locus-tag class description MC60_000005 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain MC60_000005 PF07703 Alpha-2-macroglobulin bait region domain MC60_000005 PF07678 A-macroglobulin TED domain MC60_000005 PF00207 Alpha-2-macroglobulin family MC60_000005 PF01835 MG2 domain MC60_000005 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain MC60_000005 PF11974 Bacterial alpha-2-macroglobulin MG3 domain MC60_000005 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain MC60_000005 PF17962 Bacterial macroglobulin domain 6 MC60_000010 PF00912 Transglycosylase MC60_000010 PF06832 Penicillin-Binding Protein C-terminus Family MC60_000010 PF00905 Penicillin binding protein transpeptidase domain MC60_000020 PF02568 Thiamine biosynthesis protein (ThiI) MC60_000020 PF02926 THUMP domain MC60_000030 PF03458 UPF0126 domain MC60_000035 PF07196 Flagellin hook IN motif MC60_000035 PF00669 Bacterial flagellin N-terminal helical region MC60_000035 PF00700 Bacterial flagellin C-terminal helical region MC60_000040 PF00669 Bacterial flagellin N-terminal helical region MC60_000040 PF00700 Bacterial flagellin C-terminal helical region MC60_000040 PF07196 Flagellin hook IN motif MC60_000050 PF02465 Flagellar hook-associated protein 2 N-terminus MC60_000050 PF07195 Flagellar hook-associated protein 2 C-terminus MC60_000050 PF07196 Flagellin hook IN motif MC60_000055 PF02561 Flagellar protein FliS MC60_000080 PF08666 SAF domain MC60_000080 PF03102 NeuB family MC60_000090 PF02348 Cytidylyltransferase MC60_000110 PF13193 AMP-binding enzyme C-terminal domain MC60_000110 PF00501 AMP-binding enzyme MC60_000125 PF00535 Glycosyl transferase family 2 MC60_000130 PF03275 UDP-galactopyranose mutase MC60_000140 PF00535 Glycosyl transferase family 2 MC60_000160 PF01209 ubiE/COQ5 methyltransferase family MC60_000165 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MC60_000170 PF02719 Polysaccharide biosynthesis protein MC60_000175 PF01497 Periplasmic binding protein MC60_000185 PF01048 Phosphorylase superfamily MC60_000195 PF02535 ZIP Zinc transporter MC60_000200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_000200 PF12729 Four helix bundle sensory module for signal transduction MC60_000200 PF00672 HAMP domain MC60_000205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC60_000210 PF00633 Helix-hairpin-helix motif MC60_000210 PF00730 HhH-GPD superfamily base excision DNA repair protein MC60_000210 PF10576 Iron-sulfur binding domain of endonuclease III MC60_000215 PF02508 Rnf-Nqr subunit, membrane protein MC60_000220 PF04205 FMN-binding domain MC60_000225 PF03116 NQR2, RnfD, RnfE family MC60_000230 PF10531 SLBB domain MC60_000230 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MC60_000230 PF12838 4Fe-4S dicluster domain MC60_000230 PF13375 RnfC Barrel sandwich hybrid domain MC60_000235 PF04060 Putative Fe-S cluster MC60_000240 PF02508 Rnf-Nqr subunit, membrane protein MC60_000245 PF00892 EamA-like transporter family MC60_000255 PF08447 PAS fold MC60_000255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_000255 PF13426 PAS domain MC60_000265 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MC60_000265 PF07055 Enoyl reductase FAD binding domain MC60_000265 PF12241 Trans-2-enoyl-CoA reductase catalytic region MC60_000270 PF03606 C4-dicarboxylate anaerobic carrier MC60_000275 PF00155 Aminotransferase class I and II MC60_000285 PF00462 Glutaredoxin MC60_000290 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family MC60_000295 PF04851 Type III restriction enzyme, res subunit MC60_000295 PF00271 Helicase conserved C-terminal domain MC60_000300 PF00529 HlyD membrane-fusion protein of T1SS MC60_000300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MC60_000305 PF11742 Protein of unknown function (DUF3302) MC60_000310 PF00924 Mechanosensitive ion channel MC60_000310 PF12795 Mechanosensitive ion channel porin domain MC60_000310 PF12794 Mechanosensitive ion channel inner membrane domain 1 MC60_000315 PF02554 Carbon starvation protein CstA MC60_000320 PF04397 LytTr DNA-binding domain MC60_000320 PF00072 Response regulator receiver domain MC60_000325 PF06580 Histidine kinase MC60_000325 PF07694 5TMR of 5TMR-LYT MC60_000330 PF00072 Response regulator receiver domain MC60_000335 PF00171 Aldehyde dehydrogenase family MC60_000335 PF00465 Iron-containing alcohol dehydrogenase MC60_000340 PF01914 MarC family integral membrane protein MC60_000345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC60_000350 PF00528 Binding-protein-dependent transport system inner membrane component MC60_000355 PF00528 Binding-protein-dependent transport system inner membrane component MC60_000355 PF12911 N-terminal TM domain of oligopeptide transport permease C MC60_000360 PF00005 ABC transporter MC60_000360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC60_000365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC60_000365 PF00005 ABC transporter MC60_000370 PF03741 Integral membrane protein TerC family MC60_000375 PF00842 Alanine racemase, C-terminal domain MC60_000375 PF01168 Alanine racemase, N-terminal domain MC60_000385 PF00375 Sodium:dicarboxylate symporter family MC60_000405 PF01979 Amidohydrolase family MC60_000415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_000415 PF00672 HAMP domain MC60_000420 PF01230 HIT domain MC60_000455 PF07549 SecD/SecF GG Motif MC60_000455 PF13721 SecD export protein N-terminal TM region MC60_000455 PF02355 Protein export membrane protein MC60_000460 PF07549 SecD/SecF GG Motif MC60_000460 PF02355 Protein export membrane protein MC60_000475 PF05661 Protein of unknown function (DUF808) MC60_000480 PF08439 Oligopeptidase F MC60_000480 PF01432 Peptidase family M3 MC60_000485 PF08439 Oligopeptidase F MC60_000485 PF01432 Peptidase family M3 MC60_000490 PF05728 Uncharacterised protein family (UPF0227) MC60_000495 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC60_000505 PF01906 Putative heavy-metal-binding MC60_000510 PF00884 Sulfatase MC60_000520 PF00696 Amino acid kinase family MC60_000520 PF01842 ACT domain MC60_000525 PF00696 Amino acid kinase family MC60_000525 PF00583 Acetyltransferase (GNAT) family MC60_000530 PF01625 Peptide methionine sulfoxide reductase MC60_000555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_000555 PF03466 LysR substrate binding domain MC60_000560 PF02652 L-lactate permease MC60_000565 PF02754 Cysteine-rich domain MC60_000570 PF02589 LUD domain MC60_000570 PF11870 Domain of unknown function (DUF3390) MC60_000570 PF13183 4Fe-4S dicluster domain MC60_000575 PF02589 LUD domain MC60_000580 PF02913 FAD linked oxidases, C-terminal domain MC60_000580 PF01565 FAD binding domain MC60_000595 PF05598 Transposase domain (DUF772) MC60_000595 PF01609 Transposase DDE domain MC60_000615 PF00005 ABC transporter MC60_000625 PF03600 Citrate transporter MC60_000635 PF07690 Major Facilitator Superfamily MC60_000655 PF01593 Flavin containing amine oxidoreductase MC60_000660 PF03239 Iron permease FTR1 family MC60_000690 PF14403 Circularly permuted ATP-grasp type 2 MC60_000690 PF04168 A predicted alpha-helical domain with a conserved ER motif. MC60_000695 PF14403 Circularly permuted ATP-grasp type 2 MC60_000715 PF00916 Sulfate permease family MC60_000715 PF01740 STAS domain MC60_000735 PF05638 Type VI secretion system effector, Hcp MC60_000740 PF04717 Type VI secretion system, phage-baseplate injector MC60_000750 PF05593 RHS Repeat MC60_000750 PF03527 RHS protein MC60_000755 PF00665 Integrase core domain MC60_000810 PF17871 AAA lid domain MC60_000810 PF10431 C-terminal, D2-small domain, of ClpB protein MC60_000810 PF07724 AAA domain (Cdc48 subfamily) MC60_000810 PF00004 ATPase family associated with various cellular activities (AAA) MC60_000815 PF02954 Bacterial regulatory protein, Fis family MC60_000815 PF00158 Sigma-54 interaction domain MC60_000815 PF02830 V4R domain MC60_000815 PF06505 Activator of aromatic catabolism MC60_000845 PF04717 Type VI secretion system, phage-baseplate injector MC60_000850 PF13457 GW (Gly-Tryp) dipeptide domain MC60_000850 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MC60_000855 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal MC60_000855 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MC60_000860 PF13247 4Fe-4S dicluster domain MC60_000865 PF03916 Polysulphide reductase, NrfD MC60_000870 PF00374 Nickel-dependent hydrogenase MC60_000875 PF01750 Hydrogenase maturation protease MC60_000880 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE MC60_000885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC60_000890 PF00528 Binding-protein-dependent transport system inner membrane component MC60_000895 PF12911 N-terminal TM domain of oligopeptide transport permease C MC60_000895 PF00528 Binding-protein-dependent transport system inner membrane component MC60_000900 PF00005 ABC transporter MC60_000905 PF00005 ABC transporter MC60_000910 PF02492 CobW/HypB/UreG, nucleotide-binding domain MC60_000915 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MC60_000920 PF00586 AIR synthase related protein, N-terminal domain MC60_000920 PF02769 AIR synthase related protein, C-terminal domain MC60_000925 PF01924 Hydrogenase formation hypA family MC60_000930 PF01455 HupF/HypC family MC60_000935 PF01300 Telomere recombination MC60_000935 PF17788 HypF Kae1-like domain MC60_000935 PF00708 Acylphosphatase MC60_000935 PF07503 HypF finger MC60_000940 PF02705 K+ potassium transporter MC60_000945 PF13662 Toprim domain MC60_000945 PF02132 RecR protein MC60_000950 PF00183 Hsp90 protein MC60_000950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_000955 PF05191 Adenylate kinase, active site lid MC60_000960 PF00762 Ferrochelatase MC60_000965 PF01124 MAPEG family MC60_000970 PF00294 pfkB family carbohydrate kinase MC60_000975 PF17200 Single Cache domain 2 MC60_000975 PF00672 HAMP domain MC60_000975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_000990 PF03707 Bacterial signalling protein N terminal repeat MC60_000990 PF00563 EAL domain MC60_000990 PF00990 Diguanylate cyclase, GGDEF domain MC60_000995 PF00483 Nucleotidyl transferase MC60_001005 PF07273 Protein of unknown function (DUF1439) MC60_001010 PF00425 chorismate binding enzyme MC60_001015 PF00501 AMP-binding enzyme MC60_001015 PF13193 AMP-binding enzyme C-terminal domain MC60_001020 PF00550 Phosphopantetheine attachment site MC60_001020 PF00857 Isochorismatase family MC60_001025 PF00501 AMP-binding enzyme MC60_001025 PF00668 Condensation domain MC60_001025 PF00550 Phosphopantetheine attachment site MC60_001025 PF00975 Thioesterase domain MC60_001025 PF13193 AMP-binding enzyme C-terminal domain MC60_001035 PF00550 Phosphopantetheine attachment site MC60_001035 PF07993 Male sterility protein MC60_001035 PF00668 Condensation domain MC60_001035 PF00501 AMP-binding enzyme MC60_001035 PF13193 AMP-binding enzyme C-terminal domain MC60_001040 PF13193 AMP-binding enzyme C-terminal domain MC60_001040 PF14765 Polyketide synthase dehydratase MC60_001040 PF16197 Ketoacyl-synthetase C-terminal extension MC60_001040 PF00109 Beta-ketoacyl synthase, N-terminal domain MC60_001040 PF02801 Beta-ketoacyl synthase, C-terminal domain MC60_001040 PF00501 AMP-binding enzyme MC60_001040 PF08659 KR domain MC60_001040 PF00668 Condensation domain MC60_001040 PF00550 Phosphopantetheine attachment site MC60_001045 PF01497 Periplasmic binding protein MC60_001050 PF17837 4'-phosphopantetheinyl transferase N-terminal domain MC60_001050 PF01648 4'-phosphopantetheinyl transferase superfamily MC60_001055 PF00005 ABC transporter MC60_001060 PF01032 FecCD transport family MC60_001065 PF01032 FecCD transport family MC60_001070 PF00593 TonB dependent receptor MC60_001070 PF07715 TonB-dependent Receptor Plug Domain MC60_001085 PF11143 Protein of unknown function (DUF2919) MC60_001090 PF01544 CorA-like Mg2+ transporter protein MC60_001100 PF01012 Electron transfer flavoprotein domain MC60_001105 PF01012 Electron transfer flavoprotein domain MC60_001105 PF00766 Electron transfer flavoprotein FAD-binding domain MC60_001110 PF00266 Aminotransferase class-V MC60_001115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MC60_001120 PF00793 DAHP synthetase I family MC60_001125 PF03741 Integral membrane protein TerC family MC60_001135 PF08891 YfcL protein MC60_001140 PF00501 AMP-binding enzyme MC60_001145 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region MC60_001145 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MC60_001150 PF04172 LrgB-like family MC60_001155 PF03788 LrgA family MC60_001170 PF08411 Exonuclease C-terminal MC60_001170 PF00929 Exonuclease MC60_001225 PF00288 GHMP kinases N terminal domain MC60_001225 PF08544 GHMP kinases C terminal MC60_001225 PF10509 Galactokinase galactose-binding signature MC60_001230 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain MC60_001230 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain MC60_001235 PF16363 GDP-mannose 4,6 dehydratase MC60_001240 PF00356 Bacterial regulatory proteins, lacI family MC60_001245 PF02264 LamB porin MC60_001250 PF07745 Glycosyl hydrolase family 53 MC60_001260 PF00672 HAMP domain MC60_001260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_001260 PF02743 Cache domain MC60_001265 PF00005 ABC transporter MC60_001265 PF17912 MalK OB fold domain MC60_001270 PF13416 Bacterial extracellular solute-binding protein MC60_001275 PF00528 Binding-protein-dependent transport system inner membrane component MC60_001280 PF00528 Binding-protein-dependent transport system inner membrane component MC60_001285 PF07745 Glycosyl hydrolase family 53 MC60_001290 PF02449 Beta-galactosidase MC60_001290 PF08532 Beta-galactosidase trimerisation domain MC60_001290 PF08533 Beta-galactosidase C-terminal domain MC60_001295 PF02378 Phosphotransferase system, EIIC MC60_001295 PF00367 phosphotransferase system, EIIB MC60_001300 PF07745 Glycosyl hydrolase family 53 MC60_001305 PF00224 Pyruvate kinase, barrel domain MC60_001305 PF02887 Pyruvate kinase, alpha/beta domain MC60_001325 PF00350 Dynamin family MC60_001330 PF13990 YjcZ-like protein MC60_001365 PF00149 Calcineurin-like phosphoesterase MC60_001370 PF03706 Lysylphosphatidylglycerol synthase TM region MC60_001370 PF09924 Uncharacterised conserved protein (DUF2156) MC60_001380 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC60_001385 PF00795 Carbon-nitrogen hydrolase MC60_001390 PF00155 Aminotransferase class I and II MC60_001395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_001395 PF03466 LysR substrate binding domain MC60_001400 PF11762 L-arabinose isomerase C-terminal domain MC60_001400 PF02610 L-arabinose isomerase MC60_001405 PF00596 Class II Aldolase and Adducin N-terminal domain MC60_001410 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MC60_001415 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MC60_001420 PF00005 ABC transporter MC60_001425 PF02653 Branched-chain amino acid transport system / permease component MC60_001430 PF12833 Helix-turn-helix domain MC60_001430 PF02311 AraC-like ligand binding domain MC60_001435 PF00444 Ribosomal protein L36 MC60_001440 PF01197 Ribosomal protein L31 MC60_001455 PF01863 Protein of unknown function DUF45 MC60_001470 PF03606 C4-dicarboxylate anaerobic carrier MC60_001480 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MC60_001480 PF01266 FAD dependent oxidoreductase MC60_001485 PF02801 Beta-ketoacyl synthase, C-terminal domain MC60_001485 PF00109 Beta-ketoacyl synthase, N-terminal domain MC60_001500 PF00285 Citrate synthase, C-terminal domain MC60_001505 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MC60_001510 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MC60_001515 PF02910 Fumarate reductase flavoprotein C-term MC60_001515 PF00890 FAD binding domain MC60_001520 PF13085 2Fe-2S iron-sulfur cluster binding domain MC60_001525 PF16078 2-oxoglutarate dehydrogenase N-terminus MC60_001525 PF00676 Dehydrogenase E1 component MC60_001525 PF16870 2-oxoglutarate dehydrogenase C-terminal MC60_001525 PF02779 Transketolase, pyrimidine binding domain MC60_001530 PF00364 Biotin-requiring enzyme MC60_001530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MC60_001530 PF02817 e3 binding domain MC60_001535 PF00549 CoA-ligase MC60_001535 PF08442 ATP-grasp domain MC60_001540 PF00549 CoA-ligase MC60_001540 PF02629 CoA binding domain MC60_001555 PF03692 Putative zinc- or iron-chelating domain MC60_001560 PF01228 Glycine radical MC60_001560 PF02901 Pyruvate formate lyase-like MC60_001565 PF01226 Formate/nitrite transporter MC60_001570 PF18381 YcaO cyclodehydratase C-terminal domain MC60_001570 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding MC60_001580 PF00893 Small Multidrug Resistance protein MC60_001585 PF02774 Semialdehyde dehydrogenase, dimerisation domain MC60_001585 PF01118 Semialdehyde dehydrogenase, NAD binding domain MC60_001590 PF00313 'Cold-shock' DNA-binding domain MC60_001595 PF02617 ATP-dependent Clp protease adaptor protein ClpS MC60_001600 PF17871 AAA lid domain MC60_001600 PF02861 Clp amino terminal domain, pathogenicity island component MC60_001600 PF10431 C-terminal, D2-small domain, of ClpB protein MC60_001600 PF07724 AAA domain (Cdc48 subfamily) MC60_001600 PF00004 ATPase family associated with various cellular activities (AAA) MC60_001605 PF01176 Translation initiation factor 1A / IF-1 MC60_001610 PF04376 Arginine-tRNA-protein transferase, N terminus MC60_001610 PF04377 Arginine-tRNA-protein transferase, C terminus MC60_001615 PF03588 Leucyl/phenylalanyl-tRNA protein transferase MC60_001620 PF05433 Glycine zipper 2TM domain MC60_001625 PF00990 Diguanylate cyclase, GGDEF domain MC60_001625 PF05230 MASE2 domain MC60_001630 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC60_001635 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MC60_001635 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MC60_001640 PF01037 Lrp/AsnC ligand binding domain MC60_001645 PF17854 FtsK alpha domain MC60_001645 PF09397 Ftsk gamma domain MC60_001645 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MC60_001645 PF01580 FtsK/SpoIIIE family MC60_001650 PF03548 Outer membrane lipoprotein carrier protein LolA MC60_001655 PF00004 ATPase family associated with various cellular activities (AAA) MC60_001655 PF16193 AAA C-terminal domain MC60_001655 PF12002 MgsA AAA+ ATPase C terminal MC60_001665 PF02403 Seryl-tRNA synthetase N-terminal domain MC60_001665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MC60_001670 PF02674 Colicin V production protein MC60_001675 PF00156 Phosphoribosyl transferase domain MC60_001680 PF00232 Glycosyl hydrolase family 1 MC60_001685 PF00367 phosphotransferase system, EIIB MC60_001685 PF02378 Phosphotransferase system, EIIC MC60_001690 PF00356 Bacterial regulatory proteins, lacI family MC60_001695 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) MC60_001700 PF00005 ABC transporter MC60_001705 PF00005 ABC transporter MC60_001705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC60_001710 PF12911 N-terminal TM domain of oligopeptide transport permease C MC60_001710 PF00528 Binding-protein-dependent transport system inner membrane component MC60_001715 PF00528 Binding-protein-dependent transport system inner membrane component MC60_001720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC60_001725 PF02954 Bacterial regulatory protein, Fis family MC60_001725 PF00158 Sigma-54 interaction domain MC60_001730 PF04012 PspA/IM30 family MC60_001735 PF06667 Phage shock protein B MC60_001745 PF04317 YcjX-like family, DUF463 MC60_001750 PF05128 Domain of unknown function (DUF697) MC60_001755 PF00351 Biopterin-dependent aromatic amino acid hydroxylase MC60_001760 PF01329 Pterin 4 alpha carbinolamine dehydratase MC60_001765 PF00158 Sigma-54 interaction domain MC60_001765 PF18024 Helix-turn-helix domain MC60_001770 PF13689 YfiR/HmsC-like MC60_001775 PF03707 Bacterial signalling protein N terminal repeat MC60_001775 PF00563 EAL domain MC60_001775 PF00990 Diguanylate cyclase, GGDEF domain MC60_001780 PF00691 OmpA family MC60_001785 PF04055 Radical SAM superfamily MC60_001790 PF13742 OB-fold nucleic acid binding domain MC60_001790 PF02601 Exonuclease VII, large subunit MC60_001800 PF02472 Biopolymer transport protein ExbD/TolR MC60_001805 PF01618 MotA/TolQ/ExbB proton channel family MC60_001815 PF00128 Alpha amylase, catalytic domain MC60_001815 PF03423 Carbohydrate binding domain (family 25) MC60_001815 PF01373 Glycosyl hydrolase family 14 MC60_001825 PF00478 IMP dehydrogenase / GMP reductase domain MC60_001825 PF00571 CBS domain MC60_001830 PF00958 GMP synthase C terminal domain MC60_001830 PF00117 Glutamine amidotransferase class-I MC60_001830 PF02540 NAD synthase MC60_001840 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MC60_001840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MC60_001840 PF02805 Metal binding domain of Ada MC60_001840 PF12833 Helix-turn-helix domain MC60_001860 PF01047 MarR family MC60_001870 PF05724 Thiopurine S-methyltransferase (TPMT) MC60_001875 PF16187 Middle or third domain of peptidase_M16 MC60_001875 PF05193 Peptidase M16 inactive domain MC60_001875 PF00675 Insulinase (Peptidase family M16) MC60_001880 PF00300 Histidine phosphatase superfamily (branch 1) MC60_001890 PF00892 EamA-like transporter family MC60_001895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC60_001900 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MC60_001905 PF00270 DEAD/DEAH box helicase MC60_001905 PF00271 Helicase conserved C-terminal domain MC60_001905 PF02559 CarD-like/TRCF domain MC60_001905 PF17757 UvrB interaction domain MC60_001905 PF03461 TRCF domain MC60_001915 PF12704 MacB-like periplasmic core domain MC60_001915 PF02687 FtsX-like permease family MC60_001920 PF00005 ABC transporter MC60_001925 PF02687 FtsX-like permease family MC60_001925 PF12704 MacB-like periplasmic core domain MC60_001945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MC60_001945 PF05698 Bacterial trigger factor protein (TF) C-terminus MC60_001945 PF05697 Bacterial trigger factor protein (TF) MC60_001950 PF00574 Clp protease MC60_001955 PF06689 ClpX C4-type zinc finger MC60_001955 PF10431 C-terminal, D2-small domain, of ClpB protein MC60_001955 PF07724 AAA domain (Cdc48 subfamily) MC60_001960 PF02190 ATP-dependent protease La (LON) substrate-binding domain MC60_001960 PF00004 ATPase family associated with various cellular activities (AAA) MC60_001960 PF05362 Lon protease (S16) C-terminal proteolytic domain MC60_001965 PF00216 Bacterial DNA-binding protein MC60_001970 PF13145 PPIC-type PPIASE domain MC60_001975 PF00005 ABC transporter MC60_001975 PF12848 ABC transporter MC60_001980 PF00474 Sodium:solute symporter family MC60_001985 PF04341 Protein of unknown function, DUF485 MC60_002000 PF00378 Enoyl-CoA hydratase/isomerase MC60_002005 PF01235 Sodium:alanine symporter family MC60_002015 PF06167 Glucose-regulated metallo-peptidase M90 MC60_002020 PF01184 GPR1/FUN34/yaaH family MC60_002030 PF00376 MerR family regulatory protein MC60_002030 PF09278 MerR, DNA binding MC60_002035 PF00682 HMGL-like MC60_002040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MC60_002040 PF00364 Biotin-requiring enzyme MC60_002040 PF00289 Biotin carboxylase, N-terminal domain MC60_002040 PF02785 Biotin carboxylase C-terminal domain MC60_002045 PF00378 Enoyl-CoA hydratase/isomerase MC60_002050 PF01039 Carboxyl transferase domain MC60_002055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MC60_002055 PF02770 Acyl-CoA dehydrogenase, middle domain MC60_002055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MC60_002060 PF00171 Aldehyde dehydrogenase family MC60_002065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MC60_002065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MC60_002065 PF02770 Acyl-CoA dehydrogenase, middle domain MC60_002070 PF00378 Enoyl-CoA hydratase/isomerase MC60_002075 PF00378 Enoyl-CoA hydratase/isomerase MC60_002080 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MC60_002080 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MC60_002090 PF13520 Amino acid permease MC60_002095 PF01925 Sulfite exporter TauE/SafE MC60_002115 PF05598 Transposase domain (DUF772) MC60_002115 PF01609 Transposase DDE domain MC60_002120 PF12706 Beta-lactamase superfamily domain MC60_002125 PF02653 Branched-chain amino acid transport system / permease component MC60_002130 PF02653 Branched-chain amino acid transport system / permease component MC60_002135 PF00005 ABC transporter MC60_002140 PF13407 Periplasmic binding protein domain MC60_002145 PF03466 LysR substrate binding domain MC60_002145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_002160 PF02634 FdhD/NarQ family MC60_002165 PF00384 Molybdopterin oxidoreductase MC60_002170 PF00990 Diguanylate cyclase, GGDEF domain MC60_002170 PF00072 Response regulator receiver domain MC60_002175 PF03466 LysR substrate binding domain MC60_002175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_002180 PF00232 Glycosyl hydrolase family 1 MC60_002190 PF03466 LysR substrate binding domain MC60_002190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_002200 PF00933 Glycosyl hydrolase family 3 N terminal domain MC60_002205 PF01261 Xylose isomerase-like TIM barrel MC60_002210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MC60_002210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MC60_002215 PF03466 LysR substrate binding domain MC60_002215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_002225 PF03279 Bacterial lipid A biosynthesis acyltransferase MC60_002230 PF03279 Bacterial lipid A biosynthesis acyltransferase MC60_002240 PF02678 Pirin MC60_002240 PF05726 Pirin C-terminal cupin domain MC60_002245 PF00136 DNA polymerase family B MC60_002245 PF03104 DNA polymerase family B, exonuclease domain MC60_002275 PF01554 MatE MC60_002280 PF06786 Uncharacterised protein family (UPF0253) MC60_002285 PF00677 Lumazine binding domain MC60_002300 PF13419 Haloacid dehalogenase-like hydrolase MC60_002305 PF02222 ATP-grasp domain MC60_002305 PF01370 NAD dependent epimerase/dehydratase family MC60_002310 PF00892 EamA-like transporter family MC60_002315 PF02525 Flavodoxin-like fold MC60_002340 PF17783 CvfB-like winged helix domain MC60_002340 PF13509 S1 domain MC60_002350 PF04269 Protein of unknown function, DUF440 MC60_002360 PF00912 Transglycosylase MC60_002365 PF04269 Protein of unknown function, DUF440 MC60_002370 PF03776 Septum formation topological specificity factor MinE MC60_002375 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MC60_002380 PF05209 Septum formation inhibitor MinC, N-terminal domain MC60_002380 PF03775 Septum formation inhibitor MinC, C-terminal domain MC60_002385 PF05166 YcgL domain MC60_002390 PF13406 Transglycosylase SLT domain MC60_002395 PF03315 Serine dehydratase beta chain MC60_002395 PF03313 Serine dehydratase alpha chain MC60_002405 PF03313 Serine dehydratase alpha chain MC60_002405 PF03315 Serine dehydratase beta chain MC60_002410 PF06865 Pyrimidine/purine nucleoside phosphorylase MC60_002415 PF00375 Sodium:dicarboxylate symporter family MC60_002420 PF00376 MerR family regulatory protein MC60_002420 PF09278 MerR, DNA binding MC60_002425 PF00108 Thiolase, N-terminal domain MC60_002425 PF02803 Thiolase, C-terminal domain MC60_002430 PF00563 EAL domain MC60_002430 PF08668 HDOD domain MC60_002435 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MC60_002440 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MC60_002450 PF04542 Sigma-70 region 2 MC60_002450 PF08281 Sigma-70, region 4 MC60_002475 PF01882 Protein of unknown function DUF58 MC60_002480 PF17863 AAA lid domain MC60_002480 PF07726 ATPase family associated with various cellular activities (AAA) MC60_002485 PF00108 Thiolase, N-terminal domain MC60_002485 PF02803 Thiolase, C-terminal domain MC60_002490 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MC60_002490 PF00378 Enoyl-CoA hydratase/isomerase MC60_002490 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MC60_002500 PF07152 YaeQ protein MC60_002510 PF07690 Major Facilitator Superfamily MC60_002515 PF00005 ABC transporter MC60_002520 PF01032 FecCD transport family MC60_002535 PF05433 Glycine zipper 2TM domain MC60_002540 PF00501 AMP-binding