRL19_01005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NRL19_01030 PF02743 Cache domain NRL19_01030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_01030 PF00672 HAMP domain NRL19_01040 PF08212 Lipocalin-like domain NRL19_01045 PF06719 AraC-type transcriptional regulator N-terminus NRL19_01045 PF12833 Helix-turn-helix domain NRL19_01050 PF00465 Iron-containing alcohol dehydrogenase NRL19_01055 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NRL19_01055 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NRL19_01055 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NRL19_01060 PF02233 NAD(P) transhydrogenase beta subunit NRL19_01065 PF01609 Transposase DDE domain NRL19_01065 PF13006 Insertion element 4 transposase N-terminal NRL19_01075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_01080 PF00486 Transcriptional regulatory protein, C terminal NRL19_01080 PF00072 Response regulator receiver domain NRL19_01095 PF01794 Ferric reductase like transmembrane component NRL19_01100 PF00174 Oxidoreductase molybdopterin binding domain NRL19_01105 PF06496 Protein of unknown function (DUF1097) NRL19_01110 PF00158 Sigma-54 interaction domain NRL19_01110 PF00072 Response regulator receiver domain NRL19_01120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_01120 PF00512 His Kinase A (phospho-acceptor) domain NRL19_01140 PF00571 CBS domain NRL19_01140 PF00478 IMP dehydrogenase / GMP reductase domain NRL19_01150 PF01037 Lrp/AsnC ligand binding domain NRL19_01155 PF03590 Aspartate-ammonia ligase NRL19_01165 PF07724 AAA domain (Cdc48 subfamily) NRL19_01165 PF17871 AAA lid domain NRL19_01165 PF02861 Clp amino terminal domain, pathogenicity island component NRL19_01165 PF10431 C-terminal, D2-small domain, of ClpB protein NRL19_01165 PF00004 ATPase family associated with various cellular activities (AAA) NRL19_01170 PF02578 Multi-copper polyphenol oxidoreductase laccase NRL19_01175 PF01479 S4 domain NRL19_01175 PF00849 RNA pseudouridylate synthase NRL19_01180 PF13525 Outer membrane lipoprotein NRL19_01185 PF03313 Serine dehydratase alpha chain NRL19_01190 PF13309 HTH domain NRL19_01190 PF08348 YheO-like PAS domain NRL19_01200 PF01609 Transposase DDE domain NRL19_01210 PF00384 Molybdopterin oxidoreductase NRL19_01210 PF01568 Molydopterin dinucleotide binding domain NRL19_01210 PF18364 Molybdopterin oxidoreductase N-terminal domain NRL19_01215 PF03264 NapC/NirT cytochrome c family, N-terminal region NRL19_01220 PF01751 Toprim domain NRL19_01220 PF01131 DNA topoisomerase NRL19_01225 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_01225 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_01225 PF01610 Transposase NRL19_01240 PF12852 Cupin NRL19_01240 PF12833 Helix-turn-helix domain NRL19_01245 PF02386 Cation transport protein NRL19_01250 PF02254 TrkA-N domain NRL19_01250 PF02080 TrkA-C domain NRL19_01255 PF01565 FAD binding domain NRL19_01255 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NRL19_01260 PF02237 Biotin protein ligase C terminal domain NRL19_01260 PF03099 Biotin/lipoate A/B protein ligase family NRL19_01260 PF08279 HTH domain NRL19_01265 PF00485 Phosphoribulokinase / Uridine kinase family NRL19_01280 PF00009 Elongation factor Tu GTP binding domain NRL19_01280 PF03144 Elongation factor Tu domain 2 NRL19_01280 PF03143 Elongation factor Tu C-terminal domain NRL19_01290 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NRL19_01295 PF00467 KOW motif NRL19_01295 PF02357 Transcription termination factor nusG NRL19_01300 PF00298 Ribosomal protein L11, RNA binding domain NRL19_01300 PF03946 Ribosomal protein L11, N-terminal domain NRL19_01305 PF00687 Ribosomal protein L1p/L10e family NRL19_01310 PF00466 Ribosomal protein L10 NRL19_01315 PF16320 Ribosomal protein L7/L12 dimerisation domain NRL19_01315 PF00542 Ribosomal protein L7/L12 C-terminal domain NRL19_01320 PF04565 RNA polymerase Rpb2, domain 3 NRL19_01320 PF04560 RNA polymerase Rpb2, domain 7 NRL19_01320 PF04563 RNA polymerase beta subunit NRL19_01320 PF00562 RNA polymerase Rpb2, domain 6 NRL19_01320 PF10385 RNA polymerase beta subunit external 1 domain NRL19_01320 PF04561 RNA polymerase Rpb2, domain 2 NRL19_01325 PF00623 RNA polymerase Rpb1, domain 2 NRL19_01325 PF04997 RNA polymerase Rpb1, domain 1 NRL19_01325 PF04998 RNA polymerase Rpb1, domain 5 NRL19_01325 PF04983 RNA polymerase Rpb1, domain 3 NRL19_01325 PF05000 RNA polymerase Rpb1, domain 4 NRL19_01330 PF13309 HTH domain NRL19_01330 PF08348 YheO-like PAS domain NRL19_01335 PF01042 Endoribonuclease L-PSP NRL19_01340 PF02635 DsrE/DsrF-like family NRL19_01345 PF02635 DsrE/DsrF-like family NRL19_01350 PF04077 DsrH like protein NRL19_01355 PF00164 Ribosomal protein S12/S23 NRL19_01360 PF00177 Ribosomal protein S7p/S5e NRL19_01365 PF03764 Elongation factor G, domain IV NRL19_01365 PF00679 Elongation factor G C-terminus NRL19_01365 PF14492 Elongation Factor G, domain II NRL19_01365 PF00009 Elongation factor Tu GTP binding domain NRL19_01365 PF03144 Elongation factor Tu domain 2 NRL19_01370 PF03144 Elongation factor Tu domain 2 NRL19_01370 PF00009 Elongation factor Tu GTP binding domain NRL19_01370 PF03143 Elongation factor Tu C-terminal domain NRL19_01410 PF03079 ARD/ARD' family NRL19_01420 PF00860 Permease family NRL19_01425 PF02733 Dak1 domain NRL19_01430 PF02734 DAK2 domain NRL19_01435 PF00381 PTS HPr component phosphorylation site NRL19_01435 PF03610 PTS system fructose IIA component NRL19_01435 PF05524 PEP-utilising enzyme, N-terminal NRL19_01435 PF00391 PEP-utilising enzyme, mobile domain NRL19_01440 PF00989 PAS fold NRL19_01440 PF02954 Bacterial regulatory protein, Fis family NRL19_01440 PF00158 Sigma-54 interaction domain NRL19_01445 PF03466 LysR substrate binding domain NRL19_01445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_01450 PF04371 Porphyromonas-type peptidyl-arginine deiminase NRL19_01455 PF00795 Carbon-nitrogen hydrolase NRL19_01460 PF13416 Bacterial extracellular solute-binding protein NRL19_01465 PF04371 Porphyromonas-type peptidyl-arginine deiminase NRL19_01470 PF00106 short chain dehydrogenase NRL19_01475 PF01594 AI-2E family transporter NRL19_01480 PF00293 NUDIX domain NRL19_01500 PF00199 Catalase NRL19_01500 PF06628 Catalase-related immune-responsive NRL19_01505 PF00583 Acetyltransferase (GNAT) family NRL19_01525 PF00990 Diguanylate cyclase, GGDEF domain NRL19_01525 PF00072 Response regulator receiver domain NRL19_01535 PF08402 TOBE domain NRL19_01535 PF00005 ABC transporter NRL19_01545 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_01560 PF00392 Bacterial regulatory proteins, gntR family NRL19_01560 PF07702 UTRA domain NRL19_01570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_01570 PF03466 LysR substrate binding domain NRL19_01580 PF17954 Quercetinase C-terminal cupin domain NRL19_01580 PF02678 Pirin NRL19_01585 PF07681 DoxX NRL19_01590 PF17946 RecC C-terminal domain NRL19_01595 PF12705 PD-(D/E)XK nuclease superfamily NRL19_01595 PF13361 UvrD-like helicase C-terminal domain NRL19_01595 PF00580 UvrD/REP helicase N-terminal domain NRL19_01600 PF13538 UvrD-like helicase C-terminal domain NRL19_01605 PF17092 Penicillin-binding protein OB-like domain NRL19_01605 PF00912 Transglycosylase NRL19_01605 PF00905 Penicillin binding protein transpeptidase domain NRL19_01610 PF01609 Transposase DDE domain NRL19_01630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRL19_01640 PF00909 Ammonium Transporter Family NRL19_01645 PF00543 Nitrogen regulatory protein P-II NRL19_01650 PF00990 Diguanylate cyclase, GGDEF domain NRL19_01650 PF08448 PAS fold NRL19_01660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_01660 PF00672 HAMP domain NRL19_01670 PF00486 Transcriptional regulatory protein, C terminal NRL19_01670 PF00072 Response regulator receiver domain NRL19_01675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_01675 PF00672 HAMP domain NRL19_01675 PF00512 His Kinase A (phospho-acceptor) domain NRL19_01680 PF00313 'Cold-shock' DNA-binding domain NRL19_01700 PF00436 Single-strand binding protein family NRL19_01705 PF00196 Bacterial regulatory proteins, luxR family NRL19_01710 PF00005 ABC transporter NRL19_01710 PF17755 UvrA DNA-binding domain NRL19_01710 PF17760 UvrA interaction domain NRL19_01715 PF01609 Transposase DDE domain NRL19_01715 PF13808 DDE_Tnp_1-associated NRL19_01720 PF03922 OmpW family NRL19_01725 PF12729 Four helix bundle sensory module for signal transduction NRL19_01725 PF00672 HAMP domain NRL19_01725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_01740 PF02219 Methylenetetrahydrofolate reductase NRL19_01750 PF03594 Benzoate membrane transport protein NRL19_01755 PF01381 Helix-turn-helix NRL19_01755 PF07883 Cupin domain NRL19_01790 PF04363 Protein of unknown function (DUF496) NRL19_01800 PF04751 Protein of unknown function (DUF615) NRL19_01805 PF01523 Putative modulator of DNA gyrase NRL19_01820 PF07719 Tetratricopeptide repeat NRL19_01820 PF07219 HemY protein N-terminus NRL19_01825 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase NRL19_01830 PF02602 Uroporphyrinogen-III synthase HemD NRL19_01835 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NRL19_01835 PF03900 Porphobilinogen deaminase, C-terminal domain NRL19_01840 PF12633 Adenylate cyclase NT domain NRL19_01840 PF01295 Adenylate cyclase, class-I NRL19_01845 PF02230 Phospholipase/Carboxylesterase NRL19_01850 PF01491 Frataxin-like domain NRL19_01860 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NRL19_01860 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NRL19_01865 PF01678 Diaminopimelate epimerase NRL19_01875 PF00589 Phage integrase family NRL19_01875 PF02899 Phage integrase, N-terminal SAM-like domain NRL19_01880 PF13419 Haloacid dehalogenase-like hydrolase NRL19_01890 PF07722 Peptidase C26 NRL19_01905 PF04307 LexA-binding, inner membrane-associated putative hydrolase NRL19_01910 PF02464 Competence-damaged protein NRL19_01910 PF00994 Probable molybdopterin binding domain NRL19_01920 PF04204 Homoserine O-succinyltransferase NRL19_01930 PF01037 Lrp/AsnC ligand binding domain NRL19_01935 PF00884 Sulfatase NRL19_01945 PF00128 Alpha amylase, catalytic domain NRL19_01945 PF02903 Alpha amylase, N-terminal ig-like domain NRL19_01945 PF16657 Maltogenic Amylase, C-terminal domain NRL19_01950 PF02308 MgtC family NRL19_01970 PF00106 short chain dehydrogenase NRL19_01985 PF00465 Iron-containing alcohol dehydrogenase NRL19_01995 PF01053 Cys/Met metabolism PLP-dependent enzyme NRL19_02005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRL19_02005 PF12793 Sugar transport-related sRNA regulator N-term NRL19_02025 PF00561 alpha/beta hydrolase fold NRL19_02035 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NRL19_02035 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NRL19_02040 PF02698 DUF218 domain NRL19_02045 PF08453 Peptidase family M9 N-terminal NRL19_02045 PF01752 Collagenase NRL19_02050 PF13193 AMP-binding enzyme C-terminal domain NRL19_02050 PF00501 AMP-binding enzyme NRL19_02055 PF13378 Enolase C-terminal domain-like NRL19_02060 PF00378 Enoyl-CoA hydratase/isomerase NRL19_02065 PF12697 Alpha/beta hydrolase family NRL19_02070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRL19_02070 PF16582 Middle domain of thiamine pyrophosphate NRL19_02070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NRL19_02075 PF00425 chorismate binding enzyme NRL19_02080 PF01040 UbiA prenyltransferase family NRL19_02100 PF03880 DbpA RNA binding domain NRL19_02100 PF00270 DEAD/DEAH box helicase NRL19_02100 PF00271 Helicase conserved C-terminal domain NRL19_02105 PF01773 Na+ dependent nucleoside transporter N-terminus NRL19_02105 PF07662 Na+ dependent nucleoside transporter C-terminus NRL19_02105 PF07670 Nucleoside recognition NRL19_02120 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NRL19_02125 PF01544 CorA-like Mg2+ transporter protein NRL19_02140 PF03471 Transporter associated domain NRL19_02140 PF00999 Sodium/hydrogen exchanger family NRL19_02140 PF02080 TrkA-C domain NRL19_02145 PF05068 Mannitol repressor NRL19_02150 PF08125 Mannitol dehydrogenase C-terminal domain NRL19_02150 PF01232 Mannitol dehydrogenase Rossmann domain NRL19_02155 PF02378 Phosphotransferase system, EIIC NRL19_02155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRL19_02155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRL19_02160 PF17876 Cold shock domain NRL19_02160 PF08206 Ribonuclease B OB domain NRL19_02160 PF00773 RNB domain NRL19_02165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_02165 PF03466 LysR substrate binding domain NRL19_02170 PF00765 Autoinducer synthase NRL19_02175 PF00196 Bacterial regulatory proteins, luxR family NRL19_02175 PF03472 Autoinducer binding domain NRL19_02180 PF01810 LysE type translocator NRL19_02185 PF02872 5'-nucleotidase, C-terminal domain NRL19_02185 PF00149 Calcineurin-like phosphoesterase NRL19_02190 PF03279 Bacterial lipid A biosynthesis acyltransferase NRL19_02195 PF01467 Cytidylyltransferase-like NRL19_02195 PF00294 pfkB family carbohydrate kinase NRL19_02200 PF02321 Outer membrane efflux protein NRL19_02205 PF00293 NUDIX domain NRL19_02210 PF06853 Protein of unknown function (DUF1249) NRL19_02215 PF00149 Calcineurin-like phosphoesterase NRL19_02220 PF05728 Uncharacterised protein family (UPF0227) NRL19_02225 PF00293 NUDIX domain NRL19_02235 PF07869 Protein of unknown function (DUF1656) NRL19_02240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRL19_02240 PF00529 HlyD membrane-fusion protein of T1SS NRL19_02245 PF04632 Fusaric acid resistance protein family NRL19_02250 PF01751 Toprim domain NRL19_02250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_02250 PF00986 DNA gyrase B subunit, carboxyl terminus NRL19_02250 PF00204 DNA gyrase B NRL19_02255 PF00521 DNA gyrase/topoisomerase IV, subunit A NRL19_02255 PF03989 DNA gyrase C-terminal domain, beta-propeller NRL19_02265 PF13808 DDE_Tnp_1-associated NRL19_02265 PF01609 Transposase DDE domain NRL19_02305 PF01556 DnaJ C terminal domain NRL19_02305 PF00226 DnaJ domain NRL19_02305 PF00684 DnaJ central domain NRL19_02315 PF00578 AhpC/TSA family NRL19_02335 PF01553 Acyltransferase NRL19_02340 PF04012 PspA/IM30 family NRL19_02355 PF01541 GIY-YIG catalytic domain NRL19_02360 PF00892 EamA-like transporter family NRL19_02365 PF03167 Uracil DNA glycosylase superfamily NRL19_02375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_02375 PF03466 LysR substrate binding domain NRL19_02380 PF00950 ABC 3 transport family NRL19_02385 PF00005 ABC transporter NRL19_02390 PF01297 Zinc-uptake complex component A periplasmic NRL19_02410 PF01476 LysM domain NRL19_02410 PF08525 Opacity-associated protein A N-terminal motif NRL19_02410 PF01551 Peptidase family M23 NRL19_02415 PF13006 Insertion element 4 transposase N-terminal NRL19_02415 PF01609 Transposase DDE domain NRL19_02420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRL19_02425 PF04222 Protein of unknown function (DUF416) NRL19_02430 PF01610 Transposase NRL19_02430 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_02430 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_02455 PF00892 EamA-like transporter family NRL19_02460 PF01037 Lrp/AsnC ligand binding domain NRL19_02465 PF12464 Maltose acetyltransferase NRL19_02465 PF14602 Hexapeptide repeat of succinyl-transferase NRL19_02470 PF11941 Domain of unknown function (DUF3459) NRL19_02470 PF00128 Alpha amylase, catalytic domain NRL19_02475 PF02378 Phosphotransferase system, EIIC NRL19_02475 PF00367 phosphotransferase system, EIIB NRL19_02480 PF00356 Bacterial regulatory proteins, lacI family NRL19_02495 PF17763 Glutaminase/Asparaginase C-terminal domain NRL19_02495 PF00710 Asparaginase, N-terminal NRL19_02510 PF02142 MGS-like domain NRL19_02515 PF00210 Ferritin-like domain NRL19_02530 PF17176 tRNA-binding domain NRL19_02530 PF08351 Domain of unknown function (DUF1726) NRL19_02530 PF13718 GNAT acetyltransferase 2 NRL19_02530 PF05127 Helicase NRL19_02535 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NRL19_02535 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NRL19_02540 PF00115 Cytochrome C and Quinol oxidase polypeptide I NRL19_02545 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NRL19_02550 PF00510 Cytochrome c oxidase subunit III NRL19_02575 PF01040 UbiA prenyltransferase family NRL19_02595 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_02600 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_02605 PF08402 TOBE domain NRL19_02605 PF00005 ABC transporter NRL19_02610 PF13416 Bacterial extracellular solute-binding protein NRL19_02615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_02615 PF03466 LysR substrate binding domain NRL19_02620 PF03553 Na+/H+ antiporter family NRL19_02655 PF00534 Glycosyl transferases group 1 NRL19_02655 PF08323 Starch synthase catalytic domain NRL19_02665 PF08468 Methyltransferase small domain N-terminal NRL19_02665 PF05175 Methyltransferase small domain NRL19_02670 PF00701 Dihydrodipicolinate synthetase family NRL19_02675 PF00360 Phytochrome region NRL19_02675 PF00990 Diguanylate cyclase, GGDEF domain NRL19_02675 PF01590 GAF domain NRL19_02675 PF00563 EAL domain NRL19_02680 PF13419 Haloacid dehalogenase-like hydrolase NRL19_02685 PF17209 Hfq protein NRL19_02690 PF04403 Paraquat-inducible protein A NRL19_02695 PF02470 MlaD protein NRL19_02700 PF03886 ABC-type transport auxiliary lipoprotein component NRL19_02705 PF01389 OmpA-like transmembrane domain NRL19_02705 PF00691 OmpA family NRL19_02710 PF00657 GDSL-like Lipase/Acylhydrolase NRL19_02720 PF01464 Transglycosylase SLT domain NRL19_02720 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NRL19_02725 PF04362 Bacterial Fe(2+) trafficking NRL19_02730 PF00730 HhH-GPD superfamily base excision DNA repair protein NRL19_02730 PF10576 Iron-sulfur binding domain of endonuclease III NRL19_02730 PF00633 Helix-hairpin-helix motif NRL19_02730 PF14815 NUDIX domain NRL19_02735 PF16537 Type II secretion system protein B NRL19_02740 PF01471 Putative peptidoglycan binding domain NRL19_02740 PF13401 AAA domain NRL19_02745 PF12627 Probable RNA and SrmB- binding site of polymerase A NRL19_02745 PF01966 HD domain NRL19_02745 PF01743 Poly A polymerase head domain NRL19_02750 PF01384 Phosphate transporter family NRL19_02755 PF01865 Protein of unknown function DUF47 NRL19_02760 PF01928 CYTH domain NRL19_02765 PF05433 Glycine zipper 2TM domain NRL19_02775 PF01321 Creatinase/Prolidase N-terminal domain NRL19_02775 PF00557 Metallopeptidase family M24 NRL19_02780 PF00392 Bacterial regulatory proteins, gntR family NRL19_02785 PF01293 Phosphoenolpyruvate carboxykinase NRL19_02790 PF01430 Hsp33 protein NRL19_02795 PF01479 S4 domain NRL19_02800 PF11356 Type II secretion system protein C NRL19_02805 PF00263 Bacterial type II and III secretion system protein NRL19_02805 PF03958 Bacterial type II/III secretion system short domain NRL19_02810 PF00437 Type II/IV secretion system protein NRL19_02815 PF00482 Type II secretion system (T2SS), protein F NRL19_02820 PF08334 Type II secretion system (T2SS), protein G NRL19_02820 PF07963 Prokaryotic N-terminal methylation motif NRL19_02825 PF07963 Prokaryotic N-terminal methylation motif NRL19_02825 PF12019 Type II transport protein GspH NRL19_02830 PF07963 Prokaryotic N-terminal methylation motif NRL19_02830 PF02501 Type II secretion system (T2SS), protein I NRL19_02835 PF07963 Prokaryotic N-terminal methylation motif NRL19_02835 PF11612 Type II secretion system (T2SS), protein J NRL19_02845 PF03934 Type II secretion system (T2SS), protein K NRL19_02850 PF12693 GspL periplasmic domain NRL19_02850 PF05134 Type II secretion system (T2SS), protein L NRL19_02855 PF04612 Type II secretion system (T2SS), protein M NRL19_02860 PF01203 Type II secretion system (T2SS), protein N NRL19_02865 PF00196 Bacterial regulatory proteins, luxR family NRL19_02870 PF01479 S4 domain NRL19_02870 PF00579 tRNA synthetases class I (W and Y) NRL19_02875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_02875 PF03466 LysR substrate binding domain NRL19_02880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRL19_02885 PF13419 Haloacid dehalogenase-like hydrolase NRL19_02890 PF00293 NUDIX domain NRL19_02895 PF00459 Inositol monophosphatase family NRL19_02900 PF03222 Tryptophan/tyrosine permease family NRL19_02905 PF01588 Putative tRNA binding domain NRL19_02910 PF02311 AraC-like ligand binding domain NRL19_02910 PF12833 Helix-turn-helix domain NRL19_02915 PF01340 Met Apo-repressor, MetJ NRL19_02920 PF01053 Cys/Met metabolism PLP-dependent enzyme NRL19_02925 PF00696 Amino acid kinase family NRL19_02925 PF03447 Homoserine dehydrogenase, NAD binding domain NRL19_02925 PF00742 Homoserine dehydrogenase NRL19_02930 PF04172 LrgB-like family NRL19_02935 PF03788 LrgA family NRL19_02940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_02940 PF03466 LysR substrate binding domain NRL19_02955 PF00155 Aminotransferase class I and II NRL19_02955 PF00392 Bacterial regulatory proteins, gntR family NRL19_02975 PF04073 Aminoacyl-tRNA editing domain NRL19_02980 PF00563 EAL domain NRL19_02980 PF00990 Diguanylate cyclase, GGDEF domain NRL19_02980 PF05231 MASE1 NRL19_02980 PF08447 PAS fold NRL19_02980 PF08448 PAS fold NRL19_02980 PF13426 PAS domain NRL19_02985 PF00311 Phosphoenolpyruvate carboxylase NRL19_02990 PF01546 Peptidase family M20/M25/M40 NRL19_02990 PF07687 Peptidase dimerisation domain NRL19_02995 PF02774 Semialdehyde dehydrogenase, dimerisation domain NRL19_02995 PF01118 Semialdehyde dehydrogenase, NAD binding domain NRL19_03000 PF00696 Amino acid kinase family NRL19_03005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NRL19_03005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NRL19_03010 PF00764 Arginosuccinate synthase NRL19_03015 PF14698 Argininosuccinate lyase C-terminal NRL19_03015 PF00206 Lyase NRL19_03020 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_03020 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_03020 PF01610 Transposase NRL19_03025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_03025 PF03466 LysR substrate binding domain NRL19_03035 PF14552 Tautomerase enzyme NRL19_03065 PF14602 Hexapeptide repeat of succinyl-transferase NRL19_03065 PF12464 Maltose acetyltransferase NRL19_03070 PF13194 Domain of unknown function (DUF4010) NRL19_03075 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRL19_03080 PF00005 ABC transporter NRL19_03085 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_03090 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_03095 PF00291 Pyridoxal-phosphate dependent enzyme NRL19_03100 PF00326 Prolyl oligopeptidase family NRL19_03100 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NRL19_03115 PF08335 GlnD PII-uridylyltransferase NRL19_03115 PF03710 Glutamate-ammonia ligase adenylyltransferase NRL19_03125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_03125 PF00672 HAMP domain NRL19_03125 PF02743 Cache domain NRL19_03130 PF00027 Cyclic nucleotide-binding domain NRL19_03130 PF00520 Ion transport protein NRL19_03135 PF08239 Bacterial SH3 domain NRL19_03140 PF00293 NUDIX domain NRL19_03140 PF09297 NADH pyrophosphatase zinc ribbon domain NRL19_03145 PF01208 Uroporphyrinogen decarboxylase (URO-D) NRL19_03150 PF00480 ROK family NRL19_03155 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NRL19_03155 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NRL19_03160 PF00162 Phosphoglycerate kinase NRL19_03165 PF01116 Fructose-bisphosphate aldolase class-II NRL19_03170 PF01266 FAD dependent oxidoreductase NRL19_03180 PF11412 Disulphide bond corrector protein DsbC NRL19_03180 PF02683 Cytochrome C biogenesis protein transmembrane region NRL19_03185 PF03091 CutA1 divalent ion tolerance protein NRL19_03200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_03200 PF03466 LysR substrate binding domain NRL19_03205 PF01571 Aminomethyltransferase folate-binding domain NRL19_03210 PF03937 Flavinator of succinate dehydrogenase NRL19_03220 PF02910 Fumarate reductase flavoprotein C-term NRL19_03220 PF00890 FAD binding domain NRL19_03225 PF04542 Sigma-70 region 2 NRL19_03225 PF08281 Sigma-70, region 4 NRL19_03230 PF03873 Anti sigma-E protein RseA, C-terminal domain NRL19_03230 PF03872 Anti sigma-E protein RseA, N-terminal domain NRL19_03235 PF03888 MucB/RseB N-terminal domain NRL19_03235 PF17188 MucB/RseB C-terminal domain NRL19_03245 PF03144 Elongation factor Tu domain 2 NRL19_03245 PF00679 Elongation factor G C-terminus NRL19_03245 PF00009 Elongation factor Tu GTP binding domain NRL19_03245 PF06421 GTP-binding protein LepA C-terminus NRL19_03250 PF10502 Signal peptidase, peptidase S26 NRL19_03255 PF00035 Double-stranded RNA binding motif NRL19_03255 PF14622 Ribonuclease-III-like NRL19_03260 PF01926 50S ribosome-binding GTPase NRL19_03260 PF07650 KH domain NRL19_03265 PF11967 Recombination protein O N terminal NRL19_03265 PF02565 Recombination protein O C terminal NRL19_03270 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NRL19_03275 PF01510 N-acetylmuramoyl-L-alanine amidase NRL19_03280 PF07308 Protein of unknown function (DUF1456) NRL19_03285 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRL19_03285 PF00072 Response regulator receiver domain NRL19_03285 PF01627 Hpt domain NRL19_03285 PF00512 His Kinase A (phospho-acceptor) domain NRL19_03285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_03285 PF00672 HAMP domain NRL19_03290 PF05958 tRNA (Uracil-5-)-methyltransferase NRL19_03290 PF01938 TRAM domain NRL19_03295 PF02824 TGS domain NRL19_03295 PF13291 ACT domain NRL19_03295 PF04607 Region found in RelA / SpoT proteins NRL19_03300 PF03819 MazG nucleotide pyrophosphohydrolase domain NRL19_03305 PF00117 Glutamine amidotransferase class-I NRL19_03305 PF06418 CTP synthase N-terminus NRL19_03310 PF03952 Enolase, N-terminal domain NRL19_03310 PF00113 Enolase, C-terminal TIM barrel domain NRL19_03315 PF04977 Septum formation initiator NRL19_03320 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NRL19_03325 PF02542 YgbB family NRL19_03330 PF01142 tRNA pseudouridine synthase D (TruD) NRL19_03335 PF01975 Survival protein SurE NRL19_03345 PF09335 SNARE associated Golgi protein NRL19_03350 PF01476 LysM domain NRL19_03350 PF01551 Peptidase family M23 NRL19_03355 PF00140 Sigma-70 factor, region 1.2 NRL19_03355 PF04542 Sigma-70 region 2 NRL19_03355 PF04539 Sigma-70 region 3 NRL19_03355 PF04545 Sigma-70, region 4 NRL19_03360 PF00814 Glycoprotease family NRL19_03365 PF01165 Ribosomal protein S21 NRL19_03370 PF09424 Yqey-like protein NRL19_03375 PF01807 CHC2 zinc finger NRL19_03375 PF10410 DnaB-helicase binding domain of primase NRL19_03375 PF08278 DNA primase DnaG DnaB-binding NRL19_03375 PF08275 DNA primase catalytic core, N-terminal domain NRL19_03380 PF04546 Sigma-70, non-essential region NRL19_03380 PF03979 Sigma-70 factor, region 1.1 NRL19_03380 PF04539 Sigma-70 region 3 NRL19_03380 PF04542 Sigma-70 region 2 NRL19_03380 PF04545 Sigma-70, region 4 NRL19_03380 PF00140 Sigma-70 factor, region 1.2 NRL19_03395 PF00128 Alpha amylase, catalytic domain NRL19_03410 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_03410 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_03410 PF01610 Transposase NRL19_03415 