locus-tag class description LCG53_00005 PF00308 Bacterial dnaA protein LCG53_00005 PF08299 Bacterial dnaA protein helix-turn-helix LCG53_00005 PF11638 DnaA N-terminal domain LCG53_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LCG53_00010 PF02767 DNA polymerase III beta subunit, central domain LCG53_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LCG53_00015 PF02463 RecF/RecN/SMC N terminal domain LCG53_00020 PF01751 Toprim domain LCG53_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_00020 PF18053 DNA gyrase B subunit insert domain LCG53_00020 PF00986 DNA gyrase B subunit, carboxyl terminus LCG53_00020 PF00204 DNA gyrase B LCG53_00025 PF02311 AraC-like ligand binding domain LCG53_00025 PF12833 Helix-turn-helix domain LCG53_00030 PF12706 Beta-lactamase superfamily domain LCG53_00035 PF00011 Hsp20/alpha crystallin family LCG53_00040 PF00011 Hsp20/alpha crystallin family LCG53_00045 PF00155 Aminotransferase class I and II LCG53_00060 PF07690 Major Facilitator Superfamily LCG53_00065 PF00486 Transcriptional regulatory protein, C terminal LCG53_00065 PF00072 Response regulator receiver domain LCG53_00070 PF13493 Domain of unknown function (DUF4118) LCG53_00070 PF13492 GAF domain LCG53_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_00070 PF00512 His Kinase A (phospho-acceptor) domain LCG53_00070 PF02702 Osmosensitive K+ channel His kinase sensor domain LCG53_00075 PF02669 K+-transporting ATPase, c chain LCG53_00085 PF03814 Potassium-transporting ATPase A subunit LCG53_00105 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCG53_00105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCG53_00110 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCG53_00110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_00110 PF00512 His Kinase A (phospho-acceptor) domain LCG53_00115 PF00873 AcrB/AcrD/AcrF family LCG53_00120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCG53_00125 PF00440 Bacterial regulatory proteins, tetR family LCG53_00160 PF12146 Serine aminopeptidase, S33 LCG53_00165 PF12105 SpoU, rRNA methylase, C-terminal LCG53_00165 PF00588 SpoU rRNA Methylase family LCG53_00170 PF02824 TGS domain LCG53_00170 PF04607 Region found in RelA / SpoT proteins LCG53_00170 PF13291 ACT domain LCG53_00175 PF01192 RNA polymerase Rpb6 LCG53_00180 PF00625 Guanylate kinase LCG53_00185 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LCG53_00200 PF00892 EamA-like transporter family LCG53_00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_00220 PF03466 LysR substrate binding domain LCG53_00225 PF00579 tRNA synthetases class I (W and Y) LCG53_00230 PF00582 Universal stress protein family LCG53_00235 PF07055 Enoyl reductase FAD binding domain LCG53_00235 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LCG53_00235 PF12241 Trans-2-enoyl-CoA reductase catalytic region LCG53_00240 PF05230 MASE2 domain LCG53_00240 PF00990 Diguanylate cyclase, GGDEF domain LCG53_00245 PF00210 Ferritin-like domain LCG53_00255 PF07690 Major Facilitator Superfamily LCG53_00260 PF01810 LysE type translocator LCG53_00275 PF16967 E-set like domain LCG53_00275 PF15976 CS1-pili formation C-terminal LCG53_00280 PF18649 EcpB C-terminal domain LCG53_00285 PF16449 Fimbrillin MatB LCG53_00290 PF00196 Bacterial regulatory proteins, luxR family LCG53_00290 PF00072 Response regulator receiver domain LCG53_00295 PF00512 His Kinase A (phospho-acceptor) domain LCG53_00295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_00295 PF01627 Hpt domain LCG53_00295 PF00989 PAS fold LCG53_00295 PF00072 Response regulator receiver domain LCG53_00295 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCG53_00305 PF06580 Histidine kinase LCG53_00305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_00305 PF07694 5TMR of 5TMR-LYT LCG53_00310 PF00072 Response regulator receiver domain LCG53_00310 PF04397 LytTr DNA-binding domain LCG53_00315 PF07690 Major Facilitator Superfamily LCG53_00320 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LCG53_00320 PF02222 ATP-grasp domain LCG53_00325 PF00731 AIR carboxylase LCG53_00330 PF00593 TonB dependent receptor LCG53_00330 PF07715 TonB-dependent Receptor Plug Domain LCG53_00335 PF01177 Asp/Glu/Hydantoin racemase LCG53_00370 PF00899 ThiF family LCG53_00375 PF02657 Fe-S metabolism associated domain LCG53_00380 PF00266 Aminotransferase class-V LCG53_00385 PF00580 UvrD/REP helicase N-terminal domain LCG53_00385 PF13361 UvrD-like helicase C-terminal domain LCG53_00390 PF00563 EAL domain LCG53_00390 PF00990 Diguanylate cyclase, GGDEF domain LCG53_00390 PF03707 Bacterial signalling protein N terminal repeat LCG53_00395 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LCG53_00400 PF08240 Alcohol dehydrogenase GroES-like domain LCG53_00400 PF00107 Zinc-binding dehydrogenase LCG53_00405 PF00155 Aminotransferase class I and II LCG53_00410 PF00440 Bacterial regulatory proteins, tetR family LCG53_00410 PF08360 QacR-like protein, C-terminal region LCG53_00415 PF01370 NAD dependent epimerase/dehydratase family LCG53_00430 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) LCG53_00445 PF03611 PTS system sugar-specific permease component LCG53_00455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCG53_00460 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LCG53_00460 PF00356 Bacterial regulatory proteins, lacI family LCG53_00475 PF03748 Flagellar basal body-associated protein FliL LCG53_00480 PF04345 Chorismate lyase LCG53_00485 PF01040 UbiA prenyltransferase family LCG53_00490 PF01553 Acyltransferase LCG53_00495 PF00717 Peptidase S24-like LCG53_00495 PF01726 LexA DNA binding domain LCG53_00505 PF02630 SCO1/SenC LCG53_00510 PF01554 MatE LCG53_00515 PF00588 SpoU rRNA Methylase family LCG53_00520 PF16527 Two-component sensor protein CpxA, periplasmic domain LCG53_00520 PF00672 HAMP domain LCG53_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_00520 PF00512 His Kinase A (phospho-acceptor) domain LCG53_00525 PF00072 Response regulator receiver domain LCG53_00525 PF00486 Transcriptional regulatory protein, C terminal LCG53_00530 PF16916 Dimerisation domain of Zinc Transporter LCG53_00530 PF01545 Cation efflux family LCG53_00535 PF00132 Bacterial transferase hexapeptide (six repeats) LCG53_00535 PF06426 Serine acetyltransferase, N-terminal LCG53_00545 PF06005 Cell division protein ZapB LCG53_00555 PF01612 3'-5' exonuclease LCG53_00555 PF00476 DNA polymerase family A LCG53_00555 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LCG53_00555 PF01367 5'-3' exonuclease, C-terminal SAM fold LCG53_00560 PF00132 Bacterial transferase hexapeptide (six repeats) LCG53_00600 PF00356 Bacterial regulatory proteins, lacI family LCG53_00605 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LCG53_00605 PF00703 Glycosyl hydrolases family 2 LCG53_00605 PF16353 Domain of unknown function(DUF4981) LCG53_00605 PF02929 Beta galactosidase small chain LCG53_00605 PF02837 Glycosyl hydrolases family 2, sugar binding domain LCG53_00610 PF04074 YhcH/YjgK/YiaL LCG53_00615 PF13520 Amino acid permease LCG53_00620 PF01588 Putative tRNA binding domain LCG53_00625 PF13520 Amino acid permease LCG53_00630 PF13593 SBF-like CPA transporter family (DUF4137) LCG53_00635 PF12867 DinB superfamily LCG53_00635 PF03781 Sulfatase-modifying factor enzyme 1 LCG53_00650 PF00756 Putative esterase LCG53_00655 PF08240 Alcohol dehydrogenase GroES-like domain LCG53_00655 PF00107 Zinc-binding dehydrogenase LCG53_00660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_00660 PF03466 LysR substrate binding domain LCG53_00665 PF02653 Branched-chain amino acid transport system / permease component LCG53_00670 PF02653 Branched-chain amino acid transport system / permease component LCG53_00675 PF00005 ABC transporter LCG53_00680 PF02608 ABC transporter substrate-binding protein PnrA-like LCG53_00685 PF13361 UvrD-like helicase C-terminal domain LCG53_00685 PF00580 UvrD/REP helicase N-terminal domain LCG53_00700 PF03466 LysR substrate binding domain LCG53_00700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_00715 PF14001 YdfZ protein LCG53_00735 PF03466 LysR substrate binding domain LCG53_00735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_00740 PF01810 LysE type translocator LCG53_00745 PF06206 CpeT/CpcT family (DUF1001) LCG53_00750 PF01810 LysE type translocator LCG53_00755 PF12833 Helix-turn-helix domain LCG53_00760 PF00892 EamA-like transporter family LCG53_00770 PF00171 Aldehyde dehydrogenase family LCG53_00775 PF01381 Helix-turn-helix LCG53_00775 PF07883 Cupin domain LCG53_00780 PF00202 Aminotransferase class-III LCG53_00785 PF00171 Aldehyde dehydrogenase family LCG53_00790 PF00117 Glutamine amidotransferase class-I LCG53_00790 PF00958 GMP synthase C terminal domain LCG53_00790 PF02540 NAD synthase LCG53_00795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_00795 PF03466 LysR substrate binding domain LCG53_00800 PF00294 pfkB family carbohydrate kinase LCG53_00805 PF02082 Transcriptional regulator LCG53_00820 PF02646 RmuC family LCG53_00825 PF02386 Cation transport protein LCG53_00830 PF02080 TrkA-C domain LCG53_00830 PF02254 TrkA-N domain LCG53_00835 PF01189 16S rRNA methyltransferase RsmB/F LCG53_00835 PF01029 NusB family LCG53_00840 PF02911 Formyl transferase, C-terminal domain LCG53_00840 PF00551 Formyl transferase LCG53_00845 PF01327 Polypeptide deformylase LCG53_00855 PF02481 DNA recombination-mediator protein A LCG53_00855 PF17782 DprA winged helix domain LCG53_00860 PF04361 Protein of unknown function (DUF494) LCG53_00865 PF01396 Topoisomerase DNA binding C4 zinc finger LCG53_00870 PF01300 Telomere recombination LCG53_00875 PF01218 Coproporphyrinogen III oxidase LCG53_00880 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LCG53_00880 PF01488 Shikimate / quinate 5-dehydrogenase LCG53_00880 PF08501 Shikimate dehydrogenase substrate binding domain LCG53_00885 PF01926 50S ribosome-binding GTPase LCG53_00890 PF00034 Cytochrome c LCG53_00895 PF04220 Der GTPase activator (YihI) LCG53_00900 PF10675 Protein of unknown function (DUF2489) LCG53_00905 PF06969 HemN C-terminal domain LCG53_00905 PF04055 Radical SAM superfamily LCG53_00910 PF00962 Adenosine/AMP deaminase LCG53_00915 PF02954 Bacterial regulatory protein, Fis family LCG53_00915 PF00158 Sigma-54 interaction domain LCG53_00915 PF00072 Response regulator receiver domain LCG53_00920 PF00512 His Kinase A (phospho-acceptor) domain LCG53_00920 PF00989 PAS fold LCG53_00920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_00930 PF03951 Glutamine synthetase, beta-Grasp domain LCG53_00930 PF00120 Glutamine synthetase, catalytic domain LCG53_00935 PF00009 Elongation factor Tu GTP binding domain LCG53_00935 PF03144 Elongation factor Tu domain 2 LCG53_00935 PF00679 Elongation factor G C-terminus LCG53_00940 PF03631 Virulence factor BrkB LCG53_00945 PF02580 D-Tyr-tRNA(Tyr) deacylase LCG53_00955 PF00583 Acetyltransferase (GNAT) family LCG53_00955 PF09500 Putative thioesterase (yiiD_Cterm) LCG53_00965 PF17191 RecG wedge domain LCG53_00965 PF00270 DEAD/DEAH box helicase LCG53_00965 PF00271 Helicase conserved C-terminal domain LCG53_00970 PF13091 PLD-like domain LCG53_00975 PF02447 GntP family permease LCG53_00980 PF01202 Shikimate kinase LCG53_00985 PF00920 Dehydratase family LCG53_00990 PF01081 KDPG and KHG aldolase LCG53_01005 PF00356 Bacterial regulatory proteins, lacI family LCG53_01005 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LCG53_01015 PF01551 Peptidase family M23 LCG53_01020 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LCG53_01020 PF01676 Metalloenzyme superfamily LCG53_01025 PF00581 Rhodanese-like domain LCG53_01030 PF02556 Preprotein translocase subunit SecB LCG53_01035 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LCG53_01035 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LCG53_01040 PF01521 Iron-sulphur cluster biosynthesis LCG53_01040 PF01106 NifU-like domain LCG53_01045 PF00156 Phosphoribosyl transferase domain LCG53_01050 PF00561 alpha/beta hydrolase fold LCG53_01065 PF17674 HHH domain LCG53_01065 PF00575 S1 RNA binding domain LCG53_01065 PF09371 Tex-like protein N-terminal domain LCG53_01065 PF16921 Tex protein YqgF-like domain LCG53_01070 PF01272 Transcription elongation factor, GreA/GreB, C-term LCG53_01070 PF03449 Transcription elongation factor, N-terminal LCG53_01075 PF00072 Response regulator receiver domain LCG53_01075 PF00486 Transcriptional regulatory protein, C terminal LCG53_01080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_01080 PF00512 His Kinase A (phospho-acceptor) domain LCG53_01080 PF00672 HAMP domain LCG53_01090 PF00338 Ribosomal protein S10p/S20e LCG53_01095 PF00297 Ribosomal protein L3 LCG53_01100 PF00573 Ribosomal protein L4/L1 family LCG53_01105 PF00276 Ribosomal protein L23 LCG53_01110 PF00181 Ribosomal Proteins L2, RNA binding domain LCG53_01110 PF03947 Ribosomal Proteins L2, C-terminal domain LCG53_01115 PF00203 Ribosomal protein S19 LCG53_01120 PF00237 Ribosomal protein L22p/L17e LCG53_01125 PF07650 KH domain LCG53_01125 PF00189 Ribosomal protein S3, C-terminal domain LCG53_01130 PF00252 Ribosomal protein L16p/L10e LCG53_01135 PF00831 Ribosomal L29 protein LCG53_01140 PF00366 Ribosomal protein S17 LCG53_01145 PF00238 Ribosomal protein L14p/L23e LCG53_01150 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LCG53_01150 PF00467 KOW motif LCG53_01155 PF00281 Ribosomal protein L5 LCG53_01155 PF00673 ribosomal L5P family C-terminus LCG53_01160 PF00253 Ribosomal protein S14p/S29e LCG53_01165 PF00410 Ribosomal protein S8 LCG53_01170 PF00347 Ribosomal protein L6 LCG53_01175 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LCG53_01180 PF00333 Ribosomal protein S5, N-terminal domain LCG53_01180 PF03719 Ribosomal protein S5, C-terminal domain LCG53_01185 PF00327 Ribosomal protein L30p/L7e LCG53_01190 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LCG53_01195 PF00344 SecY translocase LCG53_01200 PF00444 Ribosomal protein L36 LCG53_01205 PF00416 Ribosomal protein S13/S18 LCG53_01210 PF00411 Ribosomal protein S11 LCG53_01215 PF00163 Ribosomal protein S4/S9 N-terminal domain LCG53_01215 PF01479 S4 domain LCG53_01220 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LCG53_01220 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LCG53_01220 PF01000 RNA polymerase Rpb3/RpoA insert domain LCG53_01225 PF01196 Ribosomal protein L17 LCG53_01270 PF00999 Sodium/hydrogen exchanger family LCG53_01270 PF02254 TrkA-N domain LCG53_01275 PF02525 Flavodoxin-like fold LCG53_01280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_01280 PF03466 LysR substrate binding domain LCG53_01285 PF00106 short chain dehydrogenase LCG53_01300 PF00326 Prolyl oligopeptidase family LCG53_01300 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LCG53_01305 PF16868 NMT1-like family LCG53_01320 PF07947 YhhN family LCG53_01325 PF07690 Major Facilitator Superfamily LCG53_01330 PF13533 Biotin-lipoyl like LCG53_01335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_01335 PF03466 LysR substrate binding domain LCG53_01345 PF00375 Sodium:dicarboxylate symporter family LCG53_01350 PF10678 Protein of unknown function (DUF2492) LCG53_01355 PF01914 MarC family integral membrane protein LCG53_01360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_01360 PF03466 LysR substrate binding domain LCG53_01365 PF02416 mttA/Hcf106 family LCG53_01375 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCG53_01375 PF01464 Transglycosylase SLT domain LCG53_01385 PF13091 PLD-like domain LCG53_01395 PF00440 Bacterial regulatory proteins, tetR family LCG53_01400 PF07226 Protein of unknown function (DUF1422) LCG53_01415 PF00448 SRP54-type protein, GTPase domain LCG53_01415 PF02881 SRP54-type protein, helical bundle domain LCG53_01420 PF00005 ABC transporter LCG53_01425 PF18075 FtsX extracellular domain LCG53_01430 PF00140 Sigma-70 factor, region 1.2 LCG53_01430 PF04542 Sigma-70 region 2 LCG53_01430 PF04545 Sigma-70, region 4 LCG53_01435 PF00484 Carbonic anhydrase LCG53_01440 PF00392 Bacterial regulatory proteins, gntR family LCG53_01440 PF07702 UTRA domain LCG53_01445 PF01979 Amidohydrolase family LCG53_01450 PF00491 Arginase family LCG53_01455 PF17391 Urocanase N-terminal domain LCG53_01455 PF17392 Urocanase C-terminal domain LCG53_01455 PF01175 Urocanase Rossmann-like domain LCG53_01460 PF00221 Aromatic amino acid lyase LCG53_01465 PF01699 Sodium/calcium exchanger protein LCG53_01470 PF00563 EAL domain LCG53_01470 PF12792 CSS motif domain associated with EAL LCG53_01505 PF03958 Bacterial type II/III secretion system short domain LCG53_01505 PF00263 Bacterial type II and III secretion system protein LCG53_01520 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LCG53_01520 PF00437 Type II/IV secretion system protein LCG53_01525 PF00482 Type II secretion system (T2SS), protein F LCG53_01540 PF07963 Prokaryotic N-terminal methylation motif LCG53_01540 PF08334 Type II secretion system (T2SS), protein G LCG53_01545 PF00114 Pilin (bacterial filament) LCG53_01545 PF07963 Prokaryotic N-terminal methylation motif LCG53_01575 PF04085 rod shape-determining protein MreC LCG53_01580 PF04093 rod shape-determining protein MreD LCG53_01585 PF02545 Maf-like protein LCG53_01590 PF10150 Ribonuclease E/G family LCG53_01590 PF00575 S1 RNA binding domain LCG53_01595 PF13116 Protein of unknown function LCG53_01595 PF13502 AsmA-like C-terminal region LCG53_01600 PF00795 Carbon-nitrogen hydrolase LCG53_01605 PF01523 Putative modulator of DNA gyrase LCG53_01615 PF01914 MarC family integral membrane protein LCG53_01620 PF07690 Major Facilitator Superfamily LCG53_01630 PF04228 Putative neutral zinc metallopeptidase LCG53_01650 PF00999 Sodium/hydrogen exchanger family LCG53_01655 PF02607 B12 binding domain LCG53_01655 PF02965 Vitamin B12 dependent methionine synthase, activation domain LCG53_01655 PF02574 Homocysteine S-methyltransferase LCG53_01655 PF02310 B12 binding domain LCG53_01655 PF00809 Pterin binding enzyme LCG53_01665 PF08443 RimK-like ATP-grasp domain LCG53_01665 PF18030 RimK PreATP-grasp domain LCG53_01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_01675 PF00072 Response regulator receiver domain LCG53_01675 PF00486 Transcriptional regulatory protein, C terminal LCG53_01690 PF01964 Radical SAM ThiC family LCG53_01690 PF13667 ThiC-associated domain LCG53_01695 PF02581 Thiamine monophosphate synthase LCG53_01700 PF00899 ThiF family LCG53_01710 PF05690 Thiazole biosynthesis protein ThiG LCG53_01715 PF04055 Radical SAM superfamily LCG53_01715 PF06968 Biotin and Thiamin Synthesis associated domain LCG53_01735 PF00132 Bacterial transferase hexapeptide (six repeats) LCG53_01740 PF13036 Peptidoglycan-synthase activator LpoB LCG53_01745 PF00990 Diguanylate cyclase, GGDEF domain LCG53_01750 PF06055 Exopolysaccharide synthesis, ExoD LCG53_01760 PF08803 Putative mono-oxygenase ydhR LCG53_01765 PF01638 HxlR-like helix-turn-helix LCG53_01780 PF07715 TonB-dependent Receptor Plug Domain LCG53_01780 PF00593 TonB dependent receptor LCG53_01790 PF08241 Methyltransferase domain LCG53_01800 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LCG53_01805 PF03692 Putative zinc- or iron-chelating domain LCG53_01810 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LCG53_01815 PF01722 BolA-like protein LCG53_01825 PF05494 MlaC protein LCG53_01830 PF02470 MlaD protein LCG53_01835 PF02405 Permease MlaE LCG53_01840 PF00005 ABC transporter LCG53_01845 PF00571 CBS domain LCG53_01845 PF01380 SIS domain LCG53_01860 PF03968 OstA-like protein LCG53_01865 PF12399 Branched-chain amino acid ATP-binding cassette transporter LCG53_01865 PF00005 ABC transporter LCG53_01870 PF00309 Sigma-54 factor, Activator interacting domain (AID) LCG53_01870 PF04963 Sigma-54 factor, core binding domain LCG53_01870 PF04552 Sigma-54, DNA binding domain LCG53_01875 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LCG53_01880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCG53_01885 PF03668 P-loop ATPase protein family LCG53_01890 PF00381 PTS HPr component phosphorylation site LCG53_01895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCG53_01895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LCG53_01895 PF02378 Phosphotransferase system, EIIC LCG53_01900 PF07071 KDGP aldolase LCG53_01905 PF03841 L-seryl-tRNA selenium transferase LCG53_01910 PF01979 Amidohydrolase family LCG53_01940 PF13180 PDZ domain LCG53_01945 PF00595 PDZ domain LCG53_01945 PF13180 PDZ domain LCG53_01955 PF03969 AFG1-like ATPase LCG53_01960 PF00572 Ribosomal protein L13 LCG53_01965 PF00380 Ribosomal protein S9/S16 LCG53_01970 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LCG53_01970 PF00355 Rieske [2Fe-2S] domain LCG53_01975 PF00033 Cytochrome b/b6/petB LCG53_01975 PF00032 Cytochrome b(C-terminal)/b6/petD LCG53_01980 PF02167 Cytochrome C1 family LCG53_01985 PF02798 Glutathione S-transferase, N-terminal domain LCG53_01985 PF00043 Glutathione S-transferase, C-terminal domain LCG53_01990 PF04386 Stringent starvation protein B LCG53_01995 PF04972 BON domain LCG53_02000 PF13580 SIS domain LCG53_02005 PF02021 Uncharacterised protein family UPF0102 LCG53_02010 PF04348 LppC putative lipoprotein LCG53_02015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCG53_02025 PF02381 MraZ protein, putative antitoxin-like LCG53_02030 PF01795 MraW methylase family LCG53_02035 PF04999 Cell division protein FtsL LCG53_02040 PF03717 Penicillin-binding Protein dimerisation domain LCG53_02040 PF00905 Penicillin binding protein transpeptidase domain LCG53_02045 PF01225 Mur ligase family, catalytic domain LCG53_02045 PF02875 Mur ligase family, glutamate ligase domain LCG53_02045 PF08245 Mur ligase middle domain LCG53_02050 PF01225 Mur ligase family, catalytic domain LCG53_02050 PF02875 Mur ligase family, glutamate ligase domain LCG53_02050 PF08245 Mur ligase middle domain LCG53_02055 PF00953 Glycosyl transferase family 4 LCG53_02055 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LCG53_02060 PF02875 Mur ligase family, glutamate ligase domain LCG53_02060 PF08245 Mur ligase middle domain LCG53_02065 PF01098 Cell cycle protein LCG53_02070 PF04101 Glycosyltransferase family 28 C-terminal domain LCG53_02070 PF03033 Glycosyltransferase family 28 N-terminal domain LCG53_02075 PF02875 Mur ligase family, glutamate ligase domain LCG53_02075 PF01225 Mur ligase family, catalytic domain LCG53_02075 PF08245 Mur ligase middle domain LCG53_02080 PF03799 Cell division protein FtsQ LCG53_02080 PF08478 POTRA domain, FtsQ-type LCG53_02085 PF02491 SHS2 domain inserted in FTSA LCG53_02090 PF12327 FtsZ family, C-terminal domain LCG53_02090 PF00091 Tubulin/FtsZ family, GTPase domain LCG53_02095 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LCG53_02105 PF07516 SecA Wing and Scaffold domain LCG53_02105 PF01043 SecA preprotein cross-linking domain LCG53_02105 PF02810 SEC-C motif LCG53_02105 PF07517 SecA DEAD-like domain LCG53_02115 PF00293 NUDIX domain LCG53_02120 PF03884 DNA gyrase inhibitor YacG LCG53_02125 PF07072 Cell division protein LCG53_02130 PF01121 Dephospho-CoA kinase LCG53_02135 PF06750 Bacterial Peptidase A24 N-terminal domain LCG53_02135 PF01478 Type IV leader peptidase family LCG53_02140 PF00482 Type II secretion system (T2SS), protein F LCG53_02145 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LCG53_02145 PF00437 Type II/IV secretion system protein LCG53_02150 PF07963 Prokaryotic N-terminal methylation motif LCG53_02155 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LCG53_02155 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LCG53_02165 PF01510 N-acetylmuramoyl-L-alanine amidase LCG53_02170 PF07729 FCD domain LCG53_02170 PF00392 Bacterial regulatory proteins, gntR family LCG53_02175 PF17831 Pyruvate dehydrogenase E1 component middle domain LCG53_02175 PF00456 Transketolase, thiamine diphosphate binding domain LCG53_02180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LCG53_02180 PF00364 Biotin-requiring enzyme LCG53_02180 PF02817 e3 binding domain LCG53_02185 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCG53_02185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCG53_02195 PF12729 Four helix bundle sensory module for signal transduction LCG53_02195 PF00672 HAMP domain LCG53_02195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_02200 PF12729 Four helix bundle sensory module for signal transduction LCG53_02200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_02200 PF00672 HAMP domain LCG53_02205 PF01734 Patatin-like phospholipase LCG53_02210 PF00330 Aconitase family (aconitate hydratase) LCG53_02210 PF06434 Aconitate hydratase 2 N-terminus LCG53_02210 PF11791 Aconitate B N-terminal domain LCG53_02215 PF12792 CSS motif domain associated with EAL LCG53_02215 PF00563 EAL domain LCG53_02220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_02220 PF03466 LysR substrate binding domain LCG53_02225 PF01810 LysE type translocator LCG53_02230 PF04030 D-arabinono-1,4-lactone oxidase LCG53_02230 PF01565 FAD binding domain LCG53_02235 PF02492 CobW/HypB/UreG, nucleotide-binding domain LCG53_02235 PF07683 Cobalamin synthesis protein cobW C-terminal domain LCG53_02240 PF07690 Major Facilitator Superfamily LCG53_02250 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LCG53_02255 PF02152 Dihydroneopterin aldolase LCG53_02260 PF02660 Glycerol-3-phosphate acyltransferase LCG53_02305 PF02028 BCCT, betaine/carnitine/choline family transporter LCG53_02310 PF00488 MutS domain V LCG53_02310 PF05190 MutS family domain IV LCG53_02310 PF05192 MutS domain III LCG53_02310 PF05188 MutS domain II LCG53_02310 PF01624 MutS domain I LCG53_02330 PF02384 N-6 DNA Methylase LCG53_02335 PF01420 Type I restriction modification DNA specificity domain LCG53_02340 PF12102 Domain of unknown function (DUF3578) LCG53_02340 PF07728 AAA domain (dynein-related subfamily) LCG53_02340 PF12102 Domain of unknown function (DUF3578) LCG53_02340 PF07728 AAA domain (dynein-related subfamily) LCG53_02350 PF11867 Domain of unknown function (DUF3387) LCG53_02350 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LCG53_02350 PF18766 SWI2/SNF2 ATPase LCG53_02395 PF13538 UvrD-like helicase C-terminal domain LCG53_02410 PF02464 Competence-damaged protein LCG53_02415 PF00154 recA bacterial DNA recombination protein LCG53_02420 PF02631 RecX family LCG53_02425 PF02272 DHHA1 domain LCG53_02425 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LCG53_02425 PF01411 tRNA synthetases class II (A) LCG53_02430 PF00696 Amino acid kinase family LCG53_02430 PF01842 ACT domain LCG53_02430 PF13840 ACT domain LCG53_02435 PF02599 Global regulator protein family LCG53_02470 PF00768 D-alanyl-D-alanine carboxypeptidase LCG53_02475 PF09335 SNARE associated Golgi protein LCG53_02480 PF00571 CBS domain LCG53_02480 PF01595 Cyclin M transmembrane N-terminal domain LCG53_02480 PF03471 Transporter associated domain LCG53_02485 PF00133 tRNA synthetases class I (I, L, M and V) LCG53_02485 PF10458 Valyl tRNA synthetase tRNA binding arm LCG53_02485 PF08264 Anticodon-binding domain of tRNA LCG53_02490 PF04364 DNA polymerase III chi subunit, HolC LCG53_02495 PF02789 Cytosol aminopeptidase family, N-terminal domain LCG53_02495 PF00883 Cytosol aminopeptidase family, catalytic domain LCG53_02500 PF03739 Lipopolysaccharide export system permease LptF/LptG LCG53_02505 PF03739 Lipopolysaccharide export system permease LptF/LptG LCG53_02765 PF01381 Helix-turn-helix LCG53_02765 PF00717 Peptidase S24-like LCG53_02780 PF02899 Phage integrase, N-terminal SAM-like domain LCG53_02780 PF00589 Phage integrase family LCG53_03030 PF01381 Helix-turn-helix LCG53_03030 PF00717 Peptidase S24-like LCG53_03045 PF02899 Phage integrase, N-terminal SAM-like domain LCG53_03045 PF00589 Phage integrase family LCG53_03050 PF00589 Phage integrase family LCG53_03105 PF00909 Ammonium Transporter Family LCG53_03110 PF01938 TRAM domain LCG53_03110 PF05958 tRNA (Uracil-5-)-methyltransferase LCG53_03125 PF07963 Prokaryotic N-terminal methylation motif LCG53_03130 PF01026 TatD related DNase LCG53_03135 PF07670 Nucleoside recognition LCG53_03135 PF01773 Na+ dependent nucleoside transporter N-terminus LCG53_03135 PF07662 Na+ dependent nucleoside transporter C-terminus LCG53_03145 PF01791 DeoC/LacD family aldolase LCG53_03150 PF00591 Glycosyl transferase family, a/b domain LCG53_03150 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LCG53_03150 PF02885 Glycosyl transferase family, helical bundle domain LCG53_03155 PF01676 Metalloenzyme superfamily LCG53_03160 PF01048 Phosphorylase superfamily LCG53_03165 PF00563 EAL domain LCG53_03165 PF05231 MASE1 LCG53_03165 PF08447 PAS fold LCG53_03165 PF08448 PAS fold LCG53_03165 PF13426 PAS domain LCG53_03165 PF00990 Diguanylate cyclase, GGDEF domain LCG53_03175 PF18429 Domain of unknown function (DUF5609) LCG53_03190 PF18073 Rubredoxin metal binding domain LCG53_03195 PF07238 PilZ domain