locus-tag class description IL332_00005 PF00308 Bacterial dnaA protein IL332_00005 PF08299 Bacterial dnaA protein helix-turn-helix IL332_00005 PF11638 DnaA N-terminal domain IL332_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain IL332_00010 PF02767 DNA polymerase III beta subunit, central domain IL332_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain IL332_00015 PF02463 RecF/RecN/SMC N terminal domain IL332_00020 PF00986 DNA gyrase B subunit, carboxyl terminus IL332_00020 PF00204 DNA gyrase B IL332_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_00020 PF01751 Toprim domain IL332_00020 PF18053 DNA gyrase B subunit insert domain IL332_00025 PF02311 AraC-like ligand binding domain IL332_00025 PF12833 Helix-turn-helix domain IL332_00030 PF12706 Beta-lactamase superfamily domain IL332_00035 PF00011 Hsp20/alpha crystallin family IL332_00040 PF00011 Hsp20/alpha crystallin family IL332_00045 PF00155 Aminotransferase class I and II IL332_00060 PF07690 Major Facilitator Superfamily IL332_00065 PF00486 Transcriptional regulatory protein, C terminal IL332_00065 PF00072 Response regulator receiver domain IL332_00070 PF00512 His Kinase A (phospho-acceptor) domain IL332_00070 PF13492 GAF domain IL332_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_00070 PF02702 Osmosensitive K+ channel His kinase sensor domain IL332_00070 PF13493 Domain of unknown function (DUF4118) IL332_00075 PF02669 K+-transporting ATPase, c chain IL332_00085 PF03814 Potassium-transporting ATPase A subunit IL332_00090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IL332_00090 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL332_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_00095 PF00512 His Kinase A (phospho-acceptor) domain IL332_00095 PF00497 Bacterial extracellular solute-binding proteins, family 3 IL332_00100 PF00873 AcrB/AcrD/AcrF family IL332_00105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL332_00110 PF00440 Bacterial regulatory proteins, tetR family IL332_00145 PF12146 Serine aminopeptidase, S33 IL332_00150 PF00132 Bacterial transferase hexapeptide (six repeats) IL332_00155 PF12105 SpoU, rRNA methylase, C-terminal IL332_00155 PF00588 SpoU rRNA Methylase family IL332_00160 PF13291 ACT domain IL332_00160 PF04607 Region found in RelA / SpoT proteins IL332_00160 PF02824 TGS domain IL332_00165 PF01192 RNA polymerase Rpb6 IL332_00170 PF00625 Guanylate kinase IL332_00175 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IL332_00190 PF00892 EamA-like transporter family IL332_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_00210 PF03466 LysR substrate binding domain IL332_00215 PF00579 tRNA synthetases class I (W and Y) IL332_00220 PF00582 Universal stress protein family IL332_00225 PF12241 Trans-2-enoyl-CoA reductase catalytic region IL332_00225 PF07055 Enoyl reductase FAD binding domain IL332_00225 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IL332_00230 PF05230 MASE2 domain IL332_00230 PF00990 Diguanylate cyclase, GGDEF domain IL332_00235 PF00210 Ferritin-like domain IL332_00245 PF07690 Major Facilitator Superfamily IL332_00250 PF01810 LysE type translocator IL332_00265 PF16967 E-set like domain IL332_00265 PF15976 CS1-pili formation C-terminal IL332_00270 PF18649 EcpB C-terminal domain IL332_00275 PF16449 Fimbrillin MatB IL332_00280 PF00196 Bacterial regulatory proteins, luxR family IL332_00280 PF00072 Response regulator receiver domain IL332_00285 PF01627 Hpt domain IL332_00285 PF00072 Response regulator receiver domain IL332_00285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_00285 PF00512 His Kinase A (phospho-acceptor) domain IL332_00285 PF00497 Bacterial extracellular solute-binding proteins, family 3 IL332_00285 PF00989 PAS fold IL332_00295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_00295 PF06580 Histidine kinase IL332_00295 PF07694 5TMR of 5TMR-LYT IL332_00300 PF04397 LytTr DNA-binding domain IL332_00300 PF00072 Response regulator receiver domain IL332_00305 PF07690 Major Facilitator Superfamily IL332_00310 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IL332_00310 PF02222 ATP-grasp domain IL332_00315 PF00731 AIR carboxylase IL332_00320 PF00593 TonB dependent receptor IL332_00320 PF07715 TonB-dependent Receptor Plug Domain IL332_00325 PF01177 Asp/Glu/Hydantoin racemase IL332_00365 PF00899 ThiF family IL332_00370 PF02657 Fe-S metabolism associated domain IL332_00375 PF00266 Aminotransferase class-V IL332_00380 PF13361 UvrD-like helicase C-terminal domain IL332_00380 PF00580 UvrD/REP helicase N-terminal domain IL332_00385 PF00563 EAL domain IL332_00385 PF03707 Bacterial signalling protein N terminal repeat IL332_00385 PF00990 Diguanylate cyclase, GGDEF domain IL332_00390 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IL332_00395 PF08240 Alcohol dehydrogenase GroES-like domain IL332_00395 PF00107 Zinc-binding dehydrogenase IL332_00400 PF00155 Aminotransferase class I and II IL332_00405 PF08360 QacR-like protein, C-terminal region IL332_00405 PF00440 Bacterial regulatory proteins, tetR family IL332_00410 PF01370 NAD dependent epimerase/dehydratase family IL332_00425 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) IL332_00440 PF03611 PTS system sugar-specific permease component IL332_00450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IL332_00455 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IL332_00455 PF00356 Bacterial regulatory proteins, lacI family IL332_00470 PF03748 Flagellar basal body-associated protein FliL IL332_00475 PF04345 Chorismate lyase IL332_00480 PF01040 UbiA prenyltransferase family IL332_00485 PF01553 Acyltransferase IL332_00490 PF01726 LexA DNA binding domain IL332_00490 PF00717 Peptidase S24-like IL332_00500 PF02630 SCO1/SenC IL332_00505 PF01554 MatE IL332_00510 PF00588 SpoU rRNA Methylase family IL332_00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_00515 PF00512 His Kinase A (phospho-acceptor) domain IL332_00515 PF00672 HAMP domain IL332_00515 PF16527 Two-component sensor protein CpxA, periplasmic domain IL332_00520 PF00072 Response regulator receiver domain IL332_00520 PF00486 Transcriptional regulatory protein, C terminal IL332_00525 PF01545 Cation efflux family IL332_00525 PF16916 Dimerisation domain of Zinc Transporter IL332_00530 PF06426 Serine acetyltransferase, N-terminal IL332_00530 PF00132 Bacterial transferase hexapeptide (six repeats) IL332_00540 PF06005 Cell division protein ZapB IL332_00550 PF01367 5'-3' exonuclease, C-terminal SAM fold IL332_00550 PF01612 3'-5' exonuclease IL332_00550 PF00476 DNA polymerase family A IL332_00550 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IL332_00555 PF00132 Bacterial transferase hexapeptide (six repeats) IL332_00590 PF00356 Bacterial regulatory proteins, lacI family IL332_00595 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IL332_00595 PF00703 Glycosyl hydrolases family 2 IL332_00595 PF16353 Domain of unknown function(DUF4981) IL332_00595 PF02837 Glycosyl hydrolases family 2, sugar binding domain IL332_00595 PF02929 Beta galactosidase small chain IL332_00600 PF04074 YhcH/YjgK/YiaL IL332_00605 PF13520 Amino acid permease IL332_00610 PF01588 Putative tRNA binding domain IL332_00620 PF13593 SBF-like CPA transporter family (DUF4137) IL332_00640 PF00756 Putative esterase IL332_00645 PF00107 Zinc-binding dehydrogenase IL332_00645 PF08240 Alcohol dehydrogenase GroES-like domain IL332_00650 PF03466 LysR substrate binding domain IL332_00650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_00655 PF02653 Branched-chain amino acid transport system / permease component IL332_00660 PF02653 Branched-chain amino acid transport system / permease component IL332_00665 PF00005 ABC transporter IL332_00670 PF02608 ABC transporter substrate-binding protein PnrA-like IL332_00685 PF00580 UvrD/REP helicase N-terminal domain IL332_00685 PF13361 UvrD-like helicase C-terminal domain IL332_00705 PF03466 LysR substrate binding domain IL332_00705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_00720 PF14001 YdfZ protein IL332_00740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_00740 PF03466 LysR substrate binding domain IL332_00745 PF01810 LysE type translocator IL332_00750 PF06206 CpeT/CpcT family (DUF1001) IL332_00755 PF01810 LysE type translocator IL332_00760 PF12833 Helix-turn-helix domain IL332_00765 PF00892 EamA-like transporter family IL332_00775 PF00171 Aldehyde dehydrogenase family IL332_00780 PF07883 Cupin domain IL332_00780 PF01381 Helix-turn-helix IL332_00785 PF00202 Aminotransferase class-III IL332_00790 PF00171 Aldehyde dehydrogenase family IL332_00795 PF02540 NAD synthase IL332_00795 PF00958 GMP synthase C terminal domain IL332_00795 PF00117 Glutamine amidotransferase class-I IL332_00800 PF03466 LysR substrate binding domain IL332_00800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_00805 PF00294 pfkB family carbohydrate kinase IL332_00810 PF02082 Transcriptional regulator IL332_00825 PF02646 RmuC family IL332_00830 PF02386 Cation transport protein IL332_00835 PF02080 TrkA-C domain IL332_00835 PF02254 TrkA-N domain IL332_00840 PF01029 NusB family IL332_00840 PF01189 16S rRNA methyltransferase RsmB/F IL332_00845 PF02911 Formyl transferase, C-terminal domain IL332_00845 PF00551 Formyl transferase IL332_00850 PF01327 Polypeptide deformylase IL332_00860 PF02481 DNA recombination-mediator protein A IL332_00860 PF17782 DprA winged helix domain IL332_00865 PF04361 Protein of unknown function (DUF494) IL332_00870 PF01396 Topoisomerase DNA binding C4 zinc finger IL332_00875 PF01300 Telomere recombination IL332_00880 PF01218 Coproporphyrinogen III oxidase IL332_00885 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IL332_00885 PF01488 Shikimate / quinate 5-dehydrogenase IL332_00885 PF08501 Shikimate dehydrogenase substrate binding domain IL332_00890 PF01926 50S ribosome-binding GTPase IL332_00895 PF00034 Cytochrome c IL332_00900 PF04220 Der GTPase activator (YihI) IL332_00905 PF10675 Protein of unknown function (DUF2489) IL332_00910 PF04055 Radical SAM superfamily IL332_00910 PF06969 HemN C-terminal domain IL332_00915 PF00962 Adenosine/AMP deaminase IL332_00920 PF00072 Response regulator receiver domain IL332_00920 PF00158 Sigma-54 interaction domain IL332_00920 PF02954 Bacterial regulatory protein, Fis family IL332_00925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_00925 PF00512 His Kinase A (phospho-acceptor) domain IL332_00925 PF00989 PAS fold IL332_00935 PF00120 Glutamine synthetase, catalytic domain IL332_00935 PF03951 Glutamine synthetase, beta-Grasp domain IL332_00940 PF00679 Elongation factor G C-terminus IL332_00940 PF00009 Elongation factor Tu GTP binding domain IL332_00940 PF03144 Elongation factor Tu domain 2 IL332_00950 PF02580 D-Tyr-tRNA(Tyr) deacylase IL332_00960 PF00583 Acetyltransferase (GNAT) family IL332_00960 PF09500 Putative thioesterase (yiiD_Cterm) IL332_00970 PF17191 RecG wedge domain IL332_00970 PF00270 DEAD/DEAH box helicase IL332_00970 PF00271 Helicase conserved C-terminal domain IL332_00975 PF13091 PLD-like domain IL332_00980 PF02447 GntP family permease IL332_00985 PF01202 Shikimate kinase IL332_00990 PF00920 Dehydratase family IL332_00995 PF01081 KDPG and KHG aldolase IL332_01010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IL332_01010 PF00356 Bacterial regulatory proteins, lacI family IL332_01020 PF01551 Peptidase family M23 IL332_01025 PF01676 Metalloenzyme superfamily IL332_01025 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IL332_01030 PF00581 Rhodanese-like domain IL332_01035 PF02556 Preprotein translocase subunit SecB IL332_01040 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IL332_01040 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IL332_01045 PF01521 Iron-sulphur cluster biosynthesis IL332_01045 PF01106 NifU-like domain IL332_01050 PF00156 Phosphoribosyl transferase domain IL332_01055 PF00561 alpha/beta hydrolase fold IL332_01070 PF16921 Tex protein YqgF-like domain IL332_01070 PF09371 Tex-like protein N-terminal domain IL332_01070 PF00575 S1 RNA binding domain IL332_01070 PF17674 HHH domain IL332_01075 PF03449 Transcription elongation factor, N-terminal IL332_01075 PF01272 Transcription elongation factor, GreA/GreB, C-term IL332_01080 PF00072 Response regulator receiver domain IL332_01080 PF00486 Transcriptional regulatory protein, C terminal IL332_01085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_01085 PF00512 His Kinase A (phospho-acceptor) domain IL332_01085 PF00672 HAMP domain IL332_01095 PF00338 Ribosomal protein S10p/S20e IL332_01100 PF00297 Ribosomal protein L3 IL332_01105 PF00573 Ribosomal protein L4/L1 family IL332_01110 PF00276 Ribosomal protein L23 IL332_01115 PF03947 Ribosomal Proteins L2, C-terminal domain IL332_01115 PF00181 Ribosomal Proteins L2, RNA binding domain IL332_01120 PF00203 Ribosomal protein S19 IL332_01125 PF00237 Ribosomal protein L22p/L17e IL332_01130 PF07650 KH domain IL332_01130 PF00189 Ribosomal protein S3, C-terminal domain IL332_01135 PF00252 Ribosomal protein L16p/L10e IL332_01140 PF00831 Ribosomal L29 protein IL332_01145 PF00366 Ribosomal protein S17 IL332_01150 PF00238 Ribosomal protein L14p/L23e IL332_01155 PF00467 KOW motif IL332_01155 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IL332_01160 PF00673 ribosomal L5P family C-terminus IL332_01160 PF00281 Ribosomal protein L5 IL332_01165 PF00253 Ribosomal protein S14p/S29e IL332_01170 PF00410 Ribosomal protein S8 IL332_01175 PF00347 Ribosomal protein L6 IL332_01180 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IL332_01185 PF00333 Ribosomal protein S5, N-terminal domain IL332_01185 PF03719 Ribosomal protein S5, C-terminal domain IL332_01190 PF00327 Ribosomal protein L30p/L7e IL332_01195 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IL332_01200 PF00344 SecY translocase IL332_01205 PF00444 Ribosomal protein L36 IL332_01210 PF00416 Ribosomal protein S13/S18 IL332_01215 PF00411 Ribosomal protein S11 IL332_01220 PF01479 S4 domain IL332_01220 PF00163 Ribosomal protein S4/S9 N-terminal domain IL332_01225 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IL332_01225 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IL332_01225 PF01000 RNA polymerase Rpb3/RpoA insert domain IL332_01230 PF01196 Ribosomal protein L17 IL332_01275 PF00999 Sodium/hydrogen exchanger family IL332_01275 PF02254 TrkA-N domain IL332_01285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_01285 PF03466 LysR substrate binding domain IL332_01290 PF00106 short chain dehydrogenase IL332_01305 PF00326 Prolyl oligopeptidase family IL332_01305 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IL332_01310 PF16868 NMT1-like family IL332_01325 PF07947 YhhN family IL332_01330 PF07690 Major Facilitator Superfamily IL332_01335 PF13533 Biotin-lipoyl like IL332_01340 PF03466 LysR substrate binding domain IL332_01340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_01350 PF00375 Sodium:dicarboxylate symporter family IL332_01355 PF10678 Protein of unknown function (DUF2492) IL332_01360 PF01914 MarC family integral membrane protein IL332_01365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_01365 PF03466 LysR substrate binding domain IL332_01370 PF02416 mttA/Hcf106 family IL332_01380 PF01464 Transglycosylase SLT domain IL332_01380 PF00497 Bacterial extracellular solute-binding proteins, family 3 IL332_01390 PF13091 PLD-like domain IL332_01400 PF00440 Bacterial regulatory proteins, tetR family IL332_01405 PF07226 Protein of unknown function (DUF1422) IL332_01420 PF02881 SRP54-type protein, helical bundle domain IL332_01420 PF00448 SRP54-type protein, GTPase domain IL332_01425 PF00005 ABC transporter IL332_01430 PF18075 FtsX extracellular domain IL332_01435 PF04545 Sigma-70, region 4 IL332_01435 PF04542 Sigma-70 region 2 IL332_01435 PF00140 Sigma-70 factor, region 1.2 IL332_01440 PF00484 Carbonic anhydrase IL332_01445 PF00392 Bacterial regulatory proteins, gntR family IL332_01445 PF07702 UTRA domain IL332_01450 PF01979 Amidohydrolase family IL332_01455 PF00491 Arginase family IL332_01460 PF17392 Urocanase C-terminal domain IL332_01460 PF17391 Urocanase N-terminal domain IL332_01460 PF01175 Urocanase Rossmann-like domain IL332_01465 PF00221 Aromatic amino acid lyase IL332_01470 PF01699 Sodium/calcium exchanger protein IL332_01475 PF12792 CSS motif domain associated with EAL IL332_01475 PF00563 EAL domain IL332_01510 PF03958 Bacterial type II/III secretion system short domain IL332_01510 PF00263 Bacterial type II and III secretion system protein IL332_01525 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IL332_01525 PF00437 Type II/IV secretion system protein IL332_01530 PF00482 Type II secretion system (T2SS), protein F IL332_01545 PF07963 Prokaryotic N-terminal methylation motif IL332_01545 PF08334 Type II secretion system (T2SS), protein G IL332_01550 PF00114 Pilin (bacterial filament) IL332_01550 PF07963 Prokaryotic N-terminal methylation motif IL332_01580 PF04085 rod shape-determining protein MreC IL332_01585 PF04093 rod shape-determining protein MreD IL332_01590 PF02545 Maf-like protein IL332_01595 PF10150 Ribonuclease E/G family IL332_01595 PF00575 S1 RNA binding domain IL332_01600 PF13116 Protein of unknown function IL332_01600 PF13502 AsmA-like C-terminal region IL332_01605 PF00795 Carbon-nitrogen hydrolase IL332_01610 PF01523 Putative modulator of DNA gyrase IL332_01620 PF01914 MarC family integral membrane protein IL332_01625 PF07690 Major Facilitator Superfamily IL332_01635 PF04228 Putative neutral zinc metallopeptidase IL332_01655 PF00999 Sodium/hydrogen exchanger family IL332_01660 PF02574 Homocysteine S-methyltransferase IL332_01660 PF02310 B12 binding domain IL332_01660 PF02607 B12 binding domain IL332_01660 PF00809 Pterin binding enzyme IL332_01660 PF02965 Vitamin B12 dependent methionine synthase, activation domain IL332_01670 PF08443 RimK-like ATP-grasp domain IL332_01670 PF18030 RimK PreATP-grasp domain IL332_01680 PF00486 Transcriptional regulatory protein, C terminal IL332_01680 PF00072 Response regulator receiver domain IL332_01695 PF01964 Radical SAM ThiC family IL332_01695 PF13667 ThiC-associated domain IL332_01700 PF02581 Thiamine monophosphate synthase IL332_01705 PF00899 ThiF family IL332_01715 PF05690 Thiazole biosynthesis protein ThiG IL332_01720 PF04055 Radical SAM superfamily IL332_01720 PF06968 Biotin and Thiamin Synthesis associated domain IL332_01735 PF00132 Bacterial transferase hexapeptide (six repeats) IL332_01740 PF13036 Peptidoglycan-synthase activator LpoB IL332_01745 PF00990 Diguanylate cyclase, GGDEF domain IL332_01750 PF06055 Exopolysaccharide synthesis, ExoD IL332_01765 PF08803 Putative mono-oxygenase ydhR IL332_01770 PF01638 HxlR-like helix-turn-helix IL332_01785 PF07715 TonB-dependent Receptor Plug Domain IL332_01785 PF00593 TonB dependent receptor IL332_01795 PF08241 Methyltransferase domain IL332_01805 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IL332_01810 PF03692 Putative zinc- or iron-chelating domain IL332_01815 PF07219 HemY protein N-terminus IL332_01815 PF07719 Tetratricopeptide repeat IL332_01820 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase IL332_01825 PF02602 Uroporphyrinogen-III synthase HemD IL332_01830 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IL332_01830 PF03900 Porphobilinogen deaminase, C-terminal domain IL332_01835 PF12633 Adenylate cyclase NT domain IL332_01835 PF01295 Adenylate cyclase, class-I IL332_01840 PF02230 Phospholipase/Carboxylesterase IL332_01845 PF01491 Frataxin-like domain IL332_01855 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IL332_01855 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IL332_01860 PF01678 Diaminopimelate epimerase IL332_01870 PF00589 Phage integrase family IL332_01870 PF02899 Phage integrase, N-terminal SAM-like domain IL332_01875 PF13419 Haloacid dehalogenase-like hydrolase IL332_01885 PF07722 Peptidase C26 IL332_01900 PF04307 LexA-binding, inner membrane-associated putative hydrolase IL332_01905 PF00994 Probable molybdopterin binding domain IL332_01905 PF02464 Competence-damaged protein IL332_01915 PF04204 Homoserine O-succinyltransferase IL332_01925 PF01037 Lrp/AsnC ligand binding domain IL332_01930 PF00884 Sulfatase IL332_01940 PF16657 Maltogenic Amylase, C-terminal domain IL332_01940 PF00128 Alpha amylase, catalytic domain IL332_01940 PF02903 Alpha amylase, N-terminal ig-like domain IL332_01945 PF02308 MgtC family IL332_01965 PF00106 short chain dehydrogenase IL332_01980 PF00465 Iron-containing alcohol dehydrogenase IL332_01990 PF01053 Cys/Met metabolism PLP-dependent enzyme IL332_02000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IL332_02000 PF12793 Sugar transport-related sRNA regulator N-term IL332_02030 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IL332_02030 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IL332_02035 PF02698 DUF218 domain IL332_02045 PF00501 AMP-binding enzyme IL332_02045 PF13193 AMP-binding enzyme C-terminal domain IL332_02050 PF13378 Enolase C-terminal domain-like IL332_02055 PF00378 Enoyl-CoA hydratase/isomerase IL332_02060 PF12697 Alpha/beta hydrolase family IL332_02065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IL332_02065 PF16582 Middle domain of thiamine pyrophosphate IL332_02065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IL332_02070 PF00425 chorismate binding enzyme IL332_02075 PF01040 UbiA prenyltransferase family IL332_02095 PF00271 Helicase conserved C-terminal domain IL332_02095 PF00270 DEAD/DEAH box helicase IL332_02095 PF03880 DbpA RNA binding domain IL332_02100 PF07670 Nucleoside recognition IL332_02100 PF07662 Na+ dependent nucleoside transporter C-terminus IL332_02100 PF01773 Na+ dependent nucleoside transporter N-terminus IL332_02115 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IL332_02120 PF01544 CorA-like Mg2+ transporter protein IL332_02140 PF05068 Mannitol repressor IL332_02145 PF08125 Mannitol dehydrogenase C-terminal domain IL332_02145 PF01232 Mannitol dehydrogenase Rossmann domain IL332_02155 PF17876 Cold shock domain IL332_02155 PF00773 RNB domain IL332_02155 PF08206 Ribonuclease B OB domain IL332_02160 PF03466 LysR substrate binding domain IL332_02160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_02165 PF00765 Autoinducer synthase IL332_02170 PF03472 Autoinducer binding domain IL332_02170 PF00196 Bacterial regulatory proteins, luxR family IL332_02175 PF01810 LysE type translocator IL332_02180 PF02872 5'-nucleotidase, C-terminal domain IL332_02180 PF00149 Calcineurin-like phosphoesterase IL332_02185 PF03279 Bacterial lipid A biosynthesis acyltransferase IL332_02190 PF01467 Cytidylyltransferase-like IL332_02190 PF00294 pfkB family carbohydrate kinase IL332_02195 PF02321 Outer membrane efflux protein IL332_02200 PF00293 NUDIX domain IL332_02205 PF06853 Protein of unknown function (DUF1249) IL332_02210 PF00149 Calcineurin-like phosphoesterase IL332_02215 PF05728 Uncharacterised protein family (UPF0227) IL332_02220 PF00293 NUDIX domain IL332_02230 PF07869 Protein of unknown function (DUF1656) IL332_02235 PF00529 HlyD membrane-fusion protein of T1SS IL332_02235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL332_02240 PF04632 Fusaric acid resistance protein family IL332_02245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_02245 PF00204 DNA gyrase B IL332_02245 PF00986 DNA gyrase B subunit, carboxyl terminus IL332_02245 PF01751 Toprim domain IL332_02250 PF00521 DNA gyrase/topoisomerase IV, subunit A IL332_02250 PF03989 DNA gyrase C-terminal domain, beta-propeller IL332_02290 PF00226 DnaJ domain IL332_02290 PF00684 DnaJ central domain IL332_02290 PF01556 DnaJ C terminal domain IL332_02300 PF00578 AhpC/TSA family IL332_02320 PF01553 Acyltransferase IL332_02325 PF04012 PspA/IM30 family IL332_02340 PF01541 GIY-YIG catalytic domain IL332_02345 PF00892 EamA-like transporter family IL332_02350 PF03167 Uracil DNA glycosylase superfamily IL332_02360 PF03466 LysR substrate binding domain IL332_02360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_02365 PF00950 ABC 3 transport family IL332_02370 PF00005 ABC transporter IL332_02375 PF01297 Zinc-uptake complex component A periplasmic IL332_02395 PF01551 Peptidase family M23 IL332_02395 PF08525 Opacity-associated protein A N-terminal motif IL332_02395 PF01476 LysM domain IL332_02400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IL332_02405 PF04222 Protein of unknown function (DUF416) IL332_02420 PF02028 BCCT, betaine/carnitine/choline family transporter IL332_02425 PF00488 MutS domain V IL332_02425 PF05190 MutS family domain IV IL332_02425 PF05192 MutS domain III IL332_02425 PF05188 MutS domain II IL332_02425 PF01624 MutS domain I IL332_02435 PF02464 Competence-damaged protein IL332_02440 PF00154 recA bacterial DNA recombination protein IL332_02445 PF02631 RecX family IL332_02450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IL332_02450 PF01411 tRNA synthetases class II (A) IL332_02450 PF02272 DHHA1 domain IL332_02455 PF13840 ACT domain IL332_02455 PF01842 ACT domain IL332_02455 PF00696 Amino acid kinase family IL332_02460 PF02599 Global regulator protein family IL332_02495 PF00768 D-alanyl-D-alanine carboxypeptidase IL332_02500 PF09335 SNARE associated Golgi protein IL332_02505 PF01595 Cyclin M transmembrane N-terminal domain IL332_02505 PF00571 CBS domain IL332_02505 PF03471 Transporter associated domain IL332_02510 PF10458 Valyl tRNA synthetase tRNA binding arm IL332_02510 PF00133 tRNA synthetases class I (I, L, M and V) IL332_02510 PF08264 Anticodon-binding domain of tRNA IL332_02515 PF04364 DNA polymerase III chi subunit, HolC IL332_02520 PF00883 Cytosol aminopeptidase family, catalytic domain IL332_02520 PF02789 Cytosol aminopeptidase family, N-terminal domain IL332_02530 PF03739 Lipopolysaccharide export system permease LptF/LptG IL332_02550 PF00909 Ammonium Transporter Family IL332_02560 PF05958 tRNA (Uracil-5-)-methyltransferase IL332_02560 PF01938 TRAM domain IL332_02575 PF07963 Prokaryotic N-terminal methylation motif IL332_02580 PF01026 TatD related DNase IL332_02585 PF07670 Nucleoside recognition IL332_02585 PF01773 Na+ dependent nucleoside transporter N-terminus IL332_02585 PF07662 Na+ dependent nucleoside transporter C-terminus IL332_02595 PF01791 DeoC/LacD family aldolase IL332_02600 PF02885 Glycosyl transferase family, helical bundle domain IL332_02600 PF00591 Glycosyl transferase family, a/b domain IL332_02600 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IL332_02605 PF01676 Metalloenzyme superfamily IL332_02610 PF01048 Phosphorylase superfamily IL332_02615 PF05433 Glycine zipper 2TM domain IL332_02615 PF16998 17 kDa outer membrane surface antigen IL332_02620 PF13426 PAS