PF02844 Phosphoribosylglycinamide synthetase, N domain NRL19_03415 PF02843 Phosphoribosylglycinamide synthetase, C domain NRL19_03415 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NRL19_03420 PF02142 MGS-like domain NRL19_03420 PF01808 AICARFT/IMPCHase bienzyme NRL19_03425 PF13411 MerR HTH family regulatory protein NRL19_03435 PF03889 Alternative ribosome-rescue factor A NRL19_03440 PF06969 HemN C-terminal domain NRL19_03440 PF04055 Radical SAM superfamily NRL19_03445 PF01725 Ham1 family NRL19_03450 PF07690 Major Facilitator Superfamily NRL19_03455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRL19_03455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NRL19_03465 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_03465 PF01610 Transposase NRL19_03465 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_03470 PF01957 NfeD-like C-terminal, partner-binding NRL19_03475 PF01145 SPFH domain / Band 7 family NRL19_03475 PF16200 C-terminal region of band_7 NRL19_03480 PF14824 Sirohaem biosynthesis protein central NRL19_03480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NRL19_03480 PF10414 Sirohaem synthase dimerisation region NRL19_03485 PF01507 Phosphoadenosine phosphosulfate reductase family NRL19_03490 PF00009 Elongation factor Tu GTP binding domain NRL19_03495 PF02080 TrkA-C domain NRL19_03495 PF03600 Citrate transporter NRL19_03505 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_03505 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_03505 PF01610 Transposase NRL19_03515 PF13676 TIR domain NRL19_03535 PF08447 PAS fold NRL19_03535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_03545 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_03545 PF01610 Transposase NRL19_03545 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_03560 PF00005 ABC transporter NRL19_03575 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) NRL19_03590 PF00719 Inorganic pyrophosphatase NRL19_03595 PF01225 Mur ligase family, catalytic domain NRL19_03595 PF02875 Mur ligase family, glutamate ligase domain NRL19_03595 PF08245 Mur ligase middle domain NRL19_03600 PF02441 Flavoprotein NRL19_03605 PF00440 Bacterial regulatory proteins, tetR family NRL19_03610 PF00156 Phosphoribosyl transferase domain NRL19_03615 PF00005 ABC transporter NRL19_03620 PF01061 ABC-2 type transporter NRL19_03630 PF02569 Pantoate-beta-alanine ligase NRL19_03635 PF02548 Ketopantoate hydroxymethyltransferase NRL19_03640 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NRL19_03645 PF12627 Probable RNA and SrmB- binding site of polymerase A NRL19_03645 PF01743 Poly A polymerase head domain NRL19_03645 PF12626 Polymerase A arginine-rich C-terminus NRL19_03650 PF00749 tRNA synthetases class I (E and Q), catalytic domain NRL19_03655 PF01258 Prokaryotic dksA/traR C4-type zinc finger NRL19_03660 PF03749 Sugar fermentation stimulation protein RE domain NRL19_03660 PF17746 SfsA N-terminal OB domain NRL19_03670 PF08482 ATP-dependent helicase C-terminal NRL19_03670 PF00270 DEAD/DEAH box helicase NRL19_03670 PF04408 Helicase associated domain (HA2) NRL19_03670 PF00271 Helicase conserved C-terminal domain NRL19_03675 PF14814 Bifunctional transglycosylase second domain NRL19_03675 PF00905 Penicillin binding protein transpeptidase domain NRL19_03675 PF00912 Transglycosylase NRL19_03680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRL19_03685 PF00893 Small Multidrug Resistance protein NRL19_03690 PF00893 Small Multidrug Resistance protein NRL19_03695 PF03466 LysR substrate binding domain NRL19_03695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_03705 PF01569 PAP2 superfamily NRL19_03720 PF00202 Aminotransferase class-III NRL19_03725 PF00654 Voltage gated chloride channel NRL19_03735 PF01521 Iron-sulphur cluster biosynthesis NRL19_03770 PF08343 Ribonucleotide reductase N-terminal NRL19_03770 PF02867 Ribonucleotide reductase, barrel domain NRL19_03770 PF00317 Ribonucleotide reductase, all-alpha domain NRL19_03780 PF02562 PhoH-like protein NRL19_03780 PF13638 PIN domain NRL19_03790 PF00005 ABC transporter NRL19_03795 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_03815 PF00694 Aconitase C-terminal domain NRL19_03820 PF00330 Aconitase family (aconitate hydratase) NRL19_03825 PF00180 Isocitrate/isopropylmalate dehydrogenase NRL19_03830 PF00682 HMGL-like NRL19_03830 PF08502 LeuA allosteric (dimerisation) domain NRL19_03840 PF01569 PAP2 superfamily NRL19_03855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NRL19_03855 PF00205 Thiamine pyrophosphate enzyme, central domain NRL19_03855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRL19_03860 PF10369 Small subunit of acetolactate synthase NRL19_03865 PF01610 Transposase NRL19_03865 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_03865 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_03870 PF07085 DRTGG domain NRL19_03870 PF01515 Phosphate acetyl/butaryl transferase NRL19_03875 PF00871 Acetokinase family NRL19_03880 PF04217 Protein of unknown function, DUF412 NRL19_03885 PF03887 YfbU domain NRL19_03890 PF00578 AhpC/TSA family NRL19_03895 PF01842 ACT domain NRL19_03900 PF00701 Dihydrodipicolinate synthetase family NRL19_03905 PF06804 NlpB/DapX lipoprotein NRL19_03910 PF01259 SAICAR synthetase NRL19_03920 PF03466 LysR substrate binding domain NRL19_03920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_03925 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NRL19_03945 PF01627 Hpt domain NRL19_03945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_03945 PF00072 Response regulator receiver domain NRL19_03945 PF00512 His Kinase A (phospho-acceptor) domain NRL19_03945 PF18415 Histidine kinase receptor ArcB trans-membrane domain NRL19_03945 PF00989 PAS fold NRL19_03950 PF01966 HD domain NRL19_03960 PF00072 Response regulator receiver domain NRL19_03960 PF09456 RcsC Alpha-Beta-Loop (ABL) NRL19_03960 PF00512 His Kinase A (phospho-acceptor) domain NRL19_03960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_03965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_03965 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRL19_03965 PF00072 Response regulator receiver domain NRL19_03965 PF01627 Hpt domain NRL19_03965 PF00512 His Kinase A (phospho-acceptor) domain NRL19_03970 PF00990 Diguanylate cyclase, GGDEF domain NRL19_03970 PF03707 Bacterial signalling protein N terminal repeat NRL19_03970 PF00563 EAL domain NRL19_03975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_03980 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_03980 PF01610 Transposase NRL19_03980 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_03985 PF02357 Transcription termination factor nusG NRL19_03990 PF03180 NLPA lipoprotein NRL19_03995 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_04000 PF09383 NIL domain NRL19_04000 PF00005 ABC transporter NRL19_04010 PF00480 ROK family NRL19_04015 PF08331 Domain of unknown function (DUF1730) NRL19_04020 PF03853 YjeF-related protein N-terminus NRL19_04020 PF01256 Carbohydrate kinase NRL19_04025 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NRL19_04030 PF01520 N-acetylmuramoyl-L-alanine amidase NRL19_04035 PF08676 MutL C terminal dimerisation domain NRL19_04035 PF01119 DNA mismatch repair protein, C-terminal domain NRL19_04045 PF17209 Hfq protein NRL19_04050 PF16360 GTP-binding GTPase Middle Region NRL19_04050 PF13167 GTP-binding GTPase N-terminal NRL19_04050 PF01926 50S ribosome-binding GTPase NRL19_04055 PF12221 Bacterial membrane protein N terminal NRL19_04055 PF01145 SPFH domain / Band 7 family NRL19_04060 PF01145 SPFH domain / Band 7 family NRL19_04065 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) NRL19_04070 PF00348 Polyprenyl synthetase NRL19_04075 PF00829 Ribosomal prokaryotic L21 protein NRL19_04080 PF01016 Ribosomal L27 protein NRL19_04085 PF01926 50S ribosome-binding GTPase NRL19_04085 PF01018 GTP1/OBG NRL19_04090 PF07670 Nucleoside recognition NRL19_04100 PF00296 Luciferase-like monooxygenase NRL19_04110 PF00149 Calcineurin-like phosphoesterase NRL19_04115 PF04379 ApaG domain NRL19_04120 PF00398 Ribosomal RNA adenine dimethylase NRL19_04125 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NRL19_04130 PF00639 PPIC-type PPIASE domain NRL19_04130 PF09312 SurA N-terminal domain NRL19_04135 PF04453 LPS transport system D NRL19_04135 PF03968 OstA-like protein NRL19_04140 PF01636 Phosphotransferase enzyme family NRL19_04145 PF00483 Nucleotidyl transferase NRL19_04150 PF00226 DnaJ domain NRL19_04150 PF05099 Tellurite resistance protein TerB NRL19_04155 PF00860 Permease family NRL19_04165 PF12848 ABC transporter NRL19_04165 PF00005 ABC transporter NRL19_04170 PF01464 Transglycosylase SLT domain NRL19_04175 PF00535 Glycosyl transferase family 2 NRL19_04185 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NRL19_04190 PF01370 NAD dependent epimerase/dehydratase family NRL19_04195 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NRL19_04195 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NRL19_04195 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NRL19_04205 PF00005 ABC transporter NRL19_04210 PF01032 FecCD transport family NRL19_04220 PF06228 Haem utilisation ChuX/HutX NRL19_04225 PF01243 Pyridoxamine 5'-phosphate oxidase NRL19_04245 PF00593 TonB dependent receptor NRL19_04245 PF07715 TonB-dependent Receptor Plug Domain NRL19_04250 PF12832 MFS_1 like family NRL19_04255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_04255 PF00512 His Kinase A (phospho-acceptor) domain NRL19_04255 PF00989 PAS fold NRL19_04260 PF00704 Glycosyl hydrolases family 18 NRL19_04260 PF08329 Chitinase A, N-terminal domain NRL19_04265 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_04265 PF01610 Transposase NRL19_04265 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_04270 PF13847 Methyltransferase domain NRL19_04275 PF00027 Cyclic nucleotide-binding domain NRL19_04275 PF13545 Crp-like helix-turn-helix domain NRL19_04280 PF02566 OsmC-like protein NRL19_04295 PF00485 Phosphoribulokinase / Uridine kinase family NRL19_04300 PF06794 Uncharacterised protein family (UPF0270) NRL19_04305 PF00563 EAL domain NRL19_04305 PF01590 GAF domain NRL19_04305 PF00990 Diguanylate cyclase, GGDEF domain NRL19_04305 PF00360 Phytochrome region NRL19_04310 PF00561 alpha/beta hydrolase fold NRL19_04315 PF01584 CheW-like domain NRL19_04315 PF00072 Response regulator receiver domain NRL19_04325 PF09526 Probable metal-binding protein (DUF2387) NRL19_04330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRL19_04335 PF04102 SlyX NRL19_04345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRL19_04345 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NRL19_04350 PF02954 Bacterial regulatory protein, Fis family NRL19_04350 PF00158 Sigma-54 interaction domain NRL19_04350 PF00072 Response regulator receiver domain NRL19_04370 PF02872 5'-nucleotidase, C-terminal domain NRL19_04370 PF00149 Calcineurin-like phosphoesterase NRL19_04380 PF03796 DnaB-like helicase C terminal domain NRL19_04380 PF00772 DnaB-like helicase N terminal domain NRL19_04385 PF01168 Alanine racemase, N-terminal domain NRL19_04385 PF00842 Alanine racemase, C-terminal domain NRL19_04390 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NRL19_04390 PF14850 DNA-binding domain of Proline dehydrogenase NRL19_04390 PF00171 Aldehyde dehydrogenase family NRL19_04390 PF01619 Proline dehydrogenase NRL19_04400 PF00206 Lyase NRL19_04400 PF10415 Fumarase C C-terminus NRL19_04405 PF12801 4Fe-4S binding domain NRL19_04405 PF04205 FMN-binding domain NRL19_04410 PF18793 Nitrous oxide reductase propeller repeat 2 NRL19_04410 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NRL19_04410 PF18764 Nitrous oxide reductase propeller repeat NRL19_04415 PF05048 Periplasmic copper-binding protein (NosD) NRL19_04420 PF00005 ABC transporter NRL19_04425 PF12679 ABC-2 family transporter protein NRL19_04430 PF05573 NosL NRL19_04435 PF02416 mttA/Hcf106 family NRL19_04440 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NRL19_04445 PF03575 Peptidase family S51 NRL19_04450 PF02554 Carbon starvation protein CstA NRL19_04450 PF13722 5TM C-terminal transporter carbon starvation CstA NRL19_04455 PF04397 LytTr DNA-binding domain NRL19_04455 PF00072 Response regulator receiver domain NRL19_04460 PF07694 5TMR of 5TMR-LYT NRL19_04460 PF06580 Histidine kinase NRL19_04470 PF00563 EAL domain NRL19_04470 PF01590 GAF domain NRL19_04470 PF00990 Diguanylate cyclase, GGDEF domain NRL19_04470 PF00989 PAS fold NRL19_04475 PF13808 DDE_Tnp_1-associated NRL19_04475 PF01609 Transposase DDE domain NRL19_04500 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NRL19_04500 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NRL19_04505 PF03466 LysR substrate binding domain NRL19_04505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_04510 PF01810 LysE type translocator NRL19_04515 PF01136 Peptidase family U32 NRL19_04515 PF12392 Collagenase NRL19_04525 PF06906 Protein of unknown function (DUF1272) NRL19_04535 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NRL19_04535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NRL19_04540 PF12833 Helix-turn-helix domain NRL19_04540 PF00730 HhH-GPD superfamily base excision DNA repair protein NRL19_04540 PF02805 Metal binding domain of Ada NRL19_04540 PF06029 AlkA N-terminal domain NRL19_04545 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NRL19_04570 PF00106 short chain dehydrogenase NRL19_04575 PF03573 outer membrane porin, OprD family NRL19_04580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_04590 PF02447 GntP family permease NRL19_04595 PF01370 NAD dependent epimerase/dehydratase family NRL19_04600 PF01261 Xylose isomerase-like TIM barrel NRL19_04605 PF00596 Class II Aldolase and Adducin N-terminal domain NRL19_04610 PF07005 Sugar-binding N-terminal domain NRL19_04610 PF17042 Nucleotide-binding C-terminal domain NRL19_04615 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NRL19_04615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NRL19_04620 PF00455 DeoR C terminal sensor domain NRL19_04620 PF08220 DeoR-like helix-turn-helix domain NRL19_04630 PF07995 Glucose / Sorbosone dehydrogenase NRL19_04635 PF03976 Polyphosphate kinase 2 (PPK2) NRL19_04660 PF01817 Chorismate mutase type II NRL19_04660 PF00800 Prephenate dehydratase NRL19_04685 PF08349 Protein of unknown function (DUF1722) NRL19_04690 PF13411 MerR HTH family regulatory protein NRL19_04695 PF00875 DNA photolyase NRL19_04695 PF03441 FAD binding domain of DNA photolyase NRL19_04705 PF00106 short chain dehydrogenase NRL19_04745 PF00210 Ferritin-like domain NRL19_04750 PF03063 Prismane/CO dehydrogenase family NRL19_04755 PF00042 Globin NRL19_04755 PF00970 Oxidoreductase FAD-binding domain NRL19_04755 PF00175 Oxidoreductase NAD-binding domain NRL19_04760 PF16363 GDP-mannose 4,6 dehydratase NRL19_04775 PF00873 AcrB/AcrD/AcrF family NRL19_04780 PF00529 HlyD membrane-fusion protein of T1SS NRL19_04780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRL19_04785 PF00072 Response regulator receiver domain NRL19_04785 PF00486 Transcriptional regulatory protein, C terminal NRL19_04790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_04790 PF00672 HAMP domain NRL19_04790 PF00512 His Kinase A (phospho-acceptor) domain NRL19_04795 PF01740 STAS domain NRL19_04795 PF00916 Sulfate permease family NRL19_04800 PF01965 DJ-1/PfpI family NRL19_04805 PF08546 Ketopantoate reductase PanE/ApbA C terminal NRL19_04805 PF02558 Ketopantoate reductase PanE/ApbA NRL19_04810 PF04461 Protein of unknown function (DUF520) NRL19_04815 PF03502 Nucleoside-specific channel-forming protein, Tsx NRL19_04820 PF07690 Major Facilitator Superfamily NRL19_04830 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NRL19_04840 PF05175 Methyltransferase small domain NRL19_04845 PF01722 BolA-like protein NRL19_04850 PF11973 NQRA C-terminal domain NRL19_04850 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NRL19_04855 PF03116 NQR2, RnfD, RnfE family NRL19_04860 PF04205 FMN-binding domain NRL19_04865 PF02508 Rnf-Nqr subunit, membrane protein NRL19_04870 PF02508 Rnf-Nqr subunit, membrane protein NRL19_04875 PF00111 2Fe-2S iron-sulfur cluster binding domain NRL19_04875 PF00175 Oxidoreductase NAD-binding domain NRL19_04875 PF00970 Oxidoreductase FAD-binding domain NRL19_04880 PF02424 ApbE family NRL19_04895 PF11799 impB/mucB/samB family C-terminal domain NRL19_04895 PF00817 impB/mucB/samB family NRL19_04895 PF11798 IMS family HHH motif NRL19_04900 PF00672 HAMP domain NRL19_04900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_04905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_04905 PF03466 LysR substrate binding domain NRL19_04920 PF18125 RlmM ferredoxin-like domain NRL19_04920 PF01728 FtsJ-like methyltransferase NRL19_04930 PF18324 Hypothetical protein TT1725 NRL19_04930 PF00180 Isocitrate/isopropylmalate dehydrogenase NRL19_04935 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NRL19_04935 PF01367 5'-3' exonuclease, C-terminal SAM fold NRL19_04940 PF03641 Possible lysine decarboxylase NRL19_04940 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NRL19_04940 PF11892 Domain of unknown function (DUF3412) NRL19_04945 PF00990 Diguanylate cyclase, GGDEF domain NRL19_04955 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NRL19_04955 PF14489 QueF-like protein NRL19_04960 PF07348 Syd protein (SUKH-2) NRL19_04965 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) NRL19_04990 PF04287 tRNA pseudouridine synthase C NRL19_04995 PF00849 RNA pseudouridylate synthase NRL19_05000 PF00258 Flavodoxin NRL19_05010 PF02264 LamB porin NRL19_05015 PF07148 Maltose operon periplasmic protein precursor (MalM) NRL19_05020 PF00367 phosphotransferase system, EIIB NRL19_05020 PF02378 Phosphotransferase system, EIIC NRL19_05025 PF11944 Protein of unknown function (DUF3461) NRL19_05030 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NRL19_05030 PF14602 Hexapeptide repeat of succinyl-transferase NRL19_05030 PF00132 Bacterial transferase hexapeptide (six repeats) NRL19_05035 PF01909 Nucleotidyltransferase domain NRL19_05035 PF01966 HD domain NRL19_05035 PF08335 GlnD PII-uridylyltransferase NRL19_05035 PF01842 ACT domain NRL19_05040 PF00557 Metallopeptidase family M24 NRL19_05045 PF00318 Ribosomal protein S2 NRL19_05050 PF00889 Elongation factor TS NRL19_05055 PF00696 Amino acid kinase family NRL19_05060 PF01765 Ribosome recycling factor NRL19_05065 PF01255 Putative undecaprenyl diphosphate synthase NRL19_05075 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NRL19_05075 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NRL19_05075 PF13288 DXP reductoisomerase C-terminal domain NRL19_05080 PF17820 PDZ domain NRL19_05080 PF02163 Peptidase family M50 NRL19_05085 PF01103 Surface antigen NRL19_05085 PF07244 Surface antigen variable number repeat NRL19_05090 PF03938 Outer membrane protein (OmpH-like) NRL19_05095 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NRL19_05095 PF00132 Bacterial transferase hexapeptide (six repeats) NRL19_05100 PF07977 FabA-like domain NRL19_05105 PF00132 Bacterial transferase hexapeptide (six repeats) NRL19_05105 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NRL19_05110 PF02684 Lipid-A-disaccharide synthetase NRL19_05115 PF01351 Ribonuclease HII NRL19_05120 PF01336 OB-fold nucleic acid binding domain NRL19_05120 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NRL19_05120 PF07733 Bacterial DNA polymerase III alpha NTPase domain NRL19_05120 PF02811 PHP domain NRL19_05120 PF14579 Helix-hairpin-helix motif NRL19_05125 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NRL19_05135 PF03466 LysR substrate binding domain NRL19_05135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_05145 PF13520 Amino acid permease NRL19_05165 PF05649 Peptidase family M13 NRL19_05165 PF01431 Peptidase family M13 NRL19_05170 PF11734 TilS substrate C-terminal domain NRL19_05170 PF09179 TilS substrate binding domain NRL19_05170 PF01171 PP-loop family NRL19_05175 PF00990 Diguanylate cyclase, GGDEF domain NRL19_05180 PF00999 Sodium/hydrogen exchanger family NRL19_05180 PF02254 TrkA-N domain NRL19_05180 PF02080 TrkA-C domain NRL19_05200 PF00196 Bacterial regulatory proteins, luxR family NRL19_05200 PF00072 Response regulator receiver domain NRL19_05210 PF00128 Alpha amylase, catalytic domain NRL19_05225 PF00535 Glycosyl transferase family 2 NRL19_05240 PF01471 Putative peptidoglycan binding domain NRL19_05240 PF03734 L,D-transpeptidase catalytic domain NRL19_05245 PF05951 Bacterial protein of unknown function (DUF882) NRL19_05255 PF03458 UPF0126 domain NRL19_05265 PF06470 SMC proteins Flexible Hinge Domain NRL19_05265 PF02463 RecF/RecN/SMC N terminal domain NRL19_05270 PF04354 ZipA, C-terminal FtsZ-binding domain NRL19_05275 PF01653 NAD-dependent DNA ligase adenylation domain NRL19_05275 PF03120 NAD-dependent DNA ligase OB-fold domain NRL19_05275 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NRL19_05275 PF12826 Helix-hairpin-helix motif NRL19_05275 PF00533 BRCA1 C Terminus (BRCT) domain NRL19_05285 PF03477 ATP cone domain NRL19_05285 PF13597 Anaerobic ribonucleoside-triphosphate reductase NRL19_05295 PF01679 Proteolipid membrane potential modulator NRL19_05315 PF00529 HlyD membrane-fusion protein of T1SS NRL19_05315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRL19_05320 PF01047 MarR family NRL19_05325 PF00989 PAS fold NRL19_05325 PF17203 Single cache domain 3 NRL19_05325 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NRL19_05325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_05330 PF12431 Transcriptional regulator NRL19_05330 PF00072 Response regulator receiver domain NRL19_05340 PF00248 Aldo/keto reductase family NRL19_05350 PF00892 EamA-like transporter family NRL19_05360 PF00171 Aldehyde dehydrogenase family NRL19_05365 PF01590 GAF domain NRL19_05365 PF00158 Sigma-54 interaction domain NRL19_05365 PF02954 Bacterial regulatory protein, Fis family NRL19_05370 PF17158 Membrane-associated sensor, integral membrane domain NRL19_05370 PF00990 Diguanylate cyclase, GGDEF domain NRL19_05375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRL19_05380 PF00072 Response regulator receiver domain NRL19_05380 PF00486 Transcriptional regulatory protein, C terminal NRL19_05385 PF11808 Phosphate regulon sensor protein PhoR NRL19_05385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_05385 PF00989 PAS fold NRL19_05385 PF00512 His Kinase A (phospho-acceptor) domain NRL19_05390 PF12849 PBP superfamily domain NRL19_05395 PF01435 Peptidase family M48 NRL19_05405 PF00480 ROK family NRL19_05410 PF03932 CutC family NRL19_05430 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NRL19_05430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRL19_05435 PF00005 ABC transporter NRL19_05450 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRL19_05455 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_05460 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_05465 PF00005 ABC transporter NRL19_05475 PF00293 NUDIX domain NRL19_05480 PF08534 Redoxin NRL19_05485 PF01699 Sodium/calcium exchanger protein NRL19_05490 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NRL19_05490 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NRL19_05495 PF01235 Sodium:alanine symporter family NRL19_05505 PF00860 Permease family NRL19_05510 PF00990 Diguanylate cyclase, GGDEF domain NRL19_05510 PF00072 Response regulator receiver domain NRL19_05515 PF10692 Protein of unknown function (DUF2498) NRL19_05520 PF01554 MatE NRL19_05525 PF12833 Helix-turn-helix domain NRL19_05530 PF00390 Malic enzyme, N-terminal domain NRL19_05530 PF03949 Malic enzyme, NAD binding domain NRL19_05535 PF00691 OmpA family NRL19_05535 PF01389 OmpA-like transmembrane domain NRL19_05540 PF01389 OmpA-like transmembrane domain NRL19_05540 PF00691 OmpA family NRL19_05545 PF01389 OmpA-like transmembrane domain NRL19_05545 PF00691 OmpA family NRL19_05560 PF13006 Insertion element 4 transposase N-terminal NRL19_05560 PF01609 Transposase DDE domain NRL19_05565 PF00209 Sodium:neurotransmitter symporter family NRL19_05570 PF01734 Patatin-like phospholipase NRL19_05575 PF00990 Diguanylate cyclase, GGDEF domain NRL19_05575 PF17158 Membrane-associated sensor, integral membrane domain NRL19_05585 PF00873 AcrB/AcrD/AcrF family NRL19_05590 PF08497 Radical SAM N-terminal NRL19_05590 PF04055 Radical SAM superfamily NRL19_05590 PF11842 Domain of unknown function (DUF3362) NRL19_05610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRL19_05615 PF02075 Crossover junction endodeoxyribonuclease RuvC NRL19_05630 PF01464 Transglycosylase SLT domain NRL19_05630 PF10145 Phage-related minor tail protein NRL19_05630 PF01551 Peptidase family M23 NRL19_05645 PF13396 Phospholipase_D-nuclease N-terminal NRL19_05645 PF13091 PLD-like domain NRL19_05655 PF01842 ACT domain NRL19_05655 PF00551 Formyl transferase NRL19_05660 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NRL19_05670 PF00085 Thioredoxin NRL19_05675 PF01648 4'-phosphopantetheinyl transferase superfamily NRL19_05685 PF00877 NlpC/P60 family NRL19_05690 PF01610 Transposase NRL19_05690 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_05690 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_05695 PF05971 RNA methyltransferase NRL19_05700 PF01575 MaoC like domain NRL19_05710 PF17969 L,D-transpeptidase C-terminal domain NRL19_05710 PF03734 L,D-transpeptidase catalytic domain NRL19_05710 PF01476 LysM domain NRL19_05740 PF10725 Protein of unknown function (DUF2517) NRL19_05745 PF00072 Response regulator receiver domain NRL19_05745 PF00989 PAS fold NRL19_05745 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRL19_05745 PF01627 Hpt domain NRL19_05745 PF00512 His Kinase A (phospho-acceptor) domain NRL19_05745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_05750 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NRL19_05755 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NRL19_05755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRL19_05760 PF02690 Na+/Pi-cotransporter NRL19_05770 PF13520 Amino acid permease NRL19_05775 PF00324 Amino acid permease NRL19_05785 PF00202 Aminotransferase class-III NRL19_05790 PF00171 Aldehyde dehydrogenase family NRL19_05795 PF01381 Helix-turn-helix NRL19_05795 PF07883 Cupin domain NRL19_05800 PF01266 FAD dependent oxidoreductase NRL19_05830 PF00072 Response regulator receiver domain NRL19_05830 PF00158 Sigma-54 interaction domain NRL19_05830 PF02954 Bacterial regulatory protein, Fis family NRL19_05835 PF02254 TrkA-N domain NRL19_05835 PF00999 Sodium/hydrogen exchanger family NRL19_05850 PF04381 Putative exonuclease, RdgC NRL19_05855 PF00583 Acetyltransferase (GNAT) family NRL19_05860 PF00149 Calcineurin-like phosphoesterase NRL19_05860 PF12320 Type 5 capsule protein repressor C-terminal domain NRL19_05870 PF01292 Prokaryotic cytochrome b561 NRL19_05875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRL19_05880 PF00391 PEP-utilising enzyme, mobile domain NRL19_05880 PF02896 PEP-utilising enzyme, TIM barrel domain NRL19_05880 PF05524 PEP-utilising enzyme, N-terminal NRL19_05885 PF00381 PTS HPr component phosphorylation site NRL19_05890 PF00291 