LCG53_03200 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LCG53_03205 PF00216 Bacterial DNA-binding protein LCG53_03220 PF01207 Dihydrouridine synthase (Dus) LCG53_03225 PF01475 Ferric uptake regulator family LCG53_03240 PF05525 Branched-chain amino acid transport protein LCG53_03245 PF05175 Methyltransferase small domain LCG53_03250 PF00270 DEAD/DEAH box helicase LCG53_03250 PF00271 Helicase conserved C-terminal domain LCG53_03255 PF03883 Peroxide stress protein YaaA LCG53_03260 PF00437 Type II/IV secretion system protein LCG53_03265 PF00437 Type II/IV secretion system protein LCG53_03270 PF01168 Alanine racemase, N-terminal domain LCG53_03275 PF03807 NADP oxidoreductase coenzyme F420-dependent LCG53_03275 PF14748 Pyrroline-5-carboxylate reductase dimerisation LCG53_03280 PF02325 YGGT family LCG53_03285 PF02594 Uncharacterised ACR, YggU family COG1872 LCG53_03305 PF06062 Uncharacterised protein family (UPF0231) LCG53_03310 PF17853 GGDEF-like domain LCG53_03310 PF13556 PucR C-terminal helix-turn-helix domain LCG53_03310 PF05651 Putative sugar diacid recognition LCG53_03315 PF02447 GntP family permease LCG53_03320 PF02595 Glycerate kinase family LCG53_03330 PF00255 Glutathione peroxidase LCG53_03335 PF03466 LysR substrate binding domain LCG53_03335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_03340 PF01773 Na+ dependent nucleoside transporter N-terminus LCG53_03340 PF07670 Nucleoside recognition LCG53_03340 PF07662 Na+ dependent nucleoside transporter C-terminus LCG53_03345 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LCG53_03345 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LCG53_03350 PF00472 RF-1 domain LCG53_03355 PF00543 Nitrogen regulatory protein P-II LCG53_03370 PF00005 ABC transporter LCG53_03370 PF08402 TOBE domain LCG53_03375 PF04261 Dyp-type peroxidase family LCG53_03380 PF01316 Arginine repressor, DNA binding domain LCG53_03380 PF02863 Arginine repressor, C-terminal domain LCG53_03385 PF00005 ABC transporter LCG53_03390 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCG53_03395 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_03400 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_03405 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LCG53_03405 PF00056 lactate/malate dehydrogenase, NAD binding domain LCG53_03410 PF08238 Sel1 repeat LCG53_03415 PF00175 Oxidoreductase NAD-binding domain LCG53_03415 PF00970 Oxidoreductase FAD-binding domain LCG53_03415 PF00042 Globin LCG53_03420 PF02082 Transcriptional regulator LCG53_03425 PF03471 Transporter associated domain LCG53_03425 PF01595 Cyclin M transmembrane N-terminal domain LCG53_03425 PF00571 CBS domain LCG53_03430 PF01578 Cytochrome C assembly protein LCG53_03435 PF00448 SRP54-type protein, GTPase domain LCG53_03435 PF02881 SRP54-type protein, helical bundle domain LCG53_03435 PF02978 Signal peptide binding domain LCG53_03440 PF00886 Ribosomal protein S16 LCG53_03445 PF01782 RimM N-terminal domain LCG53_03445 PF05239 PRC-barrel domain LCG53_03450 PF01746 tRNA (Guanine-1)-methyltransferase LCG53_03455 PF01245 Ribosomal protein L19 LCG53_03465 PF02976 DNA mismatch repair enzyme MutH LCG53_03470 PF00293 NUDIX domain LCG53_03475 PF01590 GAF domain LCG53_03475 PF05524 PEP-utilising enzyme, N-terminal LCG53_03475 PF00391 PEP-utilising enzyme, mobile domain LCG53_03475 PF02896 PEP-utilising enzyme, TIM barrel domain LCG53_03480 PF01790 Prolipoprotein diacylglyceryl transferase LCG53_03485 PF00303 Thymidylate synthase LCG53_03490 PF06965 Na+/H+ antiporter 1 LCG53_03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_03500 PF03466 LysR substrate binding domain LCG53_03505 PF01022 Bacterial regulatory protein, arsR family LCG53_03510 PF01649 Ribosomal protein S20 LCG53_03515 PF03023 Lipid II flippase MurJ LCG53_03520 PF01687 Riboflavin kinase LCG53_03520 PF06574 FAD synthetase LCG53_03525 PF08264 Anticodon-binding domain of tRNA LCG53_03525 PF00133 tRNA synthetases class I (I, L, M and V) LCG53_03525 PF06827 Zinc finger found in FPG and IleRS LCG53_03530 PF01252 Signal peptidase (SPase) II LCG53_03535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCG53_03540 PF02401 LytB protein LCG53_03545 PF07963 Prokaryotic N-terminal methylation motif LCG53_03545 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor LCG53_03580 PF02540 NAD synthase LCG53_03580 PF00795 Carbon-nitrogen hydrolase LCG53_03585 PF00543 Nitrogen regulatory protein P-II LCG53_03595 PF02664 S-Ribosylhomocysteinase (LuxS) LCG53_03600 PF00990 Diguanylate cyclase, GGDEF domain LCG53_03605 PF00773 RNB domain LCG53_03605 PF17876 Cold shock domain LCG53_03605 PF08461 Ribonuclease R winged-helix domain LCG53_03605 PF08206 Ribonuclease B OB domain LCG53_03605 PF00575 S1 RNA binding domain LCG53_03610 PF00588 SpoU rRNA Methylase family LCG53_03610 PF08032 RNA 2'-O ribose methyltransferase substrate binding LCG53_03620 PF13673 Acetyltransferase (GNAT) domain LCG53_03625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LCG53_03625 PF02272 DHHA1 domain LCG53_03625 PF01411 tRNA synthetases class II (A) LCG53_03630 PF01566 Natural resistance-associated macrophage protein LCG53_03635 PF01250 Ribosomal protein S6 LCG53_03640 PF01084 Ribosomal protein S18 LCG53_03645 PF03948 Ribosomal protein L9, C-terminal domain LCG53_03645 PF01281 Ribosomal protein L9, N-terminal domain LCG53_03650 PF00970 Oxidoreductase FAD-binding domain LCG53_03650 PF00175 Oxidoreductase NAD-binding domain LCG53_03670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCG53_03680 PF08990 Erythronolide synthase docking LCG53_03680 PF08240 Alcohol dehydrogenase GroES-like domain LCG53_03680 PF00698 Acyl transferase domain LCG53_03680 PF00109 Beta-ketoacyl synthase, N-terminal domain LCG53_03680 PF02801 Beta-ketoacyl synthase, C-terminal domain LCG53_03680 PF08659 KR domain LCG53_03680 PF00550 Phosphopantetheine attachment site LCG53_03680 PF16197 Ketoacyl-synthetase C-terminal extension LCG53_03680 PF14765 Polyketide synthase dehydratase LCG53_03685 PF09335 SNARE associated Golgi protein LCG53_03690 PF05193 Peptidase M16 inactive domain LCG53_03690 PF00675 Insulinase (Peptidase family M16) LCG53_03695 PF04262 Glutamate-cysteine ligase LCG53_03700 PF03605 Anaerobic c4-dicarboxylate membrane transporter LCG53_03705 PF00206 Lyase LCG53_03705 PF10415 Fumarase C C-terminus LCG53_03710 PF04186 FxsA cytoplasmic membrane protein LCG53_03715 PF01554 MatE LCG53_03720 PF00166 Chaperonin 10 Kd subunit LCG53_03725 PF00118 TCP-1/cpn60 chaperonin family LCG53_03735 PF00563 EAL domain LCG53_03735 PF00990 Diguanylate cyclase, GGDEF domain LCG53_03735 PF03707 Bacterial signalling protein N terminal repeat LCG53_03745 PF00849 RNA pseudouridylate synthase LCG53_03750 PF00271 Helicase conserved C-terminal domain LCG53_03750 PF12137 RNA polymerase recycling family C-terminal LCG53_03750 PF00176 SNF2 family N-terminal domain LCG53_03750 PF18339 RapA N-terminal Tudor like domain 1 LCG53_03750 PF18337 RapA N-terminal Tudor like domain LCG53_03795 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_03800 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_03805 PF00005 ABC transporter LCG53_03805 PF12857 TOBE-like domain LCG53_03810 PF03466 LysR substrate binding domain LCG53_03810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_03815 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LCG53_03815 PF18416 N-acetylglucosamine binding protein domain 2 LCG53_03820 PF17200 Single Cache domain 2 LCG53_03820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_03820 PF00672 HAMP domain LCG53_03845 PF11230 Protein of unknown function (DUF3029) LCG53_03850 PF04055 Radical SAM superfamily LCG53_03860 PF03466 LysR substrate binding domain LCG53_03860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_03865 PF00155 Aminotransferase class I and II LCG53_03880 PF06564 Cellulose biosynthesis protein BcsQ LCG53_03890 PF03552 Cellulose synthase LCG53_03890 PF00535 Glycosyl transferase family 2 LCG53_03890 PF07238 PilZ domain LCG53_03900 PF01270 Glycosyl hydrolases family 8 LCG53_03905 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) LCG53_03910 PF02583 Metal-sensitive transcriptional repressor LCG53_03925 PF18494 Pullulanase Ins domain LCG53_03925 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LCG53_03925 PF11852 Domain of unknown function (DUF3372) LCG53_03925 PF03714 Bacterial pullanase-associated domain LCG53_03925 PF17967 Pullulanase N2 domain LCG53_03935 PF03743 Bacterial conjugation TrbI-like protein LCG53_03940 PF03524 Conjugal transfer protein LCG53_03965 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LCG53_03975 PF04956 TrbC/VIRB2 family LCG53_03980 PF00437 Type II/IV secretion system protein LCG53_03990 PF02534 Type IV secretory system Conjugative DNA transfer LCG53_04000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_04000 PF03466 LysR substrate binding domain LCG53_04010 PF00440 Bacterial regulatory proteins, tetR family LCG53_04015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCG53_04020 PF00873 AcrB/AcrD/AcrF family LCG53_04025 PF00893 Small Multidrug Resistance protein LCG53_04045 PF10502 Signal peptidase, peptidase S26 LCG53_04060 PF13614 AAA domain LCG53_04090 PF05284 Protein of unknown function (DUF736) LCG53_04100 PF02195 ParB-like nuclease domain LCG53_04105 PF06067 Domain of unknown function (DUF932) LCG53_04120 PF04002 RadC-like JAB domain LCG53_04165 PF01381 Helix-turn-helix LCG53_04165 PF00145 C-5 cytosine-specific DNA methylase LCG53_04180 PF00403 Heavy-metal-associated domain LCG53_04185 PF08534 Redoxin LCG53_04190 PF00271 Helicase conserved C-terminal domain LCG53_04190 PF00270 DEAD/DEAH box helicase LCG53_04195 PF08447 PAS fold LCG53_04195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_04205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCG53_04215 PF10952 Protein of unknown function (DUF2753) LCG53_04220 PF00378 Enoyl-CoA hydratase/isomerase LCG53_04235 PF00106 short chain dehydrogenase LCG53_04240 PF00929 Exonuclease LCG53_04245 PF03129 Anticodon binding domain LCG53_04245 PF04073 Aminoacyl-tRNA editing domain LCG53_04245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LCG53_04255 PF07499 RuvA, C-terminal domain LCG53_04255 PF01330 RuvA N terminal domain LCG53_04260 PF17864 RuvB AAA lid domain LCG53_04260 PF05491 RuvB C-terminal winged helix domain LCG53_04260 PF05496 Holliday junction DNA helicase RuvB P-loop domain LCG53_04270 PF01654 Cytochrome bd terminal oxidase subunit I LCG53_04275 PF02322 Cytochrome bd terminal oxidase subunit II LCG53_04280 PF08173 Membrane bound YbgT-like protein LCG53_04285 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) LCG53_04290 PF03061 Thioesterase superfamily LCG53_04295 PF01618 MotA/TolQ/ExbB proton channel family LCG53_04300 PF02472 Biopolymer transport protein ExbD/TolR LCG53_04310 PF07676 WD40-like Beta Propeller Repeat LCG53_04310 PF04052 TolB amino-terminal domain LCG53_04315 PF00691 OmpA family LCG53_04320 PF16331 TolA binding protein trimerisation LCG53_04320 PF13174 Tetratricopeptide repeat LCG53_04395 PF00672 HAMP domain LCG53_04395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_04400 PF02445 Quinolinate synthetase A protein LCG53_04405 PF01263 Aldose 1-epimerase LCG53_04410 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LCG53_04410 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LCG53_04415 PF02446 4-alpha-glucanotransferase LCG53_04420 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LCG53_04420 PF02806 Alpha amylase, C-terminal all-beta domain LCG53_04420 PF00128 Alpha amylase, catalytic domain LCG53_04425 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LCG53_04425 PF00128 Alpha amylase, catalytic domain LCG53_04430 PF01641 SelR domain LCG53_04445 PF00293 NUDIX domain LCG53_04450 PF16884 N-terminal domain of oxidoreductase LCG53_04450 PF00107 Zinc-binding dehydrogenase LCG53_04455 PF01047 MarR family LCG53_04470 PF01037 Lrp/AsnC ligand binding domain LCG53_04480 PF07690 Major Facilitator Superfamily LCG53_04500 PF00209 Sodium:neurotransmitter symporter family LCG53_04505 PF00209 Sodium:neurotransmitter symporter family LCG53_04520 PF00155 Aminotransferase class I and II LCG53_04520 PF00392 Bacterial regulatory proteins, gntR family LCG53_04535 PF01177 Asp/Glu/Hydantoin racemase LCG53_04545 PF13006 Insertion element 4 transposase N-terminal LCG53_04545 PF01609 Transposase DDE domain LCG53_04550 PF00501 AMP-binding enzyme LCG53_04560 PF00583 Acetyltransferase (GNAT) family LCG53_04570 PF12592 Protein of unknown function (DUF3763) LCG53_04570 PF17868 AAA lid domain LCG53_04570 PF07728 AAA domain (dynein-related subfamily) LCG53_04575 PF05762 VWA domain containing CoxE-like protein LCG53_04580 PF08448 PAS fold LCG53_04580 PF00990 Diguanylate cyclase, GGDEF domain LCG53_04580 PF00563 EAL domain LCG53_04585 PF00990 Diguanylate cyclase, GGDEF domain LCG53_04585 PF00072 Response regulator receiver domain LCG53_04590 PF16658 Class II release factor RF3, C-terminal domain LCG53_04590 PF03144 Elongation factor Tu domain 2 LCG53_04590 PF00009 Elongation factor Tu GTP binding domain LCG53_04600 PF00583 Acetyltransferase (GNAT) family LCG53_04615 PF00583 Acetyltransferase (GNAT) family LCG53_04620 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LCG53_04630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_04630 PF03466 LysR substrate binding domain LCG53_04635 PF04371 Porphyromonas-type peptidyl-arginine deiminase LCG53_04640 PF01425 Amidase LCG53_04650 PF00753 Metallo-beta-lactamase superfamily LCG53_04665 PF12833 Helix-turn-helix domain LCG53_04665 PF02311 AraC-like ligand binding domain LCG53_04670 PF00175 Oxidoreductase NAD-binding domain LCG53_04670 PF00111 2Fe-2S iron-sulfur cluster binding domain LCG53_04670 PF00970 Oxidoreductase FAD-binding domain LCG53_04675 PF00271 Helicase conserved C-terminal domain LCG53_04675 PF00270 DEAD/DEAH box helicase LCG53_04680 PF00990 Diguanylate cyclase, GGDEF domain LCG53_04685 PF05643 Putative bacterial lipoprotein (DUF799) LCG53_04695 PF03783 Curli production assembly/transport component CsgG LCG53_04715 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase LCG53_04725 PF12704 MacB-like periplasmic core domain LCG53_04725 PF00005 ABC transporter LCG53_04725 PF02687 FtsX-like permease family LCG53_04730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCG53_04735 PF00486 Transcriptional regulatory protein, C terminal LCG53_04735 PF00072 Response regulator receiver domain LCG53_04740 PF00512 His Kinase A (phospho-acceptor) domain LCG53_04740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_04740 PF00672 HAMP domain LCG53_04740 PF16527 Two-component sensor protein CpxA, periplasmic domain LCG53_04760 PF00445 Ribonuclease T2 family LCG53_04765 PF03060 Nitronate monooxygenase LCG53_04795 PF00317 Ribonucleotide reductase, all-alpha domain LCG53_04795 PF08343 Ribonucleotide reductase N-terminal LCG53_04795 PF02867 Ribonucleotide reductase, barrel domain LCG53_04805 PF02562 PhoH-like protein LCG53_04805 PF13638 PIN domain LCG53_04815 PF00005 ABC transporter LCG53_04820 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_04840 PF00694 Aconitase C-terminal domain LCG53_04845 PF00330 Aconitase family (aconitate hydratase) LCG53_04850 PF00180 Isocitrate/isopropylmalate dehydrogenase LCG53_04855 PF08502 LeuA allosteric (dimerisation) domain LCG53_04855 PF00682 HMGL-like LCG53_04865 PF01569 PAP2 superfamily LCG53_04880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LCG53_04880 PF00205 Thiamine pyrophosphate enzyme, central domain LCG53_04880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LCG53_04885 PF10369 Small subunit of acetolactate synthase LCG53_04890 PF01515 Phosphate acetyl/butaryl transferase LCG53_04890 PF07085 DRTGG domain LCG53_04895 PF00871 Acetokinase family LCG53_04900 PF04217 Protein of unknown function, DUF412 LCG53_04905 PF03887 YfbU domain LCG53_04910 PF00578 AhpC/TSA family LCG53_04915 PF01842 ACT domain LCG53_04920 PF00701 Dihydrodipicolinate synthetase family LCG53_04925 PF06804 NlpB/DapX lipoprotein LCG53_04930 PF01259 SAICAR synthetase LCG53_04940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_04940 PF03466 LysR substrate binding domain LCG53_04945 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LCG53_04965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_04965 PF00512 His Kinase A (phospho-acceptor) domain LCG53_04965 PF18415 Histidine kinase receptor ArcB trans-membrane domain LCG53_04965 PF00989 PAS fold LCG53_04965 PF01627 Hpt domain LCG53_04965 PF00072 Response regulator receiver domain LCG53_04970 PF01966 HD domain LCG53_04970 PF13286 Phosphohydrolase-associated domain LCG53_04985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_04985 PF09456 RcsC Alpha-Beta-Loop (ABL) LCG53_04985 PF00072 Response regulator receiver domain LCG53_04985 PF00512 His Kinase A (phospho-acceptor) domain LCG53_04990 PF00563 EAL domain LCG53_04990 PF00990 Diguanylate cyclase, GGDEF domain LCG53_04990 PF03707 Bacterial signalling protein N terminal repeat LCG53_04995 PF00672 HAMP domain LCG53_04995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_05000 PF02357 Transcription termination factor nusG LCG53_05005 PF03180 NLPA lipoprotein LCG53_05010 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_05015 PF09383 NIL domain LCG53_05015 PF00005 ABC transporter LCG53_05025 PF00480 ROK family LCG53_05030 PF08331 Domain of unknown function (DUF1730) LCG53_05035 PF03853 YjeF-related protein N-terminus LCG53_05035 PF01256 Carbohydrate kinase LCG53_05040 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LCG53_05045 PF01520 N-acetylmuramoyl-L-alanine amidase LCG53_05050 PF08676 MutL C terminal dimerisation domain LCG53_05050 PF01119 DNA mismatch repair protein, C-terminal domain LCG53_05060 PF17209 Hfq protein LCG53_05065 PF01926 50S ribosome-binding GTPase LCG53_05065 PF13167 GTP-binding GTPase N-terminal LCG53_05065 PF16360 GTP-binding GTPase Middle Region LCG53_05070 PF12221 Bacterial membrane protein N terminal LCG53_05070 PF01145 SPFH domain / Band 7 family LCG53_05075 PF01145 SPFH domain / Band 7 family LCG53_05080 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) LCG53_05085 PF00348 Polyprenyl synthetase LCG53_05090 PF00829 Ribosomal prokaryotic L21 protein LCG53_05095 PF01016 Ribosomal L27 protein LCG53_05100 PF01018 GTP1/OBG LCG53_05100 PF01926 50S ribosome-binding GTPase LCG53_05105 PF07670 Nucleoside recognition LCG53_05115 PF00296 Luciferase-like monooxygenase LCG53_05125 PF00149 Calcineurin-like phosphoesterase LCG53_05130 PF04379 ApaG domain LCG53_05135 PF00398 Ribosomal RNA adenine dimethylase LCG53_05140 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LCG53_05145 PF00639 PPIC-type PPIASE domain LCG53_05145 PF09312 SurA N-terminal domain LCG53_05150 PF03968 OstA-like protein LCG53_05150 PF04453 LPS transport system D LCG53_05155 PF01636 Phosphotransferase enzyme family LCG53_05160 PF00483 Nucleotidyl transferase LCG53_05165 PF00226 DnaJ domain LCG53_05165 PF05099 Tellurite resistance protein TerB LCG53_05170 PF00860 Permease family LCG53_05180 PF00005 ABC transporter LCG53_05180 PF12848 ABC transporter LCG53_05185 PF01464 Transglycosylase SLT domain LCG53_05190 PF00535 Glycosyl transferase family 2 LCG53_05200 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LCG53_05205 PF01370 NAD dependent epimerase/dehydratase family LCG53_05210 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LCG53_05210 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LCG53_05210 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LCG53_05220 PF00005 ABC transporter LCG53_05225 PF01032 FecCD transport family LCG53_05235 PF06228 Haem utilisation ChuX/HutX LCG53_05240 PF01243 Pyridoxamine 5'-phosphate oxidase LCG53_05260 PF07715 TonB-dependent Receptor Plug Domain LCG53_05260 PF00593 TonB dependent receptor LCG53_05265 PF12832 MFS_1 like family LCG53_05270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_05270 PF00512 His Kinase A (phospho-acceptor) domain LCG53_05270 PF00989 PAS fold LCG53_05275 PF08329 Chitinase A, N-terminal domain LCG53_05275 PF00704 Glycosyl hydrolases family 18 LCG53_05280 PF13847 Methyltransferase domain LCG53_05285 PF00027 Cyclic nucleotide-binding domain LCG53_05285 PF13545 Crp-like helix-turn-helix domain LCG53_05290 PF02566 OsmC-like protein LCG53_05305 PF00485 Phosphoribulokinase / Uridine kinase family LCG53_05310 PF06794 Uncharacterised protein family (UPF0270) LCG53_05315 PF00563 EAL domain LCG53_05315 PF01590 GAF domain LCG53_05315 PF00990 Diguanylate cyclase, GGDEF domain LCG53_05315 PF00360 Phytochrome region LCG53_05320 PF00561 alpha/beta hydrolase fold LCG53_05325 PF01584 CheW-like domain LCG53_05325 PF00072 Response regulator receiver domain LCG53_05335 PF09526 Probable metal-binding protein (DUF2387) LCG53_05340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCG53_05345 PF04102 SlyX LCG53_05355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCG53_05355 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LCG53_05360 PF02954 Bacterial regulatory protein, Fis family LCG53_05360 PF00072 Response regulator receiver domain LCG53_05360 PF00158 Sigma-54 interaction domain LCG53_05380 PF02872 5'-nucleotidase, C-terminal domain LCG53_05380 PF00149 Calcineurin-like phosphoesterase LCG53_05390 PF03796 DnaB-like helicase C terminal domain LCG53_05390 PF00772 DnaB-like helicase N terminal domain LCG53_05395 PF01168 Alanine racemase, N-terminal domain LCG53_05395 PF00842 Alanine racemase, C-terminal domain LCG53_05400 PF00171 Aldehyde dehydrogenase family LCG53_05400 PF01619 Proline dehydrogenase LCG53_05400 PF14850 DNA-binding domain of Proline dehydrogenase LCG53_05400 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LCG53_05410 PF10415 Fumarase C C-terminus LCG53_05410 PF00206 Lyase LCG53_05420 PF00529 HlyD membrane-fusion protein of T1SS LCG53_05420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCG53_05425 PF07690 Major Facilitator Superfamily LCG53_05430 PF03575 Peptidase family S51 LCG53_05435 PF00072 Response regulator receiver domain LCG53_05435 PF00196 Bacterial regulatory proteins, luxR family LCG53_05440 PF00989 PAS fold LCG53_05440 PF00512 His Kinase A (phospho-acceptor) domain LCG53_05440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_05445 PF13247 4Fe-4S dicluster domain LCG53_05450 PF03916 Polysulphide reductase, NrfD LCG53_05455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LCG53_05455 PF00384 Molybdopterin oxidoreductase LCG53_05455 PF01568 Molydopterin dinucleotide binding domain LCG53_05490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LCG53_05490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LCG53_05495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_05495 PF03466 LysR substrate binding domain LCG53_05500 PF01810 LysE type translocator LCG53_05505 PF12392 Collagenase LCG53_05505 PF01136 Peptidase family U32 LCG53_05515 PF06906 Protein of unknown function (DUF1272) LCG53_05525 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LCG53_05525 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LCG53_05530 PF00730 HhH-GPD superfamily base excision DNA repair protein LCG53_05530 PF06029 AlkA N-terminal domain LCG53_05530 PF12833 Helix-turn-helix domain LCG53_05530 PF02805 Metal binding domain of Ada LCG53_05535 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LCG53_05560 PF00106 short chain dehydrogenase LCG53_05565 PF03573 outer membrane porin, OprD family LCG53_05570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_05580 PF02447 GntP family permease LCG53_05585 PF01370 NAD dependent epimerase/dehydratase family LCG53_05590 PF01261 Xylose isomerase-like TIM barrel LCG53_05595 PF00596 Class II Aldolase and Adducin N-terminal domain LCG53_05600 PF17042 Nucleotide-binding C-terminal domain LCG53_05600 PF07005 Sugar-binding N-terminal domain LCG53_05605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LCG53_05605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LCG53_05610 PF00455 DeoR C terminal sensor domain LCG53_05610 PF08220 DeoR-like helix-turn-helix domain LCG53_05620 PF07995 Glucose / Sorbosone dehydrogenase LCG53_05660 PF10124 Mu-like prophage major head subunit gpT LCG53_05695 PF00800 Prephenate dehydratase LCG53_05695 PF01817 Chorismate mutase type II LCG53_05720 PF08349 Protein of unknown function (DUF1722) LCG53_05725 PF13411 MerR HTH family regulatory protein LCG53_05730 PF00875 DNA photolyase LCG53_05730 PF03441 FAD binding domain of DNA photolyase LCG53_05740 PF00106 short chain dehydrogenase LCG53_05780 PF00210 Ferritin-like domain LCG53_05785 PF03063 Prismane/CO dehydrogenase family LCG53_05790 PF00111 2Fe-2S iron-sulfur cluster binding domain LCG53_05790 PF00970 Oxidoreductase FAD-binding domain LCG53_05790 PF00175 Oxidoreductase NAD-binding domain LCG53_05795 PF16363 GDP-mannose 4,6 dehydratase LCG53_05810 PF00873 AcrB/AcrD/AcrF family LCG53_05815 PF00529 HlyD membrane-fusion protein of T1SS LCG53_05815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCG53_05825 PF00072 Response regulator receiver domain LCG53_05825 PF00486 Transcriptional regulatory protein, C terminal LCG53_05830 PF00672 HAMP domain LCG53_05830 PF00512 His Kinase A (phospho-acceptor) domain LCG53_05830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_05840 PF00916 Sulfate permease family LCG53_05840 PF01740 STAS domain LCG53_05845 PF01965 DJ-1/PfpI family LCG53_05850 PF02558 Ketopantoate reductase PanE/ApbA LCG53_05850 PF08546 Ketopantoate reductase PanE/ApbA C terminal LCG53_05855 PF04461 Protein of unknown function (DUF520) LCG53_05860 PF03502 Nucleoside-specific channel-forming protein, Tsx LCG53_05865 PF07690 Major Facilitator Superfamily LCG53_05875 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LCG53_05885 PF05175 Methyltransferase small domain LCG53_05890 PF01722 BolA-like protein LCG53_05895 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LCG53_05895 PF11973 NQRA C-terminal domain LCG53_05900 PF03116 NQR2, RnfD, RnfE family LCG53_05905 PF04205 FMN-binding domain LCG53_05910 PF02508 Rnf-Nqr subunit, membrane protein LCG53_05915 PF02508 Rnf-Nqr subunit, membrane protein LCG53_05920 PF00970 Oxidoreductase FAD-binding domain LCG53_05920 PF00111 2Fe-2S iron-sulfur cluster binding domain LCG53_05920 PF00175 Oxidoreductase NAD-binding domain LCG53_05925 PF02424 ApbE family LCG53_05940 PF11798 IMS family HHH motif LCG53_05940 PF00817 impB/mucB/samB family LCG53_05940 PF11799 impB/mucB/samB family C-terminal domain LCG53_05945 PF00672 HAMP domain LCG53_05945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_05950 PF03466 LysR substrate binding domain LCG53_05950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_05965 PF18125 RlmM ferredoxin-like domain LCG53_05965 PF01728 FtsJ-like methyltransferase LCG53_05975 PF00180 Isocitrate/isopropylmalate dehydrogenase LCG53_05975 PF18324 Hypothetical protein TT1725 LCG53_05980 PF01367 5'-3' exonuclease, C-terminal SAM fold LCG53_05980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LCG53_05985 PF11892 Domain of unknown function (DUF3412) LCG53_05985 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LCG53_05985 PF03641 Possible lysine decarboxylase LCG53_05990 PF00990 Diguanylate cyclase, GGDEF domain LCG53_06000 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LCG53_06000 PF14489 QueF-like protein LCG53_06005 PF07348 Syd protein (SUKH-2) LCG53_06010 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) LCG53_06035 PF04287 tRNA pseudouridine synthase C LCG53_06040 PF00849 RNA pseudouridylate synthase LCG53_06045 PF00258 Flavodoxin LCG53_06055 PF02264 LamB porin LCG53_06060 PF07148 Maltose operon periplasmic protein precursor (MalM) LCG53_06065 PF00367 phosphotransferase system, EIIB LCG53_06065 PF02378 Phosphotransferase system, EIIC LCG53_06070 PF11944 Protein of unknown function (DUF3461) LCG53_06075 PF14602 Hexapeptide repeat of succinyl-transferase LCG53_06075 PF00132 Bacterial transferase hexapeptide (six repeats) LCG53_06075 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LCG53_06080 PF01909 Nucleotidyltransferase domain LCG53_06080 PF01966 HD domain LCG53_06080 PF08335 GlnD PII-uridylyltransferase LCG53_06080 PF01842 ACT domain LCG53_06085 PF00557 Metallopeptidase family M24 LCG53_06090 PF00318 Ribosomal protein S2 LCG53_06095 PF00889 Elongation factor TS LCG53_06100 PF00696 Amino acid kinase family LCG53_06105 PF01765 Ribosome recycling factor LCG53_06110 PF01255 Putative undecaprenyl diphosphate synthase LCG53_06120 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LCG53_06120 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LCG53_06120 PF13288 DXP reductoisomerase C-terminal domain LCG53_06125 PF17820 PDZ domain LCG53_06125 PF02163 Peptidase family M50 LCG53_06130 PF01103 Surface antigen LCG53_06130 PF07244 Surface