enzyme MC60_002540 PF13193 AMP-binding enzyme C-terminal domain MC60_002545 PF08279 HTH domain MC60_002545 PF13280 WYL domain MC60_002555 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MC60_002555 PF01502 Phosphoribosyl-AMP cyclohydrolase MC60_002560 PF00977 Histidine biosynthesis protein MC60_002565 PF00512 His Kinase A (phospho-acceptor) domain MC60_002565 PF01627 Hpt domain MC60_002565 PF00072 Response regulator receiver domain MC60_002565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_002575 PF00072 Response regulator receiver domain MC60_002580 PF00977 Histidine biosynthesis protein MC60_002585 PF00117 Glutamine amidotransferase class-I MC60_002590 PF00475 Imidazoleglycerol-phosphate dehydratase MC60_002590 PF08645 Polynucleotide kinase 3 phosphatase MC60_002595 PF00155 Aminotransferase class I and II MC60_002600 PF00815 Histidinol dehydrogenase MC60_002605 PF01634 ATP phosphoribosyltransferase MC60_002605 PF08029 HisG, C-terminal domain MC60_002615 PF04851 Type III restriction enzyme, res subunit MC60_002615 PF13307 Helicase C-terminal domain MC60_002620 PF00814 Glycoprotease family MC60_002630 PF00561 alpha/beta hydrolase fold MC60_002635 PF13193 AMP-binding enzyme C-terminal domain MC60_002635 PF00501 AMP-binding enzyme MC60_002640 PF01612 3'-5' exonuclease MC60_002640 PF00570 HRDC domain MC60_002650 PF00892 EamA-like transporter family MC60_002660 PF01207 Dihydrouridine synthase (Dus) MC60_002665 PF04304 Protein of unknown function (DUF454) MC60_002670 PF00156 Phosphoribosyl transferase domain MC60_002675 PF12170 DNA polymerase III tau subunit V interacting with alpha MC60_002675 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MC60_002675 PF12169 DNA polymerase III subunits gamma and tau domain III MC60_002680 PF02575 YbaB/EbfC DNA-binding family MC60_002685 PF03466 LysR substrate binding domain MC60_002685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_002690 PF02678 Pirin MC60_002690 PF05726 Pirin C-terminal cupin domain MC60_002700 PF00196 Bacterial regulatory proteins, luxR family MC60_002700 PF00072 Response regulator receiver domain MC60_002710 PF04408 Helicase associated domain (HA2) MC60_002710 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MC60_002710 PF00271 Helicase conserved C-terminal domain MC60_002710 PF11898 Domain of unknown function (DUF3418) MC60_002710 PF00270 DEAD/DEAH box helicase MC60_002720 PF01386 Ribosomal L25p family MC60_002730 PF00072 Response regulator receiver domain MC60_002735 PF00753 Metallo-beta-lactamase superfamily MC60_002745 PF00586 AIR synthase related protein, N-terminal domain MC60_002745 PF02769 AIR synthase related protein, C-terminal domain MC60_002770 PF17785 PUA-like domain MC60_002770 PF10672 S-adenosylmethionine-dependent methyltransferase MC60_002775 PF00672 HAMP domain MC60_002775 PF12729 Four helix bundle sensory module for signal transduction MC60_002775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_002780 PF00708 Acylphosphatase MC60_002785 PF00043 Glutathione S-transferase, C-terminal domain MC60_002785 PF02798 Glutathione S-transferase, N-terminal domain MC60_002790 PF08264 Anticodon-binding domain of tRNA MC60_002790 PF01588 Putative tRNA binding domain MC60_002790 PF09334 tRNA synthetases class I (M) MC60_002795 PF10609 NUBPL iron-transfer P-loop NTPase MC60_002800 PF00485 Phosphoribulokinase / Uridine kinase family MC60_002805 PF00692 dUTPase MC60_002810 PF01384 Phosphate transporter family MC60_002815 PF12111 Polyribonucleotide phosphorylase C terminal MC60_002815 PF00575 S1 RNA binding domain MC60_002815 PF10150 Ribonuclease E/G family MC60_002820 PF01479 S4 domain MC60_002820 PF00849 RNA pseudouridylate synthase MC60_002825 PF02545 Maf-like protein MC60_002835 PF02620 Large ribosomal RNA subunit accumulation protein YceD MC60_002840 PF01783 Ribosomal L32p protein family MC60_002845 PF02504 Fatty acid synthesis protein MC60_002850 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MC60_002850 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MC60_002855 PF00698 Acyl transferase domain MC60_002865 PF00550 Phosphopantetheine attachment site MC60_002870 PF02801 Beta-ketoacyl synthase, C-terminal domain MC60_002870 PF00109 Beta-ketoacyl synthase, N-terminal domain MC60_002875 PF01063 Amino-transferase class IV MC60_002880 PF02618 YceG-like family MC60_002885 PF02223 Thymidylate kinase MC60_002890 PF09115 DNA polymerase III, delta subunit, C terminal MC60_002895 PF01026 TatD related DNase MC60_002900 PF00589 Phage integrase family MC60_002910 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF MC60_002910 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF MC60_002910 PF01189 16S rRNA methyltransferase RsmB/F MC60_002915 PF02470 MlaD protein MC60_002920 PF04403 Paraquat-inducible protein A MC60_002930 PF07130 YebG protein MC60_002940 PF13654 AAA domain MC60_002940 PF05362 Lon protease (S16) C-terminal proteolytic domain MC60_002945 PF07977 FabA-like domain MC60_002950 PF04957 Ribosome modulation factor MC60_002970 PF01170 Putative RNA methylase family UPF0020 MC60_002970 PF02926 THUMP domain MC60_002970 PF10672 S-adenosylmethionine-dependent methyltransferase MC60_002975 PF07126 Cell-division protein ZapC MC60_002980 PF01180 Dihydroorotate dehydrogenase MC60_002985 PF05088 Bacterial NAD-glutamate dehydrogenase MC60_002995 PF01433 Peptidase family M1 domain MC60_002995 PF11940 Domain of unknown function (DUF3458) Ig-like fold MC60_002995 PF17432 Domain of unknown function (DUF3458_C) ARM repeats MC60_003000 PF03572 Peptidase family S41 MC60_003000 PF11818 C-terminal domain of tail specific protease (DUF3340) MC60_003000 PF17804 Tail specific protease N-terminal domain MC60_003000 PF00595 PDZ domain MC60_003005 PF17516 ProQ C-terminal domain MC60_003005 PF04352 ProQ/FINO family MC60_003010 PF13185 GAF domain MC60_003020 PF00115 Cytochrome C and Quinol oxidase polypeptide I MC60_003035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MC60_003035 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP MC60_003045 PF00403 Heavy-metal-associated domain MC60_003060 PF00027 Cyclic nucleotide-binding domain MC60_003060 PF13545 Crp-like helix-turn-helix domain MC60_003065 PF00582 Universal stress protein family MC60_003070 PF01171 PP-loop family MC60_003085 PF02798 Glutathione S-transferase, N-terminal domain MC60_003085 PF00043 Glutathione S-transferase, C-terminal domain MC60_003090 PF05025 RbsD / FucU transport protein family MC60_003095 PF00005 ABC transporter MC60_003100 PF02653 Branched-chain amino acid transport system / permease component MC60_003105 PF13407 Periplasmic binding protein domain MC60_003110 PF00294 pfkB family carbohydrate kinase MC60_003115 PF00356 Bacterial regulatory proteins, lacI family MC60_003120 PF03707 Bacterial signalling protein N terminal repeat MC60_003120 PF00563 EAL domain MC60_003120 PF00990 Diguanylate cyclase, GGDEF domain MC60_003130 PF02146 Sir2 family MC60_003145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_003145 PF00072 Response regulator receiver domain MC60_003145 PF09456 RcsC Alpha-Beta-Loop (ABL) MC60_003145 PF00512 His Kinase A (phospho-acceptor) domain MC60_003150 PF00216 Bacterial DNA-binding protein MC60_003155 PF03483 B3/4 domain MC60_003155 PF03484 tRNA synthetase B5 domain MC60_003155 PF03147 Ferredoxin-fold anticodon binding domain MC60_003155 PF01588 Putative tRNA binding domain MC60_003155 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MC60_003160 PF01409 tRNA synthetases class II core domain (F) MC60_003160 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MC60_003165 PF00453 Ribosomal protein L20 MC60_003170 PF01632 Ribosomal protein L35 MC60_003175 PF05198 Translation initiation factor IF-3, N-terminal domain MC60_003175 PF00707 Translation initiation factor IF-3, C-terminal domain MC60_003180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MC60_003180 PF03129 Anticodon binding domain MC60_003180 PF02824 TGS domain MC60_003180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MC60_003195 PF04055 Radical SAM superfamily MC60_003200 PF03989 DNA gyrase C-terminal domain, beta-propeller MC60_003200 PF00521 DNA gyrase/topoisomerase IV, subunit A MC60_003210 PF13419 Haloacid dehalogenase-like hydrolase MC60_003215 PF03477 ATP cone domain MC60_003215 PF02867 Ribonucleotide reductase, barrel domain MC60_003215 PF00317 Ribonucleotide reductase, all-alpha domain MC60_003220 PF00268 Ribonucleotide reductase, small chain MC60_003225 PF00111 2Fe-2S iron-sulfur cluster binding domain MC60_003230 PF06725 3D domain MC60_003230 PF03562 MltA specific insert domain MC60_003235 PF06945 Protein of unknown function (DUF1289) MC60_003240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MC60_003240 PF02378 Phosphotransferase system, EIIC MC60_003245 PF00294 pfkB family carbohydrate kinase MC60_003250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MC60_003250 PF00381 PTS HPr component phosphorylation site MC60_003255 PF00356 Bacterial regulatory proteins, lacI family MC60_003255 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MC60_003260 PF03222 Tryptophan/tyrosine permease family MC60_003275 PF00270 DEAD/DEAH box helicase MC60_003275 PF00271 Helicase conserved C-terminal domain MC60_003285 PF01264 Chorismate synthase MC60_003290 PF05175 Methyltransferase small domain MC60_003295 PF01713 Smr domain MC60_003320 PF08329 Chitinase A, N-terminal domain MC60_003320 PF00704 Glycosyl hydrolases family 18 MC60_003330 PF08274 PhnA Zinc-Ribbon MC60_003330 PF03831 PhnA domain MC60_003340 PF01810 LysE type translocator MC60_003365 PF01791 DeoC/LacD family aldolase MC60_003370 PF01773 Na+ dependent nucleoside transporter N-terminus MC60_003370 PF07662 Na+ dependent nucleoside transporter C-terminus MC60_003370 PF07670 Nucleoside recognition MC60_003375 PF01048 Phosphorylase superfamily MC60_003380 PF03466 LysR substrate binding domain MC60_003380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_003400 PF03330 Lytic transglycolase MC60_003415 PF16330 MukB hinge domain MC60_003415 PF04310 MukB N-terminal MC60_003420 PF04288 MukE-like family MC60_003425 PF03882 MukF winged-helix domain MC60_003425 PF17193 MukF C-terminal domain MC60_003425 PF17192 MukF middle domain MC60_003435 PF02698 DUF218 domain MC60_003440 PF00121 Triosephosphate isomerase MC60_003445 PF00365 Phosphofructokinase MC60_003450 PF01546 Peptidase family M20/M25/M40 MC60_003450 PF07687 Peptidase dimerisation domain MC60_003455 PF13419 Haloacid dehalogenase-like hydrolase MC60_003460 PF00883 Cytosol aminopeptidase family, catalytic domain MC60_003460 PF02789 Cytosol aminopeptidase family, N-terminal domain MC60_003500 PF11398 Protein of unknown function (DUF2813) MC60_003515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_003515 PF03466 LysR substrate binding domain MC60_003520 PF01925 Sulfite exporter TauE/SafE MC60_003535 PF07478 D-ala D-ala ligase C-terminus MC60_003535 PF01820 D-ala D-ala ligase N-terminus MC60_003545 PF00255 Glutathione peroxidase MC60_003550 PF00270 DEAD/DEAH box helicase MC60_003550 PF00271 Helicase conserved C-terminal domain MC60_003565 PF02694 Uncharacterised BCR, YnfA/UPF0060 family MC60_003575 PF01928 CYTH domain MC60_003585 PF13673 Acetyltransferase (GNAT) domain MC60_003590 PF03992 Antibiotic biosynthesis monooxygenase MC60_003595 PF08543 Phosphomethylpyrimidine kinase MC60_003615 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus MC60_003615 PF00561 alpha/beta hydrolase fold MC60_003620 PF01575 MaoC like domain MC60_003650 PF00005 ABC transporter MC60_003650 PF00664 ABC transporter transmembrane region MC60_003655 PF00664 ABC transporter transmembrane region MC60_003655 PF00005 ABC transporter MC60_003660 PF01627 Hpt domain MC60_003660 PF00072 Response regulator receiver domain MC60_003660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_003660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MC60_003660 PF00512 His Kinase A (phospho-acceptor) domain MC60_003660 PF00672 HAMP domain MC60_003665 PF00085 Thioredoxin MC60_003670 PF00939 Sodium:sulfate symporter transmembrane region MC60_003680 PF00343 Carbohydrate phosphorylase MC60_003700 PF00425 chorismate binding enzyme MC60_003700 PF04715 Anthranilate synthase component I, N terminal region MC60_003705 PF00293 NUDIX domain MC60_003710 PF03222 Tryptophan/tyrosine permease family MC60_003715 PF00375 Sodium:dicarboxylate symporter family MC60_003720 PF00570 HRDC domain MC60_003720 PF00271 Helicase conserved C-terminal domain MC60_003720 PF09382 RQC domain MC60_003720 PF16124 RecQ zinc-binding MC60_003720 PF00270 DEAD/DEAH box helicase MC60_003725 PF08298 PrkA AAA domain MC60_003725 PF06798 PrkA serine protein kinase C-terminal domain MC60_003730 PF04285 Protein of unknown function (DUF444) MC60_003735 PF04293 SpoVR like protein MC60_003740 PF00392 Bacterial regulatory proteins, gntR family MC60_003740 PF07840 FadR C-terminal domain MC60_003745 PF06450 Bacterial Na+/H+ antiporter B (NhaB) MC60_003750 PF02600 Disulfide bond formation protein DsbB MC60_003755 PF09335 SNARE associated Golgi protein MC60_003765 PF17757 UvrB interaction domain MC60_003765 PF02151 UvrB/uvrC motif MC60_003765 PF04851 Type III restriction enzyme, res subunit MC60_003765 PF00271 Helicase conserved C-terminal domain MC60_003765 PF12344 Ultra-violet resistance protein B MC60_003780 PF06826 Predicted Permease Membrane Region MC60_003780 PF02080 TrkA-C domain MC60_003785 PF10145 Phage-related minor tail protein MC60_003785 PF01551 Peptidase family M23 MC60_003785 PF01464 Transglycosylase SLT domain MC60_003800 PF01970 Tripartite tricarboxylate transporter TctA family MC60_003805 PF00072 Response regulator receiver domain MC60_003810 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MC60_003810 PF17203 Single cache domain 3 MC60_003810 PF00989 PAS fold MC60_003810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_003815 PF01047 MarR family MC60_003815 PF00480 ROK family MC60_003820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_003820 PF17200 Single Cache domain 2 MC60_003820 PF00672 HAMP domain MC60_003825 PF02810 SEC-C motif MC60_003830 PF04324 BFD-like [2Fe-2S] binding domain MC60_003830 PF01266 FAD dependent oxidoreductase MC60_003835 PF00890 FAD binding domain MC60_003840 PF13183 4Fe-4S dicluster domain MC60_003840 PF02754 Cysteine-rich domain MC60_003850 PF02335 Cytochrome c552 MC60_003855 PF13435 Cytochrome c554 and c-prime MC60_003855 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) MC60_003860 PF13247 4Fe-4S dicluster domain MC60_003860 PF00037 4Fe-4S binding domain MC60_003865 PF03916 Polysulphide reductase, NrfD MC60_003870 PF01578 Cytochrome C assembly protein MC60_003870 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MC60_003875 PF08534 Redoxin MC60_003880 PF03918 Cytochrome C biogenesis protein MC60_003885 PF00768 D-alanyl-D-alanine carboxypeptidase MC60_003895 PF04244 Deoxyribodipyrimidine photo-lyase-related protein MC60_003900 PF01266 FAD dependent oxidoreductase MC60_003905 PF00571 CBS domain MC60_003905 PF00478 IMP dehydrogenase / GMP reductase domain MC60_003915 PF08267 Cobalamin-independent synthase, N-terminal domain MC60_003915 PF01717 Cobalamin-independent synthase, Catalytic domain MC60_003920 PF03466 LysR substrate binding domain MC60_003920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_003930 PF07715 TonB-dependent Receptor Plug Domain MC60_003930 PF00593 TonB dependent receptor MC60_003935 PF00990 Diguanylate cyclase, GGDEF domain MC60_003940 PF00563 EAL domain MC60_003940 PF12792 CSS motif domain associated with EAL MC60_003945 PF12833 Helix-turn-helix domain MC60_003945 PF02311 AraC-like ligand binding domain MC60_003950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_003950 PF03466 LysR substrate binding domain MC60_003955 PF13460 NAD(P)H-binding MC60_003965 PF01053 Cys/Met metabolism PLP-dependent enzyme MC60_003970 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MC60_003970 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MC60_003990 PF00141 Peroxidase MC60_003995 PF08220 DeoR-like helix-turn-helix domain MC60_003995 PF00455 DeoR C terminal sensor domain MC60_004020 PF10722 Putative bacterial sensory transduction regulator MC60_004030 PF00265 Thymidine kinase MC60_004035 PF03553 Na+/H+ antiporter family MC60_004040 PF00816 H-NS histone family MC60_004045 PF01923 Cobalamin adenosyltransferase MC60_004050 PF12843 Putative quorum-sensing-regulated virulence factor MC60_004055 PF04055 Radical SAM superfamily MC60_004060 PF06508 Queuosine biosynthesis protein QueC MC60_004075 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MC60_004080 PF18073 Rubredoxin metal binding domain MC60_004090 PF00216 Bacterial DNA-binding protein MC60_004095 PF00575 S1 RNA binding domain MC60_004100 PF02224 Cytidylate kinase MC60_004105 PF00925 GTP cyclohydrolase II MC60_004110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_004110 PF03466 LysR substrate binding domain MC60_004115 PF07690 Major Facilitator Superfamily MC60_004130 PF00881 Nitroreductase family MC60_004135 PF03806 AbgT putative transporter family MC60_004140 PF00563 EAL domain MC60_004140 PF00990 Diguanylate cyclase, GGDEF domain MC60_004140 PF03707 Bacterial signalling protein N terminal repeat MC60_004140 PF13188 PAS domain MC60_004150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_004150 PF03466 LysR substrate binding domain MC60_004155 PF00486 Transcriptional regulatory protein, C terminal MC60_004155 PF00072 Response regulator receiver domain MC60_004165 PF01212 Beta-eliminating lyase MC60_004180 PF00248 Aldo/keto reductase family MC60_004185 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MC60_004195 PF03411 Penicillin-insensitive murein endopeptidase MC60_004205 PF04536 TPM domain MC60_004225 PF01618 MotA/TolQ/ExbB proton channel family MC60_004230 PF00691 OmpA family MC60_004230 PF13677 Membrane MotB of proton-channel complex MotA/MotB MC60_004235 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MC60_004240 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MC60_004245 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MC60_004245 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MC60_004255 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MC60_004255 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MC60_004260 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MC60_004260 PF00384 Molybdopterin oxidoreductase MC60_004260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MC60_004265 PF00146 NADH dehydrogenase MC60_004270 PF12838 4Fe-4S dicluster domain MC60_004275 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MC60_004280 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MC60_004285 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MC60_004285 PF00361 Proton-conducting membrane transporter MC60_004290 PF00361 Proton-conducting membrane transporter MC60_004295 PF00361 Proton-conducting membrane transporter MC60_004300 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MC60_004300 PF02769 AIR synthase related protein, C-terminal domain MC60_004300 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MC60_004305 PF01464 Transglycosylase SLT domain MC60_004305 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC60_004310 PF07191 zinc-ribbons MC60_004315 PF01926 50S ribosome-binding GTPase MC60_004315 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MC60_004320 PF13360 PQQ-like domain MC60_004325 PF09976 Tetratricopeptide repeat-like domain MC60_004330 PF13393 Histidyl-tRNA synthetase MC60_004330 PF03129 Anticodon binding domain MC60_004335 PF04551 GcpE protein MC60_004340 PF13464 Domain of unknown function (DUF4115) MC60_004350 PF04055 Radical SAM superfamily MC60_004355 PF00334 Nucleoside diphosphate kinase MC60_004360 PF12404 Peptidase MC60_004360 PF00883 Cytosol aminopeptidase family, catalytic domain MC60_004365 PF00883 Cytosol aminopeptidase family, catalytic domain MC60_004365 PF12404 Peptidase MC60_004370 PF00111 2Fe-2S iron-sulfur cluster binding domain MC60_004375 PF00012 Hsp70 protein MC60_004380 PF07743 HSCB C-terminal oligomerisation domain MC60_004380 PF00226 DnaJ domain MC60_004385 PF01521 Iron-sulphur cluster biosynthesis MC60_004390 PF01592 NifU-like N terminal domain MC60_004395 PF00266 Aminotransferase class-V MC60_004400 PF02082 Transcriptional regulator MC60_004405 PF00588 SpoU rRNA Methylase family MC60_004425 PF13181 Tetratricopeptide repeat MC60_004425 PF07719 Tetratricopeptide repeat MC60_004430 PF00581 Rhodanese-like domain MC60_004435 PF07549 SecD/SecF GG Motif MC60_004435 PF02355 Protein export membrane protein MC60_004440 PF07549 SecD/SecF GG Motif MC60_004440 PF13721 SecD export protein N-terminal TM region MC60_004440 PF02355 Protein export membrane protein MC60_004445 PF02699 Preprotein translocase subunit MC60_004450 PF01702 Queuine tRNA-ribosyltransferase MC60_004455 PF02547 Queuosine biosynthesis protein MC60_004460 PF00571 CBS domain MC60_004465 PF00578 AhpC/TSA family MC60_004465 PF10417 C-terminal domain of 1-Cys peroxiredoxin MC60_004470 PF13192 Thioredoxin domain MC60_004470 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC60_004475 PF07690 Major Facilitator Superfamily MC60_004515 PF13538 UvrD-like helicase C-terminal domain MC60_004515 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain MC60_004515 PF14490 Helix-hairpin-helix containing domain MC60_004565 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) MC60_004565 PF18766 SWI2/SNF2 ATPase MC60_004565 PF11867 Domain of unknown function (DUF3387) MC60_004570 PF05762 VWA domain containing CoxE-like protein MC60_004575 PF12592 Protein of unknown function (DUF3763) MC60_004575 PF07728 AAA domain (dynein-related subfamily) MC60_004575 PF17868 AAA lid domain MC60_004580 PF03695 Uncharacterised protein family (UPF0149) MC60_004580 PF02810 SEC-C motif MC60_004590 PF12161 HsdM N-terminal domain MC60_004590 PF02384 N-6 DNA Methylase MC60_004595 PF02347 Glycine cleavage system P-protein MC60_004600 PF01597 Glycine cleavage H-protein MC60_004605 PF08669 Glycine cleavage T-protein C-terminal barrel domain MC60_004605 PF01571 Aminomethyltransferase folate-binding domain MC60_004610 PF01494 FAD binding domain MC60_004615 PF01494 FAD binding domain MC60_004620 PF03695 Uncharacterised protein family (UPF0149) MC60_004625 PF05164 Cell division protein ZapA MC60_004635 PF07690 Major Facilitator Superfamily MC60_004640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC60_004640 PF00005 ABC transporter MC60_004645 PF00528 Binding-protein-dependent transport system inner membrane component MC60_004645 PF12911 N-terminal TM domain of oligopeptide transport permease C MC60_004650 PF00528 Binding-protein-dependent transport system inner membrane component MC60_004660 PF02798 Glutathione S-transferase, N-terminal domain MC60_004660 PF00043 Glutathione S-transferase, C-terminal domain MC60_004665 PF02798 Glutathione S-transferase, N-terminal domain MC60_004665 PF00043 Glutathione S-transferase, C-terminal domain MC60_004675 PF00459 Inositol monophosphatase family MC60_004680 PF18393 MotY N-terminal domain MC60_004680 PF00691 OmpA family MC60_004685 PF00672 HAMP domain MC60_004685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_004685 PF12729 Four helix bundle sensory module for signal transduction MC60_004690 PF00929 Exonuclease MC60_004695 PF13726 Na+-H+ antiporter family MC60_004695 PF03553 Na+/H+ antiporter family MC60_004700 PF07690 Major Facilitator Superfamily MC60_004705 PF03466 LysR substrate binding domain MC60_004705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_004710 PF00563 EAL domain MC60_004710 PF08447 PAS fold MC60_004710 PF00990 Diguanylate cyclase, GGDEF domain MC60_004710 PF08448 PAS fold MC60_004720 PF00271 Helicase conserved C-terminal domain MC60_004720 PF03880 DbpA RNA binding domain MC60_004720 PF00270 DEAD/DEAH box helicase MC60_004725 PF03061 Thioesterase superfamily MC60_004735 PF13183 4Fe-4S dicluster domain MC60_004735 PF01565 FAD binding domain MC60_004735 PF02913 FAD linked oxidases, C-terminal domain MC60_004750 PF03741 Integral membrane protein TerC family MC60_004750 PF03471 Transporter associated domain MC60_004755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MC60_004760 PF08240 Alcohol dehydrogenase GroES-like domain MC60_004760 PF00107 Zinc-binding dehydrogenase MC60_004765 PF00962 Adenosine/AMP deaminase MC60_004770 PF13344 Haloacid dehalogenase-like hydrolase MC60_004780 PF13537 Glutamine amidotransferase domain MC60_004780 PF00733 Asparagine synthase MC60_004795 PF02798 Glutathione S-transferase, N-terminal domain MC60_004795 PF14497 Glutathione S-transferase, C-terminal domain MC60_004805 PF04209 homogentisate 1,2-dioxygenase MC60_004810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC60_004820 PF00849 RNA pseudouridylate synthase MC60_004825 PF13426 PAS domain MC60_004825 PF00990 Diguanylate cyclase, GGDEF domain MC60_004825 PF00563 EAL domain MC60_004830 PF08447 PAS fold MC60_004830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_004840 PF00285 Citrate synthase, C-terminal domain MC60_004845 PF00694 Aconitase C-terminal domain MC60_004845 PF00330 Aconitase family (aconitate hydratase) MC60_004850 PF04303 PrpF protein MC60_004865 PF00593 TonB dependent receptor MC60_004865 PF07715 TonB-dependent Receptor Plug Domain MC60_004865 PF07660 Secretin and TonB N terminus short domain MC60_004875 PF01027 Inhibitor of apoptosis-promoting Bax1 MC60_004880 PF12805 FUSC-like inner membrane protein yccS MC60_004885 PF04358 DsrC like protein MC60_004890 PF05036 Sporulation related domain MC60_004895 PF02875 Mur ligase family, glutamate ligase domain MC60_004895 PF08245 Mur ligase middle domain MC60_004900 PF17848 Acetyl-coA carboxylase zinc finger domain MC60_004900 PF01039 Carboxyl transferase domain MC60_004905 PF01416 tRNA pseudouridine synthase MC60_004915 PF02774 Semialdehyde dehydrogenase, dimerisation domain MC60_004915 PF01118 Semialdehyde dehydrogenase, NAD binding domain MC60_004920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MC60_004920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MC60_004920 PF11890 Domain of unknown function (DUF3410) MC60_004925 PF01569 PAP2 superfamily MC60_004930 PF03180 NLPA lipoprotein MC60_004955 PF00005 ABC transporter MC60_004960 PF00990 Diguanylate cyclase, GGDEF domain MC60_004970 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MC60_004970 PF02896 PEP-utilising enzyme, TIM barrel domain MC60_004970 PF00391 PEP-utilising enzyme, mobile domain MC60_004975 PF03618 Kinase/pyrophosphorylase MC60_004985 PF00324 Amino acid permease MC60_005030 PF00005 ABC transporter MC60_005030 PF03412 Peptidase C39 family MC60_005030 PF00664 ABC transporter transmembrane region MC60_005035 PF16199 Radical_SAM C-terminal domain MC60_005035 PF04055 Radical SAM superfamily MC60_005040 PF01493 GXGXG motif MC60_005040 PF04898 Glutamate synthase central domain MC60_005040 PF00310 Glutamine amidotransferases class-II MC60_005040 PF01645 Conserved region in glutamate synthase MC60_005045 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MC60_005045 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC60_005055 PF00528 Binding-protein-dependent transport system inner membrane component MC60_005060 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC60_005085 PF14521 Lysine-specific metallo-endopeptidase MC60_005095 PF00271 Helicase conserved C-terminal domain MC60_005095 PF00270 DEAD/DEAH box helicase MC60_005115 PF07759 Protein of unknown function (DUF1615) MC60_005120 PF00990 Diguanylate cyclase, GGDEF domain MC60_005125 PF08502 LeuA allosteric (dimerisation) domain MC60_005125 PF00682 HMGL-like MC60_005130 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MC60_005130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MC60_005130 PF02142 MGS-like domain MC60_005135 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MC60_005135 PF00117 Glutamine amidotransferase class-I MC60_005140 PF01113 Dihydrodipicolinate reductase, N-terminus MC60_005140 PF05173 Dihydrodipicolinate reductase, C-terminus MC60_005150 PF01812 5-formyltetrahydrofolate cyclo-ligase family MC60_005155 