Pyridoxal-phosphate dependent enzyme NRL19_05895 PF00004 ATPase family associated with various cellular activities (AAA) NRL19_05895 PF17862 AAA+ lid domain NRL19_05895 PF06480 FtsH Extracellular NRL19_05895 PF01434 Peptidase family M41 NRL19_05905 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NRL19_05905 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NRL19_05910 PF01980 tRNA-methyltransferase O NRL19_05910 PF18389 TrmO C-terminal domain NRL19_05930 PF00664 ABC transporter transmembrane region NRL19_05930 PF00005 ABC transporter NRL19_05935 PF00664 ABC transporter transmembrane region NRL19_05935 PF00005 ABC transporter NRL19_05950 PF00072 Response regulator receiver domain NRL19_05950 PF00486 Transcriptional regulatory protein, C terminal NRL19_05960 PF03737 Aldolase/RraA NRL19_05975 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NRL19_05980 PF00588 SpoU rRNA Methylase family NRL19_05985 PF00696 Amino acid kinase family NRL19_05985 PF01842 ACT domain NRL19_05985 PF13840 ACT domain NRL19_05985 PF00742 Homoserine dehydrogenase NRL19_05985 PF03447 Homoserine dehydrogenase, NAD binding domain NRL19_05990 PF00288 GHMP kinases N terminal domain NRL19_05990 PF08544 GHMP kinases C terminal NRL19_05995 PF14821 Threonine synthase N terminus NRL19_05995 PF00291 Pyridoxal-phosphate dependent enzyme NRL19_06040 PF01609 Transposase DDE domain NRL19_06055 PF02028 BCCT, betaine/carnitine/choline family transporter NRL19_06065 PF05114 Protein of unknown function (DUF692) NRL19_06090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_06090 PF08447 PAS fold NRL19_06090 PF13426 PAS domain NRL19_06105 PF04632 Fusaric acid resistance protein family NRL19_06110 PF03205 Molybdopterin guanine dinucleotide synthesis protein B NRL19_06115 PF12804 MobA-like NTP transferase domain NRL19_06120 PF00390 Malic enzyme, N-terminal domain NRL19_06120 PF03949 Malic enzyme, NAD binding domain NRL19_06130 PF00860 Permease family NRL19_06140 PF10282 Lactonase, 7-bladed beta-propeller NRL19_06150 PF01810 LysE type translocator NRL19_06155 PF02796 Helix-turn-helix domain of resolvase NRL19_06155 PF00239 Resolvase, N terminal domain NRL19_06160 PF01609 Transposase DDE domain NRL19_06160 PF13006 Insertion element 4 transposase N-terminal NRL19_06190 PF18818 Metallopeptidase superfamily domain NRL19_06190 PF08401 Domain of unknown function (DUF1738) NRL19_06190 PF13362 Toprim domain NRL19_06215 PF13356 Arm DNA-binding domain NRL19_06215 PF00589 Phage integrase family NRL19_06220 PF00924 Mechanosensitive ion channel NRL19_06220 PF12795 Mechanosensitive ion channel porin domain NRL19_06220 PF12794 Mechanosensitive ion channel inner membrane domain 1 NRL19_06225 PF00224 Pyruvate kinase, barrel domain NRL19_06225 PF02887 Pyruvate kinase, alpha/beta domain NRL19_06230 PF08007 Cupin superfamily protein NRL19_06235 PF00206 Lyase NRL19_06235 PF08328 Adenylosuccinate lyase C-terminal NRL19_06240 PF04356 Protein of unknown function (DUF489) NRL19_06250 PF00293 NUDIX domain NRL19_06255 PF00849 RNA pseudouridylate synthase NRL19_06260 PF00583 Acetyltransferase (GNAT) family NRL19_06295 PF00180 Isocitrate/isopropylmalate dehydrogenase NRL19_06305 PF00291 Pyridoxal-phosphate dependent enzyme NRL19_06310 PF03466 LysR substrate binding domain NRL19_06310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_06315 PF00816 H-NS histone family NRL19_06320 PF00793 DAHP synthetase I family NRL19_06325 PF04954 Siderophore-interacting protein NRL19_06325 PF08021 Siderophore-interacting FAD-binding domain NRL19_06330 PF02321 Outer membrane efflux protein NRL19_06335 PF02687 FtsX-like permease family NRL19_06335 PF00005 ABC transporter NRL19_06335 PF12704 MacB-like periplasmic core domain NRL19_06340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRL19_06350 PF02463 RecF/RecN/SMC N terminal domain NRL19_06355 PF17158 Membrane-associated sensor, integral membrane domain NRL19_06355 PF00990 Diguanylate cyclase, GGDEF domain NRL19_06360 PF01513 ATP-NAD kinase NRL19_06365 PF01025 GrpE NRL19_06370 PF00012 Hsp70 protein NRL19_06375 PF01556 DnaJ C terminal domain NRL19_06375 PF00684 DnaJ central domain NRL19_06375 PF00226 DnaJ domain NRL19_06380 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_06380 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_06380 PF01610 Transposase NRL19_06385 PF02264 LamB porin NRL19_06385 PF11471 Maltoporin periplasmic N-terminal extension NRL19_06390 PF00294 pfkB family carbohydrate kinase NRL19_06395 PF00367 phosphotransferase system, EIIB NRL19_06395 PF02378 Phosphotransferase system, EIIC NRL19_06400 PF00251 Glycosyl hydrolases family 32 N-terminal domain NRL19_06400 PF08244 Glycosyl hydrolases family 32 C terminal NRL19_06405 PF13407 Periplasmic binding protein domain NRL19_06405 PF00356 Bacterial regulatory proteins, lacI family NRL19_06410 PF02308 MgtC family NRL19_06420 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRL19_06430 PF01022 Bacterial regulatory protein, arsR family NRL19_06435 PF04143 Sulphur transport NRL19_06450 PF00873 AcrB/AcrD/AcrF family NRL19_06455 PF00563 EAL domain NRL19_06455 PF00990 Diguanylate cyclase, GGDEF domain NRL19_06455 PF03707 Bacterial signalling protein N terminal repeat NRL19_06460 PF03099 Biotin/lipoate A/B protein ligase family NRL19_06460 PF10437 Bacterial lipoate protein ligase C-terminus NRL19_06475 PF00873 AcrB/AcrD/AcrF family NRL19_06480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRL19_06480 PF00529 HlyD membrane-fusion protein of T1SS NRL19_06490 PF03372 Endonuclease/Exonuclease/phosphatase family NRL19_06500 PF00072 Response regulator receiver domain NRL19_06505 PF00011 Hsp20/alpha crystallin family NRL19_06510 PF02424 ApbE family NRL19_06515 PF00127 Copper binding proteins, plastocyanin/azurin family NRL19_06530 PF01047 MarR family NRL19_06540 PF01156 Inosine-uridine preferring nucleoside hydrolase NRL19_06550 PF03466 LysR substrate binding domain NRL19_06550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_06555 PF02627 Carboxymuconolactone decarboxylase family NRL19_06560 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NRL19_06560 PF06481 COX Aromatic Rich Motif NRL19_06565 PF00115 Cytochrome C and Quinol oxidase polypeptide I NRL19_06570 PF00510 Cytochrome c oxidase subunit III NRL19_06575 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NRL19_06580 PF01040 UbiA prenyltransferase family NRL19_06585 PF07690 Major Facilitator Superfamily NRL19_06590 PF07237 Protein of unknown function (DUF1428) NRL19_06595 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NRL19_06600 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_06605 PF00005 ABC transporter NRL19_06610 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NRL19_06620 PF03466 LysR substrate binding domain NRL19_06620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_06685 PF01609 Transposase DDE domain NRL19_06685 PF13006 Insertion element 4 transposase N-terminal NRL19_06690 PF00290 Tryptophan synthase alpha chain NRL19_06695 PF00291 Pyridoxal-phosphate dependent enzyme NRL19_06700 PF00218 Indole-3-glycerol phosphate synthase NRL19_06700 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NRL19_06705 PF02885 Glycosyl transferase family, helical bundle domain NRL19_06705 PF00591 Glycosyl transferase family, a/b domain NRL19_06710 PF00117 Glutamine amidotransferase class-I NRL19_06710 PF02885 Glycosyl transferase family, helical bundle domain NRL19_06710 PF00591 Glycosyl transferase family, a/b domain NRL19_06720 PF00425 chorismate binding enzyme NRL19_06720 PF04715 Anthranilate synthase component I, N terminal region NRL19_06725 PF02811 PHP domain NRL19_06730 PF01300 Telomere recombination NRL19_06735 PF02616 Segregation and condensation protein ScpA NRL19_06740 PF04079 Segregation and condensation complex subunit ScpB NRL19_06745 PF01479 S4 domain NRL19_06745 PF00849 RNA pseudouridylate synthase NRL19_06770 PF08361 MAATS-type transcriptional repressor, C-terminal region NRL19_06770 PF00440 Bacterial regulatory proteins, tetR family NRL19_06775 PF00529 HlyD membrane-fusion protein of T1SS NRL19_06775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRL19_06780 PF00873 AcrB/AcrD/AcrF family NRL19_06785 PF02321 Outer membrane efflux protein NRL19_06850 PF01609 Transposase DDE domain NRL19_06865 PF14659 Phage integrase, N-terminal SAM-like domain NRL19_06865 PF00589 Phage integrase family NRL19_06880 PF00440 Bacterial regulatory proteins, tetR family NRL19_06885 PF09317 Domain of unknown function (DUF1974) NRL19_06885 PF02770 Acyl-CoA dehydrogenase, middle domain NRL19_06885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRL19_06885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRL19_06890 PF00873 AcrB/AcrD/AcrF family NRL19_06900 PF00224 Pyruvate kinase, barrel domain NRL19_06900 PF02887 Pyruvate kinase, alpha/beta domain NRL19_06905 PF01418 Helix-turn-helix domain, rpiR family NRL19_06905 PF01380 SIS domain NRL19_06910 PF02685 Glucokinase NRL19_06920 PF01238 Phosphomannose isomerase type I NRL19_06925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_06930 PF00486 Transcriptional regulatory protein, C terminal NRL19_06930 PF00072 Response regulator receiver domain NRL19_06935 PF16363 GDP-mannose 4,6 dehydratase NRL19_06940 PF01609 Transposase DDE domain NRL19_06945 PF01943 Polysaccharide biosynthesis protein NRL19_06950 PF01501 Glycosyl transferase family 8 NRL19_06950 PF00535 Glycosyl transferase family 2 NRL19_06970 PF16363 GDP-mannose 4,6 dehydratase NRL19_06975 PF01370 NAD dependent epimerase/dehydratase family NRL19_06980 PF00293 NUDIX domain NRL19_06985 PF00483 Nucleotidyl transferase NRL19_06985 PF01050 Mannose-6-phosphate isomerase NRL19_06990 PF00535 Glycosyl transferase family 2 NRL19_06995 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NRL19_06995 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NRL19_06995 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NRL19_06995 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NRL19_07000 PF02397 Bacterial sugar transferase NRL19_07005 PF04321 RmlD substrate binding domain NRL19_07010 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NRL19_07015 PF02706 Chain length determinant protein NRL19_07035 PF04337 Protein of unknown function, DUF480 NRL19_07040 PF00271 Helicase conserved C-terminal domain NRL19_07040 PF00176 SNF2 family N-terminal domain NRL19_07040 PF04434 SWIM zinc finger NRL19_07045 PF05472 DNA replication terminus site-binding protein (Ter protein) NRL19_07055 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NRL19_07060 PF00676 Dehydrogenase E1 component NRL19_07065 PF02779 Transketolase, pyrimidine binding domain NRL19_07065 PF02780 Transketolase, C-terminal domain NRL19_07070 PF00364 Biotin-requiring enzyme NRL19_07070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NRL19_07070 PF02817 e3 binding domain NRL19_07075 PF00313 'Cold-shock' DNA-binding domain NRL19_07095 PF01609 Transposase DDE domain NRL19_07120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRL19_07125 PF00892 EamA-like transporter family NRL19_07135 PF01966 HD domain NRL19_07140 PF00849 RNA pseudouridylate synthase NRL19_07140 PF01479 S4 domain NRL19_07150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRL19_07155 PF12850 Calcineurin-like phosphoesterase superfamily domain NRL19_07170 PF13144 Chaperone for flagella basal body P-ring formation NRL19_07175 PF00072 Response regulator receiver domain NRL19_07175 PF01584 CheW-like domain NRL19_07180 PF01739 CheR methyltransferase, SAM binding domain NRL19_07180 PF03705 CheR methyltransferase, all-alpha domain NRL19_07185 PF00460 Flagella basal body rod protein NRL19_07190 PF00460 Flagella basal body rod protein NRL19_07190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRL19_07200 PF07559 Flagellar basal body protein FlaE NRL19_07200 PF00460 Flagella basal body rod protein NRL19_07200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRL19_07205 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_07205 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_07205 PF01610 Transposase NRL19_07210 PF00460 Flagella basal body rod protein NRL19_07210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRL19_07215 PF00460 Flagella basal body rod protein NRL19_07215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRL19_07220 PF02107 Flagellar L-ring protein NRL19_07225 PF02119 Flagellar P-ring protein NRL19_07230 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NRL19_07230 PF10135 Rod binding protein NRL19_07235 PF07196 Flagellin hook IN motif NRL19_07235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRL19_07245 PF01769 Divalent cation transporter NRL19_07245 PF03448 MgtE intracellular N domain NRL19_07245 PF00571 CBS domain NRL19_07250 PF02541 Ppx/GppA phosphatase family NRL19_07255 PF17941 Polyphosphate kinase C-terminal domain 1 NRL19_07255 PF13089 Polyphosphate kinase N-terminal domain NRL19_07255 PF02503 Polyphosphate kinase middle domain NRL19_07255 PF13090 Polyphosphate kinase C-terminal domain 2 NRL19_07260 PF01842 ACT domain NRL19_07275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_07275 PF00512 His Kinase A (phospho-acceptor) domain NRL19_07275 PF13188 PAS domain NRL19_07280 PF00158 Sigma-54 interaction domain NRL19_07280 PF00072 Response regulator receiver domain NRL19_07280 PF02954 Bacterial regulatory protein, Fis family NRL19_07285 PF01784 NIF3 (NGG1p interacting factor 3) NRL19_07290 PF00551 Formyl transferase NRL19_07295 PF00586 AIR synthase related protein, N-terminal domain NRL19_07295 PF02769 AIR synthase related protein, C-terminal domain NRL19_07310 PF00308 Bacterial dnaA protein NRL19_07315 PF00463 Isocitrate lyase family NRL19_07320 PF01274 Malate synthase NRL19_07335 PF14437 MafB19-like deaminase NRL19_07340 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_07345 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_07350 PF00005 ABC transporter NRL19_07355 PF01895 PhoU domain NRL19_07360 PF00571 CBS domain NRL19_07360 PF03471 Transporter associated domain NRL19_07360 PF01595 Cyclin M transmembrane N-terminal domain NRL19_07370 PF02310 B12 binding domain NRL19_07370 PF02574 Homocysteine S-methyltransferase NRL19_07370 PF00809 Pterin binding enzyme NRL19_07370 PF02965 Vitamin B12 dependent methionine synthase, activation domain NRL19_07370 PF02607 B12 binding domain NRL19_07375 PF13520 Amino acid permease NRL19_07380 PF04116 Fatty acid hydroxylase superfamily NRL19_07385 PF00005 ABC transporter NRL19_07395 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_07400 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRL19_07405 PF08448 PAS fold NRL19_07405 PF00990 Diguanylate cyclase, GGDEF domain NRL19_07410 PF01272 Transcription elongation factor, GreA/GreB, C-term NRL19_07410 PF14760 Rnk N-terminus NRL19_07425 PF00245 Alkaline phosphatase NRL19_07430 PF00245 Alkaline phosphatase NRL19_07435 PF01926 50S ribosome-binding GTPase NRL19_07440 PF07690 Major Facilitator Superfamily NRL19_07445 PF00850 Histone deacetylase domain NRL19_07455 PF13307 Helicase C-terminal domain NRL19_07455 PF06733 DEAD_2 NRL19_07460 PF13609 Gram-negative porin NRL19_07470 PF00155 Aminotransferase class I and II NRL19_07475 PF05872 Bacterial protein of unknown function (DUF853) NRL19_07490 PF03772 Competence protein NRL19_07490 PF00753 Metallo-beta-lactamase superfamily NRL19_07495 PF00664 ABC transporter transmembrane region NRL19_07495 PF00005 ABC transporter NRL19_07500 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NRL19_07505 PF03966 Trm112p-like protein NRL19_07510 PF02348 Cytidylyltransferase NRL19_07515 PF00072 Response regulator receiver domain NRL19_07515 PF00196 Bacterial regulatory proteins, luxR family NRL19_07520 PF08459 UvrC Helix-hairpin-helix N-terminal NRL19_07520 PF02151 UvrB/uvrC motif NRL19_07520 PF01541 GIY-YIG catalytic domain NRL19_07525 PF01066 CDP-alcohol phosphatidyltransferase NRL19_07545 PF03466 LysR substrate binding domain NRL19_07545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_07550 PF01979 Amidohydrolase family NRL19_07560 PF08240 Alcohol dehydrogenase GroES-like domain NRL19_07560 PF00107 Zinc-binding dehydrogenase NRL19_07565 PF16925 Tetracyclin repressor-like, C-terminal domain NRL19_07565 PF00440 Bacterial regulatory proteins, tetR family NRL19_07570 PF04226 Transglycosylase associated protein NRL19_07575 PF00149 Calcineurin-like phosphoesterase NRL19_07585 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NRL19_07590 PF01406 tRNA synthetases class I (C) catalytic domain NRL19_07590 PF09190 DALR domain NRL19_07610 PF01609 Transposase DDE domain NRL19_07610 PF13808 DDE_Tnp_1-associated NRL19_07615 PF01609 Transposase DDE domain NRL19_07625 PF01609 Transposase DDE domain NRL19_07645 PF01609 Transposase DDE domain NRL19_07645 PF13808 DDE_Tnp_1-associated NRL19_07655 PF02463 RecF/RecN/SMC N terminal domain NRL19_07660 PF00990 Diguanylate cyclase, GGDEF domain NRL19_07660 PF13185 GAF domain NRL19_07695 PF01169 Uncharacterized protein family UPF0016 NRL19_07700 PF01253 Translation initiation factor SUI1 NRL19_07710 PF07664 Ferrous iron transport protein B C terminus NRL19_07710 PF02421 Ferrous iron transport protein B NRL19_07710 PF07670 Nucleoside recognition NRL19_07710 PF17910 FeoB cytosolic helical domain NRL19_07720 PF00437 Type II/IV secretion system protein NRL19_07735 PF01032 FecCD transport family NRL19_07740 PF00005 ABC transporter NRL19_07745 PF00793 DAHP synthetase I family NRL19_07750 PF01219 Prokaryotic diacylglycerol kinase NRL19_07755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRL19_07755 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRL19_07755 PF01842 ACT domain NRL19_07760 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NRL19_07765 PF01812 5-formyltetrahydrofolate cyclo-ligase family NRL19_07775 PF05173 Dihydrodipicolinate reductase, C-terminus NRL19_07775 PF01113 Dihydrodipicolinate reductase, N-terminus NRL19_07780 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NRL19_07780 PF00117 Glutamine amidotransferase class-I NRL19_07785 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NRL19_07785 PF02142 MGS-like domain NRL19_07785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NRL19_07790 PF00682 HMGL-like NRL19_07790 PF08502 LeuA allosteric (dimerisation) domain NRL19_07795 PF00990 Diguanylate cyclase, GGDEF domain NRL19_07800 PF07759 Protein of unknown function (DUF1615) NRL19_07830 PF00271 Helicase conserved C-terminal domain NRL19_07830 PF00270 DEAD/DEAH box helicase NRL19_07840 PF14521 Lysine-specific metallo-endopeptidase NRL19_07865 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRL19_07870 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_07875 PF00005 ABC transporter NRL19_07880 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRL19_07880 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NRL19_07885 PF00310 Glutamine amidotransferases class-II NRL19_07885 PF04898 Glutamate synthase central domain NRL19_07885 PF01645 Conserved region in glutamate synthase NRL19_07885 PF01493 GXGXG motif NRL19_07890 PF04055 Radical SAM superfamily NRL19_07890 PF16199 Radical_SAM C-terminal domain NRL19_07895 PF03412 Peptidase C39 family NRL19_07895 PF00664 ABC transporter transmembrane region NRL19_07895 PF00005 ABC transporter NRL19_07925 PF00665 Integrase core domain NRL19_07930 PF01695 IstB-like ATP binding protein NRL19_07950 PF00324 Amino acid permease NRL19_07960 PF03618 Kinase/pyrophosphorylase NRL19_07965 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NRL19_07965 PF00391 PEP-utilising enzyme, mobile domain NRL19_07965 PF02896 PEP-utilising enzyme, TIM barrel domain NRL19_07970 PF00005 ABC transporter NRL19_07995 PF03180 NLPA lipoprotein NRL19_08005 PF11890 Domain of unknown function (DUF3410) NRL19_08005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRL19_08005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRL19_08010 PF01118 Semialdehyde dehydrogenase, NAD binding domain NRL19_08010 PF02774 Semialdehyde dehydrogenase, dimerisation domain NRL19_08020 PF01416 tRNA pseudouridine synthase NRL19_08025 PF01039 Carboxyl transferase domain NRL19_08025 PF17848 Acetyl-coA carboxylase zinc finger domain NRL19_08030 PF02875 Mur ligase family, glutamate ligase domain NRL19_08030 PF08245 Mur ligase middle domain NRL19_08035 PF05036 Sporulation related domain NRL19_08040 PF04358 DsrC like protein NRL19_08045 PF12805 FUSC-like inner membrane protein yccS NRL19_08050 PF01027 Inhibitor of apoptosis-promoting Bax1 NRL19_08060 PF07715 TonB-dependent Receptor Plug Domain NRL19_08060 PF00593 TonB dependent receptor NRL19_08060 PF07660 Secretin and TonB N terminus short domain NRL19_08070 PF04303 PrpF protein NRL19_08075 PF00330 Aconitase family (aconitate hydratase) NRL19_08075 PF00694 Aconitase C-terminal domain NRL19_08080 PF00285 Citrate synthase, C-terminal domain NRL19_08090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_08090 PF08447 PAS fold NRL19_08095 PF00990 Diguanylate cyclase, GGDEF domain NRL19_08095 PF13426 PAS domain NRL19_08095 PF00563 EAL domain NRL19_08100 PF00849 RNA pseudouridylate synthase NRL19_08110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRL19_08115 PF04209 homogentisate 1,2-dioxygenase NRL19_08125 PF14497 Glutathione S-transferase, C-terminal domain NRL19_08125 PF02798 Glutathione S-transferase, N-terminal domain NRL19_08140 PF00733 Asparagine synthase NRL19_08140 PF13537 Glutamine amidotransferase domain NRL19_08155 PF13344 Haloacid dehalogenase-like hydrolase NRL19_08160 PF00962 Adenosine/AMP deaminase NRL19_08165 PF00107 Zinc-binding dehydrogenase NRL19_08165 PF08240 Alcohol dehydrogenase GroES-like domain NRL19_08170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRL19_08175 PF03471 Transporter associated domain NRL19_08175 PF03741 Integral membrane protein TerC family NRL19_08190 PF13183 4Fe-4S dicluster domain NRL19_08190 PF02913 FAD linked oxidases, C-terminal domain NRL19_08190 PF01565 FAD binding domain NRL19_08200 PF03061 Thioesterase superfamily NRL19_08205 PF03880 DbpA RNA binding domain NRL19_08205 PF00270 DEAD/DEAH box helicase NRL19_08205 PF00271 Helicase conserved C-terminal domain NRL19_08215 PF08448 PAS fold NRL19_08215 PF00563 EAL domain NRL19_08215 PF00990 Diguanylate cyclase, GGDEF domain NRL19_08215 PF08447 PAS fold NRL19_08220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_08220 PF03466 LysR substrate binding domain NRL19_08225 PF07690 Major Facilitator Superfamily NRL19_08230 PF13726 Na+-H+ antiporter family NRL19_08230 PF03553 Na+/H+ antiporter family NRL19_08235 PF00929 Exonuclease NRL19_08240 PF12729 Four helix bundle sensory module for signal transduction NRL19_08240 PF00672 HAMP domain NRL19_08240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_08245 PF00691 OmpA family NRL19_08245 PF18393 MotY N-terminal domain NRL19_08250 PF00459 Inositol monophosphatase family NRL19_08260 PF02798 Glutathione S-transferase, N-terminal domain NRL19_08260 PF00043 Glutathione S-transferase, C-terminal domain NRL19_08265 PF02798 Glutathione S-transferase, N-terminal domain NRL19_08265 PF00043 Glutathione S-transferase, C-terminal domain NRL19_08275 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_08280 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_08280 PF12911 N-terminal TM domain of oligopeptide transport permease C NRL19_08285 PF00005 ABC transporter NRL19_08285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRL19_08290 PF07690 Major Facilitator Superfamily NRL19_08300 PF05164 Cell division protein ZapA NRL19_08305 PF03695 Uncharacterised protein family (UPF0149) NRL19_08310 PF01494 FAD binding domain NRL19_08315 PF01494 FAD binding domain NRL19_08320 PF08669 Glycine cleavage T-protein C-terminal barrel domain NRL19_08320 PF01571 Aminomethyltransferase folate-binding domain NRL19_08325 PF01597 Glycine cleavage H-protein NRL19_08330 PF02347 Glycine cleavage system P-protein NRL19_08340 PF00501 AMP-binding enzyme NRL19_08340 PF13193 AMP-binding enzyme C-terminal domain NRL19_08340 PF00668 Condensation domain NRL19_08340 PF08241 Methyltransferase domain NRL19_08340 PF00391 PEP-utilising enzyme, mobile domain NRL19_08340 PF00550 Phosphopantetheine attachment site NRL19_08340 PF00975 Thioesterase domain NRL19_08350 PF07690 Major Facilitator Superfamily NRL19_08355 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRL19_08355 PF13192 Thioredoxin domain NRL19_08360 PF00578 AhpC/TSA family NRL19_08360 PF10417 C-terminal domain of 1-Cys peroxiredoxin NRL19_08365 PF01610 Transposase NRL19_08365 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_08365 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_08370 PF00571 CBS domain NRL19_08375 PF02547 Queuosine biosynthesis protein NRL19_08380 PF01702 Queuine tRNA-ribosyltransferase NRL19_08385 PF02699 Preprotein translocase subunit NRL19_08390 PF02355 Protein export membrane protein NRL19_08390 PF13721 SecD export protein N-terminal TM region NRL19_08390 PF07549 SecD/SecF GG Motif NRL19_08395 PF02355 Protein export membrane protein NRL19_08395 PF07549 SecD/SecF GG Motif NRL19_08400 PF00581 Rhodanese-like domain NRL19_08405 PF07719 Tetratricopeptide repeat NRL19_08405 PF13181 Tetratricopeptide repeat NRL19_08410 PF01136 Peptidase family U32 NRL19_08415 PF01136 Peptidase family U32 NRL19_08420 PF02036 SCP-2 sterol transfer family NRL19_08425 PF00588 SpoU rRNA Methylase family NRL19_08430 PF02082 Transcriptional regulator NRL19_08435 PF00266 Aminotransferase class-V NRL19_08440 PF01592 NifU-like N terminal domain NRL19_08445 PF01521 Iron-sulphur cluster biosynthesis NRL19_08450 PF00226 DnaJ domain NRL19_08450 PF07743 HSCB C-terminal oligomerisation domain NRL19_08455 PF00012 Hsp70 protein NRL19_08460 PF00111 2Fe-2S iron-sulfur cluster binding domain NRL19_08465 PF12404 Peptidase NRL19_08465 PF00883 Cytosol aminopeptidase family, catalytic domain NRL19_08470 PF00883 Cytosol aminopeptidase family, catalytic domain NRL19_08470 PF12404 Peptidase NRL19_08475 PF00334 Nucleoside diphosphate kinase NRL19_08480 PF04055 Radical SAM superfamily NRL19_08490 PF13464 Domain of unknown function (DUF4115) NRL19_08495 PF04551 GcpE protein NRL19_08500 PF13393 Histidyl-tRNA synthetase NRL19_08500 PF03129 Anticodon binding domain NRL19_08505 PF09976 Tetratricopeptide repeat-like domain NRL19_08510 PF13360 PQQ-like domain NRL19_08515 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NRL19_08515 PF01926 50S ribosome-binding GTPase NRL19_08525 PF01610 Transposase NRL19_08525 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_08525 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_08545 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRL19_08545 PF01464 Transglycosylase SLT domain NRL19_08550 PF02769 AIR synthase related protein, C-terminal domain NRL19_08550 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NRL19_08550 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NRL19_08555 PF00361 Proton-conducting membrane transporter NRL19_08560 PF00361 Proton-conducting membrane transporter NRL19_08565 PF00361 Proton-conducting membrane transporter NRL19_08565 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NRL19_08570 