antigen variable number repeat LCG53_06135 PF03938 Outer membrane protein (OmpH-like) LCG53_06140 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LCG53_06140 PF00132 Bacterial transferase hexapeptide (six repeats) LCG53_06145 PF07977 FabA-like domain LCG53_06150 PF00132 Bacterial transferase hexapeptide (six repeats) LCG53_06150 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LCG53_06155 PF02684 Lipid-A-disaccharide synthetase LCG53_06160 PF01351 Ribonuclease HII LCG53_06165 PF07733 Bacterial DNA polymerase III alpha NTPase domain LCG53_06165 PF14579 Helix-hairpin-helix motif LCG53_06165 PF02811 PHP domain LCG53_06165 PF01336 OB-fold nucleic acid binding domain LCG53_06165 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LCG53_06170 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LCG53_06180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_06180 PF03466 LysR substrate binding domain LCG53_06190 PF13520 Amino acid permease LCG53_06200 PF00005 ABC transporter LCG53_06200 PF16326 ABC transporter C-terminal domain LCG53_06200 PF12848 ABC transporter LCG53_06210 PF01431 Peptidase family M13 LCG53_06210 PF05649 Peptidase family M13 LCG53_06215 PF01171 PP-loop family LCG53_06215 PF09179 TilS substrate binding domain LCG53_06215 PF11734 TilS substrate C-terminal domain LCG53_06220 PF00990 Diguanylate cyclase, GGDEF domain LCG53_06225 PF02254 TrkA-N domain LCG53_06225 PF00999 Sodium/hydrogen exchanger family LCG53_06225 PF02080 TrkA-C domain LCG53_06245 PF00072 Response regulator receiver domain LCG53_06245 PF00196 Bacterial regulatory proteins, luxR family LCG53_06255 PF00128 Alpha amylase, catalytic domain LCG53_06270 PF00535 Glycosyl transferase family 2 LCG53_06285 PF03734 L,D-transpeptidase catalytic domain LCG53_06285 PF01471 Putative peptidoglycan binding domain LCG53_06290 PF05951 Bacterial protein of unknown function (DUF882) LCG53_06300 PF03458 UPF0126 domain LCG53_06310 PF06470 SMC proteins Flexible Hinge Domain LCG53_06310 PF02463 RecF/RecN/SMC N terminal domain LCG53_06315 PF04354 ZipA, C-terminal FtsZ-binding domain LCG53_06320 PF00533 BRCA1 C Terminus (BRCT) domain LCG53_06320 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LCG53_06320 PF01653 NAD-dependent DNA ligase adenylation domain LCG53_06320 PF03120 NAD-dependent DNA ligase OB-fold domain LCG53_06320 PF12826 Helix-hairpin-helix motif LCG53_06330 PF03477 ATP cone domain LCG53_06330 PF13597 Anaerobic ribonucleoside-triphosphate reductase LCG53_06340 PF01679 Proteolipid membrane potential modulator LCG53_06360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCG53_06360 PF00529 HlyD membrane-fusion protein of T1SS LCG53_06365 PF01047 MarR family LCG53_06370 PF00989 PAS fold LCG53_06370 PF17203 Single cache domain 3 LCG53_06370 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LCG53_06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_06375 PF12431 Transcriptional regulator LCG53_06375 PF00072 Response regulator receiver domain LCG53_06385 PF00248 Aldo/keto reductase family LCG53_06395 PF00892 EamA-like transporter family LCG53_06405 PF00171 Aldehyde dehydrogenase family LCG53_06410 PF01590 GAF domain LCG53_06410 PF02954 Bacterial regulatory protein, Fis family LCG53_06410 PF00158 Sigma-54 interaction domain LCG53_06415 PF00990 Diguanylate cyclase, GGDEF domain LCG53_06415 PF07694 5TMR of 5TMR-LYT LCG53_06420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCG53_06425 PF00072 Response regulator receiver domain LCG53_06425 PF00486 Transcriptional regulatory protein, C terminal LCG53_06430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_06430 PF00512 His Kinase A (phospho-acceptor) domain LCG53_06430 PF00989 PAS fold LCG53_06430 PF11808 Phosphate regulon sensor protein PhoR LCG53_06435 PF12849 PBP superfamily domain LCG53_06440 PF01435 Peptidase family M48 LCG53_06450 PF00480 ROK family LCG53_06455 PF03932 CutC family LCG53_06460 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LCG53_06460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCG53_06465 PF00005 ABC transporter LCG53_06470 PF00795 Carbon-nitrogen hydrolase LCG53_06480 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCG53_06485 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_06490 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_06495 PF00005 ABC transporter LCG53_06505 PF00293 NUDIX domain LCG53_06510 PF08534 Redoxin LCG53_06515 PF01699 Sodium/calcium exchanger protein LCG53_06520 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LCG53_06520 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LCG53_06525 PF01235 Sodium:alanine symporter family LCG53_06535 PF00860 Permease family LCG53_06540 PF00072 Response regulator receiver domain LCG53_06540 PF00990 Diguanylate cyclase, GGDEF domain LCG53_06545 PF10692 Protein of unknown function (DUF2498) LCG53_06550 PF01554 MatE LCG53_06555 PF12833 Helix-turn-helix domain LCG53_06560 PF00390 Malic enzyme, N-terminal domain LCG53_06560 PF03949 Malic enzyme, NAD binding domain LCG53_06565 PF00691 OmpA family LCG53_06565 PF01389 OmpA-like transmembrane domain LCG53_06570 PF00691 OmpA family LCG53_06570 PF01389 OmpA-like transmembrane domain LCG53_06575 PF00691 OmpA family LCG53_06575 PF01389 OmpA-like transmembrane domain LCG53_06590 PF00209 Sodium:neurotransmitter symporter family LCG53_06595 PF01734 Patatin-like phospholipase LCG53_06600 PF00990 Diguanylate cyclase, GGDEF domain LCG53_06600 PF17158 Membrane-associated sensor, integral membrane domain LCG53_06610 PF00873 AcrB/AcrD/AcrF family LCG53_06615 PF08497 Radical SAM N-terminal LCG53_06615 PF11842 Domain of unknown function (DUF3362) LCG53_06615 PF04055 Radical SAM superfamily LCG53_06620 PF00931 NB-ARC domain LCG53_06620 PF00400 WD domain, G-beta repeat LCG53_06640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LCG53_06645 PF02075 Crossover junction endodeoxyribonuclease RuvC LCG53_06650 PF00230 Major intrinsic protein LCG53_06680 PF10145 Phage-related minor tail protein LCG53_06680 PF01464 Transglycosylase SLT domain LCG53_06680 PF01551 Peptidase family M23 LCG53_06695 PF13396 Phospholipase_D-nuclease N-terminal LCG53_06695 PF13091 PLD-like domain LCG53_06705 PF01842 ACT domain LCG53_06705 PF00551 Formyl transferase LCG53_06710 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LCG53_06720 PF00085 Thioredoxin LCG53_06725 PF01648 4'-phosphopantetheinyl transferase superfamily LCG53_06730 PF00877 NlpC/P60 family LCG53_06735 PF05971 RNA methyltransferase LCG53_06740 PF01575 MaoC like domain LCG53_06750 PF03734 L,D-transpeptidase catalytic domain LCG53_06750 PF17969 L,D-transpeptidase C-terminal domain LCG53_06750 PF01476 LysM domain LCG53_06760 PF13495 Phage integrase, N-terminal SAM-like domain LCG53_06760 PF00589 Phage integrase family LCG53_06775 PF01526 Tn3 transposase DDE domain LCG53_06775 PF13700 Domain of unknown function (DUF4158) LCG53_06780 PF00239 Resolvase, N terminal domain LCG53_06780 PF02796 Helix-turn-helix domain of resolvase LCG53_06805 PF00893 Small Multidrug Resistance protein LCG53_06810 PF00809 Pterin binding enzyme LCG53_06825 PF13610 DDE domain LCG53_06835 PF02534 Type IV secretory system Conjugative DNA transfer LCG53_06840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_06840 PF03466 LysR substrate binding domain LCG53_06845 PF07690 Major Facilitator Superfamily LCG53_06860 PF00872 Transposase, Mutator family LCG53_06870 PF02796 Helix-turn-helix domain of resolvase LCG53_06870 PF00239 Resolvase, N terminal domain LCG53_06875 PF01636 Phosphotransferase enzyme family LCG53_06880 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LCG53_06885 PF10502 Signal peptidase, peptidase S26 LCG53_06905 PF13610 DDE domain LCG53_06915 PF09618 CRISPR-associated protein (Cas_Csy4) LCG53_06920 PF09615 CRISPR-associated protein (Cas_Csy3) LCG53_06925 PF09614 CRISPR-associated protein (Cas_Csy2) LCG53_06930 PF09611 CRISPR-associated protein (Cas_Csy1) LCG53_06940 PF01867 CRISPR associated protein Cas1 LCG53_06975 PF04002 RadC-like JAB domain LCG53_07020 PF05930 Prophage CP4-57 regulatory protein (AlpA) LCG53_07025 PF00816 H-NS histone family LCG53_07035 PF13356 Arm DNA-binding domain LCG53_07035 PF00589 Phage integrase family LCG53_07040 PF00072 Response regulator receiver domain LCG53_07040 PF09308 LuxQ, periplasmic LCG53_07040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_07040 PF00512 His Kinase A (phospho-acceptor) domain LCG53_07060 PF10725 Protein of unknown function (DUF2517) LCG53_07065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_07065 PF01627 Hpt domain LCG53_07065 PF00989 PAS fold LCG53_07065 PF00072 Response regulator receiver domain LCG53_07065 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCG53_07065 PF00512 His Kinase A (phospho-acceptor) domain LCG53_07070 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LCG53_07075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCG53_07075 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LCG53_07080 PF02690 Na+/Pi-cotransporter LCG53_07090 PF13520 Amino acid permease LCG53_07095 PF00324 Amino acid permease LCG53_07105 PF00202 Aminotransferase class-III LCG53_07110 PF00171 Aldehyde dehydrogenase family LCG53_07115 PF07883 Cupin domain LCG53_07115 PF01381 Helix-turn-helix LCG53_07120 PF01266 FAD dependent oxidoreductase LCG53_07150 PF02954 Bacterial regulatory protein, Fis family LCG53_07150 PF00072 Response regulator receiver domain LCG53_07150 PF00158 Sigma-54 interaction domain LCG53_07155 PF00999 Sodium/hydrogen exchanger family LCG53_07155 PF02254 TrkA-N domain LCG53_07170 PF04381 Putative exonuclease, RdgC LCG53_07175 PF00583 Acetyltransferase (GNAT) family LCG53_07180 PF00149 Calcineurin-like phosphoesterase LCG53_07180 PF12320 Type 5 capsule protein repressor C-terminal domain LCG53_07190 PF01292 Prokaryotic cytochrome b561 LCG53_07195 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LCG53_07200 PF05524 PEP-utilising enzyme, N-terminal LCG53_07200 PF00391 PEP-utilising enzyme, mobile domain LCG53_07200 PF02896 PEP-utilising enzyme, TIM barrel domain LCG53_07205 PF00381 PTS HPr component phosphorylation site LCG53_07210 PF00291 Pyridoxal-phosphate dependent enzyme LCG53_07215 PF01434 Peptidase family M41 LCG53_07215 PF00004 ATPase family associated with various cellular activities (AAA) LCG53_07215 PF17862 AAA+ lid domain LCG53_07215 PF06480 FtsH Extracellular LCG53_07225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LCG53_07225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LCG53_07230 PF01980 tRNA-methyltransferase O LCG53_07230 PF18389 TrmO C-terminal domain LCG53_07250 PF00664 ABC transporter transmembrane region LCG53_07250 PF00005 ABC transporter LCG53_07255 PF00664 ABC transporter transmembrane region LCG53_07255 PF00005 ABC transporter LCG53_07270 PF00072 Response regulator receiver domain LCG53_07270 PF00486 Transcriptional regulatory protein, C terminal LCG53_07280 PF03737 Aldolase/RraA LCG53_07295 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LCG53_07300 PF00588 SpoU rRNA Methylase family LCG53_07305 PF01842 ACT domain LCG53_07305 PF13840 ACT domain LCG53_07305 PF00742 Homoserine dehydrogenase LCG53_07305 PF03447 Homoserine dehydrogenase, NAD binding domain LCG53_07305 PF00696 Amino acid kinase family LCG53_07310 PF08544 GHMP kinases C terminal LCG53_07310 PF00288 GHMP kinases N terminal domain LCG53_07315 PF00291 Pyridoxal-phosphate dependent enzyme LCG53_07315 PF14821 Threonine synthase N terminus LCG53_07330 PF17755 UvrA DNA-binding domain LCG53_07330 PF00005 ABC transporter LCG53_07330 PF17760 UvrA interaction domain LCG53_07335 PF01797 Transposase IS200 like LCG53_07345 PF02028 BCCT, betaine/carnitine/choline family transporter LCG53_07355 PF05114 Protein of unknown function (DUF692) LCG53_07375 PF13426 PAS domain LCG53_07375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_07375 PF08447 PAS fold LCG53_07390 PF04632 Fusaric acid resistance protein family LCG53_07395 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LCG53_07400 PF12804 MobA-like NTP transferase domain LCG53_07405 PF03949 Malic enzyme, NAD binding domain LCG53_07405 PF00390 Malic enzyme, N-terminal domain LCG53_07415 PF00860 Permease family LCG53_07425 PF10282 Lactonase, 7-bladed beta-propeller LCG53_07430 PF01810 LysE type translocator LCG53_07435 PF12794 Mechanosensitive ion channel inner membrane domain 1 LCG53_07435 PF12795 Mechanosensitive ion channel porin domain LCG53_07435 PF00924 Mechanosensitive ion channel LCG53_07440 PF02887 Pyruvate kinase, alpha/beta domain LCG53_07440 PF00224 Pyruvate kinase, barrel domain LCG53_07445 PF08007 Cupin superfamily protein LCG53_07450 PF08328 Adenylosuccinate lyase C-terminal LCG53_07450 PF00206 Lyase LCG53_07455 PF04356 Protein of unknown function (DUF489) LCG53_07465 PF00293 NUDIX domain LCG53_07470 PF00849 RNA pseudouridylate synthase LCG53_07475 PF00583 Acetyltransferase (GNAT) family LCG53_07510 PF00180 Isocitrate/isopropylmalate dehydrogenase LCG53_07520 PF00291 Pyridoxal-phosphate dependent enzyme LCG53_07525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_07525 PF03466 LysR substrate binding domain LCG53_07530 PF00816 H-NS histone family LCG53_07535 PF00793 DAHP synthetase I family LCG53_07540 PF08021 Siderophore-interacting FAD-binding domain LCG53_07540 PF04954 Siderophore-interacting protein LCG53_07545 PF02321 Outer membrane efflux protein LCG53_07550 PF12704 MacB-like periplasmic core domain LCG53_07550 PF00005 ABC transporter LCG53_07550 PF02687 FtsX-like permease family LCG53_07555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCG53_07565 PF02463 RecF/RecN/SMC N terminal domain LCG53_07570 PF00990 Diguanylate cyclase, GGDEF domain LCG53_07570 PF17158 Membrane-associated sensor, integral membrane domain LCG53_07575 PF01513 ATP-NAD kinase LCG53_07580 PF01025 GrpE LCG53_07585 PF00012 Hsp70 protein LCG53_07590 PF00684 DnaJ central domain LCG53_07590 PF00226 DnaJ domain LCG53_07590 PF01556 DnaJ C terminal domain LCG53_07595 PF02264 LamB porin LCG53_07595 PF11471 Maltoporin periplasmic N-terminal extension LCG53_07600 PF00294 pfkB family carbohydrate kinase LCG53_07605 PF00367 phosphotransferase system, EIIB LCG53_07605 PF02378 Phosphotransferase system, EIIC LCG53_07610 PF08244 Glycosyl hydrolases family 32 C terminal LCG53_07610 PF00251 Glycosyl hydrolases family 32 N-terminal domain LCG53_07615 PF00356 Bacterial regulatory proteins, lacI family LCG53_07615 PF13407 Periplasmic binding protein domain LCG53_07620 PF02308 MgtC family LCG53_07630 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCG53_07640 PF01022 Bacterial regulatory protein, arsR family LCG53_07645 PF04143 Sulphur transport LCG53_07660 PF00873 AcrB/AcrD/AcrF family LCG53_07665 PF00563 EAL domain LCG53_07665 PF00990 Diguanylate cyclase, GGDEF domain LCG53_07665 PF03707 Bacterial signalling protein N terminal repeat LCG53_07670 PF10437 Bacterial lipoate protein ligase C-terminus LCG53_07670 PF03099 Biotin/lipoate A/B protein ligase family LCG53_07685 PF00873 AcrB/AcrD/AcrF family LCG53_07690 PF00529 HlyD membrane-fusion protein of T1SS LCG53_07690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCG53_07700 PF03372 Endonuclease/Exonuclease/phosphatase family LCG53_07710 PF00072 Response regulator receiver domain LCG53_07715 PF00011 Hsp20/alpha crystallin family LCG53_07720 PF02424 ApbE family LCG53_07725 PF00127 Copper binding proteins, plastocyanin/azurin family LCG53_07740 PF01047 MarR family LCG53_07750 PF01156 Inosine-uridine preferring nucleoside hydrolase LCG53_07760 PF03466 LysR substrate binding domain LCG53_07760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_07765 PF02627 Carboxymuconolactone decarboxylase family LCG53_07770 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LCG53_07770 PF06481 COX Aromatic Rich Motif LCG53_07775 PF00115 Cytochrome C and Quinol oxidase polypeptide I LCG53_07780 PF00510 Cytochrome c oxidase subunit III LCG53_07785 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LCG53_07790 PF01040 UbiA prenyltransferase family LCG53_07800 PF07690 Major Facilitator Superfamily LCG53_07805 PF07237 Protein of unknown function (DUF1428) LCG53_07815 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_07820 PF00005 ABC transporter LCG53_07825 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LCG53_07835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_07835 PF03466 LysR substrate binding domain LCG53_07850 PF07804 HipA-like C-terminal domain LCG53_07850 PF13657 HipA N-terminal domain LCG53_07855 PF01381 Helix-turn-helix LCG53_07870 PF00290 Tryptophan synthase alpha chain LCG53_07875 PF00291 Pyridoxal-phosphate dependent enzyme LCG53_07880 PF00218 Indole-3-glycerol phosphate synthase LCG53_07880 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LCG53_07885 PF02885 Glycosyl transferase family, helical bundle domain LCG53_07885 PF00591 Glycosyl transferase family, a/b domain LCG53_07890 PF00117 Glutamine amidotransferase class-I LCG53_07890 PF02885 Glycosyl transferase family, helical bundle domain LCG53_07890 PF00591 Glycosyl transferase family, a/b domain LCG53_07895 PF04715 Anthranilate synthase component I, N terminal region LCG53_07895 PF00425 chorismate binding enzyme LCG53_07900 PF02811 PHP domain LCG53_07905 PF01300 Telomere recombination LCG53_07910 PF02616 Segregation and condensation protein ScpA LCG53_07915 PF04079 Segregation and condensation complex subunit ScpB LCG53_07920 PF00849 RNA pseudouridylate synthase LCG53_07920 PF01479 S4 domain LCG53_07930 PF01610 Transposase LCG53_07930 PF13542 Helix-turn-helix domain of transposase family ISL3 LCG53_07930 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 LCG53_07945 PF08361 MAATS-type transcriptional repressor, C-terminal region LCG53_07945 PF00440 Bacterial regulatory proteins, tetR family LCG53_07950 PF00529 HlyD membrane-fusion protein of T1SS LCG53_07950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCG53_07955 PF00873 AcrB/AcrD/AcrF family LCG53_07960 PF02321 Outer membrane efflux protein LCG53_07980 PF05598 Transposase domain (DUF772) LCG53_07980 PF01609 Transposase DDE domain LCG53_08015 PF04002 RadC-like JAB domain LCG53_08030 PF01717 Cobalamin-independent synthase, Catalytic domain LCG53_08040 PF03358 NADPH-dependent FMN reductase LCG53_08045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_08045 PF03466 LysR substrate binding domain LCG53_08055 PF13438 Domain of unknown function (DUF4113) LCG53_08055 PF00817 impB/mucB/samB family LCG53_08055 PF11799 impB/mucB/samB family C-terminal domain LCG53_08070 PF00440 Bacterial regulatory proteins, tetR family LCG53_08075 PF02770 Acyl-CoA dehydrogenase, middle domain LCG53_08075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCG53_08075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCG53_08075 PF09317 Domain of unknown function (DUF1974) LCG53_08080 PF07282 Putative transposase DNA-binding domain LCG53_08080 PF01385 Probable transposase LCG53_08080 PF12323 Helix-turn-helix domain LCG53_08100 PF00224 Pyruvate kinase, barrel domain LCG53_08100 PF02887 Pyruvate kinase, alpha/beta domain LCG53_08105 PF01380 SIS domain LCG53_08105 PF01418 Helix-turn-helix domain, rpiR family LCG53_08110 PF02685 Glucokinase LCG53_08115 PF13358 DDE superfamily endonuclease LCG53_08115 PF13592 Winged helix-turn helix LCG53_08120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_08130 PF01385 Probable transposase LCG53_08130 PF07282 Putative transposase DNA-binding domain LCG53_08130 PF12323 Helix-turn-helix domain LCG53_08145 PF16363 GDP-mannose 4,6 dehydratase LCG53_08150 PF04321 RmlD substrate binding domain LCG53_08155 PF00483 Nucleotidyl transferase LCG53_08160 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LCG53_08165 PF01061 ABC-2 type transporter LCG53_08170 PF00005 ABC transporter LCG53_08190 PF02350 UDP-N-acetylglucosamine 2-epimerase LCG53_08205 PF01370 NAD dependent epimerase/dehydratase family LCG53_08210 PF00953 Glycosyl transferase family 4 LCG53_08215 PF02719 Polysaccharide biosynthesis protein LCG53_08220 PF00953 Glycosyl transferase family 4 LCG53_08225 PF01609 Transposase DDE domain LCG53_08230 PF00953 Glycosyl transferase family 4 LCG53_08235 PF16363 GDP-mannose 4,6 dehydratase LCG53_08245 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LCG53_08255 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LCG53_08260 PF00132 Bacterial transferase hexapeptide (six repeats) LCG53_08265 PF00535 Glycosyl transferase family 2 LCG53_08295 PF00535 Glycosyl transferase family 2 LCG53_08305 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LCG53_08305 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LCG53_08310 PF02563 Polysaccharide biosynthesis/export protein LCG53_08310 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LCG53_08310 PF10531 SLBB domain LCG53_08315 PF01451 Low molecular weight phosphotyrosine protein phosphatase LCG53_08320 PF02706 Chain length determinant protein LCG53_08320 PF13807 G-rich domain on putative tyrosine kinase LCG53_08320 PF13614 AAA domain LCG53_08335 PF06251 Capsule biosynthesis GfcC LCG53_08340 PF06082 Exopolysaccharide biosynthesis protein YbjH LCG53_08350 PF04337 Protein of unknown function, DUF480 LCG53_08360 PF12323 Helix-turn-helix domain LCG53_08360 PF01385 Probable transposase LCG53_08360 PF07282 Putative transposase DNA-binding domain LCG53_08365 PF00271 Helicase conserved C-terminal domain LCG53_08365 PF00176 SNF2 family N-terminal domain LCG53_08365 PF04434 SWIM zinc finger LCG53_08370 PF05472 DNA replication terminus site-binding protein (Ter protein) LCG53_08380 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LCG53_08385 PF00676 Dehydrogenase E1 component LCG53_08390 PF02779 Transketolase, pyrimidine binding domain LCG53_08390 PF02780 Transketolase, C-terminal domain LCG53_08395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LCG53_08395 PF00364 Biotin-requiring enzyme LCG53_08395 PF02817 e3 binding domain LCG53_08400 PF00313 'Cold-shock' DNA-binding domain LCG53_08425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCG53_08430 PF00892 EamA-like transporter family LCG53_08435 PF01966 HD domain LCG53_08440 PF00849 RNA pseudouridylate synthase LCG53_08440 PF01479 S4 domain LCG53_08450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCG53_08455 PF12850 Calcineurin-like phosphoesterase superfamily domain LCG53_08470 PF13144 Chaperone for flagella basal body P-ring formation LCG53_08475 PF00072 Response regulator receiver domain LCG53_08475 PF01584 CheW-like domain LCG53_08480 PF03705 CheR methyltransferase, all-alpha domain LCG53_08480 PF01739 CheR methyltransferase, SAM binding domain LCG53_08485 PF00460 Flagella basal body rod protein LCG53_08490 PF00460 Flagella basal body rod protein LCG53_08490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCG53_08500 PF07559 Flagellar basal body protein FlaE LCG53_08500 PF00460 Flagella basal body rod protein LCG53_08500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCG53_08505 PF00460 Flagella basal body rod protein LCG53_08505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCG53_08510 PF00460 Flagella basal body rod protein LCG53_08510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCG53_08515 PF02107 Flagellar L-ring protein LCG53_08520 PF02119 Flagellar P-ring protein LCG53_08525 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LCG53_08525 PF10135 Rod binding protein LCG53_08530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCG53_08530 PF07196 Flagellin hook IN motif LCG53_08540 PF00571 CBS domain LCG53_08540 PF01769 Divalent cation transporter LCG53_08540 PF03448 MgtE intracellular N domain LCG53_08545 PF02541 Ppx/GppA phosphatase family LCG53_08550 PF13089 Polyphosphate kinase N-terminal domain LCG53_08550 PF02503 Polyphosphate kinase middle domain LCG53_08550 PF13090 Polyphosphate kinase C-terminal domain 2 LCG53_08550 PF17941 Polyphosphate kinase C-terminal domain 1 LCG53_08555 PF01842 ACT domain LCG53_08565 PF06490 Flagellar regulatory protein FleQ LCG53_08565 PF02954 Bacterial regulatory protein, Fis family LCG53_08565 PF00158 Sigma-54 interaction domain LCG53_08570 PF13188 PAS domain LCG53_08570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_08570 PF00512 His Kinase A (phospho-acceptor) domain LCG53_08575 PF02954 Bacterial regulatory protein, Fis family LCG53_08575 PF00072 Response regulator receiver domain LCG53_08575 PF00158 Sigma-54 interaction domain LCG53_08580 PF01784 NIF3 (NGG1p interacting factor 3) LCG53_08585 PF00551 Formyl transferase LCG53_08590 PF00586 AIR synthase related protein, N-terminal domain LCG53_08590 PF02769 AIR synthase related protein, C-terminal domain LCG53_08605 PF00308 Bacterial dnaA protein LCG53_08610 PF00463 Isocitrate lyase family LCG53_08615 PF01274 Malate synthase LCG53_08625 PF13358 DDE superfamily endonuclease LCG53_08625 PF13592 Winged helix-turn helix LCG53_08635 PF14437 MafB19-like deaminase LCG53_08640 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_08645 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_08650 PF00005 ABC transporter LCG53_08655 PF01895 PhoU domain LCG53_08660 PF00571 CBS domain LCG53_08660 PF03471 Transporter associated domain LCG53_08660 PF01595 Cyclin M transmembrane N-terminal domain LCG53_08670 PF02310 B12 binding domain LCG53_08670 PF02607 B12 binding domain LCG53_08670 PF02965 Vitamin B12 dependent methionine synthase, activation domain LCG53_08670 PF00809 Pterin binding enzyme LCG53_08670 PF02574 Homocysteine S-methyltransferase LCG53_08675 PF13520 Amino acid permease LCG53_08680 PF04116 Fatty acid hydroxylase superfamily LCG53_08685 PF00005 ABC transporter LCG53_08690 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_08695 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCG53_08700 PF00990 Diguanylate cyclase, GGDEF domain LCG53_08700 PF08448 PAS fold LCG53_08705 PF01272 Transcription elongation factor, GreA/GreB, C-term LCG53_08705 PF14760 Rnk N-terminus LCG53_08720 PF00245 Alkaline phosphatase LCG53_08725 PF00245 Alkaline phosphatase LCG53_08730 PF01926 50S ribosome-binding GTPase LCG53_08735 PF07690 Major Facilitator Superfamily LCG53_08740 PF00850 Histone deacetylase domain LCG53_08750 PF06733 DEAD_2 LCG53_08750 PF13307 Helicase C-terminal domain LCG53_08755 PF13609 Gram-negative porin LCG53_08765 PF00155 Aminotransferase class I and II LCG53_08770 PF05872 Bacterial protein of unknown function (DUF853) LCG53_08785 PF03772 Competence protein LCG53_08785 PF00753 Metallo-beta-lactamase superfamily LCG53_08790 PF00664 ABC transporter transmembrane region LCG53_08790 PF00005 ABC transporter LCG53_08795 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LCG53_08800 PF03966 Trm112p-like protein LCG53_08805 PF02348 Cytidylyltransferase LCG53_08810 PF00196 Bacterial regulatory proteins, luxR family LCG53_08810 PF00072 Response regulator receiver domain LCG53_08815 PF08459 UvrC Helix-hairpin-helix N-terminal LCG53_08815 PF01541 GIY-YIG catalytic domain LCG53_08815 PF02151 UvrB/uvrC motif LCG53_08820 PF01066 CDP-alcohol phosphatidyltransferase LCG53_08850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_08850 PF08447 PAS fold LCG53_08850 PF13426 PAS domain LCG53_08860 PF08240 Alcohol dehydrogenase GroES-like domain LCG53_08860 PF00107 Zinc-binding dehydrogenase LCG53_08865 PF16925 Tetracyclin repressor-like, C-terminal domain LCG53_08865 PF00440 Bacterial regulatory proteins, tetR family LCG53_08870 PF04226 Transglycosylase associated protein LCG53_08875 PF00149 Calcineurin-like phosphoesterase LCG53_08885 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LCG53_08890 PF01406 tRNA synthetases class I (C) catalytic domain LCG53_08890 PF09190 DALR domain LCG53_08915 PF00990 Diguanylate cyclase, GGDEF domain LCG53_08915 PF13185 GAF domain LCG53_08950 PF01169 Uncharacterized protein family UPF0016 LCG53_08955 PF01253 Translation initiation factor SUI1 LCG53_08965 PF07670 Nucleoside recognition LCG53_08965 PF07664 Ferrous iron transport protein B C terminus LCG53_08965 PF17910 FeoB cytosolic helical domain LCG53_08965 PF02421 Ferrous iron transport protein B LCG53_08975 PF00437 Type II/IV secretion system protein LCG53_08990 PF01032 FecCD transport family LCG53_08995 PF00005 ABC transporter LCG53_09000 PF00793 DAHP synthetase I family LCG53_09005 PF01219 Prokaryotic diacylglycerol kinase LCG53_09010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LCG53_09010 PF01842 ACT domain LCG53_09010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCG53_09015 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LCG53_09020 PF01812 5-formyltetrahydrofolate cyclo-ligase family LCG53_09030 PF05173 Dihydrodipicolinate reductase, C-terminus LCG53_09030 PF01113 Dihydrodipicolinate reductase, N-terminus LCG53_09035 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LCG53_09035 PF00117 Glutamine amidotransferase