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MC60_005160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MC60_005160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MC60_005160 PF01842 ACT domain MC60_005165 PF01219 Prokaryotic diacylglycerol kinase MC60_005170 PF00793 DAHP synthetase I family MC60_005180 PF00005 ABC transporter MC60_005185 PF01032 FecCD transport family MC60_005200 PF00437 Type II/IV secretion system protein MC60_005210 PF07670 Nucleoside recognition MC60_005210 PF02421 Ferrous iron transport protein B MC60_005210 PF17910 FeoB cytosolic helical domain MC60_005210 PF07664 Ferrous iron transport protein B C terminus MC60_005220 PF01253 Translation initiation factor SUI1 MC60_005225 PF01169 Uncharacterized protein family UPF0016 MC60_005260 PF00990 Diguanylate cyclase, GGDEF domain MC60_005260 PF13185 GAF domain MC60_005280 PF01406 tRNA synthetases class I (C) catalytic domain MC60_005280 PF09190 DALR domain MC60_005285 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MC60_005295 PF00149 Calcineurin-like phosphoesterase MC60_005300 PF04226 Transglycosylase associated protein MC60_005305 PF00440 Bacterial regulatory proteins, tetR family MC60_005305 PF16925 Tetracyclin repressor-like, C-terminal domain MC60_005310 PF00107 Zinc-binding dehydrogenase MC60_005310 PF08240 Alcohol dehydrogenase GroES-like domain MC60_005315 PF13426 PAS domain MC60_005315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_005315 PF08447 PAS fold MC60_005325 PF00589 Phage integrase family MC60_005460 PF03477 ATP cone domain MC60_005460 PF13597 Anaerobic ribonucleoside-triphosphate reductase MC60_005465 PF03120 NAD-dependent DNA ligase OB-fold domain MC60_005465 PF12826 Helix-hairpin-helix motif MC60_005465 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MC60_005465 PF00533 BRCA1 C Terminus (BRCT) domain MC60_005465 PF01653 NAD-dependent DNA ligase adenylation domain MC60_005470 PF02511 Thymidylate synthase complementing protein MC60_005565 PF01066 CDP-alcohol phosphatidyltransferase MC60_005570 PF01541 GIY-YIG catalytic domain MC60_005570 PF02151 UvrB/uvrC motif MC60_005570 PF08459 UvrC Helix-hairpin-helix N-terminal MC60_005575 PF00196 Bacterial regulatory proteins, luxR family MC60_005575 PF00072 Response regulator receiver domain MC60_005580 PF02348 Cytidylyltransferase MC60_005585 PF03966 Trm112p-like protein MC60_005590 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MC60_005595 PF00005 ABC transporter MC60_005595 PF00664 ABC transporter transmembrane region MC60_005600 PF03772 Competence protein MC60_005600 PF00753 Metallo-beta-lactamase superfamily MC60_005615 PF05872 Bacterial protein of unknown function (DUF853) MC60_005620 PF00155 Aminotransferase class I and II MC60_005635 PF06733 DEAD_2 MC60_005635 PF13307 Helicase C-terminal domain MC60_005645 PF00850 Histone deacetylase domain MC60_005650 PF07690 Major Facilitator Superfamily MC60_005655 PF01926 50S ribosome-binding GTPase MC60_005660 PF00245 Alkaline phosphatase MC60_005665 PF00245 Alkaline phosphatase MC60_005680 PF01272 Transcription elongation factor, GreA/GreB, C-term MC60_005680 PF14760 Rnk N-terminus MC60_005685 PF00990 Diguanylate cyclase, GGDEF domain MC60_005685 PF08448 PAS fold MC60_005690 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC60_005695 PF00528 Binding-protein-dependent transport system inner membrane component MC60_005700 PF00005 ABC transporter MC60_005705 PF04116 Fatty acid hydroxylase superfamily MC60_005710 PF13520 Amino acid permease MC60_005715 PF02965 Vitamin B12 dependent methionine synthase, activation domain MC60_005715 PF00809 Pterin binding enzyme MC60_005715 PF02310 B12 binding domain MC60_005715 PF02574 Homocysteine S-methyltransferase MC60_005715 PF02607 B12 binding domain MC60_005725 PF00571 CBS domain MC60_005725 PF03471 Transporter associated domain MC60_005725 PF01595 Cyclin M transmembrane N-terminal domain MC60_005730 PF01895 PhoU domain MC60_005740 PF00528 Binding-protein-dependent transport system inner membrane component MC60_005745 PF00528 Binding-protein-dependent transport system inner membrane component MC60_005750 PF14437 MafB19-like deaminase MC60_005765 PF01274 Malate synthase MC60_005770 PF00463 Isocitrate lyase family MC60_005775 PF00308 Bacterial dnaA protein MC60_005790 PF00586 AIR synthase related protein, N-terminal domain MC60_005790 PF02769 AIR synthase related protein, C-terminal domain MC60_005795 PF00551 Formyl transferase MC60_005800 PF01784 NIF3 (NGG1p interacting factor 3) MC60_005805 PF02954 Bacterial regulatory protein, Fis family MC60_005805 PF00158 Sigma-54 interaction domain MC60_005810 PF00989 PAS fold MC60_005810 PF00512 His Kinase A (phospho-acceptor) domain MC60_005810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_005815 PF02954 Bacterial regulatory protein, Fis family MC60_005815 PF00158 Sigma-54 interaction domain MC60_005815 PF00072 Response regulator receiver domain MC60_005825 PF01842 ACT domain MC60_005830 PF13090 Polyphosphate kinase C-terminal domain 2 MC60_005830 PF17941 Polyphosphate kinase C-terminal domain 1 MC60_005830 PF13089 Polyphosphate kinase N-terminal domain MC60_005830 PF02503 Polyphosphate kinase middle domain MC60_005835 PF02541 Ppx/GppA phosphatase family MC60_005840 PF03448 MgtE intracellular N domain MC60_005840 PF00571 CBS domain MC60_005840 PF01769 Divalent cation transporter MC60_005850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MC60_005850 PF07196 Flagellin hook IN motif MC60_005855 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MC60_005855 PF10135 Rod binding protein MC60_005860 PF02119 Flagellar P-ring protein MC60_005865 PF02107 Flagellar L-ring protein MC60_005870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MC60_005870 PF00460 Flagella basal body rod protein MC60_005875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MC60_005875 PF00460 Flagella basal body rod protein MC60_005880 PF07559 Flagellar basal body protein FlaE MC60_005880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MC60_005880 PF00460 Flagella basal body rod protein MC60_005890 PF00460 Flagella basal body rod protein MC60_005890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MC60_005895 PF00460 Flagella basal body rod protein MC60_005900 PF03705 CheR methyltransferase, all-alpha domain MC60_005900 PF01739 CheR methyltransferase, SAM binding domain MC60_005905 PF00072 Response regulator receiver domain MC60_005905 PF01584 CheW-like domain MC60_005910 PF13144 Chaperone for flagella basal body P-ring formation MC60_005925 PF12850 Calcineurin-like phosphoesterase superfamily domain MC60_005930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC60_005940 PF00849 RNA pseudouridylate synthase MC60_005940 PF01479 S4 domain MC60_005945 PF01966 HD domain MC60_005955 PF00892 EamA-like transporter family MC60_005960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC60_005985 PF00313 'Cold-shock' DNA-binding domain MC60_005990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MC60_005990 PF02817 e3 binding domain MC60_005990 PF00364 Biotin-requiring enzyme MC60_005995 PF02780 Transketolase, C-terminal domain MC60_005995 PF02779 Transketolase, pyrimidine binding domain MC60_006000 PF00676 Dehydrogenase E1 component MC60_006005 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family MC60_006015 PF05472 DNA replication terminus site-binding protein (Ter protein) MC60_006020 PF00176 SNF2 family N-terminal domain MC60_006020 PF00271 Helicase conserved C-terminal domain MC60_006020 PF04434 SWIM zinc finger MC60_006025 PF04337 Protein of unknown function, DUF480 MC60_006035 PF02706 Chain length determinant protein MC60_006040 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MC60_006050 PF02719 Polysaccharide biosynthesis protein MC60_006055 PF02397 Bacterial sugar transferase MC60_006060 PF01370 NAD dependent epimerase/dehydratase family MC60_006065 PF00534 Glycosyl transferases group 1 MC60_006065 PF13439 Glycosyltransferase Family 4 MC60_006070 PF00535 Glycosyl transferase family 2 MC60_006075 PF00535 Glycosyl transferase family 2 MC60_006080 PF07478 D-ala D-ala ligase C-terminus MC60_006080 PF01820 D-ala D-ala ligase N-terminus MC60_006085 PF00132 Bacterial transferase hexapeptide (six repeats) MC60_006090 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MC60_006100 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MC60_006105 PF00483 Nucleotidyl transferase MC60_006110 PF04321 RmlD substrate binding domain MC60_006115 PF16363 GDP-mannose 4,6 dehydratase MC60_006125 PF00486 Transcriptional regulatory protein, C terminal MC60_006125 PF00072 Response regulator receiver domain MC60_006130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_006130 PF08918 PhoQ Sensor MC60_006135 PF02685 Glucokinase MC60_006140 PF01380 SIS domain MC60_006140 PF01418 Helix-turn-helix domain, rpiR family MC60_006145 PF00224 Pyruvate kinase, barrel domain MC60_006145 PF02887 Pyruvate kinase, alpha/beta domain MC60_006155 PF00873 AcrB/AcrD/AcrF family MC60_006160 PF09317 Domain of unknown function (DUF1974) MC60_006160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MC60_006160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MC60_006160 PF02770 Acyl-CoA dehydrogenase, middle domain MC60_006165 PF00440 Bacterial regulatory proteins, tetR family MC60_006215 PF02321 Outer membrane efflux protein MC60_006220 PF00873 AcrB/AcrD/AcrF family MC60_006225 PF00529 HlyD membrane-fusion protein of T1SS MC60_006225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MC60_006230 PF00440 Bacterial regulatory proteins, tetR family MC60_006230 PF08361 MAATS-type transcriptional repressor, C-terminal region MC60_006250 PF01479 S4 domain MC60_006250 PF00849 RNA pseudouridylate synthase MC60_006255 PF04079 Segregation and condensation complex subunit ScpB MC60_006260 PF02616 Segregation and condensation protein ScpA MC60_006265 PF01300 Telomere recombination MC60_006270 PF02811 PHP domain MC60_006275 PF04715 Anthranilate synthase component I, N terminal region MC60_006275 PF00425 chorismate binding enzyme MC60_006280 PF00117 Glutamine amidotransferase class-I MC60_006280 PF00591 Glycosyl transferase family, a/b domain MC60_006280 PF02885 Glycosyl transferase family, helical bundle domain MC60_006285 PF02885 Glycosyl transferase family, helical bundle domain MC60_006285 PF00591 Glycosyl transferase family, a/b domain MC60_006290 PF00218 Indole-3-glycerol phosphate synthase MC60_006290 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MC60_006295 PF00291 Pyridoxal-phosphate dependent enzyme MC60_006300 PF00290 Tryptophan synthase alpha chain MC60_006320 PF04307 LexA-binding, inner membrane-associated putative hydrolase MC60_006345 PF03466 LysR substrate binding domain MC60_006345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_006355 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MC60_006360 PF00005 ABC transporter MC60_006365 PF00528 Binding-protein-dependent transport system inner membrane component MC60_006370 PF02668 Taurine catabolism dioxygenase TauD, TfdA family MC60_006375 PF07237 Protein of unknown function (DUF1428) MC60_006380 PF07690 Major Facilitator Superfamily MC60_006390 PF01040 UbiA prenyltransferase family MC60_006395 PF03626 Prokaryotic Cytochrome C oxidase subunit IV MC60_006400 PF00510 Cytochrome c oxidase subunit III MC60_006405 PF00115 Cytochrome C and Quinol oxidase polypeptide I MC60_006410 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MC60_006410 PF06481 COX Aromatic Rich Motif MC60_006415 PF02627 Carboxymuconolactone decarboxylase family MC60_006420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_006420 PF03466 LysR substrate binding domain MC60_006430 PF01156 Inosine-uridine preferring nucleoside hydrolase MC60_006440 PF01047 MarR family MC60_006455 PF00127 Copper binding proteins, plastocyanin/azurin family MC60_006460 PF02424 ApbE family MC60_006465 PF00011 Hsp20/alpha crystallin family MC60_006470 PF00072 Response regulator receiver domain MC60_006480 PF03372 Endonuclease/Exonuclease/phosphatase family MC60_006490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MC60_006490 PF00529 HlyD membrane-fusion protein of T1SS MC60_006495 PF00873 AcrB/AcrD/AcrF family MC60_006510 PF10437 Bacterial lipoate protein ligase C-terminus MC60_006510 PF03099 Biotin/lipoate A/B protein ligase family MC60_006515 PF00563 EAL domain MC60_006515 PF00990 Diguanylate cyclase, GGDEF domain MC60_006515 PF03707 Bacterial signalling protein N terminal repeat MC60_006520 PF00873 AcrB/AcrD/AcrF family MC60_006535 PF04143 Sulphur transport MC60_006550 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC60_006560 PF02308 MgtC family MC60_006565 PF00356 Bacterial regulatory proteins, lacI family MC60_006565 PF13407 Periplasmic binding protein domain MC60_006570 PF08244 Glycosyl hydrolases family 32 C terminal MC60_006570 PF00251 Glycosyl hydrolases family 32 N-terminal domain MC60_006575 PF00367 phosphotransferase system, EIIB MC60_006575 PF02378 Phosphotransferase system, EIIC MC60_006580 PF00294 pfkB family carbohydrate kinase MC60_006585 PF11471 Maltoporin periplasmic N-terminal extension MC60_006585 PF02264 LamB porin MC60_006590 PF01556 DnaJ C terminal domain MC60_006590 PF00226 DnaJ domain MC60_006590 PF00684 DnaJ central domain MC60_006595 PF00012 Hsp70 protein MC60_006600 PF01025 GrpE MC60_006605 PF01513 ATP-NAD kinase MC60_006610 PF17158 Membrane-associated sensor, integral membrane domain MC60_006610 PF00990 Diguanylate cyclase, GGDEF domain MC60_006615 PF02463 RecF/RecN/SMC N terminal domain MC60_006625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MC60_006630 PF02687 FtsX-like permease family MC60_006630 PF12704 MacB-like periplasmic core domain MC60_006630 PF00005 ABC transporter MC60_006635 PF02321 Outer membrane efflux protein MC60_006640 PF08021 Siderophore-interacting FAD-binding domain MC60_006640 PF04954 Siderophore-interacting protein MC60_006645 PF00793 DAHP synthetase I family MC60_006650 PF00816 H-NS histone family MC60_006655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_006655 PF03466 LysR substrate binding domain MC60_006660 PF00291 Pyridoxal-phosphate dependent enzyme MC60_006670 PF00180 Isocitrate/isopropylmalate dehydrogenase MC60_006700 PF00583 Acetyltransferase (GNAT) family MC60_006705 PF00849 RNA pseudouridylate synthase MC60_006710 PF00293 NUDIX domain MC60_006720 PF04356 Protein of unknown function (DUF489) MC60_006725 PF00206 Lyase MC60_006725 PF08328 Adenylosuccinate lyase C-terminal MC60_006730 PF08007 Cupin superfamily protein MC60_006735 PF00224 Pyruvate kinase, barrel domain MC60_006735 PF02887 Pyruvate kinase, alpha/beta domain MC60_006740 PF12794 Mechanosensitive ion channel inner membrane domain 1 MC60_006740 PF12795 Mechanosensitive ion channel porin domain MC60_006740 PF00924 Mechanosensitive ion channel MC60_006745 PF01810 LysE type translocator MC60_006750 PF10282 Lactonase, 7-bladed beta-propeller MC60_006760 PF00860 Permease family MC60_006770 PF03949 Malic enzyme, NAD binding domain MC60_006770 PF00390 Malic enzyme, N-terminal domain MC60_006775 PF12804 MobA-like NTP transferase domain MC60_006780 PF03205 Molybdopterin guanine dinucleotide synthesis protein B MC60_006785 PF04632 Fusaric acid resistance protein family MC60_006800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_006800 PF08447 PAS fold MC60_006800 PF13426 PAS domain MC60_006820 PF05114 Protein of unknown function (DUF692) MC60_006835 PF02028 BCCT, betaine/carnitine/choline family transporter MC60_006865 PF00291 Pyridoxal-phosphate dependent enzyme MC60_006865 PF14821 Threonine synthase N terminus MC60_006870 PF08544 GHMP kinases C terminal MC60_006870 PF00288 GHMP kinases N terminal domain MC60_006875 PF00696 Amino acid kinase family MC60_006875 PF00742 Homoserine dehydrogenase MC60_006875 PF13840 ACT domain MC60_006875 PF01842 ACT domain MC60_006875 PF03447 Homoserine dehydrogenase, NAD binding domain MC60_006885 PF00588 SpoU rRNA Methylase family MC60_006890 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) MC60_006905 PF03737 Aldolase/RraA MC60_006915 PF00072 Response regulator receiver domain MC60_006915 PF00486 Transcriptional regulatory protein, C terminal MC60_006930 PF00664 ABC transporter transmembrane region MC60_006930 PF00005 ABC transporter MC60_006935 PF00005 ABC transporter MC60_006935 PF00664 ABC transporter transmembrane region MC60_006955 PF18389 TrmO C-terminal domain MC60_006955 PF01980 tRNA-methyltransferase O MC60_006960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MC60_006960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MC60_006970 PF06480 FtsH Extracellular MC60_006970 PF01434 Peptidase family M41 MC60_006970 PF00004 ATPase family associated with various cellular activities (AAA) MC60_006970 PF17862 AAA+ lid domain MC60_006975 PF00291 Pyridoxal-phosphate dependent enzyme MC60_006980 PF00381 PTS HPr component phosphorylation site MC60_006985 PF05524 PEP-utilising enzyme, N-terminal MC60_006985 PF00391 PEP-utilising enzyme, mobile domain MC60_006985 PF02896 PEP-utilising enzyme, TIM barrel domain MC60_006990 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MC60_006995 PF01292 Prokaryotic cytochrome b561 MC60_007005 PF12320 Type 5 capsule protein repressor C-terminal domain MC60_007005 PF00149 Calcineurin-like phosphoesterase MC60_007010 PF00583 Acetyltransferase (GNAT) family MC60_007015 PF04381 Putative exonuclease, RdgC MC60_007030 PF00999 Sodium/hydrogen exchanger family MC60_007030 PF02254 TrkA-N domain MC60_007035 PF02954 Bacterial regulatory protein, Fis family MC60_007035 PF00072 Response regulator receiver domain MC60_007035 PF00158 Sigma-54 interaction domain MC60_007065 PF01266 FAD dependent oxidoreductase MC60_007070 PF07883 Cupin domain MC60_007070 PF01381 Helix-turn-helix MC60_007075 PF00171 Aldehyde dehydrogenase family MC60_007080 PF00202 Aminotransferase class-III MC60_007085 PF00324 Amino acid permease MC60_007090 PF13520 Amino acid permease MC60_007100 PF02690 Na+/Pi-cotransporter MC60_007105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MC60_007105 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MC60_007110 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase MC60_007115 PF00072 Response regulator receiver domain MC60_007115 PF00989 PAS fold MC60_007115 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC60_007115 PF00512 His Kinase A (phospho-acceptor) domain MC60_007115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_007115 PF01627 Hpt domain MC60_007120 PF10725 Protein of unknown function (DUF2517) MC60_007140 PF00072 Response regulator receiver domain MC60_007140 PF00512 His Kinase A (phospho-acceptor) domain MC60_007140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_007140 PF09308 LuxQ, periplasmic MC60_007150 PF17969 L,D-transpeptidase C-terminal domain MC60_007150 PF01476 LysM domain MC60_007150 PF03734 L,D-transpeptidase catalytic domain MC60_007165 PF05971 RNA methyltransferase MC60_007170 PF00877 NlpC/P60 family MC60_007175 PF01648 4'-phosphopantetheinyl transferase superfamily MC60_007180 PF00085 Thioredoxin MC60_007190 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MC60_007195 PF00551 Formyl transferase MC60_007195 PF01842 ACT domain MC60_007205 PF13396 Phospholipase_D-nuclease N-terminal MC60_007205 PF13091 PLD-like domain MC60_007220 PF10145 Phage-related minor tail protein MC60_007220 PF01464 Transglycosylase SLT domain MC60_007220 PF01551 Peptidase family M23 MC60_007230 PF00230 Major intrinsic protein MC60_007235 PF02075 Crossover junction endodeoxyribonuclease RuvC MC60_007240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MC60_007265 PF11842 Domain of unknown function (DUF3362) MC60_007265 PF08497 Radical SAM N-terminal MC60_007265 PF04055 Radical SAM superfamily MC60_007270 PF00873 AcrB/AcrD/AcrF family MC60_007280 PF00990 Diguanylate cyclase, GGDEF domain MC60_007280 PF17158 Membrane-associated sensor, integral membrane domain MC60_007285 PF01734 Patatin-like phospholipase MC60_007290 PF00209 Sodium:neurotransmitter symporter family MC60_007305 PF00691 OmpA family MC60_007305 PF01389 OmpA-like transmembrane domain MC60_007310 PF01389 OmpA-like transmembrane domain MC60_007310 PF00691 OmpA family MC60_007315 PF01389 OmpA-like transmembrane domain MC60_007315 PF00691 OmpA family MC60_007320 PF00390 Malic enzyme, N-terminal domain MC60_007320 PF03949 Malic enzyme, NAD binding domain MC60_007325 PF12833 Helix-turn-helix domain MC60_007330 PF01554 MatE MC60_007335 PF10692 Protein of unknown function (DUF2498) MC60_007340 PF00990 Diguanylate cyclase, GGDEF domain MC60_007340 PF00072 Response regulator receiver domain MC60_007345 PF00860 Permease family MC60_007355 PF01235 Sodium:alanine symporter family MC60_007360 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MC60_007360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MC60_007365 PF01699 Sodium/calcium exchanger protein MC60_007370 PF08534 Redoxin MC60_007375 PF00293 NUDIX domain MC60_007385 PF00005 ABC transporter MC60_007390 PF00528 Binding-protein-dependent transport system inner membrane component MC60_007395 PF00528 Binding-protein-dependent transport system inner membrane component MC60_007400 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC60_007410 PF00795 Carbon-nitrogen hydrolase MC60_007415 PF00005 ABC transporter MC60_007420 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MC60_007420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MC60_007435 PF03932 CutC family MC60_007440 PF00480 ROK family MC60_007450 PF01435 Peptidase family M48 MC60_007455 PF12849 PBP superfamily domain MC60_007460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_007460 PF11808 Phosphate regulon sensor protein PhoR MC60_007460 PF00512 His Kinase A (phospho-acceptor) domain MC60_007460 PF00989 PAS fold MC60_007465 PF00072 Response regulator receiver domain MC60_007465 PF00486 Transcriptional regulatory protein, C terminal MC60_007470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC60_007475 PF00990 Diguanylate cyclase, GGDEF domain MC60_007475 PF07694 5TMR of 5TMR-LYT MC60_007480 PF01590 GAF domain MC60_007480 PF00158 Sigma-54 interaction domain MC60_007480 PF02954 Bacterial regulatory protein, Fis family MC60_007485 PF00171 Aldehyde dehydrogenase family MC60_007495 PF00892 EamA-like transporter family MC60_007500 PF12431 Transcriptional regulator MC60_007500 PF00072 Response regulator receiver domain MC60_007505 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MC60_007505 PF17203 Single cache domain 3 MC60_007505 PF00989 PAS fold MC60_007505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_007510 PF01047 MarR family MC60_007515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MC60_007515 PF00529 HlyD membrane-fusion protein of T1SS MC60_007535 PF01679 Proteolipid membrane potential modulator MC60_007545 PF03477 ATP cone domain MC60_007545 PF13597 Anaerobic ribonucleoside-triphosphate reductase MC60_007555 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MC60_007555 PF00533 BRCA1 C Terminus (BRCT) domain MC60_007555 PF01653 NAD-dependent DNA ligase adenylation domain MC60_007555 PF03120 NAD-dependent DNA ligase OB-fold domain MC60_007555 PF12826 Helix-hairpin-helix motif MC60_007560 PF04354 ZipA, C-terminal FtsZ-binding domain MC60_007565 PF06470 SMC proteins Flexible Hinge Domain MC60_007565 PF02463 RecF/RecN/SMC N terminal domain MC60_007575 PF03458 UPF0126 domain MC60_007585 PF05951 Bacterial protein of unknown function (DUF882) MC60_007590 PF03734 L,D-transpeptidase catalytic domain MC60_007590 PF01471 Putative peptidoglycan binding domain MC60_007605 PF00535 Glycosyl transferase family 2 MC60_007620 PF00128 Alpha amylase, catalytic domain MC60_007630 PF00128 Alpha amylase, catalytic domain MC60_007640 PF00072 Response regulator receiver domain MC60_007640 PF00196 Bacterial regulatory proteins, luxR family MC60_007670 PF02254 TrkA-N domain MC60_007670 PF00999 Sodium/hydrogen exchanger family MC60_007670 PF02080 TrkA-C domain MC60_007675 PF00990 Diguanylate cyclase, GGDEF domain MC60_007680 PF01171 PP-loop family MC60_007680 PF09179 TilS substrate binding domain MC60_007680 PF11734 TilS substrate C-terminal domain MC60_007685 PF05649 Peptidase family M13 MC60_007685 PF01431 Peptidase family M13 MC60_007705 PF13520 Amino acid permease MC60_007715 PF03466 LysR substrate binding domain MC60_007715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_007725 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MC60_007730 PF07733 Bacterial DNA polymerase III alpha NTPase domain MC60_007730 PF01336 OB-fold nucleic acid binding domain MC60_007730 PF02811 PHP domain MC60_007730 PF14579 Helix-hairpin-helix motif MC60_007730 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MC60_007735 PF01351 Ribonuclease HII MC60_007740 PF02684 Lipid-A-disaccharide synthetase MC60_007745 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MC60_007745 PF00132 Bacterial transferase hexapeptide (six repeats) MC60_007750 PF07977 FabA-like domain MC60_007755 PF00132 Bacterial transferase hexapeptide (six repeats) MC60_007755 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MC60_007760 PF03938 Outer membrane protein (OmpH-like) MC60_007765 PF07244 Surface antigen variable number repeat MC60_007765 PF01103 Surface antigen MC60_007770 PF17820 PDZ domain MC60_007770 PF02163 Peptidase family M50 MC60_007775 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MC60_007775 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MC60_007775 PF13288 DXP reductoisomerase C-terminal domain MC60_007785 PF01255 Putative undecaprenyl diphosphate synthase MC60_007790 PF01765 Ribosome recycling factor MC60_007795 PF00696 Amino acid kinase family MC60_007800 PF00889 Elongation factor TS MC60_007805 PF00318 Ribosomal protein S2 MC60_007810 PF00557 Metallopeptidase family M24 MC60_007815 PF01909 Nucleotidyltransferase domain MC60_007815 PF08335 GlnD PII-uridylyltransferase MC60_007815 PF01842 ACT domain MC60_007815 PF01966 HD domain MC60_007820 PF14602 Hexapeptide repeat of succinyl-transferase MC60_007820 PF00132 Bacterial transferase hexapeptide (six repeats) MC60_007820 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MC60_007825 PF11944 Protein of unknown function (DUF3461) MC60_007830 PF00367 phosphotransferase system, EIIB MC60_007830 PF02378 Phosphotransferase system, EIIC MC60_007835 PF07148 Maltose operon periplasmic protein precursor (MalM) MC60_007840 PF02264 LamB porin MC60_007845 PF00258 Flavodoxin MC60_007850 PF00849 RNA pseudouridylate synthase MC60_007855 PF04287 tRNA pseudouridine synthase C MC60_007880 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) MC60_007885 PF07348 Syd protein (SUKH-2) MC60_007890 PF14489 QueF-like protein MC60_007890 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term MC60_007900 PF00990 Diguanylate cyclase, GGDEF domain MC60_007905 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases MC60_007905 PF03641 Possible lysine decarboxylase MC60_007905 PF11892 Domain of unknown function (DUF3412) MC60_007910 PF01367 5'-3' exonuclease, C-terminal SAM fold MC60_007910 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MC60_007915 PF18324 Hypothetical protein TT1725 MC60_007915 PF00180 Isocitrate/isopropylmalate dehydrogenase MC60_007925 PF01728 FtsJ-like methyltransferase MC60_007925 PF18125 RlmM ferredoxin-like domain MC60_007940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_007940 PF03466 LysR substrate binding domain MC60_007945 PF00672 HAMP domain MC60_007945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_007950 PF00817 impB/mucB/samB family MC60_007950 PF11799 impB/mucB/samB family C-terminal domain MC60_007950 PF11798 IMS family HHH motif MC60_007965 PF02424 ApbE family MC60_007970 PF00970 Oxidoreductase FAD-binding domain MC60_007970 PF00111 2Fe-2S iron-sulfur cluster binding domain MC60_007970 PF00175 Oxidoreductase NAD-binding domain MC60_007975 PF02508 Rnf-Nqr subunit, membrane protein MC60_007980 PF02508 Rnf-Nqr subunit, membrane protein MC60_007985 PF04205 FMN-binding domain MC60_007990 PF03116 NQR2, RnfD, RnfE family MC60_007995 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) MC60_007995 PF11973 NQRA