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NRL19_08575 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NRL19_08580 PF12838 4Fe-4S dicluster domain NRL19_08585 PF00146 NADH dehydrogenase NRL19_08590 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NRL19_08590 PF00384 Molybdopterin oxidoreductase NRL19_08590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRL19_08595 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NRL19_08595 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NRL19_08605 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NRL19_08605 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NRL19_08610 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NRL19_08615 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NRL19_08620 PF00691 OmpA family NRL19_08620 PF13677 Membrane MotB of proton-channel complex MotA/MotB NRL19_08625 PF01618 MotA/TolQ/ExbB proton channel family NRL19_08645 PF04536 TPM domain NRL19_08655 PF03411 Penicillin-insensitive murein endopeptidase NRL19_08665 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NRL19_08670 PF00248 Aldo/keto reductase family NRL19_08685 PF01212 Beta-eliminating lyase NRL19_08695 PF00072 Response regulator receiver domain NRL19_08695 PF00486 Transcriptional regulatory protein, C terminal NRL19_08700 PF03466 LysR substrate binding domain NRL19_08700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_08715 PF03806 AbgT putative transporter family NRL19_08720 PF00881 Nitroreductase family NRL19_08735 PF07690 Major Facilitator Superfamily NRL19_08740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_08740 PF03466 LysR substrate binding domain NRL19_08745 PF00925 GTP cyclohydrolase II NRL19_08750 PF02224 Cytidylate kinase NRL19_08755 PF00575 S1 RNA binding domain NRL19_08760 PF00216 Bacterial DNA-binding protein NRL19_08770 PF18073 Rubredoxin metal binding domain NRL19_08775 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NRL19_08790 PF06508 Queuosine biosynthesis protein QueC NRL19_08795 PF04055 Radical SAM superfamily NRL19_08800 PF12843 Putative quorum-sensing-regulated virulence factor NRL19_08805 PF01923 Cobalamin adenosyltransferase NRL19_08810 PF00816 H-NS histone family NRL19_08815 PF03553 Na+/H+ antiporter family NRL19_08820 PF00265 Thymidine kinase NRL19_08830 PF10722 Putative bacterial sensory transduction regulator NRL19_08850 PF01418 Helix-turn-helix domain, rpiR family NRL19_08850 PF01380 SIS domain NRL19_08855 PF00367 phosphotransferase system, EIIB NRL19_08855 PF02378 Phosphotransferase system, EIIC NRL19_08855 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRL19_08860 PF00232 Glycosyl hydrolase family 1 NRL19_08875 PF00141 Peroxidase NRL19_08885 PF01609 Transposase DDE domain NRL19_08885 PF13808 DDE_Tnp_1-associated NRL19_08890 PF07804 HipA-like C-terminal domain NRL19_08890 PF13657 HipA N-terminal domain NRL19_08975 PF00563 EAL domain NRL19_08975 PF00990 Diguanylate cyclase, GGDEF domain NRL19_08975 PF03707 Bacterial signalling protein N terminal repeat NRL19_08985 PF00672 HAMP domain NRL19_08985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_08985 PF00512 His Kinase A (phospho-acceptor) domain NRL19_08985 PF01627 Hpt domain NRL19_08985 PF00072 Response regulator receiver domain NRL19_08985 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRL19_08990 PF03707 Bacterial signalling protein N terminal repeat NRL19_08990 PF00990 Diguanylate cyclase, GGDEF domain NRL19_08990 PF00563 EAL domain NRL19_09025 PF00072 Response regulator receiver domain NRL19_09025 PF00486 Transcriptional regulatory protein, C terminal NRL19_09030 PF00512 His Kinase A (phospho-acceptor) domain NRL19_09030 PF00072 Response regulator receiver domain NRL19_09030 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRL19_09030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_09040 PF13188 PAS domain NRL19_09040 PF00158 Sigma-54 interaction domain NRL19_09040 PF02954 Bacterial regulatory protein, Fis family NRL19_09045 PF02653 Branched-chain amino acid transport system / permease component NRL19_09055 PF00005 ABC transporter NRL19_09055 PF12399 Branched-chain amino acid ATP-binding cassette transporter NRL19_09060 PF00005 ABC transporter NRL19_09065 PF01774 UreD urease accessory protein NRL19_09070 PF00547 Urease, gamma subunit NRL19_09075 PF00699 Urease beta subunit NRL19_09080 PF00449 Urease alpha-subunit, N-terminal domain NRL19_09080 PF01979 Amidohydrolase family NRL19_09085 PF02814 UreE urease accessory protein, N-terminal domain NRL19_09085 PF05194 UreE urease accessory protein, C-terminal domain NRL19_09095 PF01730 UreF NRL19_09100 PF02492 CobW/HypB/UreG, nucleotide-binding domain NRL19_09145 PF02646 RmuC family NRL19_09155 PF05598 Transposase domain (DUF772) NRL19_09155 PF01609 Transposase DDE domain NRL19_09165 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NRL19_09165 PF13538 UvrD-like helicase C-terminal domain NRL19_09165 PF14490 Helix-hairpin-helix containing domain NRL19_09205 PF01548 Transposase NRL19_09205 PF02371 Transposase IS116/IS110/IS902 family NRL19_09245 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NRL19_09245 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NRL19_09250 PF01053 Cys/Met metabolism PLP-dependent enzyme NRL19_09260 PF13460 NAD(P)H-binding NRL19_09265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_09265 PF03466 LysR substrate binding domain NRL19_09270 PF02311 AraC-like ligand binding domain NRL19_09270 PF12833 Helix-turn-helix domain NRL19_09275 PF12792 CSS motif domain associated with EAL NRL19_09275 PF00563 EAL domain NRL19_09280 PF00990 Diguanylate cyclase, GGDEF domain NRL19_09285 PF00593 TonB dependent receptor NRL19_09285 PF07715 TonB-dependent Receptor Plug Domain NRL19_09295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_09295 PF03466 LysR substrate binding domain NRL19_09300 PF01717 Cobalamin-independent synthase, Catalytic domain NRL19_09300 PF08267 Cobalamin-independent synthase, N-terminal domain NRL19_09310 PF01743 Poly A polymerase head domain NRL19_09310 PF00571 CBS domain NRL19_09315 PF07969 Amidohydrolase family NRL19_09325 PF01266 FAD dependent oxidoreductase NRL19_09330 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NRL19_09340 PF00768 D-alanyl-D-alanine carboxypeptidase NRL19_09345 PF03918 Cytochrome C biogenesis protein NRL19_09350 PF08534 Redoxin NRL19_09355 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NRL19_09355 PF01578 Cytochrome C assembly protein NRL19_09360 PF03916 Polysulphide reductase, NrfD NRL19_09365 PF00037 4Fe-4S binding domain NRL19_09365 PF13247 4Fe-4S dicluster domain NRL19_09370 PF13435 Cytochrome c554 and c-prime NRL19_09370 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) NRL19_09375 PF02335 Cytochrome c552 NRL19_09385 PF02754 Cysteine-rich domain NRL19_09385 PF13183 4Fe-4S dicluster domain NRL19_09395 PF00890 FAD binding domain NRL19_09400 PF04324 BFD-like [2Fe-2S] binding domain NRL19_09400 PF01266 FAD dependent oxidoreductase NRL19_09405 PF02810 SEC-C motif NRL19_09410 PF17200 Single Cache domain 2 NRL19_09410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_09410 PF00672 HAMP domain NRL19_09415 PF00480 ROK family NRL19_09415 PF01047 MarR family NRL19_09420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_09420 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NRL19_09420 PF17203 Single cache domain 3 NRL19_09420 PF00989 PAS fold NRL19_09425 PF00072 Response regulator receiver domain NRL19_09430 PF01970 Tripartite tricarboxylate transporter TctA family NRL19_09440 PF03401 Tripartite tricarboxylate transporter family receptor NRL19_09445 PF01551 Peptidase family M23 NRL19_09445 PF01464 Transglycosylase SLT domain NRL19_09445 PF10145 Phage-related minor tail protein NRL19_09450 PF06826 Predicted Permease Membrane Region NRL19_09450 PF02080 TrkA-C domain NRL19_09460 PF04851 Type III restriction enzyme, res subunit NRL19_09460 PF02151 UvrB/uvrC motif NRL19_09460 PF12344 Ultra-violet resistance protein B NRL19_09460 PF17757 UvrB interaction domain NRL19_09460 PF00271 Helicase conserved C-terminal domain NRL19_09470 PF09335 SNARE associated Golgi protein NRL19_09475 PF02600 Disulfide bond formation protein DsbB NRL19_09480 PF06450 Bacterial Na+/H+ antiporter B (NhaB) NRL19_09485 PF00392 Bacterial regulatory proteins, gntR family NRL19_09485 PF07840 FadR C-terminal domain NRL19_09490 PF04293 SpoVR like protein NRL19_09495 PF04285 Protein of unknown function (DUF444) NRL19_09500 PF06798 PrkA serine protein kinase C-terminal domain NRL19_09500 PF08298 PrkA AAA domain NRL19_09510 PF00270 DEAD/DEAH box helicase NRL19_09510 PF09382 RQC domain NRL19_09510 PF16124 RecQ zinc-binding NRL19_09510 PF00570 HRDC domain NRL19_09510 PF00271 Helicase conserved C-terminal domain NRL19_09515 PF00375 Sodium:dicarboxylate symporter family NRL19_09520 PF03222 Tryptophan/tyrosine permease family NRL19_09525 PF00293 NUDIX domain NRL19_09530 PF04715 Anthranilate synthase component I, N terminal region NRL19_09530 PF00425 chorismate binding enzyme NRL19_09550 PF00343 Carbohydrate phosphorylase NRL19_09560 PF00939 Sodium:sulfate symporter transmembrane region NRL19_09565 PF00085 Thioredoxin NRL19_09570 PF00672 HAMP domain NRL19_09570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_09570 PF01627 Hpt domain NRL19_09570 PF00512 His Kinase A (phospho-acceptor) domain NRL19_09570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRL19_09570 PF00072 Response regulator receiver domain NRL19_09575 PF00005 ABC transporter NRL19_09575 PF00664 ABC transporter transmembrane region NRL19_09580 PF00005 ABC transporter NRL19_09580 PF00664 ABC transporter transmembrane region NRL19_09615 PF01575 MaoC like domain NRL19_09640 PF08543 Phosphomethylpyrimidine kinase NRL19_09645 PF03992 Antibiotic biosynthesis monooxygenase NRL19_09650 PF13673 Acetyltransferase (GNAT) domain NRL19_09660 PF01928 CYTH domain NRL19_09675 PF00583 Acetyltransferase (GNAT) family NRL19_09680 PF00270 DEAD/DEAH box helicase NRL19_09680 PF00271 Helicase conserved C-terminal domain NRL19_09685 PF00255 Glutathione peroxidase NRL19_09695 PF07478 D-ala D-ala ligase C-terminus NRL19_09695 PF01820 D-ala D-ala ligase N-terminus NRL19_09700 PF03942 DTW domain NRL19_09710 PF01925 Sulfite exporter TauE/SafE NRL19_09715 PF03466 LysR substrate binding domain NRL19_09715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_09735 PF11398 Protein of unknown function (DUF2813) NRL19_09780 PF00883 Cytosol aminopeptidase family, catalytic domain NRL19_09780 PF02789 Cytosol aminopeptidase family, N-terminal domain NRL19_09785 PF13419 Haloacid dehalogenase-like hydrolase NRL19_09790 PF07687 Peptidase dimerisation domain NRL19_09790 PF01546 Peptidase family M20/M25/M40 NRL19_09800 PF00365 Phosphofructokinase NRL19_09805 PF00121 Triosephosphate isomerase NRL19_09810 PF02698 DUF218 domain NRL19_09815 PF13847 Methyltransferase domain NRL19_09820 PF17192 MukF middle domain NRL19_09820 PF03882 MukF winged-helix domain NRL19_09820 PF17193 MukF C-terminal domain NRL19_09825 PF04288 MukE-like family NRL19_09830 PF16330 MukB hinge domain NRL19_09830 PF04310 MukB N-terminal NRL19_09845 PF05036 Sporulation related domain NRL19_09845 PF03330 Lytic transglycolase NRL19_09885 PF01810 LysE type translocator NRL19_09900 PF03831 PhnA domain NRL19_09900 PF08274 PhnA Zinc-Ribbon NRL19_09945 PF01713 Smr domain NRL19_09950 PF05175 Methyltransferase small domain NRL19_09955 PF01264 Chorismate synthase NRL19_09965 PF00270 DEAD/DEAH box helicase NRL19_09965 PF00271 Helicase conserved C-terminal domain NRL19_09980 PF03222 Tryptophan/tyrosine permease family NRL19_09985 PF00356 Bacterial regulatory proteins, lacI family NRL19_09985 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRL19_09990 PF00381 PTS HPr component phosphorylation site NRL19_09990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRL19_09995 PF00294 pfkB family carbohydrate kinase NRL19_10000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRL19_10000 PF02378 Phosphotransferase system, EIIC NRL19_10005 PF06945 Protein of unknown function (DUF1289) NRL19_10010 PF06725 3D domain NRL19_10010 PF03562 MltA specific insert domain NRL19_10020 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_10020 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_10020 PF01610 Transposase NRL19_10030 PF00111 2Fe-2S iron-sulfur cluster binding domain NRL19_10035 PF00268 Ribonucleotide reductase, small chain NRL19_10040 PF00317 Ribonucleotide reductase, all-alpha domain NRL19_10040 PF02867 Ribonucleotide reductase, barrel domain NRL19_10040 PF03477 ATP cone domain NRL19_10045 PF13419 Haloacid dehalogenase-like hydrolase NRL19_10055 PF03989 DNA gyrase C-terminal domain, beta-propeller NRL19_10055 PF00521 DNA gyrase/topoisomerase IV, subunit A NRL19_10075 PF07282 Putative transposase DNA-binding domain NRL19_10075 PF01385 Probable transposase NRL19_10075 PF12323 Helix-turn-helix domain NRL19_10110 PF13737 Transposase DDE domain NRL19_10115 PF03129 Anticodon binding domain NRL19_10115 PF02824 TGS domain NRL19_10115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NRL19_10115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NRL19_10120 PF05198 Translation initiation factor IF-3, N-terminal domain NRL19_10120 PF00707 Translation initiation factor IF-3, C-terminal domain NRL19_10125 PF01632 Ribosomal protein L35 NRL19_10130 PF00453 Ribosomal protein L20 NRL19_10135 PF01409 tRNA synthetases class II core domain (F) NRL19_10135 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NRL19_10140 PF03483 B3/4 domain NRL19_10140 PF03147 Ferredoxin-fold anticodon binding domain NRL19_10140 PF01588 Putative tRNA binding domain NRL19_10140 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NRL19_10140 PF03484 tRNA synthetase B5 domain NRL19_10145 PF00216 Bacterial DNA-binding protein NRL19_10150 PF00512 His Kinase A (phospho-acceptor) domain NRL19_10150 PF09456 RcsC Alpha-Beta-Loop (ABL) NRL19_10150 PF00072 Response regulator receiver domain NRL19_10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_10165 PF02146 Sir2 family NRL19_10175 PF00563 EAL domain NRL19_10175 PF00990 Diguanylate cyclase, GGDEF domain NRL19_10175 PF03707 Bacterial signalling protein N terminal repeat NRL19_10185 PF00356 Bacterial regulatory proteins, lacI family NRL19_10190 PF00294 pfkB family carbohydrate kinase NRL19_10195 PF13407 Periplasmic binding protein domain NRL19_10200 PF02653 Branched-chain amino acid transport system / permease component NRL19_10205 PF00005 ABC transporter NRL19_10210 PF05025 RbsD / FucU transport protein family NRL19_10215 PF00043 Glutathione S-transferase, C-terminal domain NRL19_10215 PF02798 Glutathione S-transferase, N-terminal domain NRL19_10230 PF01171 PP-loop family NRL19_10235 PF00582 Universal stress protein family NRL19_10240 PF00027 Cyclic nucleotide-binding domain NRL19_10240 PF13545 Crp-like helix-turn-helix domain NRL19_10255 PF00403 Heavy-metal-associated domain NRL19_10265 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NRL19_10265 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NRL19_10280 PF00115 Cytochrome C and Quinol oxidase polypeptide I NRL19_10290 PF13185 GAF domain NRL19_10295 PF04352 ProQ/FINO family NRL19_10295 PF17516 ProQ C-terminal domain NRL19_10300 PF17804 Tail specific protease N-terminal domain NRL19_10300 PF03572 Peptidase family S41 NRL19_10300 PF00595 PDZ domain NRL19_10300 PF11818 C-terminal domain of tail specific protease (DUF3340) NRL19_10305 PF11940 Domain of unknown function (DUF3458) Ig-like fold NRL19_10305 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NRL19_10305 PF01433 Peptidase family M1 domain NRL19_10315 PF05088 Bacterial NAD-glutamate dehydrogenase NRL19_10320 PF01180 Dihydroorotate dehydrogenase NRL19_10325 PF07126 Cell-division protein ZapC NRL19_10330 PF01170 Putative RNA methylase family UPF0020 NRL19_10330 PF10672 S-adenosylmethionine-dependent methyltransferase NRL19_10330 PF02926 THUMP domain NRL19_10340 PF12848 ABC transporter NRL19_10340 PF16326 ABC transporter C-terminal domain NRL19_10340 PF00005 ABC transporter NRL19_10350 PF04957 Ribosome modulation factor NRL19_10355 PF07977 FabA-like domain NRL19_10360 PF13654 AAA domain NRL19_10360 PF05362 Lon protease (S16) C-terminal proteolytic domain NRL19_10470 PF13808 DDE_Tnp_1-associated NRL19_10470 PF01609 Transposase DDE domain NRL19_10490 PF01609 Transposase DDE domain NRL19_10490 PF13808 DDE_Tnp_1-associated NRL19_10560 PF01695 IstB-like ATP binding protein NRL19_10565 PF00665 Integrase core domain NRL19_10635 PF05840 Bacteriophage replication gene A protein (GPA) NRL19_10675 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_10675 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_10675 PF01610 Transposase NRL19_10690 PF07130 YebG protein NRL19_10700 PF04403 Paraquat-inducible protein A NRL19_10705 PF02470 MlaD protein NRL19_10710 PF01189 16S rRNA methyltransferase RsmB/F NRL19_10710 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF NRL19_10710 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF NRL19_10720 PF00589 Phage integrase family NRL19_10725 PF01026 TatD related DNase NRL19_10730 PF09115 DNA polymerase III, delta subunit, C terminal NRL19_10735 PF02223 Thymidylate kinase NRL19_10740 PF02618 YceG-like family NRL19_10745 PF01063 Amino-transferase class IV NRL19_10750 PF00109 Beta-ketoacyl synthase, N-terminal domain NRL19_10750 PF02801 Beta-ketoacyl synthase, C-terminal domain NRL19_10755 PF00550 Phosphopantetheine attachment site NRL19_10765 PF00698 Acyl transferase domain NRL19_10770 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NRL19_10770 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NRL19_10775 PF02504 Fatty acid synthesis protein NRL19_10780 PF01783 Ribosomal L32p protein family NRL19_10785 PF02620 Large ribosomal RNA subunit accumulation protein YceD NRL19_10795 PF02545 Maf-like protein NRL19_10800 PF00849 RNA pseudouridylate synthase NRL19_10800 PF01479 S4 domain NRL19_10805 PF12111 Polyribonucleotide phosphorylase C terminal NRL19_10805 PF10150 Ribonuclease E/G family NRL19_10805 PF00575 S1 RNA binding domain NRL19_10810 PF01384 Phosphate transporter family NRL19_10815 PF00692 dUTPase NRL19_10820 PF00485 Phosphoribulokinase / Uridine kinase family NRL19_10825 PF10609 NUBPL iron-transfer P-loop NTPase NRL19_10830 PF01588 Putative tRNA binding domain NRL19_10830 PF09334 tRNA synthetases class I (M) NRL19_10830 PF08264 Anticodon-binding domain of tRNA NRL19_10840 PF00708 Acylphosphatase NRL19_10845 PF00672 HAMP domain NRL19_10845 PF12729 Four helix bundle sensory module for signal transduction NRL19_10845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_10850 PF10672 S-adenosylmethionine-dependent methyltransferase NRL19_10850 PF17785 PUA-like domain NRL19_10855 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_10855 PF01610 Transposase NRL19_10855 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_10870 PF00586 AIR synthase related protein, N-terminal domain NRL19_10870 PF02769 AIR synthase related protein, C-terminal domain NRL19_10880 PF00753 Metallo-beta-lactamase superfamily NRL19_10885 PF00072 Response regulator receiver domain NRL19_10890 PF00072 Response regulator receiver domain NRL19_10900 PF00672 HAMP domain NRL19_10900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_10900 PF00512 His Kinase A (phospho-acceptor) domain NRL19_10900 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRL19_10900 PF00072 Response regulator receiver domain NRL19_10900 PF01627 Hpt domain NRL19_10905 PF01386 Ribosomal L25p family NRL19_10915 PF00271 Helicase conserved C-terminal domain NRL19_10915 PF11898 Domain of unknown function (DUF3418) NRL19_10915 PF00270 DEAD/DEAH box helicase NRL19_10915 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NRL19_10915 PF04408 Helicase associated domain (HA2) NRL19_10920 PF00571 CBS domain NRL19_10920 PF01368 DHH family NRL19_10920 PF02272 DHHA1 domain NRL19_10920 PF01743 Poly A polymerase head domain NRL19_10925 PF00196 Bacterial regulatory proteins, luxR family NRL19_10925 PF00072 Response regulator receiver domain NRL19_10935 PF13610 DDE domain NRL19_10945 PF00809 Pterin binding enzyme NRL19_10950 PF00893 Small Multidrug Resistance protein NRL19_10965 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_10965 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_10965 PF01610 Transposase NRL19_10975 PF01609 Transposase DDE domain NRL19_10985 PF13495 Phage integrase, N-terminal SAM-like domain NRL19_10985 PF00589 Phage integrase family NRL19_10990 PF07670 Nucleoside recognition NRL19_10995 PF02678 Pirin NRL19_10995 PF05726 Pirin C-terminal cupin domain NRL19_11000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_11000 PF03466 LysR substrate binding domain NRL19_11005 PF02575 YbaB/EbfC DNA-binding family NRL19_11010 PF12169 DNA polymerase III subunits gamma and tau domain III NRL19_11010 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NRL19_11010 PF12170 DNA polymerase III tau subunit V interacting with alpha NRL19_11015 PF00156 Phosphoribosyl transferase domain NRL19_11020 PF04304 Protein of unknown function (DUF454) NRL19_11025 PF01207 Dihydrouridine synthase (Dus) NRL19_11035 PF00892 EamA-like transporter family NRL19_11045 PF01612 3'-5' exonuclease NRL19_11045 PF00570 HRDC domain NRL19_11050 PF00501 AMP-binding enzyme NRL19_11050 PF13193 AMP-binding enzyme C-terminal domain NRL19_11055 PF00561 alpha/beta hydrolase fold NRL19_11065 PF00814 Glycoprotease family NRL19_11070 PF13307 Helicase C-terminal domain NRL19_11070 PF04851 Type III restriction enzyme, res subunit NRL19_11080 PF01634 ATP phosphoribosyltransferase NRL19_11080 PF08029 HisG, C-terminal domain NRL19_11085 PF00815 Histidinol dehydrogenase NRL19_11090 PF00155 Aminotransferase class I and II NRL19_11095 PF00475 Imidazoleglycerol-phosphate dehydratase NRL19_11095 PF08645 Polynucleotide kinase 3 phosphatase NRL19_11100 PF00117 Glutamine amidotransferase class-I NRL19_11105 PF00977 Histidine biosynthesis protein NRL19_11110 PF00072 Response regulator receiver domain NRL19_11115 PF00990 Diguanylate cyclase, GGDEF domain NRL19_11115 PF08448 PAS fold NRL19_11120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_11120 PF00512 His Kinase A (phospho-acceptor) domain NRL19_11120 PF01627 Hpt domain NRL19_11120 PF00072 Response regulator receiver domain NRL19_11125 PF00977 Histidine biosynthesis protein NRL19_11130 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NRL19_11130 PF01502 Phosphoribosyl-AMP cyclohydrolase NRL19_11140 PF01609 Transposase DDE domain NRL19_11140 PF13808 DDE_Tnp_1-associated NRL19_11150 PF01609 Transposase DDE domain NRL19_11155 PF13737 Transposase DDE domain NRL19_11160 PF01609 Transposase DDE domain NRL19_11170 PF00501 AMP-binding enzyme NRL19_11170 PF13193 AMP-binding enzyme C-terminal domain NRL19_11175 PF05433 Glycine zipper 2TM domain NRL19_11190 PF01032 FecCD transport family NRL19_11195 PF00005 ABC transporter NRL19_11200 PF07690 Major Facilitator Superfamily NRL19_11210 PF07152 YaeQ protein NRL19_11220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NRL19_11220 PF00378 Enoyl-CoA hydratase/isomerase NRL19_11220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NRL19_11225 PF00108 Thiolase, N-terminal domain NRL19_11225 PF02803 Thiolase, C-terminal domain NRL19_11230 PF07726 ATPase family associated with various cellular activities (AAA) NRL19_11230 PF17863 AAA lid domain NRL19_11235 PF01882 Protein of unknown function DUF58 NRL19_11260 PF04542 Sigma-70 region 2 NRL19_11260 PF08281 Sigma-70, region 4 NRL19_11270 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NRL19_11275 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NRL19_11280 PF00563 EAL domain NRL19_11280 PF08668 HDOD domain NRL19_11285 PF02803 Thiolase, C-terminal domain NRL19_11285 PF00108 Thiolase, N-terminal domain NRL19_11290 PF00376 MerR family regulatory protein NRL19_11290 PF09278 MerR, DNA binding NRL19_11295 PF00375 Sodium:dicarboxylate symporter family NRL19_11300 PF06865 Pyrimidine/purine nucleoside phosphorylase NRL19_11305 PF03313 Serine dehydratase alpha chain NRL19_11305 PF03315 Serine dehydratase beta chain NRL19_11310 PF03313 Serine dehydratase alpha chain NRL19_11310 PF03315 Serine dehydratase beta chain NRL19_11315 PF13406 Transglycosylase SLT domain NRL19_11320 PF05166 YcgL domain NRL19_11325 PF03775 Septum formation inhibitor MinC, C-terminal domain NRL19_11325 PF05209 Septum formation inhibitor MinC, N-terminal domain NRL19_11330 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NRL19_11335 PF03776 Septum formation topological specificity factor MinE NRL19_11340 PF04269 Protein of unknown function, DUF440 NRL19_11345 PF00912 Transglycosylase NRL19_11350 PF04269 Protein of unknown function, DUF440 NRL19_11360 PF17783 CvfB-like winged helix domain NRL19_11360 PF13509 S1 domain NRL19_11365 PF12323 Helix-turn-helix domain NRL19_11365 PF07282 Putative transposase DNA-binding domain NRL19_11365 PF01385 Probable transposase NRL19_11395 PF02525 Flavodoxin-like fold NRL19_11400 PF00892 EamA-like transporter family NRL19_11405 PF02222 ATP-grasp domain NRL19_11405 PF01370 NAD dependent epimerase/dehydratase family NRL19_11410 PF13419 Haloacid dehalogenase-like hydrolase NRL19_11425 PF00677 Lumazine binding domain NRL19_11430 PF06786 Uncharacterised protein family (UPF0253) NRL19_11435 PF01554 MatE NRL19_11465 PF00136 DNA polymerase family B NRL19_11465 PF03104 DNA polymerase family B, exonuclease domain NRL19_11470 PF02678 Pirin NRL19_11470 PF05726 Pirin C-terminal cupin domain NRL19_11480 PF03279 Bacterial lipid A biosynthesis acyltransferase NRL19_11485 PF03279 Bacterial lipid A biosynthesis acyltransferase NRL19_11495 PF03466 LysR substrate binding domain NRL19_11495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_11500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NRL19_11500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRL19_11505 PF01261 Xylose isomerase-like TIM barrel NRL19_11510 PF00933 Glycosyl hydrolase family 3 N terminal domain NRL19_11520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_11520 PF03466 LysR substrate binding domain NRL19_11530 PF00232 Glycosyl hydrolase family 1 NRL19_11535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_11535 PF03466 LysR substrate binding domain NRL19_11540 PF00990 Diguanylate cyclase, GGDEF domain NRL19_11540 PF00072 Response regulator receiver domain NRL19_11545 PF00384 Molybdopterin oxidoreductase NRL19_11550 PF02634 FdhD/NarQ family NRL19_11565 PF03466 LysR substrate binding domain NRL19_11565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_11570 PF13407 Periplasmic binding protein domain NRL19_11575 PF00005 ABC transporter NRL19_11580 PF02653 Branched-chain amino acid transport system / permease component NRL19_11585 PF02653 Branched-chain amino acid transport system / permease component NRL19_11590 PF12706 Beta-lactamase superfamily domain NRL19_11615 PF00239 Resolvase, N terminal domain NRL19_11615 PF02796 Helix-turn-helix domain of resolvase NRL19_11635 PF04002 RadC-like JAB domain NRL19_11660 PF01420 Type I restriction modification DNA specificity