domain IL332_02620 PF08447 PAS fold IL332_02620 PF05231 MASE1 IL332_02620 PF00990 Diguanylate cyclase, GGDEF domain IL332_02620 PF00563 EAL domain IL332_02620 PF08448 PAS fold IL332_02645 PF18073 Rubredoxin metal binding domain IL332_02655 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ IL332_02660 PF00216 Bacterial DNA-binding protein IL332_02675 PF01207 Dihydrouridine synthase (Dus) IL332_02680 PF01475 Ferric uptake regulator family IL332_02695 PF05525 Branched-chain amino acid transport protein IL332_02705 PF00271 Helicase conserved C-terminal domain IL332_02705 PF00270 DEAD/DEAH box helicase IL332_02710 PF03883 Peroxide stress protein YaaA IL332_02715 PF00437 Type II/IV secretion system protein IL332_02720 PF00437 Type II/IV secretion system protein IL332_02725 PF01168 Alanine racemase, N-terminal domain IL332_02730 PF14748 Pyrroline-5-carboxylate reductase dimerisation IL332_02730 PF03807 NADP oxidoreductase coenzyme F420-dependent IL332_02735 PF02325 YGGT family IL332_02740 PF02594 Uncharacterised ACR, YggU family COG1872 IL332_02760 PF06062 Uncharacterised protein family (UPF0231) IL332_02765 PF17853 GGDEF-like domain IL332_02765 PF05651 Putative sugar diacid recognition IL332_02765 PF13556 PucR C-terminal helix-turn-helix domain IL332_02770 PF02447 GntP family permease IL332_02775 PF02595 Glycerate kinase family IL332_02785 PF00255 Glutathione peroxidase IL332_02790 PF03466 LysR substrate binding domain IL332_02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_02795 PF01773 Na+ dependent nucleoside transporter N-terminus IL332_02795 PF07662 Na+ dependent nucleoside transporter C-terminus IL332_02795 PF07670 Nucleoside recognition IL332_02800 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IL332_02800 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IL332_02805 PF00472 RF-1 domain IL332_02810 PF00543 Nitrogen regulatory protein P-II IL332_02825 PF00005 ABC transporter IL332_02825 PF08402 TOBE domain IL332_02830 PF04261 Dyp-type peroxidase family IL332_02835 PF02863 Arginine repressor, C-terminal domain IL332_02835 PF01316 Arginine repressor, DNA binding domain IL332_02840 PF00005 ABC transporter IL332_02845 PF00497 Bacterial extracellular solute-binding proteins, family 3 IL332_02850 PF00528 Binding-protein-dependent transport system inner membrane component IL332_02855 PF00528 Binding-protein-dependent transport system inner membrane component IL332_02860 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IL332_02860 PF00056 lactate/malate dehydrogenase, NAD binding domain IL332_02865 PF08238 Sel1 repeat IL332_02870 PF00175 Oxidoreductase NAD-binding domain IL332_02870 PF00970 Oxidoreductase FAD-binding domain IL332_02870 PF00042 Globin IL332_02875 PF02082 Transcriptional regulator IL332_02880 PF01595 Cyclin M transmembrane N-terminal domain IL332_02880 PF03471 Transporter associated domain IL332_02880 PF00571 CBS domain IL332_02885 PF01578 Cytochrome C assembly protein IL332_02890 PF02881 SRP54-type protein, helical bundle domain IL332_02890 PF02978 Signal peptide binding domain IL332_02890 PF00448 SRP54-type protein, GTPase domain IL332_02895 PF00886 Ribosomal protein S16 IL332_02900 PF05239 PRC-barrel domain IL332_02900 PF01782 RimM N-terminal domain IL332_02905 PF01746 tRNA (Guanine-1)-methyltransferase IL332_02910 PF01245 Ribosomal protein L19 IL332_02920 PF02976 DNA mismatch repair enzyme MutH IL332_02925 PF00293 NUDIX domain IL332_02930 PF01590 GAF domain IL332_02930 PF00391 PEP-utilising enzyme, mobile domain IL332_02930 PF02896 PEP-utilising enzyme, TIM barrel domain IL332_02930 PF05524 PEP-utilising enzyme, N-terminal IL332_02935 PF01790 Prolipoprotein diacylglyceryl transferase IL332_02940 PF00303 Thymidylate synthase IL332_02945 PF06965 Na+/H+ antiporter 1 IL332_02955 PF03466 LysR substrate binding domain IL332_02955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_02960 PF01022 Bacterial regulatory protein, arsR family IL332_02965 PF01649 Ribosomal protein S20 IL332_02970 PF03023 Lipid II flippase MurJ IL332_02975 PF01687 Riboflavin kinase IL332_02975 PF06574 FAD synthetase IL332_02980 PF08264 Anticodon-binding domain of tRNA IL332_02980 PF00133 tRNA synthetases class I (I, L, M and V) IL332_02980 PF06827 Zinc finger found in FPG and IleRS IL332_02985 PF01252 Signal peptidase (SPase) II IL332_02990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IL332_02995 PF02401 LytB protein IL332_03000 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor IL332_03000 PF07963 Prokaryotic N-terminal methylation motif IL332_03035 PF00795 Carbon-nitrogen hydrolase IL332_03035 PF02540 NAD synthase IL332_03040 PF00543 Nitrogen regulatory protein P-II IL332_03045 PF02664 S-Ribosylhomocysteinase (LuxS) IL332_03050 PF00990 Diguanylate cyclase, GGDEF domain IL332_03055 PF17876 Cold shock domain IL332_03055 PF08461 Ribonuclease R winged-helix domain IL332_03055 PF08206 Ribonuclease B OB domain IL332_03055 PF00773 RNB domain IL332_03055 PF00575 S1 RNA binding domain IL332_03060 PF08032 RNA 2'-O ribose methyltransferase substrate binding IL332_03060 PF00588 SpoU rRNA Methylase family IL332_03070 PF13673 Acetyltransferase (GNAT) domain IL332_03080 PF01566 Natural resistance-associated macrophage protein IL332_03085 PF01250 Ribosomal protein S6 IL332_03090 PF01084 Ribosomal protein S18 IL332_03095 PF03948 Ribosomal protein L9, C-terminal domain IL332_03095 PF01281 Ribosomal protein L9, N-terminal domain IL332_03100 PF00970 Oxidoreductase FAD-binding domain IL332_03100 PF00175 Oxidoreductase NAD-binding domain IL332_03120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IL332_03130 PF16197 Ketoacyl-synthetase C-terminal extension IL332_03130 PF08990 Erythronolide synthase docking IL332_03130 PF08240 Alcohol dehydrogenase GroES-like domain IL332_03130 PF14765 Polyketide synthase dehydratase IL332_03130 PF08659 KR domain IL332_03130 PF02801 Beta-ketoacyl synthase, C-terminal domain IL332_03130 PF00698 Acyl transferase domain IL332_03130 PF00550 Phosphopantetheine attachment site IL332_03130 PF00109 Beta-ketoacyl synthase, N-terminal domain IL332_03135 PF09335 SNARE associated Golgi protein IL332_03145 PF04262 Glutamate-cysteine ligase IL332_03150 PF03605 Anaerobic c4-dicarboxylate membrane transporter IL332_03155 PF10415 Fumarase C C-terminus IL332_03155 PF00206 Lyase IL332_03160 PF04186 FxsA cytoplasmic membrane protein IL332_03165 PF01554 MatE IL332_03170 PF00166 Chaperonin 10 Kd subunit IL332_03175 PF00118 TCP-1/cpn60 chaperonin family IL332_03185 PF00563 EAL domain IL332_03185 PF00990 Diguanylate cyclase, GGDEF domain IL332_03185 PF03707 Bacterial signalling protein N terminal repeat IL332_03195 PF00849 RNA pseudouridylate synthase IL332_03200 PF00271 Helicase conserved C-terminal domain IL332_03200 PF12137 RNA polymerase recycling family C-terminal IL332_03200 PF18339 RapA N-terminal Tudor like domain 1 IL332_03200 PF00176 SNF2 family N-terminal domain IL332_03200 PF18337 RapA N-terminal Tudor like domain IL332_03250 PF00528 Binding-protein-dependent transport system inner membrane component IL332_03255 PF00528 Binding-protein-dependent transport system inner membrane component IL332_03260 PF00005 ABC transporter IL332_03260 PF12857 TOBE-like domain IL332_03265 PF03466 LysR substrate binding domain IL332_03265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_03270 PF18416 N-acetylglucosamine binding protein domain 2 IL332_03270 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading IL332_03275 PF17200 Single Cache domain 2 IL332_03275 PF00672 HAMP domain IL332_03275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_03300 PF11230 Protein of unknown function (DUF3029) IL332_03305 PF04055 Radical SAM superfamily IL332_03315 PF03466 LysR substrate binding domain IL332_03315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_03320 PF00155 Aminotransferase class I and II IL332_03325 PF11658 Cellulose biosynthesis protein BcsG IL332_03345 PF03170 Bacterial cellulose synthase subunit IL332_03350 PF01270 Glycosyl hydrolases family 8 IL332_03355 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) IL332_03365 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) IL332_03370 PF02583 Metal-sensitive transcriptional repressor IL332_03385 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IL332_03385 PF17967 Pullulanase N2 domain IL332_03385 PF18494 Pullulanase Ins domain IL332_03385 PF03714 Bacterial pullanase-associated domain IL332_03385 PF11852 Domain of unknown function (DUF3372) IL332_03390 PF00403 Heavy-metal-associated domain IL332_03395 PF08534 Redoxin IL332_03400 PF00270 DEAD/DEAH box helicase IL332_03400 PF00271 Helicase conserved C-terminal domain IL332_03405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_03405 PF08447 PAS fold IL332_03415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IL332_03425 PF10952 Protein of unknown function (DUF2753) IL332_03430 PF00378 Enoyl-CoA hydratase/isomerase IL332_03445 PF00106 short chain dehydrogenase IL332_03450 PF00929 Exonuclease IL332_03455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IL332_03455 PF04073 Aminoacyl-tRNA editing domain IL332_03455 PF03129 Anticodon binding domain IL332_03460 PF00672 HAMP domain IL332_03460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_03465 PF07499 RuvA, C-terminal domain IL332_03465 PF01330 RuvA N terminal domain IL332_03470 PF05491 RuvB C-terminal winged helix domain IL332_03470 PF17864 RuvB AAA lid domain IL332_03470 PF05496 Holliday junction DNA helicase RuvB P-loop domain IL332_03480 PF01654 Cytochrome bd terminal oxidase subunit I IL332_03485 PF02322 Cytochrome bd terminal oxidase subunit II IL332_03490 PF08173 Membrane bound YbgT-like protein IL332_03495 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) IL332_03500 PF03061 Thioesterase superfamily IL332_03505 PF01618 MotA/TolQ/ExbB proton channel family IL332_03510 PF02472 Biopolymer transport protein ExbD/TolR IL332_03520 PF07676 WD40-like Beta Propeller Repeat IL332_03520 PF04052 TolB amino-terminal domain IL332_03525 PF00691 OmpA family IL332_03530 PF13174 Tetratricopeptide repeat IL332_03530 PF16331 TolA binding protein trimerisation IL332_03605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_03605 PF00672 HAMP domain IL332_03610 PF02445 Quinolinate synthetase A protein IL332_03615 PF01263 Aldose 1-epimerase IL332_03620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IL332_03620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IL332_03625 PF02446 4-alpha-glucanotransferase IL332_03630 PF02806 Alpha amylase, C-terminal all-beta domain IL332_03630 PF00128 Alpha amylase, catalytic domain IL332_03630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IL332_03635 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IL332_03635 PF00128 Alpha amylase, catalytic domain IL332_03640 PF01641 SelR domain IL332_03655 PF00293 NUDIX domain IL332_03660 PF16884 N-terminal domain of oxidoreductase IL332_03660 PF00107 Zinc-binding dehydrogenase IL332_03665 PF01047 MarR family IL332_03680 PF01037 Lrp/AsnC ligand binding domain IL332_03690 PF07690 Major Facilitator Superfamily IL332_03710 PF00209 Sodium:neurotransmitter symporter family IL332_03730 PF00392 Bacterial regulatory proteins, gntR family IL332_03730 PF00155 Aminotransferase class I and II IL332_03745 PF01177 Asp/Glu/Hydantoin racemase IL332_03755 PF00501 AMP-binding enzyme IL332_03765 PF00583 Acetyltransferase (GNAT) family IL332_03775 PF17868 AAA lid domain IL332_03775 PF07728 AAA domain (dynein-related subfamily) IL332_03775 PF12592 Protein of unknown function (DUF3763) IL332_03785 PF00563 EAL domain IL332_03785 PF08448 PAS fold IL332_03785 PF00990 Diguanylate cyclase, GGDEF domain IL332_03790 PF00072 Response regulator receiver domain IL332_03790 PF00990 Diguanylate cyclase, GGDEF domain IL332_03795 PF16658 Class II release factor RF3, C-terminal domain IL332_03795 PF00009 Elongation factor Tu GTP binding domain IL332_03795 PF03144 Elongation factor Tu domain 2 IL332_03805 PF01758 Sodium Bile acid symporter family IL332_03810 PF00583 Acetyltransferase (GNAT) family IL332_03815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IL332_03825 PF03466 LysR substrate binding domain IL332_03825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_03830 PF04371 Porphyromonas-type peptidyl-arginine deiminase IL332_03835 PF01425 Amidase IL332_03840 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IL332_03875 PF12833 Helix-turn-helix domain IL332_03875 PF02311 AraC-like ligand binding domain IL332_03885 PF00270 DEAD/DEAH box helicase IL332_03885 PF00271 Helicase conserved C-terminal domain IL332_03890 PF00990 Diguanylate cyclase, GGDEF domain IL332_03895 PF05643 Putative bacterial lipoprotein (DUF799) IL332_03905 PF03783 Curli production assembly/transport component CsgG IL332_03925 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase IL332_03935 PF12704 MacB-like periplasmic core domain IL332_03935 PF02687 FtsX-like permease family IL332_03935 PF00005 ABC transporter IL332_03940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL332_03945 PF00072 Response regulator receiver domain IL332_03945 PF00486 Transcriptional regulatory protein, C terminal IL332_03955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_03955 PF16527 Two-component sensor protein CpxA, periplasmic domain IL332_03955 PF00672 HAMP domain IL332_03955 PF00512 His Kinase A (phospho-acceptor) domain IL332_03975 PF00445 Ribonuclease T2 family IL332_03980 PF03060 Nitronate monooxygenase IL332_04010 PF08343 Ribonucleotide reductase N-terminal IL332_04010 PF00317 Ribonucleotide reductase, all-alpha domain IL332_04010 PF02867 Ribonucleotide reductase, barrel domain IL332_04020 PF02562 PhoH-like protein IL332_04020 PF13638 PIN domain IL332_04030 PF00005 ABC transporter IL332_04035 PF00528 Binding-protein-dependent transport system inner membrane component IL332_04055 PF00694 Aconitase C-terminal domain IL332_04060 PF00330 Aconitase family (aconitate hydratase) IL332_04065 PF00180 Isocitrate/isopropylmalate dehydrogenase IL332_04070 PF00682 HMGL-like IL332_04070 PF08502 LeuA allosteric (dimerisation) domain IL332_04080 PF01569 PAP2 superfamily IL332_04095 PF00205 Thiamine pyrophosphate enzyme, central domain IL332_04095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IL332_04095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IL332_04100 PF10369 Small subunit of acetolactate synthase IL332_04105 PF01515 Phosphate acetyl/butaryl transferase IL332_04105 PF07085 DRTGG domain IL332_04110 PF00871 Acetokinase family IL332_04115 PF04217 Protein of unknown function, DUF412 IL332_04120 PF03887 YfbU domain IL332_04125 PF00578 AhpC/TSA family IL332_04130 PF01842 ACT domain IL332_04135 PF00701 Dihydrodipicolinate synthetase family IL332_04140 PF06804 NlpB/DapX lipoprotein IL332_04145 PF01259 SAICAR synthetase IL332_04155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_04155 PF03466 LysR substrate binding domain IL332_04160 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) IL332_04180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_04180 PF00072 Response regulator receiver domain IL332_04180 PF18415 Histidine kinase receptor ArcB trans-membrane domain IL332_04180 PF01627 Hpt domain IL332_04180 PF00512 His Kinase A (phospho-acceptor) domain IL332_04180 PF00989 PAS fold IL332_04195 PF09456 RcsC Alpha-Beta-Loop (ABL) IL332_04195 PF00512 His Kinase A (phospho-acceptor) domain IL332_04195 PF00072 Response regulator receiver domain IL332_04195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_04200 PF03707 Bacterial signalling protein N terminal repeat IL332_04200 PF00563 EAL domain IL332_04200 PF00990 Diguanylate cyclase, GGDEF domain IL332_04210 PF02357 Transcription termination factor nusG IL332_04215 PF03180 NLPA lipoprotein IL332_04220 PF00528 Binding-protein-dependent transport system inner membrane component IL332_04225 PF09383 NIL domain IL332_04225 PF00005 ABC transporter IL332_04235 PF00480 ROK family IL332_04240 PF08331 Domain of unknown function (DUF1730) IL332_04250 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IL332_04255 PF01520 N-acetylmuramoyl-L-alanine amidase IL332_04260 PF08676 MutL C terminal dimerisation domain IL332_04260 PF01119 DNA mismatch repair protein, C-terminal domain IL332_04270 PF17209 Hfq protein IL332_04280 PF01145 SPFH domain / Band 7 family IL332_04280 PF12221 Bacterial membrane protein N terminal IL332_04285 PF01145 SPFH domain / Band 7 family IL332_04290 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) IL332_04295 PF00348 Polyprenyl synthetase IL332_04300 PF00829 Ribosomal prokaryotic L21 protein IL332_04305 PF01016 Ribosomal L27 protein IL332_04310 PF01018 GTP1/OBG IL332_04310 PF01926 50S ribosome-binding GTPase IL332_04315 PF07670 Nucleoside recognition IL332_04325 PF00296 Luciferase-like monooxygenase IL332_04335 PF00149 Calcineurin-like phosphoesterase IL332_04340 PF04379 ApaG domain IL332_04345 PF00398 Ribosomal RNA adenine dimethylase IL332_04350 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IL332_04355 PF09312 SurA N-terminal domain IL332_04355 PF00639 PPIC-type PPIASE domain IL332_04365 PF01636 Phosphotransferase enzyme family IL332_04370 PF00483 Nucleotidyl transferase IL332_04375 PF05099 Tellurite resistance protein TerB IL332_04375 PF00226 DnaJ domain IL332_04380 PF00860 Permease family IL332_04390 PF12848 ABC transporter IL332_04390 PF00005 ABC transporter IL332_04395 PF01464 Transglycosylase SLT domain IL332_04400 PF00535 Glycosyl transferase family 2 IL332_04420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IL332_04420 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IL332_04420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IL332_04430 PF00005 ABC transporter IL332_04435 PF01032 FecCD transport family IL332_04445 PF06228 Haem utilisation ChuX/HutX IL332_04450 PF01243 Pyridoxamine 5'-phosphate oxidase IL332_04470 PF00593 TonB dependent receptor IL332_04470 PF07715 TonB-dependent Receptor Plug Domain IL332_04475 PF12832 MFS_1 like family IL332_04485 PF00704 Glycosyl hydrolases family 18 IL332_04485 PF08329 Chitinase A, N-terminal domain IL332_04490 PF13847 Methyltransferase domain IL332_04495 PF00027 Cyclic nucleotide-binding domain IL332_04495 PF13545 Crp-like helix-turn-helix domain IL332_04500 PF02566 OsmC-like protein IL332_04515 PF00485 Phosphoribulokinase / Uridine kinase family IL332_04520 PF06794 Uncharacterised protein family (UPF0270) IL332_04525 PF00563 EAL domain IL332_04525 PF01590 GAF domain IL332_04525 PF00360 Phytochrome region IL332_04525 PF00990 Diguanylate cyclase, GGDEF domain IL332_04530 PF00561 alpha/beta hydrolase fold IL332_04535 PF01584 CheW-like domain IL332_04535 PF00072 Response regulator receiver domain IL332_04545 PF09526 Probable metal-binding protein (DUF2387) IL332_04550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IL332_04555 PF04102 SlyX IL332_04565 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IL332_04565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IL332_04570 PF02954 Bacterial regulatory protein, Fis family IL332_04570 PF00158 Sigma-54 interaction domain IL332_04570 PF00072 Response regulator receiver domain IL332_04590 PF00149 Calcineurin-like phosphoesterase IL332_04590 PF02872 5'-nucleotidase, C-terminal domain IL332_04600 PF03796 DnaB-like helicase C terminal domain IL332_04600 PF00772 DnaB-like helicase N terminal domain IL332_04605 PF01168 Alanine racemase, N-terminal domain IL332_04605 PF00842 Alanine racemase, C-terminal domain IL332_04610 PF00171 Aldehyde dehydrogenase family IL332_04610 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IL332_04610 PF01619 Proline dehydrogenase IL332_04610 PF14850 DNA-binding domain of Proline dehydrogenase IL332_04620 PF10415 Fumarase C C-terminus IL332_04620 PF00206 Lyase IL332_04630 PF00529 HlyD membrane-fusion protein of T1SS IL332_04630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL332_04640 PF03575 Peptidase family S51 IL332_04645 PF00196 Bacterial regulatory proteins, luxR family IL332_04645 PF00072 Response regulator receiver domain IL332_04650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_04650 PF00989 PAS fold IL332_04650 PF00512 His Kinase A (phospho-acceptor) domain IL332_04655 PF13247 4Fe-4S dicluster domain IL332_04660 PF03916 Polysulphide reductase, NrfD IL332_04665 PF00384 Molybdopterin oxidoreductase IL332_04665 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IL332_04665 PF01568 Molydopterin dinucleotide binding domain IL332_04675 PF00989 PAS fold IL332_04675 PF01590 GAF domain IL332_04675 PF00990 Diguanylate cyclase, GGDEF domain IL332_04675 PF00563 EAL domain IL332_04700 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IL332_04700 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IL332_04705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_04705 PF03466 LysR substrate binding domain IL332_04710 PF01810 LysE type translocator IL332_04715 PF12392 Collagenase IL332_04715 PF01136 Peptidase family U32 IL332_04725 PF06906 Protein of unknown function (DUF1272) IL332_04735 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IL332_04735 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IL332_04740 PF12833 Helix-turn-helix domain IL332_04740 PF00730 HhH-GPD superfamily base excision DNA repair protein IL332_04740 PF06029 AlkA N-terminal domain IL332_04740 PF02805 Metal binding domain of Ada IL332_04745 PF02074 Carboxypeptidase Taq (M32) metallopeptidase IL332_04770 PF00106 short chain dehydrogenase IL332_04775 PF03573 outer membrane porin, OprD family IL332_04780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_04790 PF02447 GntP family permease IL332_04795 PF01370 NAD dependent epimerase/dehydratase family IL332_04800 PF01261 Xylose isomerase-like TIM barrel IL332_04805 PF00596 Class II Aldolase and Adducin N-terminal domain IL332_04810 PF17042 Nucleotide-binding C-terminal domain IL332_04810 PF07005 Sugar-binding N-terminal domain IL332_04815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IL332_04815 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IL332_04820 PF08220 DeoR-like helix-turn-helix domain IL332_04820 PF00455 DeoR C terminal sensor domain IL332_04835 PF03976 Polyphosphate kinase 2 (PPK2) IL332_04845 PF13181 Tetratricopeptide repeat IL332_04855 PF00664 ABC transporter transmembrane region IL332_04855 PF00005 ABC transporter IL332_04860 PF00529 HlyD membrane-fusion protein of T1SS IL332_04860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL332_04885 PF01817 Chorismate mutase type II IL332_04885 PF00800 Prephenate dehydratase IL332_04910 PF08349 Protein of unknown function (DUF1722) IL332_04915 PF13411 MerR HTH family regulatory protein IL332_04920 PF03441 FAD binding domain of DNA photolyase IL332_04920 PF00875 DNA photolyase IL332_04930 PF00106 short chain dehydrogenase IL332_04970 PF00210 Ferritin-like domain IL332_04975 PF03063 Prismane/CO dehydrogenase family IL332_04985 PF16363 GDP-mannose 4,6 dehydratase IL332_05000 PF00722 Glycosyl hydrolases family 16 IL332_05005 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit IL332_05010 PF00232 Glycosyl hydrolase family 1 IL332_05015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IL332_05015 PF02378 Phosphotransferase system, EIIC IL332_05020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IL332_05025 PF02018 Carbohydrate binding domain IL332_05025 PF02927 Cellulase N-terminal ig-like domain IL332_05025 PF00404 Dockerin type I domain IL332_05025 PF00759 Glycosyl hydrolase family 9 IL332_05030 PF14310 Fibronectin type III-like domain IL332_05030 PF00933 Glycosyl hydrolase family 3 N terminal domain IL332_05030 PF01915 Glycosyl hydrolase family 3 C-terminal domain IL332_05040 PF00672 HAMP domain IL332_05040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_05040 PF12729 Four helix bundle sensory module for signal transduction IL332_05045 PF13416 Bacterial extracellular solute-binding protein IL332_05050 PF00356 Bacterial regulatory proteins, lacI family IL332_05075 PF00873 AcrB/AcrD/AcrF family IL332_05080 PF00529 HlyD membrane-fusion protein of T1SS IL332_05080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL332_05085 PF00072 Response regulator receiver domain IL332_05085 PF00486 Transcriptional regulatory protein, C terminal IL332_05090 PF00512 His Kinase A (phospho-acceptor) domain IL332_05090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_05090 PF00672 HAMP domain IL332_05095 PF01740 STAS domain IL332_05095 PF00916 Sulfate permease family IL332_05100 PF03472 Autoinducer binding domain IL332_05100 PF00196 Bacterial regulatory proteins, luxR family IL332_05105 PF05638 Type VI secretion system effector, Hcp IL332_05115 PF04717 Type VI secretion system, phage-baseplate injector IL332_05120 PF13503 Domain of unknown function (DUF4123) IL332_05165 PF01965 DJ-1/PfpI family IL332_05170 PF08546 Ketopantoate reductase PanE/ApbA C terminal IL332_05170 PF02558 Ketopantoate reductase PanE/ApbA IL332_05175 PF04461 Protein of unknown function (DUF520) IL332_05180 PF03502 Nucleoside-specific channel-forming protein, Tsx IL332_05185 PF07690 Major Facilitator Superfamily IL332_05195 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IL332_05205 PF05175 Methyltransferase small domain IL332_05210 PF01722 BolA-like protein IL332_05215 PF11973 NQRA C-terminal domain IL332_05215 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) IL332_05220 PF03116 NQR2, RnfD, RnfE family IL332_05225 PF04205 FMN-binding domain IL332_05230 PF02508 Rnf-Nqr subunit, membrane protein IL332_05235 PF02508 Rnf-Nqr subunit, membrane protein IL332_05240 PF00111 2Fe-2S iron-sulfur cluster binding domain IL332_05240 PF00175 Oxidoreductase NAD-binding domain IL332_05240 PF00970 Oxidoreductase FAD-binding domain IL332_05245 PF02424 ApbE family IL332_05260 PF11798 IMS family HHH motif IL332_05260 PF11799 impB/mucB/samB family C-terminal domain IL332_05260 PF00817 impB/mucB/samB family IL332_05265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_05265 PF00672 HAMP domain IL332_05270 PF03466 LysR substrate binding domain IL332_05270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_05285 PF01728 FtsJ-like methyltransferase IL332_05285 PF18125 RlmM ferredoxin-like domain IL332_05295 PF00180 Isocitrate/isopropylmalate dehydrogenase IL332_05295 PF18324 Hypothetical protein TT1725 IL332_05300 PF01367 5'-3' exonuclease, C-terminal SAM fold IL332_05300 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IL332_05305 PF11892 Domain of unknown function (DUF3412) IL332_05305 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases IL332_05305 PF03641 Possible lysine decarboxylase IL332_05310 PF00990 Diguanylate