C-terminal domain MC60_008000 PF01722 BolA-like protein MC60_008005 PF05175 Methyltransferase small domain MC60_008015 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MC60_008025 PF07690 Major Facilitator Superfamily MC60_008030 PF03502 Nucleoside-specific channel-forming protein, Tsx MC60_008035 PF04461 Protein of unknown function (DUF520) MC60_008040 PF02558 Ketopantoate reductase PanE/ApbA MC60_008040 PF08546 Ketopantoate reductase PanE/ApbA C terminal MC60_008045 PF01965 DJ-1/PfpI family MC60_008095 PF04717 Type VI secretion system, phage-baseplate injector MC60_008100 PF05638 Type VI secretion system effector, Hcp MC60_008105 PF03472 Autoinducer binding domain MC60_008105 PF00196 Bacterial regulatory proteins, luxR family MC60_008110 PF01740 STAS domain MC60_008110 PF00916 Sulfate permease family MC60_008115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_008115 PF00672 HAMP domain MC60_008115 PF00512 His Kinase A (phospho-acceptor) domain MC60_008120 PF00072 Response regulator receiver domain MC60_008120 PF00486 Transcriptional regulatory protein, C terminal MC60_008125 PF00529 HlyD membrane-fusion protein of T1SS MC60_008125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MC60_008130 PF00873 AcrB/AcrD/AcrF family MC60_008150 PF00356 Bacterial regulatory proteins, lacI family MC60_008155 PF13416 Bacterial extracellular solute-binding protein MC60_008160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_008160 PF00672 HAMP domain MC60_008160 PF12729 Four helix bundle sensory module for signal transduction MC60_008165 PF00933 Glycosyl hydrolase family 3 N terminal domain MC60_008175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MC60_008180 PF02378 Phosphotransferase system, EIIC MC60_008180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MC60_008185 PF00232 Glycosyl hydrolase family 1 MC60_008190 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit MC60_008195 PF00722 Glycosyl hydrolases family 16 MC60_008210 PF16363 GDP-mannose 4,6 dehydratase MC60_008215 PF00042 Globin MC60_008215 PF00970 Oxidoreductase FAD-binding domain MC60_008215 PF00175 Oxidoreductase NAD-binding domain MC60_008220 PF03063 Prismane/CO dehydrogenase family MC60_008225 PF00210 Ferritin-like domain MC60_008265 PF00106 short chain dehydrogenase MC60_008275 PF00875 DNA photolyase MC60_008275 PF03441 FAD binding domain of DNA photolyase MC60_008280 PF13411 MerR HTH family regulatory protein MC60_008285 PF08349 Protein of unknown function (DUF1722) MC60_008310 PF01817 Chorismate mutase type II MC60_008310 PF00800 Prephenate dehydratase MC60_008335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MC60_008335 PF00529 HlyD membrane-fusion protein of T1SS MC60_008340 PF00664 ABC transporter transmembrane region MC60_008340 PF00005 ABC transporter MC60_008350 PF13181 Tetratricopeptide repeat MC60_008360 PF03976 Polyphosphate kinase 2 (PPK2) MC60_008365 PF07995 Glucose / Sorbosone dehydrogenase MC60_008375 PF00455 DeoR C terminal sensor domain MC60_008375 PF08220 DeoR-like helix-turn-helix domain MC60_008380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MC60_008380 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MC60_008385 PF07005 Sugar-binding N-terminal domain MC60_008385 PF17042 Nucleotide-binding C-terminal domain MC60_008390 PF00596 Class II Aldolase and Adducin N-terminal domain MC60_008395 PF01261 Xylose isomerase-like TIM barrel MC60_008400 PF01370 NAD dependent epimerase/dehydratase family MC60_008405 PF02447 GntP family permease MC60_008415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_008415 PF02743 Cache domain MC60_008415 PF00672 HAMP domain MC60_008420 PF03573 outer membrane porin, OprD family MC60_008425 PF00106 short chain dehydrogenase MC60_008450 PF02074 Carboxypeptidase Taq (M32) metallopeptidase MC60_008455 PF02805 Metal binding domain of Ada MC60_008455 PF12833 Helix-turn-helix domain MC60_008455 PF00730 HhH-GPD superfamily base excision DNA repair protein MC60_008455 PF06029 AlkA N-terminal domain MC60_008460 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MC60_008460 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MC60_008470 PF06906 Protein of unknown function (DUF1272) MC60_008480 PF12392 Collagenase MC60_008480 PF01136 Peptidase family U32 MC60_008485 PF01810 LysE type translocator MC60_008490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_008490 PF03466 LysR substrate binding domain MC60_008520 PF00563 EAL domain MC60_008520 PF00990 Diguanylate cyclase, GGDEF domain MC60_008520 PF00989 PAS fold MC60_008520 PF01590 GAF domain MC60_008530 PF01568 Molydopterin dinucleotide binding domain MC60_008530 PF00384 Molybdopterin oxidoreductase MC60_008530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MC60_008535 PF03916 Polysulphide reductase, NrfD MC60_008540 PF13247 4Fe-4S dicluster domain MC60_008545 PF00512 His Kinase A (phospho-acceptor) domain MC60_008545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_008545 PF00989 PAS fold MC60_008550 PF00196 Bacterial regulatory proteins, luxR family MC60_008550 PF00072 Response regulator receiver domain MC60_008555 PF03575 Peptidase family S51 MC60_008560 PF07690 Major Facilitator Superfamily MC60_008565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MC60_008565 PF00529 HlyD membrane-fusion protein of T1SS MC60_008575 PF00206 Lyase MC60_008575 PF10415 Fumarase C C-terminus MC60_008585 PF00171 Aldehyde dehydrogenase family MC60_008585 PF01619 Proline dehydrogenase MC60_008585 PF18327 Proline utilization A proline dehydrogenase N-terminal domain MC60_008585 PF14850 DNA-binding domain of Proline dehydrogenase MC60_008590 PF01168 Alanine racemase, N-terminal domain MC60_008590 PF00842 Alanine racemase, C-terminal domain MC60_008595 PF03796 DnaB-like helicase C terminal domain MC60_008595 PF00772 DnaB-like helicase N terminal domain MC60_008605 PF00149 Calcineurin-like phosphoesterase MC60_008605 PF02872 5'-nucleotidase, C-terminal domain MC60_008625 PF00072 Response regulator receiver domain MC60_008625 PF02954 Bacterial regulatory protein, Fis family MC60_008625 PF00158 Sigma-54 interaction domain MC60_008630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MC60_008630 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MC60_008640 PF04102 SlyX MC60_008645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MC60_008650 PF09526 Probable metal-binding protein (DUF2387) MC60_008660 PF01584 CheW-like domain MC60_008660 PF00072 Response regulator receiver domain MC60_008665 PF00561 alpha/beta hydrolase fold MC60_008670 PF00563 EAL domain MC60_008670 PF01590 GAF domain MC60_008670 PF00990 Diguanylate cyclase, GGDEF domain MC60_008670 PF00360 Phytochrome region MC60_008675 PF06794 Uncharacterised protein family (UPF0270) MC60_008680 PF00485 Phosphoribulokinase / Uridine kinase family MC60_008695 PF02566 OsmC-like protein MC60_008700 PF13545 Crp-like helix-turn-helix domain MC60_008700 PF00027 Cyclic nucleotide-binding domain MC60_008705 PF13847 Methyltransferase domain MC60_008710 PF08329 Chitinase A, N-terminal domain MC60_008710 PF00704 Glycosyl hydrolases family 18 MC60_008715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_008715 PF00512 His Kinase A (phospho-acceptor) domain MC60_008715 PF00989 PAS fold MC60_008720 PF12832 MFS_1 like family MC60_008725 PF00593 TonB dependent receptor MC60_008725 PF07715 TonB-dependent Receptor Plug Domain MC60_008745 PF01243 Pyridoxamine 5'-phosphate oxidase MC60_008750 PF06228 Haem utilisation ChuX/HutX MC60_008760 PF01032 FecCD transport family MC60_008765 PF00005 ABC transporter MC60_008775 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MC60_008775 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MC60_008775 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MC60_008780 PF01370 NAD dependent epimerase/dehydratase family MC60_008785 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase MC60_008795 PF00535 Glycosyl transferase family 2 MC60_008805 PF01464 Transglycosylase SLT domain MC60_008810 PF12848 ABC transporter MC60_008810 PF00005 ABC transporter MC60_008820 PF00860 Permease family MC60_008825 PF00226 DnaJ domain MC60_008825 PF05099 Tellurite resistance protein TerB MC60_008830 PF00483 Nucleotidyl transferase MC60_008835 PF01636 Phosphotransferase enzyme family MC60_008840 PF03968 OstA-like protein MC60_008840 PF04453 LPS transport system D MC60_008845 PF09312 SurA N-terminal domain MC60_008845 PF00639 PPIC-type PPIASE domain MC60_008850 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MC60_008855 PF00398 Ribosomal RNA adenine dimethylase MC60_008860 PF04379 ApaG domain MC60_008865 PF00149 Calcineurin-like phosphoesterase MC60_008875 PF00296 Luciferase-like monooxygenase MC60_008890 PF01926 50S ribosome-binding GTPase MC60_008890 PF01018 GTP1/OBG MC60_008895 PF01016 Ribosomal L27 protein MC60_008900 PF00829 Ribosomal prokaryotic L21 protein MC60_008905 PF00348 Polyprenyl synthetase MC60_008910 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) MC60_008915 PF01145 SPFH domain / Band 7 family MC60_008920 PF12221 Bacterial membrane protein N terminal MC60_008920 PF01145 SPFH domain / Band 7 family MC60_008925 PF16360 GTP-binding GTPase Middle Region MC60_008925 PF13167 GTP-binding GTPase N-terminal MC60_008925 PF01926 50S ribosome-binding GTPase MC60_008930 PF17209 Hfq protein MC60_008940 PF01119 DNA mismatch repair protein, C-terminal domain MC60_008940 PF08676 MutL C terminal dimerisation domain MC60_008945 PF01520 N-acetylmuramoyl-L-alanine amidase MC60_008950 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MC60_008955 PF03853 YjeF-related protein N-terminus MC60_008955 PF01256 Carbohydrate kinase MC60_008960 PF08331 Domain of unknown function (DUF1730) MC60_008965 PF00480 ROK family MC60_008975 PF00005 ABC transporter MC60_008975 PF09383 NIL domain MC60_008980 PF00528 Binding-protein-dependent transport system inner membrane component MC60_008985 PF03180 NLPA lipoprotein MC60_008990 PF02357 Transcription termination factor nusG MC60_008995 PF13426 PAS domain MC60_008995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_008995 PF08447 PAS fold MC60_009000 PF03707 Bacterial signalling protein N terminal repeat MC60_009000 PF00990 Diguanylate cyclase, GGDEF domain MC60_009000 PF00563 EAL domain MC60_009005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_009005 PF00512 His Kinase A (phospho-acceptor) domain MC60_009005 PF09456 RcsC Alpha-Beta-Loop (ABL) MC60_009005 PF00072 Response regulator receiver domain MC60_009015 PF01966 HD domain MC60_009020 PF00072 Response regulator receiver domain MC60_009020 PF00989 PAS fold MC60_009020 PF01627 Hpt domain MC60_009020 PF18415 Histidine kinase receptor ArcB trans-membrane domain MC60_009020 PF00512 His Kinase A (phospho-acceptor) domain MC60_009020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_009040 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) MC60_009045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_009045 PF03466 LysR substrate binding domain MC60_009055 PF01259 SAICAR synthetase MC60_009060 PF06804 NlpB/DapX lipoprotein MC60_009065 PF00701 Dihydrodipicolinate synthetase family MC60_009070 PF01842 ACT domain MC60_009075 PF00578 AhpC/TSA family MC60_009080 PF03887 YfbU domain MC60_009085 PF04217 Protein of unknown function, DUF412 MC60_009090 PF00871 Acetokinase family MC60_009095 PF07085 DRTGG domain MC60_009095 PF01515 Phosphate acetyl/butaryl transferase MC60_009100 PF10369 Small subunit of acetolactate synthase MC60_009105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MC60_009105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MC60_009105 PF00205 Thiamine pyrophosphate enzyme, central domain MC60_009120 PF01569 PAP2 superfamily MC60_009130 PF00682 HMGL-like MC60_009130 PF08502 LeuA allosteric (dimerisation) domain MC60_009135 PF00180 Isocitrate/isopropylmalate dehydrogenase MC60_009140 PF00330 Aconitase family (aconitate hydratase) MC60_009145 PF00694 Aconitase C-terminal domain MC60_009165 PF00528 Binding-protein-dependent transport system inner membrane component MC60_009170 PF00005 ABC transporter MC60_009175 PF13638 PIN domain MC60_009175 PF02562 PhoH-like protein MC60_009185 PF02867 Ribonucleotide reductase, barrel domain MC60_009185 PF00317 Ribonucleotide reductase, all-alpha domain MC60_009185 PF08343 Ribonucleotide reductase N-terminal MC60_009215 PF03060 Nitronate monooxygenase MC60_009220 PF00445 Ribonuclease T2 family MC60_009240 PF16527 Two-component sensor protein CpxA, periplasmic domain MC60_009240 PF00672 HAMP domain MC60_009240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_009240 PF00512 His Kinase A (phospho-acceptor) domain MC60_009245 PF00486 Transcriptional regulatory protein, C terminal MC60_009245 PF00072 Response regulator receiver domain MC60_009250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MC60_009255 PF00005 ABC transporter MC60_009255 PF02687 FtsX-like permease family MC60_009255 PF12704 MacB-like periplasmic core domain MC60_009265 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase MC60_009285 PF03783 Curli production assembly/transport component CsgG MC60_009295 PF05643 Putative bacterial lipoprotein (DUF799) MC60_009300 PF00990 Diguanylate cyclase, GGDEF domain MC60_009305 PF00271 Helicase conserved C-terminal domain MC60_009305 PF00270 DEAD/DEAH box helicase MC60_009310 PF00970 Oxidoreductase FAD-binding domain MC60_009310 PF00111 2Fe-2S iron-sulfur cluster binding domain MC60_009310 PF00175 Oxidoreductase NAD-binding domain MC60_009315 PF02311 AraC-like ligand binding domain MC60_009315 PF12833 Helix-turn-helix domain MC60_009335 PF00753 Metallo-beta-lactamase superfamily MC60_009340 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MC60_009345 PF01425 Amidase MC60_009350 PF04371 Porphyromonas-type peptidyl-arginine deiminase MC60_009355 PF03466 LysR substrate binding domain MC60_009355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_009365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MC60_009370 PF00583 Acetyltransferase (GNAT) family MC60_009375 PF01758 Sodium Bile acid symporter family MC60_009385 PF03144 Elongation factor Tu domain 2 MC60_009385 PF16658 Class II release factor RF3, C-terminal domain MC60_009385 PF00009 Elongation factor Tu GTP binding domain MC60_009390 PF00072 Response regulator receiver domain MC60_009390 PF00990 Diguanylate cyclase, GGDEF domain MC60_009395 PF00563 EAL domain MC60_009395 PF08448 PAS fold MC60_009395 PF00990 Diguanylate cyclase, GGDEF domain MC60_009400 PF05762 VWA domain containing CoxE-like protein MC60_009405 PF07728 AAA domain (dynein-related subfamily) MC60_009405 PF12592 Protein of unknown function (DUF3763) MC60_009405 PF17868 AAA lid domain MC60_009415 PF00583 Acetyltransferase (GNAT) family MC60_009425 PF00501 AMP-binding enzyme MC60_009435 PF01177 Asp/Glu/Hydantoin racemase MC60_009450 PF00392 Bacterial regulatory proteins, gntR family MC60_009450 PF00155 Aminotransferase class I and II MC60_009465 PF00209 Sodium:neurotransmitter symporter family MC60_009470 PF00209 Sodium:neurotransmitter symporter family MC60_009490 PF07690 Major Facilitator Superfamily MC60_009500 PF01037 Lrp/AsnC ligand binding domain MC60_009515 PF01047 MarR family MC60_009520 PF00107 Zinc-binding dehydrogenase MC60_009520 PF16884 N-terminal domain of oxidoreductase MC60_009525 PF00293 NUDIX domain MC60_009540 PF01641 SelR domain MC60_009545 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MC60_009545 PF00128 Alpha amylase, catalytic domain MC60_009550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MC60_009550 PF02806 Alpha amylase, C-terminal all-beta domain MC60_009550 PF00128 Alpha amylase, catalytic domain MC60_009555 PF02446 4-alpha-glucanotransferase MC60_009560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MC60_009560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MC60_009565 PF01263 Aldose 1-epimerase MC60_009570 PF02445 Quinolinate synthetase A protein MC60_009575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_009575 PF00672 HAMP domain MC60_009650 PF16331 TolA binding protein trimerisation MC60_009650 PF13174 Tetratricopeptide repeat MC60_009655 PF00691 OmpA family MC60_009660 PF04052 TolB amino-terminal domain MC60_009660 PF07676 WD40-like Beta Propeller Repeat MC60_009670 PF02472 Biopolymer transport protein ExbD/TolR MC60_009675 PF01618 MotA/TolQ/ExbB proton channel family MC60_009680 PF03061 Thioesterase superfamily MC60_009685 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) MC60_009690 PF08173 Membrane bound YbgT-like protein MC60_009695 PF02322 Cytochrome bd terminal oxidase subunit II MC60_009700 PF01654 Cytochrome bd terminal oxidase subunit I MC60_009705 PF05496 Holliday junction DNA helicase RuvB P-loop domain MC60_009705 PF05491 RuvB C-terminal winged helix domain MC60_009705 PF17864 RuvB AAA lid domain MC60_009710 PF07499 RuvA, C-terminal domain MC60_009710 PF01330 RuvA N terminal domain MC60_009715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_009715 PF00672 HAMP domain MC60_009720 PF03129 Anticodon binding domain MC60_009720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MC60_009720 PF04073 Aminoacyl-tRNA editing domain MC60_009725 PF00929 Exonuclease MC60_009730 PF00106 short chain dehydrogenase MC60_009745 PF00378 Enoyl-CoA hydratase/isomerase MC60_009750 PF10952 Protein of unknown function (DUF2753) MC60_009760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC60_009770 PF08447 PAS fold MC60_009770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_009775 PF00271 Helicase conserved C-terminal domain MC60_009775 PF00270 DEAD/DEAH box helicase MC60_009780 PF08534 Redoxin MC60_009785 PF00403 Heavy-metal-associated domain MC60_009790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MC60_009790 PF18494 Pullulanase Ins domain MC60_009790 PF17967 Pullulanase N2 domain MC60_009790 PF11852 Domain of unknown function (DUF3372) MC60_009790 PF03714 Bacterial pullanase-associated domain MC60_009805 PF02583 Metal-sensitive transcriptional repressor MC60_009810 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) MC60_009815 PF01270 Glycosyl hydrolases family 8 MC60_009820 PF03170 Bacterial cellulose synthase subunit MC60_009830 PF06564 Cellulose biosynthesis protein BcsQ MC60_009840 PF11658 Cellulose biosynthesis protein BcsG MC60_009845 PF00155 Aminotransferase class I and II MC60_009850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_009850 PF03466 LysR substrate binding domain MC60_009860 PF04055 Radical SAM superfamily MC60_009865 PF11230 Protein of unknown function (DUF3029) MC60_009890 PF17200 Single Cache domain 2 MC60_009890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_009890 PF00672 HAMP domain MC60_009895 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading MC60_009895 PF18416 N-acetylglucosamine binding protein domain 2 MC60_009900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_009900 PF03466 LysR substrate binding domain MC60_009905 PF12857 TOBE-like domain MC60_009905 PF00005 ABC transporter MC60_009910 PF00528 Binding-protein-dependent transport system inner membrane component MC60_009915 PF00528 Binding-protein-dependent transport system inner membrane component MC60_009960 PF12137 RNA polymerase recycling family C-terminal MC60_009960 PF00176 SNF2 family N-terminal domain MC60_009960 PF18339 RapA N-terminal Tudor like domain 1 MC60_009960 PF00271 Helicase conserved C-terminal domain MC60_009960 PF18337 RapA N-terminal Tudor like domain MC60_009965 PF00849 RNA pseudouridylate synthase MC60_009975 PF00990 Diguanylate cyclase, GGDEF domain MC60_009975 PF00563 EAL domain MC60_009975 PF03707 Bacterial signalling protein N terminal repeat MC60_009985 PF00118 TCP-1/cpn60 chaperonin family MC60_009990 PF00166 Chaperonin 10 Kd subunit MC60_010000 PF04186 FxsA cytoplasmic membrane protein MC60_010005 PF10415 Fumarase C C-terminus MC60_010005 PF00206 Lyase MC60_010010 PF03605 Anaerobic c4-dicarboxylate membrane transporter MC60_010015 PF04262 Glutamate-cysteine ligase MC60_010020 PF05193 Peptidase M16 inactive domain MC60_010020 PF00675 Insulinase (Peptidase family M16) MC60_010025 PF09335 SNARE associated Golgi protein MC60_010030 PF00550 Phosphopantetheine attachment site MC60_010030 PF00698 Acyl transferase domain MC60_010030 PF08240 Alcohol dehydrogenase GroES-like domain MC60_010030 PF14765 Polyketide synthase dehydratase MC60_010030 PF08990 Erythronolide synthase docking MC60_010030 PF08659 KR domain MC60_010030 PF16197 Ketoacyl-synthetase C-terminal extension MC60_010030 PF00109 Beta-ketoacyl synthase, N-terminal domain MC60_010030 PF02801 Beta-ketoacyl synthase, C-terminal domain MC60_010040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC60_010060 PF00175 Oxidoreductase NAD-binding domain MC60_010060 PF00970 Oxidoreductase FAD-binding domain MC60_010065 PF03948 Ribosomal protein L9, C-terminal domain MC60_010065 PF01281 Ribosomal protein L9, N-terminal domain MC60_010070 PF01084 Ribosomal protein S18 MC60_010075 PF01250 Ribosomal protein S6 MC60_010080 PF01566 Natural resistance-associated macrophage protein MC60_010085 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MC60_010085 PF02272 DHHA1 domain MC60_010085 PF01411 tRNA synthetases class II (A) MC60_010090 PF13673 Acetyltransferase (GNAT) domain MC60_010100 PF08032 RNA 2'-O ribose methyltransferase substrate binding MC60_010100 PF00588 SpoU rRNA Methylase family MC60_010105 PF00575 S1 RNA binding domain MC60_010105 PF00773 RNB domain MC60_010105 PF08206 Ribonuclease B OB domain MC60_010105 PF08461 Ribonuclease R winged-helix domain MC60_010105 PF17876 Cold shock domain MC60_010110 PF00990 Diguanylate cyclase, GGDEF domain MC60_010115 PF02664 S-Ribosylhomocysteinase (LuxS) MC60_010125 PF00543 Nitrogen regulatory protein P-II MC60_010130 PF02540 NAD synthase MC60_010130 PF00795 Carbon-nitrogen hydrolase MC60_010165 PF07963 Prokaryotic N-terminal methylation motif MC60_010165 PF14245 Type IV pilin PilA MC60_010170 PF02401 LytB protein MC60_010175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MC60_010180 PF01252 Signal peptidase (SPase) II MC60_010185 PF06827 Zinc finger found in FPG and IleRS MC60_010185 PF00133 tRNA synthetases class I (I, L, M and V) MC60_010185 PF08264 Anticodon-binding domain of tRNA MC60_010190 PF01687 Riboflavin kinase MC60_010190 PF06574 FAD synthetase MC60_010195 PF03023 Lipid II flippase MurJ MC60_010200 PF01649 Ribosomal protein S20 MC60_010205 PF01022 Bacterial regulatory protein, arsR family MC60_010210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_010210 PF03466 LysR substrate binding domain MC60_010220 PF06965 Na+/H+ antiporter 1 MC60_010225 PF00303 Thymidylate synthase MC60_010230 PF01790 Prolipoprotein diacylglyceryl transferase MC60_010235 PF05524 PEP-utilising enzyme, N-terminal MC60_010235 PF00391 PEP-utilising enzyme, mobile domain MC60_010235 PF02896 PEP-utilising enzyme, TIM barrel domain MC60_010235 PF01590 GAF domain MC60_010240 PF00293 NUDIX domain MC60_010245 PF02976 DNA mismatch repair enzyme MutH MC60_010255 PF01245 Ribosomal protein L19 MC60_010260 PF01746 tRNA (Guanine-1)-methyltransferase MC60_010265 PF01782 RimM N-terminal domain MC60_010265 PF05239 PRC-barrel domain MC60_010270 PF00886 Ribosomal protein S16 MC60_010275 PF00448 SRP54-type protein, GTPase domain MC60_010275 PF02881 SRP54-type protein, helical bundle domain MC60_010275 PF02978 Signal peptide binding domain MC60_010280 PF01578 Cytochrome C assembly protein MC60_010285 PF00571 CBS domain MC60_010285 PF03471 Transporter associated domain MC60_010285 PF01595 Cyclin M transmembrane N-terminal domain MC60_010290 PF02082 Transcriptional regulator MC60_010295 PF00042 Globin MC60_010295 PF00175 Oxidoreductase NAD-binding domain MC60_010295 PF00970 Oxidoreductase FAD-binding domain MC60_010300 PF08238 Sel1 repeat MC60_010305 PF00056 lactate/malate dehydrogenase, NAD binding domain MC60_010305 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MC60_010310 PF00528 Binding-protein-dependent transport system inner membrane component MC60_010315 PF00528 Binding-protein-dependent transport system inner membrane component MC60_010320 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC60_010325 PF00005 ABC transporter MC60_010330 PF02863 Arginine repressor, C-terminal domain MC60_010330 PF01316 Arginine repressor, DNA binding domain MC60_010335 PF04261 Dyp-type peroxidase family MC60_010340 PF08402 TOBE domain MC60_010340 PF00005 ABC transporter MC60_010355 PF00543 Nitrogen regulatory protein P-II MC60_010360 PF00472 RF-1 domain MC60_010365 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MC60_010365 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MC60_010370 PF07670 Nucleoside recognition MC60_010370 PF07662 Na+ dependent nucleoside transporter C-terminus MC60_010370 PF01773 Na+ dependent nucleoside transporter N-terminus MC60_010375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_010375 PF03466 LysR substrate binding domain MC60_010380 PF00255 Glutathione peroxidase MC60_010390 PF02595 Glycerate kinase family MC60_010395 PF02447 GntP family permease MC60_010400 PF17853 GGDEF-like domain MC60_010400 PF13556 PucR C-terminal helix-turn-helix domain MC60_010400 PF05651 Putative sugar diacid recognition MC60_010405 PF06062 Uncharacterised protein family (UPF0231) MC60_010425 PF02594 Uncharacterised ACR, YggU family COG1872 MC60_010430 PF02325 YGGT family MC60_010435 PF03807 NADP oxidoreductase coenzyme F420-dependent MC60_010435 PF14748 Pyrroline-5-carboxylate reductase dimerisation MC60_010440 PF01168 Alanine racemase, N-terminal domain MC60_010445 PF00437 Type II/IV secretion system protein MC60_010450 PF00437 Type II/IV secretion system protein MC60_010455 PF03883 Peroxide stress protein YaaA MC60_010460 PF00270 DEAD/DEAH box helicase MC60_010460 PF00271 Helicase conserved C-terminal domain MC60_010465 PF05175 Methyltransferase small domain MC60_010470 PF05525 Branched-chain amino acid transport protein MC60_010485 PF01475 Ferric uptake regulator family MC60_010490 PF01207 Dihydrouridine synthase (Dus) MC60_010505 PF00216 Bacterial DNA-binding protein MC60_010510 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ MC60_010515 PF07238 PilZ domain MC60_010520 PF18073 Rubredoxin metal binding domain MC60_010535 PF18429 Domain of unknown function (DUF5609) MC60_010545 PF13426 PAS domain MC60_010545 PF08447 PAS fold MC60_010545 PF00563 EAL domain MC60_010545 PF08448 PAS fold MC60_010545 PF00990 Diguanylate cyclase, GGDEF domain MC60_010545 PF05231 MASE1 MC60_010550 PF16998 17 kDa outer membrane surface antigen MC60_010550 PF05433 Glycine zipper 2TM domain MC60_010555 PF01048 Phosphorylase superfamily MC60_010560 PF01676 Metalloenzyme superfamily MC60_010565 PF02885 Glycosyl transferase family, helical bundle domain MC60_010565 PF00591 Glycosyl transferase family, a/b domain MC60_010565 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain MC60_010570 PF01791 DeoC/LacD family aldolase MC60_010580 PF01773 Na+ dependent nucleoside transporter N-terminus MC60_010580 PF07662 Na+ dependent nucleoside transporter C-terminus MC60_010580 PF07670 Nucleoside recognition MC60_010585 PF01026 TatD related DNase MC60_010590 PF07963 Prokaryotic N-terminal methylation motif MC60_010590 PF14245 Type IV pilin PilA MC60_010600 PF05958 tRNA (Uracil-5-)-methyltransferase MC60_010600 PF01938 TRAM domain MC60_010610 PF00909 Ammonium Transporter Family MC60_010630 PF03739 Lipopolysaccharide export system permease LptF/LptG MC60_010635 PF03739 Lipopolysaccharide export system permease LptF/LptG MC60_010640 PF02789 Cytosol aminopeptidase family, N-terminal domain MC60_010640 PF00883 Cytosol aminopeptidase family, catalytic domain MC60_010645 PF04364 DNA polymerase III chi subunit, HolC MC60_010650 PF00133 tRNA synthetases class I (I, L, M and V) MC60_010650 PF10458 Valyl tRNA synthetase tRNA binding arm MC60_010650 PF08264 Anticodon-binding domain of tRNA MC60_010655 PF00571 CBS domain MC60_010655 PF03471 Transporter associated domain MC60_010655 PF01595 Cyclin M transmembrane N-terminal domain MC60_010660 PF09335 SNARE associated Golgi protein MC60_010665 PF00768 D-alanyl-D-alanine carboxypeptidase MC60_010700 PF02599 