domain NRL19_11665 PF02384 N-6 DNA Methylase NRL19_11685 PF01925 Sulfite exporter TauE/SafE NRL19_11690 PF13520 Amino acid permease NRL19_11700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NRL19_11700 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NRL19_11705 PF00378 Enoyl-CoA hydratase/isomerase NRL19_11710 PF00378 Enoyl-CoA hydratase/isomerase NRL19_11715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRL19_11715 PF02770 Acyl-CoA dehydrogenase, middle domain NRL19_11715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRL19_11720 PF00171 Aldehyde dehydrogenase family NRL19_11725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRL19_11725 PF02770 Acyl-CoA dehydrogenase, middle domain NRL19_11725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRL19_11730 PF01039 Carboxyl transferase domain NRL19_11735 PF00378 Enoyl-CoA hydratase/isomerase NRL19_11740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NRL19_11740 PF00364 Biotin-requiring enzyme NRL19_11740 PF00289 Biotin carboxylase, N-terminal domain NRL19_11740 PF02785 Biotin carboxylase C-terminal domain NRL19_11745 PF00682 HMGL-like NRL19_11750 PF09278 MerR, DNA binding NRL19_11750 PF00376 MerR family regulatory protein NRL19_11760 PF01184 GPR1/FUN34/yaaH family NRL19_11765 PF06167 Glucose-regulated metallo-peptidase M90 NRL19_11775 PF01235 Sodium:alanine symporter family NRL19_11780 PF00378 Enoyl-CoA hydratase/isomerase NRL19_11795 PF04341 Protein of unknown function, DUF485 NRL19_11800 PF00474 Sodium:solute symporter family NRL19_11805 PF00005 ABC transporter NRL19_11805 PF12848 ABC transporter NRL19_11810 PF13145 PPIC-type PPIASE domain NRL19_11815 PF00216 Bacterial DNA-binding protein NRL19_11820 PF00004 ATPase family associated with various cellular activities (AAA) NRL19_11820 PF02190 ATP-dependent protease La (LON) substrate-binding domain NRL19_11820 PF05362 Lon protease (S16) C-terminal proteolytic domain NRL19_11825 PF07724 AAA domain (Cdc48 subfamily) NRL19_11825 PF10431 C-terminal, D2-small domain, of ClpB protein NRL19_11825 PF06689 ClpX C4-type zinc finger NRL19_11830 PF00574 Clp protease NRL19_11835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRL19_11835 PF05698 Bacterial trigger factor protein (TF) C-terminus NRL19_11835 PF05697 Bacterial trigger factor protein (TF) NRL19_11850 PF02687 FtsX-like permease family NRL19_11850 PF12704 MacB-like periplasmic core domain NRL19_11855 PF00005 ABC transporter NRL19_11860 PF02687 FtsX-like permease family NRL19_11860 PF12704 MacB-like periplasmic core domain NRL19_11870 PF03461 TRCF domain NRL19_11870 PF17757 UvrB interaction domain NRL19_11870 PF00271 Helicase conserved C-terminal domain NRL19_11870 PF00270 DEAD/DEAH box helicase NRL19_11870 PF02559 CarD-like/TRCF domain NRL19_11875 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NRL19_11885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRL19_11890 PF00892 EamA-like transporter family NRL19_11900 PF00300 Histidine phosphatase superfamily (branch 1) NRL19_11905 PF05193 Peptidase M16 inactive domain NRL19_11905 PF00675 Insulinase (Peptidase family M16) NRL19_11905 PF16187 Middle or third domain of peptidase_M16 NRL19_11910 PF05724 Thiopurine S-methyltransferase (TPMT) NRL19_11920 PF01047 MarR family NRL19_11940 PF01609 Transposase DDE domain NRL19_11945 PF00117 Glutamine amidotransferase class-I NRL19_11945 PF00958 GMP synthase C terminal domain NRL19_11945 PF02540 NAD synthase NRL19_11950 PF00571 CBS domain NRL19_11950 PF00478 IMP dehydrogenase / GMP reductase domain NRL19_11960 PF00128 Alpha amylase, catalytic domain NRL19_11960 PF03423 Carbohydrate binding domain (family 25) NRL19_11960 PF01373 Glycosyl hydrolase family 14 NRL19_11970 PF02601 Exonuclease VII, large subunit NRL19_11970 PF13742 OB-fold nucleic acid binding domain NRL19_11975 PF04055 Radical SAM superfamily NRL19_11980 PF00691 OmpA family NRL19_11995 PF18024 Helix-turn-helix domain NRL19_11995 PF00158 Sigma-54 interaction domain NRL19_12000 PF01329 Pterin 4 alpha carbinolamine dehydratase NRL19_12005 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NRL19_12010 PF05128 Domain of unknown function (DUF697) NRL19_12015 PF04317 YcjX-like family, DUF463 NRL19_12025 PF06667 Phage shock protein B NRL19_12030 PF04012 PspA/IM30 family NRL19_12035 PF02954 Bacterial regulatory protein, Fis family NRL19_12035 PF00158 Sigma-54 interaction domain NRL19_12040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRL19_12045 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_12050 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_12050 PF12911 N-terminal TM domain of oligopeptide transport permease C NRL19_12055 PF00005 ABC transporter NRL19_12055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRL19_12060 PF00005 ABC transporter NRL19_12065 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NRL19_12070 PF00356 Bacterial regulatory proteins, lacI family NRL19_12075 PF00367 phosphotransferase system, EIIB NRL19_12075 PF02378 Phosphotransferase system, EIIC NRL19_12080 PF00232 Glycosyl hydrolase family 1 NRL19_12085 PF00156 Phosphoribosyl transferase domain NRL19_12090 PF02674 Colicin V production protein NRL19_12095 PF02403 Seryl-tRNA synthetase N-terminal domain NRL19_12095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NRL19_12100 PF00004 ATPase family associated with various cellular activities (AAA) NRL19_12100 PF16193 AAA C-terminal domain NRL19_12100 PF12002 MgsA AAA+ ATPase C terminal NRL19_12105 PF03548 Outer membrane lipoprotein carrier protein LolA NRL19_12110 PF09397 Ftsk gamma domain NRL19_12110 PF17854 FtsK alpha domain NRL19_12110 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NRL19_12110 PF01580 FtsK/SpoIIIE family NRL19_12115 PF01037 Lrp/AsnC ligand binding domain NRL19_12120 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NRL19_12120 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NRL19_12125 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRL19_12130 PF00990 Diguanylate cyclase, GGDEF domain NRL19_12130 PF05230 MASE2 domain NRL19_12135 PF05433 Glycine zipper 2TM domain NRL19_12140 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NRL19_12145 PF04376 Arginine-tRNA-protein transferase, N terminus NRL19_12145 PF04377 Arginine-tRNA-protein transferase, C terminus NRL19_12150 PF01176 Translation initiation factor 1A / IF-1 NRL19_12155 PF00004 ATPase family associated with various cellular activities (AAA) NRL19_12155 PF07724 AAA domain (Cdc48 subfamily) NRL19_12155 PF17871 AAA lid domain NRL19_12155 PF02861 Clp amino terminal domain, pathogenicity island component NRL19_12155 PF10431 C-terminal, D2-small domain, of ClpB protein NRL19_12160 PF02617 ATP-dependent Clp protease adaptor protein ClpS NRL19_12165 PF00313 'Cold-shock' DNA-binding domain NRL19_12170 PF02774 Semialdehyde dehydrogenase, dimerisation domain NRL19_12170 PF01118 Semialdehyde dehydrogenase, NAD binding domain NRL19_12175 PF00893 Small Multidrug Resistance protein NRL19_12190 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding NRL19_12190 PF18381 YcaO cyclodehydratase C-terminal domain NRL19_12195 PF01226 Formate/nitrite transporter NRL19_12200 PF02901 Pyruvate formate lyase-like NRL19_12200 PF01228 Glycine radical NRL19_12205 PF03692 Putative zinc- or iron-chelating domain NRL19_12225 PF13006 Insertion element 4 transposase N-terminal NRL19_12225 PF01609 Transposase DDE domain NRL19_12230 PF00549 CoA-ligase NRL19_12230 PF02629 CoA binding domain NRL19_12235 PF00549 CoA-ligase NRL19_12235 PF08442 ATP-grasp domain NRL19_12240 PF00364 Biotin-requiring enzyme NRL19_12240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NRL19_12240 PF02817 e3 binding domain NRL19_12245 PF16870 2-oxoglutarate dehydrogenase C-terminal NRL19_12245 PF02779 Transketolase, pyrimidine binding domain NRL19_12245 PF00676 Dehydrogenase E1 component NRL19_12245 PF16078 2-oxoglutarate dehydrogenase N-terminus NRL19_12250 PF13085 2Fe-2S iron-sulfur cluster binding domain NRL19_12255 PF02910 Fumarate reductase flavoprotein C-term NRL19_12255 PF00890 FAD binding domain NRL19_12260 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NRL19_12265 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NRL19_12270 PF00285 Citrate synthase, C-terminal domain NRL19_12285 PF02801 Beta-ketoacyl synthase, C-terminal domain NRL19_12285 PF00109 Beta-ketoacyl synthase, N-terminal domain NRL19_12290 PF01266 FAD dependent oxidoreductase NRL19_12290 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NRL19_12300 PF03606 C4-dicarboxylate anaerobic carrier NRL19_12315 PF01863 Protein of unknown function DUF45 NRL19_12330 PF01197 Ribosomal protein L31 NRL19_12335 PF00444 Ribosomal protein L36 NRL19_12340 PF02311 AraC-like ligand binding domain NRL19_12340 PF12833 Helix-turn-helix domain NRL19_12345 PF02653 Branched-chain amino acid transport system / permease component NRL19_12350 PF00005 ABC transporter NRL19_12355 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRL19_12360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NRL19_12365 PF00596 Class II Aldolase and Adducin N-terminal domain NRL19_12370 PF11762 L-arabinose isomerase C-terminal domain NRL19_12370 PF02610 L-arabinose isomerase NRL19_12375 PF03466 LysR substrate binding domain NRL19_12375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_12380 PF00155 Aminotransferase class I and II NRL19_12385 PF00795 Carbon-nitrogen hydrolase NRL19_12390 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRL19_12400 PF09924 Uncharacterised conserved protein (DUF2156) NRL19_12400 PF03706 Lysylphosphatidylglycerol synthase TM region NRL19_12405 PF00149 Calcineurin-like phosphoesterase NRL19_12440 PF04984 Phage tail sheath protein subtilisin-like domain NRL19_12440 PF17482 Phage tail sheath C-terminal domain NRL19_12450 PF01348 Type II intron maturase NRL19_12450 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NRL19_12560 PF05866 Endodeoxyribonuclease RusA NRL19_12575 PF01555 DNA methylase NRL19_12575 PF18755 Restriction Enzyme Adenine Methylase Associated NRL19_12640 PF05154 TM2 domain NRL19_12655 PF00712 DNA polymerase III beta subunit, N-terminal domain NRL19_12655 PF02767 DNA polymerase III beta subunit, central domain NRL19_12655 PF02768 DNA polymerase III beta subunit, C-terminal domain NRL19_12685 PF00436 Single-strand binding protein family NRL19_12695 PF08411 Exonuclease C-terminal NRL19_12695 PF00929 Exonuclease NRL19_12710 PF03788 LrgA family NRL19_12715 PF04172 LrgB-like family NRL19_12720 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NRL19_12720 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region NRL19_12725 PF00501 AMP-binding enzyme NRL19_12730 PF08891 YfcL protein NRL19_12740 PF03741 Integral membrane protein TerC family NRL19_12745 PF00793 DAHP synthetase I family NRL19_12750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NRL19_12755 PF00266 Aminotransferase class-V NRL19_12760 PF00766 Electron transfer flavoprotein FAD-binding domain NRL19_12760 PF01012 Electron transfer flavoprotein domain NRL19_12765 PF01012 Electron transfer flavoprotein domain NRL19_12775 PF01544 CorA-like Mg2+ transporter protein NRL19_12780 PF11143 Protein of unknown function (DUF2919) NRL19_12795 PF07715 TonB-dependent Receptor Plug Domain NRL19_12795 PF00593 TonB dependent receptor NRL19_12800 PF01032 FecCD transport family NRL19_12805 PF01032 FecCD transport family NRL19_12810 PF00005 ABC transporter NRL19_12815 PF17837 4'-phosphopantetheinyl transferase N-terminal domain NRL19_12815 PF01648 4'-phosphopantetheinyl transferase superfamily NRL19_12820 PF01497 Periplasmic binding protein NRL19_12825 PF00501 AMP-binding enzyme NRL19_12825 PF13193 AMP-binding enzyme C-terminal domain NRL19_12825 PF00668 Condensation domain NRL19_12825 PF07993 Male sterility protein NRL19_12825 PF00550 Phosphopantetheine attachment site NRL19_12830 PF00668 Condensation domain NRL19_12830 PF00975 Thioesterase domain NRL19_12830 PF00550 Phosphopantetheine attachment site NRL19_12830 PF00501 AMP-binding enzyme NRL19_12830 PF13193 AMP-binding enzyme C-terminal domain NRL19_12835 PF07993 Male sterility protein NRL19_12835 PF00668 Condensation domain NRL19_12835 PF00550 Phosphopantetheine attachment site NRL19_12835 PF00501 AMP-binding enzyme NRL19_12835 PF13193 AMP-binding enzyme C-terminal domain NRL19_12845 PF00501 AMP-binding enzyme NRL19_12845 PF00975 Thioesterase domain NRL19_12845 PF00668 Condensation domain NRL19_12845 PF00550 Phosphopantetheine attachment site NRL19_12845 PF13193 AMP-binding enzyme C-terminal domain NRL19_12850 PF00857 Isochorismatase family NRL19_12850 PF00550 Phosphopantetheine attachment site NRL19_12855 PF00501 AMP-binding enzyme NRL19_12855 PF13193 AMP-binding enzyme C-terminal domain NRL19_12860 PF00425 chorismate binding enzyme NRL19_12865 PF07273 Protein of unknown function (DUF1439) NRL19_12875 PF00483 Nucleotidyl transferase NRL19_12880 PF00990 Diguanylate cyclase, GGDEF domain NRL19_12880 PF03707 Bacterial signalling protein N terminal repeat NRL19_12880 PF00563 EAL domain NRL19_12895 PF17200 Single Cache domain 2 NRL19_12895 PF00672 HAMP domain NRL19_12895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_12900 PF00294 pfkB family carbohydrate kinase NRL19_12905 PF01124 MAPEG family NRL19_12910 PF00762 Ferrochelatase NRL19_12915 PF05191 Adenylate kinase, active site lid NRL19_12920 PF00183 Hsp90 protein NRL19_12920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_12925 PF02132 RecR protein NRL19_12925 PF13662 Toprim domain NRL19_12940 PF01740 STAS domain NRL19_12940 PF00916 Sulfate permease family NRL19_12955 PF14403 Circularly permuted ATP-grasp type 2 NRL19_12960 PF14403 Circularly permuted ATP-grasp type 2 NRL19_12960 PF04168 A predicted alpha-helical domain with a conserved ER motif. NRL19_12990 PF03239 Iron permease FTR1 family NRL19_12995 PF01593 Flavin containing amine oxidoreductase NRL19_13015 PF07690 Major Facilitator Superfamily NRL19_13025 PF03600 Citrate transporter NRL19_13035 PF00005 ABC transporter NRL19_13040 PF12704 MacB-like periplasmic core domain NRL19_13040 PF02687 FtsX-like permease family NRL19_13055 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_13055 PF01610 Transposase NRL19_13055 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_13065 PF02589 LUD domain NRL19_13070 PF11870 Domain of unknown function (DUF3390) NRL19_13070 PF13183 4Fe-4S dicluster domain NRL19_13070 PF02589 LUD domain NRL19_13075 PF02754 Cysteine-rich domain NRL19_13080 PF02652 L-lactate permease NRL19_13085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_13085 PF03466 LysR substrate binding domain NRL19_13110 PF01625 Peptide methionine sulfoxide reductase NRL19_13115 PF00696 Amino acid kinase family NRL19_13115 PF00583 Acetyltransferase (GNAT) family NRL19_13120 PF00696 Amino acid kinase family NRL19_13120 PF01842 ACT domain NRL19_13130 PF00884 Sulfatase NRL19_13135 PF01906 Putative heavy-metal-binding NRL19_13140 PF01610 Transposase NRL19_13140 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_13140 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_13145 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRL19_13150 PF05728 Uncharacterised protein family (UPF0227) NRL19_13155 PF08439 Oligopeptidase F NRL19_13155 PF01432 Peptidase family M3 NRL19_13160 PF01432 Peptidase family M3 NRL19_13160 PF08439 Oligopeptidase F NRL19_13165 PF05661 Protein of unknown function (DUF808) NRL19_13175 PF13426 PAS domain NRL19_13175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_13175 PF08447 PAS fold NRL19_13180 PF02355 Protein export membrane protein NRL19_13180 PF07549 SecD/SecF GG Motif NRL19_13185 PF13721 SecD export protein N-terminal TM region NRL19_13185 PF02355 Protein export membrane protein NRL19_13185 PF07549 SecD/SecF GG Motif NRL19_13220 PF01230 HIT domain NRL19_13225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_13225 PF00672 HAMP domain NRL19_13235 PF01979 Amidohydrolase family NRL19_13255 PF00375 Sodium:dicarboxylate symporter family NRL19_13265 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_13265 PF01610 Transposase NRL19_13265 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_13270 PF01168 Alanine racemase, N-terminal domain NRL19_13270 PF00842 Alanine racemase, C-terminal domain NRL19_13275 PF03741 Integral membrane protein TerC family NRL19_13280 PF00005 ABC transporter NRL19_13280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRL19_13285 PF00005 ABC transporter NRL19_13285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRL19_13290 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_13290 PF12911 N-terminal TM domain of oligopeptide transport permease C NRL19_13295 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_13300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRL19_13305 PF01914 MarC family integral membrane protein NRL19_13310 PF00465 Iron-containing alcohol dehydrogenase NRL19_13310 PF00171 Aldehyde dehydrogenase family NRL19_13315 PF00072 Response regulator receiver domain NRL19_13320 PF07694 5TMR of 5TMR-LYT NRL19_13320 PF06580 Histidine kinase NRL19_13325 PF04397 LytTr DNA-binding domain NRL19_13325 PF00072 Response regulator receiver domain NRL19_13330 PF02554 Carbon starvation protein CstA NRL19_13335 PF12794 Mechanosensitive ion channel inner membrane domain 1 NRL19_13335 PF12795 Mechanosensitive ion channel porin domain NRL19_13335 PF00924 Mechanosensitive ion channel NRL19_13340 PF01385 Probable transposase NRL19_13340 PF12323 Helix-turn-helix domain NRL19_13340 PF07282 Putative transposase DNA-binding domain NRL19_13350 PF11742 Protein of unknown function (DUF3302) NRL19_13355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRL19_13355 PF00529 HlyD membrane-fusion protein of T1SS NRL19_13360 PF04851 Type III restriction enzyme, res subunit NRL19_13360 PF00271 Helicase conserved C-terminal domain NRL19_13365 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NRL19_13370 PF00462 Glutaredoxin NRL19_13380 PF00155 Aminotransferase class I and II NRL19_13385 PF03606 C4-dicarboxylate anaerobic carrier NRL19_13395 PF12241 Trans-2-enoyl-CoA reductase catalytic region NRL19_13395 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NRL19_13395 PF07055 Enoyl reductase FAD binding domain NRL19_13410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_13410 PF17200 Single Cache domain 2 NRL19_13410 PF00672 HAMP domain NRL19_13420 PF00892 EamA-like transporter family NRL19_13425 PF02508 Rnf-Nqr subunit, membrane protein NRL19_13430 PF04060 Putative Fe-S cluster NRL19_13435 PF10531 SLBB domain NRL19_13435 PF12838 4Fe-4S dicluster domain NRL19_13435 PF13375 RnfC Barrel sandwich hybrid domain NRL19_13435 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NRL19_13440 PF03116 NQR2, RnfD, RnfE family NRL19_13445 PF04205 FMN-binding domain NRL19_13450 PF02508 Rnf-Nqr subunit, membrane protein NRL19_13455 PF10576 Iron-sulfur binding domain of endonuclease III NRL19_13455 PF00633 Helix-hairpin-helix motif NRL19_13455 PF00730 HhH-GPD superfamily base excision DNA repair protein NRL19_13460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRL19_13465 PF12729 Four helix bundle sensory module for signal transduction NRL19_13465 PF00672 HAMP domain NRL19_13465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_13470 PF02535 ZIP Zinc transporter NRL19_13475 PF01048 Phosphorylase superfamily NRL19_13485 PF01497 Periplasmic binding protein NRL19_13490 PF02719 Polysaccharide biosynthesis protein NRL19_13495 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NRL19_13505 PF02348 Cytidylyltransferase NRL19_13510 PF00202 Aminotransferase class-III NRL19_13525 PF03102 NeuB family NRL19_13525 PF08666 SAF domain NRL19_13565 PF02561 Flagellar protein FliS NRL19_13570 PF07195 Flagellar hook-associated protein 2 C-terminus NRL19_13570 PF02465 Flagellar hook-associated protein 2 N-terminus NRL19_13570 PF07196 Flagellin hook IN motif NRL19_13580 PF00700 Bacterial flagellin C-terminal helical region NRL19_13580 PF07196 Flagellin hook IN motif NRL19_13580 PF00669 Bacterial flagellin N-terminal helical region NRL19_13600 PF01609 Transposase DDE domain NRL19_13605 PF03458 UPF0126 domain NRL19_13615 PF02926 THUMP domain NRL19_13615 PF02568 Thiamine biosynthesis protein (ThiI) NRL19_13625 PF00905 Penicillin binding protein transpeptidase domain NRL19_13625 PF06832 Penicillin-Binding Protein C-terminus Family NRL19_13625 PF00912 Transglycosylase NRL19_13630 PF00207 Alpha-2-macroglobulin family NRL19_13630 PF07703 Alpha-2-macroglobulin bait region domain NRL19_13630 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain NRL19_13630 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain NRL19_13630 PF11974 Bacterial alpha-2-macroglobulin MG3 domain NRL19_13630 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain NRL19_13630 PF17962 Bacterial macroglobulin domain 6 NRL19_13630 PF01835 MG2 domain NRL19_13630 PF07678 A-macroglobulin TED domain NRL19_13635 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRL19_13635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRL19_13640 PF00990 Diguanylate cyclase, GGDEF domain NRL19_13640 PF00563 EAL domain NRL19_13640 PF03707 Bacterial signalling protein N terminal repeat NRL19_13645 PF04055 Radical SAM superfamily NRL19_13655 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_13660 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_13665 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRL19_13670 PF00005 ABC transporter NRL19_13675 PF03956 Lysine exporter LysO NRL19_13680 PF01979 Amidohydrolase family NRL19_13685 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRL19_13695 PF04336 Acyl carrier protein phosphodiesterase NRL19_13710 PF03960 ArsC family NRL19_13715 PF00578 AhpC/TSA family NRL19_13720 PF01435 Peptidase family M48 NRL19_13720 PF13181 Tetratricopeptide repeat NRL19_13725 PF01206 Sulfurtransferase TusA NRL19_13730 PF01594 AI-2E family transporter NRL19_13740 PF00561 alpha/beta hydrolase fold NRL19_13745 PF03976 Polyphosphate kinase 2 (PPK2) NRL19_13750 PF08402 TOBE domain NRL19_13750 PF00005 ABC transporter NRL19_13755 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_13760 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_13760 PF14785 Maltose transport system permease protein MalF P2 domain NRL19_13765 PF01547 Bacterial extracellular solute-binding protein NRL19_13770 PF04245 37-kD nucleoid-associated bacterial protein NRL19_13775 PF07208 Protein of unknown function (DUF1414) NRL19_13780 PF00884 Sulfatase NRL19_13780 PF11893 Domain of unknown function (DUF3413) NRL19_13785 PF00593 TonB dependent receptor NRL19_13785 PF07715 TonB-dependent Receptor Plug Domain NRL19_13790 PF00326 Prolyl oligopeptidase family NRL19_13790 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NRL19_13810 PF03974 Ecotin NRL19_13815 PF04219 Protein of unknown function, DUF NRL19_13820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_13820 PF03466 LysR substrate binding domain NRL19_13825 PF01817 Chorismate mutase type II NRL19_13825 PF02153 Prephenate dehydrogenase NRL19_13830 PF00793 DAHP synthetase I family NRL19_13835 PF03009 Glycerophosphoryl diester phosphodiesterase family NRL19_13840 PF01266 FAD dependent oxidoreductase NRL19_13840 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NRL19_13845 PF08220 DeoR-like helix-turn-helix domain NRL19_13845 PF00455 DeoR C terminal sensor domain NRL19_13850 PF07690 Major Facilitator Superfamily NRL19_13855 PF12323 Helix-turn-helix domain NRL19_13865 PF00230 Major intrinsic protein NRL19_13870 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NRL19_13870 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NRL19_13875 PF03466 LysR substrate binding domain NRL19_13875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_13895 PF00248 Aldo/keto reductase family NRL19_13900 PF07690 Major Facilitator Superfamily NRL19_13910 PF02322 Cytochrome bd terminal oxidase subunit II NRL19_13915 PF01654 Cytochrome bd terminal oxidase subunit I NRL19_13920 PF00392 Bacterial regulatory proteins, gntR family NRL19_13920 PF00155 Aminotransferase class I and II NRL19_13930 PF04391 Protein of unknown function (DUF533) NRL19_13940 PF10689 Protein of unknown function (DUF2496) NRL19_13950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_13950 PF03466 LysR substrate binding domain NRL19_13960 PF07690 Major Facilitator Superfamily NRL19_13965 PF00849 RNA pseudouridylate synthase NRL19_13965 PF01479 S4 domain NRL19_13970 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NRL19_13970 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NRL19_13980 PF01385 Probable transposase NRL19_13980 PF12323 Helix-turn-helix domain NRL19_13980 PF07282 Putative transposase DNA-binding domain NRL19_14000 PF00271 Helicase conserved C-terminal domain NRL19_14000 PF04851 Type III restriction enzyme, res subunit NRL19_14005 PF00300 Histidine phosphatase superfamily (branch 1) NRL19_14010 PF00990 Diguanylate cyclase, GGDEF domain NRL19_14010 PF03707 Bacterial signalling protein N terminal repeat NRL19_14010 PF00563 EAL domain NRL19_14025 PF17810 Arginine decarboxylase helical bundle domain NRL19_14025 PF17944 Arginine decarboxylase C-terminal helical extension NRL19_14025 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NRL19_14030 PF01546 Peptidase family M20/M25/M40 NRL19_14030 PF07687 Peptidase dimerisation domain NRL19_14045 PF05221 S-adenosyl-L-homocysteine hydrolase NRL19_14045 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NRL19_14055 PF04264 YceI-like domain NRL19_14060 PF03466 LysR substrate binding domain NRL19_14060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_14070 PF01268 Formate--tetrahydrofolate ligase NRL19_14075 PF17200 Single Cache domain 2 NRL19_14075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_14075 PF00672 HAMP domain NRL19_14080 PF01227 GTP cyclohydrolase I NRL19_14085 PF00994 Probable molybdopterin binding domain NRL19_14085 PF03454 MoeA C-terminal region (domain IV) NRL19_14085 PF03453 MoeA N-terminal region (domain I and II) NRL19_14090 PF00899 ThiF family NRL19_14095 PF12697 Alpha/beta hydrolase family NRL19_14100 PF00005 ABC transporter NRL19_14100 PF03459 TOBE domain NRL19_14105 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_14115 PF02391 MoaE protein NRL19_14120 PF02597 ThiS family NRL19_14125 PF01967 MoaC family NRL19_14130 PF00994 Probable molybdopterin binding domain NRL19_14135 PF03264 NapC/NirT cytochrome c family, N-terminal region NRL19_14140 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) NRL19_14145 PF12801 4Fe-4S binding domain NRL19_14145 PF13237 4Fe-4S dicluster domain NRL19_14150 PF12838 4Fe-4S dicluster domain NRL19_14150 PF12800 4Fe-4S binding domain NRL19_14155 PF10518 TAT (twin-arginine translocation) pathway signal sequence NRL19_14155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRL19_14155 PF01568 Molydopterin dinucleotide binding domain NRL19_14155 PF00384 Molybdopterin oxidoreductase NRL19_14165 PF00037 4Fe-4S binding domain NRL19_14165 PF13187 4Fe-4S dicluster domain NRL19_14165 PF12800 4Fe-4S binding domain NRL19_14170 PF06463 Molybdenum Cofactor Synthesis C NRL19_14170 PF04055 