cyclase, GGDEF domain IL332_05320 PF14489 QueF-like protein IL332_05320 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IL332_05325 PF07348 Syd protein (SUKH-2) IL332_05330 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) IL332_05355 PF04287 tRNA pseudouridine synthase C IL332_05360 PF00849 RNA pseudouridylate synthase IL332_05365 PF00258 Flavodoxin IL332_05375 PF02264 LamB porin IL332_05380 PF07148 Maltose operon periplasmic protein precursor (MalM) IL332_05385 PF02378 Phosphotransferase system, EIIC IL332_05385 PF00367 phosphotransferase system, EIIB IL332_05390 PF11944 Protein of unknown function (DUF3461) IL332_05395 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IL332_05395 PF14602 Hexapeptide repeat of succinyl-transferase IL332_05395 PF00132 Bacterial transferase hexapeptide (six repeats) IL332_05400 PF01842 ACT domain IL332_05400 PF01966 HD domain IL332_05400 PF01909 Nucleotidyltransferase domain IL332_05400 PF08335 GlnD PII-uridylyltransferase IL332_05405 PF00557 Metallopeptidase family M24 IL332_05410 PF00318 Ribosomal protein S2 IL332_05415 PF00889 Elongation factor TS IL332_05420 PF00696 Amino acid kinase family IL332_05425 PF01765 Ribosome recycling factor IL332_05430 PF01255 Putative undecaprenyl diphosphate synthase IL332_05440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IL332_05440 PF13288 DXP reductoisomerase C-terminal domain IL332_05440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IL332_05445 PF17820 PDZ domain IL332_05445 PF02163 Peptidase family M50 IL332_05450 PF07244 Surface antigen variable number repeat IL332_05450 PF01103 Surface antigen IL332_05455 PF03938 Outer membrane protein (OmpH-like) IL332_05460 PF00132 Bacterial transferase hexapeptide (six repeats) IL332_05460 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IL332_05465 PF07977 FabA-like domain IL332_05470 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IL332_05470 PF00132 Bacterial transferase hexapeptide (six repeats) IL332_05480 PF01351 Ribonuclease HII IL332_05485 PF01336 OB-fold nucleic acid binding domain IL332_05485 PF02811 PHP domain IL332_05485 PF07733 Bacterial DNA polymerase III alpha NTPase domain IL332_05485 PF14579 Helix-hairpin-helix motif IL332_05485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IL332_05490 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IL332_05500 PF03466 LysR substrate binding domain IL332_05500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_05510 PF13520 Amino acid permease IL332_05530 PF05649 Peptidase family M13 IL332_05530 PF01431 Peptidase family M13 IL332_05540 PF00990 Diguanylate cyclase, GGDEF domain IL332_05545 PF02254 TrkA-N domain IL332_05545 PF02080 TrkA-C domain IL332_05545 PF00999 Sodium/hydrogen exchanger family IL332_05590 PF00128 Alpha amylase, catalytic domain IL332_05605 PF00535 Glycosyl transferase family 2 IL332_05620 PF03734 L,D-transpeptidase catalytic domain IL332_05620 PF01471 Putative peptidoglycan binding domain IL332_05625 PF05951 Bacterial protein of unknown function (DUF882) IL332_05635 PF03458 UPF0126 domain IL332_05645 PF02463 RecF/RecN/SMC N terminal domain IL332_05645 PF06470 SMC proteins Flexible Hinge Domain IL332_05650 PF04354 ZipA, C-terminal FtsZ-binding domain IL332_05655 PF12826 Helix-hairpin-helix motif IL332_05655 PF00533 BRCA1 C Terminus (BRCT) domain IL332_05655 PF01653 NAD-dependent DNA ligase adenylation domain IL332_05655 PF03120 NAD-dependent DNA ligase OB-fold domain IL332_05655 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IL332_05665 PF03477 ATP cone domain IL332_05665 PF13597 Anaerobic ribonucleoside-triphosphate reductase IL332_05675 PF01679 Proteolipid membrane potential modulator IL332_05695 PF00529 HlyD membrane-fusion protein of T1SS IL332_05695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL332_05700 PF01047 MarR family IL332_05705 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IL332_05705 PF00989 PAS fold IL332_05705 PF17203 Single cache domain 3 IL332_05705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_05710 PF12431 Transcriptional regulator IL332_05710 PF00072 Response regulator receiver domain IL332_05715 PF00892 EamA-like transporter family IL332_05725 PF00171 Aldehyde dehydrogenase family IL332_05735 PF00990 Diguanylate cyclase, GGDEF domain IL332_05735 PF07694 5TMR of 5TMR-LYT IL332_05740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IL332_05745 PF00486 Transcriptional regulatory protein, C terminal IL332_05745 PF00072 Response regulator receiver domain IL332_05750 PF00989 PAS fold IL332_05750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_05750 PF11808 Phosphate regulon sensor protein PhoR IL332_05750 PF00512 His Kinase A (phospho-acceptor) domain IL332_05755 PF12849 PBP superfamily domain IL332_05760 PF01435 Peptidase family M48 IL332_05770 PF00480 ROK family IL332_05775 PF03932 CutC family IL332_05790 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IL332_05790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IL332_05795 PF00005 ABC transporter IL332_05800 PF00795 Carbon-nitrogen hydrolase IL332_05810 PF00497 Bacterial extracellular solute-binding proteins, family 3 IL332_05815 PF00528 Binding-protein-dependent transport system inner membrane component IL332_05820 PF00528 Binding-protein-dependent transport system inner membrane component IL332_05825 PF00005 ABC transporter IL332_05835 PF00293 NUDIX domain IL332_05840 PF08534 Redoxin IL332_05845 PF01699 Sodium/calcium exchanger protein IL332_05850 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IL332_05850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IL332_05865 PF00860 Permease family IL332_05870 PF00072 Response regulator receiver domain IL332_05870 PF00990 Diguanylate cyclase, GGDEF domain IL332_05875 PF10692 Protein of unknown function (DUF2498) IL332_05880 PF01554 MatE IL332_05885 PF12833 Helix-turn-helix domain IL332_05890 PF03949 Malic enzyme, NAD binding domain IL332_05890 PF00390 Malic enzyme, N-terminal domain IL332_05900 PF00691 OmpA family IL332_05900 PF01389 OmpA-like transmembrane domain IL332_05905 PF01389 OmpA-like transmembrane domain IL332_05905 PF00691 OmpA family IL332_05920 PF00209 Sodium:neurotransmitter symporter family IL332_05925 PF01734 Patatin-like phospholipase IL332_05930 PF17158 Membrane-associated sensor, integral membrane domain IL332_05930 PF00990 Diguanylate cyclase, GGDEF domain IL332_05940 PF00873 AcrB/AcrD/AcrF family IL332_05945 PF08497 Radical SAM N-terminal IL332_05945 PF11842 Domain of unknown function (DUF3362) IL332_05945 PF04055 Radical SAM superfamily IL332_05975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IL332_05980 PF02075 Crossover junction endodeoxyribonuclease RuvC IL332_05995 PF10145 Phage-related minor tail protein IL332_05995 PF01551 Peptidase family M23 IL332_05995 PF01464 Transglycosylase SLT domain IL332_06010 PF13091 PLD-like domain IL332_06010 PF13396 Phospholipase_D-nuclease N-terminal IL332_06020 PF00551 Formyl transferase IL332_06020 PF01842 ACT domain IL332_06025 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IL332_06040 PF01648 4'-phosphopantetheinyl transferase superfamily IL332_06045 PF00877 NlpC/P60 family IL332_06050 PF05971 RNA methyltransferase IL332_06055 PF01575 MaoC like domain IL332_06075 PF00512 His Kinase A (phospho-acceptor) domain IL332_06075 PF09308 LuxQ, periplasmic IL332_06075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_06075 PF00072 Response regulator receiver domain IL332_06095 PF10725 Protein of unknown function (DUF2517) IL332_06100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_06100 PF00072 Response regulator receiver domain IL332_06100 PF00497 Bacterial extracellular solute-binding proteins, family 3 IL332_06100 PF00989 PAS fold IL332_06100 PF01627 Hpt domain IL332_06100 PF00512 His Kinase A (phospho-acceptor) domain IL332_06105 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IL332_06110 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IL332_06110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IL332_06115 PF02690 Na+/Pi-cotransporter IL332_06125 PF13520 Amino acid permease IL332_06130 PF00324 Amino acid permease IL332_06140 PF00202 Aminotransferase class-III IL332_06145 PF00171 Aldehyde dehydrogenase family IL332_06150 PF07883 Cupin domain IL332_06150 PF01381 Helix-turn-helix IL332_06155 PF01266 FAD dependent oxidoreductase IL332_06185 PF02954 Bacterial regulatory protein, Fis family IL332_06185 PF00072 Response regulator receiver domain IL332_06185 PF00158 Sigma-54 interaction domain IL332_06190 PF02254 TrkA-N domain IL332_06190 PF00999 Sodium/hydrogen exchanger family IL332_06205 PF04381 Putative exonuclease, RdgC IL332_06210 PF00583 Acetyltransferase (GNAT) family IL332_06215 PF12320 Type 5 capsule protein repressor C-terminal domain IL332_06215 PF00149 Calcineurin-like phosphoesterase IL332_06225 PF01292 Prokaryotic cytochrome b561 IL332_06230 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IL332_06235 PF02896 PEP-utilising enzyme, TIM barrel domain IL332_06235 PF00391 PEP-utilising enzyme, mobile domain IL332_06235 PF05524 PEP-utilising enzyme, N-terminal IL332_06240 PF00381 PTS HPr component phosphorylation site IL332_06245 PF00291 Pyridoxal-phosphate dependent enzyme IL332_06250 PF06480 FtsH Extracellular IL332_06250 PF17862 AAA+ lid domain IL332_06250 PF01434 Peptidase family M41 IL332_06250 PF00004 ATPase family associated with various cellular activities (AAA) IL332_06260 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IL332_06260 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IL332_06265 PF18389 TrmO C-terminal domain IL332_06265 PF01980 tRNA-methyltransferase O IL332_06285 PF00664 ABC transporter transmembrane region IL332_06285 PF00005 ABC transporter IL332_06290 PF00664 ABC transporter transmembrane region IL332_06290 PF00005 ABC transporter IL332_06305 PF00072 Response regulator receiver domain IL332_06305 PF00486 Transcriptional regulatory protein, C terminal IL332_06315 PF03737 Aldolase/RraA IL332_06330 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) IL332_06335 PF00588 SpoU rRNA Methylase family IL332_06340 PF03447 Homoserine dehydrogenase, NAD binding domain IL332_06340 PF00742 Homoserine dehydrogenase IL332_06340 PF01842 ACT domain IL332_06340 PF00696 Amino acid kinase family IL332_06340 PF13840 ACT domain IL332_06345 PF00288 GHMP kinases N terminal domain IL332_06345 PF08544 GHMP kinases C terminal IL332_06350 PF14821 Threonine synthase N terminus IL332_06350 PF00291 Pyridoxal-phosphate dependent enzyme IL332_06380 PF02028 BCCT, betaine/carnitine/choline family transporter IL332_06390 PF05114 Protein of unknown function (DUF692) IL332_06410 PF13426 PAS domain IL332_06410 PF08447 PAS fold IL332_06410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_06425 PF04632 Fusaric acid resistance protein family IL332_06430 PF03205 Molybdopterin guanine dinucleotide synthesis protein B IL332_06435 PF12804 MobA-like NTP transferase domain IL332_06450 PF00860 Permease family IL332_06460 PF10282 Lactonase, 7-bladed beta-propeller IL332_06470 PF12794 Mechanosensitive ion channel inner membrane domain 1 IL332_06470 PF12795 Mechanosensitive ion channel porin domain IL332_06470 PF00924 Mechanosensitive ion channel IL332_06475 PF02887 Pyruvate kinase, alpha/beta domain IL332_06475 PF00224 Pyruvate kinase, barrel domain IL332_06480 PF08007 Cupin superfamily protein IL332_06485 PF00206 Lyase IL332_06485 PF08328 Adenylosuccinate lyase C-terminal IL332_06490 PF04356 Protein of unknown function (DUF489) IL332_06500 PF00293 NUDIX domain IL332_06505 PF00849 RNA pseudouridylate synthase IL332_06510 PF00583 Acetyltransferase (GNAT) family IL332_06545 PF00180 Isocitrate/isopropylmalate dehydrogenase IL332_06555 PF00291 Pyridoxal-phosphate dependent enzyme IL332_06560 PF03466 LysR substrate binding domain IL332_06560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_06565 PF00816 H-NS histone family IL332_06570 PF00793 DAHP synthetase I family IL332_06575 PF04954 Siderophore-interacting protein IL332_06575 PF08021 Siderophore-interacting FAD-binding domain IL332_06580 PF02321 Outer membrane efflux protein IL332_06585 PF02687 FtsX-like permease family IL332_06585 PF12704 MacB-like periplasmic core domain IL332_06585 PF00005 ABC transporter IL332_06590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL332_06600 PF02463 RecF/RecN/SMC N terminal domain IL332_06605 PF17158 Membrane-associated sensor, integral membrane domain IL332_06605 PF00990 Diguanylate cyclase, GGDEF domain IL332_06610 PF01513 ATP-NAD kinase IL332_06615 PF01025 GrpE IL332_06620 PF00012 Hsp70 protein IL332_06625 PF00684 DnaJ central domain IL332_06625 PF00226 DnaJ domain IL332_06625 PF01556 DnaJ C terminal domain IL332_06630 PF02264 LamB porin IL332_06630 PF11471 Maltoporin periplasmic N-terminal extension IL332_06635 PF00294 pfkB family carbohydrate kinase IL332_06640 PF02378 Phosphotransferase system, EIIC IL332_06640 PF00367 phosphotransferase system, EIIB IL332_06645 PF08244 Glycosyl hydrolases family 32 C terminal IL332_06645 PF00251 Glycosyl hydrolases family 32 N-terminal domain IL332_06650 PF00356 Bacterial regulatory proteins, lacI family IL332_06650 PF13407 Periplasmic binding protein domain IL332_06655 PF02308 MgtC family IL332_06665 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL332_06680 PF04143 Sulphur transport IL332_06700 PF00990 Diguanylate cyclase, GGDEF domain IL332_06700 PF00563 EAL domain IL332_06700 PF03707 Bacterial signalling protein N terminal repeat IL332_06725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL332_06725 PF00529 HlyD membrane-fusion protein of T1SS IL332_06735 PF03372 Endonuclease/Exonuclease/phosphatase family IL332_06745 PF00072 Response regulator receiver domain IL332_06750 PF00011 Hsp20/alpha crystallin family IL332_06755 PF02424 ApbE family IL332_06760 PF00127 Copper binding proteins, plastocyanin/azurin family IL332_06770 PF01047 MarR family IL332_06795 PF02627 Carboxymuconolactone decarboxylase family IL332_06800 PF06481 COX Aromatic Rich Motif IL332_06800 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IL332_06810 PF00510 Cytochrome c oxidase subunit III IL332_06815 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IL332_06820 PF01040 UbiA prenyltransferase family IL332_06835 PF07237 Protein of unknown function (DUF1428) IL332_06840 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IL332_06845 PF00528 Binding-protein-dependent transport system inner membrane component IL332_06850 PF00005 ABC transporter IL332_06855 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IL332_06910 PF00291 Pyridoxal-phosphate dependent enzyme IL332_06915 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IL332_06915 PF00218 Indole-3-glycerol phosphate synthase IL332_06920 PF00591 Glycosyl transferase family, a/b domain IL332_06920 PF02885 Glycosyl transferase family, helical bundle domain IL332_06925 PF00591 Glycosyl transferase family, a/b domain IL332_06925 PF02885 Glycosyl transferase family, helical bundle domain IL332_06925 PF00117 Glutamine amidotransferase class-I IL332_06930 PF04715 Anthranilate synthase component I, N terminal region IL332_06930 PF00425 chorismate binding enzyme IL332_06935 PF02811 PHP domain IL332_06940 PF01300 Telomere recombination IL332_06945 PF02616 Segregation and condensation protein ScpA IL332_06950 PF04079 Segregation and condensation complex subunit ScpB IL332_06955 PF00849 RNA pseudouridylate synthase IL332_06955 PF01479 S4 domain IL332_06975 PF00440 Bacterial regulatory proteins, tetR family IL332_06975 PF08361 MAATS-type transcriptional repressor, C-terminal region IL332_06980 PF00529 HlyD membrane-fusion protein of T1SS IL332_06980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL332_06985 PF00873 AcrB/AcrD/AcrF family IL332_06990 PF02321 Outer membrane efflux protein IL332_07045 PF00440 Bacterial regulatory proteins, tetR family IL332_07050 PF09317 Domain of unknown function (DUF1974) IL332_07050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IL332_07050 PF02770 Acyl-CoA dehydrogenase, middle domain IL332_07050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IL332_07055 PF00873 AcrB/AcrD/AcrF family IL332_07065 PF00224 Pyruvate kinase, barrel domain IL332_07065 PF02887 Pyruvate kinase, alpha/beta domain IL332_07070 PF01418 Helix-turn-helix domain, rpiR family IL332_07070 PF01380 SIS domain IL332_07075 PF02685 Glucokinase IL332_07080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_07085 PF00072 Response regulator receiver domain IL332_07085 PF00486 Transcriptional regulatory protein, C terminal IL332_07090 PF16363 GDP-mannose 4,6 dehydratase IL332_07095 PF04321 RmlD substrate binding domain IL332_07100 PF00483 Nucleotidyl transferase IL332_07105 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IL332_07115 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IL332_07120 PF00132 Bacterial transferase hexapeptide (six repeats) IL332_07125 PF01820 D-ala D-ala ligase N-terminus IL332_07125 PF07478 D-ala D-ala ligase C-terminus IL332_07130 PF00535 Glycosyl transferase family 2 IL332_07140 PF00535 Glycosyl transferase family 2 IL332_07145 PF13439 Glycosyltransferase Family 4 IL332_07145 PF00534 Glycosyl transferases group 1 IL332_07150 PF01370 NAD dependent epimerase/dehydratase family IL332_07155 PF02397 Bacterial sugar transferase IL332_07160 PF02719 Polysaccharide biosynthesis protein IL332_07170 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IL332_07175 PF02706 Chain length determinant protein IL332_07185 PF04337 Protein of unknown function, DUF480 IL332_07190 PF04434 SWIM zinc finger IL332_07190 PF00176 SNF2 family N-terminal domain IL332_07190 PF00271 Helicase conserved C-terminal domain IL332_07195 PF05472 DNA replication terminus site-binding protein (Ter protein) IL332_07205 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IL332_07210 PF00676 Dehydrogenase E1 component IL332_07215 PF02779 Transketolase, pyrimidine binding domain IL332_07215 PF02780 Transketolase, C-terminal domain IL332_07220 PF00364 Biotin-requiring enzyme IL332_07220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IL332_07220 PF02817 e3 binding domain IL332_07225 PF00313 'Cold-shock' DNA-binding domain IL332_07250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IL332_07265 PF01966 HD domain IL332_07270 PF01479 S4 domain IL332_07270 PF00849 RNA pseudouridylate synthase IL332_07280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IL332_07300 PF13144 Chaperone for flagella basal body P-ring formation IL332_07305 PF00072 Response regulator receiver domain IL332_07305 PF01584 CheW-like domain IL332_07310 PF01739 CheR methyltransferase, SAM binding domain IL332_07310 PF03705 CheR methyltransferase, all-alpha domain IL332_07315 PF00460 Flagella basal body rod protein IL332_07320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IL332_07320 PF00460 Flagella basal body rod protein IL332_07330 PF00460 Flagella basal body rod protein IL332_07330 PF07559 Flagellar basal body protein FlaE IL332_07330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IL332_07335 PF00460 Flagella basal body rod protein IL332_07335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IL332_07340 PF00460 Flagella basal body rod protein IL332_07340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IL332_07345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IL332_07345 PF00460 Flagella basal body rod protein IL332_07350 PF02107 Flagellar L-ring protein IL332_07360 PF10135 Rod binding protein IL332_07360 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IL332_07365 PF07196 Flagellin hook IN motif IL332_07365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IL332_07375 PF03448 MgtE intracellular N domain IL332_07375 PF00571 CBS domain IL332_07375 PF01769 Divalent cation transporter IL332_07380 PF02541 Ppx/GppA phosphatase family IL332_07385 PF13089 Polyphosphate kinase N-terminal domain IL332_07385 PF17941 Polyphosphate kinase C-terminal domain 1 IL332_07385 PF13090 Polyphosphate kinase C-terminal domain 2 IL332_07385 PF02503 Polyphosphate kinase middle domain IL332_07390 PF01842 ACT domain IL332_07405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_07405 PF13188 PAS domain IL332_07405 PF00512 His Kinase A (phospho-acceptor) domain IL332_07410 PF00158 Sigma-54 interaction domain IL332_07410 PF00072 Response regulator receiver domain IL332_07410 PF02954 Bacterial regulatory protein, Fis family IL332_07415 PF01784 NIF3 (NGG1p interacting factor 3) IL332_07420 PF00551 Formyl transferase IL332_07425 PF00586 AIR synthase related protein, N-terminal domain IL332_07425 PF02769 AIR synthase related protein, C-terminal domain IL332_07440 PF00308 Bacterial dnaA protein IL332_07445 PF00463 Isocitrate lyase family IL332_07450 PF01274 Malate synthase IL332_07465 PF14437 MafB19-like deaminase IL332_07470 PF00528 Binding-protein-dependent transport system inner membrane component IL332_07475 PF00528 Binding-protein-dependent transport system inner membrane component IL332_07480 PF00005 ABC transporter IL332_07485 PF01895 PhoU domain IL332_07490 PF01595 Cyclin M transmembrane N-terminal domain IL332_07490 PF03471 Transporter associated domain IL332_07490 PF00571 CBS domain IL332_07500 PF02310 B12 binding domain IL332_07500 PF02574 Homocysteine S-methyltransferase IL332_07500 PF00809 Pterin binding enzyme IL332_07500 PF02965 Vitamin B12 dependent methionine synthase, activation domain IL332_07500 PF02607 B12 binding domain IL332_07505 PF13520 Amino acid permease IL332_07510 PF04116 Fatty acid hydroxylase superfamily IL332_07515 PF00005 ABC transporter IL332_07520 PF00528 Binding-protein-dependent transport system inner membrane component IL332_07525 PF00497 Bacterial extracellular solute-binding proteins, family 3 IL332_07530 PF00990 Diguanylate cyclase, GGDEF domain IL332_07530 PF08448 PAS fold IL332_07535 PF01272 Transcription elongation factor, GreA/GreB, C-term IL332_07535 PF14760 Rnk N-terminus IL332_07550 PF00245 Alkaline phosphatase IL332_07555 PF00245 Alkaline phosphatase IL332_07560 PF01926 50S ribosome-binding GTPase IL332_07565 PF07690 Major Facilitator Superfamily IL332_07570 PF00850 Histone deacetylase domain IL332_07580 PF06733 DEAD_2 IL332_07580 PF13307 Helicase C-terminal domain IL332_07595 PF00155 Aminotransferase class I and II IL332_07600 PF05872 Bacterial protein of unknown function (DUF853) IL332_07615 PF00753 Metallo-beta-lactamase superfamily IL332_07615 PF03772 Competence protein IL332_07620 PF00005 ABC transporter IL332_07620 PF00664 ABC transporter transmembrane region IL332_07630 PF03966 Trm112p-like protein IL332_07635 PF02348 Cytidylyltransferase IL332_07640 PF00196 Bacterial regulatory proteins, luxR family IL332_07640 PF00072 Response regulator receiver domain IL332_07645 PF08459 UvrC Helix-hairpin-helix N-terminal IL332_07645 PF01541 GIY-YIG catalytic domain IL332_07645 PF02151 UvrB/uvrC motif IL332_07650 PF01066 CDP-alcohol phosphatidyltransferase IL332_07745 PF02511 Thymidylate synthase complementing protein IL332_07750 PF12826 Helix-hairpin-helix motif IL332_07750 PF00533 BRCA1 C Terminus (BRCT) domain IL332_07750 PF01653 NAD-dependent DNA ligase adenylation domain IL332_07750 PF03120 NAD-dependent DNA ligase OB-fold domain IL332_07750 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IL332_07755 PF13597 Anaerobic ribonucleoside-triphosphate reductase IL332_07755 PF03477 ATP cone domain IL332_07880 PF00589 Phage integrase family IL332_07890 PF08447 PAS fold IL332_07890 PF13426 PAS domain IL332_07890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_07895 PF08240 Alcohol dehydrogenase GroES-like domain IL332_07895 PF00107 Zinc-binding dehydrogenase IL332_07900 PF00440 Bacterial regulatory proteins, tetR family IL332_07900 PF16925 Tetracyclin repressor-like, C-terminal domain IL332_07905 PF04226 Transglycosylase associated protein IL332_07910 PF00149 Calcineurin-like phosphoesterase IL332_07920 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IL332_07925 PF09190 DALR domain IL332_07925 PF01406 tRNA synthetases class I (C) catalytic domain IL332_07990 PF01253 Translation initiation factor SUI1 IL332_08035 PF00793 DAHP synthetase I family IL332_08040 PF01219 Prokaryotic diacylglycerol kinase IL332_08045 PF01842 ACT domain IL332_08045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IL332_08045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IL332_08050 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IL332_08055 PF01812 5-formyltetrahydrofolate cyclo-ligase family IL332_08065 PF05173 Dihydrodipicolinate reductase, C-terminus IL332_08065 PF01113 Dihydrodipicolinate reductase, N-terminus IL332_08070 PF00117 Glutamine amidotransferase class-I IL332_08070 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IL332_08075 PF02142 MGS-like domain IL332_08075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IL332_08075 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IL332_08080 PF08502 LeuA allosteric (dimerisation) domain IL332_08080 PF00682 HMGL-like IL332_08085 PF00990 Diguanylate cyclase, GGDEF domain IL332_08090 PF07759 Protein of unknown function (DUF1615) IL332_08110 PF00271 Helicase conserved C-terminal domain IL332_08110 PF00270 DEAD/DEAH box helicase IL332_08120 PF14521 Lysine-specific metallo-endopeptidase IL332_08145 PF00497 Bacterial extracellular solute-binding proteins, family 3 IL332_08150 PF00528 Binding-protein-dependent transport system inner membrane component IL332_08155 PF00005 ABC transporter IL332_08160 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL332_08160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IL332_08165 PF01493 GXGXG motif IL332_08165 PF01645 Conserved region in glutamate synthase IL332_08165 PF00310 Glutamine amidotransferases class-II IL332_08165 PF04898 Glutamate synthase central domain IL332_08170 PF16199 Radical_SAM C-terminal domain IL332_08170 PF04055 Radical SAM superfamily IL332_08175 PF03412 Peptidase C39 family IL332_08175 PF00664 ABC transporter transmembrane region IL332_08175 PF00005 ABC transporter IL332_08245 PF00324 Amino acid permease IL332_08255 PF03618 Kinase/pyrophosphorylase IL332_08275 PF00990 Diguanylate cyclase, GGDEF domain IL332_08300 PF03180 NLPA lipoprotein IL332_08305 PF01569 PAP2 superfamily IL332_08310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IL332_08310 PF11890 Domain of unknown function (DUF3410) IL332_08310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IL332_08315 PF02774 Semialdehyde dehydrogenase, dimerisation domain IL332_08315 PF01118 Semialdehyde dehydrogenase, NAD binding domain IL332_08325 PF01416 tRNA pseudouridine synthase