class-I LCG53_09040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LCG53_09040 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LCG53_09040 PF02142 MGS-like domain LCG53_09045 PF00682 HMGL-like LCG53_09045 PF08502 LeuA allosteric (dimerisation) domain LCG53_09050 PF00990 Diguanylate cyclase, GGDEF domain LCG53_09055 PF07759 Protein of unknown function (DUF1615) LCG53_09065 PF08378 Nuclease-related domain LCG53_09080 PF00271 Helicase conserved C-terminal domain LCG53_09080 PF00270 DEAD/DEAH box helicase LCG53_09090 PF14521 Lysine-specific metallo-endopeptidase LCG53_09115 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCG53_09120 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_09125 PF00005 ABC transporter LCG53_09130 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LCG53_09130 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCG53_09135 PF00310 Glutamine amidotransferases class-II LCG53_09135 PF04898 Glutamate synthase central domain LCG53_09135 PF01645 Conserved region in glutamate synthase LCG53_09135 PF01493 GXGXG motif LCG53_09140 PF04055 Radical SAM superfamily LCG53_09140 PF16199 Radical_SAM C-terminal domain LCG53_09145 PF03412 Peptidase C39 family LCG53_09145 PF00664 ABC transporter transmembrane region LCG53_09145 PF00005 ABC transporter LCG53_09185 PF00324 Amino acid permease LCG53_09195 PF03618 Kinase/pyrophosphorylase LCG53_09200 PF00391 PEP-utilising enzyme, mobile domain LCG53_09200 PF02896 PEP-utilising enzyme, TIM barrel domain LCG53_09200 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LCG53_09205 PF00005 ABC transporter LCG53_09220 PF03180 NLPA lipoprotein LCG53_09230 PF11890 Domain of unknown function (DUF3410) LCG53_09230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCG53_09230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LCG53_09235 PF01118 Semialdehyde dehydrogenase, NAD binding domain LCG53_09235 PF02774 Semialdehyde dehydrogenase, dimerisation domain LCG53_09245 PF01416 tRNA pseudouridine synthase LCG53_09250 PF01039 Carboxyl transferase domain LCG53_09250 PF17848 Acetyl-coA carboxylase zinc finger domain LCG53_09255 PF02875 Mur ligase family, glutamate ligase domain LCG53_09255 PF08245 Mur ligase middle domain LCG53_09260 PF05036 Sporulation related domain LCG53_09265 PF04358 DsrC like protein LCG53_09270 PF12805 FUSC-like inner membrane protein yccS LCG53_09275 PF01027 Inhibitor of apoptosis-promoting Bax1 LCG53_09285 PF07660 Secretin and TonB N terminus short domain LCG53_09285 PF00593 TonB dependent receptor LCG53_09285 PF07715 TonB-dependent Receptor Plug Domain LCG53_09300 PF04303 PrpF protein LCG53_09305 PF00694 Aconitase C-terminal domain LCG53_09305 PF00330 Aconitase family (aconitate hydratase) LCG53_09310 PF00285 Citrate synthase, C-terminal domain LCG53_09320 PF08447 PAS fold LCG53_09320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_09325 PF00563 EAL domain LCG53_09325 PF13426 PAS domain LCG53_09325 PF00990 Diguanylate cyclase, GGDEF domain LCG53_09330 PF00849 RNA pseudouridylate synthase LCG53_09340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCG53_09345 PF04209 homogentisate 1,2-dioxygenase LCG53_09355 PF02798 Glutathione S-transferase, N-terminal domain LCG53_09355 PF14497 Glutathione S-transferase, C-terminal domain LCG53_09370 PF00733 Asparagine synthase LCG53_09370 PF13537 Glutamine amidotransferase domain LCG53_09380 PF13344 Haloacid dehalogenase-like hydrolase LCG53_09385 PF00962 Adenosine/AMP deaminase LCG53_09390 PF08240 Alcohol dehydrogenase GroES-like domain LCG53_09390 PF00107 Zinc-binding dehydrogenase LCG53_09395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LCG53_09400 PF03741 Integral membrane protein TerC family LCG53_09400 PF03471 Transporter associated domain LCG53_09410 PF01565 FAD binding domain LCG53_09410 PF02913 FAD linked oxidases, C-terminal domain LCG53_09410 PF13183 4Fe-4S dicluster domain LCG53_09420 PF03061 Thioesterase superfamily LCG53_09425 PF03880 DbpA RNA binding domain LCG53_09425 PF00271 Helicase conserved C-terminal domain LCG53_09425 PF00270 DEAD/DEAH box helicase LCG53_09435 PF00563 EAL domain LCG53_09435 PF08447 PAS fold LCG53_09435 PF08448 PAS fold LCG53_09435 PF00990 Diguanylate cyclase, GGDEF domain LCG53_09440 PF03466 LysR substrate binding domain LCG53_09440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_09445 PF07690 Major Facilitator Superfamily LCG53_09450 PF03553 Na+/H+ antiporter family LCG53_09450 PF13726 Na+-H+ antiporter family LCG53_09455 PF00929 Exonuclease LCG53_09460 PF12729 Four helix bundle sensory module for signal transduction LCG53_09460 PF00672 HAMP domain LCG53_09460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_09465 PF18393 MotY N-terminal domain LCG53_09465 PF00691 OmpA family LCG53_09470 PF00459 Inositol monophosphatase family LCG53_09480 PF02798 Glutathione S-transferase, N-terminal domain LCG53_09480 PF00043 Glutathione S-transferase, C-terminal domain LCG53_09485 PF00043 Glutathione S-transferase, C-terminal domain LCG53_09485 PF02798 Glutathione S-transferase, N-terminal domain LCG53_09495 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_09500 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_09500 PF12911 N-terminal TM domain of oligopeptide transport permease C LCG53_09505 PF00005 ABC transporter LCG53_09505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCG53_09510 PF07690 Major Facilitator Superfamily LCG53_09520 PF05164 Cell division protein ZapA LCG53_09525 PF03695 Uncharacterised protein family (UPF0149) LCG53_09530 PF01494 FAD binding domain LCG53_09535 PF01494 FAD binding domain LCG53_09540 PF01571 Aminomethyltransferase folate-binding domain LCG53_09540 PF08669 Glycine cleavage T-protein C-terminal barrel domain LCG53_09545 PF01597 Glycine cleavage H-protein LCG53_09550 PF02347 Glycine cleavage system P-protein LCG53_09560 PF00668 Condensation domain LCG53_09560 PF08241 Methyltransferase domain LCG53_09560 PF00391 PEP-utilising enzyme, mobile domain LCG53_09560 PF00550 Phosphopantetheine attachment site LCG53_09560 PF00501 AMP-binding enzyme LCG53_09560 PF13193 AMP-binding enzyme C-terminal domain LCG53_09560 PF00975 Thioesterase domain LCG53_09570 PF07690 Major Facilitator Superfamily LCG53_09575 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCG53_09575 PF13192 Thioredoxin domain LCG53_09580 PF00578 AhpC/TSA family LCG53_09580 PF10417 C-terminal domain of 1-Cys peroxiredoxin LCG53_09585 PF00571 CBS domain LCG53_09590 PF02547 Queuosine biosynthesis protein LCG53_09595 PF01702 Queuine tRNA-ribosyltransferase LCG53_09600 PF02699 Preprotein translocase subunit LCG53_09605 PF07549 SecD/SecF GG Motif LCG53_09605 PF13721 SecD export protein N-terminal TM region LCG53_09605 PF02355 Protein export membrane protein LCG53_09610 PF07549 SecD/SecF GG Motif LCG53_09610 PF02355 Protein export membrane protein LCG53_09615 PF00581 Rhodanese-like domain LCG53_09620 PF07719 Tetratricopeptide repeat LCG53_09620 PF13181 Tetratricopeptide repeat LCG53_09625 PF01136 Peptidase family U32 LCG53_09630 PF01136 Peptidase family U32 LCG53_09635 PF02036 SCP-2 sterol transfer family LCG53_09640 PF00588 SpoU rRNA Methylase family LCG53_09645 PF02082 Transcriptional regulator LCG53_09650 PF00266 Aminotransferase class-V LCG53_09655 PF01592 NifU-like N terminal domain LCG53_09660 PF01521 Iron-sulphur cluster biosynthesis LCG53_09665 PF00226 DnaJ domain LCG53_09665 PF07743 HSCB C-terminal oligomerisation domain LCG53_09670 PF00012 Hsp70 protein LCG53_09675 PF00111 2Fe-2S iron-sulfur cluster binding domain LCG53_09680 PF12404 Peptidase LCG53_09680 PF00883 Cytosol aminopeptidase family, catalytic domain LCG53_09685 PF12404 Peptidase LCG53_09685 PF00883 Cytosol aminopeptidase family, catalytic domain LCG53_09690 PF00334 Nucleoside diphosphate kinase LCG53_09695 PF04055 Radical SAM superfamily LCG53_09705 PF13464 Domain of unknown function (DUF4115) LCG53_09710 PF04551 GcpE protein LCG53_09715 PF03129 Anticodon binding domain LCG53_09715 PF13393 Histidyl-tRNA synthetase LCG53_09720 PF09976 Tetratricopeptide repeat-like domain LCG53_09725 PF13360 PQQ-like domain LCG53_09730 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LCG53_09730 PF01926 50S ribosome-binding GTPase LCG53_09735 PF07191 zinc-ribbons LCG53_09740 PF01464 Transglycosylase SLT domain LCG53_09740 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCG53_09745 PF02769 AIR synthase related protein, C-terminal domain LCG53_09745 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LCG53_09745 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LCG53_09750 PF00361 Proton-conducting membrane transporter LCG53_09755 PF00361 Proton-conducting membrane transporter LCG53_09760 PF00361 Proton-conducting membrane transporter LCG53_09760 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LCG53_09765 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LCG53_09770 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LCG53_09775 PF12838 4Fe-4S dicluster domain LCG53_09780 PF00146 NADH dehydrogenase LCG53_09785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LCG53_09785 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LCG53_09785 PF00384 Molybdopterin oxidoreductase LCG53_09790 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LCG53_09790 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LCG53_09800 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LCG53_09800 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LCG53_09805 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LCG53_09810 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LCG53_09815 PF00691 OmpA family LCG53_09815 PF13677 Membrane MotB of proton-channel complex MotA/MotB LCG53_09820 PF01618 MotA/TolQ/ExbB proton channel family LCG53_09835 PF04536 TPM domain LCG53_09845 PF03411 Penicillin-insensitive murein endopeptidase LCG53_09855 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LCG53_09860 PF00248 Aldo/keto reductase family LCG53_09875 PF01212 Beta-eliminating lyase LCG53_09885 PF00072 Response regulator receiver domain LCG53_09885 PF00486 Transcriptional regulatory protein, C terminal LCG53_09890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_09890 PF03466 LysR substrate binding domain LCG53_09900 PF03707 Bacterial signalling protein N terminal repeat LCG53_09900 PF13188 PAS domain LCG53_09900 PF00563 EAL domain LCG53_09900 PF00990 Diguanylate cyclase, GGDEF domain LCG53_09905 PF03806 AbgT putative transporter family LCG53_09910 PF00881 Nitroreductase family LCG53_09925 PF07690 Major Facilitator Superfamily LCG53_09930 PF03466 LysR substrate binding domain LCG53_09930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_09935 PF00925 GTP cyclohydrolase II LCG53_09940 PF02224 Cytidylate kinase LCG53_09945 PF00575 S1 RNA binding domain LCG53_09950 PF00216 Bacterial DNA-binding protein LCG53_09960 PF18073 Rubredoxin metal binding domain LCG53_09965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LCG53_09980 PF06508 Queuosine biosynthesis protein QueC LCG53_09985 PF04055 Radical SAM superfamily LCG53_09990 PF12843 Putative quorum-sensing-regulated virulence factor LCG53_09995 PF01923 Cobalamin adenosyltransferase LCG53_10000 PF00816 H-NS histone family LCG53_10005 PF03553 Na+/H+ antiporter family LCG53_10010 PF00265 Thymidine kinase LCG53_10020 PF10722 Putative bacterial sensory transduction regulator LCG53_10030 PF00156 Phosphoribosyl transferase domain LCG53_10045 PF00455 DeoR C terminal sensor domain LCG53_10045 PF08220 DeoR-like helix-turn-helix domain LCG53_10050 PF00141 Peroxidase LCG53_10070 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LCG53_10070 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LCG53_10075 PF01053 Cys/Met metabolism PLP-dependent enzyme LCG53_10085 PF13460 NAD(P)H-binding LCG53_10090 PF03466 LysR substrate binding domain LCG53_10090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_10095 PF12833 Helix-turn-helix domain LCG53_10095 PF02311 AraC-like ligand binding domain LCG53_10100 PF12792 CSS motif domain associated with EAL LCG53_10100 PF00563 EAL domain LCG53_10105 PF17158 Membrane-associated sensor, integral membrane domain LCG53_10105 PF00990 Diguanylate cyclase, GGDEF domain LCG53_10110 PF00593 TonB dependent receptor LCG53_10110 PF07715 TonB-dependent Receptor Plug Domain LCG53_10120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_10120 PF03466 LysR substrate binding domain LCG53_10125 PF08267 Cobalamin-independent synthase, N-terminal domain LCG53_10125 PF01717 Cobalamin-independent synthase, Catalytic domain LCG53_10135 PF00571 CBS domain LCG53_10135 PF01743 Poly A polymerase head domain LCG53_10140 PF01266 FAD dependent oxidoreductase LCG53_10145 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LCG53_10155 PF00768 D-alanyl-D-alanine carboxypeptidase LCG53_10160 PF03918 Cytochrome C biogenesis protein LCG53_10165 PF08534 Redoxin LCG53_10170 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LCG53_10170 PF01578 Cytochrome C assembly protein LCG53_10175 PF03916 Polysulphide reductase, NrfD LCG53_10180 PF00037 4Fe-4S binding domain LCG53_10180 PF13247 4Fe-4S dicluster domain LCG53_10185 PF13435 Cytochrome c554 and c-prime LCG53_10185 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) LCG53_10190 PF02335 Cytochrome c552 LCG53_10205 PF13183 4Fe-4S dicluster domain LCG53_10205 PF02754 Cysteine-rich domain LCG53_10215 PF00890 FAD binding domain LCG53_10220 PF01266 FAD dependent oxidoreductase LCG53_10220 PF04324 BFD-like [2Fe-2S] binding domain LCG53_10225 PF02810 SEC-C motif LCG53_10230 PF17200 Single Cache domain 2 LCG53_10230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_10230 PF00672 HAMP domain LCG53_10235 PF01047 MarR family LCG53_10235 PF00480 ROK family LCG53_10240 PF17203 Single cache domain 3 LCG53_10240 PF00989 PAS fold LCG53_10240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_10240 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LCG53_10245 PF00072 Response regulator receiver domain LCG53_10250 PF01970 Tripartite tricarboxylate transporter TctA family LCG53_10260 PF03401 Tripartite tricarboxylate transporter family receptor LCG53_10265 PF01551 Peptidase family M23 LCG53_10265 PF10145 Phage-related minor tail protein LCG53_10265 PF01464 Transglycosylase SLT domain LCG53_10270 PF06826 Predicted Permease Membrane Region LCG53_10270 PF02080 TrkA-C domain LCG53_10280 PF04851 Type III restriction enzyme, res subunit LCG53_10280 PF00271 Helicase conserved C-terminal domain LCG53_10280 PF02151 UvrB/uvrC motif LCG53_10280 PF17757 UvrB interaction domain LCG53_10280 PF12344 Ultra-violet resistance protein B LCG53_10290 PF09335 SNARE associated Golgi protein LCG53_10295 PF02600 Disulfide bond formation protein DsbB LCG53_10300 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LCG53_10305 PF07840 FadR C-terminal domain LCG53_10305 PF00392 Bacterial regulatory proteins, gntR family LCG53_10310 PF04293 SpoVR like protein LCG53_10315 PF04285 Protein of unknown function (DUF444) LCG53_10320 PF08298 PrkA AAA domain LCG53_10320 PF06798 PrkA serine protein kinase C-terminal domain LCG53_10325 PF09382 RQC domain LCG53_10325 PF16124 RecQ zinc-binding LCG53_10325 PF00570 HRDC domain LCG53_10325 PF00271 Helicase conserved C-terminal domain LCG53_10325 PF00270 DEAD/DEAH box helicase LCG53_10330 PF00375 Sodium:dicarboxylate symporter family LCG53_10335 PF03222 Tryptophan/tyrosine permease family LCG53_10340 PF00293 NUDIX domain LCG53_10345 PF04715 Anthranilate synthase component I, N terminal region LCG53_10345 PF00425 chorismate binding enzyme LCG53_10365 PF00343 Carbohydrate phosphorylase LCG53_10375 PF00939 Sodium:sulfate symporter transmembrane region LCG53_10380 PF00085 Thioredoxin LCG53_10385 PF00672 HAMP domain LCG53_10385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_10385 PF00512 His Kinase A (phospho-acceptor) domain LCG53_10385 PF01627 Hpt domain LCG53_10385 PF00072 Response regulator receiver domain LCG53_10385 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LCG53_10390 PF00005 ABC transporter LCG53_10390 PF00664 ABC transporter transmembrane region LCG53_10395 PF00005 ABC transporter LCG53_10395 PF00664 ABC transporter transmembrane region LCG53_10420 PF01575 MaoC like domain LCG53_10425 PF00561 alpha/beta hydrolase fold LCG53_10425 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus LCG53_10445 PF08543 Phosphomethylpyrimidine kinase LCG53_10450 PF03992 Antibiotic biosynthesis monooxygenase LCG53_10455 PF13673 Acetyltransferase (GNAT) domain LCG53_10465 PF01928 CYTH domain LCG53_10480 PF00583 Acetyltransferase (GNAT) family LCG53_10485 PF00271 Helicase conserved C-terminal domain LCG53_10485 PF00270 DEAD/DEAH box helicase LCG53_10490 PF00255 Glutathione peroxidase LCG53_10500 PF07478 D-ala D-ala ligase C-terminus LCG53_10500 PF01820 D-ala D-ala ligase N-terminus LCG53_10505 PF03942 DTW domain LCG53_10520 PF01925 Sulfite exporter TauE/SafE LCG53_10525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_10525 PF03466 LysR substrate binding domain LCG53_10540 PF11398 Protein of unknown function (DUF2813) LCG53_10580 PF00883 Cytosol aminopeptidase family, catalytic domain LCG53_10580 PF02789 Cytosol aminopeptidase family, N-terminal domain LCG53_10585 PF13419 Haloacid dehalogenase-like hydrolase LCG53_10590 PF07687 Peptidase dimerisation domain LCG53_10590 PF01546 Peptidase family M20/M25/M40 LCG53_10595 PF00365 Phosphofructokinase LCG53_10600 PF00121 Triosephosphate isomerase LCG53_10605 PF02698 DUF218 domain LCG53_10610 PF13847 Methyltransferase domain LCG53_10615 PF17192 MukF middle domain LCG53_10615 PF17193 MukF C-terminal domain LCG53_10615 PF03882 MukF winged-helix domain LCG53_10620 PF04288 MukE-like family LCG53_10625 PF16330 MukB hinge domain LCG53_10625 PF04310 MukB N-terminal LCG53_10630 PF05036 Sporulation related domain LCG53_10630 PF03330 Lytic transglycolase LCG53_10650 PF03466 LysR substrate binding domain LCG53_10650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_10655 PF01048 Phosphorylase superfamily LCG53_10660 PF07670 Nucleoside recognition LCG53_10660 PF01773 Na+ dependent nucleoside transporter N-terminus LCG53_10660 PF07662 Na+ dependent nucleoside transporter C-terminus LCG53_10665 PF01791 DeoC/LacD family aldolase LCG53_10675 PF00300 Histidine phosphatase superfamily (branch 1) LCG53_10690 PF01810 LysE type translocator LCG53_10700 PF03831 PhnA domain LCG53_10700 PF08274 PhnA Zinc-Ribbon LCG53_10710 PF00704 Glycosyl hydrolases family 18 LCG53_10710 PF08329 Chitinase A, N-terminal domain LCG53_10735 PF01713 Smr domain LCG53_10740 PF05175 Methyltransferase small domain LCG53_10745 PF01264 Chorismate synthase LCG53_10755 PF00270 DEAD/DEAH box helicase LCG53_10755 PF00271 Helicase conserved C-terminal domain LCG53_10770 PF03222 Tryptophan/tyrosine permease family LCG53_10775 PF00356 Bacterial regulatory proteins, lacI family LCG53_10775 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LCG53_10780 PF00381 PTS HPr component phosphorylation site LCG53_10780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCG53_10785 PF00294 pfkB family carbohydrate kinase LCG53_10790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LCG53_10790 PF02378 Phosphotransferase system, EIIC LCG53_10795 PF06945 Protein of unknown function (DUF1289) LCG53_10800 PF06725 3D domain LCG53_10800 PF03562 MltA specific insert domain LCG53_10805 PF00111 2Fe-2S iron-sulfur cluster binding domain LCG53_10810 PF00268 Ribonucleotide reductase, small chain LCG53_10815 PF03477 ATP cone domain LCG53_10815 PF02867 Ribonucleotide reductase, barrel domain LCG53_10815 PF00317 Ribonucleotide reductase, all-alpha domain LCG53_10820 PF13419 Haloacid dehalogenase-like hydrolase LCG53_10830 PF03989 DNA gyrase C-terminal domain, beta-propeller LCG53_10830 PF00521 DNA gyrase/topoisomerase IV, subunit A LCG53_10900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LCG53_10900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LCG53_10900 PF02824 TGS domain LCG53_10900 PF03129 Anticodon binding domain LCG53_10905 PF00707 Translation initiation factor IF-3, C-terminal domain LCG53_10905 PF05198 Translation initiation factor IF-3, N-terminal domain LCG53_10910 PF01632 Ribosomal protein L35 LCG53_10915 PF00453 Ribosomal protein L20 LCG53_10920 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LCG53_10920 PF01409 tRNA synthetases class II core domain (F) LCG53_10925 PF03483 B3/4 domain LCG53_10925 PF03484 tRNA synthetase B5 domain LCG53_10925 PF03147 Ferredoxin-fold anticodon binding domain LCG53_10925 PF01588 Putative tRNA binding domain LCG53_10925 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LCG53_10930 PF00216 Bacterial DNA-binding protein LCG53_10935 PF00512 His Kinase A (phospho-acceptor) domain LCG53_10935 PF09456 RcsC Alpha-Beta-Loop (ABL) LCG53_10935 PF00072 Response regulator receiver domain LCG53_10935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_10950 PF02146 Sir2 family LCG53_10960 PF00563 EAL domain LCG53_10960 PF00990 Diguanylate cyclase, GGDEF domain LCG53_10960 PF03707 Bacterial signalling protein N terminal repeat LCG53_10965 PF00356 Bacterial regulatory proteins, lacI family LCG53_10970 PF00294 pfkB family carbohydrate kinase LCG53_10975 PF13407 Periplasmic binding protein domain LCG53_10980 PF02653 Branched-chain amino acid transport system / permease component LCG53_10985 PF00005 ABC transporter LCG53_10990 PF05025 RbsD / FucU transport protein family LCG53_10995 PF00043 Glutathione S-transferase, C-terminal domain LCG53_10995 PF02798 Glutathione S-transferase, N-terminal domain LCG53_11010 PF01171 PP-loop family LCG53_11015 PF00582 Universal stress protein family LCG53_11020 PF00027 Cyclic nucleotide-binding domain LCG53_11020 PF13545 Crp-like helix-turn-helix domain LCG53_11035 PF00403 Heavy-metal-associated domain LCG53_11045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LCG53_11045 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LCG53_11060 PF00115 Cytochrome C and Quinol oxidase polypeptide I LCG53_11070 PF13185 GAF domain LCG53_11075 PF04352 ProQ/FINO family LCG53_11075 PF17516 ProQ C-terminal domain LCG53_11080 PF03572 Peptidase family S41 LCG53_11080 PF00595 PDZ domain LCG53_11080 PF11818 C-terminal domain of tail specific protease (DUF3340) LCG53_11080 PF17804 Tail specific protease N-terminal domain LCG53_11085 PF11940 Domain of unknown function (DUF3458) Ig-like fold LCG53_11085 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LCG53_11085 PF01433 Peptidase family M1 domain LCG53_11095 PF05088 Bacterial NAD-glutamate dehydrogenase LCG53_11100 PF01180 Dihydroorotate dehydrogenase LCG53_11105 PF07126 Cell-division protein ZapC LCG53_11110 PF02926 THUMP domain LCG53_11110 PF01170 Putative RNA methylase family UPF0020 LCG53_11110 PF10672 S-adenosylmethionine-dependent methyltransferase LCG53_11120 PF12848 ABC transporter LCG53_11120 PF16326 ABC transporter C-terminal domain LCG53_11120 PF00005 ABC transporter LCG53_11130 PF04957 Ribosome modulation factor LCG53_11135 PF07977 FabA-like domain LCG53_11140 PF05362 Lon protease (S16) C-terminal proteolytic domain LCG53_11140 PF13654 AAA domain LCG53_11150 PF07130 YebG protein LCG53_11160 PF04403 Paraquat-inducible protein A LCG53_11165 PF02470 MlaD protein LCG53_11170 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LCG53_11170 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF LCG53_11170 PF01189 16S rRNA methyltransferase RsmB/F LCG53_11205 PF00589 Phage integrase family LCG53_11210 PF01026 TatD related DNase LCG53_11215 PF09115 DNA polymerase III, delta subunit, C terminal LCG53_11220 PF02223 Thymidylate kinase LCG53_11225 PF02618 YceG-like family LCG53_11230 PF01063 Amino-transferase class IV LCG53_11235 PF00109 Beta-ketoacyl synthase, N-terminal domain LCG53_11235 PF02801 Beta-ketoacyl synthase, C-terminal domain LCG53_11240 PF00550 Phosphopantetheine attachment site LCG53_11250 PF00698 Acyl transferase domain LCG53_11255 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LCG53_11255 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LCG53_11260 PF02504 Fatty acid synthesis protein LCG53_11265 PF01783 Ribosomal L32p protein family LCG53_11270 PF02620 Large ribosomal RNA subunit accumulation protein YceD LCG53_11280 PF02545 Maf-like protein LCG53_11285 PF00849 RNA pseudouridylate synthase LCG53_11285 PF01479 S4 domain LCG53_11290 PF12111 Polyribonucleotide phosphorylase C terminal LCG53_11290 PF10150 Ribonuclease E/G family LCG53_11290 PF00575 S1 RNA binding domain LCG53_11295 PF01384 Phosphate transporter family LCG53_11300 PF00692 dUTPase LCG53_11305 PF00485 Phosphoribulokinase / Uridine kinase family LCG53_11310 PF10609 NUBPL iron-transfer P-loop NTPase LCG53_11315 PF01588 Putative tRNA binding domain LCG53_11315 PF09334 tRNA synthetases class I (M) LCG53_11315 PF08264 Anticodon-binding domain of tRNA LCG53_11320 PF00043 Glutathione S-transferase, C-terminal domain LCG53_11320 PF02798 Glutathione S-transferase, N-terminal domain LCG53_11325 PF00708 Acylphosphatase LCG53_11330 PF00672 HAMP domain LCG53_11330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_11330 PF12729 Four helix bundle sensory module for signal transduction LCG53_11335 PF10672 S-adenosylmethionine-dependent methyltransferase LCG53_11335 PF17785 PUA-like domain LCG53_11350 PF02769 AIR synthase related protein, C-terminal domain LCG53_11350 PF00586 AIR synthase related protein, N-terminal domain LCG53_11360 PF00753 Metallo-beta-lactamase superfamily LCG53_11365 PF00072 Response regulator receiver domain LCG53_11370 PF00072 Response regulator receiver domain LCG53_11370 PF01627 Hpt domain LCG53_11370 PF00512 His Kinase A (phospho-acceptor) domain LCG53_11370 PF00672 HAMP domain LCG53_11370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_11370 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LCG53_11375 PF01386 Ribosomal L25p family LCG53_11385 PF00270 DEAD/DEAH box helicase LCG53_11385 PF11898 Domain of unknown function (DUF3418) LCG53_11385 PF04408 Helicase associated domain (HA2) LCG53_11385 PF00271 Helicase conserved C-terminal domain LCG53_11385 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LCG53_11390 PF01743 Poly A polymerase head domain LCG53_11390 PF01368 DHH family LCG53_11390 PF00571 CBS domain LCG53_11390 PF02272 DHHA1 domain LCG53_11395 PF00196 Bacterial regulatory proteins, luxR family LCG53_11395 PF00072 Response regulator receiver domain LCG53_11400 PF07670 Nucleoside recognition LCG53_11405 PF02678 Pirin LCG53_11405 PF05726 Pirin C-terminal cupin domain LCG53_11410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_11410 PF03466 LysR substrate binding domain LCG53_11415 PF02575 YbaB/EbfC DNA-binding family LCG53_11420 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LCG53_11420 PF12170 DNA polymerase III tau subunit V interacting with alpha LCG53_11420 PF12169 DNA polymerase III subunits gamma and tau domain III LCG53_11425 PF00156 Phosphoribosyl transferase domain LCG53_11430 PF04304 Protein of unknown function (DUF454) LCG53_11435 PF01207 Dihydrouridine synthase (Dus) LCG53_11445 PF00892 EamA-like transporter family LCG53_11455 PF01612 3'-5' exonuclease LCG53_11455 PF00570 HRDC domain LCG53_11460 PF00501 AMP-binding enzyme LCG53_11460 PF13193 AMP-binding enzyme C-terminal domain LCG53_11465 PF00561 alpha/beta hydrolase fold LCG53_11475 PF00814 Glycoprotease family LCG53_11480 PF13307 Helicase C-terminal domain LCG53_11480 PF04851 Type III restriction enzyme, res subunit LCG53_11490 PF01634 ATP phosphoribosyltransferase LCG53_11490 PF08029 HisG, C-terminal domain LCG53_11495 PF00815 Histidinol dehydrogenase LCG53_11500 PF00155 Aminotransferase class I and II LCG53_11505 PF00475 Imidazoleglycerol-phosphate dehydratase LCG53_11505 PF08645 Polynucleotide kinase 3 phosphatase LCG53_11510 PF00117 Glutamine amidotransferase class-I LCG53_11515 PF00977 Histidine biosynthesis protein LCG53_11520 PF00072 Response regulator receiver domain LCG53_11530 PF00072 Response regulator receiver domain LCG53_11530 PF01627 Hpt domain LCG53_11530 PF00512 His Kinase A (phospho-acceptor) domain LCG53_11530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_11535 PF00977 Histidine biosynthesis protein LCG53_11540 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LCG53_11540 PF01502 Phosphoribosyl-AMP cyclohydrolase LCG53_11550 PF13280 WYL domain LCG53_11550 PF08279 HTH domain LCG53_11555 PF00501 AMP-binding enzyme LCG53_11555 PF13193 AMP-binding enzyme C-terminal domain LCG53_11560 PF05433 Glycine zipper 2TM domain LCG53_11575 PF01032 FecCD transport family LCG53_11580 PF00005 ABC transporter LCG53_11585 PF07690 Major Facilitator Superfamily LCG53_11600 PF07152 YaeQ protein LCG53_11610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LCG53_11610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LCG53_11610 