Radical SAM superfamily NRL19_14175 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NRL19_14175 PF07730 Histidine kinase NRL19_14175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_14175 PF00672 HAMP domain NRL19_14180 PF00196 Bacterial regulatory proteins, luxR family NRL19_14180 PF00072 Response regulator receiver domain NRL19_14195 PF00072 Response regulator receiver domain NRL19_14195 PF09456 RcsC Alpha-Beta-Loop (ABL) NRL19_14195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_14195 PF00512 His Kinase A (phospho-acceptor) domain NRL19_14205 PF01933 Uncharacterised protein family UPF0052 NRL19_14215 PF13230 Glutamine amidotransferases class-II NRL19_14220 PF13580 SIS domain NRL19_14225 PF09317 Domain of unknown function (DUF1974) NRL19_14225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRL19_14225 PF02770 Acyl-CoA dehydrogenase, middle domain NRL19_14225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRL19_14240 PF00929 Exonuclease NRL19_14245 PF00075 RNase H NRL19_14250 PF08241 Methyltransferase domain NRL19_14255 PF16123 Hydroxyacylglutathione hydrolase C-terminus NRL19_14255 PF00753 Metallo-beta-lactamase superfamily NRL19_14265 PF01476 LysM domain NRL19_14265 PF01464 Transglycosylase SLT domain NRL19_14270 PF03372 Endonuclease/Exonuclease/phosphatase family NRL19_14280 PF03061 Thioesterase superfamily NRL19_14290 PF00356 Bacterial regulatory proteins, lacI family NRL19_14295 PF01464 Transglycosylase SLT domain NRL19_14295 PF14718 Soluble lytic murein transglycosylase L domain NRL19_14300 PF00990 Diguanylate cyclase, GGDEF domain NRL19_14300 PF00563 EAL domain NRL19_14300 PF03707 Bacterial signalling protein N terminal repeat NRL19_14305 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NRL19_14325 PF04357 TamB, inner membrane protein subunit of TAM complex NRL19_14330 PF17243 POTRA domain TamA domain 1 NRL19_14330 PF01103 Surface antigen NRL19_14330 PF07244 Surface antigen variable number repeat NRL19_14350 PF02627 Carboxymuconolactone decarboxylase family NRL19_14355 PF00403 Heavy-metal-associated domain NRL19_14355 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRL19_14355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRL19_14360 PF13416 Bacterial extracellular solute-binding protein NRL19_14370 PF00005 ABC transporter NRL19_14375 PF01066 CDP-alcohol phosphatidyltransferase NRL19_14380 PF13406 Transglycosylase SLT domain NRL19_14385 PF01047 MarR family NRL19_14395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NRL19_14395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NRL19_14395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NRL19_14395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NRL19_14400 PF17206 SeqA protein N-terminal domain NRL19_14400 PF03925 SeqA protein C-terminal domain NRL19_14405 PF12697 Alpha/beta hydrolase family NRL19_14415 PF01402 Ribbon-helix-helix protein, copG family NRL19_14420 PF00258 Flavodoxin NRL19_14430 PF01475 Ferric uptake regulator family NRL19_14435 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_14435 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_14435 PF01610 Transposase NRL19_14440 PF00749 tRNA synthetases class I (E and Q), catalytic domain NRL19_14440 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NRL19_14445 PF03173 Putative carbohydrate binding domain NRL19_14445 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain NRL19_14445 PF00728 Glycosyl hydrolase family 20, catalytic domain NRL19_14445 PF02838 Glycosyl hydrolase family 20, domain 2 NRL19_14450 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRL19_14450 PF00367 phosphotransferase system, EIIB NRL19_14450 PF02378 Phosphotransferase system, EIIC NRL19_14455 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NRL19_14460 PF01979 Amidohydrolase family NRL19_14465 PF01047 MarR family NRL19_14465 PF00480 ROK family NRL19_14470 PF08019 Phosphoethanolamine transferase EptA/EptB NRL19_14470 PF00884 Sulfatase NRL19_14475 PF01709 Transcriptional regulator NRL19_14480 PF00152 tRNA synthetases class II (D, K and N) NRL19_14480 PF01336 OB-fold nucleic acid binding domain NRL19_14480 PF02938 GAD domain NRL19_14485 PF01904 Protein of unknown function DUF72 NRL19_14490 PF13649 Methyltransferase domain NRL19_14495 PF08003 Protein of unknown function (DUF1698) NRL19_14515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_14515 PF03466 LysR substrate binding domain NRL19_14520 PF00877 NlpC/P60 family NRL19_14530 PF00171 Aldehyde dehydrogenase family NRL19_14535 PF00440 Bacterial regulatory proteins, tetR family NRL19_14535 PF08359 YsiA-like protein, C-terminal region NRL19_14545 PF00465 Iron-containing alcohol dehydrogenase NRL19_14550 PF00291 Pyridoxal-phosphate dependent enzyme NRL19_14570 PF01554 MatE NRL19_14580 PF04325 Protein of unknown function (DUF465) NRL19_14585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRL19_14585 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NRL19_14585 PF10371 Domain of unknown function NRL19_14585 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NRL19_14585 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NRL19_14590 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NRL19_14590 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRL19_14590 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NRL19_14595 PF00111 2Fe-2S iron-sulfur cluster binding domain NRL19_14595 PF03473 MOSC domain NRL19_14595 PF03476 MOSC N-terminal beta barrel domain NRL19_14595 PF00111 2Fe-2S iron-sulfur cluster binding domain NRL19_14595 PF03473 MOSC domain NRL19_14595 PF03476 MOSC N-terminal beta barrel domain NRL19_14600 PF01435 Peptidase family M48 NRL19_14610 PF12697 Alpha/beta hydrolase family NRL19_14610 PF08241 Methyltransferase domain NRL19_14615 PF00155 Aminotransferase class I and II NRL19_14620 PF06968 Biotin and Thiamin Synthesis associated domain NRL19_14620 PF04055 Radical SAM superfamily NRL19_14625 PF00202 Aminotransferase class-III NRL19_14640 PF01336 OB-fold nucleic acid binding domain NRL19_14640 PF00152 tRNA synthetases class II (D, K and N) NRL19_14645 PF03605 Anaerobic c4-dicarboxylate membrane transporter NRL19_14655 PF07687 Peptidase dimerisation domain NRL19_14655 PF01546 Peptidase family M20/M25/M40 NRL19_14660 PF03606 C4-dicarboxylate anaerobic carrier NRL19_14670 PF03960 ArsC family NRL19_14675 PF01546 Peptidase family M20/M25/M40 NRL19_14675 PF07687 Peptidase dimerisation domain NRL19_14680 PF02557 D-alanyl-D-alanine carboxypeptidase NRL19_14690 PF02080 TrkA-C domain NRL19_14690 PF00999 Sodium/hydrogen exchanger family NRL19_14690 PF03471 Transporter associated domain NRL19_14700 PF01810 LysE type translocator NRL19_14705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_14705 PF00672 HAMP domain NRL19_14710 PF07509 Protein of unknown function (DUF1523) NRL19_14725 PF01156 Inosine-uridine preferring nucleoside hydrolase NRL19_14730 PF00849 RNA pseudouridylate synthase NRL19_14735 PF01048 Phosphorylase superfamily NRL19_14740 PF00465 Iron-containing alcohol dehydrogenase NRL19_14745 PF04355 SmpA / OmlA family NRL19_14750 PF13460 NAD(P)H-binding NRL19_14755 PF03658 RnfH family Ubiquitin NRL19_14760 PF03364 Polyketide cyclase / dehydrase and lipid transport NRL19_14765 PF01668 SmpB protein NRL19_14775 PF07729 FCD domain NRL19_14775 PF00392 Bacterial regulatory proteins, gntR family NRL19_14780 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NRL19_14790 PF03480 Bacterial extracellular solute-binding protein, family 7 NRL19_14795 PF02614 Glucuronate isomerase NRL19_14800 PF01232 Mannitol dehydrogenase Rossmann domain NRL19_14800 PF08125 Mannitol dehydrogenase C-terminal domain NRL19_14805 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NRL19_14805 PF08666 SAF domain NRL19_14810 PF10688 Bacterial inner membrane protein NRL19_14815 PF00294 pfkB family carbohydrate kinase NRL19_14820 PF01081 KDPG and KHG aldolase NRL19_14835 PF13508 Acetyltransferase (GNAT) domain NRL19_14855 PF01546 Peptidase family M20/M25/M40 NRL19_14860 PF03466 LysR substrate binding domain NRL19_14860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_14865 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NRL19_14865 PF01243 Pyridoxamine 5'-phosphate oxidase NRL19_14880 PF01189 16S rRNA methyltransferase RsmB/F NRL19_14880 PF01029 NusB family NRL19_14885 PF00462 Glutaredoxin NRL19_14890 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NRL19_14890 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NRL19_14895 PF04333 MlaA lipoprotein NRL19_14905 PF03918 Cytochrome C biogenesis protein NRL19_14910 PF08534 Redoxin NRL19_14915 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NRL19_14915 PF01578 Cytochrome C assembly protein NRL19_14920 PF03100 CcmE NRL19_14925 PF04995 Heme exporter protein D (CcmD) NRL19_14930 PF01578 Cytochrome C assembly protein NRL19_14935 PF03379 CcmB protein NRL19_14940 PF00005 ABC transporter NRL19_14950 PF01584 CheW-like domain NRL19_14960 PF13614 AAA domain NRL19_14965 PF13677 Membrane MotB of proton-channel complex MotA/MotB NRL19_14965 PF00691 OmpA family NRL19_14970 PF01618 MotA/TolQ/ExbB proton channel family NRL19_14975 PF00072 Response regulator receiver domain NRL19_14975 PF01339 CheB methylesterase NRL19_14980 PF02895 Signal transducing histidine kinase, homodimeric domain NRL19_14980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_14980 PF01627 Hpt domain NRL19_14980 PF00072 Response regulator receiver domain NRL19_14980 PF01584 CheW-like domain NRL19_14985 PF04344 Chemotaxis phosphatase, CheZ NRL19_14990 PF00072 Response regulator receiver domain NRL19_14995 PF04542 Sigma-70 region 2 NRL19_14995 PF04539 Sigma-70 region 3 NRL19_14995 PF04545 Sigma-70, region 4 NRL19_15000 PF10609 NUBPL iron-transfer P-loop NTPase NRL19_15005 PF00448 SRP54-type protein, GTPase domain NRL19_15010 PF00771 FHIPEP family NRL19_15015 PF01312 FlhB HrpN YscU SpaS Family NRL19_15020 PF01311 Bacterial export proteins, family 1 NRL19_15025 PF01313 Bacterial export proteins, family 3 NRL19_15030 PF00813 FliP family NRL19_15035 PF04347 Flagellar biosynthesis protein, FliO NRL19_15040 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NRL19_15045 PF02154 Flagellar motor switch protein FliM NRL19_15045 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NRL19_15065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRL19_15065 PF18269 T3SS EscN ATPase C-terminal domain NRL19_15075 PF01706 FliG C-terminal domain NRL19_15075 PF14841 FliG middle domain NRL19_15075 PF14842 FliG N-terminal domain NRL19_15080 PF01514 Secretory protein of YscJ/FliF family NRL19_15080 PF08345 Flagellar M-ring protein C-terminal NRL19_15085 PF02049 Flagellar hook-basal body complex protein FliE NRL19_15090 PF13006 Insertion element 4 transposase N-terminal NRL19_15090 PF01609 Transposase DDE domain NRL19_15100 PF03960 ArsC family NRL19_15105 PF01758 Sodium Bile acid symporter family NRL19_15110 PF01022 Bacterial regulatory protein, arsR family NRL19_15115 PF00072 Response regulator receiver domain NRL19_15155 PF01609 Transposase DDE domain NRL19_15175 PF00892 EamA-like transporter family NRL19_15180 PF00884 Sulfatase NRL19_15180 PF08019 Phosphoethanolamine transferase EptA/EptB NRL19_15190 PF01609 Transposase DDE domain NRL19_15210 PF01609 Transposase DDE domain NRL19_15225 PF01219 Prokaryotic diacylglycerol kinase NRL19_15230 PF09722 Protein of unknown function (DUF2384) NRL19_15260 PF13808 DDE_Tnp_1-associated NRL19_15260 PF01609 Transposase DDE domain NRL19_15270 PF01609 Transposase DDE domain NRL19_15270 PF05598 Transposase domain (DUF772) NRL19_15275 PF13426 PAS domain NRL19_15275 PF08448 PAS fold NRL19_15275 PF05231 MASE1 NRL19_15275 PF00990 Diguanylate cyclase, GGDEF domain NRL19_15275 PF00563 EAL domain NRL19_15275 PF08447 PAS fold NRL19_15280 PF05598 Transposase domain (DUF772) NRL19_15280 PF01609 Transposase DDE domain NRL19_15285 PF04055 Radical SAM superfamily NRL19_15285 PF18693 TRAM domain NRL19_15285 PF00919 Uncharacterized protein family UPF0004 NRL19_15290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRL19_15295 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_15300 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_15300 PF12911 N-terminal TM domain of oligopeptide transport permease C NRL19_15305 PF00005 ABC transporter NRL19_15305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRL19_15310 PF00005 ABC transporter NRL19_15310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRL19_15320 PF01869 BadF/BadG/BcrA/BcrD ATPase family NRL19_15325 PF02838 Glycosyl hydrolase family 20, domain 2 NRL19_15325 PF00728 Glycosyl hydrolase family 20, catalytic domain NRL19_15330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_15330 PF08447 PAS fold NRL19_15345 PF08272 Topoisomerase I zinc-ribbon-like NRL19_15345 PF01131 DNA topoisomerase NRL19_15345 PF01751 Toprim domain NRL19_15345 PF01396 Topoisomerase DNA binding C4 zinc finger NRL19_15350 PF04996 Succinylarginine dihydrolase NRL19_15355 PF08496 Peptidase family S49 N-terminal NRL19_15355 PF01343 Peptidase family S49 NRL19_15360 PF00106 short chain dehydrogenase NRL19_15370 PF07690 Major Facilitator Superfamily NRL19_15375 PF00155 Aminotransferase class I and II NRL19_15385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_15385 PF03466 LysR substrate binding domain NRL19_15390 PF00709 Adenylosuccinate synthetase NRL19_15395 PF01161 Phosphatidylethanolamine-binding protein NRL19_15405 PF01204 Trehalase NRL19_15410 PF00579 tRNA synthetases class I (W and Y) NRL19_15415 PF01551 Peptidase family M23 NRL19_15415 PF01476 LysM domain NRL19_15415 PF08525 Opacity-associated protein A N-terminal motif NRL19_15420 PF03702 Anhydro-N-acetylmuramic acid kinase NRL19_15435 PF01042 Endoribonuclease L-PSP NRL19_15450 PF00456 Transketolase, thiamine diphosphate binding domain NRL19_15450 PF02779 Transketolase, pyrimidine binding domain NRL19_15450 PF02780 Transketolase, C-terminal domain NRL19_15455 PF02772 S-adenosylmethionine synthetase, central domain NRL19_15455 PF00438 S-adenosylmethionine synthetase, N-terminal domain NRL19_15455 PF02773 S-adenosylmethionine synthetase, C-terminal domain NRL19_15460 PF10263 SprT-like family NRL19_15460 PF17283 SprT-like zinc ribbon domain NRL19_15465 PF04231 Endonuclease I NRL19_15470 PF04452 RNA methyltransferase NRL19_15475 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NRL19_15475 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NRL19_15480 PF02622 Uncharacterized ACR, COG1678 NRL19_15485 PF03652 Holliday junction resolvase NRL19_15490 PF03466 LysR substrate binding domain NRL19_15490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_15495 PF07690 Major Facilitator Superfamily NRL19_15500 PF00144 Beta-lactamase NRL19_15505 PF01235 Sodium:alanine symporter family NRL19_15510 PF00923 Transaldolase/Fructose-6-phosphate aldolase NRL19_15525 PF03167 Uracil DNA glycosylase superfamily NRL19_15530 PF01228 Glycine radical NRL19_15535 PF00375 Sodium:dicarboxylate symporter family NRL19_15540 PF00793 DAHP synthetase I family NRL19_15545 PF13369 Transglutaminase-like superfamily NRL19_15555 PF17827 PrmC N-terminal domain NRL19_15555 PF13847 Methyltransferase domain NRL19_15560 PF03462 PCRF domain NRL19_15560 PF00472 RF-1 domain NRL19_15565 PF01488 Shikimate / quinate 5-dehydrogenase NRL19_15565 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NRL19_15565 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NRL19_15570 PF03550 Outer membrane lipoprotein LolB NRL19_15575 PF08544 GHMP kinases C terminal NRL19_15575 PF00288 GHMP kinases N terminal domain NRL19_15585 PF14572 Phosphoribosyl synthetase-associated domain NRL19_15585 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NRL19_15590 PF01195 Peptidyl-tRNA hydrolase NRL19_15595 PF06071 Protein of unknown function (DUF933) NRL19_15595 PF01926 50S ribosome-binding GTPase NRL19_15600 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_15600 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_15600 PF01610 Transposase NRL19_15640 PF03600 Citrate transporter NRL19_15640 PF02080 TrkA-C domain NRL19_15645 PF04266 ASCH domain NRL19_15650 PF07859 alpha/beta hydrolase fold NRL19_15660 PF07690 Major Facilitator Superfamily NRL19_15665 PF13419 Haloacid dehalogenase-like hydrolase NRL19_15695 PF01609 Transposase DDE domain NRL19_15720 PF00171 Aldehyde dehydrogenase family NRL19_15725 PF04958 Arginine N-succinyltransferase beta subunit NRL19_15730 PF00202 Aminotransferase class-III NRL19_15735 PF00117 Glutamine amidotransferase class-I NRL19_15745 PF00579 tRNA synthetases class I (W and Y) NRL19_15750 PF13419 Haloacid dehalogenase-like hydrolase NRL19_15755 PF00834 Ribulose-phosphate 3 epimerase family NRL19_15760 PF02086 D12 class N6 adenine-specific DNA methyltransferase NRL19_15765 PF05036 Sporulation related domain NRL19_15770 PF01761 3-dehydroquinate synthase NRL19_15775 PF01202 Shikimate kinase NRL19_15780 PF03958 Bacterial type II/III secretion system short domain NRL19_15780 PF07660 Secretin and TonB N terminus short domain NRL19_15780 PF00263 Bacterial type II and III secretion system protein NRL19_15780 PF11741 AMIN domain NRL19_15790 PF04350 Pilus assembly protein, PilO NRL19_15800 PF11104 Type IV pilus assembly protein PilM; NRL19_15805 PF17092 Penicillin-binding protein OB-like domain NRL19_15805 PF00905 Penicillin binding protein transpeptidase domain NRL19_15805 PF00912 Transglycosylase NRL19_15810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_15810 PF03466 LysR substrate binding domain NRL19_15820 PF01609 Transposase DDE domain NRL19_15820 PF13006 Insertion element 4 transposase N-terminal NRL19_15830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_15830 PF03466 LysR substrate binding domain NRL19_15845 PF01476 LysM domain NRL19_15845 PF01551 Peptidase family M23 NRL19_15845 PF08525 Opacity-associated protein A N-terminal motif NRL19_15855 PF00924 Mechanosensitive ion channel NRL19_15855 PF12795 Mechanosensitive ion channel porin domain NRL19_15855 PF12794 Mechanosensitive ion channel inner membrane domain 1 NRL19_15860 PF03009 Glycerophosphoryl diester phosphodiesterase family NRL19_15865 PF02743 Cache domain NRL19_15865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_15865 PF00672 HAMP domain NRL19_15870 PF00890 FAD binding domain NRL19_15870 PF02910 Fumarate reductase flavoprotein C-term NRL19_15875 PF13085 2Fe-2S iron-sulfur cluster binding domain NRL19_15875 PF13183 4Fe-4S dicluster domain NRL19_15880 PF02300 Fumarate reductase subunit C NRL19_15885 PF02313 Fumarate reductase subunit D NRL19_15900 PF06224 Winged helix DNA-binding domain NRL19_15905 PF13847 Methyltransferase domain NRL19_15915 PF00501 AMP-binding enzyme NRL19_15925 PF00106 short chain dehydrogenase NRL19_15935 PF00072 Response regulator receiver domain NRL19_15935 PF00486 Transcriptional regulatory protein, C terminal NRL19_15940 PF08521 Two-component sensor kinase N-terminal NRL19_15940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_15940 PF00512 His Kinase A (phospho-acceptor) domain NRL19_15945 PF08443 RimK-like ATP-grasp domain NRL19_15945 PF18030 RimK PreATP-grasp domain NRL19_15950 PF00478 IMP dehydrogenase / GMP reductase domain NRL19_15960 PF01132 Elongation factor P (EF-P) OB domain NRL19_15960 PF09285 Elongation factor P, C-terminal NRL19_15960 PF08207 Elongation factor P (EF-P) KOW-like domain NRL19_15965 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_15970 PF00005 ABC transporter NRL19_15970 PF09383 NIL domain NRL19_15975 PF03180 NLPA lipoprotein NRL19_15980 PF03171 2OG-Fe(II) oxygenase superfamily NRL19_15980 PF14226 non-haem dioxygenase in morphine synthesis N-terminal NRL19_15990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRL19_15990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRL19_16000 PF17152 Periplasmic sensor domain NRL19_16000 PF00990 Diguanylate cyclase, GGDEF domain NRL19_16010 PF00990 Diguanylate cyclase, GGDEF domain NRL19_16015 PF13419 Haloacid dehalogenase-like hydrolase NRL19_16025 PF03466 LysR substrate binding domain NRL19_16025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_16030 PF00313 'Cold-shock' DNA-binding domain NRL19_16035 PF00857 Isochorismatase family NRL19_16040 PF01494 FAD binding domain NRL19_16045 PF04055 Radical SAM superfamily NRL19_16045 PF01938 TRAM domain NRL19_16045 PF00919 Uncharacterized protein family UPF0004 NRL19_16050 PF02562 PhoH-like protein NRL19_16055 PF02130 Uncharacterized protein family UPF0054 NRL19_16060 PF03471 Transporter associated domain NRL19_16060 PF00571 CBS domain NRL19_16065 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_16065 PF01610 Transposase NRL19_16065 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_16070 PF00795 Carbon-nitrogen hydrolase NRL19_16075 PF07295 Zinc-ribbon containing domain NRL19_16080 PF00133 tRNA synthetases class I (I, L, M and V) NRL19_16080 PF13603 Leucyl-tRNA synthetase, Domain 2 NRL19_16080 PF08264 Anticodon-binding domain of tRNA NRL19_16100 PF01467 Cytidylyltransferase-like NRL19_16110 PF02590 Predicted SPOUT methyltransferase NRL19_16115 PF00905 Penicillin binding protein transpeptidase domain NRL19_16115 PF03717 Penicillin-binding Protein dimerisation domain NRL19_16120 PF01098 Cell cycle protein NRL19_16125 PF13406 Transglycosylase SLT domain NRL19_16130 PF05036 Sporulation related domain NRL19_16130 PF03330 Lytic transglycolase NRL19_16135 PF07943 Penicillin-binding protein 5, C-terminal domain NRL19_16135 PF00768 D-alanyl-D-alanine carboxypeptidase NRL19_16140 PF04359 Protein of unknown function (DUF493) NRL19_16145 PF03099 Biotin/lipoate A/B protein ligase family NRL19_16150 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NRL19_16150 PF04055 Radical SAM superfamily NRL19_16160 PF02508 Rnf-Nqr subunit, membrane protein NRL19_16175 PF13411 MerR HTH family regulatory protein NRL19_16180 PF01368 DHH family NRL19_16180 PF02272 DHHA1 domain NRL19_16180 PF17768 RecJ OB domain NRL19_16190 PF01741 Large-conductance mechanosensitive channel, MscL NRL19_16195 PF02899 Phage integrase, N-terminal SAM-like domain NRL19_16195 PF00589 Phage integrase family NRL19_16200 PF00258 Flavodoxin NRL19_16205 PF01523 Putative modulator of DNA gyrase NRL19_16215 PF01523 Putative modulator of DNA gyrase NRL19_16230 PF17969 L,D-transpeptidase C-terminal domain NRL19_16230 PF03734 L,D-transpeptidase catalytic domain NRL19_16235 PF01136 Peptidase family U32 NRL19_16235 PF16325 Peptidase family U32 C-terminal domain NRL19_16240 PF12838 4Fe-4S dicluster domain NRL19_16245 PF06476 Protein of unknown function (DUF1090) NRL19_16250 PF02635 DsrE/DsrF-like family NRL19_16255 PF07690 Major Facilitator Superfamily NRL19_16260 PF00575 S1 RNA binding domain NRL19_16260 PF00013 KH domain NRL19_16260 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NRL19_16260 PF01138 3' exoribonuclease family, domain 1 NRL19_16260 PF03725 3' exoribonuclease family, domain 2 NRL19_16265 PF00312 Ribosomal protein S15 NRL19_16270 PF16198 tRNA pseudouridylate synthase B C-terminal domain NRL19_16270 PF01509 TruB family pseudouridylate synthase (N terminal domain) NRL19_16270 PF09157 Pseudouridine synthase II TruB, C-terminal NRL19_16275 PF02033 Ribosome-binding factor A NRL19_16280 PF00009 Elongation factor Tu GTP binding domain NRL19_16280 PF11987 Translation-initiation factor 2 NRL19_16280 PF08364 Bacterial translation initiation factor IF-2 associated region NRL19_16280 PF04760 Translation initiation factor IF-2, N-terminal region NRL19_16285 PF13184 NusA-like KH domain NRL19_16285 PF08529 NusA N-terminal domain NRL19_16285 PF00575 S1 RNA binding domain NRL19_16290 PF02576 RimP N-terminal domain NRL19_16290 PF17384 RimP C-terminal SH3 domain NRL19_16305 PF03840 Preprotein translocase SecG subunit NRL19_16310 PF00121 Triosephosphate isomerase NRL19_16315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NRL19_16315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NRL19_16315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NRL19_16315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NRL19_16320 PF00809 Pterin binding enzyme NRL19_16325 PF00004 ATPase family associated with various cellular activities (AAA) NRL19_16325 PF17862 AAA+ lid domain NRL19_16325 PF06480 FtsH Extracellular NRL19_16325 PF01434 Peptidase family M41 NRL19_16330 PF01728 FtsJ-like methyltransferase NRL19_16335 PF01985 CRS1 / YhbY (CRM) domain NRL19_16345 PF01272 Transcription elongation factor, GreA/GreB, C-term NRL19_16345 PF03449 Transcription elongation factor, N-terminal NRL19_16350 PF13677 Membrane MotB of proton-channel complex MotA/MotB NRL19_16350 PF00691 OmpA family NRL19_16360 PF02609 Exonuclease VII small subunit NRL19_16365 PF00348 Polyprenyl synthetase NRL19_16370 PF02780 Transketolase, C-terminal domain NRL19_16370 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NRL19_16370 PF02779 Transketolase, pyrimidine binding domain NRL19_16375 PF12911 N-terminal TM domain of oligopeptide transport permease C NRL19_16375 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_16380 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_16385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRL19_16390 PF00005 ABC transporter NRL19_16390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRL19_16395 PF04608 Phosphatidylglycerophosphatase A NRL19_16400 PF00586 AIR synthase related protein, N-terminal domain NRL19_16400 PF02769 AIR synthase related protein, C-terminal domain NRL19_16405 PF01029 NusB family NRL19_16410 PF00885 6,7-dimethyl-8-ribityllumazine synthase NRL19_16415 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NRL19_16415 PF00925 GTP cyclohydrolase II NRL19_16420 PF00677 Lumazine binding domain NRL19_16425 PF01872 RibD C-terminal domain NRL19_16425 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NRL19_16430 PF03477 ATP cone domain NRL19_16440 PF00464 Serine hydroxymethyltransferase NRL19_16450 PF02613 Nitrate reductase delta subunit NRL19_16460 PF00563 EAL domain NRL19_16460 PF00990 Diguanylate cyclase, GGDEF domain NRL19_16460 PF03707 Bacterial signalling protein N terminal repeat NRL19_16465 PF16177 Acetyl-coenzyme A synthetase N-terminus NRL19_16465 PF00501 AMP-binding enzyme NRL19_16465 PF13193 AMP-binding enzyme C-terminal domain NRL19_16470 PF01220 Dehydroquinase class II NRL19_16475 PF00364 Biotin-requiring enzyme NRL19_16480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NRL19_16480 PF00289 Biotin carboxylase, N-terminal domain NRL19_16480 PF02785 Biotin carboxylase C-terminal domain NRL19_16485 PF06196 Protein of unknown function (DUF997) NRL19_16490 PF00474 Sodium:solute symporter family NRL19_16495 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRL19_16495 PF02378 Phosphotransferase system, EIIC NRL19_16495 PF00367 phosphotransferase system, EIIB NRL19_16500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_16500 PF03466 LysR substrate binding domain NRL19_16505 PF08240 Alcohol dehydrogenase GroES-like domain NRL19_16505 PF00107 Zinc-binding dehydrogenase NRL19_16515 PF12464 Maltose acetyltransferase NRL19_16515 PF00132 Bacterial transferase hexapeptide (six repeats) NRL19_16530 PF00881 Nitroreductase family