Global regulator protein family MC60_010705 PF13840 ACT domain MC60_010705 PF01842 ACT domain MC60_010705 PF00696 Amino acid kinase family MC60_010710 PF02272 DHHA1 domain MC60_010710 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MC60_010710 PF01411 tRNA synthetases class II (A) MC60_010715 PF02631 RecX family MC60_010720 PF00154 recA bacterial DNA recombination protein MC60_010725 PF02464 Competence-damaged protein MC60_010735 PF00488 MutS domain V MC60_010735 PF01624 MutS domain I MC60_010735 PF05192 MutS domain III MC60_010735 PF05188 MutS domain II MC60_010735 PF05190 MutS family domain IV MC60_010740 PF02028 BCCT, betaine/carnitine/choline family transporter MC60_010755 PF04222 Protein of unknown function (DUF416) MC60_010760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MC60_010765 PF01476 LysM domain MC60_010765 PF08525 Opacity-associated protein A N-terminal motif MC60_010765 PF01551 Peptidase family M23 MC60_010785 PF01297 Zinc-uptake complex component A periplasmic MC60_010790 PF00005 ABC transporter MC60_010795 PF00950 ABC 3 transport family MC60_010800 PF03466 LysR substrate binding domain MC60_010800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_010810 PF03167 Uracil DNA glycosylase superfamily MC60_010815 PF00892 EamA-like transporter family MC60_010820 PF01541 GIY-YIG catalytic domain MC60_010835 PF04012 PspA/IM30 family MC60_010840 PF01553 Acyltransferase MC60_010860 PF00578 AhpC/TSA family MC60_010870 PF00226 DnaJ domain MC60_010870 PF01556 DnaJ C terminal domain MC60_010870 PF00684 DnaJ central domain MC60_010905 PF00521 DNA gyrase/topoisomerase IV, subunit A MC60_010905 PF03989 DNA gyrase C-terminal domain, beta-propeller MC60_010910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_010910 PF01751 Toprim domain MC60_010910 PF00986 DNA gyrase B subunit, carboxyl terminus MC60_010910 PF00204 DNA gyrase B MC60_010915 PF04632 Fusaric acid resistance protein family MC60_010920 PF00529 HlyD membrane-fusion protein of T1SS MC60_010920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MC60_010925 PF07869 Protein of unknown function (DUF1656) MC60_010935 PF00293 NUDIX domain MC60_010940 PF05728 Uncharacterised protein family (UPF0227) MC60_010945 PF00149 Calcineurin-like phosphoesterase MC60_010950 PF06853 Protein of unknown function (DUF1249) MC60_010955 PF00293 NUDIX domain MC60_010960 PF02321 Outer membrane efflux protein MC60_010965 PF00294 pfkB family carbohydrate kinase MC60_010965 PF01467 Cytidylyltransferase-like MC60_010970 PF03279 Bacterial lipid A biosynthesis acyltransferase MC60_010975 PF00149 Calcineurin-like phosphoesterase MC60_010975 PF02872 5'-nucleotidase, C-terminal domain MC60_010980 PF01810 LysE type translocator MC60_010985 PF00196 Bacterial regulatory proteins, luxR family MC60_010985 PF03472 Autoinducer binding domain MC60_010990 PF00765 Autoinducer synthase MC60_010995 PF03466 LysR substrate binding domain MC60_010995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_011000 PF08206 Ribonuclease B OB domain MC60_011000 PF17876 Cold shock domain MC60_011000 PF00773 RNB domain MC60_011005 PF02378 Phosphotransferase system, EIIC MC60_011005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MC60_011005 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MC60_011010 PF01232 Mannitol dehydrogenase Rossmann domain MC60_011010 PF08125 Mannitol dehydrogenase C-terminal domain MC60_011015 PF05068 Mannitol repressor MC60_011020 PF00999 Sodium/hydrogen exchanger family MC60_011020 PF03471 Transporter associated domain MC60_011020 PF02080 TrkA-C domain MC60_011035 PF01544 CorA-like Mg2+ transporter protein MC60_011040 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 MC60_011055 PF07670 Nucleoside recognition MC60_011055 PF07662 Na+ dependent nucleoside transporter C-terminus MC60_011055 PF01773 Na+ dependent nucleoside transporter N-terminus MC60_011060 PF00270 DEAD/DEAH box helicase MC60_011060 PF00271 Helicase conserved C-terminal domain MC60_011060 PF03880 DbpA RNA binding domain MC60_011080 PF01040 UbiA prenyltransferase family MC60_011085 PF00425 chorismate binding enzyme MC60_011090 PF16582 Middle domain of thiamine pyrophosphate MC60_011090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MC60_011090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MC60_011095 PF12697 Alpha/beta hydrolase family MC60_011100 PF00378 Enoyl-CoA hydratase/isomerase MC60_011105 PF13378 Enolase C-terminal domain-like MC60_011110 PF13193 AMP-binding enzyme C-terminal domain MC60_011110 PF00501 AMP-binding enzyme MC60_011120 PF02698 DUF218 domain MC60_011125 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MC60_011125 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MC60_011135 PF00561 alpha/beta hydrolase fold MC60_011155 PF12793 Sugar transport-related sRNA regulator N-term MC60_011155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC60_011165 PF01053 Cys/Met metabolism PLP-dependent enzyme MC60_011175 PF00465 Iron-containing alcohol dehydrogenase MC60_011190 PF00106 short chain dehydrogenase MC60_011210 PF02308 MgtC family MC60_011215 PF00128 Alpha amylase, catalytic domain MC60_011215 PF02903 Alpha amylase, N-terminal ig-like domain MC60_011215 PF16657 Maltogenic Amylase, C-terminal domain MC60_011225 PF00884 Sulfatase MC60_011230 PF01037 Lrp/AsnC ligand binding domain MC60_011240 PF04204 Homoserine O-succinyltransferase MC60_011250 PF02464 Competence-damaged protein MC60_011250 PF00994 Probable molybdopterin binding domain MC60_011255 PF04307 LexA-binding, inner membrane-associated putative hydrolase MC60_011275 PF07722 Peptidase C26 MC60_011285 PF13419 Haloacid dehalogenase-like hydrolase MC60_011290 PF00589 Phage integrase family MC60_011290 PF02899 Phage integrase, N-terminal SAM-like domain MC60_011300 PF01678 Diaminopimelate epimerase MC60_011305 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MC60_011305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MC60_011315 PF01491 Frataxin-like domain MC60_011320 PF02230 Phospholipase/Carboxylesterase MC60_011325 PF01295 Adenylate cyclase, class-I MC60_011325 PF12633 Adenylate cyclase NT domain MC60_011330 PF03900 Porphobilinogen deaminase, C-terminal domain MC60_011330 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MC60_011335 PF02602 Uroporphyrinogen-III synthase HemD MC60_011340 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase MC60_011345 PF07719 Tetratricopeptide repeat MC60_011345 PF07219 HemY protein N-terminus MC60_011350 PF03692 Putative zinc- or iron-chelating domain MC60_011355 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded MC60_011365 PF08241 Methyltransferase domain MC60_011375 PF00593 TonB dependent receptor MC60_011375 PF07715 TonB-dependent Receptor Plug Domain MC60_011390 PF01638 HxlR-like helix-turn-helix MC60_011395 PF08803 Putative mono-oxygenase ydhR MC60_011410 PF06055 Exopolysaccharide synthesis, ExoD MC60_011415 PF00990 Diguanylate cyclase, GGDEF domain MC60_011420 PF13036 Peptidoglycan-synthase activator LpoB MC60_011425 PF00132 Bacterial transferase hexapeptide (six repeats) MC60_011435 PF04055 Radical SAM superfamily MC60_011435 PF06968 Biotin and Thiamin Synthesis associated domain MC60_011440 PF05690 Thiazole biosynthesis protein ThiG MC60_011450 PF00899 ThiF family MC60_011455 PF02581 Thiamine monophosphate synthase MC60_011460 PF01964 Radical SAM ThiC family MC60_011460 PF13667 ThiC-associated domain MC60_011475 PF00072 Response regulator receiver domain MC60_011475 PF00486 Transcriptional regulatory protein, C terminal MC60_011485 PF18030 RimK PreATP-grasp domain MC60_011485 PF08443 RimK-like ATP-grasp domain MC60_011495 PF02607 B12 binding domain MC60_011495 PF02965 Vitamin B12 dependent methionine synthase, activation domain MC60_011495 PF00809 Pterin binding enzyme MC60_011495 PF02310 B12 binding domain MC60_011495 PF02574 Homocysteine S-methyltransferase MC60_011500 PF00999 Sodium/hydrogen exchanger family MC60_011520 PF04228 Putative neutral zinc metallopeptidase MC60_011530 PF07690 Major Facilitator Superfamily MC60_011535 PF01914 MarC family integral membrane protein MC60_011545 PF01523 Putative modulator of DNA gyrase MC60_011550 PF00795 Carbon-nitrogen hydrolase MC60_011555 PF13502 AsmA-like C-terminal region MC60_011555 PF13116 Protein of unknown function MC60_011560 PF00575 S1 RNA binding domain MC60_011560 PF10150 Ribonuclease E/G family MC60_011565 PF02545 Maf-like protein MC60_011570 PF04093 rod shape-determining protein MreD MC60_011575 PF04085 rod shape-determining protein MreC MC60_011605 PF00114 Pilin (bacterial filament) MC60_011605 PF07963 Prokaryotic N-terminal methylation motif MC60_011610 PF08334 Type II secretion system (T2SS), protein G MC60_011610 PF07963 Prokaryotic N-terminal methylation motif MC60_011625 PF00482 Type II secretion system (T2SS), protein F MC60_011630 PF00437 Type II/IV secretion system protein MC60_011645 PF03958 Bacterial type II/III secretion system short domain MC60_011645 PF00263 Bacterial type II and III secretion system protein MC60_011680 PF00563 EAL domain MC60_011680 PF12792 CSS motif domain associated with EAL MC60_011685 PF01699 Sodium/calcium exchanger protein MC60_011690 PF00221 Aromatic amino acid lyase MC60_011695 PF01175 Urocanase Rossmann-like domain MC60_011695 PF17392 Urocanase C-terminal domain MC60_011695 PF17391 Urocanase N-terminal domain MC60_011700 PF00491 Arginase family MC60_011705 PF01979 Amidohydrolase family MC60_011710 PF07702 UTRA domain MC60_011710 PF00392 Bacterial regulatory proteins, gntR family MC60_011715 PF00484 Carbonic anhydrase MC60_011720 PF00140 Sigma-70 factor, region 1.2 MC60_011720 PF04542 Sigma-70 region 2 MC60_011720 PF04545 Sigma-70, region 4 MC60_011725 PF18075 FtsX extracellular domain MC60_011730 PF00005 ABC transporter MC60_011735 PF00448 SRP54-type protein, GTPase domain MC60_011735 PF02881 SRP54-type protein, helical bundle domain MC60_011750 PF07226 Protein of unknown function (DUF1422) MC60_011755 PF00440 Bacterial regulatory proteins, tetR family MC60_011765 PF13091 PLD-like domain MC60_011770 PF01464 Transglycosylase SLT domain MC60_011770 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC60_011780 PF02416 mttA/Hcf106 family MC60_011785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_011785 PF03466 LysR substrate binding domain MC60_011790 PF01914 MarC family integral membrane protein MC60_011795 PF10678 Protein of unknown function (DUF2492) MC60_011800 PF00375 Sodium:dicarboxylate symporter family MC60_011810 PF03466 LysR substrate binding domain MC60_011810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_011815 PF13533 Biotin-lipoyl like MC60_011820 PF07690 Major Facilitator Superfamily MC60_011825 PF07947 YhhN family MC60_011840 PF16868 NMT1-like family MC60_011845 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MC60_011845 PF00326 Prolyl oligopeptidase family MC60_011860 PF00106 short chain dehydrogenase MC60_011865 PF03466 LysR substrate binding domain MC60_011865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_011870 PF02525 Flavodoxin-like fold MC60_011875 PF00999 Sodium/hydrogen exchanger family MC60_011875 PF02254 TrkA-N domain MC60_011925 PF01196 Ribosomal protein L17 MC60_011930 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MC60_011930 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MC60_011930 PF01000 RNA polymerase Rpb3/RpoA insert domain MC60_011935 PF00163 Ribosomal protein S4/S9 N-terminal domain MC60_011935 PF01479 S4 domain MC60_011940 PF00411 Ribosomal protein S11 MC60_011945 PF00416 Ribosomal protein S13/S18 MC60_011950 PF00444 Ribosomal protein L36 MC60_011955 PF00344 SecY translocase MC60_011960 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MC60_011965 PF00327 Ribosomal protein L30p/L7e MC60_011970 PF03719 Ribosomal protein S5, C-terminal domain MC60_011970 PF00333 Ribosomal protein S5, N-terminal domain MC60_011975 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MC60_011980 PF00347 Ribosomal protein L6 MC60_011985 PF00410 Ribosomal protein S8 MC60_011990 PF00253 Ribosomal protein S14p/S29e MC60_011995 PF00281 Ribosomal protein L5 MC60_011995 PF00673 ribosomal L5P family C-terminus MC60_012000 PF00467 KOW motif MC60_012000 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MC60_012005 PF00238 Ribosomal protein L14p/L23e MC60_012010 PF00366 Ribosomal protein S17 MC60_012015 PF00831 Ribosomal L29 protein MC60_012020 PF00252 Ribosomal protein L16p/L10e MC60_012025 PF07650 KH domain MC60_012025 PF00189 Ribosomal protein S3, C-terminal domain MC60_012030 PF00237 Ribosomal protein L22p/L17e MC60_012035 PF00203 Ribosomal protein S19 MC60_012040 PF00181 Ribosomal Proteins L2, RNA binding domain MC60_012040 PF03947 Ribosomal Proteins L2, C-terminal domain MC60_012045 PF00276 Ribosomal protein L23 MC60_012050 PF00573 Ribosomal protein L4/L1 family MC60_012055 PF00297 Ribosomal protein L3 MC60_012060 PF00338 Ribosomal protein S10p/S20e MC60_012070 PF00512 His Kinase A (phospho-acceptor) domain MC60_012070 PF00672 HAMP domain MC60_012070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_012075 PF00072 Response regulator receiver domain MC60_012075 PF00486 Transcriptional regulatory protein, C terminal MC60_012080 PF03449 Transcription elongation factor, N-terminal MC60_012080 PF01272 Transcription elongation factor, GreA/GreB, C-term MC60_012085 PF17674 HHH domain MC60_012085 PF16921 Tex protein YqgF-like domain MC60_012085 PF09371 Tex-like protein N-terminal domain MC60_012085 PF00575 S1 RNA binding domain MC60_012100 PF00561 alpha/beta hydrolase fold MC60_012105 PF00156 Phosphoribosyl transferase domain MC60_012110 PF01521 Iron-sulphur cluster biosynthesis MC60_012110 PF01106 NifU-like domain MC60_012115 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MC60_012115 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MC60_012120 PF02556 Preprotein translocase subunit SecB MC60_012125 PF00581 Rhodanese-like domain MC60_012130 PF06415 BPG-independent PGAM N-terminus (iPGM_N) MC60_012130 PF01676 Metalloenzyme superfamily MC60_012135 PF01551 Peptidase family M23 MC60_012145 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MC60_012145 PF00356 Bacterial regulatory proteins, lacI family MC60_012160 PF01081 KDPG and KHG aldolase MC60_012165 PF00920 Dehydratase family MC60_012170 PF01202 Shikimate kinase MC60_012175 PF02447 GntP family permease MC60_012180 PF13091 PLD-like domain MC60_012185 PF00271 Helicase conserved C-terminal domain MC60_012185 PF00270 DEAD/DEAH box helicase MC60_012185 PF17191 RecG wedge domain MC60_012195 PF09500 Putative thioesterase (yiiD_Cterm) MC60_012195 PF00583 Acetyltransferase (GNAT) family MC60_012205 PF02580 D-Tyr-tRNA(Tyr) deacylase MC60_012210 PF03631 Virulence factor BrkB MC60_012220 PF03951 Glutamine synthetase, beta-Grasp domain MC60_012220 PF00120 Glutamine synthetase, catalytic domain MC60_012230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_012230 PF00512 His Kinase A (phospho-acceptor) domain MC60_012230 PF00989 PAS fold MC60_012235 PF00158 Sigma-54 interaction domain MC60_012235 PF02954 Bacterial regulatory protein, Fis family MC60_012235 PF00072 Response regulator receiver domain MC60_012240 PF00962 Adenosine/AMP deaminase MC60_012245 PF04055 Radical SAM superfamily MC60_012245 PF06969 HemN C-terminal domain MC60_012250 PF10675 Protein of unknown function (DUF2489) MC60_012255 PF04220 Der GTPase activator (YihI) MC60_012260 PF00034 Cytochrome c MC60_012265 PF01926 50S ribosome-binding GTPase MC60_012270 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MC60_012270 PF08501 Shikimate dehydrogenase substrate binding domain MC60_012270 PF01488 Shikimate / quinate 5-dehydrogenase MC60_012275 PF01218 Coproporphyrinogen III oxidase MC60_012280 PF01300 Telomere recombination MC60_012285 PF01396 Topoisomerase DNA binding C4 zinc finger MC60_012290 PF04361 Protein of unknown function (DUF494) MC60_012295 PF17782 DprA winged helix domain MC60_012295 PF02481 DNA recombination-mediator protein A MC60_012305 PF01327 Polypeptide deformylase MC60_012310 PF02911 Formyl transferase, C-terminal domain MC60_012310 PF00551 Formyl transferase MC60_012315 PF01189 16S rRNA methyltransferase RsmB/F MC60_012315 PF01029 NusB family MC60_012320 PF02080 TrkA-C domain MC60_012320 PF02254 TrkA-N domain MC60_012325 PF02386 Cation transport protein MC60_012330 PF02646 RmuC family MC60_012345 PF02082 Transcriptional regulator MC60_012350 PF00294 pfkB family carbohydrate kinase MC60_012355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_012355 PF03466 LysR substrate binding domain MC60_012360 PF00117 Glutamine amidotransferase class-I MC60_012360 PF02540 NAD synthase MC60_012360 PF00958 GMP synthase C terminal domain MC60_012365 PF00171 Aldehyde dehydrogenase family MC60_012370 PF00202 Aminotransferase class-III MC60_012375 PF07883 Cupin domain MC60_012375 PF01381 Helix-turn-helix MC60_012380 PF00171 Aldehyde dehydrogenase family MC60_012385 PF00892 EamA-like transporter family MC60_012390 PF12833 Helix-turn-helix domain MC60_012395 PF01810 LysE type translocator MC60_012400 PF06206 CpeT/CpcT family (DUF1001) MC60_012405 PF01810 LysE type translocator MC60_012410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_012410 PF03466 LysR substrate binding domain MC60_012430 PF14001 YdfZ protein MC60_012445 PF03466 LysR substrate binding domain MC60_012445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_012460 PF00580 UvrD/REP helicase N-terminal domain MC60_012460 PF13361 UvrD-like helicase C-terminal domain MC60_012495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_012495 PF03466 LysR substrate binding domain MC60_012500 PF00107 Zinc-binding dehydrogenase MC60_012500 PF08240 Alcohol dehydrogenase GroES-like domain MC60_012505 PF00756 Putative esterase MC60_012520 PF03781 Sulfatase-modifying factor enzyme 1 MC60_012520 PF12867 DinB superfamily MC60_012525 PF13593 SBF-like CPA transporter family (DUF4137) MC60_012530 PF13520 Amino acid permease MC60_012535 PF01588 Putative tRNA binding domain MC60_012540 PF13520 Amino acid permease MC60_012545 PF04074 YhcH/YjgK/YiaL MC60_012550 PF02929 Beta galactosidase small chain MC60_012550 PF02837 Glycosyl hydrolases family 2, sugar binding domain MC60_012550 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MC60_012550 PF00703 Glycosyl hydrolases family 2 MC60_012550 PF16353 Domain of unknown function(DUF4981) MC60_012555 PF00356 Bacterial regulatory proteins, lacI family MC60_012590 PF00132 Bacterial transferase hexapeptide (six repeats) MC60_012595 PF01612 3'-5' exonuclease MC60_012595 PF01367 5'-3' exonuclease, C-terminal SAM fold MC60_012595 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MC60_012595 PF00476 DNA polymerase family A MC60_012605 PF06005 Cell division protein ZapB MC60_012615 PF00132 Bacterial transferase hexapeptide (six repeats) MC60_012615 PF06426 Serine acetyltransferase, N-terminal MC60_012620 PF16916 Dimerisation domain of Zinc Transporter MC60_012620 PF01545 Cation efflux family MC60_012625 PF00486 Transcriptional regulatory protein, C terminal MC60_012625 PF00072 Response regulator receiver domain MC60_012630 PF16527 Two-component sensor protein CpxA, periplasmic domain MC60_012630 PF00672 HAMP domain MC60_012630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_012630 PF00512 His Kinase A (phospho-acceptor) domain MC60_012635 PF00588 SpoU rRNA Methylase family MC60_012640 PF01554 MatE MC60_012645 PF02630 SCO1/SenC MC60_012655 PF01726 LexA DNA binding domain MC60_012655 PF00717 Peptidase S24-like MC60_012660 PF01553 Acyltransferase MC60_012665 PF01040 UbiA prenyltransferase family MC60_012670 PF04345 Chorismate lyase MC60_012675 PF03748 Flagellar basal body-associated protein FliL MC60_012695 PF00356 Bacterial regulatory proteins, lacI family MC60_012695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MC60_012700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MC60_012710 PF03611 PTS system sugar-specific permease component MC60_012725 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) MC60_012740 PF01370 NAD dependent epimerase/dehydratase family MC60_012745 PF00440 Bacterial regulatory proteins, tetR family MC60_012745 PF08360 QacR-like protein, C-terminal region MC60_012750 PF00155 Aminotransferase class I and II MC60_012755 PF00107 Zinc-binding dehydrogenase MC60_012755 PF08240 Alcohol dehydrogenase GroES-like domain MC60_012760 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MC60_012765 PF03707 Bacterial signalling protein N terminal repeat MC60_012765 PF00990 Diguanylate cyclase, GGDEF domain MC60_012765 PF00563 EAL domain MC60_012770 PF13361 UvrD-like helicase C-terminal domain MC60_012770 PF00580 UvrD/REP helicase N-terminal domain MC60_012775 PF00266 Aminotransferase class-V MC60_012780 PF02657 Fe-S metabolism associated domain MC60_012785 PF00899 ThiF family MC60_012825 PF01177 Asp/Glu/Hydantoin racemase MC60_012830 PF00593 TonB dependent receptor MC60_012830 PF07715 TonB-dependent Receptor Plug Domain MC60_012835 PF00731 AIR carboxylase MC60_012840 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MC60_012840 PF02222 ATP-grasp domain MC60_012845 PF07690 Major Facilitator Superfamily MC60_012850 PF04397 LytTr DNA-binding domain MC60_012850 PF00072 Response regulator receiver domain MC60_012855 PF06580 Histidine kinase MC60_012855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_012855 PF07694 5TMR of 5TMR-LYT MC60_012865 PF00989 PAS fold MC60_012865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_012865 PF00512 His Kinase A (phospho-acceptor) domain MC60_012865 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC60_012865 PF01627 Hpt domain MC60_012865 PF00072 Response regulator receiver domain MC60_012870 PF00072 Response regulator receiver domain MC60_012870 PF00196 Bacterial regulatory proteins, luxR family MC60_012875 PF16449 Fimbrillin MatB MC60_012880 PF18649 EcpB C-terminal domain MC60_012885 PF16967 E-set like domain MC60_012885 PF15976 CS1-pili formation C-terminal MC60_012900 PF01810 LysE type translocator MC60_012905 PF07690 Major Facilitator Superfamily MC60_012915 PF00210 Ferritin-like domain MC60_012920 PF00990 Diguanylate cyclase, GGDEF domain MC60_012920 PF05230 MASE2 domain MC60_012925 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MC60_012925 PF12241 Trans-2-enoyl-CoA reductase catalytic region MC60_012925 PF07055 Enoyl reductase FAD binding domain MC60_012935 PF00582 Universal stress protein family MC60_012940 PF00579 tRNA synthetases class I (W and Y) MC60_012945 PF03466 LysR substrate binding domain MC60_012945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_012965 PF00892 EamA-like transporter family MC60_012980 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MC60_012990 PF00625 Guanylate kinase MC60_012995 PF01192 RNA polymerase Rpb6 MC60_013000 PF13291 ACT domain MC60_013000 PF04607 Region found in RelA / SpoT proteins MC60_013000 PF02824 TGS domain MC60_013005 PF12105 SpoU, rRNA methylase, C-terminal MC60_013005 PF00588 SpoU rRNA Methylase family MC60_013010 PF00132 Bacterial transferase hexapeptide (six repeats) MC60_013015 PF12146 Serine aminopeptidase, S33 MC60_013050 PF00440 Bacterial regulatory proteins, tetR family MC60_013055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MC60_013060 PF00873 AcrB/AcrD/AcrF family MC60_013065 PF00512 His Kinase A (phospho-acceptor) domain MC60_013065 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC60_013065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_013070 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC60_013070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MC60_013080 PF03814 Potassium-transporting ATPase A subunit MC60_013090 PF02669 K+-transporting ATPase, c chain MC60_013095 PF13493 Domain of unknown function (DUF4118) MC60_013095 PF02702 Osmosensitive K+ channel His kinase sensor domain MC60_013095 PF00512 His Kinase A (phospho-acceptor) domain MC60_013095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_013095 PF13492 GAF domain MC60_013100 PF00486 Transcriptional regulatory protein, C terminal MC60_013100 PF00072 Response regulator receiver domain MC60_013105 PF07690 Major Facilitator Superfamily MC60_013120 PF00155 Aminotransferase class I and II MC60_013125 PF00011 Hsp20/alpha crystallin family MC60_013130 PF00011 Hsp20/alpha crystallin family MC60_013135 PF12706 Beta-lactamase superfamily domain MC60_013140 PF02311 AraC-like ligand binding domain MC60_013140 PF12833 Helix-turn-helix domain MC60_013145 PF00204 DNA gyrase B MC60_013145 PF00986 DNA gyrase B subunit, carboxyl terminus MC60_013145 PF18053 DNA gyrase B subunit insert domain MC60_013145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_013145 PF01751 Toprim domain MC60_013150 PF02463 RecF/RecN/SMC N terminal domain MC60_013155 PF00712 DNA polymerase III beta subunit, N-terminal domain MC60_013155 PF02768 DNA polymerase III beta subunit, C-terminal domain MC60_013155 PF02767 DNA polymerase III beta subunit, central domain MC60_013160 PF11638 DnaA N-terminal domain MC60_013160 PF08299 Bacterial dnaA protein helix-turn-helix MC60_013160 PF00308 Bacterial dnaA protein MC60_013165 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC60_013170 PF00528 Binding-protein-dependent transport system inner membrane component MC60_013180 PF00468 Ribosomal protein L34 MC60_013185 PF00825 Ribonuclease P MC60_013190 PF01809 Putative membrane protein insertion efficiency factor MC60_013195 PF02096 60Kd inner membrane protein MC60_013195 PF14849 YidC periplasmic domain MC60_013200 PF10396 GTP-binding protein TrmE N-terminus MC60_013200 PF12631 MnmE helical domain MC60_013200 PF01926 50S ribosome-binding GTPase MC60_013205 PF00589 Phage integrase family MC60_013205 PF02899 Phage integrase, N-terminal SAM-like domain MC60_013260 PF13657 HipA N-terminal domain MC60_013260 PF07804 HipA-like C-terminal domain MC60_013265 PF01032 FecCD transport family MC60_013270 PF01497 Periplasmic binding protein MC60_013275 PF00005 ABC transporter MC60_013280 PF00005 ABC transporter MC60_013285 PF07715 TonB-dependent Receptor Plug Domain MC60_013285 PF00593 TonB dependent receptor MC60_013290 PF00258 Flavodoxin MC60_013295 PF13932 GidA associated domain MC60_013295 PF01134 Glucose inhibited division protein A MC60_013300 PF02527 rRNA small subunit methyltransferase G MC60_013305 PF13614 AAA domain MC60_013310 PF17762 HTH domain found in ParB protein MC60_013310 PF02195 ParB-like nuclease domain MC60_013320 PF00119 ATP synthase A chain MC60_013325 PF00137 ATP synthase subunit C MC60_013330 PF00430 ATP synthase B/B' CF(0) MC60_013335 PF00213 ATP synthase delta (OSCP) subunit MC60_013340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MC60_013340 PF02874 ATP synthase alpha/beta family, beta-barrel domain MC60_013340 PF00306 ATP synthase alpha/beta chain, C terminal domain MC60_013345 PF00231 ATP synthase MC60_013350 PF02874 ATP synthase alpha/beta family, beta-barrel domain MC60_013350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MC60_013355 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain MC60_013355 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MC60_013360 PF14602 Hexapeptide repeat of succinyl-transferase MC60_013360 PF00132 Bacterial transferase hexapeptide (six repeats) MC60_013360 PF12804 MobA-like NTP transferase domain MC60_013365 PF06123 Inner membrane protein CreD MC60_013370 PF00905 Penicillin binding protein transpeptidase domain MC60_013375 PF00512 His Kinase A (phospho-acceptor) domain MC60_013375 PF00672 HAMP domain MC60_013375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_013380 PF00072 Response regulator receiver domain MC60_013380 PF00486 Transcriptional regulatory protein, C terminal MC60_013385 PF08220 DeoR-like helix-turn-helix domain MC60_013385 PF00455 DeoR C terminal sensor domain MC60_013390 PF01380 SIS domain MC60_013395 PF03472 Autoinducer binding domain MC60_013395 PF00196 Bacterial regulatory proteins, luxR family MC60_013405 PF01618 MotA/TolQ/ExbB proton channel family MC60_013410 PF01618 MotA/TolQ/ExbB proton channel family MC60_013415 PF02472 Biopolymer transport protein ExbD/TolR MC60_013420 PF03544 Gram-negative bacterial TonB protein C-terminal MC60_013455 