PF00378 Enoyl-CoA hydratase/isomerase LCG53_11615 PF02803 Thiolase, C-terminal domain LCG53_11615 PF00108 Thiolase, N-terminal domain LCG53_11620 PF07726 ATPase family associated with various cellular activities (AAA) LCG53_11620 PF17863 AAA lid domain LCG53_11625 PF01882 Protein of unknown function DUF58 LCG53_11650 PF04542 Sigma-70 region 2 LCG53_11650 PF08281 Sigma-70, region 4 LCG53_11660 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LCG53_11665 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LCG53_11670 PF00563 EAL domain LCG53_11670 PF08668 HDOD domain LCG53_11675 PF02803 Thiolase, C-terminal domain LCG53_11675 PF00108 Thiolase, N-terminal domain LCG53_11680 PF00376 MerR family regulatory protein LCG53_11680 PF09278 MerR, DNA binding LCG53_11685 PF00375 Sodium:dicarboxylate symporter family LCG53_11690 PF06865 Pyrimidine/purine nucleoside phosphorylase LCG53_11695 PF03313 Serine dehydratase alpha chain LCG53_11695 PF03315 Serine dehydratase beta chain LCG53_11700 PF03313 Serine dehydratase alpha chain LCG53_11700 PF03315 Serine dehydratase beta chain LCG53_11705 PF13406 Transglycosylase SLT domain LCG53_11710 PF05166 YcgL domain LCG53_11715 PF03775 Septum formation inhibitor MinC, C-terminal domain LCG53_11715 PF05209 Septum formation inhibitor MinC, N-terminal domain LCG53_11720 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LCG53_11725 PF03776 Septum formation topological specificity factor MinE LCG53_11730 PF04269 Protein of unknown function, DUF440 LCG53_11735 PF00912 Transglycosylase LCG53_11740 PF04269 Protein of unknown function, DUF440 LCG53_11750 PF17783 CvfB-like winged helix domain LCG53_11750 PF13509 S1 domain LCG53_11775 PF02525 Flavodoxin-like fold LCG53_11780 PF00892 EamA-like transporter family LCG53_11785 PF02222 ATP-grasp domain LCG53_11785 PF01370 NAD dependent epimerase/dehydratase family LCG53_11790 PF13419 Haloacid dehalogenase-like hydrolase LCG53_11805 PF00677 Lumazine binding domain LCG53_11810 PF06786 Uncharacterised protein family (UPF0253) LCG53_11815 PF01554 MatE LCG53_11845 PF03104 DNA polymerase family B, exonuclease domain LCG53_11845 PF00136 DNA polymerase family B LCG53_11850 PF05726 Pirin C-terminal cupin domain LCG53_11850 PF02678 Pirin LCG53_11860 PF03279 Bacterial lipid A biosynthesis acyltransferase LCG53_11865 PF03279 Bacterial lipid A biosynthesis acyltransferase LCG53_11875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_11875 PF03466 LysR substrate binding domain LCG53_11880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LCG53_11880 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LCG53_11885 PF01261 Xylose isomerase-like TIM barrel LCG53_11890 PF00990 Diguanylate cyclase, GGDEF domain LCG53_11895 PF00933 Glycosyl hydrolase family 3 N terminal domain LCG53_11905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_11905 PF03466 LysR substrate binding domain LCG53_11915 PF00232 Glycosyl hydrolase family 1 LCG53_11920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_11920 PF03466 LysR substrate binding domain LCG53_11925 PF00990 Diguanylate cyclase, GGDEF domain LCG53_11925 PF00072 Response regulator receiver domain LCG53_11930 PF00384 Molybdopterin oxidoreductase LCG53_11935 PF02634 FdhD/NarQ family LCG53_11950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_11950 PF03466 LysR substrate binding domain LCG53_11955 PF13407 Periplasmic binding protein domain LCG53_11960 PF00005 ABC transporter LCG53_11965 PF02653 Branched-chain amino acid transport system / permease component LCG53_11970 PF02653 Branched-chain amino acid transport system / permease component LCG53_11975 PF12706 Beta-lactamase superfamily domain LCG53_11990 PF01738 Dienelactone hydrolase family LCG53_11995 PF12146 Serine aminopeptidase, S33 LCG53_12000 PF03466 LysR substrate binding domain LCG53_12000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_12020 PF00239 Resolvase, N terminal domain LCG53_12020 PF02796 Helix-turn-helix domain of resolvase LCG53_12045 PF01925 Sulfite exporter TauE/SafE LCG53_12050 PF13520 Amino acid permease LCG53_12060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LCG53_12060 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LCG53_12065 PF00378 Enoyl-CoA hydratase/isomerase LCG53_12070 PF00378 Enoyl-CoA hydratase/isomerase LCG53_12075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCG53_12075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCG53_12075 PF02770 Acyl-CoA dehydrogenase, middle domain LCG53_12080 PF00171 Aldehyde dehydrogenase family LCG53_12085 PF02770 Acyl-CoA dehydrogenase, middle domain LCG53_12085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCG53_12085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCG53_12090 PF01039 Carboxyl transferase domain LCG53_12095 PF00378 Enoyl-CoA hydratase/isomerase LCG53_12100 PF02785 Biotin carboxylase C-terminal domain LCG53_12100 PF00289 Biotin carboxylase, N-terminal domain LCG53_12100 PF00364 Biotin-requiring enzyme LCG53_12100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LCG53_12105 PF00682 HMGL-like LCG53_12110 PF00376 MerR family regulatory protein LCG53_12110 PF09278 MerR, DNA binding LCG53_12120 PF01184 GPR1/FUN34/yaaH family LCG53_12125 PF06167 Glucose-regulated metallo-peptidase M90 LCG53_12135 PF01235 Sodium:alanine symporter family LCG53_12140 PF00378 Enoyl-CoA hydratase/isomerase LCG53_12155 PF04341 Protein of unknown function, DUF485 LCG53_12160 PF00474 Sodium:solute symporter family LCG53_12165 PF00005 ABC transporter LCG53_12165 PF12848 ABC transporter LCG53_12170 PF13145 PPIC-type PPIASE domain LCG53_12175 PF00216 Bacterial DNA-binding protein LCG53_12180 PF00004 ATPase family associated with various cellular activities (AAA) LCG53_12180 PF02190 ATP-dependent protease La (LON) substrate-binding domain LCG53_12180 PF05362 Lon protease (S16) C-terminal proteolytic domain LCG53_12185 PF06689 ClpX C4-type zinc finger LCG53_12185 PF10431 C-terminal, D2-small domain, of ClpB protein LCG53_12185 PF07724 AAA domain (Cdc48 subfamily) LCG53_12190 PF00574 Clp protease LCG53_12195 PF05698 Bacterial trigger factor protein (TF) C-terminus LCG53_12195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCG53_12195 PF05697 Bacterial trigger factor protein (TF) LCG53_12210 PF02687 FtsX-like permease family LCG53_12210 PF12704 MacB-like periplasmic core domain LCG53_12215 PF00005 ABC transporter LCG53_12220 PF02687 FtsX-like permease family LCG53_12220 PF12704 MacB-like periplasmic core domain LCG53_12230 PF03461 TRCF domain LCG53_12230 PF17757 UvrB interaction domain LCG53_12230 PF02559 CarD-like/TRCF domain LCG53_12230 PF00270 DEAD/DEAH box helicase LCG53_12230 PF00271 Helicase conserved C-terminal domain LCG53_12235 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LCG53_12245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCG53_12260 PF00300 Histidine phosphatase superfamily (branch 1) LCG53_12265 PF16187 Middle or third domain of peptidase_M16 LCG53_12265 PF00675 Insulinase (Peptidase family M16) LCG53_12265 PF05193 Peptidase M16 inactive domain LCG53_12270 PF05724 Thiopurine S-methyltransferase (TPMT) LCG53_12280 PF01047 MarR family LCG53_12300 PF02805 Metal binding domain of Ada LCG53_12300 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LCG53_12300 PF12833 Helix-turn-helix domain LCG53_12300 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LCG53_12320 PF00376 MerR family regulatory protein LCG53_12320 PF09278 MerR, DNA binding LCG53_12325 PF02411 MerT mercuric transport protein LCG53_12330 PF00403 Heavy-metal-associated domain LCG53_12335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCG53_12335 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCG53_12335 PF00403 Heavy-metal-associated domain LCG53_12340 PF12324 Helix-turn-helix domain of alkylmercury lyase LCG53_12340 PF03243 Alkylmercury lyase LCG53_12345 PF13411 MerR HTH family regulatory protein LCG53_12350 PF05052 MerE protein LCG53_12390 PF17273 Family of unknown function (DUF5338) LCG53_12420 PF13356 Arm DNA-binding domain LCG53_12420 PF00589 Phage integrase family LCG53_12425 PF00117 Glutamine amidotransferase class-I LCG53_12425 PF00958 GMP synthase C terminal domain LCG53_12425 PF02540 NAD synthase LCG53_12430 PF00571 CBS domain LCG53_12430 PF00478 IMP dehydrogenase / GMP reductase domain LCG53_12440 PF00128 Alpha amylase, catalytic domain LCG53_12440 PF01373 Glycosyl hydrolase family 14 LCG53_12440 PF03423 Carbohydrate binding domain (family 25) LCG53_12450 PF02601 Exonuclease VII, large subunit LCG53_12450 PF13742 OB-fold nucleic acid binding domain LCG53_12455 PF04055 Radical SAM superfamily LCG53_12460 PF00691 OmpA family LCG53_12465 PF03707 Bacterial signalling protein N terminal repeat LCG53_12465 PF00563 EAL domain LCG53_12465 PF00990 Diguanylate cyclase, GGDEF domain LCG53_12470 PF13689 YfiR/HmsC-like LCG53_12475 PF18024 Helix-turn-helix domain LCG53_12475 PF00158 Sigma-54 interaction domain LCG53_12480 PF01329 Pterin 4 alpha carbinolamine dehydratase LCG53_12485 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LCG53_12490 PF05128 Domain of unknown function (DUF697) LCG53_12495 PF04317 YcjX-like family, DUF463 LCG53_12505 PF06667 Phage shock protein B LCG53_12510 PF04012 PspA/IM30 family LCG53_12515 PF02954 Bacterial regulatory protein, Fis family LCG53_12515 PF00158 Sigma-54 interaction domain LCG53_12520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCG53_12525 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_12530 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_12530 PF12911 N-terminal TM domain of oligopeptide transport permease C LCG53_12535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCG53_12535 PF00005 ABC transporter LCG53_12540 PF00005 ABC transporter LCG53_12545 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LCG53_12550 PF00356 Bacterial regulatory proteins, lacI family LCG53_12555 PF00367 phosphotransferase system, EIIB LCG53_12555 PF02378 Phosphotransferase system, EIIC LCG53_12560 PF00232 Glycosyl hydrolase family 1 LCG53_12565 PF00156 Phosphoribosyl transferase domain LCG53_12570 PF02674 Colicin V production protein LCG53_12575 PF02403 Seryl-tRNA synthetase N-terminal domain LCG53_12575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LCG53_12580 PF00004 ATPase family associated with various cellular activities (AAA) LCG53_12580 PF16193 AAA C-terminal domain LCG53_12580 PF12002 MgsA AAA+ ATPase C terminal LCG53_12585 PF03548 Outer membrane lipoprotein carrier protein LolA LCG53_12590 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LCG53_12590 PF17854 FtsK alpha domain LCG53_12590 PF09397 Ftsk gamma domain LCG53_12590 PF01580 FtsK/SpoIIIE family LCG53_12595 PF01037 Lrp/AsnC ligand binding domain LCG53_12600 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LCG53_12600 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LCG53_12605 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCG53_12610 PF05230 MASE2 domain LCG53_12610 PF00990 Diguanylate cyclase, GGDEF domain LCG53_12615 PF05433 Glycine zipper 2TM domain LCG53_12620 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LCG53_12625 PF04377 Arginine-tRNA-protein transferase, C terminus LCG53_12625 PF04376 Arginine-tRNA-protein transferase, N terminus LCG53_12630 PF01176 Translation initiation factor 1A / IF-1 LCG53_12635 PF00004 ATPase family associated with various cellular activities (AAA) LCG53_12635 PF07724 AAA domain (Cdc48 subfamily) LCG53_12635 PF17871 AAA lid domain LCG53_12635 PF02861 Clp amino terminal domain, pathogenicity island component LCG53_12635 PF10431 C-terminal, D2-small domain, of ClpB protein LCG53_12640 PF02617 ATP-dependent Clp protease adaptor protein ClpS LCG53_12645 PF00313 'Cold-shock' DNA-binding domain LCG53_12650 PF01118 Semialdehyde dehydrogenase, NAD binding domain LCG53_12650 PF02774 Semialdehyde dehydrogenase, dimerisation domain LCG53_12655 PF00893 Small Multidrug Resistance protein LCG53_12665 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LCG53_12665 PF18381 YcaO cyclodehydratase C-terminal domain LCG53_12670 PF01226 Formate/nitrite transporter LCG53_12675 PF01228 Glycine radical LCG53_12675 PF02901 Pyruvate formate lyase-like LCG53_12685 PF00202 Aminotransferase class-III LCG53_12690 PF00266 Aminotransferase class-V LCG53_12695 PF00392 Bacterial regulatory proteins, gntR family LCG53_12695 PF07702 UTRA domain LCG53_12705 PF00005 ABC transporter LCG53_12710 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_12715 PF01266 FAD dependent oxidoreductase LCG53_12720 PF03692 Putative zinc- or iron-chelating domain LCG53_12730 PF02629 CoA binding domain LCG53_12730 PF00549 CoA-ligase LCG53_12735 PF08442 ATP-grasp domain LCG53_12735 PF00549 CoA-ligase LCG53_12740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LCG53_12740 PF00364 Biotin-requiring enzyme LCG53_12740 PF02817 e3 binding domain LCG53_12745 PF16078 2-oxoglutarate dehydrogenase N-terminus LCG53_12745 PF00676 Dehydrogenase E1 component LCG53_12745 PF16870 2-oxoglutarate dehydrogenase C-terminal LCG53_12745 PF02779 Transketolase, pyrimidine binding domain LCG53_12750 PF13085 2Fe-2S iron-sulfur cluster binding domain LCG53_12755 PF00890 FAD binding domain LCG53_12755 PF02910 Fumarate reductase flavoprotein C-term LCG53_12760 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LCG53_12765 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LCG53_12770 PF00285 Citrate synthase, C-terminal domain LCG53_12785 PF00109 Beta-ketoacyl synthase, N-terminal domain LCG53_12785 PF02801 Beta-ketoacyl synthase, C-terminal domain LCG53_12790 PF01266 FAD dependent oxidoreductase LCG53_12790 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LCG53_12800 PF03606 C4-dicarboxylate anaerobic carrier LCG53_12815 PF01863 Protein of unknown function DUF45 LCG53_12830 PF01197 Ribosomal protein L31 LCG53_12835 PF00444 Ribosomal protein L36 LCG53_12840 PF02311 AraC-like ligand binding domain LCG53_12840 PF12833 Helix-turn-helix domain LCG53_12845 PF02653 Branched-chain amino acid transport system / permease component LCG53_12850 PF00005 ABC transporter LCG53_12855 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LCG53_12860 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LCG53_12865 PF00596 Class II Aldolase and Adducin N-terminal domain LCG53_12870 PF11762 L-arabinose isomerase C-terminal domain LCG53_12870 PF02610 L-arabinose isomerase LCG53_12875 PF03466 LysR substrate binding domain LCG53_12875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_12880 PF00155 Aminotransferase class I and II LCG53_12885 PF00795 Carbon-nitrogen hydrolase LCG53_12890 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCG53_12900 PF03706 Lysylphosphatidylglycerol synthase TM region LCG53_12900 PF09924 Uncharacterised conserved protein (DUF2156) LCG53_12905 PF00149 Calcineurin-like phosphoesterase LCG53_12915 PF02887 Pyruvate kinase, alpha/beta domain LCG53_12915 PF00224 Pyruvate kinase, barrel domain LCG53_12920 PF07745 Glycosyl hydrolase family 53 LCG53_12925 PF02378 Phosphotransferase system, EIIC LCG53_12925 PF00367 phosphotransferase system, EIIB LCG53_12930 PF08532 Beta-galactosidase trimerisation domain LCG53_12930 PF08533 Beta-galactosidase C-terminal domain LCG53_12930 PF02449 Beta-galactosidase LCG53_12935 PF07745 Glycosyl hydrolase family 53 LCG53_12940 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_12945 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_12950 PF13416 Bacterial extracellular solute-binding protein LCG53_12955 PF00005 ABC transporter LCG53_12955 PF17912 MalK OB fold domain LCG53_12960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_12960 PF00672 HAMP domain LCG53_12960 PF02743 Cache domain LCG53_12970 PF07745 Glycosyl hydrolase family 53 LCG53_12975 PF02264 LamB porin LCG53_12980 PF00356 Bacterial regulatory proteins, lacI family LCG53_12985 PF16363 GDP-mannose 4,6 dehydratase LCG53_12990 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LCG53_12990 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LCG53_12995 PF10509 Galactokinase galactose-binding signature LCG53_12995 PF08544 GHMP kinases C terminal LCG53_12995 PF00288 GHMP kinases N terminal domain LCG53_13025 PF18766 SWI2/SNF2 ATPase LCG53_13025 PF11867 Domain of unknown function (DUF3387) LCG53_13025 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LCG53_13030 PF13195 Protein of unknown function (DUF4011) LCG53_13030 PF13086 AAA domain LCG53_13030 PF13195 Protein of unknown function (DUF4011) LCG53_13030 PF13087 AAA domain LCG53_13030 PF13086 AAA domain LCG53_13030 PF13087 AAA domain LCG53_13050 PF02384 N-6 DNA Methylase LCG53_13050 PF12161 HsdM N-terminal domain LCG53_13060 PF02146 Sir2 family LCG53_13080 PF08411 Exonuclease C-terminal LCG53_13080 PF00929 Exonuclease LCG53_13095 PF03788 LrgA family LCG53_13100 PF04172 LrgB-like family LCG53_13105 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LCG53_13105 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LCG53_13110 PF00501 AMP-binding enzyme LCG53_13115 PF08891 YfcL protein LCG53_13125 PF03741 Integral membrane protein TerC family LCG53_13130 PF00793 DAHP synthetase I family LCG53_13135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LCG53_13140 PF00266 Aminotransferase class-V LCG53_13145 PF01012 Electron transfer flavoprotein domain LCG53_13145 PF00766 Electron transfer flavoprotein FAD-binding domain LCG53_13150 PF01012 Electron transfer flavoprotein domain LCG53_13160 PF01544 CorA-like Mg2+ transporter protein LCG53_13165 PF11143 Protein of unknown function (DUF2919) LCG53_13180 PF07715 TonB-dependent Receptor Plug Domain LCG53_13180 PF00593 TonB dependent receptor LCG53_13185 PF01032 FecCD transport family LCG53_13190 PF01032 FecCD transport family LCG53_13195 PF00005 ABC transporter LCG53_13200 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LCG53_13200 PF01648 4'-phosphopantetheinyl transferase superfamily LCG53_13205 PF01497 Periplasmic binding protein LCG53_13210 PF00501 AMP-binding enzyme LCG53_13210 PF13193 AMP-binding enzyme C-terminal domain LCG53_13210 PF00668 Condensation domain LCG53_13210 PF16197 Ketoacyl-synthetase C-terminal extension LCG53_13210 PF14765 Polyketide synthase dehydratase LCG53_13210 PF00550 Phosphopantetheine attachment site LCG53_13210 PF08659 KR domain LCG53_13210 PF02801 Beta-ketoacyl synthase, C-terminal domain LCG53_13210 PF00109 Beta-ketoacyl synthase, N-terminal domain LCG53_13215 PF00550 Phosphopantetheine attachment site LCG53_13215 PF07993 Male sterility protein LCG53_13215 PF00668 Condensation domain LCG53_13215 PF13193 AMP-binding enzyme C-terminal domain LCG53_13215 PF00501 AMP-binding enzyme LCG53_13225 PF00550 Phosphopantetheine attachment site LCG53_13225 PF00975 Thioesterase domain LCG53_13225 PF00501 AMP-binding enzyme LCG53_13225 PF13193 AMP-binding enzyme C-terminal domain LCG53_13225 PF00668 Condensation domain LCG53_13230 PF00857 Isochorismatase family LCG53_13230 PF00550 Phosphopantetheine attachment site LCG53_13235 PF00501 AMP-binding enzyme LCG53_13235 PF13193 AMP-binding enzyme C-terminal domain LCG53_13240 PF00425 chorismate binding enzyme LCG53_13245 PF07273 Protein of unknown function (DUF1439) LCG53_13255 PF00483 Nucleotidyl transferase LCG53_13260 PF00563 EAL domain LCG53_13260 PF00990 Diguanylate cyclase, GGDEF domain LCG53_13260 PF03707 Bacterial signalling protein N terminal repeat LCG53_13275 PF00672 HAMP domain LCG53_13275 PF17200 Single Cache domain 2 LCG53_13275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_13280 PF00294 pfkB family carbohydrate kinase LCG53_13285 PF01124 MAPEG family LCG53_13290 PF00762 Ferrochelatase LCG53_13295 PF05191 Adenylate kinase, active site lid LCG53_13300 PF00183 Hsp90 protein LCG53_13300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_13305 PF13662 Toprim domain LCG53_13305 PF02132 RecR protein LCG53_13310 PF01300 Telomere recombination LCG53_13310 PF17788 HypF Kae1-like domain LCG53_13310 PF00708 Acylphosphatase LCG53_13310 PF07503 HypF finger LCG53_13315 PF01455 HupF/HypC family LCG53_13320 PF01924 Hydrogenase formation hypA family LCG53_13325 PF02769 AIR synthase related protein, C-terminal domain LCG53_13325 PF00586 AIR synthase related protein, N-terminal domain LCG53_13330 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LCG53_13340 PF02492 CobW/HypB/UreG, nucleotide-binding domain LCG53_13345 PF00005 ABC transporter LCG53_13350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCG53_13350 PF00005 ABC transporter LCG53_13355 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_13355 PF12911 N-terminal TM domain of oligopeptide transport permease C LCG53_13360 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_13365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCG53_13370 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE LCG53_13375 PF01750 Hydrogenase maturation protease LCG53_13380 PF00374 Nickel-dependent hydrogenase LCG53_13385 PF03916 Polysulphide reductase, NrfD LCG53_13390 PF13247 4Fe-4S dicluster domain LCG53_13395 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LCG53_13395 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LCG53_13400 PF00842 Alanine racemase, C-terminal domain LCG53_13400 PF01168 Alanine racemase, N-terminal domain LCG53_13410 PF00916 Sulfate permease family LCG53_13410 PF01740 STAS domain LCG53_13430 PF14403 Circularly permuted ATP-grasp type 2 LCG53_13435 PF04168 A predicted alpha-helical domain with a conserved ER motif. LCG53_13435 PF14403 Circularly permuted ATP-grasp type 2 LCG53_13465 PF03239 Iron permease FTR1 family LCG53_13470 PF01593 Flavin containing amine oxidoreductase LCG53_13490 PF07690 Major Facilitator Superfamily LCG53_13500 PF03600 Citrate transporter LCG53_13510 PF00005 ABC transporter LCG53_13515 PF02687 FtsX-like permease family LCG53_13515 PF12704 MacB-like periplasmic core domain LCG53_13535 PF02913 FAD linked oxidases, C-terminal domain LCG53_13535 PF01565 FAD binding domain LCG53_13540 PF02589 LUD domain LCG53_13545 PF11870 Domain of unknown function (DUF3390) LCG53_13545 PF02589 LUD domain LCG53_13545 PF13183 4Fe-4S dicluster domain LCG53_13550 PF02754 Cysteine-rich domain LCG53_13555 PF02652 L-lactate permease LCG53_13560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_13560 PF03466 LysR substrate binding domain LCG53_13585 PF01625 Peptide methionine sulfoxide reductase LCG53_13590 PF00696 Amino acid kinase family LCG53_13590 PF00583 Acetyltransferase (GNAT) family LCG53_13595 PF00696 Amino acid kinase family LCG53_13595 PF01842 ACT domain LCG53_13605 PF00884 Sulfatase LCG53_13610 PF01906 Putative heavy-metal-binding LCG53_13620 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCG53_13625 PF05728 Uncharacterised protein family (UPF0227) LCG53_13630 PF08439 Oligopeptidase F LCG53_13630 PF01432 Peptidase family M3 LCG53_13635 PF08439 Oligopeptidase F LCG53_13635 PF01432 Peptidase family M3 LCG53_13640 PF05661 Protein of unknown function (DUF808) LCG53_13650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_13650 PF13426 PAS domain LCG53_13650 PF08447 PAS fold LCG53_13655 PF02355 Protein export membrane protein LCG53_13655 PF07549 SecD/SecF GG Motif LCG53_13660 PF07549 SecD/SecF GG Motif LCG53_13660 PF13721 SecD export protein N-terminal TM region LCG53_13660 PF02355 Protein export membrane protein LCG53_13695 PF01230 HIT domain LCG53_13700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_13700 PF00672 HAMP domain LCG53_13710 PF01979 Amidohydrolase family LCG53_13730 PF00375 Sodium:dicarboxylate symporter family LCG53_13740 PF00842 Alanine racemase, C-terminal domain LCG53_13740 PF01168 Alanine racemase, N-terminal domain LCG53_13745 PF03741 Integral membrane protein TerC family LCG53_13750 PF00005 ABC transporter LCG53_13750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCG53_13755 PF00005 ABC transporter LCG53_13755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCG53_13760 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_13760 PF12911 N-terminal TM domain of oligopeptide transport permease C LCG53_13765 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_13770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCG53_13775 PF01914 MarC family integral membrane protein LCG53_13780 PF00171 Aldehyde dehydrogenase family LCG53_13780 PF00465 Iron-containing alcohol dehydrogenase LCG53_13785 PF00072 Response regulator receiver domain LCG53_13790 PF06580 Histidine kinase LCG53_13790 PF07694 5TMR of 5TMR-LYT LCG53_13795 PF00072 Response regulator receiver domain LCG53_13795 PF04397 LytTr DNA-binding domain LCG53_13800 PF02554 Carbon starvation protein CstA LCG53_13805 PF12794 Mechanosensitive ion channel inner membrane domain 1 LCG53_13805 PF12795 Mechanosensitive ion channel porin domain LCG53_13805 PF00924 Mechanosensitive ion channel LCG53_13810 PF11742 Protein of unknown function (DUF3302) LCG53_13815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCG53_13815 PF00529 HlyD membrane-fusion protein of T1SS LCG53_13820 PF00271 Helicase conserved C-terminal domain LCG53_13820 PF04851 Type III restriction enzyme, res subunit LCG53_13825 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LCG53_13830 PF00462 Glutaredoxin LCG53_13840 PF00155 Aminotransferase class I and II LCG53_13845 PF03606 C4-dicarboxylate anaerobic carrier LCG53_13850 PF12241 Trans-2-enoyl-CoA reductase catalytic region LCG53_13850 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LCG53_13850 PF07055 Enoyl reductase FAD binding domain LCG53_13875 PF00892 EamA-like transporter family LCG53_13880 PF02508 Rnf-Nqr subunit, membrane protein LCG53_13885 PF04060 Putative Fe-S cluster LCG53_13890 PF12838 4Fe-4S dicluster domain LCG53_13890 PF13375 RnfC Barrel sandwich hybrid domain LCG53_13890 PF10531 SLBB domain LCG53_13890 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LCG53_13895 PF03116 NQR2, RnfD, RnfE family LCG53_13900 PF04205 FMN-binding domain LCG53_13905 PF02508 Rnf-Nqr subunit, membrane protein LCG53_13910 PF00633 Helix-hairpin-helix motif LCG53_13910 PF10576 Iron-sulfur binding domain of endonuclease III LCG53_13910 PF00730 HhH-GPD superfamily base excision DNA repair protein LCG53_13915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCG53_13920 PF12729 Four helix bundle sensory module for signal transduction LCG53_13920 PF00672 HAMP domain LCG53_13920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_13925 PF02535 ZIP Zinc transporter LCG53_13940 PF01048 Phosphorylase superfamily LCG53_13950 PF01497 Periplasmic binding protein LCG53_13955 PF02719 Polysaccharide biosynthesis protein LCG53_13960 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LCG53_13970 PF02348 Cytidylyltransferase LCG53_13975 PF00202 Aminotransferase class-III LCG53_13990 PF03102 NeuB family LCG53_13990 PF08666 SAF domain LCG53_14010 PF02561 Flagellar protein FliS LCG53_14015 PF07195 Flagellar hook-associated protein 2 C-terminus LCG53_14015 PF07196 Flagellin hook IN motif LCG53_14015 PF02465 Flagellar hook-associated protein 2 N-terminus LCG53_14025 PF00700 Bacterial flagellin C-terminal helical region LCG53_14025 PF07196 Flagellin hook IN motif LCG53_14025 PF00669 Bacterial flagellin N-terminal helical region LCG53_14030 PF00669 Bacterial flagellin N-terminal helical region LCG53_14030 PF00700 Bacterial flagellin C-terminal helical region LCG53_14030 PF07196 Flagellin hook IN motif LCG53_14035 PF00700 Bacterial flagellin C-terminal helical region LCG53_14035 PF07196 Flagellin hook IN motif LCG53_14035 PF00669 Bacterial flagellin N-terminal helical region LCG53_14040 PF03458 UPF0126 domain LCG53_14050 PF02926 THUMP domain LCG53_14050 PF02568 Thiamine biosynthesis protein (ThiI) LCG53_14060 PF06832 Penicillin-Binding Protein C-terminus Family LCG53_14060 PF00912 Transglycosylase LCG53_14060 PF00905 Penicillin binding protein transpeptidase domain LCG53_14065 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LCG53_14065 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LCG53_14065 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LCG53_14065 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LCG53_14065 PF00207 Alpha-2-macroglobulin family LCG53_14065 PF07678 A-macroglobulin TED domain LCG53_14065 PF17962 Bacterial macroglobulin domain 6 LCG53_14065 PF07703 Alpha-2-macroglobulin bait region domain LCG53_14065 PF01835 MG2 domain LCG53_14070 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCG53_14070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCG53_14075 PF03707 Bacterial signalling protein N terminal repeat LCG53_14075 PF00563 EAL domain LCG53_14075 PF00990 Diguanylate cyclase, GGDEF domain LCG53_14080 PF04055 Radical SAM superfamily LCG53_14090 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_14095 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_14100 