IL332_08330 PF01039 Carboxyl transferase domain IL332_08330 PF17848 Acetyl-coA carboxylase zinc finger domain IL332_08340 PF05036 Sporulation related domain IL332_08345 PF04358 DsrC like protein IL332_08350 PF12805 FUSC-like inner membrane protein yccS IL332_08355 PF01027 Inhibitor of apoptosis-promoting Bax1 IL332_08365 PF07660 Secretin and TonB N terminus short domain IL332_08365 PF07715 TonB-dependent Receptor Plug Domain IL332_08365 PF00593 TonB dependent receptor IL332_08375 PF04303 PrpF protein IL332_08380 PF00330 Aconitase family (aconitate hydratase) IL332_08380 PF00694 Aconitase C-terminal domain IL332_08385 PF00285 Citrate synthase, C-terminal domain IL332_08400 PF00990 Diguanylate cyclase, GGDEF domain IL332_08400 PF00563 EAL domain IL332_08400 PF13426 PAS domain IL332_08405 PF00849 RNA pseudouridylate synthase IL332_08415 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IL332_08420 PF04209 homogentisate 1,2-dioxygenase IL332_08430 PF02798 Glutathione S-transferase, N-terminal domain IL332_08430 PF14497 Glutathione S-transferase, C-terminal domain IL332_08445 PF13537 Glutamine amidotransferase domain IL332_08445 PF00733 Asparagine synthase IL332_08455 PF13344 Haloacid dehalogenase-like hydrolase IL332_08460 PF00962 Adenosine/AMP deaminase IL332_08465 PF00107 Zinc-binding dehydrogenase IL332_08465 PF08240 Alcohol dehydrogenase GroES-like domain IL332_08470 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IL332_08475 PF03471 Transporter associated domain IL332_08475 PF03741 Integral membrane protein TerC family IL332_08490 PF13183 4Fe-4S dicluster domain IL332_08490 PF01565 FAD binding domain IL332_08490 PF02913 FAD linked oxidases, C-terminal domain IL332_08500 PF03061 Thioesterase superfamily IL332_08505 PF00271 Helicase conserved C-terminal domain IL332_08505 PF00270 DEAD/DEAH box helicase IL332_08505 PF03880 DbpA RNA binding domain IL332_08515 PF00990 Diguanylate cyclase, GGDEF domain IL332_08515 PF08448 PAS fold IL332_08515 PF08447 PAS fold IL332_08515 PF00563 EAL domain IL332_08520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_08520 PF03466 LysR substrate binding domain IL332_08525 PF07690 Major Facilitator Superfamily IL332_08530 PF03553 Na+/H+ antiporter family IL332_08530 PF13726 Na+-H+ antiporter family IL332_08535 PF00929 Exonuclease IL332_08540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_08540 PF00672 HAMP domain IL332_08540 PF12729 Four helix bundle sensory module for signal transduction IL332_08545 PF00691 OmpA family IL332_08545 PF18393 MotY N-terminal domain IL332_08550 PF00459 Inositol monophosphatase family IL332_08560 PF02798 Glutathione S-transferase, N-terminal domain IL332_08560 PF00043 Glutathione S-transferase, C-terminal domain IL332_08565 PF02798 Glutathione S-transferase, N-terminal domain IL332_08565 PF00043 Glutathione S-transferase, C-terminal domain IL332_08575 PF00528 Binding-protein-dependent transport system inner membrane component IL332_08580 PF12911 N-terminal TM domain of oligopeptide transport permease C IL332_08580 PF00528 Binding-protein-dependent transport system inner membrane component IL332_08585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IL332_08585 PF00005 ABC transporter IL332_08600 PF05164 Cell division protein ZapA IL332_08605 PF03695 Uncharacterised protein family (UPF0149) IL332_08610 PF01494 FAD binding domain IL332_08615 PF01494 FAD binding domain IL332_08620 PF08669 Glycine cleavage T-protein C-terminal barrel domain IL332_08620 PF01571 Aminomethyltransferase folate-binding domain IL332_08625 PF01597 Glycine cleavage H-protein IL332_08630 PF02347 Glycine cleavage system P-protein IL332_08635 PF02384 N-6 DNA Methylase IL332_08635 PF12161 HsdM N-terminal domain IL332_08645 PF02810 SEC-C motif IL332_08645 PF03695 Uncharacterised protein family (UPF0149) IL332_08650 PF07728 AAA domain (dynein-related subfamily) IL332_08650 PF17868 AAA lid domain IL332_08650 PF12592 Protein of unknown function (DUF3763) IL332_08655 PF05762 VWA domain containing CoxE-like protein IL332_08660 PF11867 Domain of unknown function (DUF3387) IL332_08660 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IL332_08660 PF18766 SWI2/SNF2 ATPase IL332_08680 PF00665 Integrase core domain IL332_08710 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain IL332_08710 PF13538 UvrD-like helicase C-terminal domain IL332_08710 PF14490 Helix-hairpin-helix containing domain IL332_08750 PF07690 Major Facilitator Superfamily IL332_08755 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL332_08755 PF13192 Thioredoxin domain IL332_08760 PF10417 C-terminal domain of 1-Cys peroxiredoxin IL332_08760 PF00578 AhpC/TSA family IL332_08765 PF00571 CBS domain IL332_08770 PF02547 Queuosine biosynthesis protein IL332_08775 PF01702 Queuine tRNA-ribosyltransferase IL332_08780 PF02699 Preprotein translocase subunit IL332_08785 PF13721 SecD export protein N-terminal TM region IL332_08785 PF07549 SecD/SecF GG Motif IL332_08785 PF02355 Protein export membrane protein IL332_08795 PF00581 Rhodanese-like domain IL332_08800 PF13181 Tetratricopeptide repeat IL332_08800 PF07719 Tetratricopeptide repeat IL332_08805 PF01136 Peptidase family U32 IL332_08810 PF01136 Peptidase family U32 IL332_08815 PF02036 SCP-2 sterol transfer family IL332_08820 PF00588 SpoU rRNA Methylase family IL332_08825 PF02082 Transcriptional regulator IL332_08830 PF00266 Aminotransferase class-V IL332_08835 PF01592 NifU-like N terminal domain IL332_08840 PF01521 Iron-sulphur cluster biosynthesis IL332_08845 PF00226 DnaJ domain IL332_08845 PF07743 HSCB C-terminal oligomerisation domain IL332_08850 PF00012 Hsp70 protein IL332_08855 PF00111 2Fe-2S iron-sulfur cluster binding domain IL332_08860 PF12404 Peptidase IL332_08860 PF00883 Cytosol aminopeptidase family, catalytic domain IL332_08870 PF00334 Nucleoside diphosphate kinase IL332_08875 PF04055 Radical SAM superfamily IL332_08885 PF13464 Domain of unknown function (DUF4115) IL332_08895 PF03129 Anticodon binding domain IL332_08895 PF13393 Histidyl-tRNA synthetase IL332_08900 PF09976 Tetratricopeptide repeat-like domain IL332_08905 PF13360 PQQ-like domain IL332_08910 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IL332_08910 PF01926 50S ribosome-binding GTPase IL332_08915 PF07191 zinc-ribbons IL332_08920 PF00497 Bacterial extracellular solute-binding proteins, family 3 IL332_08920 PF01464 Transglycosylase SLT domain IL332_08930 PF00361 Proton-conducting membrane transporter IL332_08935 PF00361 Proton-conducting membrane transporter IL332_08945 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IL332_08950 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IL332_08955 PF12838 4Fe-4S dicluster domain IL332_08960 PF00146 NADH dehydrogenase IL332_08965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IL332_08965 PF00384 Molybdopterin oxidoreductase IL332_08965 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IL332_08970 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IL332_08970 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IL332_08980 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IL332_08980 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IL332_08985 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IL332_08990 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IL332_08995 PF13677 Membrane MotB of proton-channel complex MotA/MotB IL332_08995 PF00691 OmpA family IL332_09020 PF04536 TPM domain IL332_09040 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) IL332_09045 PF00248 Aldo/keto reductase family IL332_09060 PF01212 Beta-eliminating lyase IL332_09070 PF00486 Transcriptional regulatory protein, C terminal IL332_09070 PF00072 Response regulator receiver domain IL332_09075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_09075 PF03466 LysR substrate binding domain IL332_09085 PF13188 PAS domain IL332_09085 PF00563 EAL domain IL332_09085 PF03707 Bacterial signalling protein N terminal repeat IL332_09085 PF00990 Diguanylate cyclase, GGDEF domain IL332_09090 PF03806 AbgT putative transporter family IL332_09095 PF00881 Nitroreductase family IL332_09120 PF00925 GTP cyclohydrolase II IL332_09125 PF02224 Cytidylate kinase IL332_09130 PF00575 S1 RNA binding domain IL332_09135 PF00216 Bacterial DNA-binding protein IL332_09145 PF18073 Rubredoxin metal binding domain IL332_09150 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IL332_09165 PF06508 Queuosine biosynthesis protein QueC IL332_09170 PF04055 Radical SAM superfamily IL332_09175 PF12843 Putative quorum-sensing-regulated virulence factor IL332_09180 PF01923 Cobalamin adenosyltransferase IL332_09185 PF00816 H-NS histone family IL332_09190 PF03553 Na+/H+ antiporter family IL332_09195 PF00265 Thymidine kinase IL332_09205 PF10722 Putative bacterial sensory transduction regulator IL332_09215 PF00156 Phosphoribosyl transferase domain IL332_09230 PF08220 DeoR-like helix-turn-helix domain IL332_09230 PF00455 DeoR C terminal sensor domain IL332_09235 PF00141 Peroxidase IL332_09255 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IL332_09255 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IL332_09260 PF01053 Cys/Met metabolism PLP-dependent enzyme IL332_09270 PF13460 NAD(P)H-binding IL332_09275 PF03466 LysR substrate binding domain IL332_09275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_09280 PF12833 Helix-turn-helix domain IL332_09280 PF02311 AraC-like ligand binding domain IL332_09285 PF00563 EAL domain IL332_09285 PF12792 CSS motif domain associated with EAL IL332_09290 PF00990 Diguanylate cyclase, GGDEF domain IL332_09300 PF00593 TonB dependent receptor IL332_09300 PF07715 TonB-dependent Receptor Plug Domain IL332_09310 PF03466 LysR substrate binding domain IL332_09310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_09315 PF01717 Cobalamin-independent synthase, Catalytic domain IL332_09315 PF08267 Cobalamin-independent synthase, N-terminal domain IL332_09325 PF00571 CBS domain IL332_09325 PF01743 Poly A polymerase head domain IL332_09330 PF01266 FAD dependent oxidoreductase IL332_09335 PF04244 Deoxyribodipyrimidine photo-lyase-related protein IL332_09345 PF00768 D-alanyl-D-alanine carboxypeptidase IL332_09350 PF03918 Cytochrome C biogenesis protein IL332_09355 PF08534 Redoxin IL332_09365 PF03916 Polysulphide reductase, NrfD IL332_09370 PF13247 4Fe-4S dicluster domain IL332_09370 PF00037 4Fe-4S binding domain IL332_09375 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) IL332_09375 PF13435 Cytochrome c554 and c-prime IL332_09380 PF02335 Cytochrome c552 IL332_09400 PF02754 Cysteine-rich domain IL332_09400 PF13183 4Fe-4S dicluster domain IL332_09410 PF00890 FAD binding domain IL332_09415 PF04324 BFD-like [2Fe-2S] binding domain IL332_09415 PF01266 FAD dependent oxidoreductase IL332_09420 PF02810 SEC-C motif IL332_09425 PF00672 HAMP domain IL332_09425 PF17200 Single Cache domain 2 IL332_09425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_09430 PF00480 ROK family IL332_09430 PF01047 MarR family IL332_09435 PF00989 PAS fold IL332_09435 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IL332_09435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_09435 PF17203 Single cache domain 3 IL332_09440 PF00072 Response regulator receiver domain IL332_09445 PF01970 Tripartite tricarboxylate transporter TctA family IL332_09460 PF10145 Phage-related minor tail protein IL332_09460 PF01551 Peptidase family M23 IL332_09460 PF01464 Transglycosylase SLT domain IL332_09465 PF06826 Predicted Permease Membrane Region IL332_09465 PF02080 TrkA-C domain IL332_09475 PF12344 Ultra-violet resistance protein B IL332_09475 PF17757 UvrB interaction domain IL332_09475 PF04851 Type III restriction enzyme, res subunit IL332_09475 PF00271 Helicase conserved C-terminal domain IL332_09475 PF02151 UvrB/uvrC motif IL332_09485 PF09335 SNARE associated Golgi protein IL332_09490 PF02600 Disulfide bond formation protein DsbB IL332_09495 PF06450 Bacterial Na+/H+ antiporter B (NhaB) IL332_09500 PF07840 FadR C-terminal domain IL332_09500 PF00392 Bacterial regulatory proteins, gntR family IL332_09505 PF04293 SpoVR like protein IL332_09510 PF04285 Protein of unknown function (DUF444) IL332_09515 PF08298 PrkA AAA domain IL332_09515 PF06798 PrkA serine protein kinase C-terminal domain IL332_09520 PF00271 Helicase conserved C-terminal domain IL332_09520 PF00270 DEAD/DEAH box helicase IL332_09520 PF00570 HRDC domain IL332_09520 PF16124 RecQ zinc-binding IL332_09520 PF09382 RQC domain IL332_09525 PF00375 Sodium:dicarboxylate symporter family IL332_09530 PF03222 Tryptophan/tyrosine permease family IL332_09535 PF00293 NUDIX domain IL332_09540 PF00425 chorismate binding enzyme IL332_09540 PF04715 Anthranilate synthase component I, N terminal region IL332_09565 PF00343 Carbohydrate phosphorylase IL332_09575 PF00939 Sodium:sulfate symporter transmembrane region IL332_09590 PF00664 ABC transporter transmembrane region IL332_09590 PF00005 ABC transporter IL332_09595 PF00005 ABC transporter IL332_09595 PF00664 ABC transporter transmembrane region IL332_09625 PF01575 MaoC like domain IL332_09630 PF00561 alpha/beta hydrolase fold IL332_09630 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus IL332_09650 PF08543 Phosphomethylpyrimidine kinase IL332_09655 PF03992 Antibiotic biosynthesis monooxygenase IL332_09660 PF13673 Acetyltransferase (GNAT) domain IL332_09680 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IL332_09695 PF00270 DEAD/DEAH box helicase IL332_09695 PF00271 Helicase conserved C-terminal domain IL332_09710 PF07478 D-ala D-ala ligase C-terminus IL332_09710 PF01820 D-ala D-ala ligase N-terminus IL332_09715 PF03942 DTW domain IL332_09725 PF01925 Sulfite exporter TauE/SafE IL332_09730 PF03466 LysR substrate binding domain IL332_09730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_09785 PF02789 Cytosol aminopeptidase family, N-terminal domain IL332_09785 PF00883 Cytosol aminopeptidase family, catalytic domain IL332_09790 PF13419 Haloacid dehalogenase-like hydrolase IL332_09795 PF01546 Peptidase family M20/M25/M40 IL332_09795 PF07687 Peptidase dimerisation domain IL332_09800 PF00365 Phosphofructokinase IL332_09805 PF00121 Triosephosphate isomerase IL332_09810 PF02698 DUF218 domain IL332_09815 PF13847 Methyltransferase domain IL332_09820 PF17192 MukF middle domain IL332_09820 PF17193 MukF C-terminal domain IL332_09820 PF03882 MukF winged-helix domain IL332_09825 PF04288 MukE-like family IL332_09830 PF16330 MukB hinge domain IL332_09830 PF04310 MukB N-terminal IL332_09845 PF03330 Lytic transglycolase IL332_09865 PF03466 LysR substrate binding domain IL332_09865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_09870 PF01048 Phosphorylase superfamily IL332_09875 PF07662 Na+ dependent nucleoside transporter C-terminus IL332_09875 PF07670 Nucleoside recognition IL332_09875 PF01773 Na+ dependent nucleoside transporter N-terminus IL332_09880 PF01791 DeoC/LacD family aldolase IL332_09910 PF08274 PhnA Zinc-Ribbon IL332_09910 PF03831 PhnA domain IL332_09920 PF00704 Glycosyl hydrolases family 18 IL332_09920 PF08329 Chitinase A, N-terminal domain IL332_09945 PF01713 Smr domain IL332_09950 PF05175 Methyltransferase small domain IL332_09955 PF01264 Chorismate synthase IL332_09965 PF00270 DEAD/DEAH box helicase IL332_09965 PF00271 Helicase conserved C-terminal domain IL332_09980 PF03222 Tryptophan/tyrosine permease family IL332_09985 PF00356 Bacterial regulatory proteins, lacI family IL332_09985 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IL332_09990 PF00381 PTS HPr component phosphorylation site IL332_09990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IL332_09995 PF00294 pfkB family carbohydrate kinase IL332_10000 PF02378 Phosphotransferase system, EIIC IL332_10000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IL332_10005 PF06945 Protein of unknown function (DUF1289) IL332_10010 PF03562 MltA specific insert domain IL332_10010 PF06725 3D domain IL332_10015 PF00111 2Fe-2S iron-sulfur cluster binding domain IL332_10020 PF00268 Ribonucleotide reductase, small chain IL332_10025 PF03477 ATP cone domain IL332_10025 PF02867 Ribonucleotide reductase, barrel domain IL332_10025 PF00317 Ribonucleotide reductase, all-alpha domain IL332_10030 PF13419 Haloacid dehalogenase-like hydrolase IL332_10040 PF00521 DNA gyrase/topoisomerase IV, subunit A IL332_10040 PF03989 DNA gyrase C-terminal domain, beta-propeller IL332_10050 PF04055 Radical SAM superfamily IL332_10065 PF02824 TGS domain IL332_10065 PF03129 Anticodon binding domain IL332_10065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IL332_10065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IL332_10070 PF00707 Translation initiation factor IF-3, C-terminal domain IL332_10070 PF05198 Translation initiation factor IF-3, N-terminal domain IL332_10075 PF01632 Ribosomal protein L35 IL332_10080 PF00453 Ribosomal protein L20 IL332_10085 PF01409 tRNA synthetases class II core domain (F) IL332_10085 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IL332_10090 PF03147 Ferredoxin-fold anticodon binding domain IL332_10090 PF03483 B3/4 domain IL332_10090 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IL332_10090 PF01588 Putative tRNA binding domain IL332_10090 PF03484 tRNA synthetase B5 domain IL332_10095 PF00216 Bacterial DNA-binding protein IL332_10100 PF00072 Response regulator receiver domain IL332_10100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_10100 PF00512 His Kinase A (phospho-acceptor) domain IL332_10100 PF09456 RcsC Alpha-Beta-Loop (ABL) IL332_10115 PF02146 Sir2 family IL332_10130 PF00356 Bacterial regulatory proteins, lacI family IL332_10135 PF00294 pfkB family carbohydrate kinase IL332_10140 PF13407 Periplasmic binding protein domain IL332_10145 PF02653 Branched-chain amino acid transport system / permease component IL332_10150 PF00005 ABC transporter IL332_10155 PF05025 RbsD / FucU transport protein family IL332_10160 PF02798 Glutathione S-transferase, N-terminal domain IL332_10160 PF00043 Glutathione S-transferase, C-terminal domain IL332_10175 PF01171 PP-loop family IL332_10180 PF00582 Universal stress protein family IL332_10185 PF13545 Crp-like helix-turn-helix domain IL332_10185 PF00027 Cyclic nucleotide-binding domain IL332_10210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IL332_10210 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP IL332_10225 PF00115 Cytochrome C and Quinol oxidase polypeptide I IL332_10235 PF13185 GAF domain IL332_10240 PF04352 ProQ/FINO family IL332_10240 PF17516 ProQ C-terminal domain IL332_10245 PF11818 C-terminal domain of tail specific protease (DUF3340) IL332_10245 PF17804 Tail specific protease N-terminal domain IL332_10245 PF03572 Peptidase family S41 IL332_10245 PF00595 PDZ domain IL332_10250 PF01433 Peptidase family M1 domain IL332_10250 PF11940 Domain of unknown function (DUF3458) Ig-like fold IL332_10250 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IL332_10260 PF05088 Bacterial NAD-glutamate dehydrogenase IL332_10265 PF01180 Dihydroorotate dehydrogenase IL332_10270 PF07126 Cell-division protein ZapC IL332_10275 PF01170 Putative RNA methylase family UPF0020 IL332_10275 PF02926 THUMP domain IL332_10275 PF10672 S-adenosylmethionine-dependent methyltransferase IL332_10285 PF00005 ABC transporter IL332_10285 PF16326 ABC transporter C-terminal domain IL332_10285 PF12848 ABC transporter IL332_10295 PF04957 Ribosome modulation factor IL332_10300 PF07977 FabA-like domain IL332_10305 PF05362 Lon protease (S16) C-terminal proteolytic domain IL332_10305 PF13654 AAA domain IL332_10315 PF07130 YebG protein IL332_10325 PF04403 Paraquat-inducible protein A IL332_10330 PF02470 MlaD protein IL332_10335 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF IL332_10335 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF IL332_10335 PF01189 16S rRNA methyltransferase RsmB/F IL332_10345 PF00589 Phage integrase family IL332_10350 PF01026 TatD related DNase IL332_10355 PF09115 DNA polymerase III, delta subunit, C terminal IL332_10360 PF02223 Thymidylate kinase IL332_10365 PF02618 YceG-like family IL332_10370 PF01063 Amino-transferase class IV IL332_10375 PF02801 Beta-ketoacyl synthase, C-terminal domain IL332_10375 PF00109 Beta-ketoacyl synthase, N-terminal domain IL332_10380 PF00550 Phosphopantetheine attachment site IL332_10390 PF00698 Acyl transferase domain IL332_10395 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IL332_10395 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IL332_10400 PF02504 Fatty acid synthesis protein IL332_10405 PF01783 Ribosomal L32p protein family IL332_10410 PF02620 Large ribosomal RNA subunit accumulation protein YceD IL332_10420 PF02545 Maf-like protein IL332_10425 PF00849 RNA pseudouridylate synthase IL332_10425 PF01479 S4 domain IL332_10430 PF00575 S1 RNA binding domain IL332_10430 PF10150 Ribonuclease E/G family IL332_10430 PF12111 Polyribonucleotide phosphorylase C terminal IL332_10435 PF01384 Phosphate transporter family IL332_10440 PF00692 dUTPase IL332_10445 PF00485 Phosphoribulokinase / Uridine kinase family IL332_10450 PF10609 NUBPL iron-transfer P-loop NTPase IL332_10455 PF09334 tRNA synthetases class I (M) IL332_10455 PF08264 Anticodon-binding domain of tRNA IL332_10455 PF01588 Putative tRNA binding domain IL332_10460 PF00043 Glutathione S-transferase, C-terminal domain IL332_10460 PF02798 Glutathione S-transferase, N-terminal domain IL332_10465 PF00708 Acylphosphatase IL332_10470 PF12729 Four helix bundle sensory module for signal transduction IL332_10470 PF00672 HAMP domain IL332_10470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_10475 PF10672 S-adenosylmethionine-dependent methyltransferase IL332_10475 PF17785 PUA-like domain IL332_10500 PF02769 AIR synthase related protein, C-terminal domain IL332_10500 PF00586 AIR synthase related protein, N-terminal domain IL332_10510 PF00753 Metallo-beta-lactamase superfamily IL332_10515 PF00072 Response regulator receiver domain IL332_10525 PF01386 Ribosomal L25p family IL332_10535 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IL332_10535 PF11898 Domain of unknown function (DUF3418) IL332_10535 PF00271 Helicase conserved C-terminal domain IL332_10535 PF00270 DEAD/DEAH box helicase IL332_10535 PF04408 Helicase associated domain (HA2) IL332_10545 PF00072 Response regulator receiver domain IL332_10545 PF00196 Bacterial regulatory proteins, luxR family IL332_10550 PF07670 Nucleoside recognition IL332_10555 PF02678 Pirin IL332_10555 PF05726 Pirin C-terminal cupin domain IL332_10560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_10560 PF03466 LysR substrate binding domain IL332_10565 PF02575 YbaB/EbfC DNA-binding family IL332_10570 PF12169 DNA polymerase III subunits gamma and tau domain III IL332_10570 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IL332_10570 PF12170 DNA polymerase III tau subunit V interacting with alpha IL332_10580 PF04304 Protein of unknown function (DUF454) IL332_10585 PF01207 Dihydrouridine synthase (Dus) IL332_10595 PF00892 EamA-like transporter family IL332_10605 PF00570 HRDC domain IL332_10605 PF01612 3'-5' exonuclease IL332_10610 PF00501 AMP-binding enzyme IL332_10610 PF13193 AMP-binding enzyme C-terminal domain IL332_10615 PF00561 alpha/beta hydrolase fold IL332_10625 PF00814 Glycoprotease family IL332_10630 PF13307 Helicase C-terminal domain IL332_10630 PF04851 Type III restriction enzyme, res subunit IL332_10640 PF08029 HisG, C-terminal domain IL332_10640 PF01634 ATP phosphoribosyltransferase IL332_10645 PF00815 Histidinol dehydrogenase IL332_10650 PF00155 Aminotransferase class I and II IL332_10655 PF00475 Imidazoleglycerol-phosphate dehydratase IL332_10655 PF08645 Polynucleotide kinase 3 phosphatase IL332_10660 PF00117 Glutamine amidotransferase class-I IL332_10665 PF00977 Histidine biosynthesis protein IL332_10680 PF00072 Response regulator receiver domain IL332_10680 PF01627 Hpt domain IL332_10680 PF00512 His Kinase A (phospho-acceptor) domain IL332_10680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_10685 PF00977 Histidine biosynthesis protein IL332_10690 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IL332_10690 PF01502 Phosphoribosyl-AMP cyclohydrolase IL332_10700 PF08279 HTH domain IL332_10700 PF13280 WYL domain IL332_10705 PF00501 AMP-binding enzyme IL332_10705 PF13193 AMP-binding enzyme C-terminal domain IL332_10710 PF05433 Glycine zipper 2TM domain IL332_10725 PF01032 FecCD transport family IL332_10735 PF07690 Major Facilitator Superfamily IL332_10745 PF07152 YaeQ protein IL332_10755 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IL332_10755 PF00378 Enoyl-CoA hydratase/isomerase IL332_10755 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IL332_10760 PF02803 Thiolase, C-terminal domain IL332_10760 PF00108 Thiolase, N-terminal domain IL332_10765 PF17863 AAA lid domain IL332_10765 PF07726 ATPase family associated with various cellular activities (AAA) IL332_10770 PF01882 Protein of unknown function DUF58 IL332_10795 PF08281 Sigma-70, region 4 IL332_10795 PF04542 Sigma-70 region 2 IL332_10805 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IL332_10810 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IL332_10815 PF00563 EAL domain IL332_10815 PF08668 HDOD domain IL332_10825 PF09278 MerR, DNA binding IL332_10825 PF00376 MerR family regulatory protein IL332_10830 PF00375 Sodium:dicarboxylate symporter family IL332_10835 PF06865 Pyrimidine/purine nucleoside phosphorylase IL332_10840 PF03313 Serine dehydratase alpha chain IL332_10840 PF03315 Serine dehydratase beta chain IL332_10845 PF03313 Serine dehydratase alpha chain IL332_10845 PF03315 Serine dehydratase beta chain IL332_10850 PF13406 Transglycosylase SLT domain IL332_10855 PF05166 YcgL domain IL332_10860 PF05209 Septum formation inhibitor MinC, N-terminal domain IL332_10860 PF03775 Septum formation inhibitor MinC, C-terminal domain IL332_10865 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IL332_10870 PF03776 Septum formation topological specificity factor MinE IL332_10875 PF04269 Protein of unknown function, DUF440 IL332_10880 PF00912 Transglycosylase IL332_10885 PF04269 Protein of unknown function, DUF440 IL332_10895 PF17783 CvfB-like winged helix domain IL332_10895 PF13509 S1 domain IL332_10920 PF02525 Flavodoxin-like fold IL332_10925 PF00892 EamA-like transporter family IL332_10930 PF02222 ATP-grasp domain IL332_10930 PF01370 NAD dependent epimerase/dehydratase family IL332_10935 PF13419 Haloacid dehalogenase-like hydrolase IL332_10950 PF00677 Lumazine binding domain IL332_10955 PF06786 Uncharacterised protein family (UPF0253) IL332_10960 PF01554 MatE IL332_10990 PF00136 DNA polymerase family B IL332_10990 PF03104 DNA polymerase