NRL19_16535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRL19_16535 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRL19_16540 PF01343 Peptidase family S49 NRL19_16555 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NRL19_16555 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NRL19_16560 PF07023 Protein of unknown function (DUF1315) NRL19_16565 PF00710 Asparaginase, N-terminal NRL19_16565 PF17763 Glutaminase/Asparaginase C-terminal domain NRL19_16570 PF03616 Sodium/glutamate symporter NRL19_16575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_16575 PF02743 Cache domain NRL19_16575 PF00672 HAMP domain NRL19_16585 PF00152 tRNA synthetases class II (D, K and N) NRL19_16585 PF01336 OB-fold nucleic acid binding domain NRL19_16590 PF02567 Phenazine biosynthesis-like protein NRL19_16595 PF00175 Oxidoreductase NAD-binding domain NRL19_16595 PF00258 Flavodoxin NRL19_16595 PF00667 FAD binding domain NRL19_16600 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NRL19_16600 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NRL19_16605 PF01507 Phosphoadenosine phosphosulfate reductase family NRL19_16610 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NRL19_16615 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_16620 PF00005 ABC transporter NRL19_16620 PF00571 CBS domain NRL19_16625 PF00186 Dihydrofolate reductase NRL19_16630 PF12821 Threonine/Serine exporter, ThrE NRL19_16635 PF06738 Putative threonine/serine exporter NRL19_16645 PF00994 Probable molybdopterin binding domain NRL19_16660 PF00194 Eukaryotic-type carbonic anhydrase NRL19_16665 PF04227 Indigoidine synthase A like protein NRL19_16670 PF00294 pfkB family carbohydrate kinase NRL19_16675 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NRL19_16675 PF04324 BFD-like [2Fe-2S] binding domain NRL19_16675 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NRL19_16675 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRL19_16675 PF13806 Rieske-like [2Fe-2S] domain NRL19_16675 PF18267 Rubredoxin NAD+ reductase C-terminal domain NRL19_16680 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NRL19_16680 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRL19_16680 PF13806 Rieske-like [2Fe-2S] domain NRL19_16680 PF18267 Rubredoxin NAD+ reductase C-terminal domain NRL19_16680 PF04324 BFD-like [2Fe-2S] binding domain NRL19_16680 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NRL19_16685 PF00005 ABC transporter NRL19_16690 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_16695 PF00005 ABC transporter NRL19_16705 PF10414 Sirohaem synthase dimerisation region NRL19_16705 PF14824 Sirohaem biosynthesis protein central NRL19_16705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NRL19_16710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRL19_16710 PF00384 Molybdopterin oxidoreductase NRL19_16710 PF04324 BFD-like [2Fe-2S] binding domain NRL19_16710 PF01568 Molydopterin dinucleotide binding domain NRL19_16725 PF00582 Universal stress protein family NRL19_16735 PF00171 Aldehyde dehydrogenase family NRL19_16740 PF00696 Amino acid kinase family NRL19_16740 PF01472 PUA domain NRL19_16745 PF07417 Sigma factor-binding transcriptional regulator Crl NRL19_16750 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) NRL19_16755 PF00156 Phosphoribosyl transferase domain NRL19_16760 PF07687 Peptidase dimerisation domain NRL19_16760 PF01546 Peptidase family M20/M25/M40 NRL19_16765 PF00005 ABC transporter NRL19_16765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRL19_16770 PF00005 ABC transporter NRL19_16770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRL19_16775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRL19_16780 PF12911 N-terminal TM domain of oligopeptide transport permease C NRL19_16780 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_16785 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_16790 PF00593 TonB dependent receptor NRL19_16790 PF07715 TonB-dependent Receptor Plug Domain NRL19_16800 PF01618 MotA/TolQ/ExbB proton channel family NRL19_16805 PF01618 MotA/TolQ/ExbB proton channel family NRL19_16810 PF02472 Biopolymer transport protein ExbD/TolR NRL19_16825 PF06483 Chitinase C NRL19_16825 PF00704 Glycosyl hydrolases family 18 NRL19_16860 PF00749 tRNA synthetases class I (E and Q), catalytic domain NRL19_16865 PF00749 tRNA synthetases class I (E and Q), catalytic domain NRL19_16870 PF00749 tRNA synthetases class I (E and Q), catalytic domain NRL19_16875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_16875 PF00672 HAMP domain NRL19_16885 PF00313 'Cold-shock' DNA-binding domain NRL19_16925 PF00929 Exonuclease NRL19_16930 PF03193 RsgA GTPase NRL19_16935 PF02666 Phosphatidylserine decarboxylase NRL19_16940 PF09905 DNA-binding protein VF530 NRL19_16970 PF06877 Regulator of ribonuclease activity B NRL19_16990 PF00561 alpha/beta hydrolase fold NRL19_16995 PF00664 ABC transporter transmembrane region NRL19_16995 PF00005 ABC transporter NRL19_17000 PF06004 Bacterial protein of unknown function (DUF903) NRL19_17005 PF00581 Rhodanese-like domain NRL19_17010 PF04960 Glutaminase NRL19_17015 PF04320 Protein with unknown function (DUF469) NRL19_17020 PF02390 Putative methyltransferase NRL19_17025 PF01483 Proprotein convertase P-domain NRL19_17025 PF04389 Peptidase family M28 NRL19_17030 PF00155 Aminotransferase class I and II NRL19_17035 PF12792 CSS motif domain associated with EAL NRL19_17035 PF00563 EAL domain NRL19_17040 PF08338 Domain of unknown function (DUF1731) NRL19_17040 PF01370 NAD dependent epimerase/dehydratase family NRL19_17050 PF00005 ABC transporter NRL19_17055 PF13472 GDSL-like Lipase/Acylhydrolase family NRL19_17060 PF01584 CheW-like domain NRL19_17060 PF00072 Response regulator receiver domain NRL19_17065 PF00267 Gram-negative porin NRL19_17070 PF00478 IMP dehydrogenase / GMP reductase domain NRL19_17070 PF00571 CBS domain NRL19_17075 PF00005 ABC transporter NRL19_17075 PF12848 ABC transporter NRL19_17085 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NRL19_17090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_17090 PF03466 LysR substrate binding domain NRL19_17095 PF02525 Flavodoxin-like fold NRL19_17110 PF01609 Transposase DDE domain NRL19_17110 PF05598 Transposase domain (DUF772) NRL19_17115 PF13411 MerR HTH family regulatory protein NRL19_17125 PF00474 Sodium:solute symporter family NRL19_17130 PF03734 L,D-transpeptidase catalytic domain NRL19_17130 PF17969 L,D-transpeptidase C-terminal domain NRL19_17135 PF00924 Mechanosensitive ion channel NRL19_17140 PF00871 Acetokinase family NRL19_17145 PF04074 YhcH/YjgK/YiaL NRL19_17155 PF13302 Acetyltransferase (GNAT) domain NRL19_17160 PF13302 Acetyltransferase (GNAT) domain NRL19_17165 PF02868 Thermolysin metallopeptidase, alpha-helical domain NRL19_17165 PF04151 Bacterial pre-peptidase C-terminal domain NRL19_17165 PF03413 Peptidase propeptide and YPEB domain NRL19_17165 PF07504 Fungalysin/Thermolysin Propeptide Motif NRL19_17165 PF01447 Thermolysin metallopeptidase, catalytic domain NRL19_17170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_17170 PF03466 LysR substrate binding domain NRL19_17175 PF07690 Major Facilitator Superfamily NRL19_17195 PF06826 Predicted Permease Membrane Region NRL19_17195 PF02080 TrkA-C domain NRL19_17200 PF03006 Haemolysin-III related NRL19_17205 PF00282 Pyridoxal-dependent decarboxylase conserved domain NRL19_17210 PF04279 Intracellular septation protein A NRL19_17215 PF03795 YCII-related domain NRL19_17220 PF01609 Transposase DDE domain NRL19_17220 PF13006 Insertion element 4 transposase N-terminal NRL19_17225 PF00459 Inositol monophosphatase family NRL19_17235 PF00483 Nucleotidyl transferase NRL19_17240 PF00854 POT family NRL19_17245 PF00072 Response regulator receiver domain NRL19_17280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRL19_17290 PF01207 Dihydrouridine synthase (Dus) NRL19_17295 PF02954 Bacterial regulatory protein, Fis family NRL19_17300 PF01810 LysE type translocator NRL19_17325 PF03060 Nitronate monooxygenase NRL19_17330 PF00445 Ribonuclease T2 family NRL19_17350 PF00672 HAMP domain NRL19_17350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_17350 PF00512 His Kinase A (phospho-acceptor) domain NRL19_17350 PF16527 Two-component sensor protein CpxA, periplasmic domain NRL19_17355 PF00072 Response regulator receiver domain NRL19_17355 PF00486 Transcriptional regulatory protein, C terminal NRL19_17360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRL19_17365 PF00005 ABC transporter NRL19_17365 PF12704 MacB-like periplasmic core domain NRL19_17365 PF02687 FtsX-like permease family NRL19_17375 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase NRL19_17395 PF03783 Curli production assembly/transport component CsgG NRL19_17405 PF05643 Putative bacterial lipoprotein (DUF799) NRL19_17410 PF00990 Diguanylate cyclase, GGDEF domain NRL19_17415 PF00270 DEAD/DEAH box helicase NRL19_17415 PF00271 Helicase conserved C-terminal domain NRL19_17420 PF00970 Oxidoreductase FAD-binding domain NRL19_17420 PF00111 2Fe-2S iron-sulfur cluster binding domain NRL19_17420 PF00175 Oxidoreductase NAD-binding domain NRL19_17440 PF00753 Metallo-beta-lactamase superfamily NRL19_17445 PF01609 Transposase DDE domain NRL19_17450 PF05598 Transposase domain (DUF772) NRL19_17450 PF01609 Transposase DDE domain NRL19_17490 PF01425 Amidase NRL19_17495 PF04371 Porphyromonas-type peptidyl-arginine deiminase NRL19_17500 PF03466 LysR substrate binding domain NRL19_17500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_17510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRL19_17515 PF00583 Acetyltransferase (GNAT) family NRL19_17520 PF01758 Sodium Bile acid symporter family NRL19_17530 PF03144 Elongation factor Tu domain 2 NRL19_17530 PF00009 Elongation factor Tu GTP binding domain NRL19_17530 PF16658 Class II release factor RF3, C-terminal domain NRL19_17535 PF00072 Response regulator receiver domain NRL19_17535 PF00990 Diguanylate cyclase, GGDEF domain NRL19_17540 PF00563 EAL domain NRL19_17540 PF00990 Diguanylate cyclase, GGDEF domain NRL19_17540 PF08448 PAS fold NRL19_17545 PF05762 VWA domain containing CoxE-like protein NRL19_17550 PF07728 AAA domain (dynein-related subfamily) NRL19_17550 PF17868 AAA lid domain NRL19_17550 PF12592 Protein of unknown function (DUF3763) NRL19_17560 PF01609 Transposase DDE domain NRL19_17560 PF13808 DDE_Tnp_1-associated NRL19_17565 PF00583 Acetyltransferase (GNAT) family NRL19_17575 PF00501 AMP-binding enzyme NRL19_17585 PF01177 Asp/Glu/Hydantoin racemase NRL19_17600 PF00392 Bacterial regulatory proteins, gntR family NRL19_17600 PF00155 Aminotransferase class I and II NRL19_17615 PF00209 Sodium:neurotransmitter symporter family NRL19_17620 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_17620 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_17620 PF01610 Transposase NRL19_17625 PF00209 Sodium:neurotransmitter symporter family NRL19_17645 PF07690 Major Facilitator Superfamily NRL19_17655 PF01037 Lrp/AsnC ligand binding domain NRL19_17670 PF01047 MarR family NRL19_17675 PF16884 N-terminal domain of oxidoreductase NRL19_17675 PF00107 Zinc-binding dehydrogenase NRL19_17680 PF00293 NUDIX domain NRL19_17695 PF01641 SelR domain NRL19_17700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRL19_17700 PF00128 Alpha amylase, catalytic domain NRL19_17705 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRL19_17705 PF02806 Alpha amylase, C-terminal all-beta domain NRL19_17705 PF00128 Alpha amylase, catalytic domain NRL19_17710 PF02446 4-alpha-glucanotransferase NRL19_17715 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NRL19_17715 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NRL19_17720 PF01263 Aldose 1-epimerase NRL19_17725 PF02445 Quinolinate synthetase A protein NRL19_17730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_17730 PF00672 HAMP domain NRL19_17775 PF13174 Tetratricopeptide repeat NRL19_17775 PF16331 TolA binding protein trimerisation NRL19_17780 PF00691 OmpA family NRL19_17785 PF07676 WD40-like Beta Propeller Repeat NRL19_17785 PF04052 TolB amino-terminal domain NRL19_17795 PF02472 Biopolymer transport protein ExbD/TolR NRL19_17800 PF01618 MotA/TolQ/ExbB proton channel family NRL19_17805 PF03061 Thioesterase superfamily NRL19_17810 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) NRL19_17815 PF08173 Membrane bound YbgT-like protein NRL19_17820 PF02322 Cytochrome bd terminal oxidase subunit II NRL19_17825 PF01654 Cytochrome bd terminal oxidase subunit I NRL19_17835 PF05496 Holliday junction DNA helicase RuvB P-loop domain NRL19_17835 PF05491 RuvB C-terminal winged helix domain NRL19_17835 PF17864 RuvB AAA lid domain NRL19_17840 PF01330 RuvA N terminal domain NRL19_17840 PF07499 RuvA, C-terminal domain NRL19_17845 PF00672 HAMP domain NRL19_17845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_17845 PF12729 Four helix bundle sensory module for signal transduction NRL19_17850 PF03129 Anticodon binding domain NRL19_17850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NRL19_17850 PF04073 Aminoacyl-tRNA editing domain NRL19_17855 PF00929 Exonuclease NRL19_17860 PF00106 short chain dehydrogenase NRL19_17875 PF00378 Enoyl-CoA hydratase/isomerase NRL19_17880 PF10952 Protein of unknown function (DUF2753) NRL19_17885 PF00132 Bacterial transferase hexapeptide (six repeats) NRL19_17895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRL19_17905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_17905 PF08447 PAS fold NRL19_17910 PF00270 DEAD/DEAH box helicase NRL19_17910 PF00271 Helicase conserved C-terminal domain NRL19_17915 PF08534 Redoxin NRL19_17920 PF00403 Heavy-metal-associated domain NRL19_17925 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRL19_17925 PF11852 Domain of unknown function (DUF3372) NRL19_17925 PF03714 Bacterial pullanase-associated domain NRL19_17925 PF18494 Pullulanase Ins domain NRL19_17925 PF17967 Pullulanase N2 domain NRL19_17940 PF02583 Metal-sensitive transcriptional repressor NRL19_17945 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) NRL19_17950 PF01270 Glycosyl hydrolases family 8 NRL19_17955 PF03170 Bacterial cellulose synthase subunit NRL19_17960 PF00535 Glycosyl transferase family 2 NRL19_17960 PF07238 PilZ domain NRL19_17965 PF03552 Cellulose synthase NRL19_17965 PF00535 Glycosyl transferase family 2 NRL19_17965 PF07238 PilZ domain NRL19_17970 PF06564 Cellulose biosynthesis protein BcsQ NRL19_17980 PF11658 Cellulose biosynthesis protein BcsG NRL19_17990 PF00155 Aminotransferase class I and II NRL19_17995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_17995 PF03466 LysR substrate binding domain NRL19_18005 PF04055 Radical SAM superfamily NRL19_18010 PF11230 Protein of unknown function (DUF3029) NRL19_18025 PF00111 2Fe-2S iron-sulfur cluster binding domain NRL19_18025 PF00970 Oxidoreductase FAD-binding domain NRL19_18025 PF00175 Oxidoreductase NAD-binding domain NRL19_18040 PF00672 HAMP domain NRL19_18040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_18040 PF17200 Single Cache domain 2 NRL19_18045 PF18416 N-acetylglucosamine binding protein domain 2 NRL19_18045 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NRL19_18050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_18050 PF03466 LysR substrate binding domain NRL19_18055 PF00005 ABC transporter NRL19_18055 PF12857 TOBE-like domain NRL19_18060 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_18065 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_18110 PF18337 RapA N-terminal Tudor like domain NRL19_18110 PF18339 RapA N-terminal Tudor like domain 1 NRL19_18110 PF00271 Helicase conserved C-terminal domain NRL19_18110 PF00176 SNF2 family N-terminal domain NRL19_18110 PF12137 RNA polymerase recycling family C-terminal NRL19_18115 PF00849 RNA pseudouridylate synthase NRL19_18125 PF00990 Diguanylate cyclase, GGDEF domain NRL19_18125 PF00563 EAL domain NRL19_18125 PF03707 Bacterial signalling protein N terminal repeat NRL19_18135 PF00118 TCP-1/cpn60 chaperonin family NRL19_18140 PF00166 Chaperonin 10 Kd subunit NRL19_18145 PF01554 MatE NRL19_18150 PF04186 FxsA cytoplasmic membrane protein NRL19_18155 PF10415 Fumarase C C-terminus NRL19_18155 PF00206 Lyase NRL19_18160 PF03605 Anaerobic c4-dicarboxylate membrane transporter NRL19_18165 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_18165 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_18165 PF01610 Transposase NRL19_18170 PF04262 Glutamate-cysteine ligase NRL19_18175 PF00675 Insulinase (Peptidase family M16) NRL19_18175 PF05193 Peptidase M16 inactive domain NRL19_18180 PF09335 SNARE associated Golgi protein NRL19_18185 PF00109 Beta-ketoacyl synthase, N-terminal domain NRL19_18185 PF14765 Polyketide synthase dehydratase NRL19_18185 PF08659 KR domain NRL19_18185 PF00550 Phosphopantetheine attachment site NRL19_18185 PF16197 Ketoacyl-synthetase C-terminal extension NRL19_18185 PF08990 Erythronolide synthase docking NRL19_18185 PF08240 Alcohol dehydrogenase GroES-like domain NRL19_18185 PF00698 Acyl transferase domain NRL19_18185 PF02801 Beta-ketoacyl synthase, C-terminal domain NRL19_18195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRL19_18215 PF00970 Oxidoreductase FAD-binding domain NRL19_18215 PF00175 Oxidoreductase NAD-binding domain NRL19_18220 PF03948 Ribosomal protein L9, C-terminal domain NRL19_18220 PF01281 Ribosomal protein L9, N-terminal domain NRL19_18225 PF01084 Ribosomal protein S18 NRL19_18230 PF01250 Ribosomal protein S6 NRL19_18235 PF01566 Natural resistance-associated macrophage protein NRL19_18240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NRL19_18240 PF01411 tRNA synthetases class II (A) NRL19_18240 PF02272 DHHA1 domain NRL19_18245 PF13673 Acetyltransferase (GNAT) domain NRL19_18255 PF00588 SpoU rRNA Methylase family NRL19_18255 PF08032 RNA 2'-O ribose methyltransferase substrate binding NRL19_18260 PF17876 Cold shock domain NRL19_18260 PF08461 Ribonuclease R winged-helix domain NRL19_18260 PF08206 Ribonuclease B OB domain NRL19_18260 PF00773 RNB domain NRL19_18260 PF00575 S1 RNA binding domain NRL19_18265 PF00990 Diguanylate cyclase, GGDEF domain NRL19_18270 PF02664 S-Ribosylhomocysteinase (LuxS) NRL19_18280 PF00543 Nitrogen regulatory protein P-II NRL19_18285 PF00795 Carbon-nitrogen hydrolase NRL19_18285 PF02540 NAD synthase NRL19_18315 PF02401 LytB protein NRL19_18320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRL19_18325 PF01252 Signal peptidase (SPase) II NRL19_18330 PF08264 Anticodon-binding domain of tRNA NRL19_18330 PF00133 tRNA synthetases class I (I, L, M and V) NRL19_18330 PF06827 Zinc finger found in FPG and IleRS NRL19_18335 PF01687 Riboflavin kinase NRL19_18335 PF06574 FAD synthetase NRL19_18340 PF03023 Lipid II flippase MurJ NRL19_18345 PF01649 Ribosomal protein S20 NRL19_18350 PF01022 Bacterial regulatory protein, arsR family NRL19_18355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_18355 PF03466 LysR substrate binding domain NRL19_18365 PF06965 Na+/H+ antiporter 1 NRL19_18370 PF00303 Thymidylate synthase NRL19_18375 PF01790 Prolipoprotein diacylglyceryl transferase NRL19_18380 PF01590 GAF domain NRL19_18380 PF02896 PEP-utilising enzyme, TIM barrel domain NRL19_18380 PF05524 PEP-utilising enzyme, N-terminal NRL19_18380 PF00391 PEP-utilising enzyme, mobile domain NRL19_18385 PF00293 NUDIX domain NRL19_18390 PF02976 DNA mismatch repair enzyme MutH NRL19_18400 PF01245 Ribosomal protein L19 NRL19_18405 PF01746 tRNA (Guanine-1)-methyltransferase NRL19_18410 PF05239 PRC-barrel domain NRL19_18410 PF01782 RimM N-terminal domain NRL19_18415 PF00886 Ribosomal protein S16 NRL19_18420 PF02978 Signal peptide binding domain NRL19_18420 PF00448 SRP54-type protein, GTPase domain NRL19_18420 PF02881 SRP54-type protein, helical bundle domain NRL19_18425 PF01578 Cytochrome C assembly protein NRL19_18430 PF00571 CBS domain NRL19_18430 PF03471 Transporter associated domain NRL19_18430 PF01595 Cyclin M transmembrane N-terminal domain NRL19_18435 PF02082 Transcriptional regulator NRL19_18440 PF00970 Oxidoreductase FAD-binding domain NRL19_18440 PF00042 Globin NRL19_18440 PF00175 Oxidoreductase NAD-binding domain NRL19_18445 PF08238 Sel1 repeat NRL19_18450 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NRL19_18450 PF00056 lactate/malate dehydrogenase, NAD binding domain NRL19_18455 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_18460 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_18465 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRL19_18470 PF00005 ABC transporter NRL19_18475 PF01316 Arginine repressor, DNA binding domain NRL19_18475 PF02863 Arginine repressor, C-terminal domain NRL19_18480 PF04261 Dyp-type peroxidase family NRL19_18485 PF00005 ABC transporter NRL19_18485 PF08402 TOBE domain NRL19_18500 PF00543 Nitrogen regulatory protein P-II NRL19_18505 PF00472 RF-1 domain NRL19_18510 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NRL19_18510 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NRL19_18515 PF01773 Na+ dependent nucleoside transporter N-terminus NRL19_18515 PF07662 Na+ dependent nucleoside transporter C-terminus NRL19_18515 PF07670 Nucleoside recognition NRL19_18520 PF03466 LysR substrate binding domain NRL19_18520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_18525 PF00255 Glutathione peroxidase NRL19_18535 PF02595 Glycerate kinase family NRL19_18540 PF02447 GntP family permease NRL19_18545 PF13556 PucR C-terminal helix-turn-helix domain NRL19_18545 PF05651 Putative sugar diacid recognition NRL19_18545 PF17853 GGDEF-like domain NRL19_18550 PF06062 Uncharacterised protein family (UPF0231) NRL19_18570 PF02594 Uncharacterised ACR, YggU family COG1872 NRL19_18575 PF02325 YGGT family NRL19_18580 PF03807 NADP oxidoreductase coenzyme F420-dependent NRL19_18580 PF14748 Pyrroline-5-carboxylate reductase dimerisation NRL19_18585 PF01168 Alanine racemase, N-terminal domain NRL19_18590 PF00437 Type II/IV secretion system protein NRL19_18595 PF00437 Type II/IV secretion system protein NRL19_18600 PF03883 Peroxide stress protein YaaA NRL19_18605 PF00270 DEAD/DEAH box helicase NRL19_18605 PF00271 Helicase conserved C-terminal domain NRL19_18610 PF05175 Methyltransferase small domain NRL19_18615 PF05525 Branched-chain amino acid transport protein NRL19_18630 PF01475 Ferric uptake regulator family NRL19_18635 PF01207 Dihydrouridine synthase (Dus) NRL19_18645 PF13006 Insertion element 4 transposase N-terminal NRL19_18645 PF01609 Transposase DDE domain NRL19_18655 PF00216 Bacterial DNA-binding protein NRL19_18660 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ NRL19_18665 PF07238 PilZ domain NRL19_18670 PF18073 Rubredoxin metal binding domain NRL19_18685 PF18429 Domain of unknown function (DUF5609) NRL19_18695 PF13426 PAS domain NRL19_18695 PF00990 Diguanylate cyclase, GGDEF domain NRL19_18695 PF08447 PAS fold NRL19_18695 PF08448 PAS fold NRL19_18695 PF05231 MASE1 NRL19_18695 PF00563 EAL domain NRL19_18700 PF01048 Phosphorylase superfamily NRL19_18705 PF01676 Metalloenzyme superfamily NRL19_18710 PF02885 Glycosyl transferase family, helical bundle domain NRL19_18710 PF00591 Glycosyl transferase family, a/b domain NRL19_18710 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NRL19_18715 PF01791 DeoC/LacD family aldolase NRL19_18725 PF07662 Na+ dependent nucleoside transporter C-terminus NRL19_18725 PF01773 Na+ dependent nucleoside transporter N-terminus NRL19_18725 PF07670 Nucleoside recognition NRL19_18730 PF01026 TatD related DNase NRL19_18735 PF07963 Prokaryotic N-terminal methylation motif NRL19_18750 PF05958 tRNA (Uracil-5-)-methyltransferase NRL19_18750 PF01938 TRAM domain NRL19_18755 PF00909 Ammonium Transporter Family NRL19_18775 PF03739 Lipopolysaccharide export system permease LptF/LptG NRL19_18780 PF03739 Lipopolysaccharide export system permease LptF/LptG NRL19_18785 PF00883 Cytosol aminopeptidase family, catalytic domain NRL19_18785 PF02789 Cytosol aminopeptidase family, N-terminal domain NRL19_18795 PF00133 tRNA synthetases class I (I, L, M and V) NRL19_18795 PF10458 Valyl tRNA synthetase tRNA binding arm NRL19_18795 PF08264 Anticodon-binding domain of tRNA NRL19_18800 PF00571 CBS domain NRL19_18800 PF03471 Transporter associated domain NRL19_18800 PF01595 Cyclin M transmembrane N-terminal domain NRL19_18805 PF09335 SNARE associated Golgi protein NRL19_18810 PF00768 D-alanyl-D-alanine carboxypeptidase NRL19_18815 PF01610 Transposase NRL19_18815 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_18815 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_18850 PF02599 Global regulator protein family NRL19_18855 PF00696 Amino acid kinase family NRL19_18855 PF01842 ACT domain NRL19_18855 PF13840 ACT domain NRL19_18860 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NRL19_18860 PF01411 tRNA synthetases class II (A) NRL19_18860 PF02272 DHHA1 domain NRL19_18865 PF02631 RecX family NRL19_18870 PF00154 recA bacterial DNA recombination protein NRL19_18875 PF02464 Competence-damaged protein NRL19_18885 PF01624 MutS domain I NRL19_18885 PF05188 MutS domain II NRL19_18885 PF05192 MutS domain III NRL19_18885 PF05190 MutS family domain IV NRL19_18885 PF00488 MutS domain V NRL19_18890 PF02028 BCCT, betaine/carnitine/choline family transporter NRL19_18935 PF02660 Glycerol-3-phosphate acyltransferase NRL19_18940 PF02152 Dihydroneopterin aldolase NRL19_18945 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NRL19_18955 PF13808 DDE_Tnp_1-associated NRL19_18955 PF01609 Transposase DDE domain NRL19_18960 PF07690 Major Facilitator Superfamily NRL19_18965 PF02492 CobW/HypB/UreG, nucleotide-binding domain NRL19_18965 PF07683 Cobalamin synthesis protein cobW C-terminal domain NRL19_18970 PF04030 D-arabinono-1,4-lactone oxidase NRL19_18970 PF01565 FAD binding domain NRL19_18975 PF01810 LysE type translocator NRL19_18980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_18980 PF03466 LysR substrate binding domain NRL19_18985 PF00563 EAL domain NRL19_18985 PF12792 CSS motif domain associated with EAL NRL19_18990 PF00330 Aconitase family (aconitate hydratase) NRL19_18990 PF11791 Aconitate B N-terminal domain NRL19_18990 PF06434 Aconitate hydratase 2 N-terminus NRL19_18995 PF01734 Patatin-like phospholipase NRL19_19000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRL19_19000 PF00672 HAMP domain NRL19_19000 PF12729 Four helix bundle sensory module for signal transduction NRL19_19010 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRL19_19010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRL19_19015 PF02817 e3 binding domain NRL19_19015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NRL19_19015 PF00364 Biotin-requiring enzyme NRL19_19020 PF00456 Transketolase, thiamine diphosphate binding domain NRL19_19020 PF17831 Pyruvate dehydrogenase E1 component middle domain NRL19_19025 PF07729 FCD domain NRL19_19025 PF00392 Bacterial regulatory proteins, gntR family NRL19_19030 PF01510 N-acetylmuramoyl-L-alanine amidase NRL19_19040 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NRL19_19040 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NRL19_19045 PF07963 Prokaryotic N-terminal methylation motif NRL19_19050 