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCG53_14105 PF00005 ABC transporter LCG53_14110 PF03956 Lysine exporter LysO LCG53_14115 PF01979 Amidohydrolase family LCG53_14120 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCG53_14130 PF04336 Acyl carrier protein phosphodiesterase LCG53_14145 PF03960 ArsC family LCG53_14150 PF00578 AhpC/TSA family LCG53_14155 PF01435 Peptidase family M48 LCG53_14155 PF13181 Tetratricopeptide repeat LCG53_14160 PF01206 Sulfurtransferase TusA LCG53_14165 PF01594 AI-2E family transporter LCG53_14175 PF00561 alpha/beta hydrolase fold LCG53_14180 PF03976 Polyphosphate kinase 2 (PPK2) LCG53_14185 PF08402 TOBE domain LCG53_14185 PF00005 ABC transporter LCG53_14190 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_14195 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_14195 PF14785 Maltose transport system permease protein MalF P2 domain LCG53_14200 PF01547 Bacterial extracellular solute-binding protein LCG53_14205 PF04245 37-kD nucleoid-associated bacterial protein LCG53_14210 PF07208 Protein of unknown function (DUF1414) LCG53_14215 PF11893 Domain of unknown function (DUF3413) LCG53_14215 PF00884 Sulfatase LCG53_14220 PF07715 TonB-dependent Receptor Plug Domain LCG53_14220 PF00593 TonB dependent receptor LCG53_14225 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LCG53_14225 PF00326 Prolyl oligopeptidase family LCG53_14245 PF03974 Ecotin LCG53_14250 PF04219 Protein of unknown function, DUF LCG53_14255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_14255 PF03466 LysR substrate binding domain LCG53_14260 PF01817 Chorismate mutase type II LCG53_14260 PF02153 Prephenate dehydrogenase LCG53_14265 PF00793 DAHP synthetase I family LCG53_14270 PF03009 Glycerophosphoryl diester phosphodiesterase family LCG53_14275 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LCG53_14275 PF01266 FAD dependent oxidoreductase LCG53_14280 PF08220 DeoR-like helix-turn-helix domain LCG53_14280 PF00455 DeoR C terminal sensor domain LCG53_14285 PF07690 Major Facilitator Superfamily LCG53_14290 PF00230 Major intrinsic protein LCG53_14295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LCG53_14295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LCG53_14300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_14300 PF03466 LysR substrate binding domain LCG53_14320 PF00248 Aldo/keto reductase family LCG53_14325 PF07690 Major Facilitator Superfamily LCG53_14345 PF02322 Cytochrome bd terminal oxidase subunit II LCG53_14350 PF01654 Cytochrome bd terminal oxidase subunit I LCG53_14355 PF00392 Bacterial regulatory proteins, gntR family LCG53_14355 PF00155 Aminotransferase class I and II LCG53_14365 PF04391 Protein of unknown function (DUF533) LCG53_14375 PF10689 Protein of unknown function (DUF2496) LCG53_14385 PF03466 LysR substrate binding domain LCG53_14385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_14395 PF07690 Major Facilitator Superfamily LCG53_14400 PF00849 RNA pseudouridylate synthase LCG53_14400 PF01479 S4 domain LCG53_14405 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LCG53_14405 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LCG53_14415 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCG53_14425 PF00271 Helicase conserved C-terminal domain LCG53_14425 PF04851 Type III restriction enzyme, res subunit LCG53_14430 PF00300 Histidine phosphatase superfamily (branch 1) LCG53_14435 PF00563 EAL domain LCG53_14435 PF00990 Diguanylate cyclase, GGDEF domain LCG53_14435 PF03707 Bacterial signalling protein N terminal repeat LCG53_14450 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LCG53_14450 PF17944 Arginine decarboxylase C-terminal helical extension LCG53_14450 PF17810 Arginine decarboxylase helical bundle domain LCG53_14455 PF07687 Peptidase dimerisation domain LCG53_14455 PF01546 Peptidase family M20/M25/M40 LCG53_14470 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LCG53_14470 PF05221 S-adenosyl-L-homocysteine hydrolase LCG53_14480 PF04264 YceI-like domain LCG53_14485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_14485 PF03466 LysR substrate binding domain LCG53_14495 PF01268 Formate--tetrahydrofolate ligase LCG53_14500 PF17200 Single Cache domain 2 LCG53_14500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_14500 PF00672 HAMP domain LCG53_14505 PF01227 GTP cyclohydrolase I LCG53_14510 PF03453 MoeA N-terminal region (domain I and II) LCG53_14510 PF00994 Probable molybdopterin binding domain LCG53_14510 PF03454 MoeA C-terminal region (domain IV) LCG53_14515 PF00899 ThiF family LCG53_14525 PF06406 StbA protein LCG53_14530 PF12697 Alpha/beta hydrolase family LCG53_14535 PF03459 TOBE domain LCG53_14535 PF00005 ABC transporter LCG53_14540 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_14550 PF02391 MoaE protein LCG53_14555 PF02597 ThiS family LCG53_14560 PF01967 MoaC family LCG53_14565 PF00994 Probable molybdopterin binding domain LCG53_14570 PF03264 NapC/NirT cytochrome c family, N-terminal region LCG53_14575 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LCG53_14580 PF12801 4Fe-4S binding domain LCG53_14580 PF13237 4Fe-4S dicluster domain LCG53_14585 PF12838 4Fe-4S dicluster domain LCG53_14585 PF12800 4Fe-4S binding domain LCG53_14590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LCG53_14590 PF10518 TAT (twin-arginine translocation) pathway signal sequence LCG53_14590 PF01568 Molydopterin dinucleotide binding domain LCG53_14590 PF00384 Molybdopterin oxidoreductase LCG53_14600 PF00037 4Fe-4S binding domain LCG53_14600 PF13187 4Fe-4S dicluster domain LCG53_14600 PF12800 4Fe-4S binding domain LCG53_14605 PF06463 Molybdenum Cofactor Synthesis C LCG53_14605 PF04055 Radical SAM superfamily LCG53_14610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_14610 PF07730 Histidine kinase LCG53_14610 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LCG53_14610 PF00672 HAMP domain LCG53_14615 PF00196 Bacterial regulatory proteins, luxR family LCG53_14615 PF00072 Response regulator receiver domain LCG53_14630 PF00072 Response regulator receiver domain LCG53_14630 PF09456 RcsC Alpha-Beta-Loop (ABL) LCG53_14630 PF00512 His Kinase A (phospho-acceptor) domain LCG53_14630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_14640 PF01933 Uncharacterised protein family UPF0052 LCG53_14650 PF13230 Glutamine amidotransferases class-II LCG53_14655 PF13580 SIS domain LCG53_14660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCG53_14660 PF02770 Acyl-CoA dehydrogenase, middle domain LCG53_14660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCG53_14660 PF09317 Domain of unknown function (DUF1974) LCG53_14665 PF11849 Domain of unknown function (DUF3369) LCG53_14675 PF00929 Exonuclease LCG53_14680 PF00075 RNase H LCG53_14685 PF08241 Methyltransferase domain LCG53_14690 PF00753 Metallo-beta-lactamase superfamily LCG53_14690 PF16123 Hydroxyacylglutathione hydrolase C-terminus LCG53_14700 PF01476 LysM domain LCG53_14700 PF01464 Transglycosylase SLT domain LCG53_14705 PF03372 Endonuclease/Exonuclease/phosphatase family LCG53_14715 PF03061 Thioesterase superfamily LCG53_14725 PF00356 Bacterial regulatory proteins, lacI family LCG53_14730 PF14718 Soluble lytic murein transglycosylase L domain LCG53_14730 PF01464 Transglycosylase SLT domain LCG53_14735 PF03707 Bacterial signalling protein N terminal repeat LCG53_14735 PF00990 Diguanylate cyclase, GGDEF domain LCG53_14735 PF00563 EAL domain LCG53_14740 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LCG53_14765 PF04357 TamB, inner membrane protein subunit of TAM complex LCG53_14770 PF01103 Surface antigen LCG53_14770 PF07244 Surface antigen variable number repeat LCG53_14770 PF17243 POTRA domain TamA domain 1 LCG53_14790 PF02627 Carboxymuconolactone decarboxylase family LCG53_14795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCG53_14795 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCG53_14795 PF00403 Heavy-metal-associated domain LCG53_14800 PF13416 Bacterial extracellular solute-binding protein LCG53_14810 PF00005 ABC transporter LCG53_14815 PF01066 CDP-alcohol phosphatidyltransferase LCG53_14820 PF13406 Transglycosylase SLT domain LCG53_14825 PF01047 MarR family LCG53_14835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LCG53_14835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LCG53_14835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LCG53_14835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LCG53_14840 PF03925 SeqA protein C-terminal domain LCG53_14840 PF17206 SeqA protein N-terminal domain LCG53_14845 PF12697 Alpha/beta hydrolase family LCG53_14855 PF01402 Ribbon-helix-helix protein, copG family LCG53_14860 PF00258 Flavodoxin LCG53_14870 PF01475 Ferric uptake regulator family LCG53_14875 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LCG53_14875 PF00749 tRNA synthetases class I (E and Q), catalytic domain LCG53_14880 PF00728 Glycosyl hydrolase family 20, catalytic domain LCG53_14880 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain LCG53_14880 PF03173 Putative carbohydrate binding domain LCG53_14880 PF02838 Glycosyl hydrolase family 20, domain 2 LCG53_14885 PF02378 Phosphotransferase system, EIIC LCG53_14885 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LCG53_14885 PF00367 phosphotransferase system, EIIB LCG53_14890 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LCG53_14895 PF01979 Amidohydrolase family LCG53_14900 PF00480 ROK family LCG53_14900 PF01047 MarR family LCG53_14905 PF08019 Phosphoethanolamine transferase EptA/EptB LCG53_14905 PF00884 Sulfatase LCG53_14910 PF01709 Transcriptional regulator LCG53_14915 PF01336 OB-fold nucleic acid binding domain LCG53_14915 PF02938 GAD domain LCG53_14915 PF00152 tRNA synthetases class II (D, K and N) LCG53_14920 PF01904 Protein of unknown function DUF72 LCG53_14925 PF13649 Methyltransferase domain LCG53_14930 PF08003 Protein of unknown function (DUF1698) LCG53_14950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_14950 PF03466 LysR substrate binding domain LCG53_14955 PF00877 NlpC/P60 family LCG53_14965 PF00171 Aldehyde dehydrogenase family LCG53_14970 PF08359 YsiA-like protein, C-terminal region LCG53_14970 PF00440 Bacterial regulatory proteins, tetR family LCG53_14980 PF00465 Iron-containing alcohol dehydrogenase LCG53_14985 PF00291 Pyridoxal-phosphate dependent enzyme LCG53_15005 PF01554 MatE LCG53_15015 PF04325 Protein of unknown function (DUF465) LCG53_15035 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LCG53_15035 PF10371 Domain of unknown function LCG53_15035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LCG53_15035 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LCG53_15035 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LCG53_15040 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LCG53_15040 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LCG53_15040 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCG53_15045 PF03476 MOSC N-terminal beta barrel domain LCG53_15045 PF00111 2Fe-2S iron-sulfur cluster binding domain LCG53_15045 PF03473 MOSC domain LCG53_15045 PF00111 2Fe-2S iron-sulfur cluster binding domain LCG53_15045 PF03473 MOSC domain LCG53_15045 PF03476 MOSC N-terminal beta barrel domain LCG53_15050 PF01435 Peptidase family M48 LCG53_15060 PF12697 Alpha/beta hydrolase family LCG53_15060 PF08241 Methyltransferase domain LCG53_15065 PF00155 Aminotransferase class I and II LCG53_15070 PF06968 Biotin and Thiamin Synthesis associated domain LCG53_15070 PF04055 Radical SAM superfamily LCG53_15075 PF00202 Aminotransferase class-III LCG53_15090 PF01336 OB-fold nucleic acid binding domain LCG53_15090 PF00152 tRNA synthetases class II (D, K and N) LCG53_15095 PF03605 Anaerobic c4-dicarboxylate membrane transporter LCG53_15105 PF01546 Peptidase family M20/M25/M40 LCG53_15105 PF07687 Peptidase dimerisation domain LCG53_15110 PF03606 C4-dicarboxylate anaerobic carrier LCG53_15120 PF03960 ArsC family LCG53_15125 PF07687 Peptidase dimerisation domain LCG53_15125 PF01546 Peptidase family M20/M25/M40 LCG53_15130 PF02557 D-alanyl-D-alanine carboxypeptidase LCG53_15140 PF00999 Sodium/hydrogen exchanger family LCG53_15140 PF02080 TrkA-C domain LCG53_15140 PF03471 Transporter associated domain LCG53_15150 PF01810 LysE type translocator LCG53_15155 PF00672 HAMP domain LCG53_15155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_15160 PF07509 Protein of unknown function (DUF1523) LCG53_15180 PF01156 Inosine-uridine preferring nucleoside hydrolase LCG53_15185 PF00849 RNA pseudouridylate synthase LCG53_15190 PF01048 Phosphorylase superfamily LCG53_15195 PF00465 Iron-containing alcohol dehydrogenase LCG53_15200 PF04355 SmpA / OmlA family LCG53_15205 PF13460 NAD(P)H-binding LCG53_15210 PF03658 RnfH family Ubiquitin LCG53_15215 PF03364 Polyketide cyclase / dehydrase and lipid transport LCG53_15220 PF01668 SmpB protein LCG53_15230 PF07729 FCD domain LCG53_15230 PF00392 Bacterial regulatory proteins, gntR family LCG53_15235 PF01081 KDPG and KHG aldolase LCG53_15250 PF13508 Acetyltransferase (GNAT) domain LCG53_15270 PF01546 Peptidase family M20/M25/M40 LCG53_15275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_15275 PF03466 LysR substrate binding domain LCG53_15280 PF01243 Pyridoxamine 5'-phosphate oxidase LCG53_15280 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LCG53_15295 PF01189 16S rRNA methyltransferase RsmB/F LCG53_15295 PF01029 NusB family LCG53_15300 PF00462 Glutaredoxin LCG53_15305 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LCG53_15305 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LCG53_15310 PF04333 MlaA lipoprotein LCG53_15320 PF03918 Cytochrome C biogenesis protein LCG53_15325 PF08534 Redoxin LCG53_15330 PF01578 Cytochrome C assembly protein LCG53_15330 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LCG53_15335 PF03100 CcmE LCG53_15340 PF04995 Heme exporter protein D (CcmD) LCG53_15345 PF01578 Cytochrome C assembly protein LCG53_15350 PF03379 CcmB protein LCG53_15355 PF00005 ABC transporter LCG53_15365 PF01584 CheW-like domain LCG53_15375 PF13614 AAA domain LCG53_15380 PF13677 Membrane MotB of proton-channel complex MotA/MotB LCG53_15380 PF00691 OmpA family LCG53_15385 PF01618 MotA/TolQ/ExbB proton channel family LCG53_15390 PF01339 CheB methylesterase LCG53_15390 PF00072 Response regulator receiver domain LCG53_15395 PF00072 Response regulator receiver domain LCG53_15395 PF01584 CheW-like domain LCG53_15395 PF02895 Signal transducing histidine kinase, homodimeric domain LCG53_15395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_15395 PF01627 Hpt domain LCG53_15400 PF04344 Chemotaxis phosphatase, CheZ LCG53_15405 PF00072 Response regulator receiver domain LCG53_15410 PF04545 Sigma-70, region 4 LCG53_15410 PF04539 Sigma-70 region 3 LCG53_15410 PF04542 Sigma-70 region 2 LCG53_15415 PF10609 NUBPL iron-transfer P-loop NTPase LCG53_15420 PF00448 SRP54-type protein, GTPase domain LCG53_15425 PF00771 FHIPEP family LCG53_15430 PF01312 FlhB HrpN YscU SpaS Family LCG53_15435 PF01311 Bacterial export proteins, family 1 LCG53_15440 PF01313 Bacterial export proteins, family 3 LCG53_15445 PF00813 FliP family LCG53_15450 PF04347 Flagellar biosynthesis protein, FliO LCG53_15455 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LCG53_15460 PF02154 Flagellar motor switch protein FliM LCG53_15460 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LCG53_15480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCG53_15480 PF18269 T3SS EscN ATPase C-terminal domain LCG53_15490 PF14842 FliG N-terminal domain LCG53_15490 PF14841 FliG middle domain LCG53_15490 PF01706 FliG C-terminal domain LCG53_15495 PF01514 Secretory protein of YscJ/FliF family LCG53_15495 PF08345 Flagellar M-ring protein C-terminal LCG53_15500 PF02049 Flagellar hook-basal body complex protein FliE LCG53_15515 PF03960 ArsC family LCG53_15520 PF01758 Sodium Bile acid symporter family LCG53_15525 PF01022 Bacterial regulatory protein, arsR family LCG53_15530 PF00072 Response regulator receiver domain LCG53_15535 PF18693 TRAM domain LCG53_15535 PF00919 Uncharacterized protein family UPF0004 LCG53_15535 PF04055 Radical SAM superfamily LCG53_15540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCG53_15545 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_15550 PF12911 N-terminal TM domain of oligopeptide transport permease C LCG53_15550 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_15555 PF00005 ABC transporter LCG53_15555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCG53_15560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCG53_15560 PF00005 ABC transporter LCG53_15570 PF01869 BadF/BadG/BcrA/BcrD ATPase family LCG53_15575 PF02838 Glycosyl hydrolase family 20, domain 2 LCG53_15575 PF00728 Glycosyl hydrolase family 20, catalytic domain LCG53_15580 PF08447 PAS fold LCG53_15580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_15595 PF01751 Toprim domain LCG53_15595 PF01396 Topoisomerase DNA binding C4 zinc finger LCG53_15595 PF08272 Topoisomerase I zinc-ribbon-like LCG53_15595 PF01131 DNA topoisomerase LCG53_15600 PF04996 Succinylarginine dihydrolase LCG53_15605 PF08496 Peptidase family S49 N-terminal LCG53_15605 PF01343 Peptidase family S49 LCG53_15610 PF00106 short chain dehydrogenase LCG53_15615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_15615 PF03466 LysR substrate binding domain LCG53_15620 PF07690 Major Facilitator Superfamily LCG53_15625 PF00155 Aminotransferase class I and II LCG53_15635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_15635 PF03466 LysR substrate binding domain LCG53_15640 PF00709 Adenylosuccinate synthetase LCG53_15645 PF01161 Phosphatidylethanolamine-binding protein LCG53_15655 PF01204 Trehalase LCG53_15660 PF00579 tRNA synthetases class I (W and Y) LCG53_15665 PF08525 Opacity-associated protein A N-terminal motif LCG53_15665 PF01551 Peptidase family M23 LCG53_15665 PF01476 LysM domain LCG53_15670 PF03702 Anhydro-N-acetylmuramic acid kinase LCG53_15685 PF01042 Endoribonuclease L-PSP LCG53_15695 PF02779 Transketolase, pyrimidine binding domain LCG53_15695 PF02780 Transketolase, C-terminal domain LCG53_15695 PF00456 Transketolase, thiamine diphosphate binding domain LCG53_15700 PF02773 S-adenosylmethionine synthetase, C-terminal domain LCG53_15700 PF02772 S-adenosylmethionine synthetase, central domain LCG53_15700 PF00438 S-adenosylmethionine synthetase, N-terminal domain LCG53_15705 PF17283 SprT-like zinc ribbon domain LCG53_15705 PF10263 SprT-like family LCG53_15710 PF04231 Endonuclease I LCG53_15715 PF04452 RNA methyltransferase LCG53_15720 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LCG53_15720 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LCG53_15725 PF02622 Uncharacterized ACR, COG1678 LCG53_15730 PF03652 Holliday junction resolvase LCG53_15735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_15735 PF03466 LysR substrate binding domain LCG53_15740 PF07690 Major Facilitator Superfamily LCG53_15745 PF00144 Beta-lactamase LCG53_15750 PF01235 Sodium:alanine symporter family LCG53_15755 PF00923 Transaldolase/Fructose-6-phosphate aldolase LCG53_15770 PF03167 Uracil DNA glycosylase superfamily LCG53_15775 PF01228 Glycine radical LCG53_15780 PF00375 Sodium:dicarboxylate symporter family LCG53_15785 PF00793 DAHP synthetase I family LCG53_15790 PF13369 Transglutaminase-like superfamily LCG53_15800 PF17827 PrmC N-terminal domain LCG53_15800 PF13847 Methyltransferase domain LCG53_15805 PF03462 PCRF domain LCG53_15805 PF00472 RF-1 domain LCG53_15810 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LCG53_15810 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LCG53_15810 PF01488 Shikimate / quinate 5-dehydrogenase LCG53_15815 PF03550 Outer membrane lipoprotein LolB LCG53_15820 PF08544 GHMP kinases C terminal LCG53_15820 PF00288 GHMP kinases N terminal domain LCG53_15830 PF14572 Phosphoribosyl synthetase-associated domain LCG53_15830 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LCG53_15835 PF01195 Peptidyl-tRNA hydrolase LCG53_15840 PF01926 50S ribosome-binding GTPase LCG53_15840 PF06071 Protein of unknown function (DUF933) LCG53_15885 PF02080 TrkA-C domain LCG53_15885 PF03600 Citrate transporter LCG53_15890 PF04266 ASCH domain LCG53_15895 PF07859 alpha/beta hydrolase fold LCG53_15910 PF13419 Haloacid dehalogenase-like hydrolase LCG53_15955 PF00171 Aldehyde dehydrogenase family LCG53_15960 PF04958 Arginine N-succinyltransferase beta subunit LCG53_15965 PF00202 Aminotransferase class-III LCG53_15970 PF00117 Glutamine amidotransferase class-I LCG53_15980 PF00579 tRNA synthetases class I (W and Y) LCG53_15985 PF13419 Haloacid dehalogenase-like hydrolase LCG53_15990 PF00834 Ribulose-phosphate 3 epimerase family LCG53_15995 PF02086 D12 class N6 adenine-specific DNA methyltransferase LCG53_16000 PF05036 Sporulation related domain LCG53_16005 PF01761 3-dehydroquinate synthase LCG53_16010 PF01202 Shikimate kinase LCG53_16015 PF11741 AMIN domain LCG53_16015 PF00263 Bacterial type II and III secretion system protein LCG53_16015 PF03958 Bacterial type II/III secretion system short domain LCG53_16015 PF07660 Secretin and TonB N terminus short domain LCG53_16025 PF04350 Pilus assembly protein, PilO LCG53_16035 PF11104 Type IV pilus assembly protein PilM; LCG53_16040 PF17092 Penicillin-binding protein OB-like domain LCG53_16040 PF00912 Transglycosylase LCG53_16040 PF00905 Penicillin binding protein transpeptidase domain LCG53_16045 PF03466 LysR substrate binding domain LCG53_16045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_16060 PF03466 LysR substrate binding domain LCG53_16060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_16070 PF01551 Peptidase family M23 LCG53_16070 PF01476 LysM domain LCG53_16070 PF08525 Opacity-associated protein A N-terminal motif LCG53_16080 PF00924 Mechanosensitive ion channel LCG53_16080 PF12794 Mechanosensitive ion channel inner membrane domain 1 LCG53_16080 PF12795 Mechanosensitive ion channel porin domain LCG53_16085 PF03009 Glycerophosphoryl diester phosphodiesterase family LCG53_16090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_16090 PF00672 HAMP domain LCG53_16090 PF02743 Cache domain LCG53_16095 PF02910 Fumarate reductase flavoprotein C-term LCG53_16095 PF00890 FAD binding domain LCG53_16100 PF13085 2Fe-2S iron-sulfur cluster binding domain LCG53_16100 PF13183 4Fe-4S dicluster domain LCG53_16105 PF02300 Fumarate reductase subunit C LCG53_16110 PF02313 Fumarate reductase subunit D LCG53_16125 PF06224 Winged helix DNA-binding domain LCG53_16130 PF13847 Methyltransferase domain LCG53_16140 PF00501 AMP-binding enzyme LCG53_16150 PF00106 short chain dehydrogenase LCG53_16160 PF00072 Response regulator receiver domain LCG53_16160 PF00486 Transcriptional regulatory protein, C terminal LCG53_16165 PF00512 His Kinase A (phospho-acceptor) domain LCG53_16165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_16165 PF08521 Two-component sensor kinase N-terminal LCG53_16170 PF18030 RimK PreATP-grasp domain LCG53_16170 PF08443 RimK-like ATP-grasp domain LCG53_16175 PF00478 IMP dehydrogenase / GMP reductase domain LCG53_16185 PF01132 Elongation factor P (EF-P) OB domain LCG53_16185 PF08207 Elongation factor P (EF-P) KOW-like domain LCG53_16185 PF09285 Elongation factor P, C-terminal LCG53_16190 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_16200 PF03180 NLPA lipoprotein LCG53_16205 PF03171 2OG-Fe(II) oxygenase superfamily LCG53_16205 PF14226 non-haem dioxygenase in morphine synthesis N-terminal LCG53_16215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LCG53_16215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCG53_16225 PF17152 Periplasmic sensor domain LCG53_16225 PF00990 Diguanylate cyclase, GGDEF domain LCG53_16235 PF00990 Diguanylate cyclase, GGDEF domain LCG53_16240 PF13419 Haloacid dehalogenase-like hydrolase LCG53_16250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_16250 PF03466 LysR substrate binding domain LCG53_16255 PF00857 Isochorismatase family LCG53_16260 PF01494 FAD binding domain LCG53_16265 PF04055 Radical SAM superfamily LCG53_16265 PF01938 TRAM domain LCG53_16265 PF00919 Uncharacterized protein family UPF0004 LCG53_16270 PF02562 PhoH-like protein LCG53_16275 PF02130 Uncharacterized protein family UPF0054 LCG53_16280 PF00571 CBS domain LCG53_16280 PF03471 Transporter associated domain LCG53_16285 PF00795 Carbon-nitrogen hydrolase LCG53_16290 PF07295 Zinc-ribbon containing domain LCG53_16295 PF13603 Leucyl-tRNA synthetase, Domain 2 LCG53_16295 PF00133 tRNA synthetases class I (I, L, M and V) LCG53_16295 PF08264 Anticodon-binding domain of tRNA LCG53_16310 PF01467 Cytidylyltransferase-like LCG53_16320 PF02590 Predicted SPOUT methyltransferase LCG53_16325 PF00905 Penicillin binding protein transpeptidase domain LCG53_16325 PF03717 Penicillin-binding Protein dimerisation domain LCG53_16330 PF01098 Cell cycle protein LCG53_16335 PF13406 Transglycosylase SLT domain LCG53_16340 PF03330 Lytic transglycolase LCG53_16340 PF05036 Sporulation related domain LCG53_16345 PF00768 D-alanyl-D-alanine carboxypeptidase LCG53_16345 PF07943 Penicillin-binding protein 5, C-terminal domain LCG53_16350 PF04359 Protein of unknown function (DUF493) LCG53_16355 PF03099 Biotin/lipoate A/B protein ligase family LCG53_16360 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LCG53_16360 PF04055 Radical SAM superfamily LCG53_16370 PF02508 Rnf-Nqr subunit, membrane protein LCG53_16385 PF13411 MerR HTH family regulatory protein LCG53_16390 PF01368 DHH family LCG53_16390 PF02272 DHHA1 domain LCG53_16390 PF17768 RecJ OB domain LCG53_16400 PF01741 Large-conductance mechanosensitive channel, MscL LCG53_16405 PF02899 Phage integrase, N-terminal SAM-like domain LCG53_16405 PF00589 Phage integrase family LCG53_16410 PF00258 Flavodoxin LCG53_16415 PF01523 Putative modulator of DNA gyrase LCG53_16420 PF01523 Putative modulator of DNA gyrase LCG53_16430 PF17969 L,D-transpeptidase C-terminal domain LCG53_16430 PF03734 L,D-transpeptidase catalytic domain LCG53_16435 PF16325 Peptidase family U32 C-terminal domain LCG53_16435 PF01136 Peptidase family U32 LCG53_16440 PF12838 4Fe-4S dicluster domain LCG53_16445 PF06476 Protein of unknown function (DUF1090) LCG53_16450 PF02635 DsrE/DsrF-like family LCG53_16455 PF07690 Major Facilitator Superfamily LCG53_16460 PF00013 KH domain LCG53_16460 PF01138 3' exoribonuclease family, domain 1 LCG53_16460 PF03725 3' exoribonuclease family, domain 2 LCG53_16460 PF00575 S1 RNA binding domain LCG53_16460 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LCG53_16465 PF00312 Ribosomal protein S15 LCG53_16470 PF09157 Pseudouridine synthase II TruB, C-terminal LCG53_16470 PF16198 tRNA pseudouridylate synthase B C-terminal domain LCG53_16470 PF01509 TruB family pseudouridylate synthase (N terminal domain) LCG53_16475 PF02033 Ribosome-binding factor A LCG53_16480 PF00009 Elongation factor Tu GTP binding domain LCG53_16480 PF11987 Translation-initiation factor 2 LCG53_16480 PF08364 Bacterial translation initiation factor IF-2 associated region LCG53_16480 PF04760 Translation initiation factor IF-2, N-terminal region LCG53_16485 PF00575 S1 RNA binding domain LCG53_16485 PF08529 NusA N-terminal domain LCG53_16485 PF13184 NusA-like KH domain LCG53_16490 PF17384 RimP C-terminal SH3 domain LCG53_16490 PF02576 RimP N-terminal domain LCG53_16505 PF03840 Preprotein translocase SecG subunit LCG53_16510 PF00121 Triosephosphate isomerase LCG53_16515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LCG53_16515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LCG53_16515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LCG53_16515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LCG53_16520 PF00809 Pterin binding enzyme LCG53_16525 PF01434 Peptidase family M41 LCG53_16525 PF06480 FtsH Extracellular LCG53_16525 PF00004 ATPase family associated with various cellular activities (AAA) LCG53_16525 PF17862 AAA+ lid domain LCG53_16530 PF01728 FtsJ-like methyltransferase LCG53_16535 PF01985 CRS1 / YhbY (CRM) domain LCG53_16545 PF01272 Transcription elongation factor, GreA/GreB, C-term LCG53_16545 PF03449 Transcription elongation factor, N-terminal LCG53_16550 PF13677 Membrane MotB of proton-channel complex MotA/MotB LCG53_16550 PF00691 OmpA family LCG53_16555 PF01618 MotA/TolQ/ExbB proton channel family LCG53_16560 PF02609 Exonuclease VII small subunit LCG53_16565 PF00348 Polyprenyl synthetase LCG53_16570 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LCG53_16570 PF02779 Transketolase, pyrimidine binding domain LCG53_16570 PF02780 Transketolase, C-terminal domain LCG53_16575 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_16575 PF12911 N-terminal TM domain of oligopeptide transport permease C LCG53_16580 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_16585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCG53_16590 