family B, exonuclease domain IL332_11005 PF03279 Bacterial lipid A biosynthesis acyltransferase IL332_11010 PF03279 Bacterial lipid A biosynthesis acyltransferase IL332_11020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_11020 PF03466 LysR substrate binding domain IL332_11025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IL332_11025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IL332_11030 PF01261 Xylose isomerase-like TIM barrel IL332_11035 PF00933 Glycosyl hydrolase family 3 N terminal domain IL332_11055 PF00232 Glycosyl hydrolase family 1 IL332_11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_11060 PF03466 LysR substrate binding domain IL332_11065 PF00990 Diguanylate cyclase, GGDEF domain IL332_11065 PF00072 Response regulator receiver domain IL332_11070 PF00384 Molybdopterin oxidoreductase IL332_11075 PF02634 FdhD/NarQ family IL332_11090 PF03466 LysR substrate binding domain IL332_11090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_11095 PF13407 Periplasmic binding protein domain IL332_11100 PF00005 ABC transporter IL332_11105 PF02653 Branched-chain amino acid transport system / permease component IL332_11115 PF12706 Beta-lactamase superfamily domain IL332_11120 PF01609 Transposase DDE domain IL332_11120 PF05598 Transposase domain (DUF772) IL332_11130 PF01925 Sulfite exporter TauE/SafE IL332_11135 PF13520 Amino acid permease IL332_11145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IL332_11145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IL332_11150 PF00378 Enoyl-CoA hydratase/isomerase IL332_11155 PF00378 Enoyl-CoA hydratase/isomerase IL332_11160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IL332_11160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IL332_11160 PF02770 Acyl-CoA dehydrogenase, middle domain IL332_11165 PF00171 Aldehyde dehydrogenase family IL332_11170 PF02770 Acyl-CoA dehydrogenase, middle domain IL332_11170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IL332_11170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IL332_11175 PF01039 Carboxyl transferase domain IL332_11180 PF00378 Enoyl-CoA hydratase/isomerase IL332_11190 PF00682 HMGL-like IL332_11195 PF00376 MerR family regulatory protein IL332_11195 PF09278 MerR, DNA binding IL332_11205 PF01184 GPR1/FUN34/yaaH family IL332_11210 PF06167 Glucose-regulated metallo-peptidase M90 IL332_11220 PF01235 Sodium:alanine symporter family IL332_11225 PF00378 Enoyl-CoA hydratase/isomerase IL332_11240 PF04341 Protein of unknown function, DUF485 IL332_11245 PF00474 Sodium:solute symporter family IL332_11250 PF12848 ABC transporter IL332_11250 PF00005 ABC transporter IL332_11255 PF13145 PPIC-type PPIASE domain IL332_11260 PF00216 Bacterial DNA-binding protein IL332_11265 PF00004 ATPase family associated with various cellular activities (AAA) IL332_11265 PF05362 Lon protease (S16) C-terminal proteolytic domain IL332_11265 PF02190 ATP-dependent protease La (LON) substrate-binding domain IL332_11270 PF07724 AAA domain (Cdc48 subfamily) IL332_11270 PF10431 C-terminal, D2-small domain, of ClpB protein IL332_11270 PF06689 ClpX C4-type zinc finger IL332_11275 PF00574 Clp protease IL332_11280 PF05697 Bacterial trigger factor protein (TF) IL332_11280 PF05698 Bacterial trigger factor protein (TF) C-terminus IL332_11280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IL332_11295 PF12704 MacB-like periplasmic core domain IL332_11295 PF02687 FtsX-like permease family IL332_11300 PF00005 ABC transporter IL332_11315 PF17757 UvrB interaction domain IL332_11315 PF03461 TRCF domain IL332_11315 PF02559 CarD-like/TRCF domain IL332_11315 PF00270 DEAD/DEAH box helicase IL332_11315 PF00271 Helicase conserved C-terminal domain IL332_11320 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IL332_11330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IL332_11335 PF00892 EamA-like transporter family IL332_11345 PF00300 Histidine phosphatase superfamily (branch 1) IL332_11350 PF16187 Middle or third domain of peptidase_M16 IL332_11350 PF00675 Insulinase (Peptidase family M16) IL332_11350 PF05193 Peptidase M16 inactive domain IL332_11355 PF05724 Thiopurine S-methyltransferase (TPMT) IL332_11385 PF12833 Helix-turn-helix domain IL332_11385 PF02805 Metal binding domain of Ada IL332_11385 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IL332_11385 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IL332_11395 PF02540 NAD synthase IL332_11395 PF00117 Glutamine amidotransferase class-I IL332_11395 PF00958 GMP synthase C terminal domain IL332_11400 PF00571 CBS domain IL332_11400 PF00478 IMP dehydrogenase / GMP reductase domain IL332_11420 PF01618 MotA/TolQ/ExbB proton channel family IL332_11425 PF02472 Biopolymer transport protein ExbD/TolR IL332_11435 PF13742 OB-fold nucleic acid binding domain IL332_11435 PF02601 Exonuclease VII, large subunit IL332_11440 PF04055 Radical SAM superfamily IL332_11445 PF00691 OmpA family IL332_11450 PF00990 Diguanylate cyclase, GGDEF domain IL332_11450 PF00563 EAL domain IL332_11450 PF03707 Bacterial signalling protein N terminal repeat IL332_11455 PF13689 YfiR/HmsC-like IL332_11460 PF18024 Helix-turn-helix domain IL332_11460 PF00158 Sigma-54 interaction domain IL332_11465 PF01329 Pterin 4 alpha carbinolamine dehydratase IL332_11470 PF00351 Biopterin-dependent aromatic amino acid hydroxylase IL332_11475 PF05128 Domain of unknown function (DUF697) IL332_11480 PF04317 YcjX-like family, DUF463 IL332_11490 PF06667 Phage shock protein B IL332_11495 PF04012 PspA/IM30 family IL332_11500 PF02954 Bacterial regulatory protein, Fis family IL332_11500 PF00158 Sigma-54 interaction domain IL332_11510 PF00528 Binding-protein-dependent transport system inner membrane component IL332_11515 PF00528 Binding-protein-dependent transport system inner membrane component IL332_11515 PF12911 N-terminal TM domain of oligopeptide transport permease C IL332_11520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IL332_11520 PF00005 ABC transporter IL332_11525 PF00005 ABC transporter IL332_11530 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) IL332_11535 PF00356 Bacterial regulatory proteins, lacI family IL332_11545 PF00232 Glycosyl hydrolase family 1 IL332_11550 PF00156 Phosphoribosyl transferase domain IL332_11555 PF02674 Colicin V production protein IL332_11560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IL332_11560 PF02403 Seryl-tRNA synthetase N-terminal domain IL332_11565 PF12002 MgsA AAA+ ATPase C terminal IL332_11565 PF16193 AAA C-terminal domain IL332_11565 PF00004 ATPase family associated with various cellular activities (AAA) IL332_11570 PF03548 Outer membrane lipoprotein carrier protein LolA IL332_11575 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IL332_11575 PF17854 FtsK alpha domain IL332_11575 PF01580 FtsK/SpoIIIE family IL332_11575 PF09397 Ftsk gamma domain IL332_11580 PF01037 Lrp/AsnC ligand binding domain IL332_11585 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IL332_11585 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IL332_11590 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL332_11595 PF05230 MASE2 domain IL332_11595 PF00990 Diguanylate cyclase, GGDEF domain IL332_11600 PF05433 Glycine zipper 2TM domain IL332_11605 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IL332_11615 PF01176 Translation initiation factor 1A / IF-1 IL332_11620 PF17871 AAA lid domain IL332_11620 PF07724 AAA domain (Cdc48 subfamily) IL332_11620 PF00004 ATPase family associated with various cellular activities (AAA) IL332_11620 PF02861 Clp amino terminal domain, pathogenicity island component IL332_11620 PF10431 C-terminal, D2-small domain, of ClpB protein IL332_11625 PF02617 ATP-dependent Clp protease adaptor protein ClpS IL332_11630 PF00313 'Cold-shock' DNA-binding domain IL332_11635 PF01118 Semialdehyde dehydrogenase, NAD binding domain IL332_11635 PF02774 Semialdehyde dehydrogenase, dimerisation domain IL332_11640 PF00893 Small Multidrug Resistance protein IL332_11650 PF18381 YcaO cyclodehydratase C-terminal domain IL332_11650 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding IL332_11655 PF01226 Formate/nitrite transporter IL332_11660 PF02901 Pyruvate formate lyase-like IL332_11660 PF01228 Glycine radical IL332_11665 PF03692 Putative zinc- or iron-chelating domain IL332_11680 PF02629 CoA binding domain IL332_11680 PF00549 CoA-ligase IL332_11685 PF00549 CoA-ligase IL332_11685 PF08442 ATP-grasp domain IL332_11690 PF00364 Biotin-requiring enzyme IL332_11690 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IL332_11690 PF02817 e3 binding domain IL332_11695 PF02779 Transketolase, pyrimidine binding domain IL332_11695 PF16870 2-oxoglutarate dehydrogenase C-terminal IL332_11695 PF00676 Dehydrogenase E1 component IL332_11695 PF16078 2-oxoglutarate dehydrogenase N-terminus IL332_11700 PF13085 2Fe-2S iron-sulfur cluster binding domain IL332_11705 PF02910 Fumarate reductase flavoprotein C-term IL332_11705 PF00890 FAD binding domain IL332_11710 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IL332_11715 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IL332_11720 PF00285 Citrate synthase, C-terminal domain IL332_11735 PF00109 Beta-ketoacyl synthase, N-terminal domain IL332_11735 PF02801 Beta-ketoacyl synthase, C-terminal domain IL332_11750 PF03606 C4-dicarboxylate anaerobic carrier IL332_11765 PF01863 Protein of unknown function DUF45 IL332_11780 PF01197 Ribosomal protein L31 IL332_11785 PF00444 Ribosomal protein L36 IL332_11790 PF02311 AraC-like ligand binding domain IL332_11790 PF12833 Helix-turn-helix domain IL332_11795 PF02653 Branched-chain amino acid transport system / permease component IL332_11800 PF00005 ABC transporter IL332_11805 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IL332_11810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IL332_11815 PF00596 Class II Aldolase and Adducin N-terminal domain IL332_11825 PF03466 LysR substrate binding domain IL332_11825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_11830 PF00155 Aminotransferase class I and II IL332_11835 PF00795 Carbon-nitrogen hydrolase IL332_11840 PF00497 Bacterial extracellular solute-binding proteins, family 3 IL332_11855 PF00149 Calcineurin-like phosphoesterase IL332_11885 PF13990 YjcZ-like protein IL332_11890 PF00350 Dynamin family IL332_11900 PF00224 Pyruvate kinase, barrel domain IL332_11900 PF02887 Pyruvate kinase, alpha/beta domain IL332_11905 PF07745 Glycosyl hydrolase family 53 IL332_11910 PF02378 Phosphotransferase system, EIIC IL332_11910 PF00367 phosphotransferase system, EIIB IL332_11915 PF02449 Beta-galactosidase IL332_11915 PF08532 Beta-galactosidase trimerisation domain IL332_11915 PF08533 Beta-galactosidase C-terminal domain IL332_11920 PF07745 Glycosyl hydrolase family 53 IL332_11925 PF00528 Binding-protein-dependent transport system inner membrane component IL332_11930 PF00528 Binding-protein-dependent transport system inner membrane component IL332_11935 PF13416 Bacterial extracellular solute-binding protein IL332_11940 PF00005 ABC transporter IL332_11940 PF17912 MalK OB fold domain IL332_11945 PF02743 Cache domain IL332_11945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_11945 PF00672 HAMP domain IL332_11955 PF07745 Glycosyl hydrolase family 53 IL332_11960 PF02264 LamB porin IL332_11965 PF00356 Bacterial regulatory proteins, lacI family IL332_11970 PF16363 GDP-mannose 4,6 dehydratase IL332_11975 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain IL332_11975 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain IL332_11980 PF10509 Galactokinase galactose-binding signature IL332_11980 PF08544 GHMP kinases C terminal IL332_11980 PF00288 GHMP kinases N terminal domain IL332_12035 PF08411 Exonuclease C-terminal IL332_12035 PF00929 Exonuclease IL332_12050 PF03788 LrgA family IL332_12055 PF04172 LrgB-like family IL332_12060 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region IL332_12060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IL332_12065 PF00501 AMP-binding enzyme IL332_12070 PF08891 YfcL protein IL332_12080 PF03741 Integral membrane protein TerC family IL332_12085 PF00793 DAHP synthetase I family IL332_12090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IL332_12095 PF00266 Aminotransferase class-V IL332_12100 PF01012 Electron transfer flavoprotein domain IL332_12100 PF00766 Electron transfer flavoprotein FAD-binding domain IL332_12105 PF01012 Electron transfer flavoprotein domain IL332_12115 PF01544 CorA-like Mg2+ transporter protein IL332_12120 PF11143 Protein of unknown function (DUF2919) IL332_12140 PF01032 FecCD transport family IL332_12145 PF01032 FecCD transport family IL332_12150 PF00005 ABC transporter IL332_12155 PF01648 4'-phosphopantetheinyl transferase superfamily IL332_12155 PF17837 4'-phosphopantetheinyl transferase N-terminal domain IL332_12160 PF01497 Periplasmic binding protein IL332_12165 PF00501 AMP-binding enzyme IL332_12165 PF00668 Condensation domain IL332_12165 PF16197 Ketoacyl-synthetase C-terminal extension IL332_12165 PF00109 Beta-ketoacyl synthase, N-terminal domain IL332_12165 PF13193 AMP-binding enzyme C-terminal domain IL332_12165 PF14765 Polyketide synthase dehydratase IL332_12165 PF00550 Phosphopantetheine attachment site IL332_12165 PF08659 KR domain IL332_12165 PF02801 Beta-ketoacyl synthase, C-terminal domain IL332_12170 PF13193 AMP-binding enzyme C-terminal domain IL332_12170 PF07993 Male sterility protein IL332_12170 PF00550 Phosphopantetheine attachment site IL332_12170 PF00501 AMP-binding enzyme IL332_12170 PF00668 Condensation domain IL332_12185 PF00550 Phosphopantetheine attachment site IL332_12185 PF00857 Isochorismatase family IL332_12190 PF00501 AMP-binding enzyme IL332_12190 PF13193 AMP-binding enzyme C-terminal domain IL332_12195 PF00425 chorismate binding enzyme IL332_12200 PF07273 Protein of unknown function (DUF1439) IL332_12210 PF00483 Nucleotidyl transferase IL332_12215 PF03707 Bacterial signalling protein N terminal repeat IL332_12215 PF00990 Diguanylate cyclase, GGDEF domain IL332_12215 PF00563 EAL domain IL332_12230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_12230 PF00672 HAMP domain IL332_12230 PF17200 Single Cache domain 2 IL332_12235 PF00294 pfkB family carbohydrate kinase IL332_12240 PF01124 MAPEG family IL332_12245 PF00762 Ferrochelatase IL332_12250 PF05191 Adenylate kinase, active site lid IL332_12255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_12255 PF00183 Hsp90 protein IL332_12260 PF02132 RecR protein IL332_12260 PF13662 Toprim domain IL332_12270 PF02705 K+ potassium transporter IL332_12275 PF00708 Acylphosphatase IL332_12275 PF01300 Telomere recombination IL332_12275 PF17788 HypF Kae1-like domain IL332_12275 PF07503 HypF finger IL332_12280 PF01455 HupF/HypC family IL332_12285 PF01924 Hydrogenase formation hypA family IL332_12290 PF02769 AIR synthase related protein, C-terminal domain IL332_12290 PF00586 AIR synthase related protein, N-terminal domain IL332_12295 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA IL332_12300 PF02492 CobW/HypB/UreG, nucleotide-binding domain IL332_12305 PF00005 ABC transporter IL332_12310 PF00005 ABC transporter IL332_12315 PF00528 Binding-protein-dependent transport system inner membrane component IL332_12315 PF12911 N-terminal TM domain of oligopeptide transport permease C IL332_12320 PF00528 Binding-protein-dependent transport system inner membrane component IL332_12325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IL332_12330 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE IL332_12335 PF01750 Hydrogenase maturation protease IL332_12340 PF00374 Nickel-dependent hydrogenase IL332_12345 PF03916 Polysulphide reductase, NrfD IL332_12350 PF13247 4Fe-4S dicluster domain IL332_12355 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IL332_12355 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal IL332_12365 PF13457 GW (Gly-Tryp) dipeptide domain IL332_12365 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IL332_12370 PF04717 Type VI secretion system, phage-baseplate injector IL332_12385 PF06744 Type VI secretion protein IcmF C-terminal IL332_12385 PF06761 Intracellular multiplication and human macrophage-killing IL332_12385 PF14331 ImcF-related N-terminal domain IL332_12400 PF02954 Bacterial regulatory protein, Fis family IL332_12400 PF00158 Sigma-54 interaction domain IL332_12405 PF00004 ATPase family associated with various cellular activities (AAA) IL332_12405 PF07724 AAA domain (Cdc48 subfamily) IL332_12405 PF10431 C-terminal, D2-small domain, of ClpB protein IL332_12405 PF17871 AAA lid domain IL332_12415 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE IL332_12435 PF05947 Type VI secretion system, TssF IL332_12445 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath IL332_12465 PF00665 Integrase core domain IL332_12475 PF03527 RHS protein IL332_12475 PF05593 RHS Repeat IL332_12485 PF04717 Type VI secretion system, phage-baseplate injector IL332_12490 PF05638 Type VI secretion system effector, Hcp IL332_12530 PF14403 Circularly permuted ATP-grasp type 2 IL332_12535 PF04168 A predicted alpha-helical domain with a conserved ER motif. IL332_12535 PF14403 Circularly permuted ATP-grasp type 2 IL332_12565 PF03239 Iron permease FTR1 family IL332_12570 PF01593 Flavin containing amine oxidoreductase IL332_12600 PF03600 Citrate transporter IL332_12615 PF12704 MacB-like periplasmic core domain IL332_12615 PF02687 FtsX-like permease family IL332_12635 PF05598 Transposase domain (DUF772) IL332_12635 PF01609 Transposase DDE domain IL332_12645 PF02913 FAD linked oxidases, C-terminal domain IL332_12645 PF01565 FAD binding domain IL332_12650 PF02589 LUD domain IL332_12655 PF13183 4Fe-4S dicluster domain IL332_12655 PF11870 Domain of unknown function (DUF3390) IL332_12655 PF02589 LUD domain IL332_12660 PF02754 Cysteine-rich domain IL332_12670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_12670 PF03466 LysR substrate binding domain IL332_12700 PF00696 Amino acid kinase family IL332_12700 PF00583 Acetyltransferase (GNAT) family IL332_12705 PF00696 Amino acid kinase family IL332_12705 PF01842 ACT domain IL332_12720 PF01906 Putative heavy-metal-binding IL332_12730 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL332_12735 PF05728 Uncharacterised protein family (UPF0227) IL332_12740 PF01432 Peptidase family M3 IL332_12740 PF08439 Oligopeptidase F IL332_12745 PF08439 Oligopeptidase F IL332_12745 PF01432 Peptidase family M3 IL332_12765 PF07549 SecD/SecF GG Motif IL332_12765 PF02355 Protein export membrane protein IL332_12770 PF02355 Protein export membrane protein IL332_12770 PF07549 SecD/SecF GG Motif IL332_12770 PF13721 SecD export protein N-terminal TM region IL332_12805 PF01230 HIT domain IL332_12810 PF00672 HAMP domain IL332_12810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_12820 PF01979 Amidohydrolase family IL332_12840 PF00375 Sodium:dicarboxylate symporter family IL332_12850 PF01168 Alanine racemase, N-terminal domain IL332_12850 PF00842 Alanine racemase, C-terminal domain IL332_12855 PF03741 Integral membrane protein TerC family IL332_12860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IL332_12860 PF00005 ABC transporter IL332_12865 PF00005 ABC transporter IL332_12865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IL332_12870 PF12911 N-terminal TM domain of oligopeptide transport permease C IL332_12870 PF00528 Binding-protein-dependent transport system inner membrane component IL332_12875 PF00528 Binding-protein-dependent transport system inner membrane component IL332_12880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IL332_12885 PF01914 MarC family integral membrane protein IL332_12890 PF00465 Iron-containing alcohol dehydrogenase IL332_12890 PF00171 Aldehyde dehydrogenase family IL332_12905 PF00072 Response regulator receiver domain IL332_12905 PF04397 LytTr DNA-binding domain IL332_12910 PF02554 Carbon starvation protein CstA IL332_12920 PF11742 Protein of unknown function (DUF3302) IL332_12925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL332_12925 PF00529 HlyD membrane-fusion protein of T1SS IL332_12930 PF04851 Type III restriction enzyme, res subunit IL332_12930 PF00271 Helicase conserved C-terminal domain IL332_12935 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IL332_12940 PF00462 Glutaredoxin IL332_12950 PF00155 Aminotransferase class I and II IL332_12955 PF03606 C4-dicarboxylate anaerobic carrier IL332_12960 PF12241 Trans-2-enoyl-CoA reductase catalytic region IL332_12960 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IL332_12960 PF07055 Enoyl reductase FAD binding domain IL332_12970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_12970 PF08447 PAS fold IL332_12970 PF13426 PAS domain IL332_12980 PF00892 EamA-like transporter family IL332_12985 PF02508 Rnf-Nqr subunit, membrane protein IL332_12990 PF04060 Putative Fe-S cluster IL332_12995 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IL332_12995 PF12838 4Fe-4S dicluster domain IL332_12995 PF13375 RnfC Barrel sandwich hybrid domain IL332_12995 PF10531 SLBB domain IL332_13000 PF03116 NQR2, RnfD, RnfE family IL332_13005 PF04205 FMN-binding domain IL332_13010 PF02508 Rnf-Nqr subunit, membrane protein IL332_13015 PF10576 Iron-sulfur binding domain of endonuclease III IL332_13015 PF00633 Helix-hairpin-helix motif IL332_13015 PF00730 HhH-GPD superfamily base excision DNA repair protein IL332_13020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IL332_13025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_13025 PF00672 HAMP domain IL332_13025 PF12729 Four helix bundle sensory module for signal transduction IL332_13030 PF02535 ZIP Zinc transporter IL332_13040 PF01048 Phosphorylase superfamily IL332_13050 PF01497 Periplasmic binding protein IL332_13055 PF02719 Polysaccharide biosynthesis protein IL332_13060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IL332_13065 PF01209 ubiE/COQ5 methyltransferase family IL332_13095 PF00535 Glycosyl transferase family 2 IL332_13105 PF03275 UDP-galactopyranose mutase IL332_13110 PF00535 Glycosyl transferase family 2 IL332_13125 PF13193 AMP-binding enzyme C-terminal domain IL332_13125 PF00501 AMP-binding enzyme IL332_13145 PF02348 Cytidylyltransferase IL332_13155 PF08666 SAF domain IL332_13155 PF03102 NeuB family IL332_13180 PF02561 Flagellar protein FliS IL332_13185 PF07195 Flagellar hook-associated protein 2 C-terminus IL332_13185 PF07196 Flagellin hook IN motif IL332_13185 PF02465 Flagellar hook-associated protein 2 N-terminus IL332_13195 PF00700 Bacterial flagellin C-terminal helical region IL332_13195 PF07196 Flagellin hook IN motif IL332_13195 PF00669 Bacterial flagellin N-terminal helical region IL332_13200 PF00669 Bacterial flagellin N-terminal helical region IL332_13200 PF00700 Bacterial flagellin C-terminal helical region IL332_13200 PF07196 Flagellin hook IN motif IL332_13205 PF03458 UPF0126 domain IL332_13215 PF02568 Thiamine biosynthesis protein (ThiI) IL332_13215 PF02926 THUMP domain IL332_13225 PF00905 Penicillin binding protein transpeptidase domain IL332_13225 PF00912 Transglycosylase IL332_13225 PF06832 Penicillin-Binding Protein C-terminus Family IL332_13230 PF11974 Bacterial alpha-2-macroglobulin MG3 domain IL332_13230 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain IL332_13230 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain IL332_13230 PF07703 Alpha-2-macroglobulin bait region domain IL332_13230 PF00207 Alpha-2-macroglobulin family IL332_13230 PF01835 MG2 domain IL332_13230 PF17962 Bacterial macroglobulin domain 6 IL332_13230 PF07678 A-macroglobulin TED domain IL332_13230 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain IL332_13235 PF01594 AI-2E family transporter IL332_13240 PF02321 Outer membrane efflux protein IL332_13245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL332_13245 PF00529 HlyD membrane-fusion protein of T1SS IL332_13260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IL332_13260 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL332_13265 PF00563 EAL domain IL332_13265 PF03707 Bacterial signalling protein N terminal repeat IL332_13265 PF00990 Diguanylate cyclase, GGDEF domain IL332_13270 PF04055 Radical SAM superfamily IL332_13280 PF00528 Binding-protein-dependent transport system inner membrane component IL332_13285 PF00528 Binding-protein-dependent transport system inner membrane component IL332_13290 PF00497 Bacterial extracellular solute-binding proteins, family 3 IL332_13300 PF03956 Lysine exporter LysO IL332_13305 PF01979 Amidohydrolase family IL332_13310 PF00497 Bacterial extracellular solute-binding proteins, family 3 IL332_13320 PF04336 Acyl carrier protein phosphodiesterase IL332_13335 PF03960 ArsC family IL332_13340 PF00578 AhpC/TSA family IL332_13345 PF13181 Tetratricopeptide repeat IL332_13345 PF01435 Peptidase family M48 IL332_13350 PF01206 Sulfurtransferase TusA IL332_13355 PF01594 AI-2E family transporter IL332_13365 PF00561 alpha/beta hydrolase fold IL332_13370 PF03976 Polyphosphate kinase 2 (PPK2) IL332_13375 PF08402 TOBE domain IL332_13375 PF00005 ABC transporter IL332_13380 PF00528 Binding-protein-dependent transport system inner membrane component IL332_13385 PF00528 Binding-protein-dependent transport system inner membrane component IL332_13385 PF14785 Maltose transport system permease protein MalF P2 domain IL332_13390 PF01547 Bacterial extracellular solute-binding protein IL332_13395 PF04245 37-kD nucleoid-associated bacterial protein IL332_13400 PF07208 Protein of unknown function (DUF1414) IL332_13405 PF11893 Domain of unknown function (DUF3413) IL332_13405 PF00884 Sulfatase IL332_13415 PF00326 Prolyl oligopeptidase family IL332_13415 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IL332_13435 PF03974 Ecotin IL332_13440 PF04219 Protein of unknown function, DUF IL332_13445 PF03466 LysR substrate binding domain IL332_13445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_13450 PF01817 Chorismate mutase type II IL332_13450 PF02153 Prephenate dehydrogenase IL332_13455 PF00793 DAHP synthetase I family IL332_13460 PF03009 Glycerophosphoryl diester phosphodiesterase family IL332_13465 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IL332_13465 PF01266 FAD dependent oxidoreductase IL332_13470 PF08220 DeoR-like helix-turn-helix domain IL332_13470 PF00455 DeoR C terminal sensor domain IL332_13475 PF07690 Major Facilitator Superfamily IL332_13480 PF00230 Major intrinsic protein IL332_13485 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IL332_13485 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IL332_13490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_13490 PF03466 LysR substrate binding domain