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NRL19_19050 PF00437 Type II/IV secretion system protein NRL19_19055 PF00482 Type II secretion system (T2SS), protein F NRL19_19060 PF01478 Type IV leader peptidase family NRL19_19060 PF06750 Bacterial Peptidase A24 N-terminal domain NRL19_19065 PF01121 Dephospho-CoA kinase NRL19_19070 PF07072 Cell division protein NRL19_19075 PF03884 DNA gyrase inhibitor YacG NRL19_19080 PF00293 NUDIX domain NRL19_19095 PF02810 SEC-C motif NRL19_19095 PF01043 SecA preprotein cross-linking domain NRL19_19095 PF07516 SecA Wing and Scaffold domain NRL19_19095 PF07517 SecA DEAD-like domain NRL19_19105 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NRL19_19110 PF00091 Tubulin/FtsZ family, GTPase domain NRL19_19110 PF12327 FtsZ family, C-terminal domain NRL19_19115 PF02491 SHS2 domain inserted in FTSA NRL19_19120 PF08478 POTRA domain, FtsQ-type NRL19_19120 PF03799 Cell division protein FtsQ NRL19_19125 PF02875 Mur ligase family, glutamate ligase domain NRL19_19125 PF01225 Mur ligase family, catalytic domain NRL19_19125 PF08245 Mur ligase middle domain NRL19_19130 PF04101 Glycosyltransferase family 28 C-terminal domain NRL19_19130 PF03033 Glycosyltransferase family 28 N-terminal domain NRL19_19135 PF01098 Cell cycle protein NRL19_19140 PF02875 Mur ligase family, glutamate ligase domain NRL19_19140 PF08245 Mur ligase middle domain NRL19_19145 PF00953 Glycosyl transferase family 4 NRL19_19145 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NRL19_19150 PF01225 Mur ligase family, catalytic domain NRL19_19150 PF08245 Mur ligase middle domain NRL19_19150 PF02875 Mur ligase family, glutamate ligase domain NRL19_19155 PF01225 Mur ligase family, catalytic domain NRL19_19155 PF02875 Mur ligase family, glutamate ligase domain NRL19_19155 PF08245 Mur ligase middle domain NRL19_19160 PF03717 Penicillin-binding Protein dimerisation domain NRL19_19160 PF00905 Penicillin binding protein transpeptidase domain NRL19_19165 PF04999 Cell division protein FtsL NRL19_19170 PF01795 MraW methylase family NRL19_19175 PF02381 MraZ protein, putative antitoxin-like NRL19_19190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NRL19_19195 PF04348 LppC putative lipoprotein NRL19_19200 PF02021 Uncharacterised protein family UPF0102 NRL19_19205 PF13580 SIS domain NRL19_19210 PF04972 BON domain NRL19_19215 PF04386 Stringent starvation protein B NRL19_19220 PF02798 Glutathione S-transferase, N-terminal domain NRL19_19220 PF00043 Glutathione S-transferase, C-terminal domain NRL19_19225 PF02167 Cytochrome C1 family NRL19_19230 PF00033 Cytochrome b/b6/petB NRL19_19230 PF00032 Cytochrome b(C-terminal)/b6/petD NRL19_19235 PF00355 Rieske [2Fe-2S] domain NRL19_19235 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NRL19_19240 PF00380 Ribosomal protein S9/S16 NRL19_19245 PF00572 Ribosomal protein L13 NRL19_19250 PF03969 AFG1-like ATPase NRL19_19260 PF00595 PDZ domain NRL19_19260 PF13180 PDZ domain NRL19_19265 PF13180 PDZ domain NRL19_19295 PF01979 Amidohydrolase family NRL19_19300 PF03841 L-seryl-tRNA selenium transferase NRL19_19305 PF07071 KDGP aldolase NRL19_19310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRL19_19310 PF02378 Phosphotransferase system, EIIC NRL19_19310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRL19_19315 PF00381 PTS HPr component phosphorylation site NRL19_19320 PF03668 P-loop ATPase protein family NRL19_19325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRL19_19330 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NRL19_19335 PF00309 Sigma-54 factor, Activator interacting domain (AID) NRL19_19335 PF04963 Sigma-54 factor, core binding domain NRL19_19335 PF04552 Sigma-54, DNA binding domain NRL19_19340 PF00005 ABC transporter NRL19_19340 PF12399 Branched-chain amino acid ATP-binding cassette transporter NRL19_19345 PF03968 OstA-like protein NRL19_19360 PF00571 CBS domain NRL19_19360 PF01380 SIS domain NRL19_19365 PF00005 ABC transporter NRL19_19370 PF02405 Permease MlaE NRL19_19375 PF02470 MlaD protein NRL19_19380 PF05494 MlaC protein NRL19_19390 PF01722 BolA-like protein NRL19_19395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NRL19_19400 PF03692 Putative zinc- or iron-chelating domain NRL19_19405 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NRL19_19420 PF07715 TonB-dependent Receptor Plug Domain NRL19_19420 PF00593 TonB dependent receptor NRL19_19435 PF01638 HxlR-like helix-turn-helix NRL19_19440 PF08803 Putative mono-oxygenase ydhR NRL19_19455 PF06055 Exopolysaccharide synthesis, ExoD NRL19_19460 PF00990 Diguanylate cyclase, GGDEF domain NRL19_19465 PF13036 Peptidoglycan-synthase activator LpoB NRL19_19475 PF01609 Transposase DDE domain NRL19_19495 PF00589 Phage integrase family NRL19_19495 PF13356 Arm DNA-binding domain NRL19_19495 PF14659 Phage integrase, N-terminal SAM-like domain NRL19_19505 PF00999 Sodium/hydrogen exchanger family NRL19_19510 PF00809 Pterin binding enzyme NRL19_19510 PF02310 B12 binding domain NRL19_19510 PF02607 B12 binding domain NRL19_19510 PF02965 Vitamin B12 dependent methionine synthase, activation domain NRL19_19510 PF02574 Homocysteine S-methyltransferase NRL19_19520 PF08443 RimK-like ATP-grasp domain NRL19_19520 PF18030 RimK PreATP-grasp domain NRL19_19525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_19530 PF00486 Transcriptional regulatory protein, C terminal NRL19_19530 PF00072 Response regulator receiver domain NRL19_19545 PF13667 ThiC-associated domain NRL19_19545 PF01964 Radical SAM ThiC family NRL19_19550 PF02581 Thiamine monophosphate synthase NRL19_19555 PF00899 ThiF family NRL19_19565 PF05690 Thiazole biosynthesis protein ThiG NRL19_19570 PF04055 Radical SAM superfamily NRL19_19570 PF06968 Biotin and Thiamin Synthesis associated domain NRL19_19580 PF01609 Transposase DDE domain NRL19_19580 PF13808 DDE_Tnp_1-associated NRL19_19585 PF01609 Transposase DDE domain NRL19_19595 PF04471 Restriction endonuclease NRL19_19595 PF14338 Mrr N-terminal domain NRL19_19605 PF12161 HsdM N-terminal domain NRL19_19605 PF02384 N-6 DNA Methylase NRL19_19610 PF01420 Type I restriction modification DNA specificity domain NRL19_19630 PF04320 Protein with unknown function (DUF469) NRL19_19640 PF01695 IstB-like ATP binding protein NRL19_19645 PF00665 Integrase core domain NRL19_19660 PF04228 Putative neutral zinc metallopeptidase NRL19_19670 PF07690 Major Facilitator Superfamily NRL19_19675 PF01914 MarC family integral membrane protein NRL19_19685 PF01523 Putative modulator of DNA gyrase NRL19_19690 PF00795 Carbon-nitrogen hydrolase NRL19_19695 PF13502 AsmA-like C-terminal region NRL19_19695 PF13116 Protein of unknown function NRL19_19700 PF10150 Ribonuclease E/G family NRL19_19700 PF00575 S1 RNA binding domain NRL19_19705 PF02545 Maf-like protein NRL19_19710 PF04093 rod shape-determining protein MreD NRL19_19715 PF04085 rod shape-determining protein MreC NRL19_19760 PF12792 CSS motif domain associated with EAL NRL19_19760 PF00563 EAL domain NRL19_19765 PF01699 Sodium/calcium exchanger protein NRL19_19770 PF00221 Aromatic amino acid lyase NRL19_19775 PF01175 Urocanase Rossmann-like domain NRL19_19775 PF17392 Urocanase C-terminal domain NRL19_19775 PF17391 Urocanase N-terminal domain NRL19_19780 PF00491 Arginase family NRL19_19785 PF01979 Amidohydrolase family NRL19_19795 PF00392 Bacterial regulatory proteins, gntR family NRL19_19795 PF07702 UTRA domain NRL19_19800 PF00484 Carbonic anhydrase NRL19_19805 PF04545 Sigma-70, region 4 NRL19_19805 PF04542 Sigma-70 region 2 NRL19_19805 PF00140 Sigma-70 factor, region 1.2 NRL19_19810 PF01610 Transposase NRL19_19810 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_19810 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_19815 PF18075 FtsX extracellular domain NRL19_19820 PF00005 ABC transporter NRL19_19825 PF02881 SRP54-type protein, helical bundle domain NRL19_19825 PF00448 SRP54-type protein, GTPase domain NRL19_19840 PF07226 Protein of unknown function (DUF1422) NRL19_19845 PF00440 Bacterial regulatory proteins, tetR family NRL19_19855 PF13091 PLD-like domain NRL19_19865 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRL19_19865 PF01464 Transglycosylase SLT domain NRL19_19875 PF02416 mttA/Hcf106 family NRL19_19880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_19880 PF03466 LysR substrate binding domain NRL19_19885 PF01914 MarC family integral membrane protein NRL19_19890 PF10678 Protein of unknown function (DUF2492) NRL19_19895 PF00375 Sodium:dicarboxylate symporter family NRL19_19905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_19905 PF03466 LysR substrate binding domain NRL19_19910 PF13533 Biotin-lipoyl like NRL19_19915 PF07690 Major Facilitator Superfamily NRL19_19920 PF07947 YhhN family NRL19_19935 PF16868 NMT1-like family NRL19_19940 PF00326 Prolyl oligopeptidase family NRL19_19940 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NRL19_19955 PF00106 short chain dehydrogenase NRL19_19960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_19960 PF03466 LysR substrate binding domain NRL19_19965 PF02525 Flavodoxin-like fold NRL19_19970 PF02254 TrkA-N domain NRL19_19970 PF00999 Sodium/hydrogen exchanger family NRL19_19985 PF01695 IstB-like ATP binding protein NRL19_19990 PF00665 Integrase core domain NRL19_20025 PF01196 Ribosomal protein L17 NRL19_20030 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NRL19_20030 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NRL19_20030 PF01000 RNA polymerase Rpb3/RpoA insert domain NRL19_20035 PF00163 Ribosomal protein S4/S9 N-terminal domain NRL19_20035 PF01479 S4 domain NRL19_20040 PF00411 Ribosomal protein S11 NRL19_20045 PF00416 Ribosomal protein S13/S18 NRL19_20050 PF00444 Ribosomal protein L36 NRL19_20055 PF00344 SecY translocase NRL19_20060 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NRL19_20065 PF00327 Ribosomal protein L30p/L7e NRL19_20070 PF00333 Ribosomal protein S5, N-terminal domain NRL19_20070 PF03719 Ribosomal protein S5, C-terminal domain NRL19_20075 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NRL19_20080 PF00347 Ribosomal protein L6 NRL19_20085 PF00410 Ribosomal protein S8 NRL19_20090 PF00253 Ribosomal protein S14p/S29e NRL19_20095 PF00281 Ribosomal protein L5 NRL19_20095 PF00673 ribosomal L5P family C-terminus NRL19_20100 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NRL19_20100 PF00467 KOW motif NRL19_20105 PF00238 Ribosomal protein L14p/L23e NRL19_20110 PF00366 Ribosomal protein S17 NRL19_20115 PF00831 Ribosomal L29 protein NRL19_20120 PF00252 Ribosomal protein L16p/L10e NRL19_20125 PF07650 KH domain NRL19_20125 PF00189 Ribosomal protein S3, C-terminal domain NRL19_20130 PF00237 Ribosomal protein L22p/L17e NRL19_20135 PF00203 Ribosomal protein S19 NRL19_20140 PF00181 Ribosomal Proteins L2, RNA binding domain NRL19_20140 PF03947 Ribosomal Proteins L2, C-terminal domain NRL19_20145 PF00276 Ribosomal protein L23 NRL19_20150 PF00573 Ribosomal protein L4/L1 family NRL19_20155 PF00297 Ribosomal protein L3 NRL19_20160 PF00338 Ribosomal protein S10p/S20e NRL19_20170 PF00512 His Kinase A (phospho-acceptor) domain NRL19_20170 PF00672 HAMP domain NRL19_20170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_20175 PF00072 Response regulator receiver domain NRL19_20175 PF00486 Transcriptional regulatory protein, C terminal NRL19_20180 PF01272 Transcription elongation factor, GreA/GreB, C-term NRL19_20180 PF03449 Transcription elongation factor, N-terminal NRL19_20185 PF17674 HHH domain NRL19_20185 PF00575 S1 RNA binding domain NRL19_20185 PF09371 Tex-like protein N-terminal domain NRL19_20185 PF16921 Tex protein YqgF-like domain NRL19_20200 PF00561 alpha/beta hydrolase fold NRL19_20205 PF00156 Phosphoribosyl transferase domain NRL19_20210 PF01521 Iron-sulphur cluster biosynthesis NRL19_20210 PF01106 NifU-like domain NRL19_20215 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NRL19_20215 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NRL19_20220 PF02556 Preprotein translocase subunit SecB NRL19_20225 PF00581 Rhodanese-like domain NRL19_20230 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NRL19_20230 PF01676 Metalloenzyme superfamily NRL19_20235 PF01551 Peptidase family M23 NRL19_20245 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRL19_20245 PF00356 Bacterial regulatory proteins, lacI family NRL19_20260 PF01081 KDPG and KHG aldolase NRL19_20265 PF00920 Dehydratase family NRL19_20270 PF01202 Shikimate kinase NRL19_20275 PF02447 GntP family permease NRL19_20280 PF13091 PLD-like domain NRL19_20285 PF00271 Helicase conserved C-terminal domain NRL19_20285 PF17191 RecG wedge domain NRL19_20285 PF00270 DEAD/DEAH box helicase NRL19_20295 PF00583 Acetyltransferase (GNAT) family NRL19_20295 PF09500 Putative thioesterase (yiiD_Cterm) NRL19_20305 PF02580 D-Tyr-tRNA(Tyr) deacylase NRL19_20310 PF03631 Virulence factor BrkB NRL19_20315 PF03144 Elongation factor Tu domain 2 NRL19_20315 PF00009 Elongation factor Tu GTP binding domain NRL19_20315 PF00679 Elongation factor G C-terminus NRL19_20320 PF00120 Glutamine synthetase, catalytic domain NRL19_20320 PF03951 Glutamine synthetase, beta-Grasp domain NRL19_20330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_20330 PF00512 His Kinase A (phospho-acceptor) domain NRL19_20330 PF00989 PAS fold NRL19_20335 PF02954 Bacterial regulatory protein, Fis family NRL19_20335 PF00072 Response regulator receiver domain NRL19_20335 PF00158 Sigma-54 interaction domain NRL19_20340 PF00962 Adenosine/AMP deaminase NRL19_20345 PF06969 HemN C-terminal domain NRL19_20345 PF04055 Radical SAM superfamily NRL19_20350 PF10675 Protein of unknown function (DUF2489) NRL19_20355 PF04220 Der GTPase activator (YihI) NRL19_20360 PF13808 DDE_Tnp_1-associated NRL19_20360 PF01609 Transposase DDE domain NRL19_20365 PF00034 Cytochrome c NRL19_20370 PF01926 50S ribosome-binding GTPase NRL19_20380 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NRL19_20380 PF01488 Shikimate / quinate 5-dehydrogenase NRL19_20380 PF08501 Shikimate dehydrogenase substrate binding domain NRL19_20385 PF01218 Coproporphyrinogen III oxidase NRL19_20390 PF01300 Telomere recombination NRL19_20395 PF01396 Topoisomerase DNA binding C4 zinc finger NRL19_20400 PF04361 Protein of unknown function (DUF494) NRL19_20405 PF02481 DNA recombination-mediator protein A NRL19_20405 PF17782 DprA winged helix domain NRL19_20415 PF01327 Polypeptide deformylase NRL19_20420 PF02911 Formyl transferase, C-terminal domain NRL19_20420 PF00551 Formyl transferase NRL19_20425 PF01189 16S rRNA methyltransferase RsmB/F NRL19_20425 PF01029 NusB family NRL19_20430 PF02080 TrkA-C domain NRL19_20430 PF02254 TrkA-N domain NRL19_20435 PF02386 Cation transport protein NRL19_20440 PF02646 RmuC family NRL19_20455 PF02082 Transcriptional regulator NRL19_20460 PF00294 pfkB family carbohydrate kinase NRL19_20465 PF03466 LysR substrate binding domain NRL19_20465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_20470 PF02540 NAD synthase NRL19_20470 PF00117 Glutamine amidotransferase class-I NRL19_20470 PF00958 GMP synthase C terminal domain NRL19_20475 PF00171 Aldehyde dehydrogenase family NRL19_20480 PF00202 Aminotransferase class-III NRL19_20485 PF01381 Helix-turn-helix NRL19_20485 PF07883 Cupin domain NRL19_20490 PF00171 Aldehyde dehydrogenase family NRL19_20500 PF00892 EamA-like transporter family NRL19_20505 PF12833 Helix-turn-helix domain NRL19_20510 PF01810 LysE type translocator NRL19_20515 PF06206 CpeT/CpcT family (DUF1001) NRL19_20535 PF14001 YdfZ protein NRL19_20550 PF03466 LysR substrate binding domain NRL19_20550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_20585 PF01609 Transposase DDE domain NRL19_20585 PF13808 DDE_Tnp_1-associated NRL19_20595 PF00580 UvrD/REP helicase N-terminal domain NRL19_20595 PF13361 UvrD-like helicase C-terminal domain NRL19_20600 PF02608 ABC transporter substrate-binding protein PnrA-like NRL19_20605 PF00005 ABC transporter NRL19_20610 PF02653 Branched-chain amino acid transport system / permease component NRL19_20615 PF02653 Branched-chain amino acid transport system / permease component NRL19_20625 PF05598 Transposase domain (DUF772) NRL19_20625 PF01609 Transposase DDE domain NRL19_20630 PF03466 LysR substrate binding domain NRL19_20630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRL19_20635 PF08240 Alcohol dehydrogenase GroES-like domain NRL19_20635 PF00107 Zinc-binding dehydrogenase NRL19_20640 PF00756 Putative esterase NRL19_20655 PF12867 DinB superfamily NRL19_20655 PF03781 Sulfatase-modifying factor enzyme 1 NRL19_20660 PF13593 SBF-like CPA transporter family (DUF4137) NRL19_20665 PF13520 Amino acid permease NRL19_20670 PF01588 Putative tRNA binding domain NRL19_20675 PF13520 Amino acid permease NRL19_20680 PF04074 YhcH/YjgK/YiaL NRL19_20685 PF16353 Domain of unknown function(DUF4981) NRL19_20685 PF00703 Glycosyl hydrolases family 2 NRL19_20685 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NRL19_20685 PF02837 Glycosyl hydrolases family 2, sugar binding domain NRL19_20685 PF02929 Beta galactosidase small chain NRL19_20690 PF00356 Bacterial regulatory proteins, lacI family NRL19_20725 PF12724 Flavodoxin domain NRL19_20730 PF02386 Cation transport protein NRL19_20735 PF09186 Domain of unknown function (DUF1949) NRL19_20735 PF01205 Uncharacterized protein family UPF0029 NRL19_20740 PF00557 Metallopeptidase family M24 NRL19_20745 PF13193 AMP-binding enzyme C-terminal domain NRL19_20745 PF00501 AMP-binding enzyme NRL19_20750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NRL19_20750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NRL19_20750 PF00378 Enoyl-CoA hydratase/isomerase NRL19_20755 PF00108 Thiolase, N-terminal domain NRL19_20755 PF02803 Thiolase, C-terminal domain NRL19_20760 PF00072 Response regulator receiver domain NRL19_20760 PF00486 Transcriptional regulatory protein, C terminal NRL19_20765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_20765 PF00512 His Kinase A (phospho-acceptor) domain NRL19_20765 PF00672 HAMP domain NRL19_20770 PF01547 Bacterial extracellular solute-binding protein NRL19_20785 PF01206 Sulfurtransferase TusA NRL19_20790 PF01042 Endoribonuclease L-PSP NRL19_20810 PF00691 OmpA family NRL19_20810 PF13488 Glycine zipper NRL19_20820 PF00857 Isochorismatase family NRL19_20825 PF03352 Methyladenine glycosylase NRL19_20830 PF02091 Glycyl-tRNA synthetase alpha subunit NRL19_20835 PF05746 DALR anticodon binding domain NRL19_20835 PF02092 Glycyl-tRNA synthetase beta subunit NRL19_20845 PF01609 Transposase DDE domain NRL19_20845 PF05598 Transposase domain (DUF772) NRL19_20880 PF03222 Tryptophan/tyrosine permease family NRL19_20885 PF03222 Tryptophan/tyrosine permease family NRL19_20890 PF01212 Beta-eliminating lyase NRL19_20895 PF13808 DDE_Tnp_1-associated NRL19_20895 PF01609 Transposase DDE domain NRL19_20900 PF01609 Transposase DDE domain NRL19_20905 PF12801 4Fe-4S binding domain NRL19_20915 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRL19_20915 PF18113 Rubredoxin binding C-terminal domain NRL19_20920 PF00301 Rubredoxin NRL19_20920 PF00258 Flavodoxin NRL19_20920 PF00753 Metallo-beta-lactamase superfamily NRL19_20925 PF01590 GAF domain NRL19_20925 PF00158 Sigma-54 interaction domain NRL19_20930 PF00356 Bacterial regulatory proteins, lacI family NRL19_20935 PF13458 Periplasmic binding protein NRL19_20940 PF02653 Branched-chain amino acid transport system / permease component NRL19_20945 PF11862 Domain of unknown function (DUF3382) NRL19_20945 PF02653 Branched-chain amino acid transport system / permease component NRL19_20950 PF12399 Branched-chain amino acid ATP-binding cassette transporter NRL19_20950 PF00005 ABC transporter NRL19_20955 PF00005 ABC transporter NRL19_20965 PF01810 LysE type translocator NRL19_20970 PF00581 Rhodanese-like domain NRL19_20975 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NRL19_20975 PF01694 Rhomboid family NRL19_20980 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_20980 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_20980 PF01610 Transposase NRL19_20985 PF12262 Bacterial virulence factor lipase N-terminal NRL19_20990 PF04380 Membrane fusogenic activity NRL19_20995 PF00175 Oxidoreductase NAD-binding domain NRL19_21000 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NRL19_21010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRL19_21010 PF07498 Rho termination factor, N-terminal domain NRL19_21010 PF07497 Rho termination factor, RNA-binding domain NRL19_21015 PF00085 Thioredoxin NRL19_21020 PF00271 Helicase conserved C-terminal domain NRL19_21020 PF00270 DEAD/DEAH box helicase NRL19_21025 PF02541 Ppx/GppA phosphatase family NRL19_21035 PF04445 Putative SAM-dependent methyltransferase NRL19_21040 PF00990 Diguanylate cyclase, GGDEF domain NRL19_21040 PF03707 Bacterial signalling protein N terminal repeat NRL19_21040 PF00563 EAL domain NRL19_21050 PF01609 Transposase DDE domain NRL19_21060 PF01432 Peptidase family M3 NRL19_21065 PF00490 Delta-aminolevulinic acid dehydratase NRL19_21070 PF01026 TatD related DNase NRL19_21075 PF00902 Sec-independent protein translocase protein (TatC) NRL19_21080 PF02416 mttA/Hcf106 family NRL19_21085 PF02416 mttA/Hcf106 family NRL19_21090 PF03109 ABC1 family NRL19_21095 PF02036 SCP-2 sterol transfer family NRL19_21100 PF01209 ubiE/COQ5 methyltransferase family NRL19_21105 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NRL19_21110 PF07969 Amidohydrolase family NRL19_21140 PF00132 Bacterial transferase hexapeptide (six repeats) NRL19_21145 PF01367 5'-3' exonuclease, C-terminal SAM fold NRL19_21145 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NRL19_21145 PF00476 DNA polymerase family A NRL19_21145 PF01612 3'-5' exonuclease NRL19_21155 PF06005 Cell division protein ZapB NRL19_21165 PF00132 Bacterial transferase hexapeptide (six repeats) NRL19_21165 PF06426 Serine acetyltransferase, N-terminal NRL19_21170 PF01545 Cation efflux family NRL19_21170 PF16916 Dimerisation domain of Zinc Transporter NRL19_21175 PF00486 Transcriptional regulatory protein, C terminal NRL19_21175 PF00072 Response regulator receiver domain NRL19_21180 PF16527 Two-component sensor protein CpxA, periplasmic domain NRL19_21180 PF00672 HAMP domain NRL19_21180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_21180 PF00512 His Kinase A (phospho-acceptor) domain NRL19_21185 PF00588 SpoU rRNA Methylase family NRL19_21190 PF01554 MatE NRL19_21195 PF02630 SCO1/SenC NRL19_21205 PF01726 LexA DNA binding domain NRL19_21205 PF00717 Peptidase S24-like NRL19_21210 PF01553 Acyltransferase NRL19_21215 PF01040 UbiA prenyltransferase family NRL19_21220 PF04345 Chorismate lyase NRL19_21225 PF03748 Flagellar basal body-associated protein FliL NRL19_21245 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRL19_21245 PF00356 Bacterial regulatory proteins, lacI family NRL19_21250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRL19_21280 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) NRL19_21300 PF13439 Glycosyltransferase Family 4 NRL19_21305 PF01370 NAD dependent epimerase/dehydratase family NRL19_21310 PF08360 QacR-like protein, C-terminal region NRL19_21310 PF00440 Bacterial regulatory proteins, tetR family NRL19_21315 PF00155 Aminotransferase class I and II NRL19_21320 PF01610 Transposase NRL19_21320 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_21320 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_21325 PF08240 Alcohol dehydrogenase GroES-like domain NRL19_21325 PF00107 Zinc-binding dehydrogenase NRL19_21330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NRL19_21335 PF03707 Bacterial signalling protein N terminal repeat NRL19_21335 PF00990 Diguanylate cyclase, GGDEF domain NRL19_21335 PF00563 EAL domain NRL19_21340 PF00580 UvrD/REP helicase N-terminal domain NRL19_21340 PF13361 UvrD-like helicase C-terminal domain NRL19_21345 PF00266 Aminotransferase class-V NRL19_21350 PF02657 Fe-S metabolism associated domain NRL19_21355 PF00899 ThiF family NRL19_21390 PF03544 Gram-negative bacterial TonB protein C-terminal NRL19_21395 PF02472 Biopolymer transport protein ExbD/TolR NRL19_21400 PF01618 MotA/TolQ/ExbB proton channel family NRL19_21405 PF01618 MotA/TolQ/ExbB proton channel family NRL19_21415 PF00196 Bacterial regulatory proteins, luxR family NRL19_21415 PF03472 Autoinducer binding domain NRL19_21420 PF01380 SIS domain NRL19_21425 PF00455 DeoR C terminal sensor domain NRL19_21425 PF08220 DeoR-like helix-turn-helix domain NRL19_21430 PF00072 Response regulator receiver domain NRL19_21430 PF00486 Transcriptional regulatory protein, C terminal NRL19_21435 PF00512 His Kinase A (phospho-acceptor) domain NRL19_21435 PF00672 HAMP domain NRL19_21435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRL19_21440 PF00905 Penicillin binding protein transpeptidase domain NRL19_21450 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_21450 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_21450 PF01610 Transposase NRL19_21455 PF06123 Inner membrane protein CreD NRL19_21460 PF00132 Bacterial transferase hexapeptide (six repeats) NRL19_21460 PF12804 MobA-like NTP transferase domain NRL19_21460 PF14602 Hexapeptide repeat of succinyl-transferase NRL19_21465 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NRL19_21465 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NRL19_21470 PF02874 ATP synthase alpha/beta family, beta-barrel domain NRL19_21470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRL19_21475 PF00231 ATP synthase NRL19_21480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRL19_21480 PF00306 ATP synthase alpha/beta chain, C terminal domain NRL19_21480 PF02874 ATP synthase alpha/beta family, beta-barrel domain NRL19_21485 PF00213 ATP synthase delta (OSCP) subunit NRL19_21490 PF00430 ATP synthase B/B' CF(0) NRL19_21495 PF00137 ATP synthase subunit C NRL19_21500 PF00119 ATP synthase A chain NRL19_21510 PF02195 ParB-like nuclease domain NRL19_21510 PF17762 HTH domain found in ParB protein NRL19_21515 PF13614 AAA domain NRL19_21520 PF02527 rRNA small subunit methyltransferase G NRL19_21525 PF01134 Glucose inhibited division protein A NRL19_21525 PF13932 GidA associated domain NRL19_21530 PF00258 Flavodoxin NRL19_21535 PF07715 TonB-dependent Receptor Plug Domain NRL19_21535 PF00593 TonB dependent receptor NRL19_21540 PF00005 ABC transporter NRL19_21545 PF00005 ABC transporter NRL19_21550 PF01497 Periplasmic binding protein NRL19_21555 PF01032 FecCD transport family NRL19_21560 PF10396 GTP-binding protein TrmE N-terminus NRL19_21560 PF01926 50S ribosome-binding GTPase NRL19_21560 PF12631 MnmE helical domain NRL19_21565 PF14849 YidC periplasmic domain NRL19_21565 PF02096 60Kd inner membrane protein NRL19_21570 PF01809 Putative membrane protein insertion efficiency factor NRL19_21575 PF00825 Ribonuclease P NRL19_21580 PF00468 Ribosomal protein L34 NRL19_21585 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NRL19_21585 PF01610 Transposase NRL19_21585 PF13542 Helix-turn-helix domain of transposase family ISL3 NRL19_21590 PF00005 ABC transporter NRL19_21595 PF00528 Binding-protein-dependent transport system inner membrane component NRL19_21600 PF00497 Bacterial extracellular solute-binding proteins, family 3