PF00005 ABC transporter LCG53_16590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCG53_16595 PF04608 Phosphatidylglycerophosphatase A LCG53_16600 PF00586 AIR synthase related protein, N-terminal domain LCG53_16600 PF02769 AIR synthase related protein, C-terminal domain LCG53_16605 PF01029 NusB family LCG53_16610 PF00885 6,7-dimethyl-8-ribityllumazine synthase LCG53_16615 PF00925 GTP cyclohydrolase II LCG53_16615 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LCG53_16620 PF00677 Lumazine binding domain LCG53_16625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LCG53_16625 PF01872 RibD C-terminal domain LCG53_16630 PF03477 ATP cone domain LCG53_16650 PF00580 UvrD/REP helicase N-terminal domain LCG53_16650 PF13361 UvrD-like helicase C-terminal domain LCG53_16660 PF13657 HipA N-terminal domain LCG53_16660 PF07804 HipA-like C-terminal domain LCG53_16690 PF00464 Serine hydroxymethyltransferase LCG53_16700 PF02613 Nitrate reductase delta subunit LCG53_16710 PF00990 Diguanylate cyclase, GGDEF domain LCG53_16710 PF03707 Bacterial signalling protein N terminal repeat LCG53_16710 PF00563 EAL domain LCG53_16715 PF16177 Acetyl-coenzyme A synthetase N-terminus LCG53_16715 PF00501 AMP-binding enzyme LCG53_16715 PF13193 AMP-binding enzyme C-terminal domain LCG53_16720 PF01220 Dehydroquinase class II LCG53_16725 PF00364 Biotin-requiring enzyme LCG53_16730 PF02785 Biotin carboxylase C-terminal domain LCG53_16730 PF00289 Biotin carboxylase, N-terminal domain LCG53_16730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LCG53_16735 PF06196 Protein of unknown function (DUF997) LCG53_16740 PF00474 Sodium:solute symporter family LCG53_16745 PF02378 Phosphotransferase system, EIIC LCG53_16745 PF00367 phosphotransferase system, EIIB LCG53_16745 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LCG53_16750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_16750 PF03466 LysR substrate binding domain LCG53_16755 PF08240 Alcohol dehydrogenase GroES-like domain LCG53_16755 PF00107 Zinc-binding dehydrogenase LCG53_16765 PF00132 Bacterial transferase hexapeptide (six repeats) LCG53_16765 PF12464 Maltose acetyltransferase LCG53_16780 PF00881 Nitroreductase family LCG53_16785 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LCG53_16785 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCG53_16790 PF01343 Peptidase family S49 LCG53_16805 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LCG53_16805 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LCG53_16810 PF07023 Protein of unknown function (DUF1315) LCG53_16815 PF17763 Glutaminase/Asparaginase C-terminal domain LCG53_16815 PF00710 Asparaginase, N-terminal LCG53_16820 PF03616 Sodium/glutamate symporter LCG53_16825 PF00672 HAMP domain LCG53_16825 PF02743 Cache domain LCG53_16825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_16835 PF00152 tRNA synthetases class II (D, K and N) LCG53_16835 PF01336 OB-fold nucleic acid binding domain LCG53_16840 PF02567 Phenazine biosynthesis-like protein LCG53_16845 PF00667 FAD binding domain LCG53_16845 PF00258 Flavodoxin LCG53_16845 PF00175 Oxidoreductase NAD-binding domain LCG53_16850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LCG53_16850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LCG53_16855 PF01507 Phosphoadenosine phosphosulfate reductase family LCG53_16860 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LCG53_16865 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_16870 PF00571 CBS domain LCG53_16870 PF00005 ABC transporter LCG53_16875 PF00186 Dihydrofolate reductase LCG53_16880 PF12821 Threonine/Serine exporter, ThrE LCG53_16885 PF06738 Putative threonine/serine exporter LCG53_16895 PF00994 Probable molybdopterin binding domain LCG53_16915 PF00194 Eukaryotic-type carbonic anhydrase LCG53_16920 PF04227 Indigoidine synthase A like protein LCG53_16925 PF00294 pfkB family carbohydrate kinase LCG53_16930 PF13806 Rieske-like [2Fe-2S] domain LCG53_16930 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCG53_16930 PF18267 Rubredoxin NAD+ reductase C-terminal domain LCG53_16930 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LCG53_16930 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LCG53_16930 PF04324 BFD-like [2Fe-2S] binding domain LCG53_16935 PF04324 BFD-like [2Fe-2S] binding domain LCG53_16935 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LCG53_16935 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LCG53_16935 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCG53_16935 PF13806 Rieske-like [2Fe-2S] domain LCG53_16935 PF18267 Rubredoxin NAD+ reductase C-terminal domain LCG53_16940 PF00005 ABC transporter LCG53_16945 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_16950 PF00005 ABC transporter LCG53_16960 PF10414 Sirohaem synthase dimerisation region LCG53_16960 PF14824 Sirohaem biosynthesis protein central LCG53_16960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCG53_16965 PF01568 Molydopterin dinucleotide binding domain LCG53_16965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LCG53_16965 PF04324 BFD-like [2Fe-2S] binding domain LCG53_16965 PF00384 Molybdopterin oxidoreductase LCG53_16980 PF00582 Universal stress protein family LCG53_16990 PF00171 Aldehyde dehydrogenase family LCG53_16995 PF01472 PUA domain LCG53_16995 PF00696 Amino acid kinase family LCG53_17000 PF07417 Sigma factor-binding transcriptional regulator Crl LCG53_17005 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LCG53_17010 PF00156 Phosphoribosyl transferase domain LCG53_17015 PF07687 Peptidase dimerisation domain LCG53_17015 PF01546 Peptidase family M20/M25/M40 LCG53_17020 PF00005 ABC transporter LCG53_17020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCG53_17025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCG53_17025 PF00005 ABC transporter LCG53_17030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCG53_17035 PF12911 N-terminal TM domain of oligopeptide transport permease C LCG53_17035 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_17040 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_17045 PF07715 TonB-dependent Receptor Plug Domain LCG53_17045 PF00593 TonB dependent receptor LCG53_17055 PF01618 MotA/TolQ/ExbB proton channel family LCG53_17060 PF01618 MotA/TolQ/ExbB proton channel family LCG53_17065 PF02472 Biopolymer transport protein ExbD/TolR LCG53_17080 PF06483 Chitinase C LCG53_17080 PF00704 Glycosyl hydrolases family 18 LCG53_17115 PF00749 tRNA synthetases class I (E and Q), catalytic domain LCG53_17120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_17120 PF00672 HAMP domain LCG53_17130 PF00313 'Cold-shock' DNA-binding domain LCG53_17170 PF00929 Exonuclease LCG53_17175 PF03193 RsgA GTPase LCG53_17180 PF02666 Phosphatidylserine decarboxylase LCG53_17185 PF09905 DNA-binding protein VF530 LCG53_17205 PF00563 EAL domain LCG53_17205 PF03707 Bacterial signalling protein N terminal repeat LCG53_17205 PF00990 Diguanylate cyclase, GGDEF domain LCG53_17210 PF06877 Regulator of ribonuclease activity B LCG53_17230 PF00561 alpha/beta hydrolase fold LCG53_17235 PF00664 ABC transporter transmembrane region LCG53_17235 PF00005 ABC transporter LCG53_17240 PF06004 Bacterial protein of unknown function (DUF903) LCG53_17245 PF00581 Rhodanese-like domain LCG53_17250 PF04960 Glutaminase LCG53_17255 PF04320 Protein with unknown function (DUF469) LCG53_17260 PF02390 Putative methyltransferase LCG53_17265 PF04389 Peptidase family M28 LCG53_17265 PF01483 Proprotein convertase P-domain LCG53_17270 PF00155 Aminotransferase class I and II LCG53_17275 PF12792 CSS motif domain associated with EAL LCG53_17275 PF00563 EAL domain LCG53_17280 PF08338 Domain of unknown function (DUF1731) LCG53_17280 PF01370 NAD dependent epimerase/dehydratase family LCG53_17290 PF00005 ABC transporter LCG53_17295 PF13472 GDSL-like Lipase/Acylhydrolase family LCG53_17300 PF00072 Response regulator receiver domain LCG53_17300 PF01584 CheW-like domain LCG53_17305 PF00267 Gram-negative porin LCG53_17310 PF00571 CBS domain LCG53_17310 PF00478 IMP dehydrogenase / GMP reductase domain LCG53_17315 PF00005 ABC transporter LCG53_17315 PF12848 ABC transporter LCG53_17325 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LCG53_17335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_17335 PF03466 LysR substrate binding domain LCG53_17340 PF02525 Flavodoxin-like fold LCG53_17375 PF13411 MerR HTH family regulatory protein LCG53_17385 PF00474 Sodium:solute symporter family LCG53_17390 PF17969 L,D-transpeptidase C-terminal domain LCG53_17390 PF03734 L,D-transpeptidase catalytic domain LCG53_17395 PF00924 Mechanosensitive ion channel LCG53_17400 PF00871 Acetokinase family LCG53_17405 PF04074 YhcH/YjgK/YiaL LCG53_17415 PF13302 Acetyltransferase (GNAT) domain LCG53_17420 PF13302 Acetyltransferase (GNAT) domain LCG53_17425 PF04151 Bacterial pre-peptidase C-terminal domain LCG53_17425 PF02868 Thermolysin metallopeptidase, alpha-helical domain LCG53_17425 PF01447 Thermolysin metallopeptidase, catalytic domain LCG53_17425 PF03413 Peptidase propeptide and YPEB domain LCG53_17425 PF07504 Fungalysin/Thermolysin Propeptide Motif LCG53_17430 PF03466 LysR substrate binding domain LCG53_17430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_17435 PF07690 Major Facilitator Superfamily LCG53_17445 PF06826 Predicted Permease Membrane Region LCG53_17445 PF02080 TrkA-C domain LCG53_17450 PF03006 Haemolysin-III related LCG53_17455 PF00282 Pyridoxal-dependent decarboxylase conserved domain LCG53_17460 PF04279 Intracellular septation protein A LCG53_17465 PF03795 YCII-related domain LCG53_17470 PF00459 Inositol monophosphatase family LCG53_17480 PF00483 Nucleotidyl transferase LCG53_17485 PF00854 POT family LCG53_17490 PF00072 Response regulator receiver domain LCG53_17520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCG53_17530 PF01207 Dihydrouridine synthase (Dus) LCG53_17535 PF02954 Bacterial regulatory protein, Fis family LCG53_17550 PF13438 Domain of unknown function (DUF4113) LCG53_17550 PF00817 impB/mucB/samB family LCG53_17550 PF11799 impB/mucB/samB family C-terminal domain LCG53_17555 PF02321 Outer membrane efflux protein LCG53_17560 PF00873 AcrB/AcrD/AcrF family LCG53_17565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCG53_17565 PF00529 HlyD membrane-fusion protein of T1SS LCG53_17570 PF01609 Transposase DDE domain LCG53_17570 PF05598 Transposase domain (DUF772) LCG53_17610 PF00717 Peptidase S24-like LCG53_17625 PF18766 SWI2/SNF2 ATPase LCG53_17625 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LCG53_17625 PF11867 Domain of unknown function (DUF3387) LCG53_17630 PF02661 Fic/DOC family LCG53_17630 PF13784 Fic/DOC family N-terminal LCG53_17640 PF01420 Type I restriction modification DNA specificity domain LCG53_17645 PF02384 N-6 DNA Methylase LCG53_17650 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A LCG53_17695 PF04002 RadC-like JAB domain LCG53_17750 PF05930 Prophage CP4-57 regulatory protein (AlpA) LCG53_17765 PF01810 LysE type translocator LCG53_17790 PF01521 Iron-sulphur cluster biosynthesis LCG53_17800 PF00654 Voltage gated chloride channel LCG53_17805 PF00202 Aminotransferase class-III LCG53_17820 PF01569 PAP2 superfamily LCG53_17830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_17830 PF03466 LysR substrate binding domain LCG53_17835 PF00893 Small Multidrug Resistance protein LCG53_17840 PF00893 Small Multidrug Resistance protein LCG53_17845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCG53_17850 PF00912 Transglycosylase LCG53_17850 PF00905 Penicillin binding protein transpeptidase domain LCG53_17850 PF14814 Bifunctional transglycosylase second domain LCG53_17855 PF00270 DEAD/DEAH box helicase LCG53_17855 PF08482 ATP-dependent helicase C-terminal LCG53_17855 PF00271 Helicase conserved C-terminal domain LCG53_17855 PF04408 Helicase associated domain (HA2) LCG53_17865 PF17746 SfsA N-terminal OB domain LCG53_17865 PF03749 Sugar fermentation stimulation protein RE domain LCG53_17870 PF01258 Prokaryotic dksA/traR C4-type zinc finger LCG53_17875 PF00749 tRNA synthetases class I (E and Q), catalytic domain LCG53_17880 PF01743 Poly A polymerase head domain LCG53_17880 PF12626 Polymerase A arginine-rich C-terminus LCG53_17880 PF12627 Probable RNA and SrmB- binding site of polymerase A LCG53_17885 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LCG53_17890 PF02548 Ketopantoate hydroxymethyltransferase LCG53_17895 PF02569 Pantoate-beta-alanine ligase LCG53_17905 PF01061 ABC-2 type transporter LCG53_17910 PF00005 ABC transporter LCG53_17915 PF00156 Phosphoribosyl transferase domain LCG53_17920 PF00440 Bacterial regulatory proteins, tetR family LCG53_17925 PF02441 Flavoprotein LCG53_17930 PF01225 Mur ligase family, catalytic domain LCG53_17930 PF02875 Mur ligase family, glutamate ligase domain LCG53_17930 PF08245 Mur ligase middle domain LCG53_17935 PF00719 Inorganic pyrophosphatase LCG53_17950 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LCG53_17965 PF00005 ABC transporter LCG53_18025 PF03600 Citrate transporter LCG53_18025 PF02080 TrkA-C domain LCG53_18030 PF00009 Elongation factor Tu GTP binding domain LCG53_18035 PF01507 Phosphoadenosine phosphosulfate reductase family LCG53_18040 PF10414 Sirohaem synthase dimerisation region LCG53_18040 PF14824 Sirohaem biosynthesis protein central LCG53_18040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCG53_18045 PF01145 SPFH domain / Band 7 family LCG53_18045 PF16200 C-terminal region of band_7 LCG53_18050 PF01957 NfeD-like C-terminal, partner-binding LCG53_18060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LCG53_18060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LCG53_18065 PF07690 Major Facilitator Superfamily LCG53_18070 PF01725 Ham1 family LCG53_18075 PF04055 Radical SAM superfamily LCG53_18075 PF06969 HemN C-terminal domain LCG53_18080 PF03889 Alternative ribosome-rescue factor A LCG53_18090 PF13411 MerR HTH family regulatory protein LCG53_18095 PF01808 AICARFT/IMPCHase bienzyme LCG53_18095 PF02142 MGS-like domain LCG53_18100 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LCG53_18100 PF02843 Phosphoribosylglycinamide synthetase, C domain LCG53_18100 PF02844 Phosphoribosylglycinamide synthetase, N domain LCG53_18115 PF00128 Alpha amylase, catalytic domain LCG53_18130 PF04539 Sigma-70 region 3 LCG53_18130 PF04545 Sigma-70, region 4 LCG53_18130 PF00140 Sigma-70 factor, region 1.2 LCG53_18130 PF04546 Sigma-70, non-essential region LCG53_18130 PF03979 Sigma-70 factor, region 1.1 LCG53_18130 PF04542 Sigma-70 region 2 LCG53_18135 PF08278 DNA primase DnaG DnaB-binding LCG53_18135 PF08275 DNA primase catalytic core, N-terminal domain LCG53_18135 PF10410 DnaB-helicase binding domain of primase LCG53_18135 PF01807 CHC2 zinc finger LCG53_18140 PF09424 Yqey-like protein LCG53_18145 PF01165 Ribosomal protein S21 LCG53_18150 PF00814 Glycoprotease family LCG53_18155 PF00140 Sigma-70 factor, region 1.2 LCG53_18155 PF04539 Sigma-70 region 3 LCG53_18155 PF04545 Sigma-70, region 4 LCG53_18155 PF04542 Sigma-70 region 2 LCG53_18160 PF01476 LysM domain LCG53_18160 PF01551 Peptidase family M23 LCG53_18165 PF09335 SNARE associated Golgi protein LCG53_18175 PF01975 Survival protein SurE LCG53_18180 PF01142 tRNA pseudouridine synthase D (TruD) LCG53_18185 PF02542 YgbB family LCG53_18190 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LCG53_18195 PF04977 Septum formation initiator LCG53_18200 PF00113 Enolase, C-terminal TIM barrel domain LCG53_18200 PF03952 Enolase, N-terminal domain LCG53_18205 PF06418 CTP synthase N-terminus LCG53_18205 PF00117 Glutamine amidotransferase class-I LCG53_18210 PF03819 MazG nucleotide pyrophosphohydrolase domain LCG53_18215 PF02824 TGS domain LCG53_18215 PF13291 ACT domain LCG53_18215 PF04607 Region found in RelA / SpoT proteins LCG53_18220 PF01938 TRAM domain LCG53_18220 PF05958 tRNA (Uracil-5-)-methyltransferase LCG53_18225 PF01627 Hpt domain LCG53_18225 PF00072 Response regulator receiver domain LCG53_18225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_18225 PF00512 His Kinase A (phospho-acceptor) domain LCG53_18225 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LCG53_18225 PF00672 HAMP domain LCG53_18230 PF07308 Protein of unknown function (DUF1456) LCG53_18235 PF01510 N-acetylmuramoyl-L-alanine amidase LCG53_18240 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LCG53_18245 PF02565 Recombination protein O C terminal LCG53_18245 PF11967 Recombination protein O N terminal LCG53_18250 PF01926 50S ribosome-binding GTPase LCG53_18250 PF07650 KH domain LCG53_18255 PF00035 Double-stranded RNA binding motif LCG53_18255 PF14622 Ribonuclease-III-like LCG53_18260 PF10502 Signal peptidase, peptidase S26 LCG53_18265 PF00679 Elongation factor G C-terminus LCG53_18265 PF00009 Elongation factor Tu GTP binding domain LCG53_18265 PF03144 Elongation factor Tu domain 2 LCG53_18265 PF06421 GTP-binding protein LepA C-terminus LCG53_18275 PF03888 MucB/RseB N-terminal domain LCG53_18275 PF17188 MucB/RseB C-terminal domain LCG53_18280 PF03872 Anti sigma-E protein RseA, N-terminal domain LCG53_18280 PF03873 Anti sigma-E protein RseA, C-terminal domain LCG53_18285 PF04542 Sigma-70 region 2 LCG53_18285 PF08281 Sigma-70, region 4 LCG53_18290 PF00890 FAD binding domain LCG53_18290 PF02910 Fumarate reductase flavoprotein C-term LCG53_18300 PF03937 Flavinator of succinate dehydrogenase LCG53_18305 PF01571 Aminomethyltransferase folate-binding domain LCG53_18310 PF03466 LysR substrate binding domain LCG53_18310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_18325 PF03091 CutA1 divalent ion tolerance protein LCG53_18330 PF11412 Disulphide bond corrector protein DsbC LCG53_18330 PF02683 Cytochrome C biogenesis protein transmembrane region LCG53_18345 PF01266 FAD dependent oxidoreductase LCG53_18350 PF01116 Fructose-bisphosphate aldolase class-II LCG53_18355 PF00162 Phosphoglycerate kinase LCG53_18360 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LCG53_18360 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LCG53_18365 PF00480 ROK family LCG53_18370 PF01208 Uroporphyrinogen decarboxylase (URO-D) LCG53_18375 PF00293 NUDIX domain LCG53_18375 PF09297 NADH pyrophosphatase zinc ribbon domain LCG53_18380 PF08239 Bacterial SH3 domain LCG53_18385 PF00520 Ion transport protein LCG53_18385 PF00027 Cyclic nucleotide-binding domain LCG53_18390 PF02743 Cache domain LCG53_18390 PF00672 HAMP domain LCG53_18390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_18400 PF08335 GlnD PII-uridylyltransferase LCG53_18400 PF03710 Glutamate-ammonia ligase adenylyltransferase LCG53_18415 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LCG53_18415 PF00326 Prolyl oligopeptidase family LCG53_18420 PF00291 Pyridoxal-phosphate dependent enzyme LCG53_18425 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_18430 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_18435 PF00005 ABC transporter LCG53_18440 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCG53_18445 PF13194 Domain of unknown function (DUF4010) LCG53_18450 PF14602 Hexapeptide repeat of succinyl-transferase LCG53_18450 PF12464 Maltose acetyltransferase LCG53_18490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_18490 PF03466 LysR substrate binding domain LCG53_18495 PF14698 Argininosuccinate lyase C-terminal LCG53_18495 PF00206 Lyase LCG53_18500 PF00764 Arginosuccinate synthase LCG53_18505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LCG53_18505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LCG53_18510 PF00696 Amino acid kinase family LCG53_18515 PF01118 Semialdehyde dehydrogenase, NAD binding domain LCG53_18515 PF02774 Semialdehyde dehydrogenase, dimerisation domain LCG53_18520 PF01546 Peptidase family M20/M25/M40 LCG53_18520 PF07687 Peptidase dimerisation domain LCG53_18525 PF00311 Phosphoenolpyruvate carboxylase LCG53_18530 PF00990 Diguanylate cyclase, GGDEF domain LCG53_18535 PF04073 Aminoacyl-tRNA editing domain LCG53_18555 PF00392 Bacterial regulatory proteins, gntR family LCG53_18555 PF00155 Aminotransferase class I and II LCG53_18570 PF03466 LysR substrate binding domain LCG53_18570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_18575 PF03788 LrgA family LCG53_18580 PF04172 LrgB-like family LCG53_18585 PF00696 Amino acid kinase family LCG53_18585 PF00742 Homoserine dehydrogenase LCG53_18585 PF03447 Homoserine dehydrogenase, NAD binding domain LCG53_18590 PF01053 Cys/Met metabolism PLP-dependent enzyme LCG53_18595 PF01340 Met Apo-repressor, MetJ LCG53_18605 PF01588 Putative tRNA binding domain LCG53_18610 PF03222 Tryptophan/tyrosine permease family LCG53_18615 PF00459 Inositol monophosphatase family LCG53_18620 PF00293 NUDIX domain LCG53_18625 PF13419 Haloacid dehalogenase-like hydrolase LCG53_18630 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LCG53_18635 PF03466 LysR substrate binding domain LCG53_18635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_18640 PF01479 S4 domain LCG53_18640 PF00579 tRNA synthetases class I (W and Y) LCG53_18645 PF00196 Bacterial regulatory proteins, luxR family LCG53_18650 PF01203 Type II secretion system (T2SS), protein N LCG53_18655 PF04612 Type II secretion system (T2SS), protein M LCG53_18660 PF12693 GspL periplasmic domain LCG53_18660 PF05134 Type II secretion system (T2SS), protein L LCG53_18665 PF03934 Type II secretion system (T2SS), protein K LCG53_18675 PF07963 Prokaryotic N-terminal methylation motif LCG53_18675 PF11612 Type II secretion system (T2SS), protein J LCG53_18680 PF07963 Prokaryotic N-terminal methylation motif LCG53_18680 PF02501 Type II secretion system (T2SS), protein I LCG53_18685 PF12019 Type II transport protein GspH LCG53_18685 PF07963 Prokaryotic N-terminal methylation motif LCG53_18690 PF07963 Prokaryotic N-terminal methylation motif LCG53_18690 PF08334 Type II secretion system (T2SS), protein G LCG53_18695 PF00482 Type II secretion system (T2SS), protein F LCG53_18700 PF00437 Type II/IV secretion system protein LCG53_18705 PF00263 Bacterial type II and III secretion system protein LCG53_18705 PF03958 Bacterial type II/III secretion system short domain LCG53_18710 PF11356 Type II secretion system protein C LCG53_18715 PF01479 S4 domain LCG53_18720 PF01430 Hsp33 protein LCG53_18725 PF01293 Phosphoenolpyruvate carboxykinase LCG53_18730 PF00392 Bacterial regulatory proteins, gntR family LCG53_18735 PF01321 Creatinase/Prolidase N-terminal domain LCG53_18735 PF00557 Metallopeptidase family M24 LCG53_18740 PF00583 Acetyltransferase (GNAT) family LCG53_18745 PF05433 Glycine zipper 2TM domain LCG53_18750 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 LCG53_18750 PF01610 Transposase LCG53_18750 PF13542 Helix-turn-helix domain of transposase family ISL3 LCG53_18755 PF01928 CYTH domain LCG53_18760 PF01865 Protein of unknown function DUF47 LCG53_18765 PF01384 Phosphate transporter family LCG53_18770 PF01966 HD domain LCG53_18770 PF01743 Poly A polymerase head domain LCG53_18770 PF12627 Probable RNA and SrmB- binding site of polymerase A LCG53_18775 PF13401 AAA domain LCG53_18775 PF01471 Putative peptidoglycan binding domain LCG53_18780 PF16537 Type II secretion system protein B LCG53_18785 PF10576 Iron-sulfur binding domain of endonuclease III LCG53_18785 PF00633 Helix-hairpin-helix motif LCG53_18785 PF00730 HhH-GPD superfamily base excision DNA repair protein LCG53_18785 PF14815 NUDIX domain LCG53_18790 PF04362 Bacterial Fe(2+) trafficking LCG53_18795 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LCG53_18795 PF01464 Transglycosylase SLT domain LCG53_18805 PF00657 GDSL-like Lipase/Acylhydrolase LCG53_18810 PF00691 OmpA family LCG53_18810 PF01389 OmpA-like transmembrane domain LCG53_18815 PF03886 ABC-type transport auxiliary lipoprotein component LCG53_18820 PF02470 MlaD protein LCG53_18825 PF04403 Paraquat-inducible protein A LCG53_18830 PF17209 Hfq protein LCG53_18835 PF13419 Haloacid dehalogenase-like hydrolase LCG53_18840 PF01590 GAF domain LCG53_18840 PF00360 Phytochrome region LCG53_18840 PF00990 Diguanylate cyclase, GGDEF domain LCG53_18840 PF00563 EAL domain LCG53_18845 PF00701 Dihydrodipicolinate synthetase family LCG53_18850 PF05175 Methyltransferase small domain LCG53_18850 PF08468 Methyltransferase small domain N-terminal LCG53_18855 PF00483 Nucleotidyl transferase LCG53_18860 PF08323 Starch synthase catalytic domain LCG53_18860 PF00534 Glycosyl transferases group 1 LCG53_18900 PF03553 Na+/H+ antiporter family LCG53_18905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_18905 PF03466 LysR substrate binding domain LCG53_18910 PF13416 Bacterial extracellular solute-binding protein LCG53_18915 PF00005 ABC transporter LCG53_18915 PF08402 TOBE domain LCG53_18920 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_18925 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_18930 PF00171 Aldehyde dehydrogenase family LCG53_18935 PF01040 UbiA prenyltransferase family LCG53_18960 PF00510 Cytochrome c oxidase subunit III LCG53_18965 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LCG53_18970 PF00115 Cytochrome C and Quinol oxidase polypeptide I LCG53_18975 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LCG53_18975 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LCG53_18980 PF13718 GNAT acetyltransferase 2 LCG53_18980 PF08351 Domain of unknown function (DUF1726) LCG53_18980 PF05127 Helicase LCG53_18980 PF17176 tRNA-binding domain LCG53_18995 PF00210 Ferritin-like domain LCG53_19000 PF02142 MGS-like domain LCG53_19015 PF17763 Glutaminase/Asparaginase C-terminal domain LCG53_19015 PF00710 Asparaginase, N-terminal LCG53_19030 PF00356 Bacterial regulatory proteins, lacI family LCG53_19035 PF00367 phosphotransferase system, EIIB LCG53_19035 PF02378 Phosphotransferase system, EIIC LCG53_19040 PF11941 Domain of unknown function (DUF3459) LCG53_19040 PF00128 Alpha amylase, catalytic domain LCG53_19045 PF12464 Maltose acetyltransferase LCG53_19045 PF14602 Hexapeptide repeat of succinyl-transferase LCG53_19050 PF01037 Lrp/AsnC ligand binding domain LCG53_19055 PF00892 EamA-like transporter family LCG53_19080 PF04222 Protein of unknown function (DUF416) LCG53_19085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCG53_19090 PF01476 LysM domain LCG53_19090 PF08525 Opacity-associated protein A N-terminal motif LCG53_19090 PF01551 Peptidase family M23 LCG53_19110 PF01297 Zinc-uptake complex component A periplasmic LCG53_19115 PF00005 ABC transporter LCG53_19120 PF00950 ABC 3 transport family LCG53_19125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_19125 PF03466 LysR substrate binding domain LCG53_19135 PF03167 Uracil DNA glycosylase superfamily LCG53_19140 PF00892 EamA-like transporter family LCG53_19145 PF01541 GIY-YIG catalytic domain LCG53_19160 PF04012 PspA/IM30 family LCG53_19165 PF01553 Acyltransferase LCG53_19185 PF00578 AhpC/TSA family LCG53_19195 PF00684 DnaJ central domain LCG53_19195 PF00226 DnaJ domain LCG53_19195 PF01556 DnaJ C terminal domain LCG53_19235 PF00521 DNA gyrase/topoisomerase IV, subunit A LCG53_19235 PF03989 DNA gyrase C-terminal domain, beta-propeller LCG53_19240 PF01751 Toprim domain LCG53_19240 PF00986 DNA gyrase B subunit, carboxyl terminus LCG53_19240 PF00204 DNA gyrase B LCG53_19240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_19245 PF04632 Fusaric acid resistance protein family LCG53_19250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCG53_19250 PF00529 HlyD membrane-fusion protein of T1SS LCG53_19255 PF07869 Protein of unknown function (DUF1656) LCG53_19265 PF00293 NUDIX domain LCG53_19270 PF05728 Uncharacterised protein family (UPF0227) LCG53_19275 PF00149 Calcineurin-like phosphoesterase LCG53_19280 PF06853 Protein of unknown function (DUF1249) LCG53_19285 PF00293 NUDIX domain LCG53_19290 PF02321 Outer membrane efflux protein LCG53_19295 PF00294 pfkB family carbohydrate kinase LCG53_19295 PF01467 Cytidylyltransferase-like LCG53_19300 PF03279 Bacterial lipid A biosynthesis acyltransferase LCG53_19305 PF02872 5'-nucleotidase, C-terminal domain LCG53_19305 PF00149 Calcineurin-like phosphoesterase LCG53_19310 PF01810 LysE type translocator LCG53_19315 PF03472 Autoinducer binding domain LCG53_19315 PF00196 Bacterial regulatory proteins, luxR family LCG53_19320 PF00765 Autoinducer synthase LCG53_19325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_19325 PF03466 LysR substrate binding domain LCG53_19330 PF00773 RNB domain LCG53_19330 PF17876 Cold shock domain LCG53_19330 PF08206 Ribonuclease B OB domain LCG53_19335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCG53_19335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LCG53_19335 PF02378 Phosphotransferase system, EIIC LCG53_19340 PF01232 Mannitol dehydrogenase Rossmann domain LCG53_19340 PF08125 Mannitol dehydrogenase C-terminal domain LCG53_19345 PF05068 Mannitol repressor LCG53_19350 PF03471 