IL332_13510 PF00248 Aldo/keto reductase family IL332_13515 PF07690 Major Facilitator Superfamily IL332_13525 PF02322 Cytochrome bd terminal oxidase subunit II IL332_13530 PF01654 Cytochrome bd terminal oxidase subunit I IL332_13535 PF00392 Bacterial regulatory proteins, gntR family IL332_13535 PF00155 Aminotransferase class I and II IL332_13545 PF04391 Protein of unknown function (DUF533) IL332_13555 PF10689 Protein of unknown function (DUF2496) IL332_13565 PF03466 LysR substrate binding domain IL332_13565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_13575 PF07690 Major Facilitator Superfamily IL332_13585 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IL332_13585 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IL332_13595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IL332_13605 PF00300 Histidine phosphatase superfamily (branch 1) IL332_13610 PF00563 EAL domain IL332_13610 PF03707 Bacterial signalling protein N terminal repeat IL332_13610 PF00990 Diguanylate cyclase, GGDEF domain IL332_13625 PF17810 Arginine decarboxylase helical bundle domain IL332_13625 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IL332_13625 PF17944 Arginine decarboxylase C-terminal helical extension IL332_13630 PF01546 Peptidase family M20/M25/M40 IL332_13630 PF07687 Peptidase dimerisation domain IL332_13645 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IL332_13645 PF05221 S-adenosyl-L-homocysteine hydrolase IL332_13655 PF04264 YceI-like domain IL332_13660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_13660 PF03466 LysR substrate binding domain IL332_13675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_13675 PF17200 Single Cache domain 2 IL332_13675 PF00672 HAMP domain IL332_13680 PF01227 GTP cyclohydrolase I IL332_13685 PF03453 MoeA N-terminal region (domain I and II) IL332_13685 PF03454 MoeA C-terminal region (domain IV) IL332_13685 PF00994 Probable molybdopterin binding domain IL332_13690 PF00899 ThiF family IL332_13700 PF06406 StbA protein IL332_13705 PF12697 Alpha/beta hydrolase family IL332_13715 PF00528 Binding-protein-dependent transport system inner membrane component IL332_13725 PF02391 MoaE protein IL332_13730 PF02597 ThiS family IL332_13735 PF01967 MoaC family IL332_13740 PF00994 Probable molybdopterin binding domain IL332_13745 PF03264 NapC/NirT cytochrome c family, N-terminal region IL332_13750 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) IL332_13755 PF12801 4Fe-4S binding domain IL332_13755 PF13237 4Fe-4S dicluster domain IL332_13760 PF12838 4Fe-4S dicluster domain IL332_13760 PF12800 4Fe-4S binding domain IL332_13765 PF10518 TAT (twin-arginine translocation) pathway signal sequence IL332_13765 PF01568 Molydopterin dinucleotide binding domain IL332_13765 PF00384 Molybdopterin oxidoreductase IL332_13765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IL332_13775 PF13187 4Fe-4S dicluster domain IL332_13775 PF12800 4Fe-4S binding domain IL332_13775 PF00037 4Fe-4S binding domain IL332_13780 PF04055 Radical SAM superfamily IL332_13780 PF06463 Molybdenum Cofactor Synthesis C IL332_13785 PF00672 HAMP domain IL332_13785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_13785 PF07730 Histidine kinase IL332_13785 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IL332_13790 PF00072 Response regulator receiver domain IL332_13790 PF00196 Bacterial regulatory proteins, luxR family IL332_13805 PF00072 Response regulator receiver domain IL332_13805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_13805 PF00512 His Kinase A (phospho-acceptor) domain IL332_13805 PF09456 RcsC Alpha-Beta-Loop (ABL) IL332_13815 PF01933 Uncharacterised protein family UPF0052 IL332_13825 PF13230 Glutamine amidotransferases class-II IL332_13830 PF13580 SIS domain IL332_13835 PF09317 Domain of unknown function (DUF1974) IL332_13835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IL332_13835 PF02770 Acyl-CoA dehydrogenase, middle domain IL332_13835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IL332_13840 PF11849 Domain of unknown function (DUF3369) IL332_13850 PF00929 Exonuclease IL332_13855 PF00075 RNase H IL332_13860 PF08241 Methyltransferase domain IL332_13865 PF16123 Hydroxyacylglutathione hydrolase C-terminus IL332_13865 PF00753 Metallo-beta-lactamase superfamily IL332_13870 PF01476 LysM domain IL332_13870 PF01464 Transglycosylase SLT domain IL332_13875 PF03372 Endonuclease/Exonuclease/phosphatase family IL332_13885 PF03061 Thioesterase superfamily IL332_13895 PF00356 Bacterial regulatory proteins, lacI family IL332_13900 PF14718 Soluble lytic murein transglycosylase L domain IL332_13900 PF01464 Transglycosylase SLT domain IL332_13910 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IL332_13930 PF04357 TamB, inner membrane protein subunit of TAM complex IL332_13935 PF17243 POTRA domain TamA domain 1 IL332_13935 PF07244 Surface antigen variable number repeat IL332_13935 PF01103 Surface antigen IL332_13955 PF02627 Carboxymuconolactone decarboxylase family IL332_13985 PF13406 Transglycosylase SLT domain IL332_13990 PF01047 MarR family IL332_14000 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IL332_14000 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IL332_14000 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IL332_14000 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IL332_14005 PF17206 SeqA protein N-terminal domain IL332_14005 PF03925 SeqA protein C-terminal domain IL332_14015 PF12697 Alpha/beta hydrolase family IL332_14025 PF01402 Ribbon-helix-helix protein, copG family IL332_14030 PF00258 Flavodoxin IL332_14040 PF01475 Ferric uptake regulator family IL332_14045 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IL332_14045 PF00749 tRNA synthetases class I (E and Q), catalytic domain IL332_14050 PF02838 Glycosyl hydrolase family 20, domain 2 IL332_14050 PF03173 Putative carbohydrate binding domain IL332_14050 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain IL332_14050 PF00728 Glycosyl hydrolase family 20, catalytic domain IL332_14055 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IL332_14055 PF00367 phosphotransferase system, EIIB IL332_14055 PF02378 Phosphotransferase system, EIIC IL332_14060 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IL332_14065 PF01979 Amidohydrolase family IL332_14070 PF00480 ROK family IL332_14070 PF01047 MarR family IL332_14075 PF08019 Phosphoethanolamine transferase EptA/EptB IL332_14075 PF00884 Sulfatase IL332_14080 PF01709 Transcriptional regulator IL332_14085 PF00152 tRNA synthetases class II (D, K and N) IL332_14085 PF02938 GAD domain IL332_14085 PF01336 OB-fold nucleic acid binding domain IL332_14090 PF01904 Protein of unknown function DUF72 IL332_14095 PF13649 Methyltransferase domain IL332_14100 PF08003 Protein of unknown function (DUF1698) IL332_14120 PF03466 LysR substrate binding domain IL332_14120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_14125 PF00877 NlpC/P60 family IL332_14135 PF00171 Aldehyde dehydrogenase family IL332_14140 PF08359 YsiA-like protein, C-terminal region IL332_14140 PF00440 Bacterial regulatory proteins, tetR family IL332_14150 PF00465 Iron-containing alcohol dehydrogenase IL332_14175 PF01554 MatE IL332_14185 PF04325 Protein of unknown function (DUF465) IL332_14190 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II IL332_14190 PF10371 Domain of unknown function IL332_14190 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase IL332_14190 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg IL332_14190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IL332_14195 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IL332_14195 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL332_14195 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IL332_14200 PF00111 2Fe-2S iron-sulfur cluster binding domain IL332_14200 PF03473 MOSC domain IL332_14200 PF00111 2Fe-2S iron-sulfur cluster binding domain IL332_14200 PF03476 MOSC N-terminal beta barrel domain IL332_14200 PF03476 MOSC N-terminal beta barrel domain IL332_14200 PF03473 MOSC domain IL332_14205 PF01435 Peptidase family M48 IL332_14215 PF08241 Methyltransferase domain IL332_14215 PF12697 Alpha/beta hydrolase family IL332_14220 PF00155 Aminotransferase class I and II IL332_14225 PF04055 Radical SAM superfamily IL332_14225 PF06968 Biotin and Thiamin Synthesis associated domain IL332_14230 PF00202 Aminotransferase class-III IL332_14245 PF01336 OB-fold nucleic acid binding domain IL332_14245 PF00152 tRNA synthetases class II (D, K and N) IL332_14250 PF03605 Anaerobic c4-dicarboxylate membrane transporter IL332_14260 PF01546 Peptidase family M20/M25/M40 IL332_14260 PF07687 Peptidase dimerisation domain IL332_14275 PF03960 ArsC family IL332_14280 PF07687 Peptidase dimerisation domain IL332_14280 PF01546 Peptidase family M20/M25/M40 IL332_14285 PF02557 D-alanyl-D-alanine carboxypeptidase IL332_14295 PF03471 Transporter associated domain IL332_14295 PF02080 TrkA-C domain IL332_14295 PF00999 Sodium/hydrogen exchanger family IL332_14305 PF01810 LysE type translocator IL332_14310 PF00672 HAMP domain IL332_14310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_14315 PF07509 Protein of unknown function (DUF1523) IL332_14330 PF01156 Inosine-uridine preferring nucleoside hydrolase IL332_14335 PF00849 RNA pseudouridylate synthase IL332_14340 PF01048 Phosphorylase superfamily IL332_14350 PF04355 SmpA / OmlA family IL332_14355 PF13460 NAD(P)H-binding IL332_14360 PF03658 RnfH family Ubiquitin IL332_14365 PF03364 Polyketide cyclase / dehydrase and lipid transport IL332_14370 PF01668 SmpB protein IL332_14390 PF13508 Acetyltransferase (GNAT) domain IL332_14410 PF01546 Peptidase family M20/M25/M40 IL332_14415 PF03466 LysR substrate binding domain IL332_14415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_14420 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IL332_14420 PF01243 Pyridoxamine 5'-phosphate oxidase IL332_14435 PF01189 16S rRNA methyltransferase RsmB/F IL332_14435 PF01029 NusB family IL332_14440 PF00462 Glutaredoxin IL332_14445 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IL332_14445 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IL332_14450 PF04333 MlaA lipoprotein IL332_14460 PF03918 Cytochrome C biogenesis protein IL332_14465 PF08534 Redoxin IL332_14470 PF01578 Cytochrome C assembly protein IL332_14470 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IL332_14475 PF03100 CcmE IL332_14480 PF04995 Heme exporter protein D (CcmD) IL332_14485 PF01578 Cytochrome C assembly protein IL332_14495 PF00005 ABC transporter IL332_14505 PF01584 CheW-like domain IL332_14520 PF13677 Membrane MotB of proton-channel complex MotA/MotB IL332_14520 PF00691 OmpA family IL332_14525 PF01618 MotA/TolQ/ExbB proton channel family IL332_14530 PF00072 Response regulator receiver domain IL332_14530 PF01339 CheB methylesterase IL332_14540 PF04344 Chemotaxis phosphatase, CheZ IL332_14545 PF00072 Response regulator receiver domain IL332_14550 PF04542 Sigma-70 region 2 IL332_14550 PF04545 Sigma-70, region 4 IL332_14550 PF04539 Sigma-70 region 3 IL332_14555 PF10609 NUBPL iron-transfer P-loop NTPase IL332_14560 PF00448 SRP54-type protein, GTPase domain IL332_14565 PF00771 FHIPEP family IL332_14570 PF01312 FlhB HrpN YscU SpaS Family IL332_14575 PF01311 Bacterial export proteins, family 1 IL332_14580 PF01313 Bacterial export proteins, family 3 IL332_14585 PF00813 FliP family IL332_14590 PF04347 Flagellar biosynthesis protein, FliO IL332_14595 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IL332_14600 PF02154 Flagellar motor switch protein FliM IL332_14600 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IL332_14620 PF18269 T3SS EscN ATPase C-terminal domain IL332_14620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IL332_14630 PF01706 FliG C-terminal domain IL332_14630 PF14841 FliG middle domain IL332_14630 PF14842 FliG N-terminal domain IL332_14635 PF08345 Flagellar M-ring protein C-terminal IL332_14635 PF01514 Secretory protein of YscJ/FliF family IL332_14640 PF02049 Flagellar hook-basal body complex protein FliE IL332_14655 PF03960 ArsC family IL332_14660 PF01758 Sodium Bile acid symporter family IL332_14665 PF01022 Bacterial regulatory protein, arsR family IL332_14670 PF00072 Response regulator receiver domain IL332_14675 PF00919 Uncharacterized protein family UPF0004 IL332_14675 PF18693 TRAM domain IL332_14675 PF04055 Radical SAM superfamily IL332_14680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IL332_14685 PF00528 Binding-protein-dependent transport system inner membrane component IL332_14690 PF00528 Binding-protein-dependent transport system inner membrane component IL332_14690 PF12911 N-terminal TM domain of oligopeptide transport permease C IL332_14695 PF00005 ABC transporter IL332_14695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IL332_14700 PF00005 ABC transporter IL332_14700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IL332_14710 PF01869 BadF/BadG/BcrA/BcrD ATPase family IL332_14715 PF00728 Glycosyl hydrolase family 20, catalytic domain IL332_14715 PF02838 Glycosyl hydrolase family 20, domain 2 IL332_14720 PF08447 PAS fold IL332_14720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_14735 PF01751 Toprim domain IL332_14735 PF01396 Topoisomerase DNA binding C4 zinc finger IL332_14735 PF01131 DNA topoisomerase IL332_14735 PF08272 Topoisomerase I zinc-ribbon-like IL332_14740 PF04996 Succinylarginine dihydrolase IL332_14745 PF01343 Peptidase family S49 IL332_14745 PF08496 Peptidase family S49 N-terminal IL332_14750 PF00106 short chain dehydrogenase IL332_14755 PF03466 LysR substrate binding domain IL332_14755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_14760 PF07690 Major Facilitator Superfamily IL332_14765 PF00155 Aminotransferase class I and II IL332_14775 PF03466 LysR substrate binding domain IL332_14775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_14780 PF00709 Adenylosuccinate synthetase IL332_14785 PF01161 Phosphatidylethanolamine-binding protein IL332_14795 PF01204 Trehalase IL332_14800 PF00579 tRNA synthetases class I (W and Y) IL332_14805 PF01476 LysM domain IL332_14805 PF01551 Peptidase family M23 IL332_14805 PF08525 Opacity-associated protein A N-terminal motif IL332_14810 PF03702 Anhydro-N-acetylmuramic acid kinase IL332_14825 PF01042 Endoribonuclease L-PSP IL332_14840 PF02780 Transketolase, C-terminal domain IL332_14840 PF02779 Transketolase, pyrimidine binding domain IL332_14840 PF00456 Transketolase, thiamine diphosphate binding domain IL332_14845 PF02772 S-adenosylmethionine synthetase, central domain IL332_14845 PF02773 S-adenosylmethionine synthetase, C-terminal domain IL332_14845 PF00438 S-adenosylmethionine synthetase, N-terminal domain IL332_14850 PF10263 SprT-like family IL332_14850 PF17283 SprT-like zinc ribbon domain IL332_14855 PF04231 Endonuclease I IL332_14860 PF04452 RNA methyltransferase IL332_14865 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IL332_14865 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IL332_14870 PF02622 Uncharacterized ACR, COG1678 IL332_14875 PF03652 Holliday junction resolvase IL332_14880 PF03466 LysR substrate binding domain IL332_14880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_14890 PF00144 Beta-lactamase IL332_14895 PF01235 Sodium:alanine symporter family IL332_14900 PF00923 Transaldolase/Fructose-6-phosphate aldolase IL332_14915 PF03167 Uracil DNA glycosylase superfamily IL332_14920 PF01228 Glycine radical IL332_14925 PF00375 Sodium:dicarboxylate symporter family IL332_14930 PF00793 DAHP synthetase I family IL332_14935 PF13369 Transglutaminase-like superfamily IL332_14945 PF17827 PrmC N-terminal domain IL332_14945 PF13847 Methyltransferase domain IL332_14950 PF00472 RF-1 domain IL332_14950 PF03462 PCRF domain IL332_14955 PF01488 Shikimate / quinate 5-dehydrogenase IL332_14955 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IL332_14955 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IL332_14960 PF03550 Outer membrane lipoprotein LolB IL332_14965 PF00288 GHMP kinases N terminal domain IL332_14965 PF08544 GHMP kinases C terminal IL332_14975 PF14572 Phosphoribosyl synthetase-associated domain IL332_14975 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IL332_14980 PF01195 Peptidyl-tRNA hydrolase IL332_14985 PF01926 50S ribosome-binding GTPase IL332_14985 PF06071 Protein of unknown function (DUF933) IL332_15030 PF02080 TrkA-C domain IL332_15030 PF03600 Citrate transporter IL332_15035 PF04266 ASCH domain IL332_15040 PF07859 alpha/beta hydrolase fold IL332_15055 PF13419 Haloacid dehalogenase-like hydrolase IL332_15070 PF00171 Aldehyde dehydrogenase family IL332_15075 PF04958 Arginine N-succinyltransferase beta subunit IL332_15080 PF00202 Aminotransferase class-III IL332_15085 PF00117 Glutamine amidotransferase class-I IL332_15095 PF00579 tRNA synthetases class I (W and Y) IL332_15100 PF13419 Haloacid dehalogenase-like hydrolase IL332_15105 PF00834 Ribulose-phosphate 3 epimerase family IL332_15110 PF02086 D12 class N6 adenine-specific DNA methyltransferase IL332_15120 PF01761 3-dehydroquinate synthase IL332_15125 PF01202 Shikimate kinase IL332_15130 PF07660 Secretin and TonB N terminus short domain IL332_15130 PF03958 Bacterial type II/III secretion system short domain IL332_15130 PF00263 Bacterial type II and III secretion system protein IL332_15130 PF11741 AMIN domain IL332_15140 PF04350 Pilus assembly protein, PilO IL332_15150 PF11104 Type IV pilus assembly protein PilM; IL332_15155 PF17092 Penicillin-binding protein OB-like domain IL332_15155 PF00912 Transglycosylase IL332_15155 PF00905 Penicillin binding protein transpeptidase domain IL332_15160 PF03466 LysR substrate binding domain IL332_15160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_15175 PF03466 LysR substrate binding domain IL332_15175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_15190 PF08525 Opacity-associated protein A N-terminal motif IL332_15190 PF01476 LysM domain IL332_15190 PF01551 Peptidase family M23 IL332_15200 PF12794 Mechanosensitive ion channel inner membrane domain 1 IL332_15200 PF12795 Mechanosensitive ion channel porin domain IL332_15200 PF00924 Mechanosensitive ion channel IL332_15205 PF03009 Glycerophosphoryl diester phosphodiesterase family IL332_15210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_15210 PF02743 Cache domain IL332_15210 PF00672 HAMP domain IL332_15215 PF00890 FAD binding domain IL332_15215 PF02910 Fumarate reductase flavoprotein C-term IL332_15220 PF13085 2Fe-2S iron-sulfur cluster binding domain IL332_15220 PF13183 4Fe-4S dicluster domain IL332_15225 PF02300 Fumarate reductase subunit C IL332_15230 PF02313 Fumarate reductase subunit D IL332_15245 PF06224 Winged helix DNA-binding domain IL332_15250 PF13847 Methyltransferase domain IL332_15260 PF00501 AMP-binding enzyme IL332_15270 PF00106 short chain dehydrogenase IL332_15280 PF00486 Transcriptional regulatory protein, C terminal IL332_15280 PF00072 Response regulator receiver domain IL332_15285 PF08521 Two-component sensor kinase N-terminal IL332_15285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_15285 PF00512 His Kinase A (phospho-acceptor) domain IL332_15290 PF18030 RimK PreATP-grasp domain IL332_15290 PF08443 RimK-like ATP-grasp domain IL332_15305 PF01132 Elongation factor P (EF-P) OB domain IL332_15305 PF08207 Elongation factor P (EF-P) KOW-like domain IL332_15305 PF09285 Elongation factor P, C-terminal IL332_15325 PF14226 non-haem dioxygenase in morphine synthesis N-terminal IL332_15325 PF03171 2OG-Fe(II) oxygenase superfamily IL332_15335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IL332_15335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IL332_15345 PF17152 Periplasmic sensor domain IL332_15345 PF00990 Diguanylate cyclase, GGDEF domain IL332_15355 PF00990 Diguanylate cyclase, GGDEF domain IL332_15360 PF13419 Haloacid dehalogenase-like hydrolase IL332_15370 PF03466 LysR substrate binding domain IL332_15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_15375 PF00857 Isochorismatase family IL332_15380 PF01494 FAD binding domain IL332_15385 PF00919 Uncharacterized protein family UPF0004 IL332_15385 PF04055 Radical SAM superfamily IL332_15385 PF01938 TRAM domain IL332_15390 PF02562 PhoH-like protein IL332_15395 PF02130 Uncharacterized protein family UPF0054 IL332_15400 PF00571 CBS domain IL332_15400 PF03471 Transporter associated domain IL332_15405 PF00795 Carbon-nitrogen hydrolase IL332_15410 PF07295 Zinc-ribbon containing domain IL332_15415 PF13603 Leucyl-tRNA synthetase, Domain 2 IL332_15415 PF08264 Anticodon-binding domain of tRNA IL332_15415 PF00133 tRNA synthetases class I (I, L, M and V) IL332_15430 PF01467 Cytidylyltransferase-like IL332_15440 PF02590 Predicted SPOUT methyltransferase IL332_15445 PF00905 Penicillin binding protein transpeptidase domain IL332_15445 PF03717 Penicillin-binding Protein dimerisation domain IL332_15450 PF01098 Cell cycle protein IL332_15455 PF13406 Transglycosylase SLT domain IL332_15460 PF05036 Sporulation related domain IL332_15460 PF03330 Lytic transglycolase IL332_15465 PF00768 D-alanyl-D-alanine carboxypeptidase IL332_15465 PF07943 Penicillin-binding protein 5, C-terminal domain IL332_15470 PF04359 Protein of unknown function (DUF493) IL332_15475 PF03099 Biotin/lipoate A/B protein ligase family IL332_15480 PF04055 Radical SAM superfamily IL332_15480 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IL332_15500 PF00183 Hsp90 protein IL332_15505 PF00145 C-5 cytosine-specific DNA methylase IL332_15520 PF00665 Integrase core domain IL332_15535 PF02508 Rnf-Nqr subunit, membrane protein IL332_15555 PF17768 RecJ OB domain IL332_15555 PF02272 DHHA1 domain IL332_15555 PF01368 DHH family IL332_15565 PF01741 Large-conductance mechanosensitive channel, MscL IL332_15570 PF02899 Phage integrase, N-terminal SAM-like domain IL332_15570 PF00589 Phage integrase family IL332_15575 PF00258 Flavodoxin IL332_15580 PF01523 Putative modulator of DNA gyrase IL332_15595 PF03734 L,D-transpeptidase catalytic domain IL332_15595 PF17969 L,D-transpeptidase C-terminal domain IL332_15600 PF16325 Peptidase family U32 C-terminal domain IL332_15600 PF01136 Peptidase family U32 IL332_15605 PF12838 4Fe-4S dicluster domain IL332_15610 PF06476 Protein of unknown function (DUF1090) IL332_15615 PF02635 DsrE/DsrF-like family IL332_15620 PF07690 Major Facilitator Superfamily IL332_15625 PF00013 KH domain IL332_15625 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IL332_15625 PF00575 S1 RNA binding domain IL332_15625 PF01138 3' exoribonuclease family, domain 1 IL332_15625 PF03725 3' exoribonuclease family, domain 2 IL332_15630 PF00312 Ribosomal protein S15 IL332_15635 PF01509 TruB family pseudouridylate synthase (N terminal domain) IL332_15635 PF09157 Pseudouridine synthase II TruB, C-terminal IL332_15635 PF16198 tRNA pseudouridylate synthase B C-terminal domain IL332_15640 PF02033 Ribosome-binding factor A IL332_15645 PF00009 Elongation factor Tu GTP binding domain IL332_15645 PF08364 Bacterial translation initiation factor IF-2 associated region IL332_15645 PF04760 Translation initiation factor IF-2, N-terminal region IL332_15645 PF11987 Translation-initiation factor 2 IL332_15650 PF08529 NusA N-terminal domain IL332_15650 PF00575 S1 RNA binding domain IL332_15650 PF13184 NusA-like KH domain IL332_15655 PF02576 RimP N-terminal domain IL332_15655 PF17384 RimP C-terminal SH3 domain IL332_15670 PF03840 Preprotein translocase SecG subunit IL332_15675 PF00121 Triosephosphate isomerase IL332_15680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IL332_15680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IL332_15680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IL332_15680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IL332_15685 PF00809 Pterin binding enzyme IL332_15690 PF06480 FtsH Extracellular IL332_15690 PF17862 AAA+ lid domain IL332_15690 PF01434 Peptidase family M41 IL332_15690 PF00004 ATPase family associated with various cellular activities (AAA) IL332_15695 PF01728 FtsJ-like methyltransferase IL332_15700 PF01985 CRS1 / YhbY (CRM) domain IL332_15710 PF03449 Transcription elongation factor, N-terminal IL332_15710 PF01272 Transcription elongation factor, GreA/GreB, C-term IL332_15715 PF13677 Membrane MotB of proton-channel complex MotA/MotB IL332_15715 PF00691 OmpA family IL332_15720 PF01618 MotA/TolQ/ExbB proton channel family IL332_15725 PF02609 Exonuclease VII small subunit IL332_15730 PF00348 Polyprenyl synthetase IL332_15735 PF02779 Transketolase, pyrimidine binding domain IL332_15735 PF02780 Transketolase, C-terminal domain IL332_15735 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IL332_15740 PF00528 Binding-protein-dependent transport system inner membrane component IL332_15740 PF12911 N-terminal TM domain of oligopeptide transport permease C IL332_15745 PF00528 Binding-protein-dependent transport system inner membrane component IL332_15750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IL332_15755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IL332_15755 PF00005 ABC transporter IL332_15760 PF04608 Phosphatidylglycerophosphatase A IL332_15765 PF02769 AIR synthase related protein, C-terminal domain IL332_15765 PF00586 AIR synthase related protein, N-terminal domain IL332_15770 PF01029 NusB family IL332_15775 PF00885 6,7-dimethyl-8-ribityllumazine synthase IL332_15780 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IL332_15780 PF00925 GTP cyclohydrolase II IL332_15785 PF00677 Lumazine binding domain IL332_15790 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IL332_15790 PF01872 RibD C-terminal domain IL332_15795 PF03477 ATP cone domain IL332_15805 PF00464 Serine hydroxymethyltransferase IL332_15815 PF02613 Nitrate reductase delta subunit IL332_15825 PF00563 EAL domain IL332_15825 PF00990 Diguanylate cyclase, GGDEF domain IL332_15825 PF03707 Bacterial signalling protein N terminal repeat IL332_15830 PF13193 AMP-binding enzyme C-terminal domain IL332_15830 PF00501 AMP-binding enzyme IL332_15830 PF16177 Acetyl-coenzyme A synthetase N-terminus IL332_15835 PF01220 Dehydroquinase class II IL332_15840 PF00364 Biotin-requiring enzyme IL332_15845 PF02785 Biotin carboxylase C-terminal domain IL332_15845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IL332_15845 PF00289 Biotin carboxylase, N-terminal domain IL332_15850 PF06196 Protein of unknown function (DUF997) IL332_15855 PF00474 Sodium:solute symporter family IL332_15860 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IL332_15860 PF02378 Phosphotransferase system, EIIC IL332_15860 PF00367 phosphotransferase system, EIIB IL332_15865 PF03466 LysR substrate binding domain