PF07969 Amidohydrolase family MC60_013460 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MC60_013465 PF01209 ubiE/COQ5 methyltransferase family MC60_013470 PF02036 SCP-2 sterol transfer family MC60_013475 PF03109 ABC1 family MC60_013480 PF02416 mttA/Hcf106 family MC60_013485 PF02416 mttA/Hcf106 family MC60_013490 PF00902 Sec-independent protein translocase protein (TatC) MC60_013495 PF01026 TatD related DNase MC60_013500 PF00490 Delta-aminolevulinic acid dehydratase MC60_013505 PF01432 Peptidase family M3 MC60_013510 PF03707 Bacterial signalling protein N terminal repeat MC60_013510 PF00563 EAL domain MC60_013510 PF00990 Diguanylate cyclase, GGDEF domain MC60_013515 PF04445 Putative SAM-dependent methyltransferase MC60_013525 PF02541 Ppx/GppA phosphatase family MC60_013530 PF00270 DEAD/DEAH box helicase MC60_013530 PF00271 Helicase conserved C-terminal domain MC60_013535 PF00085 Thioredoxin MC60_013540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MC60_013540 PF07498 Rho termination factor, N-terminal domain MC60_013540 PF07497 Rho termination factor, RNA-binding domain MC60_013550 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MC60_013555 PF00175 Oxidoreductase NAD-binding domain MC60_013560 PF04380 Membrane fusogenic activity MC60_013565 PF12262 Bacterial virulence factor lipase N-terminal MC60_013570 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease MC60_013570 PF01694 Rhomboid family MC60_013575 PF00581 Rhodanese-like domain MC60_013580 PF01810 LysE type translocator MC60_013590 PF00005 ABC transporter MC60_013595 PF12399 Branched-chain amino acid ATP-binding cassette transporter MC60_013595 PF00005 ABC transporter MC60_013600 PF11862 Domain of unknown function (DUF3382) MC60_013600 PF02653 Branched-chain amino acid transport system / permease component MC60_013605 PF02653 Branched-chain amino acid transport system / permease component MC60_013610 PF13458 Periplasmic binding protein MC60_013615 PF00356 Bacterial regulatory proteins, lacI family MC60_013620 PF00158 Sigma-54 interaction domain MC60_013620 PF01590 GAF domain MC60_013625 PF00301 Rubredoxin MC60_013625 PF00753 Metallo-beta-lactamase superfamily MC60_013625 PF00258 Flavodoxin MC60_013630 PF18113 Rubredoxin binding C-terminal domain MC60_013630 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC60_013640 PF12801 4Fe-4S binding domain MC60_013650 PF01212 Beta-eliminating lyase MC60_013655 PF03222 Tryptophan/tyrosine permease family MC60_013660 PF03222 Tryptophan/tyrosine permease family MC60_013675 PF00563 EAL domain MC60_013675 PF00360 Phytochrome region MC60_013675 PF01590 GAF domain MC60_013675 PF00990 Diguanylate cyclase, GGDEF domain MC60_013685 PF02092 Glycyl-tRNA synthetase beta subunit MC60_013685 PF05746 DALR anticodon binding domain MC60_013690 PF02091 Glycyl-tRNA synthetase alpha subunit MC60_013695 PF03352 Methyladenine glycosylase MC60_013700 PF00857 Isochorismatase family MC60_013710 PF13488 Glycine zipper MC60_013710 PF00691 OmpA family MC60_013730 PF01042 Endoribonuclease L-PSP MC60_013735 PF01206 Sulfurtransferase TusA MC60_013745 PF01547 Bacterial extracellular solute-binding protein MC60_013750 PF00672 HAMP domain MC60_013750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_013750 PF00512 His Kinase A (phospho-acceptor) domain MC60_013755 PF00486 Transcriptional regulatory protein, C terminal MC60_013755 PF00072 Response regulator receiver domain MC60_013760 PF02803 Thiolase, C-terminal domain MC60_013760 PF00108 Thiolase, N-terminal domain MC60_013765 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MC60_013765 PF00378 Enoyl-CoA hydratase/isomerase MC60_013765 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MC60_013770 PF00501 AMP-binding enzyme MC60_013770 PF13193 AMP-binding enzyme C-terminal domain MC60_013775 PF00557 Metallopeptidase family M24 MC60_013780 PF01205 Uncharacterized protein family UPF0029 MC60_013780 PF09186 Domain of unknown function (DUF1949) MC60_013785 PF02386 Cation transport protein MC60_013790 PF12724 Flavodoxin domain MC60_013820 PF13607 Succinyl-CoA ligase like flavodoxin domain MC60_013820 PF00583 Acetyltransferase (GNAT) family MC60_013820 PF13380 CoA binding domain MC60_013830 PF03466 LysR substrate binding domain MC60_013830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_013835 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MC60_013835 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MC60_013840 PF00342 Phosphoglucose isomerase MC60_013850 PF00924 Mechanosensitive ion channel MC60_013850 PF05552 Conserved TM helix MC60_013860 PF00440 Bacterial regulatory proteins, tetR family MC60_013865 PF00692 dUTPase MC60_013870 PF04127 DNA / pantothenate metabolism flavoprotein MC60_013870 PF02441 Flavoprotein MC60_013875 PF04002 RadC-like JAB domain MC60_013880 PF00830 Ribosomal L28 family MC60_013885 PF00471 Ribosomal protein L33 MC60_013895 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MC60_013895 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MC60_013895 PF06827 Zinc finger found in FPG and IleRS MC60_013900 PF04393 Protein of unknown function (DUF535) MC60_013905 PF01467 Cytidylyltransferase-like MC60_013910 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MC60_013915 PF00535 Glycosyl transferase family 2 MC60_013920 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MC60_013925 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MC60_013935 PF03755 YicC-like family, N-terminal region MC60_013935 PF08340 Domain of unknown function (DUF1732) MC60_013940 PF03725 3' exoribonuclease family, domain 2 MC60_013940 PF01138 3' exoribonuclease family, domain 1 MC60_013945 PF00156 Phosphoribosyl transferase domain MC60_013950 PF00403 Heavy-metal-associated domain MC60_013955 PF09278 MerR, DNA binding MC60_013955 PF00376 MerR family regulatory protein MC60_013960 PF00990 Diguanylate cyclase, GGDEF domain MC60_013960 PF01590 GAF domain MC60_013960 PF00563 EAL domain MC60_013960 PF00360 Phytochrome region MC60_013965 PF06288 Protein of unknown function (DUF1040) MC60_013970 PF13746 4Fe-4S dicluster domain MC60_013970 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase MC60_013970 PF12801 4Fe-4S binding domain MC60_013975 PF01636 Phosphotransferase enzyme family MC60_013980 PF01323 DSBA-like thioredoxin domain MC60_013985 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain MC60_013985 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family MC60_013990 PF00857 Isochorismatase family MC60_014000 PF04463 Protein of unknown function (DUF523) MC60_014005 PF01553 Acyltransferase MC60_014010 PF01553 Acyltransferase MC60_014015 PF01078 Magnesium chelatase, subunit ChlI MC60_014015 PF13335 Magnesium chelatase, subunit ChlI C-terminal MC60_014025 PF00205 Thiamine pyrophosphate enzyme, central domain MC60_014025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MC60_014025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MC60_014035 PF01063 Amino-transferase class IV MC60_014040 PF00920 Dehydratase family MC60_014045 PF00585 C-terminal regulatory domain of Threonine dehydratase MC60_014045 PF00291 Pyridoxal-phosphate dependent enzyme MC60_014050 PF01389 OmpA-like transmembrane domain MC60_014050 PF00691 OmpA family MC60_014060 PF00440 Bacterial regulatory proteins, tetR family MC60_014065 PF00271 Helicase conserved C-terminal domain MC60_014065 PF00270 DEAD/DEAH box helicase MC60_014065 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MC60_014065 PF18074 Primosomal protein N C-terminal domain MC60_014065 PF17764 3′ DNA-binding domain (3′BD) MC60_014070 PF01197 Ribosomal protein L31 MC60_014075 PF13460 NAD(P)H-binding MC60_014075 PF11066 Protein of unknown function (DUF2867) MC60_014080 PF03949 Malic enzyme, NAD binding domain MC60_014080 PF00390 Malic enzyme, N-terminal domain MC60_014090 PF00672 HAMP domain MC60_014090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_014090 PF00512 His Kinase A (phospho-acceptor) domain MC60_014095 PF00486 Transcriptional regulatory protein, C terminal MC60_014095 PF00072 Response regulator receiver domain MC60_014100 PF05958 tRNA (Uracil-5-)-methyltransferase MC60_014115 PF00128 Alpha amylase, catalytic domain MC60_014115 PF02903 Alpha amylase, N-terminal ig-like domain MC60_014130 PF00012 Hsp70 protein MC60_014135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MC60_014135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MC60_014140 PF05981 CreA protein MC60_014155 PF01258 Prokaryotic dksA/traR C4-type zinc finger MC60_014160 PF00120 Glutamine synthetase, catalytic domain MC60_014165 PF00202 Aminotransferase class-III MC60_014170 PF13416 Bacterial extracellular solute-binding protein MC60_014175 PF13416 Bacterial extracellular solute-binding protein MC60_014180 PF08402 TOBE domain MC60_014180 PF00005 ABC transporter MC60_014185 PF00528 Binding-protein-dependent transport system inner membrane component MC60_014190 PF00528 Binding-protein-dependent transport system inner membrane component MC60_014195 PF03475 3-alpha domain MC60_014195 PF03473 MOSC domain MC60_014210 PF03061 Thioesterase superfamily MC60_014215 PF09382 RQC domain MC60_014215 PF00570 HRDC domain MC60_014215 PF16124 RecQ zinc-binding MC60_014215 PF00270 DEAD/DEAH box helicase MC60_014215 PF00271 Helicase conserved C-terminal domain MC60_014220 PF00034 Cytochrome c MC60_014225 PF02696 Uncharacterized ACR, YdiU/UPF0061 family MC60_014235 PF02592 Putative vitamin uptake transporter MC60_014240 PF03737 Aldolase/RraA MC60_014245 PF03448 MgtE intracellular N domain MC60_014245 PF00571 CBS domain MC60_014245 PF01769 Divalent cation transporter MC60_014250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MC60_014250 PF14824 Sirohaem biosynthesis protein central MC60_014250 PF10414 Sirohaem synthase dimerisation region MC60_014255 PF01226 Formate/nitrite transporter MC60_014260 PF13806 Rieske-like [2Fe-2S] domain MC60_014265 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MC60_014265 PF18267 Rubredoxin NAD+ reductase C-terminal domain MC60_014265 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC60_014265 PF04324 BFD-like [2Fe-2S] binding domain MC60_014265 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MC60_014280 PF00005 ABC transporter MC60_014285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MC60_014300 PF07690 Major Facilitator Superfamily MC60_014305 PF10431 C-terminal, D2-small domain, of ClpB protein MC60_014305 PF00004 ATPase family associated with various cellular activities (AAA) MC60_014305 PF07724 AAA domain (Cdc48 subfamily) MC60_014310 PF00227 Proteasome subunit MC60_014320 PF03485 Arginyl tRNA synthetase N terminal domain MC60_014320 PF05746 DALR anticodon binding domain MC60_014320 PF00750 tRNA synthetases class I (R) MC60_014330 PF04545 Sigma-70, region 4 MC60_014330 PF04542 Sigma-70 region 2 MC60_014335 PF12973 ChrR Cupin-like domain MC60_014340 PF02673 Bacitracin resistance protein BacA MC60_014345 PF00248 Aldo/keto reductase family MC60_014350 PF01263 Aldose 1-epimerase MC60_014355 PF10509 Galactokinase galactose-binding signature MC60_014355 PF08544 GHMP kinases C terminal MC60_014355 PF00288 GHMP kinases N terminal domain MC60_014360 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain MC60_014360 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain MC60_014365 PF16363 GDP-mannose 4,6 dehydratase MC60_014370 PF00356 Bacterial regulatory proteins, lacI family MC60_014375 PF00703 Glycosyl hydrolases family 2 MC60_014375 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MC60_014375 PF02837 Glycosyl hydrolases family 2, sugar binding domain MC60_014375 PF02929 Beta galactosidase small chain MC60_014375 PF16353 Domain of unknown function(DUF4981) MC60_014380 PF13407 Periplasmic binding protein domain MC60_014385 PF00005 ABC transporter MC60_014390 PF02653 Branched-chain amino acid transport system / permease component MC60_014395 PF02743 Cache domain MC60_014395 PF00672 HAMP domain MC60_014395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_014410 PF00696 Amino acid kinase family MC60_014415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MC60_014415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MC60_014420 PF03606 C4-dicarboxylate anaerobic carrier MC60_014425 PF02863 Arginine repressor, C-terminal domain MC60_014425 PF01316 Arginine repressor, DNA binding domain MC60_014430 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain MC60_014430 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain MC60_014435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MC60_014435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MC60_014460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_014460 PF00672 HAMP domain MC60_014460 PF02743 Cache domain MC60_014470 PF08212 Lipocalin-like domain MC60_014475 PF12833 Helix-turn-helix domain MC60_014475 PF06719 AraC-type transcriptional regulator N-terminus MC60_014480 PF00465 Iron-containing alcohol dehydrogenase MC60_014485 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MC60_014485 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MC60_014485 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch MC60_014490 PF02233 NAD(P) transhydrogenase beta subunit MC60_014495 PF13309 HTH domain MC60_014495 PF08348 YheO-like PAS domain MC60_014500 PF03313 Serine dehydratase alpha chain MC60_014505 PF13525 Outer membrane lipoprotein MC60_014510 PF01479 S4 domain MC60_014510 PF00849 RNA pseudouridylate synthase MC60_014520 PF10431 C-terminal, D2-small domain, of ClpB protein MC60_014520 PF00004 ATPase family associated with various cellular activities (AAA) MC60_014520 PF07724 AAA domain (Cdc48 subfamily) MC60_014520 PF02861 Clp amino terminal domain, pathogenicity island component MC60_014520 PF17871 AAA lid domain MC60_014530 PF03590 Aspartate-ammonia ligase MC60_014535 PF01037 Lrp/AsnC ligand binding domain MC60_014545 PF00478 IMP dehydrogenase / GMP reductase domain MC60_014545 PF00571 CBS domain MC60_014565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_014565 PF00512 His Kinase A (phospho-acceptor) domain MC60_014575 PF00158 Sigma-54 interaction domain MC60_014575 PF00072 Response regulator receiver domain MC60_014580 PF06496 Protein of unknown function (DUF1097) MC60_014590 PF00174 Oxidoreductase molybdopterin binding domain MC60_014595 PF01794 Ferric reductase like transmembrane component MC60_014610 PF00072 Response regulator receiver domain MC60_014610 PF00486 Transcriptional regulatory protein, C terminal MC60_014615 PF08918 PhoQ Sensor MC60_014615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_014625 PF01568 Molydopterin dinucleotide binding domain MC60_014625 PF00384 Molybdopterin oxidoreductase MC60_014625 PF18364 Molybdopterin oxidoreductase N-terminal domain MC60_014630 PF03264 NapC/NirT cytochrome c family, N-terminal region MC60_014635 PF01751 Toprim domain MC60_014635 PF01131 DNA topoisomerase MC60_014640 PF02386 Cation transport protein MC60_014645 PF02254 TrkA-N domain MC60_014645 PF02080 TrkA-C domain MC60_014650 PF01565 FAD binding domain MC60_014650 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MC60_014655 PF02237 Biotin protein ligase C terminal domain MC60_014655 PF03099 Biotin/lipoate A/B protein ligase family MC60_014655 PF08279 HTH domain MC60_014660 PF00485 Phosphoribulokinase / Uridine kinase family MC60_014675 PF03143 Elongation factor Tu C-terminal domain MC60_014675 PF03144 Elongation factor Tu domain 2 MC60_014675 PF00009 Elongation factor Tu GTP binding domain MC60_014685 PF00584 SecE/Sec61-gamma subunits of protein translocation complex MC60_014690 PF02357 Transcription termination factor nusG MC60_014690 PF00467 KOW motif MC60_014695 PF00298 Ribosomal protein L11, RNA binding domain MC60_014695 PF03946 Ribosomal protein L11, N-terminal domain MC60_014700 PF00687 Ribosomal protein L1p/L10e family MC60_014705 PF00466 Ribosomal protein L10 MC60_014710 PF16320 Ribosomal protein L7/L12 dimerisation domain MC60_014710 PF00542 Ribosomal protein L7/L12 C-terminal domain MC60_014715 PF04560 RNA polymerase Rpb2, domain 7 MC60_014715 PF00562 RNA polymerase Rpb2, domain 6 MC60_014715 PF04561 RNA polymerase Rpb2, domain 2 MC60_014715 PF04563 RNA polymerase beta subunit MC60_014715 PF10385 RNA polymerase beta subunit external 1 domain MC60_014715 PF04565 RNA polymerase Rpb2, domain 3 MC60_014720 PF00623 RNA polymerase Rpb1, domain 2 MC60_014720 PF04998 RNA polymerase Rpb1, domain 5 MC60_014720 PF05000 RNA polymerase Rpb1, domain 4 MC60_014720 PF04983 RNA polymerase Rpb1, domain 3 MC60_014720 PF04997 RNA polymerase Rpb1, domain 1 MC60_014725 PF08348 YheO-like PAS domain MC60_014725 PF13309 HTH domain MC60_014730 PF01042 Endoribonuclease L-PSP MC60_014735 PF02635 DsrE/DsrF-like family MC60_014740 PF02635 DsrE/DsrF-like family MC60_014745 PF04077 DsrH like protein MC60_014750 PF00164 Ribosomal protein S12/S23 MC60_014755 PF00177 Ribosomal protein S7p/S5e MC60_014760 PF03144 Elongation factor Tu domain 2 MC60_014760 PF00009 Elongation factor Tu GTP binding domain MC60_014760 PF03764 Elongation factor G, domain IV MC60_014760 PF14492 Elongation Factor G, domain II MC60_014760 PF00679 Elongation factor G C-terminus MC60_014765 PF03144 Elongation factor Tu domain 2 MC60_014765 PF03143 Elongation factor Tu C-terminal domain MC60_014765 PF00009 Elongation factor Tu GTP binding domain MC60_014805 PF00860 Permease family MC60_014810 PF02733 Dak1 domain MC60_014815 PF02734 DAK2 domain MC60_014820 PF00381 PTS HPr component phosphorylation site MC60_014820 PF05524 PEP-utilising enzyme, N-terminal MC60_014820 PF00391 PEP-utilising enzyme, mobile domain MC60_014820 PF03610 PTS system fructose IIA component MC60_014825 PF00158 Sigma-54 interaction domain MC60_014825 PF00989 PAS fold MC60_014825 PF02954 Bacterial regulatory protein, Fis family MC60_014830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_014830 PF03466 LysR substrate binding domain MC60_014835 PF04371 Porphyromonas-type peptidyl-arginine deiminase MC60_014840 PF00795 Carbon-nitrogen hydrolase MC60_014845 PF13416 Bacterial extracellular solute-binding protein MC60_014850 PF04371 Porphyromonas-type peptidyl-arginine deiminase MC60_014855 PF00106 short chain dehydrogenase MC60_014860 PF01594 AI-2E family transporter MC60_014865 PF00293 NUDIX domain MC60_014890 PF06628 Catalase-related immune-responsive MC60_014890 PF00199 Catalase MC60_014895 PF00583 Acetyltransferase (GNAT) family MC60_014915 PF00072 Response regulator receiver domain MC60_014915 PF00990 Diguanylate cyclase, GGDEF domain MC60_014925 PF00005 ABC transporter MC60_014925 PF08402 TOBE domain MC60_014935 PF00528 Binding-protein-dependent transport system inner membrane component MC60_014950 PF00392 Bacterial regulatory proteins, gntR family MC60_014950 PF07702 UTRA domain MC60_014960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_014960 PF03466 LysR substrate binding domain MC60_014970 PF02678 Pirin MC60_014970 PF17954 Quercetinase C-terminal cupin domain MC60_014975 PF07681 DoxX MC60_014980 PF17946 RecC C-terminal domain MC60_014985 PF00580 UvrD/REP helicase N-terminal domain MC60_014985 PF13361 UvrD-like helicase C-terminal domain MC60_014985 PF12705 PD-(D/E)XK nuclease superfamily MC60_014990 PF13538 UvrD-like helicase C-terminal domain MC60_015000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC60_015010 PF00909 Ammonium Transporter Family MC60_015015 PF00543 Nitrogen regulatory protein P-II MC60_015020 PF00990 Diguanylate cyclase, GGDEF domain MC60_015020 PF08448 PAS fold MC60_015030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_015030 PF00672 HAMP domain MC60_015040 PF00072 Response regulator receiver domain MC60_015040 PF00486 Transcriptional regulatory protein, C terminal MC60_015045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_015045 PF00672 HAMP domain MC60_015045 PF00512 His Kinase A (phospho-acceptor) domain MC60_015050 PF00313 'Cold-shock' DNA-binding domain MC60_015070 PF00436 Single-strand binding protein family MC60_015075 PF00196 Bacterial regulatory proteins, luxR family MC60_015080 PF17755 UvrA DNA-binding domain MC60_015080 PF00005 ABC transporter MC60_015080 PF17760 UvrA interaction domain MC60_015085 PF03922 OmpW family MC60_015090 PF00672 HAMP domain MC60_015090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_015090 PF12729 Four helix bundle sensory module for signal transduction MC60_015105 PF02219 Methylenetetrahydrofolate reductase MC60_015115 PF03594 Benzoate membrane transport protein MC60_015120 PF07883 Cupin domain MC60_015120 PF01381 Helix-turn-helix MC60_015150 PF04363 Protein of unknown function (DUF496) MC60_015160 PF04751 Protein of unknown function (DUF615) MC60_015165 PF01523 Putative modulator of DNA gyrase MC60_015170 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MC60_015175 PF01722 BolA-like protein MC60_015185 PF05494 MlaC protein MC60_015190 PF02470 MlaD protein MC60_015195 PF02405 Permease MlaE MC60_015200 PF00005 ABC transporter MC60_015205 PF00571 CBS domain MC60_015205 PF01380 SIS domain MC60_015220 PF03968 OstA-like protein MC60_015225 PF00005 ABC transporter MC60_015225 PF12399 Branched-chain amino acid ATP-binding cassette transporter MC60_015230 PF00309 Sigma-54 factor, Activator interacting domain (AID) MC60_015230 PF04552 Sigma-54, DNA binding domain MC60_015230 PF04963 Sigma-54 factor, core binding domain MC60_015235 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MC60_015240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MC60_015245 PF03668 P-loop ATPase protein family MC60_015250 PF00381 PTS HPr component phosphorylation site MC60_015260 PF07071 KDGP aldolase MC60_015265 PF03841 L-seryl-tRNA selenium transferase MC60_015270 PF01979 Amidohydrolase family MC60_015300 PF13180 PDZ domain MC60_015305 PF00595 PDZ domain MC60_015305 PF13180 PDZ domain MC60_015315 PF03969 AFG1-like ATPase MC60_015320 PF00572 Ribosomal protein L13 MC60_015325 PF00380 Ribosomal protein S9/S16 MC60_015330 PF00355 Rieske [2Fe-2S] domain MC60_015330 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal MC60_015335 PF00033 Cytochrome b/b6/petB MC60_015335 PF00032 Cytochrome b(C-terminal)/b6/petD MC60_015340 PF02167 Cytochrome C1 family MC60_015345 PF02798 Glutathione S-transferase, N-terminal domain MC60_015345 PF00043 Glutathione S-transferase, C-terminal domain MC60_015350 PF04386 Stringent starvation protein B MC60_015355 PF04972 BON domain MC60_015360 PF13580 SIS domain MC60_015365 PF02021 Uncharacterised protein family UPF0102 MC60_015370 PF04348 LppC putative lipoprotein MC60_015375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MC60_015390 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MC60_015395 PF00813 FliP family MC60_015400 PF01313 Bacterial export proteins, family 3 MC60_015405 PF01311 Bacterial export proteins, family 1 MC60_015410 PF01312 FlhB HrpN YscU SpaS Family MC60_015415 PF00771 FHIPEP family MC60_015420 PF00072 Response regulator receiver domain MC60_015420 PF02954 Bacterial regulatory protein, Fis family MC60_015420 PF00158 Sigma-54 interaction domain MC60_015425 PF02049 Flagellar hook-basal body complex protein FliE MC60_015430 PF01514 Secretory protein of YscJ/FliF family MC60_015430 PF08345 Flagellar M-ring protein C-terminal MC60_015435 PF01706 FliG C-terminal domain MC60_015435 PF14841 FliG middle domain MC60_015435 PF14842 FliG N-terminal domain MC60_015445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MC60_015445 PF18269 T3SS EscN ATPase C-terminal domain MC60_015465 PF13144 Chaperone for flagella basal body P-ring formation MC60_015470 PF00460 Flagella basal body rod protein MC60_015475 PF00460 Flagella basal body rod protein MC60_015475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MC60_015480 PF13861 FlgD Tudor-like domain MC60_015480 PF03963 Flagellar hook capping protein - N-terminal region MC60_015480 PF13860 FlgD Ig-like domain MC60_015485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MC60_015485 PF07559 Flagellar basal body protein FlaE MC60_015485 PF00460 Flagella basal body rod protein MC60_015490 PF00460 Flagella basal body rod protein MC60_015490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MC60_015495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MC60_015495 PF00460 Flagella basal body rod protein MC60_015500 PF02107 Flagellar L-ring protein MC60_015505 PF02119 Flagellar P-ring protein MC60_015515 PF00460 Flagella basal body rod protein MC60_015515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MC60_015520 PF00669 Bacterial flagellin N-terminal helical region MC60_015535 PF00669 Bacterial flagellin N-terminal helical region MC60_015535 PF00700 Bacterial flagellin C-terminal helical region MC60_015540 PF02465 Flagellar hook-associated protein 2 N-terminus MC60_015540 PF07196 Flagellin hook IN motif MC60_015540 PF07195 Flagellar hook-associated protein 2 C-terminus MC60_015545 PF02561 Flagellar protein FliS MC60_015565 PF04545 Sigma-70, region 4 MC60_015565 PF04542 Sigma-70 region 2 MC60_015570 PF01618 MotA/TolQ/ExbB proton channel family MC60_015575 PF00691 OmpA family MC60_015575 PF13677 Membrane MotB of proton-channel complex MotA/MotB MC60_015585 PF01464 Transglycosylase SLT domain MC60_015585 PF01476 LysM domain MC60_015595 PF02381 MraZ protein, putative antitoxin-like MC60_015600 PF01795 MraW methylase family MC60_015605 PF04999 Cell division protein FtsL MC60_015610 PF00905 Penicillin binding protein transpeptidase domain MC60_015610 PF03717 Penicillin-binding Protein dimerisation domain MC60_015615 PF01225 Mur ligase family, catalytic domain MC60_015615 PF02875 Mur ligase family, glutamate ligase domain MC60_015615 PF08245 Mur ligase middle domain MC60_015620 PF02875 Mur ligase family, glutamate ligase domain MC60_015620 PF01225 Mur ligase family, catalytic domain MC60_015620 PF08245 Mur ligase middle domain MC60_015625 PF00953 Glycosyl transferase family 4 MC60_015625 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MC60_015630 PF02875 Mur ligase family, glutamate ligase domain MC60_015630 PF08245 Mur ligase middle domain MC60_015635 PF01098 Cell cycle protein MC60_015640 PF04101 Glycosyltransferase family 28 C-terminal domain MC60_015640 PF03033 Glycosyltransferase family 28 N-terminal domain MC60_015645 PF08245 Mur ligase middle domain MC60_015645 PF02875 Mur ligase family, glutamate ligase domain MC60_015645 PF01225 Mur ligase family, catalytic domain MC60_015650 PF08478 POTRA domain, FtsQ-type MC60_015650 PF03799 Cell division protein FtsQ MC60_015655 PF02491 SHS2 domain inserted in FTSA MC60_015660 PF12327 FtsZ family, C-terminal domain MC60_015660 PF00091 Tubulin/FtsZ family, GTPase domain MC60_015665 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MC60_015675 PF07517 SecA DEAD-like domain MC60_015675 PF02810 SEC-C motif MC60_015675 PF07516 SecA Wing and Scaffold domain MC60_015675 PF01043 SecA preprotein cross-linking domain MC60_015685 PF00293 NUDIX domain MC60_015690 PF03884 DNA gyrase inhibitor YacG MC60_015695 PF07072 Cell division protein MC60_015700 PF01121 Dephospho-CoA kinase MC60_015705 PF01478 Type IV leader peptidase family MC60_015705 PF06750 Bacterial Peptidase A24 N-terminal domain MC60_015710 PF00482 Type II secretion system (T2SS), protein F MC60_015715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MC60_015715 PF00437 Type II/IV secretion system protein MC60_015720 PF07963 Prokaryotic N-terminal methylation motif MC60_015725 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain MC60_015725 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain MC60_015735 PF01510 N-acetylmuramoyl-L-alanine amidase MC60_015745 PF00392 Bacterial regulatory proteins, gntR family MC60_015745 PF07729 FCD domain MC60_015750 PF17831 Pyruvate dehydrogenase E1 component middle domain MC60_015750 PF00456 Transketolase, thiamine diphosphate binding domain MC60_015755 PF00364 Biotin-requiring enzyme MC60_015755 PF02817 e3 binding domain MC60_015755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MC60_015760 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC60_015760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MC60_015770 PF12729 Four helix bundle sensory module for signal transduction MC60_015770 PF00672 