Transporter associated domain LCG53_19350 PF00999 Sodium/hydrogen exchanger family LCG53_19350 PF02080 TrkA-C domain LCG53_19365 PF01544 CorA-like Mg2+ transporter protein LCG53_19370 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LCG53_19385 PF07670 Nucleoside recognition LCG53_19385 PF07662 Na+ dependent nucleoside transporter C-terminus LCG53_19385 PF01773 Na+ dependent nucleoside transporter N-terminus LCG53_19390 PF00270 DEAD/DEAH box helicase LCG53_19390 PF03880 DbpA RNA binding domain LCG53_19390 PF00271 Helicase conserved C-terminal domain LCG53_19410 PF01040 UbiA prenyltransferase family LCG53_19415 PF00425 chorismate binding enzyme LCG53_19420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LCG53_19420 PF16582 Middle domain of thiamine pyrophosphate LCG53_19420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LCG53_19425 PF12697 Alpha/beta hydrolase family LCG53_19430 PF00378 Enoyl-CoA hydratase/isomerase LCG53_19435 PF13378 Enolase C-terminal domain-like LCG53_19440 PF00501 AMP-binding enzyme LCG53_19445 PF08453 Peptidase family M9 N-terminal LCG53_19445 PF01752 Collagenase LCG53_19450 PF02698 DUF218 domain LCG53_19455 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LCG53_19455 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LCG53_19465 PF00561 alpha/beta hydrolase fold LCG53_19485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCG53_19485 PF12793 Sugar transport-related sRNA regulator N-term LCG53_19495 PF01053 Cys/Met metabolism PLP-dependent enzyme LCG53_19505 PF00465 Iron-containing alcohol dehydrogenase LCG53_19520 PF00106 short chain dehydrogenase LCG53_19540 PF02308 MgtC family LCG53_19545 PF16657 Maltogenic Amylase, C-terminal domain LCG53_19545 PF02903 Alpha amylase, N-terminal ig-like domain LCG53_19545 PF00128 Alpha amylase, catalytic domain LCG53_19555 PF00884 Sulfatase LCG53_19560 PF01037 Lrp/AsnC ligand binding domain LCG53_19570 PF04204 Homoserine O-succinyltransferase LCG53_19580 PF00994 Probable molybdopterin binding domain LCG53_19580 PF02464 Competence-damaged protein LCG53_19585 PF04307 LexA-binding, inner membrane-associated putative hydrolase LCG53_19605 PF07722 Peptidase C26 LCG53_19615 PF13419 Haloacid dehalogenase-like hydrolase LCG53_19620 PF02899 Phage integrase, N-terminal SAM-like domain LCG53_19620 PF00589 Phage integrase family LCG53_19630 PF01678 Diaminopimelate epimerase LCG53_19635 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LCG53_19635 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LCG53_19645 PF01491 Frataxin-like domain LCG53_19650 PF02230 Phospholipase/Carboxylesterase LCG53_19655 PF01295 Adenylate cyclase, class-I LCG53_19655 PF12633 Adenylate cyclase NT domain LCG53_19660 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LCG53_19660 PF03900 Porphobilinogen deaminase, C-terminal domain LCG53_19665 PF02602 Uroporphyrinogen-III synthase HemD LCG53_19670 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LCG53_19675 PF07719 Tetratricopeptide repeat LCG53_19675 PF07219 HemY protein N-terminus LCG53_19685 PF01523 Putative modulator of DNA gyrase LCG53_19690 PF04751 Protein of unknown function (DUF615) LCG53_19700 PF04363 Protein of unknown function (DUF496) LCG53_19730 PF01381 Helix-turn-helix LCG53_19730 PF07883 Cupin domain LCG53_19735 PF03594 Benzoate membrane transport protein LCG53_19745 PF02219 Methylenetetrahydrofolate reductase LCG53_19760 PF00672 HAMP domain LCG53_19760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_19765 PF03922 OmpW family LCG53_19770 PF17760 UvrA interaction domain LCG53_19770 PF17755 UvrA DNA-binding domain LCG53_19770 PF00005 ABC transporter LCG53_19775 PF00196 Bacterial regulatory proteins, luxR family LCG53_19780 PF00436 Single-strand binding protein family LCG53_19815 PF14490 Helix-hairpin-helix containing domain LCG53_19815 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LCG53_19815 PF13538 UvrD-like helicase C-terminal domain LCG53_19830 PF07690 Major Facilitator Superfamily LCG53_19835 PF00440 Bacterial regulatory proteins, tetR family LCG53_19835 PF02909 Tetracyclin repressor-like, C-terminal domain LCG53_19850 PF01381 Helix-turn-helix LCG53_19855 PF13438 Domain of unknown function (DUF4113) LCG53_19855 PF00817 impB/mucB/samB family LCG53_19855 PF11799 impB/mucB/samB family C-terminal domain LCG53_19870 PF00313 'Cold-shock' DNA-binding domain LCG53_19875 PF00512 His Kinase A (phospho-acceptor) domain LCG53_19875 PF00672 HAMP domain LCG53_19875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_19880 PF00486 Transcriptional regulatory protein, C terminal LCG53_19880 PF00072 Response regulator receiver domain LCG53_19890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_19890 PF00672 HAMP domain LCG53_19900 PF08448 PAS fold LCG53_19900 PF00990 Diguanylate cyclase, GGDEF domain LCG53_19905 PF00543 Nitrogen regulatory protein P-II LCG53_19910 PF00909 Ammonium Transporter Family LCG53_19920 PF13538 UvrD-like helicase C-terminal domain LCG53_19925 PF00580 UvrD/REP helicase N-terminal domain LCG53_19925 PF13361 UvrD-like helicase C-terminal domain LCG53_19925 PF12705 PD-(D/E)XK nuclease superfamily LCG53_19930 PF17946 RecC C-terminal domain LCG53_19935 PF07681 DoxX LCG53_19940 PF17954 Quercetinase C-terminal cupin domain LCG53_19940 PF02678 Pirin LCG53_19950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_19950 PF03466 LysR substrate binding domain LCG53_19960 PF07702 UTRA domain LCG53_19960 PF00392 Bacterial regulatory proteins, gntR family LCG53_19975 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_19985 PF00005 ABC transporter LCG53_19985 PF08402 TOBE domain LCG53_19995 PF00072 Response regulator receiver domain LCG53_19995 PF00990 Diguanylate cyclase, GGDEF domain LCG53_20015 PF00583 Acetyltransferase (GNAT) family LCG53_20020 PF00199 Catalase LCG53_20020 PF06628 Catalase-related immune-responsive LCG53_20040 PF00293 NUDIX domain LCG53_20045 PF01594 AI-2E family transporter LCG53_20050 PF00106 short chain dehydrogenase LCG53_20055 PF04371 Porphyromonas-type peptidyl-arginine deiminase LCG53_20060 PF13416 Bacterial extracellular solute-binding protein LCG53_20065 PF00795 Carbon-nitrogen hydrolase LCG53_20070 PF04371 Porphyromonas-type peptidyl-arginine deiminase LCG53_20075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_20075 PF03466 LysR substrate binding domain LCG53_20080 PF00989 PAS fold LCG53_20080 PF02954 Bacterial regulatory protein, Fis family LCG53_20080 PF00158 Sigma-54 interaction domain LCG53_20085 PF00381 PTS HPr component phosphorylation site LCG53_20085 PF00391 PEP-utilising enzyme, mobile domain LCG53_20085 PF05524 PEP-utilising enzyme, N-terminal LCG53_20085 PF03610 PTS system fructose IIA component LCG53_20090 PF02734 DAK2 domain LCG53_20095 PF02733 Dak1 domain LCG53_20100 PF00860 Permease family LCG53_20105 PF03079 ARD/ARD' family LCG53_20140 PF00009 Elongation factor Tu GTP binding domain LCG53_20140 PF03144 Elongation factor Tu domain 2 LCG53_20140 PF03143 Elongation factor Tu C-terminal domain LCG53_20145 PF00679 Elongation factor G C-terminus LCG53_20145 PF14492 Elongation Factor G, domain II LCG53_20145 PF03764 Elongation factor G, domain IV LCG53_20145 PF00009 Elongation factor Tu GTP binding domain LCG53_20145 PF03144 Elongation factor Tu domain 2 LCG53_20150 PF00177 Ribosomal protein S7p/S5e LCG53_20155 PF00164 Ribosomal protein S12/S23 LCG53_20160 PF04077 DsrH like protein LCG53_20165 PF02635 DsrE/DsrF-like family LCG53_20170 PF02635 DsrE/DsrF-like family LCG53_20175 PF01042 Endoribonuclease L-PSP LCG53_20180 PF08348 YheO-like PAS domain LCG53_20180 PF13309 HTH domain LCG53_20185 PF04998 RNA polymerase Rpb1, domain 5 LCG53_20185 PF05000 RNA polymerase Rpb1, domain 4 LCG53_20185 PF04983 RNA polymerase Rpb1, domain 3 LCG53_20185 PF00623 RNA polymerase Rpb1, domain 2 LCG53_20185 PF04997 RNA polymerase Rpb1, domain 1 LCG53_20190 PF04560 RNA polymerase Rpb2, domain 7 LCG53_20190 PF00562 RNA polymerase Rpb2, domain 6 LCG53_20190 PF04565 RNA polymerase Rpb2, domain 3 LCG53_20190 PF04561 RNA polymerase Rpb2, domain 2 LCG53_20190 PF10385 RNA polymerase beta subunit external 1 domain LCG53_20190 PF04563 RNA polymerase beta subunit LCG53_20195 PF00542 Ribosomal protein L7/L12 C-terminal domain LCG53_20195 PF16320 Ribosomal protein L7/L12 dimerisation domain LCG53_20200 PF00466 Ribosomal protein L10 LCG53_20205 PF00687 Ribosomal protein L1p/L10e family LCG53_20210 PF00298 Ribosomal protein L11, RNA binding domain LCG53_20210 PF03946 Ribosomal protein L11, N-terminal domain LCG53_20215 PF02357 Transcription termination factor nusG LCG53_20215 PF00467 KOW motif LCG53_20220 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LCG53_20230 PF00009 Elongation factor Tu GTP binding domain LCG53_20230 PF03143 Elongation factor Tu C-terminal domain LCG53_20230 PF03144 Elongation factor Tu domain 2 LCG53_20245 PF00485 Phosphoribulokinase / Uridine kinase family LCG53_20250 PF08279 HTH domain LCG53_20250 PF02237 Biotin protein ligase C terminal domain LCG53_20250 PF03099 Biotin/lipoate A/B protein ligase family LCG53_20255 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LCG53_20255 PF01565 FAD binding domain LCG53_20260 PF02080 TrkA-C domain LCG53_20260 PF02254 TrkA-N domain LCG53_20265 PF02386 Cation transport protein LCG53_20270 PF01131 DNA topoisomerase LCG53_20270 PF01751 Toprim domain LCG53_20275 PF03264 NapC/NirT cytochrome c family, N-terminal region LCG53_20280 PF00384 Molybdopterin oxidoreductase LCG53_20280 PF18364 Molybdopterin oxidoreductase N-terminal domain LCG53_20280 PF01568 Molydopterin dinucleotide binding domain LCG53_20290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_20295 PF00486 Transcriptional regulatory protein, C terminal LCG53_20295 PF00072 Response regulator receiver domain LCG53_20310 PF01794 Ferric reductase like transmembrane component LCG53_20315 PF00174 Oxidoreductase molybdopterin binding domain LCG53_20320 PF06496 Protein of unknown function (DUF1097) LCG53_20325 PF00158 Sigma-54 interaction domain LCG53_20325 PF00072 Response regulator receiver domain LCG53_20335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_20335 PF00512 His Kinase A (phospho-acceptor) domain LCG53_20355 PF00571 CBS domain LCG53_20355 PF00478 IMP dehydrogenase / GMP reductase domain LCG53_20365 PF01037 Lrp/AsnC ligand binding domain LCG53_20370 PF03590 Aspartate-ammonia ligase LCG53_20385 PF03466 LysR substrate binding domain LCG53_20385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_20395 PF02861 Clp amino terminal domain, pathogenicity island component LCG53_20395 PF10431 C-terminal, D2-small domain, of ClpB protein LCG53_20395 PF07724 AAA domain (Cdc48 subfamily) LCG53_20395 PF00004 ATPase family associated with various cellular activities (AAA) LCG53_20395 PF17871 AAA lid domain LCG53_20400 PF02578 Multi-copper polyphenol oxidoreductase laccase LCG53_20405 PF00849 RNA pseudouridylate synthase LCG53_20405 PF01479 S4 domain LCG53_20410 PF13525 Outer membrane lipoprotein LCG53_20415 PF03313 Serine dehydratase alpha chain LCG53_20420 PF13309 HTH domain LCG53_20420 PF08348 YheO-like PAS domain LCG53_20425 PF02233 NAD(P) transhydrogenase beta subunit LCG53_20430 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LCG53_20430 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LCG53_20430 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LCG53_20435 PF00465 Iron-containing alcohol dehydrogenase LCG53_20440 PF06719 AraC-type transcriptional regulator N-terminus LCG53_20440 PF12833 Helix-turn-helix domain LCG53_20445 PF08212 Lipocalin-like domain LCG53_20455 PF00672 HAMP domain LCG53_20455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_20455 PF02743 Cache domain LCG53_20465 PF03466 LysR substrate binding domain LCG53_20465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_20485 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LCG53_20485 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LCG53_20490 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LCG53_20490 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LCG53_20495 PF01316 Arginine repressor, DNA binding domain LCG53_20495 PF02863 Arginine repressor, C-terminal domain LCG53_20500 PF03606 C4-dicarboxylate anaerobic carrier LCG53_20505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LCG53_20505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LCG53_20510 PF00696 Amino acid kinase family LCG53_20525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCG53_20525 PF02743 Cache domain LCG53_20525 PF00672 HAMP domain LCG53_20530 PF02653 Branched-chain amino acid transport system / permease component LCG53_20535 PF00005 ABC transporter LCG53_20540 PF13407 Periplasmic binding protein domain LCG53_20545 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LCG53_20545 PF00703 Glycosyl hydrolases family 2 LCG53_20545 PF16353 Domain of unknown function(DUF4981) LCG53_20545 PF02837 Glycosyl hydrolases family 2, sugar binding domain LCG53_20545 PF02929 Beta galactosidase small chain LCG53_20550 PF00356 Bacterial regulatory proteins, lacI family LCG53_20555 PF16363 GDP-mannose 4,6 dehydratase LCG53_20560 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LCG53_20560 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LCG53_20565 PF00288 GHMP kinases N terminal domain LCG53_20565 PF08544 GHMP kinases C terminal LCG53_20565 PF10509 Galactokinase galactose-binding signature LCG53_20570 PF01263 Aldose 1-epimerase LCG53_20575 PF00248 Aldo/keto reductase family LCG53_20580 PF02673 Bacitracin resistance protein BacA LCG53_20585 PF12973 ChrR Cupin-like domain LCG53_20590 PF04545 Sigma-70, region 4 LCG53_20590 PF04542 Sigma-70 region 2 LCG53_20600 PF03485 Arginyl tRNA synthetase N terminal domain LCG53_20600 PF05746 DALR anticodon binding domain LCG53_20600 PF00750 tRNA synthetases class I (R) LCG53_20610 PF00227 Proteasome subunit LCG53_20615 PF00004 ATPase family associated with various cellular activities (AAA) LCG53_20615 PF10431 C-terminal, D2-small domain, of ClpB protein LCG53_20615 PF07724 AAA domain (Cdc48 subfamily) LCG53_20620 PF07690 Major Facilitator Superfamily LCG53_20635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCG53_20640 PF00005 ABC transporter LCG53_20655 PF18267 Rubredoxin NAD+ reductase C-terminal domain LCG53_20655 PF04324 BFD-like [2Fe-2S] binding domain LCG53_20655 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LCG53_20655 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCG53_20655 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LCG53_20665 PF13806 Rieske-like [2Fe-2S] domain LCG53_20670 PF01226 Formate/nitrite transporter LCG53_20675 PF14824 Sirohaem biosynthesis protein central LCG53_20675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCG53_20675 PF10414 Sirohaem synthase dimerisation region LCG53_20680 PF03448 MgtE intracellular N domain LCG53_20680 PF01769 Divalent cation transporter LCG53_20680 PF00571 CBS domain LCG53_20685 PF03737 Aldolase/RraA LCG53_20690 PF02592 Putative vitamin uptake transporter LCG53_20700 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LCG53_20705 PF00034 Cytochrome c LCG53_20710 PF00271 Helicase conserved C-terminal domain LCG53_20710 PF16124 RecQ zinc-binding LCG53_20710 PF00570 HRDC domain LCG53_20710 PF00270 DEAD/DEAH box helicase LCG53_20710 PF09382 RQC domain LCG53_20715 PF00270 DEAD/DEAH box helicase LCG53_20715 PF09382 RQC domain LCG53_20715 PF16124 RecQ zinc-binding LCG53_20715 PF00570 HRDC domain LCG53_20715 PF00271 Helicase conserved C-terminal domain LCG53_20720 PF03061 Thioesterase superfamily LCG53_20735 PF03475 3-alpha domain LCG53_20735 PF03473 MOSC domain LCG53_20740 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_20745 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_20750 PF08402 TOBE domain LCG53_20750 PF00005 ABC transporter LCG53_20755 PF13416 Bacterial extracellular solute-binding protein LCG53_20760 PF13416 Bacterial extracellular solute-binding protein LCG53_20765 PF00202 Aminotransferase class-III LCG53_20770 PF00120 Glutamine synthetase, catalytic domain LCG53_20775 PF01258 Prokaryotic dksA/traR C4-type zinc finger LCG53_20790 PF05981 CreA protein LCG53_20795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LCG53_20795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCG53_20800 PF00012 Hsp70 protein LCG53_20815 PF02903 Alpha amylase, N-terminal ig-like domain LCG53_20815 PF00128 Alpha amylase, catalytic domain LCG53_20825 PF16221 winged helix-turn-helix LCG53_20825 PF09940 Domain of unknown function (DUF2172) LCG53_20825 PF16254 Domain of unknown function (DUF4910) LCG53_20860 PF05958 tRNA (Uracil-5-)-methyltransferase LCG53_20865 PF00072 Response regulator receiver domain LCG53_20865 PF00486 Transcriptional regulatory protein, C terminal LCG53_20870 PF00672 HAMP domain LCG53_20870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_20870 PF00512 His Kinase A (phospho-acceptor) domain LCG53_20880 PF03949 Malic enzyme, NAD binding domain LCG53_20880 PF00390 Malic enzyme, N-terminal domain LCG53_20885 PF11066 Protein of unknown function (DUF2867) LCG53_20885 PF13460 NAD(P)H-binding LCG53_20890 PF01197 Ribosomal protein L31 LCG53_20895 PF00270 DEAD/DEAH box helicase LCG53_20895 PF00271 Helicase conserved C-terminal domain LCG53_20895 PF17764 3′ DNA-binding domain (3′BD) LCG53_20895 PF18074 Primosomal protein N C-terminal domain LCG53_20895 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LCG53_20900 PF00440 Bacterial regulatory proteins, tetR family LCG53_20910 PF01389 OmpA-like transmembrane domain LCG53_20910 PF00691 OmpA family LCG53_20915 PF00585 C-terminal regulatory domain of Threonine dehydratase LCG53_20915 PF00291 Pyridoxal-phosphate dependent enzyme LCG53_20920 PF00920 Dehydratase family LCG53_20925 PF01063 Amino-transferase class IV LCG53_20935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LCG53_20935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LCG53_20935 PF00205 Thiamine pyrophosphate enzyme, central domain LCG53_20940 PF01078 Magnesium chelatase, subunit ChlI LCG53_20940 PF13335 Magnesium chelatase, subunit ChlI C-terminal LCG53_20945 PF01553 Acyltransferase LCG53_20950 PF01553 Acyltransferase LCG53_20955 PF04463 Protein of unknown function (DUF523) LCG53_20965 PF00857 Isochorismatase family LCG53_20970 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LCG53_20970 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LCG53_20975 PF01323 DSBA-like thioredoxin domain LCG53_20980 PF01636 Phosphotransferase enzyme family LCG53_20985 PF12801 4Fe-4S binding domain LCG53_20985 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LCG53_20985 PF13746 4Fe-4S dicluster domain LCG53_20990 PF06288 Protein of unknown function (DUF1040) LCG53_20995 PF00563 EAL domain LCG53_20995 PF01590 GAF domain LCG53_20995 PF00990 Diguanylate cyclase, GGDEF domain LCG53_20995 PF00360 Phytochrome region LCG53_21000 PF09278 MerR, DNA binding LCG53_21000 PF00376 MerR family regulatory protein LCG53_21005 PF00403 Heavy-metal-associated domain LCG53_21010 PF00156 Phosphoribosyl transferase domain LCG53_21015 PF03725 3' exoribonuclease family, domain 2 LCG53_21015 PF01138 3' exoribonuclease family, domain 1 LCG53_21020 PF03755 YicC-like family, N-terminal region LCG53_21020 PF08340 Domain of unknown function (DUF1732) LCG53_21030 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LCG53_21035 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LCG53_21040 PF00535 Glycosyl transferase family 2 LCG53_21045 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LCG53_21050 PF01467 Cytidylyltransferase-like LCG53_21055 PF04393 Protein of unknown function (DUF535) LCG53_21060 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LCG53_21060 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LCG53_21060 PF06827 Zinc finger found in FPG and IleRS LCG53_21070 PF00471 Ribosomal protein L33 LCG53_21075 PF00830 Ribosomal L28 family LCG53_21080 PF04002 RadC-like JAB domain LCG53_21085 PF04127 DNA / pantothenate metabolism flavoprotein LCG53_21085 PF02441 Flavoprotein LCG53_21090 PF00692 dUTPase LCG53_21095 PF00440 Bacterial regulatory proteins, tetR family LCG53_21110 PF00924 Mechanosensitive ion channel LCG53_21110 PF05552 Conserved TM helix LCG53_21120 PF00342 Phosphoglucose isomerase LCG53_21125 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LCG53_21125 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LCG53_21130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCG53_21130 PF03466 LysR substrate binding domain LCG53_21140 PF00583 Acetyltransferase (GNAT) family LCG53_21140 PF13380 CoA binding domain LCG53_21140 PF13607 Succinyl-CoA ligase like flavodoxin domain LCG53_21175 PF12724 Flavodoxin domain LCG53_21180 PF02386 Cation transport protein LCG53_21185 PF09186 Domain of unknown function (DUF1949) LCG53_21185 PF01205 Uncharacterized protein family UPF0029 LCG53_21190 PF00557 Metallopeptidase family M24 LCG53_21195 PF00501 AMP-binding enzyme LCG53_21195 PF13193 AMP-binding enzyme C-terminal domain LCG53_21200 PF00378 Enoyl-CoA hydratase/isomerase LCG53_21200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LCG53_21200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LCG53_21205 PF00108 Thiolase, N-terminal domain LCG53_21205 PF02803 Thiolase, C-terminal domain LCG53_21210 PF00072 Response regulator receiver domain LCG53_21210 PF00486 Transcriptional regulatory protein, C terminal LCG53_21215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_21215 PF00672 HAMP domain LCG53_21215 PF00512 His Kinase A (phospho-acceptor) domain LCG53_21220 PF01547 Bacterial extracellular solute-binding protein LCG53_21240 PF01206 Sulfurtransferase TusA LCG53_21245 PF01042 Endoribonuclease L-PSP LCG53_21250 PF00691 OmpA family LCG53_21250 PF13488 Glycine zipper LCG53_21260 PF00857 Isochorismatase family LCG53_21265 PF03352 Methyladenine glycosylase LCG53_21270 PF02091 Glycyl-tRNA synthetase alpha subunit LCG53_21275 PF05746 DALR anticodon binding domain LCG53_21275 PF02092 Glycyl-tRNA synthetase beta subunit LCG53_21290 PF01590 GAF domain LCG53_21290 PF00158 Sigma-54 interaction domain LCG53_21295 PF00301 Rubredoxin LCG53_21295 PF00258 Flavodoxin LCG53_21295 PF00753 Metallo-beta-lactamase superfamily LCG53_21300 PF18113 Rubredoxin binding C-terminal domain LCG53_21300 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCG53_21310 PF12801 4Fe-4S binding domain LCG53_21320 PF01212 Beta-eliminating lyase LCG53_21325 PF03222 Tryptophan/tyrosine permease family LCG53_21330 PF03222 Tryptophan/tyrosine permease family LCG53_21350 PF00360 Phytochrome region LCG53_21350 PF00990 Diguanylate cyclase, GGDEF domain LCG53_21350 PF01590 GAF domain LCG53_21350 PF00563 EAL domain LCG53_21360 PF00356 Bacterial regulatory proteins, lacI family LCG53_21365 PF13458 Periplasmic binding protein LCG53_21370 PF02653 Branched-chain amino acid transport system / permease component LCG53_21375 PF11862 Domain of unknown function (DUF3382) LCG53_21375 PF02653 Branched-chain amino acid transport system / permease component LCG53_21380 PF00005 ABC transporter LCG53_21380 PF12399 Branched-chain amino acid ATP-binding cassette transporter LCG53_21385 PF00005 ABC transporter LCG53_21395 PF01810 LysE type translocator LCG53_21400 PF00581 Rhodanese-like domain LCG53_21405 PF01694 Rhomboid family LCG53_21405 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LCG53_21410 PF12262 Bacterial virulence factor lipase N-terminal LCG53_21415 PF04380 Membrane fusogenic activity LCG53_21420 PF00175 Oxidoreductase NAD-binding domain LCG53_21425 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LCG53_21435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCG53_21435 PF07498 Rho termination factor, N-terminal domain LCG53_21435 PF07497 Rho termination factor, RNA-binding domain LCG53_21440 PF00085 Thioredoxin LCG53_21445 PF00271 Helicase conserved C-terminal domain LCG53_21445 PF00270 DEAD/DEAH box helicase LCG53_21450 PF02541 Ppx/GppA phosphatase family LCG53_21460 PF04445 Putative SAM-dependent methyltransferase LCG53_21465 PF00563 EAL domain LCG53_21465 PF00990 Diguanylate cyclase, GGDEF domain LCG53_21465 PF03707 Bacterial signalling protein N terminal repeat LCG53_21470 PF01432 Peptidase family M3 LCG53_21475 PF00490 Delta-aminolevulinic acid dehydratase LCG53_21480 PF01026 TatD related DNase LCG53_21485 PF00902 Sec-independent protein translocase protein (TatC) LCG53_21490 PF02416 mttA/Hcf106 family LCG53_21495 PF02416 mttA/Hcf106 family LCG53_21500 PF03109 ABC1 family LCG53_21505 PF02036 SCP-2 sterol transfer family LCG53_21510 PF01209 ubiE/COQ5 methyltransferase family LCG53_21515 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LCG53_21520 PF07969 Amidohydrolase family LCG53_21555 PF03544 Gram-negative bacterial TonB protein C-terminal LCG53_21560 PF02472 Biopolymer transport protein ExbD/TolR LCG53_21565 PF01618 MotA/TolQ/ExbB proton channel family LCG53_21570 PF01618 MotA/TolQ/ExbB proton channel family LCG53_21580 PF03472 Autoinducer binding domain LCG53_21580 PF00196 Bacterial regulatory proteins, luxR family LCG53_21585 PF01380 SIS domain LCG53_21590 PF08220 DeoR-like helix-turn-helix domain LCG53_21590 PF00455 DeoR C terminal sensor domain LCG53_21595 PF00486 Transcriptional regulatory protein, C terminal LCG53_21595 PF00072 Response regulator receiver domain LCG53_21600 PF00512 His Kinase A (phospho-acceptor) domain LCG53_21600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCG53_21600 PF00672 HAMP domain LCG53_21605 PF00905 Penicillin binding protein transpeptidase domain LCG53_21610 PF06123 Inner membrane protein CreD LCG53_21615 PF00132 Bacterial transferase hexapeptide (six repeats) LCG53_21615 PF12804 MobA-like NTP transferase domain LCG53_21615 PF14602 Hexapeptide repeat of succinyl-transferase LCG53_21620 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LCG53_21620 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LCG53_21625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCG53_21625 PF02874 ATP synthase alpha/beta family, beta-barrel domain LCG53_21630 PF00231 ATP synthase LCG53_21635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCG53_21635 PF00306 ATP synthase alpha/beta chain, C terminal domain LCG53_21635 PF02874 ATP synthase alpha/beta family, beta-barrel domain LCG53_21640 PF00213 ATP synthase delta (OSCP) subunit LCG53_21645 PF00430 ATP synthase B/B' CF(0) LCG53_21650 PF00137 ATP synthase subunit C LCG53_21655 PF00119 ATP synthase A chain LCG53_21665 PF17762 HTH domain found in ParB protein LCG53_21665 PF02195 ParB-like nuclease domain LCG53_21670 PF13614 AAA domain LCG53_21675 PF02527 rRNA small subunit methyltransferase G LCG53_21680 PF13932 GidA associated domain LCG53_21680 PF01134 Glucose inhibited division protein A LCG53_21685 PF00258 Flavodoxin LCG53_21690 PF00593 TonB dependent receptor LCG53_21690 PF07715 TonB-dependent Receptor Plug Domain LCG53_21695 PF00005 ABC transporter LCG53_21700 PF00005 ABC transporter LCG53_21705 PF01497 Periplasmic binding protein LCG53_21710 PF01032 FecCD transport family LCG53_21715 PF07804 HipA-like C-terminal domain LCG53_21715 PF13657 HipA N-terminal domain LCG53_21730 PF13495 Phage integrase, N-terminal SAM-like domain LCG53_21730 PF00589 Phage integrase family LCG53_21735 PF00186 Dihydrofolate reductase LCG53_21750 PF00893 Small Multidrug Resistance protein LCG53_21755 PF00809 Pterin binding enzyme LCG53_21770 PF03551 Transcriptional regulator PadR-like family LCG53_21780 PF13610 DDE domain LCG53_21795 PF01636 Phosphotransferase enzyme family LCG53_21800 PF13610 DDE domain LCG53_21805 PF01636 Phosphotransferase enzyme family LCG53_21810 PF13610 DDE domain LCG53_21815 PF01636 Phosphotransferase enzyme family LCG53_21820 PF13610 DDE domain LCG53_21845 PF04851 Type III restriction enzyme, res subunit LCG53_21845 PF00271 Helicase conserved C-terminal domain LCG53_21845 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) LCG53_21845 PF08463 EcoEI R protein C-terminal LCG53_21850 PF12161 HsdM N-terminal domain LCG53_21850 PF02384 N-6 DNA Methylase LCG53_21855 PF01420 Type I restriction modification DNA specificity domain LCG53_21895 PF02899 Phage integrase, N-terminal SAM-like domain LCG53_21895 PF00589 Phage integrase family LCG53_21900 PF12631 MnmE helical domain LCG53_21900 PF01926 50S ribosome-binding GTPase LCG53_21900 PF10396 GTP-binding protein TrmE N-terminus LCG53_21905 PF02096 60Kd inner membrane protein LCG53_21905 PF14849 YidC periplasmic domain LCG53_21910 PF01809 Putative membrane protein insertion efficiency factor LCG53_21915 PF00825 Ribonuclease P LCG53_21920 PF00468 Ribosomal protein L34 LCG53_21925 PF00005 ABC transporter LCG53_21930 PF00528 Binding-protein-dependent transport system inner membrane component LCG53_21935 PF00497 Bacterial extracellular solute-binding proteins, family 3