IL332_15865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_15870 PF00107 Zinc-binding dehydrogenase IL332_15870 PF08240 Alcohol dehydrogenase GroES-like domain IL332_15880 PF00132 Bacterial transferase hexapeptide (six repeats) IL332_15880 PF12464 Maltose acetyltransferase IL332_15885 PF00672 HAMP domain IL332_15885 PF02743 Cache domain IL332_15885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_15895 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL332_15895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IL332_15900 PF01343 Peptidase family S49 IL332_15915 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IL332_15915 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IL332_15920 PF07023 Protein of unknown function (DUF1315) IL332_15925 PF17763 Glutaminase/Asparaginase C-terminal domain IL332_15925 PF00710 Asparaginase, N-terminal IL332_15930 PF03616 Sodium/glutamate symporter IL332_15935 PF02743 Cache domain IL332_15935 PF00672 HAMP domain IL332_15935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_15945 PF00152 tRNA synthetases class II (D, K and N) IL332_15945 PF01336 OB-fold nucleic acid binding domain IL332_15950 PF02567 Phenazine biosynthesis-like protein IL332_15955 PF00175 Oxidoreductase NAD-binding domain IL332_15955 PF00667 FAD binding domain IL332_15955 PF00258 Flavodoxin IL332_15960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IL332_15960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IL332_15965 PF01507 Phosphoadenosine phosphosulfate reductase family IL332_15970 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IL332_15975 PF00528 Binding-protein-dependent transport system inner membrane component IL332_15980 PF00005 ABC transporter IL332_15980 PF00571 CBS domain IL332_15990 PF12821 Threonine/Serine exporter, ThrE IL332_15995 PF06738 Putative threonine/serine exporter IL332_16005 PF00994 Probable molybdopterin binding domain IL332_16020 PF00194 Eukaryotic-type carbonic anhydrase IL332_16030 PF00294 pfkB family carbohydrate kinase IL332_16035 PF13806 Rieske-like [2Fe-2S] domain IL332_16035 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL332_16035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IL332_16035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IL332_16035 PF04324 BFD-like [2Fe-2S] binding domain IL332_16035 PF18267 Rubredoxin NAD+ reductase C-terminal domain IL332_16040 PF04324 BFD-like [2Fe-2S] binding domain IL332_16040 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IL332_16040 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL332_16040 PF13806 Rieske-like [2Fe-2S] domain IL332_16040 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IL332_16040 PF18267 Rubredoxin NAD+ reductase C-terminal domain IL332_16050 PF00528 Binding-protein-dependent transport system inner membrane component IL332_16055 PF00005 ABC transporter IL332_16065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IL332_16065 PF14824 Sirohaem biosynthesis protein central IL332_16065 PF10414 Sirohaem synthase dimerisation region IL332_16070 PF04324 BFD-like [2Fe-2S] binding domain IL332_16070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IL332_16070 PF00384 Molybdopterin oxidoreductase IL332_16070 PF01568 Molydopterin dinucleotide binding domain IL332_16085 PF00582 Universal stress protein family IL332_16095 PF00171 Aldehyde dehydrogenase family IL332_16100 PF00696 Amino acid kinase family IL332_16100 PF01472 PUA domain IL332_16105 PF07417 Sigma factor-binding transcriptional regulator Crl IL332_16110 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) IL332_16115 PF00156 Phosphoribosyl transferase domain IL332_16120 PF01546 Peptidase family M20/M25/M40 IL332_16120 PF07687 Peptidase dimerisation domain IL332_16125 PF00005 ABC transporter IL332_16125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IL332_16130 PF00005 ABC transporter IL332_16130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IL332_16135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IL332_16140 PF00528 Binding-protein-dependent transport system inner membrane component IL332_16140 PF12911 N-terminal TM domain of oligopeptide transport permease C IL332_16145 PF00528 Binding-protein-dependent transport system inner membrane component IL332_16150 PF00593 TonB dependent receptor IL332_16150 PF07715 TonB-dependent Receptor Plug Domain IL332_16160 PF01618 MotA/TolQ/ExbB proton channel family IL332_16165 PF01618 MotA/TolQ/ExbB proton channel family IL332_16170 PF02472 Biopolymer transport protein ExbD/TolR IL332_16185 PF06483 Chitinase C IL332_16185 PF00704 Glycosyl hydrolases family 18 IL332_16220 PF00749 tRNA synthetases class I (E and Q), catalytic domain IL332_16225 PF00749 tRNA synthetases class I (E and Q), catalytic domain IL332_16230 PF00672 HAMP domain IL332_16230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_16240 PF00313 'Cold-shock' DNA-binding domain IL332_16280 PF00929 Exonuclease IL332_16285 PF03193 RsgA GTPase IL332_16290 PF02666 Phosphatidylserine decarboxylase IL332_16295 PF09905 DNA-binding protein VF530 IL332_16315 PF03707 Bacterial signalling protein N terminal repeat IL332_16315 PF00990 Diguanylate cyclase, GGDEF domain IL332_16315 PF00563 EAL domain IL332_16320 PF06877 Regulator of ribonuclease activity B IL332_16340 PF00145 C-5 cytosine-specific DNA methylase IL332_16410 PF02146 Sir2 family IL332_16430 PF00589 Phage integrase family IL332_16445 PF00561 alpha/beta hydrolase fold IL332_16455 PF06004 Bacterial protein of unknown function (DUF903) IL332_16475 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF IL332_16480 PF06251 Capsule biosynthesis GfcC IL332_16485 PF06082 Exopolysaccharide biosynthesis protein YbjH IL332_16490 PF00581 Rhodanese-like domain IL332_16495 PF04960 Glutaminase IL332_16500 PF04320 Protein with unknown function (DUF469) IL332_16505 PF02390 Putative methyltransferase IL332_16510 PF01483 Proprotein convertase P-domain IL332_16510 PF04389 Peptidase family M28 IL332_16515 PF00155 Aminotransferase class I and II IL332_16520 PF00563 EAL domain IL332_16520 PF12792 CSS motif domain associated with EAL IL332_16525 PF08338 Domain of unknown function (DUF1731) IL332_16525 PF01370 NAD dependent epimerase/dehydratase family IL332_16535 PF00005 ABC transporter IL332_16540 PF13472 GDSL-like Lipase/Acylhydrolase family IL332_16545 PF00072 Response regulator receiver domain IL332_16545 PF01584 CheW-like domain IL332_16550 PF00267 Gram-negative porin IL332_16555 PF00571 CBS domain IL332_16555 PF00478 IMP dehydrogenase / GMP reductase domain IL332_16560 PF00005 ABC transporter IL332_16560 PF12848 ABC transporter IL332_16570 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IL332_16595 PF01939 Endonuclease NucS IL332_16605 PF13411 MerR HTH family regulatory protein IL332_16615 PF00474 Sodium:solute symporter family IL332_16620 PF03734 L,D-transpeptidase catalytic domain IL332_16620 PF17969 L,D-transpeptidase C-terminal domain IL332_16625 PF00924 Mechanosensitive ion channel IL332_16630 PF00871 Acetokinase family IL332_16635 PF04074 YhcH/YjgK/YiaL IL332_16645 PF13302 Acetyltransferase (GNAT) domain IL332_16650 PF13302 Acetyltransferase (GNAT) domain IL332_16655 PF04151 Bacterial pre-peptidase C-terminal domain IL332_16655 PF07504 Fungalysin/Thermolysin Propeptide Motif IL332_16655 PF03413 Peptidase propeptide and YPEB domain IL332_16655 PF01447 Thermolysin metallopeptidase, catalytic domain IL332_16655 PF02868 Thermolysin metallopeptidase, alpha-helical domain IL332_16660 PF03466 LysR substrate binding domain IL332_16660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_16775 PF02080 TrkA-C domain IL332_16775 PF06826 Predicted Permease Membrane Region IL332_16780 PF03006 Haemolysin-III related IL332_16785 PF00282 Pyridoxal-dependent decarboxylase conserved domain IL332_16790 PF04279 Intracellular septation protein A IL332_16795 PF03795 YCII-related domain IL332_16800 PF00459 Inositol monophosphatase family IL332_16810 PF00483 Nucleotidyl transferase IL332_16815 PF00854 POT family IL332_16850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL332_16860 PF01207 Dihydrouridine synthase (Dus) IL332_16865 PF02954 Bacterial regulatory protein, Fis family IL332_16895 PF01521 Iron-sulphur cluster biosynthesis IL332_16910 PF00202 Aminotransferase class-III IL332_16925 PF01569 PAP2 superfamily IL332_16935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_16935 PF03466 LysR substrate binding domain IL332_16940 PF00893 Small Multidrug Resistance protein IL332_16945 PF00893 Small Multidrug Resistance protein IL332_16950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IL332_16955 PF00905 Penicillin binding protein transpeptidase domain IL332_16955 PF00912 Transglycosylase IL332_16955 PF14814 Bifunctional transglycosylase second domain IL332_16970 PF17746 SfsA N-terminal OB domain IL332_16970 PF03749 Sugar fermentation stimulation protein RE domain IL332_16975 PF01258 Prokaryotic dksA/traR C4-type zinc finger IL332_16985 PF01743 Poly A polymerase head domain IL332_16985 PF12627 Probable RNA and SrmB- binding site of polymerase A IL332_16985 PF12626 Polymerase A arginine-rich C-terminus IL332_16990 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IL332_16995 PF02548 Ketopantoate hydroxymethyltransferase IL332_17000 PF02569 Pantoate-beta-alanine ligase IL332_17010 PF01061 ABC-2 type transporter IL332_17015 PF00005 ABC transporter IL332_17020 PF00156 Phosphoribosyl transferase domain IL332_17025 PF00440 Bacterial regulatory proteins, tetR family IL332_17030 PF02441 Flavoprotein IL332_17035 PF08245 Mur ligase middle domain IL332_17035 PF02875 Mur ligase family, glutamate ligase domain IL332_17035 PF01225 Mur ligase family, catalytic domain IL332_17040 PF00719 Inorganic pyrophosphatase IL332_17055 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) IL332_17070 PF00005 ABC transporter IL332_17090 PF08447 PAS fold IL332_17090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_17120 PF03600 Citrate transporter IL332_17120 PF02080 TrkA-C domain IL332_17125 PF00009 Elongation factor Tu GTP binding domain IL332_17130 PF01507 Phosphoadenosine phosphosulfate reductase family IL332_17140 PF01145 SPFH domain / Band 7 family IL332_17140 PF16200 C-terminal region of band_7 IL332_17145 PF01957 NfeD-like C-terminal, partner-binding IL332_17155 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IL332_17155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IL332_17160 PF07690 Major Facilitator Superfamily IL332_17165 PF01725 Ham1 family IL332_17170 PF04055 Radical SAM superfamily IL332_17170 PF06969 HemN C-terminal domain IL332_17175 PF03889 Alternative ribosome-rescue factor A IL332_17185 PF13411 MerR HTH family regulatory protein IL332_17190 PF01808 AICARFT/IMPCHase bienzyme IL332_17190 PF02142 MGS-like domain IL332_17195 PF02844 Phosphoribosylglycinamide synthetase, N domain IL332_17195 PF02843 Phosphoribosylglycinamide synthetase, C domain IL332_17195 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IL332_17250 PF13362 Toprim domain IL332_17250 PF08401 Domain of unknown function (DUF1738) IL332_17250 PF18818 Metallopeptidase superfamily domain IL332_17275 PF02661 Fic/DOC family IL332_17275 PF13784 Fic/DOC family N-terminal IL332_17285 PF00140 Sigma-70 factor, region 1.2 IL332_17285 PF04542 Sigma-70 region 2 IL332_17285 PF04539 Sigma-70 region 3 IL332_17285 PF04545 Sigma-70, region 4 IL332_17285 PF03979 Sigma-70 factor, region 1.1 IL332_17285 PF04546 Sigma-70, non-essential region IL332_17290 PF10410 DnaB-helicase binding domain of primase IL332_17290 PF08278 DNA primase DnaG DnaB-binding IL332_17290 PF01807 CHC2 zinc finger IL332_17290 PF08275 DNA primase catalytic core, N-terminal domain IL332_17295 PF09424 Yqey-like protein IL332_17300 PF01165 Ribosomal protein S21 IL332_17305 PF00814 Glycoprotease family IL332_17310 PF04542 Sigma-70 region 2 IL332_17310 PF04545 Sigma-70, region 4 IL332_17310 PF04539 Sigma-70 region 3 IL332_17310 PF00140 Sigma-70 factor, region 1.2 IL332_17315 PF01551 Peptidase family M23 IL332_17315 PF01476 LysM domain IL332_17320 PF09335 SNARE associated Golgi protein IL332_17330 PF01975 Survival protein SurE IL332_17335 PF01142 tRNA pseudouridine synthase D (TruD) IL332_17340 PF02542 YgbB family IL332_17345 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IL332_17350 PF04977 Septum formation initiator IL332_17355 PF00113 Enolase, C-terminal TIM barrel domain IL332_17355 PF03952 Enolase, N-terminal domain IL332_17360 PF00117 Glutamine amidotransferase class-I IL332_17360 PF06418 CTP synthase N-terminus IL332_17365 PF03819 MazG nucleotide pyrophosphohydrolase domain IL332_17370 PF02824 TGS domain IL332_17370 PF13291 ACT domain IL332_17370 PF04607 Region found in RelA / SpoT proteins IL332_17380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_17380 PF00672 HAMP domain IL332_17380 PF00512 His Kinase A (phospho-acceptor) domain IL332_17380 PF01627 Hpt domain IL332_17380 PF00072 Response regulator receiver domain IL332_17380 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IL332_17385 PF07308 Protein of unknown function (DUF1456) IL332_17390 PF01510 N-acetylmuramoyl-L-alanine amidase IL332_17395 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IL332_17400 PF11967 Recombination protein O N terminal IL332_17400 PF02565 Recombination protein O C terminal IL332_17405 PF01926 50S ribosome-binding GTPase IL332_17405 PF07650 KH domain IL332_17410 PF00035 Double-stranded RNA binding motif IL332_17410 PF14622 Ribonuclease-III-like IL332_17415 PF10502 Signal peptidase, peptidase S26 IL332_17420 PF00009 Elongation factor Tu GTP binding domain IL332_17420 PF03144 Elongation factor Tu domain 2 IL332_17420 PF06421 GTP-binding protein LepA C-terminus IL332_17420 PF00679 Elongation factor G C-terminus IL332_17430 PF17188 MucB/RseB C-terminal domain IL332_17430 PF03888 MucB/RseB N-terminal domain IL332_17435 PF03873 Anti sigma-E protein RseA, C-terminal domain IL332_17435 PF03872 Anti sigma-E protein RseA, N-terminal domain IL332_17440 PF04542 Sigma-70 region 2 IL332_17440 PF08281 Sigma-70, region 4 IL332_17455 PF03937 Flavinator of succinate dehydrogenase IL332_17460 PF01571 Aminomethyltransferase folate-binding domain IL332_17465 PF03466 LysR substrate binding domain IL332_17465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_17480 PF03091 CutA1 divalent ion tolerance protein IL332_17485 PF11412 Disulphide bond corrector protein DsbC IL332_17485 PF02683 Cytochrome C biogenesis protein transmembrane region IL332_17500 PF01116 Fructose-bisphosphate aldolase class-II IL332_17505 PF00162 Phosphoglycerate kinase IL332_17510 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IL332_17510 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IL332_17515 PF00480 ROK family IL332_17520 PF01208 Uroporphyrinogen decarboxylase (URO-D) IL332_17525 PF09297 NADH pyrophosphatase zinc ribbon domain IL332_17525 PF00293 NUDIX domain IL332_17530 PF08239 Bacterial SH3 domain IL332_17535 PF00027 Cyclic nucleotide-binding domain IL332_17535 PF00520 Ion transport protein IL332_17540 PF02743 Cache domain IL332_17540 PF00672 HAMP domain IL332_17540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_17550 PF08335 GlnD PII-uridylyltransferase IL332_17550 PF03710 Glutamate-ammonia ligase adenylyltransferase IL332_17565 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IL332_17565 PF00326 Prolyl oligopeptidase family IL332_17570 PF00291 Pyridoxal-phosphate dependent enzyme IL332_17575 PF00528 Binding-protein-dependent transport system inner membrane component IL332_17580 PF00528 Binding-protein-dependent transport system inner membrane component IL332_17585 PF00005 ABC transporter IL332_17590 PF00497 Bacterial extracellular solute-binding proteins, family 3 IL332_17595 PF13194 Domain of unknown function (DUF4010) IL332_17600 PF14602 Hexapeptide repeat of succinyl-transferase IL332_17600 PF12464 Maltose acetyltransferase IL332_17625 PF03466 LysR substrate binding domain IL332_17625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_17630 PF14698 Argininosuccinate lyase C-terminal IL332_17630 PF00206 Lyase IL332_17635 PF00764 Arginosuccinate synthase IL332_17640 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IL332_17640 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IL332_17645 PF00696 Amino acid kinase family IL332_17650 PF01118 Semialdehyde dehydrogenase, NAD binding domain IL332_17650 PF02774 Semialdehyde dehydrogenase, dimerisation domain IL332_17655 PF01546 Peptidase family M20/M25/M40 IL332_17655 PF07687 Peptidase dimerisation domain IL332_17660 PF00311 Phosphoenolpyruvate carboxylase IL332_17665 PF00990 Diguanylate cyclase, GGDEF domain IL332_17670 PF04073 Aminoacyl-tRNA editing domain IL332_17690 PF00155 Aminotransferase class I and II IL332_17690 PF00392 Bacterial regulatory proteins, gntR family IL332_17705 PF03466 LysR substrate binding domain IL332_17705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_17710 PF03788 LrgA family IL332_17715 PF04172 LrgB-like family IL332_17720 PF00696 Amino acid kinase family IL332_17720 PF03447 Homoserine dehydrogenase, NAD binding domain IL332_17720 PF00742 Homoserine dehydrogenase IL332_17730 PF01340 Met Apo-repressor, MetJ IL332_17745 PF03222 Tryptophan/tyrosine permease family IL332_17750 PF00459 Inositol monophosphatase family IL332_17755 PF00293 NUDIX domain IL332_17760 PF13419 Haloacid dehalogenase-like hydrolase IL332_17770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_17770 PF03466 LysR substrate binding domain IL332_17775 PF01479 S4 domain IL332_17775 PF00579 tRNA synthetases class I (W and Y) IL332_17780 PF00196 Bacterial regulatory proteins, luxR family IL332_17785 PF01203 Type II secretion system (T2SS), protein N IL332_17790 PF04612 Type II secretion system (T2SS), protein M IL332_17795 PF05134 Type II secretion system (T2SS), protein L IL332_17795 PF12693 GspL periplasmic domain IL332_17800 PF03934 Type II secretion system (T2SS), protein K IL332_17810 PF11612 Type II secretion system (T2SS), protein J IL332_17810 PF07963 Prokaryotic N-terminal methylation motif IL332_17815 PF07963 Prokaryotic N-terminal methylation motif IL332_17815 PF02501 Type II secretion system (T2SS), protein I IL332_17820 PF07963 Prokaryotic N-terminal methylation motif IL332_17820 PF12019 Type II transport protein GspH IL332_17825 PF08334 Type II secretion system (T2SS), protein G IL332_17825 PF07963 Prokaryotic N-terminal methylation motif IL332_17830 PF00482 Type II secretion system (T2SS), protein F IL332_17835 PF00437 Type II/IV secretion system protein IL332_17840 PF03958 Bacterial type II/III secretion system short domain IL332_17840 PF00263 Bacterial type II and III secretion system protein IL332_17845 PF11356 Type II secretion system protein C IL332_17850 PF01479 S4 domain IL332_17855 PF01430 Hsp33 protein IL332_17860 PF01293 Phosphoenolpyruvate carboxykinase IL332_17865 PF00392 Bacterial regulatory proteins, gntR family IL332_17870 PF01321 Creatinase/Prolidase N-terminal domain IL332_17870 PF00557 Metallopeptidase family M24 IL332_17875 PF00583 Acetyltransferase (GNAT) family IL332_17880 PF05433 Glycine zipper 2TM domain IL332_17885 PF01928 CYTH domain IL332_17890 PF01865 Protein of unknown function DUF47 IL332_17895 PF01384 Phosphate transporter family IL332_17900 PF12627 Probable RNA and SrmB- binding site of polymerase A IL332_17900 PF01966 HD domain IL332_17900 PF01743 Poly A polymerase head domain IL332_17905 PF13401 AAA domain IL332_17905 PF01471 Putative peptidoglycan binding domain IL332_17910 PF16537 Type II secretion system protein B IL332_17915 PF00730 HhH-GPD superfamily base excision DNA repair protein IL332_17915 PF10576 Iron-sulfur binding domain of endonuclease III IL332_17915 PF14815 NUDIX domain IL332_17915 PF00633 Helix-hairpin-helix motif IL332_17920 PF04362 Bacterial Fe(2+) trafficking IL332_17925 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain IL332_17925 PF01464 Transglycosylase SLT domain IL332_17935 PF00657 GDSL-like Lipase/Acylhydrolase IL332_17940 PF01389 OmpA-like transmembrane domain IL332_17940 PF00691 OmpA family IL332_17945 PF03886 ABC-type transport auxiliary lipoprotein component IL332_17950 PF02470 MlaD protein IL332_17955 PF04403 Paraquat-inducible protein A IL332_17960 PF17209 Hfq protein IL332_17965 PF13419 Haloacid dehalogenase-like hydrolase IL332_17970 PF00563 EAL domain IL332_17970 PF01590 GAF domain IL332_17970 PF00990 Diguanylate cyclase, GGDEF domain IL332_17970 PF00360 Phytochrome region IL332_17975 PF00701 Dihydrodipicolinate synthetase family IL332_17980 PF08468 Methyltransferase small domain N-terminal IL332_17980 PF05175 Methyltransferase small domain IL332_17985 PF00483 Nucleotidyl transferase IL332_17990 PF00534 Glycosyl transferases group 1 IL332_17990 PF08323 Starch synthase catalytic domain IL332_18030 PF03553 Na+/H+ antiporter family IL332_18035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_18035 PF03466 LysR substrate binding domain IL332_18040 PF13416 Bacterial extracellular solute-binding protein IL332_18045 PF00005 ABC transporter IL332_18045 PF08402 TOBE domain IL332_18055 PF00528 Binding-protein-dependent transport system inner membrane component IL332_18060 PF00171 Aldehyde dehydrogenase family IL332_18065 PF01040 UbiA prenyltransferase family IL332_18090 PF00510 Cytochrome c oxidase subunit III IL332_18095 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 IL332_18100 PF00115 Cytochrome C and Quinol oxidase polypeptide I IL332_18105 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IL332_18105 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IL332_18110 PF17176 tRNA-binding domain IL332_18110 PF05127 Helicase IL332_18110 PF13718 GNAT acetyltransferase 2 IL332_18110 PF08351 Domain of unknown function (DUF1726) IL332_18120 PF04324 BFD-like [2Fe-2S] binding domain IL332_18125 PF00210 Ferritin-like domain IL332_18130 PF02142 MGS-like domain IL332_18145 PF17763 Glutaminase/Asparaginase C-terminal domain IL332_18145 PF00710 Asparaginase, N-terminal IL332_18155 PF00356 Bacterial regulatory proteins, lacI family IL332_18165 PF00480 ROK family IL332_18170 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit IL332_18175 PF00232 Glycosyl hydrolase family 1 IL332_18180 PF02378 Phosphotransferase system, EIIC IL332_18180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IL332_18185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IL332_18195 PF01238 Phosphomannose isomerase type I IL332_18205 PF00356 Bacterial regulatory proteins, lacI family IL332_18210 PF00367 phosphotransferase system, EIIB IL332_18210 PF02378 Phosphotransferase system, EIIC IL332_18215 PF00128 Alpha amylase, catalytic domain IL332_18215 PF11941 Domain of unknown function (DUF3459) IL332_18220 PF12464 Maltose acetyltransferase IL332_18220 PF14602 Hexapeptide repeat of succinyl-transferase IL332_18225 PF01037 Lrp/AsnC ligand binding domain IL332_18230 PF00892 EamA-like transporter family IL332_18275 PF02660 Glycerol-3-phosphate acyltransferase IL332_18280 PF02152 Dihydroneopterin aldolase IL332_18285 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IL332_18300 PF02492 CobW/HypB/UreG, nucleotide-binding domain IL332_18300 PF07683 Cobalamin synthesis protein cobW C-terminal domain IL332_18305 PF04030 D-arabinono-1,4-lactone oxidase IL332_18305 PF01565 FAD binding domain IL332_18310 PF01810 LysE type translocator IL332_18315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_18315 PF03466 LysR substrate binding domain IL332_18320 PF12792 CSS motif domain associated with EAL IL332_18320 PF00563 EAL domain IL332_18325 PF00330 Aconitase family (aconitate hydratase) IL332_18325 PF06434 Aconitate hydratase 2 N-terminus IL332_18325 PF11791 Aconitate B N-terminal domain IL332_18330 PF01734 Patatin-like phospholipase IL332_18335 PF12729 Four helix bundle sensory module for signal transduction IL332_18335 PF00672 HAMP domain IL332_18335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_18340 PF00672 HAMP domain IL332_18340 PF12729 Four helix bundle sensory module for signal transduction IL332_18340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_18350 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL332_18350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IL332_18360 PF00456 Transketolase, thiamine diphosphate binding domain IL332_18360 PF17831 Pyruvate dehydrogenase E1 component middle domain IL332_18365 PF00392 Bacterial regulatory proteins, gntR family IL332_18365 PF07729 FCD domain IL332_18370 PF01510 N-acetylmuramoyl-L-alanine amidase IL332_18380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IL332_18380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IL332_18385 PF07963 Prokaryotic N-terminal methylation motif IL332_18390 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IL332_18390 PF00437 Type II/IV secretion system protein IL332_18395 PF00482 Type II secretion system (T2SS), protein F IL332_18400 PF06750 Bacterial Peptidase A24 N-terminal domain IL332_18400 PF01478 Type IV leader peptidase family IL332_18405 PF01121 Dephospho-CoA kinase IL332_18410 PF07072 Cell division protein IL332_18415 PF03884 DNA gyrase inhibitor YacG IL332_18420 PF00293 NUDIX domain IL332_18430 PF02810 SEC-C motif IL332_18430 PF07517 SecA DEAD-like domain IL332_18430 PF07516 SecA Wing and Scaffold domain IL332_18430 PF01043 SecA preprotein cross-linking domain IL332_18440 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IL332_18445 PF12327 FtsZ family, C-terminal domain IL332_18445 PF00091 Tubulin/FtsZ family, GTPase domain IL332_18450 PF02491 SHS2 domain inserted in FTSA IL332_18455 PF03799 Cell division protein FtsQ IL332_18455 PF08478 POTRA domain, FtsQ-type IL332_18460 PF01225 Mur ligase family, catalytic domain IL332_18460 PF02875 Mur ligase family, glutamate ligase domain IL332_18460 PF08245 Mur ligase middle domain IL332_18465 PF03033 Glycosyltransferase family 28 N-terminal domain IL332_18465 PF04101 Glycosyltransferase family 28 C-terminal domain IL332_18470 PF01098 Cell cycle protein IL332_18475 PF08245 Mur ligase middle domain IL332_18475 PF02875 Mur ligase family, glutamate ligase domain IL332_18480 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IL332_18480 PF00953 Glycosyl transferase family 4 IL332_18485 PF01225 Mur ligase family, catalytic domain IL332_18485 PF08245 Mur ligase middle domain IL332_18485 PF02875 Mur ligase family, glutamate ligase domain IL332_18490 PF02875 Mur ligase family, glutamate ligase domain IL332_18490 PF01225 Mur ligase family, catalytic domain IL332_18490 PF08245 Mur ligase middle domain IL332_18500 PF04999 Cell division protein FtsL IL332_18505 PF01795 MraW methylase family