HAMP domain MC60_015770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_015775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_015775 PF00672 HAMP domain MC60_015775 PF12729 Four helix bundle sensory module for signal transduction MC60_015780 PF01734 Patatin-like phospholipase MC60_015785 PF06434 Aconitate hydratase 2 N-terminus MC60_015785 PF00330 Aconitase family (aconitate hydratase) MC60_015785 PF11791 Aconitate B N-terminal domain MC60_015790 PF00563 EAL domain MC60_015790 PF12792 CSS motif domain associated with EAL MC60_015795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_015795 PF03466 LysR substrate binding domain MC60_015800 PF01810 LysE type translocator MC60_015805 PF04030 D-arabinono-1,4-lactone oxidase MC60_015805 PF01565 FAD binding domain MC60_015810 PF02492 CobW/HypB/UreG, nucleotide-binding domain MC60_015810 PF07683 Cobalamin synthesis protein cobW C-terminal domain MC60_015815 PF07690 Major Facilitator Superfamily MC60_015825 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MC60_015830 PF02152 Dihydroneopterin aldolase MC60_015835 PF02660 Glycerol-3-phosphate acyltransferase MC60_015880 PF00892 EamA-like transporter family MC60_015885 PF01037 Lrp/AsnC ligand binding domain MC60_015890 PF12464 Maltose acetyltransferase MC60_015890 PF14602 Hexapeptide repeat of succinyl-transferase MC60_015895 PF11941 Domain of unknown function (DUF3459) MC60_015895 PF00128 Alpha amylase, catalytic domain MC60_015900 PF02378 Phosphotransferase system, EIIC MC60_015900 PF00367 phosphotransferase system, EIIB MC60_015905 PF00356 Bacterial regulatory proteins, lacI family MC60_015915 PF01238 Phosphomannose isomerase type I MC60_015920 PF02378 Phosphotransferase system, EIIC MC60_015925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MC60_015930 PF02378 Phosphotransferase system, EIIC MC60_015930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MC60_015935 PF00232 Glycosyl hydrolase family 1 MC60_015940 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit MC60_015945 PF00480 ROK family MC60_015955 PF00356 Bacterial regulatory proteins, lacI family MC60_015965 PF00710 Asparaginase, N-terminal MC60_015965 PF17763 Glutaminase/Asparaginase C-terminal domain MC60_015980 PF02142 MGS-like domain MC60_015985 PF00210 Ferritin-like domain MC60_015990 PF04324 BFD-like [2Fe-2S] binding domain MC60_016000 PF13718 GNAT acetyltransferase 2 MC60_016000 PF05127 Helicase MC60_016000 PF17176 tRNA-binding domain MC60_016000 PF08351 Domain of unknown function (DUF1726) MC60_016005 PF02790 Cytochrome C oxidase subunit II, transmembrane domain MC60_016005 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MC60_016010 PF00115 Cytochrome C and Quinol oxidase polypeptide I MC60_016015 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 MC60_016020 PF00510 Cytochrome c oxidase subunit III MC60_016045 PF01040 UbiA prenyltransferase family MC60_016050 PF00171 Aldehyde dehydrogenase family MC60_016055 PF00528 Binding-protein-dependent transport system inner membrane component MC60_016060 PF00528 Binding-protein-dependent transport system inner membrane component MC60_016065 PF08402 TOBE domain MC60_016065 PF00005 ABC transporter MC60_016070 PF13416 Bacterial extracellular solute-binding protein MC60_016075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_016075 PF03466 LysR substrate binding domain MC60_016080 PF03553 Na+/H+ antiporter family MC60_016120 PF08323 Starch synthase catalytic domain MC60_016120 PF00534 Glycosyl transferases group 1 MC60_016125 PF00483 Nucleotidyl transferase MC60_016130 PF08468 Methyltransferase small domain N-terminal MC60_016130 PF05175 Methyltransferase small domain MC60_016135 PF00701 Dihydrodipicolinate synthetase family MC60_016140 PF00360 Phytochrome region MC60_016140 PF00990 Diguanylate cyclase, GGDEF domain MC60_016140 PF00563 EAL domain MC60_016140 PF01590 GAF domain MC60_016145 PF13419 Haloacid dehalogenase-like hydrolase MC60_016150 PF17209 Hfq protein MC60_016155 PF04403 Paraquat-inducible protein A MC60_016160 PF02470 MlaD protein MC60_016165 PF03886 ABC-type transport auxiliary lipoprotein component MC60_016170 PF00691 OmpA family MC60_016170 PF01389 OmpA-like transmembrane domain MC60_016175 PF00657 GDSL-like Lipase/Acylhydrolase MC60_016185 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain MC60_016185 PF01464 Transglycosylase SLT domain MC60_016190 PF04362 Bacterial Fe(2+) trafficking MC60_016195 PF14815 NUDIX domain MC60_016195 PF00730 HhH-GPD superfamily base excision DNA repair protein MC60_016195 PF00633 Helix-hairpin-helix motif MC60_016195 PF10576 Iron-sulfur binding domain of endonuclease III MC60_016200 PF16537 Type II secretion system protein B MC60_016205 PF01471 Putative peptidoglycan binding domain MC60_016205 PF13401 AAA domain MC60_016210 PF01743 Poly A polymerase head domain MC60_016210 PF12627 Probable RNA and SrmB- binding site of polymerase A MC60_016210 PF01966 HD domain MC60_016215 PF01384 Phosphate transporter family MC60_016220 PF01865 Protein of unknown function DUF47 MC60_016225 PF01928 CYTH domain MC60_016230 PF05433 Glycine zipper 2TM domain MC60_016235 PF00583 Acetyltransferase (GNAT) family MC60_016240 PF01321 Creatinase/Prolidase N-terminal domain MC60_016240 PF00557 Metallopeptidase family M24 MC60_016245 PF00392 Bacterial regulatory proteins, gntR family MC60_016250 PF01293 Phosphoenolpyruvate carboxykinase MC60_016255 PF01430 Hsp33 protein MC60_016260 PF01479 S4 domain MC60_016265 PF11356 Type II secretion system protein C MC60_016270 PF03958 Bacterial type II/III secretion system short domain MC60_016270 PF00263 Bacterial type II and III secretion system protein MC60_016275 PF00437 Type II/IV secretion system protein MC60_016280 PF00482 Type II secretion system (T2SS), protein F MC60_016285 PF08334 Type II secretion system (T2SS), protein G MC60_016285 PF07963 Prokaryotic N-terminal methylation motif MC60_016290 PF07963 Prokaryotic N-terminal methylation motif MC60_016290 PF12019 Type II transport protein GspH MC60_016295 PF07963 Prokaryotic N-terminal methylation motif MC60_016295 PF02501 Type II secretion system (T2SS), protein I MC60_016300 PF11612 Type II secretion system (T2SS), protein J MC60_016300 PF07963 Prokaryotic N-terminal methylation motif MC60_016310 PF03934 Type II secretion system (T2SS), protein K MC60_016315 PF05134 Type II secretion system (T2SS), protein L MC60_016315 PF12693 GspL periplasmic domain MC60_016320 PF04612 Type II secretion system (T2SS), protein M MC60_016325 PF01203 Type II secretion system (T2SS), protein N MC60_016330 PF00196 Bacterial regulatory proteins, luxR family MC60_016335 PF01479 S4 domain MC60_016335 PF00579 tRNA synthetases class I (W and Y) MC60_016340 PF03466 LysR substrate binding domain MC60_016340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_016345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MC60_016350 PF13419 Haloacid dehalogenase-like hydrolase MC60_016355 PF00293 NUDIX domain MC60_016360 PF00459 Inositol monophosphatase family MC60_016365 PF03222 Tryptophan/tyrosine permease family MC60_016370 PF01588 Putative tRNA binding domain MC60_016380 PF01340 Met Apo-repressor, MetJ MC60_016385 PF01053 Cys/Met metabolism PLP-dependent enzyme MC60_016390 PF00742 Homoserine dehydrogenase MC60_016390 PF03447 Homoserine dehydrogenase, NAD binding domain MC60_016390 PF00696 Amino acid kinase family MC60_016395 PF04172 LrgB-like family MC60_016400 PF03788 LrgA family MC60_016405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_016405 PF03466 LysR substrate binding domain MC60_016420 PF00155 Aminotransferase class I and II MC60_016420 PF00392 Bacterial regulatory proteins, gntR family MC60_016440 PF04073 Aminoacyl-tRNA editing domain MC60_016445 PF00563 EAL domain MC60_016445 PF08448 PAS fold MC60_016445 PF00990 Diguanylate cyclase, GGDEF domain MC60_016445 PF05231 MASE1 MC60_016445 PF08447 PAS fold MC60_016445 PF13426 PAS domain MC60_016450 PF00311 Phosphoenolpyruvate carboxylase MC60_016455 PF07687 Peptidase dimerisation domain MC60_016455 PF01546 Peptidase family M20/M25/M40 MC60_016460 PF02774 Semialdehyde dehydrogenase, dimerisation domain MC60_016460 PF01118 Semialdehyde dehydrogenase, NAD binding domain MC60_016465 PF00696 Amino acid kinase family MC60_016470 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MC60_016470 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MC60_016475 PF00764 Arginosuccinate synthase MC60_016480 PF00206 Lyase MC60_016480 PF14698 Argininosuccinate lyase C-terminal MC60_016485 PF03466 LysR substrate binding domain MC60_016485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_016510 PF12464 Maltose acetyltransferase MC60_016510 PF14602 Hexapeptide repeat of succinyl-transferase MC60_016515 PF13194 Domain of unknown function (DUF4010) MC60_016520 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC60_016525 PF00005 ABC transporter MC60_016530 PF00528 Binding-protein-dependent transport system inner membrane component MC60_016535 PF00528 Binding-protein-dependent transport system inner membrane component MC60_016540 PF00291 Pyridoxal-phosphate dependent enzyme MC60_016545 PF00326 Prolyl oligopeptidase family MC60_016545 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MC60_016565 PF08335 GlnD PII-uridylyltransferase MC60_016565 PF03710 Glutamate-ammonia ligase adenylyltransferase MC60_016575 PF00672 HAMP domain MC60_016575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_016575 PF02743 Cache domain MC60_016580 PF00027 Cyclic nucleotide-binding domain MC60_016580 PF00520 Ion transport protein MC60_016585 PF08239 Bacterial SH3 domain MC60_016590 PF09297 NADH pyrophosphatase zinc ribbon domain MC60_016590 PF00293 NUDIX domain MC60_016595 PF01208 Uroporphyrinogen decarboxylase (URO-D) MC60_016600 PF00480 ROK family MC60_016605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MC60_016605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MC60_016610 PF00162 Phosphoglycerate kinase MC60_016615 PF01116 Fructose-bisphosphate aldolase class-II MC60_016620 PF01266 FAD dependent oxidoreductase MC60_016630 PF02683 Cytochrome C biogenesis protein transmembrane region MC60_016630 PF11412 Disulphide bond corrector protein DsbC MC60_016635 PF03091 CutA1 divalent ion tolerance protein MC60_016650 PF03466 LysR substrate binding domain MC60_016650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_016655 PF01571 Aminomethyltransferase folate-binding domain MC60_016660 PF03937 Flavinator of succinate dehydrogenase MC60_016670 PF00890 FAD binding domain MC60_016670 PF02910 Fumarate reductase flavoprotein C-term MC60_016675 PF08281 Sigma-70, region 4 MC60_016675 PF04542 Sigma-70 region 2 MC60_016680 PF03872 Anti sigma-E protein RseA, N-terminal domain MC60_016680 PF03873 Anti sigma-E protein RseA, C-terminal domain MC60_016685 PF03888 MucB/RseB N-terminal domain MC60_016685 PF17188 MucB/RseB C-terminal domain MC60_016695 PF00009 Elongation factor Tu GTP binding domain MC60_016695 PF00679 Elongation factor G C-terminus MC60_016695 PF03144 Elongation factor Tu domain 2 MC60_016695 PF06421 GTP-binding protein LepA C-terminus MC60_016700 PF10502 Signal peptidase, peptidase S26 MC60_016705 PF14622 Ribonuclease-III-like MC60_016705 PF00035 Double-stranded RNA binding motif MC60_016710 PF07650 KH domain MC60_016710 PF01926 50S ribosome-binding GTPase MC60_016715 PF02565 Recombination protein O C terminal MC60_016715 PF11967 Recombination protein O N terminal MC60_016720 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MC60_016725 PF01510 N-acetylmuramoyl-L-alanine amidase MC60_016730 PF07308 Protein of unknown function (DUF1456) MC60_016735 PF01627 Hpt domain MC60_016735 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MC60_016735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_016735 PF00672 HAMP domain MC60_016735 PF00512 His Kinase A (phospho-acceptor) domain MC60_016735 PF00072 Response regulator receiver domain MC60_016740 PF01938 TRAM domain MC60_016740 PF05958 tRNA (Uracil-5-)-methyltransferase MC60_016745 PF04607 Region found in RelA / SpoT proteins MC60_016745 PF13291 ACT domain MC60_016745 PF02824 TGS domain MC60_016750 PF03819 MazG nucleotide pyrophosphohydrolase domain MC60_016755 PF06418 CTP synthase N-terminus MC60_016755 PF00117 Glutamine amidotransferase class-I MC60_016760 PF00113 Enolase, C-terminal TIM barrel domain MC60_016760 PF03952 Enolase, N-terminal domain MC60_016765 PF04977 Septum formation initiator MC60_016770 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MC60_016775 PF02542 YgbB family MC60_016780 PF01142 tRNA pseudouridine synthase D (TruD) MC60_016785 PF01975 Survival protein SurE MC60_016795 PF09335 SNARE associated Golgi protein MC60_016800 PF01551 Peptidase family M23 MC60_016800 PF01476 LysM domain MC60_016805 PF04545 Sigma-70, region 4 MC60_016805 PF04539 Sigma-70 region 3 MC60_016805 PF00140 Sigma-70 factor, region 1.2 MC60_016805 PF04542 Sigma-70 region 2 MC60_016810 PF00814 Glycoprotease family MC60_016815 PF01165 Ribosomal protein S21 MC60_016820 PF09424 Yqey-like protein MC60_016825 PF10410 DnaB-helicase binding domain of primase MC60_016825 PF08278 DNA primase DnaG DnaB-binding MC60_016825 PF08275 DNA primase catalytic core, N-terminal domain MC60_016825 PF01807 CHC2 zinc finger MC60_016830 PF04539 Sigma-70 region 3 MC60_016830 PF04546 Sigma-70, non-essential region MC60_016830 PF03979 Sigma-70 factor, region 1.1 MC60_016830 PF00140 Sigma-70 factor, region 1.2 MC60_016830 PF04542 Sigma-70 region 2 MC60_016830 PF04545 Sigma-70, region 4 MC60_016840 PF02661 Fic/DOC family MC60_016840 PF13784 Fic/DOC family N-terminal MC60_016870 PF13362 Toprim domain MC60_016870 PF18818 Metallopeptidase superfamily domain MC60_016870 PF08401 Domain of unknown function (DUF1738) MC60_016910 PF00128 Alpha amylase, catalytic domain MC60_016925 PF02843 Phosphoribosylglycinamide synthetase, C domain MC60_016925 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MC60_016925 PF02844 Phosphoribosylglycinamide synthetase, N domain MC60_016930 PF02142 MGS-like domain MC60_016930 PF01808 AICARFT/IMPCHase bienzyme MC60_016935 PF13411 MerR HTH family regulatory protein MC60_016945 PF03889 Alternative ribosome-rescue factor A MC60_016950 PF04055 Radical SAM superfamily MC60_016950 PF06969 HemN C-terminal domain MC60_016955 PF01725 Ham1 family MC60_016960 PF07690 Major Facilitator Superfamily MC60_016965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MC60_016965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MC60_016975 PF01957 NfeD-like C-terminal, partner-binding MC60_016980 PF16200 C-terminal region of band_7 MC60_016980 PF01145 SPFH domain / Band 7 family MC60_016985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MC60_016985 PF14824 Sirohaem biosynthesis protein central MC60_016985 PF10414 Sirohaem synthase dimerisation region MC60_016990 PF01507 Phosphoadenosine phosphosulfate reductase family MC60_016995 PF00009 Elongation factor Tu GTP binding domain MC60_017000 PF02080 TrkA-C domain MC60_017000 PF03600 Citrate transporter MC60_017025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_017025 PF08447 PAS fold MC60_017045 PF00005 ABC transporter MC60_017060 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) MC60_017075 PF00719 Inorganic pyrophosphatase MC60_017080 PF08245 Mur ligase middle domain MC60_017080 PF02875 Mur ligase family, glutamate ligase domain MC60_017080 PF01225 Mur ligase family, catalytic domain MC60_017085 PF02441 Flavoprotein MC60_017090 PF00440 Bacterial regulatory proteins, tetR family MC60_017095 PF00156 Phosphoribosyl transferase domain MC60_017100 PF00005 ABC transporter MC60_017105 PF01061 ABC-2 type transporter MC60_017115 PF02569 Pantoate-beta-alanine ligase MC60_017120 PF02548 Ketopantoate hydroxymethyltransferase MC60_017125 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MC60_017130 PF01743 Poly A polymerase head domain MC60_017130 PF12627 Probable RNA and SrmB- binding site of polymerase A MC60_017130 PF12626 Polymerase A arginine-rich C-terminus MC60_017135 PF00749 tRNA synthetases class I (E and Q), catalytic domain MC60_017140 PF01258 Prokaryotic dksA/traR C4-type zinc finger MC60_017145 PF17746 SfsA N-terminal OB domain MC60_017145 PF03749 Sugar fermentation stimulation protein RE domain MC60_017155 PF08482 ATP-dependent helicase C-terminal MC60_017155 PF00271 Helicase conserved C-terminal domain MC60_017155 PF04408 Helicase associated domain (HA2) MC60_017155 PF00270 DEAD/DEAH box helicase MC60_017160 PF00905 Penicillin binding protein transpeptidase domain MC60_017160 PF00912 Transglycosylase MC60_017160 PF14814 Bifunctional transglycosylase second domain MC60_017165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC60_017170 PF00893 Small Multidrug Resistance protein MC60_017175 PF00893 Small Multidrug Resistance protein MC60_017180 PF03466 LysR substrate binding domain MC60_017180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_017190 PF01569 PAP2 superfamily MC60_017205 PF00202 Aminotransferase class-III MC60_017210 PF00654 Voltage gated chloride channel MC60_017220 PF01521 Iron-sulphur cluster biosynthesis MC60_017245 PF01810 LysE type translocator MC60_017250 PF02954 Bacterial regulatory protein, Fis family MC60_017255 PF01207 Dihydrouridine synthase (Dus) MC60_017265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MC60_017295 PF00072 Response regulator receiver domain MC60_017300 PF00854 POT family MC60_017305 PF00483 Nucleotidyl transferase MC60_017315 PF00459 Inositol monophosphatase family MC60_017320 PF03795 YCII-related domain MC60_017325 PF04279 Intracellular septation protein A MC60_017330 PF00282 Pyridoxal-dependent decarboxylase conserved domain MC60_017335 PF03006 Haemolysin-III related MC60_017340 PF02080 TrkA-C domain MC60_017340 PF06826 Predicted Permease Membrane Region MC60_017370 PF07690 Major Facilitator Superfamily MC60_017375 PF03466 LysR substrate binding domain MC60_017375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_017380 PF04151 Bacterial pre-peptidase C-terminal domain MC60_017380 PF07504 Fungalysin/Thermolysin Propeptide Motif MC60_017380 PF01447 Thermolysin metallopeptidase, catalytic domain MC60_017380 PF02868 Thermolysin metallopeptidase, alpha-helical domain MC60_017380 PF03413 Peptidase propeptide and YPEB domain MC60_017385 PF13302 Acetyltransferase (GNAT) domain MC60_017390 PF13302 Acetyltransferase (GNAT) domain MC60_017400 PF04074 YhcH/YjgK/YiaL MC60_017405 PF00871 Acetokinase family MC60_017410 PF00924 Mechanosensitive ion channel MC60_017415 PF17969 L,D-transpeptidase C-terminal domain MC60_017415 PF03734 L,D-transpeptidase catalytic domain MC60_017420 PF00474 Sodium:solute symporter family MC60_017430 PF13411 MerR HTH family regulatory protein MC60_017435 PF01939 Endonuclease NucS MC60_017455 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ MC60_017465 PF12848 ABC transporter MC60_017465 PF00005 ABC transporter MC60_017470 PF00571 CBS domain MC60_017470 PF00478 IMP dehydrogenase / GMP reductase domain MC60_017475 PF00267 Gram-negative porin MC60_017480 PF01584 CheW-like domain MC60_017480 PF00072 Response regulator receiver domain MC60_017485 PF13472 GDSL-like Lipase/Acylhydrolase family MC60_017490 PF00005 ABC transporter MC60_017500 PF01370 NAD dependent epimerase/dehydratase family MC60_017500 PF08338 Domain of unknown function (DUF1731) MC60_017505 PF00563 EAL domain MC60_017505 PF12792 CSS motif domain associated with EAL MC60_017510 PF00155 Aminotransferase class I and II MC60_017515 PF04389 Peptidase family M28 MC60_017515 PF01483 Proprotein convertase P-domain MC60_017520 PF02390 Putative methyltransferase MC60_017525 PF04320 Protein with unknown function (DUF469) MC60_017530 PF04960 Glutaminase MC60_017535 PF00581 Rhodanese-like domain MC60_017540 PF06082 Exopolysaccharide biosynthesis protein YbjH MC60_017545 PF06251 Capsule biosynthesis GfcC MC60_017550 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF MC60_017570 PF06004 Bacterial protein of unknown function (DUF903) MC60_017575 PF00005 ABC transporter MC60_017575 PF00664 ABC transporter transmembrane region MC60_017580 PF00561 alpha/beta hydrolase fold MC60_017600 PF00589 Phage integrase family MC60_017620 PF02146 Sir2 family MC60_017640 PF00589 Phage integrase family MC60_017640 PF02899 Phage integrase, N-terminal SAM-like domain MC60_017675 PF00145 C-5 cytosine-specific DNA methylase MC60_017685 PF06877 Regulator of ribonuclease activity B MC60_017690 PF00990 Diguanylate cyclase, GGDEF domain MC60_017690 PF00563 EAL domain MC60_017690 PF03707 Bacterial signalling protein N terminal repeat MC60_017710 PF09905 DNA-binding protein VF530 MC60_017715 PF02666 Phosphatidylserine decarboxylase MC60_017720 PF03193 RsgA GTPase MC60_017725 PF00929 Exonuclease MC60_017765 PF00313 'Cold-shock' DNA-binding domain MC60_017775 PF00672 HAMP domain MC60_017775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_017780 PF00749 tRNA synthetases class I (E and Q), catalytic domain MC60_017785 PF00749 tRNA synthetases class I (E and Q), catalytic domain MC60_017790 PF00749 tRNA synthetases class I (E and Q), catalytic domain MC60_017825 PF00704 Glycosyl hydrolases family 18 MC60_017825 PF06483 Chitinase C MC60_017840 PF02472 Biopolymer transport protein ExbD/TolR MC60_017845 PF01618 MotA/TolQ/ExbB proton channel family MC60_017850 PF01618 MotA/TolQ/ExbB proton channel family MC60_017860 PF00593 TonB dependent receptor MC60_017860 PF07715 TonB-dependent Receptor Plug Domain MC60_017865 PF00528 Binding-protein-dependent transport system inner membrane component MC60_017870 PF00528 Binding-protein-dependent transport system inner membrane component MC60_017870 PF12911 N-terminal TM domain of oligopeptide transport permease C MC60_017875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC60_017880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC60_017880 PF00005 ABC transporter MC60_017885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC60_017885 PF00005 ABC transporter MC60_017895 PF07687 Peptidase dimerisation domain MC60_017895 PF01546 Peptidase family M20/M25/M40 MC60_017905 PF00156 Phosphoribosyl transferase domain MC60_017915 PF07417 Sigma factor-binding transcriptional regulator Crl MC60_017920 PF01472 PUA domain MC60_017920 PF00696 Amino acid kinase family MC60_017925 PF00171 Aldehyde dehydrogenase family MC60_017935 PF00582 Universal stress protein family MC60_017950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MC60_017950 PF04324 BFD-like [2Fe-2S] binding domain MC60_017950 PF01568 Molydopterin dinucleotide binding domain MC60_017950 PF00384 Molybdopterin oxidoreductase MC60_017955 PF10414 Sirohaem synthase dimerisation region MC60_017955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MC60_017955 PF14824 Sirohaem biosynthesis protein central MC60_017965 PF00005 ABC transporter MC60_017970 PF00528 Binding-protein-dependent transport system inner membrane component MC60_017975 PF00005 ABC transporter MC60_017980 PF04324 BFD-like [2Fe-2S] binding domain MC60_017980 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MC60_017980 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MC60_017980 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC60_017980 PF13806 Rieske-like [2Fe-2S] domain MC60_017980 PF18267 Rubredoxin NAD+ reductase C-terminal domain MC60_017985 PF18267 Rubredoxin NAD+ reductase C-terminal domain MC60_017985 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MC60_017985 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MC60_017985 PF13806 Rieske-like [2Fe-2S] domain MC60_017985 PF04324 BFD-like [2Fe-2S] binding domain MC60_017985 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC60_017990 PF00294 pfkB family carbohydrate kinase MC60_017995 PF04227 Indigoidine synthase A like protein MC60_018000 PF00194 Eukaryotic-type carbonic anhydrase MC60_018015 PF00994 Probable molybdopterin binding domain MC60_018025 PF06738 Putative threonine/serine exporter MC60_018030 PF12821 Threonine/Serine exporter, ThrE MC60_018035 PF00186 Dihydrofolate reductase MC60_018040 PF00571 CBS domain MC60_018040 PF00005 ABC transporter MC60_018045 PF00528 Binding-protein-dependent transport system inner membrane component MC60_018050 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MC60_018055 PF01507 Phosphoadenosine phosphosulfate reductase family MC60_018060 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MC60_018060 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MC60_018065 PF00175 Oxidoreductase NAD-binding domain MC60_018065 PF00667 FAD binding domain MC60_018065 PF00258 Flavodoxin MC60_018070 PF02567 Phenazine biosynthesis-like protein MC60_018075 PF00152 tRNA synthetases class II (D, K and N) MC60_018075 PF01336 OB-fold nucleic acid binding domain MC60_018085 PF02743 Cache domain MC60_018085 PF00672 HAMP domain MC60_018085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_018090 PF03616 Sodium/glutamate symporter MC60_018095 PF00710 Asparaginase, N-terminal MC60_018095 PF17763 Glutaminase/Asparaginase C-terminal domain MC60_018100 PF07023 Protein of unknown function (DUF1315) MC60_018105 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MC60_018105 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MC60_018120 PF01343 Peptidase family S49 MC60_018125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MC60_018125 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC60_018130 PF00881 Nitroreductase family MC60_018135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_018135 PF02743 Cache domain MC60_018135 PF00672 HAMP domain MC60_018140 PF00132 Bacterial transferase hexapeptide (six repeats) MC60_018140 PF12464 Maltose acetyltransferase MC60_018150 PF00107 Zinc-binding dehydrogenase MC60_018150 PF08240 Alcohol dehydrogenase GroES-like domain MC60_018155 PF03466 LysR substrate binding domain MC60_018155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_018160 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MC60_018160 PF00367 phosphotransferase system, EIIB MC60_018160 PF02378 Phosphotransferase system, EIIC MC60_018165 PF00474 Sodium:solute symporter family MC60_018170 PF06196 Protein of unknown function (DUF997) MC60_018175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MC60_018175 PF02785 Biotin carboxylase C-terminal domain MC60_018175 PF00289 Biotin carboxylase, N-terminal domain MC60_018180 PF00364 Biotin-requiring enzyme MC60_018185 PF01220 Dehydroquinase class II MC60_018190 PF16177 Acetyl-coenzyme A synthetase N-terminus MC60_018190 PF00501 AMP-binding enzyme MC60_018190 PF13193 AMP-binding enzyme C-terminal domain MC60_018195 PF00563 EAL domain MC60_018195 PF00990 Diguanylate cyclase, GGDEF domain MC60_018195 PF03707 Bacterial signalling protein N terminal repeat MC60_018205 PF02613 Nitrate reductase delta subunit MC60_018220 PF00464 Serine hydroxymethyltransferase MC60_018230 PF03477 ATP cone domain MC60_018235 PF01872 RibD C-terminal domain MC60_018235 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MC60_018240 PF00677 Lumazine binding domain MC60_018245 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MC60_018245 PF00925 GTP cyclohydrolase II MC60_018250 PF00885 6,7-dimethyl-8-ribityllumazine synthase MC60_018255 PF01029 NusB family MC60_018260 PF00586 AIR synthase related protein, N-terminal domain MC60_018260 PF02769 AIR synthase related protein, C-terminal domain MC60_018265 PF04608 Phosphatidylglycerophosphatase A MC60_018270 PF00005 ABC transporter MC60_018270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC60_018275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC60_018290 PF02779 Transketolase, pyrimidine binding domain MC60_018290 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MC60_018290 PF02780 Transketolase, C-terminal domain MC60_018295 PF00348 Polyprenyl synthetase MC60_018300 PF02609 Exonuclease VII small subunit MC60_018305 PF01618 MotA/TolQ/ExbB proton channel family MC60_018310 PF13677 Membrane MotB of proton-channel complex MotA/MotB MC60_018310 PF00691 OmpA family MC60_018315 PF01272 Transcription elongation factor, GreA/GreB, C-term MC60_018315 PF03449 Transcription elongation factor, N-terminal MC60_018325 PF01985 CRS1 / YhbY (CRM) domain MC60_018330 PF01728 FtsJ-like methyltransferase MC60_018335 PF17862 AAA+ lid domain MC60_018335 PF06480 FtsH Extracellular MC60_018335 PF01434 Peptidase family M41 MC60_018335 PF00004 ATPase family associated with various cellular activities (AAA) MC60_018340 PF00809 Pterin binding enzyme MC60_018345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MC60_018345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MC60_018345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MC60_018345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MC60_018350 PF00121 Triosephosphate isomerase MC60_018355 PF03840 Preprotein translocase SecG subunit MC60_018370 PF02576 RimP N-terminal domain MC60_018370 PF17384 RimP C-terminal SH3 domain MC60_018375 PF13184 NusA-like KH domain MC60_018375 PF08529 NusA N-terminal domain MC60_018375 PF00575 S1 RNA binding domain MC60_018380 PF00009 Elongation factor Tu GTP binding domain MC60_018380 PF11987 Translation-initiation factor 2 MC60_018380 PF08364 Bacterial translation initiation factor IF-2 associated region MC60_018380 PF04760 Translation initiation factor IF-2, N-terminal region MC60_018385 PF02033 Ribosome-binding factor A MC60_018390 PF01509 TruB family pseudouridylate synthase (N terminal domain) MC60_018390 PF09157 Pseudouridine synthase II TruB, C-terminal MC60_018390 PF16198 tRNA pseudouridylate synthase B C-terminal domain MC60_018395 PF00312 Ribosomal protein S15 MC60_018400 PF00575 S1 RNA binding domain MC60_018400 PF03725 3' exoribonuclease family, domain 2 MC60_018400 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MC60_018400 PF01138 3' exoribonuclease family, domain 1 MC60_018400 PF00013 KH domain MC60_018405 PF07690 Major Facilitator Superfamily MC60_018410 PF02635 DsrE/DsrF-like family MC60_018415 PF06476 Protein of unknown function (DUF1090) MC60_018420 PF12838 4Fe-4S dicluster domain MC60_018430 PF17969 L,D-transpeptidase C-terminal domain MC60_018430 PF03734 L,D-transpeptidase catalytic domain MC60_018440 PF01523 Putative modulator of DNA gyrase MC60_018445 PF01523 Putative modulator of DNA gyrase MC60_018450 PF00258 Flavodoxin MC60_018455 PF02899 Phage integrase, N-terminal SAM-like domain MC60_018455 PF00589 Phage integrase family MC60_018460 PF01741 Large-conductance mechanosensitive channel, MscL MC60_018470 PF17768 RecJ OB domain MC60_018470 PF02272 DHHA1 domain MC60_018470 PF01368 DHH family MC60_018490 PF02508 Rnf-Nqr subunit, membrane protein MC60_018505 PF00665 Integrase core domain MC60_018520 PF00145 C-5 cytosine-specific DNA methylase MC60_018525 PF00183 Hsp90 protein MC60_018545 PF04055 Radical SAM superfamily MC60_018545 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MC60_018550 PF03099 Biotin/lipoate A/B protein ligase family MC60_018555 PF04359 Protein of unknown function (DUF493) MC60_018560 PF07943 Penicillin-binding protein 5, C-terminal domain MC60_018560 PF00768 D-alanyl-D-alanine carboxypeptidase MC60_018565 PF03330 Lytic transglycolase MC60_018565 PF05036 Sporulation related domain MC60_018570 PF13406 Transglycosylase SLT domain MC60_018575 PF01098 Cell cycle protein MC60_018580 PF00905 Penicillin binding protein transpeptidase domain MC60_018580 PF03717 Penicillin-binding Protein dimerisation domain MC60_018585 PF02590 Predicted SPOUT methyltransferase MC60_018595 PF01467 Cytidylyltransferase-like MC60_018610 PF13603 Leucyl-tRNA synthetase, Domain 2 MC60_018610 PF00133 tRNA synthetases class I (I, L, M and V) MC60_018610 PF08264 Anticodon-binding domain of tRNA MC60_018615 PF07295 Zinc-ribbon containing domain MC60_018620 PF00795 Carbon-nitrogen hydrolase MC60_018625 PF00571 CBS domain MC60_018625 PF03471 Transporter associated domain MC60_018630 PF02130 Uncharacterized protein family UPF0054 MC60_018635 PF02562 PhoH-like protein MC60_018640 PF00919 Uncharacterized protein family UPF0004 MC60_018640 PF01938 TRAM domain MC60_018640 PF04055 Radical SAM superfamily MC60_018645 PF01494 FAD binding domain MC60_018650 PF00857 Isochorismatase family MC60_018655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_018655 PF03466 LysR substrate binding domain MC60_018665 PF13419 Haloacid dehalogenase-like hydrolase MC60_018670 PF00990 Diguanylate cyclase, GGDEF domain MC60_018680 PF00990 Diguanylate cyclase, GGDEF domain MC60_018680 PF17152 Periplasmic sensor domain MC60_018690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MC60_018690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MC60_018700 PF14226 non-haem dioxygenase in morphine synthesis N-terminal MC60_018700 PF03171 2OG-Fe(II) oxygenase superfamily MC60_018710 PF00005 ABC transporter MC60_018710 PF09383 NIL domain MC60_018715 PF00528 Binding-protein-dependent transport system inner membrane component MC60_018720 PF09285 Elongation factor P, C-terminal MC60_018720 PF08207 Elongation factor P (EF-P) KOW-like domain MC60_018720 PF01132 Elongation factor P (EF-P) OB domain MC60_018730 PF00478 IMP dehydrogenase / GMP reductase domain MC60_018735 PF18030 RimK PreATP-grasp domain MC60_018735 PF08443 RimK-like ATP-grasp domain MC60_018740 PF00512 His Kinase A (phospho-acceptor) domain MC60_018740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_018740 PF08521 Two-component sensor kinase N-terminal MC60_018745 PF00486 Transcriptional regulatory protein, C terminal MC60_018745 PF00072 Response regulator receiver domain MC60_018755 PF00106 short chain dehydrogenase MC60_018765 PF00501 AMP-binding enzyme MC60_018780 PF06224 Winged helix DNA-binding domain MC60_018795 PF02313 Fumarate reductase subunit D MC60_018800 PF02300 Fumarate reductase subunit C MC60_018805 PF13085 2Fe-2S iron-sulfur cluster binding domain MC60_018805 PF13183 4Fe-4S dicluster domain MC60_018810 PF02910 Fumarate reductase flavoprotein C-term MC60_018810 PF00890 FAD binding domain MC60_018815 PF00672 HAMP domain MC60_018815 PF02743 Cache domain MC60_018815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_018820 PF03009 Glycerophosphoryl diester phosphodiesterase family MC60_018825 PF12794 Mechanosensitive ion channel inner membrane domain 1 MC60_018825 PF12795 Mechanosensitive ion channel porin domain MC60_018825 PF00924 Mechanosensitive ion channel MC60_018835 PF01476 LysM domain MC60_018835 PF01551 Peptidase family M23 MC60_018835 PF08525 Opacity-associated protein A N-terminal motif MC60_018850 PF03466 LysR substrate binding domain MC60_018850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_018865 PF03466 LysR substrate binding domain MC60_018865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_018870 PF17092 Penicillin-binding protein OB-like domain MC60_018870 PF00912 Transglycosylase MC60_018870 PF00905 Penicillin binding protein transpeptidase domain MC60_018895 PF07660 Secretin and TonB N terminus short domain MC60_018895 PF11741 AMIN domain MC60_018895 PF03958 Bacterial type II/III secretion system short domain MC60_018895 PF00263 Bacterial type II and III secretion system protein MC60_018900 PF01202 Shikimate kinase MC60_018905 PF01761 3-dehydroquinate synthase MC60_018910 PF05036 Sporulation related domain MC60_018915 PF02086 D12 class N6 adenine-specific DNA methyltransferase MC60_018920 PF00834 Ribulose-phosphate 3 epimerase family MC60_018925 PF13419 Haloacid dehalogenase-like hydrolase MC60_018930 PF00579 tRNA synthetases class I (W and Y) MC60_018940 PF00117 Glutamine amidotransferase class-I MC60_018945 PF00202 Aminotransferase class-III MC60_018950 PF04958 Arginine N-succinyltransferase beta subunit MC60_018955 PF00171 Aldehyde dehydrogenase family MC60_018970 PF13419 Haloacid dehalogenase-like hydrolase MC60_018975 PF07690 Major Facilitator Superfamily MC60_018985 PF07859 alpha/beta hydrolase fold MC60_018995 PF02080 TrkA-C domain MC60_018995 PF03600 Citrate transporter MC60_019040 PF01926 50S ribosome-binding GTPase MC60_019040 PF06071 Protein of unknown function (DUF933) MC60_019045 PF01195 Peptidyl-tRNA hydrolase MC60_019050 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MC60_019050 PF14572 Phosphoribosyl synthetase-associated domain MC60_019060 PF00288 GHMP kinases N terminal domain MC60_019060 PF08544 GHMP kinases C terminal MC60_019065 PF03550 Outer membrane lipoprotein LolB MC60_019070 PF01488 Shikimate / quinate 5-dehydrogenase MC60_019070 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MC60_019070 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MC60_019075 PF03462 PCRF domain MC60_019075 PF00472 RF-1 domain MC60_019080 PF13847 Methyltransferase domain MC60_019080 PF17827 PrmC N-terminal domain MC60_019090 PF13369 Transglutaminase-like superfamily MC60_019095 PF00793 DAHP synthetase I family MC60_019100 PF00375 Sodium:dicarboxylate symporter family MC60_019105 PF01228 Glycine radical MC60_019110 PF03167 Uracil DNA glycosylase superfamily MC60_019125 PF00923 Transaldolase/Fructose-6-phosphate aldolase MC60_019130 PF01235 Sodium:alanine symporter family MC60_019135 PF00144 Beta-lactamase MC60_019140 PF07690 Major Facilitator Superfamily MC60_019145 PF03466 LysR substrate binding domain MC60_019145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_019150 PF03652 Holliday junction resolvase MC60_019155 PF02622 Uncharacterized ACR, COG1678 MC60_019160 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MC60_019160 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MC60_019165 PF04452 RNA methyltransferase MC60_019170 PF04231 Endonuclease I MC60_019175 PF17283 SprT-like zinc ribbon domain MC60_019175 PF10263 SprT-like family MC60_019180 PF00438 S-adenosylmethionine synthetase, N-terminal domain MC60_019180 PF02773 S-adenosylmethionine synthetase, C-terminal domain MC60_019180 PF02772 S-adenosylmethionine synthetase, central domain MC60_019185 PF02780 Transketolase, C-terminal domain MC60_019185 PF00456 Transketolase, thiamine diphosphate binding domain MC60_019185 PF02779 Transketolase, pyrimidine binding domain MC60_019195 PF01042 Endoribonuclease L-PSP MC60_019210 PF03702 Anhydro-N-acetylmuramic acid kinase MC60_019215 PF08525 Opacity-associated protein A N-terminal motif MC60_019215 PF01476 LysM domain MC60_019215 PF01551 Peptidase family M23 MC60_019220 PF00579 tRNA synthetases class I (W and Y) MC60_019225 PF01204 Trehalase MC60_019235 PF01161 Phosphatidylethanolamine-binding protein MC60_019245 PF03466 LysR substrate binding domain MC60_019245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_019255 PF00155 Aminotransferase class I and II MC60_019260 PF07690 Major Facilitator Superfamily MC60_019265 PF03466 LysR substrate binding domain MC60_019265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_019270 PF00106 short chain dehydrogenase MC60_019275 PF08496 Peptidase family S49 N-terminal MC60_019275 PF01343 Peptidase family S49 MC60_019280 PF04996 Succinylarginine dihydrolase MC60_019285 PF08272 Topoisomerase I zinc-ribbon-like MC60_019285 PF01131 DNA topoisomerase MC60_019285 PF01751 Toprim domain MC60_019285 PF01396 Topoisomerase DNA binding C4 zinc finger MC60_019295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_019295 PF08447 PAS fold MC60_019300 PF00728 Glycosyl hydrolase family 20, catalytic domain MC60_019300 PF02838 Glycosyl hydrolase family 20, domain 2 MC60_019305 PF01869 BadF/BadG/BcrA/BcrD ATPase family MC60_019315 PF00005 ABC transporter MC60_019315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC60_019320 PF00005 ABC transporter MC60_019320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC60_019325 PF12911 N-terminal TM domain of oligopeptide transport permease C MC60_019325 PF00528 Binding-protein-dependent transport system inner membrane component MC60_019330 PF00528 Binding-protein-dependent transport system inner membrane component MC60_019335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC60_019340 PF00919 Uncharacterized protein family UPF0004 MC60_019340 PF04055 Radical SAM superfamily MC60_019340 PF18693 TRAM domain MC60_019345 PF00072 Response regulator receiver domain MC60_019350 PF01022 Bacterial regulatory protein, arsR family MC60_019355 PF01758 Sodium Bile acid symporter family MC60_019360 PF03960 ArsC family MC60_019375 PF02049 Flagellar hook-basal body complex protein FliE MC60_019380 PF01514 Secretory protein of YscJ/FliF family MC60_019380 PF08345 Flagellar M-ring protein C-terminal MC60_019385 PF14842 FliG N-terminal domain MC60_019385 PF14841 FliG middle domain MC60_019385 PF01706 FliG C-terminal domain MC60_019395 PF18269 T3SS EscN ATPase C-terminal domain MC60_019395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MC60_019415 PF02154 Flagellar motor switch protein FliM MC60_019415 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MC60_019420 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MC60_019425 PF04347 Flagellar biosynthesis protein, FliO MC60_019430 PF00813 FliP family MC60_019435 PF01313 Bacterial export proteins, family 3 MC60_019440 PF01311 Bacterial export proteins, family 1 MC60_019445 PF01312 FlhB HrpN YscU SpaS Family MC60_019450 PF00771 FHIPEP family MC60_019455 PF00448 SRP54-type protein, GTPase domain MC60_019460 PF10609 NUBPL iron-transfer P-loop NTPase MC60_019465 PF04542 Sigma-70 region 2 MC60_019465 PF04539 Sigma-70 region 3 MC60_019465 PF04545 Sigma-70, region 4 MC60_019470 PF00072 Response regulator receiver domain MC60_019475 PF04344 Chemotaxis phosphatase, CheZ MC60_019480 PF07194 P2 response regulator binding domain MC60_019480 PF01627 Hpt domain MC60_019480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_019480 PF02895 Signal transducing histidine kinase, homodimeric domain MC60_019480 PF01584 CheW-like domain MC60_019485 PF00072 Response regulator receiver domain MC60_019485 PF01339 CheB methylesterase MC60_019490 PF01618 MotA/TolQ/ExbB proton channel family MC60_019495 PF13677 Membrane MotB of proton-channel complex MotA/MotB MC60_019495 PF00691 OmpA family MC60_019500 PF13614 AAA domain MC60_019510 PF01584 CheW-like domain MC60_019520 PF00005 ABC transporter MC60_019525 PF03379 CcmB protein MC60_019530 PF01578 Cytochrome C assembly protein MC60_019535 PF04995 Heme exporter protein D (CcmD) MC60_019540 PF03100 CcmE MC60_019545 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MC60_019545 PF01578 Cytochrome C assembly protein MC60_019550 PF08534 Redoxin MC60_019555 PF03918 Cytochrome C biogenesis protein MC60_019565 PF04333 MlaA lipoprotein MC60_019570 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MC60_019570 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MC60_019575 PF00462 Glutaredoxin MC60_019580 PF01029 NusB family MC60_019580 PF01189 16S rRNA methyltransferase RsmB/F MC60_019595 PF01243 Pyridoxamine 5'-phosphate oxidase MC60_019595 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MC60_019600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_019600 PF03466 LysR substrate binding domain MC60_019605 PF01546 Peptidase family M20/M25/M40 MC60_019625 PF13508 Acetyltransferase (GNAT) domain MC60_019645 PF01668 SmpB protein MC60_019650 PF03364 Polyketide cyclase / dehydrase and lipid transport MC60_019660 PF13460 NAD(P)H-binding MC60_019665 PF04355 SmpA / OmlA family MC60_019670 PF00465 Iron-containing alcohol dehydrogenase MC60_019675 PF01048 Phosphorylase superfamily MC60_019680 PF00849 RNA pseudouridylate synthase MC60_019685 PF01156 Inosine-uridine preferring nucleoside hydrolase MC60_019700 PF07509 Protein of unknown function (DUF1523) MC60_019705 PF00672 HAMP domain MC60_019705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_019710 PF01810 LysE type translocator MC60_019720 PF02080 TrkA-C domain MC60_019720 PF00999 Sodium/hydrogen exchanger family MC60_019720 PF03471 Transporter associated domain MC60_019730 PF02557 D-alanyl-D-alanine carboxypeptidase MC60_019735 PF07687 Peptidase dimerisation domain MC60_019735 PF01546 Peptidase family M20/M25/M40 MC60_019740 PF03960 ArsC family MC60_019750 PF03606 C4-dicarboxylate anaerobic carrier MC60_019755 PF01546 Peptidase family M20/M25/M40 MC60_019755 PF07687 Peptidase dimerisation domain MC60_019765 PF03605 Anaerobic c4-dicarboxylate membrane transporter MC60_019770 PF01336 OB-fold nucleic acid binding domain MC60_019770 PF00152 tRNA synthetases class II (D, K and N) MC60_019790 PF06968 Biotin and Thiamin Synthesis associated domain MC60_019790 PF04055 Radical SAM superfamily MC60_019795 PF00155 Aminotransferase class I and II MC60_019800 PF08241 Methyltransferase domain MC60_019800 PF12697 Alpha/beta hydrolase family MC60_019810 PF01435 Peptidase family M48 MC60_019815 PF03473 MOSC domain MC60_019815 PF00111 2Fe-2S iron-sulfur cluster binding domain MC60_019815 PF03476 MOSC N-terminal beta barrel domain MC60_019815 PF03476 MOSC N-terminal beta barrel domain MC60_019815 PF03473 MOSC domain MC60_019815 PF00111 2Fe-2S iron-sulfur cluster binding domain MC60_019820 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC60_019820 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MC60_019820 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MC60_019825 PF10371 Domain of unknown function MC60_019825 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MC60_019825 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MC60_019825 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MC60_019825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MC60_019830 PF04325 Protein of unknown function (DUF465) MC60_019840 PF01554 MatE MC60_019860 PF00291 Pyridoxal-phosphate dependent enzyme MC60_019865 PF00465 Iron-containing alcohol dehydrogenase MC60_019875 PF00440 Bacterial regulatory proteins, tetR family MC60_019875 PF08359 YsiA-like protein, C-terminal region MC60_019880 PF00171 Aldehyde dehydrogenase family MC60_019890 PF00877 NlpC/P60 family MC60_019895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_019895 PF03466 LysR substrate binding domain MC60_019915 PF08003 Protein of unknown function (DUF1698) MC60_019920 PF13649 Methyltransferase domain MC60_019925 PF01904 Protein of unknown function DUF72 MC60_019935 PF02938 GAD domain MC60_019935 PF00152 tRNA synthetases class II (D, K and N) MC60_019935 PF01336 OB-fold nucleic acid binding domain MC60_019940 PF01709 Transcriptional regulator MC60_019945 PF08019 Phosphoethanolamine transferase EptA/EptB MC60_019945 PF00884 Sulfatase MC60_019950 PF00480 ROK family MC60_019950 PF01047 MarR family MC60_019955 PF01979 Amidohydrolase family MC60_019960 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MC60_019965 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MC60_019965 PF00367 phosphotransferase system, EIIB MC60_019965 PF02378 Phosphotransferase system, EIIC MC60_019970 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain MC60_019970 PF03173 Putative carbohydrate binding domain MC60_019970 PF00728 Glycosyl hydrolase family 20, catalytic domain MC60_019970 PF02838 Glycosyl hydrolase family 20, domain 2 MC60_019975 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MC60_019975 PF00749 tRNA synthetases class I (E and Q), catalytic domain MC60_019980 PF01475 Ferric uptake regulator family MC60_019990 PF00258 Flavodoxin MC60_019995 PF01402 Ribbon-helix-helix protein, copG family MC60_020005 PF12697 Alpha/beta hydrolase family MC60_020010 PF17206 SeqA protein N-terminal domain MC60_020010 PF03925 SeqA protein C-terminal domain MC60_020015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MC60_020015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MC60_020015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MC60_020015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MC60_020025 PF01047 MarR family MC60_020030 PF13406 Transglycosylase SLT domain MC60_020035 PF01066 CDP-alcohol phosphatidyltransferase MC60_020040 PF00005 ABC transporter MC60_020050 PF13416 Bacterial extracellular solute-binding protein MC60_020055 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC60_020055 PF00403 Heavy-metal-associated domain MC60_020055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MC60_020060 PF02627 Carboxymuconolactone decarboxylase family MC60_020080 PF01103 Surface antigen MC60_020080 PF07244 Surface antigen variable number repeat MC60_020080 PF17243 POTRA domain TamA domain 1 MC60_020085 PF04357 TamB, inner membrane protein subunit of TAM complex MC60_020105 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MC60_020110 PF03707 Bacterial signalling protein N terminal repeat MC60_020110 PF00563 EAL domain MC60_020110 PF00990 Diguanylate cyclase, GGDEF domain MC60_020115 PF14718 Soluble lytic murein transglycosylase L domain MC60_020115 PF01464 Transglycosylase SLT domain MC60_020120 PF00356 Bacterial regulatory proteins, lacI family MC60_020130 PF03061 Thioesterase superfamily MC60_020140 PF03372 Endonuclease/Exonuclease/phosphatase family MC60_020145 PF01476 LysM domain MC60_020145 PF01464 Transglycosylase SLT domain MC60_020150 PF00753 Metallo-beta-lactamase superfamily MC60_020150 PF16123 Hydroxyacylglutathione hydrolase C-terminus MC60_020155 PF08241 Methyltransferase domain MC60_020160 PF00075 RNase H MC60_020165 PF00929 Exonuclease MC60_020175 PF11849 Domain of unknown function (DUF3369) MC60_020180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MC60_020180 PF02770 Acyl-CoA dehydrogenase, middle domain MC60_020180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MC60_020180 PF09317 Domain of unknown function (DUF1974) MC60_020185 PF13580 SIS domain MC60_020190 PF13230 Glutamine amidotransferases class-II MC60_020200 PF01933 Uncharacterised protein family UPF0052 MC60_020210 PF09456 RcsC Alpha-Beta-Loop (ABL) MC60_020210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_020210 PF00072 Response regulator receiver domain MC60_020210 PF00512 His Kinase A (phospho-acceptor) domain MC60_020225 PF00196 Bacterial regulatory proteins, luxR family MC60_020225 PF00072 Response regulator receiver domain MC60_020230 PF00672 HAMP domain MC60_020230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC60_020230 PF07730 Histidine kinase MC60_020230 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term MC60_020235 PF06463 Molybdenum Cofactor Synthesis C MC60_020235 PF04055 Radical SAM superfamily MC60_020240 PF12800 4Fe-4S binding domain MC60_020240 PF13187 4Fe-4S dicluster domain MC60_020240 PF00037 4Fe-4S binding domain MC60_020250 PF00384 Molybdopterin oxidoreductase MC60_020250 PF01568 Molydopterin dinucleotide binding domain MC60_020250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MC60_020250 PF10518 TAT (twin-arginine translocation) pathway signal sequence MC60_020255 PF12800 4Fe-4S binding domain MC60_020255 PF12838 4Fe-4S dicluster domain MC60_020260 PF13237 4Fe-4S dicluster domain MC60_020260 PF12801 4Fe-4S binding domain MC60_020265 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) MC60_020270 PF03264 NapC/NirT cytochrome c family, N-terminal region MC60_020275 PF00994 Probable molybdopterin binding domain MC60_020280 PF01967 MoaC family MC60_020285 PF02597 ThiS family MC60_020290 PF02391 MoaE protein MC60_020300 PF00528 Binding-protein-dependent transport system inner membrane component MC60_020305 PF03459 TOBE domain MC60_020305 PF00005 ABC transporter MC60_020310 PF12697 Alpha/beta hydrolase family MC60_020315 PF06406 StbA protein MC60_020325 PF00899 ThiF family MC60_020330 PF03453 MoeA N-terminal region (domain I and II) MC60_020330 PF03454 MoeA C-terminal region (domain IV) MC60_020330 PF00994 Probable molybdopterin binding domain MC60_020335 PF01227 GTP cyclohydrolase I MC60_020340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC60_020340 PF00672 HAMP domain MC60_020340 PF17200 Single Cache domain 2 MC60_020355 PF03466 LysR substrate binding domain MC60_020355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_020360 PF04264 YceI-like domain MC60_020385 PF01546 Peptidase family M20/M25/M40 MC60_020385 PF07687 Peptidase dimerisation domain MC60_020395 PF17944 Arginine decarboxylase C-terminal helical extension MC60_020395 PF17810 Arginine decarboxylase helical bundle domain MC60_020395 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MC60_020410 PF03707 Bacterial signalling protein N terminal repeat MC60_020410 PF00563 EAL domain MC60_020410 PF00990 Diguanylate cyclase, GGDEF domain MC60_020415 PF00300 Histidine phosphatase superfamily (branch 1) MC60_020425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC60_020435 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MC60_020435 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MC60_020440 PF01479 S4 domain MC60_020440 PF00849 RNA pseudouridylate synthase MC60_020445 PF07690 Major Facilitator Superfamily MC60_020455 PF03466 LysR substrate binding domain MC60_020455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_020465 PF10689 Protein of unknown function (DUF2496) MC60_020475 PF04391 Protein of unknown function (DUF533) MC60_020485 PF00155 Aminotransferase class I and II MC60_020485 PF00392 Bacterial regulatory proteins, gntR family MC60_020490 PF01654 Cytochrome bd terminal oxidase subunit I MC60_020495 PF02322 Cytochrome bd terminal oxidase subunit II MC60_020505 PF07690 Major Facilitator Superfamily MC60_020515 PF00248 Aldo/keto reductase family MC60_020535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_020535 PF03466 LysR substrate binding domain MC60_020540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MC60_020540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MC60_020545 PF00230 Major intrinsic protein MC60_020550 PF07690 Major Facilitator Superfamily MC60_020555 PF08220 DeoR-like helix-turn-helix domain MC60_020555 PF00455 DeoR C terminal sensor domain MC60_020565 PF16901 C-terminal domain of alpha-glycerophosphate oxidase MC60_020565 PF01266 FAD dependent oxidoreductase MC60_020570 PF03009 Glycerophosphoryl diester phosphodiesterase family MC60_020575 PF00793 DAHP synthetase I family MC60_020580 PF01817 Chorismate mutase type II MC60_020580 PF02153 Prephenate dehydrogenase MC60_020585 PF03466 LysR substrate binding domain MC60_020585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC60_020590 PF04219 Protein of unknown function, DUF MC60_020595 PF03974 Ecotin MC60_020615 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MC60_020615 PF00326 Prolyl oligopeptidase family MC60_020620 PF07715 TonB-dependent Receptor Plug Domain MC60_020620 PF00593 TonB dependent receptor MC60_020625 PF11893 Domain of unknown function (DUF3413) MC60_020625 PF00884 Sulfatase MC60_020630 PF07208 Protein of unknown function (DUF1414) MC60_020635 PF04245 37-kD nucleoid-associated bacterial protein MC60_020640 PF01547 Bacterial extracellular solute-binding protein MC60_020645 PF00528 Binding-protein-dependent transport system inner membrane component MC60_020645 PF14785 Maltose transport system permease protein MalF P2 domain MC60_020650 PF00528 Binding-protein-dependent transport system inner membrane component MC60_020655 PF00005 ABC transporter MC60_020655 PF08402 TOBE domain MC60_020660 PF03976 Polyphosphate kinase 2 (PPK2) MC60_020665 PF00561 alpha/beta hydrolase fold MC60_020675 PF01594 AI-2E family transporter MC60_020680 PF01206 Sulfurtransferase TusA MC60_020685 PF01435 Peptidase family M48 MC60_020685 PF13181 Tetratricopeptide repeat MC60_020690 PF00578 AhpC/TSA family MC60_020695 PF03960 ArsC family MC60_020710 PF04336 Acyl carrier protein phosphodiesterase MC60_020720 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC60_020725 PF01979 Amidohydrolase family MC60_020730 PF03956 Lysine exporter LysO MC60_020735 PF00005 ABC transporter MC60_020740 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC60_020745 PF00528 Binding-protein-dependent transport system inner membrane component MC60_020750 PF00528 Binding-protein-dependent transport system inner membrane component MC60_020760 PF04055 Radical SAM superfamily MC60_020765 PF03707 Bacterial signalling protein N terminal repeat MC60_020765 PF00990 Diguanylate cyclase, GGDEF domain MC60_020765 PF00563 EAL domain MC60_020770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MC60_020770 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC60_020785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MC60_020785 PF00529 HlyD membrane-fusion protein of T1SS MC60_020790 PF02321 Outer membrane efflux protein MC60_020795 PF01594 AI-2E family transporter