IL332_18510 PF02381 MraZ protein, putative antitoxin-like IL332_18520 PF01476 LysM domain IL332_18520 PF01464 Transglycosylase SLT domain IL332_18535 PF01618 MotA/TolQ/ExbB proton channel family IL332_18540 PF04542 Sigma-70 region 2 IL332_18540 PF04545 Sigma-70, region 4 IL332_18560 PF02561 Flagellar protein FliS IL332_18565 PF02465 Flagellar hook-associated protein 2 N-terminus IL332_18565 PF07195 Flagellar hook-associated protein 2 C-terminus IL332_18565 PF07196 Flagellin hook IN motif IL332_18570 PF00700 Bacterial flagellin C-terminal helical region IL332_18570 PF00669 Bacterial flagellin N-terminal helical region IL332_18590 PF00669 Bacterial flagellin N-terminal helical region IL332_18595 PF00460 Flagella basal body rod protein IL332_18595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IL332_18605 PF02119 Flagellar P-ring protein IL332_18610 PF02107 Flagellar L-ring protein IL332_18615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IL332_18615 PF00460 Flagella basal body rod protein IL332_18620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IL332_18620 PF00460 Flagella basal body rod protein IL332_18625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IL332_18625 PF07559 Flagellar basal body protein FlaE IL332_18625 PF00460 Flagella basal body rod protein IL332_18630 PF13861 FlgD Tudor-like domain IL332_18630 PF13860 FlgD Ig-like domain IL332_18630 PF03963 Flagellar hook capping protein - N-terminal region IL332_18635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IL332_18635 PF00460 Flagella basal body rod protein IL332_18640 PF00460 Flagella basal body rod protein IL332_18645 PF13144 Chaperone for flagella basal body P-ring formation IL332_18665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IL332_18665 PF18269 T3SS EscN ATPase C-terminal domain IL332_18675 PF14842 FliG N-terminal domain IL332_18675 PF14841 FliG middle domain IL332_18675 PF01706 FliG C-terminal domain IL332_18680 PF01514 Secretory protein of YscJ/FliF family IL332_18680 PF08345 Flagellar M-ring protein C-terminal IL332_18685 PF02049 Flagellar hook-basal body complex protein FliE IL332_18690 PF00072 Response regulator receiver domain IL332_18690 PF02954 Bacterial regulatory protein, Fis family IL332_18690 PF00158 Sigma-54 interaction domain IL332_18695 PF00771 FHIPEP family IL332_18700 PF01312 FlhB HrpN YscU SpaS Family IL332_18705 PF01311 Bacterial export proteins, family 1 IL332_18710 PF01313 Bacterial export proteins, family 3 IL332_18715 PF00813 FliP family IL332_18720 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IL332_18735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IL332_18740 PF04348 LppC putative lipoprotein IL332_18745 PF02021 Uncharacterised protein family UPF0102 IL332_18750 PF13580 SIS domain IL332_18755 PF04972 BON domain IL332_18760 PF04386 Stringent starvation protein B IL332_18765 PF02798 Glutathione S-transferase, N-terminal domain IL332_18765 PF00043 Glutathione S-transferase, C-terminal domain IL332_18770 PF02167 Cytochrome C1 family IL332_18775 PF00033 Cytochrome b/b6/petB IL332_18775 PF00032 Cytochrome b(C-terminal)/b6/petD IL332_18780 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IL332_18780 PF00355 Rieske [2Fe-2S] domain IL332_18785 PF00380 Ribosomal protein S9/S16 IL332_18790 PF00572 Ribosomal protein L13 IL332_18795 PF03969 AFG1-like ATPase IL332_18805 PF13180 PDZ domain IL332_18805 PF00595 PDZ domain IL332_18810 PF13180 PDZ domain IL332_18840 PF01979 Amidohydrolase family IL332_18845 PF03841 L-seryl-tRNA selenium transferase IL332_18850 PF07071 KDGP aldolase IL332_18860 PF00381 PTS HPr component phosphorylation site IL332_18865 PF03668 P-loop ATPase protein family IL332_18870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IL332_18875 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IL332_18880 PF00309 Sigma-54 factor, Activator interacting domain (AID) IL332_18880 PF04552 Sigma-54, DNA binding domain IL332_18880 PF04963 Sigma-54 factor, core binding domain IL332_18885 PF12399 Branched-chain amino acid ATP-binding cassette transporter IL332_18885 PF00005 ABC transporter IL332_18890 PF03968 OstA-like protein IL332_18905 PF01380 SIS domain IL332_18905 PF00571 CBS domain IL332_18915 PF02405 Permease MlaE IL332_18920 PF02470 MlaD protein IL332_18925 PF05494 MlaC protein IL332_18935 PF01722 BolA-like protein IL332_18940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IL332_18945 PF01523 Putative modulator of DNA gyrase IL332_18950 PF04751 Protein of unknown function (DUF615) IL332_18960 PF04363 Protein of unknown function (DUF496) IL332_18990 PF07883 Cupin domain IL332_18990 PF01381 Helix-turn-helix IL332_18995 PF03594 Benzoate membrane transport protein IL332_19005 PF02219 Methylenetetrahydrofolate reductase IL332_19020 PF00672 HAMP domain IL332_19020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_19020 PF12729 Four helix bundle sensory module for signal transduction IL332_19025 PF03922 OmpW family IL332_19030 PF00005 ABC transporter IL332_19030 PF17755 UvrA DNA-binding domain IL332_19030 PF17760 UvrA interaction domain IL332_19035 PF00196 Bacterial regulatory proteins, luxR family IL332_19040 PF00436 Single-strand binding protein family IL332_19055 PF00313 'Cold-shock' DNA-binding domain IL332_19060 PF00672 HAMP domain IL332_19060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_19060 PF00512 His Kinase A (phospho-acceptor) domain IL332_19065 PF00486 Transcriptional regulatory protein, C terminal IL332_19065 PF00072 Response regulator receiver domain IL332_19085 PF00990 Diguanylate cyclase, GGDEF domain IL332_19085 PF08448 PAS fold IL332_19090 PF00543 Nitrogen regulatory protein P-II IL332_19095 PF00909 Ammonium Transporter Family IL332_19105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IL332_19120 PF00580 UvrD/REP helicase N-terminal domain IL332_19120 PF12705 PD-(D/E)XK nuclease superfamily IL332_19120 PF13361 UvrD-like helicase C-terminal domain IL332_19130 PF07681 DoxX IL332_19135 PF02678 Pirin IL332_19135 PF17954 Quercetinase C-terminal cupin domain IL332_19145 PF03466 LysR substrate binding domain IL332_19145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_19155 PF00392 Bacterial regulatory proteins, gntR family IL332_19155 PF07702 UTRA domain IL332_19170 PF00528 Binding-protein-dependent transport system inner membrane component IL332_19180 PF00005 ABC transporter IL332_19180 PF08402 TOBE domain IL332_19190 PF00072 Response regulator receiver domain IL332_19190 PF00990 Diguanylate cyclase, GGDEF domain IL332_19215 PF06628 Catalase-related immune-responsive IL332_19215 PF00199 Catalase IL332_19240 PF01594 AI-2E family transporter IL332_19245 PF00106 short chain dehydrogenase IL332_19250 PF04371 Porphyromonas-type peptidyl-arginine deiminase IL332_19255 PF13416 Bacterial extracellular solute-binding protein IL332_19260 PF00795 Carbon-nitrogen hydrolase IL332_19265 PF04371 Porphyromonas-type peptidyl-arginine deiminase IL332_19270 PF03466 LysR substrate binding domain IL332_19270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_19275 PF00158 Sigma-54 interaction domain IL332_19275 PF00989 PAS fold IL332_19275 PF02954 Bacterial regulatory protein, Fis family IL332_19280 PF03610 PTS system fructose IIA component IL332_19280 PF00381 PTS HPr component phosphorylation site IL332_19280 PF00391 PEP-utilising enzyme, mobile domain IL332_19280 PF05524 PEP-utilising enzyme, N-terminal IL332_19285 PF02734 DAK2 domain IL332_19290 PF02733 Dak1 domain IL332_19295 PF00860 Permease family IL332_19335 PF00009 Elongation factor Tu GTP binding domain IL332_19335 PF03143 Elongation factor Tu C-terminal domain IL332_19335 PF03144 Elongation factor Tu domain 2 IL332_19340 PF03764 Elongation factor G, domain IV IL332_19340 PF03144 Elongation factor Tu domain 2 IL332_19340 PF14492 Elongation Factor G, domain II IL332_19340 PF00009 Elongation factor Tu GTP binding domain IL332_19340 PF00679 Elongation factor G C-terminus IL332_19345 PF00177 Ribosomal protein S7p/S5e IL332_19350 PF00164 Ribosomal protein S12/S23 IL332_19355 PF04077 DsrH like protein IL332_19360 PF02635 DsrE/DsrF-like family IL332_19365 PF02635 DsrE/DsrF-like family IL332_19370 PF01042 Endoribonuclease L-PSP IL332_19380 PF04998 RNA polymerase Rpb1, domain 5 IL332_19380 PF05000 RNA polymerase Rpb1, domain 4 IL332_19380 PF00623 RNA polymerase Rpb1, domain 2 IL332_19380 PF04997 RNA polymerase Rpb1, domain 1 IL332_19380 PF04983 RNA polymerase Rpb1, domain 3 IL332_19385 PF04565 RNA polymerase Rpb2, domain 3 IL332_19385 PF10385 RNA polymerase beta subunit external 1 domain IL332_19385 PF00562 RNA polymerase Rpb2, domain 6 IL332_19385 PF04560 RNA polymerase Rpb2, domain 7 IL332_19385 PF04561 RNA polymerase Rpb2, domain 2 IL332_19385 PF04563 RNA polymerase beta subunit IL332_19390 PF16320 Ribosomal protein L7/L12 dimerisation domain IL332_19390 PF00542 Ribosomal protein L7/L12 C-terminal domain IL332_19395 PF00466 Ribosomal protein L10 IL332_19400 PF00687 Ribosomal protein L1p/L10e family IL332_19405 PF00298 Ribosomal protein L11, RNA binding domain IL332_19405 PF03946 Ribosomal protein L11, N-terminal domain IL332_19410 PF00467 KOW motif IL332_19410 PF02357 Transcription termination factor nusG IL332_19415 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IL332_19425 PF03143 Elongation factor Tu C-terminal domain IL332_19425 PF03144 Elongation factor Tu domain 2 IL332_19425 PF00009 Elongation factor Tu GTP binding domain IL332_19440 PF00485 Phosphoribulokinase / Uridine kinase family IL332_19445 PF02237 Biotin protein ligase C terminal domain IL332_19445 PF03099 Biotin/lipoate A/B protein ligase family IL332_19445 PF08279 HTH domain IL332_19450 PF01565 FAD binding domain IL332_19450 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IL332_19455 PF02254 TrkA-N domain IL332_19455 PF02080 TrkA-C domain IL332_19465 PF01751 Toprim domain IL332_19465 PF01131 DNA topoisomerase IL332_19470 PF03264 NapC/NirT cytochrome c family, N-terminal region IL332_19475 PF00384 Molybdopterin oxidoreductase IL332_19475 PF18364 Molybdopterin oxidoreductase N-terminal domain IL332_19475 PF01568 Molydopterin dinucleotide binding domain IL332_19490 PF00486 Transcriptional regulatory protein, C terminal IL332_19490 PF00072 Response regulator receiver domain IL332_19505 PF01794 Ferric reductase like transmembrane component IL332_19510 PF00174 Oxidoreductase molybdopterin binding domain IL332_19515 PF06496 Protein of unknown function (DUF1097) IL332_19520 PF00072 Response regulator receiver domain IL332_19520 PF00158 Sigma-54 interaction domain IL332_19530 PF00512 His Kinase A (phospho-acceptor) domain IL332_19530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_19550 PF00478 IMP dehydrogenase / GMP reductase domain IL332_19550 PF00571 CBS domain IL332_19560 PF01037 Lrp/AsnC ligand binding domain IL332_19565 PF03590 Aspartate-ammonia ligase IL332_19575 PF00004 ATPase family associated with various cellular activities (AAA) IL332_19575 PF07724 AAA domain (Cdc48 subfamily) IL332_19575 PF17871 AAA lid domain IL332_19575 PF10431 C-terminal, D2-small domain, of ClpB protein IL332_19575 PF02861 Clp amino terminal domain, pathogenicity island component IL332_19580 PF02578 Multi-copper polyphenol oxidoreductase laccase IL332_19585 PF00849 RNA pseudouridylate synthase IL332_19585 PF01479 S4 domain IL332_19590 PF13525 Outer membrane lipoprotein IL332_19595 PF03313 Serine dehydratase alpha chain IL332_19600 PF08348 YheO-like PAS domain IL332_19600 PF13309 HTH domain IL332_19605 PF02233 NAD(P) transhydrogenase beta subunit IL332_19610 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IL332_19610 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IL332_19610 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IL332_19615 PF00465 Iron-containing alcohol dehydrogenase IL332_19620 PF12833 Helix-turn-helix domain IL332_19620 PF06719 AraC-type transcriptional regulator N-terminus IL332_19625 PF08212 Lipocalin-like domain IL332_19665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IL332_19665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IL332_19670 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain IL332_19670 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain IL332_19675 PF01316 Arginine repressor, DNA binding domain IL332_19675 PF02863 Arginine repressor, C-terminal domain IL332_19680 PF03606 C4-dicarboxylate anaerobic carrier IL332_19685 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IL332_19685 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IL332_19690 PF00696 Amino acid kinase family IL332_19705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL332_19705 PF00672 HAMP domain IL332_19705 PF02743 Cache domain IL332_19710 PF02653 Branched-chain amino acid transport system / permease component IL332_19715 PF00005 ABC transporter IL332_19720 PF13407 Periplasmic binding protein domain IL332_19730 PF00356 Bacterial regulatory proteins, lacI family IL332_19735 PF16363 GDP-mannose 4,6 dehydratase IL332_19740 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain IL332_19740 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain IL332_19745 PF00288 GHMP kinases N terminal domain IL332_19745 PF08544 GHMP kinases C terminal IL332_19745 PF10509 Galactokinase galactose-binding signature IL332_19750 PF01263 Aldose 1-epimerase IL332_19755 PF00248 Aldo/keto reductase family IL332_19760 PF02673 Bacitracin resistance protein BacA IL332_19765 PF12973 ChrR Cupin-like domain IL332_19770 PF04542 Sigma-70 region 2 IL332_19770 PF04545 Sigma-70, region 4 IL332_19780 PF05746 DALR anticodon binding domain IL332_19780 PF03485 Arginyl tRNA synthetase N terminal domain IL332_19780 PF00750 tRNA synthetases class I (R) IL332_19790 PF00227 Proteasome subunit IL332_19795 PF00004 ATPase family associated with various cellular activities (AAA) IL332_19795 PF07724 AAA domain (Cdc48 subfamily) IL332_19795 PF10431 C-terminal, D2-small domain, of ClpB protein IL332_19800 PF07690 Major Facilitator Superfamily IL332_19815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL332_19820 PF00005 ABC transporter IL332_19835 PF18267 Rubredoxin NAD+ reductase C-terminal domain IL332_19835 PF04324 BFD-like [2Fe-2S] binding domain IL332_19835 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IL332_19835 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IL332_19835 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL332_19840 PF13806 Rieske-like [2Fe-2S] domain IL332_19845 PF01226 Formate/nitrite transporter IL332_19855 PF03448 MgtE intracellular N domain IL332_19855 PF01769 Divalent cation transporter IL332_19855 PF00571 CBS domain IL332_19860 PF03737 Aldolase/RraA IL332_19865 PF02592 Putative vitamin uptake transporter IL332_19875 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IL332_19880 PF00034 Cytochrome c IL332_19885 PF00270 DEAD/DEAH box helicase IL332_19885 PF00271 Helicase conserved C-terminal domain IL332_19885 PF09382 RQC domain IL332_19885 PF00570 HRDC domain IL332_19885 PF16124 RecQ zinc-binding IL332_19890 PF03061 Thioesterase superfamily IL332_19905 PF03473 MOSC domain IL332_19905 PF03475 3-alpha domain IL332_19910 PF00528 Binding-protein-dependent transport system inner membrane component IL332_19915 PF00528 Binding-protein-dependent transport system inner membrane component IL332_19920 PF08402 TOBE domain IL332_19920 PF00005 ABC transporter IL332_19925 PF13416 Bacterial extracellular solute-binding protein IL332_19930 PF13416 Bacterial extracellular solute-binding protein IL332_19935 PF00202 Aminotransferase class-III IL332_19940 PF00120 Glutamine synthetase, catalytic domain IL332_19945 PF01258 Prokaryotic dksA/traR C4-type zinc finger IL332_19960 PF05981 CreA protein IL332_19965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IL332_19965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IL332_19970 PF00012 Hsp70 protein IL332_19985 PF00128 Alpha amylase, catalytic domain IL332_19985 PF02903 Alpha amylase, N-terminal ig-like domain IL332_20000 PF05958 tRNA (Uracil-5-)-methyltransferase IL332_20005 PF00072 Response regulator receiver domain IL332_20005 PF00486 Transcriptional regulatory protein, C terminal IL332_20010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_20010 PF00512 His Kinase A (phospho-acceptor) domain IL332_20010 PF00672 HAMP domain IL332_20020 PF03949 Malic enzyme, NAD binding domain IL332_20020 PF00390 Malic enzyme, N-terminal domain IL332_20025 PF13460 NAD(P)H-binding IL332_20025 PF11066 Protein of unknown function (DUF2867) IL332_20030 PF01197 Ribosomal protein L31 IL332_20035 PF00270 DEAD/DEAH box helicase IL332_20035 PF18074 Primosomal protein N C-terminal domain IL332_20035 PF17764 3′ DNA-binding domain (3′BD) IL332_20035 PF00271 Helicase conserved C-terminal domain IL332_20035 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IL332_20040 PF00440 Bacterial regulatory proteins, tetR family IL332_20055 PF00291 Pyridoxal-phosphate dependent enzyme IL332_20055 PF00585 C-terminal regulatory domain of Threonine dehydratase IL332_20060 PF00920 Dehydratase family IL332_20065 PF01063 Amino-transferase class IV IL332_20080 PF13335 Magnesium chelatase, subunit ChlI C-terminal IL332_20080 PF01078 Magnesium chelatase, subunit ChlI IL332_20085 PF01553 Acyltransferase IL332_20090 PF01553 Acyltransferase IL332_20105 PF00857 Isochorismatase family IL332_20110 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IL332_20110 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IL332_20115 PF01323 DSBA-like thioredoxin domain IL332_20120 PF01636 Phosphotransferase enzyme family IL332_20125 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase IL332_20125 PF12801 4Fe-4S binding domain IL332_20125 PF13746 4Fe-4S dicluster domain IL332_20130 PF06288 Protein of unknown function (DUF1040) IL332_20135 PF00563 EAL domain IL332_20135 PF01590 GAF domain IL332_20135 PF00990 Diguanylate cyclase, GGDEF domain IL332_20135 PF00360 Phytochrome region IL332_20140 PF00376 MerR family regulatory protein IL332_20140 PF09278 MerR, DNA binding IL332_20145 PF00403 Heavy-metal-associated domain IL332_20150 PF00156 Phosphoribosyl transferase domain IL332_20155 PF01138 3' exoribonuclease family, domain 1 IL332_20155 PF03725 3' exoribonuclease family, domain 2 IL332_20160 PF08340 Domain of unknown function (DUF1732) IL332_20160 PF03755 YicC-like family, N-terminal region IL332_20175 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IL332_20180 PF00535 Glycosyl transferase family 2 IL332_20185 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IL332_20190 PF01467 Cytidylyltransferase-like IL332_20195 PF04393 Protein of unknown function (DUF535) IL332_20200 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IL332_20200 PF06827 Zinc finger found in FPG and IleRS IL332_20200 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IL332_20210 PF00471 Ribosomal protein L33 IL332_20215 PF00830 Ribosomal L28 family IL332_20220 PF04002 RadC-like JAB domain IL332_20225 PF02441 Flavoprotein IL332_20225 PF04127 DNA / pantothenate metabolism flavoprotein IL332_20230 PF00692 dUTPase IL332_20235 PF00440 Bacterial regulatory proteins, tetR family IL332_20245 PF05552 Conserved TM helix IL332_20245 PF00924 Mechanosensitive ion channel IL332_20255 PF00342 Phosphoglucose isomerase IL332_20260 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IL332_20260 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IL332_20265 PF03466 LysR substrate binding domain IL332_20265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL332_20275 PF13607 Succinyl-CoA ligase like flavodoxin domain IL332_20275 PF13380 CoA binding domain IL332_20275 PF00583 Acetyltransferase (GNAT) family IL332_20305 PF12724 Flavodoxin domain IL332_20315 PF01205 Uncharacterized protein family UPF0029 IL332_20315 PF09186 Domain of unknown function (DUF1949) IL332_20320 PF00557 Metallopeptidase family M24 IL332_20325 PF13193 AMP-binding enzyme C-terminal domain IL332_20325 PF00501 AMP-binding enzyme IL332_20330 PF00378 Enoyl-CoA hydratase/isomerase IL332_20330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IL332_20330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IL332_20335 PF02803 Thiolase, C-terminal domain IL332_20335 PF00108 Thiolase, N-terminal domain IL332_20340 PF00072 Response regulator receiver domain IL332_20340 PF00486 Transcriptional regulatory protein, C terminal IL332_20345 PF00672 HAMP domain IL332_20345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_20345 PF00512 His Kinase A (phospho-acceptor) domain IL332_20350 PF01547 Bacterial extracellular solute-binding protein IL332_20360 PF01206 Sulfurtransferase TusA IL332_20365 PF01042 Endoribonuclease L-PSP IL332_20385 PF13488 Glycine zipper IL332_20385 PF00691 OmpA family IL332_20395 PF00857 Isochorismatase family IL332_20400 PF03352 Methyladenine glycosylase IL332_20405 PF02091 Glycyl-tRNA synthetase alpha subunit IL332_20410 PF05746 DALR anticodon binding domain IL332_20410 PF02092 Glycyl-tRNA synthetase beta subunit IL332_20420 PF00360 Phytochrome region IL332_20420 PF00563 EAL domain IL332_20420 PF01590 GAF domain IL332_20420 PF00990 Diguanylate cyclase, GGDEF domain IL332_20435 PF03222 Tryptophan/tyrosine permease family IL332_20445 PF01212 Beta-eliminating lyase IL332_20455 PF12801 4Fe-4S binding domain IL332_20465 PF18113 Rubredoxin binding C-terminal domain IL332_20465 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL332_20470 PF00258 Flavodoxin IL332_20470 PF00753 Metallo-beta-lactamase superfamily IL332_20470 PF00301 Rubredoxin IL332_20475 PF00158 Sigma-54 interaction domain IL332_20475 PF01590 GAF domain IL332_20480 PF00356 Bacterial regulatory proteins, lacI family IL332_20485 PF13458 Periplasmic binding protein IL332_20490 PF02653 Branched-chain amino acid transport system / permease component IL332_20495 PF02653 Branched-chain amino acid transport system / permease component IL332_20495 PF11862 Domain of unknown function (DUF3382) IL332_20500 PF00005 ABC transporter IL332_20500 PF12399 Branched-chain amino acid ATP-binding cassette transporter IL332_20505 PF00005 ABC transporter IL332_20515 PF01810 LysE type translocator IL332_20520 PF00581 Rhodanese-like domain IL332_20525 PF01694 Rhomboid family IL332_20525 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease IL332_20530 PF12262 Bacterial virulence factor lipase N-terminal IL332_20535 PF04380 Membrane fusogenic activity IL332_20540 PF00175 Oxidoreductase NAD-binding domain IL332_20555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IL332_20555 PF07498 Rho termination factor, N-terminal domain IL332_20555 PF07497 Rho termination factor, RNA-binding domain IL332_20560 PF00085 Thioredoxin IL332_20565 PF00270 DEAD/DEAH box helicase IL332_20565 PF00271 Helicase conserved C-terminal domain IL332_20570 PF02541 Ppx/GppA phosphatase family IL332_20580 PF04445 Putative SAM-dependent methyltransferase IL332_20585 PF00990 Diguanylate cyclase, GGDEF domain IL332_20585 PF00563 EAL domain IL332_20585 PF03707 Bacterial signalling protein N terminal repeat IL332_20590 PF01432 Peptidase family M3 IL332_20595 PF00490 Delta-aminolevulinic acid dehydratase IL332_20600 PF01026 TatD related DNase IL332_20605 PF00902 Sec-independent protein translocase protein (TatC) IL332_20610 PF02416 mttA/Hcf106 family IL332_20615 PF02416 mttA/Hcf106 family IL332_20620 PF03109 ABC1 family IL332_20625 PF02036 SCP-2 sterol transfer family IL332_20630 PF01209 ubiE/COQ5 methyltransferase family IL332_20635 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IL332_20640 PF07969 Amidohydrolase family IL332_20675 PF03544 Gram-negative bacterial TonB protein C-terminal IL332_20680 PF02472 Biopolymer transport protein ExbD/TolR IL332_20685 PF01618 MotA/TolQ/ExbB proton channel family IL332_20690 PF01618 MotA/TolQ/ExbB proton channel family IL332_20700 PF00196 Bacterial regulatory proteins, luxR family IL332_20700 PF03472 Autoinducer binding domain IL332_20705 PF01380 SIS domain IL332_20710 PF08220 DeoR-like helix-turn-helix domain IL332_20710 PF00455 DeoR C terminal sensor domain IL332_20715 PF00486 Transcriptional regulatory protein, C terminal IL332_20715 PF00072 Response regulator receiver domain IL332_20720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL332_20720 PF00512 His Kinase A (phospho-acceptor) domain IL332_20720 PF00672 HAMP domain IL332_20725 PF00905 Penicillin binding protein transpeptidase domain IL332_20730 PF06123 Inner membrane protein CreD IL332_20735 PF12804 MobA-like NTP transferase domain IL332_20735 PF14602 Hexapeptide repeat of succinyl-transferase IL332_20735 PF00132 Bacterial transferase hexapeptide (six repeats) IL332_20740 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IL332_20740 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IL332_20745 PF02874 ATP synthase alpha/beta family, beta-barrel domain IL332_20745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IL332_20750 PF00231 ATP synthase IL332_20755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IL332_20755 PF00306 ATP synthase alpha/beta chain, C terminal domain IL332_20755 PF02874 ATP synthase alpha/beta family, beta-barrel domain IL332_20760 PF00213 ATP synthase delta (OSCP) subunit IL332_20765 PF00430 ATP synthase B/B' CF(0) IL332_20770 PF00137 ATP synthase subunit C IL332_20775 PF00119 ATP synthase A chain IL332_20785 PF17762 HTH domain found in ParB protein IL332_20785 PF02195 ParB-like nuclease domain IL332_20790 PF13614 AAA domain IL332_20795 PF02527 rRNA small subunit methyltransferase G IL332_20800 PF01134 Glucose inhibited division protein A IL332_20800 PF13932 GidA associated domain IL332_20805 PF00258 Flavodoxin IL332_20810 PF00593 TonB dependent receptor IL332_20810 PF07715 TonB-dependent Receptor Plug Domain IL332_20815 PF00005 ABC transporter IL332_20820 PF00005 ABC transporter IL332_20825 PF01497 Periplasmic binding protein IL332_20830 PF01032 FecCD transport family IL332_20835 PF07804 HipA-like C-terminal domain IL332_20835 PF13657 HipA N-terminal domain IL332_20890 PF02899 Phage integrase, N-terminal SAM-like domain IL332_20890 PF00589 Phage integrase family IL332_20895 PF12631 MnmE helical domain IL332_20895 PF01926 50S ribosome-binding GTPase IL332_20895 PF10396 GTP-binding protein TrmE N-terminus IL332_20900 PF14849 YidC periplasmic domain IL332_20900 PF02096 60Kd inner membrane protein IL332_20905 PF01809 Putative membrane protein insertion efficiency factor IL332_20910 PF00825 Ribonuclease P IL332_20915 PF00468 Ribosomal protein L34 IL332_20920 PF00005 ABC transporter IL332_20925 PF00528 Binding-protein-dependent transport system inner membrane component IL332_20930 PF00497 Bacterial extracellular solute-binding proteins, family 3